Query 018113
Match_columns 360
No_of_seqs 493 out of 1499
Neff 10.8
Searched_HMMs 46136
Date Fri Mar 29 06:15:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018113.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018113hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05631 DUF791: Protein of un 100.0 2.7E-34 5.9E-39 244.0 33.6 329 4-333 1-329 (354)
2 KOG4332 Predicted sugar transp 100.0 7.4E-31 1.6E-35 211.1 18.1 335 1-335 1-336 (454)
3 COG2814 AraJ Arabinose efflux 100.0 1.8E-26 4E-31 200.9 28.5 253 57-329 33-292 (394)
4 PRK10406 alpha-ketoglutarate t 100.0 8.1E-26 1.7E-30 207.3 29.2 265 38-312 19-310 (432)
5 TIGR02332 HpaX 4-hydroxyphenyl 99.9 3.7E-25 8.1E-30 201.4 29.6 265 37-312 4-310 (412)
6 COG2271 UhpC Sugar phosphate p 99.9 1.2E-25 2.5E-30 193.5 21.0 266 34-309 22-316 (448)
7 PRK03545 putative arabinose tr 99.9 2.4E-24 5.2E-29 195.1 28.4 237 57-312 29-272 (390)
8 PRK14995 methyl viologen resis 99.9 5.1E-24 1.1E-28 198.5 30.7 275 40-327 5-339 (495)
9 PRK10133 L-fucose transporter; 99.9 4.3E-24 9.3E-29 195.5 29.3 263 57-328 46-340 (438)
10 TIGR00891 2A0112 putative sial 99.9 3.4E-24 7.3E-29 195.1 27.6 267 35-312 6-305 (405)
11 TIGR00890 2A0111 Oxalate/Forma 99.9 1.5E-24 3.3E-29 195.3 23.7 257 57-328 23-285 (377)
12 PRK10642 proline/glycine betai 99.9 5.8E-24 1.3E-28 198.0 28.0 267 40-312 15-317 (490)
13 PRK15075 citrate-proton sympor 99.9 6.4E-24 1.4E-28 194.9 27.4 268 39-312 13-305 (434)
14 PRK09952 shikimate transporter 99.9 9E-24 1.9E-28 193.9 28.2 263 39-312 20-317 (438)
15 PRK09556 uhpT sugar phosphate 99.9 1.8E-24 3.8E-29 200.4 23.3 268 35-312 23-325 (467)
16 PRK10213 nepI ribonucleoside t 99.9 2.5E-23 5.4E-28 188.3 29.7 235 57-311 40-282 (394)
17 TIGR00710 efflux_Bcr_CflA drug 99.9 1.3E-23 2.8E-28 190.0 27.4 242 57-312 25-273 (385)
18 PRK09705 cynX putative cyanate 99.9 1.6E-23 3.6E-28 189.6 27.6 237 57-312 29-271 (393)
19 TIGR00903 2A0129 major facilit 99.9 2.3E-23 4.9E-28 186.2 27.9 237 57-311 11-253 (368)
20 PLN00028 nitrate transmembrane 99.9 2.6E-23 5.7E-28 192.6 28.7 247 57-311 56-318 (476)
21 PRK11551 putative 3-hydroxyphe 99.9 3.8E-23 8.2E-28 188.4 28.4 261 36-312 10-286 (406)
22 TIGR00900 2A0121 H+ Antiporter 99.9 3.8E-23 8.1E-28 185.5 28.0 259 43-312 5-278 (365)
23 PRK10091 MFS transport protein 99.9 3E-23 6.6E-28 187.3 26.9 249 45-312 11-266 (382)
24 PRK15402 multidrug efflux syst 99.9 6.1E-23 1.3E-27 187.0 28.9 243 57-312 33-282 (406)
25 PRK11663 regulatory protein Uh 99.9 2.4E-23 5.2E-28 191.0 26.1 260 38-309 20-307 (434)
26 PRK12307 putative sialic acid 99.9 8E-23 1.7E-27 187.5 29.1 263 37-312 14-297 (426)
27 PRK11102 bicyclomycin/multidru 99.9 3.8E-23 8.3E-28 186.5 26.0 247 54-312 8-261 (377)
28 TIGR00886 2A0108 nitrite extru 99.9 8.8E-23 1.9E-27 183.4 27.3 255 49-312 12-292 (366)
29 PRK03699 putative transporter; 99.9 7.7E-23 1.7E-27 185.5 26.9 254 41-312 7-272 (394)
30 PRK15403 multidrug efflux syst 99.9 3.1E-22 6.7E-27 182.3 30.4 241 57-310 36-283 (413)
31 TIGR00711 efflux_EmrB drug res 99.9 4.3E-23 9.3E-28 192.5 25.1 258 57-328 22-336 (485)
32 PF07690 MFS_1: Major Facilita 99.9 2E-23 4.2E-28 186.4 20.3 254 47-312 6-274 (352)
33 PRK10473 multidrug efflux syst 99.9 3.8E-22 8.2E-27 181.0 28.7 241 57-312 23-270 (392)
34 TIGR00897 2A0118 polyol permea 99.9 6.2E-22 1.3E-26 180.0 29.0 265 35-312 11-288 (402)
35 PRK15034 nitrate/nitrite trans 99.9 7E-22 1.5E-26 178.2 28.4 264 46-326 42-329 (462)
36 TIGR00896 CynX cyanate transpo 99.9 2E-22 4.2E-27 180.4 23.9 250 57-325 20-275 (355)
37 TIGR01299 synapt_SV2 synaptic 99.9 4.2E-22 9.1E-27 189.9 26.6 133 35-168 161-301 (742)
38 TIGR00893 2A0114 d-galactonate 99.9 2E-22 4.3E-27 182.6 23.5 244 57-312 14-282 (399)
39 TIGR00885 fucP L-fucose:H+ sym 99.9 1.6E-21 3.4E-26 177.1 29.0 270 51-332 17-318 (410)
40 COG2223 NarK Nitrate/nitrite t 99.9 3.5E-22 7.6E-27 172.4 21.8 274 45-335 21-306 (417)
41 PRK11273 glpT sn-glycerol-3-ph 99.9 1.1E-21 2.4E-26 181.0 26.2 264 35-310 23-318 (452)
42 TIGR00899 2A0120 sugar efflux 99.9 1.9E-21 4.1E-26 175.3 26.9 255 45-312 5-266 (375)
43 PRK12382 putative transporter; 99.9 4.3E-21 9.4E-26 174.1 29.2 263 39-326 17-292 (392)
44 PRK09874 drug efflux system pr 99.9 3.7E-21 7.9E-26 175.5 28.6 265 33-312 10-289 (408)
45 PRK11652 emrD multidrug resist 99.9 4.5E-21 9.7E-26 174.1 28.5 241 54-310 25-272 (394)
46 PRK03893 putative sialic acid 99.9 3.3E-21 7.1E-26 180.3 27.9 161 35-206 14-182 (496)
47 PRK03633 putative MFS family t 99.9 5.1E-21 1.1E-25 172.8 28.1 244 48-312 17-266 (381)
48 PRK05122 major facilitator sup 99.9 4.4E-21 9.5E-26 174.4 27.8 245 45-312 23-280 (399)
49 PRK10504 putative transporter; 99.9 2.3E-21 5.1E-26 180.1 26.4 256 57-326 30-340 (471)
50 TIGR00895 2A0115 benzoate tran 99.9 2.9E-21 6.4E-26 175.3 26.5 264 36-312 12-316 (398)
51 PRK15011 sugar efflux transpor 99.9 1E-20 2.2E-25 171.5 28.5 263 35-312 13-283 (393)
52 TIGR00894 2A0114euk Na(+)-depe 99.9 1.6E-21 3.4E-26 180.9 23.5 266 35-311 13-327 (465)
53 PRK11195 lysophospholipid tran 99.9 7.3E-21 1.6E-25 172.2 27.3 256 40-312 6-272 (393)
54 PRK10489 enterobactin exporter 99.9 2.1E-21 4.4E-26 177.6 23.7 269 42-326 22-302 (417)
55 TIGR00881 2A0104 phosphoglycer 99.9 1.6E-21 3.5E-26 175.7 22.2 243 57-311 15-282 (379)
56 PRK11043 putative transporter; 99.9 2.1E-20 4.6E-25 170.0 29.5 240 57-312 26-269 (401)
57 PRK10077 xylE D-xylose transpo 99.9 3.7E-20 7.9E-25 172.5 30.4 178 37-222 8-217 (479)
58 TIGR00902 2A0127 phenyl propri 99.9 1.6E-20 3.6E-25 169.5 27.1 266 45-327 12-284 (382)
59 PRK10054 putative transporter; 99.9 1.4E-20 3.1E-25 170.4 25.9 258 38-312 8-275 (395)
60 TIGR00887 2A0109 phosphate:H+ 99.9 2E-20 4.4E-25 174.9 27.6 186 31-222 6-227 (502)
61 TIGR00892 2A0113 monocarboxyla 99.9 1.3E-20 2.8E-25 173.7 25.7 267 29-308 7-303 (455)
62 PRK11646 multidrug resistance 99.9 6.3E-20 1.4E-24 166.5 29.5 253 41-311 14-274 (400)
63 TIGR00805 oat sodium-independe 99.9 1.7E-21 3.7E-26 185.0 18.7 263 57-326 53-412 (633)
64 TIGR00712 glpT glycerol-3-phos 99.9 3E-20 6.5E-25 170.8 25.9 262 38-311 24-317 (438)
65 KOG1330 Sugar transporter/spin 99.9 3.2E-22 6.8E-27 174.1 11.2 259 39-308 31-310 (493)
66 TIGR00901 2A0125 AmpG-related 99.9 1.5E-19 3.3E-24 161.8 27.2 255 57-326 8-288 (356)
67 TIGR00883 2A0106 metabolite-pr 99.9 4.6E-20 1E-24 167.1 24.1 246 59-312 15-286 (394)
68 PRK11128 putative 3-phenylprop 99.9 1.1E-19 2.4E-24 164.2 26.2 260 47-325 14-282 (382)
69 TIGR00879 SP MFS transporter, 99.9 9.7E-20 2.1E-24 169.3 23.9 255 57-326 48-362 (481)
70 KOG2532 Permease of the major 99.9 1E-19 2.2E-24 165.3 22.7 235 65-310 66-323 (466)
71 TIGR00882 2A0105 oligosacchari 99.9 3.3E-19 7.1E-24 162.0 25.3 260 40-312 5-285 (396)
72 TIGR00898 2A0119 cation transp 99.9 9.1E-20 2E-24 170.9 22.2 256 58-332 110-404 (505)
73 PRK11902 ampG muropeptide tran 99.9 1.4E-18 3.1E-23 158.0 28.7 248 51-312 13-277 (402)
74 COG0738 FucP Fucose permease [ 99.9 1.6E-18 3.4E-23 149.0 26.7 265 54-333 30-322 (422)
75 PRK11010 ampG muropeptide tran 99.8 1.9E-18 4E-23 160.6 28.5 246 53-312 28-290 (491)
76 PRK09528 lacY galactoside perm 99.8 1.5E-18 3.2E-23 158.9 23.8 261 39-312 12-293 (420)
77 cd06174 MFS The Major Facilita 99.8 3.2E-18 6.9E-23 152.6 24.9 239 53-331 15-260 (352)
78 TIGR00792 gph sugar (Glycoside 99.8 5.3E-18 1.1E-22 156.1 26.0 264 57-328 19-302 (437)
79 TIGR00806 rfc RFC reduced fola 99.8 3.3E-17 7.3E-22 145.6 27.9 237 58-308 46-325 (511)
80 KOG2533 Permease of the major 99.8 1.8E-18 3.9E-23 157.6 20.0 243 60-308 69-336 (495)
81 TIGR00889 2A0110 nucleoside tr 99.8 1.7E-17 3.6E-22 151.4 25.4 262 47-329 12-297 (418)
82 PRK06814 acylglycerophosphoeth 99.8 1.8E-17 3.8E-22 169.7 27.4 257 42-311 16-291 (1140)
83 PRK08633 2-acyl-glycerophospho 99.8 3.6E-17 7.8E-22 167.9 28.0 245 57-312 30-300 (1146)
84 PRK10207 dipeptide/tripeptide 99.8 1.1E-16 2.4E-21 148.2 27.5 139 59-205 37-180 (489)
85 PF05977 MFS_3: Transmembrane 99.8 1.9E-16 4E-21 146.5 28.2 276 41-328 14-299 (524)
86 PF06609 TRI12: Fungal trichot 99.8 3.5E-16 7.6E-21 144.5 28.5 257 57-325 64-392 (599)
87 KOG0254 Predicted transporter 99.8 7.1E-17 1.5E-21 151.1 23.2 245 73-330 90-376 (513)
88 KOG0569 Permease of the major 99.8 3.2E-16 6.9E-21 141.2 26.3 249 64-326 46-348 (485)
89 KOG3764 Vesicular amine transp 99.8 4.1E-18 8.9E-23 145.6 12.0 232 64-312 98-337 (464)
90 COG2807 CynX Cyanate permease 99.8 1.4E-15 3E-20 129.1 25.1 261 57-333 32-294 (395)
91 TIGR02718 sider_RhtX_FptX side 99.7 4.5E-15 9.7E-20 134.6 29.0 245 54-312 18-275 (390)
92 KOG2504 Monocarboxylate transp 99.7 7.2E-16 1.6E-20 142.0 21.4 266 35-312 40-364 (509)
93 TIGR00924 yjdL_sub1_fam amino 99.7 7.5E-15 1.6E-19 135.9 26.7 142 57-209 30-182 (475)
94 PRK09669 putative symporter Ya 99.7 2.1E-14 4.6E-19 132.4 27.6 247 57-312 29-295 (444)
95 PF13347 MFS_2: MFS/sugar tran 99.7 8.3E-16 1.8E-20 141.0 18.2 266 60-334 25-311 (428)
96 TIGR01301 GPH_sucrose GPH fami 99.7 6.4E-14 1.4E-18 127.7 30.1 280 50-332 17-355 (477)
97 PF03825 Nuc_H_symport: Nucleo 99.7 3.3E-14 7.1E-19 127.9 27.4 272 40-324 5-284 (400)
98 KOG0255 Synaptic vesicle trans 99.7 8.4E-15 1.8E-19 137.8 21.8 255 64-336 110-403 (521)
99 KOG0252 Inorganic phosphate tr 99.7 8.1E-17 1.7E-21 140.2 6.7 186 36-223 36-249 (538)
100 PRK09584 tppB putative tripept 99.7 3.7E-13 8.1E-18 125.4 30.7 142 57-206 41-188 (500)
101 PRK10429 melibiose:sodium symp 99.7 8.6E-14 1.9E-18 129.2 25.5 252 54-312 23-297 (473)
102 PRK09848 glucuronide transport 99.6 2.5E-13 5.5E-18 125.4 28.0 261 56-328 27-309 (448)
103 KOG0253 Synaptic vesicle trans 99.6 8.3E-14 1.8E-18 118.2 20.2 156 35-201 72-235 (528)
104 PTZ00207 hypothetical protein; 99.6 6.1E-14 1.3E-18 130.5 21.2 130 37-168 24-165 (591)
105 COG2211 MelB Na+/melibiose sym 99.6 6.5E-13 1.4E-17 118.9 26.8 271 56-334 31-323 (467)
106 PF01306 LacY_symp: LacY proto 99.6 2E-13 4.4E-18 120.9 22.1 270 40-324 10-300 (412)
107 KOG2563 Permease of the major 99.6 7.8E-13 1.7E-17 115.6 25.1 284 34-326 38-345 (480)
108 KOG2615 Permease of the major 99.6 6.9E-14 1.5E-18 119.3 18.1 109 73-187 69-181 (451)
109 TIGR00788 fbt folate/biopterin 99.6 2.2E-12 4.9E-17 119.2 25.5 257 58-327 47-332 (468)
110 PF00083 Sugar_tr: Sugar (and 99.6 2.5E-18 5.5E-23 158.9 -14.1 243 73-328 47-331 (451)
111 PRK11462 putative transporter; 99.6 7E-12 1.5E-16 115.8 28.6 244 57-312 29-294 (460)
112 TIGR00889 2A0110 nucleoside tr 99.5 1.9E-12 4.1E-17 118.2 21.4 161 57-225 228-408 (418)
113 TIGR01272 gluP glucose/galacto 99.5 1.5E-12 3.2E-17 113.8 16.9 194 120-327 6-222 (310)
114 PRK15462 dipeptide/tripeptide 99.5 8.6E-11 1.9E-15 107.9 28.4 138 58-206 30-176 (493)
115 PF11700 ATG22: Vacuole efflux 99.5 1.3E-10 2.8E-15 106.8 29.4 246 75-323 73-359 (477)
116 PRK15011 sugar efflux transpor 99.4 5.1E-11 1.1E-15 108.2 22.3 147 58-215 237-387 (393)
117 KOG2325 Predicted transporter/ 99.4 3.8E-11 8.3E-16 107.9 20.3 187 33-225 26-235 (488)
118 PRK09528 lacY galactoside perm 99.4 3.7E-11 8E-16 110.1 17.6 143 65-215 255-399 (420)
119 PRK10642 proline/glycine betai 99.4 1.9E-10 4.2E-15 107.4 22.2 157 57-224 270-434 (490)
120 TIGR00902 2A0127 phenyl propri 99.4 2.8E-10 6.1E-15 102.9 22.6 150 56-214 224-374 (382)
121 TIGR00899 2A0120 sugar efflux 99.3 3.3E-10 7.2E-15 102.1 21.8 143 62-215 225-370 (375)
122 PRK05122 major facilitator sup 99.3 3.3E-10 7.2E-15 103.1 22.0 146 57-215 236-385 (399)
123 PRK03633 putative MFS family t 99.3 6.6E-10 1.4E-14 100.5 23.4 146 57-212 220-365 (381)
124 PRK09952 shikimate transporter 99.3 4.4E-10 9.4E-15 103.5 22.1 150 58-215 271-429 (438)
125 PRK03545 putative arabinose tr 99.3 5.4E-10 1.2E-14 101.4 22.3 143 61-215 230-376 (390)
126 PRK03699 putative transporter; 99.3 4.7E-10 1E-14 101.9 21.5 144 57-211 225-372 (394)
127 COG2814 AraJ Arabinose efflux 99.3 7E-10 1.5E-14 97.6 21.4 203 2-216 163-383 (394)
128 TIGR00890 2A0111 Oxalate/Forma 99.3 2.7E-10 5.8E-15 102.5 19.3 142 58-210 226-373 (377)
129 PRK09705 cynX putative cyanate 99.3 7.9E-10 1.7E-14 100.4 22.4 157 57-225 225-387 (393)
130 PRK09874 drug efflux system pr 99.3 5.7E-10 1.2E-14 101.8 21.6 148 57-215 239-394 (408)
131 COG3104 PTR2 Dipeptide/tripept 99.3 9.5E-10 2.1E-14 98.2 21.5 154 54-215 39-202 (498)
132 PRK11128 putative 3-phenylprop 99.3 9.5E-10 2.1E-14 99.5 22.2 149 57-214 225-374 (382)
133 PRK10489 enterobactin exporter 99.3 9.3E-10 2E-14 100.8 22.1 155 58-223 244-403 (417)
134 PRK11551 putative 3-hydroxyphe 99.3 8.6E-10 1.9E-14 100.6 21.2 148 58-215 241-392 (406)
135 KOG3626 Organic anion transpor 99.3 2E-10 4.4E-15 107.6 16.6 268 41-312 97-460 (735)
136 COG2270 Permeases of the major 99.3 1.6E-09 3.4E-14 94.8 20.7 252 74-333 60-338 (438)
137 PF03137 OATP: Organic Anion T 99.2 7.2E-13 1.6E-17 123.3 -0.9 264 55-324 21-385 (539)
138 PF03209 PUCC: PUCC protein; 99.2 8.9E-09 1.9E-13 90.2 23.6 257 63-333 6-295 (403)
139 PRK15075 citrate-proton sympor 99.2 1.4E-09 3E-14 100.1 19.7 134 57-198 258-400 (434)
140 TIGR00897 2A0118 polyol permea 99.2 5E-09 1.1E-13 95.5 21.9 146 57-214 242-396 (402)
141 PRK12382 putative transporter; 99.2 3.6E-09 7.8E-14 96.1 20.3 146 57-215 236-385 (392)
142 KOG4686 Predicted sugar transp 99.2 8.2E-11 1.8E-15 96.8 7.6 242 60-312 67-331 (459)
143 TIGR00880 2_A_01_02 Multidrug 99.2 2.3E-10 5.1E-15 87.5 9.9 123 82-215 8-134 (141)
144 PRK10091 MFS transport protein 99.2 1E-08 2.3E-13 92.7 22.1 143 60-210 223-367 (382)
145 TIGR00883 2A0106 metabolite-pr 99.2 1.7E-09 3.6E-14 98.0 16.7 130 57-194 239-377 (394)
146 TIGR02718 sider_RhtX_FptX side 99.2 1.5E-08 3.2E-13 92.0 22.6 155 48-213 219-385 (390)
147 cd06174 MFS The Major Facilita 99.2 8.8E-09 1.9E-13 91.6 20.9 148 57-215 195-348 (352)
148 PRK11010 ampG muropeptide tran 99.2 5.7E-08 1.2E-12 90.7 26.8 148 60-215 246-399 (491)
149 PF11700 ATG22: Vacuole efflux 99.1 1E-08 2.2E-13 94.4 21.4 181 38-226 280-474 (477)
150 PRK10504 putative transporter; 99.1 1.1E-08 2.4E-13 95.3 20.9 123 58-185 282-412 (471)
151 PRK09556 uhpT sugar phosphate 99.1 4.9E-09 1.1E-13 97.4 17.9 149 58-214 279-444 (467)
152 TIGR01299 synapt_SV2 synaptic 99.1 4.5E-09 9.8E-14 101.3 18.0 134 78-224 601-738 (742)
153 TIGR00892 2A0113 monocarboxyla 99.1 3.6E-09 7.9E-14 97.9 16.9 146 58-213 262-415 (455)
154 TIGR00900 2A0121 H+ Antiporter 99.1 1.2E-08 2.7E-13 91.3 19.6 125 58-191 232-362 (365)
155 PRK15402 multidrug efflux syst 99.1 8.1E-08 1.8E-12 87.7 23.4 125 60-192 238-370 (406)
156 TIGR00882 2A0105 oligosacchari 99.1 2.9E-08 6.4E-13 90.2 20.3 138 68-213 250-389 (396)
157 PRK10473 multidrug efflux syst 99.1 7.7E-08 1.7E-12 87.4 22.8 80 62-141 229-309 (392)
158 PRK10406 alpha-ketoglutarate t 99.1 6.1E-08 1.3E-12 89.2 22.4 58 57-114 263-321 (432)
159 PRK10213 nepI ribonucleoside t 99.1 7.6E-08 1.6E-12 87.4 22.5 140 60-211 240-383 (394)
160 TIGR00792 gph sugar (Glycoside 99.0 1.3E-08 2.8E-13 93.8 17.7 83 70-153 255-339 (437)
161 PRK10077 xylE D-xylose transpo 99.0 2.6E-08 5.7E-13 92.9 19.3 159 59-224 293-462 (479)
162 PF01306 LacY_symp: LacY proto 99.0 2.7E-08 5.8E-13 88.6 17.1 146 70-222 257-403 (412)
163 PRK09848 glucuronide transport 99.0 2.9E-08 6.2E-13 91.9 18.2 119 65-184 257-384 (448)
164 TIGR00879 SP MFS transporter, 99.0 3E-08 6.4E-13 92.2 17.7 155 58-223 305-474 (481)
165 PRK03893 putative sialic acid 99.0 3E-08 6.4E-13 93.0 17.1 130 58-196 296-432 (496)
166 PRK11902 ampG muropeptide tran 99.0 2.9E-07 6.2E-12 83.9 23.0 144 60-215 233-386 (402)
167 PF05977 MFS_3: Transmembrane 99.0 1.9E-07 4.2E-12 87.0 21.9 124 59-187 240-368 (524)
168 PRK12307 putative sialic acid 99.0 3.8E-08 8.3E-13 90.4 17.2 128 58-194 252-385 (426)
169 TIGR00896 CynX cyanate transpo 99.0 1.6E-07 3.4E-12 84.1 20.7 90 57-147 217-308 (355)
170 TIGR00710 efflux_Bcr_CflA drug 99.0 1.7E-07 3.6E-12 84.8 20.9 98 60-158 229-335 (385)
171 PRK11195 lysophospholipid tran 99.0 2.9E-07 6.3E-12 83.6 22.1 149 62-222 231-384 (393)
172 TIGR01272 gluP glucose/galacto 98.9 2.2E-07 4.7E-12 81.4 20.4 135 58-204 161-300 (310)
173 PF03825 Nuc_H_symport: Nucleo 98.9 3.9E-07 8.6E-12 82.3 22.4 165 46-215 216-391 (400)
174 PF06813 Nodulin-like: Nodulin 98.9 7.3E-08 1.6E-12 80.3 16.3 129 39-168 1-141 (250)
175 COG2223 NarK Nitrate/nitrite t 98.9 5.2E-08 1.1E-12 85.3 15.9 148 57-216 238-398 (417)
176 PRK15034 nitrate/nitrite trans 98.9 2.6E-07 5.7E-12 84.2 20.8 86 59-145 274-370 (462)
177 PLN00028 nitrate transmembrane 98.9 8.7E-08 1.9E-12 89.2 18.2 144 60-215 275-429 (476)
178 PRK10054 putative transporter; 98.9 1.7E-07 3.8E-12 85.1 19.8 139 65-215 237-380 (395)
179 PRK11273 glpT sn-glycerol-3-ph 98.9 2.3E-07 5E-12 85.9 20.8 149 57-215 273-431 (452)
180 TIGR00891 2A0112 putative sial 98.9 7.8E-08 1.7E-12 87.5 17.5 124 62-194 264-392 (405)
181 PRK11043 putative transporter; 98.9 2.6E-07 5.6E-12 84.2 20.5 105 58-163 224-336 (401)
182 PRK10133 L-fucose transporter; 98.9 2.6E-07 5.6E-12 85.0 20.5 87 64-152 287-374 (438)
183 TIGR00901 2A0125 AmpG-related 98.9 1.2E-07 2.6E-12 84.9 17.9 104 57-161 229-348 (356)
184 PRK11646 multidrug resistance 98.9 2.3E-07 4.9E-12 84.5 19.5 148 58-214 229-383 (400)
185 PRK11663 regulatory protein Uh 98.9 3.2E-07 6.9E-12 84.5 20.5 147 58-215 264-420 (434)
186 COG2270 Permeases of the major 98.9 4.2E-08 9E-13 86.0 13.6 173 39-222 252-431 (438)
187 PRK11102 bicyclomycin/multidru 98.9 9.9E-07 2.2E-11 79.6 23.0 118 62-187 220-344 (377)
188 COG2271 UhpC Sugar phosphate p 98.9 3.8E-07 8.3E-12 80.0 19.1 152 62-220 278-435 (448)
189 KOG2816 Predicted transporter 98.9 7.5E-07 1.6E-11 81.4 21.9 271 41-328 22-323 (463)
190 PRK09669 putative symporter Ya 98.9 1.7E-07 3.6E-12 86.6 17.8 111 74-185 266-385 (444)
191 PF01770 Folate_carrier: Reduc 98.9 5.8E-06 1.3E-10 73.6 26.3 85 57-141 23-111 (412)
192 PF13347 MFS_2: MFS/sugar tran 98.9 1.4E-07 3.1E-12 86.7 17.0 130 54-185 242-381 (428)
193 TIGR00893 2A0114 d-galactonate 98.9 3.1E-07 6.6E-12 83.1 18.7 145 57-212 235-392 (399)
194 PF03092 BT1: BT1 family; Int 98.9 2.2E-06 4.7E-11 78.6 24.1 147 58-212 11-168 (433)
195 TIGR00711 efflux_EmrB drug res 98.8 5.9E-07 1.3E-11 84.0 19.8 90 58-147 276-371 (485)
196 PRK14995 methyl viologen resis 98.8 6.4E-07 1.4E-11 84.0 19.9 120 59-183 281-408 (495)
197 PRK08633 2-acyl-glycerophospho 98.8 5.4E-07 1.2E-11 93.3 21.0 106 60-166 256-366 (1146)
198 KOG0637 Sucrose transporter an 98.8 5.3E-07 1.2E-11 79.7 16.0 142 54-208 49-217 (498)
199 TIGR00895 2A0115 benzoate tran 98.8 3.8E-07 8.2E-12 82.7 15.7 101 57-158 270-374 (398)
200 PRK10429 melibiose:sodium symp 98.7 6E-07 1.3E-11 83.6 17.1 127 58-185 252-390 (473)
201 COG2807 CynX Cyanate permease 98.7 4E-06 8.7E-11 72.3 20.2 146 57-209 228-375 (395)
202 TIGR00712 glpT glycerol-3-phos 98.7 1.8E-06 3.9E-11 79.7 19.3 156 58-223 272-437 (438)
203 PRK11462 putative transporter; 98.7 6.8E-06 1.5E-10 76.2 22.3 123 62-185 253-384 (460)
204 TIGR00898 2A0119 cation transp 98.7 2E-06 4.4E-11 80.9 18.9 145 64-225 350-500 (505)
205 TIGR00926 2A1704 Peptide:H+ sy 98.7 2.5E-05 5.5E-10 74.8 26.1 153 57-215 8-178 (654)
206 PRK11652 emrD multidrug resist 98.7 8.9E-06 1.9E-10 73.9 21.8 91 62-153 233-327 (394)
207 TIGR00894 2A0114euk Na(+)-depe 98.7 4E-06 8.6E-11 78.0 19.8 151 58-215 282-446 (465)
208 PF07690 MFS_1: Major Facilita 98.6 2.2E-06 4.8E-11 76.3 17.3 102 56-158 225-335 (352)
209 KOG0569 Permease of the major 98.6 4.4E-06 9.6E-11 76.2 18.7 159 57-227 290-462 (485)
210 KOG4686 Predicted sugar transp 98.6 1.7E-06 3.7E-11 71.9 14.4 128 62-201 290-424 (459)
211 TIGR00887 2A0109 phosphate:H+ 98.6 2.3E-06 4.9E-11 80.5 15.8 156 60-225 311-494 (502)
212 PRK15403 multidrug efflux syst 98.6 3.5E-05 7.7E-10 70.5 22.6 105 60-164 241-353 (413)
213 PRK06814 acylglycerophosphoeth 98.5 7.8E-06 1.7E-10 84.6 20.1 108 59-167 247-379 (1140)
214 TIGR02332 HpaX 4-hydroxyphenyl 98.5 7E-06 1.5E-10 75.1 17.6 60 57-116 262-324 (412)
215 TIGR00885 fucP L-fucose:H+ sym 98.5 2.3E-05 4.9E-10 71.6 20.8 125 58-192 253-381 (410)
216 TIGR00881 2A0104 phosphoglycer 98.5 7.7E-06 1.7E-10 73.6 17.5 131 58-197 237-377 (379)
217 TIGR00903 2A0129 major facilit 98.5 3.1E-05 6.7E-10 69.6 21.1 103 57-164 212-322 (368)
218 COG2211 MelB Na+/melibiose sym 98.5 1.1E-05 2.4E-10 73.1 16.9 117 67-184 267-392 (467)
219 PF12832 MFS_1_like: MFS_1 lik 98.4 1.9E-06 4.2E-11 57.8 8.2 65 48-112 11-75 (77)
220 KOG2504 Monocarboxylate transp 98.4 2.1E-05 4.5E-10 73.2 16.9 147 59-212 320-469 (509)
221 KOG3764 Vesicular amine transp 98.4 3.9E-06 8.5E-11 73.1 10.5 138 58-198 291-435 (464)
222 TIGR00769 AAA ADP/ATP carrier 98.3 0.0011 2.4E-08 60.9 26.1 58 59-116 25-88 (472)
223 COG0477 ProP Permeases of the 98.3 8.2E-05 1.8E-09 64.4 18.4 96 57-153 22-122 (338)
224 TIGR00886 2A0108 nitrite extru 98.3 3E-05 6.5E-10 69.6 15.6 59 58-116 246-305 (366)
225 TIGR00788 fbt folate/biopterin 98.3 1.2E-05 2.6E-10 74.7 12.8 117 65-186 281-411 (468)
226 KOG3098 Uncharacterized conser 98.2 0.00018 3.8E-09 65.4 18.7 76 78-154 56-131 (461)
227 PF06779 DUF1228: Protein of u 98.2 9.2E-06 2E-10 55.0 7.2 71 57-127 12-83 (85)
228 PF03209 PUCC: PUCC protein; 98.2 0.00086 1.9E-08 59.5 21.3 174 41-215 212-394 (403)
229 PF06963 FPN1: Ferroportin1 (F 98.2 0.0053 1.1E-07 55.9 29.6 70 240-312 252-324 (432)
230 COG0738 FucP Fucose permease [ 98.2 0.00027 6E-09 62.1 17.5 129 57-195 256-387 (422)
231 KOG3762 Predicted transporter 98.1 2.5E-05 5.4E-10 70.8 10.1 136 50-186 384-520 (618)
232 PF05978 UNC-93: Ion channel r 98.0 0.0006 1.3E-08 52.7 14.9 75 78-153 43-117 (156)
233 TIGR00924 yjdL_sub1_fam amino 97.9 0.0012 2.5E-08 61.7 18.4 86 74-160 314-419 (475)
234 PRK09584 tppB putative tripept 97.8 0.0017 3.7E-08 61.0 17.2 84 75-159 319-419 (500)
235 KOG2532 Permease of the major 97.7 0.0018 3.9E-08 59.8 15.9 153 57-215 278-443 (466)
236 KOG2533 Permease of the major 97.7 0.00085 1.8E-08 62.2 13.3 60 57-116 293-358 (495)
237 KOG0253 Synaptic vesicle trans 97.6 0.00034 7.3E-09 60.9 8.5 124 83-224 392-524 (528)
238 PRK10207 dipeptide/tripeptide 97.6 0.0069 1.5E-07 56.7 17.9 103 76-183 313-436 (489)
239 KOG3097 Predicted membrane pro 97.6 0.042 9.2E-07 47.3 20.7 94 87-181 73-180 (390)
240 KOG0254 Predicted transporter 97.5 0.0068 1.5E-07 57.3 16.2 59 57-116 315-373 (513)
241 TIGR01301 GPH_sucrose GPH fami 97.3 0.021 4.5E-07 53.0 17.3 136 83-223 316-475 (477)
242 PF02487 CLN3: CLN3 protein; 96.9 0.24 5.2E-06 44.6 18.5 120 77-208 64-184 (402)
243 PF12832 MFS_1_like: MFS_1 lik 96.8 0.013 2.8E-07 39.3 8.1 45 267-312 19-66 (77)
244 PRK15462 dipeptide/tripeptide 96.8 0.0071 1.5E-07 56.2 9.0 62 263-326 24-89 (493)
245 PF06609 TRI12: Fungal trichot 96.7 0.17 3.7E-06 48.1 16.9 80 66-145 340-426 (599)
246 PF00083 Sugar_tr: Sugar (and 96.6 1.7E-05 3.6E-10 73.5 -9.9 156 58-227 274-444 (451)
247 KOG3762 Predicted transporter 96.5 0.0043 9.2E-08 56.9 4.8 59 57-115 31-89 (618)
248 KOG3810 Micronutrient transpor 96.4 0.11 2.5E-06 45.2 12.7 240 58-312 25-302 (433)
249 KOG2563 Permease of the major 96.4 0.051 1.1E-06 49.0 10.8 89 63-152 292-386 (480)
250 PF03219 TLC: TLC ATP/ADP tran 96.3 0.94 2E-05 42.3 26.9 79 234-312 267-350 (491)
251 KOG3574 Acetyl-CoA transporter 96.3 0.34 7.4E-06 42.9 15.1 46 59-106 52-102 (510)
252 KOG2816 Predicted transporter 96.1 0.43 9.3E-06 44.2 15.8 104 63-168 268-376 (463)
253 PTZ00207 hypothetical protein; 95.9 0.13 2.8E-06 49.1 11.6 148 60-215 376-548 (591)
254 KOG2615 Permease of the major 95.8 0.38 8.2E-06 42.7 13.1 115 65-188 290-410 (451)
255 KOG0252 Inorganic phosphate tr 95.7 0.1 2.3E-06 47.2 9.6 43 284-328 87-129 (538)
256 KOG0255 Synaptic vesicle trans 95.4 2.6 5.6E-05 40.0 19.0 62 91-153 369-434 (521)
257 PF00854 PTR2: POT family; In 95.2 0.16 3.5E-06 45.8 9.6 106 103-216 2-120 (372)
258 KOG1237 H+/oligopeptide sympor 94.5 2.7 5.9E-05 40.2 16.0 153 57-215 58-241 (571)
259 TIGR00805 oat sodium-independe 94.1 0.8 1.7E-05 44.5 12.0 59 58-116 351-413 (633)
260 PF05631 DUF791: Protein of un 94.0 1.2 2.6E-05 39.4 11.5 29 284-312 72-100 (354)
261 COG3104 PTR2 Dipeptide/tripept 92.5 9 0.0002 35.6 17.8 106 76-187 328-451 (498)
262 PF06963 FPN1: Ferroportin1 (F 92.2 7.7 0.00017 35.7 14.5 115 57-173 279-407 (432)
263 PRK03612 spermidine synthase; 91.8 12 0.00026 35.5 19.1 39 60-98 38-76 (521)
264 COG3202 ATP/ADP translocase [E 91.1 13 0.00028 34.6 24.6 80 36-115 22-105 (509)
265 PF03092 BT1: BT1 family; Int 90.6 1.5 3.3E-05 40.4 8.5 48 69-116 252-299 (433)
266 KOG1479 Nucleoside transporter 89.2 17 0.00037 33.0 17.5 18 290-307 292-309 (406)
267 PF07672 MFS_Mycoplasma: Mycop 88.4 1.9 4.1E-05 36.2 6.5 21 238-258 85-105 (267)
268 PF06779 DUF1228: Protein of u 88.3 2.5 5.4E-05 28.8 6.0 61 269-332 13-76 (85)
269 TIGR00806 rfc RFC reduced fola 87.6 3.5 7.6E-05 38.3 8.4 57 274-332 51-111 (511)
270 KOG2325 Predicted transporter/ 86.4 2.8 6.1E-05 38.9 7.1 33 177-209 435-467 (488)
271 PRK11469 hypothetical protein; 86.0 14 0.00031 29.6 10.2 25 92-116 155-179 (188)
272 KOG1330 Sugar transporter/spin 83.7 7.4 0.00016 35.8 8.3 40 60-99 271-310 (493)
273 COG5336 Uncharacterized protei 82.1 3 6.4E-05 29.5 4.1 31 77-107 47-78 (116)
274 PF06813 Nodulin-like: Nodulin 77.1 9.9 0.00022 32.1 6.6 72 261-337 16-90 (250)
275 PF09930 DUF2162: Predicted tr 75.2 46 0.001 27.5 10.4 52 62-116 121-172 (224)
276 PF03596 Cad: Cadmium resistan 74.9 10 0.00022 30.5 5.7 98 3-103 55-166 (191)
277 TIGR00688 rarD rarD protein. T 74.9 50 0.0011 27.8 12.4 46 69-116 94-139 (256)
278 COG2119 Predicted membrane pro 73.8 43 0.00094 26.6 10.0 30 85-114 147-176 (190)
279 KOG3574 Acetyl-CoA transporter 69.8 17 0.00037 32.8 6.3 82 244-331 27-118 (510)
280 KOG3098 Uncharacterized conser 68.0 1.1E+02 0.0023 28.7 17.6 76 85-161 292-391 (461)
281 KOG3626 Organic anion transpor 66.3 80 0.0017 31.3 10.6 55 58-112 413-471 (735)
282 KOG3880 Predicted small molecu 64.3 36 0.00077 29.9 7.0 71 75-145 65-136 (409)
283 PF13386 DsbD_2: Cytochrome C 61.3 86 0.0019 25.3 15.9 28 163-190 34-61 (199)
284 TIGR00939 2a57 Equilibrative N 60.3 1.5E+02 0.0032 27.6 21.0 30 123-153 105-134 (437)
285 PF02487 CLN3: CLN3 protein; 55.4 1.7E+02 0.0036 26.8 13.4 49 119-168 330-381 (402)
286 TIGR00939 2a57 Equilibrative N 48.8 2.3E+02 0.0049 26.4 10.4 46 122-168 370-418 (437)
287 COG5336 Uncharacterized protei 48.6 98 0.0021 22.1 6.6 25 288-312 49-74 (116)
288 KOG4830 Predicted sugar transp 48.5 32 0.0007 29.3 4.2 48 58-105 38-94 (412)
289 TIGR00880 2_A_01_02 Multidrug 45.2 1.1E+02 0.0024 21.9 13.3 28 284-311 90-117 (141)
290 PF01770 Folate_carrier: Reduc 44.9 2.5E+02 0.0055 25.8 11.4 94 58-152 268-367 (412)
291 PF07672 MFS_Mycoplasma: Mycop 42.7 2.2E+02 0.0047 24.4 13.3 68 76-143 144-223 (267)
292 KOG0637 Sucrose transporter an 40.0 37 0.00079 31.5 3.6 63 79-141 339-402 (498)
293 COG4769 Predicted membrane pro 39.8 1.8E+02 0.0039 22.7 8.2 47 85-136 86-132 (181)
294 PF06800 Sugar_transport: Suga 39.2 2.5E+02 0.0054 24.1 15.2 25 5-29 103-127 (269)
295 PF11045 YbjM: Putative inner 38.5 1.6E+02 0.0035 21.7 8.0 15 344-358 90-104 (125)
296 PF11872 DUF3392: Protein of u 35.2 1.7E+02 0.0036 21.0 5.5 37 241-277 42-78 (106)
297 COG1971 Predicted membrane pro 33.4 2.6E+02 0.0055 22.5 9.8 26 91-116 156-181 (190)
298 KOG3810 Micronutrient transpor 32.5 3.8E+02 0.0083 24.3 13.0 93 60-153 257-354 (433)
299 PRK03612 spermidine synthase; 32.0 3.9E+02 0.0085 25.5 9.3 55 54-108 125-182 (521)
300 PF07332 DUF1469: Protein of u 30.8 2.1E+02 0.0045 20.7 8.1 10 230-239 105-114 (121)
301 PRK11588 hypothetical protein; 29.5 5E+02 0.011 24.7 17.6 36 92-127 136-174 (506)
302 PF04346 EutH: Ethanolamine ut 28.3 4.4E+02 0.0095 23.6 10.7 57 85-141 59-119 (354)
303 COG0477 ProP Permeases of the 27.9 1.6E+02 0.0035 24.5 5.8 30 283-312 41-70 (338)
304 KOG2601 Iron transporter [Inor 27.9 4.5E+02 0.0097 24.2 8.1 30 83-112 74-103 (503)
305 PF02694 UPF0060: Uncharacteri 26.3 1.2E+02 0.0026 21.7 3.6 45 72-116 54-98 (107)
306 PF02554 CstA: Carbon starvati 25.9 5E+02 0.011 23.5 13.2 21 291-311 165-185 (376)
307 PF11694 DUF3290: Protein of u 23.9 3.4E+02 0.0074 20.9 6.7 17 58-74 83-99 (149)
308 PF08611 DUF1774: Fungal prote 23.6 67 0.0014 22.5 1.9 25 195-219 50-74 (97)
309 PF13536 EmrE: Multidrug resis 23.5 2.8E+02 0.0061 19.7 8.6 39 73-114 62-101 (113)
310 PF13000 Acatn: Acetyl-coenzym 23.3 6.7E+02 0.014 24.0 15.9 47 59-107 22-75 (544)
311 PLN00411 nodulin MtN21 family 22.9 5.6E+02 0.012 23.0 11.0 45 69-113 102-150 (358)
312 PF11947 DUF3464: Protein of u 22.7 3E+02 0.0065 21.3 5.4 30 73-102 97-126 (153)
313 PF04911 ATP-synt_J: ATP synth 22.7 1.3E+02 0.0029 18.4 2.8 15 1-15 10-24 (54)
314 TIGR02123 TRAP_fused TRAP tran 22.1 7.6E+02 0.016 24.3 14.4 19 150-168 235-253 (613)
315 COG0306 PitA Phosphate/sulphat 21.8 5.3E+02 0.011 22.9 7.5 51 6-56 141-192 (326)
316 PRK02237 hypothetical protein; 21.5 2.1E+02 0.0047 20.5 4.1 45 72-116 56-100 (109)
317 PF03137 OATP: Organic Anion T 21.1 32 0.00069 32.9 0.0 53 57-109 325-381 (539)
No 1
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=100.00 E-value=2.7e-34 Score=243.98 Aligned_cols=329 Identities=64% Similarity=1.079 Sum_probs=289.0
Q ss_pred hHHHHHHHHHHHHHHHhhhccccccCCCcccccchhHHHHHHHHHHHHHhhhhhHHHHHHHHhhCCChhhhHHHHHHHHH
Q 018113 4 FFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFG 83 (360)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~ 83 (360)
+++..+..++++...+|+.++++++..+++.+++.|+..+.+..+....|++++|+...+++++|++..|++.++..++.
T Consensus 1 ~~~~~f~~l~~~~~~l~~~~~~~~~~~~~~~f~~Fqr~yl~vY~La~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~ 80 (354)
T PF05631_consen 1 FYYLVFGVLAAVCAALELSKRTKDRASTNPAFRRFQRKYLLVYLLAMAADWLQGPYLYALYESYGFSEHQIAILFVAGFA 80 (354)
T ss_pred CchhHHHHHHHHHHHHheecccccccccChHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHH
Confidence 35677888889999999888877777777888999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhccccchhhHHH
Q 018113 84 SSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWL 163 (360)
Q Consensus 84 ~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~ 163 (360)
.+.+.+++.|.++||+|||+.-+..+++.++++++-..++++.++++|++.|++.+..+.+-+++++.|+++|+....+.
T Consensus 81 Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L 160 (354)
T PF05631_consen 81 SSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWL 160 (354)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 99999999999999999999999999999999988888999999999999999999999999999999998898888887
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHH
Q 018113 164 SITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAI 243 (360)
Q Consensus 164 ~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (360)
...+......++++-++.++++++.+.+..+.+...||.....+..++..++...|+|+.++.++.++..++.++..+.+
T Consensus 161 ~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i 240 (354)
T PF05631_consen 161 SDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAI 240 (354)
T ss_pred HHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHH
Confidence 77777666678888889999999998887777778899998888888888887889998877665555566777778889
Q ss_pred hcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHH
Q 018113 244 ASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVS 323 (360)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 323 (360)
.+||+++.+.....++.+.+|.++..|.|....+..+.+.|.+++.+.+..++|+.+..++..|- .|.+..+.....++
T Consensus 241 ~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~-~~~e~~l~~v~~~a 319 (354)
T PF05631_consen 241 LSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLSKS-LRPESLLRYVFAVA 319 (354)
T ss_pred HcCchhHHHHHHHHHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHH
Confidence 99999999999999999999999999999988666667779999999999999999998777664 45556677777777
Q ss_pred HHHHHHhHhc
Q 018113 324 SVSLLLPIVT 333 (360)
Q Consensus 324 ~~~~~~~~~~ 333 (360)
.+++.++.+.
T Consensus 320 a~~l~~pv~~ 329 (354)
T PF05631_consen 320 AVSLAIPVVT 329 (354)
T ss_pred HHHHHHHHHH
Confidence 7777777665
No 2
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.97 E-value=7.4e-31 Score=211.05 Aligned_cols=335 Identities=89% Similarity=1.424 Sum_probs=302.7
Q ss_pred CchhHHHHHHHHHHHHHHHhhhccccccCCCcccccchhHHHHHHHHHHHHHhhhhhHHHHHHHHhhCCChhhhHHHHHH
Q 018113 1 MEMFFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIA 80 (360)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~ 80 (360)
|+-+.+..+.++++....+|+.+.++++..++..+.+.+...+.+..+.+..|+.++|++.+++++||....++|.++..
T Consensus 1 MevfyylvFggl~a~vagLELSk~nkdRintsssFnsFknnyllVyslmmAgDWLQgPYvYyLYstYgFgkG~IgqLfia 80 (454)
T KOG4332|consen 1 MEVFYYLVFGGLAAVVAGLELSKCNKDRINTSSSFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGDIGQLFIA 80 (454)
T ss_pred CeeeehHHHHHHHHHHHHhhhhhcccccccCchhHHHHhhhHHHHHHHHHhhhhhcCceeeeeehhcCccCCccceeeec
Confidence 67788999999999999999999988888888888888888899999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc-cccchh
Q 018113 81 GFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFE 159 (360)
Q Consensus 81 ~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~ 159 (360)
++...++.+.+.|.++||-|||+.-+.-++.+.++++.-.++.|-.++++|.+-|++.+..+....+++++|+ ++|++.
T Consensus 81 GfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~Fe 160 (454)
T KOG4332|consen 81 GFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFE 160 (454)
T ss_pred ccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCCh
Confidence 9999999999999999999999998888888888888889999999999999999999999999999999998 689999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHH
Q 018113 160 QQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGA 239 (360)
Q Consensus 160 ~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (360)
..+....++-....|+.+-++++++.+..+.+..+.+...+|-..+.+..++..+....|.|+.+++.+.++...+.+..
T Consensus 161 qqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENygdps~~kdlltqf~ga 240 (454)
T KOG4332|consen 161 QQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGDPSENKDLLTQFKGA 240 (454)
T ss_pred HhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhhHHHHHHhhHh
Confidence 99999999989999999999999999999999999999999988888877777777788999988888888877778888
Q ss_pred HHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHH
Q 018113 240 AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIV 319 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 319 (360)
.+.+..|+++.++.....++...+|.+...|.|....+..+.+.|.+++.+.+..+.|+-+..++..|-..|...+..+.
T Consensus 241 a~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqiv 320 (454)
T KOG4332|consen 241 ARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIV 320 (454)
T ss_pred HHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHH
Confidence 88899999999999999999999999999999999877777778999999999999999999999888777766777777
Q ss_pred HHHHHHHHHHhHhccC
Q 018113 320 FVVSSVSLLLPIVTIP 335 (360)
Q Consensus 320 ~~~~~~~~~~~~~~~~ 335 (360)
+.+....+.++.....
T Consensus 321 f~vs~a~l~Lpilt~~ 336 (454)
T KOG4332|consen 321 FLVSIAALLLPILTSS 336 (454)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 7777777777666543
No 3
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.8e-26 Score=200.87 Aligned_cols=253 Identities=19% Similarity=0.273 Sum_probs=190.8
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
.+.+|++.+|+|+|..+.|+..+.+..+..+++++...+.||+.||++++....++.++. ++++++||+.++++|++.|
T Consensus 33 ~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g 112 (394)
T COG2814 33 VGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAG 112 (394)
T ss_pred HhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 677999999999999999999999999999999999999999999999999999999998 8899999999999999999
Q ss_pred hHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 212 (360)
+..|..++.... +..+. ++|++..+......+.... +|..++..++ |. |+||..|+..+.+.++..
T Consensus 113 ~a~G~f~~i~~~-~a~~lvpp~~~~~Aiaiv~~G~tlA~v----~GvPLGt~ig----~~--~GWR~~F~~ia~l~ll~~ 181 (394)
T COG2814 113 LAHGVFWSIAAA-LAARLVPPGKRGRALALVFTGLTLATV----LGVPLGTFLG----QL--FGWRATFLAIAVLALLAL 181 (394)
T ss_pred HHHHHHHHHHHH-HHHHHcCccchhhHHHHHHHHHHHHHH----HhccHHHHHH----HH--hhHHHHHHHHHHHHHHHH
Confidence 999999988855 66664 6777765555544443333 3333333333 33 678889999988888888
Q ss_pred HHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHH
Q 018113 213 VIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFAT 289 (360)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 289 (360)
.......|+++.+++++.+ .+ +..+++|+|+++.......+...+.+. ..+|...++++..+.+. +.....
T Consensus 182 ~~~~~~lP~~~~~~~~~~~-~~----~~~~~l~~p~v~~~l~~t~l~~~g~F~-~ftYi~P~L~~v~g~s~~~vs~~Ll~ 255 (394)
T COG2814 182 LLLWKLLPPSEISGSLPGP-LR----TLLRLLRRPGVLLGLLATFLFMTGHFA-LYTYIRPFLESVAGFSVSAVSLVLLA 255 (394)
T ss_pred HHHHHhCCCccCCCCCCcc-hh----HHHHHhcCchHHHHHHHHHHHHcchhh-hHHhHHHHHHHccCCCHhHHHHHHHH
Confidence 8876777711111111111 11 123678999999887777777777777 57777777777777665 577788
Q ss_pred HHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHH
Q 018113 290 FMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLL 329 (360)
Q Consensus 290 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 329 (360)
+++++++|+.++|++.|| +.|+ .+.............
T Consensus 256 ~Gv~~~~Gn~~gGrl~dr-~~~~--~l~~~~~l~a~~~l~ 292 (394)
T COG2814 256 FGIAGFIGNLLGGRLADR-GPRR--ALIAALLLLALALLA 292 (394)
T ss_pred HHHHHHHHHHHHhhhccc-cchh--HHHHHHHHHHHHHHH
Confidence 899999999999999999 6663 344443443433333
No 4
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.95 E-value=8.1e-26 Score=207.31 Aligned_cols=265 Identities=15% Similarity=0.202 Sum_probs=173.0
Q ss_pred hhHHHHHHHHHHHHHhhhh----hHHHHHHHHhhC---CChhh---hHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHH
Q 018113 38 FKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYG---FGKGE---IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVT 107 (360)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g---~s~~~---~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~ 107 (360)
+++..+..+.+....+++| +...|.+.+|++ .+..+ .+..++..+++..++++++|+++||+|||+++..
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 3444555556667777777 233788888884 45553 3456677777777999999999999999999999
Q ss_pred HHHHHHHHH-HHHhcchHH--------HHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHH
Q 018113 108 YCLTYILSC-ITKHSPQYK--------ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGN 175 (360)
Q Consensus 108 ~~~~~~~~~-l~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~ 175 (360)
+.++++++. ++++++++. .++++|+++|++.|..++.... +++|. ++|++..+..... ...|.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~-~i~e~~p~~~rg~~~~~~~~~----~~~G~ 173 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSAT-YMSEVAVEGRKGFYASFQYVT----LIGGQ 173 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHH-HHHHhCCCCcccHHHHHHHHH----HHHHH
Confidence 999999977 778888764 5889999999999999898855 88887 5666644333332 33333
Q ss_pred HHHHHHHhhhhhhhhc--ccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHH
Q 018113 176 GLVAILSGLFGNLLVD--SFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLG 253 (360)
Q Consensus 176 ~~g~~~~~~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (360)
.++..+...+...+.+ ...|+||.+|.+.++..++..++. ...||+++.+++ .++.+.+.++++|+++.+...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~-~~~~e~~~~~~~----~~~~~~~~~~l~~~~~~~~~~ 248 (432)
T PRK10406 174 LLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLR-RQLDETSQQETR----ALKEAGSLKGLWRNRRAFIMV 248 (432)
T ss_pred HHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHH-hcCCCCchHHHh----hhcccccHHHHHhhHHHHHHH
Confidence 3333333333322111 124778888987766665543332 333443221111 111122456678888887765
Q ss_pred HHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 254 AIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
....+.....++....|.|.|+++..+.+. +.......+...++..+.|+++||++||+
T Consensus 249 ~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~ 310 (432)
T PRK10406 249 LGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRT 310 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH
Confidence 555444233333357899998876656554 34455556677788889999999999985
No 5
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.95 E-value=3.7e-25 Score=201.42 Aligned_cols=265 Identities=15% Similarity=0.114 Sum_probs=180.5
Q ss_pred chhHHHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHH
Q 018113 37 SFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY 112 (360)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~ 112 (360)
|.+|......++....++++ +...|.+.+|+|+|+++.|++.+..+++..+++++.|+++||+|||+++..+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 44566666777777777776 34488899999999999999999999999999999999999999999999999999
Q ss_pred HHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 018113 113 ILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL 188 (360)
Q Consensus 113 ~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (360)
+++. ++++++|++.+++.|+++|++.+...+.... ++.|+ ++|++..+.... +.. +|..+++.+++.
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~-~~~~~~~~~~rg~~~~~~~~----~~~----~g~~~~~~~~~~ 154 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGFLPGILL-YLTFWFPAYFRARANALFMI----AMP----VTMALGLILSGY 154 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHH-HHHHHcCHHHHHHHHHHHHH----HHH----HHHHHHHHHHHH
Confidence 9877 7788999999999999999999998887755 77776 456664443332 223 444444444444
Q ss_pred hhcc----cCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCC---c-chhHH-HH---------------------HHH
Q 018113 189 LVDS----FSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPS---E-SKDLL-TQ---------------------FRG 238 (360)
Q Consensus 189 l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~-~~---------------------~~~ 238 (360)
+.+. ..++||..|.+.+...++...+.....||++++++ + +++.. +. .++
T Consensus 155 l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (412)
T TIGR02332 155 ILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRS 234 (412)
T ss_pred HHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHH
Confidence 4321 12467777877666555444444344455432211 0 00000 00 001
Q ss_pred HHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCC-CCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 239 AAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND-EEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
.++++ +++.++.......+.....+. ...|.|.++++. .+.+. +.......++.+++.+..|+++||+++|+
T Consensus 235 ~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~ 310 (412)
T TIGR02332 235 MLREI-FTPAIMLYTLAYFCLTNTLSA-INIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERK 310 (412)
T ss_pred HHHHh-cChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccH
Confidence 12222 346666655555554444444 678999998763 34332 45667778889999999999999999775
No 6
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=1.2e-25 Score=193.50 Aligned_cols=266 Identities=15% Similarity=0.135 Sum_probs=203.8
Q ss_pred cccchhHHHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHH
Q 018113 34 AFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYC 109 (360)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~ 109 (360)
..+|+|+.++...++.....++. +...|.+.+|.++|.+|+|.+.+..++...++..+.|.++||.++|+.+..++
T Consensus 22 ~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gL 101 (448)
T COG2271 22 TYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGL 101 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHH
Confidence 45666777777777777766665 23389999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 018113 110 LTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (360)
Q Consensus 110 ~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 185 (360)
++.++.. +.+++++.+.+.++.++.|..+|.-+|.+.. .++.+ +|||..-+..+...+ +|.++.+.+..+
T Consensus 102 ilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~-~i~~Wfsr~eRG~~~siWn~shN----iGGal~~~~~~l- 175 (448)
T COG2271 102 ILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCAR-TITHWFSRKERGTWWSIWNTSHN----IGGALAPLVALL- 175 (448)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHH-HHHHHcCccccCceEEEehhhhh----cccchHHHHHHH-
Confidence 9999977 8899999999999999999999999999967 66655 889986666665555 444333333311
Q ss_pred hhhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCC----------CCcchh-H-------HHHHHHHHHHHhcch
Q 018113 186 GNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD----------PSESKD-L-------LTQFRGAAVAIASDE 247 (360)
Q Consensus 186 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~-------~~~~~~~~~~~~~~~ 247 (360)
+.+.++ ++||..|+..++++++..++.....++++++ +|+.+. . ....+.-.+.+++||
T Consensus 176 -a~~~~~--~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk 252 (448)
T COG2271 176 -AFFAFH--GGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNK 252 (448)
T ss_pred -HHHHhc--cchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcCh
Confidence 444444 3677889888887777666665444433221 011110 0 011112345789999
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcC
Q 018113 248 KIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSP 309 (360)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g 309 (360)
.+|.+++...+....-+. +..|.|.|+.|..|.+. +...+.+-.++++|++++|+++||.-
T Consensus 253 ~iW~la~a~vfvYivR~g-i~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklf 316 (448)
T COG2271 253 LIWLLALANVFVYVVRYG-INDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLF 316 (448)
T ss_pred HHHHHHHHHHHHHHHHHH-HhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 999999999999988888 69999999988877766 57778889999999999999999984
No 7
>PRK03545 putative arabinose transporter; Provisional
Probab=99.94 E-value=2.4e-24 Score=195.12 Aligned_cols=237 Identities=16% Similarity=0.197 Sum_probs=167.2
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
.+.+|.+.+|+|.|+++.|+..+...++..+++++.|.++||+|||+++..+..+.+++. .+.+++|++.++++|+++|
T Consensus 29 ~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G 108 (390)
T PRK03545 29 VGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIA 108 (390)
T ss_pred HcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 466899999999999999999999998888999999999999999999999999999887 7788999999999999999
Q ss_pred hHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 212 (360)
++.+...+...+ ++.|. ++|++..+.... +..+|..+++.+++.+.+.. +||..|++.+.+.++..
T Consensus 109 ~~~~~~~~~~~~-~i~~~~~~~~r~~~~g~~~~--------~~~~g~~ig~~l~~~l~~~~--gw~~~f~~~~~~~~l~~ 177 (390)
T PRK03545 109 FAHAIFWSITAS-LAIRVAPAGKKAQALSLLAT--------GTALAMVLGLPLGRVIGQYL--GWRTTFLAIGGGALITL 177 (390)
T ss_pred HHHHHHHHHHHH-HHHHhCChhhhhhHHHHHHH--------HHHHHHHHHhhHHHHHHHHh--cHHHHHHHHHHHHHHHH
Confidence 999888777755 66665 566664443332 33345555555555555544 45566777666555554
Q ss_pred HHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHH
Q 018113 213 VIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFAT 289 (360)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 289 (360)
.......||++++++ +.. ++.++.+|+|+++.......+.....+. ...+.+.+.+++.+.+. +.....
T Consensus 178 ~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~g~s~~~~~~~~~~ 249 (390)
T PRK03545 178 LLLIKLLPLLPSEHS---GSL----KSLPLLFRRPALVSLYLLTVVVVTAHFT-AYSYIEPFVQQVAGLSENFATLLLLL 249 (390)
T ss_pred HHHHHhCCCCCCCCc---chH----HHHHHHHhCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCccHHHHHHHH
Confidence 444333343322111 111 2344678888877654444443333333 34566666666555444 456677
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCh
Q 018113 290 FMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 290 ~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
..++++++++..+++.||+++|+
T Consensus 250 ~~~~~~~g~~~~g~l~dr~~~~~ 272 (390)
T PRK03545 250 FGGAGIIGSVLFSRLGNRHPSGF 272 (390)
T ss_pred HHHHHHHHHHHHHHHhhccchhH
Confidence 78889999999999999998774
No 8
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.94 E-value=5.1e-24 Score=198.47 Aligned_cols=275 Identities=16% Similarity=0.077 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHH
Q 018113 40 NNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS 115 (360)
Q Consensus 40 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~ 115 (360)
|..+....+..+...+| +..+|.+.+|+|.+.++.+++.+.+.++.....++.|+++||+|||++++.+..+..++
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~ 84 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLA 84 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 44555566666666666 34499999999999999999999999988889999999999999999999999999998
Q ss_pred H-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 018113 116 C-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD 191 (360)
Q Consensus 116 ~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~ 191 (360)
+ ++++++|++.++++|+++|++.+...+.....+..+. ++|++..+.... +..+|..++|.+++.+.+
T Consensus 85 ~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~--------~~~~g~~~gp~lgg~l~~ 156 (495)
T PRK14995 85 SLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAA--------VGSGGAAFGPLVGGILLE 156 (495)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHhhc
Confidence 7 8899999999999999999999988776645232332 455553333222 233566667777777776
Q ss_pred ccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHH-----------------------------------
Q 018113 192 SFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQF----------------------------------- 236 (360)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------- 236 (360)
+.+| |+.|++...+.++..++.....|+++++++++.+.....
T Consensus 157 ~~gw--r~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (495)
T PRK14995 157 HFYW--GSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGAL 234 (495)
T ss_pred cCCh--HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHH
Confidence 6554 456776665555555444344454432222111110000
Q ss_pred ------HHH--------HHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHH
Q 018113 237 ------RGA--------AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSS 299 (360)
Q Consensus 237 ------~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 299 (360)
..+ ..+++|+|.+........+.....+. ...+.|.|+++..+.++ +.......++..++.+
T Consensus 235 ~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~ 313 (495)
T PRK14995 235 LLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVG-FELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGP 313 (495)
T ss_pred HHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 000 01456677666554444444344444 46678888887666665 5666777888999999
Q ss_pred HHHHHHhhcCCChhhHHHHHHHHHHHHH
Q 018113 300 LASRLMARSPPRVESYMQIVFVVSSVSL 327 (360)
Q Consensus 300 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 327 (360)
+.|++.||+|+|+ .+..+..+..+..
T Consensus 314 ~~g~l~~r~g~~~--~~~~g~~~~~~~~ 339 (495)
T PRK14995 314 IAGILVSRLGLRL--VATGGMALSALSF 339 (495)
T ss_pred HHHHHHHHcCchH--HHHHHHHHHHHHH
Confidence 9999999999874 4444444444333
No 9
>PRK10133 L-fucose transporter; Provisional
Probab=99.94 E-value=4.3e-24 Score=195.48 Aligned_cols=263 Identities=12% Similarity=0.122 Sum_probs=170.6
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HH---HhcchHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT---KHSPQYKILMIGRI 132 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~---~~~~~~~~l~~~r~ 132 (360)
.+..|.+++++|+|+++.|+..+...++..+.+++.|++.||+|||+++..+..+.+++. ++ ..+++++.++++|+
T Consensus 46 ~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~ 125 (438)
T PRK10133 46 DILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLF 125 (438)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 567999999999999999999999999999999999999999999999999999999977 43 46899999999999
Q ss_pred HHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------------hc-ccCC
Q 018113 133 LGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLL-------------VD-SFSL 195 (360)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l-------------~~-~~~~ 195 (360)
++|++.+...+...+ ++.|. ++|+...+..+.... +|..+|+.+++.+.... .+ ..+|
T Consensus 126 l~G~g~g~~~~~~~~-~v~~~~~~~~~~~~~s~~~~~~~----~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w 200 (438)
T PRK10133 126 IIAAGLGCLETAANP-FVTVLGPESSGHFRLNLAQTFNS----FGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAY 200 (438)
T ss_pred HHHHHHHHHHhhHHH-HHHHhCChhhHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHH
Confidence 999999999888866 66665 222222333333333 44444444443322000 00 0123
Q ss_pred ------CCchhhhhhH-HHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHH
Q 018113 196 ------GPVAPFDAAA-CFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVF 268 (360)
Q Consensus 196 ------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (360)
+|+.+|.... ...++..+......||.++++++ ++..++..+..++++++|+++...+...+.....+. ..
T Consensus 201 ~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~-~~ 278 (438)
T PRK10133 201 KHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS-DAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTA-CW 278 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc-cccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHH-HH
Confidence 3555665433 22222222222334442221111 111112223445778888887665555554444444 45
Q ss_pred hhhcccc-CCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHH
Q 018113 269 LWTPALS-PNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLL 328 (360)
Q Consensus 269 ~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 328 (360)
.|.+.|. ++..+.++ +.......++.+++++..+++.||+++|+ .+..+..+....+.
T Consensus 279 ~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~--~l~~~~~~~~~~~~ 340 (438)
T PRK10133 279 SYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHK--VLAAYALIAMALCL 340 (438)
T ss_pred HHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH--HHHHHHHHHHHHHH
Confidence 6777774 55566665 56678888999999999999999999884 34444444433333
No 10
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.94 E-value=3.4e-24 Score=195.14 Aligned_cols=267 Identities=15% Similarity=0.087 Sum_probs=172.9
Q ss_pred ccchhHHHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHH
Q 018113 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (360)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 110 (360)
+++++|+.+..+.+....++++ .+..|.+.+++|.|+++.+++.+...++..+++++.|.++||+|||+++..+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 4556677777777777777776 466899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 018113 111 TYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (360)
Q Consensus 111 ~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 186 (360)
+.+++. ++.++++++.+++.|++.|++.+..++.... ++.|. ++|++..+.... +..+|..+++.++
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~--------~~~~g~~~~~~l~ 156 (405)
T TIGR00891 86 LFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAA-YVIESWPKHLRNKASGLLIS--------GYAVGAVVAAQVY 156 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHH-HHHHhCChhhhhHHHHHHHH--------HHHHHHHHHHHHH
Confidence 888877 7788999999999999999999998887755 77775 556554333332 2234445555555
Q ss_pred hhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCcch--h-HHHHHHH---H---HHH--------H----hc
Q 018113 187 NLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESK--D-LLTQFRG---A---AVA--------I----AS 245 (360)
Q Consensus 187 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~---~---~~~--------~----~~ 245 (360)
+.+.+..+.+|+..+.+.....++..... ...||+++.+++++ + ..+..++ . .++ . .+
T Consensus 157 ~~l~~~~~~~w~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (405)
T TIGR00891 157 SLVVPVWGDGWRALFFISILPIIFALWLR-KNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGK 235 (405)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHHHH-HhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhh
Confidence 55444444346677766544444333322 34454332111100 0 0000000 0 000 0 00
Q ss_pred chh-HHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 246 DEK-IALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 246 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
++. +........+..... .....+.|.|..++.+.+. +.......++.++++++.+++.||++||+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~ 305 (405)
T TIGR00891 236 RWPTFVYLVVLVLFANLYS-HPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRK 305 (405)
T ss_pred hhHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchh
Confidence 111 111111111111222 2245667877766555554 45667778889999999999999999985
No 11
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.94 E-value=1.5e-24 Score=195.35 Aligned_cols=257 Identities=14% Similarity=0.059 Sum_probs=168.1
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
.++.|.+.+|+|+|+++.|++.+...++..+++++.|+++||+|||+++..+.++.+++. +++++++++.++++|++.|
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 102 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLAS 102 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 577999999999999999999999999999999999999999999999999999998877 7789999999999999999
Q ss_pred hHhhhhhhhhhhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 213 (360)
++.+..++.... .+.|+ ++|++..+... .+..+|..+++.+...+.+. ++||..|.+.+.+.++...
T Consensus 103 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~--~~~~~~f~~~~~~~~~~~~ 171 (377)
T TIGR00890 103 AGVGIAYGIALN-TAVKWFPDKRGLASGIII--------GGYGLGSFILSPLITSVINL--EGVPAAFIYMGIIFLLVIV 171 (377)
T ss_pred HHHHHHHHhHHH-HHHHHcCcccHHHHHHHH--------HhcchhHhHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHH
Confidence 999987776655 56654 55655333322 23334444444444444443 3566677766655554444
Q ss_pred HHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHH
Q 018113 214 IILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATF 290 (360)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 290 (360)
......++++++++++++..++...+.++.+|+++.+.......+....... ...+.+.|.++ .+.+. +......
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~ 249 (377)
T TIGR00890 172 LGAFLIGYPPGQLIKTNIEVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLL-LIGLYKPYGQS-LGLSDGFLVLAVSIS 249 (377)
T ss_pred HHHHheecCchhccccCcccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHH-HHHHHHHHHHH-cCCCHHHHHHHHHHH
Confidence 3322222222111111110111112345677888877665544443333333 23444555443 33333 4566777
Q ss_pred HHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHH
Q 018113 291 MLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLL 328 (360)
Q Consensus 291 ~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 328 (360)
.++.+++++..+++.||++||+ .+..+.....+...
T Consensus 250 ~~~~~~~~~~~g~l~dr~g~~~--~~~~~~~~~~~~~~ 285 (377)
T TIGR00890 250 SIFNGGGRPFLGALSDKIGRQK--TMSIVFGISAVGMA 285 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhhhh--hhhHHHHHHHHHHH
Confidence 8889999999999999999884 34444444444333
No 12
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.94 E-value=5.8e-24 Score=197.95 Aligned_cols=267 Identities=20% Similarity=0.217 Sum_probs=168.2
Q ss_pred HHHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhh----hHH--HHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHH
Q 018113 40 NNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGE----IGQ--LFIAGFGSSMLFGTIVGSLADKQGRKRACVTYC 109 (360)
Q Consensus 40 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~----~g~--~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~ 109 (360)
+..+..+.+..+.+++| +...|.+.++++.+.++ ++. .++..+++..+++++.|+++||+|||+++..+.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 34555667777888888 23478888888644322 222 256777888899999999999999999999999
Q ss_pred HHHHHHH-HHHhcchHHH--------HHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHH
Q 018113 110 LTYILSC-ITKHSPQYKI--------LMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGL 177 (360)
Q Consensus 110 ~~~~~~~-l~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~ 177 (360)
++++++. ++++++|+.. ++++|+++|++.|..++.... +++|+ ++|++..+...... .+|..+
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~-~~~e~~p~~~Rg~~~~~~~~~~----~~G~~l 169 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASI-FVAEYSPDRKRGFMGSWLDFGS----IAGFVL 169 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHH-HHHHhCCCCCCcHHHHHHHHHH----HHHHHH
Confidence 9999987 8899999874 789999999999999998855 88887 56777544443333 334434
Q ss_pred HHHHHhhhhhhhhc--ccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCcch---h-HH----HHHHHHHHHHhc-c
Q 018113 178 VAILSGLFGNLLVD--SFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESK---D-LL----TQFRGAAVAIAS-D 246 (360)
Q Consensus 178 g~~~~~~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~----~~~~~~~~~~~~-~ 246 (360)
|..+...+...+.+ ...|+||..|++...+.++..++. ...||++...++.+ + .. ++.+.+.+++++ +
T Consensus 170 g~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~-~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (490)
T PRK10642 170 GAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLR-HALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKH 248 (490)
T ss_pred HHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHH-HcCCCChhHHHHHHhhhhhccccccccccCCHHHHHHHh
Confidence 44443333332211 124778888888765555433332 34454321100000 0 00 000112333443 3
Q ss_pred hhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 247 EKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
++.+.......+.....++....|.|.|+++..+.+. ........++.+++.+..|+++||+|||+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 317 (490)
T PRK10642 249 WRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRP 317 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 3333333333232333344457789998876555544 34445557778889999999999999995
No 13
>PRK15075 citrate-proton symporter; Provisional
Probab=99.93 E-value=6.4e-24 Score=194.86 Aligned_cols=268 Identities=17% Similarity=0.242 Sum_probs=169.5
Q ss_pred hHHHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhhhHHHH-HH-----HHHHHhhhhhhhhhhhhhhcchHHHHHH
Q 018113 39 KNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLF-IA-----GFGSSMLFGTIVGSLADKQGRKRACVTY 108 (360)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~~g~~~-~~-----~~~~~~~~~~~~G~l~Dr~Grr~~l~~~ 108 (360)
+++.....++..+.+.+| ++..|.+.+|++.++.+.+... +. .++...+++++.|+++||+|||++++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 344566677778888888 4559999999999888765432 22 2333346778899999999999999999
Q ss_pred HHHHHHHH-HHHhcchHH--------HHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHH
Q 018113 109 CLTYILSC-ITKHSPQYK--------ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNG 176 (360)
Q Consensus 109 ~~~~~~~~-l~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~ 176 (360)
..+.+++. +++++++++ .++++|+++|++.+...+.... +++|. ++|++..+......+.+..+|..
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~-~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~ 171 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSV-YLAEIATPGRKGFYTSWQSASQQVAVVFAAL 171 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHH-HHHhhCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 99998877 888898877 4688999999999988787744 88886 67787666655555544444444
Q ss_pred HHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHH
Q 018113 177 LVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQ 256 (360)
Q Consensus 177 ~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (360)
+|..+.+.+.+...+ .++||.+|........+ ........||+++..++ +..++.++..++..++++.+......
T Consensus 172 ~g~~l~~~~~~~~~~--~~gWr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (434)
T PRK15075 172 LGYLLNQWLSPAQMA--EWGWRIPFLIGCLIVPF-IFLIRRSLEETEEFLAR--KHRPSMREIFRSLAANWRIVLAGMLM 246 (434)
T ss_pred HHHHHHHhCCHHHHh--ccchHHHHHHHHHHHHH-HHHHHHhcCCCHHHHHh--hhccccccHHHHHHHhHHHHHHHHHH
Confidence 444444433333223 35677777664333222 11111122221110000 00001111233344555555443333
Q ss_pred HHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 257 SLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
.+.....+.....|.|.|+++..+.+. +.......++++++.++.|+++||+|||+
T Consensus 247 ~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~ 305 (434)
T PRK15075 247 VAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRP 305 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH
Confidence 333333444467889999887656554 34455667888899999999999999985
No 14
>PRK09952 shikimate transporter; Provisional
Probab=99.93 E-value=9e-24 Score=193.91 Aligned_cols=263 Identities=19% Similarity=0.135 Sum_probs=161.6
Q ss_pred hHHHHHHHHHHHHHhhhhh----HHHHH-HHHhh--CCChhhhHHHH-----HHHHHHHhhhhhhhhhhhhhhcchHHHH
Q 018113 39 KNNYLLVYSLMMAGDWLQG----PYVYY-LYSTY--GFGKGEIGQLF-----IAGFGSSMLFGTIVGSLADKQGRKRACV 106 (360)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~--g~s~~~~g~~~-----~~~~~~~~~~~~~~G~l~Dr~Grr~~l~ 106 (360)
+++.....++....|++|. ...|. +.+++ +.++. .+.+. ...+++..+++++.|+++||+|||+++.
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~ 98 (438)
T PRK09952 20 ARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLM 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHH
Confidence 3456666777778888882 23443 44555 67666 35442 3556666788889999999999999999
Q ss_pred HHHHHHHHHH-HHHhcchHH--------HHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHH
Q 018113 107 TYCLTYILSC-ITKHSPQYK--------ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLG 174 (360)
Q Consensus 107 ~~~~~~~~~~-l~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g 174 (360)
.+.++++++. ++++++++. .++++|+++|++.|..++.... ++.|. ++|++..+.... |
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~-~~~e~~p~~~rg~~~~~~~~--------g 169 (438)
T PRK09952 99 LTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAAL-LAVESAPKNKKAFYSSGVQV--------G 169 (438)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHH-HHHHhCCCCCCcHHHHHHHH--------H
Confidence 9999999987 889999987 5888999999999999888755 88887 555553333322 2
Q ss_pred HHHHHHHHhhhhhhhhc------ccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCcchh--HHHHHHHHHHHHhcc
Q 018113 175 NGLVAILSGLFGNLLVD------SFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKD--LLTQFRGAAVAIASD 246 (360)
Q Consensus 175 ~~~g~~~~~~l~~~l~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 246 (360)
..+|..++..+...+.. ...|+||.+|.+.++..++..+.. ...||+++..+++++ ..++..+..+.++++
T Consensus 170 ~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~-~~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~ 248 (438)
T PRK09952 170 YGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVR-NGMEESAEFEQQQHEQAAAKKRIPVIEALLRH 248 (438)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHH-HhCCCChhHHHHHhhcccccccCCHHHHHHHc
Confidence 22333333322222211 124778888887766554433222 233333211010000 000001122345677
Q ss_pred hhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcchh---HHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 247 EKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHG---FIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
|+.+.......+.....++....|.|.|.++..+.+.. .......+..+++.++.|+++||+|||+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~ 317 (438)
T PRK09952 249 PGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRR 317 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchH
Confidence 77766544333333333333567888888776666654 2333445667788889999999999985
No 15
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.93 E-value=1.8e-24 Score=200.36 Aligned_cols=268 Identities=18% Similarity=0.061 Sum_probs=177.9
Q ss_pred ccchhHHHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHH
Q 018113 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (360)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 110 (360)
..|..+..+..+++.......+ ++..|.+.+|+|+|+++.|++.+...++..+++++.|+++||+|||+++..+.+
T Consensus 23 ~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~ 102 (467)
T PRK09556 23 WFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLI 102 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHH
Confidence 3344455555566665555555 455899999999999999999999999999999999999999999999988887
Q ss_pred HHHHHH-HH-----HhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHH
Q 018113 111 TYILSC-IT-----KHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAIL 181 (360)
Q Consensus 111 ~~~~~~-l~-----~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~ 181 (360)
+.++.. .. +.+++++.+++.|+++|++.+...+.... +++|+ ++|++..+......+ +|..+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~-~i~~~~~~~~rg~a~gi~~~~~~--------lG~~l 173 (467)
T PRK09556 103 LSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYS-TITRWTPRRKRGRFLGFWNISHN--------LGGAG 173 (467)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHH-HHHHHcCccceeeeEEeeecccc--------hhhhH
Confidence 776644 33 34689999999999999999988887755 78876 568886655444333 33344
Q ss_pred Hhhhhhhhhccc-CCCCchhhhhhHHHHHHHHHHHhhh---hccccCCCC------cc---hhH---HHH--HHH-HHHH
Q 018113 182 SGLFGNLLVDSF-SLGPVAPFDAAACFLAIGMVIILSS---WTENYGDPS------ES---KDL---LTQ--FRG-AAVA 242 (360)
Q Consensus 182 ~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~------~~---~~~---~~~--~~~-~~~~ 242 (360)
++.+..++.+.. +.+|+..|...+.+.++..+..... .||+.+..+ +. ++. .++ ..+ ..+.
T Consensus 174 ~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (467)
T PRK09556 174 AGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEY 253 (467)
T ss_pred HHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHH
Confidence 444333333321 1135555655444443332222222 222211000 00 000 000 011 1223
Q ss_pred HhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 243 IASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
.+|+|.++...+...+.....+. ...|.|.|+++..+.+. +.......++.++++++.|+++||+++|+
T Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~~-~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~ 325 (467)
T PRK09556 254 VLKNPVIWLLCFANIFLYIVRIG-IDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRR 325 (467)
T ss_pred HHcChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 68899999887776666655555 68899999987777765 35556677889999999999999999885
No 16
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.93 E-value=2.5e-23 Score=188.33 Aligned_cols=235 Identities=17% Similarity=0.226 Sum_probs=162.8
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
.+.+|.+.+|+|.++++.|...+...+...+++++.|+++||+|||+++..+.++.+++. ++.++++++.+++.|+++|
T Consensus 40 ~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 119 (394)
T PRK10213 40 VSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLG 119 (394)
T ss_pred HhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHH
Confidence 456899999999999999999999999999999999999999999999999999999877 7788899999999999999
Q ss_pred hHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 212 (360)
++.+...+.... ++.|. ++|++..+..... ..+|..+++.+++.+.+. ++|+..|+..+.+.++..
T Consensus 120 ~~~g~~~~~~~~-~i~~~~~~~~~~~a~~~~~~~--------~~~g~~ig~~l~~~l~~~--~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 120 LALGGFWAMSAS-LTMRLVPPRTVPKALSVIFGA--------VSIALVIAAPLGSFLGEL--IGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred HhhHHHHHHHHH-HHHHHcCHhHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHhh--cCHHHHHHHHHHHHHHHH
Confidence 999998887755 77776 4455533333322 224555555555555554 455667776665555444
Q ss_pred HHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhh-ccccCCCCCcch---hHHHH
Q 018113 213 VIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWT-PALSPNDEEIPH---GFIFA 288 (360)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~ 288 (360)
+......||+++++++. . ++..+.+|+|+++.......+.....+. ...+. |.|.+ +.+.+. +....
T Consensus 189 l~~~~~~p~~~~~~~~~---~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~-~~g~s~~~~g~~~~ 259 (394)
T PRK10213 189 FWIIKSLPSLPGEPSHQ---K----QNTFRLLQRPGVMAGMIAIFMSFAGQFA-FFTYIRPVYMN-LAGFGVDGLTLVLL 259 (394)
T ss_pred HHHHHHCCCCCcccccc---h----hHHHHHhcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-hcCCChhHHHHHHH
Confidence 44333345433211111 1 1233567888887765544444443333 24454 55554 334444 56667
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCC
Q 018113 289 TFMLASMLGSSLASRLMARSPPR 311 (360)
Q Consensus 289 ~~~~~~~~~~~~~g~l~dr~g~~ 311 (360)
...++.+++..+.+++.||.+++
T Consensus 260 ~~~~~~iig~~~~~~l~~r~~~~ 282 (394)
T PRK10213 260 SFGIASFVGTSLSSFILKRSVKL 282 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccchh
Confidence 77888999999999999995433
No 17
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.93 E-value=1.3e-23 Score=190.03 Aligned_cols=242 Identities=14% Similarity=0.098 Sum_probs=172.7
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
.|..|.+.+|+|.|+++.+++.+...++..+++++.|+++||+|||+++..+.++.+++. +..++++++.+.+.|++.|
T Consensus 25 ~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 104 (385)
T TIGR00710 25 LPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQA 104 (385)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 577899999999999999999999999999999999999999999999999999888877 7788899999999999999
Q ss_pred hHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 212 (360)
++.+...+.... ++.|. ++|++..+..... .. +|..+++.+++.+.+. ++|+..+...+.+.++..
T Consensus 105 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~----~g~~~g~~~~~~l~~~--~~~~~~~~~~~~~~~~~~ 173 (385)
T TIGR00710 105 FGASAGSVISQA-LVRDIYPGEELSRIYSILMPV----LA----LAPAVAPLLGGYILVW--LSWHAIFAFLSLAGILLS 173 (385)
T ss_pred cchhHHHHHHHH-HHHHhcCcHHHHHHHHHHHHH----HH----HHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHH
Confidence 999988787755 77776 4455533333322 22 4445555555555554 345666766655555444
Q ss_pred HHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHH
Q 018113 213 VIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFAT 289 (360)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 289 (360)
.......||+++++++. ..++..+..++.+|+|+++...+...+.....+. ...+.|.+.++..+.++ +.....
T Consensus 174 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~g~~~~~ 250 (385)
T TIGR00710 174 ALIFFILPETLPYEARI--QISTYFETFLLLLKSKMFWGYALIYGASFGGFFA-FFSGAPFVYIDIMGVSPSVFGLLFAL 250 (385)
T ss_pred HHHHHhCCCCCCCcccC--CHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHH-HHHcChHHHHHHcCCCHHHHHHHHHH
Confidence 44434445543332221 1222334556778899888776655554444444 45667777765555554 456667
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCh
Q 018113 290 FMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 290 ~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
..++.++++++.+++.||+++|+
T Consensus 251 ~~~~~~~~~~~~g~l~~~~~~~~ 273 (385)
T TIGR00710 251 NIIAMIFGGFLNGRFIKKWGAKS 273 (385)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHH
Confidence 78889999999999999999885
No 18
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.93 E-value=1.6e-23 Score=189.62 Aligned_cols=237 Identities=16% Similarity=0.180 Sum_probs=161.9
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
+|.+|.+.+|+|+|.++.|++.+...++..+++++.|+++||+|||+++..+..+.+++. ++++++|++.+++.|+++|
T Consensus 29 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~G 108 (393)
T PRK09705 29 GPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGG 108 (393)
T ss_pred chhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHH
Confidence 677999999999999999999999999999999999999999999999999999999988 8899999999999999999
Q ss_pred hHhhhhhhhhhhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 213 (360)
++.+...+.... ++.|+ ++|++.. .....+...|..+|+.+++.+ .++. .+||..+...+...++...
T Consensus 109 ig~~~~~~~~~~-~~~~~~~~~~~~~~----g~~~~~~~~g~~~g~~~~~~l----~~~~-~~w~~~~~~~~~~~~~~~~ 178 (393)
T PRK09705 109 VGIGIIQAVMPS-VIKRRFQQRTPLVM----GLWSAALMGGGGLGAAITPWL----VQHS-ETWYQTLAWWALPAVVALF 178 (393)
T ss_pred hHHHHHhhhhhH-HHHHHccccchhHH----HHHHHHHHHHHHHHHHHHHHH----HHhc-CCHHHHHHHHHHHHHHHHH
Confidence 999988777644 66665 4555533 333333344444555555443 3332 1344444333222222222
Q ss_pred HHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHH
Q 018113 214 IILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATF 290 (360)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 290 (360)
..... .+++++++++++ ...++.+++++.+.......+.....+. ...|.|.|.++ .+.+. +...+..
T Consensus 179 ~~~~~-~~~~~~~~~~~~------~~~~~~l~~~~~~~l~~~~~~~~~~~~~-~~~~lp~~l~~-~g~s~~~ag~~~~~~ 249 (393)
T PRK09705 179 AWWWQ-SAREVASSHKTT------TTPVRVVFTPRAWTLGVYFGLINGGYAS-LIAWLPAFYIE-IGASAQYSGSLLALM 249 (393)
T ss_pred HHHHH-hcCCCccccCCC------cCCcccccCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-cCCChhhhhHHHHHH
Confidence 22111 111111111111 0112345677777665555544444434 57788888876 45544 5677788
Q ss_pred HHHHHHHHHHHHHHHhhcCCCh
Q 018113 291 MLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 291 ~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
.++.+++++..+++.||+++|+
T Consensus 250 ~i~~i~g~~~~g~l~~r~~~~~ 271 (393)
T PRK09705 250 TLGQAAGALLMPAMARHQDRRK 271 (393)
T ss_pred HHHHHHHHHHHHHHHhhccchH
Confidence 8999999999999999999884
No 19
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.93 E-value=2.3e-23 Score=186.17 Aligned_cols=237 Identities=16% Similarity=0.133 Sum_probs=158.0
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHHHH-HhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCIT-KHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l~-~~~~~~~~l~~~r~l~G 135 (360)
+|.+|.+.+|+|+|+++.|++.+..+++..+++++.|+++||+|||+++..+......+.+. ...+|+..+++.|+++|
T Consensus 11 ~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G 90 (368)
T TIGR00903 11 SPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAA 90 (368)
T ss_pred HhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 57799999999999999999999999999999999999999999998876555444444433 33479999999999999
Q ss_pred hHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 212 (360)
++.+.. ..... .++|+ ++|++..+.... +..+|..+++.++..+.+. ++||..|...+.+.++..
T Consensus 91 ~g~~~~-~~~~~-~~~~~~~~~~r~~a~~~~~~--------~~~lG~~l~~~~~~~l~~~--~gWr~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 91 LGQPFL-LNAFA-PAASQIREERRDLVISLLSF--------AMYLGIIFALAAGLKIYTA--GGLQLLIIPIAAVAAAGI 158 (368)
T ss_pred hHhHHH-HHHHH-HHHHHcCHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHc--cchHHHHHHHHHHHHHHH
Confidence 999864 43334 44664 566664333332 3335555666666655554 456677777666655555
Q ss_pred HHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch--hHHHHHH
Q 018113 213 VIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH--GFIFATF 290 (360)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 290 (360)
++.....||+++++++..+ .++..++.++++|||.++.......+.....+. ..+|.|.|+++. +.+. +......
T Consensus 159 ~~~~~~lp~~p~~~~~~~~-~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~-~~~wlp~~L~~~-g~s~~~~~~~~l~ 235 (368)
T TIGR00903 159 ILVLAALPALPFQAAEGFG-FKDAVKEFGALAGRKDLWIIGAILGFGVALFDN-LAIWLEAALRPA-GLEDIAGDAVALA 235 (368)
T ss_pred HHHHHHcCCCCCCCCCCcc-hHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHC-CCChHHHHHHHHH
Confidence 5444556665433222111 112223466889999999988777777766666 588999999763 3443 2233333
Q ss_pred HHHHHHHHHHHHHHHhhcCCC
Q 018113 291 MLASMLGSSLASRLMARSPPR 311 (360)
Q Consensus 291 ~~~~~~~~~~~g~l~dr~g~~ 311 (360)
.+ .+.+..++++||..||
T Consensus 236 ~~---~g~~g~~~~~d~~~r~ 253 (368)
T TIGR00903 236 IL---AGLIGVAVIPDRVARA 253 (368)
T ss_pred HH---HHHHHHHHhhHHhhhh
Confidence 33 3444457888887654
No 20
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.93 E-value=2.6e-23 Score=192.56 Aligned_cols=247 Identities=15% Similarity=0.098 Sum_probs=165.0
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
.|+.|.+.+|+|+|.++.+.+.+...++..+++++.|+++||+|||+++..+.+..+++. +++++++++.++++|++.|
T Consensus 56 ~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G 135 (476)
T PLN00028 56 APLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIG 135 (476)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 577899999999999999998888888888888999999999999999999988888877 6788999999999999999
Q ss_pred hHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc---cCCCCchhhhhhHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS---FSLGPVAPFDAAACFLA 209 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~ 209 (360)
++.+... .... +++|+ ++|+...+..... ..+|..++..+.+.+...+.+. ...+||..|.+.+.+.+
T Consensus 136 ~~~~~~~-~~~~-~i~~~~~~~~rg~a~g~~~~~----~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l 209 (476)
T PLN00028 136 FSLATFV-SCQY-WMSTMFNGKIVGTANGIAAGW----GNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHI 209 (476)
T ss_pred HHHHhhH-HHHH-HHHHhcChhheeHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHH
Confidence 9887653 3323 56675 5677754443332 2344445555555444332221 01356677777666555
Q ss_pred HHHHHHhhhhccccCCCC--c----chhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch
Q 018113 210 IGMVIILSSWTENYGDPS--E----SKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH 283 (360)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (360)
+..+... ..++++++.+ + .+...++..+..++.+++++++.......+.....+. ...+.|.|+.+..+.+.
T Consensus 210 ~~~l~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~l~~~~g~s~ 287 (476)
T PLN00028 210 IMGILVL-TLGQDLPDGNYRELKKSGTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELT-MDNIIAEYFYDRFGLSL 287 (476)
T ss_pred HHHHHHH-HHcCcCCCCchhhHHhcCccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHH-HHhHHHHHHHHhcCCCH
Confidence 4444432 2222221110 0 0000111123345667888888766655444333333 46778888766666655
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 018113 284 ---GFIFATFMLASMLGSSLASRLMARSPPR 311 (360)
Q Consensus 284 ---~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 311 (360)
+...+...++.++++++.|+++||++||
T Consensus 288 ~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r 318 (476)
T PLN00028 288 ETAGAIAASFGLMNLFARPAGGYLSDVAARR 318 (476)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 4566677888999999999999999865
No 21
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.93 E-value=3.8e-23 Score=188.43 Aligned_cols=261 Identities=20% Similarity=0.211 Sum_probs=173.6
Q ss_pred cchhHHHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHH
Q 018113 36 NSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (360)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~ 111 (360)
.+++|..+..++...+.++++ ++..|.+.+|+|.|+++.|++.+...++..+++++.|+++||+|||+++..+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 89 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVAL 89 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 457777777777777777776 4558999999999999999999999999999999999999999999999999988
Q ss_pred HHHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018113 112 YILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (360)
Q Consensus 112 ~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (360)
..++. ++.++++++.+++.|++.|++.+...+.... ++.|. ++|++..+.... +..+|..+++.++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~--------~~~~g~~~~~~~~~ 160 (406)
T PRK11551 90 FGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIA-LTSEAVGPRLRGTAVSLMYC--------GVPFGGALASVIGV 160 (406)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHH-HHHHHcCHHHHHHHHHHHHH--------HHHHHHHHHHHHHH
Confidence 88876 7788899999999999999999988877755 77776 456664433322 23345555555555
Q ss_pred hhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCc--chhHHHHHHHHHHHHhc---chhHHHHHHHHHHHHhh
Q 018113 188 LLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSE--SKDLLTQFRGAAVAIAS---DEKIALLGAIQSLFEGS 262 (360)
Q Consensus 188 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 262 (360)
.+.+. ++|+..+++.+.+.++.........||+++++++ +++..++. .+...+ +++.+.......+...
T Consensus 161 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~- 234 (406)
T PRK11551 161 LAAGD--AAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAPV---LRALFGEGRATATLLLWISYFFTLI- 234 (406)
T ss_pred HHccc--cCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhhh---HHHHhhhhhhhHHHHHHHHHHHHHH-
Confidence 44443 4566667665554444433332334443221111 11111111 111222 2222222222222222
Q ss_pred HHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 263 MYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
.......|.|.+.++. +.+. +.......++.++++++.|++.||+++|+
T Consensus 235 ~~~~~~~~~p~~~~~~-g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 286 (406)
T PRK11551 235 VLYFLLNWLPSLLVGQ-GLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRR 286 (406)
T ss_pred HHHHHHHHHHHHHHhC-CCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 2233566788887653 4433 56677778899999999999999999885
No 22
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.93 E-value=3.8e-23 Score=185.49 Aligned_cols=259 Identities=14% Similarity=0.118 Sum_probs=176.4
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhc
Q 018113 43 LLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS 121 (360)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~ 121 (360)
....++..+.++...+.+|.+.+|++.++.+.|++.+...++..+.+++.|+++||+|||+++..+.++.+++. +..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 34445555556666677888999999999999999999999999999999999999999999999988887765 55555
Q ss_pred c-----hHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccc
Q 018113 122 P-----QYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF 193 (360)
Q Consensus 122 ~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~ 193 (360)
+ +++.+++.|++.|++.+...+...+ ++.|. ++|++..+...... . +|..+++.+++.+.+..
T Consensus 85 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~----~g~~~g~~l~~~l~~~~ 155 (365)
T TIGR00900 85 ALLGGLNIWQVYVLAGILAIAQAFFTPAYQA-MLPDLVPEEQLTQANSLSQAVR----S----LFYIVGPGIGGLMYATL 155 (365)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCHHHHHHHHhHHHHHH----H----HHHHHHHHHHHHHHHHh
Confidence 5 8999999999999999988887755 77776 45555433333322 2 44455555555555544
Q ss_pred CCCCchhhhhhHHHHHHHHHHHh-hhhccccCCCCcc-h-hHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhh
Q 018113 194 SLGPVAPFDAAACFLAIGMVIIL-SSWTENYGDPSES-K-DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLW 270 (360)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (360)
+ |+..+...+...++...... .+.||++++++++ + +..++.++..++.+|+|+++.......+...........+
T Consensus 156 g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (365)
T TIGR00900 156 G--IKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVAL 233 (365)
T ss_pred h--HHHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 55666655544444333332 2223322211111 1 2233344556678888888876665555544444433367
Q ss_pred hccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 271 TPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 271 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
.|.+.++..+.+. +.......++.+++.+..+++.||.+||+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 278 (365)
T TIGR00900 234 FPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMA 278 (365)
T ss_pred hHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhH
Confidence 7877766445444 56667778889999999999999998884
No 23
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.93 E-value=3e-23 Score=187.35 Aligned_cols=249 Identities=14% Similarity=0.109 Sum_probs=169.1
Q ss_pred HHHHHHHHhhhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcch
Q 018113 45 VYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQ 123 (360)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~ 123 (360)
..+.....+....+.+|.+.+|+|.|.++.|++.+...++..+++++.|+++||+|||+++..+.++.+++. ++++++|
T Consensus 11 ~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~ 90 (382)
T PRK10091 11 GTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSS 90 (382)
T ss_pred HHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCc
Confidence 333344444445678999999999999999999999999999999999999999999999999999999987 7889999
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchh
Q 018113 124 YKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAP 200 (360)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~ 200 (360)
++.+++.|++.|++.+...+.. ..++.|. ++|++..+ .. ..+..++..+++.+++.+.+. ++||..
T Consensus 91 ~~~l~~~r~l~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~----~~~~~~g~~~g~~l~~~l~~~--~gwr~~ 159 (382)
T PRK10091 91 YLMLAIGRLVSGFPHGAFFGVG-AIVLSKIIKPGKVTAAVA----GM----VSGMTVANLLGIPLGTYLSQE--FSWRYT 159 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHHH-HHHHHHhCChHHhhHHHH----HH----HHHHHHHHHHhccHHHHHhhh--ccHHHH
Confidence 9999999999999998877665 4366665 23333222 22 234445666666666666554 456677
Q ss_pred hhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCC
Q 018113 201 FDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE 280 (360)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (360)
|.+.+.+..+..+......||.++++++ + .+ +. .+.+|+++.+.......+.....+. ...+.+.+.++..+
T Consensus 160 f~~~~~~~~~~~~~~~~~lp~~~~~~~~--~-~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g 231 (382)
T PRK10091 160 FLLIAVFNIAVLASIYFWVPDIRDEAKG--G-LR---EQ-FHFLRSPAPWLIFAATMFGNAGVFA-WFSYIKPYMMFISG 231 (382)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCccccc--C-HH---HH-HHHhcChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcC
Confidence 7776665554444333345554322111 1 11 11 1345666666554433333323333 24455556655445
Q ss_pred cch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 281 IPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 281 ~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
.++ +.......++.++++++.+++.||+++|+
T Consensus 232 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~ 266 (382)
T PRK10091 232 FSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLR 266 (382)
T ss_pred CCHHHHHHHHHHHHHHHHHHhHHHheeccccCchh
Confidence 544 46667778899999999999999999884
No 24
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.93 E-value=6.1e-23 Score=187.00 Aligned_cols=243 Identities=16% Similarity=0.207 Sum_probs=166.4
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
.|.+|.+.+|+|.|+.+.+...+...++..+.+++.|+++||+||||++..+....+++. ++.++++++.+++.|+++|
T Consensus 33 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 112 (406)
T PRK15402 33 QPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQG 112 (406)
T ss_pred hcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 466888999999999999999999999899999999999999999999999998888877 7788899999999999999
Q ss_pred hHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 212 (360)
++.+...+.... .+.|. ++|.+..+. .. . +..++..++|.+++.+.+..+| +..+++.+.+.++..
T Consensus 113 ~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~----~~---~-~~~~~~~~g~~i~~~l~~~~~w--~~~~~~~~~~~~~~~ 181 (406)
T PRK15402 113 IGLCFIGAVGYA-AIQESFEEADAIKITAL----MA---N-VALLAPLLGPLVGAALIHVLPW--RGMFVLFAALAALSF 181 (406)
T ss_pred hHhhhHHHHHHH-HHHHHhChhHHHHHHHH----HH---H-HHHHHHHHHHHHHHHHHHccCc--cHHHHHHHHHHHHHH
Confidence 998887666644 66665 222221111 11 1 2224556666666666665454 456666555555444
Q ss_pred HHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHH
Q 018113 213 VIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFAT 289 (360)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 289 (360)
.......||++++++++ ...++..++.+++++||+++.......+....... ...+.|.+.++..+.++ +.....
T Consensus 182 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~g~~~~~~g~~~~~ 259 (406)
T PRK15402 182 FGLWRAMPETAGRVGEK-LSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLA-WIALSPVILISGEQLSSYEYGLLQVP 259 (406)
T ss_pred HHHHHhCCCCCcccccc-ccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH-HHHHhHHHHHHHhCCCHHHHHHHHHH
Confidence 44433445543322221 11233445567789999988876655554433333 34556777665555554 344444
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCh
Q 018113 290 FMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 290 ~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
..++.+++.++.+++.||+++|+
T Consensus 260 ~~~~~~~g~~~~g~l~~r~~~~~ 282 (406)
T PRK15402 260 VFGALIAGNLTLARLTSRRPLRS 282 (406)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHH
Confidence 56678889999999999998874
No 25
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.93 E-value=2.4e-23 Score=191.00 Aligned_cols=260 Identities=10% Similarity=0.024 Sum_probs=173.3
Q ss_pred hhHHHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHH
Q 018113 38 FKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYI 113 (360)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~ 113 (360)
.++......++..+...++ .+.+|.+.+++|+|+++.|.+.+...++..+++++.|+++||+|||+++.++.++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~ 99 (434)
T PRK11663 20 WRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATG 99 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHH
Confidence 3444444444555544443 456999999999999999999999999999999999999999999999999999999
Q ss_pred HHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 018113 114 LSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLL 189 (360)
Q Consensus 114 ~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l 189 (360)
++. +.+++++++.+++.|++.|++.+..++.... ++.|+ ++|++..+..... ..+|..+++.+.+.+
T Consensus 100 ~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~-~~~~~~~~~~rg~~~~~~~~~--------~~~g~~~~~~~~~~l 170 (434)
T PRK11663 100 IINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAK-LLTAWYSRTERGGWWAIWNTA--------HNVGGALIPLVVGAI 170 (434)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHH-HHHHhCCHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHH
Confidence 877 7788999999999999999999888777755 77776 4566644333332 225555555555665
Q ss_pred hcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCC---------Ccch---hHHH----HHHHHH-HHHhcchhHHHH
Q 018113 190 VDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP---------SESK---DLLT----QFRGAA-VAIASDEKIALL 252 (360)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~---~~~~----~~~~~~-~~~~~~~~~~~~ 252 (360)
.+. ++||..|.+.+++.++..+......+|++++. ++++ +..+ +.++.. +..+++++++..
T Consensus 171 ~~~--~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (434)
T PRK11663 171 ALH--YGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLL 248 (434)
T ss_pred HHc--ccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHH
Confidence 554 45666676655544333222222223221100 0000 0000 011111 135677888876
Q ss_pred HHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcC
Q 018113 253 GAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSP 309 (360)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g 309 (360)
.....+....... ...|.|.|+++..+.+. +...+...+++++++++.|+++||+.
T Consensus 249 ~~~~~~~~~~~~~-~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~ 307 (434)
T PRK11663 249 SFSYVLVYVVRAA-INDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLF 307 (434)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhc
Confidence 6555544444333 57789999876666654 45667778889999999999999983
No 26
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.93 E-value=8e-23 Score=187.48 Aligned_cols=263 Identities=16% Similarity=0.140 Sum_probs=173.4
Q ss_pred chhHHHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHH
Q 018113 37 SFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY 112 (360)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~ 112 (360)
++++..+..+.+..+.++++ .+..|.+.+++|+|+.+.+.+.+...++..+++++.|+++||+|||+++..+.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~ 93 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 45555566666666777666 35588999999999999999999999999999999999999999999999999999
Q ss_pred HHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 018113 113 ILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL 188 (360)
Q Consensus 113 ~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (360)
+++. +++++++++.++++|++.|++.+..++.... ++.|. ++|++..+... .+..+|..+++.+...
T Consensus 94 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~-~~~~~~~~~~r~~~~~~~~--------~~~~lg~~~~~~l~~~ 164 (426)
T PRK12307 94 SVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACAST-YAVESWPKHLKSKASAFLV--------SGFGIGNIIAAYFMPS 164 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHH-HHHHhCCHhHhhHhhhHHH--------HHHhHHHHHHHHHHHH
Confidence 9987 7788999999999999999999988887755 77775 55666443332 2333555666666655
Q ss_pred hhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCC-----Ccc---hhHHHHHHHHHHHHhcchhHHHHHHHHHH--
Q 018113 189 LVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP-----SES---KDLLTQFRGAAVAIASDEKIALLGAIQSL-- 258 (360)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 258 (360)
+.+.. +|+..+++.....++.. ......||+++.+ ++. ++..+..+...++++++++++........
T Consensus 165 l~~~~--~w~~~f~i~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (426)
T PRK12307 165 FAEAY--GWRAAFFVGLLPVLLVI-YIRARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLF 241 (426)
T ss_pred HcccC--CHHHHHHHHHHHHHHHH-HHHHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHH
Confidence 55544 45566655433322222 2212233322100 000 00001111244567777776543322211
Q ss_pred HHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 259 FEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
...........+.|.|.++. +.+. +...+...++.++++++.+++.||++||+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~ 297 (426)
T PRK12307 242 SIFGANWPIFGLLPTYLAGE-GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKK 297 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 11111112456778777654 4443 45566778889999999999999999884
No 27
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.92 E-value=3.8e-23 Score=186.53 Aligned_cols=247 Identities=14% Similarity=0.129 Sum_probs=173.0
Q ss_pred hhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHH
Q 018113 54 WLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRI 132 (360)
Q Consensus 54 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~ 132 (360)
.+..|.+|.+.+++|+|+++.+.+.+...++..+++++.|+++||+|||+++..+.++.+++. ++.++++++.+.+.|+
T Consensus 8 ~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 87 (377)
T PRK11102 8 DMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRF 87 (377)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 334588999999999999999999999999999999999999999999999999999988877 7788899999999999
Q ss_pred HHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHH
Q 018113 133 LGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLA 209 (360)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 209 (360)
+.|++.+...+...+ ++.|. ++|++..+.... +..+|..+++.+++.+.+. ++|+..+.+.+.+..
T Consensus 88 l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~~~g~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~ 156 (377)
T PRK11102 88 LHGLAAAAASVVINA-LMRDMFPKEEFSRMMSFVTL--------VMTIAPLLAPIIGGWLLVW--FSWHAIFWVLALAAI 156 (377)
T ss_pred HHHHHHHHHHHHHHH-HHHHhcCHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHH--cChHHHHHHHHHHHH
Confidence 999999888777755 77765 445554333222 2234555556665555554 355667766666555
Q ss_pred HHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHH
Q 018113 210 IGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFI 286 (360)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 286 (360)
+.........||+++++++++...++..++.++.+++|+.+.......+.....+. ...+.|.+..+..+.++ +..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~g~~ 235 (377)
T PRK11102 157 LAAALVFFFIPETLPKERRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFS-FLTAGPFVYIELNGVSPQNFGYY 235 (377)
T ss_pred HHHHHHHHhCCccCcccccCCCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH-HHHcCHHHHHHHhCCCHHHHHHH
Confidence 55444434445543332222222222334455778888887765554444443333 34556666655455444 566
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 287 FATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 287 ~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
.....++.+++++..+++.||+|+|+
T Consensus 236 ~~~~~~~~~~~~~~~g~l~~r~g~~~ 261 (377)
T PRK11102 236 FALNIVFLFVMTIINSRFVRRVGALN 261 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 67778889999999999999999885
No 28
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.92 E-value=8.8e-23 Score=183.40 Aligned_cols=255 Identities=16% Similarity=0.181 Sum_probs=165.8
Q ss_pred HHHHhhhh-hHHHHH-HHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcc-hH
Q 018113 49 MMAGDWLQ-GPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSP-QY 124 (360)
Q Consensus 49 ~~~~~~~~-~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~-~~ 124 (360)
..+..... .|..|. +.+++|+|+.+.+++.+...++..+.+++.|+++||+|||+.+..+.++..++. ++++++ ++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~ 91 (366)
T TIGR00886 12 LSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSY 91 (366)
T ss_pred HHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 33333333 677885 889999999999999999999999999999999999999999999999999877 778888 99
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc------ccCC
Q 018113 125 KILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD------SFSL 195 (360)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~------~~~~ 195 (360)
+.+++.|+++|++.+.. +...+ +++|. ++|++..+..... ..+|..+++.+++.+...+.+ ..+|
T Consensus 92 ~~~~~~~~~~g~~~~~~-~~~~~-~~~~~~~~~~r~~~~~~~~~~----~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w 165 (366)
T TIGR00886 92 SVLLLLRLFIGIAGGSF-ASCMP-WISFFFPKKIQGTALGLAAGW----GNMGGGVAQFVMPPIIGSLIFGAGLPAHLAW 165 (366)
T ss_pred HHHHHHHHHHHHhchhh-HhHHH-HHHHhcCHhhhhHHHHHHHHH----hHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 99999999999986544 54545 67775 5566644443333 334555555555555443322 1245
Q ss_pred CCchhh-hhhHHHHHHHHHHHhhhhccccCCCCc-chhHH--------HHHHHHHHHHhcchhHHHHHHHHHHHHhhHHH
Q 018113 196 GPVAPF-DAAACFLAIGMVIILSSWTENYGDPSE-SKDLL--------TQFRGAAVAIASDEKIALLGAIQSLFEGSMYT 265 (360)
Q Consensus 196 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (360)
+ +.+ ...+.+..+.........+|+++++++ ++... ++..+...+.+++|+++.......+.....+.
T Consensus 166 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (366)
T TIGR00886 166 G--WAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLG 243 (366)
T ss_pred c--chhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHH
Confidence 5 445 222222222222221222222111111 00000 01111345677888887766655554444444
Q ss_pred HHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 266 FVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
...+.|.|.++..+.+. +.......+.+++++++.+++.||+|+|+
T Consensus 244 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~ 292 (366)
T TIGR00886 244 -VSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGAR 292 (366)
T ss_pred -HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccch
Confidence 56788888877666554 45566677788899999999999999985
No 29
>PRK03699 putative transporter; Provisional
Probab=99.92 E-value=7.7e-23 Score=185.47 Aligned_cols=254 Identities=12% Similarity=0.077 Sum_probs=166.4
Q ss_pred HHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 018113 41 NYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC 116 (360)
Q Consensus 41 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 116 (360)
+....+++..+.++.+ ++.+|++.+++|+|+++.+.+.+...++..+++++.|++.||+|||+++..+.++.+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~ 86 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAV 86 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3444444444444443 466899999999999999999999999888999999999999999999999998888877
Q ss_pred -HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc
Q 018113 117 -ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS 192 (360)
Q Consensus 117 -l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~ 192 (360)
++.++++++.+++.|+++|++.+...+...+ ++.|. ++|+...+.... +..++..++|.+.+.+.+.
T Consensus 87 ~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~-~i~~~~~~~~r~~~~~~~~~--------~~~~g~~~~~~~~~~l~~~ 157 (394)
T PRK03699 87 AGLMFSHSLALFSIAMFVLGVVSGITMSIGTF-LITHVYEGKQRGSRLLFTDS--------FFSMAGMIFPIIAAYLLAR 157 (394)
T ss_pred HHHHHcchHHHHHHHHHHHHHhhHhhccchhH-HhhhhcccchHHHHHHHHHH--------HHHHHHHHHHHHHHHHHhc
Confidence 7788999999999999999999888776645 66665 334442222211 2224445555555444331
Q ss_pred cCCCCchhhhhhHHHHHHHHHHHhh-hhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhh
Q 018113 193 FSLGPVAPFDAAACFLAIGMVIILS-SWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWT 271 (360)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (360)
.++||..|...+.+.++..++... ..|+.+++++++++ +. .++ ..+++++.......+.....+. ...|.
T Consensus 158 -~~gw~~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~----~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 228 (394)
T PRK03699 158 -SIEWYWVYACIGLVYVAIFILTLFSEFPALGKHAPKADK--PV----AKE-KWGIGVLFLAIAALLYILAQLT-FISWV 228 (394)
T ss_pred -cccHHHHHHHHHHHHHHHHHHHHhcCCccccccCccccC--cc----ccc-cCChHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 245667776655554443333222 22221111111100 00 011 2235555544444444444444 57899
Q ss_pred ccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 272 PALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 272 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
|.|.+++.+.+. +...+...++..+++++.++++||+++|+
T Consensus 229 p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 272 (394)
T PRK03699 229 PEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQR 272 (394)
T ss_pred HHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhh
Confidence 999977666655 45667777889999999999999999985
No 30
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.92 E-value=3.1e-22 Score=182.29 Aligned_cols=241 Identities=15% Similarity=0.126 Sum_probs=166.6
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
.|.+|.+.+++|.|.++.++..+..+++..+++++.|+++||+|||+++..+.++.+++. ++.+++|++.++++|+++|
T Consensus 36 ~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G 115 (413)
T PRK15403 36 QPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQG 115 (413)
T ss_pred ccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 577889999999999999999999999999999999999999999999999999988877 7788999999999999999
Q ss_pred hHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 212 (360)
++.+...+.. ..++.|. ++|++..+. .... ..+++.+++.+++.+.++ ++|+..|++.+.+.++..
T Consensus 116 i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~g~~lg~~l~~~--~gw~~~f~~~~~~~~i~~ 184 (413)
T PRK15403 116 TSICFIATVG-YVTVQEAFGQTKGIKLMAI----ITSI----VLVAPIIGPLSGAALMHF--VHWKVLFAIIAVMGLIAF 184 (413)
T ss_pred HHHHHHHHHH-HHHHHHhcCHHHHHHHHHH----HHHH----HHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHH
Confidence 9987654444 3356665 233342222 2222 224455555555555544 456677877766666555
Q ss_pred HHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcchh---HHHHH
Q 018113 213 VIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHG---FIFAT 289 (360)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 289 (360)
+......||++++++++. ..++..++.++++|||+++.......+.....+. ...+.|.+.++..+.++. .....
T Consensus 185 ~~~~~~lp~~~~~~~~~~-~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~-~~~~~P~~l~~~~g~s~~~~gl~~~~ 262 (413)
T PRK15403 185 VGLLLAMPETVKRGAVPF-SAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMS-WVAVSPVILIDAGGMTTSQFAWTQVP 262 (413)
T ss_pred HHHHHhCCCCccccCCCC-ChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH-HHHhChHHHHHhcCCCHHHHHHHHHH
Confidence 544345566543322211 1223344567889999999877666555554444 466788888877776653 44444
Q ss_pred HHHHHHHHHHHHHHHHhhcCC
Q 018113 290 FMLASMLGSSLASRLMARSPP 310 (360)
Q Consensus 290 ~~~~~~~~~~~~g~l~dr~g~ 310 (360)
...+.++++.+.+++.+|..+
T Consensus 263 ~~~~~~i~~~l~~~~~~~~~~ 283 (413)
T PRK15403 263 VFGAVIVANAIVARFVKDPTE 283 (413)
T ss_pred HHHHHHHHHHHHHHHhccCCc
Confidence 566677777777776654443
No 31
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.92 E-value=4.3e-23 Score=192.48 Aligned_cols=258 Identities=17% Similarity=0.206 Sum_probs=176.5
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
.+.+|.+.+++|.|.++.+++.+...++..++.++.|+++||+|||+++..+.++..++. ++++++|++.+++.|+++|
T Consensus 22 ~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G 101 (485)
T TIGR00711 22 NVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQG 101 (485)
T ss_pred HHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 566999999999999999999999999999999999999999999999999999999977 7888999999999999999
Q ss_pred hHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 212 (360)
++.+...+.... ++.|. ++|++..+.. . .+..+|..+++.+++++.++.+|+ +.|+....+.++..
T Consensus 102 ~~~~~~~~~~~~-~i~~~~~~~~r~~~~~~~----~----~~~~~g~~~g~~~~~~l~~~~~w~--~~f~~~~~~~~~~~ 170 (485)
T TIGR00711 102 FGGGPLIPLSFS-TLLNIYPPEKRGRAMAIW----G----LTVLVAPALGPTLGGWIIENYHWR--WIFLINVPIGIIVV 170 (485)
T ss_pred hhhhhHHHHHHH-HHHHHCCHHHHHHHHHHH----H----HHHHHHhhhhhccHhHhccCcCce--ehhhhhhHHHHHHH
Confidence 999988887755 77776 4455533322 2 233456667777777777665555 55655554444444
Q ss_pred HHHhhhhccccCCCCcchhHH----------------------------------------------HHHH--H--HHHH
Q 018113 213 VIILSSWTENYGDPSESKDLL----------------------------------------------TQFR--G--AAVA 242 (360)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~--~--~~~~ 242 (360)
.......||++++++++.+.. ++.+ + ...+
T Consensus 171 ~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (485)
T TIGR00711 171 VVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLR 250 (485)
T ss_pred HHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHH
Confidence 333333343322211110000 0000 0 0124
Q ss_pred HhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHH
Q 018113 243 IASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIV 319 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 319 (360)
++|+|+++.......+.....+. ...+.|.|.++..+.++ +.......++.++++++.+++.||++||+ ....+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~--~~~~g 327 (485)
T TIGR00711 251 LFKYRNFTIGCVYMSLLGLGLYG-SFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRK--LVTIG 327 (485)
T ss_pred HHcCCChHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHH--HHHHH
Confidence 56777777665555554444444 46778888877666655 46666778889999999999999999884 44444
Q ss_pred HHHHHHHHH
Q 018113 320 FVVSSVSLL 328 (360)
Q Consensus 320 ~~~~~~~~~ 328 (360)
.....+...
T Consensus 328 ~~~~~~~~~ 336 (485)
T TIGR00711 328 LILYAVGFY 336 (485)
T ss_pred HHHHHHHHH
Confidence 444333333
No 32
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.92 E-value=2e-23 Score=186.44 Aligned_cols=254 Identities=24% Similarity=0.308 Sum_probs=170.3
Q ss_pred HHHHHHhhhhhHHHH-HHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchH
Q 018113 47 SLMMAGDWLQGPYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQY 124 (360)
Q Consensus 47 ~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~ 124 (360)
++..+......+..| .+.+++|.|+++.+++.+...++..+.+++.|+++||+|||+++..+.++.+++. +..++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~ 85 (352)
T PF07690_consen 6 FLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNF 85 (352)
T ss_dssp HHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhH
Confidence 344444455567788 8889999999999999999999999999999999999999999999999999985 55566777
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhh
Q 018113 125 KILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPF 201 (360)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~ 201 (360)
+.+++.|++.|++.+...+.... ++.|. ++|++..+.... +..+|..+++.+++.+.+..+ |+..+
T Consensus 86 ~~~~~~~~l~g~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~--------~~~~g~~~g~~l~~~l~~~~~--~~~~~ 154 (352)
T PF07690_consen 86 WLLLIARFLLGIGSGFFSPASNA-LIADWFPPEERGRAFGILSA--------GFSLGSILGPLLGGFLISYFG--WRWAF 154 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCTCCHHHHHHHHHH--------HHHHHHHHHHHHHHHCCCHCH--HCCHH
T ss_pred HHHhhhccccccccccccccccc-cccccchhhhhhhccccccc--------hhhhhhhcccchhhhhhhccc--ccccc
Confidence 79999999999999999888866 78876 355553333332 233555666666666655444 55667
Q ss_pred hhhHHHHHHHHHHHhhhhccccCCC--C-cchh---HHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhcccc
Q 018113 202 DAAACFLAIGMVIILSSWTENYGDP--S-ESKD---LLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS 275 (360)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (360)
++.+.+.++..++.....+++++++ + +.++ ..++..+..+.++++|.++.......+ ....+.....+.|.|.
T Consensus 155 ~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l 233 (352)
T PF07690_consen 155 LISAILSLIAAILFILFLPEPPPPRERESPKESESKKPKPLKPGFKSLFKNPVLWILLIAFFL-FFFVFSGFSFFLPLYL 233 (352)
T ss_dssp HHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--HHHCCCH-CTHHHHHHCCHHHHHHHHH-HHHHHHHHHHHHHHHC
T ss_pred ccccchhhhhhhhHhhhhhhcccccccccccccccccccccccccccccccchhhhhhhhhhH-HHHHHHHhhcccchhh
Confidence 7777776666554222223222211 1 1111 111111124566777766632222222 2223333678888887
Q ss_pred CCCCCcc-h---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 276 PNDEEIP-H---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 276 ~~~~~~~-~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
++..+.+ . +.......+.+++++++.+++.||+++|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 274 (352)
T PF07690_consen 234 QEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRR 274 (352)
T ss_dssp CHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 7766666 3 34567778888888999999999999874
No 33
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.92 E-value=3.8e-22 Score=180.98 Aligned_cols=241 Identities=15% Similarity=0.133 Sum_probs=164.6
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
.+.+|.+.+++|.|+++.++..+...++..+++++.|+++||+|||+.+..+.+...++. ++..+++++.+++.|+++|
T Consensus 23 ~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g 102 (392)
T PRK10473 23 LVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQG 102 (392)
T ss_pred hhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 577999999999999999999999998888999999999999999999999998888877 6778899999999999999
Q ss_pred hHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 212 (360)
++.+...+.... ++.|. ++|++..+..... ..++..+++.+++.+.+.. +|+..+.+.+.+.++..
T Consensus 103 ~~~~~~~~~~~~-~i~~~~~~~~r~~~~~~~~~~--------~~i~~~~~~~i~~~l~~~~--g~~~~~~~~~~~~~i~~ 171 (392)
T PRK10473 103 IGAGCCYVVAFA-ILRDTLDDRRRAKVLSLLNGI--------TCIIPVLAPVLGHLIMLKF--PWQSLFYTMAAMGILVL 171 (392)
T ss_pred hhhhHHHHHHHH-HHHHHcCHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHhCc--ChHHHHHHHHHHHHHHH
Confidence 998887776645 77765 4555533332222 2244455555555554443 45566666655555444
Q ss_pred HHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHH
Q 018113 213 VIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFAT 289 (360)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 289 (360)
.......+|++++++++++ +..+..++.+++++.+.......+....... ...+.|.+.+++.+.+. +.....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~ 247 (392)
T PRK10473 172 LLSLFILKETRPARAPAAS---SKPRENSESLLNRFFLSRLVITTLSVTVILT-FVNTSPVLLMEQMGFSRGEYAIIMAL 247 (392)
T ss_pred HHHHHHcCCCCCcccCCcc---chHHHHHHHHhCHHHHHHHHHHHHHHHHHHH-HHHhCHHHHHHHcCCCHHHHHHHHHH
Confidence 4443444554333221111 1122334567788776654444433333333 34556666655555554 455667
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCh
Q 018113 290 FMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 290 ~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
..++.+++.+..+++.||+|+|+
T Consensus 248 ~~~~~i~~~~~~~~l~~r~g~~~ 270 (392)
T PRK10473 248 TAGVSMTVSFSTPFALGIFKPRT 270 (392)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHH
Confidence 78888999999999999999884
No 34
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.91 E-value=6.2e-22 Score=179.99 Aligned_cols=265 Identities=13% Similarity=0.161 Sum_probs=169.5
Q ss_pred ccchhHHHHHHHHHHHHHhhhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHH
Q 018113 35 FNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL 114 (360)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~ 114 (360)
.+|.........++....++...++++.+.+|+|.|+++.|++.+...++..+++++.|+++||+||||++..+..+.++
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~ 90 (402)
T TIGR00897 11 IPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCV 90 (402)
T ss_pred CCchhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 34444444555556666666666777788899999999999999999999999999999999999999999999998887
Q ss_pred HH-HH---Hh-cchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHH-HHHhhh
Q 018113 115 SC-IT---KH-SPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVA-ILSGLF 185 (360)
Q Consensus 115 ~~-l~---~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~-~~~~~l 185 (360)
+. ++ +. .++++.+++.|++.|++.+...+.... .+.+. ++|++..+......+ +|. .+++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~~~--------~g~~~~g~~~ 161 (402)
T TIGR00897 91 GHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLV-WVVYNTKQDNLSSAVGWFWAVYS--------IGIGVFGSYY 161 (402)
T ss_pred HHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHH-HHHHhCCHHHHHHHHHHHHHHHH--------HHHHHHHHHH
Confidence 65 33 23 357888889999999998877665544 44443 667775554443333 332 344555
Q ss_pred hhhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCC-CCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHH
Q 018113 186 GNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD-PSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMY 264 (360)
Q Consensus 186 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (360)
++.+.+..+|+ ..++.......+.........++.+++ ++++++..++..+..++++|+|+++.......+.....+
T Consensus 162 ~~~l~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (402)
T TIGR00897 162 SSYAIPAFGEM--NTLWSALAFVLTGGVIALFSNKDIFTPQHMQTREKFSELGKAATILFTNPNVLLGGMVRIINTIGLF 239 (402)
T ss_pred HHhcccccchH--HHHHHHHHHHHHHHHHHHhccCCCCCcccccCCcchhhHHHHHHHHHcChhHHHHHHHHHHHHHHHH
Confidence 55555544432 222222111111111111112221111 111111122333445678899998877666555444444
Q ss_pred HHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 265 TFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
. ...|.|.|.++ .+.+. +.......+++.++++..|+++||++||+
T Consensus 240 ~-~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 288 (402)
T TIGR00897 240 G-FAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMN 288 (402)
T ss_pred H-HHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh
Confidence 4 57788988755 45544 34556667889999999999999999875
No 35
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.91 E-value=7e-22 Score=178.22 Aligned_cols=264 Identities=13% Similarity=0.055 Sum_probs=172.9
Q ss_pred HHHHHHHhhhh-hHHHHHHHH-hhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhc-
Q 018113 46 YSLMMAGDWLQ-GPYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS- 121 (360)
Q Consensus 46 ~~~~~~~~~~~-~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~- 121 (360)
.+...+..++. +|..+.+.+ |+|+|++|.+++.+...+.+.+..++.|++.||+|.|+++..+.++.++.. +.+++
T Consensus 42 ~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~ 121 (462)
T PRK15034 42 CLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAV 121 (462)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445444 676777766 899999999999999999999998999999999999999999999988876 66665
Q ss_pred ----chHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhccc
Q 018113 122 ----PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL-LVDSF 193 (360)
Q Consensus 122 ----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-l~~~~ 193 (360)
+|++.+++.|++.|++ +..++.... .++++ ++||+..+..... .+.|..++..+.|.+... +.+..
T Consensus 122 ~~~~~s~~~lli~r~l~Gig-g~~f~~~~~-~vs~wfp~~~rG~A~Gi~~g~----G~~G~~l~~~l~p~~i~~~l~~~~ 195 (462)
T PRK15034 122 QNPNTPFGIFIVIALLCGFA-GANFASSMG-NISFFFPKAKQGSALGINGGL----GNLGVSVMQLVAPLVIFVPVFAFL 195 (462)
T ss_pred cccCCCHHHHHHHHHHHHHH-HHhHHHHHH-HHHHHCCHhHhHHHHHHHHHH----HhhHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999998 556677756 67775 5577755554333 234444555555543321 11212
Q ss_pred CC-----------CCchhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhh
Q 018113 194 SL-----------GPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGS 262 (360)
Q Consensus 194 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
+| +|+..+.+..++.++..+......++.++ ++ +.. ++..+.+|+|+.|..++...+..+.
T Consensus 196 G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~-~~---~~~----~~~~~vlk~~~~Wllslly~~tFG~ 267 (462)
T PRK15034 196 GVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS-SR---ASI----ADQLPVLQRLHLWLLSLLYLATFGS 267 (462)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-cc---cCH----HHHHHHhCCCchhHHHHHHHHHHHH
Confidence 22 13444444444443333333222222211 11 111 2234679999999998888776655
Q ss_pred HHHHHHhhhccccCCCCCcchh-HHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHH
Q 018113 263 MYTFVFLWTPALSPNDEEIPHG-FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVS 326 (360)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 326 (360)
... ...+.|.|.++.++.... ....+..+...+.++++|+++||+|+++ .+........++
T Consensus 268 fvg-~s~~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~--vl~~~~i~~~i~ 329 (462)
T PRK15034 268 FIG-FSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVR--VTLINFIFMAIF 329 (462)
T ss_pred HHH-HHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchH--HHHHHHHHHHHH
Confidence 555 577899888776533222 2233446778888999999999999984 444444434433
No 36
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.91 E-value=2e-22 Score=180.38 Aligned_cols=250 Identities=18% Similarity=0.177 Sum_probs=163.1
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
+|.+|.+.+|+|.|+++.|+..+...++..+++++.|+++||+||||++..+.+...++. .+ .+++.+.+++.|++.|
T Consensus 20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g 98 (355)
T TIGR00896 20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIG 98 (355)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 678999999999999999999999999999999999999999999999999988877766 44 7788999999999999
Q ss_pred hHhhhhhhhhhhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 213 (360)
++.+...+.... ++.|. ++|++..+. ...+..+|. .+++.+...+.+..+.+||..|...+...++...
T Consensus 99 ~g~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~g~----~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~ 169 (355)
T TIGR00896 99 VGIAIINVLLPS-LIKRDFPQRVGLMTGL----YSMALMGGA----ALAAAATVPLAQHSGGHWQQALAWWALPALLALL 169 (355)
T ss_pred HHHHHHhccchH-HHHHhCcchhhHHHHH----HHHHHHHHH----HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Confidence 999887666534 66665 445553332 332333333 4444444444443333466666554443333222
Q ss_pred HHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHH
Q 018113 214 IILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATF 290 (360)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 290 (360)
.. .++.+++++++++.. +...++.+|+|+.+.......+.....+. ...|.|.|.++. +.+. +...+..
T Consensus 170 ~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lp~~~~~~-g~~~~~~g~~~~~~ 241 (355)
T TIGR00896 170 AW---IPQVRRRVAANQTTT---RLTPVRIWRSPLAWQVTVFFGLQSGLYYS-LIGWLPAILISH-GASAATAGSLLALM 241 (355)
T ss_pred HH---hhhhccccCCCCCCC---CCCCchhhcCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHc-CCCHHHHHHHHHHH
Confidence 22 222221111111000 01233567888887665554444344444 567888888653 5444 5677778
Q ss_pred HHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHH
Q 018113 291 MLASMLGSSLASRLMARSPPRVESYMQIVFVVSSV 325 (360)
Q Consensus 291 ~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 325 (360)
.++.+++++..|++.||+++|+ +..........+
T Consensus 242 ~~~~i~~~~~~g~l~dr~~~~~-~~~~~~~~~~~~ 275 (355)
T TIGR00896 242 QLAQAASALLIPALARRVKDQR-GIVAVLAVLQLV 275 (355)
T ss_pred HHHHHHHHHhHHHHHhhhccch-HHHHHHHHHHHH
Confidence 8899999999999999996543 334343333333
No 37
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.91 E-value=4.2e-22 Score=189.86 Aligned_cols=133 Identities=21% Similarity=0.255 Sum_probs=110.8
Q ss_pred ccchhHHHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHH
Q 018113 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (360)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 110 (360)
..+++|.++.++.+..+.++++ ++.+|.+.+++|++..+.+++.+..+++..++++++|+++||+|||++++++.+
T Consensus 161 ~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~li 240 (742)
T TIGR01299 161 HGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLS 240 (742)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 4567787777777887777776 455899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHH
Q 018113 111 TYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFS 168 (360)
Q Consensus 111 ~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~ 168 (360)
+.+++. +++++++++.++++|++.|++.+...+.... ++.|. ++|+...+.......
T Consensus 241 l~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~-~isE~~p~~~Rg~~~g~~~~~~~ 301 (742)
T TIGR01299 241 VNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFS-YFAEFLAQEKRGEHLSWLCMFWM 301 (742)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHHHH
Confidence 888876 7788999999999999999999999887755 88886 556664444443333
No 38
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.91 E-value=2e-22 Score=182.63 Aligned_cols=244 Identities=18% Similarity=0.146 Sum_probs=171.2
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
+...|.+.+++|.|+.+.+++.+...++..+++++.|+++||+|||+++..+.++.+++. +.+++++++.+++.|++.|
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 93 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLG 93 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 455788999999999999999999999999999999999999999999999999888877 7788899999999999999
Q ss_pred hHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 212 (360)
++.+...+.... ++.|. ++|++..+..... ..+|..+++.+++.+.+..+ |+..+...+.+.++..
T Consensus 94 ~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~--------~~~g~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 94 AAEAPFFPGIIL-IVASWFPASERATAVSIFNSA--------QGLGGIIGGPLVGWILIHFS--WQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHhhhhHHHH-HHHHhCCHHHHHHHHHHHHHh--------chHHHHHHHHHHHHHHHhCC--chHHHHHHHHHHHHHH
Confidence 999988887755 78876 4566543333322 23555566666665555544 5566666555544444
Q ss_pred HHHhhhhccccCCCCcc-hhHHH-----------------HHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccc
Q 018113 213 VIILSSWTENYGDPSES-KDLLT-----------------QFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (360)
Q Consensus 213 ~~~~~~~~~~~~~~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (360)
+......+|+++++++. ++..+ +..+..++.+++|+++.......+....... ...+.|.|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 241 (399)
T TIGR00893 163 VLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGF-FLTWFPTY 241 (399)
T ss_pred HHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHH-HHHHHHHH
Confidence 43322233322211110 00000 0011244677888888776665555554444 57788888
Q ss_pred cCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 275 SPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 275 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
.++..+.+. +.......++.+++.+..+++.||++||+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 242 LVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred HHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 877666554 46667778889999999999999999884
No 39
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.91 E-value=1.6e-21 Score=177.08 Aligned_cols=270 Identities=9% Similarity=0.041 Sum_probs=176.8
Q ss_pred HHhhhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHH---hcchHHH
Q 018113 51 AGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK---HSPQYKI 126 (360)
Q Consensus 51 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~---~~~~~~~ 126 (360)
+.++...|.+|.+++++|+|+.+.|++.+..+++..+++++.|++.||+|||+++..+.++.+++. +.. ..++++.
T Consensus 17 ~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~ 96 (410)
T TIGR00885 17 FANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTL 96 (410)
T ss_pred HHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHH
Confidence 334555788999999999999999999999999999999999999999999999999999998877 432 3468999
Q ss_pred HHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-----------
Q 018113 127 LMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS----------- 192 (360)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~----------- 192 (360)
+++.|++.|+|.+...+...+ ++.+. ++|++..+..+...+ +|..+|+.+++.+.....+.
T Consensus 97 ~l~~~~l~G~g~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~ 171 (410)
T TIGR00885 97 FLVGLFILTAGLGFLETAANP-YILVMGPESTATRRLNLAQSFNP----FGSIIGMVVAQQLILSNLPHQSQDVLDKLSP 171 (410)
T ss_pred HHHHHHHHHhhHHHHHhhhhH-HHHHHCCHhHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCCccchhhhhhhcCH
Confidence 999999999999999887766 65554 445554444444433 44445555544432111000
Q ss_pred ---------cCCCCchhhhhhHHHHHHHHHHHh-hhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhh
Q 018113 193 ---------FSLGPVAPFDAAACFLAIGMVIIL-SSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGS 262 (360)
Q Consensus 193 ---------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
...+||.+|.+.+.+.++..+... .+.|+.++++++ + ++.+++.++++|+|+++...+..++....
T Consensus 172 ~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~l~~f~yvg~ 247 (410)
T TIGR00885 172 EELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHSDAK--Q--ISFSASLSRLARIRHYREGVIAQFFYVGV 247 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc--c--ccchhhHHHHHhChhHHHHHHHHHHHHHH
Confidence 012477888776665554433331 223332211111 1 11222334678888888866666665555
Q ss_pred HHHHHHhhhccccCCCC-Ccch---hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHhHh
Q 018113 263 MYTFVFLWTPALSPNDE-EIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIV 332 (360)
Q Consensus 263 ~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 332 (360)
... ...+.+.|.++.. +.+. +...........+|+++++++.||+++|+ .+........++..+...
T Consensus 248 e~~-~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~--~l~i~~~~~~~~~ll~~~ 318 (410)
T TIGR00885 248 QIM-CWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHK--VLMAYAIIGMALCLGSIF 318 (410)
T ss_pred HHH-HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH--HHHHHHHHHHHHHHHHHH
Confidence 444 4677888876532 3322 23344555678899999999999998874 454555555444444433
No 40
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.90 E-value=3.5e-22 Score=172.37 Aligned_cols=274 Identities=18% Similarity=0.164 Sum_probs=188.3
Q ss_pred HHHHHHHHhhhh-hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcc
Q 018113 45 VYSLMMAGDWLQ-GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSP 122 (360)
Q Consensus 45 ~~~~~~~~~~~~-~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~ 122 (360)
.++...+..+.. +|..+.+.+|+|+|++|.+++.....+.+.+.-++.|.+.||+|.|++...+.++..+-+ ..+++.
T Consensus 21 ~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~ 100 (417)
T COG2223 21 LAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAV 100 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHc
Confidence 344444555544 677788889999999999999999999999999999999999999999999999988865 556654
Q ss_pred ---hHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCC-
Q 018113 123 ---QYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL- 195 (360)
Q Consensus 123 ---~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~- 195 (360)
+++.+++++++.|++.+.. ....+ +++++ +++|...++.. ..++|..+...++|.+... .++
T Consensus 101 ~~~~~~~ll~~gll~G~~GasF-av~m~-~~s~~fP~~~qG~AlGI~g-----~GN~G~av~q~~~P~v~~~----~g~~ 169 (417)
T COG2223 101 TYPSTWQLLVIGLLLGLAGASF-AVGMP-NASFFFPKEKQGLALGIAG-----AGNLGVAVAQLVAPLVAVA----FGFL 169 (417)
T ss_pred cCCchHHHHHHHHHHhccccee-hcccc-cccccCChhhhhHHHHHhc-----cccccHHHHHHHHHHHHHH----HhhH
Confidence 4559999999999986655 55556 77776 55566443333 3344555555555555443 342
Q ss_pred CCchhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhcccc
Q 018113 196 GPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS 275 (360)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (360)
.|+....+..+..++..+..+....+.++.+++.++..+ ...+.+.++++.|.+.+.+....++... +..+.|.|+
T Consensus 170 ~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~---~~~~~v~~~~~~W~lsllY~~tFG~Fvg-fs~~l~~~~ 245 (417)
T COG2223 170 AWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP---AQLKAVFSNKDTWLLSLLYFATFGGFVG-FSAYLPMYL 245 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch---hHHHHHhcCcchHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 244444444444333333332223222221111111111 3455788899999998888877666656 699999999
Q ss_pred CCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHhHhccC
Q 018113 276 PNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTIP 335 (360)
Q Consensus 276 ~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (360)
+++++.+. +.......+.+.+.++.+|+++||+|.+ |.....+....++.....+..+
T Consensus 246 ~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~--rv~~~~f~~~~~~~~~l~~~~~ 306 (417)
T COG2223 246 VTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGR--RVTLAVFVGMALAAALLSLFLT 306 (417)
T ss_pred HHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccch--hHHHHHHHHHHHHHHHHHcccc
Confidence 99998877 4566667778888999999999999988 4566666666666665555543
No 41
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.90 E-value=1.1e-21 Score=181.03 Aligned_cols=264 Identities=12% Similarity=0.102 Sum_probs=166.4
Q ss_pred ccchhHHHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHH
Q 018113 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (360)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 110 (360)
.++++|.++..+++.......+ ....|++.++ |+|+.+.|+..+...++..+++++.|+++||+|||++++.+.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~ 101 (452)
T PRK11273 23 YRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLI 101 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHH
Confidence 3445566555555554444443 3447888888 9999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HHHhc----chHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 018113 111 TYILSC-ITKHS----PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILS 182 (360)
Q Consensus 111 ~~~~~~-l~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~ 182 (360)
+.+++. ++++. ++++.+++.|++.|++.+..++.... .+.|. ++|++..+.... +..+|.. ..+
T Consensus 102 ~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~-~~~~~~~~~~r~~~~~~~~~----~~~~g~~---~~~ 173 (452)
T PRK11273 102 LAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGR-TMVHWWSQKERGGIVSVWNC----AHNVGGG---LPP 173 (452)
T ss_pred HHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHH-HHHHhCChHHHHHHHHHHHH----HHHhhhh---HHH
Confidence 888866 55554 46788899999999999888776645 55554 556664443322 2222221 222
Q ss_pred hhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCC---CCcch-------------hHHHHHHHH-HHHHhc
Q 018113 183 GLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD---PSESK-------------DLLTQFRGA-AVAIAS 245 (360)
Q Consensus 183 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------~~~~~~~~~-~~~~~~ 245 (360)
+.....+.... +|+..|++.+.+.++..++.....+|++++ +++++ +..++.++. .+.++|
T Consensus 174 ~l~~~~~~~~~--gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (452)
T PRK11273 174 LLFLLGMAWFN--DWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLP 251 (452)
T ss_pred HHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHc
Confidence 22211111112 455667665554444333332333332211 00000 000001111 224678
Q ss_pred chhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 018113 246 DEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPP 310 (360)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~ 310 (360)
++.++...+...+.....+. ...|.|.|++++.+.+. +.......++.+++.++.|+++||+++
T Consensus 252 ~~~~~~~~l~~~~~~~~~~~-~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~ 318 (452)
T PRK11273 252 NKLLWYIAIANVFVYLLRYG-ILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFR 318 (452)
T ss_pred ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 88888876666665555555 57899999987666554 455566678888999999999999943
No 42
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.90 E-value=1.9e-21 Score=175.35 Aligned_cols=255 Identities=18% Similarity=0.158 Sum_probs=159.1
Q ss_pred HHHHHHHHhhhhhHHHHH-HHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHH-HHHHHHHHH-HHHhc
Q 018113 45 VYSLMMAGDWLQGPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVT-YCLTYILSC-ITKHS 121 (360)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~-~~~~~~~~~-l~~~~ 121 (360)
..++..+..+...|.+|. +.+++|.|+.++|.+.+...+...+.+++.|+++||+||||.++. +.....++. +++++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~ 84 (375)
T TIGR00899 5 VAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWN 84 (375)
T ss_pred HHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhc
Confidence 344455555666787775 567899999999999999999899999999999999999987665 444445555 77888
Q ss_pred chHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchh
Q 018113 122 PQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAP 200 (360)
Q Consensus 122 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~ 200 (360)
++++.+++.|++.|.+.+...|.... +..|. +++++.......... .+..+|..+++.+++.+.+. ++|+..
T Consensus 85 ~~~~~l~~~~~~~g~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~ig~~~~~~l~~~--~~~~~~ 157 (375)
T TIGR00899 85 RNYFLLLVLGVLLSSFASTANPQLFA-LAREHADRTGREAVMFSSVMR----AQISLAWVIGPPLAFWLALG--FGFTVM 157 (375)
T ss_pred chHHHHHHHHHHHHhhhhhhHHHHHH-HHHHHhhhcchhhHHHHHHHH----HHHhHHHHHhhhHHHHHHHh--cccHHH
Confidence 99999999999998877777666644 66665 333332111112222 22335556666666666554 356677
Q ss_pred hhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCC
Q 018113 201 FDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE 280 (360)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (360)
|++.+.+.++..+......||.+++++++++ . .+.++.+++++.+.......+....... ...+.|.|.+++.+
T Consensus 158 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g 231 (375)
T TIGR00899 158 FLTAALAFVLCGVLVWLFLPSYPRGAPGALT-R----LEVRGLLASRDTRLLFVACTLMWGCNIL-YIINMPLLIIHELG 231 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCcccccC-c----chhhhhhcCcchHHHHHHHHHHHHHHHH-HHhhhHHHHHHHcC
Confidence 7776665555444443334543322221111 1 1123356666666544333333222222 34566777665555
Q ss_pred cch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 281 IPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 281 ~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
.++ +..........+++.++.+++.||+++|+
T Consensus 232 ~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~ 266 (375)
T TIGR00899 232 LPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRR 266 (375)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchh
Confidence 554 34444445567778899999999999985
No 43
>PRK12382 putative transporter; Provisional
Probab=99.90 E-value=4.3e-21 Score=174.05 Aligned_cols=263 Identities=16% Similarity=0.144 Sum_probs=153.7
Q ss_pred hHHHHHHHHHHHHHhhhhhHHHHH-HHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-
Q 018113 39 KNNYLLVYSLMMAGDWLQGPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC- 116 (360)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~- 116 (360)
.+......++.....++..|.+|. +.+|+|.|++++|.+.+...+...+.+++.|+++||+||||+++.+.+...++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 96 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGL 96 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHH
Confidence 333333444444445555677775 578999999999999999999999999999999999999999999887766543
Q ss_pred H---HHh-----cchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 018113 117 I---TKH-----SPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (360)
Q Consensus 117 l---~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 185 (360)
. ... .++++.+++.|+++|++.+...+...+ ++.|. ++|++..+..+.. .. .|..+++.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~a~~~~~~~----~~----~g~~~g~~~ 167 (392)
T PRK12382 97 AYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALT-WGLGLVGPKHSGKVMSWNGMA----MY----GALAAGAPL 167 (392)
T ss_pred HHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhCCccccchhhhHHHHH----HH----HHHHHHHHH
Confidence 1 222 357889999999999999988776644 55554 6677755443322 22 344455555
Q ss_pred hhhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHH
Q 018113 186 GNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYT 265 (360)
Q Consensus 186 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (360)
++.+.+..+ |+..+.+.....++..... ...||++++++++ + +.++..+..++ +... ..+.. ..+.
T Consensus 168 ~~~l~~~~g--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~---~~~~~~~~~~~-~~~~-----~~l~~-~~~~ 233 (392)
T PRK12382 168 GLLLHSHFG--FAALALTTMVLPLLAWAFN-GTVRKVPAHAGER-P---SLWSVVGLIWK-PGLG-----LALQG-VGFA 233 (392)
T ss_pred HHHHHhccC--hHHHHHHHHHHHHHHHHHH-HhccCCCCCcccC-c---hHHHHHHHHHH-hHHH-----HHHHH-HHHh
Confidence 555444444 5554444333332222222 2333322221111 1 11111111111 1111 11111 1222
Q ss_pred HHHhhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHH
Q 018113 266 FVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVS 326 (360)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 326 (360)
....+.|.|.++....+.+.......++.+++++..+++.||+|+|+ .+..+..+..+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~--~~~~~~~~~~~~ 292 (392)
T PRK12382 234 VIGTFVSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVK--VAIVSLLVETVG 292 (392)
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCe--ehHHHHHHHHHH
Confidence 23455666655432222345555667778899999999999999885 333333333333
No 44
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.90 E-value=3.7e-21 Score=175.48 Aligned_cols=265 Identities=22% Similarity=0.192 Sum_probs=160.3
Q ss_pred ccccchhHHHHHHHHHHHHHhhhhhHHHHHHHHhhCCChhh-----hHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHH
Q 018113 33 SAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGE-----IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVT 107 (360)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-----~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~ 107 (360)
.++++.........++.........|++|.+.+++|.+..+ .|.+.+...+...+.+++.|+++||+|||+++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 89 (408)
T PRK09874 10 INWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLR 89 (408)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHH
Confidence 33333333333333444444455578899999999998665 3788888899899999999999999999999999
Q ss_pred HHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHh
Q 018113 108 YCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSG 183 (360)
Q Consensus 108 ~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~ 183 (360)
+.+..+++. +..+.++++.+++.|++.|++.+. .+.... ++.|. ++|++..+.. .. +..+|..+++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~----~~----~~~~g~~~~~ 159 (408)
T PRK09874 90 SALGMGIVMVLMGLAQNIWQFLILRALLGLLGGF-VPNANA-LIATQVPRNKSGWALGTL----ST----GGVSGALLGP 159 (408)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhh-HHhHHH-HHHHhcCHhhhhHHHHHH----HH----HHHHHHHHHH
Confidence 988888876 667789999999999999997654 455544 55554 4455533322 22 2234455555
Q ss_pred hhhhhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhH
Q 018113 184 LFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSM 263 (360)
Q Consensus 184 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
.+++.+.+.. +|+..+.+.+.+.++..+......+|++++++++++ .+. ++..+..++++.+.......+.....
T Consensus 160 ~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (408)
T PRK09874 160 LAGGLLADSY--GLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEM--LHM-REVVTSLKNPKLVLSLFVTTLIIQVA 234 (408)
T ss_pred HHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhh--hHH-HHHHHhCcCCchHHHHHHHHHHHHHH
Confidence 5555555544 455667666655554444443334443222111111 111 12234567777654333222222222
Q ss_pred HHHHHhhhccccCCCCCc-c-----hhHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 264 YTFVFLWTPALSPNDEEI-P-----HGFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
......+.|.|..+..+. + .+.......++.+++.+..+++.||++||+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~ 289 (408)
T PRK09874 235 TGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEK 289 (408)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 222344555555442221 1 123444556778888899999999999985
No 45
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.90 E-value=4.5e-21 Score=174.07 Aligned_cols=241 Identities=15% Similarity=0.106 Sum_probs=160.6
Q ss_pred hhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHH
Q 018113 54 WLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRI 132 (360)
Q Consensus 54 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~ 132 (360)
....|.+|.+.+++|.|+.+.++..+...++..+++++.|+++||+|||+++..+.....++. +..++++++.+++.|+
T Consensus 25 ~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 104 (394)
T PRK11652 25 TIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASA 104 (394)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 333577899999999999999999999999999999999999999999999999998888876 6778899999999999
Q ss_pred HHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHH
Q 018113 133 LGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLA 209 (360)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 209 (360)
+.|++.+...+.... +..|. +++++ .... ...+..++..++|.+++.+.+.. +|+..+...+....
T Consensus 105 ~~g~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~g~~i~~~l~~~~--g~~~~f~~~~~~~~ 173 (394)
T PRK11652 105 IQGLGTGVGGVMART-LPRDLYEGTQLRH----ANSL----LNMGILVSPLLAPLIGGLLTTLF--GWRACYLFLLLLGA 173 (394)
T ss_pred HHHhhhhHHHHHHHH-HHHHhcCHHHHHH----HHHH----HHHHHHHHHHHHHHHHHHHHhcc--ChHHHHHHHHHHHH
Confidence 999998876665533 55654 22322 1122 23344455666666666665543 46666766555444
Q ss_pred HHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHH
Q 018113 210 IGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFI 286 (360)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 286 (360)
+.........||++++++++ ++.++..++.+|+|+.+............... ...+.+.+.++..+.+. +..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~ 248 (394)
T PRK11652 174 GVTFSMARWMPETRPADARR----TRVLASYRTLLSNRRFNCYLLMLIGTLAGIAV-FEACSGVLMGAVLGLSSMTVSIL 248 (394)
T ss_pred HHHHHHHHhCCccCccccch----hHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH-HHHhChHHHHHHcCCCHHHHHHH
Confidence 33333323445543322221 12344566778888877654433332222222 34455666666555554 444
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCC
Q 018113 287 FATFMLASMLGSSLASRLMARSPP 310 (360)
Q Consensus 287 ~~~~~~~~~~~~~~~g~l~dr~g~ 310 (360)
.....++.++++.+.+++.||.++
T Consensus 249 ~~~~~~~~~~g~~~~~~l~~~~~~ 272 (394)
T PRK11652 249 FILPIPAAFFGAWFAGRPNKRFST 272 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555667777888888888888873
No 46
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.90 E-value=3.3e-21 Score=180.28 Aligned_cols=161 Identities=20% Similarity=0.226 Sum_probs=120.3
Q ss_pred ccchhHHHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHH
Q 018113 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (360)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 110 (360)
.++++|+.+....+..+.+.++ .+..|.+.+++|+|+.+.+++.+...++..+++++.|+++||+|||+++..+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 93 (496)
T PRK03893 14 LNRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIV 93 (496)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 3455666665666666666655 456899999999999999999999999899999999999999999999999998
Q ss_pred HHHHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 018113 111 TYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (360)
Q Consensus 111 ~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 186 (360)
..+++. +.+++++++.+++.|++.|++.+..++.... ++.|. ++|++..+.. . .+..+|..+++.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~----~----~~~~~g~~~~~~~~ 164 (496)
T PRK03893 94 LFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSAT-YVIESWPKHLRNKASGFL----I----SGFSIGAVVAAQVY 164 (496)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCHHHHHHHHHHH----H----HHHHHHHHHHHHHH
Confidence 888877 7788899999999999999999988787755 67775 4455533322 2 23335556666666
Q ss_pred hhhhcccCCCCchhhhhhHH
Q 018113 187 NLLVDSFSLGPVAPFDAAAC 206 (360)
Q Consensus 187 ~~l~~~~~~~~~~~~~~~~~ 206 (360)
+.+.+.. +|+..|.+...
T Consensus 165 ~~l~~~~--~w~~~f~~~~~ 182 (496)
T PRK03893 165 SLVVPVW--GWRALFFIGIL 182 (496)
T ss_pred HHHhccC--CHHHHHHHHHH
Confidence 6665554 45555655433
No 47
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.90 E-value=5.1e-21 Score=172.83 Aligned_cols=244 Identities=15% Similarity=0.170 Sum_probs=154.0
Q ss_pred HHHHHhhhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHH
Q 018113 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKI 126 (360)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~ 126 (360)
+.....+...|++|.+.+|+|.|+++.|++.+...++..+++++.|+++||+|||+++..+.++.+++. .+++++|++.
T Consensus 17 ~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (381)
T PRK03633 17 LLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWS 96 (381)
T ss_pred HHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 333334444788999999999999999999999999999999999999999999999999999998877 7788999999
Q ss_pred HHHHHHHHHhHhhhhhhhhhhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhh
Q 018113 127 LMIGRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAA 204 (360)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~ 204 (360)
++++|+++|++.+...+.....+..+. ++|++..+.. ..+.. +|..+++.+++.+.+.. .+...+...
T Consensus 97 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~----~g~~~g~~~~~~l~~~~--~~~~~~~~~ 166 (381)
T PRK03633 97 WLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAY----MMVYY----LGTVLGQLLVSKVSTEL--MSVLPWVTG 166 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH----HHHHH----HHHHHHHHHHhcccccc--cchHHHHHH
Confidence 999999999999988777655333222 4555533332 32333 44444444444433321 111222211
Q ss_pred HHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch-
Q 018113 205 ACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH- 283 (360)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 283 (360)
............+.++++++ ++++ ++.++.+|+|+.+..... .+.....+.....+.|.|.++. +.+.
T Consensus 167 -~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lp~~~~~~-g~s~~ 235 (381)
T PRK03633 167 -LVLAAILPLLFTRILNQQAE-NHDS-------TSIWPMLKLRQARLGVNG-CIISGIVLGSLYGLMPLYLNHQ-GMSDA 235 (381)
T ss_pred -HHHHHHHHHHHhcccCCCCC-CCCC-------CCHHHHHHhcchHHHHHH-HHHHHHHHHHHHHHHHHHHHHc-CCCHH
Confidence 11111111111222222111 1110 122345667766643222 2222222232455678777653 4443
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 284 --GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 284 --~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
+...+...++.++++...+++.||+++|+
T Consensus 236 ~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 266 (381)
T PRK03633 236 SIGFWMALLVSAGILGQWPIGRLADRFGRLL 266 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHcCcHH
Confidence 45666777889999999999999999984
No 48
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.90 E-value=4.4e-21 Score=174.43 Aligned_cols=245 Identities=16% Similarity=0.063 Sum_probs=148.5
Q ss_pred HHHHHHHHhhhhhHHHHH-HHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHh--
Q 018113 45 VYSLMMAGDWLQGPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH-- 120 (360)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~-- 120 (360)
..++..+..++..|.+|. +.+++|.|+.+.|++.+...++..+.+++.|+++||+||||++..+.++.+++. .+.+
T Consensus 23 ~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~ 102 (399)
T PRK05122 23 FTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAG 102 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhh
Confidence 334444555555777776 568899999999999999999999999999999999999999999998887754 3322
Q ss_pred -cc-----hHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 018113 121 -SP-----QYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD 191 (360)
Q Consensus 121 -~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~ 191 (360)
.+ ++..+++.|+++|++.+...+.... ++.|. ++|++..+...... . +|..+++.+++.+.+
T Consensus 103 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~----~----~g~~~g~~l~~~l~~ 173 (399)
T PRK05122 103 LLAAWPVLSLLLLLLGRLLLGIGESLAGTGSIL-WGIGRVGALHTGRVISWNGIAT----Y----GALAIGAPLGVLLYH 173 (399)
T ss_pred hhhccchhHHHHHHHHHHHHHhhHHhhcchHHH-HHHhhcChhhhccchhhhhhhh----h----HHHHHHHHHHHHHHH
Confidence 22 5668899999999999988787755 55554 56666444333222 2 344455555555555
Q ss_pred ccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhh
Q 018113 192 SFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWT 271 (360)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (360)
..+ |+..+.+...+.++..+.. ...|++++++++ + ++.+ +.+|+ .+.......+... .+.....+.
T Consensus 174 ~~g--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~---~~~~----~~~~~--~~~~~~~~~~~~~-~~~~~~~~~ 239 (399)
T PRK05122 174 WGG--LAGLGLLIMLLALLGLLLA-RPRPAVPPVKGE-R---LPFR----RVLGR--VWPYGMGLALASI-GFGTIATFI 239 (399)
T ss_pred ccc--HHHHHHHHHHHHHHHHHHH-hcCCCCCCCCcc-c---hhHH----HHHHH--HHHHHHHHHHHHH-HHHHHHHHH
Confidence 444 5555555444443333322 222322211111 1 1111 11221 1111111111111 122234556
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 272 PALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
|.|.++....+.+.......++.+++++..+++.||+++|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~ 280 (399)
T PRK05122 240 TLYYAARGWDGAALALTLFGVAFVGARLLFGNLINRLGGLR 280 (399)
T ss_pred HHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 66554432222355566777888899999999999999874
No 49
>PRK10504 putative transporter; Provisional
Probab=99.90 E-value=2.3e-21 Score=180.06 Aligned_cols=256 Identities=14% Similarity=0.062 Sum_probs=166.0
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
.+..|.+.+|+|.|+.+.+++.+...++..++.++.|+++||+|||++++.+..+.+++. ++.++++++.+++.|+++|
T Consensus 30 ~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g 109 (471)
T PRK10504 30 NTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQG 109 (471)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 567999999999999999999888888888899999999999999999999988888876 6778899999999999999
Q ss_pred hHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 212 (360)
++.+...+.... ++.|. ++|+... +... .+..+|..+++.+++.+.++.+ |+..|........+..
T Consensus 110 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~----~~~~~g~~~g~~~~g~l~~~~g--w~~~f~~~~~~~~l~~ 178 (471)
T PRK10504 110 VGGAMMVPVGRL-TVMKIVPREQYMAAM----TFVT----LPGQVGPLLGPALGGLLVEYAS--WHWIFLINIPVGIIGA 178 (471)
T ss_pred hhhHHHHHHHHH-HHHHHcCHHHHHHHH----HHHH----HHHHHHHHhhhHHHHHHHhhcc--HHHHHHHHHHHHHHHH
Confidence 999998887744 67775 2333322 1222 2223555666666666666544 5566666555444444
Q ss_pred HHHhhhhccccCCCCcchhH-------------------------H-------------------HHHHH----HHHHHh
Q 018113 213 VIILSSWTENYGDPSESKDL-------------------------L-------------------TQFRG----AAVAIA 244 (360)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~-------------------------~-------------------~~~~~----~~~~~~ 244 (360)
+......|+.+.++.+.+.. . ++.+. ...+++
T Consensus 179 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (471)
T PRK10504 179 IATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKLF 258 (471)
T ss_pred HHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHh
Confidence 43322223222111110000 0 00000 012467
Q ss_pred cchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHH
Q 018113 245 SDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFV 321 (360)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 321 (360)
|||++........+.... +.....+.|.|.+...+.++ +.......++.+++.++.+++.||+|+|+ .+..+..
T Consensus 259 ~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~--~~~~~~~ 335 (471)
T PRK10504 259 RTRTFSLGLAGSFAGRIG-SGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRR--VLVATTL 335 (471)
T ss_pred cccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH--HHHHHHH
Confidence 788877765544444443 33345667777765555554 45556667777888899999999999984 4444444
Q ss_pred HHHHH
Q 018113 322 VSSVS 326 (360)
Q Consensus 322 ~~~~~ 326 (360)
...+.
T Consensus 336 ~~~~~ 340 (471)
T PRK10504 336 GLALV 340 (471)
T ss_pred HHHHH
Confidence 34333
No 50
>TIGR00895 2A0115 benzoate transport.
Probab=99.90 E-value=2.9e-21 Score=175.27 Aligned_cols=264 Identities=21% Similarity=0.258 Sum_probs=164.2
Q ss_pred cchhHHHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHH
Q 018113 36 NSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (360)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~ 111 (360)
+++++..+..+....+.++++ .+..|.+.+++|.++.+.+.+.+...++..+++++.|+++||+|||+.+..+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 12 SRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 344555555555555555544 4558899999999999999999999998999999999999999999999999988
Q ss_pred HHHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018113 112 YILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (360)
Q Consensus 112 ~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (360)
.+++. +..++++++.+++.|++.|++.+...+.... ++.|. ++|++..+.... +..+|..+++.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~--------~~~~g~~~~~~~~~ 162 (398)
T TIGR00895 92 FSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNA-LVSEYAPKRFRGTAVGLMFC--------GYPIGAAVGGFLAG 162 (398)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHH-HHHHHcCHHhhchhHhhHhh--------HHHHHHHHHHHHHH
Confidence 88877 6778899999999999999999988887755 77776 456664433322 22345555555555
Q ss_pred hhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccC----C-CCc----------------------chhHHHHHHHHH
Q 018113 188 LLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYG----D-PSE----------------------SKDLLTQFRGAA 240 (360)
Q Consensus 188 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~----------------------~~~~~~~~~~~~ 240 (360)
.+.+..+|+ ..+...+.+..+.........||+++ + +++ .++..++.++..
T Consensus 163 ~l~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (398)
T TIGR00895 163 WLIPVFGWR--SLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVF 240 (398)
T ss_pred HHhhcccce--eehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHH
Confidence 555554444 55555433333333332223333211 0 000 000000011111
Q ss_pred HHHhcc---hhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 241 VAIASD---EKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 241 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
+..+++ ++.+.......+. ...+.....+.|.+.++ .+.+. +.......++.++++++.+++.||+++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 316 (398)
T TIGR00895 241 KALFQGKTARITVLLWLLYFML-LVGVYFLTNWLPKLMVE-LGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRV 316 (398)
T ss_pred HHHhcchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH
Confidence 222222 2222222222222 22333346677744433 34433 46667778889999999999999999873
No 51
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.89 E-value=1e-20 Score=171.48 Aligned_cols=263 Identities=18% Similarity=0.203 Sum_probs=156.8
Q ss_pred ccchhHHHHHHHHHHHHHhhhhhHHHHH-HHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHH-HHHHHH
Q 018113 35 FNSFKNNYLLVYSLMMAGDWLQGPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACV-TYCLTY 112 (360)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~-~~~~~~ 112 (360)
.+...+.++...++.........|.+|. +.+|+|.|++++|.+.+...+.+.+.+++.|..+||+||||.++ .+.+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~ 92 (393)
T PRK15011 13 FDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLG 92 (393)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHH
Confidence 3445566666666666666666777555 56889999999999987776667766666555599999998755 445555
Q ss_pred HHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 018113 113 ILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLV 190 (360)
Q Consensus 113 ~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~ 190 (360)
+++. +.+++++++.+++.+.+.|...+...+.... +..|. ++|++.......... .+..+|..+++.+++.+.
T Consensus 93 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~lg~~~g~~i~~~l~ 167 (393)
T PRK15011 93 VLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFA-LAREHADKTGREAVMFSSFLR----AQVSLAWVIGPPLAYALA 167 (393)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHH-HHHHHhhhccchHHHHHHHHH----HHHHHHHHHhhHHHHHHH
Confidence 5555 6678889988766655544444455565544 66665 444442222222222 333456666677777666
Q ss_pred cccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchh-HHHHHHHHHHHHhhHHHHHHh
Q 018113 191 DSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEK-IALLGAIQSLFEGSMYTFVFL 269 (360)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 269 (360)
++. +||..|...+...++..+......||.++++++.++..+ ...++++ .+.......... ..+.....
T Consensus 168 ~~~--gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 237 (393)
T PRK15011 168 MGF--SFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATGTLE-------APRRNRRDTLLLFVICTLMW-GTNSLYII 237 (393)
T ss_pred Hhc--ChHHHHHHHHHHHHHHHHHHHhhcCccCCCCcccccccc-------ccccccccHHHHHHHHHHHH-HHHHHHHH
Confidence 554 566777777666555554443445554332221111101 1122322 222222222222 22332456
Q ss_pred hhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 270 WTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 270 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
+.|.|.+++.+.+. +.......+..+++.++.|+++||+++|+
T Consensus 238 ~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~ 283 (393)
T PRK15011 238 NMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRF 283 (393)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 78888877666665 34445556667888999999999999985
No 52
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.89 E-value=1.6e-21 Score=180.87 Aligned_cols=266 Identities=13% Similarity=0.001 Sum_probs=178.7
Q ss_pred ccchhHHHHHHHHHHHHHhhhh----hHHHHHHHH----------------------hhCCChhhhHHHHHHHHHHHhhh
Q 018113 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYS----------------------TYGFGKGEIGQLFIAGFGSSMLF 88 (360)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----------------------~~g~s~~~~g~~~~~~~~~~~~~ 88 (360)
+.+.|+.+....+.....+..+ +...+.+.+ |++++..+.|.+.+...++..++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 4556666666666666665555 111334444 78999999999999999999999
Q ss_pred hhhhhhhhhhhcchHHHHHHHHHHHHHH-HHH--hcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHH
Q 018113 89 GTIVGSLADKQGRKRACVTYCLTYILSC-ITK--HSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQW 162 (360)
Q Consensus 89 ~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~--~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~ 162 (360)
+++.|+++||+|||+++..+.++.+++. ++. ..+++..+++.|+++|++.+...+.... +++|+ ++|++..+.
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~ 171 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHK-IIVKWAPPKERSRLLGM 171 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHH-HHHhcCCHHHHHHHHHH
Confidence 9999999999999999999998888866 443 3466888999999999999999888855 88887 455553322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCC-cchhHHHHH-----
Q 018113 163 LSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPS-ESKDLLTQF----- 236 (360)
Q Consensus 163 ~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----- 236 (360)
. ..+..+|..+++.+.+.+.+.. .+|+..|.+.+++.++..+......+|++++++ +.+++.+..
T Consensus 172 ~--------~~~~~~g~~i~~~l~~~l~~~~-~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~ 242 (465)
T TIGR00894 172 S--------TSGFQLGTFIFLPISGWLCESW-GGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQ 242 (465)
T ss_pred H--------HHHHHHHHHHHHHHHHHHHhcc-CCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcc
Confidence 2 2233456666666666666542 145566766655554443333222222221111 111111100
Q ss_pred --------HHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHH
Q 018113 237 --------RGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLM 305 (360)
Q Consensus 237 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~ 305 (360)
+..+++++++++++.......+.....+. ...|.|.|+++..+.+. +...+...++.+++.++.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~ 321 (465)
T TIGR00894 243 GQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTI-LPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLA 321 (465)
T ss_pred cccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 11356788888888877666665555554 57899999887666654 5666777888999999999999
Q ss_pred hhcCCC
Q 018113 306 ARSPPR 311 (360)
Q Consensus 306 dr~g~~ 311 (360)
||.++|
T Consensus 322 d~~~~~ 327 (465)
T TIGR00894 322 DFLKSS 327 (465)
T ss_pred HHHHHc
Confidence 997644
No 53
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.89 E-value=7.3e-21 Score=172.20 Aligned_cols=256 Identities=16% Similarity=0.105 Sum_probs=163.3
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HH
Q 018113 40 NNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT 118 (360)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~ 118 (360)
+.+....++..+.+.......+.+.+|+|.++.+.+++.+...+...+.+++.|+++||+||||+++.+.++.+++. ++
T Consensus 6 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~ 85 (393)
T PRK11195 6 YAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLM 85 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHH
Confidence 34444445555555555444666789999999999999999999999999999999999999999999999988866 55
Q ss_pred HhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCC
Q 018113 119 KHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL 195 (360)
Q Consensus 119 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~ 195 (360)
.++++. ++.|+++|++.+...|...+ ++.|. ++|++..+..... .. ++..++|.+++.+.+.
T Consensus 86 ~~~~~~---~~~r~l~G~~~a~~~pa~~a-~i~~~~~~~~~~~a~~~~~~~----~~----~~~~~Gp~lgG~l~~~--- 150 (393)
T PRK11195 86 LFGIHP---LLAYGLVGIGAAAYSPAKYG-ILTELLPGEKLVKANGWMEGS----TI----AAILLGTVLGGALADP--- 150 (393)
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHH-HHHHHcCHHHHHHHHHHHHHH----HH----HHHHHHHHHHHHHHHH---
Confidence 555553 77899999999999998866 88876 5566644433322 22 4445555555555442
Q ss_pred CCchhhhhhHHHHHHHHHHHhhhhccccCCCCc----chhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhh
Q 018113 196 GPVAPFDAAACFLAIGMVIILSSWTENYGDPSE----SKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWT 271 (360)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (360)
.|+..+.+.....++..+.. ...||+++++++ .++..++..+..+.++++|..........+....... .....
T Consensus 151 ~~~~~~~i~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 228 (393)
T PRK11195 151 HAEAALAVCALIYLLAALFN-LFIPRLGARRPGQSWNPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGAT-LRFLV 228 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hcCCCCcccccccCCCHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHH-HHHHH
Confidence 35555555444333332222 344543322111 1111233334456778888766543333333322222 23334
Q ss_pred ccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 272 PALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 272 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
|.|.++..+.++ +.......++.+++++..+++.||.++++
T Consensus 229 ~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~ 272 (393)
T PRK11195 229 LAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLR 272 (393)
T ss_pred HHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 445554445444 56677778899999999999999988774
No 54
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.89 E-value=2.1e-21 Score=177.57 Aligned_cols=269 Identities=16% Similarity=0.101 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHH-
Q 018113 42 YLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK- 119 (360)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~- 119 (360)
+....++..+..+...+.+|.+.++++.++.+.|++.+...+...+++++.|+++||+|||+++..+..+.+++. ..+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~ 101 (417)
T PRK10489 22 VFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLAL 101 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHH
Confidence 333445555666666777899999999999999999999999999999999999999999999998877776654 222
Q ss_pred ----hcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc
Q 018113 120 ----HSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS 192 (360)
Q Consensus 120 ----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~ 192 (360)
..++++.+.+.|++.|++.+...+.... ++.|. ++|++..+.. . .+..+|..+++.+++.+.+.
T Consensus 102 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~----~~~~~g~~~g~~l~g~l~~~ 172 (417)
T PRK10489 102 NAFLPEPSLLAIYLLGLWDGFFGSLGVTALLA-ATPALVGRENLMQAGAIT----M----LTVRLGSVISPALGGLLIAA 172 (417)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhh-hhhhccCHHHHHHHHHHH----H----HHHhHHHHhHHHHHHHHHHH
Confidence 2567888999999999988877666645 66665 3344422222 2 22335555666666665555
Q ss_pred cCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhc
Q 018113 193 FSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTP 272 (360)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (360)
.+|+|. +.......++..+.. .+.|+++++++++++..++.++..+..+++|.++...+...+. ..... ...+.|
T Consensus 173 ~~~~~~--~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~p 247 (417)
T PRK10489 173 GGVAWN--YGLAAAGTFITLLPL-LRLPALPPPPQPREHPLRSLLAGFRFLLASPVVGGIALLGGLL-TMASA-VRVLYP 247 (417)
T ss_pred HhhHHH--HHHHHHHHHHHHHHH-HhCCCCCCCCcccccchHHHHHHHHHHHcChHHHHHHHHHHHH-HHHHh-HHHhhH
Confidence 555554 544444444333333 3445443322222222334444556677888766544333332 22223 466788
Q ss_pred cccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHH
Q 018113 273 ALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVS 326 (360)
Q Consensus 273 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 326 (360)
.|.++..+.+. +...+...++.+++.++.+++.||.+++ +.+..+.....+.
T Consensus 248 ~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~--~~l~~~~~~~~~~ 302 (417)
T PRK10489 248 ALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG--LLMLLSTLGSFLA 302 (417)
T ss_pred HHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc--hHHHHHHHHHHHH
Confidence 88877666554 4666777888999999999999986555 3344444433333
No 55
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.89 E-value=1.6e-21 Score=175.73 Aligned_cols=243 Identities=13% Similarity=0.101 Sum_probs=166.1
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
++..|.+.+++|.|+++.|++.+...++..+++++.|+++||+|||+++..+.++.+++. +..++++++.+++.|++.|
T Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 94 (379)
T TIGR00881 15 ALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNG 94 (379)
T ss_pred hhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 455889999999999999999999999999999999999999999999999999998877 7788899999999999999
Q ss_pred hHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHh-hhhhhhhcccCCCCchhhhhhHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSG-LFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 211 (360)
++.+...+...+ ++.|. ++|++..+....... +|..+++ .++..+.+.. +|+..+.+.+.+.++.
T Consensus 95 ~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~--------~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 163 (379)
T TIGR00881 95 IFQGMGWPPCGR-TVTKWFSRSERGTWVSFWNCSHN--------VGGGLLPPLVLFGIAELY--SWHWVFIVPGIIAIIV 163 (379)
T ss_pred hhccccCCchHH-HHHHhcCHhhheeeEeehhccch--------hHHHHHHHHHHHHHHhcC--CchhHHHHHHHHHHHH
Confidence 999988887755 77776 456665444433333 3334444 2333333333 4555666655544443
Q ss_pred HHHHhhhhccccCCC----------Cc-------chhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccc
Q 018113 212 MVIILSSWTENYGDP----------SE-------SKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (360)
Q Consensus 212 ~~~~~~~~~~~~~~~----------~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (360)
.+......+|+++++ ++ +++..++.+...++.+++|.++...+...+....... ...+.|.|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 242 (379)
T TIGR00881 164 SLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTG-ILDWSPLY 242 (379)
T ss_pred HHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 333322333221100 00 0000011122345677888888776665555544444 57788888
Q ss_pred cCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 018113 275 SPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPR 311 (360)
Q Consensus 275 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 311 (360)
.++..+.+. +.......++.++++++.+++.||..+|
T Consensus 243 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~ 282 (379)
T TIGR00881 243 LTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNG 282 (379)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCC
Confidence 877666554 4666777888999999999999986443
No 56
>PRK11043 putative transporter; Provisional
Probab=99.89 E-value=2.1e-20 Score=170.04 Aligned_cols=240 Identities=12% Similarity=0.062 Sum_probs=161.1
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
.|..|.+.+++|.++++.++..+...++..+++++.|+++||+|||+++..+..+..++. ++.++++++.+++.|+++|
T Consensus 26 ~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 105 (401)
T PRK11043 26 LPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQA 105 (401)
T ss_pred HhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 577888899999999999999999999999999999999999999999999998888877 7788899999999999999
Q ss_pred hHhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (360)
++.+...+.... ++.|..++.+...... ... .+..++..+++.+++.+.+..+ |+..+.....+.++.....
T Consensus 106 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~g~~i~~~l~~~~g--~~~~~~~~~~~~~~~~~~~ 177 (401)
T PRK11043 106 VGVCSAAVIWQA-LVIDRYPAQKANRVFA-TIM----PLVALSPALAPLLGAWLLNHFG--WQAIFATLFAITLLLILPT 177 (401)
T ss_pred hhhHHHHHHHHH-HHHHhcCcHHHHHHHH-HHH----HHHHHHHHHHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHHHH
Confidence 988777665544 6666522222111111 111 1223555666666666666544 5566666555554444333
Q ss_pred hhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHH
Q 018113 216 LSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFML 292 (360)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 292 (360)
...+|+++++++ + +.+.+.++++|+|+.+.......+.....+. ...+.|.+.++ .+.+. +.......+
T Consensus 178 -~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~-~g~s~~~~g~~~~~~~~ 249 (401)
T PRK11043 178 -LRLKPSKKARKQ-S----QDALTFKQLLKSKTYLGNVLIFAACSAAFFA-WLTGSPFILEQ-MGYSPADIGLSYVPQTI 249 (401)
T ss_pred -HHcCCCCCcccc-c----hHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-HHHHhHHHHHH-cCCCHHHHHHHHHHHHH
Confidence 233333222111 1 1123455778888877654444443333333 35667777654 35544 444455567
Q ss_pred HHHHHHHHHHHHHhhcCCCh
Q 018113 293 ASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 293 ~~~~~~~~~g~l~dr~g~~~ 312 (360)
+.++++...+++.||+++|+
T Consensus 250 ~~~~g~~~~~~l~~r~~~~~ 269 (401)
T PRK11043 250 AFLVGGYGCRAALQKWGGEQ 269 (401)
T ss_pred HHHHHHHHHHHHHHHcCHHH
Confidence 78889999999999998875
No 57
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.89 E-value=3.7e-20 Score=172.49 Aligned_cols=178 Identities=16% Similarity=0.140 Sum_probs=123.1
Q ss_pred chhHHHHHHHHHHHHHhhhh----hHHHHHHHHhh--------CCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHH
Q 018113 37 SFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTY--------GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRA 104 (360)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--------g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~ 104 (360)
+++.+...++.+..+.++++ ++..|.+.+++ +.++.+.+++.+...++..+++++.|+++||+|||++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 44555666666677778777 34567777776 8889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHHhc------------chHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHH
Q 018113 105 CVTYCLTYILSC-ITKHS------------PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFS 168 (360)
Q Consensus 105 l~~~~~~~~~~~-l~~~~------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~ 168 (360)
+..+.++.+++. .++++ ++++.++++|+++|++.|...+.... +++|. ++|++..+..+...
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~-~i~e~~~~~~rg~~~~~~~~~~- 165 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPM-YIAEIAPAHIRGKLVSFNQFAI- 165 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHH-HHHhhCChhhhhHHHHHHHHHH-
Confidence 999999988766 44442 22567889999999999999888855 88887 56777554444333
Q ss_pred HHHHHHHHHHHHHHhhhhh----hhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccc
Q 018113 169 KAIFLGNGLVAILSGLFGN----LLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTEN 222 (360)
Q Consensus 169 ~~~~~g~~~g~~~~~~l~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (360)
.+|..++..++..+.. ...+ .++||..|++.++..++..+.. ...||+
T Consensus 166 ---~~G~~~~~~~~~~~~~~~~~~~~~--~~gWr~~f~~~~~~~~~~~~~~-~~l~~s 217 (479)
T PRK10077 166 ---IFGQLVVYFVNYFIARSGDASWLN--TDGWRYMFASEAIPALLFLMLL-YFVPET 217 (479)
T ss_pred ---HHHHHHHHHHHHHHhccCcccccc--cCChHHHHHHHHHHHHHHHHHH-HcCCCC
Confidence 3333333333322211 1112 3567777877665555544333 445554
No 58
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.89 E-value=1.6e-20 Score=169.50 Aligned_cols=266 Identities=13% Similarity=0.077 Sum_probs=170.4
Q ss_pred HHHHHHHHhhhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHH-H-HH-HHHhc
Q 018113 45 VYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYI-L-SC-ITKHS 121 (360)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~-~-~~-l~~~~ 121 (360)
..+......+...|++|.+.+|+|.|.+++|.+.+...+...+.+++.|+++||+|||+.......... + .. .+..+
T Consensus 12 ~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~ 91 (382)
T TIGR00902 12 GFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAGA 91 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 334444445666899999999999999999999999999999999999999999998554322221111 1 12 33467
Q ss_pred chHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchh
Q 018113 122 PQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAP 200 (360)
Q Consensus 122 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~ 200 (360)
++++.+++.|.++|.+.+...|.... +..|+ ++|++..+..... ..+|..+++.+++.+.++.||+ ..
T Consensus 92 ~~~~~l~~~~~l~~~~~~~~~p~~~a-l~~~~~~~~~~~~g~~~~~--------~slG~~~g~~l~g~l~~~~g~~--~~ 160 (382)
T TIGR00902 92 HNAWLLFIAIGLFALFFSAGMPIGDA-LANTWQKQFGLDYGKVRLI--------GSAAFIIGSALFGGLIGMFDEQ--NI 160 (382)
T ss_pred hhHHHHHHHHHHHHHHHccchhHHHH-HHHHHHHHcCCCccHHHHH--------HHHHHHHHHHHHHHHHHHcChh--HH
Confidence 89999999999999988887787755 55554 5566644333322 2266667777777777665555 55
Q ss_pred hhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCC
Q 018113 201 FDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE 280 (360)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (360)
|.+......+..... ...++.+++++++++ .++..++.++++|||+++.......+.+..... ...+.|.|.++ .+
T Consensus 161 f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~-~~~~~~~~l~~-~g 236 (382)
T TIGR00902 161 LAILTAGLAFMLIGF-LIKPTIPPKDAIPED-ESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAA-YYGFSAIYWQA-AG 236 (382)
T ss_pred HHHHHHHHHHHHHHH-HcCCCCCCCcccccc-ccccchhHHHHHcChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-CC
Confidence 655443322222222 212221111111111 111122355788999998887766666655545 46678888766 45
Q ss_pred cch---hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHH
Q 018113 281 IPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSL 327 (360)
Q Consensus 281 ~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 327 (360)
.+. +.......+..+++....+++.||+|+|+ .+..+.....+..
T Consensus 237 ~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~--~l~~~~~~~~~~~ 284 (382)
T TIGR00902 237 ISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARD--LLLISAIACVGRW 284 (382)
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHH--HHHHHHHHHHHHH
Confidence 554 55666677888889999999999999884 4444444444433
No 59
>PRK10054 putative transporter; Provisional
Probab=99.89 E-value=1.4e-20 Score=170.39 Aligned_cols=258 Identities=14% Similarity=0.074 Sum_probs=161.1
Q ss_pred hhHHHHHHHHHHHHHhhhhhHHHH-HHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 018113 38 FKNNYLLVYSLMMAGDWLQGPYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC 116 (360)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 116 (360)
..+.+....++.....+...|++| ++.+++|+|+.++|+..+...+...+.+++.|+++||+|||+++..+.+...++.
T Consensus 8 ~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~ 87 (395)
T PRK10054 8 STSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGF 87 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHH
Confidence 334444445555555565667755 5567899999999999999999899999999999999999999999998888877
Q ss_pred -HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc
Q 018113 117 -ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS 192 (360)
Q Consensus 117 -l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~ 192 (360)
+..++++++.++++|.+.|.+.+...+.... +..|. ++|++..+.... ..+ +|..++|.+++.+.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~----~~~----lg~~igp~l~~~l~~- 157 (395)
T PRK10054 88 IAIPLVNNVTLVVLFFALINCAYSVFSTVLKA-WFADNLSSTSKTKIFSLNYT----MLN----IGWTVGPPLGTLLVM- 157 (395)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCHhHHHHHHHHHHH----HHH----HHHHHHHHHHHHHHH-
Confidence 6778899998888998888877766666544 66654 345553333222 222 444555555555443
Q ss_pred cCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhc
Q 018113 193 FSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTP 272 (360)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (360)
.+|+..|...+.+.++..+......++++++++++++ ++ .+.++.+|||+++.......+....... ...+.+
T Consensus 158 --~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~ 230 (395)
T PRK10054 158 --QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATETG--SV--WSPSVLLQDKALLWFTCSGFLASFVSGA-FASCIS 230 (395)
T ss_pred --hccCcHHHHHHHHHHHHHHHHHHHHhccccccccchh--hh--hhhhhhccCceehHHHHHHHHHHHHHHH-hhhhHH
Confidence 2455677766655555444433334443322211111 11 1235678888888766555544433222 223334
Q ss_pred cccC--CCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 273 ALSP--NDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 273 ~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
.|.. ++.+.+. +.......+..+......+++.||.++|+
T Consensus 231 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 275 (395)
T PRK10054 231 QYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRP 275 (395)
T ss_pred HHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchh
Confidence 3332 1222222 34445555556666778899999998884
No 60
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.89 E-value=2e-20 Score=174.85 Aligned_cols=186 Identities=15% Similarity=0.034 Sum_probs=129.8
Q ss_pred CcccccchhHHHHHHHHHHHHHhhhh----hHHHHHHHHhh-----CCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcc
Q 018113 31 TSSAFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTY-----GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR 101 (360)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-----g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Gr 101 (360)
|+.+..++++....++.+..+.++++ +...|.+.+++ +.++.+.+++.+...++..+++++.|+++||+||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Gr 85 (502)
T TIGR00887 6 DTAPFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGR 85 (502)
T ss_pred hccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 44566777888888888888888888 23356555542 3455667888899999899999999999999999
Q ss_pred hHHHHHHHHHHHHHH-HHHhcch------HHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHH
Q 018113 102 KRACVTYCLTYILSC-ITKHSPQ------YKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAI 171 (360)
Q Consensus 102 r~~l~~~~~~~~~~~-l~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~ 171 (360)
|+++..+.++..++. +++++++ ++.++++|++.|++.+...+.... +++|. ++|++..+.......
T Consensus 86 r~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~-~~~e~~p~~~Rg~~~~~~~~~~~--- 161 (502)
T TIGR00887 86 KRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAI-ITSEFATKKWRGAMMAAVFAMQG--- 161 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhcChhhHHHHHHHHHHHHH---
Confidence 999999999888876 6666655 788999999999999999888744 88887 677775555444444
Q ss_pred HHHHHHHHHHHhhhhhhhhc-----------------ccCCCCchhhhhhHHHHHHHHHHHhhhhccc
Q 018113 172 FLGNGLVAILSGLFGNLLVD-----------------SFSLGPVAPFDAAACFLAIGMVIILSSWTEN 222 (360)
Q Consensus 172 ~~g~~~g~~~~~~l~~~l~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (360)
+|..+++.++..+.....+ ..+|+||.++.+.++..++..+.. +..||+
T Consensus 162 -~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~-~~lpES 227 (502)
T TIGR00887 162 -FGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFR-LTIPET 227 (502)
T ss_pred -HHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHH-HhCCCC
Confidence 3333444443332221110 124678888876665555444443 445554
No 61
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.88 E-value=1.3e-20 Score=173.75 Aligned_cols=267 Identities=9% Similarity=0.066 Sum_probs=169.9
Q ss_pred CCCcccccchhHHHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHH
Q 018113 29 INTSSAFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRA 104 (360)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~ 104 (360)
++++++.+.++|.++..++........+ +.+.|.+.+++|.|.++.+++.+.......+++++.|+++||+|||++
T Consensus 7 ~~~~~~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~ 86 (455)
T TIGR00892 7 PEGPPPDGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPV 86 (455)
T ss_pred CCCCCCCCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHH
Confidence 3444455667787777666665543333 455889999999999999999999888888999999999999999999
Q ss_pred HHHHHHHHHHHH-HHHhcchHHHHHH-HHHHHHhHhhhhhhhhhhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHH
Q 018113 105 CVTYCLTYILSC-ITKHSPQYKILMI-GRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAI 180 (360)
Q Consensus 105 l~~~~~~~~~~~-l~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~ 180 (360)
++.+.++.+++. +++++++++.+++ .|++.|++.+...+.... ++.++ ++|++..+... .+..+|..
T Consensus 87 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~-~~~~~~~~~r~~a~g~~~--------~~~~~g~~ 157 (455)
T TIGR00892 87 VIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLT-MLGKYFYRRRPLANGLAM--------AGSPVFLS 157 (455)
T ss_pred HHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHH-HHHHHHHhhHHHHHHHHH--------hcccHHHH
Confidence 999998888877 7788889888765 579999998876555534 55555 45555333222 23335556
Q ss_pred HHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhc--ccc---CCC--C----cch-hH------HHHHHHH-HH
Q 018113 181 LSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWT--ENY---GDP--S----ESK-DL------LTQFRGA-AV 241 (360)
Q Consensus 181 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~--~----~~~-~~------~~~~~~~-~~ 241 (360)
+++.+++.+.+.. +||..|++.+++.++..+......+ +++ +++ + +.. +. .++..+. ..
T Consensus 158 ~~~~l~~~l~~~~--gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (455)
T TIGR00892 158 TLAPLNQYLFESF--GWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDF 235 (455)
T ss_pred HHHHHHHHHHHHh--ChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcch
Confidence 6666666666554 4556776666554433322211111 110 000 0 000 00 0011110 12
Q ss_pred HHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhc
Q 018113 242 AIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARS 308 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~ 308 (360)
+++++|+++.......+.....+. ...+.|.|.++ .+.+. +...+...++.++++++.+++.||.
T Consensus 236 ~~~~~~~~~~~~~~~~l~~~~~~~-~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~ 303 (455)
T TIGR00892 236 SLFTHRGFLVYLSGNVIMFLGFFA-PIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLK 303 (455)
T ss_pred HHhcCchHHHHHHHHHHHHHHccc-hHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 467888887765554444444333 45677777655 34444 4666777888889999999999984
No 62
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.88 E-value=6.3e-20 Score=166.49 Aligned_cols=253 Identities=16% Similarity=0.110 Sum_probs=160.4
Q ss_pred HHHHHHHHHHHHhhhhhHHHH-HHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HH
Q 018113 41 NYLLVYSLMMAGDWLQGPYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT 118 (360)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~ 118 (360)
..+...++.........|+++ ++.+++|.|+.++|...+...+...+.+++.|+++||+|||+++..+.+..+++. ++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~ 93 (400)
T PRK11646 14 FLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATM 93 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 344444455555555567755 4568899999999999999999888999999999999999999999999999977 67
Q ss_pred HhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCC
Q 018113 119 KHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL 195 (360)
Q Consensus 119 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~ 195 (360)
.++++++.+.+.|+++|++.+...+...+ ++.|. ++|++..+...... . +|..+++.+++.+. . +
T Consensus 94 ~~~~~~~~l~~~~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~----~----~g~~ig~~l~g~l~-~--~ 161 (400)
T PRK11646 94 AIAHEPWLLWLSCILSGLGGTLFDPPRTA-LVIKLIRPHQRGRFFSLLMMQD----S----AGAVIGALLGSWLL-Q--Y 161 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCHHHHHHHHHHHHHHH----H----HHHHHHHHHHHHHH-H--h
Confidence 78899999999999999998877776655 66654 55666444333333 3 34444444444444 2 3
Q ss_pred CCchhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhcccc
Q 018113 196 GPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS 275 (360)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (360)
+|+..|++.+...++..+......||.++++ +. ++.+++.++.++||+++............... ...+.|.|.
T Consensus 162 g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~ 235 (400)
T PRK11646 162 DFRLVCATGAVLFVLAAAFNAWLLPAYKLST-VR----TPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQ-VMLMLPIMV 235 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCcccccc-cc----hhhHHHHHHHHcCchHHHHHHHHHHHHHHHHH-HHHhhhhhH
Confidence 5667777666555444433323334322111 11 12233455778888877654443333222222 355778887
Q ss_pred CCCCCcch--hHHHHHHHHHHHHHHHHHHHHHhh-cCCC
Q 018113 276 PNDEEIPH--GFIFATFMLASMLGSSLASRLMAR-SPPR 311 (360)
Q Consensus 276 ~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr-~g~~ 311 (360)
++..+.+. +...+...+....+....+++.|| .+.+
T Consensus 236 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~ 274 (400)
T PRK11646 236 NDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLE 274 (400)
T ss_pred HhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 76555333 445555555555555555666554 4444
No 63
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.88 E-value=1.7e-21 Score=184.97 Aligned_cols=263 Identities=13% Similarity=0.123 Sum_probs=175.1
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcc-------------
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSP------------- 122 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~------------- 122 (360)
.+.++.+.++|+++.++.|++.+...++..+..++.|++.||+||||.+.++.++++++. +.++.+
T Consensus 53 ~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 53 NSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred HhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 566899999999999999999999999999999999999999999999999999999987 555432
Q ss_pred --------------------------------------hHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhH
Q 018113 123 --------------------------------------QYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQ 161 (360)
Q Consensus 123 --------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~ 161 (360)
.+..++++|+++|+|.+..++...+ ++.|+ ++|+...+
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~-~i~d~~~~~~~~~~~~ 211 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS-YIDDFAKSKNSPLYIG 211 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch-hhhccCCccccHHHHH
Confidence 2456788999999999999998866 88887 45566444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhc------------ccCCC----CchhhhhhHHHHHHHHHHHhhhhccccCC
Q 018113 162 WLSITFSKAIFLGNGLVAILSGLFGNLLVD------------SFSLG----PVAPFDAAACFLAIGMVIILSSWTENYGD 225 (360)
Q Consensus 162 ~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~------------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (360)
...... .+|..+|.++++.+.....+ ..++| |+..|++.+++.++..+.. ...|++.++
T Consensus 212 i~~~~~----~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l-~~~p~~lp~ 286 (633)
T TIGR00805 212 ILESIA----VFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPF-FFFPKALPK 286 (633)
T ss_pred HHHHHH----HhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH-HhCccccCC
Confidence 433333 33333444444333322111 11223 4556766665555444333 233332111
Q ss_pred C---C-----cc-------h-------hHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch
Q 018113 226 P---S-----ES-------K-------DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH 283 (360)
Q Consensus 226 ~---~-----~~-------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (360)
+ + +. + +..++..+..+++++||.++...+...+.....+. ...|.|.|++++++.++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~-~~~~lP~yl~~~~g~s~ 365 (633)
T TIGR00805 287 EGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNG-YITFLPKYLENQYGISS 365 (633)
T ss_pred cccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCcH
Confidence 0 0 00 0 00112223466789999999887777776666666 58899999998888877
Q ss_pred h---HHHHHHHH-HHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHH
Q 018113 284 G---FIFATFML-ASMLGSSLASRLMARSPPRVESYMQIVFVVSSVS 326 (360)
Q Consensus 284 ~---~~~~~~~~-~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 326 (360)
. .......+ +.+++.+++|+++||++.+..+.+........+.
T Consensus 366 ~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~ 412 (633)
T TIGR00805 366 AEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLS 412 (633)
T ss_pred HHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHH
Confidence 4 33343343 5678999999999999876534455444444444
No 64
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.88 E-value=3e-20 Score=170.84 Aligned_cols=262 Identities=13% Similarity=0.097 Sum_probs=164.1
Q ss_pred hhHHHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHH
Q 018113 38 FKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYI 113 (360)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~ 113 (360)
.++..+....+.......+ ....|.+.+ .|+|+++.++..+...++..++.++.|+++||+|||+++..+.++.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~ 102 (438)
T TIGR00712 24 LRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHH
Confidence 3444444444444444433 223666655 69999999999999999999999999999999999999999988888
Q ss_pred HHH-HHHhc----chHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 018113 114 LSC-ITKHS----PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (360)
Q Consensus 114 ~~~-l~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 185 (360)
++. +.... +++..+.+.|++.|++.+..++.... .+.|. ++|+...+...... . ++..+++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~-~i~~~~~~~~rg~~~~~~~~~~----~----~g~~~~~~l 173 (438)
T TIGR00712 103 AVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGR-TMVHWWSQSERGTIVSIWNCAH----N----IGGGIPPLL 173 (438)
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHH-HHHHhcCcccchhHHHHHHHHH----H----hHhHHHHHH
Confidence 876 44443 46777888999999999888776645 66665 55666444333222 2 333444433
Q ss_pred hhhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCC----C-C--cc-------hhHHH--HHHHH-HHHHhcchh
Q 018113 186 GNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD----P-S--ES-------KDLLT--QFRGA-AVAIASDEK 248 (360)
Q Consensus 186 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~--~~-------~~~~~--~~~~~-~~~~~~~~~ 248 (360)
.....+. ..+||..|++.+.+.++..+......+|++++ + + +. ++..+ +.++. .+.++|+++
T Consensus 174 ~~~~~~~-~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (438)
T TIGR00712 174 VLLGMAW-FNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKL 252 (438)
T ss_pred HHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCch
Confidence 3322221 12456677776555544333332223332110 0 0 00 00000 01111 124678888
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 018113 249 IALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPR 311 (360)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 311 (360)
++.......+.....+. ...|.|.|+++..+.+. +.......+.+++++++.+++.||++++
T Consensus 253 ~~~~~~~~~~~~~~~~~-~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 317 (438)
T TIGR00712 253 LWYIAIANVFVYLLRYG-VLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKG 317 (438)
T ss_pred HHHHHHHHHHHHHHHHH-HHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 88876655555544455 57789999987666554 4566677888999999999999999654
No 65
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.88 E-value=3.2e-22 Score=174.06 Aligned_cols=259 Identities=17% Similarity=0.126 Sum_probs=178.7
Q ss_pred hHHHHHHHHHHHHHhhhh---hH-HHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHH
Q 018113 39 KNNYLLVYSLMMAGDWLQ---GP-YVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL 114 (360)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~ 114 (360)
.+..+.+.++...++..| .+ ..+.+++.+|+++++.|++.+...+..++.+|+.|.++||++||+++..|..++.+
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~ 110 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTL 110 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHH
Confidence 344555666667777777 23 37888999999999999999999999999999999999999999999999999999
Q ss_pred HH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 018113 115 SC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLV 190 (360)
Q Consensus 115 ~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~ 190 (360)
+. ++++++.+|+++++|.+.|+|.+...|.+.+ +++|. .+|++.. ..+..+...|+++|.+.+..++..
T Consensus 111 Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s-~IaD~f~~~~Rs~~~----~ify~~ipvGsglG~vvgs~va~~-- 183 (493)
T KOG1330|consen 111 AVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPS-LIADSFPDDKRSRVL----GIFYFAIPVGSGLGYVVGSVVASL-- 183 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhhcccchh-HhhhcCcchhhhHHH----HHhhhhcccccceeEEeeeeeccC--
Confidence 87 8899999999999999999999999999966 99987 5666633 344445555555555555544443
Q ss_pred cccCCCCchhhhhhHHHHHHHHHHHhhhhccccC-CCCcchh------HHHHHHHHHHHHhcchhHHHHHHHHHHHHhhH
Q 018113 191 DSFSLGPVAPFDAAACFLAIGMVIILSSWTENYG-DPSESKD------LLTQFRGAAVAIASDEKIALLGAIQSLFEGSM 263 (360)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
.+| ||+.|...+++.++..++.....+|+++ ..++.+. ......++.+...|++.+....+.....++..
T Consensus 184 --~~~-Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~ 260 (493)
T KOG1330|consen 184 --TFW-WRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVI 260 (493)
T ss_pred --ccc-eEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhc
Confidence 444 7788888888887777776555554432 1111111 11222334445556555554444444444333
Q ss_pred HHHHHhhhccccC-----CCCCcchh-HHHHHHHHHHHHHHHHHHHHHhhc
Q 018113 264 YTFVFLWTPALSP-----NDEEIPHG-FIFATFMLASMLGSSLASRLMARS 308 (360)
Q Consensus 264 ~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~ 308 (360)
.. +..|.|.+.. .+...+.+ ....+...++.+|.+.+|.++||+
T Consensus 261 Gs-~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~ 310 (493)
T KOG1330|consen 261 GS-LSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKL 310 (493)
T ss_pred cc-cchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHH
Confidence 33 3445554332 11223333 455667788889999999999984
No 66
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.87 E-value=1.5e-19 Score=161.82 Aligned_cols=255 Identities=16% Similarity=0.100 Sum_probs=154.9
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhh-----cchHHH-HHHHHHHHHHH-HHHhc---chHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-----GRKRAC-VTYCLTYILSC-ITKHS---PQYKI 126 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-----Grr~~l-~~~~~~~~~~~-l~~~~---~~~~~ 126 (360)
.+.+|.+.+|+|+|.+++|...... +...+ ++++|+++||+ ||||.+ +.+.+..++.. ..++. .+.+.
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~~~~~~-~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~ 85 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGFFSLVG-LPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPL 85 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHHHHHHH-HHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHH
Confidence 4568899999999999999886553 32333 78999999998 898974 56666666654 55565 45556
Q ss_pred HHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccC------CCC
Q 018113 127 LMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS------LGP 197 (360)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~------~~~ 197 (360)
+....++.+.+.+...+...+ ++.|. ++|++..+....... +|..+++.++..+.+..+ |.|
T Consensus 86 l~~~~~~~~~~~~~~~~~~~a-~~~~~~~~~~r~~~~~~~~~~~~--------~G~~~~~~l~~~l~~~~g~~~~~~~~w 156 (356)
T TIGR00901 86 LAGLAFLIAFFSATQDIALDA-WRLEILSDEELGYGSTIYIVGYR--------AGMLLSGSLALVLASPEFANTGLITLW 156 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHhCCHhhhchHHHHHHHHHH--------HHHHHHHHHHHHHhhhccccccccccc
Confidence 677777888877777676655 77775 666665444443333 333333333333333222 558
Q ss_pred chhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchh---HHHHHHHHHHHHhhHHHHHHhhhccc
Q 018113 198 VAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEK---IALLGAIQSLFEGSMYTFVFLWTPAL 274 (360)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (360)
|..|.+.++..++..+......+|++++++++++..++.++..++++++|. .+.......+.....+. ...+.|.|
T Consensus 157 r~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 235 (356)
T TIGR00901 157 GYIFFWTALLILPGLLVTLFLAKEPQEDASVPKPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSA-ATVLTTLF 235 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 888887777666555444222344322211111222233445566777765 55554444444444444 56778888
Q ss_pred cCCCCCcchh---HHHHHHH-HHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHH
Q 018113 275 SPNDEEIPHG---FIFATFM-LASMLGSSLASRLMARSPPRVESYMQIVFVVSSVS 326 (360)
Q Consensus 275 ~~~~~~~~~~---~~~~~~~-~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 326 (360)
.++ .+.+.. ....... +..+++.++++++.||+|+|+ .+..+..+..+.
T Consensus 236 l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~--~l~~~~~~~~~~ 288 (356)
T TIGR00901 236 LLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILY--ALLLFGIVQALT 288 (356)
T ss_pred HHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHH--HHHHHHHHHHHH
Confidence 776 566553 3343333 567789999999999999885 333444443333
No 67
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.87 E-value=4.6e-20 Score=167.13 Aligned_cols=246 Identities=19% Similarity=0.239 Sum_probs=147.4
Q ss_pred HHHHHHHhhC--CChhhhHHHHH-----HHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHH-----
Q 018113 59 YVYYLYSTYG--FGKGEIGQLFI-----AGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYK----- 125 (360)
Q Consensus 59 ~~~~~~~~~g--~s~~~~g~~~~-----~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~----- 125 (360)
..+.+.+++. .++++.+...+ ..++...+++++.|+++||+|||+++..+.++..++. +++++++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (394)
T TIGR00883 15 AAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIW 94 (394)
T ss_pred HHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHH
Confidence 3555566543 44556655433 3444445678899999999999999999999998877 778888765
Q ss_pred ---HHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc--ccCCCC
Q 018113 126 ---ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD--SFSLGP 197 (360)
Q Consensus 126 ---~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~--~~~~~~ 197 (360)
.+++.|+++|++.+...+.... ++.|. ++|++..+..... ..+|..+++.++..+...+.+ ...++|
T Consensus 95 ~~~~~~~~r~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~----~~~G~~i~~~~~~~~~~~~~~~~~~~~~w 169 (394)
T TIGR00883 95 APILLLLARLIQGFSLGGEWGGAAL-YLAEYAPPGKRGFYGSFQQVG----APVGLLLAALTVLLLSYLLGDDALLEWGW 169 (394)
T ss_pred HHHHHHHHHHHHHhhccccccccHH-HhhhcCCcccchHHHHHHHHH----HHHHHHHHHHHHHHHHHhcCHHHhhccch
Confidence 4788999999999988887755 77776 5566544433333 333333333333332221111 124677
Q ss_pred chhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchh--HHHHHHHHHHHHhhHHHHHHhhhcccc
Q 018113 198 VAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEK--IALLGAIQSLFEGSMYTFVFLWTPALS 275 (360)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (360)
|.++.+...+.++..... ...+|++++++++++ .++.+++.++.+++++ ++.......+... .+.....+.|.|.
T Consensus 170 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 246 (394)
T TIGR00883 170 RIPFLVSAVLVLIGLYLR-RNLEETPVFEKAQEK-HKKKRGPIRETLTKHRKPFLLGLGLVIATTT-TFYLITTYLPTYL 246 (394)
T ss_pred HHHHHHHHHHHHHHHHHH-HhcCCChhHHHHHhc-cccccCCHHHHHHhchHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 788877665554443332 333433221111000 1111122334455544 4443333333333 3333567888888
Q ss_pred CCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 276 PNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 276 ~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
+++.+.+. +.......+...++.++.+++.||+|||+
T Consensus 247 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 286 (394)
T TIGR00883 247 TQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRP 286 (394)
T ss_pred HHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 66555544 45556677888999999999999999885
No 68
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.87 E-value=1.1e-19 Score=164.16 Aligned_cols=260 Identities=14% Similarity=0.093 Sum_probs=164.4
Q ss_pred HHHHHHhhhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcch----HHHHHHHHHHHHHH-HHHhc
Q 018113 47 SLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRK----RACVTYCLTYILSC-ITKHS 121 (360)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr----~~l~~~~~~~~~~~-l~~~~ 121 (360)
+......+...|++|.+.+|+|.|.+++|.+.+...+...+.+++.|+++||+||| +.+.+..... .. ....+
T Consensus 14 ~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~ 91 (382)
T PRK11128 14 FGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGA 91 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhc
Confidence 33344456678999999999999999999999999999999999999999999984 3332222111 22 33446
Q ss_pred chHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchh
Q 018113 122 PQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAP 200 (360)
Q Consensus 122 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~ 200 (360)
++++.+++.|++.|++.+...+...+ +..+. ++|++..+..+... . +|..++|.+++.+.++. +|+..
T Consensus 92 ~~~~~l~i~~~l~g~~~~~~~~~~~a-~~~~~~~~~~~a~~~~~~~~----~----lg~~igp~lgg~l~~~~--g~~~~ 160 (382)
T PRK11128 92 HSFWLLFVAIGLFNLFFSPLVPLTDA-LANTWQKQIGLDYGKVRLWG----S----IAFVIGSALTGKLVSWF--GEQAI 160 (382)
T ss_pred ccHHHHHHHHHHHHHHHcccccHHHH-HHHHHHhhccCCcchHHHHH----H----HHHHHHHHHHHHHHHHc--ChhHH
Confidence 88999999999999998888787644 55555 45555433333222 2 55566666666666554 45566
Q ss_pred hhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCC
Q 018113 201 FDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE 280 (360)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (360)
|+..+...++..+.. ...||++++++++++ .++..++.++++|+|+++.......+....... ...+.|.|.++ .+
T Consensus 161 f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~-~g 236 (382)
T PRK11128 161 LWILTAGVASMLLGQ-LLRPTIMPQGESRQQ-ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAA-YYGFSAIYWQA-AG 236 (382)
T ss_pred HHHHHHHHHHHHHHH-HccCCCCCccccccc-cccccchHHHHHcChhHHHHHHHHHHHHHHhHh-HHHHHHHHHHH-CC
Confidence 766554443333322 233433222111111 111123456889999998776655555444333 35566767654 34
Q ss_pred cch---hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHH
Q 018113 281 IPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSV 325 (360)
Q Consensus 281 ~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 325 (360)
.+. +.......+..++.....+++.||+++|+ .+..+.....+
T Consensus 237 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~--~l~~~~~~~~~ 282 (382)
T PRK11128 237 YSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARD--LLLLSAICGVV 282 (382)
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH--HHHHHHHHHHH
Confidence 443 55666667788888899999999999884 34444443333
No 69
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.86 E-value=9.7e-20 Score=169.33 Aligned_cols=255 Identities=15% Similarity=0.152 Sum_probs=149.7
Q ss_pred hHHHHHHHHhhCCC--------hhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHh---cchH
Q 018113 57 GPYVYYLYSTYGFG--------KGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH---SPQY 124 (360)
Q Consensus 57 ~~~~~~~~~~~g~s--------~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~---~~~~ 124 (360)
.+..|.+.++++.+ ..+.+++.+...++..+++++.|+++||+|||+++..+.++..++. ++.+ ..++
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (481)
T TIGR00879 48 GGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSV 127 (481)
T ss_pred hhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 34567777777776 8899999999999999999999999999999999999999988876 5533 3445
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhh---hhhhcccCCCCc
Q 018113 125 KILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG---NLLVDSFSLGPV 198 (360)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~---~~l~~~~~~~~~ 198 (360)
+.+++.|++.|++.+...+.... +++|. ++|++..+...... . +|..+++.++ ....+. .+||
T Consensus 128 ~~~~~~r~l~G~~~~~~~~~~~~-~i~~~~~~~~r~~~~~~~~~~~----~----~G~~~~~~~~~~~~~~~~~--~~w~ 196 (481)
T TIGR00879 128 EMLIVGRVLLGIGVGIASALVPM-YLSEIAPKALRGALTSLYQLAI----T----FGILVAYGFGSGKVSLNNT--LGWR 196 (481)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHH-HHHccCChhhhhhhhhHHHHHH----H----HHHHHHHHHHHHhhcCCCC--ccHH
Confidence 68999999999999998887755 88886 55666444333222 2 4444444444 332233 3566
Q ss_pred hhhhhhHHHHHHHHHHHhhhhccccC------CCCcchhHHHH-----------HH-----------------HHHHHHh
Q 018113 199 APFDAAACFLAIGMVIILSSWTENYG------DPSESKDLLTQ-----------FR-----------------GAAVAIA 244 (360)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-----------~~-----------------~~~~~~~ 244 (360)
..|.+.....++..... ...||++. +.++.++..++ .+ +..++.+
T Consensus 197 ~~f~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (481)
T TIGR00879 197 IPLGLQLIPAGLLFLGL-FFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLF 275 (481)
T ss_pred HHHHHHHHHHHHHHHHH-hcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHH
Confidence 66766544443333322 33343211 10000000000 00 0001122
Q ss_pred cc-----hhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHH
Q 018113 245 SD-----EKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYM 316 (360)
Q Consensus 245 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~ 316 (360)
+. ++.........+...........+.|.+.++ .+.+. +.......++.+++.++.++++||++||+ ..
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~--~~ 352 (481)
T TIGR00879 276 SSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRP--LL 352 (481)
T ss_pred hcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH--HH
Confidence 21 2222222222222222222234555655543 23333 45566677888999999999999999985 33
Q ss_pred HHHHHHHHHH
Q 018113 317 QIVFVVSSVS 326 (360)
Q Consensus 317 ~~~~~~~~~~ 326 (360)
..+.....++
T Consensus 353 ~~~~~~~~~~ 362 (481)
T TIGR00879 353 LIGAAGMAIC 362 (481)
T ss_pred HHHHHHHHHH
Confidence 3343333333
No 70
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.86 E-value=1e-19 Score=165.32 Aligned_cols=235 Identities=23% Similarity=0.221 Sum_probs=174.0
Q ss_pred HhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHh--cchHHHHHHHHHHHHhHhhhh
Q 018113 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH--SPQYKILMIGRILGGIATSLL 141 (360)
Q Consensus 65 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~--~~~~~~l~~~r~l~G~~~~~~ 141 (360)
.++++|+.|.+++++..+.+..+...+.|+++||+|.|+++..+.++.+++. +... ..+++.+++.|+++|++.|..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 4688999999999999999999999999999999999999999999999976 6544 345568899999999999999
Q ss_pred hhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHhhh
Q 018113 142 FSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSS 218 (360)
Q Consensus 142 ~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (360)
+|+... +.+++ +||++..+.... |..+|.+++-.+++.+.+. .++|+.+|++.+.+.++..++....
T Consensus 146 ~pa~~~-i~~~W~P~~Ers~~~ail~~--------g~q~g~v~~mp~sg~lc~s-~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 146 FPAIGS-ILAKWAPPNERSTFIAILTA--------GSQLGTIITMPVSGLLCES-SLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred Hhhhhc-eeeeECCHHHHHHHHHHHHH--------HHHHHHHHHHHhHHHHhcc-CCCCchHHHHHHHHHHHHHHHHHHH
Confidence 998866 77776 677774444333 3345666666666666665 3567788888777666555544333
Q ss_pred hccccCCCCc-chhHHHHH-------------HHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch-
Q 018113 219 WTENYGDPSE-SKDLLTQF-------------RGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH- 283 (360)
Q Consensus 219 ~~~~~~~~~~-~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 283 (360)
..|++.+.+. .+++.+.+ ..+++++++++++|...+...+.....+. +.+|.|.|+++..+.+.
T Consensus 216 ~~d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~-l~~y~PtY~~~VL~f~v~ 294 (466)
T KOG2532|consen 216 YSDSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYL-LLTYLPTYLKEVLGFDVR 294 (466)
T ss_pred hcCCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHH-HHHHhhHHHHHHhCCChh
Confidence 3322221110 11111111 12578999999999987666665555555 79999999998887765
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 018113 284 --GFIFATFMLASMLGSSLASRLMARSPP 310 (360)
Q Consensus 284 --~~~~~~~~~~~~~~~~~~g~l~dr~g~ 310 (360)
|...++..+...+..+++|.++||..+
T Consensus 295 ~~G~~salP~l~~~~~k~~~g~lsD~l~~ 323 (466)
T KOG2532|consen 295 ETGFLSALPFLAMAIVKFVAGQLSDRLTF 323 (466)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 677788899999999999999999866
No 71
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.86 E-value=3.3e-19 Score=161.96 Aligned_cols=260 Identities=14% Similarity=0.063 Sum_probs=153.8
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHH-HHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-H
Q 018113 40 NNYLLVYSLMMAGDWLQGPYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-I 117 (360)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l 117 (360)
|......++.....+...|++|.. .+++|.|+.+.|.+.+...+...+.+++.|+++||+|||+.++.+....+++. .
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~ 84 (396)
T TIGR00882 5 WMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAP 84 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 444444455555555567886655 45789999999999999999999999999999999999999988776665533 1
Q ss_pred ---HHhcc-----hHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 018113 118 ---TKHSP-----QYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL 188 (360)
Q Consensus 118 ---~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (360)
..+.+ ......+.+++.|++.+...+.... +..|. ++++...+.... ... +|..+++.+++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~----~~~----~g~~~g~~~~g~ 155 (396)
T TIGR00882 85 FFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEA-YIEKVSRNSNFEYGKARM----FGC----VGWALCASIAGI 155 (396)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHH-HHHHhhhhcccccchhhh----hcc----cHHHHHHHHHhh
Confidence 12222 2234566788888888877777644 55554 323221111111 222 444555555554
Q ss_pred hhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCcch----hHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHH
Q 018113 189 LVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESK----DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMY 264 (360)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (360)
+.+ ++|+.+|++.+.+.++..+......+|+++++++++ +..++..++.++++|||+++.......+......
T Consensus 156 l~~---~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~ 232 (396)
T TIGR00882 156 LFS---IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANASAFSLKLALELFRQRKFWMFVLYVVGVACVYD 232 (396)
T ss_pred hhc---cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 433 356678877766655544444222232211110000 0001111245678899988766554444332222
Q ss_pred HHHHhhhccccCCCC---Ccc---hhHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 265 TFVFLWTPALSPNDE---EIP---HGFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 265 ~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
. ...+.|.|.++.. +.+ .+...+...+...++....+++.||+|+|+
T Consensus 233 ~-~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~ 285 (396)
T TIGR00882 233 V-FDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKN 285 (396)
T ss_pred H-HHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 2 3334555543322 222 255666667778888899999999999985
No 72
>TIGR00898 2A0119 cation transport protein.
Probab=99.85 E-value=9.1e-20 Score=170.90 Aligned_cols=256 Identities=14% Similarity=0.082 Sum_probs=163.7
Q ss_pred HHHHHHHHhhCCC---hhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHH
Q 018113 58 PYVYYLYSTYGFG---KGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRIL 133 (360)
Q Consensus 58 ~~~~~~~~~~g~s---~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l 133 (360)
+..|.+.+|+|++ +.+.++..+...++..+++++.|+++||+|||++++.+.++.+++. +.+++++++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 4577888999999 8899999999999999999999999999999999999999988877 77899999999999999
Q ss_pred HHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHH
Q 018113 134 GGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (360)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 210 (360)
.|++.+...+.... ++.|. ++|++..+.. ..+..+|.++++.++..+. +||..+++.++..++
T Consensus 190 ~G~~~~~~~~~~~~-~~~e~~~~~~r~~~~~~~--------~~~~~~g~~~~~~~~~~~~-----~wr~~~~~~~i~~~~ 255 (505)
T TIGR00898 190 VGMGIGGIWVQAVV-LNTEFLPKKQRAIVGTLI--------QVFFSLGLVLLPLVAYFIP-----DWRWLQLAVSLPTFL 255 (505)
T ss_pred HHhhccchHHHHHH-HhheecChhhhHHHHHHH--------HHHHHHHHHHHHHHHHHhh-----HHHHHHHHHHHHHHH
Confidence 99999998888755 88887 4455532222 2233355555555554432 255666666555544
Q ss_pred HHHHHhhhhccccC------CCCcchhHH---------------------HH---H--HHHHHHHhcchhHHHHHHHHHH
Q 018113 211 GMVIILSSWTENYG------DPSESKDLL---------------------TQ---F--RGAAVAIASDEKIALLGAIQSL 258 (360)
Q Consensus 211 ~~~~~~~~~~~~~~------~~~~~~~~~---------------------~~---~--~~~~~~~~~~~~~~~~~~~~~~ 258 (360)
..+.. ...||+++ +.+++++.. ++ . +...++++++|+++...+...+
T Consensus 256 ~~~~~-~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 334 (505)
T TIGR00898 256 FFLLS-WFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMM 334 (505)
T ss_pred HHHHH-HhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHH
Confidence 44333 33444321 111110000 00 0 0134567778777665554443
Q ss_pred HHhhHHHHHHhhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHhHh
Q 018113 259 FEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIV 332 (360)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 332 (360)
....... ..+...+..+..+.+.........+..+++.++.+++.||+|||+ .+.....+.++++.....
T Consensus 335 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~--~~~~~~~~~~~~~l~~~~ 404 (505)
T TIGR00898 335 LWFTTAF--SYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRY--TMAASLLLAGVALLLLLF 404 (505)
T ss_pred HHHHHHH--HHHHHhccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCHH--HHHHHHHHHHHHHHHHHH
Confidence 3322211 122222222233344445555667788899999999999999984 444444444444444333
No 73
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.85 E-value=1.4e-18 Score=158.04 Aligned_cols=248 Identities=16% Similarity=0.100 Sum_probs=155.9
Q ss_pred HHhhhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhh-----cchH-HHHHHHHHHHHHH-HHHhc--
Q 018113 51 AGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-----GRKR-ACVTYCLTYILSC-ITKHS-- 121 (360)
Q Consensus 51 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-----Grr~-~l~~~~~~~~~~~-l~~~~-- 121 (360)
...++..+.+|.+.++.|+|.+++|.+...... .+..+++|+++||+ |||| .+..+.+..+++. ..++.
T Consensus 13 ~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~ 90 (402)
T PRK11902 13 LPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPP 90 (402)
T ss_pred hhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCc
Confidence 334444667899999999999999998666664 58889999999999 8876 6777777777765 55554
Q ss_pred -chHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCC
Q 018113 122 -PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGP 197 (360)
Q Consensus 122 -~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~ 197 (360)
++++.+.+..++.+...+...+...+ ++.|. ++|++..+.... |+.+|.++++.++..+.+.. ++|
T Consensus 91 ~~~~~~l~~~~~~~~~~~~~~~~~~~a-l~~~~~~~~~r~~~~~~~~~--------g~~~g~i~g~~l~~~l~~~~-~gw 160 (402)
T PRK11902 91 HAALWPLAGLAVLVAFLSASQDIVFDA-YSTDVLHPEERGAGAAVKVL--------GYRLAMLVSGGLALWLADRV-LGW 160 (402)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcChhhhhHHHHHHHH--------HHHHHHHHHhHHHHHHHhcc-cCH
Confidence 35677777777888877777777655 77776 446664444443 33344444444444444421 467
Q ss_pred chhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCC
Q 018113 198 VAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN 277 (360)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (360)
|..|++.+++.++..+.. ...||++.+++++++..++..++.++++|||.++.......+....... ...+.+.+..+
T Consensus 161 ~~~f~i~a~~~l~~~l~~-~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~-~~~~~~~~l~~ 238 (402)
T PRK11902 161 GNTYLLMAGLMLAGALTT-LWAPEPEVPARPPRSLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAF-AGSLSTTFLIR 238 (402)
T ss_pred HHHHHHHHHHHHHHHHHH-HhcCCCcccccccchhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHH-HHHHHHHHHHH
Confidence 778877666555444433 3445443322222222223445667889999887765554444433222 12233334444
Q ss_pred CCCcchh---HHHHHH-HHHHHHHHHHHHHHHhhcCCCh
Q 018113 278 DEEIPHG---FIFATF-MLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 278 ~~~~~~~---~~~~~~-~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
+.+.++. ...... .++.+++.++.+++.||+++|+
T Consensus 239 ~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~ 277 (402)
T PRK11902 239 GAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYR 277 (402)
T ss_pred hcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 4565553 333333 3457889999999999999885
No 74
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.85 E-value=1.6e-18 Score=148.97 Aligned_cols=265 Identities=19% Similarity=0.208 Sum_probs=188.8
Q ss_pred hhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HH---HhcchHHHHHH
Q 018113 54 WLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT---KHSPQYKILMI 129 (360)
Q Consensus 54 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~---~~~~~~~~l~~ 129 (360)
....+.+|.+.+.++++..|.+.+..+.+.+..+.+++.|.+.||+|+|+.++.+..++++++ +. +...++..+++
T Consensus 30 ~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~ 109 (422)
T COG0738 30 CLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLV 109 (422)
T ss_pred hcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH
Confidence 333678999999999999999999999999999999999999999999999999999999987 44 34678899999
Q ss_pred HHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-----------cCC
Q 018113 130 GRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS-----------FSL 195 (360)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~-----------~~~ 195 (360)
+-++.|.|.+...+++++ +++.. ++..++.+..+..++ +|.+++|++++.++.+ ..|
T Consensus 110 ~lFila~Gi~~LetaaNp-~v~~lg~~~~a~~rlnl~q~fn~--------lGa~~gp~~g~~lils~~~~~~~~~~~~~~ 180 (422)
T COG0738 110 ALFILASGIGLLETAANP-YVTLLGKPESAAFRLNLAQAFNG--------LGAILGPLLGSSLILSGVALTMSAAQILAI 180 (422)
T ss_pred HHHHHHhhhHHHHhccch-HHHHhCCchhHHHHHHHHHHhhh--------hHHHHHHHHHHHHHHhhhhhccCHHHHHHH
Confidence 999999999999999988 87765 334455555555555 5555556555555441 001
Q ss_pred ------CCchhhhhhHHHHHHHHHHHh-hhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHH
Q 018113 196 ------GPVAPFDAAACFLAIGMVIIL-SSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVF 268 (360)
Q Consensus 196 ------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (360)
.++.+|...+...++..+... .+.|+.++.+++..+..+ ....+++|+|+.+...+..++..+.... ..
T Consensus 181 ~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~~---~~~~~l~~~~~~~~gvl~~FlYVG~Eva-~g 256 (422)
T COG0738 181 KGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASGS---AGLSSLFQNKHLRLGVLAIFLYVGAEVA-IG 256 (422)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccccccccccc---chHHHHHhChHHHHHHHHHHHHHhHHHH-HH
Confidence 245667666555444444332 344444332222111111 1445789999999988888887777666 68
Q ss_pred hhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHhHhc
Q 018113 269 LWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVT 333 (360)
Q Consensus 269 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 333 (360)
.|++.|+.+..+.+. +...+.+..+.++|++++.++.+|++.. +++.....+....+....+.
T Consensus 257 sfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~--k~Laf~a~~~ill~~~~~l~ 322 (422)
T COG0738 257 SFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE--KYLAFYALIAILLLLAVALI 322 (422)
T ss_pred HHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHHHHHHh
Confidence 899999887656554 3566777889999999999999999776 44555544444444444443
No 75
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.85 E-value=1.9e-18 Score=160.61 Aligned_cols=246 Identities=16% Similarity=0.121 Sum_probs=154.2
Q ss_pred hhhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhh-----cchHH-HHHHHHHHHHHH-HHHhc---c
Q 018113 53 DWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-----GRKRA-CVTYCLTYILSC-ITKHS---P 122 (360)
Q Consensus 53 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-----Grr~~-l~~~~~~~~~~~-l~~~~---~ 122 (360)
.....+.+|...++.|.|.+++|........ .+..+++|+++||+ ||||. +..+.+..+++. .+++. +
T Consensus 28 ~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~ 105 (491)
T PRK11010 28 LALTSGTLQAWMTVENIDLKTIGFFSLVGQA--YVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGT 105 (491)
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 3444677889999999999999986333332 35778899999999 99986 556666666665 55554 4
Q ss_pred hHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCch
Q 018113 123 QYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVA 199 (360)
Q Consensus 123 ~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~ 199 (360)
+++.+.+.+++.|++.+...+...+ +..|. ++|++..+... .|..+|..+++.+...+.+. .++||.
T Consensus 106 ~l~~l~~~~~l~~~~~a~~~i~~~a-~~~~~~~~~~rg~~~~i~~--------~g~~lG~llg~~l~~~l~~~-~~GWr~ 175 (491)
T PRK11010 106 QLRWLAALAVVIAFCSASQDIVFDA-WKTDVLPAEERGAGAAISV--------LGYRLAMLVSGGLALWLADR-YLGWQG 175 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcChhhhHHHHHHHH--------HHHHHHHHHHHHHHHHHHhc-ccCHHH
Confidence 6788888999999988877777645 77776 55665433333 23334555555555555542 246778
Q ss_pred hhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCC
Q 018113 200 PFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDE 279 (360)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (360)
.|++.+.+.++..+.. ...||++++++++++..++..++.++.+++++.+.......+....... ...+.+.|+.++.
T Consensus 176 ~f~i~a~l~ll~~l~~-~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~-~~~~~~~~l~~~~ 253 (491)
T PRK11010 176 MYWLMAALLIPCIIAT-LLAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAF-AMSLTTTFLIRGV 253 (491)
T ss_pred HHHHHHHHHHHHHHHH-HhcCCCccccccccchhhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhc
Confidence 8888776665554443 2345443221111111112223455677777766554444443333333 3556676765555
Q ss_pred Ccchh---HHH-HHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 280 EIPHG---FIF-ATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 280 ~~~~~---~~~-~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
|.+.. ... ....++.+++.++.|+++||+++|+
T Consensus 254 G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~ 290 (491)
T PRK11010 254 GFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFR 290 (491)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 66553 333 2335688899999999999999874
No 76
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.83 E-value=1.5e-18 Score=158.92 Aligned_cols=261 Identities=15% Similarity=0.083 Sum_probs=139.5
Q ss_pred hHHHHHHHHHHHHHhhhhhHHHHHHH-HhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-
Q 018113 39 KNNYLLVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC- 116 (360)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~- 116 (360)
.|......++.....+...|++|... +++|+|+.++|.+.+...+...+.+++.|+++||+|||++++.+....++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~ 91 (420)
T PRK09528 12 YWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFG 91 (420)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 34444444444444455567755554 4599999999999999999999999999999999999999988766555432
Q ss_pred -HHH--hcch-----HHHHHHHHHHHHhHhhhhhhhhhhHHhhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018113 117 -ITK--HSPQ-----YKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (360)
Q Consensus 117 -l~~--~~~~-----~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (360)
... .++. .....++++..|.+.....+.... +..+. +++++..+.... ... +|..+++.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~g~~~~----~~~----~g~~i~~~~~g 162 (420)
T PRK09528 92 PFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEA-YIERVSRRSGFEYGRARM----WGS----LGWALCAFIAG 162 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhh-HHHHHHhhccccchhhHH----hhh----HHHHHHHHHHH
Confidence 111 1111 111222333334333333233322 32222 333332222222 222 44455555555
Q ss_pred hhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCC---Ccch-hHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhH
Q 018113 188 LLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP---SESK-DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSM 263 (360)
Q Consensus 188 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
.+.+ .+|+.+|+..+.+.++.........+|+++++ ++++ +..+...++..+.+|||+++.......+....
T Consensus 163 ~l~~---~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~- 238 (420)
T PRK09528 163 ILFN---INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANASAVSLKDALALLKLPKFWFLVLYVIGVACF- 238 (420)
T ss_pred HHHh---cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhcccccccHHHHHHHccCCCeEeehHHHHHHHHH-
Confidence 5544 24556676666555444444422222222111 0000 00111112344677888876654433333222
Q ss_pred HHHHHhhhccccCCCC---Ccc---hhHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 264 YTFVFLWTPALSPNDE---EIP---HGFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 264 ~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
+.....+.|.|..+.. +.+ .+...+...+...++.+..|++.||+|+|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 293 (420)
T PRK09528 239 YDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKN 293 (420)
T ss_pred HHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch
Confidence 2212334554443211 222 256667777888899999999999999985
No 77
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.83 E-value=3.2e-18 Score=152.55 Aligned_cols=239 Identities=24% Similarity=0.296 Sum_probs=168.0
Q ss_pred hhhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHH
Q 018113 53 DWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGR 131 (360)
Q Consensus 53 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r 131 (360)
.....+..|.+.+++|.++.+.+...+...+...+.+++.|+++||+|||+.+..+.....++. ...+.++++.+.+.|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (352)
T cd06174 15 RGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGR 94 (352)
T ss_pred hhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 3334677889999999999999999999999999999999999999999999999999998877 677789999999999
Q ss_pred HHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHH
Q 018113 132 ILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFL 208 (360)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 208 (360)
++.|++.+...+...+ ++.|. ++|++..+..... ..+|..+++.+++.+.+..+ |+..+.......
T Consensus 95 ~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 163 (352)
T cd06174 95 FLLGLGGGALYPAAAA-LIAEWFPPKERGRALGLFSAG--------FGLGALLGPLLGGLLAESLG--WRWLFLILAILG 163 (352)
T ss_pred HHHHcccccccHhHHH-HHHHhCCccchhhhhhHHHHH--------HHHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHH
Confidence 9999999988887755 77776 4566644433322 22455555555555555544 556666665555
Q ss_pred HHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hH
Q 018113 209 AIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GF 285 (360)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 285 (360)
++..... ...+ |+++.......+....... ...+.|.+.++..+.+. +.
T Consensus 164 ~~~~~~~-~~~~--------------------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 215 (352)
T cd06174 164 LLLALLL-LFLL--------------------------RLLLLLALAFFLLSFGYYG-LLTYLPLYLQEVLGLSAAEAGL 215 (352)
T ss_pred HHHHHHH-HHHH--------------------------HHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCHHHHHH
Confidence 5444443 2222 3344444444444444333 56777877766544443 56
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHhH
Q 018113 286 IFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPI 331 (360)
Q Consensus 286 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 331 (360)
......++..++.++.+++.||+++|+ +.+..+.....+......
T Consensus 216 ~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 260 (352)
T cd06174 216 LLSLFGLGGILGALLGGLLSDRLGRRR-LLLLIGLLLAALGLLLLA 260 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHH
Confidence 677788899999999999999999883 155555555444444433
No 78
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.83 E-value=5.3e-18 Score=156.12 Aligned_cols=264 Identities=15% Similarity=0.169 Sum_probs=160.1
Q ss_pred hHH-HHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhh----hcchH-HHHHHHHHHHHHH-HHHhcch------
Q 018113 57 GPY-VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK----QGRKR-ACVTYCLTYILSC-ITKHSPQ------ 123 (360)
Q Consensus 57 ~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr----~Grr~-~l~~~~~~~~~~~-l~~~~~~------ 123 (360)
.++ .+.+.+++|+|+.++|.+.+...+...+..|+.|+++|| +|||| .++.+....+++. ++...++
T Consensus 19 ~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~ 98 (437)
T TIGR00792 19 STYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGK 98 (437)
T ss_pred HHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchH
Confidence 455 556667899999999999999999999999999999997 68755 5667777777665 5555443
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhHHhhhc----cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-ccCCCCc
Q 018113 124 YKILMIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD-SFSLGPV 198 (360)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~-~~~~~~~ 198 (360)
...+++.+++.+++.+.......+ +..|. ++|++..+...... .+|..+++.+.+.+...+.+ ...++|+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~a-l~~~~~~~~~~R~~~~~~~~~~~----~~g~~l~~~~~~~l~~~~~~~~~~~g~~ 173 (437)
T TIGR00792 99 LVYAYITYILLGLFYSFVNIPYWS-LVPAITLDPRERESLSTFRRFGA----TLGGLLVAVIVLPLVSYFGGGDDKFGWF 173 (437)
T ss_pred HHHHHHHHHHHHHHHHhhcccHhh-CcccccCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhCCCcccccHH
Confidence 345667788888887766554433 44442 56666444433333 33333333333222222111 1134677
Q ss_pred hhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCC
Q 018113 199 APFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND 278 (360)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (360)
..+.+.+++..+..+......+|++++++++++...+.++..+++++||+++.......+.....+. ...+.+.|.+..
T Consensus 174 ~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 252 (437)
T TIGR00792 174 MFALVLALIGVVSLIICFFGTKERYSEIPKNIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNI-KNGVQVYYFTYV 252 (437)
T ss_pred HHHHHHHHHHHHHHHHHHcCCEecCCCCCcccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-HcchhheeEeee
Confidence 7777777666655555444555543221111111122345566788999988776655554444433 344455555544
Q ss_pred CCcch--hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHH
Q 018113 279 EEIPH--GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLL 328 (360)
Q Consensus 279 ~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 328 (360)
.+.+. +.......++.+++.++.++++||+|+|+ ....+..+..+...
T Consensus 253 ~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~--~~~~~~~~~~~~~~ 302 (437)
T TIGR00792 253 LGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKI--LFAGGILLMVLGYL 302 (437)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH--HHHHHHHHHHHHHH
Confidence 44222 44556667889999999999999999884 44444444444333
No 79
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.82 E-value=3.3e-17 Score=145.64 Aligned_cols=237 Identities=13% Similarity=0.098 Sum_probs=148.0
Q ss_pred HH-HHHHHHhhCCChhh-hHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHH
Q 018113 58 PY-VYYLYSTYGFGKGE-IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILG 134 (360)
Q Consensus 58 ~~-~~~~~~~~g~s~~~-~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~ 134 (360)
|+ .|++.+|+|+|++| .|.+.+..+.+..+..++.|.++||+|.|+++..+.+.+++.. +.++++++..+.+.|++.
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~ll 125 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFY 125 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 88999999999999 8999999999999999999999999999999999999999977 888999999999999999
Q ss_pred HhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchh-hhhhHHHHHH
Q 018113 135 GIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAP-FDAAACFLAI 210 (360)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~ 210 (360)
|++.|... +... ++..+ ++|++..+...+. ..+|..++++++++ +...+|++... ..+......+
T Consensus 126 GvaEA~~~-A~~s-yI~~WfP~kER~ratsi~~sg--------~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~ 194 (511)
T TIGR00806 126 SVTMAARI-AYSS-YIFSLVPPSRYQRAAAYSRAA--------VLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTF 194 (511)
T ss_pred HHHHHHHH-HHHH-HHHHHCCHHHHHHHHHHHHHH--------HHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHH
Confidence 99999998 5545 77766 6677744443333 33444555555555 23345655222 2333322222
Q ss_pred HHHHHhhhhccccC------C------------C--Cc----chh--------HHHHHHHHHHHHhcchhHHHHHHHHHH
Q 018113 211 GMVIILSSWTENYG------D------------P--SE----SKD--------LLTQFRGAAVAIASDEKIALLGAIQSL 258 (360)
Q Consensus 211 ~~~~~~~~~~~~~~------~------------~--~~----~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (360)
+.++. ..+|..++ + . ++ ..+ ..+......++..+|++++...+-..+
T Consensus 195 a~~~a-~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~ 273 (511)
T TIGR00806 195 SVFLA-LFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVF 273 (511)
T ss_pred HHHHH-HhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHH
Confidence 22222 22221100 0 0 00 000 011222344456677776665555444
Q ss_pred HHhhHHHHHHhhhccccCCC----CCcchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 018113 259 FEGSMYTFVFLWTPALSPND----EEIPHGFIFATFMLASMLGSSLASRLMARS 308 (360)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 308 (360)
...+.+. +.+|....-++. .+. .|.+-++..+.+.+.++..|++-.+.
T Consensus 274 a~~g~~q-v~~Y~Q~LW~~v~~~~~~y-NG~veA~~tllga~~a~~ag~~~~~w 325 (511)
T TIGR00806 274 NSAGYYL-ITYYVHTLWGTLDESLNKY-NGAVDAASTLLGAITSFIAGFVNIRW 325 (511)
T ss_pred HhhHHHH-HHHHHHHHHHHcCCCcccc-CCHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 4444333 333333222111 112 25555666777778888889885544
No 80
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.81 E-value=1.8e-18 Score=157.60 Aligned_cols=243 Identities=14% Similarity=0.084 Sum_probs=175.8
Q ss_pred HHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHhHh
Q 018113 60 VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SCITKHSPQYKILMIGRILGGIAT 138 (360)
Q Consensus 60 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~-~~l~~~~~~~~~l~~~r~l~G~~~ 138 (360)
+..+.+|.+....+.+.+.++.+++..++.++.|.+.||++..+.+....+.+++ +.+....+|++.+++.|++.|+.+
T Consensus 69 l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~e 148 (495)
T KOG2533|consen 69 LSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFE 148 (495)
T ss_pred HcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 3345588899999999999999999999999999999999988888888888877 446667899999999999999999
Q ss_pred hhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHH
Q 018113 139 SLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (360)
Q Consensus 139 ~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (360)
+..+|.... +++.+ ++|+.+.++..+..+ +|+.+|++++.-+-..-....-.+||+.|++.+.+.++..++.
T Consensus 149 s~~wP~~~~-~lg~wy~~~e~g~r~~~~~a~~~----~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~ 223 (495)
T KOG2533|consen 149 SGGWPGVVA-ILGNWYGKSERGLRMGIWYASAS----LGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVV 223 (495)
T ss_pred cccchHHHH-HHHhhcChhhhhhhHHHHHHhcc----hhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheE
Confidence 999999966 77776 667775555444433 3443444444332110000112456677888888777777776
Q ss_pred hhhhccccCCC---Ccchh-----HH---------H-HHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCC
Q 018113 216 LSSWTENYGDP---SESKD-----LL---------T-QFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN 277 (360)
Q Consensus 216 ~~~~~~~~~~~---~~~~~-----~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (360)
+..+|+++.+. ++.++ .. + ......++.+++|++|..+++..+.....+. ..+|+|.|.++
T Consensus 224 f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~-~~~~lpl~l~~ 302 (495)
T KOG2533|consen 224 FFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYG-FSYWLPLYLKS 302 (495)
T ss_pred EEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhcccc-HHHHHHHHHHc
Confidence 65555544311 11110 00 0 1123466889999999999998888887777 58999999988
Q ss_pred CCCcch---hHHHHHHHHHHHHHHHHHHHHHhhc
Q 018113 278 DEEIPH---GFIFATFMLASMLGSSLASRLMARS 308 (360)
Q Consensus 278 ~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~ 308 (360)
..+.+. +.+.....++++++.+++|.++||.
T Consensus 303 ~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 303 NGGYSELQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred CCCcChHHhccccchHHhhhHHHHHHHHHHHHHH
Confidence 544544 4566778899999999999999995
No 81
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.81 E-value=1.7e-17 Score=151.36 Aligned_cols=262 Identities=11% Similarity=-0.006 Sum_probs=157.3
Q ss_pred HHHHHHhhhhhHH-HHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcc-hHHHHHHHHHHHHHH-HHHhcch
Q 018113 47 SLMMAGDWLQGPY-VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR-KRACVTYCLTYILSC-ITKHSPQ 123 (360)
Q Consensus 47 ~~~~~~~~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Gr-r~~l~~~~~~~~~~~-l~~~~~~ 123 (360)
++.....+...|+ .+.+.+++|+|.+|+|++.+...++..+++++.|.++||+|| |+++.++.+..+++. +..+.++
T Consensus 12 ~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~ 91 (418)
T TIGR00889 12 FLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTT 91 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3334444445444 666778899999999999999999999999999999999965 778887777776665 6678889
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhHH---hh----h---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccc
Q 018113 124 YKILMIGRILGGIATSLLFSAFESWL---VA----E---HNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF 193 (360)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~---i~----~---~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~ 193 (360)
++.+.+.|++.|++.+...+...+.. .. | ..+|.+. .- .+|..+|+.++ +.+..
T Consensus 92 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~------~G----~lG~~ig~~l~----g~l~~-- 155 (418)
T TIGR00889 92 PAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRV------MG----TIGFIAAMWAV----SLLDI-- 155 (418)
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeee------eh----hHHHHHHHHHH----HHhcc--
Confidence 99999999999998776666554421 11 1 1122221 10 13444444444 43311
Q ss_pred CCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCcc-hhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhc
Q 018113 194 SLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSES-KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTP 272 (360)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (360)
...|+ ++++.+.+.++..+.. ...||++++++++ ++..++...+.++++|+|+++.......+....... ...+.|
T Consensus 156 ~~~~~-~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~-~~~~~~ 232 (418)
T TIGR00889 156 ELSNI-QLYITAGSSALLGVFA-LTLPDIPVAKSTAKMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQI-TNIFGN 232 (418)
T ss_pred cchhH-HHHHHHHHHHHHHHHH-hcCCCCCCCccccccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHH-HHHhHH
Confidence 12232 4545444444444333 3455543222211 111111112344678899887765555554333322 345556
Q ss_pred cccCCCC-C--------cc-hhHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHH
Q 018113 273 ALSPNDE-E--------IP-HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLL 329 (360)
Q Consensus 273 ~~~~~~~-~--------~~-~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 329 (360)
.+.++.. + .+ .+...+...+..+++.+..+++.||+|+|+ .+..+.....+....
T Consensus 233 ~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~--~l~~~~~~~~v~~~l 297 (418)
T TIGR00889 233 GFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKK--VMLLSLVAWALRFGF 297 (418)
T ss_pred HHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH--HHHHHHHHHHHHHHH
Confidence 5554421 1 11 256667778889999999999999999984 455555444444333
No 82
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.80 E-value=1.8e-17 Score=169.75 Aligned_cols=257 Identities=16% Similarity=0.085 Sum_probs=159.9
Q ss_pred HHHHHHHHHHHhhhhh-H---H-HHHHHHhhCCCh-hhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHH---HH
Q 018113 42 YLLVYSLMMAGDWLQG-P---Y-VYYLYSTYGFGK-GEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL---TY 112 (360)
Q Consensus 42 ~~~~~~~~~~~~~~~~-~---~-~~~~~~~~g~s~-~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~---~~ 112 (360)
++...++..+.+++.. . . .+.+.++.+.+. ...++..+...+...+.+++.|.++||+|||+++..... ..
T Consensus 16 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~ 95 (1140)
T PRK06814 16 LFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGI 95 (1140)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHH
Confidence 3344455556555542 1 1 122323333333 345677778888888999999999999999997643222 22
Q ss_pred HHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 018113 113 ILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL 188 (360)
Q Consensus 113 ~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (360)
.... .....++++.++++|+++|++.+...|...+ ++.+. ++|++..++.....+ +|.++++.++++
T Consensus 96 ~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a-~l~~~~~~~~~~~a~~~~~~~~~--------ig~~igp~l~g~ 166 (1140)
T PRK06814 96 AALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS-ILPDHLNKDELLGANALVEAGTF--------IAILLGTIIGGL 166 (1140)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH-hhHhhcCccccchhhHHHHHHHH--------HHHHHHHHHHHH
Confidence 2222 3334589999999999999999999888866 77775 556665544443333 455555555555
Q ss_pred hhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCc---chhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHH
Q 018113 189 LVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSE---SKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYT 265 (360)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (360)
+.+..+| +..|.......++..+ .....++.++++++ ..+..++.....+.+.+++.++...+...+.......
T Consensus 167 l~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (1140)
T PRK06814 167 ATISGNF--VILVALLMGIAVLGWL-ASLFIPKTGNAAPDLKIDRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAV 243 (1140)
T ss_pred HHhcccc--HHHHHHHHHHHHHHHH-HHhhCCCCCCCCCCCeeccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 5555444 4455333333333222 22344443322111 1112233445677888999888877666665555444
Q ss_pred HHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 018113 266 FVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPR 311 (360)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 311 (360)
...+.|.|.++..+.+. +...+...++.++|.+..+++.||..++
T Consensus 244 -~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~ 291 (1140)
T PRK06814 244 -VLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITL 291 (1140)
T ss_pred -HHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceee
Confidence 46788999887766654 5677788899999999999999887655
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.80 E-value=3.6e-17 Score=167.88 Aligned_cols=245 Identities=14% Similarity=0.006 Sum_probs=152.8
Q ss_pred hHHHHHHHHhhCCChhh--hHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH----HHHhcchHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGE--IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC----ITKHSPQYKILMIG 130 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~--~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~----l~~~~~~~~~l~~~ 130 (360)
....+.+.++++.+.+. .+++.++..++..++++++|+++||+|||++++.+.++..+.. ++...++++.+++.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 109 (1146)
T PRK08633 30 ILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAV 109 (1146)
T ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 34466666777765443 5788888888888999999999999999999998887655533 33456789999999
Q ss_pred HHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc--------cCCCCch
Q 018113 131 RILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS--------FSLGPVA 199 (360)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~--------~~~~~~~ 199 (360)
|+++|++.+...+...+ ++.|. ++|++..+......+ +|. ++++.+++.+.+. .+|.+..
T Consensus 110 r~l~G~~~~~~~~~~~~-~i~~~~~~~~r~~~~~~~~~~~~----ig~----~lg~~l~~~l~~~~~~~~~~~~~~~~~~ 180 (1146)
T PRK08633 110 TFLLGAQSAIYSPAKYG-IIPELVGKENLSRANGLLEAFTI----VAI----LAGTALFSFLFESVNGNTPSEILGRIAP 180 (1146)
T ss_pred HHHHHHHHHhhchHHHh-hhHHhcCcccchhhhhHHHHHHH----HHH----HHHHHHHHHHHHhhccccccccccchHH
Confidence 99999999998888755 77876 667775555444433 333 3333333333332 1122111
Q ss_pred hhhhhHHHHHHHHHHHhhhhccccCCCCc-----chhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccc
Q 018113 200 PFDAAACFLAIGMVIILSSWTENYGDPSE-----SKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (360)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (360)
.+.......++..+.. ...|+.++..++ .....+......+.+++++.++...+...+....... ...+.|.|
T Consensus 181 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 258 (1146)
T PRK08633 181 AGLVLLAVAVLGLIFA-YRLPKVPAAAPEVFDKKKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQL-AQANFPAY 258 (1146)
T ss_pred HHHHHHHHHHHHHHHH-hcCcCCCCCCcccccccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH-HHHhhHHH
Confidence 2222222222222222 333443221111 1112233344566778888877765555554444433 46677877
Q ss_pred cCCCCCcch----hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 275 SPNDEEIPH----GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 275 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
..+..+.+. +.+.+...++.+++.++.+++.||.++++
T Consensus 259 ~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~ 300 (1146)
T PRK08633 259 AKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELG 300 (1146)
T ss_pred HHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEcc
Confidence 766555443 45667778888999999999999998774
No 84
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.79 E-value=1.1e-16 Score=148.16 Aligned_cols=139 Identities=17% Similarity=0.150 Sum_probs=98.5
Q ss_pred HHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhh-hcchHHHHHHHHHHHHHH-HHHhcchHHH-HHHHHHHHH
Q 018113 59 YVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILSC-ITKHSPQYKI-LMIGRILGG 135 (360)
Q Consensus 59 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~-l~~~~~~~~~-l~~~r~l~G 135 (360)
...++.+++|.+.++.+++.+.......+..+++|+++|| +||||+++.+.++++++. +++++++... +.++|.++|
T Consensus 37 l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ 116 (489)
T PRK10207 37 LAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIA 116 (489)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Confidence 3666778899999999998888887788888899999999 999999999999999987 7777765444 558999999
Q ss_pred hHhhhhhhhhhhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhH
Q 018113 136 IATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAA 205 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~ 205 (360)
+|.|...+...+ ++.|. +++.+..+ ....+..+.++|. .++|.+++++.++.| |++.|++..
T Consensus 117 ig~g~~~~~~~~-li~~~~p~~~~~~~~-~~~~~~~~~nig~----~~g~~l~g~l~~~~g--w~~~F~i~~ 180 (489)
T PRK10207 117 VGNGLFKANPAS-LLSKCYPPKDPRLDG-AFTLFYMSINIGS----LISLSLAPVIADKFG--YSVTYNLCG 180 (489)
T ss_pred hccccccCCHHH-HHHHhcCCCchhhhc-chhHHHHHHHHHH----HHHHHHHHHHHHhhC--hHHHHHHHH
Confidence 999999888755 77775 21111111 2223444444444 444444455555445 556676653
No 85
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.79 E-value=1.9e-16 Score=146.53 Aligned_cols=276 Identities=18% Similarity=0.223 Sum_probs=178.5
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH--HH
Q 018113 41 NYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC--IT 118 (360)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~--l~ 118 (360)
.+.....+..+.+++....++.+..+..-|+..++.+.....+...+.++++|.++||++|||+++.+.++.++.. +.
T Consensus 14 ~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~ 93 (524)
T PF05977_consen 14 RLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLA 93 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHH
Confidence 3445666778888888666667777778889999999999999999999999999999999999999988776533 22
Q ss_pred --Hh--cchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccC
Q 018113 119 --KH--SPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (360)
Q Consensus 119 --~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~ 194 (360)
.. ..+.+.+++.-++.|++.+...|+..+ ++.|.-+|....+ ..+..+...++...+|+.+++. +....|
T Consensus 94 ~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A-~ip~lV~~~~L~~-A~al~s~~~niar~iGPalgG~----Lva~~G 167 (524)
T PF05977_consen 94 VLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQA-IIPELVPKEDLPA-ANALNSISFNIARIIGPALGGI----LVAFFG 167 (524)
T ss_pred HHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccHhhHHH-HHHHHHHHHHHHHhccchHHHH----HHHHHH
Confidence 22 247788899999999999999888866 8887632322221 2223343444444444444443 333222
Q ss_pred CCCchhhhhhHHHHHHHHHHHhhhhcccc-CCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhcc
Q 018113 195 LGPVAPFDAAACFLAIGMVIILSSWTENY-GDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPA 273 (360)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (360)
....|.+.+...++....+ ..++++. +++.++++..++.++..+.+.++|.+........++...... ....+|.
T Consensus 168 --~~~~f~inalsfl~~i~~l-~~~~~~~~~~~~~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a-~~aLlPl 243 (524)
T PF05977_consen 168 --AAAAFLINALSFLISILAL-LRWKPPPPPSSLPRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASA-VWALLPL 243 (524)
T ss_pred --HHHHHHHHHHHHHHHHHHH-HHccccccccccchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhH-HHHhhhH
Confidence 2345655554444433333 3333322 222233344566677777778888776554434433333222 3455788
Q ss_pred ccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHH
Q 018113 274 LSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLL 328 (360)
Q Consensus 274 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 328 (360)
+.++..+.++ |.+.+..++++++|+++.+++.+|+++++ .+..+....++++.
T Consensus 244 ~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~--lv~~~~~~~a~~~~ 299 (524)
T PF05977_consen 244 FARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRR--LVLLASLLFALALL 299 (524)
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcch--hhHHHHHHHHHHHH
Confidence 8777666555 67788889999999999999999988763 44444444444433
No 86
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.78 E-value=3.5e-16 Score=144.51 Aligned_cols=257 Identities=14% Similarity=0.081 Sum_probs=151.7
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
...++.+.+|+|-+ ....++.+...+...+..++.|+++|.||||..++.+.++..+|. .++-++|...++.+..+.|
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~G 142 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYG 142 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHH
Confidence 34478999999864 566788888888888999999999999999999999999999998 8899999999999999999
Q ss_pred hHhhhhhhhhhhHHhhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (360)
+|.|.... . ...++|. .+|.+.... .... .........++.++..+..+.+||| .|+...+...+..+.
T Consensus 143 vgaG~~~~-~-~~~isEl~p~k~R~~~~--~~~~----~~~i~~~~~~~~ia~~~~~~~~WRw--~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 143 VGAGVQEL-A-ALAISELVPNKWRGLGL--AIAS----IPFIITTWISPLIAQLFAAHSGWRW--IFYIFIIWSGIALVL 212 (599)
T ss_pred HhhHHHHH-H-HHHHHHhcccchhhhHh--HHHH----HHHHhhhcccHHHHHHhccCCCcch--HHHHHHHHHHHHHHH
Confidence 99777643 3 3257776 333332111 1111 1222222344555555444445665 455544444443333
Q ss_pred Hh-hhhccccCCC-CcchhHHHHHHH-H----------------------------------------------------
Q 018113 215 IL-SSWTENYGDP-SESKDLLTQFRG-A---------------------------------------------------- 239 (360)
Q Consensus 215 ~~-~~~~~~~~~~-~~~~~~~~~~~~-~---------------------------------------------------- 239 (360)
.. +..|+++++. .++....++.++ +
T Consensus 213 ~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~ 292 (599)
T PF06609_consen 213 IFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEW 292 (599)
T ss_pred HHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhh
Confidence 32 2223322111 111111111111 0
Q ss_pred ---------HHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcc------hhHHHHHHHHHHHHHHHHHHHH
Q 018113 240 ---------AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP------HGFIFATFMLASMLGSSLASRL 304 (360)
Q Consensus 240 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l 304 (360)
..+++|++|.+...+...+..+..+.....+.|......++.+ .+.......++..++..+.+.+
T Consensus 293 ~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l 372 (599)
T PF06609_consen 293 FGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLL 372 (599)
T ss_pred hccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHH
Confidence 0146777555444444433344333334455555433333222 2455566788888899999999
Q ss_pred HhhcCCChhhHHHHHHHHHHH
Q 018113 305 MARSPPRVESYMQIVFVVSSV 325 (360)
Q Consensus 305 ~dr~g~~~~~~~~~~~~~~~~ 325 (360)
..|++|-| ..+..+......
T Consensus 373 ~~~ir~~K-w~li~~~~~~ta 392 (599)
T PF06609_consen 373 FSKIRHIK-WQLIFGSVLMTA 392 (599)
T ss_pred HHHccchh-HHHHHHHHHHHH
Confidence 99987764 444444444433
No 87
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.78 E-value=7.1e-17 Score=151.14 Aligned_cols=245 Identities=18% Similarity=0.177 Sum_probs=151.5
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhh
Q 018113 73 EIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVA 151 (360)
Q Consensus 73 ~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~ 151 (360)
+.+++.+...++..+++++.|+++|++|||+.++.+.+++.++. ++++++|+.++.++|++.|+|.|...... +.+++
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~-piy~s 168 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLA-PVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcc-hhhHh
Confidence 44899999999999999999999999999999999999999988 88999999999999999999999997655 76999
Q ss_pred hc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhcccc-----
Q 018113 152 EH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENY----- 223 (360)
Q Consensus 152 ~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 223 (360)
|. +.||......+.....+.. ++..++..... ..++||..+.+..+..++..+. ....||++
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~----~~~~~~~~~~~-----~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~ 238 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGIL----LGYCINYGTSK-----VYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIE 238 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHH----HHHHHhhhhcc-----CCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHH
Confidence 97 5677755544444443333 33222222111 1156777776665555554444 24444432
Q ss_pred -CCCCcchhHHHHHHH----------------------------HHHHHhc--chh-HHHHHHHHHHHHhhHHHHHHhhh
Q 018113 224 -GDPSESKDLLTQFRG----------------------------AAVAIAS--DEK-IALLGAIQSLFEGSMYTFVFLWT 271 (360)
Q Consensus 224 -~~~~~~~~~~~~~~~----------------------------~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~ 271 (360)
++.+++++..++.+. .++++++ .++ .........+.+...+.....|.
T Consensus 239 ~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~ 318 (513)
T KOG0254|consen 239 KGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYS 318 (513)
T ss_pred cCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeeh
Confidence 222221111111110 0111222 111 22223333334444444445666
Q ss_pred ccccCCCCCcch-hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHh
Q 018113 272 PALSPNDEEIPH-GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLP 330 (360)
Q Consensus 272 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 330 (360)
+.+++.....+. ........+..+++..+...+.||+|||+ .++.+.....++..+.
T Consensus 319 ~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~--lll~s~~~m~~~~~~~ 376 (513)
T KOG0254|consen 319 TTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRK--LLLFGAAGMSICLVIL 376 (513)
T ss_pred HHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHH--HHHHhHHHHHHHHHHH
Confidence 666655443333 44445556778888888899999999994 5555555544444433
No 88
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.77 E-value=3.2e-16 Score=141.22 Aligned_cols=249 Identities=18% Similarity=0.229 Sum_probs=148.2
Q ss_pred HHhhC--CChhhhH----HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-H---HHhcchHHHHHHHHHH
Q 018113 64 YSTYG--FGKGEIG----QLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-I---TKHSPQYKILMIGRIL 133 (360)
Q Consensus 64 ~~~~g--~s~~~~g----~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l---~~~~~~~~~l~~~r~l 133 (360)
.+++| .++++.. .+.+...+++++++.+.|.++||+|||..+..+.++..++. + +...++++++.++|++
T Consensus 46 ~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i 125 (485)
T KOG0569|consen 46 IERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLI 125 (485)
T ss_pred HHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 35566 4444443 45667888999999999999999999999999988887754 2 3457899999999999
Q ss_pred HHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHH--hhhhhhhhcccCCCCchhhhhhHHHH
Q 018113 134 GGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILS--GLFGNLLVDSFSLGPVAPFDAAACFL 208 (360)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~--~~l~~~l~~~~~~~~~~~~~~~~~~~ 208 (360)
.|+..+...... ++++.|. +.||........ +..+|..+|..++ .+++. . -.|.+.+....+..
T Consensus 126 ~Gl~~gl~~~~~-pmyl~E~sP~~~RG~~g~~~~~----~~~~g~ll~~~~~l~~ilGt----~--~~W~~l~~~~~i~~ 194 (485)
T KOG0569|consen 126 VGLACGLSTGLV-PMYLTEISPKNLRGALGTLLQI----GVVIGILLGQVLGLPSLLGT----E--DLWPYLLAFPLIPA 194 (485)
T ss_pred HHHHhHHHHHHH-HHHHhhcChhhhccHHHHHHHH----HHHHHHHHHHHHccHHhcCC----C--cchHHHHHHHHHHH
Confidence 999998886665 7799997 678874443333 3334443333332 11222 1 23445555555555
Q ss_pred HHHHHHHhhhhccccC-------CCCcchhHHHHH-----------------H---------HHHHHHhcchhHHHH---
Q 018113 209 AIGMVIILSSWTENYG-------DPSESKDLLTQF-----------------R---------GAAVAIASDEKIALL--- 252 (360)
Q Consensus 209 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-----------------~---------~~~~~~~~~~~~~~~--- 252 (360)
++..... ++.||+++ +++++++..+.. + .+.+++++|+....-
T Consensus 195 ~~~l~~l-~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i 273 (485)
T KOG0569|consen 195 LLQLALL-PFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLI 273 (485)
T ss_pred HHHHHHH-hcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHH
Confidence 5544444 56666532 222222111100 0 024467776554432
Q ss_pred -HHHHHHHHhhHHHHHHhhhccccCCC-CCcch-hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHH
Q 018113 253 -GAIQSLFEGSMYTFVFLWTPALSPND-EEIPH-GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVS 326 (360)
Q Consensus 253 -~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 326 (360)
.......+.........|...++++. ...+. .......+....+.++++.++.||.|||+ .++.+.....+.
T Consensus 274 ~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRp--Lll~~~~~~~~~ 348 (485)
T KOG0569|consen 274 GIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRP--LLLISLSLMAVA 348 (485)
T ss_pred HHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcH--HHHHHHHHHHHH
Confidence 22222223333333344555444432 22222 35556667889999999999999999995 444444433333
No 89
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.77 E-value=4.1e-18 Score=145.57 Aligned_cols=232 Identities=20% Similarity=0.226 Sum_probs=167.7
Q ss_pred HHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhhhh
Q 018113 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLF 142 (360)
Q Consensus 64 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~ 142 (360)
.++.+-+++++|+++....+...+.+++.|.+.||+|+|..+++|...+..+. +.++.+++++++++|.+||+|.+...
T Consensus 98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ 177 (464)
T KOG3764|consen 98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFAD 177 (464)
T ss_pred ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHH
Confidence 34566778899999999999999999999999999999999999999999987 88999999999999999999999998
Q ss_pred hhhhhHHhhhc----cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHhhh
Q 018113 143 SAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSS 218 (360)
Q Consensus 143 ~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (360)
++..+ +++|. ++|++..+..-.+.+ +|.+++|.+++.+.+..| ...+|++.+.++++-..+....
T Consensus 178 tsgla-mlAd~f~~d~er~~vmGialgfis--------lG~lvgPpfGGilYe~~G--k~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 178 TSGLA-MLADVFPEDNERGSVMGIALGFIS--------LGVLVGPPFGGILYEFAG--KSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred hhhHH-HHHHHcccchhhhHHHHHHHHHHh--------ccceecCCcccchHhhcC--CcCcHHHHHHHHHHHHHHHHhe
Confidence 88877 76664 567775555444433 777888888888887655 4588999888887777766544
Q ss_pred hccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCc---chhHHHHHHHHHHH
Q 018113 219 WTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI---PHGFIFATFMLASM 295 (360)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 295 (360)
.++.+.++++.++ ..+..+++++|.++............ ..+..--++.++.+.... ..+..+....+...
T Consensus 247 i~p~~~~~~~~~~-----~~~~~~Ll~dP~I~~~agai~~~n~~-lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ 320 (464)
T KOG3764|consen 247 IEPTEMDPDSTEQ-----GTPMWSLLMDPYILLIAGAITFSNSS-LAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYA 320 (464)
T ss_pred eCccccCcccccc-----CccHHHHHhCchHhhhhcchhhccch-HHHhCcccHHHHHHhccCCCcceeeeecccccchh
Confidence 4433332221111 12344678888888765544433322 222222233333343332 22566666778899
Q ss_pred HHHHHHHHHHhhcCCCh
Q 018113 296 LGSSLASRLMARSPPRV 312 (360)
Q Consensus 296 ~~~~~~g~l~dr~g~~~ 312 (360)
++..+.|.+.||++..+
T Consensus 321 ig~~lfg~la~k~~~~~ 337 (464)
T KOG3764|consen 321 IGTNLFGKLADKYPHLR 337 (464)
T ss_pred ccCchHHHHHHhcCchh
Confidence 99999999999999543
No 90
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.75 E-value=1.4e-15 Score=129.09 Aligned_cols=261 Identities=16% Similarity=0.152 Sum_probs=179.8
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHh
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGI 136 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~ 136 (360)
+|.++++.+|+|+|.+..|.+.+...+...+.+++..+++.|+|.++.+..++++.+++.+.--..+.+.++.+-.+.|.
T Consensus 32 gPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~~~~L~~gt~l~G~ 111 (395)
T COG2807 32 GPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGGLPLLFLGTLLAGA 111 (395)
T ss_pred hhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 68899999999999999999999999999999999999999999999999999999998855333477888999999999
Q ss_pred HhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHh
Q 018113 137 ATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (360)
Q Consensus 137 ~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (360)
+.+..+... +..+.++-. +..+.....++.....|.++++.+...+.... .+|++...++.. ..++..+...
T Consensus 112 gIav~nVLL-PslIK~~Fp--k~~~~mtglYs~sl~~~aaLaa~lavpla~~~---~gW~~aL~~WAl--~allAl~~Wl 183 (395)
T COG2807 112 GIAVINVLL-PSLIKRDFP--KRVGLMTGLYSTSLGAGAALAAALAVPLAQHS---GGWRGALGFWAL--LALLALLIWL 183 (395)
T ss_pred hHHHHHHhh-hHHHHhhcc--cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh---ccHHHHHHHHHH--HHHHHHHHHh
Confidence 999887666 436665521 22344666777777777777777777776652 245554444443 3333333222
Q ss_pred hhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcc--hhHHHHHHHHHH
Q 018113 217 SSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP--HGFIFATFMLAS 294 (360)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 294 (360)
+...+++ ....+.+ ..+...++|+|..|.+.+...+.....|. ...|+|.+..|+.-.. .+...+...+..
T Consensus 184 Pq~~r~~-~~~~~~~-----~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~-~~~WLP~ili~~G~sa~~aG~llsl~~l~~ 256 (395)
T COG2807 184 PQALREQ-AASIATK-----LVSVRKVWRSPLAWQVTLFMGLQSLLYYI-VIGWLPAILIDRGLSAAEAGSLLSLMQLAQ 256 (395)
T ss_pred hhccccc-ccccccc-----cccccccccCchhHHHHHHHHhhHHHHHH-HHHHHHHHHHHcCCCHHHhhhHHHHHHHHH
Confidence 2211111 1111111 01123579999999988877776665555 7999999887653222 267788889999
Q ss_pred HHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHhHhc
Q 018113 295 MLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVT 333 (360)
Q Consensus 295 ~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 333 (360)
++.++..+.+.+|.+.++ ...........+..+-..+.
T Consensus 257 ~~~~ll~P~la~R~~n~r-~~~~~~~~~~l~G~~G~~~~ 294 (395)
T COG2807 257 LPTALLIPLLARRSKNQR-PLVVLALLLMLVGLVGLLLA 294 (395)
T ss_pred HHHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHHHh
Confidence 999999999999865544 34444444444444433333
No 91
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.74 E-value=4.5e-15 Score=134.58 Aligned_cols=245 Identities=15% Similarity=0.003 Sum_probs=140.8
Q ss_pred hhhhHHHHHHHHhhCCChhhhHHH--HHHHHHHHhhhhhhh-hhhhhhhcchHHHHHHHHHH-HHHH-HHH---hcch-H
Q 018113 54 WLQGPYVYYLYSTYGFGKGEIGQL--FIAGFGSSMLFGTIV-GSLADKQGRKRACVTYCLTY-ILSC-ITK---HSPQ-Y 124 (360)
Q Consensus 54 ~~~~~~~~~~~~~~g~s~~~~g~~--~~~~~~~~~~~~~~~-G~l~Dr~Grr~~l~~~~~~~-~~~~-l~~---~~~~-~ 124 (360)
++..|++|.+.+|.|.|.+++|.. .........+.+|+. ++..||+||||..++...+. +... ..+ ...+ .
T Consensus 18 ~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 97 (390)
T TIGR02718 18 GLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGA 97 (390)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhH
Confidence 334688999999999999999987 355677788888877 44799999999876665332 2112 222 2222 2
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhh
Q 018113 125 KILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAA 204 (360)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~ 204 (360)
..++....+.++..+...+.... +..|. .|++..+...... ..|..+|..+++.....+.+.. +|+.+|++.
T Consensus 98 ~~~~~~~~~~~~~~a~~d~~~d~-~~~~~-~~~~~~~~~~~~~----~~g~~lG~~~g~~~~~~l~~~~--gw~~~f~~~ 169 (390)
T TIGR02718 98 GWAVGLLACASLASATQDIATDG-MAAEH-FNGRTLAKGNAVQ----IAGVMIGFFGGGAGTLVLFGKF--GQRPAFLLV 169 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHh-CCHhhhhHHHHHH----HHHHHHHHHHHHHHHHHHHHHh--CHHHHHHHH
Confidence 23344444444555555444433 43443 1222222222223 3344456666666555655554 566778777
Q ss_pred HHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcchh
Q 018113 205 ACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHG 284 (360)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (360)
+.+.++..+.. ...+|++++++++++ +..++.++.+|+|+.+.......+....... ...+.+.|.+| .+.+..
T Consensus 170 a~l~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~l~~-~G~s~~ 243 (390)
T TIGR02718 170 ACVPLASLVCV-LWLKDRAVASPEAPL---ARRASLFRFFRRPLAWSLLALALLSAMTAVS-GFGLSKLYLVD-AGWPLE 243 (390)
T ss_pred HHHHHHHHHHH-HHcCCCCcCccccch---hhHHHHHHHHcCcCHHHHHHHHHHHHHHHHH-HHHHhhHHHHh-cCCCHH
Confidence 76665544444 223332221111111 1122455778888877665555554444434 35567777766 366553
Q ss_pred ---HHHHHHH-HHHHHHHHHHHHHHhhcCCCh
Q 018113 285 ---FIFATFM-LASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 285 ---~~~~~~~-~~~~~~~~~~g~l~dr~g~~~ 312 (360)
....... ...+++..+.|++.||+|+|+
T Consensus 244 ~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~ 275 (390)
T TIGR02718 244 WIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWR 275 (390)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 3334333 356677899999999999885
No 92
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.73 E-value=7.2e-16 Score=142.00 Aligned_cols=266 Identities=13% Similarity=0.158 Sum_probs=187.6
Q ss_pred ccchhHHHHHHHHHHHH-Hhhhh---hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHH
Q 018113 35 FNSFKNNYLLVYSLMMA-GDWLQ---GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (360)
Q Consensus 35 ~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 110 (360)
...+.|.+....++... .++.. +.+.+.++++++.+.++++++.++......+.+|+.+.+.||+|.|++.+.|.+
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~ 119 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGL 119 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHH
Confidence 45566777766655544 34544 455889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HHHhcchHHHHHH-HHHHHHhHhhhhhhhhhhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 018113 111 TYILSC-ITKHSPQYKILMI-GRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (360)
Q Consensus 111 ~~~~~~-l~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 186 (360)
+..++. +.+++++.+.+++ .-++.|+|.+..+..... ++..+ ++|+.. +.....|.++|..+-|.+.
T Consensus 120 v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiv-iv~~YF~kkR~lA--------~Gia~~GsG~G~~~~~~l~ 190 (509)
T KOG2504|consen 120 VAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVV-ILGTYFEKKRALA--------TGIAVSGTGVGTVVFPPLL 190 (509)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhh-hhhhHhHHHHHHH--------HhhhhccCCcceeeHHHHH
Confidence 999998 8899999987766 468999999999887744 77776 556552 2233457778889889999
Q ss_pred hhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhc---cc-------------------------cCCCCc--c------h
Q 018113 187 NLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWT---EN-------------------------YGDPSE--S------K 230 (360)
Q Consensus 187 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------------~~~~~~--~------~ 230 (360)
..+.+..||++ .+++...+.+-.........| +. ..++++ . +
T Consensus 191 ~~l~~~~G~r~--~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (509)
T KOG2504|consen 191 KYLLSKYGWRG--ALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNL 268 (509)
T ss_pred HHHHHHhCcHH--HHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccch
Confidence 99888877665 444443333322222222222 00 000000 0 0
Q ss_pred hH-------HH--HHHHH----HHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch--hHHHHHHHHHHH
Q 018113 231 DL-------LT--QFRGA----AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH--GFIFATFMLASM 295 (360)
Q Consensus 231 ~~-------~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 295 (360)
+. .+ ..+.. ..++++++.++.+.....+...+.+. ...++|.|.++....+. +...++.++..+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~-p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i 347 (509)
T KOG2504|consen 269 ATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNV-PFVYLPSYAKSLGLSSNDAAFLLSIIGVSDI 347 (509)
T ss_pred hhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHH-HHHHHHHHHhhcCCChhhhHHHHHHHHHhhh
Confidence 00 00 11111 24788999999888777777666666 57788888874432222 577888899999
Q ss_pred HHHHHHHHHHhhcCCCh
Q 018113 296 LGSSLASRLMARSPPRV 312 (360)
Q Consensus 296 ~~~~~~g~l~dr~g~~~ 312 (360)
+++++.|++.|+...++
T Consensus 348 ~gRi~~G~laD~~~~~~ 364 (509)
T KOG2504|consen 348 IGRIILGLLADKPGIRA 364 (509)
T ss_pred hhhhhhhhhcCccccch
Confidence 99999999999988554
No 93
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.72 E-value=7.5e-15 Score=135.94 Aligned_cols=142 Identities=16% Similarity=0.152 Sum_probs=103.7
Q ss_pred hHHHHHHHH-h--hCCChhhhHHHHHHHHHHHhhhhhhhhhhhhh-hcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHH
Q 018113 57 GPYVYYLYS-T--YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILSC-ITKHSPQYKILMIGR 131 (360)
Q Consensus 57 ~~~~~~~~~-~--~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r 131 (360)
.+++|.+.+ + +|++..+.|.+.+.......++++++|+++|| +|||+++.++.++.+++. +.+++++++.+.++|
T Consensus 30 ~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~ 109 (475)
T TIGR00924 30 QGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGL 109 (475)
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHH
Confidence 566665544 4 89999999999999999999999999999999 899999999999999987 777888888889999
Q ss_pred HHHHhHhhhhhhhhhhHHhhhc---cc---cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhH
Q 018113 132 ILGGIATSLLFSAFESWLVAEH---NK---RGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAA 205 (360)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~---~~---r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~ 205 (360)
.+.|++.|...+...+ +++|. ++ |+...+ ......+ +|..+++.+++.+.+..+ |+..|...+
T Consensus 110 ~l~g~g~g~~~~~~~~-~~a~~~~~~~~~~r~~~~~----~~~~~~n----iG~~ig~~l~g~l~~~~g--~~~~f~~~~ 178 (475)
T TIGR00924 110 GTIAVGSGLFKANPSS-MVGKLYERGDMPRRDGGFT----LFYMSIN----IGSFISPLLAGVIAENYG--YHVGFNLAA 178 (475)
T ss_pred HHHHhccccccCCHHH-HHHHhcCCCCcccccceeh----hHHHHHH----HHHHHHHHHHHHHHHhcC--hHHHHHHHH
Confidence 9999999988777745 76664 11 333222 2222333 455555555555555444 556666655
Q ss_pred HHHH
Q 018113 206 CFLA 209 (360)
Q Consensus 206 ~~~~ 209 (360)
...+
T Consensus 179 ~~~~ 182 (475)
T TIGR00924 179 VGMV 182 (475)
T ss_pred HHHH
Confidence 4333
No 94
>PRK09669 putative symporter YagG; Provisional
Probab=99.70 E-value=2.1e-14 Score=132.38 Aligned_cols=247 Identities=13% Similarity=0.160 Sum_probs=139.8
Q ss_pred hHH-HHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhh----hcch-HHHHHHHHHHHHHH-HHHhcch------
Q 018113 57 GPY-VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK----QGRK-RACVTYCLTYILSC-ITKHSPQ------ 123 (360)
Q Consensus 57 ~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr----~Grr-~~l~~~~~~~~~~~-l~~~~~~------ 123 (360)
..+ .+++.+++|+|+.++|.++.+..+...+..|+.|.++|| +||| +.++.+....+++. +....++
T Consensus 29 ~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~ 108 (444)
T PRK09669 29 MLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGK 108 (444)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchH
Confidence 344 556667899999999999999999999999999999998 7875 44556666666655 3333332
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhHHhhhc----cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-ccCCCCc
Q 018113 124 YKILMIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD-SFSLGPV 198 (360)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~-~~~~~~~ 198 (360)
...+++..++.+.+.........+ +.+|. ++|.+..+....... +|..+++.+...+...+.+ ....+|+
T Consensus 109 ~~~~~~~~~l~~~~~t~~~ip~~a-l~~~~t~~~~eR~~l~~~r~~~~~----~G~~i~~~~~~pl~~~~~~~~~~~g~~ 183 (444)
T PRK09669 109 IIYACVTYILLSLVYTAINVPYCA-MPGAITNDPRERHSLQSWRFALSF----IGGLIVSVIALPLVDILGKGDEQKGYF 183 (444)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHH-hHHHhcCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhCCCchhhhHH
Confidence 345555566666655555444433 55553 556554443333333 3333443433333322211 1123455
Q ss_pred hhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCC
Q 018113 199 APFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND 278 (360)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (360)
..+.+.+++..+..+......+|++.++++++ .+..+..++++|||+++.......+....... .....+.|.+..
T Consensus 184 ~~~~i~~ii~~v~~~~~~~~~~e~~~~~~~~~---~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~-~~~~~~y~~~~~ 259 (444)
T PRK09669 184 YAMMVMGLLGVVLFFCCFFMTKERYTPEVDNS---SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVT-RGGATLYYVNYV 259 (444)
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEecCCCCcCC---CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHH-Hhhhhheeeeee
Confidence 55555555555444444333344322221111 22344566788999988765554443332221 222233333333
Q ss_pred CCcch--hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 279 EEIPH--GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 279 ~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
.+.+. +.......+..+++.++.+++.||+|+|+
T Consensus 260 ~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~ 295 (444)
T PRK09669 260 LLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVR 295 (444)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 32222 23444445677788899999999999885
No 95
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.70 E-value=8.3e-16 Score=140.99 Aligned_cols=266 Identities=17% Similarity=0.179 Sum_probs=163.6
Q ss_pred HHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhh----hhcchHHHH-HHHHHHHHHH-HHHhc-c-------hHH
Q 018113 60 VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD----KQGRKRACV-TYCLTYILSC-ITKHS-P-------QYK 125 (360)
Q Consensus 60 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~D----r~Grr~~l~-~~~~~~~~~~-l~~~~-~-------~~~ 125 (360)
.+.+.+..|+++..+|.+....-+...+..|+.|.++| |+||||..+ .+....+++. ++... | ...
T Consensus 25 ~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~ 104 (428)
T PF13347_consen 25 LYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLV 104 (428)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHH
Confidence 55666778999999999999999999999999999999 899766555 5667777766 44433 3 223
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhHHhhhc----cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccC-CCCchh
Q 018113 126 ILMIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS-LGPVAP 200 (360)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~-~~~~~~ 200 (360)
.+.+..++..++.........+ +..|. ++|.+..+...... .+|..+...+.+.+...+.+... .+|+..
T Consensus 105 ~~~~~~~l~~~~~t~~~i~~~a-l~~~lt~~~~~R~~l~~~~~~~~----~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~ 179 (428)
T PF13347_consen 105 WLFVFYILFDIAYTFVQIPYNA-LIPELTPDPDERTRLSSWRMIFS----MIGSLLASFLAPILVSWFGGGDTSNGYRWM 179 (428)
T ss_pred HHHHHHHHHHHhhhhccCchhh-cCccccccHhhhhhHHHHHHHHH----HHHHHHHHHHhhhhhhhhccCccchHHHHH
Confidence 3456666667777776555544 55553 56666444433333 33333333344433333222111 145566
Q ss_pred hhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCC
Q 018113 201 FDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE 280 (360)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (360)
..+.+++..+.........+|++++. ++++...+.++..++++|||++..+.....+....... .....+.|.++..+
T Consensus 180 ~~v~~iv~~v~~~i~~~~~ke~~~~~-~~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~-~~~~~~y~~~~vl~ 257 (428)
T PF13347_consen 180 ALVLAIVGLVFFLITFFFVKERSVEV-TEQEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFAL-MNTFLPYYFTYVLG 257 (428)
T ss_pred HHHHHHHHHHHhhhhhheeeeccccc-cccccccccccchhhhcccchHHHHHHHHHHHHhhhhh-hhhHHHHHHHHHhc
Confidence 66666666666665545556622222 22222334555677889999988776666554443333 34444545444333
Q ss_pred cch--hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHhHhcc
Q 018113 281 IPH--GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTI 334 (360)
Q Consensus 281 ~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (360)
.+. +.......+..+++.++.++++||+|+|+ ....+..+..+......+..
T Consensus 258 ~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~--~~~~~~~~~~~~~~~~~~~~ 311 (428)
T PF13347_consen 258 NEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKK--VYIIGLLLAALGFLLLFFLG 311 (428)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHcccee--ehhhhHHHHHHHHHHHHHHH
Confidence 332 45566778889999999999999999994 55555555555555544443
No 96
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.70 E-value=6.4e-14 Score=127.73 Aligned_cols=280 Identities=17% Similarity=0.117 Sum_probs=158.3
Q ss_pred HHHhhhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhh----hhcchHHHHHHHHH-HHHHH-HHHhcch
Q 018113 50 MAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD----KQGRKRACVTYCLT-YILSC-ITKHSPQ 123 (360)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~D----r~Grr~~l~~~~~~-~~~~~-l~~~~~~ 123 (360)
++....+.++++.+.+++|.++.+.+.+.....+.+.+.+++.|.++| |+||||.++.+... ..++. +.+++++
T Consensus 17 q~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~ 96 (477)
T TIGR01301 17 QFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAAD 96 (477)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCch
Confidence 444455578877888999999999999999999999999999999999 59999998886444 44455 5566655
Q ss_pred HH-----------------HHHHHHHHHHhHhhhhhhhhhhHHhhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 018113 124 YK-----------------ILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (360)
Q Consensus 124 ~~-----------------~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 185 (360)
.. ..+++-.+..++.....+...+ +++|. .++.+..+......+....+|+.+|..++...
T Consensus 97 ~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rA-LiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~ 175 (477)
T TIGR01301 97 IGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRA-FLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYS 175 (477)
T ss_pred hhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 42 2233333444566666676645 88886 21111111122233333344444444444332
Q ss_pred h--h---hh----hcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCcc--------h-h--HHHHHHHHHHHHhc
Q 018113 186 G--N---LL----VDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSES--------K-D--LLTQFRGAAVAIAS 245 (360)
Q Consensus 186 ~--~---~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~--~~~~~~~~~~~~~~ 245 (360)
. . .. .+....+.+..|.+.+++.++...+.....+|++..+++. + + ..+..++-++.+.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 255 (477)
T TIGR01301 176 GLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAFFGELFGAFKY 255 (477)
T ss_pred hHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhhHHHHHHHHHH
Confidence 1 0 00 0111224567788877777777776656666654311110 0 0 01111222222333
Q ss_pred c-hhHHHHHHHHHHHHhhHHHHHHhhhccccC-CCCCc--------chh-----HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 018113 246 D-EKIALLGAIQSLFEGSMYTFVFLWTPALSP-NDEEI--------PHG-----FIFATFMLASMLGSSLASRLMARSPP 310 (360)
Q Consensus 246 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~-----~~~~~~~~~~~~~~~~~g~l~dr~g~ 310 (360)
- +..+.++....+...+.+.+ ..|...|.. +.++. +.+ .....+.+...+.+++..++.+|+|+
T Consensus 256 mP~~m~~l~~vqffsW~a~f~~-~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~ 334 (477)
T TIGR01301 256 LPRPVWILLLVTCLNWIAWFPF-ILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGA 334 (477)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-HHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2 44556666777766666664 444444432 22221 112 23344455566777888999999986
Q ss_pred ChhhHHHHHHHHHHHHHHHhHh
Q 018113 311 RVESYMQIVFVVSSVSLLLPIV 332 (360)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~ 332 (360)
|+ +....+..+.++++....+
T Consensus 335 ~k-~~~~~s~~~~~~~l~~~~~ 355 (477)
T TIGR01301 335 GK-RLWGIVNIILAICLAATVL 355 (477)
T ss_pred ch-hHHHHHHHHHHHHHHHHHH
Confidence 43 4445665566655555543
No 97
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.70 E-value=3.3e-14 Score=127.87 Aligned_cols=272 Identities=17% Similarity=0.141 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhc-chHHHHHHHHHHHHHH-H
Q 018113 40 NNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG-RKRACVTYCLTYILSC-I 117 (360)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~G-rr~~l~~~~~~~~~~~-l 117 (360)
.++-...++..+..+...|+.+...++.|+|..|+|.+.+...+...+.++++|.++||.+ +||.+.+..+..++.. .
T Consensus 5 ~rLs~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~ 84 (400)
T PF03825_consen 5 FRLSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLL 84 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHH
Confidence 3444455566666677789999999999999999999999999999999999999999986 5777777767666655 5
Q ss_pred HHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc-cccchhhHHHHHHHHHHHHHHHHHHHHH-HhhhhhhhhcccCC
Q 018113 118 TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAIL-SGLFGNLLVDSFSL 195 (360)
Q Consensus 118 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~-~~~l~~~l~~~~~~ 195 (360)
....++++.++..-++..+......|...+ +.-+. ++++..-+..+..-++ |..++... +..+.+. .++
T Consensus 85 ~~~~~~f~~~~~~~~l~~~~~~p~~pl~ds-i~~~~~~~~~~~YG~iRlwGSi----Gf~~~~~~~~~~~~~~----~~~ 155 (400)
T PF03825_consen 85 LAFSSSFWWLFVIMLLFSFFFSPTMPLSDS-IALSYLGDRGKDYGRIRLWGSI----GFIVAALAFGGLLGGY----LGI 155 (400)
T ss_pred HHHhccHHHHHHHHHHHHHHHccHHHHHHH-HHHHHcccccCCCCcchhhhhH----HHHHHHHHHHHHHHhh----hcc
Confidence 566788888888777777777766666655 43333 3332322223323332 33222221 1112221 122
Q ss_pred C-CchhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccc
Q 018113 196 G-PVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (360)
Q Consensus 196 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (360)
+ ....+++.+....+..... ...|+.+++++++++..++...+..+++|||++..+.+...+.+..... ...+.+.|
T Consensus 156 ~~~~~~~~i~~~~~~ll~~~~-l~lp~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~-~~~f~~~y 233 (400)
T PF03825_consen 156 SGTSLIFYIAAILSLLLAGFA-LFLPKTPPKRSAKESVKKLLGLDALKLLKNPRFLVFLLAAFLIGISHAA-YYTFFSIY 233 (400)
T ss_pred ccccHHHHHHHHHHHHHHHHH-HhCCCCccccccCCCcccccchHHHHHhcCccHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 2 1223444433332222222 2334433222222121222222334789999988876665555443333 46777888
Q ss_pred cCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHH
Q 018113 275 SPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSS 324 (360)
Q Consensus 275 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 324 (360)
+++..+.+. +...++..+.+++.-...+++.+|+|.|+ .+.++.....
T Consensus 234 l~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~--ll~~a~~~~~ 284 (400)
T PF03825_consen 234 LQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKW--LLLLALVAYA 284 (400)
T ss_pred HHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH--HHHHHHHHHH
Confidence 877654322 45566777889999999999999999883 4444444333
No 98
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.68 E-value=8.4e-15 Score=137.81 Aligned_cols=255 Identities=15% Similarity=0.089 Sum_probs=157.1
Q ss_pred HHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhhhh
Q 018113 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLF 142 (360)
Q Consensus 64 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~ 142 (360)
.+.++.+........+..+++..+++.++|+++||+|||++++.+.++..++. ..++++|++.+++.|++.|++.+...
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence 46677778888888899999888999999999999999999999999999966 88999999999999999999999998
Q ss_pred hhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHh---
Q 018113 143 SAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL--- 216 (360)
Q Consensus 143 ~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 216 (360)
..... ++.|. ++|+..... .. ....++.+.+..++++.+ +||+.+++......+..+...
T Consensus 190 ~~~~~-~~~E~~~~~~R~~~~~~-~~--------~~~~~~~~~~~~~a~~~~----~Wr~~~~~~~~~~~~~~~~~~l~~ 255 (521)
T KOG0255|consen 190 TVGFG-LVAEIVSPKQRGLALTL-GG--------FFFVGGLMLPAGAAYITR----DWRWLFWIISIPSGLFLLLWFLPP 255 (521)
T ss_pred HHhHh-hheeecCcchhhHHHHH-HH--------HHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHccC
Confidence 88744 88887 666663333 11 112344555555555553 455666665555444433321
Q ss_pred --hhhccccCCCCcchhHHHHHH-------------------H-----------HHHHHhcchhHHHHHHHHHHHHhhHH
Q 018113 217 --SSWTENYGDPSESKDLLTQFR-------------------G-----------AAVAIASDEKIALLGAIQSLFEGSMY 264 (360)
Q Consensus 217 --~~~~~~~~~~~~~~~~~~~~~-------------------~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (360)
+++...+++.+++++..++.. . ...++++.|+.........+.. ..+
T Consensus 256 Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~-~~~ 334 (521)
T KOG0255|consen 256 ESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIW-FVF 334 (521)
T ss_pred cChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHH-HHH
Confidence 222222333222222111110 0 0123444444333322222222 111
Q ss_pred HHHHhhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHhHhccCC
Q 018113 265 TFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTIPG 336 (360)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (360)
. ...+.-.+.....+.+...................+...||.||| ...........++++...+....
T Consensus 335 ~-~~y~gl~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~--~~~~~~~~~~~~~~~~~~~~~~~ 403 (521)
T KOG0255|consen 335 S-LVYYGLSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRR--PPLFLSLFLAGIGLLLFGWLPDD 403 (521)
T ss_pred h-HHHHhhhhhhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHhhcc
Confidence 1 122223333444555566666666667888888889999999888 45555555555555555555433
No 99
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.67 E-value=8.1e-17 Score=140.18 Aligned_cols=186 Identities=16% Similarity=0.102 Sum_probs=132.1
Q ss_pred cchhHHHHHHHHHHHHHhhhh----hHHHHHHHHhh-C-------CChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchH
Q 018113 36 NSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTY-G-------FGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKR 103 (360)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-g-------~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~ 103 (360)
.+++...+.+.....+.|++| +...|.+...| | +++...+.+..+..++...+++++|++.||+|||+
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~ 115 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKK 115 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Confidence 344556666777788889888 23333333322 2 44556678888889989999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHhcc-------hHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHH
Q 018113 104 ACVTYCLTYILSC-ITKHSP-------QYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIF 172 (360)
Q Consensus 104 ~l~~~~~~~~~~~-l~~~~~-------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~ 172 (360)
++...++++.+++ +++++. -..++...|++.|+|.|+-+|.. +++.+|. ++||...+...+.++.+..
T Consensus 116 vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlS-AtI~SE~an~~~RGa~iaavFa~Qg~Gil 194 (538)
T KOG0252|consen 116 VYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLS-ATIMSESANKKTRGAFIAAVFAMQGFGIL 194 (538)
T ss_pred hhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcch-HHHhhhhhhhccccceeEEEEEecchhHh
Confidence 9999999998877 555531 13577889999999999999998 4488887 7788888877778887777
Q ss_pred HHHHHHHHHHhhhhhhhhc-----ccCCCCchhhhhhHHHHHHHHHHHhhhhcccc
Q 018113 173 LGNGLVAILSGLFGNLLVD-----SFSLGPVAPFDAAACFLAIGMVIILSSWTENY 223 (360)
Q Consensus 173 ~g~~~g~~~~~~l~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (360)
.|..++.++...+-..+-+ +.+.-||..+.+.++..+...... ...||++
T Consensus 195 aG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~R-l~M~Et~ 249 (538)
T KOG0252|consen 195 AGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFR-LKMPETA 249 (538)
T ss_pred hccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhh-hcCCcch
Confidence 7776666665554433322 122337888877777666655555 4455543
No 100
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.66 E-value=3.7e-13 Score=125.41 Aligned_cols=142 Identities=16% Similarity=0.137 Sum_probs=96.6
Q ss_pred hHH-HHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhh-hcchHHHHHHHHHHHHHH-HHHhcc-hHHHHHHHHH
Q 018113 57 GPY-VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILSC-ITKHSP-QYKILMIGRI 132 (360)
Q Consensus 57 ~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~-l~~~~~-~~~~l~~~r~ 132 (360)
.++ ..++.+++|+++++.+...+..........+++|+++|| +|||+++..+.++.+++. ++++++ +.+.+.++|+
T Consensus 41 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~ 120 (500)
T PRK09584 41 QGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMA 120 (500)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 344 455568999999998887777655555555689999999 599999999999998887 666754 5566778899
Q ss_pred HHHhHhhhhhhhhhhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHH
Q 018113 133 LGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAAC 206 (360)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 206 (360)
++|++.|...+...+ ++.|. +++.+..+. ...+. .+..+|..++|.+++++.++.+ |+..|.+..+
T Consensus 121 l~gig~g~~~~~~~~-l~~~~f~~~~~~~~~~-~~~~~----~~~~iG~~~gp~i~g~l~~~~g--~~~~F~i~~i 188 (500)
T PRK09584 121 TIAVGNGLFKANPSS-LLSTCYEKDDPRLDGA-FTMYY----MSINIGSFFSMLATPWLAAKYG--WSVAFALSVV 188 (500)
T ss_pred HHHHhhhcccCCHHH-HHHHhcCCCchhhhhc-chHHH----HHHHHHHHHHHHHHHHHHHhhC--HHHHHHHHHH
Confidence 999999988776644 77775 222221111 11222 2334666667777777666544 5566766554
No 101
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.65 E-value=8.6e-14 Score=129.21 Aligned_cols=252 Identities=15% Similarity=0.155 Sum_probs=138.7
Q ss_pred hhhhHHH-HHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhh----hhcc-hHHHHHHHHHHHHHH-HHHhcch---
Q 018113 54 WLQGPYV-YYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD----KQGR-KRACVTYCLTYILSC-ITKHSPQ--- 123 (360)
Q Consensus 54 ~~~~~~~-~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~D----r~Gr-r~~l~~~~~~~~~~~-l~~~~~~--- 123 (360)
....+++ .++.+.+|+++.++|.++...-+...+..|+.|.++| |+|| |+.++.+....+++. +....++
T Consensus 23 ~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~ 102 (473)
T PRK10429 23 GIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEG 102 (473)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCc
Confidence 3335664 4445567999999999999999999999999999999 6698 556666777767765 3333221
Q ss_pred ---HHHHHHHHHHHHhHhhhhhhhhhhHHhhh----ccccchhhHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhhccc-C
Q 018113 124 ---YKILMIGRILGGIATSLLFSAFESWLVAE----HNKRGFEQQWLSITFSKAIFLGNGLVAILS-GLFGNLLVDSF-S 194 (360)
Q Consensus 124 ---~~~l~~~r~l~G~~~~~~~~~~~~~~i~~----~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~-~~l~~~l~~~~-~ 194 (360)
+..+++..++.+++.........+ +..| .++|.+..+......+ +|..+.+.+. +.+ ...-+.. .
T Consensus 103 ~~~~~~~~~~~~l~~~~~t~~~ip~~a-l~~~lt~~~~eR~~l~~~~~~~~~----ig~~~~~~~~~~~~-~~~g~~~~~ 176 (473)
T PRK10429 103 TAQYVFVCVTYILWGMTYTIMDIPFWS-LVPTLTLDKREREQLVPYPRFFAS----LAGFVTAGFTLPFV-NYVGGGDRG 176 (473)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcchHHh-hhHHhCCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH-HHhCCCchh
Confidence 234445555666666655444433 4444 3667664444333322 2222222222 222 1111000 0
Q ss_pred CCCchhhhhhHHHHHHHHHHHhhhhccccCCCC--cchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhc
Q 018113 195 LGPVAPFDAAACFLAIGMVIILSSWTENYGDPS--ESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTP 272 (360)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (360)
-+|+....+.+++..+..+......+|+..+++ ++++...+.++..+.+++||+++.+.....+....... ...+.+
T Consensus 177 ~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~-~~~~~~ 255 (473)
T PRK10429 177 FGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNI-INGFAI 255 (473)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-Hhhhee
Confidence 123333344444444434343333444421111 11111123445556678998887766555554433333 344555
Q ss_pred cccCCCCCcch--hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 273 ALSPNDEEIPH--GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 273 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
.|.+...+.+. +.......+..+++.++.+++.||+|+|+
T Consensus 256 y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~ 297 (473)
T PRK10429 256 YYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRI 297 (473)
T ss_pred eEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 55444333222 34445556788889999999999999985
No 102
>PRK09848 glucuronide transporter; Provisional
Probab=99.65 E-value=2.5e-13 Score=125.41 Aligned_cols=261 Identities=12% Similarity=0.014 Sum_probs=143.2
Q ss_pred hhHH-HHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhh----cchHHH-HHHHHHHHHHH-HH-Hh----cch
Q 018113 56 QGPY-VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ----GRKRAC-VTYCLTYILSC-IT-KH----SPQ 123 (360)
Q Consensus 56 ~~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~----Grr~~l-~~~~~~~~~~~-l~-~~----~~~ 123 (360)
..++ .+++.++.|+++.++|.+.+...+...+..++.|+++||. ||||.. ..+.+...+.. +. .. .++
T Consensus 27 ~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (448)
T PRK09848 27 GALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHS 106 (448)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcc
Confidence 3455 4556667899999999999999999999999999999986 777755 55555454433 22 11 111
Q ss_pred --HHHHHHHHHHHHhHhhhhhhhhhhHHhhh----ccccchhhHHHHHHHHH-HHHHHHHHHHHHHhhhhhhhhcccCCC
Q 018113 124 --YKILMIGRILGGIATSLLFSAFESWLVAE----HNKRGFEQQWLSITFSK-AIFLGNGLVAILSGLFGNLLVDSFSLG 196 (360)
Q Consensus 124 --~~~l~~~r~l~G~~~~~~~~~~~~~~i~~----~~~r~~~~~~~~~~~~~-~~~~g~~~g~~~~~~l~~~l~~~~~~~ 196 (360)
.........+.+++.+...+...+ +..| .++|...........+. +...+..+++.+++..++.. ..+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~a-l~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~----~~~ 181 (448)
T PRK09848 107 SKVVYAYLTYMGLGLCYSLVNIPYGS-LATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEM----VSV 181 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccHhh-hhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch----hhh
Confidence 223344456667777766655434 3332 35565543333222121 22233333443333222110 011
Q ss_pred CchhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccC
Q 018113 197 PVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSP 276 (360)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (360)
+.....+..++..+..++.....+|+.++++++ ++..+..++++|||++........+....... .....|.|.+
T Consensus 182 ~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~----~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~ 256 (448)
T PRK09848 182 YHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQ----PSLKISLQTLKRNRPLFMLCIGALCVLISTFA-VSASSLFYVR 256 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEeccCCCccC----CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHH-HhhhheeeEe
Confidence 111111222222222223323344443222221 12344566789999998876666665554444 4556777777
Q ss_pred CCCCcchh--HH-HHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHH
Q 018113 277 NDEEIPHG--FI-FATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLL 328 (360)
Q Consensus 277 ~~~~~~~~--~~-~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 328 (360)
+..+.+.. .. .....++.+++.++.+++.||+|+|+ .+..+..+..+...
T Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~--~~~~g~~~~~i~~~ 309 (448)
T PRK09848 257 YVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKN--TFLIGALLGTCGYL 309 (448)
T ss_pred eecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH--HHHHHHHHHHHHHH
Confidence 76665542 22 22234567788999999999999884 44444444444333
No 103
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.63 E-value=8.3e-14 Score=118.24 Aligned_cols=156 Identities=17% Similarity=0.158 Sum_probs=114.5
Q ss_pred ccchhHHHHHHHHHHHHHhhhhh----HHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHH
Q 018113 35 FNSFKNNYLLVYSLMMAGDWLQG----PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (360)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~ 110 (360)
+.|.+|..........+.+.+.. -..|...+..|.+..|..++....+.+..+++..+|..+|++|||+.+....+
T Consensus 72 fgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l 151 (528)
T KOG0253|consen 72 FGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFL 151 (528)
T ss_pred cccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHH
Confidence 46778877777766666665552 33677778899888899999999999889999999999999999999999988
Q ss_pred HHHH-HHHHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 018113 111 TYIL-SCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (360)
Q Consensus 111 ~~~~-~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 186 (360)
...+ +.+.+.++|+..+++.|.+.|+|.|+ .|.... +-.|. .+|+...-.. .. ..+|.+....++
T Consensus 152 ~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~-~yle~lp~~~r~~~~V~~-~~--------waig~v~ea~la 220 (528)
T KOG0253|consen 152 VTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSA-IYLEFLPSSHRWLLTVMS-FF--------WAIGQVFEALLA 220 (528)
T ss_pred HHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHH-HHHHhccCcCCCcchhHH-HH--------HHHHHHHHHHHH
Confidence 8888 44889999999999999999999999 576645 44443 4444421111 22 224455555555
Q ss_pred hhhhcccCCCCchhh
Q 018113 187 NLLVDSFSLGPVAPF 201 (360)
Q Consensus 187 ~~l~~~~~~~~~~~~ 201 (360)
-..+...||||++.+
T Consensus 221 w~vm~~~gwr~~l~~ 235 (528)
T KOG0253|consen 221 WGVMSNFGWRYLLFT 235 (528)
T ss_pred HHHHHhhhHHHHHHH
Confidence 555555678876544
No 104
>PTZ00207 hypothetical protein; Provisional
Probab=99.63 E-value=6.1e-14 Score=130.53 Aligned_cols=130 Identities=11% Similarity=0.014 Sum_probs=98.4
Q ss_pred chhHHHHHHHHHHHHHhhhh---hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHH
Q 018113 37 SFKNNYLLVYSLMMAGDWLQ---GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYI 113 (360)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~ 113 (360)
.++|..+..........+.. +.+.|.+.+++|+|.++++.+.+.+... ...+++.|++.||+|||+++.++.++.+
T Consensus 24 ~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~-g~~~lp~G~L~Dr~G~R~vllig~ll~~ 102 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIAV-GYFLLPYSFIYDYLGPRPIFVLSMTVFC 102 (591)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 45566665555555544443 4558899999999999999988775543 3566689999999999999999999999
Q ss_pred HHH-HHHhc------chHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc--cccchhhHHHHHHHH
Q 018113 114 LSC-ITKHS------PQYKILMIGRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFS 168 (360)
Q Consensus 114 ~~~-l~~~~------~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~ 168 (360)
++. +++++ ++++.+.+.|++.|+|.+...+.... .+.++ ++||...+......+
T Consensus 103 iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~-~i~~~Fp~~RG~a~Gi~~~~~g 165 (591)
T PTZ00207 103 LGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVV-TVLSVFPSNRGAVVAIMKTFTG 165 (591)
T ss_pred HHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhChhhhHHHHHHHHHHHH
Confidence 987 66665 68999999999999999888777755 55655 677775555444433
No 105
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.63 E-value=6.5e-13 Score=118.89 Aligned_cols=271 Identities=16% Similarity=0.164 Sum_probs=169.8
Q ss_pred hhHHHHH-HHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhh----hhcchH-HHHHHHHHHHHHH-HHHhcch-----
Q 018113 56 QGPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD----KQGRKR-ACVTYCLTYILSC-ITKHSPQ----- 123 (360)
Q Consensus 56 ~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~D----r~Grr~-~l~~~~~~~~~~~-l~~~~~~----- 123 (360)
...++.. +.+..|+++..+|.++.+.-+.-++..|+.|.++| |+||+| .++.+.+..++.+ ++..+++
T Consensus 31 ~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~ 110 (467)
T COG2211 31 VVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTG 110 (467)
T ss_pred HHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCc
Confidence 3455444 44568999999999999999999999999999999 478754 5566667777755 5555552
Q ss_pred -HHHHHHHHHHHHhHhhhhhhhhhhHHhhh----ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-cCCCC
Q 018113 124 -YKILMIGRILGGIATSLLFSAFESWLVAE----HNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS-FSLGP 197 (360)
Q Consensus 124 -~~~l~~~r~l~G~~~~~~~~~~~~~~i~~----~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~-~~~~~ 197 (360)
....++.-.+.+++.......-.+ +.+| .+||.+..++.+...+.+.. +...+.+++.....+. ..++|
T Consensus 111 k~~ya~vtY~l~~l~YT~vniPy~a-l~~~iT~d~~ER~~l~s~R~~~~~~g~~----l~~~~~~plv~~~g~~~~~~g~ 185 (467)
T COG2211 111 KLIYALVTYMLLGLGYTLVNIPYGA-LGPEITQDPQERASLTSWRMVFASLGGL----LVAVLFPPLVKLFGGGDKALGY 185 (467)
T ss_pred chHHHHHHHHHHHHHHHheeCchhh-cchhhcCCHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhCCCcchhhH
Confidence 345566677778777766444333 4333 48888877766666554433 3333333333333222 24566
Q ss_pred chhhhhhHHHHHHHHHHHhhhhccccCCCCcchh-HHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccC
Q 018113 198 VAPFDAAACFLAIGMVIILSSWTENYGDPSESKD-LLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSP 276 (360)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (360)
+....+.+++..+..++.....+|+..+.++.++ ..++.++....+++||++........+. .............|.+
T Consensus 186 ~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~-~~~~~i~~s~~~yy~~ 264 (467)
T COG2211 186 QGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLL-FIAFNIRGSIMVYYVT 264 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHHHHccchHHHHHHHHHHH-HHHHHHHhhhhheeEE
Confidence 6665666666666666665555555433332222 3444555566788999998877644443 3333334555555555
Q ss_pred CCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHhHhcc
Q 018113 277 NDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTI 334 (360)
Q Consensus 277 ~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (360)
...+.+. .........+.+++.+...++.+|+|+| +....+..+..+......+.+
T Consensus 265 y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk--~~~~~~~~~~~i~~~~~~f~~ 323 (467)
T COG2211 265 YVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK--KLFLIGLLLLAVGYLLLYFTP 323 (467)
T ss_pred EEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH--HHHHHHHHHHHHHHHHHHhhc
Confidence 5444443 3455556666777799999999999999 456666666666666555554
No 106
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.61 E-value=2e-13 Score=120.88 Aligned_cols=270 Identities=15% Similarity=0.114 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHh-hCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHH--HH
Q 018113 40 NNYLLVYSLMMAGDWLQGPYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL--SC 116 (360)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~--~~ 116 (360)
|..-...+...+.-+...|+.|...++ .|+|.+|+|.++++..+...+.+|+.|.++||.|.||-++.......+ +.
T Consensus 10 ~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~p 89 (412)
T PF01306_consen 10 WWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGP 89 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHH
Confidence 344444444455555567887776664 899999999999999999999999999999999977765554433322 22
Q ss_pred --HHHhc----chHH-HHHHHHHHHHhHhhhhhhhhhhHHhhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 018113 117 --ITKHS----PQYK-ILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL 188 (360)
Q Consensus 117 --l~~~~----~~~~-~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (360)
...+. .|.+ ..+++-+..|+......|...+ ++.+. ++.+..-+..+..- .+|.+++..+ ++.
T Consensus 90 ff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea-~~er~sr~~~feYG~~R~wG----Sig~ai~s~~----~G~ 160 (412)
T PF01306_consen 90 FFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEA-YAERVSRRNGFEYGRARMWG----SIGFAIASLL----AGI 160 (412)
T ss_dssp HHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHH-HHHHHHHHHSS-HHHHHHHH----HHHHHHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHH-HHHHHHHHhcCCcchHHHHh----hHHHHHHHHH----hhe
Confidence 11222 2221 2222222233333333333333 33332 22233222222222 2333333344 443
Q ss_pred hhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCC--CCcc--hhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHH
Q 018113 189 LVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD--PSES--KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMY 264 (360)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (360)
+.+. +....|++.....++..++.....|+++++ .+++ .+..+...++..+++|+|++|.+.+..........
T Consensus 161 L~~i---~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~ 237 (412)
T PF01306_consen 161 LFNI---NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYD 237 (412)
T ss_dssp HHHH---HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------HHHHHHHTTSHHHHHHHHHHHHHHHHHH
T ss_pred eeee---CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHH
Confidence 3321 223556655544443333332222222111 1111 11111112345678999999998766555444433
Q ss_pred HHHHhhhccccCCCCCcc------hhHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHH
Q 018113 265 TFVFLWTPALSPNDEEIP------HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSS 324 (360)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 324 (360)
. .....|.|.....+.. .|...+...+.+++.-...+++.+|+|.|+ .+++...+..
T Consensus 238 v-fdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~--~Lllag~i~~ 300 (412)
T PF01306_consen 238 V-FDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKN--LLLLAGVIMA 300 (412)
T ss_dssp H-HHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH--HHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHh--HHHHHHHHHH
Confidence 3 3333444443222211 156667777788888899999999999994 4444444433
No 107
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.61 E-value=7.8e-13 Score=115.64 Aligned_cols=284 Identities=18% Similarity=0.202 Sum_probs=169.8
Q ss_pred cccchhHHHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHH
Q 018113 34 AFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYC 109 (360)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~ 109 (360)
+..++||.+++++.+..+.++++ ++...+..+-|| +....-+...++.+.+...+.++-|+.||+|-|....++.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 35577898888888888888766 344555566678 6666668888888888888889999999999999999999
Q ss_pred HHHHHHH-H--HHhc----chHH--HHHHHHHHHHhHhhhhhhhhhhHHhhhc----cccchhhHHHHHHHHHHHHHHHH
Q 018113 110 LTYILSC-I--TKHS----PQYK--ILMIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNG 176 (360)
Q Consensus 110 ~~~~~~~-l--~~~~----~~~~--~l~~~r~l~G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~ 176 (360)
.+.++|. + .+.. ++++ ....+..+.+.++-...... + -+++. ++|.... ..-..+..+|.+
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lP-s-kiA~~WF~~~qra~A~----~~~v~~n~LGva 190 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLP-S-KIAAVWFPPDQRAIAT----VLGVMGNPLGVA 190 (480)
T ss_pred HHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccc-c-HHHHhhCCcchhhhhh----hHHHhcchHHHH
Confidence 9999976 2 2222 2334 55667777777665554432 2 34442 4454422 222223334444
Q ss_pred HHHHHHhhhhhhhhcccCCCCch--hhhhhHHHHHHHHHHHhhhhccccCCCCcchhHH---HHHHHHHHHHhcchhHHH
Q 018113 177 LVAILSGLFGNLLVDSFSLGPVA--PFDAAACFLAIGMVIILSSWTENYGDPSESKDLL---TQFRGAAVAIASDEKIAL 251 (360)
Q Consensus 177 ~g~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 251 (360)
+|.++.|++.+.-.+..+..|.. .+.....+..+.+.......+++++.++...... .+..+..++.++|+++..
T Consensus 191 vg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F~i 270 (480)
T KOG2563|consen 191 VGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQFII 270 (480)
T ss_pred HHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCccHHH
Confidence 55555555444321111223322 3443433333333333222232222222111111 125567788999999999
Q ss_pred HHHHHHHHHhhHHHHHHhhhc-cccCCCC-CcchhHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHH
Q 018113 252 LGAIQSLFEGSMYTFVFLWTP-ALSPNDE-EIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVS 326 (360)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 326 (360)
..++..+..+..+.. .+.+. .....++ +...|.......+++++++.+.|.+.||.++-+ .............
T Consensus 271 l~~~ygi~~g~F~~l-~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk-~~~~v~~~~~~v~ 345 (480)
T KOG2563|consen 271 LAICYGIGLGLFNSL-STLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFK-LTTLVLYLFALVG 345 (480)
T ss_pred HHHHHhhhHHHHHHH-HHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHH-HHHHHHHHHHHHH
Confidence 888887766665553 33333 2222222 245688888899999999999999999987754 3344444333333
No 108
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.61 E-value=6.9e-14 Score=119.31 Aligned_cols=109 Identities=22% Similarity=0.311 Sum_probs=83.3
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhh
Q 018113 73 EIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVA 151 (360)
Q Consensus 73 ~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~ 151 (360)
-.|.+-+...+...+.++.+|.++||+|||+++..|....++.. +.+.+.|+..++++|++.|+..+.. ....+ +++
T Consensus 69 yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v~rA-iis 146 (451)
T KOG2615|consen 69 YAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SVIRA-IIS 146 (451)
T ss_pred hhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HHHHH-HHH
Confidence 34677778888888999999999999999999999999999987 7799999977777899999998887 44435 888
Q ss_pred hc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018113 152 EH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (360)
Q Consensus 152 ~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (360)
|. ++|+...+.....++ +|..+|+.+|+.+..
T Consensus 147 dV~sek~r~l~ms~v~~a~~----lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 147 DVVSEKYRPLGMSLVGTAFG----LGFILGPMIGGYLAQ 181 (451)
T ss_pred hhcChhhccceeeeeehhhh----cchhhcchhhhHHHh
Confidence 86 677776665555555 333344444444443
No 109
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.57 E-value=2.2e-12 Score=119.20 Aligned_cols=257 Identities=15% Similarity=0.038 Sum_probs=144.6
Q ss_pred HHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhc-----chHHHHHHHHHHH-HHH-HHHhcchHHHH-HH
Q 018113 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG-----RKRACVTYCLTYI-LSC-ITKHSPQYKIL-MI 129 (360)
Q Consensus 58 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~G-----rr~~l~~~~~~~~-~~~-l~~~~~~~~~l-~~ 129 (360)
+..|.+.+++|+|+++++...+...+...+ .+++|+++||++ ||+.++++.++.+ ++. ..+..++.... ..
T Consensus 47 ~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~ 125 (468)
T TIGR00788 47 PLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAA 125 (468)
T ss_pred hhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence 336667778999999999888888875555 566999999998 7777777776653 333 33444554444 44
Q ss_pred HHHHHHhHhhhhhhhhhhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHH
Q 018113 130 GRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACF 207 (360)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 207 (360)
..++.+++.+........ +..|. ++++...+.....+. ....|. .+++.+++.+.+.. +|+..|++.+.+
T Consensus 126 ~~~l~~~~~a~~dv~~da-~~~e~~~~~~~~~~~~~s~~~~-~~~~G~----~vg~~l~G~l~~~~--~~~~~f~~~a~l 197 (468)
T TIGR00788 126 FIFLAALAKALYDVLVDS-LYSERIRESPSAGPSLVSWMWG-ASATGG----LISSLLGGPLLDKT--LTRILFLITAAL 197 (468)
T ss_pred HHHHHHHHHHHHHHhHHH-HHhhhhhcCCCcCCCeeeHHHH-HHHHHH----HHHHHHHHHHHHhc--CcchHHHHHHHH
Confidence 788999998888887766 76665 333222222222222 222344 44444555555443 466777777666
Q ss_pred HHHHHHHHhhhhccccC--CCCcchh--------------HHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhh
Q 018113 208 LAIGMVIILSSWTENYG--DPSESKD--------------LLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWT 271 (360)
Q Consensus 208 ~~~~~~~~~~~~~~~~~--~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (360)
.++..... ...+|+++ +++..++ ..++......+.+++|.++.......+........ ....
T Consensus 198 ~ll~~~~~-~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~-~~~~ 275 (468)
T TIGR00788 198 LLLQLFVS-NLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGA-SGSV 275 (468)
T ss_pred HHHHHHHH-HhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCC-Ccee
Confidence 65553322 45566431 1110000 01111123344567777776544444311111110 1001
Q ss_pred ccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHH
Q 018113 272 PALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSL 327 (360)
Q Consensus 272 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 327 (360)
..+.++..+.++ |......+++.+++....+++.+|++.| +.+.....+.....
T Consensus 276 f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r--~~l~~~~~l~~~~~ 332 (468)
T TIGR00788 276 FCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR--LLFGVTTLLYTLSS 332 (468)
T ss_pred EEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH--HHHHHHHHHHHHHH
Confidence 112234455554 5666777888999999999999998877 44444444444433
No 110
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.57 E-value=2.5e-18 Score=158.91 Aligned_cols=243 Identities=21% Similarity=0.270 Sum_probs=143.2
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcc---hHHHHHHHHHHHHhHhhhhhhhhhhH
Q 018113 73 EIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSP---QYKILMIGRILGGIATSLLFSAFESW 148 (360)
Q Consensus 73 ~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~ 148 (360)
+.++..+..+++..+++++.|.++||+|||+.+..+.++..++. +.++++ +++.+.++|++.|++.|...+.. ..
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~-~~ 125 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVS-PI 125 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cc
Confidence 45788889999999999999999999999999999999999987 778888 99999999999999999998887 44
Q ss_pred Hhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccc-CCCCchhhhhhHHHHHHHHHHHhhhhccc--
Q 018113 149 LVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF-SLGPVAPFDAAACFLAIGMVIILSSWTEN-- 222 (360)
Q Consensus 149 ~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 222 (360)
++.|. ++|++.....+.... +|..++..++... .+.. ++.||..+.......++..+.. ...||+
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~----~G~~~~~~~~~~~----~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~ 196 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWA----LGILLASLIGYIV----SYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPESPR 196 (451)
T ss_pred ccccccccccccccccccccccc----ccccccccccccc----ccccccccccccccccccccccccccc-cccccccc
Confidence 88997 567664444433333 3332333333222 1112 2557776666555544333333 344543
Q ss_pred ----cCCCCcchhHHHHH-----------------H------HHHHHHhcchh----HHHHHHHHHHHHhhHHHHHHhhh
Q 018113 223 ----YGDPSESKDLLTQF-----------------R------GAAVAIASDEK----IALLGAIQSLFEGSMYTFVFLWT 271 (360)
Q Consensus 223 ----~~~~~~~~~~~~~~-----------------~------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 271 (360)
+++.+|+++..++. + ..+++++++++ .........+.....+.....+.
T Consensus 197 wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~ 276 (451)
T PF00083_consen 197 WLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYS 276 (451)
T ss_pred eecccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 22222222211110 0 01223444432 22222222222222323334555
Q ss_pred ccccCCCCCcchh-HHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHH
Q 018113 272 PALSPNDEEIPHG-FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLL 328 (360)
Q Consensus 272 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 328 (360)
|.+.++. +.+.. .......+...++.++...+.||+|||+ ....+.....++..
T Consensus 277 ~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~--~~i~~~~~~~~~~~ 331 (451)
T PF00083_consen 277 PSIFENA-GISNSFLATLILGLVNFLGTLLAIFLIDRFGRRK--LLIIGLLLMAICSL 331 (451)
T ss_pred ccccccc-cccccccccccccccccccccccccccccccccc--cccccccccccccc
Confidence 5555443 33333 2223445566677778889999999994 44444444444433
No 111
>PRK11462 putative transporter; Provisional
Probab=99.57 E-value=7e-12 Score=115.81 Aligned_cols=244 Identities=16% Similarity=0.217 Sum_probs=134.9
Q ss_pred hHH-HHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhh----hcchHHH-HHHHHHHHHHH-HHHhcch------
Q 018113 57 GPY-VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK----QGRKRAC-VTYCLTYILSC-ITKHSPQ------ 123 (360)
Q Consensus 57 ~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr----~Grr~~l-~~~~~~~~~~~-l~~~~~~------ 123 (360)
..+ ..++.+..|+++..+|.++...-+...+..|+.|.++|| +||||.. +++....+++. ++...|+
T Consensus 29 ~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~ 108 (460)
T PRK11462 29 MLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGK 108 (460)
T ss_pred HHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchH
Confidence 444 445556789999999999999999999999999999995 7986554 45666777766 4333332
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhHHhhh----ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-ccCCCCc
Q 018113 124 YKILMIGRILGGIATSLLFSAFESWLVAE----HNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD-SFSLGPV 198 (360)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~----~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~-~~~~~~~ 198 (360)
...+.+.-++..++.......-.+ +.+| .++|.+..+....... +|..+++.+...+....-+ ....+|+
T Consensus 109 ~~y~~~~~~~~~~~~t~~~ipy~a-l~~~lt~d~~eRt~l~s~r~~~~~----iG~~~~~~~~~plv~~~g~~~~~~g~~ 183 (460)
T PRK11462 109 MIYAAITYTLLTLLYTVVNIPYCA-LGGVITNDPTQRISLQSWRFVLAT----AGGMLSTVLMMPLVNLIGGDNKPLGFQ 183 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHH-HHHHhcCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhCCCchhhhHH
Confidence 234455555566666655444433 4444 3777775555444433 3333333333222222111 0012333
Q ss_pred hhhhhhHHHHHHHHHHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhh--HHHHHHhhhccccC
Q 018113 199 APFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGS--MYTFVFLWTPALSP 276 (360)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 276 (360)
....+.+++..++........+|+.++++++. +.++..+..++||+++.+.....+.... .......|...|..
T Consensus 184 ~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~~~----~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~ 259 (460)
T PRK11462 184 GGIAVLSVVAFMMLAFCFFTTKERVEAPPTTT----SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWIL 259 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhcceeccCCCccCC----CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhc
Confidence 33344444444444333233344322221111 2344556778888877664433332221 11112334444332
Q ss_pred CCCCcch--hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 277 NDEEIPH--GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 277 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
+.+. +.......+..+++.+++++++||+++|+
T Consensus 260 ---g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~ 294 (460)
T PRK11462 260 ---GTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVT 294 (460)
T ss_pred ---CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 2222 34555667788889999999999999885
No 112
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.53 E-value=1.9e-12 Score=118.21 Aligned_cols=161 Identities=14% Similarity=0.175 Sum_probs=107.1
Q ss_pred hHHHHHHHHhhCCCh--------hhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhc-c---h
Q 018113 57 GPYVYYLYSTYGFGK--------GEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS-P---Q 123 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~--------~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~-~---~ 123 (360)
..+.+...++.|.++ ++.+...+...+...++..+.|+++||+|||+++..+.+..+++. +.... + +
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~ 307 (418)
T TIGR00889 228 NIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFG 307 (418)
T ss_pred HHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhh
Confidence 344566666776554 556888888888888888899999999999999999999888865 44442 2 2
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccC----CC
Q 018113 124 YKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS----LG 196 (360)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~----~~ 196 (360)
.+.+++.+++.|++.+...+.... ++.|. ++|+...+.. ......+|..++|.+++.+.++.+ ++
T Consensus 308 ~~~l~l~~~l~g~~~~~~~~~~~~-~i~~~~p~~~~g~~~g~~-------~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~ 379 (418)
T TIGR00889 308 YALLFLSMIVYGCAFDFFNISGSV-FVEKEVPVHIRASAQGLF-------TLMCNGFGSLLGYILSGVMVEKMFAYGTFD 379 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHHHHHHH-------HHHHHhhHHHHHHHHHHHHHHHhccccCCc
Confidence 456677899999998887676644 77776 3444422222 112233555666666666665543 56
Q ss_pred CchhhhhhHHHHHHHHHHHhhhhccccCC
Q 018113 197 PVAPFDAAACFLAIGMVIILSSWTENYGD 225 (360)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (360)
|+..|...+.+.++..+......+|++++
T Consensus 380 ~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 380 WQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 77777777666666666555666665443
No 113
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.49 E-value=1.5e-12 Score=113.80 Aligned_cols=194 Identities=12% Similarity=0.042 Sum_probs=120.2
Q ss_pred hcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccc---
Q 018113 120 HSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF--- 193 (360)
Q Consensus 120 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~--- 193 (360)
..++++.++++-++.|.|.+...+..++ ++++. +++.+..+..+..++ +|..++|.+++.+....
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~-~v~~~~~~~~~~~~l~~~~~~~~--------~G~~~gP~i~~~~i~~~~~~ 76 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANP-YVSILGPIETAASRLALTQAFNK--------LGTTVAPLFGGSLILSGAGD 76 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHH-HHHHHCCcchHHHHHHHHHHHhh--------hHHHHHHHHHHHHHhcCCcc
Confidence 4578999999999999999999999988 87765 445555555555544 55555555555444211
Q ss_pred -----------CCCCchhhhhhHHHHHHHH-HHHhhhhccccCCCCcchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHh
Q 018113 194 -----------SLGPVAPFDAAACFLAIGM-VIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEG 261 (360)
Q Consensus 194 -----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
.++|+.+|++.+.+..+.. .+.....||.+++++++.+..++ ...++.+++|+.+...+..++..+
T Consensus 77 ~~~~~~~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~f~yvg 154 (310)
T TIGR01272 77 LSMQVATANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVARVSSGDT--TQKTSAFQFTHLVLGALGIFVYVG 154 (310)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccccccccccc--cchhhHHhhHHHHHHHHHHHHHHH
Confidence 1467788875544433333 33223445433322221111110 112345677777776555555554
Q ss_pred hHHHHHHhhhccccCCC--CCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHH
Q 018113 262 SMYTFVFLWTPALSPND--EEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSL 327 (360)
Q Consensus 262 ~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 327 (360)
.... ...|.+.|+++. .+.++ +...+.+..+.++|+++.+++.||+++|+ .+..+.....+..
T Consensus 155 ~e~~-~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~--~l~~~~~l~~~~~ 222 (310)
T TIGR01272 155 AEVS-AGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGR--YLAFNAFLAVLLS 222 (310)
T ss_pred HHHH-HHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH--HHHHHHHHHHHHH
Confidence 5555 688999998643 45554 56677888899999999999999999874 4444444444433
No 114
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.49 E-value=8.6e-11 Score=107.87 Aligned_cols=138 Identities=20% Similarity=0.181 Sum_probs=91.9
Q ss_pred HHHHH-HHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhh-cchHHHHHHHHHHHHHH-HHHhcc-hHHHHHHHHHH
Q 018113 58 PYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSC-ITKHSP-QYKILMIGRIL 133 (360)
Q Consensus 58 ~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~-l~~~~~-~~~~l~~~r~l 133 (360)
.++|. +.+++|+++.+.+.+.........+..+++|+++||+ ||||+++.+.++.+++. +.+..+ +...+.++..+
T Consensus 30 ~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~l 109 (493)
T PRK15462 30 ALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAI 109 (493)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Confidence 44444 4567899999999998888888888888999999999 99999999999988876 544432 22334444444
Q ss_pred HHhHhhhhhhhhhhHHhhhc--c---ccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHH
Q 018113 134 GGIATSLLFSAFESWLVAEH--N---KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAAC 206 (360)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~--~---~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 206 (360)
.+++.|...+...+ +++|. + +|+. .++..+..++ +|..++|.+.+++.+..+ |+..|.+.+.
T Consensus 110 i~iG~G~~~~~~~a-lv~elfp~~~~~R~s-------gf~i~Y~~~n-lG~~iap~l~g~L~~~~G--w~~~F~iaai 176 (493)
T PRK15462 110 IVCGYGLFKSNVSC-LLGELYEPTDPRRDG-------GFSLMYAAGN-VGSIIAPIACGYAQEEYS--WAMGFGLAAV 176 (493)
T ss_pred HHHhcccccccHHH-HHHHHCCCCCccccc-------eehHHHHHHH-HHHHHHHHHHHHHHhhhC--hHHHHHHHHH
Confidence 45556665555534 77775 2 2433 2333334344 667777777777766544 5566665543
No 115
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.48 E-value=1.3e-10 Score=106.83 Aligned_cols=246 Identities=13% Similarity=0.092 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHH-HH-HHHh-cchHH-HHHHHHHHHHhHhhhhhhhhhhHHh
Q 018113 75 GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SC-ITKH-SPQYK-ILMIGRILGGIATSLLFSAFESWLV 150 (360)
Q Consensus 75 g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~-~~-l~~~-~~~~~-~l~~~r~l~G~~~~~~~~~~~~~~i 150 (360)
+...++..+...+..|+.|.++|+-|+||.++......++ +. +..+ .++.+ ...+.-++.-++.+.......+ ++
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna-~L 151 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA-YL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH-Hh
Confidence 5667778888889999999999999987777766555544 44 4444 34433 3333334443444444333333 55
Q ss_pred hhc---cccc--hh-----------------hHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh---cc---cCCCCchhhh
Q 018113 151 AEH---NKRG--FE-----------------QQWLSITFSKAIFLGNGLVAILSGLFGNLLV---DS---FSLGPVAPFD 202 (360)
Q Consensus 151 ~~~---~~r~--~~-----------------~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~---~~---~~~~~~~~~~ 202 (360)
.|. +++- .. ........+.+...|+ +|.++.-.+.-.+. +. ..+..|..+.
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy-~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGY-IGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHH-HHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 443 2220 00 0000113333444444 33333322222211 11 1234466666
Q ss_pred hhHHHHHHHHHHHhhhhccccC-CCCc-ch----hHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccC
Q 018113 203 AAACFLAIGMVIILSSWTENYG-DPSE-SK----DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSP 276 (360)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (360)
..+...++..+......|+.++ +..+ .+ ...++..+..+++.|+|....+.+...+...+... +......|..
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~t-i~~~~~i~a~ 309 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNT-IISFAGIYAT 309 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 6665555555544445555443 1111 11 22455666777888889988887777777766666 5777778888
Q ss_pred CCCCcchh---HHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHH
Q 018113 277 NDEEIPHG---FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVS 323 (360)
Q Consensus 277 ~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 323 (360)
+..+.+.. .......+.+++|+++.+++.||+|.|+.+.+.......
T Consensus 310 ~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 310 EVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILW 359 (477)
T ss_pred HhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 88888774 344566888999999999999999998433444444333
No 116
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.42 E-value=5.1e-11 Score=108.17 Aligned_cols=147 Identities=12% Similarity=0.056 Sum_probs=95.2
Q ss_pred HHHHH-HHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 58 PYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 58 ~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
...|. +.+++|.++.+.+.+.+...+...++.++.|+++||+|||+.+..+.....+.. .....++.+.++..+++.+
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 316 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNA 316 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34554 446789999999988777777677778899999999999998877766555444 3445677777788888888
Q ss_pred hHhhhhhhhhhhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 213 (360)
++.+...+.... +..|. ++|+...+.... ... +|..+++.+++.+.+.. +|+..+.....+.++..+
T Consensus 317 ~~~g~~~~~~~~-~~~~~~p~~~g~~~~~~~~----~~~----lg~~~g~~l~G~i~~~~--g~~~~~~~~~~~~~~~~~ 385 (393)
T PRK15011 317 IYIGILGGIGML-YFQDLMPGQAGSATTLYTN----TSR----VGWIIAGSLAGIVAEIW--NYHAVFWFALVMIIATLF 385 (393)
T ss_pred HHHHHHHHHHHH-HHHHhCCCCcchHHHHHHH----HHH----HHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHH
Confidence 877766555433 55664 445553333222 223 44455555555555543 455667666666655555
Q ss_pred HH
Q 018113 214 II 215 (360)
Q Consensus 214 ~~ 215 (360)
..
T Consensus 386 ~~ 387 (393)
T PRK15011 386 CL 387 (393)
T ss_pred HH
Confidence 44
No 117
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.42 E-value=3.8e-11 Score=107.91 Aligned_cols=187 Identities=19% Similarity=0.131 Sum_probs=126.2
Q ss_pred ccccchhHHHHHHHHHHHHHhhhhh----HH-HHHHHH-hhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcc-hHHH
Q 018113 33 SAFNSFKNNYLLVYSLMMAGDWLQG----PY-VYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR-KRAC 105 (360)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Gr-r~~l 105 (360)
.+.++.+|+.+.++.+..+....+. +- -|++.+ |.+-+.+..|++.++..++..+.++.+|....|.++ |+.+
T Consensus 26 ~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pl 105 (488)
T KOG2325|consen 26 LDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPL 105 (488)
T ss_pred ccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCH
Confidence 3445667787777777777776662 22 444444 577788888999999999999999999999999996 7778
Q ss_pred HHHHHHHHHHH-HH---Hh-cc-hHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHH
Q 018113 106 VTYCLTYILSC-IT---KH-SP-QYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNG 176 (360)
Q Consensus 106 ~~~~~~~~~~~-l~---~~-~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~ 176 (360)
+.+.++..++. +- .. .+ ..+.++++|++.|+|.+.. ..... |+++. ++|.+..+. .+.+..+|..
T Consensus 106 i~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~-Y~a~~s~~~dR~rA~a~----~~~~~vlg~i 179 (488)
T KOG2325|consen 106 IVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRA-YIADASTVEDRPRAFAA----TSGGFVLGII 179 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHH-HHHhccCccchHHHHHH----hhhHHHHHHH
Confidence 88888888876 32 22 33 5678899999999998776 45545 87774 666664333 3334455555
Q ss_pred HHHHHHhhhhhhhhcc------cCCC-CchhhhhhHHHHHHHHHHHhhhhccccCC
Q 018113 177 LVAILSGLFGNLLVDS------FSLG-PVAPFDAAACFLAIGMVIILSSWTENYGD 225 (360)
Q Consensus 177 ~g~~~~~~l~~~l~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (360)
+|+.+++.+++...+. ..|+ +..+-++.+.+.++..+++....+|.+.+
T Consensus 180 lGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 180 LGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred HhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccC
Confidence 6666665555543211 1111 24556777777777777776666665443
No 118
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.37 E-value=3.7e-11 Score=110.11 Aligned_cols=143 Identities=13% Similarity=0.039 Sum_probs=99.1
Q ss_pred HhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhhhhh
Q 018113 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFS 143 (360)
Q Consensus 65 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~ 143 (360)
++.+.+..+.|.+.+...+...++.++.|++.||+|||+.+..+.++.+++. +.+++++.+.+...+++.|++.+...+
T Consensus 255 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~ 334 (420)
T PRK09528 255 ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLV 334 (420)
T ss_pred hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 3446677788888888888778888899999999999999999888888876 667788888888999999988877656
Q ss_pred hhhhHHhhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHH
Q 018113 144 AFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (360)
Q Consensus 144 ~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (360)
.... ++.|. ++|.+.. .+..+.+.+..+|..+++.+.+++.|..| |+..|...+.+.++...+.
T Consensus 335 ~~~~-~~~~~~~~~~~a~-----~~~~~~~~~~~lg~~ig~~~~G~l~~~~G--~~~~f~~~~~~~~i~~~~~ 399 (420)
T PRK09528 335 GVFK-YITLNFDVRLSAT-----IYLVGFQFAKQLGAVFLSTLAGNLYDSIG--FQGTYLILGGIVLLFTLIS 399 (420)
T ss_pred HHHH-HHHHHcCccceee-----eeeehHHHHHHHHHHHHHHHHHHHHHhhC--chHHHHHHHHHHHHHHHHH
Confidence 5544 66654 2221110 11111223344667777777777777655 5566766655555444443
No 119
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.36 E-value=1.9e-10 Score=107.43 Aligned_cols=157 Identities=15% Similarity=0.137 Sum_probs=93.1
Q ss_pred hHHHHHHH-HhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHH-HH-H--HhcchHHHHHHHH
Q 018113 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS-CI-T--KHSPQYKILMIGR 131 (360)
Q Consensus 57 ~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~l-~--~~~~~~~~l~~~r 131 (360)
..++|.+. +++|.+..+.+.......++..++.+..|+++||+|||+++..+.+...++ .. . ..+++...+.+++
T Consensus 270 ~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (490)
T PRK10642 270 LTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGL 349 (490)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 34566665 567998887777777777777788889999999999999988877654432 21 2 2345677778889
Q ss_pred HHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHH
Q 018113 132 ILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFL 208 (360)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 208 (360)
++.|++.+...... ..++.|. +.|+... +...+++. +++.++|.+.+++.+..+ +|+.++.......
T Consensus 350 ~~~g~~~~~~~g~~-~~~~~~~~p~~~Rg~~~-------g~~~~~~~-~~g~~~p~i~g~l~~~~~-~~~~~~~~~~~~~ 419 (490)
T PRK10642 350 LMLAVILNCFTGVM-ASTLPAMFPTHIRYSAL-------AAAFNISV-LVAGLTPTLAAWLVESTQ-NLMMPAYYLMVVA 419 (490)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHCCCccchHHH-------HHHHHHHH-HHHHHHHHHHHHHHHHhC-CchHHHHHHHHHH
Confidence 88888766554444 3355554 4555422 22233333 223445555555554322 3444444433333
Q ss_pred HHHHHHHhhhhccccC
Q 018113 209 AIGMVIILSSWTENYG 224 (360)
Q Consensus 209 ~~~~~~~~~~~~~~~~ 224 (360)
++..+.. ...||+++
T Consensus 420 ~i~~~~~-~~~pes~~ 434 (490)
T PRK10642 420 VIGLITG-VTMKETAN 434 (490)
T ss_pred HHHHHHH-HHhccccC
Confidence 3333333 34466544
No 120
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.36 E-value=2.8e-10 Score=102.90 Aligned_cols=150 Identities=11% Similarity=0.109 Sum_probs=110.0
Q ss_pred hhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHH
Q 018113 56 QGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILG 134 (360)
Q Consensus 56 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~ 134 (360)
..++.|...+|+|.++.+.|.+.....+...+...+.|++.||+|+|+.+..+.+...+.. +.+++++.+.++..+++.
T Consensus 224 ~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~ 303 (382)
T TIGR00902 224 YYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILH 303 (382)
T ss_pred HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHH
Confidence 3456677778899999999999888888788888899999999999999999999998887 678899999999999999
Q ss_pred HhHhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHH
Q 018113 135 GIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (360)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (360)
|+..+...+.... ++.+. ++... +..++.+ ...+.++|..+++.+++++.|+.+ . ..|...+.+.++..++
T Consensus 304 g~~~~~~~~~~~~-~i~~~-~~~~~-~~~q~~~---~~~~~g~g~~~g~~~~G~l~~~~g--~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 304 CGTFAVCHLAAMR-YIAAQ-PGSEI-AKLQALY---NALAMGGLIAIFTAFAGFIYPTLG--A-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHH-HHHhC-CHhhH-HHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcc--H-HHHHHHHHHHHHHHHH
Confidence 9999999888755 77765 22121 1122222 233455667777777777777654 2 3455555555544433
No 121
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.34 E-value=3.3e-10 Score=102.11 Aligned_cols=143 Identities=15% Similarity=0.193 Sum_probs=94.5
Q ss_pred HHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhh
Q 018113 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSL 140 (360)
Q Consensus 62 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~ 140 (360)
.+.+++|.++.+.+...........++.++.|++.||+|||+++..+.+...+.. ...+.++.+.+...+++.|++.+.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456789999999988777666666777789999999999999888776655544 445567777788888999998887
Q ss_pred hhhhhhhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHH
Q 018113 141 LFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (360)
Q Consensus 141 ~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (360)
..+.... ++.|. ++++. ..+..+.... +|..+++.+.+.+.+..+ |+..+...+.+.++..+..
T Consensus 305 ~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~----~g~~~g~~~~g~~~~~~g--~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 305 LAGIGML-YFQDLMPGRAGA----ATTLYTNTGR----VGWIIAGSVGGILAERWS--YHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHHHHHH-HHHHhCcchhhH----HHHHHHHHHH----HHHHHHHHHHHHHHHhcc--chhHHHHHHHHHHHHHHHH
Confidence 7666544 66665 33332 2222222222 555666666666555544 5566666666555555444
No 122
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.34 E-value=3.3e-10 Score=103.11 Aligned_cols=146 Identities=21% Similarity=0.260 Sum_probs=93.6
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
.+++|...++.|.+ +.+...+...++..++.++.|++.||+|||+.+..+....+++. +..+.++.+.+++..++.|
T Consensus 236 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 313 (399)
T PRK05122 236 ATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTG 313 (399)
T ss_pred HHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 34556666666663 34555555556666777889999999999999988888777776 5566778888888899999
Q ss_pred hHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 212 (360)
++.+..++.... ...|. ++|++..+. ++.... +|..+++.+.+.+.+.. +|+..+...+.+.++..
T Consensus 314 ~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~----~~~~~~----~g~~~~~~~~g~l~~~~--g~~~~~~~~~~~~~~~~ 382 (399)
T PRK05122 314 FGFSLVFPALGV-EAVKRVPPQNRGAALGA----YSVFLD----LSLGITGPLAGLVASWF--GYPSIFLAAALAALLGL 382 (399)
T ss_pred HhHHHHHHHHHH-HHHHhCCHHHHHHHHHH----HHHHHH----HHHHHHHHHHHHHHHHc--CHHHHHHHHHHHHHHHH
Confidence 999887776544 44443 445553332 222223 34444444555555544 45566666666555555
Q ss_pred HHH
Q 018113 213 VII 215 (360)
Q Consensus 213 ~~~ 215 (360)
...
T Consensus 383 ~~~ 385 (399)
T PRK05122 383 ALT 385 (399)
T ss_pred HHH
Confidence 444
No 123
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.33 E-value=6.6e-10 Score=100.50 Aligned_cols=146 Identities=18% Similarity=0.143 Sum_probs=95.2
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHh
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGI 136 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~ 136 (360)
..++|.+.++.|.++++.|...+...+...+++.+.|++.||+|+|+++..+.....++.+... + ........++.|+
T Consensus 220 ~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~-~~~~~~~~~l~g~ 297 (381)
T PRK03633 220 YGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML-S-QAAMAPALFILGA 297 (381)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-h-hHHHHHHHHHHHH
Confidence 3457777888899999999888888888888888999999999999999888777776552222 2 2233456677787
Q ss_pred HhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHH
Q 018113 137 ATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (360)
Q Consensus 137 ~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 212 (360)
+.....|.... .+.|..++++..+ ... ....+..+|..++|.+++++.|+.++ +..|...+.+.++..
T Consensus 298 ~~~~~~p~~~~-~~~~~~~~~~~~~-~~~----~~~~~~~lG~~igp~~~G~l~~~~g~--~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 298 AGFTLYPVAMA-WACEKVEHHELVA-MNQ----ALLLSYTVGSLLGPSFTAMLMQNYSD--NLLFIMIASVSFIYL 365 (381)
T ss_pred HHHhHHHHHHH-HHHccCCHHHHHH-HHH----HHHHHHHHHHHHHHHHHHHHHHHhCc--cHHHHHHHHHHHHHH
Confidence 76666677655 5566422212111 111 11234446667777777777776554 455665555554443
No 124
>PRK09952 shikimate transporter; Provisional
Probab=99.32 E-value=4.4e-10 Score=103.51 Aligned_cols=150 Identities=16% Similarity=0.070 Sum_probs=92.4
Q ss_pred HHHHH-HHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HH--Hh-c-chHHHHHHHH
Q 018113 58 PYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT--KH-S-PQYKILMIGR 131 (360)
Q Consensus 58 ~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~--~~-~-~~~~~l~~~r 131 (360)
.+.|. +.+++|.+..+...+.......+.++.++.|+++||+|||+++..+.++..++. .. .. . ++...+....
T Consensus 271 ~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (438)
T PRK09952 271 AFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSI 350 (438)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 44444 456788888765555444455566777789999999999999888876655543 22 11 2 2344444556
Q ss_pred HHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHH
Q 018113 132 ILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFL 208 (360)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 208 (360)
++.+++.+...+...+ +++|. +.|+. ..+..+.++..+++.++|.+.+++.+..+.+|..++.......
T Consensus 351 ~l~~~~~~~~~~~~~~-~~~e~~p~~~r~t-------g~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~ 422 (438)
T PRK09952 351 MLANIAHDMVVCVQQP-MFTEMFGASYRYS-------GAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGC 422 (438)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHCCcchhHH-------HHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 6667777766665534 77775 22322 3344445566667777888888877654445666665555555
Q ss_pred HHHHHHH
Q 018113 209 AIGMVII 215 (360)
Q Consensus 209 ~~~~~~~ 215 (360)
++..+..
T Consensus 423 ~i~~v~~ 429 (438)
T PRK09952 423 LISAMTA 429 (438)
T ss_pred HHHHHHH
Confidence 5544444
No 125
>PRK03545 putative arabinose transporter; Provisional
Probab=99.32 E-value=5.4e-10 Score=101.40 Aligned_cols=143 Identities=15% Similarity=0.086 Sum_probs=91.3
Q ss_pred HHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH--HHHhcchHHHHHHHHHHHHhHh
Q 018113 61 YYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC--ITKHSPQYKILMIGRILGGIAT 138 (360)
Q Consensus 61 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~--l~~~~~~~~~l~~~r~l~G~~~ 138 (360)
|.+.+++|.|..+.+...+...+++.++..+.|+++||+|||+.. .+..+...+. +....++.+.+.++.++.|++.
T Consensus 230 ~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~ 308 (390)
T PRK03545 230 PFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAI 308 (390)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 344556899999999988888888888899999999999988754 4444444433 3345677788888889999987
Q ss_pred hhhhhhhhhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHH
Q 018113 139 SLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (360)
Q Consensus 139 ~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (360)
+...+.... .+.|. ++|++..+ .++....+|. .+++.+++.+.++ ++++..+...+.+.++.....
T Consensus 309 ~~~~~~~~~-~~~~~~~~~~~~~~g----~~~~~~~~g~----~~G~~~~G~~~~~--~g~~~~~~~~~~~~~~~~~~~ 376 (390)
T PRK03545 309 MCIGLAMQV-KVLKLAPDATDVAMA----LFSGIFNIGI----GAGALLGNQVSLH--LGLSSIGYVGAALALAALVWS 376 (390)
T ss_pred hcchHHHHH-HHHHhCCCcHHHHHH----HHHHHHHHHH----HHHHHHHHHHHhc--cChhHHHHHHHHHHHHHHHHH
Confidence 666554433 45443 34444222 2332333344 4455555555555 445566777666666555554
No 126
>PRK03699 putative transporter; Provisional
Probab=99.32 E-value=4.7e-10 Score=101.89 Aligned_cols=144 Identities=13% Similarity=0.060 Sum_probs=97.9
Q ss_pred hHHHHHHH-HhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHH
Q 018113 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILG 134 (360)
Q Consensus 57 ~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~ 134 (360)
..+.|.+. +++|+|..+.+.+.+...++..++.+..|+++||+|||+.+.....+..+.. +....++.+.+.+..++.
T Consensus 225 ~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (394)
T PRK03699 225 ISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGL 304 (394)
T ss_pred HHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 34566666 5689999999999888888888898999999999999999888777666655 445667777777777888
Q ss_pred HhHhhhhhhhhhhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHH
Q 018113 135 GIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (360)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 211 (360)
|++.+..++.... +..|. ++++.. .+.... ...+|..++|.+.+.+.+..++ +..++....+..+.
T Consensus 305 G~~~~~~~~~~~~-~~~~~~~~~~~~~-------~g~~~~-~~~~g~~i~p~~~G~l~~~~g~--~~~~~~~~~~~~~~ 372 (394)
T PRK03699 305 GFFSSAIYTTIIT-LGSQQTKVASPKL-------VNFILT-CGTIGTMLTFVVTSPIVAHFGL--QAALLTANGLYAVV 372 (394)
T ss_pred HHHHHHHHHHHHH-HHHHHccCCCHHH-------HHHHHH-hhhHHHHHHHHHHHHHHHHhCc--hhhhhhhHHHHHHH
Confidence 8887777666544 54443 222221 111222 2236777777777777776554 45565554444444
No 127
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.31 E-value=7e-10 Score=97.63 Aligned_cols=203 Identities=22% Similarity=0.201 Sum_probs=122.4
Q ss_pred chhHHHHHHHHHHHHHHHhh---hccc-cccCCCc-c-------cccchh-HHHHHHHHHHHHHhhhhhHH-HHHHHHhh
Q 018113 2 EMFFYLVFGALGAVVAALEL---SKTN-KDRINTS-S-------AFNSFK-NNYLLVYSLMMAGDWLQGPY-VYYLYSTY 67 (360)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~-~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 67 (360)
.++||.+|.....+.+.... +.-+ ++.++++ . ..++.+ +..+....+.........+| -|.+.+..
T Consensus 163 ~~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~~~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~ 242 (394)
T COG2814 163 LFGWRATFLAIAVLALLALLLLWKLLPPSEISGSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVA 242 (394)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHcc
Confidence 57899988877766555442 2222 1111111 1 112222 22233333333333333466 66777789
Q ss_pred CCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH--HHHhcchHHHHHHHHHHHHhHhhhhhhhh
Q 018113 68 GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC--ITKHSPQYKILMIGRILGGIATSLLFSAF 145 (360)
Q Consensus 68 g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~--l~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 145 (360)
|.|.++++++...+.+++.+++...|+++|| +.|+.+.....+.++.. +....++.+..+..-++.|++........
T Consensus 243 g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~ 321 (394)
T COG2814 243 GFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGL 321 (394)
T ss_pred CCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHH
Confidence 9999999999999999999999999999999 99999888878777765 44556666666777777777666553333
Q ss_pred hhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHh
Q 018113 146 ESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (360)
Q Consensus 146 ~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (360)
.. -+++. +.++...+ .+....++|..+|..+++.+ .|+ +++....+..+.+.+++..+..
T Consensus 322 ~~-~~a~~~p~~~~~a~s----l~~aa~nlgia~GA~lGG~v----~~~--~g~~~~~~~~a~l~~~a~~~~~ 383 (394)
T COG2814 322 QT-RLARLAPDAADLAGS----LNVAAFNLGIALGAALGGLV----LDA--LGYAATGWVGAALLLLALLLAL 383 (394)
T ss_pred HH-HhcccCCCchHHHHH----HHHHHHHHHHHHHHHHHHHH----HHh--hchHHHHHHHHHHHHHHHHHHH
Confidence 22 33432 34444444 44444445554555555443 344 4555667777777666666653
No 128
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.31 E-value=2.7e-10 Score=102.55 Aligned_cols=142 Identities=15% Similarity=0.090 Sum_probs=95.6
Q ss_pred HHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchH--HHHHHHHHHH
Q 018113 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQY--KILMIGRILG 134 (360)
Q Consensus 58 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~--~~l~~~r~l~ 134 (360)
.+.+++.+++|.++.+.+...+...+...++.++.|++.||+|||+.+..+.....++. +..+.++. ..+....++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (377)
T TIGR00890 226 GLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALV 305 (377)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHH
Confidence 34555668899999888988888888888899999999999999999998888887776 45555532 3344567778
Q ss_pred HhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHH
Q 018113 135 GIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (360)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 210 (360)
|++.+...+.... ++.|. ++|+...+.... ...+|..+++.+.+.+.+..+ |+..+...+.+.++
T Consensus 306 g~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~~--------~~~~g~~~~~~~~g~l~~~~g--~~~~f~~~~~~~~~ 373 (377)
T TIGR00890 306 FFTWGGTISLFPS-LVSDIFGPANSAANYGFLYT--------AKAVAGIFGGLIASHALTEIG--FEYTFIVTGAFALT 373 (377)
T ss_pred HHHhccchhccHH-HHHHHhhhhhhhhHhHHHHH--------HHHHHHHHHHHHHHHHHhhhc--hhhHHHHHHHHHHH
Confidence 8877776655433 66664 555553333222 223555666666666666544 44566665554443
No 129
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.31 E-value=7.9e-10 Score=100.36 Aligned_cols=157 Identities=15% Similarity=0.091 Sum_probs=98.1
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHH-hcchHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK-HSPQYKILMIGRILG 134 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~-~~~~~~~l~~~r~l~ 134 (360)
..+.|.+.+++|.+..+.|...+...++..++.+..|++.||+|||+.+..+..+..++. +.. ..++...+. -++.
T Consensus 225 ~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~ 302 (393)
T PRK09705 225 IAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AMVC 302 (393)
T ss_pred HHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HHHH
Confidence 345777778899999999999998888889999999999999999999988877766665 333 233332222 2456
Q ss_pred HhHhhhhhhhhhhHHhhhc----cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHH
Q 018113 135 GIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (360)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 210 (360)
|++.+...+.... ...+. ++|+. ..+.....++ ++..++|.+.+++.|..| .+...+.+.....++
T Consensus 303 g~g~g~~~~~~~~-~~~~~~~~~~~~g~-------~~g~~~~~~~-~~~~~gp~~~G~l~~~~g-~~~~~~~~~~~~~~~ 372 (393)
T PRK09705 303 GLGLGGAFPLCLL-LALDHSVQPAIAGK-------LVAFMQGIGF-IIAGLAPWFSGVLRSISG-NYLMDWAFHALCVVG 372 (393)
T ss_pred HHhccchHHHHHH-HHHhhcCCHHHHHH-------HHHHHHHHHH-HHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHHH
Confidence 7777777665533 33333 22333 2222233333 455666777777776544 244556555555554
Q ss_pred HHHHHhhhhccccCC
Q 018113 211 GMVIILSSWTENYGD 225 (360)
Q Consensus 211 ~~~~~~~~~~~~~~~ 225 (360)
.........||++++
T Consensus 373 ~~~~~~~~~~~~~~~ 387 (393)
T PRK09705 373 LMIITLRFAPARFPQ 387 (393)
T ss_pred HHHHHHHhccccccc
Confidence 444443445555443
No 130
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.31 E-value=5.7e-10 Score=101.82 Aligned_cols=148 Identities=18% Similarity=0.133 Sum_probs=95.8
Q ss_pred hHHHHHHHHhhCCChhh----hHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGE----IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGR 131 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~----~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r 131 (360)
.+..+...++.+.+..+ .+.+.+...++..+..+..|+++||+|||+.+..+.....++. ...+.++.+.+.+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (408)
T PRK09874 239 APILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILR 318 (408)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 45555555554433333 2444455556667777889999999999999998887777665 556667888888899
Q ss_pred HHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHH
Q 018113 132 ILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFL 208 (360)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 208 (360)
++.|++.+...+.... .+.+. ++|++..+..... .. +|..++|.+++.+.+.. +|+..|.+.+.+.
T Consensus 319 ~~~g~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~----~~----~g~~~gp~~~G~l~~~~--g~~~~f~~~~~~~ 387 (408)
T PRK09874 319 FLLGAADGALLPAVQT-LLVYNSSNQIAGRIFSYNQSF----RD----IGNVTGPLMGAAISANY--GFRAVFLVTAGVV 387 (408)
T ss_pred HHHHhhhHhhHHHHHH-HHHHhCCcccceeeehHHHHH----HH----HHHHhhHHHHHHHHhhc--chhHHHHHHHHHH
Confidence 9999999888777644 44443 4456644433332 22 44455555555555543 4556777777666
Q ss_pred HHHHHHH
Q 018113 209 AIGMVII 215 (360)
Q Consensus 209 ~~~~~~~ 215 (360)
++..+..
T Consensus 388 l~~~~~~ 394 (408)
T PRK09874 388 LFNAVYS 394 (408)
T ss_pred HHHHHHH
Confidence 6655555
No 131
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.30 E-value=9.5e-10 Score=98.17 Aligned_cols=154 Identities=25% Similarity=0.255 Sum_probs=107.0
Q ss_pred hhhhHHHHHHHHhhC----CChhhhHHHHHHHHHHHhhhhhhhhhhhhhh-cchHHHHHHHHHHHHHH-HHHhc--chHH
Q 018113 54 WLQGPYVYYLYSTYG----FGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSC-ITKHS--PQYK 125 (360)
Q Consensus 54 ~~~~~~~~~~~~~~g----~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~-l~~~~--~~~~ 125 (360)
++..++..+++.+++ +|+++...+++.+..-..+...++|+++||+ |+|++++.+.++..+|. +.+.+ .+..
T Consensus 39 GmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~ 118 (498)
T COG3104 39 GMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPG 118 (498)
T ss_pred hhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcccccccc
Confidence 334677778888887 9999998888888777788888999999996 99999999999999998 55665 4688
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhh
Q 018113 126 ILMIGRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDA 203 (360)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~ 203 (360)
.+.++-.+.++|.|..=+...+ +++|. +++.++-+-. ..+..+.+ +|+.++|.+.+++.+..+ |...|..
T Consensus 119 gl~i~L~~I~iG~Gl~K~NiS~-llg~ly~~~DprrD~gF-t~fY~~iN----iGsl~~p~i~~~~~~~~g--~~~gF~~ 190 (498)
T COG3104 119 GLYIGLALIIVGTGLFKPNISS-LLGELYPKDDPRRDGGF-TLFYMGIN----IGSLIAPIITGLLAINYG--WHVGFGL 190 (498)
T ss_pred HHHHHHHHHHhccccccccHHH-HHHHhcCCCCcccCCCc-cEEEEEee----hHHHHHHHHHHHHHHhhC--HHHHHHH
Confidence 8999999999999999887745 88775 1111111111 11222333 555666666666655555 4466766
Q ss_pred hHHHHHHHHHHH
Q 018113 204 AACFLAIGMVII 215 (360)
Q Consensus 204 ~~~~~~~~~~~~ 215 (360)
.++-....++..
T Consensus 191 aavGm~~gl~~f 202 (498)
T COG3104 191 AAVGMIIGLVIF 202 (498)
T ss_pred HHHHHHHHHHHH
Confidence 655554444443
No 132
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.29 E-value=9.5e-10 Score=99.49 Aligned_cols=149 Identities=12% Similarity=0.090 Sum_probs=103.5
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
..+.|...+|.|.+..+.|...+...+...+...+.|++.||+|+|+.+..+.+..+++. +.+..++.+.+++..++.|
T Consensus 225 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 304 (382)
T PRK11128 225 YGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHC 304 (382)
T ss_pred HHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 344556667899999999999888888777888899999999999999999888888776 6677889998899999999
Q ss_pred hHhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (360)
++.+...+.... ++.+.+ +++... ..+.....++.+|..+++.+++.+.|..++ ..++..+.+.++....
T Consensus 305 ~~~~~~~~~~~~-~~~~~~-~~~~~~----~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~---~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 305 GTFTVCHLAAMR-YIAARP-GSEVIR----LQALYSALAMGGSIAIMTVLSGFLYQHLGA---GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHHH-HHHHCC-HhhhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHH
Confidence 998887776655 655542 112111 222222233445666777777777776543 3455555554444433
No 133
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.29 E-value=9.3e-10 Score=100.77 Aligned_cols=155 Identities=18% Similarity=0.093 Sum_probs=99.2
Q ss_pred HHHHHHHHh-hCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 58 PYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 58 ~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
.+.|.+.++ +|.++.+.|.+.+...++..+++++.+++.||.++|+.+..+.+..+++. +..+.++.....++.++.|
T Consensus 244 ~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 323 (417)
T PRK10489 244 VLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFG 323 (417)
T ss_pred HhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 346666666 89999999999888888888888899999999888888888877777766 5567788877788888899
Q ss_pred hHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 212 (360)
++.+...+.... ++.|. +.|++..+... ....+|. .+++.+.+.+.+.. +.+..+...+.+..+..
T Consensus 324 ~~~~~~~~~~~~-~~~~~~p~~~~g~~~g~~~----~~~~~g~----~~g~~l~G~l~~~~--g~~~~~~~~~~~~~~~~ 392 (417)
T PRK10489 324 YLSAISSLLQYT-LLQTQTPDEMLGRINGLWT----AQNVTGD----AIGAALLGGLGAMM--TPVASASASGFGLLIIG 392 (417)
T ss_pred HHHHHHHHHHHH-HHHhhCCHHHHHHHHHHHH----HHHhhhH----hHHHHHHHHHHHHh--chhhHHHHHHHHHHHHH
Confidence 888776555433 65554 44666433332 2333344 44444444444433 33344544444433333
Q ss_pred HHHhhhhcccc
Q 018113 213 VIILSSWTENY 223 (360)
Q Consensus 213 ~~~~~~~~~~~ 223 (360)
.......++.+
T Consensus 393 ~~~~~~~~~~~ 403 (417)
T PRK10489 393 VLLLLVLGELR 403 (417)
T ss_pred HHHHHhccccc
Confidence 33323344433
No 134
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.28 E-value=8.6e-10 Score=100.62 Aligned_cols=148 Identities=15% Similarity=0.124 Sum_probs=99.5
Q ss_pred HHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHh
Q 018113 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGI 136 (360)
Q Consensus 58 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~ 136 (360)
.+.|.+.++.|.++.+.+...+...++..++.++.|+++||+|||+.+..+.+...++. ...+.++.+.+.+..++.|+
T Consensus 241 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 320 (406)
T PRK11551 241 NWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGL 320 (406)
T ss_pred HHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 44778888899999999999988888888999999999999999999888766666655 45566777777777788888
Q ss_pred HhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHH
Q 018113 137 ATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (360)
Q Consensus 137 ~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 213 (360)
+.+...+.... +..|. ++|++..+...... .+|..+++.+.+.+.++.+ .+...+.......++..+
T Consensus 321 ~~~~~~~~~~~-~~~~~~p~~~~g~~~g~~~~~~--------~~g~~~g~~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~ 390 (406)
T PRK11551 321 FVVGGQSVLYA-LAPLFYPTQVRGTGVGAAVAVG--------RLGSMAGPLLAGQLLALGR-STVGVIGASIPVILVAAL 390 (406)
T ss_pred HHHhHHHHHHH-HHHHHcchhhhhhhhhHHHHhh--------hHHHHHHhhhHhhhhccCC-chHHHHHHHHHHHHHHHH
Confidence 77766666544 66664 45666333332222 2555666666666665422 333444444444444433
Q ss_pred HH
Q 018113 214 II 215 (360)
Q Consensus 214 ~~ 215 (360)
..
T Consensus 391 ~~ 392 (406)
T PRK11551 391 AA 392 (406)
T ss_pred HH
Confidence 33
No 135
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.27 E-value=2e-10 Score=107.61 Aligned_cols=268 Identities=14% Similarity=0.136 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHHhhhh----hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 018113 41 NYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC 116 (360)
Q Consensus 41 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 116 (360)
.++.+..+..+.+++. ...+..+.+.|+++.++.|.+.+.+-++..+...+..+...|.-|-|.+-+++++++++.
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 3444444444444444 333778888999999999998888888777777788999999999999999999888876
Q ss_pred -HHHhc--------------------c-----------------------------h--HH-HHHHHHHHHHhHhhhhhh
Q 018113 117 -ITKHS--------------------P-----------------------------Q--YK-ILMIGRILGGIATSLLFS 143 (360)
Q Consensus 117 -l~~~~--------------------~-----------------------------~--~~-~l~~~r~l~G~~~~~~~~ 143 (360)
++++- + + ++ .++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 43321 0 0 11 567789999999999999
Q ss_pred hhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc---------cCCCCchh----hhhhHHHHHH
Q 018113 144 AFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS---------FSLGPVAP----FDAAACFLAI 210 (360)
Q Consensus 144 ~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~---------~~~~~~~~----~~~~~~~~~~ 210 (360)
...+ |+-|..++....-... .......+|-++|.+++++....-.|. .+-||.-. |++.+.+.++
T Consensus 257 lGis-YiDDnvk~~~SplYlg-i~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~ 334 (735)
T KOG3626|consen 257 LGIS-YIDDNVKKKNSPLYLG-ILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLF 334 (735)
T ss_pred CCCc-cccccccccCCcHHHH-HHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHH
Confidence 9977 9998833333222222 222234445555555555444433332 12345444 4444444444
Q ss_pred HHHHHhhhhccccCCCC-------------------cchh---HHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHH
Q 018113 211 GMVIILSSWTENYGDPS-------------------ESKD---LLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVF 268 (360)
Q Consensus 211 ~~~~~~~~~~~~~~~~~-------------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (360)
..+.+ ...|++.+++. +.++ ..++.....+++++||.+....+...+-...... ..
T Consensus 335 ~a~p~-f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G-~~ 412 (735)
T KOG3626|consen 335 SAVPL-FFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITG-YI 412 (735)
T ss_pred HHHHH-HhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhh-HH
Confidence 44444 23333222110 0111 1233445677889999998876666654444444 68
Q ss_pred hhhccccCCCCCcchhHHH----HHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 269 LWTPALSPNDEEIPHGFIF----ATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
+|+|.|++++++.+++... .+...+..+|.+++|++.+|++.+.
T Consensus 413 tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~ 460 (735)
T KOG3626|consen 413 TFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSA 460 (735)
T ss_pred HhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccH
Confidence 9999999999999885322 2334456678899999999997654
No 136
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.27 E-value=1.6e-09 Score=94.76 Aligned_cols=252 Identities=14% Similarity=0.148 Sum_probs=144.3
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHH-HH-HHHhcch--HH-HHHHHHHHHHhHhhhhhhhhhhH
Q 018113 74 IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SC-ITKHSPQ--YK-ILMIGRILGGIATSLLFSAFESW 148 (360)
Q Consensus 74 ~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~-~~-l~~~~~~--~~-~l~~~r~l~G~~~~~~~~~~~~~ 148 (360)
.|...++..+...+.+|+.|.++|+.|+||..........+ +. ...++++ ++ ..++.-.+..++.........+
T Consensus 60 ~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds- 138 (438)
T COG2270 60 WGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDS- 138 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhh-
Confidence 35667777777888999999999999987776666555555 33 4455443 44 4445556667766666555544
Q ss_pred Hhhhcccc---ch------hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh------cccCCCCchhhhhhHHHHHHHHH
Q 018113 149 LVAEHNKR---GF------EQQWLSITFSKAIFLGNGLVAILSGLFGNLLV------DSFSLGPVAPFDAAACFLAIGMV 213 (360)
Q Consensus 149 ~i~~~~~r---~~------~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~------~~~~~~~~~~~~~~~~~~~~~~~ 213 (360)
++.+..++ ++ ..+...+....... ++..+.+.-.+... +..+-.-|..+.+.++-.++..+
T Consensus 139 ~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~----~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~i 214 (438)
T COG2270 139 MLPRLTTKDNMGRISGLGWALGYLGSVILLIFV----VLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFAL 214 (438)
T ss_pred HhhhhcCccccCcccccccccccccchHHHHHH----HHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHh
Confidence 55544222 22 11111111111100 01111110000000 01122334555555555444444
Q ss_pred HHhhhhccccCCC-Cc---chhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcchh---HH
Q 018113 214 IILSSWTENYGDP-SE---SKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHG---FI 286 (360)
Q Consensus 214 ~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 286 (360)
......++.+... ++ -.+..++..++.++.++++.+..+.+...+++-+... +......|..+.+|.+.. ..
T Consensus 215 Pm~~~v~~~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~t-il~~~~~fg~~~~gls~~~lll~ 293 (438)
T COG2270 215 PMILNVHDAEKISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNT-ILAMGGVFGAADLGLSSTELLLI 293 (438)
T ss_pred HHHhcccccccccccchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHH-HHHHHHHHHHHHcCccHHHHHHH
Confidence 4433333332211 11 1234566667888899999888888888888877777 466777788877787774 44
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHhHhc
Q 018113 287 FATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVT 333 (360)
Q Consensus 287 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 333 (360)
....++.+++|+++.|++.||+|.| +++..+.++..+......+.
T Consensus 294 g~~~~vvA~lg~ii~g~Ld~rfg~k--~vl~~~lvi~~~~~~~~~~~ 338 (438)
T COG2270 294 GIALSVVAALGAIIAGFLDERFGSK--PVLMIGLVILSIAALYLIFL 338 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCc--eeehHHHHHHHHHHHHHHHc
Confidence 4566888999999999999999999 45555555544444444443
No 137
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.25 E-value=7.2e-13 Score=123.29 Aligned_cols=264 Identities=13% Similarity=0.101 Sum_probs=3.0
Q ss_pred hhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHh----cc-------
Q 018113 55 LQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH----SP------- 122 (360)
Q Consensus 55 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~----~~------- 122 (360)
+....++.+.++|+++.++.|.+.+.+-++..+..++..++.+|..|-|.+-.+.++.++++ +.++ .+
T Consensus 21 ~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~ 100 (539)
T PF03137_consen 21 YVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEA 100 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccc
Confidence 33455888999999999999999999999999999999999999888888888888888876 4322 00
Q ss_pred ---------------------------------------hHHHHHHHHHHHHhHhhhhhhhhhhHHhhhcccc---chhh
Q 018113 123 ---------------------------------------QYKILMIGRILGGIATSLLFSAFESWLVAEHNKR---GFEQ 160 (360)
Q Consensus 123 ---------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r---~~~~ 160 (360)
-+..++++.++.|+|....++...+ |+-|..++ +...
T Consensus 101 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t-YiDDnv~~~~splYi 179 (539)
T PF03137_consen 101 SNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT-YIDDNVSKKNSPLYI 179 (539)
T ss_dssp ---------------------------------------------------SSS--------------------------
T ss_pred cccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee-eeccccccccCccch
Confidence 0126778999999999999999977 99997222 2223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc------------cCCCCc----hhhhhhHHHHHHHHHHHh---hhhcc
Q 018113 161 QWLSITFSKAIFLGNGLVAILSGLFGNLLVDS------------FSLGPV----APFDAAACFLAIGMVIIL---SSWTE 221 (360)
Q Consensus 161 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~------------~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~ 221 (360)
+.... ...+|.++|.++++.......|. .+-+|. .-|.+.+.+.++..+.+. ..+|+
T Consensus 180 Gi~~~----~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~ 255 (539)
T PF03137_consen 180 GILYA----MSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPG 255 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhH----HhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCC
Confidence 33332 33333334444443333221111 122333 333334433333333331 22333
Q ss_pred ccCC-------CCcch----h-------------HHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCC
Q 018113 222 NYGD-------PSESK----D-------------LLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN 277 (360)
Q Consensus 222 ~~~~-------~~~~~----~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (360)
+++. +++.+ + ..+...+..+++++||.+....+...+-.....+ ..++.|.|++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G-~~tF~pKylE~ 334 (539)
T PF03137_consen 256 TSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSG-FATFLPKYLES 334 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 3000 00000 0 0011112345688888888877666665555555 58899999999
Q ss_pred CCCcchhHHH----HHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHH
Q 018113 278 DEEIPHGFIF----ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSS 324 (360)
Q Consensus 278 ~~~~~~~~~~----~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 324 (360)
+++.+++... .+...++++|.+++|++.+|++.+.........+...
T Consensus 335 QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~ 385 (539)
T PF03137_consen 335 QFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSI 385 (539)
T ss_dssp ---------------------------------------------------
T ss_pred HhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHH
Confidence 9998874322 2334457789999999999996644233444333333
No 138
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.23 E-value=8.9e-09 Score=90.22 Aligned_cols=257 Identities=14% Similarity=0.102 Sum_probs=144.1
Q ss_pred HHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhc-----chHHHHHHHHHH-HHHH-HHH-----hcc-------h
Q 018113 63 LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG-----RKRACVTYCLTY-ILSC-ITK-----HSP-------Q 123 (360)
Q Consensus 63 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~G-----rr~~l~~~~~~~-~~~~-l~~-----~~~-------~ 123 (360)
+..|++++..-.+......++. ....+.+|+.+|+.+ ||...++...+. ..+. +.. ++. +
T Consensus 6 MIvEL~vpA~lv~~lval~~~~-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLV-APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHH-HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 4678999999999988888874 446788999999999 888777654433 3332 221 122 2
Q ss_pred HH----HHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccC-C
Q 018113 124 YK----ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS-L 195 (360)
Q Consensus 124 ~~----~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~-~ 195 (360)
.+ ...+...+.|+|.+...+...+ +++|. ++|++..++.-.+.. +|. +++..+.+.+.+.++ -
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lA-Ll~D~~~e~~R~~~v~ivw~Mli----~G~----iv~ai~~g~lL~~~s~~ 155 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLA-LLADLAPEERRPRVVAIVWVMLI----VGI----IVSAIVFGRLLDPFSPE 155 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHH-HHHhcCCHhhhhhhHHHHHHHHH----HHH----HHHHHHHHHHccccCHH
Confidence 21 3344567788888887776645 77775 667775554443333 333 333344444333221 1
Q ss_pred CCchhhhhhHHHHHHHHHHHhhhhccccCC-CC-cchhHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhcc
Q 018113 196 GPVAPFDAAACFLAIGMVIILSSWTENYGD-PS-ESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPA 273 (360)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (360)
+-.-.+.....+.....++..+. .|++.+ .+ +++++..+.++.++++..+|+...+.....+.....+. -...+-.
T Consensus 156 rL~~v~~~~a~i~~~l~~ia~wg-~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~-QD~iLEP 233 (403)
T PF03209_consen 156 RLIQVIQGVALIALLLNLIALWG-QEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFM-QDVILEP 233 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-cccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHh-hHHHcCC
Confidence 11112222222222111111111 122211 11 22333444556677888888888776655554444333 3444556
Q ss_pred ccCCCCCcchh---HHHHHHHHHHHHHHHHHHHHHhh-cCCChhhHHHHHHHHHHHHHHHhHhc
Q 018113 274 LSPNDEEIPHG---FIFATFMLASMLGSSLASRLMAR-SPPRVESYMQIVFVVSSVSLLLPIVT 333 (360)
Q Consensus 274 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~ 333 (360)
|--+.++.+.+ ........+..+|-...+++..| .+++ +....++..+..++......
T Consensus 234 ygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~--~~a~~G~~~~~~~f~lii~a 295 (403)
T PF03209_consen 234 YGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK--RTAALGCLLGALAFALIILA 295 (403)
T ss_pred chhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch--HHHHHHHHHHHHHHHHHHHH
Confidence 77778888774 34455577788888888887774 4444 45555666666555554444
No 139
>PRK15075 citrate-proton symporter; Provisional
Probab=99.23 E-value=1.4e-09 Score=100.13 Aligned_cols=134 Identities=13% Similarity=0.113 Sum_probs=83.1
Q ss_pred hHHHHHHHHh-hCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHH-HH-HH---HhcchHHHHHHH
Q 018113 57 GPYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SC-IT---KHSPQYKILMIG 130 (360)
Q Consensus 57 ~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~-~~-l~---~~~~~~~~l~~~ 130 (360)
..+.|.+.++ +|.+..+.+.......++..++.++.|+++||+|||+++..+.....+ .. .. ...++.......
T Consensus 258 ~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (434)
T PRK15075 258 TVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAV 337 (434)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHH
Confidence 4556776654 799999888887777777888888999999999999998876554432 21 11 123344444444
Q ss_pred HHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCc
Q 018113 131 RILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPV 198 (360)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~ 198 (360)
.++.|++.+...+.... ++.|. +.|+...+ ....++..++..++|.+.+++.|+.++++.
T Consensus 338 ~~~~~~~~g~~~~~~~~-~~~e~~p~~~rg~~~g-------~~~~~~~~~~g~~~p~~~g~i~~~~g~~~~ 400 (434)
T PRK15075 338 ELWLSFLYGSYNGAMVV-ALTEVMPAEVRTAGFS-------LAYSLATAIFGGFTPAISTWLIHVTGDKAA 400 (434)
T ss_pred HHHHHHHHHHHHhhHHH-HHHHHCCCCccchhee-------HHHHHHHHHHhhhHHHHHHHHHHhcCCchH
Confidence 55556666555444433 56665 45555322 223344444445567777777776665543
No 140
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.20 E-value=5e-09 Score=95.47 Aligned_cols=146 Identities=17% Similarity=0.222 Sum_probs=93.0
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHH-HHHHHHHHHH-HHH-----hcchHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACV-TYCLTYILSC-ITK-----HSPQYKILMI 129 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~-~~~~~~~~~~-l~~-----~~~~~~~l~~ 129 (360)
..+.|.+.+++|.+..+.+.......+++.++.+..|+++||+|||+.+. .+.+..+++. ... ..++.+...+
T Consensus 242 ~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (402)
T TIGR00897 242 AVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALI 321 (402)
T ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHH
Confidence 34578888899999999988888888888899999999999999988764 2333333322 211 1345666777
Q ss_pred HHHHHHhHhhhhhhhhhhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHH
Q 018113 130 GRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACF 207 (360)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 207 (360)
..++.|++.+...+. .. .+.|. ++|+...+. .+ .+..++..++|.+.+.+.+.. ++...+++.+.+
T Consensus 322 ~~~~~G~~~~~~~~~-~~-~~~~~~~~~~g~~~g~----~~----~~~~lg~~~gp~i~g~l~~~~--g~~~~~~~~a~~ 389 (402)
T TIGR00897 322 IAIALGIFLAGYVPL-AA-VFPTLAPKHKGAAMSV----LN----LSAGLSAFLAPAIAVLFIGFF--GAIGVVWIFAAL 389 (402)
T ss_pred HHHHHHHHHHHHHHH-HH-HHHhhCcchhHHHHHH----HH----HHHHHHHHHHHHHHHHHHhhc--chHHHHHHHHHH
Confidence 888889887765443 23 44554 445443222 22 233355566676667666653 455666666655
Q ss_pred HHHHHHH
Q 018113 208 LAIGMVI 214 (360)
Q Consensus 208 ~~~~~~~ 214 (360)
.++....
T Consensus 390 ~~i~~~~ 396 (402)
T TIGR00897 390 YVVSAFL 396 (402)
T ss_pred HHHHHHH
Confidence 5444433
No 141
>PRK12382 putative transporter; Provisional
Probab=99.19 E-value=3.6e-09 Score=96.07 Aligned_cols=146 Identities=21% Similarity=0.300 Sum_probs=95.2
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
..+.|...++.|.+. .+.......++..++.++.|++.||+|+||.+..+..+.+++. +..+.++.+...+..++.|
T Consensus 236 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 313 (392)
T PRK12382 236 GTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTG 313 (392)
T ss_pred HHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 345556667777654 4444555555566777889999999999999998888887776 5567788888888899999
Q ss_pred hHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 212 (360)
++.+...+.... .+.|. ++|+...+.... ... +|..+++.+.+.+.++.+| +..+...+.+.++..
T Consensus 314 ~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~----~~~----~g~~ig~~~~g~l~~~~g~--~~~~~~~~~~~~~~~ 382 (392)
T PRK12382 314 AGCSLIFPALGV-EVVKRVPSQVRGTALGGYAA----FQD----IAYGVSGPLAGMLATSFGY--PSVFLAGAISAVLGI 382 (392)
T ss_pred HHHHhHHHHHHH-HHHHhcCHHHHHHHHHHHHH----HHH----HHHHHHHHHHHHHHHHhCc--hHHHHHHHHHHHHHH
Confidence 998877776534 44443 455553333222 222 4555556666666665554 455666655555544
Q ss_pred HHH
Q 018113 213 VII 215 (360)
Q Consensus 213 ~~~ 215 (360)
...
T Consensus 383 ~~~ 385 (392)
T PRK12382 383 IVT 385 (392)
T ss_pred HHH
Confidence 443
No 142
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.17 E-value=8.2e-11 Score=96.83 Aligned_cols=242 Identities=13% Similarity=0.081 Sum_probs=134.1
Q ss_pred HHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhh-hcchHHHHHHHHHHHHHH----HHHhcchHHHHHHHHHHH
Q 018113 60 VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILSC----ITKHSPQYKILMIGRILG 134 (360)
Q Consensus 60 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~----l~~~~~~~~~l~~~r~l~ 134 (360)
-.+...|.+++.++..++++.+..-..+...++|++.|| +|-|..-++-+....++- .....+.+|++..+|++.
T Consensus 67 q~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~F 146 (459)
T KOG4686|consen 67 QIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLF 146 (459)
T ss_pred hhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheee
Confidence 444556777888888889888888888888899999996 577766555555555553 224578999999999999
Q ss_pred HhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhh----hHHH
Q 018113 135 GIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDA----AACF 207 (360)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~----~~~~ 207 (360)
|+|.-..-... ..+...+ ++-+...+...+..- +|+.+-..+.|++....-+.++-.-.....+ ....
T Consensus 147 GIGgESlAVaQ-N~yav~wFKGKELn~vfGlqlSvAR----~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~t 221 (459)
T KOG4686|consen 147 GIGGESLAVAQ-NKYAVYWFKGKELNFVFGLQLSVAR----LGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKT 221 (459)
T ss_pred ccCchhhhhhh-cceeEEEecCccccchhhHHHHHHH----hhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHH
Confidence 99866553333 3354433 444444443333332 3333333333333322221111000000000 0111
Q ss_pred HHHHHHHHh-hhhccccCCCCcchhHHHHHHH------HHHHH-hcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCC
Q 018113 208 LAIGMVIIL-SSWTENYGDPSESKDLLTQFRG------AAVAI-ASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDE 279 (360)
Q Consensus 208 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (360)
+....+... ..+.+++. ++...+... ...++ --.|++|.+.....++....+- .....|.++++.+
T Consensus 222 c~~slical~lg~~D~rA-----erilh~e~g~~Ge~pkLtdv~~f~ppfw~~~iicv~yyva~fP-Fi~lg~~fF~~rf 295 (459)
T KOG4686|consen 222 CKQSLICALSLGLSDDRA-----ERILHLEEGFLGEEPKLTDVNTFYPPFWVLVIICVLYYVAWFP-FITLGPMFFQKRF 295 (459)
T ss_pred HHHHHHHHHHhhhhhhHH-----HHHHhhhcCcccCCcccccccccCccHHHHHHHHHHHHHHHHH-HhhhhHHHHHHhh
Confidence 111111110 11111111 100000000 00011 1237788877766666666655 3566788889988
Q ss_pred Ccch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 280 EIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 280 ~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
+.++ +.+.+.....+.+.+++.|.++||.|++.
T Consensus 296 GlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~ 331 (459)
T KOG4686|consen 296 GLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL 331 (459)
T ss_pred CCChhhccchhhhhhhhhhhhhhhHHHhHhhhccee
Confidence 8877 45556666667788899999999999984
No 143
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.17 E-value=2.3e-10 Score=87.48 Aligned_cols=123 Identities=24% Similarity=0.380 Sum_probs=84.3
Q ss_pred HHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccc
Q 018113 82 FGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRG 157 (360)
Q Consensus 82 ~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~ 157 (360)
.++..+.+++.|++.||+|||+.+..+.....++. .....++++.+.+.+++.|++.+...+.... ++.|. ++|+
T Consensus 8 ~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~ 86 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAA-LIADIYPPEERG 86 (141)
T ss_pred hhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHCChhhhh
Confidence 45566778889999999999999999988888876 6677789999999999999999888777645 66665 4455
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHH
Q 018113 158 FEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (360)
Q Consensus 158 ~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (360)
+..+.... +..++..+++.+.+.+.+..+ |+..+........+.....
T Consensus 87 ~~~~~~~~--------~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 134 (141)
T TIGR00880 87 VALGLMSA--------GIALGPLLGPPLGGVLAQFLG--WRAPFLFLAILALAAFILL 134 (141)
T ss_pred HHHHHHHH--------hHHHHHHHhHHhHHHHhcccc--hHHHHHHHHHHHHHHHHHH
Confidence 53333322 222455555555555555444 4455666555554444444
No 144
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.17 E-value=1e-08 Score=92.69 Aligned_cols=143 Identities=13% Similarity=0.022 Sum_probs=88.5
Q ss_pred HHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HH-HhcchHHHHHHHHHHHHhH
Q 018113 60 VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT-KHSPQYKILMIGRILGGIA 137 (360)
Q Consensus 60 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~-~~~~~~~~l~~~r~l~G~~ 137 (360)
.|.+.+++|.++.+.+...+...++..++.++.|++.||+|+|+.+..+..+.+++. +. ...++.+...+..++.+.+
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g 302 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAG 302 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 345556689999999999998888889999999999999999999998888777765 33 3345555666666666766
Q ss_pred hhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHH
Q 018113 138 TSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (360)
Q Consensus 138 ~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 210 (360)
.....+........+. .+++..+.. ... ....+|..++|.+++.+.|.. .+++..+...+.+..+
T Consensus 303 ~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~----~~~~~g~~~Gp~~~G~l~~~~-~~~~~~~~~~~~~~~~ 367 (382)
T PRK10091 303 LFALSAPLQILLLQNA-KGGELLGAA--GGQ----IAFNLGSAIGAYCGGMMLTLG-LAYNYVALPAALLSFA 367 (382)
T ss_pred HHhhhHHHHHHHHHhC-CcchHHHHH--HHH----HHHHHHHHHHHHHhHHHHHcc-cCcchHHHHHHHHHHH
Confidence 5554443323223322 111211111 111 223466677777777766632 2344555554444333
No 145
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.16 E-value=1.7e-09 Score=98.01 Aligned_cols=130 Identities=13% Similarity=0.164 Sum_probs=88.3
Q ss_pred hHHHHHHH-HhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHH-HH--HHHh--cchHHHHHHH
Q 018113 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SC--ITKH--SPQYKILMIG 130 (360)
Q Consensus 57 ~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~-~~--l~~~--~~~~~~l~~~ 130 (360)
..+.|.+. +++|.++.+.+.......+...++.++.|+++||+|||+.+.....+..+ +. ...+ .++.+.+...
T Consensus 239 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (394)
T TIGR00883 239 TTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFL 318 (394)
T ss_pred HHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 45566665 67899999999888888888888889999999999999987765544433 32 2222 2456666777
Q ss_pred HHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccC
Q 018113 131 RILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (360)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~ 194 (360)
.++.|++.+...+.... ++.|. ++|+...+. ....+..+|..++|.+++.+.++.+
T Consensus 319 ~~~~g~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~-------~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 319 VLGLALIGGMYTGPMGS-FLPELFPTEVRYTGASL-------AYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HHHHHHHHHHHhhhHHH-HHHHhCCccceeeEeee-------hhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 88888888777777645 77775 445553322 1223344555666777777666555
No 146
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.16 E-value=1.5e-08 Score=92.01 Aligned_cols=155 Identities=14% Similarity=0.068 Sum_probs=88.4
Q ss_pred HHHHHhhhhhHHHHHHHHhhCCChhhhHHHHHHHHH-HHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-H-HHh----
Q 018113 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFG-SSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-I-TKH---- 120 (360)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l-~~~---- 120 (360)
+....+.....+.+...+|.|++++++|.+...... ...++..+.|++.||+|+|+.+..+....++.. . ...
T Consensus 219 l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 298 (390)
T TIGR02718 219 LSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFW 298 (390)
T ss_pred HHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 333333333445666677899999999998777654 444556789999999999999988776653322 1 111
Q ss_pred -cchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc----cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCC
Q 018113 121 -SPQYKILMIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL 195 (360)
Q Consensus 121 -~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~ 195 (360)
.++...+.....+.++..+...+...+ ...+. ++++...+..+. ... +|..+++.+++.+.|..|
T Consensus 299 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~----~~~----lg~~~g~~~~G~l~~~~G- 368 (390)
T TIGR02718 299 LAPGIAVAWSCSAFGSLITGITSVAIYT-AFMRFAGDGDQAGTDVTAVQS----TRD----LGELIASSIAGYLTDRFG- 368 (390)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCcccchHHHHHHHHH----HHH----HHHHHHHHHHHHHHHHHc-
Confidence 233334444455555555655554434 33222 233443222222 223 455566666666666544
Q ss_pred CCchhhhhhHHHHHHHHH
Q 018113 196 GPVAPFDAAACFLAIGMV 213 (360)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~ 213 (360)
++..|...+.+.++...
T Consensus 369 -~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 369 -YAGGFLSGTVLAVLAIL 385 (390)
T ss_pred -cHHHHHHHHHHHHHHHH
Confidence 44566666555554443
No 147
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.16 E-value=8.8e-09 Score=91.64 Aligned_cols=148 Identities=23% Similarity=0.297 Sum_probs=108.0
Q ss_pred hHHHHHHHHhh-CCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchH-HHHHHHHHHHHHH-HHHhcchHHHHHHHHHH
Q 018113 57 GPYVYYLYSTY-GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKR-ACVTYCLTYILSC-ITKHSPQYKILMIGRIL 133 (360)
Q Consensus 57 ~~~~~~~~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~-~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l 133 (360)
..+.|.+.++. |.++.+.+.......++..++.++.|++.||+|||+ .+..+..+..++. .....++.+...+..++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 274 (352)
T cd06174 195 LTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLL 274 (352)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 45566666664 999999999999999999999999999999999999 9999988888877 66777888888999999
Q ss_pred HHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHH
Q 018113 134 GGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (360)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 210 (360)
.|++.+...+.... ++.|. ++|++..+. .+.. ..++..+++.+.+.+.+.. +|+..+.+.+.+.++
T Consensus 275 ~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~----~~~~~~i~~~i~g~l~~~~--~~~~~~~~~~~~~~i 343 (352)
T cd06174 275 LGFGLGFAFPALLT-LASELAPPEARGTASGL----FNTF----GSLGGALGPLLAGLLLDTG--GYGGVFLILAALALL 343 (352)
T ss_pred HHHHHhccchhHHH-HHHhhcCHHHHHHHHHH----HHHH----HHHHHHHHHHHHHHHhccc--CcchHHHHHHHHHHH
Confidence 99999988887755 76765 445553322 2222 2255556666666655543 455666666666655
Q ss_pred HHHHH
Q 018113 211 GMVII 215 (360)
Q Consensus 211 ~~~~~ 215 (360)
..+..
T Consensus 344 ~~i~~ 348 (352)
T cd06174 344 AALLL 348 (352)
T ss_pred HHHHh
Confidence 54443
No 148
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.15 E-value=5.7e-08 Score=90.72 Aligned_cols=148 Identities=14% Similarity=0.174 Sum_probs=84.3
Q ss_pred HHHHHHhhCCChhhhHHHH-HHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH----HHHhc-chHHHHHHHHHH
Q 018113 60 VYYLYSTYGFGKGEIGQLF-IAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC----ITKHS-PQYKILMIGRIL 133 (360)
Q Consensus 60 ~~~~~~~~g~s~~~~g~~~-~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~----l~~~~-~~~~~l~~~r~l 133 (360)
.|.+.+++|.|.++.+... ....++..++.++.|+++||+|+|+.+..+.+..+++. ..+.. ++...+...-++
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l 325 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFF 325 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 4455667999999999987 46667788888899999999999998877665544432 12333 344444444455
Q ss_pred HHhHhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHH
Q 018113 134 GGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (360)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 213 (360)
..+..+...+...+ +..+..++..... ..+..+.. ..+|..+++.+.+.+.+..| |+..|.+..++.+.+.+
T Consensus 326 ~~~~~g~~~~~~~a-~~~~l~~~~~~~t-~~gl~~s~----~~lg~~~~~~~~G~l~~~~G--~~~~f~~~~~~~l~~l~ 397 (491)
T PRK11010 326 ENLCGGMGTAAFVA-LLMTLCNKSFSAT-QFALLSAL----SAVGRVYVGPVAGWFVEAHG--WPTFYLFSVAAAVPGLL 397 (491)
T ss_pred HHHHHHHHHHHHHH-HHHHHcCCCCcHH-HHHHHHHH----HHHHHHHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHH
Confidence 44333333333322 4344311212111 22222222 23555566666777776554 55666666666655544
Q ss_pred HH
Q 018113 214 II 215 (360)
Q Consensus 214 ~~ 215 (360)
..
T Consensus 398 ~~ 399 (491)
T PRK11010 398 LL 399 (491)
T ss_pred HH
Confidence 44
No 149
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.15 E-value=1e-08 Score=94.38 Aligned_cols=181 Identities=15% Similarity=0.144 Sum_probs=120.2
Q ss_pred hhHHHHHHHHHHHHHhhhhhHH---HHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcch--HHHHHHHHHH
Q 018113 38 FKNNYLLVYSLMMAGDWLQGPY---VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRK--RACVTYCLTY 112 (360)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr--~~l~~~~~~~ 112 (360)
++.....+.......|++.+.. ..+..+++|++..+...+.....+.+.+++.++|++.||+|.| +++..+.+.+
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILW 359 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 3333334444444556666322 4445568999999999888888888999999999999999999 8988888877
Q ss_pred HHHH-HHHh--------cchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHh
Q 018113 113 ILSC-ITKH--------SPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSG 183 (360)
Q Consensus 113 ~~~~-l~~~--------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~ 183 (360)
.+.. ...+ .++.+.+.+.-++.|+..|..++...+ +.+|.-++++... ..+.+. ..|- ....++|
T Consensus 360 ~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs-~~~~LiP~g~e~e-fFgly~---i~gk-~ss~lGP 433 (477)
T PF11700_consen 360 IIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRS-LFSRLIPPGREAE-FFGLYA---ITGK-ASSWLGP 433 (477)
T ss_pred HHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHH-HHHHhCCCchhhH-HHHHHH---HHHH-HHHHHHH
Confidence 5533 2222 567788899999999999999999977 8787744444322 222333 2232 4456666
Q ss_pred hhhhhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCC
Q 018113 184 LFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP 226 (360)
Q Consensus 184 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (360)
.+.+.+.+..+ +.|..+....++.++..++. .+.+++++++
T Consensus 434 ll~g~i~~~tg-~~r~g~~~l~~lf~~gl~ll-~~v~~~~g~~ 474 (477)
T PF11700_consen 434 LLFGLITDATG-SQRYGFLFLLVLFLIGLILL-FFVDVEKGRE 474 (477)
T ss_pred HHHHHHHHHhC-CchhHHHHHHHHHHHHHHHH-hhccchhhhh
Confidence 66666555443 34566666666666666655 4555554443
No 150
>PRK10504 putative transporter; Provisional
Probab=99.13 E-value=1.1e-08 Score=95.26 Aligned_cols=123 Identities=22% Similarity=0.230 Sum_probs=80.6
Q ss_pred HHHHHHHH-hhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhc---chHHHHHHHHH
Q 018113 58 PYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS---PQYKILMIGRI 132 (360)
Q Consensus 58 ~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~---~~~~~l~~~r~ 132 (360)
.+.|++.+ .+|.++.+.+.......++..+..++.|++.||+|||+++..+....+++. +..+. ++.+.+.+..+
T Consensus 282 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (471)
T PRK10504 282 FMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLF 361 (471)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHH
Confidence 34666655 589999999988887777777777899999999999999998888777754 43332 33344455567
Q ss_pred HHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 018113 133 LGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (360)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 185 (360)
+.|++.+..++.... +..+. ++|+...+... ....+|..+|+.+++.+
T Consensus 362 ~~g~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~----~~~~~g~~ig~~i~g~l 412 (471)
T PRK10504 362 LQGMVNSTRFSSMNT-LTLKDLPDNLASSGNSLLS----MIMQLSMSIGVTIAGLL 412 (471)
T ss_pred HHHHHHHHHHHHHHH-HHHHcCCHHhccchHHHHH----HHHHHHHHHHHHHHHHH
Confidence 778877777666544 44443 45666444433 33344444444444433
No 151
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.11 E-value=4.9e-09 Score=97.43 Aligned_cols=149 Identities=11% Similarity=0.018 Sum_probs=90.4
Q ss_pred HHHHH-HHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-H--HHhcchHHHHHHHHHH
Q 018113 58 PYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-I--TKHSPQYKILMIGRIL 133 (360)
Q Consensus 58 ~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l--~~~~~~~~~l~~~r~l 133 (360)
.+.|. +.+++|+|..+.+...+...++..++.++.|+++||+|||+.+........++. + ....++.....+.+++
T Consensus 279 ~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (467)
T PRK09556 279 NWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFA 358 (467)
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 44664 456799999999998888888888999999999999999988766554444332 2 2334566666677888
Q ss_pred HHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc----------cCCCCchh
Q 018113 134 GGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS----------FSLGPVAP 200 (360)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~----------~~~~~~~~ 200 (360)
.|+......... .....|. +.|+. ..+.....++..|..++|.+.+.+.|. ...+|+..
T Consensus 359 ~G~~~~~~~~~~-~~~~~~~~p~~~~g~-------a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~ 430 (467)
T PRK09556 359 LGFLVFGPQLLI-GVAAVGFVPKKAIGV-------ANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGT 430 (467)
T ss_pred HHHHHhhHHHHH-HHHHHhhcchhhHHH-------HHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHH
Confidence 886433322221 1244454 34444 333333344434556667777776660 01235566
Q ss_pred hhhhHHHHHHHHHH
Q 018113 201 FDAAACFLAIGMVI 214 (360)
Q Consensus 201 ~~~~~~~~~~~~~~ 214 (360)
|....+..+++.+.
T Consensus 431 f~~~~~~~~~~~~~ 444 (467)
T PRK09556 431 FAALDIAAIGCICL 444 (467)
T ss_pred HHHHHHHHHHHHHH
Confidence 66655555544333
No 152
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.11 E-value=4.5e-09 Score=101.28 Aligned_cols=134 Identities=21% Similarity=0.167 Sum_probs=90.5
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---
Q 018113 78 FIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH--- 153 (360)
Q Consensus 78 ~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~--- 153 (360)
.....++..++.++.|+++||+|||++++.+.++.+++. +.++.++...+++.+++.|+..+..++.... +++|.
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a-~~aEl~Pt 679 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDV-LTVELYPS 679 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCH
Confidence 334456667778899999999999999999999888876 6677787778888888888887777776644 78886
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccC
Q 018113 154 NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYG 224 (360)
Q Consensus 154 ~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (360)
+.|+...+..... + .+|.+++|.+++.+.+. ....++.+.+++.+++.++. ..+||+++
T Consensus 680 ~~Rgta~Gi~~~~-------~-rlGaiigp~i~g~L~~~---~~~~pf~i~a~~lll~~ll~-~~LPET~~ 738 (742)
T TIGR01299 680 DKRATAFGFLNAL-------C-KAAAVLGILIFGSFVGI---TKAAPILFASAALACGGLLA-LKLPDTRG 738 (742)
T ss_pred HHHHHHHHHHHHH-------H-HHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHH-HhCCCCcc
Confidence 5566633333222 2 25666666666555432 23356666665555555544 45576554
No 153
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.11 E-value=3.6e-09 Score=97.86 Aligned_cols=146 Identities=12% Similarity=0.024 Sum_probs=94.9
Q ss_pred HHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhh--cchHHHHHHH--HHHHHHH-HHHhcchHHHHHHHHH
Q 018113 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ--GRKRACVTYC--LTYILSC-ITKHSPQYKILMIGRI 132 (360)
Q Consensus 58 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~--Grr~~l~~~~--~~~~~~~-l~~~~~~~~~l~~~r~ 132 (360)
.++|.+.+++|.+..+.+...+...++..++.++.|+++||. ++|+....+. +..+++. +....++++.+++.++
T Consensus 262 ~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~ 341 (455)
T TIGR00892 262 IFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCI 341 (455)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 456777788999999999999988888888888999999973 4444443333 3333344 4466788888889999
Q ss_pred HHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHH
Q 018113 133 LGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLA 209 (360)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 209 (360)
+.|++.+...+...+ ++.|. ++++...+. ++ ....+|..++|.+++.+.+..+ +|+..|...+++.+
T Consensus 342 ~~G~~~g~~~~~~~~-~~~~~~~~~~~g~~~g~----~~----~~~~lg~~igp~i~G~l~~~~g-~~~~~f~~~~~~~l 411 (455)
T TIGR00892 342 FFGLSFGSVGALLFE-VLMDLVGAQRFSSAVGL----VT----IVECCAVLIGPPLAGRLVDATK-NYKYIFYASGSIVV 411 (455)
T ss_pred HHHHHhchHHHHHHH-HHHHHhhHHHHhhHHhH----HH----HHHHHHHHccccceeeeehhcC-CcchHHHHhhHHHH
Confidence 999998887776645 66654 344443222 22 2233566777777776666442 24455655544444
Q ss_pred HHHH
Q 018113 210 IGMV 213 (360)
Q Consensus 210 ~~~~ 213 (360)
+..+
T Consensus 412 i~~~ 415 (455)
T TIGR00892 412 SAGL 415 (455)
T ss_pred HHHH
Confidence 4333
No 154
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.10 E-value=1.2e-08 Score=91.31 Aligned_cols=125 Identities=14% Similarity=0.076 Sum_probs=89.2
Q ss_pred HHHHHHHHh-hCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcch-HHHHHHHHHHH
Q 018113 58 PYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQ-YKILMIGRILG 134 (360)
Q Consensus 58 ~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~-~~~l~~~r~l~ 134 (360)
...|.+.++ +|.++.+.+.......++..++.++.|++.||+|||+.+..+....+++. ...+.++ .+.+.+..++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAI 311 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Confidence 446777665 89999999999888888888888899999999999999888877766665 5555554 77888889999
Q ss_pred HhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 018113 135 GIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD 191 (360)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~ 191 (360)
|++.+...+.... ++.|. ++|+...+.... ... ++..+++.+.+.+.|
T Consensus 312 g~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~----~~~----~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 312 GVGYGPINVPQGT-LLQRRVPAELLGRVFGAQFS----LSH----AAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHHHH-HHHHhCCHHHHHHHHHHHHH----HHH----HHHHHHHHHHHHHHH
Confidence 9999888777645 66665 445553333222 222 444455555554444
No 155
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.07 E-value=8.1e-08 Score=87.67 Aligned_cols=125 Identities=12% Similarity=0.032 Sum_probs=80.6
Q ss_pred HHHH-HHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHh-----cchHHHHHHHHH
Q 018113 60 VYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH-----SPQYKILMIGRI 132 (360)
Q Consensus 60 ~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~-----~~~~~~l~~~r~ 132 (360)
.|.+ .+++|.++.+.+........+..++.++.|+++||+|+|+.+..+.+...++. +... .++.+.+.+..+
T Consensus 238 ~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
T PRK15402 238 SPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLS 317 (406)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHH
Confidence 4444 46789999999888777777677788899999999999999988877776655 3332 235666777888
Q ss_pred HHHhHhhhhhhhhhhHH-hhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc
Q 018113 133 LGGIATSLLFSAFESWL-VAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS 192 (360)
Q Consensus 133 l~G~~~~~~~~~~~~~~-i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~ 192 (360)
+.|++.+...+...... ..+.++|++..+ ..+.....+. .+++.+.+.+.+.
T Consensus 318 ~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~----~~g~~~~~~l~~~ 370 (406)
T PRK15402 318 LYAFGIGLANAGLYRLTLFSSDVSKGTVSA----AMGMLSMLIF----TVGIELSKHAYLG 370 (406)
T ss_pred HHHHHHHHHhhhHHHHHhhhccccccHHHH----HHHHHHHHHH----HHHHHHHHhcccC
Confidence 89998887765543311 122256666333 3333333344 4444444544443
No 156
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.06 E-value=2.9e-08 Score=90.24 Aligned_cols=138 Identities=12% Similarity=0.114 Sum_probs=91.6
Q ss_pred CCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhh
Q 018113 68 GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFE 146 (360)
Q Consensus 68 g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 146 (360)
+.+..+.|...+...+...+.....|++.||+|||+.+.++..+.+++. +...+++.+.+...+++.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556677888888877777888889999999999999999888888866 556788888888889999988665544332
Q ss_pred hHHhhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHH
Q 018113 147 SWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (360)
Q Consensus 147 ~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 213 (360)
. +..+. ++|.... ..+.+......+|..+++.+++++.|.. +++..|...+.+..+..+
T Consensus 330 ~-~~~~~~~~~~~at-----~~~~~~~~~~~lg~~~~~~l~G~l~~~~--G~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 330 K-YITSQFDVRLSAT-----IYLIGFQFAKQLAMIFLSTLAGNMYDSI--GFQGAYLVLGCIVLLFTL 389 (396)
T ss_pred H-HHHHhCCcceEEE-----eehHHHHHHHHHHHHHHHHhHHHHHHhc--ccHHHHHHHHHHHHHHHH
Confidence 2 44433 3332211 1111122334466677777777777654 455667666555544433
No 157
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.06 E-value=7.7e-08 Score=87.38 Aligned_cols=80 Identities=18% Similarity=0.145 Sum_probs=58.5
Q ss_pred HHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhh
Q 018113 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSL 140 (360)
Q Consensus 62 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~ 140 (360)
...+++|.++.+.+.......+...++.++.|++.||+|||+.+..+..+..++. +..+.++.+.....-.+.+.+.+.
T Consensus 229 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 308 (392)
T PRK10473 229 LLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSV 308 (392)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456789999999988888888888888899999999999999999888777766 445544444444444444444443
Q ss_pred h
Q 018113 141 L 141 (360)
Q Consensus 141 ~ 141 (360)
.
T Consensus 309 ~ 309 (392)
T PRK10473 309 G 309 (392)
T ss_pred H
Confidence 3
No 158
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.06 E-value=6.1e-08 Score=89.20 Aligned_cols=58 Identities=22% Similarity=0.335 Sum_probs=45.4
Q ss_pred hHHHHHHH-HhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL 114 (360)
Q Consensus 57 ~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~ 114 (360)
..++|.+. +++|.+..+.+...+.......+++++.|+++||+|||+.+..+.++.++
T Consensus 263 ~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~ 321 (432)
T PRK10406 263 TTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAAL 321 (432)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHH
Confidence 34566655 56899998998888887777888888899999999999988776654433
No 159
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.05 E-value=7.6e-08 Score=87.42 Aligned_cols=140 Identities=11% Similarity=0.103 Sum_probs=88.1
Q ss_pred HHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHH-HH-HHHhcchHHHHHHHHHHHHhH
Q 018113 60 VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SC-ITKHSPQYKILMIGRILGGIA 137 (360)
Q Consensus 60 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~-~~-l~~~~~~~~~l~~~r~l~G~~ 137 (360)
.|.+.+++|.+..+.+.......+++.+++.+.|++.||.+ |+.+..+.....+ .. +....++.+.+....++.|++
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~ 318 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLT 318 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 46677889999999999888888888888889999999964 4444444444333 34 334556777777888999999
Q ss_pred hhhhhhhhhhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHH
Q 018113 138 TSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (360)
Q Consensus 138 ~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 211 (360)
.+...+.... .+.+. +++++..+. ..... .+|..+++.+++.+.|..+ .+..+...+.+.++.
T Consensus 319 ~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~----~lg~~~G~~l~G~l~~~~g--~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 319 FALVPVGWST-WITRSLADQAEKAGSI----QVAVI----QLANTCGAAIGGYALDNIG--LTSPLMLSGTLMLLT 383 (394)
T ss_pred HHhhhHHHHH-HHHHHCcccHHHHHHH----HHHHH----HHHHHHHHHHHHHHHhccC--hhhHHHHHHHHHHHH
Confidence 8887776644 55543 222332222 22222 2455666666666666543 445555554444333
No 160
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.05 E-value=1.3e-08 Score=93.79 Aligned_cols=83 Identities=17% Similarity=0.155 Sum_probs=62.5
Q ss_pred ChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhc-chHHHHHHHHHHHHhHhhhhhhhhhh
Q 018113 70 GKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS-PQYKILMIGRILGGIATSLLFSAFES 147 (360)
Q Consensus 70 s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~ 147 (360)
++.+.+.......++..++.++.++++||+|+|+++..+..+.+++. ...+. ++.+.+.+..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777777778788888899999999999999999988777766 44443 45666777788888888887776644
Q ss_pred HHhhhc
Q 018113 148 WLVAEH 153 (360)
Q Consensus 148 ~~i~~~ 153 (360)
+++|.
T Consensus 335 -~~~~~ 339 (437)
T TIGR00792 335 -LVADT 339 (437)
T ss_pred -HHhhh
Confidence 65553
No 161
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.04 E-value=2.6e-08 Score=92.92 Aligned_cols=159 Identities=14% Similarity=0.096 Sum_probs=92.8
Q ss_pred HHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhc---chHH-HHHHHHHH
Q 018113 59 YVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS---PQYK-ILMIGRIL 133 (360)
Q Consensus 59 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~---~~~~-~l~~~r~l 133 (360)
+.|.+.++.|.+..+.+.......+...++.++.|+++||+|||+.++.+.+..+++. +.+.. +... ....+.++
T Consensus 293 ~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~ 372 (479)
T PRK10077 293 YAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLF 372 (479)
T ss_pred HHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence 3688888999887766666666666677888899999999999999999988887765 33221 1111 22233344
Q ss_pred HHhHhhhhh-hhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhh--hhhhcccCCCCchhhhhhHHH
Q 018113 134 GGIATSLLF-SAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG--NLLVDSFSLGPVAPFDAAACF 207 (360)
Q Consensus 134 ~G~~~~~~~-~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~--~~l~~~~~~~~~~~~~~~~~~ 207 (360)
.+.+.+... +.. ..++.|. ++|+...+...... .+|..+++.+.|.+. +++.+. ++++..|+..+.+
T Consensus 373 ~~~~~~~~~~~~~-~~~~~e~~p~~~r~~~~g~~~~~~----~~g~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~~~ 445 (479)
T PRK10077 373 YVAAFAMSWGPVC-WVLLSEIFPNAIRGKALAIAVAAQ----WIANYFVSWTFPMMDKNSWLVAH--FHNGFSYWIYGCM 445 (479)
T ss_pred HHHHHhccccchh-HHHhHhhCChhHHHHHHHHHHHHH----HHHHHHHHHHhHHHHhccchhhh--ccCccHHHHHHHH
Confidence 444444322 333 3367776 45666444433333 344444444445444 333343 3445566666555
Q ss_pred HHHHHHHHhhhhccccC
Q 018113 208 LAIGMVIILSSWTENYG 224 (360)
Q Consensus 208 ~~~~~~~~~~~~~~~~~ 224 (360)
.++..+......||+++
T Consensus 446 ~~~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 446 GVLAALFMWKFVPETKG 462 (479)
T ss_pred HHHHHHHHHhccccCCC
Confidence 55555555344555543
No 162
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.01 E-value=2.7e-08 Score=88.63 Aligned_cols=146 Identities=11% Similarity=0.094 Sum_probs=104.4
Q ss_pred ChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhH
Q 018113 70 GKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESW 148 (360)
Q Consensus 70 s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 148 (360)
++...|.+.+...+.-.+.-.+..++.+|+|.|+.++++....++=. +++++++.+.+...+.+.|+-.+........
T Consensus 257 g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fk- 335 (412)
T PF01306_consen 257 GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFK- 335 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 34556777777777666666678999999999999999999988866 8899999999999999999999988888867
Q ss_pred HhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccc
Q 018113 149 LVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTEN 222 (360)
Q Consensus 149 ~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (360)
|+++..++.. ....+..+..++..+|..+.+.+++.+.|+.|. +..|++.+.+.+...++....++++
T Consensus 336 YI~~~fd~rl----sAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~--~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 336 YITAHFDKRL----SATLYLVGFQFAKQIGIIILSPLAGYLYDRIGF--QHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHS-GGG----HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHHhCCHhH----HHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCc--HHHHHHHHHHHHHHHHHheeeecCC
Confidence 8887622222 334555566677778888888888888887554 3556666666555555543444433
No 163
>PRK09848 glucuronide transporter; Provisional
Probab=99.01 E-value=2.9e-08 Score=91.86 Aligned_cols=119 Identities=9% Similarity=0.055 Sum_probs=76.2
Q ss_pred HhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhc--chHHHHHHHHHHHHhHhhhh
Q 018113 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS--PQYKILMIGRILGGIATSLL 141 (360)
Q Consensus 65 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~--~~~~~l~~~r~l~G~~~~~~ 141 (360)
+.+|.++...+.......++..++.++.+++.||+|+|+++..+.++..++. +..+. ++.+.+.+..++.|+|.+..
T Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~ 336 (448)
T PRK09848 257 YVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVT 336 (448)
T ss_pred eecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHH
Confidence 3467655544444444455566778899999999999999999988877766 44443 35666677788899998888
Q ss_pred hhhhhhHHhhhc---cc--cc-hhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 018113 142 FSAFESWLVAEH---NK--RG-FEQQWLSITFSKAIFLGNGLVAILSGL 184 (360)
Q Consensus 142 ~~~~~~~~i~~~---~~--r~-~~~~~~~~~~~~~~~~g~~~g~~~~~~ 184 (360)
.+...+ +.+|. ++ +| +..+...+..+....+|.++|..+.+.
T Consensus 337 ~~~~~a-l~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 337 MTVMWA-LEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred HHHHHH-HHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777655 55543 11 11 222334445555555555555555443
No 164
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.99 E-value=3e-08 Score=92.25 Aligned_cols=155 Identities=13% Similarity=0.063 Sum_probs=91.3
Q ss_pred HHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHH---h--cc------hHH
Q 018113 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK---H--SP------QYK 125 (360)
Q Consensus 58 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~---~--~~------~~~ 125 (360)
.+.|.+.+++|.+..+.+.......+...++.++.|+++||+|||+.+..+.++.+++. +.. . .+ +..
T Consensus 305 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (481)
T TIGR00879 305 YYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNV 384 (481)
T ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHH
Confidence 44788888999999888888888888888888899999999999999998877776655 333 1 12 222
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhh
Q 018113 126 ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFD 202 (360)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~ 202 (360)
.+....+..+.......+.. ..++.|. ++|+...+.. ... ..+|..+++.+.+.+.+..+|+ ..|+
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~----~~~----~~lg~~i~~~~~~~~~~~~~~~--~~f~ 453 (481)
T TIGR00879 385 AIVFILLFIAFFAMGWGPVP-WVIVSEIFPLSLRPKGISIA----VAA----NWLANFIVGFLFPTMLESIGVG--GVFI 453 (481)
T ss_pred HHHHHHHHHHHHHccccCee-hhhhhccCChHHHHHHHHHH----HHH----HHHHHHHHHHHHHHHHHhcCcc--ceeh
Confidence 22222222222222222333 3355665 3455533222 222 2255566666666655554544 5566
Q ss_pred hhHHHHHHHHHHHhhhhcccc
Q 018113 203 AAACFLAIGMVIILSSWTENY 223 (360)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~ 223 (360)
+.+.+.++..+......||++
T Consensus 454 ~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 454 FFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred hHHHHHHHHHHHHheecccCC
Confidence 666655555555534445544
No 165
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.97 E-value=3e-08 Score=93.03 Aligned_cols=130 Identities=14% Similarity=0.108 Sum_probs=82.0
Q ss_pred HHHHHHH-HhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHh--cchHHHHHHHHHH
Q 018113 58 PYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH--SPQYKILMIGRIL 133 (360)
Q Consensus 58 ~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~--~~~~~~l~~~r~l 133 (360)
.++|.+. +++|.+..+.+.+.+...++..++.++.|+++||+|||+++..+..+..+.. +... .++.+......++
T Consensus 296 ~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (496)
T PRK03893 296 ALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFF 375 (496)
T ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHH
Confidence 3466666 5899999999999999999899999999999999999999888876666544 2222 2333444444444
Q ss_pred HHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCC
Q 018113 134 GGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLG 196 (360)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~ 196 (360)
.+.......+.. +.++.|. ++|+...+...... .+|..++|.+++.+.+..+++
T Consensus 376 ~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~--------~~g~~lgp~l~g~l~~~~g~~ 432 (496)
T PRK03893 376 QQMLGQGISGLL-PKLIGGYFDTEQRAAGLGFTYNVG--------ALGGALAPILGALIAQRLDLG 432 (496)
T ss_pred HHHHhcccchhh-HHHHHhhCCHHHhhcccchhhhhh--------hHHHHHHHHHHHHHhccCChH
Confidence 443332333333 3355554 45666433322222 255566666666666655544
No 166
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.97 E-value=2.9e-07 Score=83.94 Aligned_cols=144 Identities=14% Similarity=0.188 Sum_probs=84.2
Q ss_pred HHHHHHhhCCChhhhHHHHHHH-HHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH----HHHhc-chHHHHHHHHH-
Q 018113 60 VYYLYSTYGFGKGEIGQLFIAG-FGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC----ITKHS-PQYKILMIGRI- 132 (360)
Q Consensus 60 ~~~~~~~~g~s~~~~g~~~~~~-~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~----l~~~~-~~~~~l~~~r~- 132 (360)
.+.+.+++|+++++.+.+.... ..+..++.++.|++.||+|+|+.+..+.....+.. ..++. ++.+.+...-+
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 312 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGI 312 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 3456677999999999887554 44566777889999999999998877776655543 22343 45555554443
Q ss_pred ---HHHhHhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHH
Q 018113 133 ---LGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLA 209 (360)
Q Consensus 133 ---l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 209 (360)
..|++.+...+.... ++.+..+ +.. .+..+.... ++...++.+++.+.|..| |+..|...+.+.+
T Consensus 313 ~~~~~g~~~~~~~~~~~~-~~~~~~~-~~~----~~~~~~~~~----l~~~~~~~~~G~l~~~~G--~~~~f~~~~~~~~ 380 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMA-LCNRSFS-ATQ----YALLSALAS----VGRVYVGPTSGYLVEAYG--WPGFYLMTVVIAL 380 (402)
T ss_pred HHHHHHHHHHHHHHHHHH-hcCCCCc-HHH----HHHHHHHHH----HHHHHHHHHHHHHHHHhC--hHHHHHHHHHHHH
Confidence 445555555444423 4444311 111 111221222 333434446666666644 5566777776666
Q ss_pred HHHHHH
Q 018113 210 IGMVII 215 (360)
Q Consensus 210 ~~~~~~ 215 (360)
+..++.
T Consensus 381 ~~~~~~ 386 (402)
T PRK11902 381 PGLALL 386 (402)
T ss_pred HHHHHH
Confidence 665554
No 167
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.97 E-value=1.9e-07 Score=87.01 Aligned_cols=124 Identities=21% Similarity=0.232 Sum_probs=93.2
Q ss_pred HHHHHH-HhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHh
Q 018113 59 YVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGI 136 (360)
Q Consensus 59 ~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~ 136 (360)
.+|.+. +++|.++...|.+.+...+++.+++...+++.+|+++++.+..+.+..+++. ..+++++.+..++..++.|+
T Consensus 240 LlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~ 319 (524)
T PF05977_consen 240 LLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGA 319 (524)
T ss_pred hhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 366665 4689999999999999999999999999999999999999988888888877 77889999998889999999
Q ss_pred HhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018113 137 ATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (360)
Q Consensus 137 ~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (360)
+.....+.... .+.+. +.||+..+....... .+..+|..+.+.+++
T Consensus 320 ~~~~~~~~~~t-~~Q~~~P~~~~GRv~si~~~~~~----g~~~lGsll~G~la~ 368 (524)
T PF05977_consen 320 AWIIANSSLNT-LVQLSVPDWVRGRVFSIYQMVFF----GGMPLGSLLWGFLAD 368 (524)
T ss_pred HHHHHHHHHHH-HHHHhCCHHHHhHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 88877665544 43332 567775555444433 344445555554444
No 168
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.97 E-value=3.8e-08 Score=90.40 Aligned_cols=128 Identities=18% Similarity=0.158 Sum_probs=76.4
Q ss_pred HHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHh
Q 018113 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGI 136 (360)
Q Consensus 58 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~ 136 (360)
..+|.+.++.|.++.+.+...+...++..++.++.|++.||+|||+.+..+.++..+.. .....++.......-.+.|.
T Consensus 252 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (426)
T PRK12307 252 GLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGL 331 (426)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHH
Confidence 44677778889999999988888888888889999999999999999888877766554 33222221112222233333
Q ss_pred Hh--hhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccC
Q 018113 137 AT--SLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (360)
Q Consensus 137 ~~--~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~ 194 (360)
+. ....+.. +.++.|. ++|+...+... ..+. ++..++|.+.+++.+..+
T Consensus 332 ~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~-------~~~~-~~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 332 MATNVGVGGLV-PKFLYDYFPLEVRGLGTGLIY-------NLAA-TSGTFNSMAATWLGITMG 385 (426)
T ss_pred HHhcccHhHHH-HHHHHHhCcHHHHhhhhhHHH-------HHHh-HHHHHHHHHHHHHHHccc
Confidence 22 2222222 2255554 44555333222 2222 455666666666665544
No 169
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.96 E-value=1.6e-07 Score=84.12 Aligned_cols=90 Identities=9% Similarity=0.053 Sum_probs=67.7
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhh-cchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILG 134 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~ 134 (360)
..++|.+.++.|.|..+.+...+...++..++.++.|++.||+ +||+.+..+..+.+++. ...+.++..... .-++.
T Consensus 217 ~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 295 (355)
T TIGR00896 217 IGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVL 295 (355)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHH
Confidence 3557888888999999999999999998999999999999999 56667777777666665 444444333222 45678
Q ss_pred HhHhhhhhhhhhh
Q 018113 135 GIATSLLFSAFES 147 (360)
Q Consensus 135 G~~~~~~~~~~~~ 147 (360)
|++.+..++...+
T Consensus 296 g~~~g~~~~~~~~ 308 (355)
T TIGR00896 296 GLGQGGAFPLALT 308 (355)
T ss_pred HHhhhhHhHHHHH
Confidence 9998888777645
No 170
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.96 E-value=1.7e-07 Score=84.80 Aligned_cols=98 Identities=16% Similarity=0.231 Sum_probs=70.9
Q ss_pred HHHH-HHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhc-----chHHHHHHHHH
Q 018113 60 VYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS-----PQYKILMIGRI 132 (360)
Q Consensus 60 ~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~-----~~~~~l~~~r~ 132 (360)
.|.. .+++|.++.+.+.+.....++..+++++.|++.||+|||+.+..+.....++. +.... ++...+....+
T Consensus 229 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (385)
T TIGR00710 229 APFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMM 308 (385)
T ss_pred ChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 4444 45789999999999888888888899999999999999999888877776654 33221 23445555677
Q ss_pred HHHhHhhhhhhhhhhHHhhhc--cccch
Q 018113 133 LGGIATSLLFSAFESWLVAEH--NKRGF 158 (360)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~--~~r~~ 158 (360)
+.|++.+...+.... ...|. ++|+.
T Consensus 309 ~~g~~~~~~~~~~~~-~~~~~~~~~~g~ 335 (385)
T TIGR00710 309 FVGIGNSMISSIAMA-YALEDFPHVAGT 335 (385)
T ss_pred HHHHHHHHHHHHHHH-HHhccCcccchH
Confidence 888888877776644 55554 34444
No 171
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.95 E-value=2.9e-07 Score=83.61 Aligned_cols=149 Identities=13% Similarity=0.026 Sum_probs=92.7
Q ss_pred HHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhh
Q 018113 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSL 140 (360)
Q Consensus 62 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~ 140 (360)
...+.+|.++.+.|.+.....++..++++..+++.||.++|+++..+... ++.. +..+.++++...+..++.|++.+.
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~g~ 309 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-GLVVLLMALQHSLLPAYPLLILIGALGGF 309 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHhhhh
Confidence 45567899999999999999988889999999999999999888777533 3333 445567777777778889998887
Q ss_pred hhhhhhhHHhhhc--cc--cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHh
Q 018113 141 LFSAFESWLVAEH--NK--RGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (360)
Q Consensus 141 ~~~~~~~~~i~~~--~~--r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (360)
..+...+ .+.+. ++ +|+.. +..+....++..++..+...+ +..+-++...+...+.+........
T Consensus 310 ~~~~~~~-~~q~~~~~~~~~g~~~----a~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~- 378 (393)
T PRK11195 310 FVVPMNA-LLQHRGHVLVGAGHSI----AVQNFNENLAMLLMLGLYSLL-----VKLGVPVVAVIVGFGLLVALAMALL- 378 (393)
T ss_pred hhhhHHH-HHHhhCcccccchhHH----HHHhHHHHHHHHHHHHHHHHH-----HHcCCCHHHHHHHHHHHHHHHHHHH-
Confidence 7666544 44444 21 34432 233333344443444433322 2345565555555544433333333
Q ss_pred hhhccc
Q 018113 217 SSWTEN 222 (360)
Q Consensus 217 ~~~~~~ 222 (360)
+++.|+
T Consensus 379 ~~~~~~ 384 (393)
T PRK11195 379 WRWHRR 384 (393)
T ss_pred HHHHHh
Confidence 444443
No 172
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.95 E-value=2.2e-07 Score=81.38 Aligned_cols=135 Identities=13% Similarity=0.137 Sum_probs=88.6
Q ss_pred HHHHHHHH---hhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHH
Q 018113 58 PYVYYLYS---TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRIL 133 (360)
Q Consensus 58 ~~~~~~~~---~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l 133 (360)
...+...+ ++|+++++.+...+....+..++....+++.||+|+||.+..+..+..++. +....++... ..+-++
T Consensus 161 ~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l 239 (310)
T TIGR01272 161 SFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLA 239 (310)
T ss_pred HHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHH
Confidence 33444444 369999999999999999888999999999999999999888877776655 4444444332 335567
Q ss_pred HHhHhhhhhhhhhhHHhhhccc-cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhh
Q 018113 134 GGIATSLLFSAFESWLVAEHNK-RGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAA 204 (360)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~~~-r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~ 204 (360)
.|++.+..+|...+....+..+ .+...+ . ...+. +|..+.|.+.+.+.|..+ .+..+++.
T Consensus 240 ~g~~~s~i~P~~~s~a~~~~~~~~~~asa----i----~~~~~-~Gg~i~P~l~G~lad~~g--~~~a~~v~ 300 (310)
T TIGR01272 240 LGLFNSIMFPTIFSLALNALGRHTSQGSG----I----LCLAI-VGGAIVPLLQGSLADCLG--IQLAFALP 300 (310)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhHH----H----HHHHH-hcchHHHHHHHHHHHhcc--chHHHHHH
Confidence 8999999999876623333322 222111 1 12233 666777777777776544 34455433
No 173
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.94 E-value=3.9e-07 Score=82.32 Aligned_cols=165 Identities=17% Similarity=0.208 Sum_probs=105.5
Q ss_pred HHHHHHHhhhhhHHHHHHHHhhC-CChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhc-c
Q 018113 46 YSLMMAGDWLQGPYVYYLYSTYG-FGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS-P 122 (360)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~-~ 122 (360)
+++..........+.+...+|.| .+....+.+.+.+.+.=.+.-...+++..|+|.|+++.++.+..++=. +.+.. +
T Consensus 216 ~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~ 295 (400)
T PF03825_consen 216 AFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSD 295 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33444444444566677778887 677777877666666555555578999999999999999999988854 55555 4
Q ss_pred hHHHHH----HHHHHHHhHhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCC--
Q 018113 123 QYKILM----IGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLG-- 196 (360)
Q Consensus 123 ~~~~l~----~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~-- 196 (360)
+.+... ....+.|+..+..+.+... ++.+..+++. ....+++...+.+++|..++..+++++.|..+-+
T Consensus 296 ~~~~~~~~~~l~q~lhG~tf~~~~~a~~~-yi~~~~p~~~----~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~ 370 (400)
T PF03825_consen 296 PWPFIVALQLLGQLLHGLTFGLFHAASVR-YIDRIAPPEL----RATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGM 370 (400)
T ss_pred CcHHHHHHHHHHHhhhhHHHHHHHHHHHH-HHHHhCCccc----hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhh
Confidence 544333 3356799999999888856 8877622222 1224444445566677788888888887765533
Q ss_pred --CchhhhhhHHHHHHHHHHH
Q 018113 197 --PVAPFDAAACFLAIGMVII 215 (360)
Q Consensus 197 --~~~~~~~~~~~~~~~~~~~ 215 (360)
|...+.+.+.+.++..++.
T Consensus 371 ~~~~~~~~v~a~~~~~~~~~f 391 (400)
T PF03825_consen 371 FDWSAVFLVFAVMALVILVLF 391 (400)
T ss_pred hhHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444333333
No 174
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.94 E-value=7.3e-08 Score=80.33 Aligned_cols=129 Identities=19% Similarity=0.121 Sum_probs=95.2
Q ss_pred hHHHHHHHHHHHHHhhhh---hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHH
Q 018113 39 KNNYLLVYSLMMAGDWLQ---GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS 115 (360)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~ 115 (360)
||..+......+...+.. +.+.|++.+++|+|.+|...+.+...++..+ +++.|.+.||+|+|.++.++.+...+|
T Consensus 1 rW~~l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~G 79 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVG 79 (250)
T ss_pred ChhhHHHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 455555555555555444 5669999999999999999999998887764 789999999999999999999999887
Q ss_pred H-HHH--h-----cchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc-cccchhhHHHHHHHH
Q 018113 116 C-ITK--H-----SPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFS 168 (360)
Q Consensus 116 ~-l~~--~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~ 168 (360)
. ... . .++++.+.+..++.|.+.+...+++...-+.+. ++||...+...+.++
T Consensus 80 Y~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~G 141 (250)
T PF06813_consen 80 YGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFG 141 (250)
T ss_pred HHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHH
Confidence 6 322 2 246677777777777776665554433223333 789998887777666
No 175
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.94 E-value=5.2e-08 Score=85.30 Aligned_cols=148 Identities=14% Similarity=0.203 Sum_probs=91.4
Q ss_pred hHHHHHH-HHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhc-------chHH--
Q 018113 57 GPYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS-------PQYK-- 125 (360)
Q Consensus 57 ~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~-------~~~~-- 125 (360)
+..+|.+ .++|+.++.+.|.......+.+.+.-+.+|+++||+|.+|++......++++. +.... ++..
T Consensus 238 s~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~ 317 (417)
T COG2223 238 SAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVF 317 (417)
T ss_pred HHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHH
Confidence 3445554 45899999999988888888899999999999999999999998888887755 33332 2222
Q ss_pred --HHHHHHHHHHhHhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhh
Q 018113 126 --ILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDA 203 (360)
Q Consensus 126 --~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~ 203 (360)
.++...+..|+|.|..+-.. +.+-. ++-|. ..+.....| ++|+..-|..-+...+..+ .+...|+.
T Consensus 318 ~~~~l~l~~~~G~GnGsvfk~I-p~if~--~~~G~-------v~G~vga~G-~lGGf~lp~~~g~~~~~tg-~~~~~f~~ 385 (417)
T COG2223 318 VAVFLALFVFAGLGNGSVFKMI-PVIFP--KETGA-------VTGIVGAIG-GLGGFFLPLAFGVSLDLTG-SYTGAFML 385 (417)
T ss_pred HHHHHHHHHHhccCcchheeec-hHHHH--hhhhH-------HHHHHHHhc-cccccchhHHHHHHHHhcc-cHHHHHHH
Confidence 45556777777777665443 21211 11111 222111222 2444444444454455545 45566666
Q ss_pred hHHHHHHHHHHHh
Q 018113 204 AACFLAIGMVIIL 216 (360)
Q Consensus 204 ~~~~~~~~~~~~~ 216 (360)
...+.+++..+..
T Consensus 386 ~~~~~~~a~v~~~ 398 (417)
T COG2223 386 LLAFYLVALVLTW 398 (417)
T ss_pred HHHHHHHHHHHHH
Confidence 6666665555543
No 176
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.93 E-value=2.6e-07 Score=84.24 Aligned_cols=86 Identities=15% Similarity=0.138 Sum_probs=51.4
Q ss_pred HHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-H-H-Hhc----chHHHHHHH-
Q 018113 59 YVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-I-T-KHS----PQYKILMIG- 130 (360)
Q Consensus 59 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l-~-~~~----~~~~~l~~~- 130 (360)
++|.+.++ +.+............+.+.+..+++|+++||+|+||++.++.+...+.. . . ... .+++.+.+.
T Consensus 274 ~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~ 352 (462)
T PRK15034 274 GFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVF 352 (462)
T ss_pred HHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHH
Confidence 35555544 2333333333344556678888999999999999999999887776644 2 1 221 234444333
Q ss_pred ---HHHHHhHhhhhhhhh
Q 018113 131 ---RILGGIATSLLFSAF 145 (360)
Q Consensus 131 ---r~l~G~~~~~~~~~~ 145 (360)
-+..|+|.|..+-..
T Consensus 353 ~~l~~~~G~gngsvfk~i 370 (462)
T PRK15034 353 MGLFLTAGLGSGSTFQMI 370 (462)
T ss_pred HHHHHHhcccchHHHHhh
Confidence 344566666665333
No 177
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.93 E-value=8.7e-08 Score=89.23 Aligned_cols=144 Identities=14% Similarity=0.041 Sum_probs=79.7
Q ss_pred HHHH-HHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchH-------HHHHHHHHHHHHH-HHHhcchHHHHHHH
Q 018113 60 VYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKR-------ACVTYCLTYILSC-ITKHSPQYKILMIG 130 (360)
Q Consensus 60 ~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~-------~l~~~~~~~~~~~-l~~~~~~~~~l~~~ 130 (360)
+|.+ .+++|.+..+.+.+.+...++..++.++.|+++||+|||+ .......+.++.. +....++.+...+.
T Consensus 275 ~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 354 (476)
T PLN00028 275 IAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVV 354 (476)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 4444 5678999999999988888989999999999999998762 2222222222322 33445555555555
Q ss_pred HHHHHhHhhhhhhhhhhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHH
Q 018113 131 RILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFL 208 (360)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 208 (360)
-++.+++.+...+...+ ++.+. ++++...+. ...+..+|+.+++.+.+. + ...+|+..|...+++.
T Consensus 355 ~~l~~~~~~~~~~~~~~-~~~~~~~~~~g~~~g~--------~~~~g~lg~~i~~~l~~~--~-~~~~y~~~f~~~~~~~ 422 (476)
T PLN00028 355 MILFSIFVQAACGATFG-IVPFVSRRSLGVISGL--------TGAGGNVGAVLTQLLFFT--G-SSYSTETGISLMGVMI 422 (476)
T ss_pred HHHHHHHHHHhhhhhcc-cCcccChhhchhhhhh--------hhccccHHHHHHHHHHHh--c-CCccHhhHHHHHHHHH
Confidence 55666655444343322 34443 334332211 122334566666554331 1 1124555666655544
Q ss_pred HHHHHHH
Q 018113 209 AIGMVII 215 (360)
Q Consensus 209 ~~~~~~~ 215 (360)
+++.+..
T Consensus 423 ~i~~~~~ 429 (476)
T PLN00028 423 IACTLPV 429 (476)
T ss_pred HHHHHHH
Confidence 4444443
No 178
>PRK10054 putative transporter; Provisional
Probab=98.93 E-value=1.7e-07 Score=85.09 Aligned_cols=139 Identities=9% Similarity=0.052 Sum_probs=89.2
Q ss_pred HhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhc-chHHHHHHHHHHHHhHhhhhh
Q 018113 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS-PQYKILMIGRILGGIATSLLF 142 (360)
Q Consensus 65 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~-~~~~~l~~~r~l~G~~~~~~~ 142 (360)
++.+.+....+.............+.+.|++.||+++|+.+..+..+..++. ...+. ++.+.+.+..++.|++.+...
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 4556666677777777666566666788999999999999998887777766 44443 567777778899999988776
Q ss_pred hhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHH
Q 018113 143 SAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (360)
Q Consensus 143 ~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (360)
|.... ++.+. +.|+...+ ..+ . ..+|..++|.+++.+.|+.+. ...|++.+....+..++.
T Consensus 317 p~~~~-~~~~~~p~~~~~~~~~----~~~----~-~~~G~~~Gp~~~G~l~~~~g~--~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 317 PGEYM-LIDHIAPPGMKASYFS----AQS----L-GWLGAAINPLVSGVILTTLPP--WSLFVILALAIVAAWLLM 380 (395)
T ss_pred hhHHH-HHHHhCCcccceehHh----HHH----H-HHHHHHHHHHHHHHHHHHcCh--hhHHHHHHHHHHHHHHHH
Confidence 66543 56554 34444211 111 1 225666777777777776543 344555544444444444
No 179
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.92 E-value=2.3e-07 Score=85.91 Aligned_cols=149 Identities=11% Similarity=0.010 Sum_probs=79.6
Q ss_pred hHHHHHHHHh-hCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhh--cchHHHH-HHHHHHHHHH-HHHh--cchHHHHHH
Q 018113 57 GPYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ--GRKRACV-TYCLTYILSC-ITKH--SPQYKILMI 129 (360)
Q Consensus 57 ~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~--Grr~~l~-~~~~~~~~~~-l~~~--~~~~~~l~~ 129 (360)
..+.|.+.++ .|.+..+.+.......++..++.++.|+++||+ |||+... ....+..++. .... .++.....+
T Consensus 273 ~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 352 (452)
T PRK11273 273 LDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMA 352 (452)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHH
Confidence 4557776654 789999988888777777778888999999999 5554322 2222223332 2212 234444444
Q ss_pred HHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHH
Q 018113 130 GRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAAC 206 (360)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 206 (360)
+.++.|.+........ .++..|. ++|+...+.... .++..+...+|.+.+.+.|+.+ |+..|.+...
T Consensus 353 ~~~~~g~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~-------~~~~g~~~~g~~v~g~l~~~~g--~~~~f~~~~~ 422 (452)
T PRK11273 353 CMIVIGFLIYGPVMLI-GLHALELAPKKAAGTAAGFTGL-------FGYLGGSVAASAIVGYTVDFFG--WDGGFMVMIG 422 (452)
T ss_pred HHHHHHHHHHhHHHHH-HHHHHHHcChhhhhhHHHHHHH-------HHHHHHHHhhhhhHHHHHHHhc--chHHHHHHHH
Confidence 4555555432221221 2234444 445553333322 2221122335666666666655 5566666655
Q ss_pred HHHHHHHHH
Q 018113 207 FLAIGMVII 215 (360)
Q Consensus 207 ~~~~~~~~~ 215 (360)
..+++.+..
T Consensus 423 ~~~~~~~~~ 431 (452)
T PRK11273 423 GSILAVILL 431 (452)
T ss_pred HHHHHHHHH
Confidence 555554444
No 180
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.92 E-value=7.8e-08 Score=87.50 Aligned_cols=124 Identities=19% Similarity=0.291 Sum_probs=84.2
Q ss_pred HHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH--HHHhcchHHHHHHHHHHHHhHhh
Q 018113 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC--ITKHSPQYKILMIGRILGGIATS 139 (360)
Q Consensus 62 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~--l~~~~~~~~~l~~~r~l~G~~~~ 139 (360)
++.+++|.+..+.+.+.+...++..++.++.|++.||+|||+.+..+.....+.. +....++.+.+.+..++.|...+
T Consensus 264 ~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (405)
T TIGR00891 264 YLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQ 343 (405)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHc
Confidence 4446789999999999888888888999999999999999999888877654432 33345566666666677776666
Q ss_pred hhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccC
Q 018113 140 LLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (360)
Q Consensus 140 ~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~ 194 (360)
...+.... ++.|. ++|++..+... .++ .+|..++|.+.+.+.++.|
T Consensus 344 ~~~~~~~~-~~~~~~~~~~~~~~~g~~~-------~~~-~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 344 GIWGILPK-HLGEYFPTDQRAAGLGFTY-------QLG-NLGGALAPIIGALLAQRLD 392 (405)
T ss_pred cchhhHHH-HHhhhCCcchhHHHhhHHH-------HHH-HHHHHHHHHHHHHHHHhcc
Confidence 55555534 66665 45555333222 222 2556666777777766555
No 181
>PRK11043 putative transporter; Provisional
Probab=98.91 E-value=2.6e-07 Score=84.23 Aligned_cols=105 Identities=11% Similarity=0.132 Sum_probs=70.5
Q ss_pred HHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH----HHHh--cchHHHHHHHH
Q 018113 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC----ITKH--SPQYKILMIGR 131 (360)
Q Consensus 58 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~----l~~~--~~~~~~l~~~r 131 (360)
.+.|.+.+++|.++.+.|.......++..+++...+++.||+|+|+.........+++. .... .++....+...
T Consensus 224 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (401)
T PRK11043 224 TGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPF 303 (401)
T ss_pred HHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHH
Confidence 34667778899999999987776666667777788999999999997766555444432 1122 34555556666
Q ss_pred HHHHhHhhhhhhhhhhHHhhhc--cccchhhHHH
Q 018113 132 ILGGIATSLLFSAFESWLVAEH--NKRGFEQQWL 163 (360)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~ 163 (360)
.+.|++.+..++.... ...|. ++|+...+..
T Consensus 304 ~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~g~~ 336 (401)
T PRK11043 304 CVMAAANGAIYPIVVA-QALRPFPQATGKAAALQ 336 (401)
T ss_pred HHHHHHHHHHHHHHHH-HHhhhCcccChHHHHHH
Confidence 7788888888777645 44343 4566644443
No 182
>PRK10133 L-fucose transporter; Provisional
Probab=98.91 E-value=2.6e-07 Score=85.05 Aligned_cols=87 Identities=14% Similarity=0.106 Sum_probs=68.9
Q ss_pred HHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhhhh
Q 018113 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLF 142 (360)
Q Consensus 64 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~ 142 (360)
++++|.++.+.+..+....++..++..+.|++.||+|+|+++..+..+..++. +..+.++. ..+..-.+.|++.+..+
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~ 365 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGH-VGLIALTLCSAFMSIQY 365 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHH
Confidence 34689999999999999999889999999999999999999988877766655 44444543 23455678899999999
Q ss_pred hhhhhHHhhh
Q 018113 143 SAFESWLVAE 152 (360)
Q Consensus 143 ~~~~~~~i~~ 152 (360)
|...+ ...|
T Consensus 366 P~~~s-~a~~ 374 (438)
T PRK10133 366 PTIFS-LGIK 374 (438)
T ss_pred HHHHH-HHHc
Confidence 98866 4444
No 183
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.91 E-value=1.2e-07 Score=84.86 Aligned_cols=104 Identities=16% Similarity=0.126 Sum_probs=76.5
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHH-HHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHh-c----------ch
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGF-GSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH-S----------PQ 123 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~-~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~-~----------~~ 123 (360)
....|...+++|.++++.+.+..... +...++.+++|++.||+|||+.+..+.++.+++. +..+ + ++
T Consensus 229 ~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (356)
T TIGR00901 229 TVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPH 308 (356)
T ss_pred HHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccch
Confidence 34566666779999999998776544 4566777789999999999999888888777655 3332 2 34
Q ss_pred HHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhH
Q 018113 124 YKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQ 161 (360)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~ 161 (360)
.+.+..+.++.+++.+..++...+ ++.|. ++|++..+
T Consensus 309 ~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~p~~~~g~~~g 348 (356)
T TIGR00901 309 LLMLFLTITLEAVTGGLGTVAFVA-FLSKLSNPKFGATQMA 348 (356)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHH-HHHHhcCCCccHHHHH
Confidence 567777888999998888887755 77665 55665333
No 184
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.90 E-value=2.3e-07 Score=84.52 Aligned_cols=148 Identities=14% Similarity=0.040 Sum_probs=89.1
Q ss_pred HHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhh-hhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD-KQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 58 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~D-r~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
.+.|...+|.+.++.+.+.+.+...+.......+.+++.| |++.|+.+..+..+.+++. +.++.++++.+.+...+.|
T Consensus 229 ~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 308 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFY 308 (400)
T ss_pred HhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3467766776667788888877766655555555566665 5676777777777777766 5567788877777788888
Q ss_pred hHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccC-CC-CchhhhhhHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS-LG-PVAPFDAAACFLAI 210 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~-~~-~~~~~~~~~~~~~~ 210 (360)
++.+...|.... ++.|. ++|+...+.. +.... +|..+++.+++.+.|+.+ .+ ....+.....+.++
T Consensus 309 ~g~~~~~p~~~~-~~~~~~p~~~~g~~~g~~----~~~~~----~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~ 379 (400)
T PRK11646 309 IGSIIAEPARET-LSASLADARARGSYMGFS----RLGLA----LGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLI 379 (400)
T ss_pred HHHHHHHccHHH-HHHhcCCcccchhhhhHH----HHHHH----HHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHH
Confidence 888777666644 66554 5566643332 22223 455555556665555421 12 13344444444444
Q ss_pred HHHH
Q 018113 211 GMVI 214 (360)
Q Consensus 211 ~~~~ 214 (360)
....
T Consensus 380 ~~~~ 383 (400)
T PRK11646 380 TLLA 383 (400)
T ss_pred HHHH
Confidence 4333
No 185
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.90 E-value=3.2e-07 Score=84.54 Aligned_cols=147 Identities=14% Similarity=0.062 Sum_probs=80.1
Q ss_pred HHHHHHH-HhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhh--cchHHH-HHHHHHHHHH--HHHH-hcchHHHHHHH
Q 018113 58 PYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ--GRKRAC-VTYCLTYILS--CITK-HSPQYKILMIG 130 (360)
Q Consensus 58 ~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~--Grr~~l-~~~~~~~~~~--~l~~-~~~~~~~l~~~ 130 (360)
.+.|.+. +++|.|..+.+...+...+++.++.++.|+++||+ ++|+.. ....+...+. .+.. ...+.......
T Consensus 264 ~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (434)
T PRK11663 264 DWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAAC 343 (434)
T ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHH
Confidence 4456665 67899999999888888888889999999999999 333332 2221111111 1111 12233333333
Q ss_pred HHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHH
Q 018113 131 RILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACF 207 (360)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 207 (360)
.+..|++........ ...+.|. ++|+...+..+ ..++ +|..++|.+.+.+.++.+ |...|...+.+
T Consensus 344 ~~~~g~~~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~-------~~~~-~g~~~~p~~~g~l~~~~g--~~~~f~~~~~~ 412 (434)
T PRK11663 344 FFTIGFFVFGPQMLI-GMAAAECSHKEAAGAATGFVG-------LFAY-LGAALSGYPLAKVLEIWH--WTGFFVVISIA 412 (434)
T ss_pred HHHHHHHHhhHHHHH-HHHHHhcccHhhHHhHHHHHH-------HHHH-HHHHHhcccHHHHHHhcc--cHHHHHHHHHH
Confidence 444444322211111 2244554 34444332222 2222 566777777777777644 55667666666
Q ss_pred HHHHHHHH
Q 018113 208 LAIGMVII 215 (360)
Q Consensus 208 ~~~~~~~~ 215 (360)
.++..+..
T Consensus 413 ~~~~~~~~ 420 (434)
T PRK11663 413 AGISALLL 420 (434)
T ss_pred HHHHHHHH
Confidence 65555444
No 186
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.89 E-value=4.2e-08 Score=85.99 Aligned_cols=173 Identities=15% Similarity=0.044 Sum_probs=113.6
Q ss_pred hHHHHHHHHHHHHHhhhhhHH---HHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHH
Q 018113 39 KNNYLLVYSLMMAGDWLQGPY---VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS 115 (360)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~ 115 (360)
+-.+.++..-....|+.++.. ...-.+++|++..++........+.+.+++.+.|++.||+|.|+++..+.++..+.
T Consensus 252 ~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~ 331 (438)
T COG2270 252 KNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIA 331 (438)
T ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHH
Confidence 334444555556667777433 22334599999999999888888889999999999999999999999999999886
Q ss_pred H-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 018113 116 C-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD 191 (360)
Q Consensus 116 ~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~ 191 (360)
+ ...+......+.++..+.|...|..+....+ +..+. ++.++. .+.+++.-- ....++|++.+.+.+
T Consensus 332 ~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRS-y~~~lvp~~k~~~f----Fglyaltgr----a~S~~gp~lv~v~t~ 402 (438)
T COG2270 332 ALYLIFLEGELDFWILGLLVGTSLGGAQASSRS-YLARLVPKGKEGRF----FGLYALTGR----AASFLGPFLVAVITQ 402 (438)
T ss_pred HHHHHHccccHHHHHHHHHHHHhcchHHHHHHH-HHHHhCCCccccce----eehhhhhhh----HHHHHHHHHHHHHHH
Confidence 6 4444555666777889999999999999988 77765 333332 223333322 334555555554444
Q ss_pred ccCCCCchhhhhhHHHHHHHHHHHhhhhccc
Q 018113 192 SFSLGPVAPFDAAACFLAIGMVIILSSWTEN 222 (360)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (360)
..+ .-|.-+....++..+..... .+.|++
T Consensus 403 iTg-~~r~g~~~i~vll~iGl~~L-~~v~~~ 431 (438)
T COG2270 403 ITG-SSRAGVLSIIVLLLIGLLLL-LRVKVP 431 (438)
T ss_pred Hhc-chhhHHHHHHHHHHhhHhhE-EeecCC
Confidence 333 24444544444444444444 444443
No 187
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.88 E-value=9.9e-07 Score=79.60 Aligned_cols=118 Identities=14% Similarity=0.088 Sum_probs=71.7
Q ss_pred HHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHH-H-HH--Hh-cchHHHHHHHHHHHHh
Q 018113 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS-C-IT--KH-SPQYKILMIGRILGGI 136 (360)
Q Consensus 62 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~-~-l~--~~-~~~~~~l~~~r~l~G~ 136 (360)
...+++|.++.+.|.......+...++.++.|++.||+|||+.+..+.....+. . +. .. ..+.+...++-.+.+.
T Consensus 220 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (377)
T PRK11102 220 VYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVG 299 (377)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 344568999999999999888888899999999999999999998887765442 2 21 22 2344444444444444
Q ss_pred HhhhhhhhhhhHHhhhc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018113 137 ATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (360)
Q Consensus 137 ~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (360)
+.+...+.... ++.|. ++++...+. .......+|..+++.++.
T Consensus 300 ~~~~~~~~~~~-~~~~~~~~~~g~~~~~-------~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 300 CVSMISSNAMA-VILDEFPHMAGTASSL-------AGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHhhHHHHH-HHhccccccchHHHHH-------HHHHHHHHHHHHHHHHHh
Confidence 44444444433 44443 344442222 222333455555555543
No 188
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.88 E-value=3.8e-07 Score=80.00 Aligned_cols=152 Identities=16% Similarity=0.128 Sum_probs=94.1
Q ss_pred HHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhh--cchHHHHHHHHHH-HHHH-HHHhcc--hHHHHHHHHHHHH
Q 018113 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ--GRKRACVTYCLTY-ILSC-ITKHSP--QYKILMIGRILGG 135 (360)
Q Consensus 62 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~--Grr~~l~~~~~~~-~~~~-l~~~~~--~~~~l~~~r~l~G 135 (360)
++.|+.|.|..+.++..+..-.++..+.++.|+++||. |||...-+...+. .++. ..-.++ |+.+..++-++.|
T Consensus 278 YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iG 357 (448)
T COG2271 278 YLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIG 357 (448)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHH
Confidence 56678899999999999999999999999999999996 6666544433333 3333 223344 5577788888888
Q ss_pred hHhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (360)
+..-+..-.. .....|..++.. ..+..+.....++..|...+....++..|..||. ..|.+..+.++++.++.
T Consensus 358 f~IyGPqmLi-Gl~a~e~~pK~A----aGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~--g~Fi~~~~~a~l~~lll 430 (448)
T COG2271 358 FLIYGPQMLI-GLAAAEFVPKKA----AGTATGFVGLFAYLIGAALAGLPLGYIADTWGWD--GGFIVLSIAALLAILLL 430 (448)
T ss_pred HHHhhHHHHH-HHHHhccccHhh----ccchhchhhhHHHHhhHHhcCCcceeeEecCCCc--chHHHHHHHHHHHHHHH
Confidence 8765543222 323445422222 1122333334455457788888888887775555 44555444444444444
Q ss_pred hhhhc
Q 018113 216 LSSWT 220 (360)
Q Consensus 216 ~~~~~ 220 (360)
.+.+.
T Consensus 431 ~~~~~ 435 (448)
T COG2271 431 LPVWN 435 (448)
T ss_pred HHHHh
Confidence 44444
No 189
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.88 E-value=7.5e-07 Score=81.42 Aligned_cols=271 Identities=18% Similarity=0.127 Sum_probs=140.8
Q ss_pred HHHHHHHHHHHHhhhhh----HHHHHHHHhhCCChhhh-HHHHH----HHHHHHhhhhhhhhhhhhhhcchHHHHHHHHH
Q 018113 41 NYLLVYSLMMAGDWLQG----PYVYYLYSTYGFGKGEI-GQLFI----AGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (360)
Q Consensus 41 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~s~~~~-g~~~~----~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~ 111 (360)
......++..+..++.. +..+...+.++.+..+. +.... ...+...+.++..|.++||+|||..+......
T Consensus 22 ~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~ 101 (463)
T KOG2816|consen 22 HLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFG 101 (463)
T ss_pred HHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHH
Confidence 34444455555555543 33444444444433322 22222 22455778888999999999999999999988
Q ss_pred HHHHHHHHhcchHHHHHHHHHHHHhH--hhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 018113 112 YILSCITKHSPQYKILMIGRILGGIA--TSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (360)
Q Consensus 112 ~~~~~l~~~~~~~~~l~~~r~l~G~~--~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 186 (360)
..+...+..-+.++.++ +.|+. .+.......+ +++|. ++|....+.....+. .+..++|.++
T Consensus 102 ~~l~~~~~~~~~~~~~~----~~~l~g~~~~~~s~~~a-~vadis~~~~R~~~~gll~~~~~--------~~~~~~p~~~ 168 (463)
T KOG2816|consen 102 TILPALCLLFQGYWFFL----LLGLSGGFSAIFSVGFA-YVADISSEEERSSSIGLLSGTFG--------AGLVIGPALG 168 (463)
T ss_pred HHHhHHHHHHHHHHHhh----hcccccchhhhhhhhhh-heeeccchhHHHHHHHHHHHHHH--------HHHhHHHHHH
Confidence 88866333323344433 33332 2223344434 67776 555554444443333 3444455555
Q ss_pred hhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhccccCCCCcch---------h-HHHHHHHHHH---HHhcchhHHHHH
Q 018113 187 NLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESK---------D-LLTQFRGAAV---AIASDEKIALLG 253 (360)
Q Consensus 187 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~---~~~~~~~~~~~~ 253 (360)
+.+.+. .+....|.+..+...+.........||+..++++.+ + ......+..+ ....+|..+.+.
T Consensus 169 ~~~~~~--~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~ 246 (463)
T KOG2816|consen 169 GYLVKF--LGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLL 246 (463)
T ss_pred HHHHHh--cCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccchhhhhhhhhhcccCCCccchHHH
Confidence 554443 344467788888777777777677777655444331 1 1111111111 222334444433
Q ss_pred HHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHH-HHHhhcCCChhhHHHHHHHHHHHHHH
Q 018113 254 AIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLAS-RLMARSPPRVESYMQIVFVVSSVSLL 328 (360)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g-~l~dr~g~~~~~~~~~~~~~~~~~~~ 328 (360)
..................+.|.+..++.+. +...+.......++..... .+...++.|+ .+..+...-.+...
T Consensus 247 l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~--~i~lGl~~~~~~~~ 323 (463)
T KOG2816|consen 247 LVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKR--LISLGLLSEFLQLL 323 (463)
T ss_pred HHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--HhhHHHHHHHHHHH
Confidence 333332222221112134667777777766 3444555666666666555 6777777773 34444433333333
No 190
>PRK09669 putative symporter YagG; Provisional
Probab=98.87 E-value=1.7e-07 Score=86.63 Aligned_cols=111 Identities=15% Similarity=0.110 Sum_probs=70.4
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HH-Hh-cchHHHHHHHHHHHHhHhhhhhhhhhhHHh
Q 018113 74 IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT-KH-SPQYKILMIGRILGGIATSLLFSAFESWLV 150 (360)
Q Consensus 74 ~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~-~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i 150 (360)
.+.+.....+...++.+++++++||+|+|+.+..+.+...+.. .. .. .++.+.+.+..++.|++.+...+...+ ++
T Consensus 266 ~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~a-m~ 344 (444)
T PRK09669 266 ATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWS-MF 344 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 3445555556666777789999999999999988877665433 22 22 356667778888999999988777655 66
Q ss_pred hhc---cc--cc-hhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 018113 151 AEH---NK--RG-FEQQWLSITFSKAIFLGNGLVAILSGLF 185 (360)
Q Consensus 151 ~~~---~~--r~-~~~~~~~~~~~~~~~~g~~~g~~~~~~l 185 (360)
+|. ++ .| +..+...+..+....+|.++|+.+++.+
T Consensus 345 ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~l 385 (444)
T PRK09669 345 SDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWI 385 (444)
T ss_pred HhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 654 11 12 2233344455555555665555555443
No 191
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.87 E-value=5.8e-06 Score=73.57 Aligned_cols=85 Identities=19% Similarity=0.225 Sum_probs=65.6
Q ss_pred hHH-HHHHHHh-hCCChhhhH-HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHH
Q 018113 57 GPY-VYYLYST-YGFGKGEIG-QLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRI 132 (360)
Q Consensus 57 ~~~-~~~~~~~-~g~s~~~~g-~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~ 132 (360)
-|+ .|++.+. .|++..|+. -++-...-.....-.+...+.|..|.|++++.+.+...+.. +.-+.++...+-+..+
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~ 102 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQF 102 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHH
Confidence 377 6666664 899999986 34333333333444468899999999999999988887766 6778899999999999
Q ss_pred HHHhHhhhh
Q 018113 133 LGGIATSLL 141 (360)
Q Consensus 133 l~G~~~~~~ 141 (360)
..|++.+..
T Consensus 103 ~yg~~~a~e 111 (412)
T PF01770_consen 103 FYGLATAAE 111 (412)
T ss_pred HHHHHHHHH
Confidence 999988775
No 192
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.86 E-value=1.4e-07 Score=86.68 Aligned_cols=130 Identities=21% Similarity=0.249 Sum_probs=93.1
Q ss_pred hhhhHHHHHHHHh-hCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhc--chHHHHHH
Q 018113 54 WLQGPYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS--PQYKILMI 129 (360)
Q Consensus 54 ~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~--~~~~~l~~ 129 (360)
.......+++.++ .|.+ ...+.......+...+..+++++++||+|+|+.+..+.++.+++. +..+. +|.+.+++
T Consensus 242 ~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 320 (428)
T PF13347_consen 242 ALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLI 320 (428)
T ss_pred hhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 3334444555554 4544 566777777888888888999999999999999999999998876 55554 48899999
Q ss_pred HHHHHHhHhhhhhhhhhhHHhhhc------cccchhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 018113 130 GRILGGIATSLLFSAFESWLVAEH------NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (360)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~------~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 185 (360)
..++.|++.+..+....+ +++|. +...+..+...+..+...-++.+++..+.+.+
T Consensus 321 ~~~l~gi~~~~~~~~~~a-~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 321 LFILAGIGYGAFFVIPWA-MLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred HHHHhHhhhccccccccc-ccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 999999999998877755 66654 11123455566666666666666666655443
No 193
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.85 E-value=3.1e-07 Score=83.11 Aligned_cols=145 Identities=13% Similarity=0.003 Sum_probs=79.7
Q ss_pred hHHHHHH-HHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchH--HHHHHHHH------HHHHH-HHHhcchHHH
Q 018113 57 GPYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKR--ACVTYCLT------YILSC-ITKHSPQYKI 126 (360)
Q Consensus 57 ~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~--~l~~~~~~------~~~~~-l~~~~~~~~~ 126 (360)
..+.|.+ .+++|.++.+.+.......+...++.++.|+++||+|||+ ........ ..+.. .....++...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (399)
T TIGR00893 235 LTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYA 314 (399)
T ss_pred HHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHH
Confidence 3445544 4568999999999988888888899999999999999996 11111111 11111 1112233344
Q ss_pred HHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhh
Q 018113 127 LMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDA 203 (360)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~ 203 (360)
......+.+.+.+ ..+.... ++.|. ++|+...+.... . ..+|..+++.+.+.+.+..+ ++...+..
T Consensus 315 ~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~g~~~~~~~~----~----~~~g~~~~~~i~g~l~~~~g-~~~~~~~~ 383 (399)
T TIGR00893 315 ALALVALGFFGLG-AGAIGWA-LISDNAPGNIAGLTGGLINS----L----GNLGGIVGPIVIGAIAATTG-SFAGALMV 383 (399)
T ss_pred HHHHHHHHHhchh-hhhHHHH-HHHhhcChhHHHHHHHHHHH----H----HHHhhhhhhHHhhhhccCCC-chhHHHHH
Confidence 4434444444443 4555534 66665 445553322222 2 22555666666666666544 13445555
Q ss_pred hHHHHHHHH
Q 018113 204 AACFLAIGM 212 (360)
Q Consensus 204 ~~~~~~~~~ 212 (360)
.+.+.++..
T Consensus 384 ~~~~~~~~~ 392 (399)
T TIGR00893 384 VAALALIGA 392 (399)
T ss_pred HHHHHHHHH
Confidence 544444433
No 194
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.85 E-value=2.2e-06 Score=78.59 Aligned_cols=147 Identities=17% Similarity=0.139 Sum_probs=89.2
Q ss_pred HHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhc-----chHHHHHHHHHHHHHH-HHHh----cchHHHH
Q 018113 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG-----RKRACVTYCLTYILSC-ITKH----SPQYKIL 127 (360)
Q Consensus 58 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~G-----rr~~l~~~~~~~~~~~-l~~~----~~~~~~l 127 (360)
+..|.+.+++|+++++.....+...+ -....++.|.++|-+- ||+-++++.++.+++. ..+. ..+....
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~l-Pw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~ 89 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASL-PWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIA 89 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhC-chHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhH
Confidence 44678889999999999887777666 4456788999999762 4445555665554443 2322 2356666
Q ss_pred HHHHHHHHhHhhhhhhhhhhHHhhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHH
Q 018113 128 MIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAAC 206 (360)
Q Consensus 128 ~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 206 (360)
.+.-++..+|.......+.+ ++.|. ++.....+..++.......+|+ +++..+++.+.+..+.+ ..|.+.+.
T Consensus 90 ~~~l~la~~g~a~~DV~aDa-~vvE~~~~~p~~~g~lqS~~~~~~~~G~----lv~~~l~G~l~~~~~~~--~~f~i~~~ 162 (433)
T PF03092_consen 90 VVLLFLASFGYAFADVAADA-LVVELARREPESRGDLQSFVWGVRSVGS----LVGSLLSGPLLDSFGPQ--GVFLISAA 162 (433)
T ss_pred HHHHHHHHHHHHHHHHhhhH-HHHHHhhcCCchhHHHHHHHHHHHHHHH----HHHHHhhhhhhhcCCCe--EEehHHHH
Confidence 66778888888888888867 77776 2221212333334443444444 55555555555554444 44555554
Q ss_pred HHHHHH
Q 018113 207 FLAIGM 212 (360)
Q Consensus 207 ~~~~~~ 212 (360)
+..+..
T Consensus 163 ~~~l~~ 168 (433)
T PF03092_consen 163 LPLLML 168 (433)
T ss_pred HHHHHH
Confidence 444443
No 195
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.82 E-value=5.9e-07 Score=83.97 Aligned_cols=90 Identities=12% Similarity=0.212 Sum_probs=70.2
Q ss_pred HHHHHHHH-hhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHH--h--cchHHHHHHHH
Q 018113 58 PYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK--H--SPQYKILMIGR 131 (360)
Q Consensus 58 ~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~--~--~~~~~~l~~~r 131 (360)
.+.|.+.+ .+|.++.+.|.......++..++.++.|++.||+|||+.+..+..+.+++. +.. . ..+.+.+....
T Consensus 276 ~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (485)
T TIGR00711 276 YLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQ 355 (485)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHH
Confidence 34565555 579999999999888888888999999999999999999999888877766 433 2 23456667778
Q ss_pred HHHHhHhhhhhhhhhh
Q 018113 132 ILGGIATSLLFSAFES 147 (360)
Q Consensus 132 ~l~G~~~~~~~~~~~~ 147 (360)
++.|++.+...+....
T Consensus 356 ~l~g~g~~~~~~~~~~ 371 (485)
T TIGR00711 356 FIRGFGMGCFFMPLTT 371 (485)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8899998887665534
No 196
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.82 E-value=6.4e-07 Score=83.96 Aligned_cols=120 Identities=21% Similarity=0.089 Sum_probs=82.6
Q ss_pred HHHH-HHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHh---cchHHHHHHHHHH
Q 018113 59 YVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH---SPQYKILMIGRIL 133 (360)
Q Consensus 59 ~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~---~~~~~~l~~~r~l 133 (360)
+.|. +++.+|.|+.+.|.......++..+++++.|++.||+|+|+.+..+.++.+++. +... .++.+......++
T Consensus 281 ~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 360 (495)
T PRK14995 281 LMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMAL 360 (495)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 3444 455689999999999988888888999999999999999999888888777665 3322 2455566777889
Q ss_pred HHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHh
Q 018113 134 GGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSG 183 (360)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~ 183 (360)
.|++.+...+.... .+.+. ++++...+ ..+....+|..+|..+.+
T Consensus 361 ~G~g~g~~~~~~~~-~~~~~~~~~~~g~~~~----~~~~~~~lG~~~G~ai~g 408 (495)
T PRK14995 361 LGFSAASALLASTS-AIMAAAPPEKAAAAGA----IETMAYELGAGLGIAIFG 408 (495)
T ss_pred HHHhHHHHHHHHHH-HHHhcCCHHhcchHHH----HHHHHHHHHHHHHHHHHH
Confidence 99999888766644 33332 44555333 333333444444444443
No 197
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.81 E-value=5.4e-07 Score=93.29 Aligned_cols=106 Identities=14% Similarity=0.123 Sum_probs=81.6
Q ss_pred HHHHHHhhCCChh-hhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhH
Q 018113 60 VYYLYSTYGFGKG-EIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIA 137 (360)
Q Consensus 60 ~~~~~~~~g~s~~-~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~ 137 (360)
.+++.+++|.+.. +.|++.+...++..+++++.|+++||+++|+.+.++.+..+++. +..+.++.+.+++..++.|++
T Consensus 256 ~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 335 (1146)
T PRK08633 256 PAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFS 335 (1146)
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 3444567899998 89999888888888899999999999999999888888777766 556677888888888999999
Q ss_pred hhhhhhhhhhHHhhhc---cccchhhHHHHHH
Q 018113 138 TSLLFSAFESWLVAEH---NKRGFEQQWLSIT 166 (360)
Q Consensus 138 ~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~ 166 (360)
.+...+.... ++.+. +.|+...+.....
T Consensus 336 ~~~~~~~~~~-~~~~~~p~~~rg~~~~~~~~~ 366 (1146)
T PRK08633 336 AGLFIVPLNA-LIQFRAPEKELGKVLAANNFL 366 (1146)
T ss_pred HHHhhHHHHH-HHhhcCCccchhhhhHHHHHH
Confidence 8887766644 66554 5566654444333
No 198
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.76 E-value=5.3e-07 Score=79.72 Aligned_cols=142 Identities=21% Similarity=0.265 Sum_probs=87.4
Q ss_pred hhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhh----hhcchHHHHHHHHHHH-HHH-HHHhcchHH--
Q 018113 54 WLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD----KQGRKRACVTYCLTYI-LSC-ITKHSPQYK-- 125 (360)
Q Consensus 54 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~D----r~Grr~~l~~~~~~~~-~~~-l~~~~~~~~-- 125 (360)
..+..+++++.++.|++....+.+-..+-+.+.+.+|+.|..+| ||||||.++....... ++. +..++.+..
T Consensus 49 A~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~ 128 (498)
T KOG0637|consen 49 ALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLL 128 (498)
T ss_pred HHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHH
Confidence 33457788888999999998888888888889999999999999 5899988877665544 355 555544333
Q ss_pred ---------------HHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccch-hhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 018113 126 ---------------ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGF-EQQWLSITFSKAIFLGNGLVAILSGLFG 186 (360)
Q Consensus 126 ---------------~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~-~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 186 (360)
.++++--+.=++....+..+.+ ++.|. +++.+ .. +.++....+|+.+|..+++
T Consensus 129 lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra-~L~Dl~~~d~~~~~An----s~f~~f~avGnvLGY~~g~--- 200 (498)
T KOG0637|consen 129 LGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRA-LLADLARGDAKKTRAN----SVFSFFMAVGNVLGYALGS--- 200 (498)
T ss_pred hcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHH-HHHHhccChhhhhccc----hhHHHHHHhcceeeeeccc---
Confidence 2333334444455566666655 77765 22222 23 3344444444444444443
Q ss_pred hhhhcccCCCCchhhhhhHHHH
Q 018113 187 NLLVDSFSLGPVAPFDAAACFL 208 (360)
Q Consensus 187 ~~l~~~~~~~~~~~~~~~~~~~ 208 (360)
+.+|+-..+|.....+.
T Consensus 201 -----y~~~~~~~~Ft~~~~~~ 217 (498)
T KOG0637|consen 201 -----YLGLYKIFPFTLTTACD 217 (498)
T ss_pred -----ccCceEEeehHHHHHHH
Confidence 24455555565444333
No 199
>TIGR00895 2A0115 benzoate transport.
Probab=98.75 E-value=3.8e-07 Score=82.73 Aligned_cols=101 Identities=16% Similarity=0.086 Sum_probs=74.5
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHHHH-HhcchHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCIT-KHSPQYKILMIGRILGG 135 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l~-~~~~~~~~l~~~r~l~G 135 (360)
..+.|.+.+++|.++.+.+...+...++..++.++.|++.||+|||+......+......+. ...++.+......++.|
T Consensus 270 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 349 (398)
T TIGR00895 270 TNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAG 349 (398)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 34577888899999999999988888888899999999999999995544433333333333 33566677778889999
Q ss_pred hHhhhhhhhhhhHHhhhc---cccch
Q 018113 136 IATSLLFSAFESWLVAEH---NKRGF 158 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~ 158 (360)
++.+...+.... ++.|. ++|+.
T Consensus 350 ~~~~~~~~~~~~-~~~~~~~~~~~g~ 374 (398)
T TIGR00895 350 FFVNGGQSGLYA-LMALFYPTAIRAT 374 (398)
T ss_pred HHHHHHHHHHHH-HHhhcCCHHHHHH
Confidence 998888777645 66765 44555
No 200
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.74 E-value=6e-07 Score=83.63 Aligned_cols=127 Identities=13% Similarity=0.109 Sum_probs=78.3
Q ss_pred HHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHH---h--cchHHHHHHHH
Q 018113 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK---H--SPQYKILMIGR 131 (360)
Q Consensus 58 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~---~--~~~~~~l~~~r 131 (360)
.+.+++.++..-+.+..+.+.+...+...++.++.++++||+|+|+.+..+..+..++. ... + .++.+.+++.-
T Consensus 252 ~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 331 (473)
T PRK10429 252 GFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAG 331 (473)
T ss_pred hheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHH
Confidence 33344444444455566666666666677788889999999999999988887666544 221 1 34556667777
Q ss_pred HHHHhHhhhhhhhhhhHHhhhc------cccchhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 018113 132 ILGGIATSLLFSAFESWLVAEH------NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (360)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~------~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 185 (360)
++.|++.+...+...+ +++|. +...+..+...+..+...-+|.++++.+.+.+
T Consensus 332 ~l~g~~~~~~~~~~~a-m~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~ 390 (473)
T PRK10429 332 ILLNIGTALFWVLQVI-MVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVV 390 (473)
T ss_pred HHHHHHHHHHHHHHHH-HHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888887766544 66654 11112333444555555555555555554443
No 201
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.74 E-value=4e-06 Score=72.27 Aligned_cols=146 Identities=15% Similarity=0.076 Sum_probs=96.1
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhh-cchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILG 134 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~ 134 (360)
...+|.+..|.|+|..+.|.+.+...+.....+.....+++|. ++|+..+...+.+.++. .+.+.+.-..++- -++.
T Consensus 228 ~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~ll 306 (395)
T COG2807 228 IGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLL 306 (395)
T ss_pred HHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHH
Confidence 4559999999999999999999999888888888888888865 56666666666666666 3345443332222 4899
Q ss_pred HhHhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHH
Q 018113 135 GIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLA 209 (360)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 209 (360)
|+|.|..++.+.. ++.+..+.... ...........|+ +-+..+|.+.+.+.|..| +|..+........+
T Consensus 307 G~G~G~~F~laL~-li~~rs~~a~~---Aa~LSgmaQg~GY-llAa~GP~l~G~lhDa~g-sw~~~~~~l~~~~i 375 (395)
T COG2807 307 GLGQGGAFPLALT-LILLRSSDAAI---AAALSGMAQGVGY-LLAAFGPWLFGFLHDATG-SWSAPLVLLALATL 375 (395)
T ss_pred hCccchHHHHHHH-HHHhhcCChHH---HHHHHHHhhhhhH-HHHhhhhhhHhHHHHhcC-ChHHHHHHHHHHHH
Confidence 9999999998866 66665222221 1122333334555 334567778887777544 45555544444333
No 202
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.72 E-value=1.8e-06 Score=79.67 Aligned_cols=156 Identities=12% Similarity=-0.011 Sum_probs=80.9
Q ss_pred HHHHHHHHh-hCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHH---HHH-HHh--cchHHHHHHH
Q 018113 58 PYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL---SCI-TKH--SPQYKILMIG 130 (360)
Q Consensus 58 ~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~---~~l-~~~--~~~~~~l~~~ 130 (360)
.+.|.+.++ .|.++.+.++......+.+.++.+..|+++||+|+|+....+...... +.+ ... ..+.+.....
T Consensus 272 ~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (438)
T TIGR00712 272 DWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMIC 351 (438)
T ss_pred HhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHH
Confidence 456666654 799999999888888888888889999999999754322233222211 221 112 1233333334
Q ss_pred HHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHH
Q 018113 131 RILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACF 207 (360)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 207 (360)
.+..|.+........ .....|. ++|+...+..+.. ++..+..++|.+.+.+.++.+ +...+......
T Consensus 352 ~~~~g~~~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~-------~~~gg~~~gp~l~G~l~~~~g--~~~~~~~~~~~ 421 (438)
T TIGR00712 352 MIVIGFLIYGPVMLI-GLHALELAPKKAAGTAAGFTGLF-------GYLGGSVAASAIVGYTVDFFG--WDGGFMVMIGG 421 (438)
T ss_pred HHHHHHHHccHHHHH-HHHHHHhcChhheeeehhhhchH-------HHhhhhhhcchhHHHHHHhcc--chHHHHHHHHH
Confidence 444554322211111 1133443 4566644333222 221223455666666666545 44555555554
Q ss_pred HHHHHHHHhhhhcccc
Q 018113 208 LAIGMVIILSSWTENY 223 (360)
Q Consensus 208 ~~~~~~~~~~~~~~~~ 223 (360)
.+++........+|++
T Consensus 422 ~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 422 SILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHHHHHHHHhhcc
Confidence 4444444444555543
No 203
>PRK11462 putative transporter; Provisional
Probab=98.69 E-value=6.8e-06 Score=76.20 Aligned_cols=123 Identities=8% Similarity=-0.062 Sum_probs=66.2
Q ss_pred HHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcc--hHHHHHHHHHHHHhHh
Q 018113 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSP--QYKILMIGRILGGIAT 138 (360)
Q Consensus 62 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~--~~~~l~~~r~l~G~~~ 138 (360)
++.+...-++...+.+.....+...++.+++++++||+|+|+.+..+....++.. +..+.+ +...+.+.-++.|++.
T Consensus 253 y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 332 (460)
T PRK11462 253 YYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLH 332 (460)
T ss_pred hhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH
Confidence 3334333334444555666667777788889999999999998776555444422 322222 2223444456667776
Q ss_pred hhhhhhhhhHHhhhc------cccchhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 018113 139 SLLFSAFESWLVAEH------NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (360)
Q Consensus 139 ~~~~~~~~~~~i~~~------~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 185 (360)
+...+...+ +++|. +...+..+...+..+...-+|.++|..+++.+
T Consensus 333 ~~~~~l~~~-m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~i 384 (460)
T PRK11462 333 QLVTPIQWV-MMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWM 384 (460)
T ss_pred HHHHHHHHH-HHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655444333 44443 11122223333444445556666666555443
No 204
>TIGR00898 2A0119 cation transport protein.
Probab=98.68 E-value=2e-06 Score=80.86 Aligned_cols=145 Identities=14% Similarity=-0.005 Sum_probs=80.4
Q ss_pred HHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchH--HHHHHHHHHHHhHhhh
Q 018113 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQY--KILMIGRILGGIATSL 140 (360)
Q Consensus 64 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~--~~l~~~r~l~G~~~~~ 140 (360)
.++++.+......+. .+....+.++.+++.||+|||+.+..+.++.+++. +..+.++. +......++.+++.+.
T Consensus 350 ~~~~~~~~~~~~~~~---~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (505)
T TIGR00898 350 LGNLGGNIYLDLFIS---GLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITS 426 (505)
T ss_pred ccccCCChHHHHHHH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHH
Confidence 345555533333322 33344556678999999999999999988888766 44554433 4444555666666666
Q ss_pred hhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHhh
Q 018113 141 LFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILS 217 (360)
Q Consensus 141 ~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (360)
.++.. ..+..|. +.|+...+..... + .+|.+++|.+.+ +.+ .++..++.+.+...++..+.. .
T Consensus 427 ~~~~~-~~~~~e~~p~~~r~~~~g~~~~~-------~-~ig~~i~p~i~~-~~~---~~~~~~~~~~~~~~~~~~~~~-~ 492 (505)
T TIGR00898 427 AFQMV-YLYTAELYPTVVRNLGVGVCSTM-------A-RVGSIISPFLVY-LGE---KWLFLPLVLFGGLALLAGILT-L 492 (505)
T ss_pred HHHHH-HHHhcccccHHHHhhhHhHHHHH-------H-HHHHHHHhHHHH-HHH---HHHhhHHHHHHHHHHHHHHHH-H
Confidence 65655 3377775 4455533322222 2 255556665555 222 123345555555544444444 4
Q ss_pred hhccccCC
Q 018113 218 SWTENYGD 225 (360)
Q Consensus 218 ~~~~~~~~ 225 (360)
..||++++
T Consensus 493 ~lpet~~~ 500 (505)
T TIGR00898 493 FLPETKGV 500 (505)
T ss_pred cCcCCCCC
Confidence 55666543
No 205
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.68 E-value=2.5e-05 Score=74.78 Aligned_cols=153 Identities=16% Similarity=0.186 Sum_probs=101.0
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhh-hcchHHHHHHHHHHHHHH-HHHhcch--------HHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILSC-ITKHSPQ--------YKI 126 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~-l~~~~~~--------~~~ 126 (360)
..+..++.+.+|.+.++...++........+.+.++|.++|+ +||++.+..+.++..++. +.+++.. ...
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 445566777899999988888888877788888899999996 599999999999988887 5444311 223
Q ss_pred HHHHHHHHHhHhhhhhhhhhhHHhhhc-cc--cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccc-----CCCCc
Q 018113 127 LMIGRILGGIATSLLFSAFESWLVAEH-NK--RGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF-----SLGPV 198 (360)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~--r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~-----~~~~~ 198 (360)
.+++-.+..+|.|+.-++..+ ...|. ++ +.. ....++..+..++ +|+.++..+..++.+.. .++|.
T Consensus 88 ~l~gLaLia~G~GgiKp~vsa-f~gdqf~~~~~~~----~~s~F~~fY~~iN-iGSlis~~i~~~l~~~~~~fg~~~~~~ 161 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSA-FGGDQFEERQLSL----RSRFFSFFYFAIN-AGSLISTIITPILRGDVGCFGCQDCYP 161 (654)
T ss_pred HHHHHHHHHhhccccccCchh-hhHhhcCccchhH----HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhcccccCcchH
Confidence 556677778888888777744 77764 22 222 2234444444444 55565555555543221 13466
Q ss_pred hhhhhhHHHHHHHHHHH
Q 018113 199 APFDAAACFLAIGMVII 215 (360)
Q Consensus 199 ~~~~~~~~~~~~~~~~~ 215 (360)
..|.+.+++.+++.+..
T Consensus 162 ~aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 162 LAFGVPAILMILALIVF 178 (654)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77777776666655554
No 206
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.66 E-value=8.9e-06 Score=73.94 Aligned_cols=91 Identities=14% Similarity=0.070 Sum_probs=59.6
Q ss_pred HHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHH-HH-HHHh--cchHHHHHHHHHHHHhH
Q 018113 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SC-ITKH--SPQYKILMIGRILGGIA 137 (360)
Q Consensus 62 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~-~~-l~~~--~~~~~~l~~~r~l~G~~ 137 (360)
.+.+.+|.++.+.+........+..+++.+.+++.||+|++............ .. .... ..+.+.+.....+.|++
T Consensus 233 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 312 (394)
T PRK11652 233 LMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFG 312 (394)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 33345899999999888777777777878889999999844333222222221 11 1122 34556677788899999
Q ss_pred hhhhhhhhhhHHhhhc
Q 018113 138 TSLLFSAFESWLVAEH 153 (360)
Q Consensus 138 ~~~~~~~~~~~~i~~~ 153 (360)
.+...+...+ +..|.
T Consensus 313 ~~~~~~~~~~-~~~~~ 327 (394)
T PRK11652 313 AGMLFPLATS-GAMEP 327 (394)
T ss_pred HHHHHHHHHH-HHHhh
Confidence 8888787755 55554
No 207
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.66 E-value=4e-06 Score=78.05 Aligned_cols=151 Identities=13% Similarity=-0.002 Sum_probs=81.9
Q ss_pred HHHHHHH-HhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHH--------HHHHHHH--HHHH-HHHh-cchH
Q 018113 58 PYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRAC--------VTYCLTY--ILSC-ITKH-SPQY 124 (360)
Q Consensus 58 ~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l--------~~~~~~~--~~~~-l~~~-~~~~ 124 (360)
.++|.+. +++|.+..+.|...+...++..+++++.|+++||+++|+.. ..+.... ++.. .... ..+.
T Consensus 282 ~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (465)
T TIGR00894 282 TYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAF 361 (465)
T ss_pred HHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCch
Confidence 4466655 56899999999999999998999999999999998755321 1111111 1111 1122 2333
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCC-Cchhhhh
Q 018113 125 KILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLG-PVAPFDA 203 (360)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~-~~~~~~~ 203 (360)
...++.-.+.+.+.+...+.... ...|..++ . .....+.. +....+++.++|.+.+.+.+..+++ |...|.+
T Consensus 362 ~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~--~---~g~~~g~~-~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~ 434 (465)
T TIGR00894 362 YLTIIILTLANAVSSGPLAGVLI-NSLDLAPR--F---LGFIKGIT-GLPGFIGGLIASTLAGNILSQDSKNVWLIVFLI 434 (465)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhh-chhhcChh--H---HHHHHHHH-HHHHHHHHHHHHHhhheeeCCCCchHHHHHHHH
Confidence 33344444444444433332211 22232222 1 22223322 2333477788888877766644333 6667776
Q ss_pred hHHHHHHHHHHH
Q 018113 204 AACFLAIGMVII 215 (360)
Q Consensus 204 ~~~~~~~~~~~~ 215 (360)
.+...++..++.
T Consensus 435 ~~~~~~i~~i~~ 446 (465)
T TIGR00894 435 MAFVNILCVIFY 446 (465)
T ss_pred HHHHHHHHHHHe
Confidence 666665555444
No 208
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.65 E-value=2.2e-06 Score=76.32 Aligned_cols=102 Identities=25% Similarity=0.285 Sum_probs=76.9
Q ss_pred hhHHHHHH-HHhhCCC-hhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HH---HhcchHHHHHH
Q 018113 56 QGPYVYYL-YSTYGFG-KGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT---KHSPQYKILMI 129 (360)
Q Consensus 56 ~~~~~~~~-~~~~g~s-~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~---~~~~~~~~l~~ 129 (360)
...+.|.+ .+++|.+ ..+.+.......+.+.+++++.|++.||+|+|+..........+.. .. ...++....+.
T Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (352)
T PF07690_consen 225 FSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLII 304 (352)
T ss_dssp HHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHH
T ss_pred hhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 34556665 7889999 7889988999888888889999999999999887777766666544 22 33445677777
Q ss_pred HHHHHHhHhhhhhhhhhhHHhhhc---cccch
Q 018113 130 GRILGGIATSLLFSAFESWLVAEH---NKRGF 158 (360)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~ 158 (360)
.-++.|++.+...+.... ++.|. ++|++
T Consensus 305 ~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~g~ 335 (352)
T PF07690_consen 305 ALFLIGFGFGIVFPILFS-LIQELVPPEYRGT 335 (352)
T ss_dssp HHHHHHHHHHHHCHHHHH-HHHCCCHTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHhCCHHHHHH
Confidence 888899988888777755 66665 44555
No 209
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.64 E-value=4.4e-06 Score=76.22 Aligned_cols=159 Identities=18% Similarity=0.107 Sum_probs=93.9
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHh----cchH--H---H
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH----SPQY--K---I 126 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~----~~~~--~---~ 126 (360)
.-|...+.++-|++..+..++.........+...++..+.||+|||+.++.+..+..+.. +... .+.. + .
T Consensus 290 ~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~ 369 (485)
T KOG0569|consen 290 FFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYL 369 (485)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 345778889999999999888888888888888899999999999999999998887754 3221 1112 1 1
Q ss_pred HHHHHHHHHhHhhhhh-hhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhh
Q 018113 127 LMIGRILGGIATSLLF-SAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFD 202 (360)
Q Consensus 127 l~~~r~l~G~~~~~~~-~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~ 202 (360)
.+++.++..++.+.-. |.. .-+.+|. +.|....+..... ..+++.+-...-+.+-.. ++. +.|.
T Consensus 370 ~i~~~~~~~~~f~~G~gpi~-~fi~aELf~~~~R~aa~s~~~~~----~w~~~fiv~~~fp~l~~~------~g~-~~fi 437 (485)
T KOG0569|consen 370 CIAAIFLFIISFAIGPGPIP-WFIGAELFPQSARSAAQSVATAV----NWLSNFIVGFAFPPLQNV------IGP-YVFI 437 (485)
T ss_pred HHHHHHHHHHhhhcCCCchh-HHHHHHhCCccchHHHHHHHHHH----HHHHHHHHHHHHHHHHHH------hcc-hhhH
Confidence 2333344443333331 222 3246776 3343322222222 222222222222333222 222 4455
Q ss_pred hhHHHHHHHHHHHhhhhccccCCCC
Q 018113 203 AAACFLAIGMVIILSSWTENYGDPS 227 (360)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (360)
...+.+.+..+..+...||+++++.
T Consensus 438 lF~i~~~~~~i~~~~~lPETkgr~~ 462 (485)
T KOG0569|consen 438 LFVIPLAIFLIYLYRYLPETKGRTP 462 (485)
T ss_pred HHHHHHHHHHHHHHHhCcccCCCCH
Confidence 5566666666677688899987654
No 210
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.63 E-value=1.7e-06 Score=71.91 Aligned_cols=128 Identities=16% Similarity=0.234 Sum_probs=79.9
Q ss_pred HHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH--HHHhcchHHHHHHHHHHHHhHhh
Q 018113 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC--ITKHSPQYKILMIGRILGGIATS 139 (360)
Q Consensus 62 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~--l~~~~~~~~~l~~~r~l~G~~~~ 139 (360)
..+++||+|+.+.+.+.+..+....+.+++.|.++||+|++-..+.+..+..+.. ...++ .+.-.++..+.|++.+
T Consensus 290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLsys 367 (459)
T KOG4686|consen 290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTFLGLSYS 367 (459)
T ss_pred HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHHhhhHH
Confidence 4567899999999999999999999999999999999999998888877666633 33332 1222334455555433
Q ss_pred ----hhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccC-CCCchhh
Q 018113 140 ----LLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS-LGPVAPF 201 (360)
Q Consensus 140 ----~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~-~~~~~~~ 201 (360)
..+|.. +.++.|. +-|...+..+...+ +|-.+.+++++.+.|..+ +.|.-.|
T Consensus 368 llAcslWP~v-a~~vpE~-qLGTaygf~qsIqN--------Lgla~i~Iiag~i~d~~g~y~~le~f 424 (459)
T KOG4686|consen 368 LLACSLWPCV-ASLVPEE-QLGTAYGFIQSIQN--------LGLAFIPIIAGFIADGDGSYDNLEAF 424 (459)
T ss_pred HHHHHHhhhh-hhhCCHH-HhcchHHHHHHHHh--------hhhhHHhhhhheeecCCCchhhHHHH
Confidence 245555 3255554 33443333333333 444555555565555444 4443333
No 211
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.57 E-value=2.3e-06 Score=80.45 Aligned_cols=156 Identities=14% Similarity=0.019 Sum_probs=77.7
Q ss_pred HHHHHHhhCCChhhhHH------------HHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhc----c
Q 018113 60 VYYLYSTYGFGKGEIGQ------------LFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS----P 122 (360)
Q Consensus 60 ~~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~----~ 122 (360)
.|.+.++.|.+..+.+. ......++..++..+.++++||+|||+.++.+..+.+++. +..+. +
T Consensus 311 ~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~ 390 (502)
T TIGR00887 311 QKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLS 390 (502)
T ss_pred cHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 67777888887543211 1122223333455678999999999999988887776654 33321 1
Q ss_pred hHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccc------
Q 018113 123 QYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF------ 193 (360)
Q Consensus 123 ~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~------ 193 (360)
+...+...-+...++.....+.. ..+.+|. +.|+...+... ..+. ++..+++.+.+.+.+..
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~E~~p~~~R~~~~g~~~-------~~~~-~~~~~~~~~~~~l~~~~~~~~~~ 461 (502)
T TIGR00887 391 THGFLAIYVLAQFFANFGPNATT-FIVPGEVFPTRYRSTAHGISA-------ASGK-AGAIIGQFGFLYLAQHGDPTKGY 461 (502)
T ss_pred hhHHHHHHHHHHHHHhcCCCchh-hhhhhccCchhHHHHHHHHHH-------HHhh-hHHHHHHHHhhhhhccccccccc
Confidence 11111111111111111122322 2255675 44555333322 2222 45555555555555432
Q ss_pred --CCCCchhhhhhHHHHHHHHHHHhhhhccccCC
Q 018113 194 --SLGPVAPFDAAACFLAIGMVIILSSWTENYGD 225 (360)
Q Consensus 194 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (360)
+.+....+.+.+.+.++..+.. ...||++++
T Consensus 462 ~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~~ 494 (502)
T TIGR00887 462 PTGIWMGHVLEIFALFMFLGILFT-LLIPETKGK 494 (502)
T ss_pred cccccchHHHHHHHHHHHHHHHHh-eEeccCCCC
Confidence 1233345555555555554443 456776654
No 212
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.55 E-value=3.5e-05 Score=70.50 Aligned_cols=105 Identities=12% Similarity=0.164 Sum_probs=60.0
Q ss_pred HHHHHH-hhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HH--H---hcchHHHHHHHHH
Q 018113 60 VYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT--K---HSPQYKILMIGRI 132 (360)
Q Consensus 60 ~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~--~---~~~~~~~l~~~r~ 132 (360)
.|.+.+ .+|.++.+.++.......+..+++.+.+.+.+|.++++..........++. +. . ..++++...+..+
T Consensus 241 ~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~ 320 (413)
T PRK15403 241 SPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTS 320 (413)
T ss_pred ChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 565554 569999999998777777677777777776655444444333222222222 11 1 2233434567788
Q ss_pred HHHhHhhhhhhhhhhH-HhhhccccchhhHHHH
Q 018113 133 LGGIATSLLFSAFESW-LVAEHNKRGFEQQWLS 164 (360)
Q Consensus 133 l~G~~~~~~~~~~~~~-~i~~~~~r~~~~~~~~ 164 (360)
+.++|.+...+..... +..+..++|...+...
T Consensus 321 l~~~G~~~~~p~~~~~al~~~~~~~G~a~a~~~ 353 (413)
T PRK15403 321 LYAFGIGLIFPTLFRFTLFSNNLPKGTVSASLN 353 (413)
T ss_pred HHHHHHHHHhHHHHHHHhccCCCCCcHHHHHHH
Confidence 8888888887776431 1222244666444433
No 213
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.54 E-value=7.8e-06 Score=84.65 Aligned_cols=108 Identities=9% Similarity=-0.127 Sum_probs=77.5
Q ss_pred HHHHHH-HhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhc---------------
Q 018113 59 YVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS--------------- 121 (360)
Q Consensus 59 ~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~--------------- 121 (360)
.+|.+. +.+|.++.+.|.+.+...++..+++++.|+++||.++++.+..+.++.++.. ...+.
T Consensus 247 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 326 (1140)
T PRK06814 247 QLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSIL 326 (1140)
T ss_pred HhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchh
Confidence 445554 4589999999999999999899999999999998887776666655554433 23332
Q ss_pred -----chHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHH
Q 018113 122 -----PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITF 167 (360)
Q Consensus 122 -----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~ 167 (360)
++.+.+.+..++.|++.+...+...+ ++.+. +.||+..+..+...
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~p~~~~G~v~g~~~~~~ 379 (1140)
T PRK06814 327 VFLSKRHGWRILIDLFGLAAAGGLYIVPLFA-ALQAWANPAHRARVIAANNVLN 379 (1140)
T ss_pred hhhcccccHHHHHHHHHHHHHHHHhHHHHHH-HHHhhCCcccceeeeHHHHHHH
Confidence 66777788888999998888776645 65554 66777555544433
No 214
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.54 E-value=7e-06 Score=75.10 Aligned_cols=60 Identities=10% Similarity=-0.008 Sum_probs=44.2
Q ss_pred hHHHHHHHHhh--CCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHH-HHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTY--GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRA-CVTYCLTYILSC 116 (360)
Q Consensus 57 ~~~~~~~~~~~--g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~-l~~~~~~~~~~~ 116 (360)
..++|.+.+++ |.+..+.+.......+++.++.++.|+++||++||+. ........+++.
T Consensus 262 ~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~ 324 (412)
T TIGR02332 262 NIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW 324 (412)
T ss_pred HHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH
Confidence 45688888875 5677788888888888888888899999999997775 333333333333
No 215
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.54 E-value=2.3e-05 Score=71.60 Aligned_cols=125 Identities=10% Similarity=0.056 Sum_probs=77.6
Q ss_pred HHHHHHHHhh--CCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHH
Q 018113 58 PYVYYLYSTY--GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILG 134 (360)
Q Consensus 58 ~~~~~~~~~~--g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~ 134 (360)
.+++...++. +.+....+...+.......++..+.|++.||+++|+++.++.....+.. +..+.++... ...-.+.
T Consensus 253 s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~ 331 (410)
T TIGR00885 253 TFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLC 331 (410)
T ss_pred HHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHH
Confidence 4455555554 3344444444555555566777789999999999999888888777766 5556555443 5666788
Q ss_pred HhHhhhhhhhhhhHHhhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc
Q 018113 135 GIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS 192 (360)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~ 192 (360)
|++.+..+|...+ ...+. .+|.+. .+.+...+ .+|..+.|.+.+.+.|.
T Consensus 332 glf~s~~fp~i~s-l~~~~~g~~~~~-------~s~~l~~~-~~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 332 SAFMSLMFPTIYG-IALKGLGQDTKY-------GAAGLVMA-IIGGGIVPPLQGFIIDM 381 (410)
T ss_pred HHHHHHHHHHHHH-HHHhhhhhhhhh-------hHHHHHHH-HhccchHHHHHHHHHHH
Confidence 8888888887756 44433 333221 11111111 26666677777777764
No 216
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.53 E-value=7.7e-06 Score=73.55 Aligned_cols=131 Identities=18% Similarity=0.114 Sum_probs=74.4
Q ss_pred HHHHHH-HHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcc-hHHHHHHHH-HH-HHHHH-HHh--cchHHHHHHH
Q 018113 58 PYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR-KRACVTYCL-TY-ILSCI-TKH--SPQYKILMIG 130 (360)
Q Consensus 58 ~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Gr-r~~l~~~~~-~~-~~~~l-~~~--~~~~~~l~~~ 130 (360)
.+.|.. .+++|.++.+.+...+...++..++.++.|++.||.++ |+....... .. ..+.. ... ..+.....+.
T Consensus 237 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (379)
T TIGR00881 237 DWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLIC 316 (379)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHH
Confidence 344444 45689999999999888888888888999999998643 332222211 11 11221 122 2344555566
Q ss_pred HHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCC
Q 018113 131 RILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGP 197 (360)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~ 197 (360)
.++.|.......+.... +..|. ++|+...+..... ..+|..+++.+.+.+.+..+|++
T Consensus 317 ~~~~g~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~--------~~~g~~~~~~~~g~l~~~~g~~~ 377 (379)
T TIGR00881 317 LFALGFLVYGPQMLIGV-IASELAPKKAAGTAAGFVGFF--------AYLGGILAGLPLGYLADGFGWAG 377 (379)
T ss_pred HHHHHHHHhhhhHHHHH-HHHHhcCcchhHHHHHHHHHh--------hhhhhhhhhhhHHHHHHhhcccc
Confidence 67777654444343322 55554 4455533322222 22555666666666666655553
No 217
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.53 E-value=3.1e-05 Score=69.60 Aligned_cols=103 Identities=9% Similarity=0.057 Sum_probs=58.2
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcc---hHHHHH-HHHHHHHHH-HHHhcchHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR---KRACVT-YCLTYILSC-ITKHSPQYKILMIGR 131 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Gr---r~~l~~-~~~~~~~~~-l~~~~~~~~~l~~~r 131 (360)
...+|.+.++.|.+.. .+.......+.+.++ .++++||.+| |+.... ..+..++.. ..++.++.......-
T Consensus 212 ~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 287 (368)
T TIGR00903 212 AIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFI 287 (368)
T ss_pred HHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHH
Confidence 4457888888888764 566666666656665 4677777654 343332 333333333 334444444444455
Q ss_pred HHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHH
Q 018113 132 ILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLS 164 (360)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~ 164 (360)
.+.|++....++.... +.+|. +.|+...+...
T Consensus 288 ~l~~~~~~~~~~~~~~-~~~~~~p~~~rgt~~G~~~ 322 (368)
T TIGR00903 288 GIAGLLMLPAYAIIMD-WIGKFCDKELHGKAAGAIG 322 (368)
T ss_pred HHHHHhhhhhHHHHHH-HHHHhcchhhcCcccchhh
Confidence 5566665555555433 66775 56777544433
No 218
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.49 E-value=1.1e-05 Score=73.05 Aligned_cols=117 Identities=15% Similarity=0.103 Sum_probs=78.0
Q ss_pred hCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhc--chHHHHHHHHHHHHhHhhhhhh
Q 018113 67 YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS--PQYKILMIGRILGGIATSLLFS 143 (360)
Q Consensus 67 ~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~--~~~~~l~~~r~l~G~~~~~~~~ 143 (360)
.|.++.+..........+..++.++..++++|+|+|+++.++.++..++. +..+. ++...+++..++.+++.+...+
T Consensus 267 lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~ 346 (467)
T COG2211 267 LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANP 346 (467)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhcccc
Confidence 44444455555555555445556789999999999999999999999976 44443 4778888889999999888877
Q ss_pred hhhhHHhhhc------cccchhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 018113 144 AFESWLVAEH------NKRGFEQQWLSITFSKAIFLGNGLVAILSGL 184 (360)
Q Consensus 144 ~~~~~~i~~~------~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 184 (360)
..-+ +++|. +.-.+..+...+.++...=+|.+++..+.++
T Consensus 347 l~wa-m~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~ 392 (467)
T COG2211 347 LPWA-MVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGW 392 (467)
T ss_pred ccHH-HhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6644 65553 2222344445555555555555555544443
No 219
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.44 E-value=1.9e-06 Score=57.83 Aligned_cols=65 Identities=22% Similarity=0.205 Sum_probs=54.7
Q ss_pred HHHHHhhhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHH
Q 018113 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY 112 (360)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~ 112 (360)
+.....+...|++|...++.|+|+.|+|.+.++..+...+.++++|.++||+|+++..+......
T Consensus 11 ~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 11 FYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 33344455579999999999999999999999999999999999999999999988877765543
No 220
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.39 E-value=2.1e-05 Score=73.24 Aligned_cols=147 Identities=19% Similarity=0.140 Sum_probs=103.3
Q ss_pred HHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcc--hHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHH
Q 018113 59 YVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR--KRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (360)
Q Consensus 59 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Gr--r~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (360)
++|...++.+.+..+.+.+.+...+...++-++.|+++|+... +.+..++.+..+++. .+.+.+++..+...-.+.|
T Consensus 320 ~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG 399 (509)
T KOG2504|consen 320 YLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFG 399 (509)
T ss_pred HHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 3888999999999999999999999899999999999999983 444555555556655 6788999999999999999
Q ss_pred hHhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHH
Q 018113 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (360)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 212 (360)
+..|...... +.++.|.-.-.+ ....++ ...+..+++.+++|.+++.+.|..+ ++...|...+...+++.
T Consensus 400 ~~~g~~~~l~-~~i~~~~~g~~~----l~~a~G-l~l~~~gi~~l~gpPiag~~~d~tg-~Y~~~f~~~g~~~~~s~ 469 (509)
T KOG2504|consen 400 FCVGSFSSLT-PVILVDLVGLEK----LSNAYG-LLLLFQGIGALVGPPIAGLLYDITG-NYDHAFYFCGLCFLLSA 469 (509)
T ss_pred HHHHHHHHHH-HHHHHHHcChhh----cchHHH-HHHHHhHHHHHcCcccceeeeeccC-CeeeehhhcChHHHHHH
Confidence 9988875554 435555411111 112233 2233455888889998888777655 24445555544444333
No 221
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.37 E-value=3.9e-06 Score=73.11 Aligned_cols=138 Identities=18% Similarity=0.138 Sum_probs=88.4
Q ss_pred HHHHH-HHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHH--HHHHHHHH-HHHhcchHHHHHHHHHH
Q 018113 58 PYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTY--CLTYILSC-ITKHSPQYKILMIGRIL 133 (360)
Q Consensus 58 ~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~--~~~~~~~~-l~~~~~~~~~l~~~r~l 133 (360)
|.++. +.|++..+..++|..+.-..+...++..+.|.++||++..+.+... .+..+..+ ...+++++..+++-++.
T Consensus 291 Ptlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~ 370 (464)
T KOG3764|consen 291 PTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFG 370 (464)
T ss_pred cccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHH
Confidence 55444 5567776666999888888888889999999999999954444433 33334344 55788999999998888
Q ss_pred HHhHhhhhhhhhhhHH--hhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCc
Q 018113 134 GGIATSLLFSAFESWL--VAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPV 198 (360)
Q Consensus 134 ~G~~~~~~~~~~~~~~--i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~ 198 (360)
.|++.+.......+.+ +.|. +..+.- ... ......-.+..+|..++|.+++.+.+..|+.|.
T Consensus 371 l~~~i~~~dasl~P~l~~lvd~rh~s~~~--vYG-sVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl 435 (464)
T KOG3764|consen 371 LGFGIGLADASLIPTLGYLVDPRHVSGFN--VYG-SVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWL 435 (464)
T ss_pred HHHHHHHHHHHHhhhhHHhcchhhccccc--eee-eHHHHHHHHHHHhhhccccccchheeehhHHHH
Confidence 8888777766555522 2222 222110 111 111222234456677788888888777676664
No 222
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.33 E-value=0.0011 Score=60.91 Aligned_cols=58 Identities=10% Similarity=-0.122 Sum_probs=41.0
Q ss_pred HHHHHHHhhCCC-----hhhhHHHHHHHHHHHhhh-hhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 018113 59 YVYYLYSTYGFG-----KGEIGQLFIAGFGSSMLF-GTIVGSLADKQGRKRACVTYCLTYILSC 116 (360)
Q Consensus 59 ~~~~~~~~~g~s-----~~~~g~~~~~~~~~~~~~-~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 116 (360)
.+-++.+.+.++ ...+.++.+...+...+. .++.+++++|++|++++-.....+..-.
T Consensus 25 iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f 88 (472)
T TIGR00769 25 ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFF 88 (472)
T ss_pred HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHH
Confidence 344566666663 346677777776655555 6789999999999999888766665543
No 223
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.32 E-value=8.2e-05 Score=64.44 Aligned_cols=96 Identities=25% Similarity=0.371 Sum_probs=75.0
Q ss_pred hHHHHHHHHhhCCCh--hhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcch--HHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGK--GEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQ--YKILMIGR 131 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~--~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~--~~~l~~~r 131 (360)
.+..+...++++.+. .+.+...+...+...+..++.|.++||+|||+.+..+......+. +..+.++ .+.+.+.|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (338)
T COG0477 22 SPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILR 101 (338)
T ss_pred HHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 455777778877666 477888888888777877899999999999988888876644444 5555554 88999999
Q ss_pred HHHHhHhhhhhhhhhhHHhhhc
Q 018113 132 ILGGIATSLLFSAFESWLVAEH 153 (360)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~ 153 (360)
+.+|++.+...+.... ++.|.
T Consensus 102 ~~~g~~~~~~~~~~~~-~~~~~ 122 (338)
T COG0477 102 LLQGLGGGGLLPVASA-LLSEW 122 (338)
T ss_pred HHHHhhhHHHHHHHHH-HHHHh
Confidence 9999999888777755 77776
No 224
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.31 E-value=3e-05 Score=69.59 Aligned_cols=59 Identities=17% Similarity=0.239 Sum_probs=46.5
Q ss_pred HHHHHHH-HhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 018113 58 PYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC 116 (360)
Q Consensus 58 ~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 116 (360)
.+.|.+. +++|.++.+.+...+...+.+.++.++.|+++||+|||+.+..+......+.
T Consensus 246 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~ 305 (366)
T TIGR00886 246 SIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGA 305 (366)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHH
Confidence 3344444 5689999999988888888888888899999999999988877766665544
No 225
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.29 E-value=1.2e-05 Score=74.67 Aligned_cols=117 Identities=16% Similarity=0.064 Sum_probs=79.5
Q ss_pred HhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHH-h---------cchHHHHHHHHHH
Q 018113 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK-H---------SPQYKILMIGRIL 133 (360)
Q Consensus 65 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~-~---------~~~~~~l~~~r~l 133 (360)
++.|.++.+.|.+.....++..++....+++.+|++.|+++.++.++.+++. ... . .++.+.+....++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 5789999999999888888888888899999999999999999999888865 221 1 1333345556678
Q ss_pred HHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 018113 134 GGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (360)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 186 (360)
.+++.+..+..... ++.+. +.++...+...+.. ++|..++..+++.+.
T Consensus 361 ~~~~~g~~~~~~~~-~~~~~~p~~~egt~~al~~s~~----~lg~~v~~~~gg~l~ 411 (468)
T TIGR00788 361 AEVLAQLKFMPFLV-LLARLCPSGCESSVFALLASIL----HLGSSVSGFLGVLLM 411 (468)
T ss_pred HHHHHHHHHccHHH-HHHHhCCCCceehHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 88887777666644 66665 44555444444333 344444444444333
No 226
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.24 E-value=0.00018 Score=65.37 Aligned_cols=76 Identities=16% Similarity=0.090 Sum_probs=60.8
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhcc
Q 018113 78 FIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHN 154 (360)
Q Consensus 78 ~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~ 154 (360)
..+-+....+.+.+.+.+.|+.|.|..++++......--+..+-+|-+.++.+..+.|+|.+..+..... +++|+.
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~GqG~-ylt~~s 131 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQGG-YLTSNS 131 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheecccce-ehhhcC
Confidence 4555555667777899999999999999999888877555555567778899999999999988777745 888873
No 227
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.20 E-value=9.2e-06 Score=55.03 Aligned_cols=71 Identities=14% Similarity=0.143 Sum_probs=63.3
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKIL 127 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l 127 (360)
+|.+|.+.+|.++|.++.|++.+..+++..++++...++.++..+++.+..+.+...+.. .+++.++.+.+
T Consensus 12 TplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 12 TPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred HhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 688999999999999999999999999999999999999999888888999988888877 78887776654
No 228
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.19 E-value=0.00086 Score=59.46 Aligned_cols=174 Identities=21% Similarity=0.196 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHhhhhhHH-HHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhh-hhcchHHHHHHHHHHHHHH-H
Q 018113 41 NYLLVYSLMMAGDWLQGPY-VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD-KQGRKRACVTYCLTYILSC-I 117 (360)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~D-r~Grr~~l~~~~~~~~~~~-l 117 (360)
+++...++..+....+-+. -|+=-|-||++..|...+......+..++-...|++.. |.++|+.-.+++....++. +
T Consensus 212 ~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~l 291 (403)
T PF03209_consen 212 RFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFAL 291 (403)
T ss_pred HHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHH
Confidence 3444444444444444333 44555679999999887776666655444446777655 7888888888888877765 2
Q ss_pred ---HHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 018113 118 ---TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD 191 (360)
Q Consensus 118 ---~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~ 191 (360)
.+..++.+.+...-++.|++.|.......+ ..-+. ++.|...+.+...+.....+|..+|..+-........+
T Consensus 292 ii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals-~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~ 370 (403)
T PF03209_consen 292 IILAGPLGSPWLFRPGVFLLGLGNGLFTVGALS-LMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGN 370 (403)
T ss_pred HHHHHhcccchHHHHHHHHHHHhhhHHHHHHHH-HHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 355678889999999999999988776655 33333 45556566555555555444444444333322222111
Q ss_pred ccCCCCchhhhhhHHHHHHHHHHH
Q 018113 192 SFSLGPVAPFDAAACFLAIGMVII 215 (360)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~ 215 (360)
.....+...|.+-+.+.+++.++.
T Consensus 371 ~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 371 SPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHH
Confidence 112233345555555555555444
No 229
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.17 E-value=0.0053 Score=55.90 Aligned_cols=70 Identities=13% Similarity=-0.018 Sum_probs=41.9
Q ss_pred HHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 240 AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
++..++++.+.. .+...+.+.....+ ...+..|+..+ |.++ +..-+...+.++.+++..+++.+|+|..+
T Consensus 252 w~~Y~~q~vfla-s~alalLY~TVLsf-~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr 324 (432)
T PF06963_consen 252 WRTYFRQPVFLA-SFALALLYFTVLSF-GGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVR 324 (432)
T ss_pred HHHHHhCHHHHH-HHHHHHHHHHHhcC-cHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 344455554433 34444444333332 33444566554 5555 34446667778899999999999999874
No 230
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.17 E-value=0.00027 Score=62.13 Aligned_cols=129 Identities=15% Similarity=0.134 Sum_probs=88.3
Q ss_pred hHHHHHHHHh-hCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHH
Q 018113 57 GPYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILG 134 (360)
Q Consensus 57 ~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~ 134 (360)
..+++.+.+| .|.+..+.+...+....+.+++..+.-++..|+...|.+....+...+-+ ..+++++...+ .+-++.
T Consensus 256 gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~-~~l~~i 334 (422)
T COG0738 256 GSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVAL-YALFLI 334 (422)
T ss_pred HHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHH-HHHHHH
Confidence 5667777777 78888888888888888888888788888889999999888877666655 66777775443 445788
Q ss_pred HhHhhhhhhhhhhHHhhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCC
Q 018113 135 GIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL 195 (360)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~ 195 (360)
|+..+..+|...+ .-.+. .+.... .+ +..+-..+|+.+.|.+.+++.|..+-
T Consensus 335 g~F~simfPTIfs-lal~~l~~~ts~-------~s-~~l~maivGGAiiP~l~G~i~d~~g~ 387 (422)
T COG0738 335 GLFNSIMFPTIFS-LALKNLGEHTSV-------GS-GLLVMAIVGGAIIPPLQGVIADMFGI 387 (422)
T ss_pred HHHhHHHHHHHHH-HHHhccCccccc-------cc-eeeeeheecchHHHHHHHHHHHhhhh
Confidence 9999999998855 43332 211111 11 11112236777778888888776543
No 231
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.10 E-value=2.5e-05 Score=70.83 Aligned_cols=136 Identities=18% Similarity=0.128 Sum_probs=96.0
Q ss_pred HHHhhhhhHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHH
Q 018113 50 MAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILM 128 (360)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~ 128 (360)
.+..++...++..=.||++..+.-.|........+=.+.-++.+++.+|+|+-+++..++...++=. ..++.+|.|+.+
T Consensus 384 G~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vL 463 (618)
T KOG3762|consen 384 GAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVL 463 (618)
T ss_pred HHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchhee
Confidence 3333444555656668888777666744444444444444578899999999999999998888865 678899999999
Q ss_pred HHHHHHHhHhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 018113 129 IGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (360)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 186 (360)
-..+++|+..+..+.+..+ |++...+++...............+|-++|+++|+.+.
T Consensus 464 Pieilqgit~aliWaa~~s-Y~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v 520 (618)
T KOG3762|consen 464 PIEILQGITHALIWAAIIS-YASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVV 520 (618)
T ss_pred eHHHHHHHHHHHHHHHHHH-HHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhh
Confidence 9999999999999999866 88877555554444444455455555555555554443
No 232
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.01 E-value=0.0006 Score=52.66 Aligned_cols=75 Identities=20% Similarity=0.223 Sum_probs=60.0
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc
Q 018113 78 FIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH 153 (360)
Q Consensus 78 ~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~ 153 (360)
.++.+....+..++.+.+.+++|.|+.++++.+...+-...-+-++.+.++.+-.+.|++.+..+++... ++.+.
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~-ylt~~ 117 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGT-YLTSY 117 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhH-HHHHc
Confidence 3444555556666778889999999999999998887555556778889999999999999999888744 87776
No 233
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.93 E-value=0.0012 Score=61.70 Aligned_cols=86 Identities=7% Similarity=-0.138 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHHhhhhhhhh----hhhhh-hcchHHH--HHHHHHHHHHH-HHHh---------cchHHHHHHHHHHHHh
Q 018113 74 IGQLFIAGFGSSMLFGTIVG----SLADK-QGRKRAC--VTYCLTYILSC-ITKH---------SPQYKILMIGRILGGI 136 (360)
Q Consensus 74 ~g~~~~~~~~~~~~~~~~~G----~l~Dr-~Grr~~l--~~~~~~~~~~~-l~~~---------~~~~~~l~~~r~l~G~ 136 (360)
.+++.+...+...+.+++.. ++.|| .+++... .+|.++.+++. ..++ ..|+++++...++.|+
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 45666666666666666544 44554 3334433 67777777766 3332 4688999999999999
Q ss_pred HhhhhhhhhhhHHhhhc---cccchhh
Q 018113 137 ATSLLFSAFESWLVAEH---NKRGFEQ 160 (360)
Q Consensus 137 ~~~~~~~~~~~~~i~~~---~~r~~~~ 160 (360)
|+....|.... ++++. +.||+..
T Consensus 394 ge~~~~p~~~~-~~~~~aP~~~~g~~~ 419 (475)
T TIGR00924 394 GELMISPLGLS-WWTKIAPQRLMGQML 419 (475)
T ss_pred HHHHHhHHHHH-HHHHhCCHHHHHHHH
Confidence 99999998866 76665 4455533
No 234
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.80 E-value=0.0017 Score=61.03 Aligned_cols=84 Identities=13% Similarity=-0.003 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHhhhhhh----hhhhhhhhcchHHHHHHHHHHHHHH-HHHhcch---------HHHHHHHHHHHHhHhhh
Q 018113 75 GQLFIAGFGSSMLFGTI----VGSLADKQGRKRACVTYCLTYILSC-ITKHSPQ---------YKILMIGRILGGIATSL 140 (360)
Q Consensus 75 g~~~~~~~~~~~~~~~~----~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~---------~~~l~~~r~l~G~~~~~ 140 (360)
++..+...+...+.+++ ++++.||++.++.+.++.++.+++. ..+..++ .+++....++.|+|+..
T Consensus 319 ~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~ 398 (500)
T PRK09584 319 EQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELM 398 (500)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHH
Confidence 34444444434444444 4777788888788899999988887 4444433 45788899999999999
Q ss_pred hhhhhhhHHhhhc---cccchh
Q 018113 141 LFSAFESWLVAEH---NKRGFE 159 (360)
Q Consensus 141 ~~~~~~~~~i~~~---~~r~~~ 159 (360)
..|...+ ++.+. +.||+.
T Consensus 399 ~~p~g~s-~~~~~aP~~~rg~~ 419 (500)
T PRK09584 399 ISGLGLA-MVAQLVPQRLMGFI 419 (500)
T ss_pred HhHHHHH-HHHHhCcHHHHHHH
Confidence 9998866 66654 455553
No 235
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.74 E-value=0.0018 Score=59.77 Aligned_cols=153 Identities=16% Similarity=0.096 Sum_probs=82.6
Q ss_pred hHHHHHHHH-hhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcch--------H-HHHHHHHHHHHHH-HHHhcch-H
Q 018113 57 GPYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRK--------R-ACVTYCLTYILSC-ITKHSPQ-Y 124 (360)
Q Consensus 57 ~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr--------~-~l~~~~~~~~~~~-l~~~~~~-~ 124 (360)
..++|...+ -+|.|..+.|.+.+..++...+...++|.++||.-+| | .-.++....++.. ..++.++ .
T Consensus 278 ~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~ 357 (466)
T KOG2532|consen 278 LTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEH 357 (466)
T ss_pred HHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCc
Confidence 455666665 5899999999999999999999999999999988552 2 1222223333333 3344432 1
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-cCCCCchhhhh
Q 018113 125 KILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS-FSLGPVAPFDA 203 (360)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~-~~~~~~~~~~~ 203 (360)
....+.-+..+.+..+........-..+. .|.. .....+.....+. +...++|.+.+.+.+. .--+|+..|++
T Consensus 358 ~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~-apq~----a~~l~g~~~~~~~-~~~~~~P~~vg~~~~~~t~~eW~~VF~i 431 (466)
T KOG2532|consen 358 RLLAVILLTIAIGLSGFNISGFYKNHQDI-APQH----AGFVMGIINFVGA-LAGFIAPLLVGIIVTDNTREEWRIVFLI 431 (466)
T ss_pred chHHHHHHHHHHHHcccchhhhHhhhhhc-cchH----HHHHHHHHHHHHH-HHHHHHHHheeeEeCCCCHHHHHHHHHH
Confidence 11211112222222222122111011111 1111 2223332333333 6677888888777731 11257788988
Q ss_pred hHHHHHHHHHHH
Q 018113 204 AACFLAIGMVII 215 (360)
Q Consensus 204 ~~~~~~~~~~~~ 215 (360)
.+++.++..+..
T Consensus 432 ~a~i~~~~~i~f 443 (466)
T KOG2532|consen 432 AAGILIVGNIIF 443 (466)
T ss_pred HHHHHHHhchhe
Confidence 888777766554
No 236
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.71 E-value=0.00085 Score=62.20 Aligned_cols=60 Identities=12% Similarity=0.147 Sum_probs=48.0
Q ss_pred hHHHHHHHHh-hCCChhhhHHHHHHHHHHHhhhhhhhhhhhhh----hcchHHHHHHHHHHHH-HH
Q 018113 57 GPYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK----QGRKRACVTYCLTYIL-SC 116 (360)
Q Consensus 57 ~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr----~Grr~~l~~~~~~~~~-~~ 116 (360)
..++|.+.++ .|.|..+.+.+.....+++.++.+..|.++|| ..+|........+... +.
T Consensus 293 ~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~ 358 (495)
T KOG2533|consen 293 SYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGA 358 (495)
T ss_pred HHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 4558888887 56899999999899999999999999999999 6677777666666655 53
No 237
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.61 E-value=0.00034 Score=60.86 Aligned_cols=124 Identities=13% Similarity=0.112 Sum_probs=70.2
Q ss_pred HHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhc--chHH--HHHHHHHHHHhHhhhhhhhhhhHHhhhc---c
Q 018113 83 GSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS--PQYK--ILMIGRILGGIATSLLFSAFESWLVAEH---N 154 (360)
Q Consensus 83 ~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~--~~~~--~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~ 154 (360)
+....+.++.+.+.||+|||+.+..+.+++++.. +.... +|.. ++..+|++... .+.++ .+|..|. +
T Consensus 392 laefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg----~fqva-YvYtPEVyPTa 466 (528)
T KOG0253|consen 392 LAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISG----AFQVA-YVYTPEVYPTA 466 (528)
T ss_pred HhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhc----hheEE-EEecCcccchh
Confidence 3355566679999999999999999999998865 33333 2322 33455655433 33333 3355564 4
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHhhhhc-cccC
Q 018113 155 KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWT-ENYG 224 (360)
Q Consensus 155 ~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 224 (360)
-|+...+. +...+- +|+++.|+++-. . +-+-..+..+...+++++.+.. ...| |+++
T Consensus 467 vRatgvGt-------cSsmaR-IggI~~p~iA~~-~---e~s~sl~i~vy~~~~ilagIav-cffPiEtkG 524 (528)
T KOG0253|consen 467 VRATGVGT-------CSSMAR-IGGIFSPVIAMR-A---ELSTSLPIFVYGALFILAGIAV-CFFPIETKG 524 (528)
T ss_pred hhhcchhh-------hhhHHh-hhhhhhhHHHHH-h---ccceeehHHHHHHHHHHHHHHh-eeeeeccCC
Confidence 45543222 222222 677788877722 1 1233355556666666665555 3344 4444
No 238
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.60 E-value=0.0069 Score=56.70 Aligned_cols=103 Identities=8% Similarity=-0.010 Sum_probs=64.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhcchHH-------HHHHHHHHHHHHH-H-----Hhc-----chHHHHHHHHHHHHhH
Q 018113 76 QLFIAGFGSSMLFGTIVGSLADKQGRKRA-------CVTYCLTYILSCI-T-----KHS-----PQYKILMIGRILGGIA 137 (360)
Q Consensus 76 ~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~-------l~~~~~~~~~~~l-~-----~~~-----~~~~~l~~~r~l~G~~ 137 (360)
...+...+...+.+++.|++.||.|+|+. +.+|.++.+++.+ . .++ .+.+++...-++.|+|
T Consensus 313 ~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~G 392 (489)
T PRK10207 313 SFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLG 392 (489)
T ss_pred HHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHH
Confidence 33344445556788888999999999873 6666666655541 1 121 3567777888999999
Q ss_pred hhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHh
Q 018113 138 TSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSG 183 (360)
Q Consensus 138 ~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~ 183 (360)
++...+.... ++.+. +.++. ..+.......+|+.+|..++.
T Consensus 393 e~~~~~~g~~-~~~~~aP~~~~g~----~~g~~~l~~~ig~~lg~~l~~ 436 (489)
T PRK10207 393 ELFISALGLA-MIAALVPQHLMGF----ILGMWFLTQAAAFLLGGYVAT 436 (489)
T ss_pred HHHHhHHHHH-HHHHhChHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 9999888766 55443 33344 333444444455555555543
No 239
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.57 E-value=0.042 Score=47.29 Aligned_cols=94 Identities=19% Similarity=0.203 Sum_probs=62.6
Q ss_pred hhhhhhhhhhhhhcchHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc-----ccc-----
Q 018113 87 LFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-----NKR----- 156 (360)
Q Consensus 87 ~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-----~~r----- 156 (360)
..+.+.+.+..++|-|.++.++...+......-+-+.+..++-.....|++.+..+..-.. |+++. +.|
T Consensus 73 ~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~Skgt-YlT~~g~~ya~~~~~q~~ 151 (390)
T KOG3097|consen 73 DSSMFMPLLIRFLGTKWTMVLAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGT-YLTPMGQNYANQRGEQAG 151 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcchhHHhhccHHHhhccccccccccCcc-eecHHHHHHHHhhhhhcc
Confidence 3334455888999999999988877766554445677888999999999999988776644 76553 334
Q ss_pred ----chhhHHHHHHHHHHHHHHHHHHHHH
Q 018113 157 ----GFEQQWLSITFSKAIFLGNGLVAIL 181 (360)
Q Consensus 157 ----~~~~~~~~~~~~~~~~~g~~~g~~~ 181 (360)
.+..+.....+.-....|+.+...+
T Consensus 152 ~~~~~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 152 DGMKVRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred CceeeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 2344444444554555555444443
No 240
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.47 E-value=0.0068 Score=57.27 Aligned_cols=59 Identities=14% Similarity=0.021 Sum_probs=41.2
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC 116 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 116 (360)
..|.+.+.++.|.+... ........+...++..+...+.||+|||+.++.+...+.++.
T Consensus 315 ~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~ 373 (513)
T KOG0254|consen 315 FYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICL 373 (513)
T ss_pred EeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHH
Confidence 35588888888877553 222222233344444556899999999999999999888865
No 241
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.35 E-value=0.021 Score=52.96 Aligned_cols=136 Identities=17% Similarity=0.083 Sum_probs=79.3
Q ss_pred HHHhhhhhhhhhhhhhhcc-hHHHHHHHHHHHHHH-HHHhcch---------------------HHHHHHHHHHHHhHhh
Q 018113 83 GSSMLFGTIVGSLADKQGR-KRACVTYCLTYILSC-ITKHSPQ---------------------YKILMIGRILGGIATS 139 (360)
Q Consensus 83 ~~~~~~~~~~G~l~Dr~Gr-r~~l~~~~~~~~~~~-l~~~~~~---------------------~~~l~~~r~l~G~~~~ 139 (360)
+...+.+.+.-++.+|+|+ |++...+.++.+++. ...+.++ .+..++.-.+.|+..+
T Consensus 316 ~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A 395 (477)
T TIGR01301 316 VVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLA 395 (477)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHH
Confidence 3334555667788999995 777788888877776 3332221 2566777888999998
Q ss_pred hhhhhhhhHHhhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHhhh
Q 018113 140 LLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSS 218 (360)
Q Consensus 140 ~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (360)
..+....+ ++++. +++++..+...+..+....+...+..+..+.+... .+-+-...+.+.++..+++.+.....
T Consensus 396 ~~~siPfa-l~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~----~g~~~~~~~~~~gv~~~~aa~~~~~~ 470 (477)
T TIGR01301 396 ITYSIPFA-LASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQL----FGGGNLPAFVVGAVAAFVSGLLALIL 470 (477)
T ss_pred HHHHHhHH-HHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHH----cCCCCeeHHHHHHHHHHHHHHHHHHh
Confidence 88887755 67765 32222233344444444444444444333332222 23334455666666666666666555
Q ss_pred hcccc
Q 018113 219 WTENY 223 (360)
Q Consensus 219 ~~~~~ 223 (360)
+|+.+
T Consensus 471 ~~~~~ 475 (477)
T TIGR01301 471 LPRPR 475 (477)
T ss_pred CCCCC
Confidence 55443
No 242
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.86 E-value=0.24 Score=44.63 Aligned_cols=120 Identities=17% Similarity=0.166 Sum_probs=67.3
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhccc
Q 018113 77 LFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNK 155 (360)
Q Consensus 77 ~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~ 155 (360)
+..+-.+-+.+......+..+|...+.=...+.++..++. +.+++++.+.=+++-.+.+++.|.......+ +.+-.++
T Consensus 64 Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~-lt~~y~~ 142 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLS-LTHFYGK 142 (402)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHH-HHHhcCc
Confidence 3333334444555556677888875544556666677777 6688899888888888888887776665544 4443333
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHH
Q 018113 156 RGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFL 208 (360)
Q Consensus 156 r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 208 (360)
+. -..++ .|.+.++++|+..-..+.+ .++..|..+.....+.
T Consensus 143 ~~------l~~ws----sGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp 184 (402)
T PF02487_consen 143 SS------LSAWS----SGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLP 184 (402)
T ss_pred cc------ccccc----CCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHH
Confidence 21 12222 2333444444433333333 4565555555544433
No 243
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.84 E-value=0.013 Score=39.30 Aligned_cols=45 Identities=18% Similarity=0.186 Sum_probs=36.0
Q ss_pred HHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 267 VFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 267 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
..-|.|.|.++ .+.++ |.+.++..+..+++.++.|.++||.++++
T Consensus 19 ~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~ 66 (77)
T PF12832_consen 19 LYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRK 66 (77)
T ss_pred HHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence 46677778775 45554 56777778889999999999999999986
No 244
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=96.82 E-value=0.0071 Score=56.24 Aligned_cols=62 Identities=8% Similarity=0.020 Sum_probs=43.3
Q ss_pred HHHHHHhhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhc-CCChhhHHHHHHHHHHHH
Q 018113 263 MYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARS-PPRVESYMQIVFVVSSVS 326 (360)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~ 326 (360)
.++....+.|.|+.++.+.+. +.....+.....++.+++|+++||+ |||+ .+..+.....+.
T Consensus 24 s~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr--~iliG~il~~lg 89 (493)
T PRK15462 24 SFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRM--AVMLGALLMAIG 89 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHH--HHHHHHHHHHHH
Confidence 334367889999877767666 3555666777788999999999999 9984 444444444433
No 245
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.65 E-value=0.17 Score=48.12 Aligned_cols=80 Identities=16% Similarity=0.061 Sum_probs=50.2
Q ss_pred hhCCChh---hhHHHHHHHHHHHhhhhhhhhhhhhhhcc-hHHHHHHHHHHHHHH-HHH-h-cchHHHHHHHHHHHHhHh
Q 018113 66 TYGFGKG---EIGQLFIAGFGSSMLFGTIVGSLADKQGR-KRACVTYCLTYILSC-ITK-H-SPQYKILMIGRILGGIAT 138 (360)
Q Consensus 66 ~~g~s~~---~~g~~~~~~~~~~~~~~~~~G~l~Dr~Gr-r~~l~~~~~~~~~~~-l~~-~-~~~~~~l~~~r~l~G~~~ 138 (360)
-|+-|.. +.++......++...++.+.|.+..+.+| |+.++.+.+++.+++ +++ . .+|....+..-++.|++.
T Consensus 340 vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~gi 419 (599)
T PF06609_consen 340 VFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGI 419 (599)
T ss_pred hccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhH
Confidence 3554442 45566555556566677778888888887 555566766665543 332 2 345556667778888888
Q ss_pred hhhhhhh
Q 018113 139 SLLFSAF 145 (360)
Q Consensus 139 ~~~~~~~ 145 (360)
|......
T Consensus 420 G~~~~~~ 426 (599)
T PF06609_consen 420 GGILVPA 426 (599)
T ss_pred HHHHHHH
Confidence 8765443
No 246
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.61 E-value=1.7e-05 Score=73.52 Aligned_cols=156 Identities=13% Similarity=0.024 Sum_probs=78.1
Q ss_pred HHHHHHHHhhCCChh-hhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHH----hcchH-----HH
Q 018113 58 PYVYYLYSTYGFGKG-EIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK----HSPQY-----KI 126 (360)
Q Consensus 58 ~~~~~~~~~~g~s~~-~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~----~~~~~-----~~ 126 (360)
.+.+.+.++.+.++. ...... .+...++.+....+.||+|||+.++.+....+++. ..+ ..++. ..
T Consensus 274 ~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (451)
T PF00083_consen 274 YYSPSIFENAGISNSFLATLIL---GLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSIL 350 (451)
T ss_pred cccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 346677777777776 122221 22233444456789999999999999988877755 332 11111 11
Q ss_pred HHHHHHHHHhHhh-hhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhh
Q 018113 127 LMIGRILGGIATS-LLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFD 202 (360)
Q Consensus 127 l~~~r~l~G~~~~-~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~ 202 (360)
.++.-.+.....+ +..+.. ..+.+|. +.|... .+....++. ++..+.+.+...+.+..+ -...+.
T Consensus 351 ~i~~~~l~~~~~~~g~~~~~-~~~~~ElfPt~~R~~~-------~~~~~~~~~-i~~~i~~~~~~~~~~~~~--~~~~~~ 419 (451)
T PF00083_consen 351 SIVFLALFFAFFSLGWGPLP-WIYTAELFPTKVRSTG-------IGLSYAVGR-IGGFIIPFLFPYLFNNLG--GWGVFL 419 (451)
T ss_pred cceeeeeccccccccccccc-cccccccccccccccc-------ccccccccc-cccccccccccccccccc--ccccch
Confidence 1111111211222 111222 2356776 445542 222233333 444455555444443332 123344
Q ss_pred hhHHHHHHHHHHHhhhhccccCCCC
Q 018113 203 AAACFLAIGMVIILSSWTENYGDPS 227 (360)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (360)
+.+.+..+.........||+++++-
T Consensus 420 i~~~~~~i~~i~~~~~lpET~g~~l 444 (451)
T PF00083_consen 420 IFAGVCLIAIIFVYFFLPETKGKTL 444 (451)
T ss_pred hhHHHHHHHHhheeEEEeeCCCCCH
Confidence 4455555555555577888877543
No 247
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.46 E-value=0.0043 Score=56.86 Aligned_cols=59 Identities=19% Similarity=0.205 Sum_probs=51.8
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS 115 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~ 115 (360)
.|+++.+.+++|+++++.|.+...--+..++..|++|.++||+-+||.++++..+..+.
T Consensus 31 ~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~ 89 (618)
T KOG3762|consen 31 FPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVT 89 (618)
T ss_pred chHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHH
Confidence 58888899999999999999999988889999999999999999888777776666553
No 248
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=96.40 E-value=0.11 Score=45.18 Aligned_cols=240 Identities=15% Similarity=0.099 Sum_probs=117.2
Q ss_pred HH-HHHHH-HhhCCChhhhH-HH---HHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHH
Q 018113 58 PY-VYYLY-STYGFGKGEIG-QL---FIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIG 130 (360)
Q Consensus 58 ~~-~~~~~-~~~g~s~~~~g-~~---~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~ 130 (360)
|+ .|++. .+.+++..|+. -+ -+-.++...+ +.=.+.|-.-.|++++.-.+...... +.-+.++.+.+-+.
T Consensus 25 P~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~Lv---pvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvl 101 (433)
T KOG3810|consen 25 PYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLV---PVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVL 101 (433)
T ss_pred CccchhccCCCCCccHHHHhcccccchhHHHHHHHH---HHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeee
Confidence 55 44444 35567766654 11 1112222222 24457898888998887766655555 66788999999888
Q ss_pred HHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHH
Q 018113 131 RILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACF 207 (360)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 207 (360)
.+..|...+... +-.+ ++-+. +++.+..+...+..-. |...|..++..+.+ ...+.....-.+....
T Consensus 102 E~FyG~~tAaEI-AYys-YIYs~Vd~~~Yqrvt~y~RaA~L~----g~~~g~vlaQlLvs----~~~~sy~~LN~ISL~~ 171 (433)
T KOG3810|consen 102 EFFYGPATAAEI-AYYS-YIYSKVDPEMYKRVTGYCRAAFLV----GKFVGSVLAQLLVS----LETLSYTTLNYISLAE 171 (433)
T ss_pred hhhcChHHHHHH-hhhh-eeeeecCHHHHHHHHHHhHHHHHH----HhHHHhHHHHHHhh----hcccchhhhchhhHHH
Confidence 999888766542 2212 43332 4444444444444332 33333344433332 2223332222222222
Q ss_pred HHHHHHHHhhhhccccC-------CCC-------c--chhH-H-------HHHHHHHHHHhcchhHHHHHHHHHHHHhhH
Q 018113 208 LAIGMVIILSSWTENYG-------DPS-------E--SKDL-L-------TQFRGAAVAIASDEKIALLGAIQSLFEGSM 263 (360)
Q Consensus 208 ~~~~~~~~~~~~~~~~~-------~~~-------~--~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
..+...+. ..+|..++ +++ + .++. . ....+...+..+||++..-.+-..+...+.
T Consensus 172 ~~ia~~~A-~fLP~v~rSl~f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~ 250 (433)
T KOG3810|consen 172 VTIAVLLA-LFLPRVKRSLYFHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGY 250 (433)
T ss_pred HHHHHHHH-hhCCCCchhhhhhcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchh
Confidence 22222222 22221110 000 0 0000 1 111223445567787776666555555555
Q ss_pred HHHHHhhhccccCCCCCcch----hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 264 YTFVFLWTPALSPNDEEIPH----GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
+. ..+|....-++....+. |..=++..+.+.++.+..|.+--+..|..
T Consensus 251 ~Q-V~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g 302 (433)
T KOG3810|consen 251 YQ-VTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWG 302 (433)
T ss_pred HH-HHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhh
Confidence 44 34444433222211111 44445666778888888898876666654
No 249
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.36 E-value=0.051 Score=48.99 Aligned_cols=89 Identities=17% Similarity=0.049 Sum_probs=57.9
Q ss_pred HHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcc-hHHHHHHHHHHHHHH--HHHh---cchHHHHHHHHHHHHh
Q 018113 63 LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR-KRACVTYCLTYILSC--ITKH---SPQYKILMIGRILGGI 136 (360)
Q Consensus 63 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Gr-r~~l~~~~~~~~~~~--l~~~---~~~~~~l~~~r~l~G~ 136 (360)
..+.-|.+....|.......+++++++...|.+.||... |.+.........++. +..+ ..+.+.+...-.+.|.
T Consensus 292 ~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~ 371 (480)
T KOG2563|consen 292 ALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGF 371 (480)
T ss_pred ccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHH
Confidence 344556777788888888889999999999999999865 555555555554442 1111 2233455555667777
Q ss_pred HhhhhhhhhhhHHhhh
Q 018113 137 ATSLLFSAFESWLVAE 152 (360)
Q Consensus 137 ~~~~~~~~~~~~~i~~ 152 (360)
......|...- +-.|
T Consensus 372 ~~~~~~Pig~E-lgvE 386 (480)
T KOG2563|consen 372 FGTGYLPIGFE-LGVE 386 (480)
T ss_pred hhcCCCCccee-eeee
Confidence 76666675533 4344
No 250
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.32 E-value=0.94 Score=42.31 Aligned_cols=79 Identities=11% Similarity=0.175 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhcchhHHHHHHHHHHHHhhHHHHHHhhhcccc---CCCCCcch--hHHHHHHHHHHHHHHHHHHHHHhhc
Q 018113 234 TQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS---PNDEEIPH--GFIFATFMLASMLGSSLASRLMARS 308 (360)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~ 308 (360)
....+..+.++|+|.+..++....+...+....-..|-.... .+....+. |......++..++..++++.+.+|+
T Consensus 267 ~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~ 346 (491)
T PF03219_consen 267 MSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRF 346 (491)
T ss_pred ccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344566778888888888776665555444332233332211 12111111 3344445566666668889999999
Q ss_pred CCCh
Q 018113 309 PPRV 312 (360)
Q Consensus 309 g~~~ 312 (360)
|-+.
T Consensus 347 GW~~ 350 (491)
T PF03219_consen 347 GWRT 350 (491)
T ss_pred hHHH
Confidence 8874
No 251
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.29 E-value=0.34 Score=42.95 Aligned_cols=46 Identities=15% Similarity=0.234 Sum_probs=31.8
Q ss_pred HHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhh-----hhcchHHHH
Q 018113 59 YVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD-----KQGRKRACV 106 (360)
Q Consensus 59 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~D-----r~Grr~~l~ 106 (360)
.+|.+.+.-|.|.++.+....++. -...-+.+.++.| |+||||.-+
T Consensus 52 ~iP~lL~ak~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWv 102 (510)
T KOG3574|consen 52 AIPLLLQAKGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWV 102 (510)
T ss_pred hhHHHhcCCCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhcccccee
Confidence 588888888888888875533322 1223345888999 999998643
No 252
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.07 E-value=0.43 Score=44.24 Aligned_cols=104 Identities=15% Similarity=0.164 Sum_probs=76.4
Q ss_pred HHHhhCCChhhhHHHHHHHHHHHhhhhhhhh-hhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhh
Q 018113 63 LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVG-SLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSL 140 (360)
Q Consensus 63 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G-~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~ 140 (360)
+...+++++.+.+...+.....+.+...+.. .+...+|-|+++..|...-.+.. ..+++++.|+......+.++.. .
T Consensus 268 l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~-~ 346 (463)
T KOG2816|consen 268 LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAG-I 346 (463)
T ss_pred EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhc-c
Confidence 3457899999999777777776777777544 78888999998888888888877 7799999999998888887753 3
Q ss_pred hhhhhhhHHhhh---ccccchhhHHHHHHHH
Q 018113 141 LFSAFESWLVAE---HNKRGFEQQWLSITFS 168 (360)
Q Consensus 141 ~~~~~~~~~i~~---~~~r~~~~~~~~~~~~ 168 (360)
..+...+ .++. .+++|+..++......
T Consensus 347 ~~pa~~s-~~s~~v~~~e~g~v~~~is~i~~ 376 (463)
T KOG2816|consen 347 VFPAIRA-FASILVSPEEQGKVFGIISGIEG 376 (463)
T ss_pred hhHHHHh-HHHhhcccccccchhhHHHHHHH
Confidence 3455544 5443 3788885554444433
No 253
>PTZ00207 hypothetical protein; Provisional
Probab=95.85 E-value=0.13 Score=49.12 Aligned_cols=148 Identities=11% Similarity=0.079 Sum_probs=76.0
Q ss_pred HHHHHHhh-CCChhh-hHH-HHHHHHHHHhhhhhhhhhhh---hhhc-----chHH-HHHHHHHHHHHH-HHHhcchHHH
Q 018113 60 VYYLYSTY-GFGKGE-IGQ-LFIAGFGSSMLFGTIVGSLA---DKQG-----RKRA-CVTYCLTYILSC-ITKHSPQYKI 126 (360)
Q Consensus 60 ~~~~~~~~-g~s~~~-~g~-~~~~~~~~~~~~~~~~G~l~---Dr~G-----rr~~-l~~~~~~~~~~~-l~~~~~~~~~ 126 (360)
+.++.+.+ |.+.++ ... ..+...+...++-+..|.+. .|.. +|+. +.+..+ +.++. +.++.-....
T Consensus 376 ~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~ 454 (591)
T PTZ00207 376 ARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAA 454 (591)
T ss_pred HHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccH
Confidence 66788888 663322 121 33444444444444455444 2222 1222 233333 44444 4444332268
Q ss_pred HHHHHHHHHhHhhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhhcccC----C------
Q 018113 127 LMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILS-GLFGNLLVDSFS----L------ 195 (360)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~-~~l~~~l~~~~~----~------ 195 (360)
+.+.-++.|++.|..++.... .++|.-.+ . ....++... +++.+|..+- ..+.+.+.|... -
T Consensus 455 L~~~~~lvg~~~G~~~~~~~~-i~selFgk-~----~g~~yN~~~-~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~ 527 (591)
T PTZ00207 455 LPLPYFIAAFANGFMAATIAL-VTRTIFAK-D----PAKHYNFCF-LGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTER 527 (591)
T ss_pred hHHHHHHHHHHhhHhHHHHHH-HHHHHhcc-c----hHHHhhHHh-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCc
Confidence 999999999999999888855 78887222 2 122333222 2344555543 445554443221 1
Q ss_pred -CCchhhhhhHHHHHHHHHHH
Q 018113 196 -GPVAPFDAAACFLAIGMVII 215 (360)
Q Consensus 196 -~~~~~~~~~~~~~~~~~~~~ 215 (360)
=.+.+|.+.+.++..+.+..
T Consensus 528 ~C~~~~~~v~~~~~~~g~~~s 548 (591)
T PTZ00207 528 VCVVMPLAFLLGLSFLAFITS 548 (591)
T ss_pred eeeHhHHHHHHHHHHHHHHHH
Confidence 13567777766666555553
No 254
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.77 E-value=0.38 Score=42.73 Aligned_cols=115 Identities=13% Similarity=0.158 Sum_probs=77.9
Q ss_pred HhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhc--chHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhhh
Q 018113 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG--RKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLL 141 (360)
Q Consensus 65 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~G--rr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~ 141 (360)
+.+|.++.|.|.+++...+.+.+.+....+..||.. -|-.+..+.....-.. +.+.++....+..+-.+-.+..+..
T Consensus 290 ~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~ 369 (451)
T KOG2615|consen 290 GRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASV 369 (451)
T ss_pred CccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHh
Confidence 679999999998888877778888777888888876 5555655555544444 5677778788888888888877777
Q ss_pred hhhhhhHHhhhc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 018113 142 FSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL 188 (360)
Q Consensus 142 ~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (360)
.+.... ++... ++||...+..++... ++-.++|.+++.
T Consensus 370 vt~Lt~-Lv~~~~~~~qrG~~~Gi~~Sl~a--------laRaiGPlv~g~ 410 (451)
T KOG2615|consen 370 VTCLTS-LVHKYGPQSQRGTLNGIFRSLGA--------LARAIGPLVSGV 410 (451)
T ss_pred hHHHHH-HHHhcCCcccchHHHHHHHHHHH--------HHHHhhhhhhhe
Confidence 666544 65554 667764444433332 444555555543
No 255
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=95.69 E-value=0.1 Score=47.25 Aligned_cols=43 Identities=7% Similarity=0.116 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHH
Q 018113 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLL 328 (360)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 328 (360)
+.+.....++.++|++..|++.||+|||+ ......++..++.+
T Consensus 87 ~~Vn~~A~vGti~GQl~FG~lgD~~GRK~--vYG~~liImIi~t~ 129 (538)
T KOG0252|consen 87 ALVNAAALVGTIFGQLFFGWLGDKFGRKK--VYGKELIIMIICSA 129 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchh--hhhHHHHHHHHHHH
Confidence 45667778999999999999999999994 44444444444444
No 256
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=95.38 E-value=2.6 Score=39.98 Aligned_cols=62 Identities=18% Similarity=0.095 Sum_probs=37.9
Q ss_pred hhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHH---HHHHHHHHHHhHhhhhhhhhhhHHhhhc
Q 018113 91 IVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYK---ILMIGRILGGIATSLLFSAFESWLVAEH 153 (360)
Q Consensus 91 ~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~---~l~~~r~l~G~~~~~~~~~~~~~~i~~~ 153 (360)
..+...||+|||.....+.....+++ ..++..+.. ...+...+...+.+..+... ..+.+|.
T Consensus 369 ~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~el 434 (521)
T KOG0255|consen 369 RNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLI-FLYSAEL 434 (521)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHH-HHHHHhh
Confidence 45789999999999999999998877 555543322 23333344444444444443 2245554
No 257
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.18 E-value=0.16 Score=45.76 Aligned_cols=106 Identities=14% Similarity=0.235 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHH-HH---HhcchH------HHHHHHHHHHHhHhhhhhhhhhhHHhhhc-cc--cchhhHHHHHHHHH
Q 018113 103 RACVTYCLTYILSC-IT---KHSPQY------KILMIGRILGGIATSLLFSAFESWLVAEH-NK--RGFEQQWLSITFSK 169 (360)
Q Consensus 103 ~~l~~~~~~~~~~~-l~---~~~~~~------~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~--r~~~~~~~~~~~~~ 169 (360)
|++.++.++..+|. +. +.-++. +.+.++-.+.++|.|+.-|...+ +.+|. ++ +.+. ...++.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~-~~~dq~~~~~~~~~----~~~F~~ 76 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISP-FGADQYDEDDDSRR----DSFFNW 76 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHH-HHHHCSSTTTTTHH----HHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHH-HHHHHhcccchhhh----hhhHHH
Confidence 46777778888876 42 222222 57888889999999999888856 87775 22 2232 223332
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccCCCCchhhhhhHHHHHHHHHHHh
Q 018113 170 AIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (360)
Q Consensus 170 ~~~~g~~~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (360)
.+. +..+|..++.....++-+. ++|...|.+..+..+++.....
T Consensus 77 fY~-~in~G~~~~~~~~~~i~~~--~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 77 FYW-GINIGSLFSPTLVPYIQQN--YGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHH-HHHHHHHHHHHCCCHHHHC--S-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHH-HHhhhhHhhcccchhhccc--cchhhhhhHHHHHHHHHHHHHH
Confidence 222 3336667776666666555 4555678777766666655553
No 258
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=94.50 E-value=2.7 Score=40.20 Aligned_cols=153 Identities=16% Similarity=0.117 Sum_probs=87.6
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhh-cchHHHHHHHHHHHHHH-HH---Hhcc---------
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSC-IT---KHSP--------- 122 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~-l~---~~~~--------- 122 (360)
.+.+.++.++++.+...+.-................+.++|-| ||=+++.++.++...+. +. +..+
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~ 137 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKF 137 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccC
Confidence 4668888899998887666666666665666667899999976 89888888887776653 21 1111
Q ss_pred ----------h---HHHHHHHHHHHHhHhhhhhhhhhhHHhhhc-c---ccchhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 018113 123 ----------Q---YKILMIGRILGGIATSLLFSAFESWLVAEH-N---KRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (360)
Q Consensus 123 ----------~---~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~---~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 185 (360)
+ ...+..+.-+..+|.|+.-+...+ +-+|. + ++.. ......++. .......|..++..+
T Consensus 138 ~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~-fGadQfd~~~~~~~--~~~~~fFnW-~yf~~~~g~l~a~t~ 213 (571)
T KOG1237|consen 138 KPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLA-FGADQFDELDPVEV--KGIPSFFNW-FYFSQNGGALLAQTV 213 (571)
T ss_pred CCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchh-hcccccCccCcchh--hCcccchhH-HHHHHHHHHHHHHHH
Confidence 0 125555666677788887777644 54443 2 1111 001112221 112333555555555
Q ss_pred hhhhhcccCCCCchhhhhhHHHHHHHHHHH
Q 018113 186 GNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (360)
Q Consensus 186 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (360)
..+.-+..+|. .-|.+..+...++.++.
T Consensus 214 ~vyiq~~~~w~--lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 214 LVYIQDNVGWK--LGFGIPTVLNALAILIF 241 (571)
T ss_pred HHhhhhcccce--eeccHHHHHHHHHHHHH
Confidence 44443444554 45666655555444444
No 259
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=94.12 E-value=0.8 Score=44.54 Aligned_cols=59 Identities=20% Similarity=0.049 Sum_probs=42.5
Q ss_pred HHHHHHHH-hhCCChhhhHHHHHHHHH-HHhhhhhhhhhhhhhhc--chHHHHHHHHHHHHHH
Q 018113 58 PYVYYLYS-TYGFGKGEIGQLFIAGFG-SSMLFGTIVGSLADKQG--RKRACVTYCLTYILSC 116 (360)
Q Consensus 58 ~~~~~~~~-~~g~s~~~~g~~~~~~~~-~~~~~~~~~G~l~Dr~G--rr~~l~~~~~~~~~~~ 116 (360)
.++|...+ ++|.++.+.+.+.....+ +..++.++.|+++||++ .|+.+..+.+...++.
T Consensus 351 ~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~ 413 (633)
T TIGR00805 351 TFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSY 413 (633)
T ss_pred HHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHH
Confidence 44565554 699999999988877665 45677778999999998 4566666655555543
No 260
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=93.99 E-value=1.2 Score=39.35 Aligned_cols=29 Identities=14% Similarity=0.185 Sum_probs=23.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 284 GFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
+..+......+.+...+.|.++||+|||+
T Consensus 72 a~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~ 100 (354)
T PF05631_consen 72 AILFVAGFASSAIFGTFVGSLADRYGRKK 100 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchH
Confidence 45555556667788888999999999996
No 261
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=92.47 E-value=9 Score=35.56 Aligned_cols=106 Identities=17% Similarity=0.055 Sum_probs=58.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhcch-------HHHHHHHHHHHHHH-HHH-----hc-----chHHHHHHHHHHHHhH
Q 018113 76 QLFIAGFGSSMLFGTIVGSLADKQGRK-------RACVTYCLTYILSC-ITK-----HS-----PQYKILMIGRILGGIA 137 (360)
Q Consensus 76 ~~~~~~~~~~~~~~~~~G~l~Dr~Grr-------~~l~~~~~~~~~~~-l~~-----~~-----~~~~~l~~~r~l~G~~ 137 (360)
+..+...+.-.+.+|+..++-.|.++| .-+-++..+.+.+. +.. .. -|.++++..-+++++|
T Consensus 328 ~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~g 407 (498)
T COG3104 328 WFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFG 407 (498)
T ss_pred HHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHH
Confidence 334444444456666666655554333 12444555555544 211 11 3577888899999999
Q ss_pred hhhhhhhhhhHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018113 138 TSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (360)
Q Consensus 138 ~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (360)
+=+..|...+ +++...++ . ..+.......++.+.+..+++.+++
T Consensus 408 EL~iSpvGLs-~~t~laP~-~----~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 408 ELFISPVGLS-MVTKLAPP-A----LKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHhCHHHHH-HHHHhChH-H----HHHHHHHHHHHHHHHHHHhhceecc
Confidence 9999998877 66654322 2 2223333444455555555555444
No 262
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=92.23 E-value=7.7 Score=35.72 Aligned_cols=115 Identities=21% Similarity=0.115 Sum_probs=70.7
Q ss_pred hHHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-H---HHhcch-------HH
Q 018113 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-I---TKHSPQ-------YK 125 (360)
Q Consensus 57 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l---~~~~~~-------~~ 125 (360)
+....++..+ |+++..+|..=+.+.+.+..+.....++.+|+|..|.=.++...-.... + ..+.+. ..
T Consensus 279 ~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~ 357 (432)
T PF06963_consen 279 GLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAY 357 (432)
T ss_pred HHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHH
Confidence 3334444444 9999999999999988888888899999999999888777765444332 1 122222 22
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHHHHHHH
Q 018113 126 ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFL 173 (360)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~ 173 (360)
.++.+-.+.-+|.=...-+... ++.|. ++||...+...+..+..-.+
T Consensus 358 ~l~~gi~~SR~GLW~fDL~~~q-i~Qe~V~~~~Rg~v~gvq~sl~~lf~ll 407 (432)
T PF06963_consen 358 LLLGGIALSRIGLWSFDLAVTQ-IMQENVPESERGAVSGVQNSLQSLFELL 407 (432)
T ss_pred HHHHHHHHHHHHHHhhhHHHHH-hhcccCCHHHhhHHHHHHHHHHHHHHHH
Confidence 3333333333333333333323 55554 77888777777666644443
No 263
>PRK03612 spermidine synthase; Provisional
Probab=91.78 E-value=12 Score=35.52 Aligned_cols=39 Identities=5% Similarity=-0.206 Sum_probs=28.2
Q ss_pred HHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhh
Q 018113 60 VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK 98 (360)
Q Consensus 60 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr 98 (360)
.-.+..-+|-+..+.+.+.+....+..+++...|++.++
T Consensus 38 ~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 38 GTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred HHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 334445678888888888888888888887777776643
No 264
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=91.12 E-value=13 Score=34.56 Aligned_cols=80 Identities=14% Similarity=0.066 Sum_probs=47.9
Q ss_pred cchhHHHHHHHHHHHHHhhhhhHHHHHHHHhhCCC---hhhhHHHHHHHHH-HHhhhhhhhhhhhhhhcchHHHHHHHHH
Q 018113 36 NSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFG---KGEIGQLFIAGFG-SSMLFGTIVGSLADKQGRKRACVTYCLT 111 (360)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s---~~~~g~~~~~~~~-~~~~~~~~~G~l~Dr~Grr~~l~~~~~~ 111 (360)
+|+.+.-+....+..++-.+...++-.+.+.+.++ +..+..+-+...+ ++.+..++.+++.++..|++++-..+..
T Consensus 22 ~r~E~~kflpl~Ll~f~I~~ny~~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~ 101 (509)
T COG3202 22 RRYELKKFLPLALLFFCILFNYNLLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGF 101 (509)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 34444444444444455555545555666666554 3444555555544 4556666789999999999988776655
Q ss_pred HHHH
Q 018113 112 YILS 115 (360)
Q Consensus 112 ~~~~ 115 (360)
+...
T Consensus 102 F~~f 105 (509)
T COG3202 102 FLGF 105 (509)
T ss_pred HHHH
Confidence 5443
No 265
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=90.58 E-value=1.5 Score=40.43 Aligned_cols=48 Identities=23% Similarity=0.182 Sum_probs=35.9
Q ss_pred CChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 018113 69 FGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC 116 (360)
Q Consensus 69 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 116 (360)
.|+...|.+...+.++..++........-+..-|+++..+.++.++..
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~ 299 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLAS 299 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 888888888777777667766667776667778888888877776643
No 266
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=89.15 E-value=17 Score=32.97 Aligned_cols=18 Identities=33% Similarity=0.401 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 018113 290 FMLASMLGSSLASRLMAR 307 (360)
Q Consensus 290 ~~~~~~~~~~~~g~l~dr 307 (360)
+++...+|.....+.-++
T Consensus 292 fN~~d~vG~~~a~~~~~~ 309 (406)
T KOG1479|consen 292 FNVFDLIGSILAALLTWP 309 (406)
T ss_pred hHHHHHhhhhhhhcccCC
Confidence 678888887777666555
No 267
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=88.36 E-value=1.9 Score=36.25 Aligned_cols=21 Identities=10% Similarity=-0.037 Sum_probs=15.3
Q ss_pred HHHHHHhcchhHHHHHHHHHH
Q 018113 238 GAAVAIASDEKIALLGAIQSL 258 (360)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~ 258 (360)
+...+.+|++..|........
T Consensus 85 ~s~~~~LK~K~tw~w~~~Yg~ 105 (267)
T PF07672_consen 85 PSYKSILKEKETWKWILIYGI 105 (267)
T ss_pred chHHHHHccchHHHHHHHHHH
Confidence 466788999988877665554
No 268
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=88.25 E-value=2.5 Score=28.81 Aligned_cols=61 Identities=21% Similarity=0.344 Sum_probs=39.3
Q ss_pred hhhccccCCCCCcch---hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHhHh
Q 018113 269 LWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIV 332 (360)
Q Consensus 269 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 332 (360)
...|...++ .+.+. +.+.+.+.++..+|++...++.++.+++ +.+..+.....+......+
T Consensus 13 plLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~--~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 13 PLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR--RLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred hHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH--HHHHHHHHHHHHHHHHHHH
Confidence 345555544 34433 6888999999999999999998885444 4455555555554444433
No 269
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=87.60 E-value=3.5 Score=38.30 Aligned_cols=57 Identities=7% Similarity=-0.091 Sum_probs=39.1
Q ss_pred ccCCCCCcch----hHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHhHh
Q 018113 274 LSPNDEEIPH----GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIV 332 (360)
Q Consensus 274 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 332 (360)
++.++.+.+. +.+......+..+..+++|+++||+|.|+ .+....+...+...+..+
T Consensus 51 ~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~--vL~l~~l~Wsl~t~L~~f 111 (511)
T TIGR00806 51 YLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKP--VLVLQALSFVCVWLLLLL 111 (511)
T ss_pred HHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchH--HHHHHHHHHHHHHHHHHH
Confidence 3333555544 56778888999999999999999999994 455555444444444443
No 270
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=86.38 E-value=2.8 Score=38.92 Aligned_cols=33 Identities=9% Similarity=0.132 Sum_probs=17.0
Q ss_pred HHHHHHhhhhhhhhcccCCCCchhhhhhHHHHH
Q 018113 177 LVAILSGLFGNLLVDSFSLGPVAPFDAAACFLA 209 (360)
Q Consensus 177 ~g~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 209 (360)
.+..++|.+........|.+|.+.+.....+..
T Consensus 435 ~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~ 467 (488)
T KOG2325|consen 435 IARVVGPIFSTAIFTLSGPRPVWIILLCLLLVV 467 (488)
T ss_pred hhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHH
Confidence 555566666555555556665544444333333
No 271
>PRK11469 hypothetical protein; Provisional
Probab=86.02 E-value=14 Score=29.58 Aligned_cols=25 Identities=8% Similarity=-0.035 Sum_probs=18.4
Q ss_pred hhhhhhhhcchHHHHHHHHHHHHHH
Q 018113 92 VGSLADKQGRKRACVTYCLTYILSC 116 (360)
Q Consensus 92 ~G~l~Dr~Grr~~l~~~~~~~~~~~ 116 (360)
+.++.+++|+|.-++-+.++..++.
T Consensus 155 G~~~g~~~g~~a~~lgG~iLI~iGi 179 (188)
T PRK11469 155 GRFIGSIIGKKAEILGGLVLIGIGV 179 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4446677888888877777777776
No 272
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=83.70 E-value=7.4 Score=35.78 Aligned_cols=40 Identities=23% Similarity=0.233 Sum_probs=26.0
Q ss_pred HHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhh
Q 018113 60 VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ 99 (360)
Q Consensus 60 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~ 99 (360)
.+...+-.|.+..+.-....+...++.++..++|.++||+
T Consensus 271 ~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~ 310 (493)
T KOG1330|consen 271 IYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKL 310 (493)
T ss_pred HHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHH
Confidence 5555555565544444455555666677777899999984
No 273
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.13 E-value=3 Score=29.45 Aligned_cols=31 Identities=29% Similarity=0.308 Sum_probs=21.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhh-cchHHHHH
Q 018113 77 LFIAGFGSSMLFGTIVGSLADKQ-GRKRACVT 107 (360)
Q Consensus 77 ~~~~~~~~~~~~~~~~G~l~Dr~-Grr~~l~~ 107 (360)
-.+.-++++.+.+...|++.||| |.++.-++
T Consensus 47 klssefIsGilVGa~iG~llD~~agTsPwglI 78 (116)
T COG5336 47 KLSSEFISGILVGAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 34555677778888899999997 44444333
No 274
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=77.11 E-value=9.9 Score=32.08 Aligned_cols=72 Identities=22% Similarity=0.244 Sum_probs=43.5
Q ss_pred hhHHHHHHhhhccccCCCCCcchh---HHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHhHhccCCc
Q 018113 261 GSMYTFVFLWTPALSPNDEEIPHG---FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTIPGS 337 (360)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (360)
+..|. ...|.|.+. +..+.++. .+.....++.-+ .++.|.+.||.|.+ ..+.++................+.
T Consensus 16 Gt~Y~-Fs~yS~~Lk-~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~--~~l~iG~~~~~~GY~~~~l~~~~~ 90 (250)
T PF06813_consen 16 GTTYT-FSAYSPQLK-SRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPW--VVLLIGAVLGFVGYGLLWLAVSGR 90 (250)
T ss_pred Ccccc-hhhhhHHHH-HHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchH--HHHHHHHHHHHHHHHHHHHHHhCc
Confidence 34444 355666554 45677774 344444666655 47889999999988 455566666555555554444443
No 275
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=75.18 E-value=46 Score=27.53 Aligned_cols=52 Identities=13% Similarity=0.078 Sum_probs=37.2
Q ss_pred HHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 018113 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC 116 (360)
Q Consensus 62 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 116 (360)
...+..+.+..++|......+.... ...-.+.+|.+.|+....+..+..+|.
T Consensus 121 l~a~~~~~s~~~ig~~~g~if~i~i---l~ss~i~r~~~~~~p~~LG~~Mi~~Gl 172 (224)
T PF09930_consen 121 LLAPSIGLSGWEIGLVLGLIFFILI---LLSSFIFRRLKKPYPIILGNFMIFLGL 172 (224)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHH---HHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 3456788999999987766666454 336667778887777788877776664
No 276
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=74.92 E-value=10 Score=30.46 Aligned_cols=98 Identities=16% Similarity=0.174 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHHHHHHHhh--hccccccCCCcccc-cchhHHHHHHHHHHHHHhhhh--hHHHHHHHHhhCCChhhhHHH
Q 018113 3 MFFYLVFGALGAVVAALEL--SKTNKDRINTSSAF-NSFKNNYLLVYSLMMAGDWLQ--GPYVYYLYSTYGFGKGEIGQL 77 (360)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~s~~~~g~~ 77 (360)
+-|.+++++++.+.+.... +++++++++.+++. ++.....+.........++-| +.|.|.+.+. +..+....
T Consensus 55 ~~wiLGlLGliPI~lGi~~l~~~~~~~e~~~~~~~~~~~~~~~i~~Va~iTiAnGgDNigIYiP~Fa~~---s~~~l~v~ 131 (191)
T PF03596_consen 55 PEWILGLLGLIPIYLGIKALFSGEDDDEEEAEEKLNSPKSNSLILTVAAITIANGGDNIGIYIPLFASL---SLAELIVI 131 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCccccccccccccccccchhHHhhhhhhhcCCCeEEEeehhhhcC---CHHHHHHH
Confidence 3567788888888887752 22222221111111 111122223333344445656 3556665432 33333322
Q ss_pred HHH--------HHHHHhhhhh-hhhhhhhhhcchH
Q 018113 78 FIA--------GFGSSMLFGT-IVGSLADKQGRKR 103 (360)
Q Consensus 78 ~~~--------~~~~~~~~~~-~~G~l~Dr~Grr~ 103 (360)
... .+++..+... ..+...||+||+-
T Consensus 132 l~vF~ilv~v~c~la~~l~~~p~i~~~leryg~~l 166 (191)
T PF03596_consen 132 LIVFLILVGVWCFLAYKLARIPIIAEFLERYGRWL 166 (191)
T ss_pred HHHHHHHHHHHHHHHHHHhCChHHHHHHHHhcccH
Confidence 211 1222223333 4566788888864
No 277
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=74.85 E-value=50 Score=27.81 Aligned_cols=46 Identities=11% Similarity=0.025 Sum_probs=26.8
Q ss_pred CChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 018113 69 FGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC 116 (360)
Q Consensus 69 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 116 (360)
.+.++...+....-+...+.+.+. +-||.++|+.+-....+.++..
T Consensus 94 ~~~~~a~~l~~~~Pi~~~lla~~~--l~Ek~~~~~~l~~~~~~~Gv~l 139 (256)
T TIGR00688 94 GSSLEVSLGYLINPLVMVALGRVF--LKERISRFQFIAVIIATLGVIS 139 (256)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH--HhcCCCHHHHHHHHHHHHHHHH
Confidence 455555554444433333433322 5699999998877766666544
No 278
>COG2119 Predicted membrane protein [Function unknown]
Probab=73.81 E-value=43 Score=26.57 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=21.5
Q ss_pred HhhhhhhhhhhhhhhcchHHHHHHHHHHHH
Q 018113 85 SMLFGTIVGSLADKQGRKRACVTYCLTYIL 114 (360)
Q Consensus 85 ~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~ 114 (360)
..+.-..+.++++|+..|++-..+.+++.+
T Consensus 147 s~laVl~G~~ia~ki~~r~l~~~aallFl~ 176 (190)
T COG2119 147 SVLAVLLGKLIAGKLPERLLRFIAALLFLI 176 (190)
T ss_pred HHHHHHHHHHHHccCCHHHHHHHHHHHHHH
Confidence 344444567799999999988887766654
No 279
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=69.79 E-value=17 Score=32.82 Aligned_cols=82 Identities=18% Similarity=0.156 Sum_probs=41.6
Q ss_pred hcchhHHHHHHHHHHHHhhHHHHHHhhhccccCC-CCCcch-h---HHHHHHHHHHHHHHHHHHHHHh-----hcCCChh
Q 018113 244 ASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEIPH-G---FIFATFMLASMLGSSLASRLMA-----RSPPRVE 313 (360)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~---~~~~~~~~~~~~~~~~~g~l~d-----r~g~~~~ 313 (360)
.++++-....+...+.++.-++. ..-.|.+++. +.+.+. + ..+..+. --++...++| |+|||+.
T Consensus 27 ~~d~~~illLl~LYllQGiP~GL-~~~iP~lL~ak~vSyt~~a~fS~ay~P~s-----LKllWaPiVDs~y~k~~Grrks 100 (510)
T KOG3574|consen 27 KGDRSSILLLLFLYLLQGIPLGL-IGAIPLLLQAKGVSYTSQAIFSFAYWPFS-----LKLLWAPIVDSVYSKRFGRRKS 100 (510)
T ss_pred hhhhhhHHHHHHHHHHcCCchhH-hhhhHHHhcCCCcchhhhhhhhhhhhHHH-----HHHHHHhhhHHHHHHhhccccc
Confidence 44444455555556666666663 3367777763 222222 1 1112222 2345555666 9999985
Q ss_pred hHHHHHHHHHHHHHHHhH
Q 018113 314 SYMQIVFVVSSVSLLLPI 331 (360)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~ 331 (360)
.+.-.-..++..+..+..
T Consensus 101 Wvvp~q~llG~~mllLs~ 118 (510)
T KOG3574|consen 101 WVVPCQYLLGLFMLLLSY 118 (510)
T ss_pred eeeehHHHHHHHHHHHhh
Confidence 544444444444444433
No 280
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=67.98 E-value=1.1e+02 Score=28.68 Aligned_cols=76 Identities=16% Similarity=0.186 Sum_probs=49.2
Q ss_pred Hhhhhhhhhhhh---hhhcchHHHHHHHHHHHHHH-HHHh-----c-------------chHHHHHHHHHHHHhHhhhhh
Q 018113 85 SMLFGTIVGSLA---DKQGRKRACVTYCLTYILSC-ITKH-----S-------------PQYKILMIGRILGGIATSLLF 142 (360)
Q Consensus 85 ~~~~~~~~G~l~---Dr~Grr~~l~~~~~~~~~~~-l~~~-----~-------------~~~~~l~~~r~l~G~~~~~~~ 142 (360)
..+++.+.+.+. +|+||++.+..+..+..++. +.-. + +++...++.-++.|++.+...
T Consensus 292 ~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~ 371 (461)
T KOG3098|consen 292 EVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFN 371 (461)
T ss_pred HHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHH
Confidence 344455555555 56899999988888777655 3211 1 245577788899999999887
Q ss_pred hhhhhHHhhhc--cccchhhH
Q 018113 143 SAFESWLVAEH--NKRGFEQQ 161 (360)
Q Consensus 143 ~~~~~~~i~~~--~~r~~~~~ 161 (360)
... .+++.+. ++|....+
T Consensus 372 t~~-~~ii~~~~~~~~~~~fs 391 (461)
T KOG3098|consen 372 TQR-YVIIALLYPDDRAQAFS 391 (461)
T ss_pred HHH-HHHHHHHhcCchHHHHH
Confidence 766 4466664 44544333
No 281
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=66.30 E-value=80 Score=31.33 Aligned_cols=55 Identities=11% Similarity=0.029 Sum_probs=36.5
Q ss_pred HHHHHHHH-hhCCChhhhHHHHHHHHHHHhhhhh-hhhhhhhhhc--chHHHHHHHHHH
Q 018113 58 PYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGT-IVGSLADKQG--RKRACVTYCLTY 112 (360)
Q Consensus 58 ~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~-~~G~l~Dr~G--rr~~l~~~~~~~ 112 (360)
.|+|-+.| +||.+.+.+..+.....+.+...+. ++|.+..|+- .|....+..+..
T Consensus 413 tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~ 471 (735)
T KOG3626|consen 413 TFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCS 471 (735)
T ss_pred HhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHH
Confidence 55666555 8999999999887665555554444 7899999874 455444444433
No 282
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=64.32 E-value=36 Score=29.87 Aligned_cols=71 Identities=15% Similarity=0.148 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhhhhhhh
Q 018113 75 GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAF 145 (360)
Q Consensus 75 g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 145 (360)
|.+..+-.+-..+.........||+---.-..+..++.+.+. +.+++++.++-+.+-.+..++.|.-....
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTF 136 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITF 136 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeeh
Confidence 333333333344444445666787643222344445555566 77899999988888888887776654443
No 283
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=61.32 E-value=86 Score=25.31 Aligned_cols=28 Identities=25% Similarity=0.398 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 018113 163 LSITFSKAIFLGNGLVAILSGLFGNLLV 190 (360)
Q Consensus 163 ~~~~~~~~~~~g~~~g~~~~~~l~~~l~ 190 (360)
....++.+-.+.+.+-..+.+.++..+.
T Consensus 34 ~~l~y~~GRi~sY~llG~l~g~~G~~l~ 61 (199)
T PF13386_consen 34 RHLLYNLGRILSYTLLGALAGLLGSGLS 61 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556676777777666666666666554
No 284
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=60.28 E-value=1.5e+02 Score=27.61 Aligned_cols=30 Identities=13% Similarity=0.111 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc
Q 018113 123 QYKILMIGRILGGIATSLLFSAFESWLVAEH 153 (360)
Q Consensus 123 ~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~ 153 (360)
.+...++.-++.|++.+..+..... +.+..
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~g-la~~f 134 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFG-LAGVF 134 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchh-hcccC
Confidence 4556666777788888777766644 55543
No 285
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=55.45 E-value=1.7e+02 Score=26.84 Aligned_cols=49 Identities=16% Similarity=0.185 Sum_probs=33.9
Q ss_pred HhcchHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHH
Q 018113 119 KHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFS 168 (360)
Q Consensus 119 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~ 168 (360)
-+.++.+..++.-+..|+..|..+..... .+.|. ++|.+..+.....-+
T Consensus 330 ~fipsi~ivf~lif~eGLlGGa~YVNtF~-~I~~~~~~~~REFslg~vsvsds 381 (402)
T PF02487_consen 330 RFIPSIWIVFVLIFYEGLLGGASYVNTFY-RISEEVPPEDREFSLGAVSVSDS 381 (402)
T ss_pred HHhhHHHHHHHHHHHHHHhhhHHHHHHHH-HHHhcCCHHHHHHHHHHHHHHhh
Confidence 45688888888999999998988888766 45543 556664444443333
No 286
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=48.77 E-value=2.3e+02 Score=26.37 Aligned_cols=46 Identities=20% Similarity=0.186 Sum_probs=26.2
Q ss_pred chHHHHHHHHHHHHhHhhhhhhhhhhHHhhhc---cccchhhHHHHHHHH
Q 018113 122 PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFS 168 (360)
Q Consensus 122 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~ 168 (360)
++-+..++..++.|+..|-..+.+.. +..+. ++|............
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~-~~p~~v~~~e~e~aG~~~~~~l~ 418 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMC-LAPRQVDPHEREVAGALMVIFLL 418 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHH
Confidence 45556677789999998877555533 43333 445443333333333
No 287
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=48.59 E-value=98 Score=22.13 Aligned_cols=25 Identities=8% Similarity=0.080 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-CCCh
Q 018113 288 ATFMLASMLGSSLASRLMARS-PPRV 312 (360)
Q Consensus 288 ~~~~~~~~~~~~~~g~l~dr~-g~~~ 312 (360)
+.-.+++++.....||+.||+ |.++
T Consensus 49 ssefIsGilVGa~iG~llD~~agTsP 74 (116)
T COG5336 49 SSEFISGILVGAGIGWLLDKFAGTSP 74 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 333555666666778999998 4554
No 288
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=48.52 E-value=32 Score=29.26 Aligned_cols=48 Identities=17% Similarity=0.339 Sum_probs=36.4
Q ss_pred HHHHHHHHhhCCChhhhHHHHHHHHHHHhhhhhhhhh---------hhhhhcchHHH
Q 018113 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGS---------LADKQGRKRAC 105 (360)
Q Consensus 58 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~---------l~Dr~Grr~~l 105 (360)
.++-...++.|.++.....++..+.+...+..++.|. -.||+|||+..
T Consensus 38 TYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 38 TYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred HHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 4455567888999988888888888877777777764 35799998754
No 289
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=45.25 E-value=1.1e+02 Score=21.86 Aligned_cols=28 Identities=29% Similarity=0.332 Sum_probs=22.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 018113 284 GFIFATFMLASMLGSSLASRLMARSPPR 311 (360)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 311 (360)
+.......++..++..+.+.+.|+.+.+
T Consensus 90 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 117 (141)
T TIGR00880 90 GLMSAGIALGPLLGPPLGGVLAQFLGWR 117 (141)
T ss_pred HHHHHhHHHHHHHhHHhHHHHhcccchH
Confidence 4556666788888999999999887765
No 290
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=44.90 E-value=2.5e+02 Score=25.82 Aligned_cols=94 Identities=13% Similarity=0.015 Sum_probs=59.6
Q ss_pred HHHHHHHHhh---CCChhhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHH--HHH-HHHhcchHHHHHHHH
Q 018113 58 PYVYYLYSTY---GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYI--LSC-ITKHSPQYKILMIGR 131 (360)
Q Consensus 58 ~~~~~~~~~~---g~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~--~~~-l~~~~~~~~~l~~~r 131 (360)
.+...+.++. +-+..--|.+-.+..+.+.+.+...|.+-.++.+..-+..+..... ... +++..+|.+...++-
T Consensus 268 nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~y 347 (412)
T PF01770_consen 268 NYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGY 347 (412)
T ss_pred HHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4444555555 2222233677777777788888889998777776555554443332 233 668889999988888
Q ss_pred HHHHhHhhhhhhhhhhHHhhh
Q 018113 132 ILGGIATSLLFSAFESWLVAE 152 (360)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~ 152 (360)
++.+.......+.+.. -++.
T Consensus 348 Iif~~~y~fliTiA~~-qIA~ 367 (412)
T PF01770_consen 348 IIFRSLYMFLITIASF-QIAK 367 (412)
T ss_pred HHHHHHHHHHHHHHHH-HHHH
Confidence 8888766666555533 3443
No 291
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=42.72 E-value=2.2e+02 Score=24.38 Aligned_cols=68 Identities=18% Similarity=0.218 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhhhhh-hhhhhhhh-hcchHHHH----HHHHHHHHHHHHH--hcc----hHHHHHHHHHHHHhHhhhhhh
Q 018113 76 QLFIAGFGSSMLFGT-IVGSLADK-QGRKRACV----TYCLTYILSCITK--HSP----QYKILMIGRILGGIATSLLFS 143 (360)
Q Consensus 76 ~~~~~~~~~~~~~~~-~~G~l~Dr-~Grr~~l~----~~~~~~~~~~l~~--~~~----~~~~l~~~r~l~G~~~~~~~~ 143 (360)
.+..+.++.+...++ ..|..... +.||+-+. .+.++..++.++. ..+ +...+.+.-++.|...=+.++
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 345556666666665 67776653 44555433 2233333344332 121 345667777777765433333
No 292
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=39.98 E-value=37 Score=31.46 Aligned_cols=63 Identities=16% Similarity=0.143 Sum_probs=44.6
Q ss_pred HHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHhHhhhh
Q 018113 79 IAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLL 141 (360)
Q Consensus 79 ~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~ 141 (360)
..+.+...+.+....++.||+|-|+.+..+...+.++. +.+..++.......+-..|+-.+..
T Consensus 339 ~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~ 402 (498)
T KOG0637|consen 339 MLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPL 402 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecch
Confidence 34445556777778999999997777777766566665 6677777777788888888544443
No 293
>COG4769 Predicted membrane protein [Function unknown]
Probab=39.78 E-value=1.8e+02 Score=22.69 Aligned_cols=47 Identities=13% Similarity=0.099 Sum_probs=32.7
Q ss_pred HhhhhhhhhhhhhhhcchHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHh
Q 018113 85 SMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGI 136 (360)
Q Consensus 85 ~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~ 136 (360)
+.+.+...-++..++|+|..-.+ +++...++.+|..++.+.+++.+-
T Consensus 86 G~i~S~L~m~~l~~f~~k~~S~l-----giS~mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 86 GAILSTLFMYFLYQFGPKYLSLL-----GISVMGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHcCCceEeee-----ehhhHHHHHHhHHHHHHHHHHHhc
Confidence 44444456678889998876333 233455788999999999988874
No 294
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=39.19 E-value=2.5e+02 Score=24.10 Aligned_cols=25 Identities=16% Similarity=0.153 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHhhhccccccC
Q 018113 5 FYLVFGALGAVVAALELSKTNKDRI 29 (360)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (360)
+.+++++++++++...+...++++.
T Consensus 103 ~~~G~~Al~liiiGv~lts~~~~~~ 127 (269)
T PF06800_consen 103 KIIGFLALVLIIIGVILTSYQDKKS 127 (269)
T ss_pred HHHHHHHHHHHHHHHHHhccccccc
Confidence 5567777777777777655444433
No 295
>PF11045 YbjM: Putative inner membrane protein of Enterobacteriaceae; InterPro: IPR020368 This entry contains membrane proteins with no known function.; GO: 0016021 integral to membrane
Probab=38.51 E-value=1.6e+02 Score=21.73 Aligned_cols=15 Identities=27% Similarity=0.756 Sum_probs=11.8
Q ss_pred hhHhhhccccchhhh
Q 018113 344 WRHLIFRLSPASWLL 358 (360)
Q Consensus 344 ~~~~~f~~~~~~w~~ 358 (360)
|.-+.+.+|+..|+.
T Consensus 90 wQelAw~~SAvFWc~ 104 (125)
T PF11045_consen 90 WQELAWLFSAVFWCA 104 (125)
T ss_pred HHHHHHHHHHHHHHH
Confidence 667778888888874
No 296
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=35.25 E-value=1.7e+02 Score=21.00 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=22.5
Q ss_pred HHHhcchhHHHHHHHHHHHHhhHHHHHHhhhccccCC
Q 018113 241 VAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN 277 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (360)
++..++..+..-.......+...|+....+...+..+
T Consensus 42 rr~l~~~~Fi~Rt~~FIlicAFGYGll~v~~tP~l~~ 78 (106)
T PF11872_consen 42 RRLLSGYHFILRTLAFILICAFGYGLLIVWLTPLLAR 78 (106)
T ss_pred HHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666555555666666666666776666544
No 297
>COG1971 Predicted membrane protein [Function unknown]
Probab=33.42 E-value=2.6e+02 Score=22.53 Aligned_cols=26 Identities=12% Similarity=0.009 Sum_probs=16.0
Q ss_pred hhhhhhhhhcchHHHHHHHHHHHHHH
Q 018113 91 IVGSLADKQGRKRACVTYCLTYILSC 116 (360)
Q Consensus 91 ~~G~l~Dr~Grr~~l~~~~~~~~~~~ 116 (360)
++.++...+|.|.-++.+.++..++.
T Consensus 156 IG~~~g~~~g~~ae~lgGiiLI~~G~ 181 (190)
T COG1971 156 IGRKLGKFLGKYAEILGGIILIGIGV 181 (190)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34445555666777777766666665
No 298
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=32.51 E-value=3.8e+02 Score=24.30 Aligned_cols=93 Identities=11% Similarity=0.034 Sum_probs=54.4
Q ss_pred HHHHHHhhCCChhhh--HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHH-HH--HHHhcchHHHHHHHHHHH
Q 018113 60 VYYLYSTYGFGKGEI--GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SC--ITKHSPQYKILMIGRILG 134 (360)
Q Consensus 60 ~~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~-~~--l~~~~~~~~~l~~~r~l~ 134 (360)
...+.++..-++..+ |..=.+..+.+.+.+...|.+--++.|..-++++..-..- |+ +++.+++.+...++-++.
T Consensus 257 ~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlf 336 (433)
T KOG3810|consen 257 TQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLF 336 (433)
T ss_pred HHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHH
Confidence 334455554222222 4555556666778888899988777776444444332222 33 567788888887777777
Q ss_pred HhHhhhhhhhhhhHHhhhc
Q 018113 135 GIATSLLFSAFESWLVAEH 153 (360)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~ 153 (360)
+.......+.+.. -+++.
T Consensus 337 r~~y~l~itiA~~-~iA~n 354 (433)
T KOG3810|consen 337 RVIYQLTITIATF-QIARN 354 (433)
T ss_pred HhhHhhhhhHHHH-HHHHh
Confidence 6665555555544 44443
No 299
>PRK03612 spermidine synthase; Provisional
Probab=31.95 E-value=3.9e+02 Score=25.54 Aligned_cols=55 Identities=11% Similarity=0.082 Sum_probs=34.8
Q ss_pred hhhhHHHHHHHHhhCC--ChhhhHHHHHHHHHHHhhhhhhhhh-hhhhhcchHHHHHH
Q 018113 54 WLQGPYVYYLYSTYGF--GKGEIGQLFIAGFGSSMLFGTIVGS-LADKQGRKRACVTY 108 (360)
Q Consensus 54 ~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~G~-l~Dr~Grr~~l~~~ 108 (360)
+...|++..+.++..- ....+|.++...++++.+++...|. +...+|-.......
T Consensus 125 G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~ 182 (521)
T PRK03612 125 GMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALT 182 (521)
T ss_pred HHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 3334554444444332 3356788888888888888887776 56688875554443
No 300
>PF07332 DUF1469: Protein of unknown function (DUF1469); InterPro: IPR009937 This entry represents proteins found in hypothetical bacterial proteins where is is annotated as ycf49 or ycf49-like. The function is not known.
Probab=30.80 E-value=2.1e+02 Score=20.73 Aligned_cols=10 Identities=0% Similarity=0.378 Sum_probs=4.1
Q ss_pred hhHHHHHHHH
Q 018113 230 KDLLTQFRGA 239 (360)
Q Consensus 230 ~~~~~~~~~~ 239 (360)
++..++.+++
T Consensus 105 ~~t~~~l~~d 114 (121)
T PF07332_consen 105 EETIAELKED 114 (121)
T ss_pred HHHHHHHHHH
Confidence 3334444433
No 301
>PRK11588 hypothetical protein; Provisional
Probab=29.50 E-value=5e+02 Score=24.71 Aligned_cols=36 Identities=8% Similarity=0.049 Sum_probs=18.4
Q ss_pred hhhhhhhhcchHHHHHH--HHHHHH-HHHHHhcchHHHH
Q 018113 92 VGSLADKQGRKRACVTY--CLTYIL-SCITKHSPQYKIL 127 (360)
Q Consensus 92 ~G~l~Dr~Grr~~l~~~--~~~~~~-~~l~~~~~~~~~l 127 (360)
.+++.+|++.|..+++- +.++++ +...++++....+
T Consensus 136 i~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~Ee~i~f 174 (506)
T PRK11588 136 ILALIRKTRGNEILFIPVLFILFSLGGAVFGMGEEAIAF 174 (506)
T ss_pred HHHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 46778888766544333 333444 2244555544333
No 302
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=28.34 E-value=4.4e+02 Score=23.64 Aligned_cols=57 Identities=9% Similarity=0.070 Sum_probs=40.5
Q ss_pred HhhhhhhhhhhhhhhcchHHHHHHHHHHHH--HH--HHHhcchHHHHHHHHHHHHhHhhhh
Q 018113 85 SMLFGTIVGSLADKQGRKRACVTYCLTYIL--SC--ITKHSPQYKILMIGRILGGIATSLL 141 (360)
Q Consensus 85 ~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~--~~--l~~~~~~~~~l~~~r~l~G~~~~~~ 141 (360)
..+.+++.+++.+++|.-+.+..+.++..= +. ....++|......+..+.|.-.|..
T Consensus 59 a~~l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~T 119 (354)
T PF04346_consen 59 AAFLSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGAT 119 (354)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhccc
Confidence 556677788899999999988887776543 33 3467888877777767776554443
No 303
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=27.93 E-value=1.6e+02 Score=24.49 Aligned_cols=30 Identities=33% Similarity=0.471 Sum_probs=24.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 018113 283 HGFIFATFMLASMLGSSLASRLMARSPPRV 312 (360)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (360)
.+.......+....+.+..|++.||.|||+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 70 (338)
T COG0477 41 YGLLLSAFFLGYAIGSLLAGPLGDRYGRRK 70 (338)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccccchH
Confidence 356667777778888899999999998884
No 304
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=27.91 E-value=4.5e+02 Score=24.17 Aligned_cols=30 Identities=33% Similarity=0.536 Sum_probs=23.9
Q ss_pred HHHhhhhhhhhhhhhhhcchHHHHHHHHHH
Q 018113 83 GSSMLFGTIVGSLADKQGRKRACVTYCLTY 112 (360)
Q Consensus 83 ~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~ 112 (360)
....+.+++.|...|+..|+|++.....+-
T Consensus 74 gs~lvlg~ivGq~vDg~sr~Kvi~~~L~lq 103 (503)
T KOG2601|consen 74 GSQLVLGPIVGQWVDGMSRVKVIQTWLLLQ 103 (503)
T ss_pred hHHHhhHHHHHHHhcchhHHHHHHHHHhhc
Confidence 345577888999999999999988776544
No 305
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=26.27 E-value=1.2e+02 Score=21.67 Aligned_cols=45 Identities=16% Similarity=0.113 Sum_probs=33.2
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 018113 72 GEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC 116 (360)
Q Consensus 72 ~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 116 (360)
+..|-++.++.....+.+..+++..|+.-+.+-=.++..+..++.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~ 98 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGV 98 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhH
Confidence 556777777766677788889999999887776666666665554
No 306
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=25.92 E-value=5e+02 Score=23.52 Aligned_cols=21 Identities=14% Similarity=-0.053 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCC
Q 018113 291 MLASMLGSSLASRLMARSPPR 311 (360)
Q Consensus 291 ~~~~~~~~~~~g~l~dr~g~~ 311 (360)
....++.+...|.+..|.+-+
T Consensus 165 ~~~~I~~Ai~~G~~~y~~~~~ 185 (376)
T PF02554_consen 165 SLLFIPIAILFGLLVYKRGGN 185 (376)
T ss_pred HHHHHHHHHHHhHhheecCCc
Confidence 344556677777775554443
No 307
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=23.87 E-value=3.4e+02 Score=20.87 Aligned_cols=17 Identities=18% Similarity=0.362 Sum_probs=12.5
Q ss_pred HHHHHHHHhhCCChhhh
Q 018113 58 PYVYYLYSTYGFGKGEI 74 (360)
Q Consensus 58 ~~~~~~~~~~g~s~~~~ 74 (360)
+++..+.++.+.++.++
T Consensus 83 ~fi~~vA~~~~V~~~~v 99 (149)
T PF11694_consen 83 HFIESVAKDLGVSKEEV 99 (149)
T ss_pred HHHHHHHHHhCCChheE
Confidence 55667778888887765
No 308
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=23.63 E-value=67 Score=22.49 Aligned_cols=25 Identities=24% Similarity=0.527 Sum_probs=18.1
Q ss_pred CCCchhhhhhHHHHHHHHHHHhhhh
Q 018113 195 LGPVAPFDAAACFLAIGMVIILSSW 219 (360)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (360)
.+|.++|.+.+.+.+.......+.+
T Consensus 50 lQWIFAFvI~avlfv~sl~vav~~~ 74 (97)
T PF08611_consen 50 LQWIFAFVIAAVLFVLSLVVAVPKW 74 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 5788888888888777766665444
No 309
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=23.46 E-value=2.8e+02 Score=19.72 Aligned_cols=39 Identities=8% Similarity=0.026 Sum_probs=20.1
Q ss_pred hhHHHHHHHHHHHhhhhh-hhhhhhhhhcchHHHHHHHHHHHH
Q 018113 73 EIGQLFIAGFGSSMLFGT-IVGSLADKQGRKRACVTYCLTYIL 114 (360)
Q Consensus 73 ~~g~~~~~~~~~~~~~~~-~~G~l~Dr~Grr~~l~~~~~~~~~ 114 (360)
.+..+.....+...+.+. +. -+|..+|+.+-......++
T Consensus 62 ~v~~i~~~~pi~~~ll~~~~~---~er~~~~~~~a~~l~~~Gv 101 (113)
T PF13536_consen 62 LVAAIFSLSPIFTALLSWLFF---KERLSPRRWLAILLILIGV 101 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHh---cCCCCHHHHHHHHHHHHHH
Confidence 444444444443443333 33 3788888876555444443
No 310
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=23.28 E-value=6.7e+02 Score=24.02 Aligned_cols=47 Identities=11% Similarity=0.279 Sum_probs=28.0
Q ss_pred HHHHHHHh--hCCChhhhHHHHHHHHHHHhhhhhhhhhhhh-----hhcchHHHHH
Q 018113 59 YVYYLYST--YGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD-----KQGRKRACVT 107 (360)
Q Consensus 59 ~~~~~~~~--~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~D-----r~Grr~~l~~ 107 (360)
-+|.+.++ -+.|.+|.|....+.+= .-.-+++.++.| |+||||..++
T Consensus 22 siPflL~~~~~~~sy~q~~~fSla~~P--fSlKlLWaPiVDs~y~~~~GRRKSWii 75 (544)
T PF13000_consen 22 SIPFLLQSMAKKVSYSQQAIFSLASYP--FSLKLLWAPIVDSVYSKRIGRRKSWII 75 (544)
T ss_pred cchhhhccccCCCChhHheeeeeeech--hHHHHhhhhhhhhhcccccCCcchhhh
Confidence 37788887 78888888754222110 001123555544 8999997654
No 311
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=22.95 E-value=5.6e+02 Score=23.05 Aligned_cols=45 Identities=4% Similarity=-0.091 Sum_probs=26.3
Q ss_pred CChhhhHHHHHHHHHHHhhhhhhhhh----hhhhhcchHHHHHHHHHHH
Q 018113 69 FGKGEIGQLFIAGFGSSMLFGTIVGS----LADKQGRKRACVTYCLTYI 113 (360)
Q Consensus 69 ~s~~~~g~~~~~~~~~~~~~~~~~G~----l~Dr~Grr~~l~~~~~~~~ 113 (360)
.+.+..+.+....-+...+.+.+.+. +.||.++++.+-....+.+
T Consensus 102 tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~G 150 (358)
T PLN00411 102 SNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIG 150 (358)
T ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHH
Confidence 46666666666655555555554431 4788888886644443333
No 312
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=22.71 E-value=3e+02 Score=21.27 Aligned_cols=30 Identities=20% Similarity=0.013 Sum_probs=20.5
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhhhhcch
Q 018113 73 EIGQLFIAGFGSSMLFGTIVGSLADKQGRK 102 (360)
Q Consensus 73 ~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr 102 (360)
.+..+.+..+++..+.++-.|.++-.+...
T Consensus 97 ~~~~~~S~~~Fg~gllGisYGilSaSWD~~ 126 (153)
T PF11947_consen 97 WAVLLVSLVFFGLGLLGISYGILSASWDPE 126 (153)
T ss_pred hHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 344555666666667777788888887654
No 313
>PF04911 ATP-synt_J: ATP synthase j chain; InterPro: IPR006995 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. F-ATPases (also known as F1F0-ATPase, or H(+)-transporting two-sector ATPase) (3.6.3.14 from EC) are composed of two linked complexes: the F1 ATPase complex is the catalytic core and is composed of 5 subunits (alpha, beta, gamma, delta, epsilon), while the F0 ATPase complex is the membrane-embedded proton channel that is composed of at least 3 subunits (A-C), nine in mitochondria (A-G, F6, F8). Both the F1 and F0 complexes are rotary motors that are coupled back-to-back. In the F1 complex, the central gamma subunit forms the rotor inside the cylinder made of the alpha(3)beta(3) subunits, while in the F0 complex, the ring-shaped C subunits forms the rotor. The two rotors rotate in opposite directions, but the F0 rotor is usually stronger, using the force from the proton gradient to push the F1 rotor in reverse in order to drive ATP synthesis []. These ATPases can also work in reverse to hydrolyse ATP to create a proton gradient. This entry represents subunit J found in the F0 complex of F-ATPases from fungal mitochondria. This subunit does not appear to display sequence similarity with subunits of F-ATPases found in other organisms []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0015078 hydrogen ion transmembrane transporter activity, 0015986 ATP synthesis coupled proton transport, 0045263 proton-transporting ATP synthase complex, coupling factor F(o)
Probab=22.70 E-value=1.3e+02 Score=18.37 Aligned_cols=15 Identities=27% Similarity=-0.040 Sum_probs=6.9
Q ss_pred CchhHHHHHHHHHHH
Q 018113 1 MEMFFYLVFGALGAV 15 (360)
Q Consensus 1 ~~~~~~~~~~~~~~~ 15 (360)
||||+..+.+..-.+
T Consensus 10 ~wPFf~ag~iv~ygv 24 (54)
T PF04911_consen 10 MWPFFAAGAIVYYGV 24 (54)
T ss_pred hhHHHHHHHHHHHHH
Confidence 455555444443333
No 314
>TIGR02123 TRAP_fused TRAP transporter, 4TM/12TM fusion protein. In some species, the 12-transmembrane spanning and 4-transmembrane spanning components of tripartite ATP-independent periplasmic (TRAP)-type transporters are fused. This model describes such transporters, found in the Archaea and in Bacteria.
Probab=22.13 E-value=7.6e+02 Score=24.27 Aligned_cols=19 Identities=5% Similarity=0.279 Sum_probs=11.5
Q ss_pred hhhccccchhhHHHHHHHH
Q 018113 150 VAEHNKRGFEQQWLSITFS 168 (360)
Q Consensus 150 i~~~~~r~~~~~~~~~~~~ 168 (360)
+.+.+|+|.......+...
T Consensus 235 iP~Mkk~GY~~~~Aaav~A 253 (613)
T TIGR02123 235 IPLMKRAGYKPEFAGAVEA 253 (613)
T ss_pred HHHHHHcCCCHHHHHHHHH
Confidence 4455778776665555544
No 315
>COG0306 PitA Phosphate/sulphate permeases [Inorganic ion transport and metabolism]
Probab=21.85 E-value=5.3e+02 Score=22.92 Aligned_cols=51 Identities=8% Similarity=-0.158 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHhhhcccccc-CCCcccccchhHHHHHHHHHHHHHhhhh
Q 018113 6 YLVFGALGAVVAALELSKTNKDR-INTSSAFNSFKNNYLLVYSLMMAGDWLQ 56 (360)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 (360)
.+|+++.....+.....++...+ ...++..+..++..+...+...+..+.+
T Consensus 141 lsPii~~~ia~~l~~~~~~~~~~~~~~~~~~~~~r~l~i~sa~~~aF~hGaN 192 (326)
T COG0306 141 LSPILGGVLAYLLYSLLRRLIVGKDGKRKVERIFRILLIISASLVAFAHGAN 192 (326)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHhcccc
Confidence 34555555444443333322222 1222222334555555555555555544
No 316
>PRK02237 hypothetical protein; Provisional
Probab=21.48 E-value=2.1e+02 Score=20.50 Aligned_cols=45 Identities=11% Similarity=-0.034 Sum_probs=32.7
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHHHHHH
Q 018113 72 GEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC 116 (360)
Q Consensus 72 ~~~g~~~~~~~~~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 116 (360)
++.|-++.++.....+.++.+++..|+.-+-+-=.++..+..++.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~ 100 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGM 100 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhH
Confidence 346777777766677778889999999877666666666665554
No 317
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=21.07 E-value=32 Score=32.88 Aligned_cols=53 Identities=13% Similarity=0.021 Sum_probs=0.0
Q ss_pred hHHHHHHH-HhhCCChhhhHHHHHHHHHHHh-hhhhhhhhhhhhhc--chHHHHHHH
Q 018113 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSM-LFGTIVGSLADKQG--RKRACVTYC 109 (360)
Q Consensus 57 ~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~-~~~~~~G~l~Dr~G--rr~~l~~~~ 109 (360)
..|.|-+. .+|+.++++.+.+.....+.+. ++.+++|.+..|+. .|+.+-...
T Consensus 325 ~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~ 381 (539)
T PF03137_consen 325 ATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCI 381 (539)
T ss_dssp ---------------------------------------------------------
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHH
Confidence 35555544 5899999999888766665444 44448899999884 344444333
Done!