BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018115
(360 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XGJ4|GGM13_GNEGN MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1
Length = 237
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 112/199 (56%), Gaps = 23/199 (11%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K++IKR+E+T+NRQVT+SKRR G+LKKA ELS+LCD ++ L++FS +G+ +
Sbjct: 1 MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSA 60
Query: 61 RSNIEEVIARF-----AQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGA--STQT 113
S+++++I R+ A++T + E + +K +KL NI+ +G ++ T
Sbjct: 61 SSSMKKIIERYQKVSGARITEYDNQHLYCE-MTRMKNENEKL--QTNIRRMMGEDLTSLT 117
Query: 114 VEELTHQVRILQAQLTEVHQRLSYWSNPGNIESIEHLRQMENSLRESINQICLHKENFGK 173
+ EL H L QL R+ N ++ +E+LR+ E L + + +C
Sbjct: 118 MTELHH----LGQQLESASSRVRSRKNQLMLQQLENLRRKERILEDQNSHLC-------- 165
Query: 174 QQLMSLEFAGQSGMHLPLM 192
+L++ + A G+ PL+
Sbjct: 166 -RLLAEQQAAVEGVQEPLL 183
>sp|Q944S9|MAD16_ORYSJ MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica
GN=MADS16 PE=1 SV=2
Length = 224
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 55/73 (75%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K++IKR+E+ +NRQVTYSKRR GI+KKAREL++LCD + ++MFS TG+ F
Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSP 60
Query: 61 RSNIEEVIARFAQ 73
++I+ + R+ Q
Sbjct: 61 STDIKGIFDRYQQ 73
>sp|Q84NC5|MAD25_ORYSJ MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica
GN=MADS25 PE=2 SV=2
Length = 227
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 69/108 (63%), Gaps = 10/108 (9%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K+ IKR+++T NRQVT+SKRR G++KKAREL+ILCD D+ L++FS TGR L+
Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGR--LYDFS 58
Query: 61 RSNIEEVIARFAQ--------LTPQERAKRKLESLEALKKTFKKLDHD 100
S+++ +I R+ + L P AK + L++ + L H+
Sbjct: 59 SSSMKSIIERYQEAGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHN 106
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6
PE=1 SV=2
Length = 252
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 95/182 (52%), Gaps = 18/182 (9%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR ++++KR+E+ NRQVT+SKRRNG+LKKA ELS+LCD ++ L++FS G+ L+
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGK--LYEFG 58
Query: 61 RSNIEEVIARFAQL--------TPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGAS-- 110
IE I R+ + P+E + + + LK ++ L ++ LG
Sbjct: 59 SVGIESTIERYNRCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVR--TNRNLLGEDLG 116
Query: 111 TQTVEELTHQVRILQAQLTEVHQRLSYWSNPGNIESIEHLRQMENSLRESINQICLHKEN 170
V+EL R L+A LT QR +E +E LR+ E L + Q+ + E
Sbjct: 117 EMGVKELQALERQLEAALTATRQR----KTQVMMEEMEDLRKKERQLGDINKQLKIKFET 172
Query: 171 FG 172
G
Sbjct: 173 EG 174
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
GN=MADS57 PE=2 SV=2
Length = 241
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 107/204 (52%), Gaps = 32/204 (15%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K+ I+R++++++RQVT+SKRRNG+LKKA+ELSILCD ++ L++FS TGR L+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGR--LYEFS 58
Query: 61 RSNIEEVIARFAQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGASTQTVEELTHQ 120
+N++ VI R+ AK +L A ++ I AS L Q
Sbjct: 59 STNMKTVIDRYTN------AKEELLGGNA--------TSEIKIWQREAAS------LRQQ 98
Query: 121 VRILQAQLTEVHQRLSYWSNPGNIESIEHLRQMENSLRESINQICLHKENFGKQQLMSLE 180
+ LQ E H++L G + L+ +EN L S+ I + K+N K ++ L
Sbjct: 99 LHNLQ----ESHKQLMGEELSG--LGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELH 152
Query: 181 FAG----QSGMHLPLMMNVMQENQ 200
G Q + L +NVM + +
Sbjct: 153 VKGSLIHQENIELSRSLNVMSQQK 176
>sp|P29383|AGL3_ARATH Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3
PE=2 SV=2
Length = 258
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 90/166 (54%), Gaps = 35/166 (21%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K+++KR+E+ NRQVT++KRRNG+LKKA ELS+LCD +I LL+FS G+ F
Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60
Query: 61 RSNIEEVIAR-----FAQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGASTQTVE 115
S + + + +A + P + AK D QD+L ++ VE
Sbjct: 61 PSGMARTVDKYRKHSYATMDPNQSAK----------------DLQDKYQDYLKLKSR-VE 103
Query: 116 ELTHQVR-ILQAQLTEVHQRLSYWSNPGNIESIEHL-RQMENSLRE 159
L H R +L +L+E+ ++ +EHL RQ++ SLR+
Sbjct: 104 ILQHSQRHLLGEELSEM-----------DVNELEHLERQVDASLRQ 138
>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
GN=AGL19 PE=1 SV=1
Length = 219
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 38/207 (18%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
M R K ++KR+E+ ++RQVT+SKRRNG+LKKA ELS+LCD ++ L++FSP RS L+
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSP--RSKLYEFS 58
Query: 61 RSNIEEVIARFAQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGASTQTVEELTHQ 120
S+I I R+ Q R K + K+ D+ +D T+ +E+L
Sbjct: 59 SSSIAATIERY-----QRRIK-------EIGNNHKRNDNSQQARDETSGLTKKIEQLEIS 106
Query: 121 VRILQAQLTEVHQRLSYWSNPGNIESIEHLRQMENSLRESINQICLHKENFGKQQLMSLE 180
R L + + SIE L+Q+EN L S+++I K ++++ L+
Sbjct: 107 KRKLLGEGIDAC-------------SIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLK 153
Query: 181 FAGQSGMHLPLMMNVMQENQSL--SWL 205
+ N+++EN+ L WL
Sbjct: 154 AEER---------NLVKENKDLKEKWL 171
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K++IKR+E+T+NRQVT+ KRRNG+LKKA ELS+LCD ++ L++FS GR L+
Sbjct: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR--LYEYA 58
Query: 61 RSNIEEVIARF 71
++++ + R+
Sbjct: 59 NNSVKSTVERY 69
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 29/173 (16%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
M R K ++KR+E+ ++RQVT+SKRRNG+LKKA ELS+LCD ++ L++FSP G+ L+
Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGK--LYEFA 58
Query: 61 RSNIEEVIARFAQLTPQERAKRKL--ESLEALK----KTFKKLDH-DVNIQDFLGA--ST 111
SN+++ I R+ + T + + + E+++ LK KK++ + + + LG T
Sbjct: 59 SSNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGT 118
Query: 112 QTVEELTH-------QVRILQAQLTEVHQRLSYWSNPGNIESIEHLRQMENSL 157
++EEL V+ ++A+ T+V + E IE L+Q E +L
Sbjct: 119 CSIEELQQIEQQLEKSVKCIRARKTQVFK-----------EQIEQLKQKEKAL 160
>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
GN=AGL15 PE=1 SV=1
Length = 268
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 69/99 (69%), Gaps = 4/99 (4%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K++IKR+E+ ++RQVT+SKRR+G+LKKARELS+LCD ++ +++FS +G+ LF
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGK--LFEYS 58
Query: 61 RSNIEEVIARFA--QLTPQERAKRKLESLEALKKTFKKL 97
+ +++ ++R+ Q + +A+ ++ LK KL
Sbjct: 59 STGMKQTLSRYGNHQSSSASKAEEDCAEVDILKDQLSKL 97
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 58/72 (80%), Gaps = 2/72 (2%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K+ IKR+ ++++RQVT+SKRRNG+LKKA+EL+ILCD ++ +++FS TGR L+
Sbjct: 1 MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGR--LYDFS 58
Query: 61 RSNIEEVIARFA 72
S+++ VI R++
Sbjct: 59 SSSMKSVIERYS 70
>sp|Q03488|FBP1_PETHY Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1
Length = 210
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 73/104 (70%), Gaps = 2/104 (1%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K++IKR+E++SNRQVTYSKRRNGILKKA+E+S+LCD + +++F+ +G+ F
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSS- 59
Query: 61 RSNIEEVIARFAQLTPQERAKRKLESLEALKKTFKKLDHDVNIQ 104
+++ +++ ++ +LT + K E+L+ KK + ++ I+
Sbjct: 60 -TSLVDILDQYHKLTGRRLLDAKHENLDNEINKVKKDNDNMQIE 102
>sp|Q03416|GLOB_TOBAC Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2
SV=1
Length = 209
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 73/104 (70%), Gaps = 2/104 (1%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K++IKR+E++SNRQVTYSKRRNGILKKA+E+S+LCD + +++F+ +G+ F
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSS- 59
Query: 61 RSNIEEVIARFAQLTPQERAKRKLESLEALKKTFKKLDHDVNIQ 104
+++ +++ ++ +LT + K E+L+ KK + ++ I+
Sbjct: 60 -TSLVDILDQYHKLTGRRLWDAKHENLDNEINKVKKDNDNMQIE 102
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K+ I+R++++++RQVT+SKRRNGI KKA+EL+ILCD ++ L++FS TGR L+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGR--LYEYS 58
Query: 61 RSNIEEVIARFAQLTPQERA 80
++++ VI R+ + +++A
Sbjct: 59 STSMKSVIDRYGKSKDEQQA 78
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
+GR K++IKR+E+T+NRQVT+ KRRNG+LKKA ELS+LCD ++ L++FS GR L+
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR--LYEYA 74
Query: 61 RSNIEEVIARFAQ 73
++++ I R+ +
Sbjct: 75 NNSVKATIERYKK 87
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1
SV=1
Length = 242
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
+GR K++IKR+E+T+NRQVT+ KRRNG+LKKA ELS+LCD ++ L++FS GR L+
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR--LYEYA 74
Query: 61 RSNIEEVIARF 71
++++ I R+
Sbjct: 75 NNSVKATIERY 85
>sp|Q03378|GLOB_ANTMA Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1
SV=1
Length = 215
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 58/75 (77%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K++IKR+E++SNRQVTYSKRRNGI+KKA+E+S+LCD + +++F+ +G+ F
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSP 60
Query: 61 RSNIEEVIARFAQLT 75
+ + +++ + +L+
Sbjct: 61 STTLVDMLDHYHKLS 75
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
+GR K++IKR+E+T+NRQVT+ KRRNG+LKKA ELS+LCD ++ L++FS GR L+
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGR--LYEYA 74
Query: 61 RSNIEEVIARFAQ 73
++++ I R+ +
Sbjct: 75 NNSVKGTIERYKK 87
>sp|Q40168|AG_SOLLC Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1
PE=2 SV=1
Length = 248
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
+GR K++IKR+E+T+NRQVT+ KRRNG+LKKA ELS+LCD ++ L++FS GR L+
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGR--LYEYA 74
Query: 61 RSNIEEVIARFAQ 73
++++ I R+ +
Sbjct: 75 NNSVKATIERYKK 87
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 28/165 (16%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K++IKR+E+++NRQVT+ KRRNG+LKKA ELS+LCD ++ L++FS GR L+
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGR--LYEYA 58
Query: 61 RSNIEEVIARFAQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGAS-TQTVEELTH 119
+NI I R+ KK + +Q+ A Q +L
Sbjct: 59 NNNIRSTIERY-------------------KKACSDSTNTSTVQEINAAYYQQESAKLRQ 99
Query: 120 QVRILQAQLTEVHQRLSYWSNPGNIESIEHLRQMENSLRESINQI 164
Q++ +Q + + + + S++ L+Q+EN L ++I++I
Sbjct: 100 QIQTIQ------NSNRNLMGDSLSSLSVKELKQVENRLEKAISRI 138
>sp|Q9XJ66|MAD22_ORYSJ MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica
GN=MADS22 PE=2 SV=1
Length = 228
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
M R + +IKR+ES + RQVT+SKRR G+ KKA ELS+LCD D+ L++FS TG+ L H
Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGK--LSHFA 58
Query: 61 RSNIEEVIARF 71
S++ E+I ++
Sbjct: 59 SSSMNEIIDKY 69
>sp|Q2QW53|MAD13_ORYSJ MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica
GN=MADS13 PE=1 SV=2
Length = 270
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 94/165 (56%), Gaps = 25/165 (15%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLF-HG 59
MGR +++IKR+E+T++RQVT+ KRRNG+LKKA ELS+LCD ++ L++FS GR L+ +
Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR--LYEYS 58
Query: 60 QRSNIEEVIARFAQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGASTQTVEELTH 119
+N++ I R+ + A T +VN Q + Q +L H
Sbjct: 59 NNNNVKATIDRY-------------KKAHACGSTSGAPLIEVNAQQYY---QQESAKLRH 102
Query: 120 QVRILQAQLTEVHQRLSYWSNPGNIESIEHLRQMENSLRESINQI 164
Q+++LQ T H N N+ S++ L+Q+E+ L + I++I
Sbjct: 103 QIQMLQN--TNKH---LVGDNVSNL-SLKELKQLESRLEKGISKI 141
>sp|Q9M2K8|AGL18_ARATH Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana
GN=AGL18 PE=2 SV=1
Length = 256
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR +++IK++E+ ++RQVT+SKRRNG++KKA+ELSILCD ++ L++FS TG+ ++
Sbjct: 1 MGRGRIEIKKIENINSRQVTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGK--IYDFS 58
Query: 61 RSNIEEVIARFAQLTPQERAKRKLE 85
+E++++R+ T K++ E
Sbjct: 59 SVCMEQILSRYGYTTASTEHKQQRE 83
>sp|P29381|AGL1_ARATH Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana
GN=AGL1 PE=1 SV=1
Length = 248
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
+GR K++IKR+E+T+NRQVT+ KRRNG+LKKA ELS+LCD ++ L++FS GR L+
Sbjct: 16 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGR--LYEYA 73
Query: 61 RSNIEEVIARFAQ 73
+++ I R+ +
Sbjct: 74 NNSVRGTIERYKK 86
>sp|Q0D4T4|MAD18_ORYSJ MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica
GN=MADS18 PE=1 SV=1
Length = 249
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR ++++R+E+ NRQVT+SKRRNG+LKKA E+S+LCD D+ L++FS G+ F
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 60
Query: 61 RSNIEEVIARFAQLTPQERA 80
S++E ++ R+ + + ERA
Sbjct: 61 -SSMEGILERYQRYSFDERA 79
>sp|A2YNI2|MAD18_ORYSI MADS-box transcription factor 18 OS=Oryza sativa subsp. indica
GN=MADS18 PE=2 SV=2
Length = 249
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR ++++R+E+ NRQVT+SKRRNG+LKKA E+S+LCD D+ L++FS G+ F
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 60
Query: 61 RSNIEEVIARFAQLTPQERA 80
S++E ++ R+ + + ERA
Sbjct: 61 -SSMEGILERYQRYSFDERA 79
>sp|Q01540|AG_BRANA Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2
SV=1
Length = 252
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Query: 2 GRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQR 61
GR K++IKR+E+T+NRQVT+ KRRNG+LKKA ELS+LCD ++ L++FS GR L+
Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR--LYEYSN 75
Query: 62 SNIEEVIARFAQ 73
++++ I R+ +
Sbjct: 76 NSVKGTIERYKK 87
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K++IKR+++ ++RQVT+SKRR+G+ KKARELSILCD ++ LL+FS T R L+
Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSR--LYDFA 58
Query: 61 RSNIEEVIARF 71
S+++ +I R+
Sbjct: 59 SSSMKSIIERY 69
>sp|P29385|AGL5_ARATH Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana
GN=AGL5 PE=1 SV=1
Length = 246
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
+GR K++IKR+E+T+NRQVT+ KRRNG+LKKA ELS+LCD ++ L++FS GR L+
Sbjct: 16 IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGR--LYEYA 73
Query: 61 RSNIEEVIARFAQ 73
+++ I R+ +
Sbjct: 74 NNSVRGTIERYKK 86
>sp|P17839|AG_ARATH Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG
PE=1 SV=2
Length = 252
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Query: 2 GRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQR 61
GR K++IKR+E+T+NRQVT+ KRRNG+LKKA ELS+LCD ++ L++FS GR L+
Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR--LYEYSN 75
Query: 62 SNIEEVIARFAQ 73
++++ I R+ +
Sbjct: 76 NSVKGTIERYKK 87
>sp|Q8RU31|MAD21_ORYSJ MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica
GN=MADS21 PE=2 SV=1
Length = 265
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 24/164 (14%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K++IKR+E+ ++RQVT+ KRRNG+LKKA EL+ILCD +I L++FS GR F
Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEF--- 57
Query: 61 RSNIEEVIARFAQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGASTQTVEELTHQ 120
SN+ + ER K+ S DVN + Q ++ HQ
Sbjct: 58 -SNVNSTRSTI------ERYKKASASTSGSAPVI-----DVNSHQYF---QQEAAKMRHQ 102
Query: 121 VRILQAQLTEVHQRLSYWSNPGNIESIEHLRQMENSLRESINQI 164
++ LQ R + GN+ + E L+ +EN L + I++I
Sbjct: 103 IQTLQNA-----NRHLIGESIGNMTAKE-LKSLENRLEKGISRI 140
>sp|Q9FUY6|JOIN_SOLLC MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1
Length = 265
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 45/207 (21%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
M R K++IK++++++ RQVT+SKRR G+ KKA ELS+LCD D+ L++FS TG+ LF
Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGK--LFDYS 58
Query: 61 RSNIEEVIARFAQLTPQERAKRKLESLEALKKTFKKLDH-DVNIQDFLGAS----TQTVE 115
S++++++ R R L S K +KLD + +Q ++ ++ +
Sbjct: 59 SSSMKQILER-----------RDLHS-----KNLEKLDQPSLELQLVENSNYSRLSKEIS 102
Query: 116 ELTHQVRILQAQLTEVHQRLSYWSNPGNIESIEHLRQMENSLRESINQICLHKENFGKQQ 175
E +H++R ++ E Q L +IE L+Q+E SL ++++ K G +
Sbjct: 103 EKSHRLRQMRG---EELQGL----------NIEELQQLERSLETGLSRVIERK---GDKI 146
Query: 176 LMSLEFAGQSGMHLPLMMNVMQENQSL 202
+ + Q GMHL M+EN+ L
Sbjct: 147 MREINQLQQKGMHL------MEENEKL 167
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 99/179 (55%), Gaps = 21/179 (11%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR ++++KR+E+ NRQVT+SKRRNG+LKKA ELS+LCD ++ L++FS G+ L+
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGK--LYEFG 58
Query: 61 RSNIEEVIARF------AQ-----LTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGA 109
+ I + + R+ AQ L+ + ++ L+A + ++ + +D
Sbjct: 59 SAGITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPL 118
Query: 110 STQTVEELTHQVRILQAQLTEVHQRLSYWSNPGNIESIEHLRQMENSLRESINQICLHK 168
S + +++L Q L+ L++ QR + +E +E LR+ E L E IN+ HK
Sbjct: 119 SVKELQQLEKQ---LECALSQARQRKTQLM----MEQVEELRRKERQLGE-INRQLKHK 169
>sp|Q6Q9I2|MAD15_ORYSJ MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica
GN=MADS15 PE=1 SV=2
Length = 267
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLF-HG 59
MGR K+++KR+E+ NRQVT+SKRRNG+LKKA E+S+LCD ++ ++FSP G+ L+ +
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGK--LYEYA 58
Query: 60 QRSNIEEVIARFAQLTPQERA 80
S +++++ R+ + + E+A
Sbjct: 59 TDSRMDKILERYERYSYAEKA 79
>sp|Q40702|MADS2_ORYSJ MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica
GN=MADS2 PE=2 SV=1
Length = 209
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 71/104 (68%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K++IKR+E+++NRQVT+SKRR+GILKKARE+S+LCD ++ +++FS G+ +
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
Query: 61 RSNIEEVIARFAQLTPQERAKRKLESLEALKKTFKKLDHDVNIQ 104
++++ ++ ++ + + K +SL A KK + ++ I+
Sbjct: 61 KTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIE 104
>sp|Q8RYD9|TT16_ARATH Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1
SV=1
Length = 252
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 55/71 (77%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K++IK++E+ + RQVT+SKRR G++KK RELSILCD I L++FS TG+ + F +
Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE 60
Query: 61 RSNIEEVIARF 71
++ + ++I R+
Sbjct: 61 QNRMPQLIDRY 71
>sp|Q9ATE5|FBP24_PETHY MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1
Length = 268
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 55/75 (73%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K+++KR+E+ ++RQVT+SKRR G+LKK ELS+LCD I L++FS G+ + Q
Sbjct: 4 MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQ 63
Query: 61 RSNIEEVIARFAQLT 75
++ ++I+R+ Q T
Sbjct: 64 PHSMSQIISRYLQTT 78
>sp|Q2V0P1|MAD58_ORYSJ MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica
GN=MADS58 PE=2 SV=1
Length = 272
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Query: 2 GRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQR 61
R K++IKR+E+T+NRQVT+ KRR+G+LKKA ELS+LCD ++ L++FS GR L+
Sbjct: 44 SRGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGR--LYEYSN 101
Query: 62 SNIEEVIARFAQ 73
++++E I R+ +
Sbjct: 102 NSVKETIERYKK 113
>sp|O82794|AGL24_ARATH MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1
Length = 220
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
M R K++IK++++ + RQVT+SKRR GI KKA ELS+LCD D+ L++FS TG+ LF
Sbjct: 1 MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGK--LFEFS 58
Query: 61 RSNIEEVIARFA 72
S + +++ R++
Sbjct: 59 SSRMRDILGRYS 70
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8
PE=1 SV=1
Length = 242
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 111/214 (51%), Gaps = 40/214 (18%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLF-HG 59
MGR ++++KR+E+ NRQVT+SKRR+G+LKKA E+S+LCD ++ L++FS G+ LF +
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGK--LFEYS 58
Query: 60 QRSNIEEVIARF-------AQLTPQE------------RAKRKLESLEALKKTFKKLDHD 100
S +E ++ R+ QL ++ + K ++E LE K+ F D D
Sbjct: 59 TDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLD 118
Query: 101 VNIQDFLGASTQTVEELTHQVRILQAQLTEVHQRLSYWSNPGNIESIEHLRQMENSLRES 160
S + ++ L HQ L A + + R N ESI L++ + +L++
Sbjct: 119 -------SLSLKELQSLEHQ---LDAAIKSIRSR----KNQAMFESISALQKKDKALQDH 164
Query: 161 ----INQICLHKENFGKQQLMSLEFAGQSGMHLP 190
+ +I ++ G+Q+ ++ + S + LP
Sbjct: 165 NNSLLKKIKEREKKTGQQEGQLVQCSNSSSVLLP 198
>sp|Q07474|MADS2_PETHY Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2
SV=1
Length = 212
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 47/53 (88%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGR 53
MGR K++IKR+E++SNRQVTYSKRRNGI+KKA+E+++LCD + L++F +G+
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGK 53
>sp|Q9S7Q7|FLC_ARATH MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC
PE=2 SV=1
Length = 196
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR KL+IKR+E+ S+RQVT+SKRRNG+++KAR+LS+LCD + LL+ S +G+ F
Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSF-SS 59
Query: 61 RSNIEEVIARFAQ 73
N+ +++ R+ +
Sbjct: 60 GDNLVKILDRYGK 72
>sp|Q8VWM8|M17_MAIZE MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1
Length = 259
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 55/75 (73%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K++IKR+E+++NRQVT+SKRR G+LKKA EL++LCD + +++FS TG+ +
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60
Query: 61 RSNIEEVIARFAQLT 75
++ E+I ++ T
Sbjct: 61 ACSLRELIEQYQHAT 75
>sp|Q40170|AGL8_SOLLC Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum
GN=TDR4 PE=2 SV=1
Length = 227
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 101/181 (55%), Gaps = 30/181 (16%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLF-HG 59
MGR ++++KR+E+ NRQVT+SKRR+G+LKKA E+S+LCD ++ L++FS G+ LF +
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGK--LFEYA 58
Query: 60 QRSNIEEVIARF-------AQLTPQERAK--------RKLES-LEALKKTFKKLDHDVNI 103
S +E ++ R+ QL P + RKL++ LE L++ K H V
Sbjct: 59 NDSCMERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQK---HYVG- 114
Query: 104 QDFLGASTQTVEELTHQVRILQAQLTEVHQRLSYWSNPGNIESIEHLRQMENSLRESINQ 163
+D S + ++ L HQ L + L + R N ESI L++ + +L+E NQ
Sbjct: 115 EDLESLSMKELQNLEHQ---LDSALKHIRSR----KNQLMHESISVLQKKDRALQEQNNQ 167
Query: 164 I 164
+
Sbjct: 168 L 168
>sp|Q9FVC1|SVP_ARATH MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1
Length = 240
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
M R K++I+++++ + RQVT+SKRR G+ KKA ELS+LCD D+ L++FS TG+ LF
Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGK--LFEFC 58
Query: 61 RSNIEEVIAR 70
S+++EV+ R
Sbjct: 59 SSSMKEVLER 68
>sp|P0C5B2|MAD56_ORYSJ MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica
GN=MADS56 PE=2 SV=1
Length = 233
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 95/182 (52%), Gaps = 30/182 (16%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
M R + ++KR+E+ ++RQVT+SKRRNG+LKKA ELS+LCD ++ L++FSP GR F
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 61 RSNIEEVIARFAQLTPQERAKRKLESLEALKKTFKKLDHDVNIQDFLGASTQTVEELTHQ 120
S +++ I R+ T KT ++ V D LG + + +E L
Sbjct: 61 PS-LQKTIDRYKAYTKD----------HVNNKTIQQDIQQVK-DDTLGLA-KKLEALDES 107
Query: 121 VRILQAQLTEVHQRLSYWSNPGNIE--SIEHLRQMENSLRESINQICLHKENFGKQQLMS 178
R + + N+E SIE LR +E L +S+++I L K +QQ+
Sbjct: 108 RRKILGE---------------NLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAK 152
Query: 179 LE 180
L+
Sbjct: 153 LK 154
>sp|Q39081|CAL_ARATH Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL
PE=1 SV=3
Length = 255
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 60/80 (75%), Gaps = 3/80 (3%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLF-HG 59
MGR ++++KR+E+ NRQVT+SKRR G+LKKA+E+S+LCD ++ L++FS G+ LF +
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGK--LFEYS 58
Query: 60 QRSNIEEVIARFAQLTPQER 79
S +E+V+ R+ + + ER
Sbjct: 59 SESCMEKVLERYERYSYAER 78
>sp|Q6H711|MAD29_ORYSJ MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica
GN=MADS29 PE=2 SV=1
Length = 260
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 54/75 (72%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
MGR K++IKR+E+ +NRQVT+SKRR G+LKKA EL++LCD + +++FS TG+ +
Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60
Query: 61 RSNIEEVIARFAQLT 75
++ E+I + +T
Sbjct: 61 TCSLRELIEHYQTVT 75
>sp|P0C5B1|MAD14_ORYSI MADS-box transcription factor 14 OS=Oryza sativa subsp. indica
GN=MADS14 PE=2 SV=1
Length = 246
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLF-HG 59
MGR K+++KR+E+T NRQVT+SKRR+G+LKKA E+S+LCD ++ L++FS G+ L+ +
Sbjct: 1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGK--LYKYA 58
Query: 60 QRSNIEEVIARFAQLTPQERA 80
S +++++ R+ + + E+
Sbjct: 59 TDSCMDKILERYERYSYAEKV 79
>sp|Q9XJ60|MAD50_ORYSJ MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica
GN=MADS50 PE=2 SV=1
Length = 230
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 59/234 (25%)
Query: 1 MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIDIVLLMFSPTGRSTLFHGQ 60
M R K ++KR+E+ ++RQVT+SKRRNG+LKKA ELS+LCD ++ L++FSP G+ L+
Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGK--LYEFA 58
Query: 61 RSNIEEVIARFAQLTPQ-----------ERAK-------RKLESLEALKKTF--KKLDHD 100
++ ++ I R+ T + E+ K +KLE+LE K+ +KLD
Sbjct: 59 SASTQKTIERYRTYTKENIGNKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKLDE- 117
Query: 101 VNIQDFLGASTQTVEELTHQVRI-LQAQLTEVHQRLSYWSNPGNIESIEHLRQMENSLR- 158
++EEL H + + L+ L + R + E + LR+ E LR
Sbjct: 118 -----------CSIEEL-HSLEVKLERSLISIRGRKTKLLE----EQVAKLREKEMKLRK 161
Query: 159 --ESINQICLHKENFGKQQLMSLEFAGQSGMHLPLMMNVMQENQSLSWLPNNDN 210
E + + C Q + PL + EN + NDN
Sbjct: 162 DNEELREKC----------------KNQPPLSAPLTVRAEDENPDRNINTTNDN 199
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,600,586
Number of Sequences: 539616
Number of extensions: 5771781
Number of successful extensions: 12537
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 12328
Number of HSP's gapped (non-prelim): 252
length of query: 360
length of database: 191,569,459
effective HSP length: 119
effective length of query: 241
effective length of database: 127,355,155
effective search space: 30692592355
effective search space used: 30692592355
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)