BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018116
(360 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 304 bits (779), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 153/348 (43%), Positives = 218/348 (62%), Gaps = 3/348 (0%)
Query: 14 ELFEGHGQVIRLVFNHLSAMSLKGAVELGIADIIHSHGRPITLSELVSALKIQPTKTSNL 73
E+F+ + + ++ + +MSLK ++E+ I +IIH+HG+PITLS LVS L+I TK N+
Sbjct: 12 EIFKAQALLYKNMYAFVDSMSLKWSIEMNIPNIIHNHGKPITLSNLVSILQIPSTKVDNV 71
Query: 74 FRFMRLLVHMGLFSK-TKVGGEKEEEAYGLTAISALLIKDKSYCLSPLVSGILDPENIFP 132
R MR L H G F T E EEEAY LT S LL+K CL+P+V +LDP
Sbjct: 72 QRLMRYLAHNGFFEIITNQELENEEEAYALTVASELLVKGTELCLAPMVECVLDPTLSTS 131
Query: 133 LHFISKWFKGNDISVWETVHGKNYWDYMNQNPGLSQRFNQAMISDSEMAIFIVKDCCRKI 192
H + KW D++++ G + W+++N+NP + +N A+ SDS+M +KDC +
Sbjct: 132 FHNLKKWVYEEDLTLFAVNLGCDLWEFLNKNPEYNTLYNDALASDSKMINLAMKDC-NLV 190
Query: 193 FEXXXXXXXXXXXXXXFSKIISEAFPGIKCTVLDLPHAVANMPQTENLKYIAGDMFQYIP 252
FE KII E FP + C V D P V N+ + NL Y+ GDMF +P
Sbjct: 191 FEGLESIVDVGGGNGTTGKIICETFPKLTCVVFDRPKVVENLCGSNNLTYVGGDMFISVP 250
Query: 253 PADAYFFKLVFHAFGDEDCLKILKKCREAIAGNGERGKVLIMDIVINEKEDKHQVTEAKL 312
ADA K V H + D+DC+KILKKC+EA+ +G+RGKV+++D+VINEK+D++Q+T+ KL
Sbjct: 251 KADAVLLKAVLHDWTDKDCIKILKKCKEAVTSDGKRGKVIVIDMVINEKKDENQLTQIKL 310
Query: 313 LGDTLMSVSVDGKERTDEEWKTLFLDAGFTHYKITNVFGLKSLIEVYP 360
L + +S V+GKER +EEWK LF++AGF YKI+ GL SLIE+YP
Sbjct: 311 LMNVTIS-CVNGKERNEEEWKKLFIEAGFQDYKISPFTGLMSLIEIYP 357
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 301 bits (772), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/347 (42%), Positives = 218/347 (62%), Gaps = 6/347 (1%)
Query: 14 ELFEGHGQVIRLVFNHLSAMSLKGAVELGIADIIHSHGRPITLSELVSALKIQPTKTSNL 73
E+F+ + + ++ + +MSLK AVE+ I +II +HG+PI+LS LVS L++ +K N+
Sbjct: 12 EIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNV 71
Query: 74 FRFMRLLVHMGLFSKTKVGGEKEEEAYGLTAISALLIKDKSYCLSPLVSGILDPENIFPL 133
R MR L H G F KEEE+Y LT S LL++ CL+P+V +LDP
Sbjct: 72 RRLMRYLAHNGFFEIIT----KEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSY 127
Query: 134 HFISKWFKGNDISVWETVHGKNYWDYMNQNPGLSQRFNQAMISDSEMAIFIVKDCCRKIF 193
H + KW D++++ G +WD++++NP + FN AM SDS++ ++DC +F
Sbjct: 128 HELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDC-DFVF 186
Query: 194 EXXXXXXXXXXXXXXFSKIISEAFPGIKCTVLDLPHAVANMPQTENLKYIAGDMFQYIPP 253
+ +KII E FP +KC V D P V N+ + NL Y+ GDMF IP
Sbjct: 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPN 246
Query: 254 ADAYFFKLVFHAFGDEDCLKILKKCREAIAGNGERGKVLIMDIVINEKEDKHQVTEAKLL 313
ADA K + H + D+DCL+ILKKC+EA+ +G+RGKV I+D+VI++K+D++QVT+ KLL
Sbjct: 247 ADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLL 306
Query: 314 GDTLMSVSVDGKERTDEEWKTLFLDAGFTHYKITNVFGLKSLIEVYP 360
D M+ ++GKER +EEWK LF++AGF HYKI+ + G SLIE+YP
Sbjct: 307 MDVNMAC-LNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 287 bits (734), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 144/352 (40%), Positives = 211/352 (59%), Gaps = 6/352 (1%)
Query: 9 GISVRELFEGHGQVIRLVFNHLSAMSLKGAVELGIADIIHSHGRPITLSELVSALKIQPT 68
G E+F+ + + ++ + + SLK AVE I +II +HG+PI+LS LVS L++ +
Sbjct: 7 GRKPSEIFKAQALLYKHIYAFIDSXSLKWAVEXNIPNIIQNHGKPISLSNLVSILQVPSS 66
Query: 69 KTSNLFRFMRLLVHMGLFSKTKVGGEKEEEAYGLTAISALLIKDKSYCLSPLVSGILDPE 128
K N+ R R L H G F KEEE+Y LT S LL++ CL+P V +LDP
Sbjct: 67 KIGNVRRLXRYLAHNGFFEIIT----KEEESYALTVASELLVRGSDLCLAPXVECVLDPT 122
Query: 129 NIFPLHFISKWFKGNDISVWETVHGKNYWDYMNQNPGLSQRFNQAMISDSEMAIFIVKDC 188
H + KW D++++ G +WD++++NP + FN A SDS++ ++DC
Sbjct: 123 LSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAXASDSKLINLALRDC 182
Query: 189 CRKIFEXXXXXXXXXXXXXXFSKIISEAFPGIKCTVLDLPHAVANMPQTENLKYIAGDMF 248
+F+ +KII E FP +KC V D P V N+ + NL Y+ GD F
Sbjct: 183 -DFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDXF 241
Query: 249 QYIPPADAYFFKLVFHAFGDEDCLKILKKCREAIAGNGERGKVLIMDIVINEKEDKHQVT 308
IP ADA K + H + D+DCL+ILKKC+EA+ +G+RGKV I+D VI++K+D++QVT
Sbjct: 242 TSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDXVIDKKKDENQVT 301
Query: 309 EAKLLGDTLMSVSVDGKERTDEEWKTLFLDAGFTHYKITNVFGLKSLIEVYP 360
+ KLL D + ++GKER +EEWK LF++AGF HYKI+ + G SLIE+YP
Sbjct: 302 QIKLLXD-VNXACLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 283 bits (723), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/359 (43%), Positives = 220/359 (61%), Gaps = 8/359 (2%)
Query: 9 GISVRELFEGHGQVIRLVFNHLSAMSLKGAVELGIADIIHSHGRPITLSELVSALKIQPT 68
G EL+ + + V+N +S+M+LK A+ELGIAD IH+HG+P+TLSEL S+LK+ P+
Sbjct: 1 GSEESELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPS 60
Query: 69 KTSNLFRFMRLLVHMGLFSKTKVGGEKEEE----AYGLTAISALLIKDKSYCLSPLVSGI 124
K + L RF+RLL H G F+KT V G++ +E AY LT S LLI K CLS +V G
Sbjct: 61 KVNILHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGA 120
Query: 125 LDPENIFPLHFISKWF-KGNDISVWETVHGKNYWDYMNQNPGLS--QRFNQAMISDSEMA 181
L P ++ KWF + + +++E G+++WD++N++ S F AM SDS M
Sbjct: 121 LHPSSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMF 180
Query: 182 IFIVKDCCRKIFEXXXXXXXXXXXXXXFSKIISEAFPGIKCTVLDLPHAVANMPQTENLK 241
++++ +++FE +K+I E FP +KCTV D P V N+ ENL
Sbjct: 181 KLVLQEN-KRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLN 239
Query: 242 YIAGDMFQYIPPADAYFFKLVFHAFGDEDCLKILKKCREAIAGNGERGKVLIMDIVINEK 301
++ GDMF+ IP ADA K V H + DE LKILK +EAI+ G+ GKV+I+DI I+E
Sbjct: 240 FVGGDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDET 299
Query: 302 EDKHQVTEAKLLGDTLMSVSVDGKERTDEEWKTLFLDAGFTHYKITNVFGLKSLIEVYP 360
D +TE +L D +M GKERT +EW+ L DAGF+ YKIT + G KSLIEVYP
Sbjct: 300 SDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 358
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 283 bits (723), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 156/354 (44%), Positives = 219/354 (61%), Gaps = 8/354 (2%)
Query: 14 ELFEGHGQVIRLVFNHLSAMSLKGAVELGIADIIHSHGRPITLSELVSALKIQPTKTSNL 73
EL+ + + V+N +S+M+LK A+ELGIAD IH+HG+P+TLSEL S+LK+ P+K + L
Sbjct: 5 ELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNIL 64
Query: 74 FRFMRLLVHMGLFSKTKVGGEKEEE----AYGLTAISALLIKDKSYCLSPLVSGILDPEN 129
RF+RLL H G F+KT V G++ +E AY LT S LLI K CLS +V G L P +
Sbjct: 65 HRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSS 124
Query: 130 IFPLHFISKWF-KGNDISVWETVHGKNYWDYMNQNPGLS--QRFNQAMISDSEMAIFIVK 186
+ KWF + + +++E G+++WD++N++ S F AM SDS M +++
Sbjct: 125 LDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVLQ 184
Query: 187 DCCRKIFEXXXXXXXXXXXXXXFSKIISEAFPGIKCTVLDLPHAVANMPQTENLKYIAGD 246
+ +++FE +K+I E FP +KCTV D P V N+ ENL ++ GD
Sbjct: 185 EN-KRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGD 243
Query: 247 MFQYIPPADAYFFKLVFHAFGDEDCLKILKKCREAIAGNGERGKVLIMDIVINEKEDKHQ 306
MF+ IP ADA K V H + DE LKILK +EAI+ G+ GKV+I+DI I+E D
Sbjct: 244 MFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRG 303
Query: 307 VTEAKLLGDTLMSVSVDGKERTDEEWKTLFLDAGFTHYKITNVFGLKSLIEVYP 360
+TE +L D +M GKERT +EW+ L DAGF+ YKIT + G KSLIEVYP
Sbjct: 304 LTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 357
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 282 bits (722), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/354 (44%), Positives = 219/354 (61%), Gaps = 8/354 (2%)
Query: 14 ELFEGHGQVIRLVFNHLSAMSLKGAVELGIADIIHSHGRPITLSELVSALKIQPTKTSNL 73
EL+ + + V+N +S+M+LK A+ELGIAD IH+HG+P+TLSEL S+LK+ P+K + L
Sbjct: 2 ELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNIL 61
Query: 74 FRFMRLLVHMGLFSKTKVGGEKEEE----AYGLTAISALLIKDKSYCLSPLVSGILDPEN 129
RF+RLL H G F+KT V G++ +E AY LT S LLI K CLS +V G L P +
Sbjct: 62 HRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSS 121
Query: 130 IFPLHFISKWF-KGNDISVWETVHGKNYWDYMNQNPGLS--QRFNQAMISDSEMAIFIVK 186
+ KWF + + +++E G+++WD++N++ S F AM SDS M +++
Sbjct: 122 LDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVLQ 181
Query: 187 DCCRKIFEXXXXXXXXXXXXXXFSKIISEAFPGIKCTVLDLPHAVANMPQTENLKYIAGD 246
+ +++FE +K+I E FP +KCTV D P V N+ ENL ++ GD
Sbjct: 182 EN-KRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGD 240
Query: 247 MFQYIPPADAYFFKLVFHAFGDEDCLKILKKCREAIAGNGERGKVLIMDIVINEKEDKHQ 306
MF+ IP ADA K V H + DE LKILK +EAI+ G+ GKV+I+DI I+E D
Sbjct: 241 MFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRG 300
Query: 307 VTEAKLLGDTLMSVSVDGKERTDEEWKTLFLDAGFTHYKITNVFGLKSLIEVYP 360
+TE +L D +M GKERT +EW+ L DAGF+ YKIT + G KSLIEVYP
Sbjct: 301 LTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 354
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 157/329 (47%), Gaps = 23/329 (6%)
Query: 33 MSLKGAVELGIADIIHSHGRP---ITLSELVSALKI-QPTKTSNLFRFMRLLVHMGLFSK 88
M+LK A+EL + +I+ P I+ +E+ + L P L R +RLL + +
Sbjct: 36 MALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTY 95
Query: 89 T--KVGGEKEEEAYGLTAISALLIKDK-SYCLSPLVSGILDPENIFPLHFISKWFKGNDI 145
T ++ K E YGL + L K++ L+P + +L + + + WF D
Sbjct: 96 TLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFL--LLATDKVL----LEPWFYLKDA 149
Query: 146 SV-----WETVHGKNYWDYMNQNPGLSQRFNQAMISDSEMAIFIVKDCCRKIFEXXXXXX 200
+ + +G N +DY + +++ FN+ M S+S + + + + FE
Sbjct: 150 ILEGGIPFNKAYGMNIFDYHGTDHRINKVFNKGMSSNSTITMKKILEMYNG-FEGLTTIV 208
Query: 201 XXXXXXXXFSKIISEAFPGIKCTVLDLPHAVANMPQTENLKYIAGDMFQYIPPADAYFFK 260
+ +I +P I DLPH + + P ++++ GDMF +P DA F K
Sbjct: 209 DVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAIFIK 268
Query: 261 LVFHAFGDEDCLKILKKCREAIAGNGERGKVLIMDIVINEKEDKHQVTEAKLLGDTLM-S 319
+ H + DE CLK+LK C A+ + GKV++ + ++ D T+ + D LM +
Sbjct: 269 WICHDWSDEHCLKLLKNCYAALP---DHGKVIVAEYILPPSPDPSIATKVVIHTDALMLA 325
Query: 320 VSVDGKERTDEEWKTLFLDAGFTHYKITN 348
+ GKERT++E++ L + +GF +K+ +
Sbjct: 326 YNPGGKERTEKEFQALAMASGFRGFKVAS 354
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 167/349 (47%), Gaps = 22/349 (6%)
Query: 25 LVFNHLSAMSLKGAVELGIADIIHSHGRP---ITLSELVSALKIQPTKT---SNLFRFMR 78
L N + L A++L + +II P ++ SE+ S L + + L R +R
Sbjct: 31 LTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLR 90
Query: 79 LLVHMGLFSKTKVGGEK--EEEAYGLTAISALLIKDKSYC-LSPLVSGILDPENIFPLHF 135
LL + + T E E YGL+ + L+ D+S L+ + + P +
Sbjct: 91 LLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMN 150
Query: 136 ISKWFKGNDISVWETVHGKNYWDYMNQNPGLSQRFNQAMIS--DSEMAIFIVKDCCRKIF 193
+ DI +++ VHG +++M ++ ++Q FN++M+ +EM + F
Sbjct: 151 FKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLE---IYTGF 207
Query: 194 EXXXXXXXXXXXXXXFSKIISEAFPGIKCTVLDLPHAVANMPQTENLKYIAGDMFQYIPP 253
E ++I +P IK DLP + N P ++++ GDMF +P
Sbjct: 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQ 267
Query: 254 ADAYFFKLVFHAFGDEDCLKILKKCREAIAGNGERGKVLIMDIVINEKEDKHQVTEAKLL 313
DA K V H + DE C++ L C +A++ N GKV+I++ ++ E+ + + E+KL+
Sbjct: 268 GDAMILKAVCHNWSDEKCIEFLSNCHKALSPN---GKVIIVEFILPEEPNTSE--ESKLV 322
Query: 314 G--DTLMSVSVDGKERTDEEWKTLFLDAGFTHYKIT-NVFGLKSLIEVY 359
D LM ++V G+ERT+++++ L +GF+ +++ F ++E Y
Sbjct: 323 STLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFY 371
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 156/337 (46%), Gaps = 24/337 (7%)
Query: 23 IRLVFNHLSAMSLKGAVELGIADIIHSHGRPITLS--ELVSAL-KIQPTKTSNLFRFMRL 79
++L + M LK A+EL + +II G +S E+ S L P L R +RL
Sbjct: 24 MQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRL 83
Query: 80 LVHMGLFS---KTKVGGEKEEEAYGLTAISALLIKDK-SYCLSPLVSGILDPENIFPLHF 135
L + + +T+ G K + YGL ++ L+K++ +S L +++ + +
Sbjct: 84 LACYIILTCSVRTQQDG-KVQRLYGLATVAKYLVKNEDGVSISAL--NLMNQDKVL---- 136
Query: 136 ISKWFKGNDISV-----WETVHGKNYWDYMNQNPGLSQRFNQAMISDSEMAIFIVKDCCR 190
+ W+ D + + +G ++Y +P ++ FN+ M S + + + +
Sbjct: 137 MESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYT 196
Query: 191 KIFEXXXXXXXXXXXXXXFSKIISEAFPGIKCTVLDLPHAVANMPQTENLKYIAGDMFQY 250
FE I +P IK DLPH + + P ++++ GDMF
Sbjct: 197 G-FEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVS 255
Query: 251 IPPADAYFFKLVFHAFGDEDCLKILKKCREAIAGNGERGKVLIMDIVINEKEDKHQVTEA 310
IP ADA F K + H + DE CLK LK C EA+ N GKV++ + ++ D T+
Sbjct: 256 IPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDN---GKVIVAECILPVAPDSSLATKG 312
Query: 311 KLLGDTLM-SVSVDGKERTDEEWKTLFLDAGFTHYKI 346
+ D +M + + GKERT +E++ L AGF +K+
Sbjct: 313 VVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKV 349
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 157/349 (44%), Gaps = 24/349 (6%)
Query: 22 VIRLVFNHLSAMSLKGAVELGIADI-IHSHGRPITLSELVSAL--KIQPTKTSNLFRFMR 78
++L + + M+LK A+ELG+ +I + + G+ +T +E+ + L P + R +R
Sbjct: 24 ALQLASSSVLPMTLKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILR 83
Query: 79 LLVHMGLFSKTKVGGE--KEEEAYGLTAISALLIKDKSYCLSPLVSGILDPENIFPLHFI 136
LL + + G+ + +YG + L ++ +S +++ + + +
Sbjct: 84 LLASYNVVTCLVEEGKDGRLSRSYGAAPVCKFLTPNED-GVSMAALALMNQDKVL----M 138
Query: 137 SKWFKGNDISV-----WETVHGKNYWDYMNQNPGLSQRFNQAMISDSEMAIFIVKDCCRK 191
W+ D + + +G + ++Y +P ++ FN+ M + S I I K
Sbjct: 139 ESWYYLKDAVLDGGIPFNKAYGMSAFEYHGTDPRFNRVFNEGMKNHS---IIITKKLLEL 195
Query: 192 I--FEXXXXXXXXXXXXXXFSKIISEAFPGIKCTVLDLPHAVANMPQTENLKYIAGDMFQ 249
FE I+ +P IK DLPH ++ PQ + ++ GDMF+
Sbjct: 196 YHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFK 255
Query: 250 YIPPADAYFFKLVFHAFGDEDCLKILKKCREAIAGNGERGKVLIMDIVINEKEDKHQVTE 309
+P D K + H + D+ C +LK C +A+ + GKV+++ ++ + + ++
Sbjct: 256 EVPSGDTILMKWILHDWSDQHCATLLKNCYDALPAH---GKVVLVQCILPVNPEANPSSQ 312
Query: 310 AKLLGDTLM-SVSVDGKERTDEEWKTLFLDAGFTHYKITNVFGLKSLIE 357
D +M + + G+ER + E++ L AGFT K T ++ IE
Sbjct: 313 GVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTYIYANAWAIE 361
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 126/257 (49%), Gaps = 17/257 (6%)
Query: 97 EEAYGLTAISALLIKDKSYC-LSPLVSGILDPENIFPLHFISKWFKGNDISVWETVHGKN 155
E YGL+ + L+ D+S L+ + + P + + DI +++ VHG
Sbjct: 111 ERVYGLSXVGKYLVPDESRGYLASFTTFLCYPALLQVWXNFKEAVVDEDIDLFKNVHGVT 170
Query: 156 YWDYMNQNPGLSQRFNQAMI----SDSEMAIFIVKDCCRKIFEXXXXXXXXXXXXXXFSK 211
+++ ++ +Q FN++ + ++ + + I FE +
Sbjct: 171 KYEFXGKDKKXNQIFNKSXVDVCATEXKRXLEIYTG-----FEGISTLVDVGGGSGRNLE 225
Query: 212 IISEAFPGIKCTVLDLPHAVANMPQTENLKYIAGDMFQYIPPADAYFFKLVFHAFGDEDC 271
+I +P IK DLP + N P ++++ GD F +P DA K V H + DE C
Sbjct: 226 LIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDXFASVPQGDAXILKAVCHNWSDEKC 285
Query: 272 LKILKKCREAIAGNGERGKVLIMDIVINEKEDKHQVTEAKLLG--DTLMSVSVDGKERTD 329
++ L C +A++ N GKV+I++ ++ E+ + + E+KL+ D L ++V G+ERT+
Sbjct: 286 IEFLSNCHKALSPN---GKVIIVEFILPEEPNTSE--ESKLVSTLDNLXFITVGGRERTE 340
Query: 330 EEWKTLFLDAGFTHYKI 346
++++ L +GF+ +++
Sbjct: 341 KQYEKLSKLSGFSKFQV 357
>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
Length = 348
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 15/146 (10%)
Query: 218 PGIKCTVLDLPHAVA----NMPQTENL-KYIAGDMFQYIPPADAYFFKLVFHAFGDEDCL 272
PG++ +LD VA + P K + GD + +P AD + K + H +GDED +
Sbjct: 207 PGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRILHNWGDEDSV 266
Query: 273 KILKKCREAIAGNGERGKVLIMDIVINEKEDKHQVTEAKLLGDTLMSVSVDGKERTDEEW 332
+IL CR + G+VL++D V+ E D HQ E D + G+ERT E
Sbjct: 267 RILTNCRRVXPAH---GRVLVIDAVVPEGNDAHQSKEX----DFXXLAARTGQERTAAEL 319
Query: 333 KTLFLDAGFTHYKITNVFGLKSLIEV 358
+ LF AG ++ V G S+ +
Sbjct: 320 EPLFTAAGL---RLDRVVGTSSVXSI 342
>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
Length = 334
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 140/342 (40%), Gaps = 43/342 (12%)
Query: 21 QVIRLVFNHLSAMSLKGAVELGIADIIHSHGRPITLSELVSALKIQPTKTSNLFRFMRLL 80
+I++V + + A LG+AD+I S I E ++A + + R MRLL
Sbjct: 11 NLIQVVTGEWKSRCVYVATRLGLADLIESG---IDSDETLAA--AVGSDAERIHRLMRLL 65
Query: 81 VHMGLFSKTKVGGEKEEEAYGLTAISALLIKDKSYCLSPLVSGILDPENIFPLHFISKWF 140
V +F + Y T S LL +D +V + F + W
Sbjct: 66 VAFEIFQGDT------RDGYANTPTSHLL-RDVEGSFRDMVL-------FYGEEFHAAWT 111
Query: 141 KGNDISV-----WETVHGKNYWDYMNQNPGLSQRFNQAMISDSEMAIFIVKDCCRKIFEX 195
+ + +E G++++ Y+ + P +RF AM + S +A + R +
Sbjct: 112 PACEALLSGTPGFELAFGEDFYSYLKRCPDAGRRFLLAMKA-SNLAFHEIP---RLLDFR 167
Query: 196 XXXXXXXXXXXXXFSKIISEAFPGIKCTVLDLPHAV-------ANMPQTENLKYIAGDMF 248
+K I +A P + +LD ++ +++ E + + GDM
Sbjct: 168 GRSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDML 227
Query: 249 QYIPP-ADAYFFKLVFHAFGDEDCLKILKKCREAIAGNGERGKVLIMDIVINEKEDKHQV 307
Q +P D Y + + L++L CREA+AG+ G+V++++ I+ E
Sbjct: 228 QEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGD---GRVVVIERTISASEP---- 280
Query: 308 TEAKLLGDTLMSVSVDGKERTDEEWKTLFLDAGFTHYKITNV 349
+ +L D + ++ G+ RT EE L GF +I ++
Sbjct: 281 SPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDL 322
>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 136/352 (38%), Gaps = 76/352 (21%)
Query: 22 VIRLVFNHLSAMSLKGAVELGIADIIHSHGRPITLSELVSALKIQPTKTSNLFRFMRLLV 81
+IRL H + M ++ A L + D I + R T+ L + +P L R +R LV
Sbjct: 24 LIRLGSLH-TPMVVRTAATLRLVDHILAGAR--TVKALAARTDTRP---EALLRLIRHLV 77
Query: 82 HMGLFSKTKVGGEKEEEAYG---LTAISALLIKDKSYCLSPLVSGILDPENIFPLHFISK 138
+GL EE+A G T + LL D P H +++
Sbjct: 78 AIGLL---------EEDAPGEFVPTEVGELLADDH-------------PAAQRAWHDLTQ 115
Query: 139 WFKGNDIS-------------VWETVHGKNYWDYMNQNPGLSQRFNQAMISDSEMAIFIV 185
DIS +E+++GK +++ + P L F+ + D ++A
Sbjct: 116 AVARADISFTRLPDAIRTGRPTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAF--- 172
Query: 186 KDCCRKIFE--XXXXXXXXXXXXXXFSKIISEAFPGIKCTVLDLPHAVANMPQ------- 236
D ++ F+ I+ P + TVL++ V
Sbjct: 173 -DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGL 231
Query: 237 TENLKYIAGDMFQYIP-PADAYFFKLVFHAFGDEDCLKILKKCREAIAGNGERGKVLIMD 295
++ + + GD F+ +P ADA V + D D ++IL +C EA+ G
Sbjct: 232 SDRVDVVEGDFFEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGR-------- 283
Query: 296 IVINEKEDKH------QVTEAKLLGDTLMSVSVDGKERTDEEWKTLFLDAGF 341
I+I+E++D H Q TE D M V + G RT E+W L AG
Sbjct: 284 ILIHERDDLHENSFNEQFTEL----DLRMLVFLGGALRTREKWDGLAASAGL 331
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 139/319 (43%), Gaps = 31/319 (9%)
Query: 32 AMSLKGAVELGIADIIHSHGRPIT-LSELVSALKIQPTKTSNLFRFMRLLVHMGLFSKTK 90
A ++ AVELG+ +++ R T L+E A + L R +RLL +G+F
Sbjct: 52 ARAIHVAVELGVPELLQEGPRTATALAEATGAHE------QTLRRLLRLLATVGVFDDLG 105
Query: 91 VGGEKEEEAYGLTAISALLIKDKSYCLSPLVSGILDPENIFPLHFISKWFKGNDISVWET 150
++ + A+SA+L+ D + ++ P + ++ + + S ++
Sbjct: 106 -----HDDLFAQNALSAVLLPDPASPVATDARFQAAPWHWRAWEQLTHSVRTGEAS-FDV 159
Query: 151 VHGKNYWDYMNQNPGLSQRFNQAMISDSEMAIFIVKDCCRKIFEXXXXXXXXXXXXXXFS 210
+G ++W +++P + FN+A S S V F
Sbjct: 160 ANGTSFWQLTHEDPKARELFNRAXGSVSLTEAGQV--AAAYDFSGAATAVDIGGGRGSLX 217
Query: 211 KIISEAFPGIKCTVLDLPHAVANMPQ-------TENLKYIAGDMFQYIPP-ADAYFFKLV 262
+ +AFPG++ T+L+ P + + + + GD F+ IP AD Y K V
Sbjct: 218 AAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVYLIKHV 277
Query: 263 FHAFGDEDCLKILKKCREAIAGNGERGKVLIMDIVINEKEDKHQVTEAKLLGDTLMSVSV 322
H + D+D ++IL++ A + ++L++D +I+E+ + L D L+ V V
Sbjct: 278 LHDWDDDDVVRILRRIATAXKPD---SRLLVIDNLIDERP-----AASTLFVDLLLLVLV 329
Query: 323 DGKERTDEEWKTLFLDAGF 341
G ER++ E+ L +G
Sbjct: 330 GGAERSESEFAALLEKSGL 348
>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam
pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam And
N-Acetylserotonin
Length = 353
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Query: 217 FPGIKCTVLDLPHAVANMPQ------TENLKYIAGDMFQ-YIPPADAYFFKLVFHAFGDE 269
+PG K TV D+P V Q E + + GD F+ +P AD Y V H + D
Sbjct: 201 YPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHDWADG 260
Query: 270 DCLKILKKCREAIAGNGERGKVLIMDIVINEKEDKHQVTEAKLLGDTLMSVSVDGKERTD 329
C +L++ G +L+++ +++E +T+ L M V +G+ERT
Sbjct: 261 KCSHLLERIYHTCKPG---GGILVIESLLDEDRRGPLLTQLYSLN---MLVQTEGQERTP 314
Query: 330 EEWKTLFLDAGFTHYKI 346
+ L AGF ++
Sbjct: 315 THYHMLLSSAGFRDFQF 331
>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
Length = 332
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 123/333 (36%), Gaps = 41/333 (12%)
Query: 23 IRLVFNHLSAMSLKGAVELGIADIIHSHGRPITLSELVSALKIQPTKTSNLFRFMRLLVH 82
+R + + + M+++ A L +AD I + R +L R +R LV
Sbjct: 10 LRALADLATPMAVRVAATLRVADHIAAGHRTAAEIA-----SAAGAHADSLDRLLRHLVA 64
Query: 83 MGLFSKTKVGGEKEEEAYGLTAISALLIKDKSYCLSPLVS-----GILDPENIFPLHFIS 137
+GLF++ G YGLT L D + + G D + H I
Sbjct: 65 VGLFTRDGQG------VYGLTEFGEQLRDDHAAGKRKWLDMNSAVGRGDLGFVELAHSIR 118
Query: 138 KWFKGNDISVWETVHGKNYWDYMNQNPGLSQRFNQAMISDSEMAIFIVKDCCRKIFEXXX 197
+ +G ++W+ + +P LS F+ M E+ + + +
Sbjct: 119 -----TGQPAYPVRYGTSFWEDLGSDPVLSASFDTLMSHHLELDYTGI--AAKYDWAALG 171
Query: 198 XXXXXXXXXXXFSKIISEAFPGIKCTVLDL--PHAVA-----NMPQTENLKYIAGDMFQY 250
+ A + TVLDL P + A + + + + G F
Sbjct: 172 HVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDP 231
Query: 251 IPP-ADAYFFKLVFHAFGDEDCLKILKKCREAIAGNGERGKVLIMDIVINEKEDKHQVTE 309
+P A Y V H + D + IL++C EA AG+G G VL+++ V D+H T
Sbjct: 232 LPAGAGGYVLSAVLHDWDDLSAVAILRRCAEA-AGSG--GVVLVIEAVAG---DEHAGTG 285
Query: 310 AKLLGDTLMSVSVDGKERTDEEWKTLFLDAGFT 342
D M GKER+ E L AG
Sbjct: 286 M----DLRMLTYFGGKERSLAELGELAAQAGLA 314
>pdb|2R3S|A Chain A, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
pdb|2R3S|B Chain B, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
Length = 335
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 243 IAGDMFQ--YIPPADAYFFKLVFHAFGDEDCLKILKKCREAIAGNGERGKVLIMDIVINE 300
IAG F+ Y D H F C ++L+K + A+A GKV++ D + N
Sbjct: 220 IAGSAFEVDYGNDYDLVLLPNFLHHFDVATCEQLLRKIKTALA---VEGKVIVFDFIPNS 276
Query: 301 KEDKHQVTEAKLLGDTLMSVSVDGKERTDEEWKTLFLDAGFTHYKI 346
D+ +A ++ + +G T E+++ F +AGF+H ++
Sbjct: 277 --DRITPPDAAAFSLVXLATTPNGDAYTFAEYESXFSNAGFSHSQL 320
>pdb|1X19|A Chain A, Crystal Structure Of Bchu Involved In Bacteriochlorophyll
C Biosynthesis
pdb|1X1A|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Methionine
pdb|1X1B|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine
pdb|1X1C|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn2+
pdb|1X1D|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn-Bacteriopheophorbide D
Length = 359
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Query: 217 FPGIKCTVLDLPHAV-------ANMPQTENLKYIAGDMF-QYIPPADAYFFKLVFHAFGD 268
FP + T+L+LP A+ A + ++ IA D++ + P ADA F + ++ +
Sbjct: 212 FPELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRILYS-AN 270
Query: 269 EDCLKILKKCREAIAGNGERGKVLIMDIVINEKEDKH 305
E I+ C++A G++LI+D+VI++ E+ +
Sbjct: 271 EQLSTIM--CKKAFDAMRSGGRLLILDMVIDDPENPN 305
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 268 DEDCLKILKK--------CREAIAGNGERGKVLIMDIVINEKEDKHQVTEAKLLGDT 316
D D LK+L K RE G K+L +++I + E H VTE+++L +T
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 268 DEDCLKILKK--------CREAIAGNGERGKVLIMDIVINEKEDKHQVTEAKLLGDT 316
D D LK+L K RE G K+L +++I + E H VTE+++L +T
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 65
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 268 DEDCLKILKK--------CREAIAGNGERGKVLIMDIVINEKEDKHQVTEAKLLGDT 316
D D LK+L K RE G K+L +++I + E H VTE+++L +T
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 268 DEDCLKILKK--------CREAIAGNGERGKVLIMDIVINEKEDKHQVTEAKLLGDT 316
D D LK+L K RE G K+L +++I + E H VTE+++L +T
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 268 DEDCLKILKK--------CREAIAGNGERGKVLIMDIVINEKEDKHQVTEAKLLGDT 316
D D LK+L K RE G K+L +++I + E H VTE+++L +T
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 268 DEDCLKILKK--------CREAIAGNGERGKVLIMDIVINEKEDKHQVTEAKLLGDT 316
D D LK+L K RE G K+L +++I + E H VTE+++L +T
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 67
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 268 DEDCLKILKK--------CREAIAGNGERGKVLIMDIVINEKEDKHQVTEAKLLGDT 316
D D LK+L K RE G K+L +++I + E H VTE+++L +T
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,250,000
Number of Sequences: 62578
Number of extensions: 406304
Number of successful extensions: 991
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 946
Number of HSP's gapped (non-prelim): 27
length of query: 360
length of database: 14,973,337
effective HSP length: 100
effective length of query: 260
effective length of database: 8,715,537
effective search space: 2266039620
effective search space used: 2266039620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)