Your job contains 1 sequence.
>018109
MFQLTGNSQVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYR
MDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAV
DTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTANDFGSEIIPASANEQFLK
AYLFNDYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPSKIDDSKIVDS
IISHGSFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGI
GENTKIKECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTVILKNSVITDGFVI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018109
(360 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2182132 - symbol:APL1 "ADP glucose pyrophospho... 1521 4.9e-156 1
TAIR|locus:2199241 - symbol:APL2 "ADPGLC-PPase large subu... 1264 8.4e-129 1
TAIR|locus:2049364 - symbol:APL4 species:3702 "Arabidopsi... 1177 1.4e-119 1
TAIR|locus:2136358 - symbol:APL3 species:3702 "Arabidopsi... 1166 2.0e-118 1
TAIR|locus:2156263 - symbol:ADG1 "ADP glucose pyrophospho... 972 7.4e-98 1
UNIPROTKB|P15280 - symbol:AGPS "Glucose-1-phosphate adeny... 957 2.9e-96 1
TAIR|locus:2032003 - symbol:APS2 "AT1G05610" species:3702... 576 6.8e-56 1
TIGR_CMR|SO_1498 - symbol:SO_1498 "glucose-1-phosphate ad... 331 5.6e-34 2
UNIPROTKB|Q9KLP4 - symbol:glgC2 "Glucose-1-phosphate aden... 320 9.1e-29 1
TIGR_CMR|VC_A0699 - symbol:VC_A0699 "glucose-1-phosphate ... 320 9.1e-29 1
UNIPROTKB|P0A6V1 - symbol:glgC "GlgC" species:83333 "Esch... 318 1.5e-28 1
UNIPROTKB|Q9KRB5 - symbol:glgC1 "Glucose-1-phosphate aden... 307 2.2e-27 1
TIGR_CMR|VC_1727 - symbol:VC_1727 "glucose-1-phosphate ad... 307 2.2e-27 1
UNIPROTKB|P64241 - symbol:glgC "Glucose-1-phosphate adeny... 254 1.6e-21 1
TIGR_CMR|BA_5122 - symbol:BA_5122 "glucose-1-phosphate ad... 180 9.0e-13 2
TIGR_CMR|CHY_0976 - symbol:CHY_0976 "glucose-1-phosphate ... 78 3.8e-05 3
DICTYBASE|DDB_G0287619 - symbol:gmppB "mannose-1-phosphat... 70 6.4e-05 3
>TAIR|locus:2182132 [details] [associations]
symbol:APL1 "ADP glucose pyrophosphorylase large subunit
1" species:3702 "Arabidopsis thaliana" [GO:0008878
"glucose-1-phosphate adenylyltransferase activity"
evidence=IEA;ISS;IDA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0006098 "pentose-phosphate
shunt" evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009637 "response to blue light" evidence=RCA] [GO:0009902
"chloroplast relocation" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0010114 "response to red
light" evidence=RCA] [GO:0010218 "response to far red light"
evidence=RCA] [GO:0015979 "photosynthesis" evidence=RCA]
[GO:0019684 "photosynthesis, light reaction" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA]
InterPro:IPR005835 InterPro:IPR005836 InterPro:IPR011004
InterPro:IPR011831 Pfam:PF00483 PROSITE:PS00808 PROSITE:PS00809
PROSITE:PS00810 UniPathway:UPA00152 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0009941 GO:GO:0005978
SUPFAM:SSF51161 EMBL:AC069326 GO:GO:0019252 eggNOG:COG0448
KO:K00975 GO:GO:0008878 TIGRFAMs:TIGR02091 BRENDA:2.7.7.27
OMA:FCNINEA EMBL:U72290 EMBL:AB022891 EMBL:X73367 EMBL:BT008884
EMBL:AF370503 IPI:IPI00537023 PIR:S42548 PIR:T52629
RefSeq:NP_197423.1 UniGene:At.31320 UniGene:At.429 UniGene:At.69509
ProteinModelPortal:P55229 SMR:P55229 STRING:P55229 PaxDb:P55229
PRIDE:P55229 EnsemblPlants:AT5G19220.1 GeneID:832042
KEGG:ath:AT5G19220 TAIR:At5g19220 HOGENOM:HOG000278604
InParanoid:P55229 PhylomeDB:P55229 ProtClustDB:PLN02241
BioCyc:ARA:AT5G19220-MONOMER BioCyc:MetaCyc:MONOMER-1823
Genevestigator:P55229 GermOnline:AT5G19220 Uniprot:P55229
Length = 522
Score = 1521 (540.5 bits), Expect = 4.9e-156, P = 4.9e-156
Identities = 287/355 (80%), Positives = 320/355 (90%)
Query: 6 GNSQVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMD 65
G +VLAATQTPGE+GKRWFQGTADAVRQFHWLFED R+K IEDVLILSGDHLYRMDYMD
Sbjct: 168 GYVEVLAATQTPGESGKRWFQGTADAVRQFHWLFEDARSKDIEDVLILSGDHLYRMDYMD 227
Query: 66 FVQNHRQSGADITISCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVL 125
F+Q+HRQSGADI+ISC+P+DD RASDFGLMKI+++GRV+SFSEKPKG DLKAMAVDTT+L
Sbjct: 228 FIQDHRQSGADISISCIPIDDRRASDFGLMKIDDKGRVISFSEKPKGDDLKAMAVDTTIL 287
Query: 126 GLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTANDFGSEIIPASANEQFLKAYLFN 185
GLSK+EAE+KPYIASMGVY+FKKEILLNLLRWRFPTANDFGSEIIP SA E ++ AYLFN
Sbjct: 288 GLSKEEAEKKPYIASMGVYVFKKEILLNLLRWRFPTANDFGSEIIPFSAKEFYVNAYLFN 347
Query: 186 DYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHG 245
DYWEDIGTIRSFFEANLALT HP FSFYDA KPIYTSRRNLPP HG
Sbjct: 348 DYWEDIGTIRSFFEANLALTEHPGAFSFYDAAKPIYTSRRNLPPSKIDNSKLIDSIISHG 407
Query: 246 SFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTK 305
SF+T+ IEHS+VGIRSR+ +NV LKDT+MLGAD+YET+AEVA+LLAEG VP+GIGENTK
Sbjct: 408 SFLTNCLIEHSIVGIRSRVGSNVQLKDTVMLGADYYETEAEVAALLAEGNVPIGIGENTK 467
Query: 306 IKECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTVILKNSVITDGFVI 360
I+ECIIDKNAR+GKNVIIANSEGIQEADRS++GFYIRSG+TVILKNSVI DG VI
Sbjct: 468 IQECIIDKNARVGKNVIIANSEGIQEADRSSDGFYIRSGITVILKNSVIKDGVVI 522
>TAIR|locus:2199241 [details] [associations]
symbol:APL2 "ADPGLC-PPase large subunit" species:3702
"Arabidopsis thaliana" [GO:0008878 "glucose-1-phosphate
adenylyltransferase activity" evidence=IEA;ISS;IDA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0019252 "starch biosynthetic process"
evidence=TAS] InterPro:IPR005835 InterPro:IPR005836
InterPro:IPR011004 InterPro:IPR011831 Pfam:PF00483 PROSITE:PS00808
PROSITE:PS00809 PROSITE:PS00810 UniPathway:UPA00152 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0009507 GO:GO:0005978
EMBL:AC012375 SUPFAM:SSF51161 GO:GO:0019252 eggNOG:COG0448
KO:K00975 OMA:PAKFVHE GO:GO:0008878 TIGRFAMs:TIGR02091
BRENDA:2.7.7.27 HOGENOM:HOG000278604 ProtClustDB:PLN02241
EMBL:AY063927 EMBL:AY091251 EMBL:X73366 IPI:IPI00518848 PIR:G86401
RefSeq:NP_174089.1 UniGene:At.16637 ProteinModelPortal:P55230
SMR:P55230 STRING:P55230 PaxDb:P55230 PRIDE:P55230
EnsemblPlants:AT1G27680.1 GeneID:839660 KEGG:ath:AT1G27680
TAIR:At1g27680 InParanoid:P55230 PhylomeDB:P55230
Genevestigator:P55230 GermOnline:AT1G27680 Uniprot:P55230
Length = 518
Score = 1264 (450.0 bits), Expect = 8.4e-129, P = 8.4e-129
Identities = 233/355 (65%), Positives = 286/355 (80%)
Query: 6 GNSQVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMD 65
G +VLAATQT G+AGK+WFQGTADAVRQF W+FED + K +E VLILSGDHLYRMDYM+
Sbjct: 164 GFVEVLAATQTSGDAGKKWFQGTADAVRQFIWVFEDAKTKNVEHVLILSGDHLYRMDYMN 223
Query: 66 FVQNHRQSGADITISCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVL 125
FVQ H +S ADIT+SCLPMD+SRASDFGL+KI+ G+++ FSEKPKG DLKAM VDT++L
Sbjct: 224 FVQKHIESNADITVSCLPMDESRASDFGLLKIDQSGKIIQFSEKPKGDDLKAMQVDTSIL 283
Query: 126 GLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTANDFGSEIIPASANEQFLKAYLFN 185
GL +EA E PYIASMGVY+F+KE+LL LLR +PT+NDFGSEIIP + E ++A+LFN
Sbjct: 284 GLPPKEAAESPYIASMGVYVFRKEVLLKLLRSSYPTSNDFGSEIIPLAVGEHNVQAFLFN 343
Query: 186 DYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHG 245
DYWEDIGTI SFF+ANLALT PP F FYD P +TS R LPP HG
Sbjct: 344 DYWEDIGTIGSFFDANLALTEQPPKFQFYDQKTPFFTSPRFLPPTKVDKCRILDSIVSHG 403
Query: 246 SFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTK 305
F+ ++HS+VGIRSR+ + V L+DTMM+GADFY+T+AE+ASLLAEG+VPVG+G+NTK
Sbjct: 404 CFLRECSVQHSIVGIRSRLESGVELQDTMMMGADFYQTEAEIASLLAEGKVPVGVGQNTK 463
Query: 306 IKECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTVILKNSVITDGFVI 360
IK CIIDKNA+IGKNV+IAN++G++E DR EGF+IRSG+TV+LKN+ I DG I
Sbjct: 464 IKNCIIDKNAKIGKNVVIANADGVEEGDRPEEGFHIRSGITVVLKNATIRDGLHI 518
>TAIR|locus:2049364 [details] [associations]
symbol:APL4 species:3702 "Arabidopsis thaliana"
[GO:0008878 "glucose-1-phosphate adenylyltransferase activity"
evidence=IEA;ISS;IDA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0010170
"glucose-1-phosphate adenylyltransferase complex" evidence=IDA]
[GO:0019252 "starch biosynthetic process" evidence=RCA;TAS]
[GO:0009853 "photorespiration" evidence=RCA] InterPro:IPR005835
InterPro:IPR005836 InterPro:IPR011004 InterPro:IPR011831
Pfam:PF00483 PROSITE:PS00808 PROSITE:PS00809 PROSITE:PS00810
UniPathway:UPA00152 GO:GO:0005524 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005978 SUPFAM:SSF51161
EMBL:AC007119 GO:GO:0019252 eggNOG:COG0448 KO:K00975 GO:GO:0008878
TIGRFAMs:TIGR02091 BRENDA:2.7.7.27 HOGENOM:HOG000278604
ProtClustDB:PLN02241 EMBL:AY070429 EMBL:AY096657 IPI:IPI00523462
PIR:A84603 RefSeq:NP_001031391.1 RefSeq:NP_179753.1
UniGene:At.28357 ProteinModelPortal:Q9SIK1 SMR:Q9SIK1 IntAct:Q9SIK1
STRING:Q9SIK1 PaxDb:Q9SIK1 PRIDE:Q9SIK1 EnsemblPlants:AT2G21590.1
EnsemblPlants:AT2G21590.2 GeneID:816697 KEGG:ath:AT2G21590
TAIR:At2g21590 InParanoid:Q9SIK1 OMA:EANMELI PhylomeDB:Q9SIK1
Genevestigator:Q9SIK1 GermOnline:AT2G21590 GO:GO:0010170
Uniprot:Q9SIK1
Length = 523
Score = 1177 (419.4 bits), Expect = 1.4e-119, P = 1.4e-119
Identities = 219/355 (61%), Positives = 278/355 (78%)
Query: 6 GNSQVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMD 65
G +VLAATQTPGEAGK+WFQGTADAVR+F W+FED +N+ IE++LILSGDHLYRM+YMD
Sbjct: 169 GFVEVLAATQTPGEAGKKWFQGTADAVRKFLWVFEDAKNRNIENILILSGDHLYRMNYMD 228
Query: 66 FVQNHRQSGADITISCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVL 125
FVQ+H S ADIT+SC P+ +SRAS+FGL+KI+ GRV+ FSEKP G DLK+M DTT+L
Sbjct: 229 FVQSHVDSNADITLSCAPVSESRASNFGLVKIDRGGRVIHFSEKPTGVDLKSMQTDTTML 288
Query: 126 GLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTANDFGSEIIPASANEQFLKAYLFN 185
GLS QEA + PYIASMGVY FK E LLNLL ++P++NDFGSE+IPA+ + ++ Y+F
Sbjct: 289 GLSHQEATDSPYIASMGVYCFKTEALLNLLTRQYPSSNDFGSEVIPAAIRDHDVQGYIFR 348
Query: 186 DYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHG 245
DYWEDIGTI++F+EANLAL P F FYD P YTS R LPP HG
Sbjct: 349 DYWEDIGTIKTFYEANLALVEERPKFEFYDPETPFYTSPRFLPPTKAEKCRMVDSIISHG 408
Query: 246 SFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTK 305
F+ ++ S++G RSR++ V L+DT+MLGAD+Y+T++E+ASLLAEG+VP+GIG++TK
Sbjct: 409 CFLRECSVQRSIIGERSRLDYGVELQDTLMLGADYYQTESEIASLLAEGKVPIGIGKDTK 468
Query: 306 IKECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTVILKNSVITDGFVI 360
I++CIIDKNA+IGKNVII N +QEADR EGFYIRSG+TVI++ + I DG VI
Sbjct: 469 IRKCIIDKNAKIGKNVIIMNKGDVQEADRPEEGFYIRSGITVIVEKATIQDGTVI 523
>TAIR|locus:2136358 [details] [associations]
symbol:APL3 species:3702 "Arabidopsis thaliana"
[GO:0008878 "glucose-1-phosphate adenylyltransferase activity"
evidence=IEA;ISS] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA;TAS] InterPro:IPR005835 InterPro:IPR005836
InterPro:IPR011004 InterPro:IPR011831 Pfam:PF00483 PROSITE:PS00808
PROSITE:PS00809 PROSITE:PS00810 UniPathway:UPA00152 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005978
EMBL:AL161594 EMBL:AL050351 SUPFAM:SSF51161 GO:GO:0019252
eggNOG:COG0448 KO:K00975 GO:GO:0008878 TIGRFAMs:TIGR02091
OMA:SKNHIAP BRENDA:2.7.7.27 HOGENOM:HOG000278604
ProtClustDB:PLN02241 EMBL:Y18432 EMBL:AY059862 EMBL:BT010378
EMBL:X73364 IPI:IPI00547760 PIR:T08569 RefSeq:NP_195632.1
UniGene:At.75 ProteinModelPortal:P55231 SMR:P55231 STRING:P55231
PaxDb:P55231 PRIDE:P55231 EnsemblPlants:AT4G39210.1 GeneID:830076
KEGG:ath:AT4G39210 TAIR:At4g39210 InParanoid:P55231
PhylomeDB:P55231 Genevestigator:P55231 GermOnline:AT4G39210
Uniprot:P55231
Length = 521
Score = 1166 (415.5 bits), Expect = 2.0e-118, P = 2.0e-118
Identities = 215/355 (60%), Positives = 275/355 (77%)
Query: 6 GNSQVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMD 65
G +VLAATQTPGEAGK+WFQGTADAVR+F W+FED +N+ IE+++ILSGDHLYRM+YMD
Sbjct: 167 GFVEVLAATQTPGEAGKKWFQGTADAVRKFLWVFEDAKNRNIENIIILSGDHLYRMNYMD 226
Query: 66 FVQNHRQSGADITISCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVL 125
FVQ+H S ADIT+SC P+D+SRAS++GL+ I+ GRV+ FSEKP G DLK+M DTT+
Sbjct: 227 FVQHHVDSKADITLSCAPVDESRASEYGLVNIDRSGRVVHFSEKPTGIDLKSMQTDTTMH 286
Query: 126 GLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTANDFGSEIIPASANEQFLKAYLFN 185
GLS QEA + PYIASMGVY FK E LL LL WR+P++NDFGSEIIPA+ + ++ Y++
Sbjct: 287 GLSHQEAAKSPYIASMGVYCFKTEALLKLLTWRYPSSNDFGSEIIPAAIKDHNVQGYIYR 346
Query: 186 DYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHG 245
DYWEDIGTI+SF+EAN+AL P F FYD P YTS R LPP HG
Sbjct: 347 DYWEDIGTIKSFYEANIALVEEHPKFEFYDQNTPFYTSPRFLPPTKTEKCRIVNSVISHG 406
Query: 246 SFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTK 305
F+ I+ S++G RSR++ V L+DT+MLGAD Y+T++E+ASLLAEG VP+GIG +TK
Sbjct: 407 CFLGECSIQRSIIGERSRLDYGVELQDTLMLGADSYQTESEIASLLAEGNVPIGIGRDTK 466
Query: 306 IKECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTVILKNSVITDGFVI 360
I++CIIDKNA+IGKNV+I N + ++EADR EGFYIRSG+TV+++ + I DG VI
Sbjct: 467 IRKCIIDKNAKIGKNVVIMNKDDVKEADRPEEGFYIRSGITVVVEKATIKDGTVI 521
>TAIR|locus:2156263 [details] [associations]
symbol:ADG1 "ADP glucose pyrophosphorylase 1"
species:3702 "Arabidopsis thaliana" [GO:0008878
"glucose-1-phosphate adenylyltransferase activity"
evidence=IEA;ISS;IMP;IDA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0048046
"apoplast" evidence=IDA] [GO:0019252 "starch biosynthetic process"
evidence=RCA;IMP;TAS] [GO:0048573 "photoperiodism, flowering"
evidence=IMP] [GO:0000023 "maltose metabolic process" evidence=RCA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0009637
"response to blue light" evidence=RCA] [GO:0009644 "response to
high light intensity" evidence=RCA] [GO:0009744 "response to
sucrose stimulus" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010114 "response to red light"
evidence=RCA] [GO:0010155 "regulation of proton transport"
evidence=RCA] [GO:0010218 "response to far red light" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0019760
"glucosinolate metabolic process" evidence=RCA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0043085
"positive regulation of catalytic activity" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0030931
"heterotetrameric ADPG pyrophosphorylase complex" evidence=IMP]
InterPro:IPR005835 InterPro:IPR005836 InterPro:IPR011004
InterPro:IPR011831 Pfam:PF00483 PROSITE:PS00808 PROSITE:PS00809
PROSITE:PS00810 UniPathway:UPA00152 GO:GO:0005829 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0048046
GO:GO:0005978 GO:GO:0048573 EMBL:AP000372 SUPFAM:SSF51161
GO:GO:0009501 GO:GO:0019252 eggNOG:COG0448 KO:K00975 GO:GO:0008878
TIGRFAMs:TIGR02091 BRENDA:2.7.7.27 HOGENOM:HOG000278604
ProtClustDB:PLN02241 EMBL:U72351 EMBL:U70616 EMBL:AB039889
EMBL:AY049265 EMBL:AY065428 EMBL:AY090283 EMBL:AY096379 EMBL:X73365
IPI:IPI00542391 RefSeq:NP_199641.1 UniGene:At.670
ProteinModelPortal:P55228 SMR:P55228 IntAct:P55228 STRING:P55228
PaxDb:P55228 PRIDE:P55228 EnsemblPlants:AT5G48300.1 GeneID:834883
KEGG:ath:AT5G48300 TAIR:At5g48300 InParanoid:P55228 OMA:DEESAHD
PhylomeDB:P55228 BioCyc:MetaCyc:MONOMER-1822 Genevestigator:P55228
GermOnline:AT5G48300 GO:GO:0030931 Uniprot:P55228
Length = 520
Score = 972 (347.2 bits), Expect = 7.4e-98, P = 7.4e-98
Identities = 189/357 (52%), Positives = 257/357 (71%)
Query: 6 GNSQVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMD 65
G +VLAA Q+P WFQGTADAVRQ+ WLFE+ + V+E LIL+GDHLYRMDY
Sbjct: 169 GFVEVLAAQQSP--ENPNWFQGTADAVRQYLWLFEE--HNVLE-YLILAGDHLYRMDYEK 223
Query: 66 FVQNHRQSGADITISCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVL 125
F+Q HR++ ADIT++ LPMD+ RA+ FGLMKI+ EGR++ F+EKPKG+ LKAM VDTT+L
Sbjct: 224 FIQAHRETDADITVAALPMDEQRATAFGLMKIDEEGRIIEFAEKPKGEHLKAMKVDTTIL 283
Query: 126 GLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTANDFGSEIIPASANEQF-LKAYLF 184
GL Q A+E P+IASMG+Y+ ++++L+LLR +FP ANDFGSE+IP + + ++AYL+
Sbjct: 284 GLDDQRAKEMPFIASMGIYVVSRDVMLDLLRNQFPGANDFGSEVIPGATSLGLRVQAYLY 343
Query: 185 NDYWEDIGTIRSFFEANLALTAHP-PMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXX 243
+ YWEDIGTI +F+ ANL +T P P FSFYD + PIYT R LPP
Sbjct: 344 DGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIG 403
Query: 244 HGSFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGEN 303
G I + I HSVVG+RS I+ ++D++++GAD+YET E + L A+G VP+GIG+N
Sbjct: 404 EGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETATEKSLLSAKGSVPIGIGKN 463
Query: 304 TKIKECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTVILKNSVITDGFVI 360
+ IK IIDKNARIG NV I NS+ +QEA R +G++I+SG+ ++K+++I G VI
Sbjct: 464 SHIKRAIIDKNARIGDNVKIINSDNVQEAARETDGYFIKSGIVTVIKDALIPTGTVI 520
>UNIPROTKB|P15280 [details] [associations]
symbol:AGPS "Glucose-1-phosphate adenylyltransferase small
subunit, chloroplastic/amyloplastic" species:39947 "Oryza sativa
Japonica Group" [GO:0005982 "starch metabolic process"
evidence=IEP] InterPro:IPR005835 InterPro:IPR005836
InterPro:IPR011004 InterPro:IPR011831 Pfam:PF00483 PROSITE:PS00808
PROSITE:PS00809 PROSITE:PS00810 UniPathway:UPA00152 GO:GO:0005524
GO:GO:0009570 GO:GO:0048046 GO:GO:0005978 GO:GO:0048573
EMBL:AP008214 SUPFAM:SSF51161 GO:GO:0009501 GO:GO:0005982
GO:GO:0019252 eggNOG:COG0448 KO:K00975 GO:GO:0008878
TIGRFAMs:TIGR02091 BRENDA:2.7.7.27 HOGENOM:HOG000278604
ProtClustDB:PLN02241 OMA:DEESAHD GO:GO:0030931 EMBL:J04960
EMBL:M31616 EMBL:D83539 EMBL:EF122437 EMBL:AP004459 EMBL:AK071826
EMBL:AK103906 EMBL:AF378188 PIR:A34318 PIR:JU0444
RefSeq:NP_001061603.1 UniGene:Os.178 ProteinModelPortal:P15280
SMR:P15280 STRING:P15280 EnsemblPlants:LOC_Os08g25734.1
GeneID:4345339 KEGG:osa:4345339 Gramene:P15280 Uniprot:P15280
Length = 514
Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
Identities = 185/357 (51%), Positives = 253/357 (70%)
Query: 6 GNSQVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMD 65
G +VLAA Q+P WFQGTADAVRQ+ WLFE+ + V+E LIL+GDHLYRMDY
Sbjct: 163 GFVEVLAAQQSPDNPN--WFQGTADAVRQYLWLFEE--HNVME-FLILAGDHLYRMDYEK 217
Query: 66 FVQNHRQSGADITISCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVL 125
F+Q HR++ +DIT++ LPMD+ RA+ FGLMKI+ EGR++ F+EKPKG+ LKAM VDTT+L
Sbjct: 218 FIQAHRETDSDITVAALPMDEKRATAFGLMKIDEEGRIVEFAEKPKGEQLKAMMVDTTIL 277
Query: 126 GLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTANDFGSEIIPASANEQF-LKAYLF 184
GL A+E PYIASMG+Y+ K ++L LLR +FP ANDFGSE+IP + N ++AYL+
Sbjct: 278 GLDDVRAKEMPYIASMGIYVISKNVMLQLLREQFPGANDFGSEVIPGATNIGMRVQAYLY 337
Query: 185 NDYWEDIGTIRSFFEANLALTAHP-PMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXX 243
+ YWEDIGTI +F+ ANL +T P P FSFYD + PIYT R+LPP
Sbjct: 338 DGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRHLPPSKVLDADVTDSVIG 397
Query: 244 HGSFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGEN 303
G I + I HSVVG+RS I+ ++D++++GAD+YET+A+ L +G +P+GIG+N
Sbjct: 398 EGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETEADKKLLGEKGGIPIGIGKN 457
Query: 304 TKIKECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTVILKNSVITDGFVI 360
I+ IIDKNARIG NV I N + +QEA R +G++I+SG+ ++K++++ G VI
Sbjct: 458 CHIRRAIIDKNARIGDNVKIINVDNVQEAARETDGYFIKSGIVTVIKDALLPSGTVI 514
>TAIR|locus:2032003 [details] [associations]
symbol:APS2 "AT1G05610" species:3702 "Arabidopsis
thaliana" [GO:0008878 "glucose-1-phosphate adenylyltransferase
activity" evidence=ISS] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] InterPro:IPR005835 InterPro:IPR005836
InterPro:IPR011004 Pfam:PF00483 PROSITE:PS00809 EMBL:CP002684
GO:GO:0005978 SUPFAM:SSF51161 KO:K00975 GO:GO:0008878
IPI:IPI00524967 RefSeq:NP_172052.2 ProteinModelPortal:F4I8U2
SMR:F4I8U2 PRIDE:F4I8U2 EnsemblPlants:AT1G05610.1 GeneID:837066
KEGG:ath:AT1G05610 OMA:KVGVLTQ ArrayExpress:F4I8U2 Uniprot:F4I8U2
Length = 476
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 127/356 (35%), Positives = 209/356 (58%)
Query: 9 QVLAATQTPGEAGKRWFQGTADAVRQFHWLFED-PRNKVIEDVLILSGDHLYRMDYMDFV 67
+V+AA Q+ + G WFQGTADA+R+ W+FE+ P + + L+L G HLY+MDY +
Sbjct: 135 EVIAAYQSLEDQG--WFQGTADAIRRCLWVFEEFP----VTEFLVLPGHHLYKMDYKMLI 188
Query: 68 QNHRQSGADITISCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGL 127
++HR+S ADITI L FG M++++ V F+ K + +DL ++A T
Sbjct: 189 EDHRRSRADITIVGLSSVTDHDFGFGFMEVDSTNAVTRFTIKGQ-QDLISVANRTA---- 243
Query: 128 SKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTANDFGSEIIPASANEQF-LKAYLFND 186
++ + + S G+Y+ +E ++ LLR + D SEIIP + +E +KA++F+
Sbjct: 244 TRSDGTSSCSVPSAGIYVIGREQMVKLLRECLIKSKDLASEIIPGAISEGMKVKAHMFDG 303
Query: 187 YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHGS 246
YWED+ +I +++ AN+ + FYD P+YT R LPP G
Sbjct: 304 YWEDVRSIGAYYRANMESIKS---YRFYDRQCPLYTMPRCLPPSSMSVAVITNSIIGDGC 360
Query: 247 FITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPV--GIGENT 304
+ I SVVG+R+RI V ++D++++G+D YE + +V E ++ + GIGE +
Sbjct: 361 ILDKCVIRGSVVGMRTRIADEVIVEDSIIVGSDIYEMEEDVRRKGKEKKIEIRIGIGEKS 420
Query: 305 KIKECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTVILKNSVITDGFVI 360
+I+ I+DKNARIGKNV+I N + ++E +R A+G+ IR G+ +IL+N+VI + ++
Sbjct: 421 RIRRAIVDKNARIGKNVMIINRDNVEEGNREAQGYVIREGIIIILRNAVIPNDSIL 476
>TIGR_CMR|SO_1498 [details] [associations]
symbol:SO_1498 "glucose-1-phosphate adenylyltransferase"
species:211586 "Shewanella oneidensis MR-1" [GO:0005978 "glycogen
biosynthetic process" evidence=ISS] [GO:0008878
"glucose-1-phosphate adenylyltransferase activity" evidence=ISS]
InterPro:IPR005835 InterPro:IPR005836 InterPro:IPR011004
InterPro:IPR011831 InterPro:IPR023049 Pfam:PF00483 PROSITE:PS00808
PROSITE:PS00809 PROSITE:PS00810 UniPathway:UPA00164 HAMAP:MF_00624
GO:GO:0005524 GO:GO:0005978 EMBL:AE014299 GenomeReviews:AE014299_GR
SUPFAM:SSF51161 eggNOG:COG0448 KO:K00975 GO:GO:0008878
TIGRFAMs:TIGR02091 ProtClustDB:PRK00725 HOGENOM:HOG000278603
RefSeq:NP_717115.1 ProteinModelPortal:Q8EGU3 SMR:Q8EGU3
GeneID:1169308 KEGG:son:SO_1498 PATRIC:23522638 OMA:FCNINEA
Uniprot:Q8EGU3
Length = 420
Score = 331 (121.6 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 88/237 (37%), Positives = 132/237 (55%)
Query: 6 GNS-QVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYM 64
G S ++L A+Q E W+QGTADAV Q + R+++ + V++LSGDH+YRMDY
Sbjct: 90 GESVEILPASQRYSE---NWYQGTADAVFQN---IDIIRHELPKYVMVLSGDHVYRMDYA 143
Query: 65 DFVQNHRQSGADITISCLPMDDSRASD-FGLMKINNEGRVLSFSEKPKGKDLKAMAVDTT 123
+ H +SGAD+T+SCL + + A+ FG+M+++++ R+L F EKP+
Sbjct: 144 GLLAAHAESGADMTVSCLEVPVAEAAGAFGVMEVDDDMRILGFEEKPQ------------ 191
Query: 124 VLGLSKQ-EAEEKPYIASMGVYLFKKEILLNLLRWRFPTAN---DFGSEIIPASANEQFL 179
L K + +ASMG Y+F E L L+ A DFG +IIP+ + +
Sbjct: 192 ---LPKHCPGNPEKCLASMGNYVFNTEFLFEQLKKDAQNAESDRDFGKDIIPSIIEKHKV 248
Query: 180 KAYLF-----ND--YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPP 229
AY F N+ YW D+GT+ SF+ AN+ L + P + YDA PI+T + LPP
Sbjct: 249 FAYPFKSAFPNEQAYWRDVGTLDSFWLANMELLSPTPALNLYDAKWPIWTYQEQLPP 305
Score = 54 (24.1 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 305 KIKECIIDKNARIGKNVIIANSEGIQEADRSAEGFYI-RSGVTVILKN 351
KIK IID+ I + +I + + DR A+GF + G+T++ ++
Sbjct: 368 KIKNAIIDRGCIIPEGTVIGYNH---DHDR-AKGFRVSEKGITLVTRD 411
>UNIPROTKB|Q9KLP4 [details] [associations]
symbol:glgC2 "Glucose-1-phosphate adenylyltransferase 2"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0005978 "glycogen biosynthetic process" evidence=ISS]
[GO:0008878 "glucose-1-phosphate adenylyltransferase activity"
evidence=ISS] InterPro:IPR005835 InterPro:IPR005836
InterPro:IPR011004 InterPro:IPR011831 InterPro:IPR023049
Pfam:PF00483 PROSITE:PS00808 PROSITE:PS00809 PROSITE:PS00810
UniPathway:UPA00164 HAMAP:MF_00624 GO:GO:0005524 GO:GO:0005978
EMBL:AE003853 GenomeReviews:AE003853_GR SUPFAM:SSF51161
eggNOG:COG0448 KO:K00975 GO:GO:0008878 TIGRFAMs:TIGR02091
PIR:C82428 RefSeq:NP_233086.1 ProteinModelPortal:Q9KLP4
DNASU:2612101 GeneID:2612101 KEGG:vch:VCA0699 PATRIC:20085946
OMA:SKNHIAP ProtClustDB:PRK00725 Uniprot:Q9KLP4
Length = 407
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 93/309 (30%), Positives = 143/309 (46%)
Query: 21 GKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITIS 80
G +W++GTADA+ WL K V++LSGDH+YRMDY ++ H A +TI+
Sbjct: 93 GGKWYEGTADALFHNMWLLARSDAKY---VVVLSGDHIYRMDYAAMLEEHISKNATLTIA 149
Query: 81 CLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIAS 140
C+ + AS FG+M I+++ R+ F EKP D + + +AS
Sbjct: 150 CMQVPRHEASAFGVMAIDDDSRITCFVEKP---------ADPPCIPNRPDHS-----LAS 195
Query: 141 MGVYLFKKEILLNLLRWRFP---TANDFGSEIIPASANEQFLKAYLF--------ND-YW 188
MG+Y+F ++L L +++DFG ++IP + AY F D YW
Sbjct: 196 MGIYIFNMDVLKKALTEDAEIEQSSHDFGKDVIPKLIATGSVFAYSFCSGKGRVARDCYW 255
Query: 189 EDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHGSFI 248
D+GTI SF++AN+ L P + Y I T + PP S I
Sbjct: 256 RDVGTIDSFYDANMDLLQPVPPMNLYQKNWAIRTYEQQYPPARTVSSATGNEGIFINSII 315
Query: 249 TSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKE 308
+ I S I++NV + D+ ++ V S+L + V +GE K+
Sbjct: 316 ANGVINSGGSVQHSIISSNVRINDSALI----------VDSILFDD---VEVGEGCKLIH 362
Query: 309 CIIDKNARI 317
CIIDK+ +I
Sbjct: 363 CIIDKHVKI 371
>TIGR_CMR|VC_A0699 [details] [associations]
symbol:VC_A0699 "glucose-1-phosphate adenylyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0005978
"glycogen biosynthetic process" evidence=ISS] [GO:0008878
"glucose-1-phosphate adenylyltransferase activity" evidence=ISS]
InterPro:IPR005835 InterPro:IPR005836 InterPro:IPR011004
InterPro:IPR011831 InterPro:IPR023049 Pfam:PF00483 PROSITE:PS00808
PROSITE:PS00809 PROSITE:PS00810 UniPathway:UPA00164 HAMAP:MF_00624
GO:GO:0005524 GO:GO:0005978 EMBL:AE003853 GenomeReviews:AE003853_GR
SUPFAM:SSF51161 eggNOG:COG0448 KO:K00975 GO:GO:0008878
TIGRFAMs:TIGR02091 PIR:C82428 RefSeq:NP_233086.1
ProteinModelPortal:Q9KLP4 DNASU:2612101 GeneID:2612101
KEGG:vch:VCA0699 PATRIC:20085946 OMA:SKNHIAP ProtClustDB:PRK00725
Uniprot:Q9KLP4
Length = 407
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 93/309 (30%), Positives = 143/309 (46%)
Query: 21 GKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITIS 80
G +W++GTADA+ WL K V++LSGDH+YRMDY ++ H A +TI+
Sbjct: 93 GGKWYEGTADALFHNMWLLARSDAKY---VVVLSGDHIYRMDYAAMLEEHISKNATLTIA 149
Query: 81 CLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIAS 140
C+ + AS FG+M I+++ R+ F EKP D + + +AS
Sbjct: 150 CMQVPRHEASAFGVMAIDDDSRITCFVEKP---------ADPPCIPNRPDHS-----LAS 195
Query: 141 MGVYLFKKEILLNLLRWRFP---TANDFGSEIIPASANEQFLKAYLF--------ND-YW 188
MG+Y+F ++L L +++DFG ++IP + AY F D YW
Sbjct: 196 MGIYIFNMDVLKKALTEDAEIEQSSHDFGKDVIPKLIATGSVFAYSFCSGKGRVARDCYW 255
Query: 189 EDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHGSFI 248
D+GTI SF++AN+ L P + Y I T + PP S I
Sbjct: 256 RDVGTIDSFYDANMDLLQPVPPMNLYQKNWAIRTYEQQYPPARTVSSATGNEGIFINSII 315
Query: 249 TSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKE 308
+ I S I++NV + D+ ++ V S+L + V +GE K+
Sbjct: 316 ANGVINSGGSVQHSIISSNVRINDSALI----------VDSILFDD---VEVGEGCKLIH 362
Query: 309 CIIDKNARI 317
CIIDK+ +I
Sbjct: 363 CIIDKHVKI 371
>UNIPROTKB|P0A6V1 [details] [associations]
symbol:glgC "GlgC" species:83333 "Escherichia coli K-12"
[GO:0000287 "magnesium ion binding" evidence=IDA] [GO:0016208 "AMP
binding" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008878 "glucose-1-phosphate adenylyltransferase activity"
evidence=IEA;IDA] [GO:0005978 "glycogen biosynthetic process"
evidence=IEA;IMP] InterPro:IPR005835 InterPro:IPR005836
InterPro:IPR011004 InterPro:IPR011831 InterPro:IPR023049
Pfam:PF00483 PROSITE:PS00808 PROSITE:PS00809 PROSITE:PS00810
UniPathway:UPA00164 HAMAP:MF_00624 GO:GO:0005524 GO:GO:0000287
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0016208 GO:GO:0005978
SUPFAM:SSF51161 EMBL:V00281 EMBL:J01616 eggNOG:COG0448 KO:K00975
GO:GO:0008878 TIGRFAMs:TIGR02091 ProtClustDB:PRK00725 OMA:ACMEVPI
EMBL:M97226 EMBL:S58224 PIR:A00721 RefSeq:NP_417888.1
RefSeq:YP_492003.1 ProteinModelPortal:P0A6V1 SMR:P0A6V1
DIP:DIP-48147N IntAct:P0A6V1 PRIDE:P0A6V1
EnsemblBacteria:EBESCT00000002168 EnsemblBacteria:EBESCT00000002169
EnsemblBacteria:EBESCT00000002170 EnsemblBacteria:EBESCT00000017859
GeneID:12933508 GeneID:947942 KEGG:ecj:Y75_p3747 KEGG:eco:b3430
PATRIC:32122300 EchoBASE:EB0374 EcoGene:EG10379
HOGENOM:HOG000278607 BioCyc:EcoCyc:GLUC1PADENYLTRANS-MONOMER
BioCyc:ECOL316407:JW3393-MONOMER
BioCyc:MetaCyc:GLUC1PADENYLTRANS-MONOMER BRENDA:2.7.7.27
Genevestigator:P0A6V1 Uniprot:P0A6V1
Length = 431
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 98/337 (29%), Positives = 158/337 (46%)
Query: 21 GKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITIS 80
G+ W++GTADAV Q + R K E V+IL+GDH+Y+ DY + +H + GA T++
Sbjct: 110 GENWYRGTADAVTQNLDIIR--RYKA-EYVVILAGDHIYKQDYSRMLIDHVEKGARCTVA 166
Query: 81 CLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIAS 140
C+P+ AS FG+M ++ +++ F EKP +M D SK +AS
Sbjct: 167 CMPVPIEEASAFGVMAVDENDKIIEFVEKPANPP--SMPNDP-----SKS-------LAS 212
Query: 141 MGVYLFKKEILLNLLRWRFPTAN---DFGSEIIPASANEQFLKAYLF------ND----- 186
MG+Y+F + L LL N DFG ++IP A+ F +D
Sbjct: 213 MGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEP 272
Query: 187 YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHGS 246
YW D+GT+ ++++ANL L + P YD PI T +LPP S
Sbjct: 273 YWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRTYNESLPPAKFVQDRSGSHGMTLNS 332
Query: 247 FITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKI 306
++ + V ++S + + V + F D+ V LL E V +G + ++
Sbjct: 333 LVSGGCVISGSVVVQSVLFSRVRVNS-------FCNIDSAV--LLPE----VWVGRSCRL 379
Query: 307 KECIIDKNARIGKNVIIANS--EGIQEADRSAEGFYI 341
+ C+ID+ I + ++I + E + RS EG +
Sbjct: 380 RRCVIDRACVIPEGMVIGENAEEDARRFYRSEEGIVL 416
>UNIPROTKB|Q9KRB5 [details] [associations]
symbol:glgC1 "Glucose-1-phosphate adenylyltransferase 1"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0005978 "glycogen biosynthetic process" evidence=ISS]
[GO:0008878 "glucose-1-phosphate adenylyltransferase activity"
evidence=ISS] InterPro:IPR005835 InterPro:IPR005836
InterPro:IPR011004 InterPro:IPR011831 InterPro:IPR023049
Pfam:PF00483 PROSITE:PS00808 PROSITE:PS00809 PROSITE:PS00810
UniPathway:UPA00164 HAMAP:MF_00624 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005978 SUPFAM:SSF51161 PIR:G82165
RefSeq:NP_231363.1 ProteinModelPortal:Q9KRB5 DNASU:2613732
GeneID:2613732 KEGG:vch:VC1727 PATRIC:20082514 eggNOG:COG0448
KO:K00975 OMA:PAKFVHE ProtClustDB:PRK00844 GO:GO:0008878
TIGRFAMs:TIGR02091 Uniprot:Q9KRB5
Length = 405
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 101/322 (31%), Positives = 151/322 (46%)
Query: 21 GKRWFQGTADAVRQFHWLFEDPRNKVIED-VLILSGDHLYRMDYMDFVQNHRQSGADITI 79
GKRW++GTADA+ Q + F + V D V I DH+Y+MD + HR+ A++T+
Sbjct: 92 GKRWYEGTADAIYQ-NLRFVEI---VAPDQVCIFGSDHIYKMDIRQMLDFHRRMEAELTV 147
Query: 80 SCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIA 139
S L M S+AS FG+++++ G+++ F EKP ++ G E + +
Sbjct: 148 SALRMPISQASQFGVIEVDENGKMVGFEEKPSNPK--------SIPG------EPEWALV 193
Query: 140 SMGVYLFKKEILLNLLRW---RFPTANDFGSEIIPASANEQFLKAYLF----------ND 186
SMG Y+F+ E L LR +++DFG +IIP + Y F +
Sbjct: 194 SMGNYIFEAETLSKELREDAENNQSSHDFGKDIIPKMFPRGKVYVYDFTTNKIKGEKEST 253
Query: 187 YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXX-----XXXX 241
YW D+GTI S++ A++ L P FS Y+ + P++T LPP
Sbjct: 254 YWRDVGTIESYWSAHMDLLDKDPEFSLYNRSWPLHTYYPPLPPATFVDVKDKKVKITDSL 313
Query: 242 XXHGSFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIG 301
GS+I S I SV+G RS I A + ++++LG D V IG
Sbjct: 314 ISGGSYIQGSTIYKSVLGFRSNIAAGSFISESVILG------D-------------VKIG 354
Query: 302 ENTKIKECIIDKNARIGKNVII 323
IK IIDK+ I II
Sbjct: 355 AGCTIKRAIIDKDVEIAAGTII 376
>TIGR_CMR|VC_1727 [details] [associations]
symbol:VC_1727 "glucose-1-phosphate adenylyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0005978
"glycogen biosynthetic process" evidence=ISS] [GO:0008878
"glucose-1-phosphate adenylyltransferase activity" evidence=ISS]
InterPro:IPR005835 InterPro:IPR005836 InterPro:IPR011004
InterPro:IPR011831 InterPro:IPR023049 Pfam:PF00483 PROSITE:PS00808
PROSITE:PS00809 PROSITE:PS00810 UniPathway:UPA00164 HAMAP:MF_00624
GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005978
SUPFAM:SSF51161 PIR:G82165 RefSeq:NP_231363.1
ProteinModelPortal:Q9KRB5 DNASU:2613732 GeneID:2613732
KEGG:vch:VC1727 PATRIC:20082514 eggNOG:COG0448 KO:K00975
OMA:PAKFVHE ProtClustDB:PRK00844 GO:GO:0008878 TIGRFAMs:TIGR02091
Uniprot:Q9KRB5
Length = 405
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 101/322 (31%), Positives = 151/322 (46%)
Query: 21 GKRWFQGTADAVRQFHWLFEDPRNKVIED-VLILSGDHLYRMDYMDFVQNHRQSGADITI 79
GKRW++GTADA+ Q + F + V D V I DH+Y+MD + HR+ A++T+
Sbjct: 92 GKRWYEGTADAIYQ-NLRFVEI---VAPDQVCIFGSDHIYKMDIRQMLDFHRRMEAELTV 147
Query: 80 SCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIA 139
S L M S+AS FG+++++ G+++ F EKP ++ G E + +
Sbjct: 148 SALRMPISQASQFGVIEVDENGKMVGFEEKPSNPK--------SIPG------EPEWALV 193
Query: 140 SMGVYLFKKEILLNLLRW---RFPTANDFGSEIIPASANEQFLKAYLF----------ND 186
SMG Y+F+ E L LR +++DFG +IIP + Y F +
Sbjct: 194 SMGNYIFEAETLSKELREDAENNQSSHDFGKDIIPKMFPRGKVYVYDFTTNKIKGEKEST 253
Query: 187 YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXX-----XXXX 241
YW D+GTI S++ A++ L P FS Y+ + P++T LPP
Sbjct: 254 YWRDVGTIESYWSAHMDLLDKDPEFSLYNRSWPLHTYYPPLPPATFVDVKDKKVKITDSL 313
Query: 242 XXHGSFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIG 301
GS+I S I SV+G RS I A + ++++LG D V IG
Sbjct: 314 ISGGSYIQGSTIYKSVLGFRSNIAAGSFISESVILG------D-------------VKIG 354
Query: 302 ENTKIKECIIDKNARIGKNVII 323
IK IIDK+ I II
Sbjct: 355 AGCTIKRAIIDKDVEIAAGTII 376
>UNIPROTKB|P64241 [details] [associations]
symbol:glgC "Glucose-1-phosphate adenylyltransferase"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0009250 "glucan biosynthetic process"
evidence=IMP] InterPro:IPR005835 InterPro:IPR005836
InterPro:IPR011004 InterPro:IPR011831 InterPro:IPR023049
Pfam:PF00483 PROSITE:PS00808 PROSITE:PS00809 PROSITE:PS00810
UniPathway:UPA00164 UniPathway:UPA00934 HAMAP:MF_00624
GO:GO:0005829 GO:GO:0005524 EMBL:BX842575 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0005978
GO:GO:0045227 SUPFAM:SSF51161 GO:GO:0009250 eggNOG:COG0448
KO:K00975 OMA:PAKFVHE ProtClustDB:PRK00844 GO:GO:0008878
TIGRFAMs:TIGR02091 HOGENOM:HOG000278607 PIR:C70610
RefSeq:NP_215729.1 RefSeq:NP_335694.1 RefSeq:YP_006514588.1
ProteinModelPortal:P64241 SMR:P64241 PRIDE:P64241
EnsemblBacteria:EBMYCT00000001865 EnsemblBacteria:EBMYCT00000072594
GeneID:13319792 GeneID:887933 GeneID:924802 KEGG:mtc:MT1251
KEGG:mtu:Rv1213 KEGG:mtv:RVBD_1213 PATRIC:18124518
TubercuList:Rv1213 Uniprot:P64241
Length = 404
Score = 254 (94.5 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 80/309 (25%), Positives = 142/309 (45%)
Query: 14 TQTPGEA--GKRWFQGTADAVRQ-FHWLF-EDPRNKVIEDVLILSGDHLYRMDYMDFVQN 69
T P + G RW+ G+ADA+ Q + ++ EDP + +++ DH+YRMD V+
Sbjct: 86 TPVPAQQRLGPRWYTGSADAIYQSLNLIYDEDP-----DYIVVFGADHVYRMDPEQMVRF 140
Query: 70 HRQSGADITISCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSK 129
H SGA T++ + + A+ FG + ++ GR+ SF EKP DTT +
Sbjct: 141 HIDSGAGATVAGIRVPRENATAFGCIDADDSGRIRSFVEKPLEPPGTPDDPDTTFV---- 196
Query: 130 QEAEEKPYIASMGVYLFKKEILLNLLRWRFP---TANDFGSEIIPASANEQFLKAYLFND 186
SMG Y+F ++L++ +R + +D G +I+P + Y F+D
Sbjct: 197 ----------SMGNYIFTTKVLIDAIRADADDDHSDHDMGGDIVPRLVADGMAAVYDFSD 246
Query: 187 ------------YWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXX 234
YW D+GT+ +F++A++ L + P+F+ Y+ PI NL P
Sbjct: 247 NEVPGATDRDRAYWRDVGTLDAFYDAHMDLVSVHPVFNLYNKRWPIRGESENLAPAKFVN 306
Query: 235 XXXXXXXXXH-GSFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAE 293
GS I+++ + +SV+ ++ ++ ++++ A V + +
Sbjct: 307 GGSAQESVVGAGSIISAASVRNSVLSSNVVVDDGAIVEGSVIMPGTRVGRGAVVRHAILD 366
Query: 294 GRVPVGIGE 302
V VG GE
Sbjct: 367 KNVVVGPGE 375
>TIGR_CMR|BA_5122 [details] [associations]
symbol:BA_5122 "glucose-1-phosphate adenylyltransferase"
species:198094 "Bacillus anthracis str. Ames" [GO:0005978 "glycogen
biosynthetic process" evidence=ISS] [GO:0008878
"glucose-1-phosphate adenylyltransferase activity" evidence=ISS]
InterPro:IPR005835 InterPro:IPR005836 InterPro:IPR011004
InterPro:IPR011831 InterPro:IPR023049 Pfam:PF00483 PROSITE:PS00808
PROSITE:PS00809 PROSITE:PS00810 UniPathway:UPA00164 HAMAP:MF_00624
GO:GO:0005524 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0005978 SUPFAM:SSF51161
eggNOG:COG0448 KO:K00975 GO:GO:0008878 TIGRFAMs:TIGR02091
RefSeq:NP_847308.1 RefSeq:YP_021775.1 RefSeq:YP_031004.1
ProteinModelPortal:Q81K83 IntAct:Q81K83 DNASU:1084437
EnsemblBacteria:EBBACT00000008623 EnsemblBacteria:EBBACT00000014574
EnsemblBacteria:EBBACT00000022476 GeneID:1084437 GeneID:2819783
GeneID:2849401 KEGG:ban:BA_5122 KEGG:bar:GBAA_5122 KEGG:bat:BAS4760
HOGENOM:HOG000278603 OMA:ACMEVPI ProtClustDB:PRK05293
BioCyc:BANT260799:GJAJ-4814-MONOMER
BioCyc:BANT261594:GJ7F-4974-MONOMER Uniprot:Q81K83
Length = 376
Score = 180 (68.4 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 56/185 (30%), Positives = 86/185 (46%)
Query: 84 MDDSRASDFGLMKINNEGRV-LSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPY----- 137
MD S+ D+ + K E V +S E P + + T + E EEKP
Sbjct: 134 MDYSKMLDYHIEK---EADVSISVIEVP-WDEASRFGIMNTNEEMEIVEFEEKPQFPRSN 189
Query: 138 IASMGVYLFKKEILLNLLRW--RFP-TANDFGSEIIPASANE-QFLKAYLFNDYWEDIGT 193
+ASMG+Y+F IL L R P ++NDFG +++P +E + L AY F YW+D+GT
Sbjct: 190 LASMGIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEGYWKDVGT 249
Query: 194 IRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPPXXXXXXXXXXXXXXHGSFITSSFI 253
++S +EAN+ L + D IY+ N PP + + +
Sbjct: 250 VKSLWEANMDLLRDETSLNLNDRDWRIYSVNPNEPPQYIAEKAKVEESLINEGCVIEGDV 309
Query: 254 EHSVV 258
+HSV+
Sbjct: 310 KHSVL 314
Score = 177 (67.4 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 38/94 (40%), Positives = 58/94 (61%)
Query: 20 AGKRWFQGTADAVRQ-FHWLFE-DPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADI 77
+G +W+ GTA A+ Q ++L + +P E VLILSGDH+Y+MDY + H + AD+
Sbjct: 96 SGVKWYTGTASAIYQNLNYLSQYEP-----EYVLILSGDHIYKMDYSKMLDYHIEKEADV 150
Query: 78 TISCLPMDDSRASDFGLMKINNEGRVLSFSEKPK 111
+IS + + AS FG+M N E ++ F EKP+
Sbjct: 151 SISVIEVPWDEASRFGIMNTNEEMEIVEFEEKPQ 184
Score = 51 (23.0 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 289 SLLAEGRVPVGIGENTKIKECIIDKNARIGKNVII 323
S+L +G V + E + + + ++ A+IGKNV+I
Sbjct: 312 SVLFQG---VTVEEGSMVIDSVVMPGAKIGKNVVI 343
>TIGR_CMR|CHY_0976 [details] [associations]
symbol:CHY_0976 "glucose-1-phosphate
thymidylyltransferase" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0000271 "polysaccharide biosynthetic
process" evidence=ISS] [GO:0008879 "glucose-1-phosphate
thymidylyltransferase activity" evidence=ISS] InterPro:IPR005835
Pfam:PF00483 GO:GO:0009058 EMBL:CP000141 GenomeReviews:CP000141_GR
KO:K00973 GO:GO:0008879 eggNOG:COG1209 RefSeq:YP_359823.1
ProteinModelPortal:Q3ADG1 STRING:Q3ADG1 GeneID:3727376
KEGG:chy:CHY_0976 PATRIC:21275085 HOGENOM:HOG000283475 OMA:TDMLEVN
ProtClustDB:CLSK941261 BioCyc:CHYD246194:GJCN-975-MONOMER
InterPro:IPR005908 TIGRFAMs:TIGR01208 Uniprot:Q3ADG1
Length = 354
Score = 78 (32.5 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 271 KDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKECIIDKNARIGKNVIIANS 326
+ T + G E AE+ + + G P IG+NTK+K I IG N ++ NS
Sbjct: 249 EQTKINGRVVIEGGAEIENSIIRG--PAVIGKNTKVKNSFIGSYTSIGNNCLVENS 302
Score = 72 (30.4 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 48 EDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKINNEGRVLSFS 107
+D ++ GD+L +FV+ ++++ D TI + D + FG+ ++ +V
Sbjct: 99 DDFIMYLGDNLINSGIKEFVEEYKENRYDATILLKEVQDP--TRFGVAVVDENFKVQRLI 156
Query: 108 EKPK 111
EKPK
Sbjct: 157 EKPK 160
Score = 55 (24.4 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 21/78 (26%), Positives = 34/78 (43%)
Query: 130 QEAEEKPY-IASMGVYLFKKEILLNLLR----WRFPTA-NDFGSEIIPASANEQFLKAYL 183
++ +E P +A +G+Y+F +I + R WR D E+I +KA+
Sbjct: 157 EKPKEPPSNLALVGIYIFSPKIFSAIDRIKPSWRGELEITDAIQELINQGG---MVKAHK 213
Query: 184 FNDYWEDIGTIRSFFEAN 201
+W D G EAN
Sbjct: 214 ITGWWLDTGKKDDLLEAN 231
>DICTYBASE|DDB_G0287619 [details] [associations]
symbol:gmppB "mannose-1-phosphate guanylyltransferase
beta" species:44689 "Dictyostelium discoideum" [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0004475
"mannose-1-phosphate guanylyltransferase activity"
evidence=IEA;ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0009298 "GDP-mannose biosynthetic process" evidence=IEA;ISS]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR005835 Pfam:PF00483 PROSITE:PS00101
UniPathway:UPA00126 dictyBase:DDB_G0287619 Pfam:PF00132
GO:GO:0005525 GenomeReviews:CM000154_GR EMBL:AAFI02000103
GO:GO:0009298 InterPro:IPR001451 eggNOG:COG1208 KO:K00966
GO:GO:0004475 RefSeq:XP_637125.1 ProteinModelPortal:Q54K39
STRING:Q54K39 PRIDE:Q54K39 EnsemblProtists:DDB0231665
GeneID:8626220 KEGG:ddi:DDB_G0287619 OMA:GRWVRIE
ProtClustDB:CLSZ2497141 Uniprot:Q54K39
Length = 359
Score = 70 (29.7 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 48 EDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKINNE-GRVLSF 106
E +L+ D + + D + H+ G + TI +++ S +G++ E G++L F
Sbjct: 101 EPFFVLNSDIICDFPFADLLAFHKSHGGEGTIMVTKVEEP--SKYGVVVYKEENGQILKF 158
Query: 107 SEKPK 111
EKP+
Sbjct: 159 VEKPQ 163
Score = 67 (28.6 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 300 IGENTKIKECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTVILKNSVIT 355
IG+N+ IK II N+ IGK V + N+ + E ++ YI G IL + IT
Sbjct: 296 IGKNSWIKSTIIGWNSSIGKWVRMENTSVLGEDVHVSDELYINGGK--ILPHKSIT 349
Score = 67 (28.6 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 21/69 (30%), Positives = 29/69 (42%)
Query: 134 EKP--YIASM---GVYLFKKEILLNLLRWRFPTANDFGSEIIPASANEQFLKAYLFNDYW 188
EKP Y+ + GVY+F IL + P EI PA A + L +W
Sbjct: 160 EKPQVYVGNKINAGVYIFNPTILDRIQ----PKPTSIEKEIFPAMAADSQLYCMQLEGFW 215
Query: 189 EDIGTIRSF 197
D+G + F
Sbjct: 216 MDVGQPKDF 224
Score = 56 (24.8 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 250 SSFIEHSVVGIRSRINANVHLKDTMMLGADFYETD 284
+S+I+ +++G S I V +++T +LG D + +D
Sbjct: 299 NSWIKSTIIGWNSSIGKWVRMENTSVLGEDVHVSD 333
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 360 346 0.00098 116 3 11 22 0.38 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 603 (64 KB)
Total size of DFA: 222 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.57u 0.10s 25.67t Elapsed: 00:00:02
Total cpu time: 25.58u 0.10s 25.68t Elapsed: 00:00:02
Start: Tue May 21 05:30:01 2013 End: Tue May 21 05:30:03 2013