Query 018104
Match_columns 360
No_of_seqs 322 out of 1908
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 10:00:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018104.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018104hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tnx_A Papain; hydrolase, cyto 100.0 2.3E-86 7.9E-91 630.0 33.4 312 23-343 50-362 (363)
2 1pci_A Procaricain; zymogen, h 100.0 6.3E-85 2.2E-89 615.2 32.7 312 26-343 9-321 (322)
3 3qj3_A Cathepsin L-like protei 100.0 3.6E-83 1.2E-87 604.9 31.7 305 28-343 11-331 (331)
4 3qt4_A Cathepsin-L-like midgut 100.0 3.1E-82 1.1E-86 597.1 28.8 302 31-343 19-329 (329)
5 2c0y_A Procathepsin S; proenzy 100.0 2.7E-82 9.4E-87 595.9 27.4 302 32-343 5-315 (315)
6 1by8_A Protein (procathepsin K 100.0 4E-82 1.4E-86 594.5 28.4 301 33-343 5-314 (314)
7 1cs8_A Human procathepsin L; p 100.0 1.2E-81 4.1E-86 591.8 27.9 298 34-343 7-316 (316)
8 2o6x_A Procathepsin L1, secret 100.0 3.4E-80 1.2E-84 580.4 27.6 295 37-344 3-307 (310)
9 1xkg_A DER P I, major mite fec 100.0 6.4E-77 2.2E-81 557.5 25.9 286 38-345 7-304 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 7.7E-71 2.6E-75 536.4 25.5 280 53-342 135-434 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 4.8E-69 1.6E-73 507.2 19.8 279 56-349 2-318 (325)
12 2fo5_A Cysteine proteinase EP- 100.0 2.5E-67 8.5E-72 481.3 21.8 236 124-359 2-241 (262)
13 1cqd_A Protein (protease II); 100.0 9.3E-66 3.2E-70 461.5 25.1 218 125-345 2-219 (221)
14 1s4v_A Cysteine endopeptidase; 100.0 7.3E-66 2.5E-70 464.4 23.8 224 125-348 1-224 (229)
15 1ppo_A Protease omega; hydrola 100.0 1.1E-65 3.6E-70 459.6 24.2 216 126-344 1-216 (216)
16 1yal_A Chymopapain; hydrolase, 100.0 1.6E-65 5.3E-70 459.1 24.3 217 126-345 1-217 (218)
17 3p5u_A Actinidin; SAD, cystein 100.0 1.2E-65 4.1E-70 460.8 22.9 217 126-344 1-218 (220)
18 1iwd_A Ervatamin B; cysteine p 100.0 2.6E-65 9E-70 456.5 24.8 214 126-343 1-214 (215)
19 3pbh_A Procathepsin B; thiol p 100.0 3.7E-65 1.3E-69 479.8 22.4 263 65-343 11-314 (317)
20 2cio_A Papain; hydrolase/inhib 100.0 1.8E-64 6E-69 450.4 24.9 211 126-343 1-211 (212)
21 3u8e_A Papain-like cysteine pr 100.0 5.6E-65 1.9E-69 456.9 20.6 216 126-345 1-221 (222)
22 2bdz_A Mexicain; cysteine prot 100.0 2.8E-64 9.5E-69 449.6 24.0 213 126-345 1-213 (214)
23 2b1m_A SPE31; papain-like, sug 100.0 4.4E-64 1.5E-68 457.1 24.7 219 125-348 1-229 (246)
24 3ioq_A CMS1MS2; caricaceae, cy 100.0 2.4E-64 8.3E-69 450.0 22.0 212 126-344 1-212 (213)
25 1o0e_A Ervatamin C; plant cyst 100.0 8.1E-64 2.8E-68 444.7 23.6 207 126-343 1-207 (208)
26 3kwz_A Cathepsin K; enzyme inh 100.0 6.9E-64 2.4E-68 448.0 22.7 212 126-343 1-215 (215)
27 2oul_A Falcipain 2; cysteine p 100.0 9.4E-64 3.2E-68 454.0 23.2 216 123-343 15-240 (241)
28 3ovx_A Cathepsin S; hydrolase, 100.0 5.4E-64 1.8E-68 449.7 21.1 213 126-343 2-218 (218)
29 3bwk_A Cysteine protease falci 100.0 1.1E-63 3.6E-68 454.3 21.6 217 122-343 16-242 (243)
30 3f75_A Toxopain-2, cathepsin L 100.0 7.1E-64 2.4E-68 450.8 19.8 218 124-343 5-224 (224)
31 2xu3_A Cathepsin L1; hydrolase 100.0 3.4E-63 1.2E-67 444.9 22.4 213 126-343 1-220 (220)
32 3i06_A Cruzipain; autocatalyti 100.0 9.8E-63 3.4E-67 440.2 23.3 208 126-343 1-214 (215)
33 1m6d_A Cathepsin F, catsf; pap 100.0 8.2E-63 2.8E-67 440.4 22.7 208 126-343 1-213 (214)
34 8pch_A Cathepsin H; hydrolase, 100.0 4E-63 1.4E-67 444.6 20.3 212 126-344 1-219 (220)
35 3f5v_A DER P 1 allergen; aller 100.0 2.4E-62 8.3E-67 440.0 20.4 210 124-343 8-222 (222)
36 3cbj_A Cathepsin B; cathepsin 100.0 2.8E-58 9.7E-63 424.1 20.9 216 124-347 5-261 (266)
37 3qsd_A Cathepsin B-like peptid 100.0 7.1E-58 2.4E-62 418.9 20.6 210 125-342 2-252 (254)
38 1deu_A Procathepsin X; cystein 100.0 1.7E-57 5.7E-62 420.5 22.4 214 122-343 32-275 (277)
39 2wbf_X Serine-repeat antigen p 100.0 8.4E-53 2.9E-57 387.9 23.7 214 128-346 9-261 (265)
40 3ois_A Cysteine protease; alph 100.0 2.4E-50 8.2E-55 375.7 15.1 233 77-325 12-273 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 6.5E-42 2.2E-46 330.9 16.4 209 125-344 47-424 (453)
42 2e01_A Cysteine proteinase 1; 100.0 5.7E-41 2E-45 324.7 18.5 209 125-344 52-425 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 4.2E-36 1.4E-40 284.7 18.1 182 137-324 21-356 (383)
44 3f75_P Toxopain-2, cathepsin L 99.8 4.2E-19 1.4E-23 138.4 8.8 74 30-103 16-90 (106)
45 2l95_A Crammer, LP06209P; cyst 99.7 1.1E-17 3.9E-22 124.6 5.2 64 37-102 8-76 (80)
46 1pxv_A Cysteine protease; hydr 97.3 0.0058 2E-07 50.7 12.9 129 142-324 25-162 (183)
47 1cv8_A Staphopain; cysteine pr 97.2 0.013 4.4E-07 48.5 13.8 129 142-324 16-153 (174)
48 1x9y_A Cysteine proteinase; ha 97.1 0.0089 3E-07 54.9 13.6 129 142-324 201-338 (367)
49 3erv_A Putative C39-like pepti 92.7 0.45 1.5E-05 41.9 8.7 63 239-309 126-196 (236)
50 1dki_A Pyrogenic exotoxin B zy 61.4 18 0.00061 33.8 7.0 55 245-323 289-344 (371)
51 3bb7_A Interpain A; cysteine p 60.5 17 0.00058 33.2 6.6 59 246-323 239-298 (321)
52 4d8b_A Streptopain; papain fol 57.1 19 0.00064 31.9 6.0 55 245-323 171-226 (261)
53 1jb0_F Photosystem 1 reaction 42.6 18 0.00062 29.3 3.2 57 1-60 1-59 (164)
54 2r9f_A Calpain-1 catalytic sub 37.4 91 0.0031 28.5 7.6 72 246-322 211-312 (339)
55 1ziv_A Calpain 9; cysteine pro 28.0 1.6E+02 0.0055 26.8 7.6 72 246-322 210-312 (339)
56 1th5_A NIFU1; iron-sulfur clus 22.4 32 0.0011 24.1 1.3 27 138-166 37-63 (74)
No 1
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=2.3e-86 Score=629.98 Aligned_cols=312 Identities=42% Similarity=0.797 Sum_probs=273.5
Q ss_pred cCCccccCChhHHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHhhCCCCCCeEEecccCCCCChhhhhhccccc
Q 018104 23 DFHEKELESEEGLWDLYERWRSHH-TVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGS 101 (360)
Q Consensus 23 ~~~~~~~~~~~~~~~~f~~~~~~~-k~Y~~~~E~~~R~~if~~n~~~I~~~N~~~~s~~~g~N~fsD~t~~Ef~~~~~~~ 101 (360)
.++++++.+++.+.++|++||++| |.|.+.+|+.+|++||++|+++|++||+++.+|++|+|+|+|||.+||++++++.
T Consensus 50 ~y~~~dl~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~sy~~g~N~FaDlT~eEf~~~~~~~ 129 (363)
T 3tnx_A 50 GYSQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGS 129 (363)
T ss_dssp ----CCSSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSCCSEEECSCTTTTSCHHHHHHHHSCS
T ss_pred CCChhhhcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEeccccccCCHHHHHHHhccc
Confidence 356678889999999999999999 9999999999999999999999999999989999999999999999999988765
Q ss_pred cccccccccccCCCcccccCCCCCCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhh
Q 018104 102 KIKHHRMFQGTRGNGTFMYGKVTSIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC 181 (360)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc 181 (360)
......... ............+||++||||++|+||||||||.||||||||++++||+++++++++.+.||+|+|+||
T Consensus 130 ~~~~~~~~~--~~~~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC 207 (363)
T 3tnx_A 130 IAGNYTTTE--LSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDC 207 (363)
T ss_dssp SCSCCCCSS--SSSSCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHH
T ss_pred ccccccccc--cccccccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcc
Confidence 433221110 000011122335799999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcchhhHHHHHHHcCCCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHhCCeEEEE
Q 018104 182 DTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAI 261 (360)
Q Consensus 182 ~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~ 261 (360)
... +.||+||.+..|++|+.++ |+++|++|||.+.++.|...........+.++..++..++..++.++++|||+|++
T Consensus 208 ~~~-~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsvai 285 (363)
T 3tnx_A 208 DRR-SYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVL 285 (363)
T ss_dssp CTT-SCTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEEEE
T ss_pred cCC-CCCCCCCChHHHHhHHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHcCCcEEEE
Confidence 886 7899999999999999987 99999999999988877654433455677888888888999999999999999999
Q ss_pred ecCCcccccccCceEeCCCCCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceee
Q 018104 262 DAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYP 341 (360)
Q Consensus 262 ~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~ 341 (360)
++...+|++|++|||..+|+..++|||+|||||++ |||||||||++|||+|||||+|+.++..|+|||++.++||
T Consensus 286 ~a~~~~F~~Y~sGVy~~~~~~~lnHaV~iVGyG~~-----YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~yP 360 (363)
T 3tnx_A 286 EAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGPN-----YILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYP 360 (363)
T ss_dssp CCCSHHHHTEEEEEECCCCCSCCCEEEEEEEEETT-----EEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEEE
T ss_pred EecchhhhCCCCCEECCCCCCCCCeEEEEEEcCCC-----cEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeeec
Confidence 98778899999999999999899999999999975 9999999999999999999999988777899999999999
Q ss_pred ee
Q 018104 342 IK 343 (360)
Q Consensus 342 ~~ 343 (360)
+.
T Consensus 361 ik 362 (363)
T 3tnx_A 361 VK 362 (363)
T ss_dssp EC
T ss_pred cc
Confidence 85
No 2
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=6.3e-85 Score=615.18 Aligned_cols=312 Identities=46% Similarity=0.876 Sum_probs=272.6
Q ss_pred ccccCChhHHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHhhCCCCCCeEEecccCCCCChhhhhhcccccccc
Q 018104 26 EKELESEEGLWDLYERWRSHH-TVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIK 104 (360)
Q Consensus 26 ~~~~~~~~~~~~~f~~~~~~~-k~Y~~~~E~~~R~~if~~n~~~I~~~N~~~~s~~~g~N~fsD~t~~Ef~~~~~~~~~~ 104 (360)
+..+.+++++..+|++||++| |.|.+.+|+.+|++||++|+++|++||+++.+|++|+|+|+|||.+||++++++....
T Consensus 9 ~~~~~~e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~~~~g~N~FaDlt~eEf~~~~~g~~~~ 88 (322)
T 1pci_A 9 QDDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLID 88 (322)
T ss_dssp ---CTHHHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSCTTTTSCHHHHHHHHCCCBCC
T ss_pred cccccchHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCceEEecCccccCCHHHHHHHhcCCCCc
Confidence 345667788899999999999 9998899999999999999999999999878999999999999999999888765432
Q ss_pred ccccccccCCCcccccCCCCCCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCC
Q 018104 105 HHRMFQGTRGNGTFMYGKVTSIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD 184 (360)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~ 184 (360)
..+... ....+.......||++||||++|+||||||||.||||||||++++||++++++++..++||+|+|+||+.
T Consensus 89 ~~~~~~---~~~~~~~~~~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~- 164 (322)
T 1pci_A 89 ATIEQS---YDEEFINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER- 164 (322)
T ss_dssp CSSCCC---CSEECCCCCCCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT-
T ss_pred cccccc---cccccccccccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcC-
Confidence 221100 0001222233479999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCcchhhHHHHHHHcCCCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHhCCeEEEEecC
Q 018104 185 QNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAG 264 (360)
Q Consensus 185 ~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~ 264 (360)
.+.||+||++..|++|+.++ |+++|++|||.+.++.|.........+++.+|..++..++++|+++|.+|||+|+|+++
T Consensus 165 ~~~gC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~GPV~v~i~~~ 243 (322)
T 1pci_A 165 RSHGCKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESK 243 (322)
T ss_dssp TSCGGGCBCHHHHHHHHHHH-CBCBTTTSCCCSSCCCCTTTTCCSCCBCCCCEEECCSSBHHHHHHHHHHSCEEEEECTT
T ss_pred CCCCCCCCCHHHHHHHHHHh-CCCchhhCCCCCCCCCCCCCCCCCceEEEeeEEEeCCCcHHHHHHHHHHCCEEEEEecc
Confidence 48899999999999999998 89999999999999999876433456789999999888899999999889999999997
Q ss_pred CcccccccCceEeCCCCCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeee
Q 018104 265 SSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIK 343 (360)
Q Consensus 265 ~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~ 343 (360)
..+|++|++|||+++|+..++|||+|||||++ +|++|||||||||++||++|||||+|+.+...|.|||++.++||++
T Consensus 244 ~~~f~~Y~~Gvy~~~c~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~yp~~ 321 (322)
T 1pci_A 244 GRPFQLYKGGIFEGPCGTKVDGAVTAVGYGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 321 (322)
T ss_dssp CHHHHTEEEEEECCSCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEEECC
T ss_pred cccccccCCeEeCCCCCCCCCEEEEEEEEecc-CCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccceeEEEe
Confidence 67899999999988888888999999999998 7999999999999999999999999996444478999999999986
No 3
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=3.6e-83 Score=604.92 Aligned_cols=305 Identities=34% Similarity=0.627 Sum_probs=266.7
Q ss_pred ccCChhHHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHhhCCC----CCCeEEecccCCCCChhhhhhcccccc
Q 018104 28 ELESEEGLWDLYERWRSHH-TVSRSLDEKHKRFNVFKQNVMHVHQTNKM----DKPYKLKLNKFADMTNHEFASTYAGSK 102 (360)
Q Consensus 28 ~~~~~~~~~~~f~~~~~~~-k~Y~~~~E~~~R~~if~~n~~~I~~~N~~----~~s~~~g~N~fsD~t~~Ef~~~~~~~~ 102 (360)
....+..+..+|++||++| |.|.+.+|+.+|++||++|+++|++||++ +.+|++|+|+|+|||.+||++++++.+
T Consensus 11 ~~~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~ 90 (331)
T 3qj3_A 11 SALPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLI 90 (331)
T ss_dssp --CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCC
T ss_pred CCCCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccc
Confidence 3456788899999999999 99998899999999999999999999986 489999999999999999999887654
Q ss_pred ccccccccccCCCcccccC------CCCCCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCC--ccccC
Q 018104 103 IKHHRMFQGTRGNGTFMYG------KVTSIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNK--LVSLS 174 (360)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~------~~~~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~--~~~lS 174 (360)
........ . ..+... ...+||++||||++|+||||||||.||||||||++++||++++++++. .++||
T Consensus 91 ~~~~~~~~---~-~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LS 166 (331)
T 3qj3_A 91 MPADLHKN---G-IPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVS 166 (331)
T ss_dssp CCSSTTTT---C-EEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBC
T ss_pred cccccccc---C-cccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcC
Confidence 32211000 0 001111 234799999999999999999999999999999999999999999998 89999
Q ss_pred HHHHHhhcCCCCCCCCCcchhhHHHHHHHcCCCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHh
Q 018104 175 EQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAK 254 (360)
Q Consensus 175 ~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~ 254 (360)
+|+|+||+.. +.||+||++..|++|+.+++||++|++|||.+.++.|..... ....++.+|..++..++++|+++|.+
T Consensus 167 eQ~LvdC~~~-~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~~~e~~lk~al~~ 244 (331)
T 3qj3_A 167 EQQLVDCVPN-ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYDPN-QVAARLSGYVYLSGPDENMLADMVAT 244 (331)
T ss_dssp HHHHHHHCTT-SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCTT-SEEECCSEEEEESSCCHHHHHHHHHH
T ss_pred HHHHhhhccC-CCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCCcc-cceeEeeEEEEeCCCCHHHHHHHHHh
Confidence 9999999986 889999999999999999889999999999999999987653 45678999999988889999999965
Q ss_pred -CCeEEEEecCCcccccccCceEeC-CCC-CCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCC
Q 018104 255 -QPVSVAIDAGSSDFQFYSEGVFTG-ECG-TELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGL 331 (360)
Q Consensus 255 -gPV~v~~~~~~~~f~~y~~Giy~~-~~~-~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~ 331 (360)
|||+|+|++..+ |++|++|||.. .|+ ..++|||+|||||++ +|++|||||||||++||++|||||+|+.+ |.
T Consensus 245 ~GPV~v~i~a~~~-f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~ 319 (331)
T 3qj3_A 245 KGPVAVAFDADDP-FGSYSGGVYYNPTCETNKFTHAVLIVGYGNE-NGQDYWLVKNSWGDGWGLDGYFKIARNAN---NH 319 (331)
T ss_dssp HCCEEEEECCCTT-GGGEEEEEECCTTCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS---SG
T ss_pred CCCEEEEEEcccc-cccccCceEeCCCCCCCcCCEEEEEEEEecc-CCceEEEEEcCCCCCcCCCCEEEEEcCCC---Cc
Confidence 999999999844 99999999976 575 578999999999987 89999999999999999999999999953 56
Q ss_pred ccccccceeeee
Q 018104 332 CGIAMEASYPIK 343 (360)
Q Consensus 332 Cgi~~~~~~~~~ 343 (360)
|||++.++||++
T Consensus 320 CgI~~~~~~p~v 331 (331)
T 3qj3_A 320 CGIAGVASVPTL 331 (331)
T ss_dssp GGTTTSCEEEEC
T ss_pred cCcCCceeeeeC
Confidence 999999999985
No 4
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=3.1e-82 Score=597.06 Aligned_cols=302 Identities=39% Similarity=0.756 Sum_probs=261.3
Q ss_pred ChhHHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHhhCCC----CCCeEEecccCCCCChhhhhhccccccccc
Q 018104 31 SEEGLWDLYERWRSHH-TVSRSLDEKHKRFNVFKQNVMHVHQTNKM----DKPYKLKLNKFADMTNHEFASTYAGSKIKH 105 (360)
Q Consensus 31 ~~~~~~~~f~~~~~~~-k~Y~~~~E~~~R~~if~~n~~~I~~~N~~----~~s~~~g~N~fsD~t~~Ef~~~~~~~~~~~ 105 (360)
++..+...|++||++| |.|.+.+|+.+|++||++|+++|++||++ +.+|++|+|+|+|||.+||++ +++.++..
T Consensus 19 ~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~~~~ 97 (329)
T 3qt4_A 19 PKSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRGKAQ 97 (329)
T ss_dssp -CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHTCCC
T ss_pred CHHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCcccc
Confidence 4567888999999999 99988889999999999999999999984 489999999999999999998 76654321
Q ss_pred cccccccCCCcccccCCCCCCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCC-
Q 018104 106 HRMFQGTRGNGTFMYGKVTSIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD- 184 (360)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~- 184 (360)
...... .....+.... .+||++||||++ +||||||||.||||||||++++||+++++++++.++||+|+|+||+..
T Consensus 98 ~~~~~~-~~~~~~~~~~-~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~~~ 174 (329)
T 3qt4_A 98 KPKHPE-NLRMPYVSSK-KPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSSSY 174 (329)
T ss_dssp -------CCEEECCCCC-SCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGG
T ss_pred cccccc-cccccccCCc-cCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhcccc
Confidence 100000 0000111122 479999999999 999999999999999999999999999999999999999999999874
Q ss_pred CCCCCCCcchhhHHHHHHHcCCCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHh-CCeEEEEec
Q 018104 185 QNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAK-QPVSVAIDA 263 (360)
Q Consensus 185 ~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~~~ 263 (360)
++.||+||++..|++|+.++ |+++|++|||.+.++.|..... ....++.+|..++..++++|+++|.+ |||+|+|++
T Consensus 175 g~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~a 252 (329)
T 3qt4_A 175 GNAGCDGGWMDSAFSYIHDY-GIMSESAYPYEAQGDYCRFDSS-QSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAIDA 252 (329)
T ss_dssp TCCTTBCCCHHHHHHHHHHS-CBCBTTTSCCCSSCCCCCCCGG-GCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEEECC
T ss_pred CCCCCCCCChhHHHHHHHHc-CCCcHHHeeeecCCCCCCCCcc-cceEEeceEEEecCCCHHHHHHHHHhCCCEEEEEec
Confidence 57899999999999999999 9999999999999999987643 45678999999988889999999965 899999999
Q ss_pred CCcccccccCceEeC-CCC-CCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceee
Q 018104 264 GSSDFQFYSEGVFTG-ECG-TELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYP 341 (360)
Q Consensus 264 ~~~~f~~y~~Giy~~-~~~-~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~ 341 (360)
. .+|++|++|||.. .|. ..++|||+|||||++ +|++|||||||||++||++|||||+|+.+ |.|||++.++||
T Consensus 253 ~-~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~yp 327 (329)
T 3qt4_A 253 T-DELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSD-NGQDYWILKNSWGSGWGESGYWRQVRNYG---NNCGIATAASYP 327 (329)
T ss_dssp C-GGGTTEEEEEECCSSCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTTTCEEE
T ss_pred C-hhhhhccCceeecCCCCCCcCCEEEEEEEEEee-CCccEEEEEeCCCCcccCCcEEEEEeCCC---CccCCCCceeEe
Confidence 8 4899999999976 575 578999999999997 79999999999999999999999999953 569999999999
Q ss_pred ee
Q 018104 342 IK 343 (360)
Q Consensus 342 ~~ 343 (360)
++
T Consensus 328 ~v 329 (329)
T 3qt4_A 328 AL 329 (329)
T ss_dssp EC
T ss_pred eC
Confidence 85
No 5
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=2.7e-82 Score=595.91 Aligned_cols=302 Identities=39% Similarity=0.707 Sum_probs=261.4
Q ss_pred hhHHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHhhCCC---C-CCeEEecccCCCCChhhhhhcccccccccc
Q 018104 32 EEGLWDLYERWRSHH-TVSRSLDEKHKRFNVFKQNVMHVHQTNKM---D-KPYKLKLNKFADMTNHEFASTYAGSKIKHH 106 (360)
Q Consensus 32 ~~~~~~~f~~~~~~~-k~Y~~~~E~~~R~~if~~n~~~I~~~N~~---~-~s~~~g~N~fsD~t~~Ef~~~~~~~~~~~~ 106 (360)
+..+..+|++||++| |.|.+.+|+.+|++||++|+++|++||++ + .+|++|+|+|+|||.+||++++++.+....
T Consensus 5 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~~ 84 (315)
T 2c0y_A 5 DPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQ 84 (315)
T ss_dssp CGGGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCCG
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCcc
Confidence 446778999999999 99988889999999999999999999975 2 799999999999999999888776543221
Q ss_pred ccccccCCCcccccCCCCCCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhc-CC-
Q 018104 107 RMFQGTRGNGTFMYGKVTSIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCD-TD- 184 (360)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~-~~- 184 (360)
.. . . ..+......+||++||||++|+||||||||.||||||||++++||+++++++++.++||+|+|+||+ ..
T Consensus 85 ~~-~---~-~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~ 159 (315)
T 2c0y_A 85 WQ-R---N-ITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKY 159 (315)
T ss_dssp GG-S---C-BCC------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGG
T ss_pred cc-C---C-ccccCcccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhccccc
Confidence 10 0 0 0111111236999999999999999999999999999999999999999999999999999999998 42
Q ss_pred CCCCCCCcchhhHHHHHHHcCCCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHh-CCeEEEEec
Q 018104 185 QNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAK-QPVSVAIDA 263 (360)
Q Consensus 185 ~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~~~ 263 (360)
++.||+||++..|++|+.+++|+++|++|||.+.++.|..... ....++.+|..++..++++|+++|.+ |||+|+|++
T Consensus 160 ~~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~ 238 (315)
T 2c0y_A 160 GNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSK-YRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDA 238 (315)
T ss_dssp TCCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCGG-GEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECC
T ss_pred CCCCCCCCCHHHHHHHHHHhCCcCchhcCCCccCCCCcccCCc-ccccccCCeEEeCCCCHHHHHHHHHHcCCEEEEEec
Confidence 5889999999999999997569999999999999999986542 34578899999987789999999965 899999999
Q ss_pred CCcccccccCceEeCC-CCCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeee
Q 018104 264 GSSDFQFYSEGVFTGE-CGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPI 342 (360)
Q Consensus 264 ~~~~f~~y~~Giy~~~-~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~ 342 (360)
...+|++|++|||..+ |+..++|||+|||||++ +|++|||||||||++||++|||||+|+.. |.|||++.++||+
T Consensus 239 ~~~~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p~ 314 (315)
T 2c0y_A 239 RHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDL-NGKEYWLVKNSWGHNFGEEGYIRMARNKG---NHCGIASFPSYPE 314 (315)
T ss_dssp CSHHHHTEEEEEECCTTCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEE
T ss_pred CchhhhccCCCcccCCCCCCcCCEEEEEEEEeec-CCCcEEEEEcCCCCCcCCCcEEEEEcCCC---CccCcCceeEEee
Confidence 7668999999999875 88788999999999998 89999999999999999999999999852 5699999999997
Q ss_pred e
Q 018104 343 K 343 (360)
Q Consensus 343 ~ 343 (360)
+
T Consensus 315 ~ 315 (315)
T 2c0y_A 315 I 315 (315)
T ss_dssp C
T ss_pred C
Confidence 4
No 6
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=4e-82 Score=594.54 Aligned_cols=301 Identities=43% Similarity=0.753 Sum_probs=261.5
Q ss_pred hHHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHhhCCC---C-CCeEEecccCCCCChhhhhhccccccccccc
Q 018104 33 EGLWDLYERWRSHH-TVSRSLDEKHKRFNVFKQNVMHVHQTNKM---D-KPYKLKLNKFADMTNHEFASTYAGSKIKHHR 107 (360)
Q Consensus 33 ~~~~~~f~~~~~~~-k~Y~~~~E~~~R~~if~~n~~~I~~~N~~---~-~s~~~g~N~fsD~t~~Ef~~~~~~~~~~~~~ 107 (360)
.++..+|++||++| |.|.+.+|+.+|++||++|+++|++||++ + .+|++|+|+|+|||.+||++.+++.+.....
T Consensus 5 ~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~ 84 (314)
T 1by8_A 5 EILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSH 84 (314)
T ss_dssp CTHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSCC
T ss_pred HHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCccc
Confidence 35677899999999 99988899999999999999999999975 2 7999999999999999998887765432211
Q ss_pred cccccCCCcccccC-CCCCCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCC
Q 018104 108 MFQGTRGNGTFMYG-KVTSIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQN 186 (360)
Q Consensus 108 ~~~~~~~~~~~~~~-~~~~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~ 186 (360)
. . ....+... ....||++||||++|+||||||||.||||||||++++||+++++++++.++||+|+|+||+. ++
T Consensus 85 ~-~---~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~-~~ 159 (314)
T 1by8_A 85 S-R---SNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-EN 159 (314)
T ss_dssp C-C---SSSSSBCCCCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT-TS
T ss_pred c-c---CCccccccccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC-CC
Confidence 0 0 00011111 12239999999999999999999999999999999999999999999999999999999987 48
Q ss_pred CCCCCcchhhHHHHHHHcCCCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHh-CCeEEEEecCC
Q 018104 187 QGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAK-QPVSVAIDAGS 265 (360)
Q Consensus 187 ~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~~~~~ 265 (360)
.||+||++..|++|+.+++|+++|++|||.+.++.|..... ....++.+|..++..++++|+++|.+ |||+|+|++..
T Consensus 160 ~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~ 238 (314)
T 1by8_A 160 DGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPT-GKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASL 238 (314)
T ss_dssp CGGGCCCSHHHHHHHHHTTCBCBTTTSCCCSSCCCCCCCGG-GCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECCCS
T ss_pred CCCcCCCHHHHHHHHHHcCCcCcHhhCCCCCCCCCcCCCCc-cceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEeCh
Confidence 99999999999999996669999999999999999986542 34578899999987789999999965 89999999976
Q ss_pred cccccccCceEeCC-CCC-CCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeee
Q 018104 266 SDFQFYSEGVFTGE-CGT-ELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIK 343 (360)
Q Consensus 266 ~~f~~y~~Giy~~~-~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~ 343 (360)
.+|++|++|||..+ |+. .++|||+|||||++ +|++|||||||||++||++|||||+|+.. |.|||++.++||++
T Consensus 239 ~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p~~ 314 (314)
T 1by8_A 239 TSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIANLASFPKM 314 (314)
T ss_dssp HHHHTEEEECBCCTTCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBTTTSTBTTEEEECCSSS---CGGGTTSSCEEECC
T ss_pred HHhhhccCceecCCCCCCCCCCeEEEEEEEecc-CCceEEEEEcCCCCCcCcCCEEEEEcCCC---CcCCccCeeEEeeC
Confidence 78999999999875 775 78999999999998 89999999999999999999999999852 56999999999974
No 7
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=1.2e-81 Score=591.84 Aligned_cols=298 Identities=43% Similarity=0.846 Sum_probs=258.9
Q ss_pred HHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHhhCCC----CCCeEEecccCCCCChhhhhhcccccccccccc
Q 018104 34 GLWDLYERWRSHH-TVSRSLDEKHKRFNVFKQNVMHVHQTNKM----DKPYKLKLNKFADMTNHEFASTYAGSKIKHHRM 108 (360)
Q Consensus 34 ~~~~~f~~~~~~~-k~Y~~~~E~~~R~~if~~n~~~I~~~N~~----~~s~~~g~N~fsD~t~~Ef~~~~~~~~~~~~~~ 108 (360)
.+..+|++||++| |.| +.+|+.+|++||++|+++|++||++ +.+|++|+|+|+|||.+||++++++.++...+
T Consensus 7 ~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~- 84 (316)
T 1cs8_A 7 SLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR- 84 (316)
T ss_dssp GGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCS-
T ss_pred HHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCccc-
Confidence 4677899999999 999 8889999999999999999999975 47999999999999999999877765432211
Q ss_pred ccccCCCcccccCCCCCCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCC-CCC
Q 018104 109 FQGTRGNGTFMYGKVTSIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQ 187 (360)
Q Consensus 109 ~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~ 187 (360)
.. ..+......+||++||||++|+||||||||.||||||||++++||+++++++++.++||+|+|+||+.. ++.
T Consensus 85 ----~~-~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~ 159 (316)
T 1cs8_A 85 ----KG-KVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNE 159 (316)
T ss_dssp ----CC-EECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCC
T ss_pred ----cC-ccccCccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCC
Confidence 00 011111224699999999999999999999999999999999999999999999999999999999863 478
Q ss_pred CCCCcchhhHHHHHHHcCCCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHh-CCeEEEEecCCc
Q 018104 188 GCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAK-QPVSVAIDAGSS 266 (360)
Q Consensus 188 gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~~~~~~ 266 (360)
||+||++..|++|+.+++|+++|++|||.+.++.|..... ....++.+|..++. ++++|+++|.+ |||+|+|++..+
T Consensus 160 gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~i~~~~~ 237 (316)
T 1cs8_A 160 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPK-YSVANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHE 237 (316)
T ss_dssp GGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCGG-GEEECCCCEEECCS-CHHHHHHHHHHHCCEEEEECCCSH
T ss_pred CCCCCCHHHHHHHHHHhCCcCchhccCCCCCCCCcCCCCc-cceeEeccEEEeCC-CHHHHHHHHHhcCCEEEEEecCCh
Confidence 9999999999999985569999999999999999986542 34678899999987 89999999965 999999999756
Q ss_pred ccccccCceEeCC-CCC-CCCeEEEEEEee---ecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceee
Q 018104 267 DFQFYSEGVFTGE-CGT-ELNHGVAAVGYG---TTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYP 341 (360)
Q Consensus 267 ~f~~y~~Giy~~~-~~~-~~~Hav~iVGyg---~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~ 341 (360)
+|++|++|||..+ |+. .++|||+||||| ++++|++|||||||||++||++|||||+|+.+ |.|||++.++||
T Consensus 238 ~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p 314 (316)
T 1cs8_A 238 SFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASYP 314 (316)
T ss_dssp HHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEE
T ss_pred hhccccCceECCCCCCCCCCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCCC---CccCccceeeEe
Confidence 8999999999874 775 789999999999 54478999999999999999999999999852 569999999999
Q ss_pred ee
Q 018104 342 IK 343 (360)
Q Consensus 342 ~~ 343 (360)
++
T Consensus 315 ~~ 316 (316)
T 1cs8_A 315 TV 316 (316)
T ss_dssp CC
T ss_pred eC
Confidence 74
No 8
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=3.4e-80 Score=580.43 Aligned_cols=295 Identities=42% Similarity=0.785 Sum_probs=254.8
Q ss_pred HHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHhhCCC----CCCeEEecccCCCCChhhhhhcccc-cccccccccc
Q 018104 37 DLYERWRSHH-TVSRSLDEKHKRFNVFKQNVMHVHQTNKM----DKPYKLKLNKFADMTNHEFASTYAG-SKIKHHRMFQ 110 (360)
Q Consensus 37 ~~f~~~~~~~-k~Y~~~~E~~~R~~if~~n~~~I~~~N~~----~~s~~~g~N~fsD~t~~Ef~~~~~~-~~~~~~~~~~ 110 (360)
.+|++||++| |.|.+.+|+.+| +||++|+++|++||++ +.+|++|+|+|+|||.+||++++++ .........
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~- 80 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILS- 80 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGGSC-
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCcccccc-
Confidence 4799999999 999878899999 9999999999999975 4799999999999999999987776 432211100
Q ss_pred ccCCCcccccCCCCCCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCC-CCCCC
Q 018104 111 GTRGNGTFMYGKVTSIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGC 189 (360)
Q Consensus 111 ~~~~~~~~~~~~~~~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~gc 189 (360)
.. ..+..... +||++||||++|+||||||||.||||||||++++||++++++++..++||+|+|+||+.. ++.||
T Consensus 81 --~~-~~~~~~~~-~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC 156 (310)
T 2o6x_A 81 --HG-VPYEANNR-AVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGC 156 (310)
T ss_dssp --SS-EECCC-----CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGG
T ss_pred --cC-CccccccC-CCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCC
Confidence 00 01111122 699999999999999999999999999999999999999999999999999999999863 47899
Q ss_pred CCcchhhHHHHHHHcCCCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHH-hCCeEEEEecCCccc
Q 018104 190 NGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVA-KQPVSVAIDAGSSDF 268 (360)
Q Consensus 190 ~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f 268 (360)
+||++..|++|+.. +|+++|++|||.+.++.|..... ....++.+|..++..++++|+++|. .|||+|+|++. .+|
T Consensus 157 ~GG~~~~a~~yi~~-~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~-~~f 233 (310)
T 2o6x_A 157 GGGLMENAYQYLKQ-FGLETESSYPYTAVEGQCRYNKQ-LGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVE-SDF 233 (310)
T ss_dssp GCCCHHHHHHHHTT-SCBCBTTTSCCCSSCCCCCCCGG-GCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCC-HHH
T ss_pred CCCCHHHHHHHHHH-CCcCchhcCCCCCCCCCccCCCC-CCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecc-hhh
Confidence 99999999999995 59999999999999999986542 4568899999998778999999996 59999999998 689
Q ss_pred ccccCceEeC-CCCC-CCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeeec
Q 018104 269 QFYSEGVFTG-ECGT-ELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKK 344 (360)
Q Consensus 269 ~~y~~Giy~~-~~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~~ 344 (360)
++|++|||.. .|+. .++|||+|||||++ +|++|||||||||++||++|||||+|+.+ |.|||++.++||++.
T Consensus 234 ~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~Cgi~~~~~~p~~~ 307 (310)
T 2o6x_A 234 MMYRSGIYQSQTCSPLRVNHAVLAVGYGTQ-GGTDYWIVKNSWGLSWGERGYIRMVRNRG---NMCGIASLASLPMVA 307 (310)
T ss_dssp HTEEEEEECCSSCCTTCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSEEEEEEE
T ss_pred hhCCCceecCCCCCCCCCCEEEEEEEEecc-CCceEEEEEeCCCCccCCCcEEEEEcCCC---CcCCccceeeEEEee
Confidence 9999999975 5764 78999999999998 89999999999999999999999999852 569999999999873
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=6.4e-77 Score=557.49 Aligned_cols=286 Identities=27% Similarity=0.500 Sum_probs=246.1
Q ss_pred HHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHhhCCCCCCeEEecccCCCCChhhhhhccccccccccccccccCCCc
Q 018104 38 LYERWRSHH-TVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNG 116 (360)
Q Consensus 38 ~f~~~~~~~-k~Y~~~~E~~~R~~if~~n~~~I~~~N~~~~s~~~g~N~fsD~t~~Ef~~~~~~~~~~~~~~~~~~~~~~ 116 (360)
+|++||++| |.|.+.+|+.+|++||++|+++|++ |+ + |+|+|+|||.+||++++++....... ......
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~---~---g~N~F~Dlt~eEf~~~~~~~~~~~~~-~~~~~~-- 76 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG---G---AINHLSDLSLDEFKNRFLMSAEAFEH-LKTQFD-- 76 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC---C---CCCTTTTSCHHHHHHHHSBCHHHHHH-HHHHHC--
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc---C---CCCcccCCCHHHHHHHhcCCCCcccc-ccCCcc--
Confidence 599999999 9998889999999999999999999 75 2 99999999999999866653321110 000000
Q ss_pred cccc-----CCCCCCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCC
Q 018104 117 TFMY-----GKVTSIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNG 191 (360)
Q Consensus 117 ~~~~-----~~~~~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~G 191 (360)
+.. ....+||++||||++|+||||||||.||||||||++++||++++++++..++||+|+|+||+. ..||+|
T Consensus 77 -~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~--~~GC~G 153 (312)
T 1xkg_A 77 -LNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS--QHGCHG 153 (312)
T ss_dssp ------CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBC
T ss_pred -cccccccccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC--CCCCCC
Confidence 110 012379999999999999999999999999999999999999999999999999999999982 389999
Q ss_pred cchhhHHHHHHHcCCCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHh--CCeEEEEecCCc-cc
Q 018104 192 GLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAK--QPVSVAIDAGSS-DF 268 (360)
Q Consensus 192 G~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~--gPV~v~~~~~~~-~f 268 (360)
|++..|++|+.+. |+++|++|||.+.++.|. .. ....+++++|..++..++++|+++|.+ |||+|+|++... +|
T Consensus 154 G~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~-~~-~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f 230 (312)
T 1xkg_A 154 DTIPRGIEYIQHN-GVVQESYYRYVAREQSCR-RP-NAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAF 230 (312)
T ss_dssp CCHHHHHHHHHHH-CEEBGGGSCCCSSCCCCC-CC-SSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHH
T ss_pred CCHHHHHHHHHHc-CCCccccCCccCCCCCCC-CC-CCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEecccccc
Confidence 9999999999996 999999999999999998 43 245788999999987789999999965 899999999843 89
Q ss_pred ccccCceEeC-CCC-C-CCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeeecC
Q 018104 269 QFYSEGVFTG-ECG-T-ELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKKS 345 (360)
Q Consensus 269 ~~y~~Giy~~-~~~-~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~~~ 345 (360)
++|++|||.. .|+ . . +|||+|||||++ +|++|||||||||++||++|||||+|+ .|.|||++.++||++..
T Consensus 231 ~~Y~~GVy~~~~c~~~~~-~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~----~n~CgI~~~~~~~~~~~ 304 (312)
T 1xkg_A 231 RHYDGRTIIQRDNGYQPN-YHAVNIVGYSNA-QGVDYWIVRNSWDTNWGDNGYGYFAAN----IDLMMIEEYPYVVILGQ 304 (312)
T ss_dssp HTCCSSSCBCCCCSSCCE-EEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECS----SCGGGTTTCCEEEECTT
T ss_pred cccCCcEEcCCCCCCCcC-ceEEEEEEEecc-CCceEEEEEeCCCCcccCCcEEEEEcC----CCcccccceeEEeeccC
Confidence 9999999976 576 4 5 999999999998 899999999999999999999999998 36699999999998754
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=7.7e-71 Score=536.42 Aligned_cols=280 Identities=29% Similarity=0.528 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCCeEEe-cccCCCCChhhhhhccccccccccccccccCCCcccccCCCCCCCCcee
Q 018104 53 DEKHKRFNVFKQNVMHVHQTNKMDKPYKLK-LNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPPSVD 131 (360)
Q Consensus 53 ~E~~~R~~if~~n~~~I~~~N~~~~s~~~g-~N~fsD~t~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~D 131 (360)
.|+.+|++||++|+++|++||+++.+|++| +|+|+|||.+||++++++.+....+... ............+||++||
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~~~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~lP~s~D 212 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAIQKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKP--APLTAEIQQKILFLPTSWD 212 (441)
T ss_dssp -------------------------------------------------------------------------CCCSCEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHccCCceEeecccccccCCHHHHHHHhCCCccccccccc--CccccccccccccCCCCEE
Confidence 466899999999999999999988899998 8999999999999988764332211000 0000011123457999999
Q ss_pred cCCCC---CCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCcc--ccCHHHHHhhcCCCCCCCCCcchhhH-HHHHHHcC
Q 018104 132 WRKKG---SVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLV--SLSEQELVDCDTDQNQGCNGGLMELA-FEFIKKKG 205 (360)
Q Consensus 132 wr~~g---~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~--~lS~q~l~dc~~~~~~gc~GG~~~~a-~~~~~~~~ 205 (360)
||+++ +||||||||.||||||||++++||++++++++..+ .||+|+|+||+.. +.||+||++..+ ++|++++
T Consensus 213 wR~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~~-~~GC~GG~~~~aa~~yi~~~- 290 (441)
T 3pdf_A 213 WRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQY-AQGCEGGFPYLIAGKYAQDF- 290 (441)
T ss_dssp TTCBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHTTHHHHHT-
T ss_pred CCcCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhccC-CCCCCCCchhHHHHHHHHhc-
Confidence 99964 89999999999999999999999999999998765 5999999999875 899999999987 8999987
Q ss_pred CCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcC----CChHHHHHHHH-HhCCeEEEEecCCcccccccCceEeCCC
Q 018104 206 GVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVP----ANHEDALLKAV-AKQPVSVAIDAGSSDFQFYSEGVFTGEC 280 (360)
Q Consensus 206 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~----~~~~~~i~~~l-~~gPV~v~~~~~~~~f~~y~~Giy~~~~ 280 (360)
|+++|++|||.+.++.|..... .....+.+|..++ ..++++|+++| .+|||+|+|++. ++|++|++|||..++
T Consensus 291 Gi~tE~~yPY~~~~~~C~~~~~-~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~-~~F~~Y~sGVy~~~~ 368 (441)
T 3pdf_A 291 GLVEEACFPYTGTDSPCKMKED-CFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVY-DDFLHYKKGIYHHTG 368 (441)
T ss_dssp CBCBGGGSCCCSSCCCSCCCSS-CCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCC-GGGGGCCSSEECCC-
T ss_pred CCCcHHHeeecccCCCCCCccc-cceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEec-ccccccCCceEecCC
Confidence 9999999999999999987543 3456677887775 35788999998 569999999997 789999999997643
Q ss_pred C-------CCCCeEEEEEEeeec-CCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeee
Q 018104 281 G-------TELNHGVAAVGYGTT-LDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPI 342 (360)
Q Consensus 281 ~-------~~~~Hav~iVGyg~~-~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~ 342 (360)
. ..++|||+|||||++ .+|++|||||||||++||++|||||+|+. |.|||++.++++.
T Consensus 369 ~~~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~----n~CGI~s~~~a~~ 434 (441)
T 3pdf_A 369 LRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGT----DECAIESIAVAAT 434 (441)
T ss_dssp --CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTSCCEEEE
T ss_pred CCcccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCC----CccCCCCceEEee
Confidence 2 247999999999986 47899999999999999999999999995 5699999998875
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=4.8e-69 Score=507.25 Aligned_cols=279 Identities=27% Similarity=0.473 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHHHhhCCCC-CCeEEecc-cCCCCChhhhhhccccccccccc--cccccCCCccccc-CCCCCCCCce
Q 018104 56 HKRFNVFKQNVMHVHQTNKMD-KPYKLKLN-KFADMTNHEFASTYAGSKIKHHR--MFQGTRGNGTFMY-GKVTSIPPSV 130 (360)
Q Consensus 56 ~~R~~if~~n~~~I~~~N~~~-~s~~~g~N-~fsD~t~~Ef~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~lP~~~ 130 (360)
+.|+..+..+.++|++||+++ .+|++|+| +|+|||.+||++++. ..+.+.. .... . .+.. ....+||++|
T Consensus 2 ~~~~~a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~~~~~g-~~~~~~~~~~~~~-~---~~~~~~~~~~lP~s~ 76 (325)
T 3hhi_A 2 LVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLNG-VIKKNNNASILPK-R---RFTEEEARAPLPSSF 76 (325)
T ss_dssp -------------------------------------------------------CCSCB-C---CCCHHHHHCCCCSCE
T ss_pred CcccccccccHHHHHHHHhCCCCceEEecccccccCCHHHHHHHhC-CCCCCcccccccC-c---cccccccccCCCCcE
Confidence 357778888999999999874 89999999 899999999987653 3322111 0000 0 0111 1125799999
Q ss_pred ecCCC----CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCC-ccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHHcC
Q 018104 131 DWRKK----GSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNK-LVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKG 205 (360)
Q Consensus 131 Dwr~~----g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~-~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 205 (360)
|||++ |.||||||||.||||||||++++||++++++++. .++||+|+|+||+...+.||+||++..|++|++++
T Consensus 77 DwR~~w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~~~~GC~GG~~~~A~~yi~~~- 155 (325)
T 3hhi_A 77 DSAEAWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSST- 155 (325)
T ss_dssp EHHHHSTTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGGGBCTTBCBCHHHHHHHHHHT-
T ss_pred ehhHhcCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccCCCCCCCCCCHHHHHHHHHHh-
Confidence 99998 8999999999999999999999999999999997 89999999999987546899999999999999998
Q ss_pred CCCCCCCCccc-CC----------CCCcCCC--------------C-CCCCcEEecceEEcCCChHHHHHHHH-HhCCeE
Q 018104 206 GVTTEAKYPYQ-AN----------DGTCDVS--------------K-ESSPAVSIDGHENVPANHEDALLKAV-AKQPVS 258 (360)
Q Consensus 206 Gi~~e~~yPY~-~~----------~~~c~~~--------------~-~~~~~~~i~~~~~v~~~~~~~i~~~l-~~gPV~ 258 (360)
|+++|++|||. +. .+.|... . .......+.+|. + .++++|+++| .+|||+
T Consensus 156 Gi~~e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v--~~~~~i~~~i~~~GPV~ 232 (325)
T 3hhi_A 156 GLVSDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L--QGEDDYMRELFFRGPFE 232 (325)
T ss_dssp CBCBTTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E--CSHHHHHHHHHHHCCEE
T ss_pred CCCcccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e--CCHHHHHHHHHHCCCEE
Confidence 99999999998 32 2556510 0 001223456665 5 6889999999 569999
Q ss_pred EEEecCCcccccccCceEeCCCCC-CCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCcccccc
Q 018104 259 VAIDAGSSDFQFYSEGVFTGECGT-ELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAME 337 (360)
Q Consensus 259 v~~~~~~~~f~~y~~Giy~~~~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~ 337 (360)
|+|+++ ++|++|++|||..+++. .++|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||+++
T Consensus 233 v~i~~~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~-~g~~YWivkNSWG~~WGe~GY~~i~rg~----n~CGI~~~ 306 (325)
T 3hhi_A 233 VAFDVY-EDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTS-NGVPYWKIANSWNTEWGMDGYFLIRRGS----SECGIEDG 306 (325)
T ss_dssp EEEEEE-HHHHTCCSSEECCCSCCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTSC
T ss_pred EEEEec-cccccccCceecCCCCCCCCCEEEEEEEEEec-CCceEEEEEeCCCCCcccCCEEEEEcCC----CeecCccc
Confidence 999997 78999999999887665 45999999999987 8999999999999999999999999984 56999999
Q ss_pred ceeeeecCCCCC
Q 018104 338 ASYPIKKSATNP 349 (360)
Q Consensus 338 ~~~~~~~~~~~~ 349 (360)
+++++...+.-+
T Consensus 307 ~~~g~p~~~~~~ 318 (325)
T 3hhi_A 307 GSAGIPLAPNTA 318 (325)
T ss_dssp EEEEEEC-----
T ss_pred eEEeecCCCCcc
Confidence 999887766543
No 12
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=2.5e-67 Score=481.32 Aligned_cols=236 Identities=64% Similarity=1.165 Sum_probs=203.4
Q ss_pred CCCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHH
Q 018104 124 TSIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKK 203 (360)
Q Consensus 124 ~~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~ 203 (360)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||....+.||+||++..|++|+++
T Consensus 2 ~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~~yi~~ 81 (262)
T 2fo5_A 2 SDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKN 81 (262)
T ss_dssp -CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCGGGCBCHHHHHHHHHH
T ss_pred CCCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCCCCCCCCCCCHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999998645789999999999999999
Q ss_pred cCCCCCCCCCcccCCCCCcCCCC--CCCC-cEEecceEEcCCChHHHHHHHHHhCCeEEEEecCCcccccccCceEeCCC
Q 018104 204 KGGVTTEAKYPYQANDGTCDVSK--ESSP-AVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGEC 280 (360)
Q Consensus 204 ~~Gi~~e~~yPY~~~~~~c~~~~--~~~~-~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~ 280 (360)
++|+++|++|||...++.|.... .... .+++++|..++..++++|+++|.+|||+++|+++.++|++|++|||+.+|
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~GPV~v~i~~~~~~f~~Y~sGVy~~~c 161 (262)
T 2fo5_A 82 NGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGEC 161 (262)
T ss_dssp TTCEEBTTTSCCCSSCCCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCC
T ss_pred cCCcCchhcCCCcCccCccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHhCCEEEEEecChHHHhccCCceECCCC
Confidence 77999999999999989998542 1234 67899999998778999999998899999999975689999999999888
Q ss_pred CCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeeecCCCC-CCCCCCCCCCC
Q 018104 281 GTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKKSATN-PTGPSDYPKDE 359 (360)
Q Consensus 281 ~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~~~~~~-~~~~~p~p~~~ 359 (360)
+..++|||+|||||++.+|++|||||||||++||++|||||+|+.++..|+|||++.++||++..+.+ +.+..+.|.++
T Consensus 162 ~~~~~HaV~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~~~~~~~~~~~~~~~~~~ 241 (262)
T 2fo5_A 162 GTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKTYSKPKPTPRRALGARE 241 (262)
T ss_dssp CCCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEECCC---------------
T ss_pred CCcCCEEEEEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEecCCCCCcccccCCcccc
Confidence 88889999999999975689999999999999999999999999876568899999999999988777 44444555554
No 13
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=9.3e-66 Score=461.51 Aligned_cols=218 Identities=56% Similarity=1.094 Sum_probs=200.4
Q ss_pred CCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHHc
Q 018104 125 SIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKK 204 (360)
Q Consensus 125 ~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~ 204 (360)
+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||... +.||+||++..|++|++++
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~y~~~~ 80 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA-NHGCRGGWMNPAFQFIVNN 80 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHH
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCC-CCCCCCCCHHHHHHHHHHh
Confidence 589999999999999999999999999999999999999999999999999999999875 7899999999999999987
Q ss_pred CCCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHhCCeEEEEecCCcccccccCceEeCCCCCCC
Q 018104 205 GGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTEL 284 (360)
Q Consensus 205 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 284 (360)
+|+++|++|||.+.++.|..... ...+++++|..++..++++|+++|.+|||+|+|++...+|++|++|||+.+|+..+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~ 159 (221)
T 1cqd_A 81 GGINSEETYPYRGQDGICNSTVN-APVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISA 159 (221)
T ss_dssp TSBCBTTTSCCCSSCCCCCSSSC-CCSBCCSEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCCC
T ss_pred CCccccccCCccCCCCCcCCCCC-CceEEeccEEEeCCchHHHHHHHHHhCCEEEEEeccCcccccccCccccCCCCCcC
Confidence 79999999999999999986543 45678999999988789999999988999999999766899999999998888889
Q ss_pred CeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeeecC
Q 018104 285 NHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKKS 345 (360)
Q Consensus 285 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~~~ 345 (360)
+|||+|||||++ +|++|||||||||++||++|||||+|+.++..|.|||+++++||++..
T Consensus 160 ~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~~ 219 (221)
T 1cqd_A 160 NHALTVVGYGTE-NDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVKKG 219 (221)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECC-
T ss_pred CeEEEEEEEccc-CCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEecC
Confidence 999999999998 889999999999999999999999998754457899999999999754
No 14
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=7.3e-66 Score=464.44 Aligned_cols=224 Identities=85% Similarity=1.414 Sum_probs=202.9
Q ss_pred CCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHHc
Q 018104 125 SIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKK 204 (360)
Q Consensus 125 ~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~ 204 (360)
+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||....+.||+||++..|++|+.++
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~ 80 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQR 80 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCTTBCBCHHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCCCCCCCCCCCHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999986447899999999999999987
Q ss_pred CCCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHhCCeEEEEecCCcccccccCceEeCCCCCCC
Q 018104 205 GGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTEL 284 (360)
Q Consensus 205 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 284 (360)
+|+++|++|||....+.|.........+++.+|..++..+++.|+++|.+|||+++|++..++|++|++|||+.+|+..+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~c~~~~ 160 (229)
T 1s4v_A 81 GGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTEL 160 (229)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCC
T ss_pred CCccccccCCccCCCCCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhcCCEEEEEEeCcHHHhhCCCcEECCCCCCCC
Confidence 79999999999998889975422234678899999987789999999988999999999557899999999988888888
Q ss_pred CeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeeecCCCC
Q 018104 285 NHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKKSATN 348 (360)
Q Consensus 285 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~~~~~~ 348 (360)
+|||+|||||++.+|++|||||||||++||++|||||+|+.++..|.|||+++++||++..+.+
T Consensus 161 ~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~~~~~ 224 (229)
T 1s4v_A 161 DHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIKKSSNN 224 (229)
T ss_dssp CEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECCSSCC
T ss_pred CeEEEEEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEecCCCC
Confidence 9999999999984489999999999999999999999999754457899999999999876654
No 15
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=1.1e-65 Score=459.60 Aligned_cols=216 Identities=51% Similarity=1.019 Sum_probs=198.7
Q ss_pred CCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHHcC
Q 018104 126 IPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKG 205 (360)
Q Consensus 126 lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 205 (360)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||.. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~yi~~~- 78 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHGCKGGYPPYALEYVAKN- 78 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS-SSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccC-CCCCCCCCCHHHHHHHHHHh-
Confidence 6999999999999999999999999999999999999999999999999999999986 37899999999999999998
Q ss_pred CCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHhCCeEEEEecCCcccccccCceEeCCCCCCCC
Q 018104 206 GVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELN 285 (360)
Q Consensus 206 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 285 (360)
|+++|++|||...++.|.........+++++|..++..++++|+++|.+|||+++|++..++|++|++|||+.+|+..++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~~ 158 (216)
T 1ppo_A 79 GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVD 158 (216)
T ss_dssp CBCBTTTSCCCSSCCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHHCCSSEECCSCCSCCC
T ss_pred CcCccccCCccCCCCCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHhCCEEEEEecCChhhhhcCCceECCCCCCCCC
Confidence 89999999999988899865333456789999999877899999999889999999997578999999999888888889
Q ss_pred eEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeeec
Q 018104 286 HGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKK 344 (360)
Q Consensus 286 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~~ 344 (360)
|||+|||||++ +|++|||||||||++||++|||||+|+.++..|+|||+++++||++.
T Consensus 159 HaV~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~~ 216 (216)
T 1ppo_A 159 HAVTAVGYGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTKN 216 (216)
T ss_dssp EEEEEEEEEEE-TTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEECC
T ss_pred EEEEEEEeecc-CCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEeeC
Confidence 99999999998 78999999999999999999999999975445789999999999863
No 16
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=1.6e-65 Score=459.13 Aligned_cols=217 Identities=53% Similarity=1.031 Sum_probs=199.2
Q ss_pred CCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHHcC
Q 018104 126 IPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKG 205 (360)
Q Consensus 126 lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 205 (360)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||.. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~- 78 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK-HSYGCKGGYQTTSLQYVANN- 78 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHc-
Confidence 6999999999999999999999999999999999999999999999999999999984 47899999999999999998
Q ss_pred CCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHhCCeEEEEecCCcccccccCceEeCCCCCCCC
Q 018104 206 GVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELN 285 (360)
Q Consensus 206 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 285 (360)
|+++|++|||...++.|.........+++++|..++..++++|+++|.+|||+++|++..++|++|++|||+.+|+..++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~ 158 (218)
T 1yal_A 79 GVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTKLD 158 (218)
T ss_dssp CBCBTTTSCCCSSCCCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCCC
T ss_pred CCCccccccccCCCCCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHhCCEEEEEeccchhccccCCceECCCCCCCCC
Confidence 89999999999988899865333456789999999887899999999889999999997578999999999888888889
Q ss_pred eEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeeecC
Q 018104 286 HGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKKS 345 (360)
Q Consensus 286 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~~~ 345 (360)
|||+|||||++ +|++|||||||||++||++|||||+|+.++..|.|||+++++||++..
T Consensus 159 HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~~ 217 (218)
T 1yal_A 159 HAVTAVGYGTS-DGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFKGF 217 (218)
T ss_dssp EEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEECCC
T ss_pred EEEEEEEeecc-CCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEEec
Confidence 99999999998 789999999999999999999999999754457899999999999754
No 17
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=1.2e-65 Score=460.80 Aligned_cols=217 Identities=59% Similarity=1.066 Sum_probs=199.3
Q ss_pred CCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCC-CCCCCCCcchhhHHHHHHHc
Q 018104 126 IPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGCNGGLMELAFEFIKKK 204 (360)
Q Consensus 126 lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~gc~GG~~~~a~~~~~~~ 204 (360)
||++||||++|+||||||||.||||||||++++||+++++++++.++||+|+|+||... ++.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999875 37899999999999999988
Q ss_pred CCCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHhCCeEEEEecCCcccccccCceEeCCCCCCC
Q 018104 205 GGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTEL 284 (360)
Q Consensus 205 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 284 (360)
+|+++|++|||...++.|..........++.+|..++..++++|+++|.+|||++++++..++|+.|++|||+.+|+..+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~ 160 (220)
T 3p5u_A 81 GGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGTAV 160 (220)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCSC
T ss_pred CCcCcccccccccCCCCcCcCCCCCceEEEccEEEeCCCcHHHHHHHHhcCCEEEEEecCchhhccccCceECCCCCCcc
Confidence 89999999999999989975432234578899999988889999999988999999999767899999999998888889
Q ss_pred CeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeeec
Q 018104 285 NHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKK 344 (360)
Q Consensus 285 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~~ 344 (360)
+|||+|||||++ ++++|||||||||++||++|||||+|+.++ .|+|||++.++||++.
T Consensus 161 ~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~-~~~Cgi~~~~~~p~~~ 218 (220)
T 3p5u_A 161 DHAVTIVGYGTE-GGIDYWIVKNSWGTTWGEEGYMRIQRNVGG-VGQCGIAKKASYPVKY 218 (220)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCCCT-TCGGGTTSSCEEEECS
T ss_pred ceEEEEEEEecC-CCceEEEEECCCCCCcccCCEEEEECCCCC-CCccCcccccceEEEe
Confidence 999999999987 889999999999999999999999999753 4689999999999875
No 18
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=2.6e-65 Score=456.54 Aligned_cols=214 Identities=57% Similarity=1.073 Sum_probs=198.0
Q ss_pred CCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHHcC
Q 018104 126 IPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKG 205 (360)
Q Consensus 126 lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 205 (360)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||... +.||+||++..|++|+++++
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~~~~~~~ 79 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTA-SHGCNGGWMNNAFQYIITNG 79 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcCC-CCCCCCCCHHHHHHHHHHhC
Confidence 79999999999999999999999999999999999999999999999999999999865 78999999999999999877
Q ss_pred CCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHhCCeEEEEecCCcccccccCceEeCCCCCCCC
Q 018104 206 GVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELN 285 (360)
Q Consensus 206 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 285 (360)
|+++|++|||...++.|.... ....++++|..++..++++|+++|.+|||+++|++...+|+.|++|||+.+|+..++
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~--~~~~~i~~~~~v~~~~~~~ik~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~ 157 (215)
T 1iwd_A 80 GIDTQQNYPYSAVQGSCKPYR--LRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQN 157 (215)
T ss_dssp CBCBTTTSCCCSSCCCCCTTC--CCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCCC
T ss_pred CcccccccCccCCCCCCCCCC--CceEEeCcEEEeCCCcHHHHHHHHHhCCEEEEEecCCcchhhcCCceECCCCCCcCC
Confidence 999999999999999998654 356788999999877899999999889999999998547999999999988888889
Q ss_pred eEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeee
Q 018104 286 HGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIK 343 (360)
Q Consensus 286 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~ 343 (360)
|||+|||||++ +|++|||||||||++||++|||||+|+.++..|.|||+++++||++
T Consensus 158 HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 214 (215)
T 1iwd_A 158 HGVVIVGYGTQ-SGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTK 214 (215)
T ss_dssp EEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred EEEEEEEEecc-CCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeee
Confidence 99999999998 8899999999999999999999999996544478999999999986
No 19
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=3.7e-65 Score=479.83 Aligned_cols=263 Identities=29% Similarity=0.582 Sum_probs=210.2
Q ss_pred HHHHHHhhCCCCCCeEEecccCCCCChhhhhhccccccccccccccccCCCcccccCCCCCCCCceecCCC----CCCCC
Q 018104 65 NVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPPSVDWRKK----GSVTA 140 (360)
Q Consensus 65 n~~~I~~~N~~~~s~~~g~N~fsD~t~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~----g~vtp 140 (360)
+.++|++||+.+.+|++|+| |+|+|.||++.+ ++.++..... . ..+......+||++||||++ +.|+|
T Consensus 11 ~~~~i~~~N~~~~~~~~~~n-f~~~~~e~~~~~-lg~~~~~~~~-~-----~~~~~~~~~~lP~s~DwR~~~~~c~~vtp 82 (317)
T 3pbh_A 11 SDELVNYVNKRNTTWQAGHN-FYNVDMSYLKRL-CGTFLGGPKP-P-----QRVMFTEDLKLPASFDAREQWPQCPTIKE 82 (317)
T ss_dssp CHHHHHHHHHHTCSEEECCC-CSSCCHHHHHHT-CCBCTTCCCC-S-----EEECCCSCCCCCSSEEHHHHCTTCGGGTC
T ss_pred cHHHHHHHHCCCCCeEEeec-cccCCHHHHHHH-cCCCCCcccc-C-----cccccccccCCCCCEechhccCCCCCcCC
Confidence 45789999987899999999 999888777554 4544332210 0 01122223579999999987 68999
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhcCC--ccccCHHHHHhhcC-CCCCCCCCcchhhHHHHHHHcCCCCCCCCC----
Q 018104 141 VKDQGQCGSCWAFSTIAAVEGINHIMTNK--LVSLSEQELVDCDT-DQNQGCNGGLMELAFEFIKKKGGVTTEAKY---- 213 (360)
Q Consensus 141 V~dQg~cGsCwAfA~~~~le~~~~~~~~~--~~~lS~q~l~dc~~-~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~y---- 213 (360)
|||||.||||||||++++||++++++++. .++||+|+|+||+. ..+.||+||++..|++|++++ |+++|.+|
T Consensus 83 VkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~-Gi~te~~Y~~~~ 161 (317)
T 3pbh_A 83 IRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK-GLVSGGLYESHV 161 (317)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHT-CEEBBCSTTCCC
T ss_pred ccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHh-CCCcchhccCCC
Confidence 99999999999999999999999999874 89999999999987 457899999999999999998 99999888
Q ss_pred ---cccC---------CCCCcCCCCCC-------CCc---------EEecceEEcCCChHHHHHHHH-HhCCeEEEEecC
Q 018104 214 ---PYQA---------NDGTCDVSKES-------SPA---------VSIDGHENVPANHEDALLKAV-AKQPVSVAIDAG 264 (360)
Q Consensus 214 ---PY~~---------~~~~c~~~~~~-------~~~---------~~i~~~~~v~~~~~~~i~~~l-~~gPV~v~~~~~ 264 (360)
||.. ..+.|...... ... ........++ .++++|+++| .+|||+|+|+++
T Consensus 162 ~c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~e~~i~~~i~~~GPV~v~i~~~ 240 (317)
T 3pbh_A 162 GCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NSEKDIMAEIYKNGPVEGAFSVY 240 (317)
T ss_dssp BSSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEEC-SCHHHHHHHHHHHCCEEEEEEEE
T ss_pred CCcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCC-cHHHHHHHHHHHCCCEEEEEEec
Confidence 9984 34456421000 000 1111223454 4788999998 569999999997
Q ss_pred CcccccccCceEeCCCCCC-CCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeee
Q 018104 265 SSDFQFYSEGVFTGECGTE-LNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIK 343 (360)
Q Consensus 265 ~~~f~~y~~Giy~~~~~~~-~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~ 343 (360)
++|++|++|||...|+.. ++|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||+++++..+.
T Consensus 241 -~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~-~g~~YWivkNSWG~~WGe~GY~ri~rg~----n~CgI~~~~~a~~p 314 (317)
T 3pbh_A 241 -SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVE-NGTPYWLVANSWNTDWGDNGFFKILRGQ----DHCGIESEVVAGIP 314 (317)
T ss_dssp -GGGGGEEEEEECCCSCCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEECCB
T ss_pred -ccccCCCCcEEccCCCCCCCCEEEEEEEEEEe-CCeeEEEEEcCCCCCcCCCcEEEEEcCC----CcccCCCceEeeec
Confidence 799999999999877665 4999999999997 8999999999999999999999999995 56999999887654
No 20
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=1.8e-64 Score=450.41 Aligned_cols=211 Identities=47% Similarity=0.943 Sum_probs=194.2
Q ss_pred CCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHHcC
Q 018104 126 IPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKG 205 (360)
Q Consensus 126 lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 205 (360)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||.. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~yi~~~- 78 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDR-RSYGCNGGYPWSALQLVAQY- 78 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHT-
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCC-CCCCCCCCCHHHHHHHHHHh-
Confidence 6999999999999999999999999999999999999999999999999999999986 37899999999999999998
Q ss_pred CCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHhCCeEEEEecCCcccccccCceEeCCCCCCCC
Q 018104 206 GVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELN 285 (360)
Q Consensus 206 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 285 (360)
|+++|++|||...++.|.........+++++|..++..++++|+++|.+|||+++|++...+|++|++|||+.+|+..++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~~~~~~ 158 (212)
T 2cio_A 79 GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVD 158 (212)
T ss_dssp CBCBTTTSCCCSSCCCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCCC
T ss_pred CcCcccccCCcCCCCCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHhCCEEEEEeccCcchhhcCCceecCCCCCCCC
Confidence 89999999999988999865433456789999999877899999999889999999997558999999999888888889
Q ss_pred eEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeee
Q 018104 286 HGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIK 343 (360)
Q Consensus 286 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~ 343 (360)
|||+|||||+ +|||||||||++||++|||||+|+.++..|+|||+++++||++
T Consensus 159 HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (212)
T 2cio_A 159 HAVAAVGYGP-----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 211 (212)
T ss_dssp EEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEEC
T ss_pred EEEEEEEecC-----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEe
Confidence 9999999997 6999999999999999999999997544578999999999986
No 21
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=5.6e-65 Score=456.89 Aligned_cols=216 Identities=51% Similarity=0.973 Sum_probs=193.6
Q ss_pred CCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHHcC
Q 018104 126 IPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKG 205 (360)
Q Consensus 126 lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 205 (360)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||... +.||+||++..|++|+++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~~~~~~~ 79 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTX-XXXXXGGDADDAFRWVITNG 79 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC-------CCCHHHHHHHHHHHT
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCc-ccccCCCCHHHHHHHHHHcC
Confidence 79999999999999999999999999999999999999999999999999999999976 89999999999999999988
Q ss_pred CCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHhCCeEEEEecCCcccccccC-ceEeC-CCCC-
Q 018104 206 GVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSE-GVFTG-ECGT- 282 (360)
Q Consensus 206 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~-Giy~~-~~~~- 282 (360)
|+++|++|||.+.++.|..... ...++.+|..++ .++++|+++|.+|||+++|++...+|+.|++ |||+. .|+.
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~--~~~~i~~~~~v~-~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~~~ 156 (222)
T 3u8e_A 80 GIASDANYPYTGVDGTCDLNKP--IAARIDGYTNVP-NSSSALLDAVAKQPVSVNIYTSSTSFQLYTGPGIFAGSSCSDD 156 (222)
T ss_dssp CBCBTTTSCCCSSCCCCCCCSC--CCBCCCEEEECC-SCHHHHHHHHHHSCEEEEECCCSHHHHTCCCSSCBCCTTCCCC
T ss_pred CccchhcCCCcccCCccccCCC--CeEEEccEEEeC-CcHHHHHHHHhCCCEEEEEEecChhhhcEeCCceECCCcccCC
Confidence 9999999999999999987653 267899999998 6899999999889999999997558999999 99987 6766
Q ss_pred --CCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeeecC
Q 018104 283 --ELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKKS 345 (360)
Q Consensus 283 --~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~~~ 345 (360)
.++|||+|||||++.++++|||||||||++||++|||||+|+.++..|+|||+++++||++.+
T Consensus 157 ~~~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~~~ 221 (222)
T 3u8e_A 157 PATVDHTVLIVGYGSNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTKST 221 (222)
T ss_dssp GGGCCEEEEEEEEEESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEECCC
T ss_pred CCcCCEEEEEEEEeecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEEeC
Confidence 679999999999983389999999999999999999999999875567899999999998653
No 22
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=2.8e-64 Score=449.59 Aligned_cols=213 Identities=50% Similarity=1.021 Sum_probs=195.9
Q ss_pred CCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHHcC
Q 018104 126 IPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKG 205 (360)
Q Consensus 126 lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 205 (360)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||... +.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~y~~~~- 78 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCERR-SHGCDGGYQTTSLQYVVDN- 78 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcCC-CCCCCCCCHHHHHHHHHHh-
Confidence 69999999999999999999999999999999999999999999999999999999863 7899999999999999999
Q ss_pred CCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHhCCeEEEEecCCcccccccCceEeCCCCCCCC
Q 018104 206 GVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELN 285 (360)
Q Consensus 206 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 285 (360)
|+++|++|||....+.|..........++++|..++..++++|+++|.+|||+++|++..++|++|++|||+.+|+..++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~ 158 (214)
T 2bdz_A 79 GVHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTD 158 (214)
T ss_dssp CEEBTTTSCCCSSCCCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCSCCSCCC
T ss_pred CCCccccCCCCCCCCCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHhCCEEEEEeeChhHhhcccCceecCCCCCCCC
Confidence 99999999999988999876543457889999999888899999999889999999997568999999999988888899
Q ss_pred eEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeeecC
Q 018104 286 HGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKKS 345 (360)
Q Consensus 286 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~~~ 345 (360)
|||+|||||+ +|||||||||++||++|||||+|+.++..|+|||+++++||++..
T Consensus 159 HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~~ 213 (214)
T 2bdz_A 159 HAVTAVGYGK-----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIKGY 213 (214)
T ss_dssp EEEEEEEECS-----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEECC-
T ss_pred eEEEEEEcCC-----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEecC
Confidence 9999999997 699999999999999999999999754457899999999998753
No 23
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=4.4e-64 Score=457.13 Aligned_cols=219 Identities=47% Similarity=0.892 Sum_probs=196.8
Q ss_pred CCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHHc
Q 018104 125 SIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKK 204 (360)
Q Consensus 125 ~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~ 204 (360)
+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||.. .+.||+||++..|++|++++
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~-~~~gC~GG~~~~a~~y~~~~ 79 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVD-ESEGCYNGWHYQSFEWVVKH 79 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSBTTTBCCHHHHHHHHHHT
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcC-CCCCCCCCCHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999986 47899999999999999987
Q ss_pred CCCCCCCCCcccCCCCCcCCCCCCCCcEEecce---EEcCCChHHHHHHHHHh----CCeEEEEecCCcccccccCceEe
Q 018104 205 GGVTTEAKYPYQANDGTCDVSKESSPAVSIDGH---ENVPANHEDALLKAVAK----QPVSVAIDAGSSDFQFYSEGVFT 277 (360)
Q Consensus 205 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~---~~v~~~~~~~i~~~l~~----gPV~v~~~~~~~~f~~y~~Giy~ 277 (360)
+|+++|++|||...++.|..... ...+++++| ..++..++++|+++|.+ |||+++|++ ++|++|++|||+
T Consensus 80 ~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~--~~f~~Y~~Giy~ 156 (246)
T 2b1m_A 80 GGIASEADYPYKARDGKCKANEI-QDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA--KDFHFYSGGIYD 156 (246)
T ss_dssp TCBCBTTTSCCCSSCCCCCGGGC-CCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECC--TTGGGCCSSEEC
T ss_pred CCcCccccccccCCCCcCcCCCC-CCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEc--chhhcccceeec
Confidence 79999999999999999986532 446788898 88887789999999976 999999999 589999999998
Q ss_pred C-CCCCC--CCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeeecCCCC
Q 018104 278 G-ECGTE--LNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKKSATN 348 (360)
Q Consensus 278 ~-~~~~~--~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~~~~~~ 348 (360)
. .|+.. ++|||+|||||++ +|++|||||||||++||++|||||+|+.++..|.|||++.++||++..+.|
T Consensus 157 ~~~c~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~~~~~~ 229 (246)
T 2b1m_A 157 GGNCSSPYGINHFVLIVGYGSE-DGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPIIEKSET 229 (246)
T ss_dssp CTTCCSSCCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEECCC---
T ss_pred CCCCCCCCcCceEEEEEEEecc-CCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEecCCCC
Confidence 7 67765 8999999999998 889999999999999999999999999744457899999999999876543
No 24
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=2.4e-64 Score=450.00 Aligned_cols=212 Identities=48% Similarity=1.000 Sum_probs=195.6
Q ss_pred CCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHHcC
Q 018104 126 IPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKG 205 (360)
Q Consensus 126 lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 205 (360)
||++||||++|+||||||||.||||||||+++++|+++++++++.++||+|+|+||... +.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~~~~~~- 78 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCERR-SYGCRGGFPLYALQYVANS- 78 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHH-
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcCC-CCCCCCCCHHHHHHHHHHc-
Confidence 79999999999999999999999999999999999999999999999999999999974 8899999999999999999
Q ss_pred CCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHhCCeEEEEecCCcccccccCceEeCCCCCCCC
Q 018104 206 GVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELN 285 (360)
Q Consensus 206 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 285 (360)
|+++|++|||.+..+.|..........++.+|..++..+++.+++++.+|||++++++..++|+.|++|||+..|+..++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~ 158 (213)
T 3ioq_A 79 GIHLRQYYPYEGVQRQCRASQAKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIFAGPCGTSID 158 (213)
T ss_dssp CEEBGGGSCCCSSCCCCCGGGCCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCCC
T ss_pred CCCchhccCcCCCCCCCCCCccCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeEcCCCCCccC
Confidence 99999999999999999864433567889999999887888888888889999999997678999999999988888899
Q ss_pred eEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeeec
Q 018104 286 HGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKK 344 (360)
Q Consensus 286 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~~ 344 (360)
|||+|||||+ +|||||||||++||++|||||+|+.+...|+|||+++++||++.
T Consensus 159 HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~ 212 (213)
T 3ioq_A 159 HAVAAVGYGN-----DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTKN 212 (213)
T ss_dssp EEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEECC
T ss_pred ceEEEEecCC-----CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEec
Confidence 9999999996 59999999999999999999999975445789999999999863
No 25
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=8.1e-64 Score=444.67 Aligned_cols=207 Identities=60% Similarity=1.085 Sum_probs=191.4
Q ss_pred CCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHHcC
Q 018104 126 IPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKG 205 (360)
Q Consensus 126 lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 205 (360)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||... +.||+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~y~~~~~ 79 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKK-NHGCLGGAFVFAYQYIINNG 79 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcCC-CCCCCCCCHHHHHHHHHHhC
Confidence 69999999999999999999999999999999999999999999999999999999863 78999999999999999877
Q ss_pred CCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHhCCeEEEEecCCcccccccCceEeCCCCCCCC
Q 018104 206 GVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELN 285 (360)
Q Consensus 206 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 285 (360)
|+++|++|||...++.|.. ....+++++|..++..++++|+++|.+|||+++|++...+|++|++|||+.+|+..++
T Consensus 80 Gi~~e~~yPY~~~~~~C~~---~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~ 156 (208)
T 1o0e_A 80 GIDTQANYPYKAVQGPCQA---ASKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKLN 156 (208)
T ss_dssp CBCBTTTSCCCSSCCCCCC---CCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCCC
T ss_pred CcCcccccCccCCCCcCCC---CCceEEeCeEEEeCCCCHHHHHHHHHhCCEEEEEEccCcccccccCceECCCCCCcCC
Confidence 9999999999999999986 2456788999999877899999999889999999997558999999999988888889
Q ss_pred eEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeee
Q 018104 286 HGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIK 343 (360)
Q Consensus 286 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~ 343 (360)
|||+|||||+ +|||||||||++||++|||||+|+.+ .|.|||+++++||++
T Consensus 157 HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~--~~~Cgi~~~~~~p~~ 207 (208)
T 1o0e_A 157 HGVTIVGYQA-----NYWIVRNSWGRYWGEKGYIRMLRVGG--CGLCGIARLPYYPTK 207 (208)
T ss_dssp EEEEEEEECS-----SEEEEECSBCTTSTBTTEEEEECCST--TCGGGTTSSCEEEEC
T ss_pred EEEEEEEeCC-----CeEEEEcCCCCcccCCcEEEEEcCCC--CCcCCCcccceeeec
Confidence 9999999997 69999999999999999999999853 267999999999985
No 26
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=6.9e-64 Score=448.02 Aligned_cols=212 Identities=51% Similarity=0.938 Sum_probs=194.1
Q ss_pred CCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHHcC
Q 018104 126 IPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKG 205 (360)
Q Consensus 126 lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 205 (360)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|+||.. .+.||+||++..|++|+++++
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~-~~~gC~GG~~~~a~~~~~~~~ 79 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGCGGGYMTNAFQYVQKNR 79 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHhC
Confidence 7999999999999999999999999999999999999999999999999999999997 489999999999999998888
Q ss_pred CCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHh-CCeEEEEecCCcccccccCceEeC-CCC-C
Q 018104 206 GVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAK-QPVSVAIDAGSSDFQFYSEGVFTG-ECG-T 282 (360)
Q Consensus 206 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~~~~~~~f~~y~~Giy~~-~~~-~ 282 (360)
|+++|++|||...++.|..... ....++.+|..++..++++|+++|.+ |||+++|++..++|+.|++|||.. .|. .
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 158 (215)
T 3kwz_A 80 GIDSEDAYPYVGQEESCMYNPT-GKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD 158 (215)
T ss_dssp CEEBTTTSCCCSSCCCCCCCGG-GEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCTT
T ss_pred CccccccCCCccCCCccccCCC-CceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCCCC
Confidence 9999999999999999986543 44678899999987789999999965 899999999767899999999976 464 4
Q ss_pred CCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeee
Q 018104 283 ELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIK 343 (360)
Q Consensus 283 ~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~ 343 (360)
.++|||+|||||++ ++++|||||||||++||++|||||+|+.+ |+|||++.++||++
T Consensus 159 ~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WG~~Gy~~i~r~~~---n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 159 NLNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIANLASFPKM 215 (215)
T ss_dssp CCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTSSCEEECC
T ss_pred hhhCEEEEEEEecc-CCceEEEEECCcCcccccCCEEEEecCCC---CccCcCCceeeeeC
Confidence 78999999999998 88999999999999999999999999853 56999999999974
No 27
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=9.4e-64 Score=454.04 Aligned_cols=216 Identities=42% Similarity=0.829 Sum_probs=197.1
Q ss_pred CCCCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHH
Q 018104 123 VTSIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIK 202 (360)
Q Consensus 123 ~~~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~ 202 (360)
..+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||... +.||+||++..|++|+.
T Consensus 15 ~~~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~~-~~gC~GG~~~~a~~yi~ 93 (241)
T 2oul_A 15 ENFDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFK-NYGCNGGLINNAFEDMI 93 (241)
T ss_dssp CCCCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCTT-SCTTBCBCHHHHHHHHH
T ss_pred cccCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcCC-CCCCCCCCHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999875 78999999999999999
Q ss_pred HcCCCCCCCCCcccCCCCC-cCCCCCCCCcEEecceEEcCCChHHHHHHHHHhCCeEEEEecCCcccccccCceEeCCCC
Q 018104 203 KKGGVTTEAKYPYQANDGT-CDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECG 281 (360)
Q Consensus 203 ~~~Gi~~e~~yPY~~~~~~-c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~ 281 (360)
++.|+++|++|||....+. |..... ...+++++|..++..++++|+++| |||+++|++. ++|+.|++|||+..|+
T Consensus 94 ~~~Gi~~e~~yPY~~~~~~~C~~~~~-~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~ 169 (241)
T 2oul_A 94 ELGGICPDGDYPYVSDAPNLCNIDRC-TEKYGIKNYLSVPDNKLKEALRFL--GPISISVAVS-DDFAFYKEGIFDGECG 169 (241)
T ss_dssp HTTSBCBTTSSCCCTTSCCCCCTTSS-SCCBCCSEEEECCTTCHHHHHHHT--CCEEEEECBC-HHHHTCCSSBCCSCBC
T ss_pred HhCCcCccccCCCcCCCCCcCCCCCC-ccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-cchhhcCCcEEcCcCC
Confidence 8569999999999998888 986543 456789999999877899999999 9999999996 7899999999988777
Q ss_pred CCCCeEEEEEEeeecC---------CCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeee
Q 018104 282 TELNHGVAAVGYGTTL---------DGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIK 343 (360)
Q Consensus 282 ~~~~Hav~iVGyg~~~---------~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~ 343 (360)
..++|||+|||||++. .+++|||||||||++||++|||||+|+.++..++|||+++++||++
T Consensus 170 ~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 240 (241)
T 2oul_A 170 DQLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLI 240 (241)
T ss_dssp SSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEEC
T ss_pred CCCCEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEee
Confidence 6699999999999873 2789999999999999999999999997665567999999999985
No 28
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=5.4e-64 Score=449.66 Aligned_cols=213 Identities=48% Similarity=0.914 Sum_probs=194.3
Q ss_pred CCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhc-CC-CCCCCCCcchhhHHHHHHH
Q 018104 126 IPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCD-TD-QNQGCNGGLMELAFEFIKK 203 (360)
Q Consensus 126 lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~-~~-~~~gc~GG~~~~a~~~~~~ 203 (360)
||++||||++|+||||||||.||||||||++++||+++++++++.++||+|+|+||. .. ++.||+||++..|++|+.+
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999998 32 4789999999999999987
Q ss_pred cCCCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHh-CCeEEEEecCCcccccccCceEeC-CCC
Q 018104 204 KGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAK-QPVSVAIDAGSSDFQFYSEGVFTG-ECG 281 (360)
Q Consensus 204 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~~~~~~~f~~y~~Giy~~-~~~ 281 (360)
++|+++|++|||...++.|..... ....++.+|..++..++++|+++|.+ |||++++++..++|++|++|||.. .|.
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~ 160 (218)
T 3ovx_A 82 NKGIDSDASYPYKAMDQKCQYDSK-YRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT 160 (218)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCGG-GEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTCC
T ss_pred hCCcCcccccCccCCCCcccCCCc-cceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCCC
Confidence 669999999999999999986543 45577889999987789999999965 899999999866899999999976 577
Q ss_pred CCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeee
Q 018104 282 TELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIK 343 (360)
Q Consensus 282 ~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~ 343 (360)
..++|||+|||||++ +|++|||||||||++||++|||||+|+.. |.|||+++++||++
T Consensus 161 ~~~~HaV~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~---n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 161 QNVNHGVLVVGYGDL-NGKEYWLVKNSWGHNFGEEGYIRMARNKG---NHCGIASFPSYPEI 218 (218)
T ss_dssp SCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred cccCcEEEEEEEecc-CCceEEEEECCCCCccccCCEEEEecCCC---CcccccCceeeeeC
Confidence 788999999999998 78999999999999999999999999852 56999999999985
No 29
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=1.1e-63 Score=454.26 Aligned_cols=217 Identities=39% Similarity=0.766 Sum_probs=197.1
Q ss_pred CCCCCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHH
Q 018104 122 KVTSIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFI 201 (360)
Q Consensus 122 ~~~~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~ 201 (360)
...+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||... +.||+||++..|++|+
T Consensus 16 ~~~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~~-~~gC~GG~~~~a~~y~ 94 (243)
T 3bwk_A 16 DAKLDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSVK-NNGCYGGYITNAFDDM 94 (243)
T ss_dssp TCCCCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCTT-SCGGGCCCHHHHHHHH
T ss_pred ccccCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCC-CCCCCCCCHHHHHHHH
Confidence 345799999999999999999999999999999999999999999999999999999999875 7899999999999999
Q ss_pred HHcCCCCCCCCCcccCCCCC-cCCCCCCCCcEEecceEEcCCChHHHHHHHHHhCCeEEEEecCCcccccccCceEeCCC
Q 018104 202 KKKGGVTTEAKYPYQANDGT-CDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGEC 280 (360)
Q Consensus 202 ~~~~Gi~~e~~yPY~~~~~~-c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~ 280 (360)
.++.|+++|++|||....+. |..... ...+++++|..++..++++|+++| |||+++|++. ++|+.|++|||+..|
T Consensus 95 ~~~~Gi~~e~~yPY~~~~~~~C~~~~~-~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c 170 (243)
T 3bwk_A 95 IDLGGLCSQDDYPYVSNLPETCNLKRC-NERYTIKSYVSIPDDKFKEALRYL--GPISISIAAS-DDFAFYRGGFYDGEC 170 (243)
T ss_dssp HHTTSBCBTTTSCCCTTSCCCCCGGGC-SSCBCCCEEEECCTTCHHHHHHHT--CCEEEEECCC-HHHHTCCSSSCCCCC
T ss_pred HHhCCcccccccCCcCCCCCcCCCCCC-ccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-hhHHhcCCceecCCC
Confidence 98569999999999998888 986432 456789999999887899999999 9999999996 789999999998878
Q ss_pred CCCCCeEEEEEEeeecC---------CCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeee
Q 018104 281 GTELNHGVAAVGYGTTL---------DGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIK 343 (360)
Q Consensus 281 ~~~~~Hav~iVGyg~~~---------~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~ 343 (360)
+..++|||+|||||++. .+++|||||||||++||++|||||+|+.++..+.|||+++++||++
T Consensus 171 ~~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 242 (243)
T 3bwk_A 171 GAAPNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPLL 242 (243)
T ss_dssp CSSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEEC
T ss_pred CCcCCeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEec
Confidence 76699999999999873 2789999999999999999999999997665567999999999985
No 30
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=7.1e-64 Score=450.77 Aligned_cols=218 Identities=49% Similarity=0.949 Sum_probs=198.4
Q ss_pred CCCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCC-CCCCCCCcchhhHHHHHH
Q 018104 124 TSIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGCNGGLMELAFEFIK 202 (360)
Q Consensus 124 ~~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~gc~GG~~~~a~~~~~ 202 (360)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||... ++.||+||++..|++|+.
T Consensus 5 ~~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~ 84 (224)
T 3f75_A 5 SELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVL 84 (224)
T ss_dssp GGSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHH
T ss_pred cCCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHH
Confidence 3689999999999999999999999999999999999999999999999999999999864 478999999999999999
Q ss_pred HcCCCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHhCCeEEEEecCCcccccccCceEeCCCCC
Q 018104 203 KKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGT 282 (360)
Q Consensus 203 ~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~ 282 (360)
+++|+++|++|||...++.|..... ....++.+|..++..++++|+++|.+|||+++|++..++|++|++|||++.|+.
T Consensus 85 ~~~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~~~~~~~~~l~~~l~~gPV~v~i~~~~~~f~~y~~Giy~~~~~~ 163 (224)
T 3f75_A 85 DSGGICSEDAYPYLARDEECRAQSC-EKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGVFDASCGT 163 (224)
T ss_dssp HHTCBCBTTTSCCCSSCCCCCGGGS-CCCBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTEEEEEECCCCCC
T ss_pred HhCCccccccCCCcCCCCCCCcCCC-CceEEeccEEEeCCChHHHHHHHHcCCCEEEEEeccchhhhcCccceECCCCCC
Confidence 8559999999999999999986543 345678999999888899999999999999999998568999999999988888
Q ss_pred CCCeEEEEEEeeecC-CCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeee
Q 018104 283 ELNHGVAAVGYGTTL-DGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIK 343 (360)
Q Consensus 283 ~~~Hav~iVGyg~~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~ 343 (360)
.++|||+|||||++. ++++|||||||||++||++|||||+|+... .|.|||+++++||++
T Consensus 164 ~~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 164 DLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGE-EGQCGLLLDASFPVM 224 (224)
T ss_dssp CCCEEEEEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSCT-TCGGGTTSSCEEEEC
T ss_pred ccCeEEEEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCCC-CCcCcccCceeeeeC
Confidence 899999999999875 788999999999999999999999999631 367999999999974
No 31
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=3.4e-63 Score=444.86 Aligned_cols=213 Identities=51% Similarity=1.001 Sum_probs=191.4
Q ss_pred CCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCC-CCCCCCCcchhhHHHHHHHc
Q 018104 126 IPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGCNGGLMELAFEFIKKK 204 (360)
Q Consensus 126 lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~gc~GG~~~~a~~~~~~~ 204 (360)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||... ++.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999864 47899999999999999754
Q ss_pred CCCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHh-CCeEEEEecCCcccccccCceEeCC-CCC
Q 018104 205 GGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAK-QPVSVAIDAGSSDFQFYSEGVFTGE-CGT 282 (360)
Q Consensus 205 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~~~~~~~f~~y~~Giy~~~-~~~ 282 (360)
.|+++|++|||...++.|..... ....++++|..++. ++++|+++|.+ |||+++|++..++|++|++|||..+ |+.
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~~ 158 (220)
T 2xu3_A 81 GGLDSEESYPYEATEESCKYNPK-YSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSS 158 (220)
T ss_dssp TCEEBTTTSCCCSSCCCCCCCGG-GEEECCSEEEECCS-CHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCS
T ss_pred CCcccccccCCcccCcCccCCCC-CcceeeeeEEEeCC-CHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCCCC
Confidence 59999999999999899986542 34678899999977 88999999965 8999999997568999999999764 764
Q ss_pred -CCCeEEEEEEeee---cCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeee
Q 018104 283 -ELNHGVAAVGYGT---TLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIK 343 (360)
Q Consensus 283 -~~~Hav~iVGyg~---~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~ 343 (360)
.++|||+|||||+ ++++++|||||||||++||++|||||+|+.+ |+|||+++++||++
T Consensus 159 ~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~---n~Cgi~~~~~~p~~ 220 (220)
T 2xu3_A 159 EDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASYPTV 220 (220)
T ss_dssp SCCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred CCCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCC---CcCCccccceeeeC
Confidence 7899999999994 3378999999999999999999999999853 56999999999974
No 32
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=9.8e-63 Score=440.21 Aligned_cols=208 Identities=47% Similarity=0.886 Sum_probs=186.0
Q ss_pred CCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHHc-
Q 018104 126 IPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKK- 204 (360)
Q Consensus 126 lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~- 204 (360)
||++||||++|+||||||||.||||||||++++||++++++++..++||+|+|+||... +.||+||++..|++|++++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~y~~~~~ 79 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKT-DSGCSGGLMNNAFEWIVQEN 79 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCSS-SCGGGCCCHHHHHHHHHHHS
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCCC-CCCCCCCCHHHHHHHHHHhc
Confidence 69999999999999999999999999999999999999999999999999999999875 7899999999999999985
Q ss_pred -CCCCCCCCCcccCCCC---CcCCCCCCCCcEEecceEEcCCChHHHHHHHHH-hCCeEEEEecCCcccccccCceEeCC
Q 018104 205 -GGVTTEAKYPYQANDG---TCDVSKESSPAVSIDGHENVPANHEDALLKAVA-KQPVSVAIDAGSSDFQFYSEGVFTGE 279 (360)
Q Consensus 205 -~Gi~~e~~yPY~~~~~---~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Giy~~~ 279 (360)
+|+++|++|||....+ .|..... ....++.++..++. ++++|+++|. +|||++++++ ++|+.|++|||+..
T Consensus 80 ~gGi~~e~~yPY~~~~~~~~~C~~~~~-~~~~~i~~~~~v~~-~~~~ik~~l~~~gPV~v~~~~--~~f~~Y~~Giy~~~ 155 (215)
T 3i06_A 80 NGAVYTEDSYPYASGEGISPPCTTSGH-TVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA--SSWMTYTGGVMTSC 155 (215)
T ss_dssp TTEEEC-CCSCCCCTTSCCCCCCCSSC-CEEEEEEEEEECCS-CHHHHHHHHHHHCCEEEEECC--TTGGGCCSSEECSC
T ss_pred cccccccCccCCcCCCCCCCccccCCc-ccceEecceEEeCC-hHHHHHHHHHHCCCEEEEEEc--hHHhcCCCCcccCC
Confidence 5799999999997543 6875542 34578899999975 7899999995 6999999998 37999999999864
Q ss_pred CCCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeee
Q 018104 280 CGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIK 343 (360)
Q Consensus 280 ~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~ 343 (360)
....++|||+|||||++ ++++|||||||||++||++|||||+|+. |.|||++++.||++
T Consensus 156 ~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~rg~----n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 156 VSEQLDHGVLLVGYNDS-AAVPYWIIKNSWTTQWGEEGYIRIAKGS----NQCLVKEEASSAVV 214 (215)
T ss_dssp CCSCCCEEEEEEEEESS-SSSCEEEEECSBCTTSTBTTEEEEESSS----CGGGTTSSEEEEEE
T ss_pred CCCccCcEEEEEEEecc-CCcEEEEEECCCCCCcccCceEEEecCC----CeecCCCceeEEec
Confidence 45678999999999987 7899999999999999999999999984 56999999999986
No 33
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=8.2e-63 Score=440.42 Aligned_cols=208 Identities=45% Similarity=0.836 Sum_probs=188.3
Q ss_pred CCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHHcC
Q 018104 126 IPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKG 205 (360)
Q Consensus 126 lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 205 (360)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||... +.||+||++..|++|+++++
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~~i~~~~ 79 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKM-DKACMGGLPSNAYSAIKNLG 79 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSS-SCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCC-CCCCCCCCHHHHHHHHHHhc
Confidence 79999999999999999999999999999999999999999999999999999999864 78999999999999999877
Q ss_pred CCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHH-hCCeEEEEecCCcccccccCceEeC---CCC
Q 018104 206 GVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVA-KQPVSVAIDAGSSDFQFYSEGVFTG---ECG 281 (360)
Q Consensus 206 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Giy~~---~~~ 281 (360)
|+++|++|||.+....|..... ....++.++..++. ++++|+++|. +|||+++|++. .|++|++|||+. .|+
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~i~~-~~~~ik~~l~~~GPV~v~i~~~--~f~~Y~~Giy~~~~~~c~ 155 (214)
T 1m6d_A 80 GLETEDDYSYQGHMQSCQFSAE-KAKVYIQDSVELSQ-NEQKLAAWLAKRGPISVAINAF--GMQFYRHGISRPLRPLCS 155 (214)
T ss_dssp CBCBTTTSCCCSSCCCCCCCGG-GCCBCCSEEEECCS-CHHHHHHHHHHHCCEEEEECTH--HHHHCCSSEECCCGGGSC
T ss_pred CcccccCcCcCCCCCcCCCCcc-cceEEecCEEEeCh-HHHHHHHHHHhCCCEEEEEEec--hhhhcCCceecCCCCcCC
Confidence 9999999999998889986543 34567888888875 7889999995 69999999996 599999999975 355
Q ss_pred C-CCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeee
Q 018104 282 T-ELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIK 343 (360)
Q Consensus 282 ~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~ 343 (360)
. .++|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 156 ~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 156 PWLIDHAVLLVGYGQR-SDVPFWAIKNSWGTDWGEKGYYYLHRGS----GACGVNTMASSAVV 213 (214)
T ss_dssp TTCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSS----CGGGTTTTCEEEEC
T ss_pred CCcCCEEEEEEEEeec-CCcEEEEEEeCCCCCcccCcEEEEEcCC----CccccCceeEEEEe
Confidence 4 57999999999997 8899999999999999999999999984 56999999999986
No 34
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=4e-63 Score=444.62 Aligned_cols=212 Identities=47% Similarity=0.966 Sum_probs=193.1
Q ss_pred CCCceecCCCC-CCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCC-CCCCCCCcchhhHHHHHHH
Q 018104 126 IPPSVDWRKKG-SVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGCNGGLMELAFEFIKK 203 (360)
Q Consensus 126 lP~~~Dwr~~g-~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~gc~GG~~~~a~~~~~~ 203 (360)
||++||||++| +||||||||.||||||||++++||+++++++++.++||+|+|+||... .+.||+||++..|++|+++
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 79999999999 899999999999999999999999999999999999999999999864 4789999999999999998
Q ss_pred cCCCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHH-hCCeEEEEecCCcccccccCceEeC-CCC
Q 018104 204 KGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVA-KQPVSVAIDAGSSDFQFYSEGVFTG-ECG 281 (360)
Q Consensus 204 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Giy~~-~~~ 281 (360)
++|+++|++|||....+.|..... ....++.++..++..++++|+++|. .|||++++++. ++|+.|++|||.. .|.
T Consensus 81 ~~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~-~~f~~Y~~Giy~~~~~~ 158 (220)
T 8pch_A 81 NKGIMGEDTYPYKGQDDHCKFQPD-KAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVT-NDFLMYRKGIYSSTSCH 158 (220)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCGG-GEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCC-HHHHTCCSSEECCSSCC
T ss_pred cCCcCcccccCccCCCCCCCCCCC-cceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEec-cchhhcCCCcccCCcCC
Confidence 889999999999999999986543 4457788999998888999999995 58999999998 5899999999976 454
Q ss_pred C---CCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeeec
Q 018104 282 T---ELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKK 344 (360)
Q Consensus 282 ~---~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~~ 344 (360)
. .++|||+|||||++ ++++|||||||||++||++|||||+|+. |+|||++++.||+..
T Consensus 159 ~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~~~p~ 219 (220)
T 8pch_A 159 KTPDKVNHAVLAVGYGEE-NGIPYWIVKNSWGPQWGMNGYFLIERGK----NMCGLAACASYPIPL 219 (220)
T ss_dssp CSTTTCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEEEC
T ss_pred CCCCcCCcEEEEEEEEcc-CCeeEEEEECCCCcCcccCCEEEEEcCC----CccccCCCceeEeec
Confidence 3 57999999999987 7899999999999999999999999984 669999999999864
No 35
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=2.4e-62 Score=440.02 Aligned_cols=210 Identities=31% Similarity=0.586 Sum_probs=191.0
Q ss_pred CCCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHH
Q 018104 124 TSIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKK 203 (360)
Q Consensus 124 ~~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~ 203 (360)
.+||++||||++|+||||||||.||||||||++++||+++.+++++.++||+|+|+||.. +.||+||++..|++|+++
T Consensus 8 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~--~~gC~GG~~~~a~~~~~~ 85 (222)
T 3f5v_A 8 GNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS--QHGCHGDTIPRGIEYIQH 85 (222)
T ss_dssp CCCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBCCCHHHHHHHHHH
T ss_pred cCCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC--CCCCCCCCHHHHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999986 789999999999999999
Q ss_pred cCCCCCCCCCcccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHh--CCeEEEEecC-CcccccccCceEeC-C
Q 018104 204 KGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAK--QPVSVAIDAG-SSDFQFYSEGVFTG-E 279 (360)
Q Consensus 204 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~--gPV~v~~~~~-~~~f~~y~~Giy~~-~ 279 (360)
+ |+++|++|||.+..+.|.. . .....++.+|..++..++++|+++|.+ |||++++++. .++|++|++|+|.. .
T Consensus 86 ~-Gi~~e~~yPY~~~~~~C~~-~-~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~~ 162 (222)
T 3f5v_A 86 N-GVVQESYYRYVAREQSCRR-P-NAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRD 162 (222)
T ss_dssp H-CEEBGGGSCCCSSCCCCCC-C-SSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCC
T ss_pred c-CCCchhhCCCcccCCCccC-C-cCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecCC
Confidence 8 9999999999998899983 2 356788999999987889999999965 7999999984 25799999998743 3
Q ss_pred C-CCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeee
Q 018104 280 C-GTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIK 343 (360)
Q Consensus 280 ~-~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~ 343 (360)
+ ...++|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||++++.||++
T Consensus 163 ~~~~~~~HaV~iVGyg~~-~g~~ywivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~p~~ 222 (222)
T 3f5v_A 163 NGYQPNYHAVNIVGYSNA-QGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEEYPYVVIL 222 (222)
T ss_dssp CSSSCEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEEC
T ss_pred CCCCccCcEEEEEEEecc-CCCEEEEEEcCCCCCcccCCEEEEEcCC----CeecCCCceeEEeC
Confidence 3 4578999999999987 8899999999999999999999999993 67999999999975
No 36
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=2.8e-58 Score=424.11 Aligned_cols=216 Identities=31% Similarity=0.622 Sum_probs=179.8
Q ss_pred CCCCCceecCCC----CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcC--CccccCHHHHHhhcCC-CCCCCCCcchhh
Q 018104 124 TSIPPSVDWRKK----GSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTN--KLVSLSEQELVDCDTD-QNQGCNGGLMEL 196 (360)
Q Consensus 124 ~~lP~~~Dwr~~----g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~--~~~~lS~q~l~dc~~~-~~~gc~GG~~~~ 196 (360)
.+||++||||++ +.|+||||||.||||||||++++||++++++++ ..++||+|+|+||... .+.||+||++..
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~ 84 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAE 84 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHH
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHH
Confidence 369999999986 789999999999999999999999999999875 4799999999999863 368999999999
Q ss_pred HHHHHHHcCCCCC-------CCCCccc---------CCCCCcCCCC--------C-C--C-----CcEEecceEEcCCCh
Q 018104 197 AFEFIKKKGGVTT-------EAKYPYQ---------ANDGTCDVSK--------E-S--S-----PAVSIDGHENVPANH 244 (360)
Q Consensus 197 a~~~~~~~~Gi~~-------e~~yPY~---------~~~~~c~~~~--------~-~--~-----~~~~i~~~~~v~~~~ 244 (360)
|++|++++ |+++ |.+|||. +..+.|.... . . . .......+..++ .+
T Consensus 85 a~~y~~~~-Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~ 162 (266)
T 3cbj_A 85 AWNFWTRK-GLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NS 162 (266)
T ss_dssp HHHHHHHT-CBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSCCEECC-SC
T ss_pred HHHHHHHh-CcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeeeeeEEeC-CC
Confidence 99999997 9999 9999998 3345564210 0 0 0 001112233555 47
Q ss_pred HHHHHHHHH-hCCeEEEEecCCcccccccCceEeCCCCCC-CCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEE
Q 018104 245 EDALLKAVA-KQPVSVAIDAGSSDFQFYSEGVFTGECGTE-LNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQ 322 (360)
Q Consensus 245 ~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~-~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~ 322 (360)
+++|+++|. +|||+++|++. ++|+.|++|||...|+.. ++|||+|||||++ +|++|||||||||++||++|||||+
T Consensus 163 ~~~i~~~i~~~GPV~v~i~~~-~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~ 240 (266)
T 3cbj_A 163 EKDIMAEIYKNGPVEGAFSVY-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVE-NGTPYWLVANSWNTDWGDNGFFKIL 240 (266)
T ss_dssp HHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEE
T ss_pred HHHHHHHHHhcCCEEEEEEec-cchhhcCCeEEecCCCCccCCeEEEEEEeccc-CCceEEEEEcCCCCccCCCCEEEEE
Confidence 899999995 59999999997 689999999998876654 5999999999997 8899999999999999999999999
Q ss_pred ecCCCCCCCccccccceeeeecCCC
Q 018104 323 RGISDKKGLCGIAMEASYPIKKSAT 347 (360)
Q Consensus 323 ~~~~~~~~~Cgi~~~~~~~~~~~~~ 347 (360)
|+. |.|||++.+++++....+
T Consensus 241 rg~----n~cgI~~~~~~~~p~~~~ 261 (266)
T 3cbj_A 241 RGQ----DHCGIESEVVAGIPRTDQ 261 (266)
T ss_dssp CSS----CGGGTTTSCEECCBCCCC
T ss_pred cCC----CcccccCceEEEEeeccc
Confidence 984 569999999998876544
No 37
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=7.1e-58 Score=418.85 Aligned_cols=210 Identities=32% Similarity=0.661 Sum_probs=175.4
Q ss_pred CCCCceecCCC----CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcC--CccccCHHHHHhhcCCCCCCCCCcchhhHH
Q 018104 125 SIPPSVDWRKK----GSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTN--KLVSLSEQELVDCDTDQNQGCNGGLMELAF 198 (360)
Q Consensus 125 ~lP~~~Dwr~~----g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~--~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~ 198 (360)
+||++||||++ +.||||||||.||||||||++++||++++++++ ..++||+|+|+||....+.||+||++..|+
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~ 81 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCESCGLGCEGGILGPAW 81 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTTSBCTTBCBCHHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcCCCCCCCCCCHHHHH
Confidence 58999999997 689999999999999999999999999999976 689999999999986556899999999999
Q ss_pred HHHHHcCCCCCCCCC-------ccc---------CCCCCcCCCC----------CC---CCc----EEecceEEcCCChH
Q 018104 199 EFIKKKGGVTTEAKY-------PYQ---------ANDGTCDVSK----------ES---SPA----VSIDGHENVPANHE 245 (360)
Q Consensus 199 ~~~~~~~Gi~~e~~y-------PY~---------~~~~~c~~~~----------~~---~~~----~~i~~~~~v~~~~~ 245 (360)
+|++++ |+++|++| ||. +..+.|.... .. ... ........++ .++
T Consensus 82 ~yi~~~-Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~-~~~ 159 (254)
T 3qsd_A 82 DYWVKE-GIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVK-NDE 159 (254)
T ss_dssp HHHHHT-CBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECC-SCH
T ss_pred HHHHHc-CCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecC-CcH
Confidence 999998 99999888 996 3344553211 00 000 0011122444 378
Q ss_pred HHHHHHH-HhCCeEEEEecCCcccccccCceEeCCCCC-CCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEe
Q 018104 246 DALLKAV-AKQPVSVAIDAGSSDFQFYSEGVFTGECGT-ELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQR 323 (360)
Q Consensus 246 ~~i~~~l-~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 323 (360)
++|+++| .+|||+++|++. ++|++|++|||..++.. .++|||+|||||++ ++++|||||||||++||++|||||+|
T Consensus 160 ~~i~~~l~~~gPv~~~~~~~-~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~r 237 (254)
T 3qsd_A 160 KAIQKEIMKYGPVEAGFTVY-EDFLNYKSGIYKHITGETLGGHAIRIIGWGVE-NKAPYWLIANSWNEDWGENGYFRIVR 237 (254)
T ss_dssp HHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEEC
T ss_pred HHHHHHHHHcCCEEEEEEec-cccccccCCeeccCCCCCCCCeEEEEEEEeec-CCeeEEEEEeCCCCCcccCCeEEEEc
Confidence 9999999 569999999997 78999999999886654 45999999999997 88999999999999999999999999
Q ss_pred cCCCCCCCccccccceeee
Q 018104 324 GISDKKGLCGIAMEASYPI 342 (360)
Q Consensus 324 ~~~~~~~~Cgi~~~~~~~~ 342 (360)
+. |.|||+++++..+
T Consensus 238 g~----n~CgI~~~~~~~~ 252 (254)
T 3qsd_A 238 GR----DECSIESEVTAGR 252 (254)
T ss_dssp SS----CGGGTTSSEEEEE
T ss_pred CC----CeecCCCceEeec
Confidence 84 5699999988765
No 38
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=1.7e-57 Score=420.54 Aligned_cols=214 Identities=29% Similarity=0.585 Sum_probs=184.3
Q ss_pred CCCCCCCceecCCC---CCCCCCCCCC---CCCcHHHHHHHHHHHHHHHHhcC-C--ccccCHHHHHhhcCCCCCCCCCc
Q 018104 122 KVTSIPPSVDWRKK---GSVTAVKDQG---QCGSCWAFSTIAAVEGINHIMTN-K--LVSLSEQELVDCDTDQNQGCNGG 192 (360)
Q Consensus 122 ~~~~lP~~~Dwr~~---g~vtpV~dQg---~cGsCwAfA~~~~le~~~~~~~~-~--~~~lS~q~l~dc~~~~~~gc~GG 192 (360)
...+||++||||++ ++|+|||||| .||||||||++++||++++++++ . .++||+|+|+||.. ..||+||
T Consensus 32 ~~~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~--~~gC~GG 109 (277)
T 1deu_A 32 SPADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN--AGSCEGG 109 (277)
T ss_dssp CGGGSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS--SEETBEE
T ss_pred ccccCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC--CCCCCCC
Confidence 34579999999998 6899999999 99999999999999999999875 3 47999999999985 4799999
Q ss_pred chhhHHHHHHHcCCCCCCCCCcccCCCCCcCC-CC-------------CCCCcEEecceEEcCCChHHHHHHHH-HhCCe
Q 018104 193 LMELAFEFIKKKGGVTTEAKYPYQANDGTCDV-SK-------------ESSPAVSIDGHENVPANHEDALLKAV-AKQPV 257 (360)
Q Consensus 193 ~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~-~~-------------~~~~~~~i~~~~~v~~~~~~~i~~~l-~~gPV 257 (360)
++..|++|+.++ |+++|++|||...++.|.. .. .....+++..|..++ ++++|+++| .+|||
T Consensus 110 ~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~--~~~~i~~~i~~~GPV 186 (277)
T 1deu_A 110 NDLSVWDYAHQH-GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS--GREKMMAEIYANGPI 186 (277)
T ss_dssp CHHHHHHHHHHT-CBCBGGGSCCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEEC--SHHHHHHHHHHHCCE
T ss_pred CHHHHHHHHHHc-CCCcCccCCCcCCCCCccccccccccccCcccccccCcceEEeceeEecC--CHHHHHHHHHHcCCE
Confidence 999999999987 9999999999998888872 10 112346677787774 477899988 56999
Q ss_pred EEEEecCCcccccccCceEeCC-CCCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCC-----CCCCC
Q 018104 258 SVAIDAGSSDFQFYSEGVFTGE-CGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGIS-----DKKGL 331 (360)
Q Consensus 258 ~v~~~~~~~~f~~y~~Giy~~~-~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~-----~~~~~ 331 (360)
+++|++. .+|+.|++|||... +...++|||+|||||++ +|++|||||||||++||++|||||+|+.+ + ...
T Consensus 187 ~v~i~~~-~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~-~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~-~~~ 263 (277)
T 1deu_A 187 SCGIMAT-ERLANYTGGIYAEYQDTTYINHVVSVAGWGIS-DGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGA-RYN 263 (277)
T ss_dssp EEEECCC-HHHHTCCSSEECBCCSCCCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGG-GTB
T ss_pred EEEEecc-cccccCcCcEECCCCCCCcCCeEEEEEEeccc-CCccEEEEEeCCCCccCCCcEEEEEcCCCcccccc-ccc
Confidence 9999997 68999999999875 44568999999999998 89999999999999999999999999964 1 016
Q ss_pred ccccccceeeee
Q 018104 332 CGIAMEASYPIK 343 (360)
Q Consensus 332 Cgi~~~~~~~~~ 343 (360)
|||+++++|++.
T Consensus 264 cgIe~~~~~~~p 275 (277)
T 1deu_A 264 LAIEEHCTFGDP 275 (277)
T ss_dssp TTTTSCEEEEEE
T ss_pred ceeccccEeecc
Confidence 999999999875
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=8.4e-53 Score=387.86 Aligned_cols=214 Identities=25% Similarity=0.491 Sum_probs=167.9
Q ss_pred CceecCCC-CCCC--CCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCC-CCCCCCCcchh-hHHHHHH
Q 018104 128 PSVDWRKK-GSVT--AVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGCNGGLME-LAFEFIK 202 (360)
Q Consensus 128 ~~~Dwr~~-g~vt--pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~gc~GG~~~-~a~~~~~ 202 (360)
...|||++ |+++ ||||||.||||||||++++||++++++++..++||+|+|+||... ++.||+||... .++.|++
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 45799999 6887 999999999999999999999999999999999999999999864 47899999654 5567888
Q ss_pred HcCCCCCCCCCcccCC--CCCcCCCCC----------------CCCcEEecceEEcCCC----h----HHHHHHHHH-hC
Q 018104 203 KKGGVTTEAKYPYQAN--DGTCDVSKE----------------SSPAVSIDGHENVPAN----H----EDALLKAVA-KQ 255 (360)
Q Consensus 203 ~~~Gi~~e~~yPY~~~--~~~c~~~~~----------------~~~~~~i~~~~~v~~~----~----~~~i~~~l~-~g 255 (360)
+++|+++|++|||... .+.|..... .....++.+|..++.. + +++|+++|. +|
T Consensus 89 ~~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~G 168 (265)
T 2wbf_X 89 DYGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNKG 168 (265)
T ss_dssp HHCCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHHS
T ss_pred HcCCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHhcC
Confidence 8856999999999863 467865321 0123467778777542 3 478999995 59
Q ss_pred CeEEEEecCCccccccc-CceE-eCCCCC-CCCeEEEEEEeeec--CCC--ceEEEEEcCCCCCCCCCcEEEEEecCCCC
Q 018104 256 PVSVAIDAGSSDFQFYS-EGVF-TGECGT-ELNHGVAAVGYGTT--LDG--TKYWIVRNSWGPEWGEKGYIRMQRGISDK 328 (360)
Q Consensus 256 PV~v~~~~~~~~f~~y~-~Giy-~~~~~~-~~~Hav~iVGyg~~--~~g--~~ywivkNSWG~~WG~~Gy~~i~~~~~~~ 328 (360)
||+++|++. +|+.|+ +|++ ...|+. .++|||+|||||++ ++| ++|||||||||++|||+|||||+|+.
T Consensus 169 PV~v~i~~~--~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g--- 243 (265)
T 2wbf_X 169 SVIAYIKAE--NVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYG--- 243 (265)
T ss_dssp CEEEEECGG--GGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSC---
T ss_pred CEEEEEEcc--cccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecC---
Confidence 999999985 476664 4433 345664 68999999999985 355 68999999999999999999999864
Q ss_pred CCCccccccceeeeecCC
Q 018104 329 KGLCGIAMEASYPIKKSA 346 (360)
Q Consensus 329 ~~~Cgi~~~~~~~~~~~~ 346 (360)
.|.|||+..+.+++....
T Consensus 244 ~n~Cgi~~~~~~~~~~~~ 261 (265)
T 2wbf_X 244 PTHCHFNFIHSVVIFNVD 261 (265)
T ss_dssp CTTCSSCSCCEEEEECEE
T ss_pred CCccCcceeEEEEecccc
Confidence 356997776665554433
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=2.4e-50 Score=375.74 Aligned_cols=233 Identities=21% Similarity=0.274 Sum_probs=175.1
Q ss_pred CCeEEecccCCCCChhhhhhccccccccccccccccCCCcccccCC--CCCCCCceecCCCCCCCCCCCCCCCCcHHHHH
Q 018104 77 KPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGK--VTSIPPSVDWRKKGSVTAVKDQGQCGSCWAFS 154 (360)
Q Consensus 77 ~s~~~g~N~fsD~t~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA 154 (360)
+...-..|++.++..|.|+..+ +..++.+. ++... +.... ..+||++||||+++ ||||||.||||||||
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~l-G~~p~~~d-~rd~~----~~~~~~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFA 82 (291)
T 3ois_A 12 SGLVPRGSHMQTVLKRRKKSGY-GYIPDIAD-IRDFS----YTPEKSVIAALPPKVDLTPPF---QVYDQGRIGSCTANA 82 (291)
T ss_dssp -----------CCCCCCCCTTC-CEECCCCC-TTCCB----CCCCHHHHHTCCSEEECCCSS---CCCBCTTSSCHHHHH
T ss_pred cCcccchhhHhHhhhccccccC-CCCCCCCc-ccccc----cCCCccccccCCcceecccCC---CcccCCCCccHHHHH
Confidence 3445568899999999987665 45544331 11110 11111 24799999999984 999999999999999
Q ss_pred HHHHHHHHHHHhcCCccccCHHHHH--hhcCC--CC-CCCCCcchhhHHHHHHHcCCCCCCCCCcccCCC---CCcCCCC
Q 018104 155 TIAAVEGINHIMTNKLVSLSEQELV--DCDTD--QN-QGCNGGLMELAFEFIKKKGGVTTEAKYPYQAND---GTCDVSK 226 (360)
Q Consensus 155 ~~~~le~~~~~~~~~~~~lS~q~l~--dc~~~--~~-~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---~~c~~~~ 226 (360)
++++||++++ +++..+.||+|+|+ +|... ++ .+|.||++..|++|++++ ||++|++|||.+.+ +.|....
T Consensus 83 a~~alE~~~~-~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~-Gi~~e~~yPY~~~~~~~~~C~~~~ 160 (291)
T 3ois_A 83 LAAAIQFERI-HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKL-GVCPEKEWPYGDTPADPRTEEFPP 160 (291)
T ss_dssp HHHHHHHHHH-HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHT-CCCBGGGSCCCCCCCCTTTCSCCT
T ss_pred HHHHHHHHHH-HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHh-CCCCHhhCCCCCCccccccccccc
Confidence 9999999875 56777899999998 67631 23 468899999999999998 99999999999863 4565420
Q ss_pred ------C-------CCCcEEecceEEcCCChHHHHHHHHHh-CCeEEEEecCCcccccccC--ceEeCC-CCC--CCCeE
Q 018104 227 ------E-------SSPAVSIDGHENVPANHEDALLKAVAK-QPVSVAIDAGSSDFQFYSE--GVFTGE-CGT--ELNHG 287 (360)
Q Consensus 227 ------~-------~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~~~~~~~f~~y~~--Giy~~~-~~~--~~~Ha 287 (360)
. ....+++.+|..++. ++++|+++|++ |||+++|+++ ++|+.|++ |||..+ |.. .++||
T Consensus 161 ~~~~~~~p~~~C~~~~~~~~i~~y~~v~~-~e~~i~~al~~~gPV~v~~~~~-~~f~~y~~~~Gi~~~~~~~~~~~~~Ha 238 (291)
T 3ois_A 161 GAPASKKPSDQCYKDAQNYKITEYSRVAQ-DIDHLKACLAVGSPFVFGFSVY-NSWVGNNSLPVRIPLPTKNDTLEGGHA 238 (291)
T ss_dssp TCGGGSCCCHHHHHHHGGGCCCEEEECCS-CHHHHHHHHHTTCCEEEEEEEE-HHHHGGGCCCSBCCCCCTTSCEEEEEE
T ss_pred cccccCCCCHHHHhhcccceeccEEEcCc-CHHHHHHHHHcCCCEEEEEEec-cchhhcCCCCeEEeCCCCCCCCcCCeE
Confidence 0 113467889999976 78999999965 6999999997 78999998 999764 333 25999
Q ss_pred EEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecC
Q 018104 288 VAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGI 325 (360)
Q Consensus 288 v~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~ 325 (360)
|+|||||+ +++|||||||||++||++|||||+|+.
T Consensus 239 v~iVGy~~---~~~ywivkNSWG~~WG~~Gy~~i~~~~ 273 (291)
T 3ois_A 239 VLCVGYDD---EIRHFRIRNSWGNNVGEDGYFWMPYEY 273 (291)
T ss_dssp EEEEEEET---TTTEEEEECSBCTTSTBTTEEEEEHHH
T ss_pred EEEEEEeC---CCCEEEEEeCCCCCCCCCcEEEEEHHH
Confidence 99999984 478999999999999999999999985
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=6.5e-42 Score=330.95 Aligned_cols=209 Identities=18% Similarity=0.294 Sum_probs=161.9
Q ss_pred CCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHh-cCCccccCH----------------HHHHhhcCC---
Q 018104 125 SIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIM-TNKLVSLSE----------------QELVDCDTD--- 184 (360)
Q Consensus 125 ~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~-~~~~~~lS~----------------q~l~dc~~~--- 184 (360)
..|..|+++....+|||+|||.||+|||||+++++|+.++++ +++.++||+ |+++||...
T Consensus 47 ~~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~ 126 (453)
T 2cb5_A 47 RAQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEP 126 (453)
T ss_dssp HCCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCC
Confidence 357788999888899999999999999999999999999998 578999999 999999743
Q ss_pred ----------CCCCCCCcchhhHHHHHHHcCCCCCCCCCcccCCC---------------------------C------C
Q 018104 185 ----------QNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQAND---------------------------G------T 221 (360)
Q Consensus 185 ----------~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---------------------------~------~ 221 (360)
++.+|+||.+..+++++.++ |++++++|||+... + .
T Consensus 127 ~d~R~v~~l~~~~gcdGG~~~~a~~~i~ky-Gl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l~ 205 (453)
T 2cb5_A 127 EDGRLVQFLLMNPANDGGQWDMLVNIVEKY-GVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEIS 205 (453)
T ss_dssp TTSHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred cchhhHHHhcCCCCCCCCChHHHHHHHHHc-CccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 36899999999999999886 99999999998631 1 1
Q ss_pred ----------------c----------CCCCCC----------C-------CcE--EecceE------------------
Q 018104 222 ----------------C----------DVSKES----------S-------PAV--SIDGHE------------------ 238 (360)
Q Consensus 222 ----------------c----------~~~~~~----------~-------~~~--~i~~~~------------------ 238 (360)
| ...... + ... .+.+|.
T Consensus 206 ~~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~v 285 (453)
T 2cb5_A 206 ATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTV 285 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeEE
Confidence 4 110000 0 000 223333
Q ss_pred ---------------EcCCChH-HHHHHHHHh-CCeEEEEecCCcccccccCceEeCCCC--------------------
Q 018104 239 ---------------NVPANHE-DALLKAVAK-QPVSVAIDAGSSDFQFYSEGVFTGECG-------------------- 281 (360)
Q Consensus 239 ---------------~v~~~~~-~~i~~~l~~-gPV~v~~~~~~~~f~~y~~Giy~~~~~-------------------- 281 (360)
++|..++ +.++.+|.. +||++++++.. +.++++|||+.+|.
T Consensus 286 ~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~--~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~ 363 (453)
T 2cb5_A 286 EYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGK--HFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLT 363 (453)
T ss_dssp TTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTTT--TEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHH
T ss_pred eecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeCh--hhccCCcEEcCccccchhhcCccccccCHHHHhh
Confidence 3433232 445577766 69999999973 45569999987542
Q ss_pred ---CCCCeEEEEEEee--ecCCCc-eEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeeec
Q 018104 282 ---TELNHGVAAVGYG--TTLDGT-KYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKK 344 (360)
Q Consensus 282 ---~~~~Hav~iVGyg--~~~~g~-~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~~ 344 (360)
+..+|||+||||| .+.+|+ .|||||||||++||++|||+|+++ .+..+...+++.
T Consensus 364 ~~~s~~~HAmlivGyg~~~d~~G~~~yWiVkNSWG~~wG~~GY~~ms~~--------wf~ey~~~vvV~ 424 (453)
T 2cb5_A 364 FGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDE--------WFSEYVYEVVVD 424 (453)
T ss_dssp TTSCCCCEEEEEEEEEECTTSCSCEEEEEEECSBCTTSTBTTEEEEEHH--------HHHHHEEEEEEE
T ss_pred ccCCCCCeEEEEEEeccccccCCCccEEEEEcCcCCCcCcCceEEechh--------hHhhceEEEEec
Confidence 3579999999999 655787 999999999999999999999986 577777777663
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=5.7e-41 Score=324.66 Aligned_cols=209 Identities=17% Similarity=0.188 Sum_probs=150.0
Q ss_pred CCCCceecCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHh-cCCccccCH----------------HHHHhhcCC---
Q 018104 125 SIPPSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIM-TNKLVSLSE----------------QELVDCDTD--- 184 (360)
Q Consensus 125 ~lP~~~Dwr~~g~vtpV~dQg~cGsCwAfA~~~~le~~~~~~-~~~~~~lS~----------------q~l~dc~~~--- 184 (360)
..|..|+++....+|||||||.||+|||||+++++|+.++++ +++.++||+ |+|+||...
T Consensus 52 ~~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~ 131 (457)
T 2e01_A 52 QDNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDID 131 (457)
T ss_dssp HCCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTT
T ss_pred CCCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCccc
Confidence 357788988888999999999999999999999999999998 788999999 778999752
Q ss_pred --------CCCCCCCcchhhHHHHHHHcCCCCCCCCCcc-cCC---------------------------------C---
Q 018104 185 --------QNQGCNGGLMELAFEFIKKKGGVTTEAKYPY-QAN---------------------------------D--- 219 (360)
Q Consensus 185 --------~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY-~~~---------------------------------~--- 219 (360)
.+.+|+||.+..+++++.++ |++++++||| +.. .
T Consensus 132 ~r~v~~l~~~~gcdGG~~~~a~~~i~ky-Givpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l~ 210 (457)
T 2e01_A 132 SRLVQYLLAAPTEDGGQYSMFLNLVKKY-GLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIV 210 (457)
T ss_dssp SHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHH
T ss_pred chhhhhhccCCCCCCCCHHHHHHHHHHc-CccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhHH
Confidence 37899999999999999887 9999999999 310 0
Q ss_pred ------------------CCcCC----CC----------------C--------------------------CCCcEEe-
Q 018104 220 ------------------GTCDV----SK----------------E--------------------------SSPAVSI- 234 (360)
Q Consensus 220 ------------------~~c~~----~~----------------~--------------------------~~~~~~i- 234 (360)
+.|.. .. . ....+.+
T Consensus 211 ~~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~ve 290 (457)
T 2e01_A 211 TLREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKID 290 (457)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEET
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEEe
Confidence 01111 00 0 0000011
Q ss_pred ------c----ceEEcCCChH-HHHHHHHHh-CCeEEEEecCCcccccccCceEeCCC---------------------C
Q 018104 235 ------D----GHENVPANHE-DALLKAVAK-QPVSVAIDAGSSDFQFYSEGVFTGEC---------------------G 281 (360)
Q Consensus 235 ------~----~~~~v~~~~~-~~i~~~l~~-gPV~v~~~~~~~~f~~y~~Giy~~~~---------------------~ 281 (360)
. .|.++|.+.. +.++.+|.. +||++++++. .+.+|++|||+..| .
T Consensus 291 ~~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~--~~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~ 368 (457)
T 2e01_A 291 RLGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTP--KFMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHE 368 (457)
T ss_dssp TCCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTT--TTEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTS
T ss_pred ccCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcC--HhHcccCceecccccchhhcCcccccCHHHhhccCC
Confidence 0 1445544222 445666765 6999999997 47788999997654 2
Q ss_pred CCCCeEEEEEEeeecCCCc--eEEEEEcCCCCCCCCCcEEEEEecCCCCCCCccccccceeeeec
Q 018104 282 TELNHGVAAVGYGTTLDGT--KYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKK 344 (360)
Q Consensus 282 ~~~~Hav~iVGyg~~~~g~--~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~~~~~ 344 (360)
+..+|||+|||||.+.+|+ .|||||||||++||++|||+|+++ .+..++..+++.
T Consensus 369 s~~~HAmlivGyg~d~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~--------wf~ey~~~ivV~ 425 (457)
T 2e01_A 369 SLMTAAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVMTQK--------YFEEYCFQIVVD 425 (457)
T ss_dssp CCCCEEEEEEEEEECTTTCCEEEEEEECSSCTTSTBTTEEEEEHH--------HHHHHEEEEEEE
T ss_pred CCCCeEEEEEEEEeccCCCccCEEEEEeCccCCcCCCceEEeehh--------hHhhccEEEEec
Confidence 4579999999999876788 999999999999999999999996 577777777663
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=4.2e-36 Score=284.66 Aligned_cols=182 Identities=23% Similarity=0.333 Sum_probs=135.6
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHHHHHHHhcCCccccCHHHHHhhcCC-----------CCCCCCCcchhhHHHHHHHcC
Q 018104 137 SVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-----------QNQGCNGGLMELAFEFIKKKG 205 (360)
Q Consensus 137 ~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-----------~~~gc~GG~~~~a~~~~~~~~ 205 (360)
.++||||||.||||||||+++++|+.+++++++.++||+|+|++|+.. .+.+|+||.+..|++|+.++
T Consensus 21 ~vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~- 99 (383)
T 3pw3_A 21 PITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF- 99 (383)
T ss_dssp CCCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT-
T ss_pred CCCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc-
Confidence 489999999999999999999999999999999999999999999731 25799999999999999997
Q ss_pred CCCCCCCCc------ccCCC-----------------C-CcCC------CC---------------CCCCcE--------
Q 018104 206 GVTTEAKYP------YQAND-----------------G-TCDV------SK---------------ESSPAV-------- 232 (360)
Q Consensus 206 Gi~~e~~yP------Y~~~~-----------------~-~c~~------~~---------------~~~~~~-------- 232 (360)
|++++++|| +...+ . .... .. ..+..+
T Consensus 100 Givpe~~YP~~~~~~~~s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk~~T 179 (383)
T 3pw3_A 100 GLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYT 179 (383)
T ss_dssp CCCBGGGSCTTGGGTCSSCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTEEEC
T ss_pred CcCcHHhCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCCCcC
Confidence 999999999 22100 0 0000 00 000000
Q ss_pred ----------Eecc----------------------------eEEcCCChHHHHH----HHHHhC-CeEEEEecCCcccc
Q 018104 233 ----------SIDG----------------------------HENVPANHEDALL----KAVAKQ-PVSVAIDAGSSDFQ 269 (360)
Q Consensus 233 ----------~i~~----------------------------~~~v~~~~~~~i~----~~l~~g-PV~v~~~~~~~~f~ 269 (360)
.... +.++| ++.|+ .+|..| ||..+.++....|.
T Consensus 180 P~~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~Nvp---~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~ 256 (383)
T 3pw3_A 180 PKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLP---LDEFMEVFDNAINTGYTIAWGSDVSESGFT 256 (383)
T ss_dssp HHHHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEEEECC---HHHHHHHHHHHHHTTCCEEEEEECCSTTBC
T ss_pred HHHHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCccCCcC---HHHHHHHHHHHHHcCCcEEEEcccCccccC
Confidence 0011 22332 34444 445567 99999999844455
Q ss_pred cccCceEeCC-C----------------------------------------------CCCCCeEEEEEEeeecCCCceE
Q 018104 270 FYSEGVFTGE-C----------------------------------------------GTELNHGVAAVGYGTTLDGTKY 302 (360)
Q Consensus 270 ~y~~Giy~~~-~----------------------------------------------~~~~~Hav~iVGyg~~~~g~~y 302 (360)
+.||...+ . .+..+|||+|||||.+.+|++|
T Consensus 257 --~~Gi~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~~g~~y 334 (383)
T 3pw3_A 257 --RDGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEY 334 (383)
T ss_dssp --TTSEECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEECTTCCEE
T ss_pred --CCceeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEcCCCceE
Confidence 78887321 0 1234799999999987688999
Q ss_pred EEEEcCCCCCCCCCcEEEEEec
Q 018104 303 WIVRNSWGPEWGEKGYIRMQRG 324 (360)
Q Consensus 303 wivkNSWG~~WG~~Gy~~i~~~ 324 (360)
|+||||||++||++||++|+++
T Consensus 335 w~vkNSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 335 YMVKNSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp EEEECSBCSCSTTTTEEEEEHH
T ss_pred EEEEeCCCCCCCcCCeEEecHH
Confidence 9999999999999999999986
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.78 E-value=4.2e-19 Score=138.42 Aligned_cols=74 Identities=28% Similarity=0.533 Sum_probs=68.7
Q ss_pred CChhHHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHhhCCCCCCeEEecccCCCCChhhhhhccccccc
Q 018104 30 ESEEGLWDLYERWRSHH-TVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKI 103 (360)
Q Consensus 30 ~~~~~~~~~f~~~~~~~-k~Y~~~~E~~~R~~if~~n~~~I~~~N~~~~s~~~g~N~fsD~t~~Ef~~~~~~~~~ 103 (360)
.++..+...|++|+++| |.|.+.+|+.+|++||++|+++|++||+++.+|++|+|+|||||.+||++.+++.+.
T Consensus 16 ~~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~~~sy~lglN~FaDLT~eEF~~~~lg~~~ 90 (106)
T 3f75_P 16 WKEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQGYSYSLKMNHFGDLSRDEFRRKYLGFKK 90 (106)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTSCCSEEECCCTTTTCCHHHHHHHSCCBCC
T ss_pred cCcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCcccccCCHHHHHHHHcCCCC
Confidence 45678889999999999 999988999999999999999999999988899999999999999999999887654
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.69 E-value=1.1e-17 Score=124.62 Aligned_cols=64 Identities=19% Similarity=0.455 Sum_probs=57.9
Q ss_pred HHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHhhCCC----CCCeEEecccCCCCChhhhhhcccccc
Q 018104 37 DLYERWRSHH-TVSRSLDEKHKRFNVFKQNVMHVHQTNKM----DKPYKLKLNKFADMTNHEFASTYAGSK 102 (360)
Q Consensus 37 ~~f~~~~~~~-k~Y~~~~E~~~R~~if~~n~~~I~~~N~~----~~s~~~g~N~fsD~t~~Ef~~~~~~~~ 102 (360)
..|++|+.+| |.|.+.+|+.+| .||++|++.|++||++ +.+|++|+|+|+|||.+|| +.+++.+
T Consensus 8 ~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~ 76 (80)
T 2l95_A 8 EEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKK 76 (80)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSC
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCC
Confidence 4799999999 999878899999 9999999999999986 2789999999999999999 8777643
No 46
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=97.28 E-value=0.0058 Score=50.75 Aligned_cols=129 Identities=16% Similarity=0.187 Sum_probs=88.0
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHh--------cCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHHcCCCCCCCCC
Q 018104 142 KDQGQCGSCWAFSTIAAVEGINHIM--------TNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKY 213 (360)
Q Consensus 142 ~dQg~cGsCwAfA~~~~le~~~~~~--------~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~y 213 (360)
..||.-+-|-+|+.+++|.+..... ..-...+|+++|.++ |..+...++|++.. |...
T Consensus 25 ETQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~t---------~~~~~q~Iky~~s~-G~~~---- 90 (183)
T 1pxv_A 25 EQQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC---------ATFPNQMIEYGKSQ-GRDI---- 90 (183)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGGC---------CBCHHHHHHHHHHT-TCCC----
T ss_pred eccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc---------CCCHHHHHHHHHHc-CcCh----
Confidence 5799999999999999987654211 111356787777763 56788999999865 5321
Q ss_pred cccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHh-CCeEEEEecCCcccccccCceEeCCCCCCCCeEEEEEE
Q 018104 214 PYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAK-QPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVG 292 (360)
Q Consensus 214 PY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVG 292 (360)
.+.. .. -+.+++++.+.+ .||.+...-. +........+||++|||
T Consensus 91 -----------------~~~n----r~--ls~neV~~~i~~Nk~I~v~~~~v-----------~e~~~~~~~gHA~av~G 136 (183)
T 1pxv_A 91 -----------------HYQE----GV--PSYNQVDQLTKDNVGIMILAQSV-----------SQNPNDPHLGHALAVVG 136 (183)
T ss_dssp -----------------EEEE----SC--CCHHHHHHHHHTTCCEEEEEECC-----------CSSTTSCCCEEEEEEEE
T ss_pred -----------------hHhc----CC--CCHHHHHHHHhcCCcEEEEcccc-----------ccCCCCccCceeEEEEe
Confidence 0110 11 256788898865 5998876532 11223346799999999
Q ss_pred eeecCCCceEEEEEcCCCCCCCCCcEEEEEec
Q 018104 293 YGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRG 324 (360)
Q Consensus 293 yg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~ 324 (360)
|-.- ++.++.+|=|=| ++|++-++.+
T Consensus 137 ya~~-~~~~~y~~WNPW-----~~~~~~~~a~ 162 (183)
T 1pxv_A 137 NAKI-NDQEKLIYWNPW-----DTELSIQDAD 162 (183)
T ss_dssp EEEE-TTEEEEEEECTT-----CSSCEEEETT
T ss_pred eeec-CCCeEEEEeCCc-----cCCcEeecCC
Confidence 9986 588999998888 3488877754
No 47
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=97.15 E-value=0.013 Score=48.53 Aligned_cols=129 Identities=16% Similarity=0.239 Sum_probs=86.7
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHh--------cCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHHcCCCCCCCCC
Q 018104 142 KDQGQCGSCWAFSTIAAVEGINHIM--------TNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKY 213 (360)
Q Consensus 142 ~dQg~cGsCwAfA~~~~le~~~~~~--------~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~y 213 (360)
..||.-+-|-+||.+++|.+..... ..-...+|+++|..+ |..+...++|+++. |-..
T Consensus 16 ETQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~---------~~t~~e~iky~~s~-g~~~---- 81 (174)
T 1cv8_A 16 ETQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFT---------GLTPREMIYFGQTQ-GRSP---- 81 (174)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHC---------CCCHHHHHHHHHHT-TCCC----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhc---------CCCHHHHHHHHHHc-CCCh----
Confidence 5799999999999999987754211 112457999999855 34577889998876 3210
Q ss_pred cccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHhC-CeEEEEecCCcccccccCceEeCCCCCCCCeEEEEEE
Q 018104 214 PYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQ-PVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVG 292 (360)
Q Consensus 214 PY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~g-PV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVG 292 (360)
. ...+ . -+.+++++.+.++ |+.+..+-. + ...+...+|||+|||
T Consensus 82 -----------------~-~~n~---~--ls~~eV~~~~~~nk~i~i~~~~v-e-----------~~~~~~~gHAlav~G 126 (174)
T 1cv8_A 82 -----------------Q-LLNR---M--TTYNEVDNLTKNNKGIAILGSRV-E-----------SRNGMHAGHAMAVVG 126 (174)
T ss_dssp -----------------E-EESS---C--CCHHHHHHHHHTTCCEEEEEEES-S-----------CBTTBCCEEEEEEEE
T ss_pred -----------------h-hhcC---C--CCHHHHHHHHhcCCceEEEcccc-c-----------CCCCCCCceeEEEEe
Confidence 0 0000 1 1456788888664 988776543 1 111245799999999
Q ss_pred eeecCCCceEEEEEcCCCCCCCCCcEEEEEec
Q 018104 293 YGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRG 324 (360)
Q Consensus 293 yg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~ 324 (360)
|-.-.+|.+|.++=|=| +++.+-++-+
T Consensus 127 y~~~~ng~~~y~~WNPW-----~~~~~~~s~~ 153 (174)
T 1cv8_A 127 NAKLNNGQEVIIIWNPW-----DNGFMTQDAK 153 (174)
T ss_dssp EEEETTSCEEEEEECTT-----CSSCEEEETT
T ss_pred eeeecCCceEEEEeCCc-----cCCcEEecCC
Confidence 99865788999998888 3566655544
No 48
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=97.10 E-value=0.0089 Score=54.86 Aligned_cols=129 Identities=20% Similarity=0.259 Sum_probs=86.1
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHH--------hcCCccccCHHHHHhhcCCCCCCCCCcchhhHHHHHHHcCCCCCCCCC
Q 018104 142 KDQGQCGSCWAFSTIAAVEGINHI--------MTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKY 213 (360)
Q Consensus 142 ~dQg~cGsCwAfA~~~~le~~~~~--------~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~y 213 (360)
..||.-+-|-+||.+++|.+.... ...-...+|+++|.++ |..+...++|++.. |..
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~t---------s~~~~q~Iky~qsy-G~~----- 265 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC---------ATFPNQMIEYGKSQ-GRD----- 265 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGGC---------CCCHHHHHHHHHHT-TEE-----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc---------CCCHHHHHHHHHHh-Ccc-----
Confidence 569999999999999998764311 1112346777777763 55688899999854 531
Q ss_pred cccCCCCCcCCCCCCCCcEEecceEEcCCChHHHHHHHHHh-CCeEEEEecCCcccccccCceEeCCCCCCCCeEEEEEE
Q 018104 214 PYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAK-QPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVG 292 (360)
Q Consensus 214 PY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVG 292 (360)
+.-.... -+.+.+++.+.. .||.|.+....+. ..+...+|||+|||
T Consensus 266 --------------------~~~~n~~--ls~deVk~~id~Nk~I~v~~~~v~~~-----------~n~~~~gHAlavvG 312 (367)
T 1x9y_A 266 --------------------IHYQEGV--PSYNQVDQLTKDNVGIMILAQSVSQN-----------PNDPHLGHALAVVG 312 (367)
T ss_dssp --------------------EEEEESC--CCHHHHHHHHHTTCCEEEEEEETTSC-----------SSSCCCSEEEEEEE
T ss_pred --------------------hhhhcCC--CCHHHHHHHHhcCCcEEEEccccccC-----------CCCccCceeEEEEe
Confidence 1111111 145677888854 6999888764111 22346799999999
Q ss_pred eeecCCCceEEEEEcCCCCCCCCCcEEEEEec
Q 018104 293 YGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRG 324 (360)
Q Consensus 293 yg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~ 324 (360)
|-.. ++..|.++=|=| | ++++-++-.
T Consensus 313 yA~~-~~~~~y~~WNPW---~--~~~~~~sa~ 338 (367)
T 1x9y_A 313 NAKI-NDQEKLIYWNPW---D--TELSIQDAD 338 (367)
T ss_dssp EEEE-TTEEEEEEECTT---C--SSCEEEETT
T ss_pred cccc-CCCcEEEEecCc---c--CCceeecCC
Confidence 9776 588999998877 3 457766653
No 49
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=92.72 E-value=0.45 Score=41.86 Aligned_cols=63 Identities=24% Similarity=0.374 Sum_probs=38.8
Q ss_pred EcCCChHHHHHHHHHhC-CeEEEEecCCcccccccC---ceEeCCCC----CCCCeEEEEEEeeecCCCceEEEEEcCC
Q 018104 239 NVPANHEDALLKAVAKQ-PVSVAIDAGSSDFQFYSE---GVFTGECG----TELNHGVAAVGYGTTLDGTKYWIVRNSW 309 (360)
Q Consensus 239 ~v~~~~~~~i~~~l~~g-PV~v~~~~~~~~f~~y~~---Giy~~~~~----~~~~Hav~iVGyg~~~~g~~ywivkNSW 309 (360)
.+...+.++|++.|.+| ||+|-.... |..... -.|..+.+ ...+|+|+|+||+.+ ..+|-+.+
T Consensus 126 dltG~sl~~L~~~I~~G~PVIv~~t~~---~~p~~~~~~~~W~~~~G~~~~~~~~H~VVl~GYd~~-----~vyi~DP~ 196 (236)
T 3erv_A 126 DLTGKSIEELYKSVKAGQPVVIITNAT---FAPLDEDEFTTWETNNGDVSITYNEHCVVLIGYDQE-----SVYIRDPL 196 (236)
T ss_dssp ECTTSCHHHHHHHHHTTCCEEEEEETT---SSCCCGGGCEEEEETTEEEEECTTEEEEEEEEECSS-----EEEEECTT
T ss_pred ecCCCCHHHHHHHHHCCCeEEEEEeCC---cccccccccceeecCCCceeeccCCeEEEEEEEeCC-----EEEEECCC
Confidence 44455889999999888 999977553 221110 11211111 235899999999864 45565655
No 50
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=61.41 E-value=18 Score=33.81 Aligned_cols=55 Identities=20% Similarity=0.347 Sum_probs=37.6
Q ss_pred HHHHHHHHHhC-CeEEEEecCCcccccccCceEeCCCCCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEe
Q 018104 245 EDALLKAVAKQ-PVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQR 323 (360)
Q Consensus 245 ~~~i~~~l~~g-PV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 323 (360)
.+.|+..|.++ ||.+.-... ..+||.+|=||+.+ +||-|==.||-. .+|||.+.-
T Consensus 289 ~~~i~~eL~~~rPV~~~G~~~------------------~gGHAfV~DGy~~~----~~~H~NwGWgG~--~nGyy~l~~ 344 (371)
T 1dki_A 289 EAQIDKELSQNQPVYYQGVGK------------------VGGHAFVIDGADGR----NFYHVNWGWGGV--SDGFFRLDA 344 (371)
T ss_dssp HHHHHHHHHTTCCEEEEEEET------------------TEEEEEEEEEECSS----SEEEEECSSTTT--TCEEEESCC
T ss_pred HHHHHHHHHcCCCEEEEeecC------------------CCceEEEECcccCC----CeEEEEeCcCCC--CCcceeccC
Confidence 35677888665 987643211 16999999999854 577775555532 589999864
No 51
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=60.49 E-value=17 Score=33.24 Aligned_cols=59 Identities=19% Similarity=0.365 Sum_probs=37.8
Q ss_pred HHHHHHHHhC-CeEEEEecCCcccccccCceEeCCCCCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEe
Q 018104 246 DALLKAVAKQ-PVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQR 323 (360)
Q Consensus 246 ~~i~~~l~~g-PV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 323 (360)
+.|++.|.++ ||.+.-.-. .. . +...+||.+|=||+.+ +||-|==.||-. .+|||.+.-
T Consensus 239 ~~i~~eL~~~rPV~~~G~~~--~~------~-----~~~~GHafV~DGY~~~----~~~H~NwGWgG~--~nGyy~l~~ 298 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVSP--GS------M-----GQDAGHAFVIDGYNKA----GLVSVNWGWNGD--VDGYYKIDL 298 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC--------------------CCCEEEEEEEECTT----SCEEEECSSTTT--TCEEECCTT
T ss_pred HHHHHHHHhCCCEEEEEecC--CC------C-----CCCCceEEEEccccCC----CeEEEecCCCCC--CCceEeccC
Confidence 4678888665 987644221 11 0 1357999999999864 678776666522 489998864
No 52
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=57.08 E-value=19 Score=31.93 Aligned_cols=55 Identities=20% Similarity=0.346 Sum_probs=38.2
Q ss_pred HHHHHHHHHhC-CeEEEEecCCcccccccCceEeCCCCCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEe
Q 018104 245 EDALLKAVAKQ-PVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQR 323 (360)
Q Consensus 245 ~~~i~~~l~~g-PV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 323 (360)
.+.|++.|.++ ||.+.-.. ...+||.+|=||+.+ +|+-|==.||- -.+|||.+..
T Consensus 171 ~~~I~~eL~~grPV~~~G~~------------------~~gGHAwViDGY~~~----~~~H~NwGWgG--~~nGYy~l~~ 226 (261)
T 4d8b_A 171 EAQIDKELSQNQPVYYQGVG------------------KVGGHAFVIDGADGR----NFYHVNWGWGG--VSDGFFRLDA 226 (261)
T ss_dssp HHHHHHHHHTTCCEEEEEEE------------------TTEEEEEEEEEEESS----SCEEEECSSTT--TTCEEECTTC
T ss_pred HHHHHHHHHcCCCEEEEeec------------------CCCceEEEEcccccC----CEEEEEcCCCC--CCCceeeccc
Confidence 46788888665 99876521 146999999999854 57766444441 2689999854
No 53
>1jb0_F Photosystem 1 reaction centre subunit III; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: f.23.16.1 PDB: 3pcq_F*
Probab=42.61 E-value=18 Score=29.30 Aligned_cols=57 Identities=14% Similarity=0.179 Sum_probs=17.5
Q ss_pred ChhHHHHHHHHHHHH-HHhhcCccCCccccCChhHHHHHHHHHHHhc-cccCChHHHHHHHH
Q 018104 1 MKRVYLLAAFLLALV-LGIVEGFDFHEKELESEEGLWDLYERWRSHH-TVSRSLDEKHKRFN 60 (360)
Q Consensus 1 Mk~~l~~~~~~l~l~-~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~-k~Y~~~~E~~~R~~ 60 (360)
|++++.+++++.+++ +.+.+.+..+.-...++. ..|++=.++. |+-.+++.-..||+
T Consensus 1 Mrrl~~~~l~~~~~~~~~p~a~A~~agLtpC~es---~aF~kr~k~~~~~~~s~~~~k~RFe 59 (164)
T 1jb0_F 1 MRRFLALLLVLTLWLGFTPLASADVAGLVPCKDS---PAFQKRAAAAVNTTADPASGQKRFE 59 (164)
T ss_dssp -----------------------CGGGCEEGGGC---HHHHHHHHTCCCCSSSTTHHHHHHH
T ss_pred CchHHHHHHHHHHHHccCchhhhhhcCCccCcCC---HHHHHHHHhhccCCCChHHHHHHHH
Confidence 787765554443333 222222222222233332 2477766666 66555555555554
No 54
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=37.44 E-value=91 Score=28.48 Aligned_cols=72 Identities=19% Similarity=0.231 Sum_probs=0.0
Q ss_pred HHHHHHHHhC-CeEEEEecCCcccccccCceEeCCCCCCCCeEEEEEEeeec---CCCceEEEEEcCCC-CCCC------
Q 018104 246 DALLKAVAKQ-PVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTT---LDGTKYWIVRNSWG-PEWG------ 314 (360)
Q Consensus 246 ~~i~~~l~~g-PV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~---~~g~~ywivkNSWG-~~WG------ 314 (360)
+.|++++..| .|+.++.+....-... ....+-..+||-.|++.... ..+...-.|||-|| ..|-
T Consensus 211 ~~l~~~~~~g~l~~~s~~~t~~~~~~~-----~~~~GLv~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~~eW~G~wsd~ 285 (339)
T 2r9f_A 211 QIILKALERGSLLGCSINISDIRDLEA-----ITFKNLVRGHAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKGPWSDN 285 (339)
T ss_dssp HHHHHHHHHTCEEEEECCCSSSSTTCS-----BCTTSCBTTCCEEEEEEEEEEETTEEEEEEEEECTTSCCCCCSTTSTT
T ss_pred HHHHHHHHCCCeEEEEecCCCccchhh-----hhccCCcCCceEEEeEEEEEecCCCceEEEEEeCCCCCccccCCCCcC
Q ss_pred -------------------CCcEEEEE
Q 018104 315 -------------------EKGYIRMQ 322 (360)
Q Consensus 315 -------------------~~Gy~~i~ 322 (360)
++|-|||+
T Consensus 286 s~~W~~~~~~~~~~l~~~~~dG~FWMs 312 (339)
T 2r9f_A 286 SYEWNKVDPYEREQLRVKMEDGEFWMS 312 (339)
T ss_dssp CGGGGGSCHHHHHHHCCCCCSSEEEEE
T ss_pred CccccccCHHHHHHhCCCCCCCEEEEE
No 55
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=28.04 E-value=1.6e+02 Score=26.80 Aligned_cols=72 Identities=22% Similarity=0.333 Sum_probs=0.0
Q ss_pred HHHHHHHHhC-CeEEEEecCCcccccccCceEeCCCCCCCCeEEEEEEeeec---CCCceEEEEEcCCCC-----CCC--
Q 018104 246 DALLKAVAKQ-PVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTT---LDGTKYWIVRNSWGP-----EWG-- 314 (360)
Q Consensus 246 ~~i~~~l~~g-PV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~---~~g~~ywivkNSWG~-----~WG-- 314 (360)
+.|++++..| .|+.+..+....-..- ....+-..+||-.|++...- ..+...-.|||-||. .|.
T Consensus 210 ~~l~~~~~~g~l~~~~~~~t~~~~~e~-----~~~~GLv~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~~eW~G~wsd~ 284 (339)
T 1ziv_A 210 EILEKALKRGSLLGCFIDTRSAAESEA-----RTPFGLIKGHAYSVTGIDQVSFRGQRIELIRIRNPWGQVEWNGSWSDS 284 (339)
T ss_dssp HHHHHHHHHTCEEEEECCCSSGGGTTC-----BCTTSCBTTCCEEEEEEEEEEETTEEEEEEEEECCSSCCCCCSTTSTT
T ss_pred HHHHHHHhCCCeEEEEeccCCccchhh-----hhccCcccCeeEEEeEEEEEecCCCceEEEEecCCCCCCccCCCCCcC
Q ss_pred --------------------CCcEEEEE
Q 018104 315 --------------------EKGYIRMQ 322 (360)
Q Consensus 315 --------------------~~Gy~~i~ 322 (360)
++|-|||+
T Consensus 285 s~~W~~~~~~~~~~l~~~~~~dG~FWMs 312 (339)
T 1ziv_A 285 SPEWRSVGPAEQKRLCHTALDDGEFWMA 312 (339)
T ss_dssp CHHHHHSCHHHHHHTTCCCCSSSEEEEE
T ss_pred ChhccccCHHHHHHhhCCCCCCCEEEEE
No 56
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=22.42 E-value=32 Score=24.07 Aligned_cols=27 Identities=15% Similarity=0.035 Sum_probs=20.0
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHHHh
Q 018104 138 VTAVKDQGQCGSCWAFSTIAAVEGINHIM 166 (360)
Q Consensus 138 vtpV~dQg~cGsCwAfA~~~~le~~~~~~ 166 (360)
+--|+=||.|++| ......+|..+...
T Consensus 37 ~V~v~l~GaC~gc--~Tlk~gIe~~L~~~ 63 (74)
T 1th5_A 37 IVKVRLTGPAAVV--RTVRIAVSKKLREK 63 (74)
T ss_dssp EEEECCCSSSSSS--SSHHHHHHHHHHHH
T ss_pred EEEEEEecCCcch--HHHHHHHHHHHHHH
Confidence 4468999999999 45556888877643
Done!