Query 018111
Match_columns 360
No_of_seqs 114 out of 1343
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 06:14:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018111.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018111hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0708 XthA Exonuclease III [ 100.0 1.6E-46 3.5E-51 341.5 23.4 251 42-345 1-261 (261)
2 PRK13911 exodeoxyribonuclease 100.0 8.2E-41 1.8E-45 308.6 26.3 242 42-343 1-249 (250)
3 PRK11756 exonuclease III; Prov 100.0 1.8E-37 4E-42 290.1 26.2 259 42-345 1-268 (268)
4 TIGR00195 exoDNase_III exodeox 100.0 1.8E-34 3.9E-39 267.7 26.3 247 42-343 1-254 (254)
5 TIGR00633 xth exodeoxyribonucl 100.0 2E-32 4.2E-37 253.4 26.2 248 42-344 1-255 (255)
6 PRK05421 hypothetical protein; 99.9 2.6E-22 5.6E-27 187.2 18.7 211 39-346 41-262 (263)
7 COG3568 ElsH Metal-dependent h 99.9 1.5E-21 3.4E-26 177.7 15.0 233 42-346 10-258 (259)
8 TIGR03395 sphingomy sphingomye 99.8 2.2E-18 4.8E-23 162.2 18.1 157 42-222 1-192 (283)
9 PRK15251 cytolethal distending 99.8 2.2E-17 4.7E-22 151.7 20.9 171 38-223 21-200 (271)
10 PTZ00297 pantothenate kinase; 99.8 1.2E-17 2.6E-22 184.6 21.6 262 40-348 9-317 (1452)
11 PLN03144 Carbon catabolite rep 99.8 1.1E-17 2.3E-22 169.9 19.3 156 38-223 251-471 (606)
12 KOG3873 Sphingomyelinase famil 99.8 4.2E-19 9.1E-24 165.1 8.3 253 38-353 5-300 (422)
13 PF03372 Exo_endo_phos: Endonu 99.7 5.8E-17 1.2E-21 146.4 12.8 151 45-223 1-172 (249)
14 KOG1294 Apurinic/apyrimidinic 99.7 1.4E-16 2.9E-21 151.2 15.1 259 39-345 61-335 (335)
15 KOG2756 Predicted Mg2+-depende 99.7 1.3E-15 2.8E-20 136.8 12.6 247 26-344 84-348 (349)
16 smart00476 DNaseIc deoxyribonu 99.6 2.2E-14 4.7E-19 133.8 17.7 151 40-221 16-190 (276)
17 COG3021 Uncharacterized protei 99.6 1.3E-14 2.7E-19 134.8 10.2 147 38-222 85-237 (309)
18 KOG2338 Transcriptional effect 99.5 2.1E-13 4.5E-18 132.7 17.0 154 40-223 115-308 (495)
19 PF14529 Exo_endo_phos_2: Endo 99.3 2.6E-11 5.7E-16 98.6 9.3 119 169-340 1-119 (119)
20 COG5239 CCR4 mRNA deadenylase, 99.1 3.3E-09 7.1E-14 99.8 14.8 44 41-84 30-86 (378)
21 smart00128 IPPc Inositol polyp 99.0 4.4E-08 9.5E-13 93.6 17.9 162 41-222 4-196 (310)
22 COG2374 Predicted extracellula 98.8 7.9E-08 1.7E-12 98.1 15.2 250 36-349 458-792 (798)
23 KOG0620 Glucose-repressible al 98.7 5.9E-08 1.3E-12 93.9 9.6 40 41-80 19-72 (361)
24 KOG0566 Inositol-1,4,5-triphos 98.0 5E-05 1.1E-09 79.5 12.3 158 41-220 538-727 (1080)
25 PLN03191 Type I inositol-1,4,5 96.0 0.058 1.2E-06 55.3 10.6 37 41-80 109-148 (621)
26 COG5411 Phosphatidylinositol 5 95.8 0.013 2.9E-07 57.3 5.1 49 168-221 166-220 (460)
27 PTZ00312 inositol-1,4,5-tripho 88.1 1.3 2.7E-05 41.7 5.9 55 168-222 81-143 (356)
28 PLN03191 Type I inositol-1,4,5 66.0 5.9 0.00013 41.0 3.4 48 300-355 554-603 (621)
29 KOG1294 Apurinic/apyrimidinic 54.5 69 0.0015 31.0 8.3 58 157-222 11-70 (335)
30 KOG1976 Inositol polyphosphate 49.4 33 0.00072 32.6 5.0 58 167-224 169-234 (391)
31 PLN02798 nitrilase 20.8 98 0.0021 28.8 3.2 19 63-81 34-52 (286)
32 PF09949 DUF2183: Uncharacteri 20.1 1.2E+02 0.0026 23.8 3.0 20 196-215 53-72 (100)
No 1
>COG0708 XthA Exonuclease III [DNA replication, recombination, and repair]
Probab=100.00 E-value=1.6e-46 Score=341.52 Aligned_cols=251 Identities=31% Similarity=0.561 Sum_probs=210.9
Q ss_pred eEEEEEeCccchhhhcCCchhHHHHHhhcCCCEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCCCCCC
Q 018111 42 LKFVTWNANSLLLRVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSSPPFK 121 (360)
Q Consensus 42 lrI~s~Ni~g~~~~~~~~~~~l~~~i~~~~pDIi~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 121 (360)
|||+||||||++...+ .+.+++.+.+|||||||||+.....+|... +.. .
T Consensus 1 mkI~SwNVNgiRar~~----~~~~~l~~~~pDVlclQEtK~~~~~fp~~~--------------------~~~------~ 50 (261)
T COG0708 1 MKIASWNVNGLRARLK----KLLDWLEEEQPDVLCLQETKAQDEQFPREE--------------------LEA------L 50 (261)
T ss_pred CeeEEEehhhHHHHHH----HHHHHHHHhCCCEEEEEecccCcccCCHhH--------------------Hhh------C
Confidence 7999999999999884 599999999999999999999887665210 111 6
Q ss_pred CceEEEecCCCCceeEEEEEeecCCCceeeccCC-----CCcccEEEEEcCcEEEEEEEcCCCCC-ccchhhHHHHHHHH
Q 018111 122 NYQIWWSLADSKYAGTALLVKKCFQPKKVSFSLE-----KTDGRVILAEFETFYLLNTYAPNNGW-KEEENSFQRRRKWD 195 (360)
Q Consensus 122 gy~~~~~~~~~~~~Gvailsr~pi~~~~v~~~~~-----~~~~r~l~v~~~~l~v~nvh~~~~~~-~~~~~~~~~r~~~l 195 (360)
||+.++..+..|++||||+||.+.. .+...++ +.++|++.+.++.+.|+|+|+|++.. +.+ ++..|.+|+
T Consensus 51 GY~~~~~~gqKgysGVailsr~~~~--~v~~g~~~~~~~d~e~R~I~a~~~~~~v~~~Y~PnG~~~~~~--k~~yKl~f~ 126 (261)
T COG0708 51 GYHHVFNHGQKGYSGVAILSKKPPD--DVRRGFPGEEEDDEEGRVIEAEFDGFRVINLYFPNGSSIGLE--KFDYKLRFL 126 (261)
T ss_pred CceEEEecCcCCcceEEEEEccCch--hhhcCCCCCccccccCcEEEEEECCEEEEEEEcCCCCCCCCc--chHHHHHHH
Confidence 9976666677889999999998753 4444443 25799999999999999999999998 444 578899999
Q ss_pred HHHHHHHHhc--CCCCEEEEccccccCccccCcCh-hhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHHHhhhhcCCeeee
Q 018111 196 KRIQEFVLQC--SGKPLIWCGDLNVSHEEIDVSHP-EFFAAAKLNGYVPPNKEDWGQPGFTIAERKRFGAILKEGRLIDA 272 (360)
Q Consensus 196 ~~l~~~l~~~--~~~p~Il~GDFN~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~D~ 272 (360)
+.+..++.+. .+.|+|||||||..|.+.|.++| +.|. +.+..+|.+.+|+|+..+++.| |+|+
T Consensus 127 ~~l~~~l~~l~~~~~~~vl~GD~NIap~~iDv~~~~~~~~-------------n~~~~~f~~eeR~~~~~ll~~G-~~D~ 192 (261)
T COG0708 127 DALRNYLEELLKKGKPVVLCGDFNIAPEEIDVANPKKRWL-------------NEGNSGFLPEERAWFRRLLNAG-FVDT 192 (261)
T ss_pred HHHHHHHHHHhhcCCCEEEecccccCCchhcccCchhhhh-------------cCCCCCCCHHHHHHHHHHHHcc-hhhh
Confidence 9999999764 56999999999999999999988 5553 4578999999999999999988 9999
Q ss_pred eeccccCCCCCcceeccCCCCCccc-CccceeEEEEeChhhhhhheeeEeccCccccCCCCCCCccceEEeeec
Q 018111 273 YRFLHKEKDMDCGFSWSGNPIGKYR-GKRMRIDYFIVSEELKDRIIACEMQGHGIELEGFYGSDHCPVSLELSE 345 (360)
Q Consensus 273 ~r~~~~~~~~~~~~T~~~~~~~~~~-~~~~rID~I~~s~~l~~~v~~~~i~~~~~~~~~~~~SDH~PV~v~l~~ 345 (360)
+|.++|+.. .||||+++...|+ +.|+|||||++|+.++.+++++.|.... .+...+|||+||+++|++
T Consensus 193 ~R~~~p~~~---~YTwW~YR~~~~~~n~G~RID~~l~S~~L~~~~~~a~I~~~~--rg~e~pSDHaPV~~e~~~ 261 (261)
T COG0708 193 FRLFHPEPE---KYTWWDYRANAARRNRGWRIDYILVSPALADRLKDAGIDREV--RGWEKPSDHAPVWVELDL 261 (261)
T ss_pred hHhhCCCCC---cccccccccchhhhcCceeEEEEEeCHHHHHHHHhcCccHHH--hcCCCCCCcCcEEEEecC
Confidence 999999874 5999998887663 5799999999999999999999998632 113467999999999974
No 2
>PRK13911 exodeoxyribonuclease III; Provisional
Probab=100.00 E-value=8.2e-41 Score=308.60 Aligned_cols=242 Identities=36% Similarity=0.700 Sum_probs=196.3
Q ss_pred eEEEEEeCccchhhhcCCchhHHHHHhhcCCCEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCCCCCC
Q 018111 42 LKFVTWNANSLLLRVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSSPPFK 121 (360)
Q Consensus 42 lrI~s~Ni~g~~~~~~~~~~~l~~~i~~~~pDIi~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 121 (360)
|||+||||+|++...++ .+.++|.+++|||||||||+.....+. + ...
T Consensus 1 mki~swNVNgir~~~~~---~~~~~l~~~~~DIiclQEtK~~~~~~~--------------------------~---~~~ 48 (250)
T PRK13911 1 MKLISWNVNGLRACMTK---GFMDFFNSVDADVFCIQESKMQQEQNT--------------------------F---EFK 48 (250)
T ss_pred CEEEEEEeCChhHhhhh---hHHHHHHhcCCCEEEEEeecccccccc--------------------------c---ccC
Confidence 79999999999987743 699999999999999999998764221 0 126
Q ss_pred CceEEEec-CCCCceeEEEEEeecCCCceeeccCC----CCcccEEEEEcCcEEEEEEEcCCCCCccchhhHHHHHHHHH
Q 018111 122 NYQIWWSL-ADSKYAGTALLVKKCFQPKKVSFSLE----KTDGRVILAEFETFYLLNTYAPNNGWKEEENSFQRRRKWDK 196 (360)
Q Consensus 122 gy~~~~~~-~~~~~~Gvailsr~pi~~~~v~~~~~----~~~~r~l~v~~~~l~v~nvh~~~~~~~~~~~~~~~r~~~l~ 196 (360)
||+.++.. ...+++||||++|.+ |..+.+.++ +.+||++.++++.+.|+|+|+|+++...+ ++.+|.+|+.
T Consensus 49 gY~~~~~~~~~kgy~GVAi~~k~~--~~~v~~~~~~~~~d~eGR~I~~~~~~~~l~nvY~Pn~~~~~~--r~~~K~~~~~ 124 (250)
T PRK13911 49 GYFDFWNCAIKKGYSGVVTFTKKE--PLSVSYGINIEEHDKEGRVITCEFESFYLVNVYTPNSQQALS--RLSYRMSWEV 124 (250)
T ss_pred CceEEEEecccCccceEEEEEcCC--chheEEcCCCCcccccCCEEEEEECCEEEEEEEecCCCCCCc--chHHHHHHHH
Confidence 99876643 345689999999986 344444432 26799999999999999999999986655 5667889999
Q ss_pred HHHHHHHhc-CCCCEEEEccccccCccccCcChhhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHHHhhhhcCCeeeeeec
Q 018111 197 RIQEFVLQC-SGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIAERKRFGAILKEGRLIDAYRF 275 (360)
Q Consensus 197 ~l~~~l~~~-~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~D~~r~ 275 (360)
.+.+++.+. .+.++|+|||||..+.+.|..+++. .....++++.+++++..+++.| |+|+||.
T Consensus 125 ~~~~~l~~l~~~~~~Ii~GD~Nva~~~~D~~~~~~---------------~~~~~gf~~~er~~f~~~l~~g-l~D~~R~ 188 (250)
T PRK13911 125 EFKKFLKALELKKPVIVCGDLNVAHNEIDLENPKT---------------NRKNAGFSDEERGKFSELLNAG-FIDTFRY 188 (250)
T ss_pred HHHHHHHhcccCCCEEEEccccCCCChhhccChhh---------------cCCCCCcCHHHHHHHHHHHhcC-Ceehhhh
Confidence 999999764 4579999999999999999987753 2356789999999999999975 9999999
Q ss_pred cccCCCCCcceeccCCCCCc-ccCccceeEEEEeChhhhhhheeeEeccCccccCCCCCCCccceEEee
Q 018111 276 LHKEKDMDCGFSWSGNPIGK-YRGKRMRIDYFIVSEELKDRIIACEMQGHGIELEGFYGSDHCPVSLEL 343 (360)
Q Consensus 276 ~~~~~~~~~~~T~~~~~~~~-~~~~~~rID~I~~s~~l~~~v~~~~i~~~~~~~~~~~~SDH~PV~v~l 343 (360)
++|... ..||||++.... ..+.+.||||||+|+++...+..+.+... ..+|||+||.++|
T Consensus 189 ~~p~~~--~~yTww~~~~~~~~~n~g~RIDyilvs~~~~~~~~~~~i~~~------~~~SDH~Pv~~~~ 249 (250)
T PRK13911 189 FYPNKE--KAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKD------ILGSDHCPVGLEL 249 (250)
T ss_pred hCCCCC--CCCccCCCcCCccccCCcceEEEEEEChHHhhhEEEEEECCC------CCCCCcccEEEEe
Confidence 999853 579999865443 34678999999999999988888888652 4689999999987
No 3
>PRK11756 exonuclease III; Provisional
Probab=100.00 E-value=1.8e-37 Score=290.05 Aligned_cols=259 Identities=24% Similarity=0.390 Sum_probs=186.8
Q ss_pred eEEEEEeCccchhhhcCCchhHHHHHhhcCCCEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCCCCCC
Q 018111 42 LKFVTWNANSLLLRVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSSPPFK 121 (360)
Q Consensus 42 lrI~s~Ni~g~~~~~~~~~~~l~~~i~~~~pDIi~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 121 (360)
|||+||||+|++... ..+.++|++.+|||||||||+.....++. .+++. .
T Consensus 1 mri~T~Nv~g~~~~~----~~i~~~i~~~~pDIi~LQE~~~~~~~~~~--------------------~~~~~------~ 50 (268)
T PRK11756 1 MKFVSFNINGLRARP----HQLEAIIEKHQPDVIGLQETKVHDEMFPL--------------------EEVEA------L 50 (268)
T ss_pred CEEEEEEcCCHHHHH----HHHHHHHHhcCCCEEEEEecccccccCCH--------------------HHHHh------c
Confidence 799999999986654 57999999999999999999765432210 01112 5
Q ss_pred CceEEEecCCCCceeEEEEEeecCCCceeeccCC--CCcccEEEEEcC----cEEEEEEEcCCCCCccchhhHHHHHHHH
Q 018111 122 NYQIWWSLADSKYAGTALLVKKCFQPKKVSFSLE--KTDGRVILAEFE----TFYLLNTYAPNNGWKEEENSFQRRRKWD 195 (360)
Q Consensus 122 gy~~~~~~~~~~~~Gvailsr~pi~~~~v~~~~~--~~~~r~l~v~~~----~l~v~nvh~~~~~~~~~~~~~~~r~~~l 195 (360)
||+.++. +..+++|+||+||.|+......+... ...++++.+.+. .+.|+|+|+|++....+...+..|.+++
T Consensus 51 gy~~~~~-~~~~~~GvailSr~p~~~~~~~~~~~~~~~~~r~l~~~i~~~~g~~~v~n~y~P~~~~~~~~~~~~~r~~~~ 129 (268)
T PRK11756 51 GYHVFYH-GQKGHYGVALLSKQTPIAVRKGFPTDDEEAQRRIIMATIPTPNGNLTVINGYFPQGESRDHPTKFPAKRQFY 129 (268)
T ss_pred CCEEEEe-CCCCCCEEEEEECCChHHeEECCCCccccccCCEEEEEEEcCCCCEEEEEEEecCCCCCCcchhHHHHHHHH
Confidence 8876654 45568899999999864222222111 135778887763 5999999999876543323444577888
Q ss_pred HHHHHHHHhc--CCCCEEEEccccccCccccCcChhhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHHHhhhhcCCeeeee
Q 018111 196 KRIQEFVLQC--SGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIAERKRFGAILKEGRLIDAY 273 (360)
Q Consensus 196 ~~l~~~l~~~--~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~D~~ 273 (360)
+.|..++.+. .+.|+|||||||..+.+.|...++.....+ ...+..++++.+++++..++..+ |+|+|
T Consensus 130 ~~l~~~l~~~~~~~~pvIl~GDfN~~~~~~D~~~~~~~~~~~---------~~~~~~~~~~~er~~~~~l~~~~-l~D~~ 199 (268)
T PRK11756 130 QDLQNYLETELSPDNPLLIMGDMNISPTDLDIGIGEENRKRW---------LRTGKCSFLPEEREWLDRLMDWG-LVDTF 199 (268)
T ss_pred HHHHHHHHHHhccCCCEEEEeecccCCChhhcCCcccChHHh---------cccCCccCCHHHHHHHHHHHhCC-cEeeh
Confidence 8888888653 567999999999999988775432100000 01245678899999999888755 99999
Q ss_pred eccccCCCCCcceeccCCCCCcc-cCccceeEEEEeChhhhhhheeeEeccCccccCCCCCCCccceEEeeec
Q 018111 274 RFLHKEKDMDCGFSWSGNPIGKY-RGKRMRIDYFIVSEELKDRIIACEMQGHGIELEGFYGSDHCPVSLELSE 345 (360)
Q Consensus 274 r~~~~~~~~~~~~T~~~~~~~~~-~~~~~rID~I~~s~~l~~~v~~~~i~~~~~~~~~~~~SDH~PV~v~l~~ 345 (360)
|.++|+.. +.|||++.....+ .+.+.||||||+|+.+..++.++.|.... ..+..+|||+||+++|++
T Consensus 200 R~~~p~~~--~~~T~~~~~~~~~~~~~g~RIDyi~~s~~~~~~v~~~~i~~~~--~~~~~~SDH~PV~~~~~~ 268 (268)
T PRK11756 200 RQLNPDVN--DRFSWFDYRSKGFDDNRGLRIDLILATQPLAERCVETGIDYDI--RGMEKPSDHAPIWATFKL 268 (268)
T ss_pred hhhCCCCC--CcccCcCCcccccccCCceEEEEEEeCHHHHhhheEeEEeHHH--hCCCCCCCcccEEEEEeC
Confidence 99999742 6799987655443 35689999999999999999999987532 123468999999999975
No 4
>TIGR00195 exoDNase_III exodeoxyribonuclease III. The model brings in reverse transcriptases at scores below 50, model also contains eukaryotic apurinic/apyrimidinic endonucleases which group in the same family
Probab=100.00 E-value=1.8e-34 Score=267.72 Aligned_cols=247 Identities=31% Similarity=0.613 Sum_probs=184.2
Q ss_pred eEEEEEeCccchhhhcCCchhHHHHHhhcCCCEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCCCCCC
Q 018111 42 LKFVTWNANSLLLRVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSSPPFK 121 (360)
Q Consensus 42 lrI~s~Ni~g~~~~~~~~~~~l~~~i~~~~pDIi~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 121 (360)
|||+||||+|++... ..+.++|+.++||||||||++.....+. .+ +.+ ..
T Consensus 1 mri~t~Ni~g~~~~~----~~~~~~l~~~~~DIi~LQE~~~~~~~~~------~~--------------~~~------~~ 50 (254)
T TIGR00195 1 MKIISWNVNGLRARL----HKGLAWLKENQPDVLCLQETKVQDEQFP------LE--------------PFH------KE 50 (254)
T ss_pred CEEEEEEcCcHHHhH----HHHHHHHHhcCCCEEEEEecccchhhCC------HH--------------Hhh------cC
Confidence 799999999987655 4589999999999999999976542111 00 011 15
Q ss_pred CceEEEecCCCCceeEEEEEeecCCCceeeccCC----CCcccEEEEEcCcEEEEEEEcCCCCCccchhhHHHHHHHHHH
Q 018111 122 NYQIWWSLADSKYAGTALLVKKCFQPKKVSFSLE----KTDGRVILAEFETFYLLNTYAPNNGWKEEENSFQRRRKWDKR 197 (360)
Q Consensus 122 gy~~~~~~~~~~~~Gvailsr~pi~~~~v~~~~~----~~~~r~l~v~~~~l~v~nvh~~~~~~~~~~~~~~~r~~~l~~ 197 (360)
||..++.. ..++.|++|++|.+ +..+...++ +..+|++.+++..+.++|+|+|++.... ..++..|.++++.
T Consensus 51 g~~~~~~~-~~g~~Gvailsr~~--~~~~~~~~~~~~~~~~~r~i~~~~~~~~l~~~~~p~~~~~~-~~~~~~r~~~~~~ 126 (254)
T TIGR00195 51 GYHVFFSG-QKGYSGVAIFSKEE--PLSVRRGFGVEEEDAEGRIIMAEFDSFLVINGYFPNGSRDD-SEKLPYKLQWLEA 126 (254)
T ss_pred CcEEEEec-CCCcceEEEEEcCC--cceEEECCCCcccccCCCEEEEEECCEEEEEEEccCCCCCC-CccHHHHHHHHHH
Confidence 88766653 35677999999954 233332221 2578899999999999999999864332 2245568889999
Q ss_pred HHHHHHhc--CCCCEEEEccccccCccccCcChhhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHHHhhhhcCCeeeeeec
Q 018111 198 IQEFVLQC--SGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIAERKRFGAILKEGRLIDAYRF 275 (360)
Q Consensus 198 l~~~l~~~--~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~D~~r~ 275 (360)
|..++.+. .+.|+|||||||..+.+.|..++.. .....++.+.+++++..+++.+ |+|+||.
T Consensus 127 l~~~~~~~~~~~~pvIi~GDfN~~~~~~d~~~~~~---------------~~~~~~~~~~e~~~~~~l~~~~-l~D~~r~ 190 (254)
T TIGR00195 127 LQNYLEKLVDKDKPVLICGDMNIAPTEIDLHSPDE---------------NRNHTGFLPEEREWLDRLLEAG-LVDTFRK 190 (254)
T ss_pred HHHHHHHHHhcCCcEEEEeecccCCChhhccChhh---------------cCCCcCcChHHHHHHHHHHHcC-CEeeecc
Confidence 99988764 4689999999999999887765532 2345678888999999999765 9999999
Q ss_pred cccCCCCCcceeccCCCCCcc-cCccceeEEEEeChhhhhhheeeEeccCccccCCCCCCCccceEEee
Q 018111 276 LHKEKDMDCGFSWSGNPIGKY-RGKRMRIDYFIVSEELKDRIIACEMQGHGIELEGFYGSDHCPVSLEL 343 (360)
Q Consensus 276 ~~~~~~~~~~~T~~~~~~~~~-~~~~~rID~I~~s~~l~~~v~~~~i~~~~~~~~~~~~SDH~PV~v~l 343 (360)
.++.. +.|||+..+.... .+.+.||||||+|+++..++.++.+..... ....+|||+||+++|
T Consensus 191 ~~~~~---~~~T~~~~~~~~~~~~~g~RID~i~~s~~~~~~v~~~~i~~~~~--~~~~~SDH~Pv~~~~ 254 (254)
T TIGR00195 191 FNPDE---GAYSWWDYRTKARDRNRGWRIDYFLVSEPLKERCVDCGIDYDIR--GSEKPSDHCPVVLEF 254 (254)
T ss_pred cCCCC---CCCcccCCcCCccccCCceEEEEEEECHHHHhhhhEEEEcHHHh--cCCCCCCcccEEEeC
Confidence 98874 6799986544322 345789999999999998899999975321 124789999999985
No 5
>TIGR00633 xth exodeoxyribonuclease III (xth). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=2e-32 Score=253.44 Aligned_cols=248 Identities=34% Similarity=0.656 Sum_probs=177.3
Q ss_pred eEEEEEeCccchhhhcCCchhH-HHHHhhcCCCEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCCCCC
Q 018111 42 LKFVTWNANSLLLRVKNNWPEF-SNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSSPPF 120 (360)
Q Consensus 42 lrI~s~Ni~g~~~~~~~~~~~l-~~~i~~~~pDIi~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~ 120 (360)
|||+||||+|.+...+ .+ .++|+..+||||||||++.....+. ..+. ..
T Consensus 1 lri~t~Nv~g~~~~~~----~~~~~~l~~~~~DIv~LQE~~~~~~~~~------------------------~~~~--~~ 50 (255)
T TIGR00633 1 MKIISWNVNGLRARLH----KLFLDWLKEEQPDVLCLQETKVADEQFP------------------------AELF--EE 50 (255)
T ss_pred CEEEEEecccHHHHhh----ccHHHHHHhcCCCEEEEEeccCchhhCC------------------------HhHh--cc
Confidence 7999999999877653 45 9999999999999999987642111 0000 12
Q ss_pred CCceEEEecCC-CCceeEEEEEeecCCCceeeccCC--CCcccEEEEEcCcEEEEEEEcCCCCCccchhhHHHHHHHHHH
Q 018111 121 KNYQIWWSLAD-SKYAGTALLVKKCFQPKKVSFSLE--KTDGRVILAEFETFYLLNTYAPNNGWKEEENSFQRRRKWDKR 197 (360)
Q Consensus 121 ~gy~~~~~~~~-~~~~Gvailsr~pi~~~~v~~~~~--~~~~r~l~v~~~~l~v~nvh~~~~~~~~~~~~~~~r~~~l~~ 197 (360)
.||..++.... .+.+|+||++|.|+......+... +..+|++.+++..+.|+++|+|++..... ..+..|.++++.
T Consensus 51 ~g~~~~~~~~~~~~~~G~ailsr~~~~~~~~~~~~~~~~~~~r~l~~~~~~~~i~~vy~p~~~~~~~-~~~~~r~~~~~~ 129 (255)
T TIGR00633 51 LGYHVFFHGAKSKGYSGVAILSKVEPLDVRYGFGGEEHDEEGRVITAEFDGFTVVNVYVPNGGSRGL-ERLEYKLQFWDA 129 (255)
T ss_pred CCceEEEeecccCCcceEEEEEcCCcceEEECCCCCcccCCCcEEEEEECCEEEEEEEccCCCCCCc-hhHHHHHHHHHH
Confidence 68876665433 367799999999864333211211 24677888888899999999998773321 134457777777
Q ss_pred HHHHHHh--cCCCCEEEEccccccCccccCcChhhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHHHhhhhcCCeeeeeec
Q 018111 198 IQEFVLQ--CSGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIAERKRFGAILKEGRLIDAYRF 275 (360)
Q Consensus 198 l~~~l~~--~~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~D~~r~ 275 (360)
+.+.+.+ ..+.|+|+|||||+.+...|..++. .+....++.+.++..+..+++.+ |+|+|+.
T Consensus 130 l~~~~~~~~~~~~~~Il~GDFN~~~~~~d~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~-l~D~~~~ 193 (255)
T TIGR00633 130 LFQYYEKELDAGKPVIICGDMNVAHTEIDLGNPK---------------ENKGNAGFTPEEREWFDELLEAG-LVDTFRH 193 (255)
T ss_pred HHHHHHHHHhcCCcEEEEeecccCCChHHccChh---------------hcCCCCCcCHHHHHHHHHHHHcC-CEecchh
Confidence 7776643 2567999999999999876665433 12344566777788899888855 9999999
Q ss_pred cccCCCCCcceeccCCCCCcc-cCccceeEEEEeChhhhhhheeeEeccCccccCCCCCCCccceEEeee
Q 018111 276 LHKEKDMDCGFSWSGNPIGKY-RGKRMRIDYFIVSEELKDRIIACEMQGHGIELEGFYGSDHCPVSLELS 344 (360)
Q Consensus 276 ~~~~~~~~~~~T~~~~~~~~~-~~~~~rID~I~~s~~l~~~v~~~~i~~~~~~~~~~~~SDH~PV~v~l~ 344 (360)
.+|... +.|||+....... ...+.||||||+++++..++..+.+... ..+|||+||+++|+
T Consensus 194 ~~~~~~--~~~T~~~~~~~~~~~~~~~rID~i~~s~~~~~~~~~~~i~~~------~~~SDH~pv~~~~~ 255 (255)
T TIGR00633 194 FNPDTE--GAYTWWDYRSGARDRNRGWRIDYFLVSEPLAERVVDSYIDSE------IRGSDHCPIVLELD 255 (255)
T ss_pred hCCCCC--CcCcCcCCccCccccCCceEEEEEEECHHHHhhhcEeEECCC------CCCCCcccEEEEEC
Confidence 888753 4799986543222 2346899999999999877888888742 24599999999984
No 6
>PRK05421 hypothetical protein; Provisional
Probab=99.89 E-value=2.6e-22 Score=187.23 Aligned_cols=211 Identities=17% Similarity=0.162 Sum_probs=122.6
Q ss_pred CCCeEEEEEeCccchhhhcCCchhHHHHHhhcCCCEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCCC
Q 018111 39 KDPLKFVTWNANSLLLRVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSSP 118 (360)
Q Consensus 39 ~~~lrI~s~Ni~g~~~~~~~~~~~l~~~i~~~~pDIi~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~ 118 (360)
.++|||+||||++..... +....+.+ ..+||||||||+..... . .++ ...
T Consensus 41 ~~~lri~t~NI~~~~~~~---~~~~l~~l-~~~~DiI~LQEv~~~~~-~-------~~~--------------~~~---- 90 (263)
T PRK05421 41 EERLRLLVWNIYKQQRAG---WLSVLKNL-GKDADLVLLQEAQTTPE-L-------VQF--------------ATA---- 90 (263)
T ss_pred CCceeEEEEEcccccccc---HHHHHHHh-ccCCCEEEEEecccCcc-h-------HHH--------------hhc----
Confidence 468999999998776432 13455555 88999999999975432 0 000 111
Q ss_pred CCCCceE--EEec-CCCCceeEEEEEeecCCCceeeccC-CC-Cccc-EEEEE--c---CcEEEEEEEcCCCCCccchhh
Q 018111 119 PFKNYQI--WWSL-ADSKYAGTALLVKKCFQPKKVSFSL-EK-TDGR-VILAE--F---ETFYLLNTYAPNNGWKEEENS 187 (360)
Q Consensus 119 ~~~gy~~--~~~~-~~~~~~Gvailsr~pi~~~~v~~~~-~~-~~~r-~l~v~--~---~~l~v~nvh~~~~~~~~~~~~ 187 (360)
.+++. .... ...+.+|++|+||.|+........- +. ..+| ++.+. + ..+.|+|+|+.+....
T Consensus 91 --~~~~~~~~~~~~~~~~~~GvaiLSR~pi~~~~~~~~~~~~~~~~r~~l~a~~~~~~g~~l~v~ntHl~~~~~~----- 163 (263)
T PRK05421 91 --NYLAADQAPAFVLPQHPSGVMTLSKAHPVYCCPLREREPWLRLPKSALITEYPLPNGRTLLVVNIHAINFSLG----- 163 (263)
T ss_pred --ccchHHhccccccCCCccceeEeeecccceeeccCCCCccccCcceeEEEEEEeCCCCEEEEEEECccccCcC-----
Confidence 22321 1111 1334789999999997432211100 10 1222 33333 2 2599999999765432
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEccccccCccccCcChhhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHHHhhhhcC
Q 018111 188 FQRRRKWDKRIQEFVLQCSGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIAERKRFGAILKEG 267 (360)
Q Consensus 188 ~~~r~~~l~~l~~~l~~~~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 267 (360)
...|..+++.|.+.+.+. ..|+|||||||+.+... ...+..+....
T Consensus 164 ~~~r~~q~~~l~~~~~~~-~~p~Il~GDFN~~~~~~---------------------------------~~~l~~~~~~~ 209 (263)
T PRK05421 164 VDVYSKQLEPIGDQIAHH-SGPVILAGDFNTWSRKR---------------------------------MNALKRFAREL 209 (263)
T ss_pred hHHHHHHHHHHHHHHHhC-CCCEEEEcccccCcccc---------------------------------hHHHHHHHHHc
Confidence 123556677787777543 57999999999743210 12334444443
Q ss_pred CeeeeeeccccCCCCCcceeccCCCCCcccCccceeEEEEeChhhhhhheeeEeccCccccCCCCCCCccceEEeeecC
Q 018111 268 RLIDAYRFLHKEKDMDCGFSWSGNPIGKYRGKRMRIDYFIVSEELKDRIIACEMQGHGIELEGFYGSDHCPVSLELSEA 346 (360)
Q Consensus 268 ~l~D~~r~~~~~~~~~~~~T~~~~~~~~~~~~~~rID~I~~s~~l~~~v~~~~i~~~~~~~~~~~~SDH~PV~v~l~~~ 346 (360)
++.+.+. +... ...+ + ..+|||||++ ++ .+..+.+.. ...|||+||+++|.+.
T Consensus 210 ~l~~~~~---~~~~--~~~~--------~---~~~ID~I~~~-~~--~v~~~~v~~-------~~~SDH~Pv~a~l~l~ 262 (263)
T PRK05421 210 GLKEVRF---TDDQ--RRRA--------F---GRPLDFVFYR-GL--NVSKASVLV-------TRASDHNPLLVEFSLK 262 (263)
T ss_pred CCCccCc---CCcc--cccc--------c---CCCcceEEEC-Cc--EEEEEEcCC-------CCCCCccCEEEEEEec
Confidence 3444311 1000 0001 1 3699999985 44 466677663 4689999999999874
No 7
>COG3568 ElsH Metal-dependent hydrolase [General function prediction only]
Probab=99.87 E-value=1.5e-21 Score=177.65 Aligned_cols=233 Identities=21% Similarity=0.228 Sum_probs=133.1
Q ss_pred eEEEEEeCccchhh--hcCCchhHHHHHhhcCCCEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCCCC
Q 018111 42 LKFVTWNANSLLLR--VKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSSPP 119 (360)
Q Consensus 42 lrI~s~Ni~g~~~~--~~~~~~~l~~~i~~~~pDIi~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~ 119 (360)
++|+||||+..... .+.+.+.+.+.|++..+|||||||+......... .+.++. .++.+...
T Consensus 10 ~~v~TyNih~~~~~~d~r~~~~r~~~~i~~~~~Div~LQEv~~~~~~~r~------~~~~~~-------~~~~~~~~--- 73 (259)
T COG3568 10 FKVLTYNIHKGFGAFDRRFDLPRIAEVIREVGADIVALQEVDGAFGRHRD------GLLDLP-------HLLGRLGL--- 73 (259)
T ss_pred eEEEEEEEEEccCccCceecHHHHHHHHHhhccCeeeeeccccccccccc------ccchhH-------HHHHHhcC---
Confidence 89999999654433 2224578999999999999999999853211110 011100 11111111
Q ss_pred CCCceEEEe----cCCCCceeEEEEEeecCCCceeeccCCC---Cccc-EEEEEc-----CcEEEEEEEcCCCCCccchh
Q 018111 120 FKNYQIWWS----LADSKYAGTALLVKKCFQPKKVSFSLEK---TDGR-VILAEF-----ETFYLLNTYAPNNGWKEEEN 186 (360)
Q Consensus 120 ~~gy~~~~~----~~~~~~~Gvailsr~pi~~~~v~~~~~~---~~~r-~l~v~~-----~~l~v~nvh~~~~~~~~~~~ 186 (360)
..|.+... ....+..|++|+|+.|+..+.. ..++. .+.| .+.+++ +++.|+|+|+.-..
T Consensus 74 -~~~~~~~~~~~a~~~~~~~GnaiLS~~pi~~v~~-~~lp~~~~~~~Rgal~a~~~~~~g~~l~V~~~HL~l~~------ 145 (259)
T COG3568 74 -APYWWSGAAFGAVYGEGQHGNAILSRLPIRDVEN-LALPDPTGLEPRGALLAEIELPGGKPLRVINAHLGLSE------ 145 (259)
T ss_pred -CccccchhhhhhhcccceeeeEEEecCcccchhh-ccCCCCCCCCCceeEEEEEEcCCCCEEEEEEEeccccH------
Confidence 11111111 1233467999999998743332 22331 2333 444332 38999999997333
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCCEEEEccccccCccccCcChhhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHHHhhhh-
Q 018111 187 SFQRRRKWDKRIQEFVLQCSGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIAERKRFGAILK- 265 (360)
Q Consensus 187 ~~~~r~~~l~~l~~~l~~~~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 265 (360)
..|.++++.|...+......|+|+|||||+.|.+.++.-.. . ..+.
T Consensus 146 --~~R~~Q~~~L~~~~~l~~~~p~vl~GDFN~~p~s~~yr~~~-------------------~------------~~~~~ 192 (259)
T COG3568 146 --ESRLRQAAALLALAGLPALNPTVLMGDFNNEPGSAEYRLAA-------------------R------------SPLNA 192 (259)
T ss_pred --HHHHHHHHHHHhhccCcccCceEEEccCCCCCCCccceecc-------------------C------------Cchhh
Confidence 23666677777743223444999999999999886542110 0 0111
Q ss_pred cCCeeeeeeccccCCCCCcceeccCCCCCcccCccceeEEEEeChhhhhhheeeEeccCccccCCCCCCCccceEEeeec
Q 018111 266 EGRLIDAYRFLHKEKDMDCGFSWSGNPIGKYRGKRMRIDYFIVSEELKDRIIACEMQGHGIELEGFYGSDHCPVSLELSE 345 (360)
Q Consensus 266 ~~~l~D~~r~~~~~~~~~~~~T~~~~~~~~~~~~~~rID~I~~s~~l~~~v~~~~i~~~~~~~~~~~~SDH~PV~v~l~~ 345 (360)
...+.+.+....+.. .-||+++.. ..+|||||+|+++. +....+..+.. ....|||+||.++|.+
T Consensus 193 ~~~~~~~~~~a~~~~----~~tfps~~p------~lriD~Ifvs~~~~--i~~~~v~~~~~---a~~aSDHlPl~aeL~~ 257 (259)
T COG3568 193 QAALTGAFAPAVGRT----IRTFPSNTP------LLRLDRIFVSKELA--IRSVHVLTDRL---ARVASDHLPLLAELRL 257 (259)
T ss_pred ccccccccCcccCcc----cCCCCCCCc------cccccEEEecCccc--EEEEEeecCCC---ccccccccceEEEEec
Confidence 011333333322211 135554321 25999999999985 55666665422 2479999999999987
Q ss_pred C
Q 018111 346 A 346 (360)
Q Consensus 346 ~ 346 (360)
.
T Consensus 258 ~ 258 (259)
T COG3568 258 K 258 (259)
T ss_pred C
Confidence 5
No 8
>TIGR03395 sphingomy sphingomyelin phosphodiesterase. Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins.
Probab=99.80 E-value=2.2e-18 Score=162.15 Aligned_cols=157 Identities=18% Similarity=0.127 Sum_probs=91.0
Q ss_pred eEEEEEeCccchh------hhcCCchhHHHHHhhcCCCEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhh
Q 018111 42 LKFVTWNANSLLL------RVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRAL 115 (360)
Q Consensus 42 lrI~s~Ni~g~~~------~~~~~~~~l~~~i~~~~pDIi~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 115 (360)
|||+||||+.+.. ....|...+.+.+...+||||||||+..... . ..+.+.|
T Consensus 1 lkVmtyNv~~l~~~~~~~~g~~~R~~~i~~~~~~~~~DVV~LQEv~~~~~------------~----------~~l~~~L 58 (283)
T TIGR03395 1 IKILSHNVYMLSTNLYPNWGQMERADLIASADYIKNQDVVILNEAFDTSA------------S----------KRLLDNL 58 (283)
T ss_pred CeEEEEEeeeecccccCCccHhHHHHHHHHhhcccCCCEEEEecccchHH------------H----------HHHHHHH
Confidence 6899999964221 1122335677778888999999999965421 0 0112222
Q ss_pred CCCCCCCceEEEe---------------cCCCCceeEEEEEeecCCCce-eeccCCC-----CcccEEEEEcC----cEE
Q 018111 116 SSPPFKNYQIWWS---------------LADSKYAGTALLVKKCFQPKK-VSFSLEK-----TDGRVILAEFE----TFY 170 (360)
Q Consensus 116 ~~~~~~gy~~~~~---------------~~~~~~~Gvailsr~pi~~~~-v~~~~~~-----~~~r~l~v~~~----~l~ 170 (360)
... ..|+.... ......+|++|+||.||.... ..++... ..+.++.+++. .+.
T Consensus 59 ~~~--yp~~~~~~g~~~~g~~~~~g~~~~~~~~~~G~~iLSr~Pi~~~~~~~f~~~~~~d~~~~kg~l~a~i~~~g~~~~ 136 (283)
T TIGR03395 59 REE--YPYQTDVIGRSKKGWDKTLGNYSSSALEDGGVAIVSKWPIEEKIQYIFNKGCGADNLSNKGFAYVKINKNGKKFH 136 (283)
T ss_pred Hhh--CCceEeecccccccchhccccccccCccCCEEEEEECCCccccEEEEccCCCCCccccCCceEEEEEecCCeEEE
Confidence 210 12221100 001235699999999985332 2222111 12234444432 699
Q ss_pred EEEEEcCCCCCccchhh-HHHHHHHHHHHHHHHHhc---CCCCEEEEccccccCcc
Q 018111 171 LLNTYAPNNGWKEEENS-FQRRRKWDKRIQEFVLQC---SGKPLIWCGDLNVSHEE 222 (360)
Q Consensus 171 v~nvh~~~~~~~~~~~~-~~~r~~~l~~l~~~l~~~---~~~p~Il~GDFN~~~~~ 222 (360)
|+|+|+.+......... ...|..++++|.+++.+. .+.|+|||||||..+.+
T Consensus 137 v~~THL~~~~~~~~~~~~~~~R~~Q~~~i~~~i~~~~~~~~~pvIl~GDfN~~~~s 192 (283)
T TIGR03395 137 VIGTHLQAQDSMCSKLGPASIRANQLNEIQDFIDSKNIPKDETVLIGGDLNVNKGS 192 (283)
T ss_pred EEEeCCCCCcccccccccHHHHHHHHHHHHHHHhhccCCCCceEEEEeeCCCCCCC
Confidence 99999987643221111 234778888898888642 36789999999997765
No 9
>PRK15251 cytolethal distending toxin subunit CdtB; Provisional
Probab=99.78 E-value=2.2e-17 Score=151.70 Aligned_cols=171 Identities=13% Similarity=0.150 Sum_probs=102.7
Q ss_pred CCCCeEEEEEeCccchhhhcCCch-hHHHHHhhc-CCCEEEEeeeecCCCCCCCCCccccccchhhhhhHH--HHHHHHH
Q 018111 38 KKDPLKFVTWNANSLLLRVKNNWP-EFSNFITTF-DPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASRE--EKLILMR 113 (360)
Q Consensus 38 ~~~~lrI~s~Ni~g~~~~~~~~~~-~l~~~i~~~-~pDIi~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~ 113 (360)
.-..++|+|||++|......-.|. .+..++... ++|||++||+..-........+ ..+..+.-+| |++..
T Consensus 21 ~~~~~~~~twn~qg~s~~~~~kw~~~v~~l~~~~~~~DIla~QEags~p~~a~~~~~----~~~~~g~~~~v~ey~w~-- 94 (271)
T PRK15251 21 NLEDYKVATWNLQGSSASTESKWNVNVRQLLSGENPADILMVQEAGSLPSSAVPTGR----HVQPGGVGIPIDEYTWN-- 94 (271)
T ss_pred ccccceEEEeecCCCCCCChhhhhhhHHHHhcCCCCCCEEEEEecCCCccccccccc----cccccccccCcccEEEE--
Confidence 456799999999987543322243 688888874 6999999999754332111000 0000000000 11111
Q ss_pred hhCCCCCCCceEEEecC---CCCceeEEEEEeecCCCceeeccCCC-CcccEEEEEcCcEEEEEEEcCCCCCccchhhHH
Q 018111 114 ALSSPPFKNYQIWWSLA---DSKYAGTALLVKKCFQPKKVSFSLEK-TDGRVILAEFETFYLLNTYAPNNGWKEEENSFQ 189 (360)
Q Consensus 114 ~l~~~~~~gy~~~~~~~---~~~~~Gvailsr~pi~~~~v~~~~~~-~~~r~l~v~~~~l~v~nvh~~~~~~~~~~~~~~ 189 (360)
|.....+++.+++... ..+..|+||+||.+.....+ .+.+. ..+.++.++++.+.++++|+.+.... +
T Consensus 95 -l~~~srpgm~YiY~~aiD~~ggr~glAIlSr~~a~~~~~-l~~p~~~~Rpilgi~i~~~~ffstH~~a~~~~-d----- 166 (271)
T PRK15251 95 -LGTRSRPNQVYIYYSRVDVGANRVNLAIVSRRRADEVIV-LRPPTVASRPIIGIRIGNDVFFSIHALANGGT-D----- 166 (271)
T ss_pred -ccCccCCCceEEEEecccCCCCceeEEEEecccccceEE-ecCCCCcccceEEEEecCeEEEEeeecCCCCc-c-----
Confidence 2211224454333322 23477999999998643222 22222 34558888888899999999988522 2
Q ss_pred HHHHHHHHHHHHHH-hcCCCCEEEEccccccCccc
Q 018111 190 RRRKWDKRIQEFVL-QCSGKPLIWCGDLNVSHEEI 223 (360)
Q Consensus 190 ~r~~~l~~l~~~l~-~~~~~p~Il~GDFN~~~~~~ 223 (360)
+.++++.+.+++. +....|++||||||..|.+.
T Consensus 167 -a~aiV~~I~~~f~~~~~~~pw~I~GDFNr~P~sl 200 (271)
T PRK15251 167 -AGAIVRAVHNFFRPNMRHINWMIAGDFNRSPDRL 200 (271)
T ss_pred -HHHHHHHHHHHHhhccCCCCEEEeccCCCCCcch
Confidence 4455777777775 44557999999999988864
No 10
>PTZ00297 pantothenate kinase; Provisional
Probab=99.78 E-value=1.2e-17 Score=184.64 Aligned_cols=262 Identities=14% Similarity=0.145 Sum_probs=134.5
Q ss_pred CCeEEEEEeCccchh-hhcCCchhHHHHHhhc-CCCEEEEeeeecCCCC-CCCCCccccccchhhhhhHHHHHHHHHhhC
Q 018111 40 DPLKFVTWNANSLLL-RVKNNWPEFSNFITTF-DPDVIALQEVRMPAAG-SKDAPKNHQELKDDTKASREEKLILMRALS 116 (360)
Q Consensus 40 ~~lrI~s~Ni~g~~~-~~~~~~~~l~~~i~~~-~pDIi~LQEv~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 116 (360)
..+||+|||++.+.. ........+..+|+.. +||||||||+...... ++.. .|. +....+...+.
T Consensus 9 ~~l~VlTyNv~~~~~~~~~~~~~ri~~~i~~l~~~DIv~lQEvf~~~~~~~~~~----~~~--------~~~~~~~~~l~ 76 (1452)
T PTZ00297 9 AQARVLSYNFNILPRGCGGFQHERIETFLASVDAYDVVLLQEVYAASVLPYFLQ----KQL--------CFQKMLVDELK 76 (1452)
T ss_pred CceEEEEEEccccCCCcccccHHHHHHHHHhccCCCEEEEeccccccccccccc----ccc--------hhhHHHHHHHH
Confidence 479999999974421 0111236799999984 7899999999864310 1110 110 00001122222
Q ss_pred CCCCCCceEEEe-cCC---C-------CceeEEEEEeecCCCceeeccCCC-------CcccEEEE--Ec-------CcE
Q 018111 117 SPPFKNYQIWWS-LAD---S-------KYAGTALLVKKCFQPKKVSFSLEK-------TDGRVILA--EF-------ETF 169 (360)
Q Consensus 117 ~~~~~gy~~~~~-~~~---~-------~~~Gvailsr~pi~~~~v~~~~~~-------~~~r~l~v--~~-------~~l 169 (360)
. .||.++.. ... . ...|+||+||+||..... +.++. ..+.++.+ ++ ..+
T Consensus 77 ~---~g~~~~~~~~~~~~~~~~~~~~~~~~G~AILSR~PI~~~~~-~~l~~~~~~~~~~~RG~L~a~I~vp~~~g~~~~v 152 (1452)
T PTZ00297 77 A---RGFHHYVISKQPSYLTMLRYNVCSDNGLIIASRFPIWQRGS-YTFRNHERGEQSVRRGCLFAEVEVPLAEGGSQRI 152 (1452)
T ss_pred h---cCCceeEeecCccccccccCccccCCEEEEEECCChhhcee-eecCcccccccccccceEEEEEEccccCCCCceE
Confidence 1 47744332 111 1 456999999999843222 22221 11223333 32 269
Q ss_pred EEEEEEcCCCCCccchhhHHHHHHHHHHHHHHHHh-----------cCCCCEEEEccccccCccccCcChhhhhhhhcCC
Q 018111 170 YLLNTYAPNNGWKEEENSFQRRRKWDKRIQEFVLQ-----------CSGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNG 238 (360)
Q Consensus 170 ~v~nvh~~~~~~~~~~~~~~~r~~~l~~l~~~l~~-----------~~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~ 238 (360)
.|+++|+........ |.++++++.+++.. ..+.|+|||||||..-.+ ..+
T Consensus 153 ~v~~tHL~~~~~~~~------R~~Q~~ql~~~i~~~i~~~~~~~~~~~~~PvILaGDFN~~~~~--~~~----------- 213 (1452)
T PTZ00297 153 VFFNVHLRQEDSLPS------TSSQVQETRRFVESVIANVYEQNNDGAEIPFVIAGDFNINGID--PHN----------- 213 (1452)
T ss_pred EEEEeCCCCCCCcch------HHHHHHHHHHHHHHhhhhhcccccCCCCCCEEEEeeCCCcccc--ccc-----------
Confidence 999999987754322 34445555555543 145699999999974210 000
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHhhhhc-CCeeeeeeccccCCC-CCcceeccC-C-CCCcccCccceeEEEEeChhhhh
Q 018111 239 YVPPNKEDWGQPGFTIAERKRFGAILKE-GRLIDAYRFLHKEKD-MDCGFSWSG-N-PIGKYRGKRMRIDYFIVSEELKD 314 (360)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~D~~r~~~~~~~-~~~~~T~~~-~-~~~~~~~~~~rID~I~~s~~l~~ 314 (360)
.....+.-...+..+... .++.|++........ ..+..+|++ . +..+......||||||+++.+.
T Consensus 214 ----------~~~~s~e~~~ml~~l~~~~~~l~dv~~~~~~~~~~T~p~~~~fP~~~p~~~~~~~~~riD~Ifv~~~v~- 282 (1452)
T PTZ00297 214 ----------GGHPTKRFQELLNELQDLGSGVREVIYDETGQHPPTRPPILFFPEQSKLERYSSTPQRQDYFFVTPCVQ- 282 (1452)
T ss_pred ----------cCCccHHHHHHHHHhhhccccHhHHhHhhcCCCCCCCCccccccccCccccccCCCcceeEEEEeCCce-
Confidence 000001111222222221 224555443333211 012233322 1 0101112236999999998774
Q ss_pred hheeeEeccCcc--ccCCCCCCCccceEEeeecCCC
Q 018111 315 RIIACEMQGHGI--ELEGFYGSDHCPVSLELSEASS 348 (360)
Q Consensus 315 ~v~~~~i~~~~~--~~~~~~~SDH~PV~v~l~~~~~ 348 (360)
+.++.+..... ...+.++|||+||+++|.+...
T Consensus 283 -v~~~~v~~~~~~~~~~~~~~SDH~Pv~a~l~l~~~ 317 (1452)
T PTZ00297 283 -VEKPRIEKFVVSSRRPYTYLSDHFGVSARLTLPLN 317 (1452)
T ss_pred -EEEEEEecccccCCCCCCCcCcCccEEEEEEeCCC
Confidence 66777743210 1234689999999999998443
No 11
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional
Probab=99.78 E-value=1.1e-17 Score=169.87 Aligned_cols=156 Identities=19% Similarity=0.244 Sum_probs=90.6
Q ss_pred CCCCeEEEEEeCccch--------------hhhcCCchhHHHHHhhcCCCEEEEeeeecCCCCCCCCCccccccchhhhh
Q 018111 38 KKDPLKFVTWNANSLL--------------LRVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKA 103 (360)
Q Consensus 38 ~~~~lrI~s~Ni~g~~--------------~~~~~~~~~l~~~i~~~~pDIi~LQEv~~~~~~~~~~~~~~~~l~~~~~~ 103 (360)
....|||+||||..-. ..+..|...|++.|...+||||||||+.... +.
T Consensus 251 ~~~~frVmSYNILAd~ya~~dly~ycp~~aL~W~yRk~lIl~EI~~~~aDIICLQEV~~~~------------~~----- 313 (606)
T PLN03144 251 SAGTFTVLSYNILSDLYATSDMYSYCPPWALSWTYRRQNLLREIVGYRADILCLQEVQSDH------------FE----- 313 (606)
T ss_pred CCCCEEEEEeeeccccccCcccccCCCccccCHHHHHHHHHHHHHhcCCCEEEEeecCHHH------------HH-----
Confidence 3568999999994210 1122344789999999999999999996542 11
Q ss_pred hHHHHHHHHHhhCCCCCCCceEEEecCC--------CCceeEEEEEeecC-CCce---eecc-----C-C---------C
Q 018111 104 SREEKLILMRALSSPPFKNYQIWWSLAD--------SKYAGTALLVKKCF-QPKK---VSFS-----L-E---------K 156 (360)
Q Consensus 104 ~~~~~~~~~~~l~~~~~~gy~~~~~~~~--------~~~~Gvailsr~pi-~~~~---v~~~-----~-~---------~ 156 (360)
+++...|.+ .||..++.... ....|+|||.|..- ..+. +.+. . + .
T Consensus 314 -----d~~~p~L~~---~GY~Gv~~~Kt~~~~~~~~~~~DGcAIFyr~drFeLv~~~~ief~~~~lslt~~~~~s~~~~~ 385 (606)
T PLN03144 314 -----EFFAPELDK---HGYQALYKKKTTEVYTGNTYVIDGCATFFRRDRFSLVKKYEVEFNKAAQSLTEALIPSAQKKA 385 (606)
T ss_pred -----HHHHhhhhh---cCceEEEeCCCCccccccccCCceeEEEEECcceEEEEeeeeeccchhhccCccccccccchh
Confidence 111223332 58876664321 12568999998752 1111 1010 0 0 0
Q ss_pred Cccc--------EEEEEc-------------CcEEEEEEEcCCCCCccchhhHHHHHHHHHHHHHHHHhc---CCCCEEE
Q 018111 157 TDGR--------VILAEF-------------ETFYLLNTYAPNNGWKEEENSFQRRRKWDKRIQEFVLQC---SGKPLIW 212 (360)
Q Consensus 157 ~~~r--------~l~v~~-------------~~l~v~nvh~~~~~~~~~~~~~~~r~~~l~~l~~~l~~~---~~~p~Il 212 (360)
...| ++..+. ..|.|+|+|+.......+ -|..++..|.+.+... .+.|+||
T Consensus 386 ~l~Rl~kdNVAliv~Le~k~~~~~~~~~~~~~~l~VaNTHL~~~p~~~d-----vRl~Q~~~Ll~~l~~~~~~~~~PvIl 460 (606)
T PLN03144 386 ALNRLLKDNVALIVVLEAKFGNQGADNGGKRQLLCVANTHIHANQELKD-----VKLWQVHTLLKGLEKIAASADIPMLV 460 (606)
T ss_pred hhhhhccCcEEEEEEEEEecccccccCCCCccEEEEEEeeeccCCccch-----hHHHHHHHHHHHHHHHhhcCCCceEE
Confidence 0012 222222 138899999966554322 1444455555555432 4679999
Q ss_pred EccccccCccc
Q 018111 213 CGDLNVSHEEI 223 (360)
Q Consensus 213 ~GDFN~~~~~~ 223 (360)
|||||+.|.+.
T Consensus 461 cGDFNS~P~S~ 471 (606)
T PLN03144 461 CGDFNSVPGSA 471 (606)
T ss_pred eccCCCCCCCh
Confidence 99999999874
No 12
>KOG3873 consensus Sphingomyelinase family protein [Signal transduction mechanisms]
Probab=99.78 E-value=4.2e-19 Score=165.08 Aligned_cols=253 Identities=19% Similarity=0.183 Sum_probs=145.3
Q ss_pred CCCCeEEEEEeCccchhhhcC---CchhHHHHHhhcCCCEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHh
Q 018111 38 KKDPLKFVTWNANSLLLRVKN---NWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRA 114 (360)
Q Consensus 38 ~~~~lrI~s~Ni~g~~~~~~~---~~~~l~~~i~~~~pDIi~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 114 (360)
..-.+||++.|++|..-..+. |...+.+.+.....||+.|||++..++ + ++|.+.
T Consensus 5 ~a~~lriltlN~Wgip~~Sk~R~~Rm~~~g~~l~~E~yDiv~LQEvWs~eD-----------~-----------~~L~~~ 62 (422)
T KOG3873|consen 5 LALELRILTLNIWGIPYVSKDRRHRMDAIGDELASEKYDIVSLQEVWSQED-----------F-----------EYLQSG 62 (422)
T ss_pred hhheeeeeEeeccccccccchhHHHHHHHhHHHhhcccchhhHHHHHHHHH-----------H-----------HHHHHh
Confidence 445799999999998644332 346789999999999999999997742 1 344444
Q ss_pred hCCCCCCCc-eEEEecCCCCceeEEEEEeecCCCc-eeeccCCC----------Cccc---EEEEEcC--cEEEEEEEcC
Q 018111 115 LSSPPFKNY-QIWWSLADSKYAGTALLVKKCFQPK-KVSFSLEK----------TDGR---VILAEFE--TFYLLNTYAP 177 (360)
Q Consensus 115 l~~~~~~gy-~~~~~~~~~~~~Gvailsr~pi~~~-~v~~~~~~----------~~~r---~l~v~~~--~l~v~nvh~~ 177 (360)
.+.. ..| ++|.+ +-. +.|++||||+||... ...+++.+ ..|. ...+..+ .+.++|+|+.
T Consensus 63 ~ss~--yPysh~FHS-Gim-GaGL~vfSK~PI~~t~~~~y~lNG~p~~i~rGDWf~GK~Vgl~~l~~~g~~v~~yntHLH 138 (422)
T KOG3873|consen 63 CSSV--YPYSHYFHS-GIM-GAGLCVFSKHPILETLFHRYSLNGYPHAIHRGDWFGGKGVGLTVLLVGGRMVNLYNTHLH 138 (422)
T ss_pred cccc--CchHHhhhc-ccc-cCceEEeecCchhhhhhhccccCCccceeeeccccccceeEEEEEeeCCEEeeeeehhcc
Confidence 4321 223 33333 222 569999999998421 12233321 1111 1222222 4666666655
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHHHhc--CCCCEEEEccccccCccccCcChhhhhhhhcCCCCCCCCCCCCCCCCCHH
Q 018111 178 NNGWKEEENSFQRRRKWDKRIQEFVLQC--SGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIA 255 (360)
Q Consensus 178 ~~~~~~~~~~~~~r~~~l~~l~~~l~~~--~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (360)
+......-.-..-|..++=++.+.++.. .+.-+|++||||+.|.+....
T Consensus 139 AeY~rq~D~YL~HR~~QAwdlaqfi~~t~q~~~vVI~~GDLN~~P~dl~~~----------------------------- 189 (422)
T KOG3873|consen 139 AEYDRQNDEYLCHRVAQAWDLAQFIRATRQNADVVILAGDLNMQPQDLGHK----------------------------- 189 (422)
T ss_pred ccccccCchhhhHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCcccccee-----------------------------
Confidence 4432211111112444444566666543 678899999999999875332
Q ss_pred HHHHHHhhhhcCCeeeeeeccccCCCCCc-------------------ceeccCCCCCcc-cCccceeEEEEeChhhh-h
Q 018111 256 ERKRFGAILKEGRLIDAYRFLHKEKDMDC-------------------GFSWSGNPIGKY-RGKRMRIDYFIVSEELK-D 314 (360)
Q Consensus 256 ~~~~~~~~l~~~~l~D~~r~~~~~~~~~~-------------------~~T~~~~~~~~~-~~~~~rID~I~~s~~l~-~ 314 (360)
++...+|+|+|+.++++..+.. .-||... .... ...+.||||+|++++.. .
T Consensus 190 -------ll~~a~l~daw~~~h~~q~e~~~~r~s~~~~l~~g~tcd~~~N~y~~a-qk~~ddp~~~RiDYvl~k~~~~~~ 261 (422)
T KOG3873|consen 190 -------LLLSAGLVDAWTSLHLDQCESDSFRLSEDKELVEGNTCDSPLNCYTSA-QKREDDPLGKRIDYVLVKPGDCNA 261 (422)
T ss_pred -------eeeccchhhhHhhhchhhhcCcccccchhhhhhcCCcccCcchhhhHH-HhCCCCccceeeeEEEEcCcceEE
Confidence 1212235555555544432111 1222110 0000 12378999999988853 3
Q ss_pred hheeeEeccCccccCCCCCCCccceEEeeecCCCchhHH
Q 018111 315 RIIACEMQGHGIELEGFYGSDHCPVSLELSEASSDSEKR 353 (360)
Q Consensus 315 ~v~~~~i~~~~~~~~~~~~SDH~PV~v~l~~~~~~~~~~ 353 (360)
.+.++++.....|......|||.+++++|.+.+.++..+
T Consensus 262 ~~a~~~~t~~rvP~~d~s~SDH~Al~a~L~I~~~~~~~~ 300 (422)
T KOG3873|consen 262 KIAEVEFTEPRVPGEDCSYSDHEALMATLKIFKQPPRSE 300 (422)
T ss_pred EeeeEEecCCCCCCCCCCccchhhheeEEEeecCCCCCC
Confidence 345555544344555678999999999999877665443
No 13
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling []. Proteins this domain is found in include: AP endonuclease proteins (4.2.99.18 from EC), DNase I proteins (3.1.21.1 from EC), Synaptojanin an inositol-1,4,5-trisphosphate phosphatase (3.1.3.56 from EC) and Sphingomyelinase (3.1.4.12 from EC).; PDB: 2J63_A 2JC4_A 3TEB_B 3MTC_A 3N9V_B 1ZWX_A 2F1N_A 1Y21_A 1NTF_A 2IMQ_X ....
Probab=99.72 E-value=5.8e-17 Score=146.37 Aligned_cols=151 Identities=24% Similarity=0.297 Sum_probs=76.5
Q ss_pred EEEeCccchhhh--cCCchhHHHHHhhcCCCEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCCCCCCC
Q 018111 45 VTWNANSLLLRV--KNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSSPPFKN 122 (360)
Q Consensus 45 ~s~Ni~g~~~~~--~~~~~~l~~~i~~~~pDIi~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~g 122 (360)
+||||++..... ..+...|.++|...+||||||||+..... .+.+...+... .+
T Consensus 1 ~T~Nv~~~~~~~~~~~~~~~i~~~i~~~~~Dii~LQEv~~~~~----------------------~~~~~~~~~~~--~~ 56 (249)
T PF03372_consen 1 MTWNVRGWNYRSDNDRKRREIAQWIAELDPDIIALQEVRNDDL----------------------SELLEEQLRGY--LG 56 (249)
T ss_dssp EEEEESTHHHHHHHHHHHHHHHHHHHHHT-SEEEEEEEESHHH----------------------HHHHHHHHHTC--TT
T ss_pred CeEEeCcCcccccchhHHHHHHHHHHhcCCCEEEEecchhhhh----------------------hhhhhhhcccc--cc
Confidence 699998842211 11124599999999999999999985411 01111222211 23
Q ss_pred ceEEEecCCC-----CceeEEEEEeecCCCceeecc--CCCCccc----------EEEE--EcCcEEEEEEEcCCCCCcc
Q 018111 123 YQIWWSLADS-----KYAGTALLVKKCFQPKKVSFS--LEKTDGR----------VILA--EFETFYLLNTYAPNNGWKE 183 (360)
Q Consensus 123 y~~~~~~~~~-----~~~Gvailsr~pi~~~~v~~~--~~~~~~r----------~l~v--~~~~l~v~nvh~~~~~~~~ 183 (360)
+..+...... +..|++|++|.|+........ ....... .+.+ ....|.|+++|+++....
T Consensus 57 ~~~~~~~~~~~~~~~~~~g~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~H~~~~~~~- 135 (249)
T PF03372_consen 57 YYGSFWPGNSPPSDAGGYGVAILSRSPIFSSVSYVFSLFSKPGIRIFRRSSKSKGIVPVSINGKPITVVNVHLPSSNDE- 135 (249)
T ss_dssp HEEEEEETSSSTTCSSSEEEEEEESSCCCEEEEEEEEEESSSTTCEEEEEEEEEEEEEEEEETEEEEEEEEETTSHHHH-
T ss_pred cccceeccccccccccCceEEEEEccccccccccccccccccccccccccccccccccccccceEEEeeeccccccchh-
Confidence 3333332222 346999999998631111111 1100000 0011 133688999998873321
Q ss_pred chhhHHHHHHHHHHHHHHHHhcCCCCEEEEccccccCccc
Q 018111 184 EENSFQRRRKWDKRIQEFVLQCSGKPLIWCGDLNVSHEEI 223 (360)
Q Consensus 184 ~~~~~~~r~~~l~~l~~~l~~~~~~p~Il~GDFN~~~~~~ 223 (360)
+.....+++..+..........|+|||||||+.+.+.
T Consensus 136 ---~~~~~~~~~~~~~~~~~~~~~~~~iv~GDfN~~~~~~ 172 (249)
T PF03372_consen 136 ---RQEQWRELLARIQKIYADNPNEPVIVMGDFNSRPDSR 172 (249)
T ss_dssp ---HHHHHHHHHHHHHHHHHTSSCCEEEEEEE-SS-BSSG
T ss_pred ---hhhhhhhhhhhhhhcccccccceEEEEeecccCCccc
Confidence 1111123333333333222334799999999988753
No 14
>KOG1294 consensus Apurinic/apyrimidinic endonuclease and related enzymes [Replication, recombination and repair]
Probab=99.71 E-value=1.4e-16 Score=151.20 Aligned_cols=259 Identities=35% Similarity=0.520 Sum_probs=190.6
Q ss_pred CCCeEEEEEeCccchhhhcCCchhHHHHHhhcCCCEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCCC
Q 018111 39 KDPLKFVTWNANSLLLRVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSSP 118 (360)
Q Consensus 39 ~~~lrI~s~Ni~g~~~~~~~~~~~l~~~i~~~~pDIi~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~ 118 (360)
.-.+.|+.||+.+.+...+. .-..++....+|++|+||++..-...+. ..+
T Consensus 61 ~~~~~i~~~~i~~~~~~~~~---~~~~~~~~~l~d~~~~~~t~~~i~~~~~--------------------------~~~ 111 (335)
T KOG1294|consen 61 RKVLNICPWDIAGLEACEKF---SGDPEISSELRDLQCLLETKCTIDSGPC--------------------------SHP 111 (335)
T ss_pred eeEeecCchhhhhhhhhhcc---ccchhccccchhhhhhhhccceeccCcc--------------------------eec
Confidence 33568999999888877664 3667777888999999999875322111 001
Q ss_pred CCCCc-eEEEecC--CCCceeEEEEEeecCCCceeeccCC--C----CcccEEEEEcCcEEEEEEEcCCCCCccchhhHH
Q 018111 119 PFKNY-QIWWSLA--DSKYAGTALLVKKCFQPKKVSFSLE--K----TDGRVILAEFETFYLLNTYAPNNGWKEEENSFQ 189 (360)
Q Consensus 119 ~~~gy-~~~~~~~--~~~~~Gvailsr~pi~~~~v~~~~~--~----~~~r~l~v~~~~l~v~nvh~~~~~~~~~~~~~~ 189 (360)
...+| +.++..+ ..++.|+..+++. .|..+.+.++ + ..++++.+++....++|.|.|+.......+.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~--~p~~v~~~~~~~~s~h~~~g~~i~~e~e~~~l~~~y~p~~~~~~~~~~~~ 189 (335)
T KOG1294|consen 112 TEKGYTHSLLSCASKKDGYSGEIDYSKF--KPLKVHYGFGAMGSDHRPVGRVIIAEFEIFILINTYVPNIGGGLVNLVYR 189 (335)
T ss_pred ccCCcccceeecccccCCccceeeeeec--ccceeeecccccCCccCccceEEEEeecceeeccccCcccccccchhhhh
Confidence 12677 5555443 3457788888887 4666766665 2 668899999999999999999988776544443
Q ss_pred HHHHHHHHHHHHHHhc-----CCCCEEEEccccccCccccCcChhhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHH-Hhh
Q 018111 190 RRRKWDKRIQEFVLQC-----SGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIAERKRF-GAI 263 (360)
Q Consensus 190 ~r~~~l~~l~~~l~~~-----~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 263 (360)
.+..+...+...+... ...++++|||.|..+...+...+ .+.+......+.++++.+|.++ ..+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~k~~~~~~v~~gd~nvs~~~i~~~~~----------~~~~~~~~~~~~~~t~e~R~~~~~~~ 259 (335)
T KOG1294|consen 190 ILDRWDKEIEEKRKKQSSSKNLKAPVVICGDLNVSHEEIDPSKP----------LVSPAGNTLSNAGFTPEERDSFFAEL 259 (335)
T ss_pred hhhhhHHHHHHHhhhccccccccCcceeccccccchhhcccccc----------ccccccCCcCCCCCCHHHhhhHHHhh
Confidence 3355566666666543 23479999999999988764321 2333344557899999999999 688
Q ss_pred hhcCCeeeeeeccccCCCCCcceecc-CCCCCcccCccceeEEEEeChhhhhhheeeEeccCccccCCCCCCCccceEEe
Q 018111 264 LKEGRLIDAYRFLHKEKDMDCGFSWS-GNPIGKYRGKRMRIDYFIVSEELKDRIIACEMQGHGIELEGFYGSDHCPVSLE 342 (360)
Q Consensus 264 l~~~~l~D~~r~~~~~~~~~~~~T~~-~~~~~~~~~~~~rID~I~~s~~l~~~v~~~~i~~~~~~~~~~~~SDH~PV~v~ 342 (360)
++.+.++|+|+.++++.. ..+|+| .......++.+.|+||++++..+....+.+.|...+ ..+|||+|+.+.
T Consensus 260 ~~~~~~iDt~r~~~~~~~--~~~t~Wk~~~~~r~~~~~~r~dy~~Vsk~~~n~~r~~~Ic~r~-----~~gsdh~pi~~~ 332 (335)
T KOG1294|consen 260 LEKGPLIDTYRELHKDQK--KAYTFWKYMPNGRQRGHGERCDYILVSKPGPNNGRRFYICSRP-----IHGSDHCPITLE 332 (335)
T ss_pred ccCCcceeehhhhcCCcc--ccccchhhccccccCCCCCceeEEEecCcCCCCCceeeeecCc-----cCCCCCCCeeee
Confidence 888889999999999874 366655 455556678899999999999999999999998752 568999999998
Q ss_pred eec
Q 018111 343 LSE 345 (360)
Q Consensus 343 l~~ 345 (360)
|.+
T Consensus 333 ~~~ 335 (335)
T KOG1294|consen 333 FFL 335 (335)
T ss_pred ecC
Confidence 864
No 15
>KOG2756 consensus Predicted Mg2+-dependent phosphodiesterase TTRAP [Signal transduction mechanisms]
Probab=99.65 E-value=1.3e-15 Score=136.81 Aligned_cols=247 Identities=21% Similarity=0.361 Sum_probs=139.0
Q ss_pred CCCcccccCCCCCCCCeEEEEEeCccchhh-hcCCchhHHHHHhhcCCCEEEEeeeecCCCCCCCCCccccccchhhhhh
Q 018111 26 GETTETSSEENSKKDPLKFVTWNANSLLLR-VKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKAS 104 (360)
Q Consensus 26 ~~~~~~~~~~~~~~~~lrI~s~Ni~g~~~~-~~~~~~~l~~~i~~~~pDIi~LQEv~~~~~~~~~~~~~~~~l~~~~~~~ 104 (360)
|.+...+..+......+.+++||+.|+... .-.|+..++++|+.++|||||||||-....
T Consensus 84 s~~s~~~T~ed~~g~~~S~~~WnidgLdln~l~~RMrAv~H~i~l~sPdiiflQEV~p~~y------------------- 144 (349)
T KOG2756|consen 84 STTSKISTSEDTQGSMFSLITWNIDGLDLNNLSERMRAVCHYLALYSPDVIFLQEVIPPYY------------------- 144 (349)
T ss_pred ccccccCChhhhcccEEEEEEeeccccccchHHHHHHHHHHHHHhcCCCEEEEeecCchhh-------------------
Confidence 333333333444556789999999887532 112346899999999999999999975432
Q ss_pred HHHHHHHHHhhCCCCCCCceEEEecCCCCceeEEEEEeecCCCcee-eccCC-CCccc---EEEEEcC--cEEEEEEEcC
Q 018111 105 REEKLILMRALSSPPFKNYQIWWSLADSKYAGTALLVKKCFQPKKV-SFSLE-KTDGR---VILAEFE--TFYLLNTYAP 177 (360)
Q Consensus 105 ~~~~~~~~~~l~~~~~~gy~~~~~~~~~~~~Gvailsr~pi~~~~v-~~~~~-~~~~r---~l~v~~~--~l~v~nvh~~ 177 (360)
.++ +-+. ..|..+.. ....+.+.+++.+..+...+. ...++ ..++| ++.+++. .+.+++.|+.
T Consensus 145 ----~~~-~K~~----s~y~i~~~-~~~~~~~~~~l~~s~~~Vks~~~i~F~NS~M~R~L~I~Ev~v~G~Kl~l~tsHLE 214 (349)
T KOG2756|consen 145 ----SYL-KKRS----SNYEIITG-HEEGYFTAIMLKKSRVKVKSQEIIPFPNSKMMRNLLIVEVNVSGNKLCLMTSHLE 214 (349)
T ss_pred ----HHH-HHhh----hheeEEEe-ccceeeeeeeeehhhcCccccceeccCcchhhheeEEEEEeecCceEEEEecccc
Confidence 122 2221 24444443 333455555554443322221 11222 13444 3333433 6899999999
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHHHhcCCCCEEEEccccccCccccCcChhhhhhhhcCCCCCCCCCCCCCCCCCHHHH
Q 018111 178 NNGWKEEENSFQRRRKWDKRIQEFVLQCSGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIAER 257 (360)
Q Consensus 178 ~~~~~~~~~~~~~r~~~l~~l~~~l~~~~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (360)
+...+.- ++.++=...++.+.+.|...++-.||++||+|--.... +..+
T Consensus 215 Str~h~P-~r~~qF~~~~~k~~EaIe~lPnA~ViFGGD~NlrD~ev------------------------~r~~------ 263 (349)
T KOG2756|consen 215 STRGHAP-ERMNQFKMVLKKMQEAIESLPNATVIFGGDTNLRDREV------------------------TRCG------ 263 (349)
T ss_pred CCCCCCh-HHHHHHHHHHHHHHHHHHhCCCceEEEcCcccchhhhc------------------------ccCC------
Confidence 8876531 11111112255666777667889999999999632211 0001
Q ss_pred HHHHhhhhcCCeeeeeeccc-cCCCCCcceeccCCCCCcc---cCccceeEEEEe-----ChhhhhhheeeEeccC-ccc
Q 018111 258 KRFGAILKEGRLIDAYRFLH-KEKDMDCGFSWSGNPIGKY---RGKRMRIDYFIV-----SEELKDRIIACEMQGH-GIE 327 (360)
Q Consensus 258 ~~~~~~l~~~~l~D~~r~~~-~~~~~~~~~T~~~~~~~~~---~~~~~rID~I~~-----s~~l~~~v~~~~i~~~-~~~ 327 (360)
+..+ .+|+|..+. |.. ..|||.+..+..- +....|+|+||. ++.+.. ........ ...
T Consensus 264 ------lPD~-~vDvWE~lg~p~~---~~FTwDT~~N~nl~G~~a~k~RfDRi~~r~~~~~G~~~~--~~l~l~g~~kiR 331 (349)
T KOG2756|consen 264 ------LPDN-IVDVWEFLGKPKH---CQFTWDTQMNSNLGGTAACKLRFDRIFFRAAAEEGHIIP--RSLDLLGLEKLR 331 (349)
T ss_pred ------CCch-HHHHHHHhCCCCc---CceeeecccCcccchhHHHHHHHHHHhhhhhhhcCCcCc--cccchhhhhhhc
Confidence 1123 788998888 444 6899965433222 233589999998 333321 11111110 000
Q ss_pred cCCCCCCCccceEEeee
Q 018111 328 LEGFYGSDHCPVSLELS 344 (360)
Q Consensus 328 ~~~~~~SDH~PV~v~l~ 344 (360)
.-...+|||.+|.++|.
T Consensus 332 gc~~fPSDHwgll~Tl~ 348 (349)
T KOG2756|consen 332 GCGRFPSDHWGLLCTLD 348 (349)
T ss_pred cCCCCCcccceeeeecc
Confidence 11257899999999986
No 16
>smart00476 DNaseIc deoxyribonuclease I. Deoxyribonuclease I catalyzes the endonucleolytic cleavage of double-stranded DNA. The enzyme is secreted outside the cell and also involved in apoptosis in the nucleus.
Probab=99.62 E-value=2.2e-14 Score=133.77 Aligned_cols=151 Identities=16% Similarity=0.152 Sum_probs=84.5
Q ss_pred CCeEEEEEeCccchhhhcCCc----hhHHHHHhhcCCCEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhh
Q 018111 40 DPLKFVTWNANSLLLRVKNNW----PEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRAL 115 (360)
Q Consensus 40 ~~lrI~s~Ni~g~~~~~~~~~----~~l~~~i~~~~pDIi~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 115 (360)
..|||+||||+.+... +..| ..++++|+ +||||++||+..... .. +..++++|
T Consensus 16 ~~l~I~SfNIr~fgd~-k~~~~~r~~~i~~il~--~~DIiglQEV~d~q~---------~~-----------l~~ll~~L 72 (276)
T smart00476 16 ASLRICAFNIQSFGDS-KMSNATLMSIIVKILS--RYDIALVQEVRDSDL---------SA-----------VPKLMDQL 72 (276)
T ss_pred CcEEEEEEECcccCCc-cccHHHHHHHHHHHhc--cCCEEEEEEeecchh---------HH-----------HHHHHHHH
Confidence 4699999999865432 2223 34555555 899999999986532 11 23345666
Q ss_pred CCCCCCCceEEEecCCCC---ceeEEEEEeecCCCceee--ccCCC-------Cccc-EEEEEc-------CcEEEEEEE
Q 018111 116 SSPPFKNYQIWWSLADSK---YAGTALLVKKCFQPKKVS--FSLEK-------TDGR-VILAEF-------ETFYLLNTY 175 (360)
Q Consensus 116 ~~~~~~gy~~~~~~~~~~---~~Gvailsr~pi~~~~v~--~~~~~-------~~~r-~l~v~~-------~~l~v~nvh 175 (360)
+.....+|.++.+....+ ..-.+++.|... .++. ..+++ .-.| ...+.+ ..+.++++|
T Consensus 73 n~~~~~~Y~~v~s~r~gr~~~~E~~a~~Yr~dr--v~v~~~~~f~d~~~~~~~~F~ReP~~~~F~~~~~~~~~F~li~~H 150 (276)
T smart00476 73 NSDSPNTYSYVSSEPLGRNSYKEQYLFLYRSDL--VSVLDSYLYDDGCECGNDVFSREPFVVKFSSPSTAVKEFVIVPLH 150 (276)
T ss_pred hhcCCCCceEEecCCCCCCCCCEEEEEEEecce--EEEcccceecCCCCCccccccccceEEEEEeCCCCCccEEEEEec
Confidence 654434788776543222 334688888752 1111 11111 1112 222222 269999999
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHHHHhcCCCCEEEEccccccCc
Q 018111 176 APNNGWKEEENSFQRRRKWDKRIQEFVLQCSGKPLIWCGDLNVSHE 221 (360)
Q Consensus 176 ~~~~~~~~~~~~~~~r~~~l~~l~~~l~~~~~~p~Il~GDFN~~~~ 221 (360)
+.+.... ++..+..+-+.+........++||+||||+...
T Consensus 151 ~~p~~~~------~e~~aL~~v~~~~~~~~~~~~villGDFNa~~~ 190 (276)
T smart00476 151 TTPEAAV------AEIDALYDVYLDVRQKWGTEDVIFMGDFNAGCS 190 (276)
T ss_pred CChHHHH------HHHHHHHHHHHHHHHhhccCCEEEEccCCCCCC
Confidence 9876421 111111222333333336789999999999654
No 17
>COG3021 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.56 E-value=1.3e-14 Score=134.79 Aligned_cols=147 Identities=15% Similarity=0.094 Sum_probs=92.1
Q ss_pred CCCCeEEEEEeCccchhhhcCCchhHHHHHhhcCCCEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCC
Q 018111 38 KKDPLKFVTWNANSLLLRVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSS 117 (360)
Q Consensus 38 ~~~~lrI~s~Ni~g~~~~~~~~~~~l~~~i~~~~pDIi~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 117 (360)
....++++++|++..+... ..+...+...++|++.+||+....... ..++.
T Consensus 85 ~~~~~~~l~~N~r~~n~~~----~k~Lsl~~~~~~D~v~~~E~~~~~~~~------------------------~~~l~- 135 (309)
T COG3021 85 DQRLLWNLQKNVRFDNASV----AKLLSLIQQLDADAVTTPEGVQLWTAK------------------------VGALA- 135 (309)
T ss_pred cchhhhhhhhhccccCcCH----HHHHHHHhhhCcchhhhHHHHHHhHhH------------------------HHHHH-
Confidence 5667889999986554444 468888888889999999997543210 11222
Q ss_pred CCCCCceEEEecCCC-CceeEEEEEeec-CCCceeeccCCCCcccEEEE----EcCcEEEEEEEcCCCCCccchhhHHHH
Q 018111 118 PPFKNYQIWWSLADS-KYAGTALLVKKC-FQPKKVSFSLEKTDGRVILA----EFETFYLLNTYAPNNGWKEEENSFQRR 191 (360)
Q Consensus 118 ~~~~gy~~~~~~~~~-~~~Gvailsr~p-i~~~~v~~~~~~~~~r~l~v----~~~~l~v~nvh~~~~~~~~~~~~~~~r 191 (360)
..|.++...... +..+++++||.+ +........+...-++++++ +..++.++++|..+.....+ ++|
T Consensus 136 ---~~yP~~~~~~~~~~~~~~a~~sr~~~~~~~~~e~~~~~pk~~~~t~~~~~~g~~l~v~~lh~~~~~~~~~----~~~ 208 (309)
T COG3021 136 ---AQYPAFILCQHPTGVFTLAILSRRPCCPLTEAEPWLRLPKSALATAYPLPDGTELTVVALHAVNFPVGTD----PQR 208 (309)
T ss_pred ---HhCCceeecCCCCCeeeeeeccccccccccccCccccCCccceeEEEEcCCCCEEEEEeeccccccCCcc----HHH
Confidence 356545443333 567889999885 21111111111123344443 23479999999986555433 234
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEccccccCcc
Q 018111 192 RKWDKRIQEFVLQCSGKPLIWCGDLNVSHEE 222 (360)
Q Consensus 192 ~~~l~~l~~~l~~~~~~p~Il~GDFN~~~~~ 222 (360)
+++.+|.+.+.. ...|+|++||||+.|.+
T Consensus 209 -~ql~~l~~~i~~-~~gpvIlaGDfNa~pWS 237 (309)
T COG3021 209 -AQLLELGDQIAG-HSGPVILAGDFNAPPWS 237 (309)
T ss_pred -HHHHHHHHHHHc-CCCCeEEeecCCCcchh
Confidence 567777777743 45999999999998865
No 18
>KOG2338 consensus Transcriptional effector CCR4-related protein [Transcription]
Probab=99.54 E-value=2.1e-13 Score=132.73 Aligned_cols=154 Identities=21% Similarity=0.234 Sum_probs=96.9
Q ss_pred CCeEEEEEeCc--cc--------------hhhhcCCchhHHHHHhhcCCCEEEEeeeecCCCCCCCCCccccccchhhhh
Q 018111 40 DPLKFVTWNAN--SL--------------LLRVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKA 103 (360)
Q Consensus 40 ~~lrI~s~Ni~--g~--------------~~~~~~~~~~l~~~i~~~~pDIi~LQEv~~~~~~~~~~~~~~~~l~~~~~~ 103 (360)
-.++|+||||- .+ ...+..|...|+..|...+|||+|||||..+... +
T Consensus 115 f~ftvmSYNILAQ~l~~~~~r~~~~~s~~~L~W~~R~~~Ll~EL~~~dpDIlCLQEVq~d~~~--------~-------- 178 (495)
T KOG2338|consen 115 FDFTVMSYNILAQDLLRDIRRLYFPESGPALKWLRRSQNLLNELKHYDPDVLCLQEVQEDHYP--------E-------- 178 (495)
T ss_pred cceEEEEehHhHHHHHHHhHHhhccCChhhcchhHHhHHHHHHHhhcCCCeeeehhhhhhhhH--------H--------
Confidence 48999999992 22 0112335578999999999999999999877430 1
Q ss_pred hHHHHHHHHHhhCCCCCCCceEEEecCC-CCceeEEEEEeecC-C---CceeeccCC-------CCcccEEEEEcC----
Q 018111 104 SREEKLILMRALSSPPFKNYQIWWSLAD-SKYAGTALLVKKCF-Q---PKKVSFSLE-------KTDGRVILAEFE---- 167 (360)
Q Consensus 104 ~~~~~~~~~~~l~~~~~~gy~~~~~~~~-~~~~Gvailsr~pi-~---~~~v~~~~~-------~~~~r~l~v~~~---- 167 (360)
+.+.++.. .||..++.... .+..|++|+.+... . ...+.+... +..+.++..++.
T Consensus 179 ---~~~~~~~~------lGy~~~~~r~t~~KthG~ai~w~~~~F~lv~~~~l~y~~~~~~l~n~~NV~lvv~l~f~~~~~ 249 (495)
T KOG2338|consen 179 ---FWQPLLGK------LGYTGFFKRRTGTKTHGVAILWHSAKFKLVNHSELNYFDSGSALANRDNVGLVVSLEFRLVDE 249 (495)
T ss_pred ---HHHHHHhh------cCceEEEEeccCCCCceEEEEEecccceecccchhhcccccchhhcccceeEEEEEEecccCc
Confidence 22222222 58876655443 45679999998752 0 011111100 033445555551
Q ss_pred ---cEEEEEEEcCCCCCccchhhHHHHHHHHHHHHHHHHhc-----CCCCEEEEccccccCccc
Q 018111 168 ---TFYLLNTYAPNNGWKEEENSFQRRRKWDKRIQEFVLQC-----SGKPLIWCGDLNVSHEEI 223 (360)
Q Consensus 168 ---~l~v~nvh~~~~~~~~~~~~~~~r~~~l~~l~~~l~~~-----~~~p~Il~GDFN~~~~~~ 223 (360)
++.|+|+|+-......+ .|..+...|...+++. ...|+++|||||+.|++.
T Consensus 250 ~sq~ilVanTHLl~np~~~~-----vrL~Q~~iiL~~~~~~~~~~~~~~pi~l~GDfNt~p~~~ 308 (495)
T KOG2338|consen 250 SSQGILVANTHLLFNPSRSD-----VRLAQVYIILAELEKMSKSSKSHWPIFLCGDFNTEPDSP 308 (495)
T ss_pred ccCceEEEeeeeeecCcccc-----hhhHHHHHHHHHHHHHHhhcccCCCeEEecCCCCCCCCC
Confidence 79999999988866543 2455555555555432 255999999999999873
No 19
>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B.
Probab=99.26 E-value=2.6e-11 Score=98.62 Aligned_cols=119 Identities=23% Similarity=0.381 Sum_probs=63.2
Q ss_pred EEEEEEEcCCCCCccchhhHHHHHHHHHHHHHHHHhcCCCCEEEEccccccCccccCcChhhhhhhhcCCCCCCCCCCCC
Q 018111 169 FYLLNTYAPNNGWKEEENSFQRRRKWDKRIQEFVLQCSGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWG 248 (360)
Q Consensus 169 l~v~nvh~~~~~~~~~~~~~~~r~~~l~~l~~~l~~~~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 248 (360)
|.|+|||.|+.. . +..+.+.|.+++......++||+||||+.....+..
T Consensus 1 i~i~~vY~pp~~-~--------~~~~~~~l~~~~~~~~~~~~Ii~GDFN~~~~~w~~~---------------------- 49 (119)
T PF14529_consen 1 ITIISVYAPPSS-E--------REEFFDQLRQLLKNLPPAPIIIGGDFNAHHPNWDSS---------------------- 49 (119)
T ss_dssp EEEEEEE--TTS----------CHHHHHHHHHHHHCCTTSSEEEEEE-----GGGT-S----------------------
T ss_pred CEEEEEECCCCc-c--------HHHHHHHHHHHHHhCCCCCEEEEeECCCCchhhhhc----------------------
Confidence 579999999988 1 233467777777655444999999999954432111
Q ss_pred CCCCCHHHHHHHHhhhhcCCeeeeeeccccCCCCCcceeccCCCCCcccCccceeEEEEeChhhhhhheeeEeccCcccc
Q 018111 249 QPGFTIAERKRFGAILKEGRLIDAYRFLHKEKDMDCGFSWSGNPIGKYRGKRMRIDYFIVSEELKDRIIACEMQGHGIEL 328 (360)
Q Consensus 249 ~~~~~~~~~~~~~~~l~~~~l~D~~r~~~~~~~~~~~~T~~~~~~~~~~~~~~rID~I~~s~~l~~~v~~~~i~~~~~~~ 328 (360)
.........+..++...+|.+... .. ..+||..... ..+||+||++..+... ....+..
T Consensus 50 --~~~~~~~~~l~~~~~~~~l~~~~~----~~---~~~T~~~~~~------~s~iD~~~~s~~~~~~-~~~~~~~----- 108 (119)
T PF14529_consen 50 --NTNSRRGEQLLDWLDSHNLVDLNP----PG---RPPTFISNSH------GSRIDLILTSDNLLSW-CVWVISS----- 108 (119)
T ss_dssp --CHHHHHHHHHHHHHHHCTEEE-------TT------SEEECCC------EE--EEEEEECCGCCC-EEEEEET-----
T ss_pred --cccchhHHHHHHHhhhceeeeeec----CC---CCCcccCCCC------CceEEEEEECChHHhc-CcEEEeC-----
Confidence 111023455667777766877622 11 3477754322 4799999999998765 2223222
Q ss_pred CCCCCCCccceE
Q 018111 329 EGFYGSDHCPVS 340 (360)
Q Consensus 329 ~~~~~SDH~PV~ 340 (360)
....|||+||+
T Consensus 109 -~~~~SDH~~I~ 119 (119)
T PF14529_consen 109 -DDSGSDHCPIT 119 (119)
T ss_dssp -TSSSSSB--EE
T ss_pred -CCCCCCccCCC
Confidence 24789999985
No 20
>COG5239 CCR4 mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification]
Probab=99.07 E-value=3.3e-09 Score=99.82 Aligned_cols=44 Identities=18% Similarity=0.250 Sum_probs=33.0
Q ss_pred CeEEEEEeCccc-------------hhhhcCCchhHHHHHhhcCCCEEEEeeeecCC
Q 018111 41 PLKFVTWNANSL-------------LLRVKNNWPEFSNFITTFDPDVIALQEVRMPA 84 (360)
Q Consensus 41 ~lrI~s~Ni~g~-------------~~~~~~~~~~l~~~i~~~~pDIi~LQEv~~~~ 84 (360)
.++|+|||+-.. .-.+..|...|.+.|...+|||+||||+....
T Consensus 30 ~ftimTYN~Laq~y~~r~~y~~s~~aL~W~~R~~~L~~EL~~Yn~Di~CLQEvd~~~ 86 (378)
T COG5239 30 DFTIMTYNVLAQTYATRKMYPYSGWALKWSYRSRLLLQELLYYNADILCLQEVDAED 86 (378)
T ss_pred eeEEEehhhhhhhhccccccCCchhhhhhHHHHHHHHHHHhccCCceeeeehhhhhH
Confidence 799999999211 11123344779999999999999999997653
No 21
>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues. Mg(2+)-dependent/Li(+)-sensitive enzymes.
Probab=98.96 E-value=4.4e-08 Score=93.58 Aligned_cols=162 Identities=17% Similarity=0.203 Sum_probs=84.5
Q ss_pred CeEEEEEeCccchhhhcCCchhHHHHHhh-------cCCCE--EEEeeee-cCCCCCCCCCccccccchhhhhhHHHHHH
Q 018111 41 PLKFVTWNANSLLLRVKNNWPEFSNFITT-------FDPDV--IALQEVR-MPAAGSKDAPKNHQELKDDTKASREEKLI 110 (360)
Q Consensus 41 ~lrI~s~Ni~g~~~~~~~~~~~l~~~i~~-------~~pDI--i~LQEv~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 110 (360)
.+-|+||||++...... ..+..+|.. ..||| |+|||+. .......... ......-...
T Consensus 4 ~v~v~TwNv~~~~~~p~---~~l~~~l~~~~~~~~~~~pDI~viglQEi~~~~~~~~~~~~---------~~~~~~W~~~ 71 (310)
T smart00128 4 KVLVGTWNVGGLKADPK---VDVTSWLFQKIDVKQSEKPDIYVIGLQEVVDLENGVLLETI---------AGKERLWSKL 71 (310)
T ss_pred EEEEEEEECCCccCCCh---hhHHHhhccccccccCCCCCEEEEEeeeecccchhhhhhcc---------chhHHHHHHH
Confidence 46799999988641111 357777765 67999 7799993 2111110000 0000011122
Q ss_pred HHHhhCCCCCCCceEEEecCCCCceeEEEEEeecCCC-c-e-----eeccCCC----CcccEEEEEcC--cEEEEEEEcC
Q 018111 111 LMRALSSPPFKNYQIWWSLADSKYAGTALLVKKCFQP-K-K-----VSFSLEK----TDGRVILAEFE--TFYLLNTYAP 177 (360)
Q Consensus 111 ~~~~l~~~~~~gy~~~~~~~~~~~~Gvailsr~pi~~-~-~-----v~~~~~~----~~~r~l~v~~~--~l~v~nvh~~ 177 (360)
+...|.. ...|..... ..-+.-++.|++|..+.+ + . +...+.. ..+..+.+.+. .+.++|+|++
T Consensus 72 i~~~l~~--~~~Y~~v~~-~~l~gi~l~vf~~~~~~~~i~~v~~~~v~~G~~~~~~nKG~v~i~~~~~~~~~~fv~~HL~ 148 (310)
T smart00128 72 IESSLNG--DGQYNVLAK-VRLVGILVLVFVKANHLVYIKDVETFTVKTGMGGLWGNKGAVAVRFKLSDTSFCFVNSHLA 148 (310)
T ss_pred HHHhcCC--CCceEEEee-eeecceEEEEEEehhhcCccceeEeeeeeccccceeecCceEEEEEEEcCcEEEEEeeccc
Confidence 3334321 134543333 222344578888887531 1 1 1112111 22334455554 5999999999
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHHHh--------cCCCCEEEEccccccCcc
Q 018111 178 NNGWKEEENSFQRRRKWDKRIQEFVLQ--------CSGKPLIWCGDLNVSHEE 222 (360)
Q Consensus 178 ~~~~~~~~~~~~~r~~~l~~l~~~l~~--------~~~~p~Il~GDFN~~~~~ 222 (360)
++... ...|.+.+..+...+.- .....+|++||||-.-+.
T Consensus 149 a~~~~-----~~~R~~~~~~I~~~~~f~~~~~~~~~~~d~~f~~GDlNyRi~~ 196 (310)
T smart00128 149 AGASN-----VEQRNQDYKTILRALSFPERAELSQFDHDVVFWFGDLNFRLDS 196 (310)
T ss_pred cccch-----hhhhHHHHHHHHHhcCCCCCccccccccceEEEecCcceeecC
Confidence 97753 33454445555444321 135789999999986553
No 22
>COG2374 Predicted extracellular nuclease [General function prediction only]
Probab=98.83 E-value=7.9e-08 Score=98.08 Aligned_cols=250 Identities=19% Similarity=0.223 Sum_probs=136.4
Q ss_pred CCCCCCeEEEEEeCcc-ch----------hh-----------hcCCchhHHHHHhhcCCCEEEEeeeecCCCCCCCCCcc
Q 018111 36 NSKKDPLKFVTWNANS-LL----------LR-----------VKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKN 93 (360)
Q Consensus 36 ~~~~~~lrI~s~Ni~g-~~----------~~-----------~~~~~~~l~~~i~~~~pDIi~LQEv~~~~~~~~~~~~~ 93 (360)
.-....|||.+|||.+ +. .. ..+.+..++..|..+++||+.|-|+......--. .
T Consensus 458 ~~v~G~LkiasfNVlNyf~~~~~~g~~~~~~~d~rga~~~~e~~~Q~~k~v~ai~~ldaDV~GL~Eien~~~~~~s--~- 534 (798)
T COG2374 458 PDVGGSLKIASFNVLNYFNKLSGDGGGASTFSDCRGANTTEEFARQRAKIVTAILTLDADVLGLMEIENNGYGTDS--G- 534 (798)
T ss_pred cccCceeeeeeeehhhhhccCCCCCCCccccccccCccchhHHHHHHHHHHHHHhhcchhhheeeeeeccCCCCCc--H-
Confidence 3455679999999932 21 00 0111356999999999999999999866321100 0
Q ss_pred ccccchhhhhhHHHHHHHHHhhCCCCCCC-ceEEEecCCC-C----ceeEEEEEeecCCCceeecc----C---------
Q 018111 94 HQELKDDTKASREEKLILMRALSSPPFKN-YQIWWSLADS-K----YAGTALLVKKCFQPKKVSFS----L--------- 154 (360)
Q Consensus 94 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~g-y~~~~~~~~~-~----~~Gvailsr~pi~~~~v~~~----~--------- 154 (360)
.++ .-++.+|......+ -+.++..... + ..+++++.|.. .+... +
T Consensus 535 -~ai-----------~~lV~~lna~~G~~~~y~~v~p~~~~~lgtD~I~vg~iY~~~----~V~~~g~~~~~~~~a~~~v 598 (798)
T COG2374 535 -DAI-----------AQLVNALNAKAGAGTRYAFVAPGRNGGLGTDAIRVGFIYKPS----AVSLVGKAAIVDNDAFLGV 598 (798)
T ss_pred -HHH-----------HHHHHHHHhhcCCCceEEEEecCccCCcCCCceeEEEEeccc----eEEeccccccccccccccc
Confidence 011 22345554444444 2222222222 1 44577776653 11110 0
Q ss_pred ---CCCcccEEEE-Ec------CcEEEEEEEcCCCCCccc---------hhhHHHHHHHHHHHHHHHHhc----CCCCEE
Q 018111 155 ---EKTDGRVILA-EF------ETFYLLNTYAPNNGWKEE---------ENSFQRRRKWDKRIQEFVLQC----SGKPLI 211 (360)
Q Consensus 155 ---~~~~~r~l~v-~~------~~l~v~nvh~~~~~~~~~---------~~~~~~r~~~l~~l~~~l~~~----~~~p~I 211 (360)
++...|.-.+ .+ ..+.++.-|+.+..+..- ...-..|.+.+.+|..++... .+.+++
T Consensus 599 ~~~~~~n~R~~laqtF~~~~~~ekfvvVvNHfkSKgs~~p~~gd~~dgQg~~~~~R~~~AqaL~~~la~~~~~~~d~~~v 678 (798)
T COG2374 599 GEIDDNNARPPLAQTFQDLSGGEKFVVVVNHFKSKGSDCPVDGDTQDGQGNSNQTRVRAAQALAAFLATNPTGKADADIV 678 (798)
T ss_pred ccccccccCcchhhhhhhccCCcEEEEEEeeecccCCCCCCcccccccccchhhHHHHHHHHHHHHHhhCcccccCCCEE
Confidence 0011121111 11 257777778877554421 011234677788899998752 478999
Q ss_pred EEccccccCccccCcChhhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHHHhhhhcCCeeeeeeccccCCCCCcceeccCC
Q 018111 212 WCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIAERKRFGAILKEGRLIDAYRFLHKEKDMDCGFSWSGN 291 (360)
Q Consensus 212 l~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~D~~r~~~~~~~~~~~~T~~~~ 291 (360)
|+||||+...+.-+ + .++..++...-..+++.. .+|||.-
T Consensus 679 iLGD~N~y~~edpI-----------------------------------~-~l~~aGy~~l~~~~~~~~---~~YSY~f- 718 (798)
T COG2374 679 ILGDFNDYAFEDPI-----------------------------------Q-ALEGAGYMNLAARFHDAG---DRYSYVF- 718 (798)
T ss_pred EEeccchhhhccHH-----------------------------------H-HHhhcCchhhhhhccCCC---CceEEEE-
Confidence 99999997654211 1 222222333333333322 3566531
Q ss_pred CCCcccCccceeEEEEeChhhhhhheeeEecc-Cccc--------------------cCCCCCCCccceEEeeecCCCc
Q 018111 292 PIGKYRGKRMRIDYFIVSEELKDRIIACEMQG-HGIE--------------------LEGFYGSDHCPVSLELSEASSD 349 (360)
Q Consensus 292 ~~~~~~~~~~rID~I~~s~~l~~~v~~~~i~~-~~~~--------------------~~~~~~SDH~PV~v~l~~~~~~ 349 (360)
.+.-..+||+|+|.++..++..+.... +..+ ......|||-||++.|.+....
T Consensus 719 -----~G~~gtLDhaLas~sl~~~v~~a~ewHINAdE~~~ldYn~~Fk~q~~~~~~~~~~fR~SDHDPvvvglnL~~~a 792 (798)
T COG2374 719 -----NGQSGTLDHALASASLAAQVSGATEWHINADEPDALDYNLEFKGQNVSLYKTTNPFRASDHDPVVVGLNLLGTA 792 (798)
T ss_pred -----CCccchHhhhhhhhhhhhhccCceeeeecccccchhhhhhhhccccccccccCCccccCCCCCeEEEEEecccc
Confidence 122258999999999987765543321 1100 1234689999999999987643
No 23
>KOG0620 consensus Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins [Transcription]
Probab=98.71 E-value=5.9e-08 Score=93.87 Aligned_cols=40 Identities=23% Similarity=0.327 Sum_probs=29.5
Q ss_pred CeEEEEEeCccchhh--------------hcCCchhHHHHHhhcCCCEEEEeee
Q 018111 41 PLKFVTWNANSLLLR--------------VKNNWPEFSNFITTFDPDVIALQEV 80 (360)
Q Consensus 41 ~lrI~s~Ni~g~~~~--------------~~~~~~~l~~~i~~~~pDIi~LQEv 80 (360)
.++|+|||+-..... +..|+..+.+.|...+||++||||+
T Consensus 19 ~~~v~s~n~l~~~~~~~~~~~~~~~~~~~w~~r~~~~~~ei~~~~ad~icLqev 72 (361)
T KOG0620|consen 19 TFTVLSYNILSQLYATSKLYMYCPSWALSWEYRRQLLLEEILNYNADILCLQEV 72 (361)
T ss_pred eEEeechhhhhhhhcccCCCcccchhhccHHHHHHHHHHHHhCCCcceeecchh
Confidence 899999999422111 1123366888888999999999999
No 24
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.03 E-value=5e-05 Score=79.45 Aligned_cols=158 Identities=18% Similarity=0.249 Sum_probs=78.8
Q ss_pred CeEEEEEeCccchhhhcCCchhHHHHHhhc-------CCCE--EEEeeeecC-CCCCCCCCc-cccccchhhhhhHHHHH
Q 018111 41 PLKFVTWNANSLLLRVKNNWPEFSNFITTF-------DPDV--IALQEVRMP-AAGSKDAPK-NHQELKDDTKASREEKL 109 (360)
Q Consensus 41 ~lrI~s~Ni~g~~~~~~~~~~~l~~~i~~~-------~pDI--i~LQEv~~~-~~~~~~~~~-~~~~l~~~~~~~~~~~~ 109 (360)
.+=|.|||+||.....+ ..|.+||--. -+|| |+|||+-.- ..++..+.. ...-| |.+
T Consensus 538 ~IfvgTfNvNG~s~~~k---~~L~~WLfp~s~~~~~~~aDIyviG~eEvVeLnag~iv~As~tk~~~W---------ee~ 605 (1080)
T KOG0566|consen 538 SIFVGTFNVNGRSAAFK---DDLSDWLFPISRGKEFSPADIYVIGFEEVVELNAGNIVSASTTKRRFW---------EEK 605 (1080)
T ss_pred EEEEEeeeccCccccch---hhHHhhccccccCCcCCcCcEEEEeehhhhhcCccceeccChHHHHHH---------HHH
Confidence 45677899999433332 4677777644 3775 678998422 221111111 11111 212
Q ss_pred HHHHhhCCCCCCCceEEEecCCCCceeEEE--EEeecCCC-------ceeeccCCC--CcccEEEEEcC----cEEEEEE
Q 018111 110 ILMRALSSPPFKNYQIWWSLADSKYAGTAL--LVKKCFQP-------KKVSFSLEK--TDGRVILAEFE----TFYLLNT 174 (360)
Q Consensus 110 ~~~~~l~~~~~~gy~~~~~~~~~~~~Gvai--lsr~pi~~-------~~v~~~~~~--~~~r~l~v~~~----~l~v~nv 174 (360)
+ .+.|++. ..+|-.. ......||++ |+|..-.| ..+..++++ .....+.+.+. .+-+++.
T Consensus 606 i-~~~Ln~~-~~kYvlL---~s~QlvGv~L~iF~r~~~~p~Ik~V~~~tkKTGfGG~tgNKGAVAIrf~~~~TsfCFv~S 680 (1080)
T KOG0566|consen 606 I-LKTLNRY-KNKYVLL---RSEQLVGVCLLLFIRPDHAPYIKDVAGDTKKTGFGGATGNKGAVAIRFVYHATSFCFVCS 680 (1080)
T ss_pred H-HHHhcCC-CCceEEE---ehhhhheeeEEEEEcccccchhhhcccceeecccccccCCCceEEEEEEeccccEEEEec
Confidence 2 3445432 1333322 2334566654 45543110 011123333 12223444432 6889999
Q ss_pred EcCCCCCccchhhHHHHHHHHHHHHHHHHhc------CCCCEEEEccccccC
Q 018111 175 YAPNNGWKEEENSFQRRRKWDKRIQEFVLQC------SGKPLIWCGDLNVSH 220 (360)
Q Consensus 175 h~~~~~~~~~~~~~~~r~~~l~~l~~~l~~~------~~~p~Il~GDFN~~~ 220 (360)
|+.++.... .+|..-...|.+-|.-. ...-++.|||||-.-
T Consensus 681 HlAAG~snv-----~ERn~DY~tI~r~l~Fp~Gr~I~~HD~ifW~GDFNYRI 727 (1080)
T KOG0566|consen 681 HLAAGQSNV-----EERNEDYKTIARKLRFPRGRMIFSHDYIFWLGDFNYRI 727 (1080)
T ss_pred ccccccchH-----hhhhhhHHHHHHhccccCCccccCCceEEEecccceee
Confidence 999888653 23433344555544321 345689999999743
No 25
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional
Probab=95.98 E-value=0.058 Score=55.29 Aligned_cols=37 Identities=32% Similarity=0.566 Sum_probs=25.4
Q ss_pred CeEEEEEeCccchhhhcCCchhHHHHHhhcCC-CE--EEEeee
Q 018111 41 PLKFVTWNANSLLLRVKNNWPEFSNFITTFDP-DV--IALQEV 80 (360)
Q Consensus 41 ~lrI~s~Ni~g~~~~~~~~~~~l~~~i~~~~p-DI--i~LQEv 80 (360)
.+-|+||||.|...... -.+..||...+| || |+|||+
T Consensus 109 rv~v~TWNV~g~~p~~~---l~l~~wl~~~~p~DiyviG~QE~ 148 (621)
T PLN03191 109 RVTIGTWNVAGRLPSED---LEIEDWLSTEEPADIYIIGFQEV 148 (621)
T ss_pred EEEEEEeecCCCCCccc---CCHHHhccCCCCCCEEEEeeEEe
Confidence 35678999988754332 257888876554 75 678998
No 26
>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms]
Probab=95.83 E-value=0.013 Score=57.27 Aligned_cols=49 Identities=18% Similarity=0.250 Sum_probs=31.7
Q ss_pred cEEEEEEEcCCCCCccchhhHHHHHHHHHHHHHHHHhc------CCCCEEEEccccccCc
Q 018111 168 TFYLLNTYAPNNGWKEEENSFQRRRKWDKRIQEFVLQC------SGKPLIWCGDLNVSHE 221 (360)
Q Consensus 168 ~l~v~nvh~~~~~~~~~~~~~~~r~~~l~~l~~~l~~~------~~~p~Il~GDFN~~~~ 221 (360)
.+.++|.|+.++... +.+|..-.+.+..-+... ....++++||||-.-.
T Consensus 166 ~~cFv~shlaag~~N-----~eeR~~Dy~~I~~~i~f~~g~~I~~hdti~w~GDlNyRVt 220 (460)
T COG5411 166 SFCFVNSHLAAGVNN-----IEERIFDYRSIASNICFSRGLRIYDHDTIFWLGDLNYRVT 220 (460)
T ss_pred CcEEEecchhccccc-----HHHHHHHHHHHHHheecCCCceecccceEEEecccCceee
Confidence 688999999888754 334544445555544322 3456999999996433
No 27
>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional
Probab=88.05 E-value=1.3 Score=41.71 Aligned_cols=55 Identities=18% Similarity=0.117 Sum_probs=34.1
Q ss_pred cEEEEEEEcCCCCCccchh------hHHHHHHHHHHHHHHHHh--cCCCCEEEEccccccCcc
Q 018111 168 TFYLLNTYAPNNGWKEEEN------SFQRRRKWDKRIQEFVLQ--CSGKPLIWCGDLNVSHEE 222 (360)
Q Consensus 168 ~l~v~nvh~~~~~~~~~~~------~~~~r~~~l~~l~~~l~~--~~~~p~Il~GDFN~~~~~ 222 (360)
.+.++|+|+-+..+..+.. -...|.+-+..+...+.. ....++++.||||-..+.
T Consensus 81 ~fdfVNiHLFHDaSNl~A~~tSPSiYS~~RqrAL~~iL~r~~~~~~~~~~lF~fGDfNyRld~ 143 (356)
T PTZ00312 81 VVNVLNVHLYNDDDNRVAAASSPSLYTGQRQEALLEAIAECSAFISPSDPLFIFGDFNVRLDG 143 (356)
T ss_pred EEEEEEeeccCCcchhhHHhcCCchhHHHHHHHHHHHHHHHhhccCCCCcEEEeccceeeecc
Confidence 5899999999887654311 112233333333333333 267899999999986654
No 28
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional
Probab=66.01 E-value=5.9 Score=41.04 Aligned_cols=48 Identities=21% Similarity=0.070 Sum_probs=28.4
Q ss_pred cceeEEEEeChhhhhhheeeEeccCccccCCCCCCCccceEEeeecCC--CchhHHhh
Q 018111 300 RMRIDYFIVSEELKDRIIACEMQGHGIELEGFYGSDHCPVSLELSEAS--SDSEKREK 355 (360)
Q Consensus 300 ~~rID~I~~s~~l~~~v~~~~i~~~~~~~~~~~~SDH~PV~v~l~~~~--~~~~~~~~ 355 (360)
..-+|+|+....- +....... .....|||.||.+.|.+.. ..+.+.|+
T Consensus 554 PSWCDRILykg~~---i~~l~Y~s-----~ei~~SDHRPV~A~F~v~V~~id~~k~q~ 603 (621)
T PLN03191 554 PAWCDRILWLGKG---IKQLCYKR-----SEIRLSDHRPVSSMFLVEVEVFDHRKLQR 603 (621)
T ss_pred cchhheEeecCCC---ceEeEecc-----CCcccCCchhcceEEEEEEEecCHHHHHh
Confidence 4569999986432 12111111 1357899999999887653 34444443
No 29
>KOG1294 consensus Apurinic/apyrimidinic endonuclease and related enzymes [Replication, recombination and repair]
Probab=54.48 E-value=69 Score=31.01 Aligned_cols=58 Identities=26% Similarity=0.463 Sum_probs=38.7
Q ss_pred CcccEEEEEcCcEEEEEEEcCCCCCccchhhHHHHHHHHHHHHHHHHhc--CCCCEEEEccccccCcc
Q 018111 157 TDGRVILAEFETFYLLNTYAPNNGWKEEENSFQRRRKWDKRIQEFVLQC--SGKPLIWCGDLNVSHEE 222 (360)
Q Consensus 157 ~~~r~l~v~~~~l~v~nvh~~~~~~~~~~~~~~~r~~~l~~l~~~l~~~--~~~p~Il~GDFN~~~~~ 222 (360)
.+++++..+...+.+.+||.+....... ..+..|+..+....+.. .+.++++ |..+..
T Consensus 11 ~~~~~~~~~k~~~~~~~v~~~~~~~e~~----~~~~~~~~~l~~r~~~~~~~g~~~~~----~i~~~~ 70 (335)
T KOG1294|consen 11 SEGRCVIVDKEMFVLINVYCPRNSPEIS----KRRLRFAKVLHYRVEKLLKQGNRKVL----NICPWD 70 (335)
T ss_pred ccCCeeeeecccccccceeccccCCcch----hhhhhhhhHHHHHHHHHHHhCCeeEe----ecCchh
Confidence 5788888888889999999998876532 12455555555555432 5667777 555544
No 30
>KOG1976 consensus Inositol polyphosphate 5-phosphatase, type I [Lipid transport and metabolism]
Probab=49.45 E-value=33 Score=32.56 Aligned_cols=58 Identities=10% Similarity=0.119 Sum_probs=35.9
Q ss_pred CcEEEEEEEcCCCCCccc-----hhhH-HHHHHHHHHHHHHHHhc--CCCCEEEEccccccCcccc
Q 018111 167 ETFYLLNTYAPNNGWKEE-----ENSF-QRRRKWDKRIQEFVLQC--SGKPLIWCGDLNVSHEEID 224 (360)
Q Consensus 167 ~~l~v~nvh~~~~~~~~~-----~~~~-~~r~~~l~~l~~~l~~~--~~~p~Il~GDFN~~~~~~d 224 (360)
..+.++|+|+-+..+... ...+ ..|.+.++-+.+.|.+. +..-+.+.||||...++.+
T Consensus 169 k~fdfVN~hLFhD~snla~~~sspt~ys~~R~~al~~vL~el~~~~~~~~~~fVfGdfNfrLds~s 234 (391)
T KOG1976|consen 169 KEFDFVNLHLFHDVSNLATKNSSPTKYSSKREQALEMVLKELDEEGLRNDAIFVFGDFNFRLDSTS 234 (391)
T ss_pred ceeeeeehhhhcchhhhhhhcCChhhhhhhHHHHHHHHHHHHHhhccCceEEEEecccccccchHH
Confidence 478999999865543211 1112 22445566666666432 4557889999999887743
No 31
>PLN02798 nitrilase
Probab=20.78 E-value=98 Score=28.81 Aligned_cols=19 Identities=11% Similarity=0.099 Sum_probs=13.9
Q ss_pred HHHHHhhcCCCEEEEeeee
Q 018111 63 FSNFITTFDPDVIALQEVR 81 (360)
Q Consensus 63 l~~~i~~~~pDIi~LQEv~ 81 (360)
+++.....++|||+++|..
T Consensus 34 ~i~~A~~~gadlvvfPE~~ 52 (286)
T PLN02798 34 LAKEAAAAGAKLLFLPECF 52 (286)
T ss_pred HHHHHHHCCCCEEEcCCCc
Confidence 3444446789999999973
No 32
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=20.10 E-value=1.2e+02 Score=23.84 Aligned_cols=20 Identities=20% Similarity=0.415 Sum_probs=15.2
Q ss_pred HHHHHHHHhcCCCCEEEEcc
Q 018111 196 KRIQEFVLQCSGKPLIWCGD 215 (360)
Q Consensus 196 ~~l~~~l~~~~~~p~Il~GD 215 (360)
..|...+...+..++||+||
T Consensus 53 ~~i~~i~~~fP~~kfiLIGD 72 (100)
T PF09949_consen 53 DNIERILRDFPERKFILIGD 72 (100)
T ss_pred HHHHHHHHHCCCCcEEEEee
Confidence 34555565668899999999
Done!