Query 018120
Match_columns 360
No_of_seqs 216 out of 1981
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 10:15:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018120.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018120hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e3a_A Sugar kinase protein; s 100.0 6.7E-54 2.3E-58 399.8 36.7 323 11-346 21-348 (352)
2 3uq6_A Adenosine kinase, putat 100.0 3.4E-53 1.2E-57 398.0 27.9 315 12-337 23-361 (372)
3 3otx_A Adenosine kinase, putat 100.0 4.9E-51 1.7E-55 380.3 32.6 314 13-337 5-340 (347)
4 3vas_A Putative adenosine kina 100.0 6.2E-51 2.1E-55 382.3 30.7 315 12-337 21-359 (370)
5 3loo_A Anopheles gambiae adeno 100.0 1.1E-50 3.9E-55 380.0 29.3 314 12-336 20-355 (365)
6 3go6_A Ribokinase RBSK; phosph 100.0 5.2E-47 1.8E-51 347.3 29.2 287 11-351 15-305 (310)
7 3ljs_A Fructokinase; fructokia 100.0 2.6E-47 9E-52 353.8 27.1 302 14-351 3-329 (338)
8 2rbc_A Sugar kinase, AGR_C_456 100.0 2.8E-46 9.6E-51 347.1 32.6 296 14-351 28-329 (343)
9 1bx4_A Protein (adenosine kina 100.0 3E-46 1E-50 347.7 32.7 311 14-336 5-338 (345)
10 3h49_A Ribokinase; transferase 100.0 1.9E-46 6.5E-51 346.1 30.9 304 13-352 3-316 (325)
11 3ry7_A Ribokinase; transferase 100.0 5.9E-47 2E-51 346.4 26.0 294 16-346 3-303 (304)
12 3iq0_A Putative ribokinase II; 100.0 4.7E-46 1.6E-50 344.3 32.3 308 15-359 3-321 (330)
13 3ikh_A Carbohydrate kinase; tr 100.0 4E-47 1.4E-51 346.6 23.8 286 16-354 3-292 (299)
14 1rkd_A Ribokinase; carbohydrat 100.0 3.8E-46 1.3E-50 341.8 29.0 299 15-351 4-308 (309)
15 2c4e_A Sugar kinase MJ0406; tr 100.0 3.2E-46 1.1E-50 341.2 28.3 294 16-352 6-301 (302)
16 3kzh_A Probable sugar kinase; 100.0 2.9E-46 9.8E-51 345.4 25.8 302 13-353 4-312 (328)
17 2abs_A Adenosine kinase, AK; r 100.0 1.9E-45 6.4E-50 346.9 31.9 315 9-336 26-376 (383)
18 4du5_A PFKB; structural genomi 100.0 1.8E-45 6.3E-50 341.0 31.0 295 13-346 24-333 (336)
19 3hj6_A Fructokinase, FRK; fruc 100.0 5.7E-47 2E-51 349.9 19.4 301 10-349 16-326 (327)
20 3pl2_A Sugar kinase, ribokinas 100.0 1.5E-45 5.2E-50 339.3 28.6 299 13-350 6-317 (319)
21 3ktn_A Carbohydrate kinase, PF 100.0 3.4E-45 1.2E-49 340.7 31.1 301 16-353 3-334 (346)
22 2qcv_A Putative 5-dehydro-2-de 100.0 1.4E-44 4.9E-49 334.6 32.0 305 13-352 9-327 (332)
23 2nwh_A AGR_C_3442P, carbohydra 100.0 1.2E-44 4.1E-49 332.9 30.3 296 15-348 3-305 (317)
24 1vm7_A Ribokinase; TM0960, str 100.0 1.9E-44 6.3E-49 330.7 30.1 290 16-349 15-309 (311)
25 1v1a_A 2-keto-3-deoxygluconate 100.0 1.2E-44 4.1E-49 331.8 28.0 291 17-351 3-304 (309)
26 3ie7_A LIN2199 protein; phosph 100.0 2.1E-44 7.2E-49 331.8 28.1 294 18-356 4-309 (320)
27 3b1n_A Ribokinase, putative; r 100.0 7.5E-44 2.6E-48 328.7 30.2 303 17-351 2-306 (326)
28 2fv7_A Ribokinase; structural 100.0 6E-45 2.1E-49 336.9 22.9 295 14-345 23-327 (331)
29 1tyy_A Putative sugar kinase; 100.0 1.1E-44 3.8E-49 336.1 23.3 295 13-354 22-333 (339)
30 4e69_A 2-dehydro-3-deoxyglucon 100.0 1.2E-43 4.2E-48 327.6 29.7 283 13-339 21-320 (328)
31 3umo_A 6-phosphofructokinase i 100.0 2.3E-43 8E-48 323.3 31.1 291 16-350 2-306 (309)
32 2v78_A Fructokinase; transfera 100.0 1E-43 3.5E-48 326.2 28.4 291 17-350 3-310 (313)
33 2dcn_A Hypothetical fructokina 100.0 1.2E-43 4E-48 325.5 27.8 294 16-350 2-308 (311)
34 3ewm_A Uncharacterized sugar k 100.0 9E-44 3.1E-48 326.6 26.5 287 16-351 2-301 (313)
35 3lhx_A Ketodeoxygluconokinase; 100.0 2.9E-43 9.9E-48 324.0 27.8 277 16-337 5-305 (319)
36 2pkf_A Adenosine kinase; trans 100.0 3.1E-43 1E-47 325.8 27.6 306 16-351 11-320 (334)
37 2hlz_A Ketohexokinase; non-pro 100.0 1.2E-42 4E-47 318.9 29.0 282 12-335 14-309 (312)
38 3cqd_A 6-phosphofructokinase i 100.0 2.8E-42 9.6E-47 316.1 29.9 288 17-350 3-306 (309)
39 3bf5_A Ribokinase related prot 100.0 1.5E-43 5.3E-48 323.7 21.2 285 9-351 14-301 (306)
40 2jg1_A Tagatose-6-phosphate ki 100.0 3.4E-42 1.2E-46 318.2 27.5 288 17-349 22-323 (330)
41 2f02_A Tagatose-6-phosphate ki 100.0 5.4E-42 1.9E-46 316.1 28.5 290 17-351 4-308 (323)
42 2ajr_A Sugar kinase, PFKB fami 100.0 1.1E-42 3.9E-47 321.6 22.7 295 14-350 11-324 (331)
43 4gm6_A PFKB family carbohydrat 100.0 1.5E-41 5.2E-46 316.7 28.8 303 14-352 23-346 (351)
44 4e84_A D-beta-D-heptose 7-phos 100.0 1.5E-42 5.1E-47 323.0 21.8 295 10-345 48-351 (352)
45 2abq_A Fructose 1-phosphate ki 100.0 6.9E-41 2.4E-45 306.4 29.9 287 19-354 4-301 (306)
46 2afb_A 2-keto-3-deoxygluconate 100.0 9.4E-41 3.2E-45 311.3 29.0 272 73-350 38-343 (351)
47 3kd6_A Carbohydrate kinase, PF 100.0 1.7E-40 5.8E-45 304.7 29.9 283 16-349 3-296 (313)
48 2jg5_A Fructose 1-phosphate ki 100.0 1.8E-40 6.2E-45 303.6 28.4 284 18-350 3-297 (306)
49 2qhp_A Fructokinase; NP_810670 100.0 6.4E-41 2.2E-45 305.2 24.6 257 76-339 21-288 (296)
50 1vk4_A PFKB carbohydrate kinas 100.0 7E-39 2.4E-43 291.9 15.9 275 13-344 9-292 (298)
51 2yxt_A Pyridoxal kinase; beta 99.9 4.1E-24 1.4E-28 195.5 11.4 212 96-331 12-269 (312)
52 2ddm_A Pyridoxine kinase; pyri 99.9 1E-22 3.5E-27 183.7 13.9 219 93-332 19-267 (283)
53 1jxh_A Phosphomethylpyrimidine 99.9 8.7E-22 3E-26 178.0 10.9 159 170-332 94-269 (288)
54 1ub0_A THID, phosphomethylpyri 99.8 1.6E-19 5.5E-24 160.5 17.1 159 170-332 70-244 (258)
55 2i5b_A Phosphomethylpyrimidine 99.8 8.6E-19 2.9E-23 156.9 16.1 159 170-332 74-250 (271)
56 3h74_A Pyridoxal kinase; PSI-I 99.8 1.9E-17 6.5E-22 148.6 16.1 157 170-331 74-248 (282)
57 3mbh_A Putative phosphomethylp 99.7 1.5E-17 5.1E-22 150.1 14.1 158 170-331 77-258 (291)
58 3pzs_A PM kinase, pyridoxamine 99.7 7.2E-18 2.5E-22 152.2 11.7 161 169-332 76-260 (289)
59 3zs7_A Pyridoxal kinase; trans 99.7 1.8E-16 6E-21 143.5 15.3 157 169-331 75-261 (300)
60 1ekq_A Hydroxyethylthiazole ki 99.6 3.1E-15 1.1E-19 133.5 13.9 162 166-330 54-234 (272)
61 3rm5_A Hydroxymethylpyrimidine 99.5 3.3E-13 1.1E-17 131.8 14.9 155 170-329 91-273 (550)
62 1v8a_A Hydroxyethylthiazole ki 99.3 5.2E-12 1.8E-16 111.9 11.8 158 166-328 52-224 (265)
63 3dzv_A 4-methyl-5-(beta-hydrox 99.1 1.9E-09 6.5E-14 95.1 17.0 156 166-325 54-230 (273)
64 3rss_A Putative uncharacterize 99.0 4E-09 1.4E-13 101.2 15.6 155 166-329 316-474 (502)
65 2r3b_A YJEF-related protein; p 99.0 2.1E-09 7.2E-14 97.0 12.3 150 168-329 109-266 (310)
66 3rpz_A ADP/ATP-dependent NAD(P 99.0 2E-09 7E-14 95.5 11.6 155 167-333 95-258 (279)
67 3bgk_A SMU.573, putative uncha 99.0 7.1E-09 2.4E-13 93.6 13.0 152 168-330 123-284 (311)
68 3hpd_A Hydroxyethylthiazole ki 98.7 3.3E-07 1.1E-11 80.2 13.9 154 166-323 52-219 (265)
69 3drw_A ADP-specific phosphofru 98.7 2E-06 6.9E-11 80.8 19.8 161 74-242 112-319 (474)
70 3nl6_A Thiamine biosynthetic b 98.6 2E-06 6.9E-11 83.1 16.7 158 166-324 301-495 (540)
71 1ua4_A Glucokinase, ADP-depend 98.3 6.1E-05 2.1E-09 70.9 20.4 157 76-241 108-301 (455)
72 1l2l_A ADP-dependent glucokina 98.2 3.1E-05 1.1E-09 72.7 14.1 154 77-239 112-302 (457)
73 1gc5_A ADP-dependent glucokina 98.2 3.2E-05 1.1E-09 72.8 14.1 155 77-240 117-313 (467)
74 3k5w_A Carbohydrate kinase; 11 97.9 0.00012 4E-09 69.6 12.8 146 168-328 290-445 (475)
75 4h3d_A 3-dehydroquinate dehydr 65.3 60 0.002 27.6 10.6 93 170-272 113-215 (258)
76 3tsm_A IGPS, indole-3-glycerol 65.0 67 0.0023 27.6 11.3 60 166-233 138-197 (272)
77 4a29_A Engineered retro-aldol 60.8 64 0.0022 27.5 9.6 64 165-236 121-184 (258)
78 3tz6_A Aspartate-semialdehyde 57.3 30 0.001 30.9 7.5 91 96-207 3-96 (344)
79 2fcj_A Small toprim domain pro 55.2 15 0.00052 27.3 4.3 78 170-257 26-103 (119)
80 3o1n_A 3-dehydroquinate dehydr 48.5 1.3E+02 0.0045 25.8 10.5 91 171-272 134-235 (276)
81 1y81_A Conserved hypothetical 45.9 93 0.0032 23.4 11.9 81 100-205 17-102 (138)
82 3q58_A N-acetylmannosamine-6-p 43.1 1.4E+02 0.0048 24.7 10.0 58 167-232 98-156 (229)
83 1i4n_A Indole-3-glycerol phosp 41.0 72 0.0025 27.1 6.9 64 166-236 119-182 (251)
84 3pwk_A Aspartate-semialdehyde 40.1 1.9E+02 0.0065 25.9 10.0 92 96-207 4-97 (366)
85 3qja_A IGPS, indole-3-glycerol 39.3 66 0.0023 27.6 6.6 62 163-232 128-189 (272)
86 3igs_A N-acetylmannosamine-6-p 38.9 1.7E+02 0.0057 24.3 9.7 57 168-232 99-156 (232)
87 3can_A Pyruvate-formate lyase- 38.6 1.4E+02 0.0047 23.2 9.5 65 172-242 5-76 (182)
88 1pii_A N-(5'phosphoribosyl)ant 34.3 88 0.003 29.1 6.9 64 165-236 125-188 (452)
89 3pzr_A Aspartate-semialdehyde 33.9 78 0.0027 28.6 6.4 38 166-206 60-98 (370)
90 2fq6_A Cystathionine beta-lyas 33.3 96 0.0033 28.2 7.1 36 170-205 167-207 (415)
91 3fdb_A Beta C-S lyase, putativ 32.0 2.5E+02 0.0085 24.3 9.6 36 170-205 150-191 (377)
92 1y8q_A Ubiquitin-like 1 activa 31.8 2.7E+02 0.0092 24.6 10.0 97 74-202 40-155 (346)
93 1ztd_A Hypothetical protein PF 29.9 60 0.0021 23.5 3.8 42 290-331 63-105 (133)
94 3uw3_A Aspartate-semialdehyde 28.2 2.1E+02 0.0072 25.8 8.2 92 95-206 5-102 (377)
95 3ndn_A O-succinylhomoserine su 26.8 1.2E+02 0.004 27.6 6.5 36 170-205 166-204 (414)
96 3hsk_A Aspartate-semialdehyde 26.3 2.8E+02 0.0095 25.0 8.7 37 167-207 90-126 (381)
97 1iuk_A Hypothetical protein TT 26.2 2.1E+02 0.007 21.4 9.9 107 96-232 15-124 (140)
98 3qhx_A Cystathionine gamma-syn 26.0 1.1E+02 0.0038 27.3 6.2 20 186-205 170-189 (392)
99 2d59_A Hypothetical protein PH 24.6 2.2E+02 0.0076 21.3 12.3 108 95-232 23-131 (144)
100 2p0y_A Hypothetical protein LP 24.5 65 0.0022 28.7 4.0 33 74-107 13-46 (341)
101 3rht_A (gatase1)-like protein; 24.5 2.9E+02 0.0099 23.3 8.0 75 96-202 6-85 (259)
102 1t4b_A Aspartate-semialdehyde 23.8 3.9E+02 0.013 23.8 10.0 38 167-207 62-100 (367)
103 4fgs_A Probable dehydrogenase 22.7 1.7E+02 0.0058 25.0 6.3 60 169-233 52-111 (273)
104 1ryi_A Glycine oxidase; flavop 22.7 68 0.0023 28.4 3.9 24 78-102 25-48 (382)
105 4fn4_A Short chain dehydrogena 22.4 3E+02 0.01 23.0 7.8 60 169-233 30-92 (254)
106 3f8d_A Thioredoxin reductase ( 21.6 1.3E+02 0.0044 25.5 5.5 47 78-125 23-89 (323)
107 3ri6_A O-acetylhomoserine sulf 21.1 1.3E+02 0.0045 27.5 5.6 36 170-205 167-205 (430)
108 2duw_A Putative COA-binding pr 21.0 2.7E+02 0.0092 20.9 9.6 54 170-232 70-124 (145)
109 3iwt_A 178AA long hypothetical 20.3 1E+02 0.0035 24.2 4.2 36 95-131 16-64 (178)
No 1
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=100.00 E-value=6.7e-54 Score=399.78 Aligned_cols=323 Identities=31% Similarity=0.453 Sum_probs=289.3
Q ss_pred cccCCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHH
Q 018120 11 EASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLS 90 (360)
Q Consensus 11 ~~~~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la 90 (360)
+.++.++|+|+| ++++|+++++++.+++++++++|.+++++.+....++.... +....+||++.|+|++|+
T Consensus 21 ~~m~~~~v~~iG-~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~--------~~~~~~GG~~~N~A~~la 91 (352)
T 4e3a_A 21 QSMTRFDVLTVG-NAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMG--------PALEASGGSAGNTAAGVA 91 (352)
T ss_dssp --CCSEEEEEEC-CCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSC--------SCEEEECCHHHHHHHHHH
T ss_pred hHCCcccEEEEC-CceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhh--------hccEecCCHHHHHHHHHH
Confidence 345679999999 99999999999999999999999999999999999998865 367899999999999999
Q ss_pred hhcCCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeecccccccCCCcccCCccccC
Q 018120 91 VGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVK 169 (360)
Q Consensus 91 ~~lG~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 169 (360)
+ ||.++.++|.||+|.+|+.+++.|++.||+++++...++ +|+.++++++++|+|++..+.+++..+++++++.+.++
T Consensus 92 ~-LG~~~~~ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~~~~~~~~~~ 170 (352)
T 4e3a_A 92 N-LGGKAAYFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEADVVA 170 (352)
T ss_dssp H-HTCCEEEECCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEECGGGGGCCGGGCCHHHHH
T ss_pred H-cCCCeEEEEEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEeccChhhcCChhhCCHHHHh
Confidence 9 999999999999999999999999999999999987655 89999999999999999888888889999999888899
Q ss_pred CCcEEEEe-ecc---cCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCC
Q 018120 170 GSKWLVLR-FGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEEN 245 (360)
Q Consensus 170 ~~~~v~~~-~~~---~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~ 245 (360)
+++++|++ +.. .+.+.+.++++.++++|.++++|++++.....+++.+.++++..++|++++|++|+..|++.
T Consensus 171 ~~~~v~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g~--- 247 (352)
T 4e3a_A 171 DAKVTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQT--- 247 (352)
T ss_dssp TEEEEEEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTTC---
T ss_pred hCCEEEEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhCC---
Confidence 99999998 322 23578899999999999999999998877777788888888622699999999999999985
Q ss_pred CcHHHHHHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHHHHh
Q 018120 246 ADSEAALEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVGSCSG 325 (360)
Q Consensus 246 ~~~~~~~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~~aa 325 (360)
++.+++.+.+.++++.|+||+|++|++++++++.+++|+++..+++|||||||+|+|||++++++|+++++|+++|+++|
T Consensus 248 ~~~~~a~~~l~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agfl~~l~~g~~l~~a~~~A~~aA 327 (352)
T 4e3a_A 248 DDFEEALNRIAADCKIAAVTMSENGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGYTQGRSLEDCGKLGCLAA 327 (352)
T ss_dssp SCHHHHHHHHHHHSSEEEEECGGGCEEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCEEEEEECCCceEEEECCEEEEECCccCCCCcCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 36777777777789999999999999999999999999996445899999999999999999999999999999999999
Q ss_pred cchhcccCCccCcccHHHHHH
Q 018120 326 GSVIRSLGGEVTPENWQWMRK 346 (360)
Q Consensus 326 a~~v~~~G~~~~~~~~~~~~~ 346 (360)
+.+|++.|++...+..+.+++
T Consensus 328 a~~v~~~G~~~~~~~~~~~~~ 348 (352)
T 4e3a_A 328 GIVIQQIGPRPMTSLSEAAKQ 348 (352)
T ss_dssp HHHTTSSSSSCSSCHHHHHHH
T ss_pred HHHHcCCCCCCCcCHHHHHHH
Confidence 999999999988777665543
No 2
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=100.00 E-value=3.4e-53 Score=398.01 Aligned_cols=315 Identities=18% Similarity=0.258 Sum_probs=268.9
Q ss_pred ccCCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHh
Q 018120 12 ASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSV 91 (360)
Q Consensus 12 ~~~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~ 91 (360)
..++..|+||| |++||++++++++||+++++++|.|++++. +...++.+.... .+.++.+||+++|+|+++++
T Consensus 23 ~~~~~~v~giG-nalvDi~~~v~d~~l~~~~l~kg~m~l~~~-~~~~~~~~~~~~-----~~~~~~~GGsa~N~a~~la~ 95 (372)
T 3uq6_A 23 DLSEGYVFGMG-NPLLDIIVDADDFMYRKYNLKKDNIVLAEE-KHMTIYDEIQKK-----KKLNYIAGGATLNTVKMIQW 95 (372)
T ss_dssp CCCTTCEEEEE-CCEEEEEEECCTHHHHHTTCCTTEEEECCG-GGTTHHHHHHTS-----SSCEEEECCHHHHHHHHHHH
T ss_pred CCCCCeEEEEC-CceeeEEEEeCHHHHHHcCCCCCceEEcCH-HHHHHHHHHhcc-----CCeEEeCCcHHHHHHHHHHH
Confidence 34566799999 999999999999999999999999999884 444455544432 25788999999999999999
Q ss_pred hcCCc---eEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeecccccccCCCcccCCc--
Q 018120 92 GFGVP---CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA-- 165 (360)
Q Consensus 92 ~lG~~---v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~-- 165 (360)
||.+ +.|+|.||+|.+|+.+++.|++.||+++++...+. +|+.|+++++ +++|+++.+++++..+++++++.
T Consensus 96 -LG~~~~~~~fiG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~~ga~~~l~~~~i~~~~ 173 (372)
T 3uq6_A 96 -IIQKPFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTYLGAACDLSLAHIEQPH 173 (372)
T ss_dssp -HHCSTTSEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEEEEGGGGCCHHHHTSHH
T ss_pred -cCCCCCcEEEEeeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC-CCceEEEEeccchhhcchhhhhhhh
Confidence 9865 89999999999999999999999999999887666 6888888876 89999999999999999888864
Q ss_pred --cccCCCcEEEEe-ecc-cCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhc
Q 018120 166 --EDVKGSKWLVLR-FGM-FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241 (360)
Q Consensus 166 --~~~~~~~~v~~~-~~~-~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~ 241 (360)
+.++++++++++ +.. .+++.+.++++.+++++.++++|++.++..+.+++.+.++++ ++|++++|++|+..|++
T Consensus 174 ~~~~i~~a~~~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~~l~~ll~--~~Dil~~Ne~Ea~~l~~ 251 (372)
T 3uq6_A 174 VWSLVEKAQVYYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMIS--YSNIVFGNESEAEAYGE 251 (372)
T ss_dssp HHHHHHHCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHT--TCSEEEEEHHHHHHHHH
T ss_pred HHHHhhcccEEEEecccccccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHHHHHHHhh--cCCcccCCHHHHHHHhC
Confidence 457889999999 321 235788899999999999999999999888889999999998 89999999999999987
Q ss_pred CCC--CCcHHHHHHHHH--------cCCCEEEEEeCCCceEEEECCE----EEEeCCcCCCcccCCCCccHHhHHHHHHH
Q 018120 242 GEE--NADSEAALEFLA--------KRCQWAVVTLGPNGCIAKHGKE----IVKVPAIGEAKAIDATGAGDLFASGFLYG 307 (360)
Q Consensus 242 ~~~--~~~~~~~~~~l~--------~~~~~vivt~G~~G~~~~~~~~----~~~~~~~~~~~vvdttGAGD~f~ag~~~~ 307 (360)
... .++.+++.+.+. .+.+.+|||+|++|++++++++ .+.+++.+..++||||||||+|+|||+++
T Consensus 252 ~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~ 331 (372)
T 3uq6_A 252 VHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIAD 331 (372)
T ss_dssp HTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHH
T ss_pred CCCCchhHHHHHHHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHH
Confidence 542 345555555543 2567899999999999998663 45666766678999999999999999999
Q ss_pred HHcCCCHHHHHHHHHHHhcchhcccCCccC
Q 018120 308 LVKGLSLEECCKVGSCSGGSVIRSLGGEVT 337 (360)
Q Consensus 308 l~~~~~l~~a~~~a~~aaa~~v~~~G~~~~ 337 (360)
|++|+++++|+++|+++|+.+|++.|++.+
T Consensus 332 l~~g~~l~~a~~~a~~aAa~vv~~~Ga~lp 361 (372)
T 3uq6_A 332 YIRGKPMITSLHAAVKAAAYIICRSGFSLG 361 (372)
T ss_dssp HTTTCCHHHHHHHHHHHHHHHHTSSSSCCC
T ss_pred HHcCCCHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999999999999998754
No 3
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=100.00 E-value=4.9e-51 Score=380.26 Aligned_cols=314 Identities=21% Similarity=0.296 Sum_probs=267.8
Q ss_pred cCCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhh
Q 018120 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (360)
Q Consensus 13 ~~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~ 92 (360)
+++.+|+++| ++++|++++++++|+++|++++|.+++++. +...+..+.. +.......+||++.|+|++|++
T Consensus 5 ~~~~~v~~iG-~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~-~~~p~~~~~~-----~~~~~~~~~GG~~~N~a~~la~- 76 (347)
T 3otx_A 5 SAPLRVYVQC-NPLLDVSAHVSDEFLVKYGLERGTAILLSE-RQKGIFDDIE-----KMPNVRYVPGGSGLNVARVAQW- 76 (347)
T ss_dssp -CCCCEEEEC-CCEEEEEEECCHHHHHHTTCCTTCEEECCG-GGTTHHHHHH-----TSTTCEEEECCHHHHHHHHHHH-
T ss_pred cCCCcEEEEC-CceeeEEEecCHHHHHHcCCCCCceEEcCH-HHHHHHHHHh-----ccCCeEEecCCHHHHHHHHHHH-
Confidence 3567899999 999999999999999999999999999883 2222222221 1125789999999999999999
Q ss_pred c----CCc-eEEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeecccccccCCCcccCCc--
Q 018120 93 F----GVP-CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA-- 165 (360)
Q Consensus 93 l----G~~-v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~-- 165 (360)
| |.+ +.++|.||+|.+|+.+++.|++.||+++++...+.+|+.|+++++ +|+|+++.+.+++..+++++++.
T Consensus 77 L~~~~G~~~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~T~~~~i~~~-~g~r~~~~~~ga~~~~~~~~~~~~~ 155 (347)
T 3otx_A 77 MQQAYKGKFVTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCIT-GKERTLVADLGAANHLSSEHMRSPA 155 (347)
T ss_dssp TTGGGTTSSEEEECEECSSHHHHHHHHHHHHHTCEECCEECSSSCEEEEEEEEE-TTEEEEEEEEEGGGGCCHHHHTSHH
T ss_pred hcccCCCCeEEEEEEecCChHHHHHHHHHHHCCCceecccCCCCCCeEEEEEEE-CCceeeeechhhhhcCCHHHcCchh
Confidence 9 999 999999999999999999999999999998755558999999998 89999988888888888888764
Q ss_pred --cccCCCcEEEEe-e-cccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhc
Q 018120 166 --EDVKGSKWLVLR-F-GMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241 (360)
Q Consensus 166 --~~~~~~~~v~~~-~-~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~ 241 (360)
+.+++++++|++ + ..++++.+.++++.++++|+++++|++.+...+.+++.+.++++ ++|++++|++|+..|++
T Consensus 156 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~--~~dil~~N~~Ea~~l~~ 233 (347)
T 3otx_A 156 VVRAMDESRIFYFSGFTLTVDVNHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLP--YTDIIVANRHEAKEFAN 233 (347)
T ss_dssp HHHHHHHCSEEEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHGG--GCSEEEEEHHHHHHHHH
T ss_pred hHHHHhhCCEEEEeeeecccCHHHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHHh--hCCEEecCHHHHHHHhc
Confidence 567899999998 2 23578999999999999999999999987766677888999999 89999999999999987
Q ss_pred CC--CCCcHHHHHHHHH-------cCCCEEEEEeCCCceEEEECCEEEEeCCcCC--CcccCCCCccHHhHHHHHHHHHc
Q 018120 242 GE--ENADSEAALEFLA-------KRCQWAVVTLGPNGCIAKHGKEIVKVPAIGE--AKAIDATGAGDLFASGFLYGLVK 310 (360)
Q Consensus 242 ~~--~~~~~~~~~~~l~-------~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~--~~vvdttGAGD~f~ag~~~~l~~ 310 (360)
.. +.++.+++.+.+. .+++.|+||+|++|++++++++.+++|+++. .+++|||||||+|+|||+++|++
T Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~ 313 (347)
T 3otx_A 234 MMKWDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAV 313 (347)
T ss_dssp HHTCCCCCHHHHHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTT
T ss_pred ccCCCcCCHHHHHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHHHHc
Confidence 42 2356666666554 5789999999999999999999999988742 28899999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcchhcccCCccC
Q 018120 311 GLSLEECCKVGSCSGGSVIRSLGGEVT 337 (360)
Q Consensus 311 ~~~l~~a~~~a~~aaa~~v~~~G~~~~ 337 (360)
|+++++|+++|+++|+.+|++.|+...
T Consensus 314 g~~l~~a~~~a~~~aa~~v~~~G~~~p 340 (347)
T 3otx_A 314 GKDLRRCCETGHYTAQEVIQRDGCSFP 340 (347)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCC----C
T ss_pred CCCHHHHHHHHHHHHHHHHcccCCCCC
Confidence 999999999999999999999997643
No 4
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=100.00 E-value=6.2e-51 Score=382.27 Aligned_cols=315 Identities=17% Similarity=0.223 Sum_probs=272.2
Q ss_pred ccCCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHh
Q 018120 12 ASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSV 91 (360)
Q Consensus 12 ~~~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~ 91 (360)
.++.++|+++| ++++|++++++++||+++++++|.+++++.+..+..-.... .......+||++.|+|++|++
T Consensus 21 ~m~~~~v~~iG-~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~------~~~~~~~~GG~~~N~A~~la~ 93 (370)
T 3vas_A 21 DLSEGYVFGMG-NPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQK------KKKLNYIAGGATLNTVKMIQW 93 (370)
T ss_dssp CCCTTCEEEEE-CCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTT------SSSCEEEEECHHHHHHHHHHH
T ss_pred ccCCccEEEEC-CcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhh------cCCeEEecCCHHHHHHHHHHH
Confidence 45678999999 99999999999999999999999999987433333333222 235789999999999999999
Q ss_pred hc---CCceEEEEeecCChhHHHHHHHHHhCCCeeceeee-cCCCCeeEEEEEcCCCceeeecccccccCCCcccCCc--
Q 018120 92 GF---GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRM-KRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA-- 165 (360)
Q Consensus 92 ~l---G~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~-~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~-- 165 (360)
| |.++.++|.||+|.+|+++++.|++.||+++++.. .+.+|+.++++++ +|+|+++.+.+++..+++++++.
T Consensus 94 -L~~~G~~~~~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~~ga~~~l~~~~~~~~~ 171 (370)
T 3vas_A 94 -IIQKPFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTYLGAACDLSLAHIEQPH 171 (370)
T ss_dssp -HHCCTTCEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEEEEGGGGCCHHHHTSHH
T ss_pred -hcCCCCcEEEEEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe-CCceeEEEccchhhhCCHHHcCchh
Confidence 8 99999999999999999999999999999999987 4558999999998 89999998888888898888775
Q ss_pred --cccCCCcEEEEe-ec-ccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhc
Q 018120 166 --EDVKGSKWLVLR-FG-MFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241 (360)
Q Consensus 166 --~~~~~~~~v~~~-~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~ 241 (360)
+.+.+++++|++ +. .++++.+.++++.++++|+++++|++.+.....+++.+.++++ ++|++++|++|+..|++
T Consensus 172 ~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~l~~ll~--~~dil~~N~~Ea~~l~g 249 (370)
T 3vas_A 172 VWSLVEKAQVYYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMIS--YSNIVFGNESEAEAYGE 249 (370)
T ss_dssp HHHHHHHCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHT--TCSEEEEEHHHHHHHHH
T ss_pred hHHHHhhCCEEEEEeeeccCCHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHh--hCCEEEcCHHHHHHHhc
Confidence 467899999998 22 2357889999999999999999999877666667788899998 99999999999999987
Q ss_pred CC--CCCcHHHHHHHHHc--------CCCEEEEEeCCCceEEEE--CCEEEEeCCcCC--CcccCCCCccHHhHHHHHHH
Q 018120 242 GE--ENADSEAALEFLAK--------RCQWAVVTLGPNGCIAKH--GKEIVKVPAIGE--AKAIDATGAGDLFASGFLYG 307 (360)
Q Consensus 242 ~~--~~~~~~~~~~~l~~--------~~~~vivt~G~~G~~~~~--~~~~~~~~~~~~--~~vvdttGAGD~f~ag~~~~ 307 (360)
.. +.++++++.+.+.. +.+.||||+|++|+++++ +++.+++|+++. .+++|||||||+|+|||+++
T Consensus 250 ~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~ 329 (370)
T 3vas_A 250 VHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIAD 329 (370)
T ss_dssp HTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHHHHHH
T ss_pred ccCCCccCHHHHHHHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHHHHHH
Confidence 53 22466666665553 789999999999999999 888899998842 38999999999999999999
Q ss_pred HHcCCCHHHHHHHHHHHhcchhcccCCccC
Q 018120 308 LVKGLSLEECCKVGSCSGGSVIRSLGGEVT 337 (360)
Q Consensus 308 l~~~~~l~~a~~~a~~aaa~~v~~~G~~~~ 337 (360)
|++|+++++|+++|+++|+.+|++.|++..
T Consensus 330 l~~g~~l~~a~~~A~aaAa~~v~~~G~~~p 359 (370)
T 3vas_A 330 YIRGKPMITSLHAAVKAAAYIICRSGFSLG 359 (370)
T ss_dssp HTTTCCHHHHHHHHHHHHHHHHTSSSSCCC
T ss_pred HHCCCCHHHHHHHHHHHHHHHHcccCCcCC
Confidence 999999999999999999999999998753
No 5
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=100.00 E-value=1.1e-50 Score=380.03 Aligned_cols=314 Identities=23% Similarity=0.360 Sum_probs=263.6
Q ss_pred ccCCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHh
Q 018120 12 ASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSV 91 (360)
Q Consensus 12 ~~~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~ 91 (360)
..++++|+++| |+++|+++++++.||+++++++|.+.+.+.......-..... ......+||++.|+|+++++
T Consensus 20 ~~~~~~v~~iG-~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~------~~~~~~~GG~~~N~a~~~~~ 92 (365)
T 3loo_A 20 SLRDGMLVGLG-NPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEK------YQAEYIAGGSVQNSLRVAQW 92 (365)
T ss_dssp -CCTTSEEEEC-CCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHH------HCCEEEEECHHHHHHHHHHH
T ss_pred cCCCccEEEEC-CCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhc------CCeEEecCCHHHHHHHHHHH
Confidence 36778999999 999999999999999999999999988542221111111111 14679999999999999987
Q ss_pred hc---CCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeecccccccCCCcccCCc---
Q 018120 92 GF---GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--- 165 (360)
Q Consensus 92 ~l---G~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~--- 165 (360)
| |.++.++|.||+|.+|+.+++.|++.||+++++...+.+|+.|+++++ +++|+++.+.+++..+++++++.
T Consensus 93 -L~~lG~~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~Tg~~~i~~~-~~~r~~~~~~ga~~~~~~~~~~~~~~ 170 (365)
T 3loo_A 93 -ILQRPRTAIFFGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVT-GTQRSLCANLAAANDFTPEHLRSDGN 170 (365)
T ss_dssp -HHTCTTSEEEEEEEESBHHHHHHHHHHHHHTCEEEEEEESSSCCEEEEEEEE-TTEEEEEEECGGGGGCCGGGGGSHHH
T ss_pred -hhcCCCcEEEEEEecCCchHHHHHHHHHHCCCceeccccCCCCCeEEEEEEE-CCceEEEeccchHhhCCHhHcCchhh
Confidence 5 999999999999999999999999999999999885558999999998 78999988888888898888764
Q ss_pred -cccCCCcEEEEe-ec-ccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcC
Q 018120 166 -EDVKGSKWLVLR-FG-MFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRG 242 (360)
Q Consensus 166 -~~~~~~~~v~~~-~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~ 242 (360)
+.+.+++++|++ +. ..+++.+.++++.++++|+++++|++.+.....+++.+.++++ ++|++++|++|++.|++.
T Consensus 171 ~~~~~~~~~v~i~G~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~--~~dil~~N~~Ea~~l~g~ 248 (365)
T 3loo_A 171 RAYLQGAQFFYVSGFFFTVSFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNLEEIFP--YVDVLFGNETEAIALAKE 248 (365)
T ss_dssp HHHHHHCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHHHHHGG--GCSEEEEEHHHHHHHHHH
T ss_pred HHHHhhCCEEEEeeeeccCCHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHHHHHHH--hCCEEecCHHHHHHHhcc
Confidence 457899999998 22 2357888999999999999999999877666677888999998 999999999999999875
Q ss_pred C--CCCcHHHHHHHHHc-------CCCEEEEEeCCCceEEE--ECCEEEEeCCcCC--CcccCCCCccHHhHHHHHHHHH
Q 018120 243 E--ENADSEAALEFLAK-------RCQWAVVTLGPNGCIAK--HGKEIVKVPAIGE--AKAIDATGAGDLFASGFLYGLV 309 (360)
Q Consensus 243 ~--~~~~~~~~~~~l~~-------~~~~vivt~G~~G~~~~--~~~~~~~~~~~~~--~~vvdttGAGD~f~ag~~~~l~ 309 (360)
. +.++.+++.+.+.. +++.||||+|++|++++ ++++.+++|+++. .+++|||||||+|+|||+++|+
T Consensus 249 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~ 328 (365)
T 3loo_A 249 FNYGTEDLREIGKRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLL 328 (365)
T ss_dssp TTCCCCCHHHHHHHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHHHHH
Confidence 3 23567776666654 78999999999999999 7788889999853 3899999999999999999999
Q ss_pred cCCCHHHHHHHHHHHhcchhcccCCcc
Q 018120 310 KGLSLEECCKVGSCSGGSVIRSLGGEV 336 (360)
Q Consensus 310 ~~~~l~~a~~~a~~aaa~~v~~~G~~~ 336 (360)
+|+++++|+++|+++|+.+|++.|+++
T Consensus 329 ~g~~l~~a~~~a~~~Aa~~v~~~G~~~ 355 (365)
T 3loo_A 329 QSRTVDVCIKCGIWAAREIIQRSGCTF 355 (365)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHGGGGG
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999999999875
No 6
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=100.00 E-value=5.2e-47 Score=347.32 Aligned_cols=287 Identities=20% Similarity=0.250 Sum_probs=248.7
Q ss_pred cccCCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHH
Q 018120 11 EASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLS 90 (360)
Q Consensus 11 ~~~~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la 90 (360)
..+-+++|+++| ++++|+++.++ ++|.+ |+. .+.......+||++.|+|++|+
T Consensus 15 ~~~mm~~i~viG-~~~iD~~~~v~-----~~p~~-g~~--------------------~~~~~~~~~~GG~~~NvA~~la 67 (310)
T 3go6_A 15 VGPMAPRVCVVG-SVNMDLTFVVD-----ALPRP-GET--------------------VLAASLTRTPGGKGANQAVAAA 67 (310)
T ss_dssp ----CCEEEEEC-CCEEEEEEECS-----SCCCT-TCC--------------------CCCSEEEEEEECHHHHHHHHHH
T ss_pred cccccCCEEEEC-CceEEEEEecC-----CCCCC-CCe--------------------EEecceeecCCCHHHHHHHHHH
Confidence 334568999999 99999999985 55422 211 1223578999999999999999
Q ss_pred hhcCCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeecccccccCCCcccCCccccCC
Q 018120 91 VGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKG 170 (360)
Q Consensus 91 ~~lG~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 170 (360)
+ ||.++.++|.+|+|.+|+.+++.|++.||+++++...+.+|+.++++++++|+|+++.+.++...++ ++ .+.+++
T Consensus 68 ~-LG~~~~~i~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~--~~-~~~l~~ 143 (310)
T 3go6_A 68 R-AGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT--PV-PSAVAN 143 (310)
T ss_dssp H-TTCEEEEECEECSSHHHHHHHHHHHHTTCBCTTCEECSSCCEEEEEEECTTSCEEEEEECGGGGGCC--CC-TTTTTT
T ss_pred H-CCCCeEEEEEECCCHHHHHHHHHHHHcCCccceeEecCCCCCEEEEEEcCCCCEEEEecCChhhhHH--HH-HHHhhc
Confidence 9 9999999999999999999999999999999999776678999999999899999988877766666 44 556889
Q ss_pred CcEEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCCCcHHH
Q 018120 171 SKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEENADSEA 250 (360)
Q Consensus 171 ~~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~~~~~~ 250 (360)
+|+++++. ..+.+.+..+++.+++.+.++++|++... .+++.+.++++ ++|++++|++|+..|++.
T Consensus 144 ~~~v~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~~~---~~~~~~~~ll~--~~dil~~N~~Ea~~l~g~-------- 209 (310)
T 3go6_A 144 CDVLLTQL-EIPVATALAAARAAQSADAVVMVNASPAG---QDRSSLQDLAA--IADVVIANEHEANDWPSP-------- 209 (310)
T ss_dssp CSEEEECS-SSCHHHHHHHHHHHHHTTCEEEEECCSSS---CCHHHHHHHHH--HCSEEEEEHHHHHHSSSC--------
T ss_pred CCEEEECC-CCCHHHHHHHHHHHHHcCCEEEEcCCccc---cchHHHHHHHh--hCCEEEeCHHHHHHHhCC--------
Confidence 99999983 35788999999999999999999998542 24566777887 899999999999999863
Q ss_pred HHHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHc----CCCHHHHHHHHHHHhc
Q 018120 251 ALEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVK----GLSLEECCKVGSCSGG 326 (360)
Q Consensus 251 ~~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~----~~~l~~a~~~a~~aaa 326 (360)
.+.|+||+|++|++++++++.+++|+++ ++++||+||||+|+|||+++|++ |+++++|+++|+++|+
T Consensus 210 --------~~~vvvt~G~~Ga~~~~~~~~~~~~~~~-v~vvdttGAGDaF~ag~~~~l~~~~~~g~~l~~a~~~A~~~aa 280 (310)
T 3go6_A 210 --------PTHFVITLGVRGARYVGADGVFEVPAPT-VTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGA 280 (310)
T ss_dssp --------CSEEEEECGGGCEEEEETTEEEEECCCC-CCCSCCTTHHHHHHHHHHHHCCSSSCCHHHHHHHHHHHHHHHH
T ss_pred --------CCEEEEEECCCCEEEEECCceEEeCCCC-CCcCcCCCchHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHH
Confidence 6899999999999999999999999995 78999999999999999999999 9999999999999999
Q ss_pred chhcccCCccCcccHHHHHHHHHHc
Q 018120 327 SVIRSLGGEVTPENWQWMRKQMQIR 351 (360)
Q Consensus 327 ~~v~~~G~~~~~~~~~~~~~~~~~~ 351 (360)
.+|++.|+..+.|+.++++++++.+
T Consensus 281 ~~v~~~G~~~~~p~~~ev~~~l~~~ 305 (310)
T 3go6_A 281 LATLVSGVGDCAPAAAAIDAALRAN 305 (310)
T ss_dssp HHTTSSCSTTCCCCHHHHHHHHHTC
T ss_pred HHhCCCCCCCCCCCHHHHHHHHHhc
Confidence 9999999998999999999998854
No 7
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=100.00 E-value=2.6e-47 Score=353.80 Aligned_cols=302 Identities=20% Similarity=0.204 Sum_probs=240.9
Q ss_pred CCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhc
Q 018120 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (360)
Q Consensus 14 ~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~l 93 (360)
++++|+++| +.++|++...+ +.+.+ .......+||++.|+|++|++ |
T Consensus 3 ~~~~v~viG-~~~iD~~~~~~-----~~~~~--------------------------~~~~~~~~GG~~~NvA~~la~-L 49 (338)
T 3ljs_A 3 LKKTILCFG-EALIDMLAQPL-----VKKGM--------------------------PRAFLQCAGGAPANVAVAVAR-L 49 (338)
T ss_dssp -CCEEEEES-CCEEEEEECCC-----SSTTS--------------------------CCCEEEEEECHHHHHHHHHHH-H
T ss_pred CCCCEEEEC-hhhhheeccCC-----CCccc--------------------------hhceeecCCChHHHHHHHHHh-C
Confidence 567899999 99999999874 22211 125789999999999999999 9
Q ss_pred CCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeeccc--ccccCCCcccCCccccCC
Q 018120 94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCL--SNAVKIQADELIAEDVKG 170 (360)
Q Consensus 94 G~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~~~--~~~~~~~~~~~~~~~~~~ 170 (360)
|.++.++|.||+|.+|+++++.|++.||+++++...++ +|+.+++.++++|+|++..+. ++...+++++++...+++
T Consensus 50 G~~~~~ig~vG~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~~~~~~ 129 (338)
T 3ljs_A 50 GGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDASFSD 129 (338)
T ss_dssp TCCEEEESEEESSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCHHHHHT
T ss_pred CCCEEEEeeccCCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCHhHhcC
Confidence 99999999999999999999999999999999987554 899999999988999876544 556678888888777889
Q ss_pred CcEEEEe-eccc---CHHHHHHHHHHHHHCCCeEEEeCCChhH----HHhhhHHHHHhhccCCccEEEcCHHHHHHhhcC
Q 018120 171 SKWLVLR-FGMF---NFEVIQAAIRIAKQEGLSVSMDLASFEM----VRNFRTPLLQLLESGDVDLCFANEDEAAELVRG 242 (360)
Q Consensus 171 ~~~v~~~-~~~~---~~~~~~~~~~~a~~~~~~v~~d~~~~~~----~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~ 242 (360)
++++|++ +... +.+.+.++++.++++|.+++|||+.... ...+++.+.++++ ++|++++|++|+..|++.
T Consensus 130 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~--~~dil~~N~~E~~~l~g~ 207 (338)
T 3ljs_A 130 ALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLS--LADVVKLSSEELDYLANT 207 (338)
T ss_dssp EEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHH--TCSEEEEEHHHHHHHHHH
T ss_pred CCEEEECChHhcCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHh--hCCEEEecHHHHHHHhCC
Confidence 9999998 3332 2478889999999999999999964321 1134566778888 899999999999999985
Q ss_pred CCCCcHHHHHHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcC-----------
Q 018120 243 EENADSEAALEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKG----------- 311 (360)
Q Consensus 243 ~~~~~~~~~~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~----------- 311 (360)
...+..+.+.++++.+++.|+||+|++|++++++++.+++|+++ ++++|||||||+|+|||+++|++|
T Consensus 208 ~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~-v~vvDttGAGDaF~a~~~~~l~~g~~~~~~~~~~~ 286 (338)
T 3ljs_A 208 LAADANAVIQQLWQGRAQLLLVTDAAGPVHWYTRTAGGEVPTFR-VQVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFC 286 (338)
T ss_dssp HTSCHHHHHHHHTTTTCCEEEEEETTEEEEEEESSCEEEECC------------CHHHHHHHHHHHHHHCSSTHHHHHHH
T ss_pred CChhHHHHHHHHHhcCCCEEEEeeCCCceEEEECCceEEeCCCC-CccCCCCCccHHHHHHHHHHHHhCCCcccchhccc
Confidence 43222124455556688999999999999999999999999984 889999999999999999999999
Q ss_pred ---CCHHHHHHHHHHHhcchhcccCCccCcccHHHHHHHHHHc
Q 018120 312 ---LSLEECCKVGSCSGGSVIRSLGGEVTPENWQWMRKQMQIR 351 (360)
Q Consensus 312 ---~~l~~a~~~a~~aaa~~v~~~G~~~~~~~~~~~~~~~~~~ 351 (360)
+++++|+++|+++|+.+|++.|+..+.|+.++++++++..
T Consensus 287 ~~~~~l~~al~~A~~~aa~~v~~~Ga~~~~p~~~ev~~~~~~~ 329 (338)
T 3ljs_A 287 HDPESIVSTLRFAAAVGALAVTRQGAFTAMPMLSEVLSLIQEQ 329 (338)
T ss_dssp TCHHHHHHHHHHHHHHHGGGC----CCCCTTHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHhhh
Confidence 8999999999999999999999998999999999998854
No 8
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=2.8e-46 Score=347.12 Aligned_cols=296 Identities=21% Similarity=0.311 Sum_probs=251.7
Q ss_pred CCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhc
Q 018120 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (360)
Q Consensus 14 ~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~l 93 (360)
++.+|+++| ++++|+++.++ ++|.+.+ . .+.......+||+++|+|++|++ |
T Consensus 28 ~~~~i~viG-~~~iD~~~~~~-----~~p~~~~-~--------------------~~~~~~~~~~GG~~~NvA~~la~-L 79 (343)
T 2rbc_A 28 GGKHVLCVG-AAVLDTLFRVA-----DMPKGEG-K--------------------VLPYEVLQIAEGMASSAAYAVHR-M 79 (343)
T ss_dssp CCCEEEEES-CCEEEEEEECS-----SCCCSSS-C--------------------CCCSEEEEEEECHHHHHHHHHHH-T
T ss_pred cCCeEEEEC-cceEEEEeecC-----CCCCCCC-e--------------------EeeeeeEEcCCcHHHHHHHHHHH-c
Confidence 345899999 99999999985 4543221 1 11224678999999999999999 9
Q ss_pred CCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeecccccccCCCcccCCccccCCCc
Q 018120 94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSK 172 (360)
Q Consensus 94 G~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (360)
|.++.++|.+|+|.+|+++++.|++.||+++++...++ +|+.++++++++|+|+++.+.++...++++++..+.+.+++
T Consensus 80 G~~~~~i~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~~~~l~~~~ 159 (343)
T 2rbc_A 80 GGRASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTPEDIALFD 159 (343)
T ss_dssp TCEEEEECEEESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECCGGGGSSCCCCCHHHHTTCS
T ss_pred CCceEEEEEeCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCCCcccCChhHhcHhhhCCCC
Confidence 99999999999999999999999999999999887654 89999999998899998767776666777777666788999
Q ss_pred EEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHH-hhccCCccEEEcCHHHHHHhhcCCCCCcHHHH
Q 018120 173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQ-LLESGDVDLCFANEDEAAELVRGEENADSEAA 251 (360)
Q Consensus 173 ~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~-~l~~~~~dil~~n~~E~~~l~~~~~~~~~~~~ 251 (360)
+++++.. .++.+.++++.+++.++++++||.. +++.+.+ +++ ++|++++|++|+..|++.. +++++
T Consensus 160 ~v~~~~~--~~~~~~~~~~~a~~~g~~v~~Dp~~------~~~~~~~~ll~--~~dil~~N~~Ea~~l~g~~---~~~~~ 226 (343)
T 2rbc_A 160 AVLVDVR--WPELALDVLTVARALGKPAILDGDV------APVETLEGLAP--AATHIVFSEPAATRLTGLE---TVKDM 226 (343)
T ss_dssp EEEECSS--SHHHHHHHHHHHHHTTCCEEEEECS------CCHHHHHHHGG--GCSEEEEEHHHHHHHHCCS---SHHHH
T ss_pred EEEEcCC--CHHHHHHHHHHHHHCCCEEEEECCc------cccccHHHHHh--cCCEEEeCHHHHHHHcCCC---CHHHH
Confidence 9999832 3578889999999999999999974 3456666 788 8999999999999999853 55555
Q ss_pred H-HHHHcCC-CEEEEEeCCCceEEEECC--EEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHHHHhcc
Q 018120 252 L-EFLAKRC-QWAVVTLGPNGCIAKHGK--EIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVGSCSGGS 327 (360)
Q Consensus 252 ~-~~l~~~~-~~vivt~G~~G~~~~~~~--~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~~aaa~ 327 (360)
. .+...++ +.|+||+|++|+++++++ +.+++|+++ ++++|||||||+|+|||+++|++|+++++|+++|+++|+.
T Consensus 227 ~~~l~~~g~~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~-v~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~~aa~ 305 (343)
T 2rbc_A 227 LPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQ-VEAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVAAAL 305 (343)
T ss_dssp HHHHHHHSTTSEEEEECGGGCEEEECTTCCCEEEECCCC-CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCceEEEEECCcceEEEeCCCceeEEecCCC-CccccCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 4 4555578 999999999999999887 789999984 7899999999999999999999999999999999999999
Q ss_pred hhcccCCccCcccHHHHHHHHHHc
Q 018120 328 VIRSLGGEVTPENWQWMRKQMQIR 351 (360)
Q Consensus 328 ~v~~~G~~~~~~~~~~~~~~~~~~ 351 (360)
+|++.|+....++.++++++++..
T Consensus 306 ~v~~~G~~~~~p~~~ev~~~l~~~ 329 (343)
T 2rbc_A 306 KCTVFGGRIGAPTREETEEAMRQW 329 (343)
T ss_dssp HHTSSSGGGGCCCHHHHHHHHHHH
T ss_pred HhCCCCCccCCCCHHHHHHHHHhc
Confidence 999999987788888888887654
No 9
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=100.00 E-value=3e-46 Score=347.70 Aligned_cols=311 Identities=24% Similarity=0.339 Sum_probs=259.3
Q ss_pred CCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhc
Q 018120 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (360)
Q Consensus 14 ~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~l 93 (360)
++.+|+++| ++++|+++.++..++.++++..|++.+.+.......-..... ......+||+++|+|++|++ |
T Consensus 5 ~~~~v~viG-~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~------~~~~~~~GG~~~NvA~~la~-l 76 (345)
T 1bx4_A 5 RENILFGMG-NPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKK------FKVEYHAGGSTQNSIKVAQW-M 76 (345)
T ss_dssp CTTCEEEEC-CCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHH------SCCEEEEECHHHHHHHHHHH-H
T ss_pred ccccEEEEC-CcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhcc------CCceecCCcHHHHHHHHHHH-h
Confidence 567899999 999999999998899999999998877642212211111110 14789999999999999999 8
Q ss_pred C----CceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeecccccccCCCcc-cCC----
Q 018120 94 G----VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQAD-ELI---- 164 (360)
Q Consensus 94 G----~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~-~~~---- 164 (360)
| .++.|+|.||+|.+|+++++.|++.||+++++...+.+|+.++++++ +|+|+++.+.+++..++++ +++
T Consensus 77 gg~~~~~~~~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~T~~~~~~~~-~g~r~~~~~~~a~~~~~~~~~~~~~~~ 155 (345)
T 1bx4_A 77 IQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACIT-GDNRSLIANLAAANCYKKEKHLDLEKN 155 (345)
T ss_dssp HCSSTTCEEEEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEE-TTEEEEEEECGGGGGCCGGGTTTSHHH
T ss_pred cCCCCCcEEEEEEeCCChhHHHHHHHHHHcCCceeeeecCCCCCceEEEEEc-CCceEeeeccchHhhcCcccccCcHHH
Confidence 6 99999999999999999999999999999998765558999999987 7889887777777778887 776
Q ss_pred ccccCCCcEEEEe-e-cccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcC
Q 018120 165 AEDVKGSKWLVLR-F-GMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRG 242 (360)
Q Consensus 165 ~~~~~~~~~v~~~-~-~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~ 242 (360)
.+.+++++++|++ + ..++.+.+..+++.+++.++++++|++++...+.+++.+.++++ ++|++++|++|+..|++.
T Consensus 156 ~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~g~ 233 (345)
T 1bx4_A 156 WMLVEKARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMP--YVDILFGNETEAATFARE 233 (345)
T ss_dssp HHHHHHCSEEEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGG--GCSEEEEEHHHHHHHHHH
T ss_pred HHHHhhCCEEEEEEEeccCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHhc--cCCEEeCCHHHHHHHhcc
Confidence 2456789999998 2 23578899999999999999999999876444445667788888 899999999999999874
Q ss_pred C--CCCcHHHHHHHHHc-------CCCEEEEEeCCCceEEEECCEEEEeCCcCCC---cccCCCCccHHhHHHHHHHHHc
Q 018120 243 E--ENADSEAALEFLAK-------RCQWAVVTLGPNGCIAKHGKEIVKVPAIGEA---KAIDATGAGDLFASGFLYGLVK 310 (360)
Q Consensus 243 ~--~~~~~~~~~~~l~~-------~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~---~vvdttGAGD~f~ag~~~~l~~ 310 (360)
. +.++.+++.+.+.+ +.+.|+||+|++|++++++++.+++|+++ . +++|||||||+|+|||+++|++
T Consensus 234 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~~~~vvDttGAGDaf~ag~~~~l~~ 312 (345)
T 1bx4_A 234 QGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLD-QDQKEIIDTNGAGDAFVGGFLSQLVS 312 (345)
T ss_dssp TTCCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCC-CCCTTCCCHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccc-cCcCccccCCCcchHHHHHHHHHHHc
Confidence 3 23456665555544 78999999999999999888889999874 4 8999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcchhcccCCcc
Q 018120 311 GLSLEECCKVGSCSGGSVIRSLGGEV 336 (360)
Q Consensus 311 ~~~l~~a~~~a~~aaa~~v~~~G~~~ 336 (360)
|+++++|+++|+++|+.++++.|+..
T Consensus 313 g~~~~~a~~~A~~~aa~~v~~~G~~~ 338 (345)
T 1bx4_A 313 DKPLTECIRAGHYAASIIIRRTGCTF 338 (345)
T ss_dssp TCCHHHHHHHHHHHHHHHTTSSSSCC
T ss_pred CCCHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999863
No 10
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=100.00 E-value=1.9e-46 Score=346.14 Aligned_cols=304 Identities=24% Similarity=0.326 Sum_probs=245.4
Q ss_pred cCCCeEEEecCCeeEEEEeecCHhHHh---hCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHH
Q 018120 13 SQAALILGLQPAALIDHVARVDWSLLD---QIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGL 89 (360)
Q Consensus 13 ~~~~~i~~iG~~~~lD~i~~~~~~~l~---~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~l 89 (360)
++.++|+||| .+++|++.......+. .+| .......+||++.|+|++|
T Consensus 3 m~~~~v~~iG-~~~~D~~~~~~~~~~~~~~~~p----------------------------~~~~~~~~GG~~~NvA~~l 53 (325)
T 3h49_A 3 LDNLDVICIG-AAIVDIPLQPVSKNIFDVDSYP----------------------------LERIAMTTGGDAINEATII 53 (325)
T ss_dssp --CEEEEEES-CCEEEEEECSCCGGGGGSSCCC----------------------------CSCCCCEEESHHHHHHHHH
T ss_pred CCCCeEEEEC-hhhheeeccCCCCccccccccc----------------------------hheeEEccCcHHHHHHHHH
Confidence 3567999999 9999998764321111 111 0146789999999999999
Q ss_pred HhhcCCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeeccccc-ccCCCcccCCccc
Q 018120 90 SVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSN-AVKIQADELIAED 167 (360)
Q Consensus 90 a~~lG~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~~~~~-~~~~~~~~~~~~~ 167 (360)
++ ||.++.++|.||+|.+|+++++.|++.||+++++...++ +|+.++++++++|+|+++.+.+. ...++.++++.+.
T Consensus 54 a~-LG~~~~~ig~vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~ 132 (325)
T 3h49_A 54 SR-LGHRTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFAR 132 (325)
T ss_dssp HH-TTCEEEEECEEESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTTSHHHHCCGGGCCGGG
T ss_pred HH-CCCCeEEEEEECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEeccCcccccCChhhcChhh
Confidence 99 999999999999999999999999999999999887654 89999999998999998876543 3567788887778
Q ss_pred cCCCcEEEEeec----ccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCC
Q 018120 168 VKGSKWLVLRFG----MFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGE 243 (360)
Q Consensus 168 ~~~~~~v~~~~~----~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~ 243 (360)
+.++++++++.. ..+.+.+.++++.+++++. +++|+..........+.+.++++ ++|++++|++|+..|++..
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~-~~~d~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~g~~ 209 (325)
T 3h49_A 133 FSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQM-IICADMIKPRLNETLDDICEALS--YVDYLFPNFAEAKLLTGKE 209 (325)
T ss_dssp GGGCSEEEEEEETTSTTSCHHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHHHHT--TCSEEECBHHHHHHHHTCS
T ss_pred hccCCEEEEecccCCcccCHHHHHHHHHHHHhcCC-EEEecCCchhhhhHHHHHHHHHh--hCCEEecCHHHHHHHhCCC
Confidence 899999999831 1245788999999999984 55554211111122355677888 8999999999999999853
Q ss_pred CCCcHHHHHH-HHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHH
Q 018120 244 ENADSEAALE-FLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVGS 322 (360)
Q Consensus 244 ~~~~~~~~~~-~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~ 322 (360)
+.+++.+ ++..+++.|+||+|++|++++++++.+++|+++..+++|||||||+|+|||++++++|+++++|+++|+
T Consensus 210 ---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~A~ 286 (325)
T 3h49_A 210 ---TLDEIADCFLACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFAN 286 (325)
T ss_dssp ---SHHHHHHHHHTTTCSEEEEECTTSCEEEEETTEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred ---CHHHHHHHHHHcCCCEEEEEeCCCCeEEEECCeEEEecCcCCCCCcCCCChhHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 4555544 445588999999999999999999999999986558999999999999999999999999999999999
Q ss_pred HHhcchhcccCCccCcccHHHHHHHHHHcC
Q 018120 323 CSGGSVIRSLGGEVTPENWQWMRKQMQIRG 352 (360)
Q Consensus 323 ~aaa~~v~~~G~~~~~~~~~~~~~~~~~~~ 352 (360)
++|+.+|++.|+..+.|+.++++++++...
T Consensus 287 ~~aa~~v~~~G~~~~~p~~~ev~~~l~~~~ 316 (325)
T 3h49_A 287 ATAAISVLSVGATTGVKNRKLVEQLLEEYE 316 (325)
T ss_dssp HHHHHHHTSSSSSSSCSSSHHHHTC-----
T ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHHhcc
Confidence 999999999999988999999988877543
No 11
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=5.9e-47 Score=346.39 Aligned_cols=294 Identities=20% Similarity=0.268 Sum_probs=251.0
Q ss_pred CeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCC
Q 018120 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (360)
Q Consensus 16 ~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~ 95 (360)
++|+++| ++++|+++.++ ++|.+.. .. .+.......+||++.|+|.+|++ ||.
T Consensus 3 ~~v~viG-~~~~D~~~~~~-----~~p~~g~-~~-------------------~~~~~~~~~~GG~~~NvA~~la~-lG~ 55 (304)
T 3ry7_A 3 NKVVILG-STNVDQFLTVE-----RYAQPGE-TL-------------------HVEEAQKAFGGGKGANQAIATAR-MQA 55 (304)
T ss_dssp CEEEEEC-CCEEEEEEECS-----SCCCTTC-CC-------------------CCSSCCEEEEECHHHHHHHHHHH-TTC
T ss_pred CcEEEEc-cceeEEEEecc-----CCCCCCC-ce-------------------ecccceeecCCCHHHHHHHHHHH-CCC
Confidence 6899999 99999999985 5553322 11 02235789999999999999999 999
Q ss_pred ceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeecccccccCCCcccCCc--cccCCCc
Q 018120 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--EDVKGSK 172 (360)
Q Consensus 96 ~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~~ 172 (360)
++.++|.+|+|.+|+.+++.|++.||+++++...++ +|+.++++++++|+|+++.+.++...+++++++. +.+++++
T Consensus 56 ~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~ 135 (304)
T 3ry7_A 56 DTTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVINAKDAIINAD 135 (304)
T ss_dssp EEEEECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHHTTHHHHHTCS
T ss_pred CeEEEEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHHHHHHHhccCC
Confidence 999999999999999999999999999999987554 8999999999889999888888777888776643 4578999
Q ss_pred EEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCC--CcHHH
Q 018120 173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEEN--ADSEA 250 (360)
Q Consensus 173 ~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~--~~~~~ 250 (360)
+++++ ...+.+.+..+++.+++++.++++|++.. ++.+.++++ ++|++++|++|+..|++.... ++..+
T Consensus 136 ~v~~~-~~~~~~~~~~~~~~a~~~~~~v~~D~~~~------~~~~~~ll~--~~dil~~N~~E~~~l~g~~~~~~~~~~~ 206 (304)
T 3ry7_A 136 FVVAQ-LEVPIPAIISAFEIAKAHGVTTVLNPAPA------KALPNELLS--LIDIIVPNETEAELLSGIKVTNEQSMKD 206 (304)
T ss_dssp EEEEE-TTSCHHHHHHHHHHHHHTTCEEEEECCSC------CCCCHHHHT--TCSEECCBHHHHHHHHSCCCCSHHHHHH
T ss_pred EEEEc-CCCCHHHHHHHHHHHHHcCCEEEEeCCcc------ccccHHHHH--hCCEEecCHHHHHHHhCCCCCChhHHHH
Confidence 99998 34578999999999999999999999753 233455666 899999999999999986532 23333
Q ss_pred -HHHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcC-CCHHHHHHHHHHHhcch
Q 018120 251 -ALEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKG-LSLEECCKVGSCSGGSV 328 (360)
Q Consensus 251 -~~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~-~~l~~a~~~a~~aaa~~ 328 (360)
+.++++.+.+.|+||+|++|++++++++.+++|+++ .+++|||||||+|+|||++++++| +++++|+++|+++|+.+
T Consensus 207 ~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~~vdttGAGDaf~a~~~~~l~~g~~~~~~a~~~A~~~aa~~ 285 (304)
T 3ry7_A 207 NANYFLSIGIKTVLITLGKQGTYFATKNQSQHIEAYK-VNAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKASSLT 285 (304)
T ss_dssp HHHHHHHTTCCEEEEECGGGCEEEECSSCEEEECCSS-CCSSCCSSHHHHHHHHHHHHCCTTCTTHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEEeCCCceEEEECCeeEEecCCC-cccCCCCCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 344556688999999999999999999999999994 889999999999999999999999 99999999999999999
Q ss_pred hcccCCccCcccHHHHHH
Q 018120 329 IRSLGGEVTPENWQWMRK 346 (360)
Q Consensus 329 v~~~G~~~~~~~~~~~~~ 346 (360)
|++.|+..+.|+.+++++
T Consensus 286 ~~~~G~~~~~p~~~ev~~ 303 (304)
T 3ry7_A 286 VQKHGAQASIPLLEEVNQ 303 (304)
T ss_dssp SCCCCTGGGCCCHHHHHT
T ss_pred hCCCCccccCCCHHHHhh
Confidence 999999988899988865
No 12
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=100.00 E-value=4.7e-46 Score=344.26 Aligned_cols=308 Identities=20% Similarity=0.278 Sum_probs=247.7
Q ss_pred CCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcC
Q 018120 15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG 94 (360)
Q Consensus 15 ~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG 94 (360)
+++|+++| .+++|++...+ ..+.... ......++||+++|+|++|++ ||
T Consensus 3 m~~i~viG-~~~~D~~~~~~-----~~~~~~~------------------------~~~~~~~~GG~~~NvA~~la~-LG 51 (330)
T 3iq0_A 3 LSKVFTIG-EILVEIMASKI-----GQPFDQP------------------------GIWNGPYPSGAPAIFIDQVTR-LG 51 (330)
T ss_dssp -CEEEEES-CCEEEEEEEEE-----TCCSSSC------------------------EEEEEEEEECHHHHHHHHHHH-TT
T ss_pred CCCEEEEc-ceeEEEeccCC-----CCCcccc------------------------ccccCcCCCCHHHHHHHHHHH-CC
Confidence 46899999 99999998742 1110000 001357899999999999999 99
Q ss_pred CceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeec--ccccccCCCcccCCccccCCC
Q 018120 95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRP--CLSNAVKIQADELIAEDVKGS 171 (360)
Q Consensus 95 ~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~--~~~~~~~~~~~~~~~~~~~~~ 171 (360)
.++.++|.+|+|.+|+.+++.|++.||+++++...++ +|+.+++.++++|+|++.. ..++...++++++....++++
T Consensus 52 ~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 131 (330)
T 3iq0_A 52 VPCGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDENILKDC 131 (330)
T ss_dssp CCEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCGGGGTTE
T ss_pred CcEEEEEEeCCChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCHhHhccC
Confidence 9999999999999999999999999999999987654 8999999999889984332 234556688888887788999
Q ss_pred cEEEEe-ecccC---HHHHHHHHHHHHHCCCeEEEeCCChhH---HHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCC
Q 018120 172 KWLVLR-FGMFN---FEVIQAAIRIAKQEGLSVSMDLASFEM---VRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEE 244 (360)
Q Consensus 172 ~~v~~~-~~~~~---~~~~~~~~~~a~~~~~~v~~d~~~~~~---~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~ 244 (360)
+++|++ +.... .+.+.++++.++++++++++||+.... ...+++.+.++++ ++|++++|++|+..|++.
T Consensus 132 ~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~g~-- 207 (330)
T 3iq0_A 132 THFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVLE--LTDIYMPSEGEVLLLSPH-- 207 (330)
T ss_dssp EEEEEEGGGCSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHHH--TCSEECCBGGGTTTTCSC--
T ss_pred CEEEEechhhcCcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHHh--hCCEEecCHHHHHHHhCC--
Confidence 999998 32222 366888999999999999999985421 1224566777888 899999999999999885
Q ss_pred CCcHHHH-HHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHHH
Q 018120 245 NADSEAA-LEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVGSC 323 (360)
Q Consensus 245 ~~~~~~~-~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~~ 323 (360)
++.+++ ..++..+++.|+||+|++|++++++++.+++|+++ ++++|||||||+|+|||++++++|+++++|+++|++
T Consensus 208 -~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~-v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~ 285 (330)
T 3iq0_A 208 -STPERAIAGFLEEGVKEVIVKRGNQGASYYSANEQFHVESYP-VEEVDPTGAGDCFGGAWIACRQLGFDAHRALQYANA 285 (330)
T ss_dssp -SSHHHHHHHHHHHTCSEEEEECGGGCEEEECSSCEEEECCCC-CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHcCCCEEEEEeCCCceEEEECCceEEecCCC-CccCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 355554 44556689999999999999999999999999995 799999999999999999999999999999999999
Q ss_pred HhcchhcccCCccCcccHHHHHHHHHHcCCCCCCCC
Q 018120 324 SGGSVIRSLGGEVTPENWQWMRKQMQIRGLPIPDTR 359 (360)
Q Consensus 324 aaa~~v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (360)
+|+.+|++.|+..+.++.++++++++.+...+..++
T Consensus 286 ~aa~~v~~~G~~~~~p~~~ev~~~~~~~~~~i~~~~ 321 (330)
T 3iq0_A 286 CGALAVTRRGPMEGTSRLMEIETFIQRHDMSIREAA 321 (330)
T ss_dssp HHHHHTTSCSSSTTCCCHHHHHHHHHHC--------
T ss_pred HHHHHHcCcCCCCCCCCHHHHHHHHHhcccchhHHH
Confidence 999999999998899999999999998877766553
No 13
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=100.00 E-value=4e-47 Score=346.62 Aligned_cols=286 Identities=20% Similarity=0.248 Sum_probs=247.0
Q ss_pred CeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCC
Q 018120 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (360)
Q Consensus 16 ~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~ 95 (360)
.+|+++| ++++|+++.++ ++|.+ |+... .......+||++.|+|++|++ ||.
T Consensus 3 ~~i~viG-~~~iD~~~~~~-----~~p~~-g~~~~--------------------~~~~~~~~GG~~~NvA~~la~-lG~ 54 (299)
T 3ikh_A 3 LRVYVTG-NITVDETWSIP-----DIPKK-GASIH--------------------GVKVSQDIGGKGANQAIILSR-CGI 54 (299)
T ss_dssp CCEEEEC-CCEEEEEEECS-----SCCCT-TCEEE--------------------CEEEEEEEECHHHHHHHHHHH-TTC
T ss_pred ceEEEEC-ceEEEEEEecC-----CCCCC-CCeEE--------------------eeeeeeccCCHHHHHHHHHHH-CCC
Confidence 5799999 99999999985 56533 22211 114779999999999999999 999
Q ss_pred ceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeecccccccCCCcccCC--ccccCCCcE
Q 018120 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELI--AEDVKGSKW 173 (360)
Q Consensus 96 ~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 173 (360)
++.++|.+|+|.+|+.+++.|++.||+++++...+.+|+.++++++++|+|+++.+.++...+++++++ .+.++++++
T Consensus 55 ~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 134 (299)
T 3ikh_A 55 ETRLIAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTAAADTFSLDEMIPHMADAVAGDI 134 (299)
T ss_dssp CEEEECCCCSSHHHHHHHHHGGGSSCEEESSSCCSSCCEEEEEECSSSCSCEEEEECHHHHHCCHHHHGGGGTTCCTTCE
T ss_pred CeEEEEEECCCHHHHHHHHHHHHcCCceeeeEecCCCCcEEEEEEcCCCCeEEEEeCCccccCCHHHHHHHHhhhccCCE
Confidence 999999999999999999999999999999965555899999999989999988887777778877665 245789999
Q ss_pred EEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCCCcHHHHHH
Q 018120 174 LVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEENADSEAALE 253 (360)
Q Consensus 174 v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~ 253 (360)
+++++ ..+.+.+.++++.+++.+.++++|++.. .+.+.++++ ++|++++|++|++.|++
T Consensus 135 v~~~g-~~~~~~~~~~~~~a~~~g~~v~~D~~~~------~~~~~~ll~--~~dil~~N~~E~~~l~g------------ 193 (299)
T 3ikh_A 135 LLQQG-NFSLDKTRALFQYARSRGMTTVFNPSPV------NPDFCHLWP--LIDIAVVNESEAELLQP------------ 193 (299)
T ss_dssp EEECS-CSCHHHHHHHHHHHHHTTCEEEECCCSC------CGGGGGCGG--GCSEEEEEHHHHHHHCC------------
T ss_pred EEECC-CCCHHHHHHHHHHHHHcCCEEEEccccc------hhhHHHHHh--hCCEEEecHHHHHHHhc------------
Confidence 99983 4578899999999999999999999753 244556777 89999999999999976
Q ss_pred HHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHH-HHHHHHHcCCCHHH-HHHHHHHHhcchhcc
Q 018120 254 FLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFAS-GFLYGLVKGLSLEE-CCKVGSCSGGSVIRS 331 (360)
Q Consensus 254 ~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~a-g~~~~l~~~~~l~~-a~~~a~~aaa~~v~~ 331 (360)
.+.+.|+||+|++|++++++++.+++|+++ ++++|||||||+|+| ||+++|++|+++++ |+++|+++|+.+|++
T Consensus 194 ---~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~vvDttGAGDaf~a~~~~~~l~~g~~~~~~a~~~a~~~aa~~v~~ 269 (299)
T 3ikh_A 194 ---YGVKTLVITQGAAGAWLVQEGQRQFCPAVP-AEALDTTGAGDTFLAVMLASALLRGVAPDALALAHASRAAAITVSR 269 (299)
T ss_dssp ---CSCSEEEEECGGGCEEEECSSCEEEECCCC-CCCSCCTTHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHS
T ss_pred ---CCCCEEEEEECCCceEEEeCCceEEeCCCC-CccCCCCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCC
Confidence 578999999999999999999999999995 789999999999999 99999999999999 999999999999999
Q ss_pred cCCccCcccHHHHHHHHHHcCCC
Q 018120 332 LGGEVTPENWQWMRKQMQIRGLP 354 (360)
Q Consensus 332 ~G~~~~~~~~~~~~~~~~~~~~~ 354 (360)
.|+..+.|+.++++++++.+...
T Consensus 270 ~G~~~~~p~~~ev~~~l~~~~~~ 292 (299)
T 3ikh_A 270 RGTLSAFPGSRELAALLTTDGAE 292 (299)
T ss_dssp SSSTTTSCCHHHHHHHHC-----
T ss_pred CcccccCCCHHHHHHHHHhcccc
Confidence 99998899999999999876543
No 14
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=100.00 E-value=3.8e-46 Score=341.82 Aligned_cols=299 Identities=21% Similarity=0.291 Sum_probs=251.1
Q ss_pred CCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcC
Q 018120 15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG 94 (360)
Q Consensus 15 ~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG 94 (360)
.++|+++| ++++|+++.++ ++|.+ |+. .+.......+||++.|+|++|++ ||
T Consensus 4 ~~~v~viG-~~~iD~~~~~~-----~~p~~-g~~--------------------~~~~~~~~~~GG~~~N~A~~la~-lG 55 (309)
T 1rkd_A 4 AGSLVVLG-SINADHILNLQ-----SFPTP-GET--------------------VTGNHYQVAFGGKGANQAVAAGR-SG 55 (309)
T ss_dssp CCEEEEEC-CCEEEEEEECS-----SCCCT-TCC--------------------CCCCCEEEEEECHHHHHHHHHHH-HT
T ss_pred CCeEEEEC-cceEeEEEecC-----CCCCC-CCe--------------------eecCceeecCCCHHHHHHHHHHh-CC
Confidence 46899999 99999999985 45422 211 11235788999999999999999 99
Q ss_pred CceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeecccccccCCCcccCCc--cccCCC
Q 018120 95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--EDVKGS 171 (360)
Q Consensus 95 ~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~ 171 (360)
.++.++|.+|+|.+|+++++.|++.||+++++...++ +|+.++++++++|+|++..+.+++..+++++++. +.++++
T Consensus 56 ~~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 135 (309)
T 1rkd_A 56 ANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANA 135 (309)
T ss_dssp CEEEEEEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHTTHHHHHHC
T ss_pred CceEEEEEECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEeCCchhcCCHHHHHHHHHhcccC
Confidence 9999999999999999999999999999999987554 8999999999889999887777777777776643 357789
Q ss_pred cEEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCC--CcHH
Q 018120 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEEN--ADSE 249 (360)
Q Consensus 172 ~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~--~~~~ 249 (360)
++++++. ..+.+.+..+++.+++.+.++++|++... .+. .++++ ++|++++|++|+..|++.... ++..
T Consensus 136 ~~v~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~~~---~~~---~~ll~--~~dil~~N~~E~~~l~g~~~~~~~~~~ 206 (309)
T 1rkd_A 136 SALLMQL-ESPLESVMAAAKIAHQNKTIVALNPAPAR---ELP---DELLA--LVDIITPNETEAEKLTGIRVENDEDAA 206 (309)
T ss_dssp SEEEECS-SSCHHHHHHHHHHHHHTTCEEEECCCSCC---CCC---HHHHT--TCSEECCCHHHHHHHHSCCCSSHHHHH
T ss_pred CEEEEeC-CCCHHHHHHHHHHHHHcCCEEEEECCccc---cch---HHHHh--hCCEEEcCHHHHHHHhCCCCCCHHHHH
Confidence 9999983 34678899999999999999999997531 122 34566 899999999999999986421 1233
Q ss_pred H-HHHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHHHHhcch
Q 018120 250 A-ALEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVGSCSGGSV 328 (360)
Q Consensus 250 ~-~~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~~aaa~~ 328 (360)
+ +.++++.+++.|+||+|++|++++++++.+++|+++ ++++||+||||+|.|+|++++++|+++++|+++|+++|+.+
T Consensus 207 ~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~~a~~~aa~~ 285 (309)
T 1rkd_A 207 KAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFR-VQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIA 285 (309)
T ss_dssp HHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCC-CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEEECCCcEEEEeCCceEEcCCCC-CCcCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 3 344556688999999999999999999999999984 78999999999999999999999999999999999999999
Q ss_pred hcccCCccCcccHHHHHHHHHHc
Q 018120 329 IRSLGGEVTPENWQWMRKQMQIR 351 (360)
Q Consensus 329 v~~~G~~~~~~~~~~~~~~~~~~ 351 (360)
+++.|+....|+.++++++++.+
T Consensus 286 ~~~~G~~~~~p~~~ev~~~~~~~ 308 (309)
T 1rkd_A 286 VTRKGAQPSVPWREEIDAFLDRQ 308 (309)
T ss_dssp HTSSSSGGGCCCHHHHHHHHHTC
T ss_pred cCCCCccCCCCCHHHHHHHHhcC
Confidence 99999988889999999988743
No 15
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=100.00 E-value=3.2e-46 Score=341.19 Aligned_cols=294 Identities=21% Similarity=0.299 Sum_probs=245.9
Q ss_pred CeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCC
Q 018120 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (360)
Q Consensus 16 ~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~ 95 (360)
++|+++| ++++|+++.++ ++|.+.. . .+.......+||+++|+|.+|++ ||.
T Consensus 6 ~~i~viG-~~~iD~~~~~~-----~~p~~~~-~--------------------~~~~~~~~~~GG~~~N~A~~la~-LG~ 57 (302)
T 2c4e_A 6 EKITCVG-HTALDYIFNVE-----KFPEPNT-S--------------------IQIPSARKYYGGAAANTAVGIKK-LGV 57 (302)
T ss_dssp EEEEEES-CCEEEEEEECS-----SCCCTTC-C--------------------CCCSCEEEEEECHHHHHHHHHHH-TTC
T ss_pred CcEEEEC-ceeEEEEeccc-----ccCCCCc-e--------------------eeecceeecCCCHHHHHHHHHHH-CCC
Confidence 4799999 99999999985 4442221 1 11225788999999999999999 999
Q ss_pred ceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeecccccccCCCcccCCccccCCCcEE
Q 018120 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWL 174 (360)
Q Consensus 96 ~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~v 174 (360)
++.++|.+|+|.+|+++++.|++.||+++++...++ +|+.++++++++|+|+++.+.+++..+++++++. .+++++
T Consensus 58 ~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~v 134 (302)
T 2c4e_A 58 NSELLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPN---FNTEIV 134 (302)
T ss_dssp EEEEECEECTTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEECGGGGGGGGCCCCC---CCEEEE
T ss_pred ceEEEEEEeCCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeCChhhhCCHhhcCc---ccCCEE
Confidence 999999999999999999999999999998876555 7999999998889999887777766677766654 689999
Q ss_pred EEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCCCcHHHHHHH
Q 018120 175 VLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEENADSEAALEF 254 (360)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 254 (360)
|++.. .++.+.++++.+++++ ++++||+.... ...++.+.++++ ++|++++|++|+..|++....+ . . ++
T Consensus 135 ~~~~~--~~~~~~~~~~~a~~~g-~v~~D~~~~~~-~~~~~~~~~~l~--~~dil~~N~~E~~~l~g~~~~~-~--~-~l 204 (302)
T 2c4e_A 135 HIATG--DPEFNLKCAKKAYGNN-LVSFDPGQDLP-QYSKEMLLEIIE--HTNFLFMNKHEFERASNLLNFE-I--D-DY 204 (302)
T ss_dssp EECSS--CHHHHHHHHHHHBTTB-EEEECCGGGGG-GCCHHHHHHHHH--TCSEEEEEHHHHHHHHHHHTCC-H--H-HH
T ss_pred EEeCC--CcHHHHHHHHHHHhcC-CEEEeCchhhh-hhhHHHHHHHHh--cCCEEEcCHHHHHHHhCCCCcc-H--H-HH
Confidence 99843 3588899999999999 99999974211 011356677888 8999999999999998743221 1 1 55
Q ss_pred HHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCc-ccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHHHHhcchhcccC
Q 018120 255 LAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAK-AIDATGAGDLFASGFLYGLVKGLSLEECCKVGSCSGGSVIRSLG 333 (360)
Q Consensus 255 l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~-vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~~aaa~~v~~~G 333 (360)
+.. .+.|+||+|++|++++++++.+++|+++ ++ ++||+||||+|+|||++++++|+++++|+++|+++|+.++++.|
T Consensus 205 ~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~~~~~G 282 (302)
T 2c4e_A 205 LER-VDALIVTKGSKGSVIYTKDKKIEIPCIK-AGKVIDPTGAGDSYRAGFLSAYVKGYDLEKCGLIGAATASFVVEAKG 282 (302)
T ss_dssp HTT-CSEEEEECGGGCEEEECSSCEEEECCCC-CSCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSS
T ss_pred Hhc-CCEEEEEECCCceEEEeCCcEEEeCCcc-CCcCCcCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcccc
Confidence 666 8999999999999999888889999985 66 99999999999999999999999999999999999999999999
Q ss_pred CccCcccHHHHHHHHHHcC
Q 018120 334 GEVTPENWQWMRKQMQIRG 352 (360)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~ 352 (360)
+....++.++++++++.++
T Consensus 283 ~~~~~p~~~ev~~~~~~~~ 301 (302)
T 2c4e_A 283 CQTNLPTWDKVVERLEKHR 301 (302)
T ss_dssp SSTTCCCHHHHHHHHHHC-
T ss_pred ccccCCCHHHHHHHHHhcC
Confidence 9888899999999998764
No 16
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=100.00 E-value=2.9e-46 Score=345.39 Aligned_cols=302 Identities=18% Similarity=0.223 Sum_probs=249.6
Q ss_pred cCCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhh
Q 018120 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (360)
Q Consensus 13 ~~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~ 92 (360)
.+.++|+++| +.++|+++.++ .++.+ |+... ......+||++.|+|++|++
T Consensus 4 ~~~~~v~viG-~~~vD~~~~~~-----~~~~~-g~~~~---------------------~~~~~~~GG~~~NvA~~la~- 54 (328)
T 3kzh_A 4 RKEPYLLVFG-ASVVDVFGFSK-----ASYRP-YNSTP---------------------GHVKISFGGVCRNIAENMAR- 54 (328)
T ss_dssp CCCCCEEEEC-CCEEEEEEEES-----SCCCT-TSEEE---------------------EEEEEEEECHHHHHHHHHHH-
T ss_pred CCCCcEEEEC-cEEeeeeeccC-----CCCCC-CCCce---------------------EEEEEccCcHHHHHHHHHHH-
Confidence 4568899999 99999999985 44422 22111 03678999999999999999
Q ss_pred cCCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeee-cccccccCCCcccCC--cccc
Q 018120 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMR-PCLSNAVKIQADELI--AEDV 168 (360)
Q Consensus 93 lG~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~-~~~~~~~~~~~~~~~--~~~~ 168 (360)
||.++.++|.+|+|.+|+.+++.|++.||+++++...++ +|+.++++++++|+|++. ...+....++++.+. .+.+
T Consensus 55 LG~~v~~i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (328)
T 3kzh_A 55 VGVNTNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADMKSIGAMNTDFIDSKREIF 134 (328)
T ss_dssp TTCCEEEECEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHHHTHHHH
T ss_pred cCCCcEEEEEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEchhhhhhCCHHHHHHHHHhh
Confidence 999999999999999999999999999999998876655 799999999999999874 334555556665553 2457
Q ss_pred CCCcEEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCC--C
Q 018120 169 KGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEEN--A 246 (360)
Q Consensus 169 ~~~~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~--~ 246 (360)
..+++++++.. ++ +.+..+++ +++.+.++++|+++.. ..+.+.++++ ++|++++|++|+..|++.... +
T Consensus 135 ~~~~~~~~~~~-~~-~~~~~l~~-a~~~~~~v~~D~~~~~----~~~~~~~~l~--~~dil~~N~~E~~~l~g~~~~~~~ 205 (328)
T 3kzh_A 135 ENAEYTVLDSD-NP-EIMEYLLK-NFKDKTNFILDPVSAE----KASWVKHLIK--DFHTIKPNRHEAEILAGFPITDTD 205 (328)
T ss_dssp HTCSEEEEESS-CH-HHHHHHHH-HHTTTSEEEEECCSHH----HHHTSTTTGG--GCSEECCBHHHHHHHHTSCCCSHH
T ss_pred ccCCEEEEeCC-cH-HHHHHHHH-HhhcCCcEEEEeCCHH----HHHHHHHHhc--CCcEEeCCHHHHHHHHCCCCCCHH
Confidence 89999999843 23 77777777 8889999999998643 2344556777 899999999999999986422 2
Q ss_pred cHHHHH-HHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHHHHh
Q 018120 247 DSEAAL-EFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVGSCSG 325 (360)
Q Consensus 247 ~~~~~~-~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~~aa 325 (360)
+..++. .++..+++.|+||+|++|++++++++.+++|+++ ++++|||||||+|+|||++++++|+++++|+++|+++|
T Consensus 206 ~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~~A~a~a 284 (328)
T 3kzh_A 206 DLIKASNYFLGLGIKKVFISLDADGIFYNDGVSCGKIKATE-VDVKNVTGAGDSFVAGLGYGYMNKMPIEDIVKFAMTMS 284 (328)
T ss_dssp HHHHHHHHHHHHTCCEEEEECGGGCEEEECSSCEEEEEESS-CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCCCEEEEeCCceEEecCCC-cccCCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 333443 4555689999999999999999999999999984 78999999999999999999999999999999999999
Q ss_pred cchhcccCCccCcccHHHHHHHHHHcCC
Q 018120 326 GSVIRSLGGEVTPENWQWMRKQMQIRGL 353 (360)
Q Consensus 326 a~~v~~~G~~~~~~~~~~~~~~~~~~~~ 353 (360)
+.+|++.|+....++.++++++++....
T Consensus 285 a~~v~~~G~~~~~~~~~~v~~~~~~~~~ 312 (328)
T 3kzh_A 285 NITISHEETIHPDMALDTVLAKLEKTTW 312 (328)
T ss_dssp HHHHTSSSSSCTTCSHHHHHHHHHTCCE
T ss_pred HHHhcCCCCCCCcCCHHHHHHHhhhcch
Confidence 9999999999999999999999986543
No 17
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=100.00 E-value=1.9e-45 Score=346.88 Aligned_cols=315 Identities=23% Similarity=0.326 Sum_probs=253.8
Q ss_pred cccccCCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHH
Q 018120 9 NREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRG 88 (360)
Q Consensus 9 ~~~~~~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~ 88 (360)
....+++++|+|+| ++++|+++.++..++.+++...|+....+.+ ...+..+. +.......+||+++|+|++
T Consensus 26 ~~~~~~~~~vlviG-~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~-~~p~~~~~------~~~~~~~~~GG~~~NvA~~ 97 (383)
T 2abs_A 26 SNSATGPMRVFAIG-NPILDLVAEVPSSFLDEFFLKRGDATLATPE-QMRIYSTL------DQFNPTSLPGGSALNSVRV 97 (383)
T ss_dssp ----CCCCCEEEEC-CCEEEEEEECCHHHHHHTTCCTTCEEECCGG-GGGGGGTG------GGGCCEEEEESHHHHHHHH
T ss_pred ccCCCCCceEEEEC-cchheeEeccCHHHHHhcCCCCCceeechhh-HHHHHHhh------ccccceeeCCChHHHHHHH
Confidence 34455678999999 9999999999877888888888877654311 11111111 1124788999999999999
Q ss_pred HHhhc---CCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeecccccccCCCcccCCc
Q 018120 89 LSVGF---GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA 165 (360)
Q Consensus 89 la~~l---G~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~ 165 (360)
|++ | |.++.|+|.||+|.+|+++++.|++.||++.++...+.+|+.++++++ +|+|+++.+.+++..+++++...
T Consensus 98 la~-Lg~~g~~v~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~T~~~~~~~~-~g~r~~~~~~~a~~~l~~~~~~~ 175 (383)
T 2abs_A 98 VQK-LLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLIN-EKERTLCTHLGACGSFRLPEDWT 175 (383)
T ss_dssp HHH-HHCSTTSEEEEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEE-TTEEEEEEECGGGGGCCCCTTHH
T ss_pred HHH-hccCCCcEEEEEEecCChhHHHHHHHHHHcCCceeeeecCCCCCeEEEEEEc-CCceeEeeccChhhhCChhhhhH
Confidence 999 8 899999999999999999999999999999998754558999999997 78998877777776677664444
Q ss_pred cccCCCcEEEEe-e-cccCHHHHHHHHHHHHH-CCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcC
Q 018120 166 EDVKGSKWLVLR-F-GMFNFEVIQAAIRIAKQ-EGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRG 242 (360)
Q Consensus 166 ~~~~~~~~v~~~-~-~~~~~~~~~~~~~~a~~-~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~ 242 (360)
+.+.+++++|++ + ..++.+.+.++++.+++ .++++++|++.+...+.+++.+.++++ ++|++++|++|+..|++.
T Consensus 176 ~~l~~~~~v~~~g~~~~~~~~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~--~~dil~pN~~Ea~~L~g~ 253 (383)
T 2abs_A 176 TFASGALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLL--HTNILFGNEEEFAHLAKV 253 (383)
T ss_dssp HHTTTCCEEEEEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHH--TCSEEEEEHHHHHHHHHH
T ss_pred HHhhcCCEEEEeeecccCCHHHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHHh--hCCEEeCCHHHHHHHhcc
Confidence 568899999998 2 22567899999999999 899999999876544456677788888 899999999999999764
Q ss_pred CC--------------CCcHHHHHHHHHc--------CCCEEEEEeCCCceEEE-----ECCEEEEeCCcCCC---cccC
Q 018120 243 EE--------------NADSEAALEFLAK--------RCQWAVVTLGPNGCIAK-----HGKEIVKVPAIGEA---KAID 292 (360)
Q Consensus 243 ~~--------------~~~~~~~~~~l~~--------~~~~vivt~G~~G~~~~-----~~~~~~~~~~~~~~---~vvd 292 (360)
.. .++.+++.+.+.+ +++.||||+|++|++++ .+++.+++|+++ + +++|
T Consensus 254 ~~~~~~~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~-v~~~~vvD 332 (383)
T 2abs_A 254 HNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPV-VAAEKIVD 332 (383)
T ss_dssp HTCC----------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCC-CCGGGCCC
T ss_pred cCcccccccccccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCcc-CCcCCcCc
Confidence 21 1233444444432 78999999999999998 566778888873 4 8999
Q ss_pred CCCccHHhHHHHHHHHHcCCCHHHHHHHHHHHhcchhcccCCcc
Q 018120 293 ATGAGDLFASGFLYGLVKGLSLEECCKVGSCSGGSVIRSLGGEV 336 (360)
Q Consensus 293 ttGAGD~f~ag~~~~l~~~~~l~~a~~~a~~aaa~~v~~~G~~~ 336 (360)
||||||+|+|||+++|++|+++++|+++|+++|+.+|++.|+..
T Consensus 333 ttGAGDaF~ag~~~~l~~g~~l~~al~~A~a~aa~~v~~~Ga~~ 376 (383)
T 2abs_A 333 TNGAGDAFVGGFLYALSQGKTVKQCIMCGNACAQDVIQHVGFSL 376 (383)
T ss_dssp CTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSCCC
T ss_pred CCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCCccC
Confidence 99999999999999999999999999999999999999999874
No 18
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=100.00 E-value=1.8e-45 Score=340.96 Aligned_cols=295 Identities=20% Similarity=0.226 Sum_probs=233.9
Q ss_pred cCCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhh
Q 018120 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (360)
Q Consensus 13 ~~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~ 92 (360)
.++++|+++| +.++|++...+. .. .+.......+||++.|+|++|++
T Consensus 24 ~~~~~vlviG-~~~iD~~~~~~g-----------~~--------------------~~~~~~~~~~GG~~~NvA~~la~- 70 (336)
T 4du5_A 24 TSALDVITFG-EAMMLLVADRPG-----------PL--------------------EHAEAFHKRTAGAETNVAIGLAR- 70 (336)
T ss_dssp --CEEEEEEC-CCEEEEEESSSS-----------CG--------------------GGCCEEEEEEECHHHHHHHHHHH-
T ss_pred CCCCCEEEEC-hhhhhccCCCCC-----------cc--------------------chhhheeecCCCHHHHHHHHHHh-
Confidence 4557999999 999999987521 10 11225789999999999999999
Q ss_pred cCCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeee---cccccccCCCcccCCcccc
Q 018120 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMR---PCLSNAVKIQADELIAEDV 168 (360)
Q Consensus 93 lG~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~---~~~~~~~~~~~~~~~~~~~ 168 (360)
||.++.++|.+|+|.+|+.+++.|++.||+++++...++ +|+.+++.++++|+++.+ ...++...+++++++...+
T Consensus 71 LG~~~~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~~~l 150 (336)
T 4du5_A 71 LGLKVGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDEAWL 150 (336)
T ss_dssp TTCCEEEEEEECSSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCHHHH
T ss_pred CCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCHhHh
Confidence 999999999999999999999999999999999987665 899999998888855433 2346677888888888888
Q ss_pred CCCcEEEEee-cc-cC---HHHHHHHHHHHHHCCCeEEEeCCChhH----HHhhhHHHHHhhccCCccEEEcCHHHHHHh
Q 018120 169 KGSKWLVLRF-GM-FN---FEVIQAAIRIAKQEGLSVSMDLASFEM----VRNFRTPLLQLLESGDVDLCFANEDEAAEL 239 (360)
Q Consensus 169 ~~~~~v~~~~-~~-~~---~~~~~~~~~~a~~~~~~v~~d~~~~~~----~~~~~~~l~~~l~~~~~dil~~n~~E~~~l 239 (360)
+++++++++. .. ++ .+.+.++++.+++.+.++++||+.... ...+++.+.++++ ++|++++|++|+..|
T Consensus 151 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~--~~dil~pN~~Ea~~l 228 (336)
T 4du5_A 151 LSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLAT--RADWVLPGMEEGRFL 228 (336)
T ss_dssp TTEEEEEEESSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHT--TCSEECCBHHHHHHH
T ss_pred ccCCEEEEcCchhhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHH--hCCEEECCHHHHHHH
Confidence 9999999882 21 22 367788999999999999999973211 1234566777888 999999999999999
Q ss_pred hcCCCCCcHHHHH-HHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCc-ccCCCCccHHhHHHHHHHHHcCCCHHHH
Q 018120 240 VRGEENADSEAAL-EFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAK-AIDATGAGDLFASGFLYGLVKGLSLEEC 317 (360)
Q Consensus 240 ~~~~~~~~~~~~~-~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~-vvdttGAGD~f~ag~~~~l~~~~~l~~a 317 (360)
++.. +.+++. .+++.+.+.|+||+|++|++++++++.+++|+++ .+ ++||+||||+|+|||+++|++|+++++|
T Consensus 229 ~g~~---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~~vvdttGAGDaf~a~~~~~l~~g~~l~~a 304 (336)
T 4du5_A 229 TGET---TPEGVARFYRQLGAKLVVVKLGAEGAYFDGEAGSGRVAGFP-VAEVVDTVGAGDGFAVGVISALLDGLGVPEA 304 (336)
T ss_dssp HCCC---SHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCC-C-------CHHHHHHHHHHHHHHTTCCHHHH
T ss_pred hCCC---CHHHHHHHHHhcCCCEEEEEecCCceEEEECCeEEEeCCcc-CCCCCCCccchHHHHHHHHHHHHcCCCHHHH
Confidence 9853 555544 4555688999999999999999999999999995 65 9999999999999999999999999999
Q ss_pred HHHHHHHhcchhcccCCccCcccHHHHHH
Q 018120 318 CKVGSCSGGSVIRSLGGEVTPENWQWMRK 346 (360)
Q Consensus 318 ~~~a~~aaa~~v~~~G~~~~~~~~~~~~~ 346 (360)
+++|+++|+.+|++.|+..+.|+.+++++
T Consensus 305 ~~~A~~~aa~~v~~~G~~~~~p~~~ev~~ 333 (336)
T 4du5_A 305 VKRGAWIGARAVQVLGDSEGLPTRAELNA 333 (336)
T ss_dssp HHHHHHHHHHHHC------CCCCHHHHHC
T ss_pred HHHHHHHHHHHhccCCCccCCCCHHHHHh
Confidence 99999999999999999988999988875
No 19
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=100.00 E-value=5.7e-47 Score=349.92 Aligned_cols=301 Identities=22% Similarity=0.306 Sum_probs=224.3
Q ss_pred ccccCCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHH
Q 018120 10 REASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGL 89 (360)
Q Consensus 10 ~~~~~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~l 89 (360)
....++++|+++| +.++|++...+ +.|.. +.......+||++.|+|++|
T Consensus 16 ~~~~~~~~v~viG-~~~~D~~~~~~-----~~p~~-------------------------~~~~~~~~~GG~~~NvA~~l 64 (327)
T 3hj6_A 16 SLSKGDLDVVSLG-EILVDMISTEE-----VNSLS-------------------------QSREYTRHFGGSPANIAVNL 64 (327)
T ss_dssp ------CCEEEES-CCEEEEECCCC-----CSSGG-------------------------GCCEEEEEEECHHHHHHHHH
T ss_pred ccccCCCCEEEEc-cceEEEeccCC-----CCCcc-------------------------ccceeeeecCcHHHHHHHHH
Confidence 3445668999999 99999998874 33211 11247899999999999999
Q ss_pred HhhcCCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeecccccccCCCcccCCcccc
Q 018120 90 SVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDV 168 (360)
Q Consensus 90 a~~lG~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~ 168 (360)
++ ||.++.++|.+|+|.+|+++++.|++.||+++++...+. +|+.+++..+ +|+|++..+.++...++++++..+.+
T Consensus 65 a~-LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~-~g~~~~~~~~~a~~~~~~~~~~~~~~ 142 (327)
T 3hj6_A 65 SR-LGKKVALISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKS-TRTPDWLPYREADMYLQEDDIIFELI 142 (327)
T ss_dssp HH-TTCCEEEECEEESSHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCC-TTCCCEEEECSGGGGCCSCCCHHHHH
T ss_pred HH-cCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcccEEEcCCCCceEEEEEec-CCCccEEEecChhhhCChhhcCHhHh
Confidence 99 999999999999999999999999999999999986554 7888877665 68898887777777787777766778
Q ss_pred CCCcEEEEee-cc---cCHHHHHHHHHHHHHCCCeEEEeCCChhHH----HhhhHHHHHhhccCCccEEEcCHHHHHHhh
Q 018120 169 KGSKWLVLRF-GM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMV----RNFRTPLLQLLESGDVDLCFANEDEAAELV 240 (360)
Q Consensus 169 ~~~~~v~~~~-~~---~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~----~~~~~~l~~~l~~~~~dil~~n~~E~~~l~ 240 (360)
+++|++|++. .. .+.+.+.++++.++++|+++++|++..... ....+.+.++++ ++|++++|++|+..|+
T Consensus 143 ~~~~~v~~~g~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~ 220 (327)
T 3hj6_A 143 KRSKVFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIIS--RADFVKPSLDDARHLF 220 (327)
T ss_dssp C--CEEEEESHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHT--TCSEECCBHHHHHHHH
T ss_pred ccCCEEEECchHhcCchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHh--hCCEEecCHHHHHHHh
Confidence 9999999982 21 135788899999999999999999853211 123456777888 8999999999999999
Q ss_pred cCCCCCcHHH-HHHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHH
Q 018120 241 RGEENADSEA-ALEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCK 319 (360)
Q Consensus 241 ~~~~~~~~~~-~~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~ 319 (360)
+.. +.++ +..+++.+.+.|+||+|++|++++++++.+++|++ .++++|||||||+|+|||++++++|+++++|++
T Consensus 221 g~~---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~-~v~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~ 296 (327)
T 3hj6_A 221 GPD---SPENYVKRYLELGVKAVILTLGEEGVIASDGEEIIRIPAF-SEDAVDVTGAGDAFWSGFICGLLDGYTVKRSIK 296 (327)
T ss_dssp TTS---CSSGGGGGGTTTTCSEEEEECSTTCEEEECSSCEEESCSS-TTC-----CCHHHHHHHHHHTTSSCSTTHHHHH
T ss_pred CCC---CHHHHHHHHHhCCCCEEEEEECCCceEEEeCCeeEEcCCc-ccccCCCcChhHHHHHHHHHHHHcCCCHHHHHH
Confidence 863 2333 33444558899999999999999999999999999 488999999999999999999999999999999
Q ss_pred HHHHHhcchhcccCCccCcccHHHHHHHHH
Q 018120 320 VGSCSGGSVIRSLGGEVTPENWQWMRKQMQ 349 (360)
Q Consensus 320 ~a~~aaa~~v~~~G~~~~~~~~~~~~~~~~ 349 (360)
+|+++|+.+|++.|+..+.|+.++++++++
T Consensus 297 ~A~a~aa~~v~~~G~~~~~p~~~ev~~~l~ 326 (327)
T 3hj6_A 297 LGNGVAAFKIRGVGALSPVPSKEDIIKEYN 326 (327)
T ss_dssp HHHCCCSSCC--------------------
T ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHHHhc
Confidence 999999999999999989999999988875
No 20
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=100.00 E-value=1.5e-45 Score=339.31 Aligned_cols=299 Identities=18% Similarity=0.242 Sum_probs=246.2
Q ss_pred cCCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhh
Q 018120 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (360)
Q Consensus 13 ~~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~ 92 (360)
+++++|+++| +.++|++...+ ..++. +.......+||++.|+|++|++
T Consensus 6 ~~~~~v~~iG-~~~~D~~~~~~-----~~p~~-------------------------~~~~~~~~~GG~~~NvA~~la~- 53 (319)
T 3pl2_A 6 TSTHEVLAIG-RLGVDIYPLQS-----GVGLA-------------------------DVQSFGKYLGGSAANVSVAAAR- 53 (319)
T ss_dssp -CCCSEEEES-CCEEEECBSSS-----SCCGG-------------------------GCCCBCCEEECHHHHHHHHHHH-
T ss_pred ccCCCEEEEC-hhheeeecccC-----CCCcc-------------------------ccceeeecCCCcHHHHHHHHHH-
Confidence 5678999999 99999987753 23211 1125778999999999999999
Q ss_pred cCCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeecccc--c-ccCCCcccCCcccc
Q 018120 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLS--N-AVKIQADELIAEDV 168 (360)
Q Consensus 93 lG~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~~~~--~-~~~~~~~~~~~~~~ 168 (360)
||.++.++|.+|+|.+|+++++.|++.||+++++...++ +|+.+++.++++|++++..+.. + ...+++++++.+.+
T Consensus 54 LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~ 133 (319)
T 3pl2_A 54 HGHNSALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSLDDV 133 (319)
T ss_dssp TTCCEEEEEEEESSHHHHHHHHHHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCHHHH
T ss_pred CCCceEEEEEeCCCHHHHHHHHHHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCHHHh
Confidence 999999999999999999999999999999999986554 8999999888788887765532 3 45788888887788
Q ss_pred CCCcEEEEeeccc---C-HHHHHHHHHHHHHCCCeEEEeCCChhH----HHhhhHHHHHhhccCCccEEEcCHHHHHHhh
Q 018120 169 KGSKWLVLRFGMF---N-FEVIQAAIRIAKQEGLSVSMDLASFEM----VRNFRTPLLQLLESGDVDLCFANEDEAAELV 240 (360)
Q Consensus 169 ~~~~~v~~~~~~~---~-~~~~~~~~~~a~~~~~~v~~d~~~~~~----~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~ 240 (360)
++++++|+++... + .+.+..+++.+++ +.++++|++.... ...+++.+.++++ ++|++++|++|+..|+
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~ 210 (319)
T 3pl2_A 134 READILWFTLTGFSEEPSRGTHREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWALQ--HSTVAVGNKEECEIAV 210 (319)
T ss_dssp HHCSEEEEEGGGGSSTTHHHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHHT--TCSEEEECHHHHHHHH
T ss_pred ccCCEEEEecccccCchhHHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHHH--hCCEEEcCHHHHHHHc
Confidence 9999999993221 1 2455666666665 6678999963211 1234567778888 8999999999999999
Q ss_pred cCCCCCcHHHH-HHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHH
Q 018120 241 RGEENADSEAA-LEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCK 319 (360)
Q Consensus 241 ~~~~~~~~~~~-~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~ 319 (360)
+.. +++++ ..+++.+.+.|+||+|++|++++++++.+++|+++ ++++|||||||+|+|||++++++|+++++|++
T Consensus 211 g~~---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~ 286 (319)
T 3pl2_A 211 GET---EPERAGRALLERGVELAIVKQGPKGVMAMTKDETVEVPPFF-VDVINGLGAGDAFGGALCHGLLSEWPLEKVLR 286 (319)
T ss_dssp SCC---SHHHHHHHHHHTTCSEEEEEEETTEEEEECSSCEEEECCCC-CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CCC---CHHHHHHHHHhcCCCEEEEEECCCCeEEEECCceEEeCCcc-cCCCCCcCchHHHHHHHHHHHHcCCCHHHHHH
Confidence 853 45544 45566688999999999999999999999999995 78999999999999999999999999999999
Q ss_pred HHHHHhcchhcccCCccCcccHHHHHHHHHH
Q 018120 320 VGSCSGGSVIRSLGGEVTPENWQWMRKQMQI 350 (360)
Q Consensus 320 ~a~~aaa~~v~~~G~~~~~~~~~~~~~~~~~ 350 (360)
+|+++|+.++++.|+..+.|+.++++++++.
T Consensus 287 ~A~~~aa~~v~~~G~~~~~p~~~ev~~~l~~ 317 (319)
T 3pl2_A 287 FANTAGALVASRLECSTAMPTTDEVEASLNQ 317 (319)
T ss_dssp HHHHHHHHHHTSSCSGGGCCCHHHHHHHCC-
T ss_pred HHHHHHHHHHhccCCcCCCCCHHHHHHHHhc
Confidence 9999999999999998889999999998764
No 21
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=100.00 E-value=3.4e-45 Score=340.72 Aligned_cols=301 Identities=15% Similarity=0.137 Sum_probs=247.5
Q ss_pred CeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCC
Q 018120 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (360)
Q Consensus 16 ~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~ 95 (360)
.+|+++| +.++|++..-. + .+.+.......+||++.|+|++|++ ||.
T Consensus 3 ~~v~viG-~~~~D~~~~~~-----------~--------------------~~~~~~~~~~~~GG~~~NvA~~la~-LG~ 49 (346)
T 3ktn_A 3 LKIAAFG-EVMLRFTPPEY-----------L--------------------MLEQTEQLRMNFVGTGVNLLANLAH-FQL 49 (346)
T ss_dssp CEEEEEC-CCEEEEECSTT-----------C--------------------CTTTCSCCEEEEECHHHHHHHHHHH-TTC
T ss_pred CcEEEeC-hhhhhhcCCCC-----------C--------------------cccccceeEEeccCHHHHHHHHHHH-cCC
Confidence 5799999 99999885321 0 0112236889999999999999999 999
Q ss_pred ceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeecc----cccccCCCcccCC-ccccCC
Q 018120 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPC----LSNAVKIQADELI-AEDVKG 170 (360)
Q Consensus 96 ~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~----~~~~~~~~~~~~~-~~~~~~ 170 (360)
++.++|.||+|.+|+.+++.|++.||+++++...+.+|+.+++.++.+++++++.+ .++...+++++++ ...+++
T Consensus 50 ~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~ 129 (346)
T 3ktn_A 50 ETALITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAE 129 (346)
T ss_dssp EEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECCSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSCHHHHHTT
T ss_pred CeEEEEecCCCHHHHHHHHHHHHcCCcceEEEeCCCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcChHHHhCC
Confidence 99999999999999999999999999999998766689999988776566566554 3455678888887 456899
Q ss_pred CcEEEEeecc--cCH---HHHHHHHHHHHHCCCeEEEeCCChhH---H---HhhhHHHHHhhccCCccEEEcCHHHHHHh
Q 018120 171 SKWLVLRFGM--FNF---EVIQAAIRIAKQEGLSVSMDLASFEM---V---RNFRTPLLQLLESGDVDLCFANEDEAAEL 239 (360)
Q Consensus 171 ~~~v~~~~~~--~~~---~~~~~~~~~a~~~~~~v~~d~~~~~~---~---~~~~~~l~~~l~~~~~dil~~n~~E~~~l 239 (360)
+|++|+++.. .++ +.+.++++.++++|+++++||+.... . ..+++.+.++++ ++|++++|++|+..|
T Consensus 130 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~--~~dil~~N~~E~~~l 207 (346)
T 3ktn_A 130 VDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILP--YCDIVFGSRRDLVEL 207 (346)
T ss_dssp CSEEEECTHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGG--GCSEEECCHHHHHHT
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHH--hCCEEEccHHHHHHH
Confidence 9999998211 233 67889999999999999999963211 1 344577888888 899999999999999
Q ss_pred hcCC-CC-----CcHHHHHH-HHHc-CCCEEEEEeCCCc-------eEEEECCEEEEeCCcCCCcccCCCCccHHhHHHH
Q 018120 240 VRGE-EN-----ADSEAALE-FLAK-RCQWAVVTLGPNG-------CIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGF 304 (360)
Q Consensus 240 ~~~~-~~-----~~~~~~~~-~l~~-~~~~vivt~G~~G-------~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~ 304 (360)
++.. .. ++..++.+ ++.. +++.|+||+|++| ++++++++.+++|+++ ++++|||||||+|+|||
T Consensus 208 ~g~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~-v~vvdttGAGDaF~ag~ 286 (346)
T 3ktn_A 208 LGFIPREDLEGEAQETELIQRFMSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRP-LLNLDRIGAGDAYAAGI 286 (346)
T ss_dssp SCCCCCTTSCHHHHHHHHHHHHHHHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEE-CCCSCCTTHHHHHHHHH
T ss_pred hCCCCCccccchHHHHHHHHHHHHhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCc-cccCCCCchhHHHHHHH
Confidence 9865 21 13444444 4443 8999999999998 9999888899999995 78999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHhcchhcccCCccCcccHHHHHHHHHHcCC
Q 018120 305 LYGLVKGLSLEECCKVGSCSGGSVIRSLGGEVTPENWQWMRKQMQIRGL 353 (360)
Q Consensus 305 ~~~l~~~~~l~~a~~~a~~aaa~~v~~~G~~~~~~~~~~~~~~~~~~~~ 353 (360)
+++|++|+++++|+++|+++|+.+|++.|+.. .++.++++++++.++.
T Consensus 287 ~~~l~~g~~l~~a~~~A~a~aa~~v~~~G~~~-~p~~~ev~~~l~~~~~ 334 (346)
T 3ktn_A 287 LYGYSQNWSLEKAVTFATVNGVLAHTIQGDIP-LTTVKQVNHVLEHPNI 334 (346)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHTTSSSSCC-CCCHHHHHHHHHCTTC
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHhccCCCCC-CCCHHHHHHHHhcCCc
Confidence 99999999999999999999999999999886 8899999999985544
No 22
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=1.4e-44 Score=334.62 Aligned_cols=305 Identities=24% Similarity=0.294 Sum_probs=243.8
Q ss_pred cCCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhh
Q 018120 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (360)
Q Consensus 13 ~~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~ 92 (360)
.+.++|+++| +.++|++.... ..+.. ........+||++.|+|++|++
T Consensus 9 ~~~~~i~viG-~~~~D~~~~~~-----~~~~~-------------------------~~~~~~~~~GG~~~NvA~~la~- 56 (332)
T 2qcv_A 9 DREFDLIAIG-RACIDLNAVEY-----NRPME-------------------------ETMTFSKYVGGSPANIVIGSSK- 56 (332)
T ss_dssp CCSEEEEEES-CCEEEEEESSC-----SSCGG-------------------------GCCCEEEEEESHHHHHHHHHHH-
T ss_pred ccCCcEEEEC-cceEEEecCCC-----CCCcc-------------------------ccceeEecCCCHHHHHHHHHHH-
Confidence 4557899999 99999998752 12100 0124789999999999999999
Q ss_pred cCCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecC--CCCeeEEEEEcCCCceeeeccc--ccccCCCcccCCcccc
Q 018120 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR--GPTGQCVCLVDASGNRTMRPCL--SNAVKIQADELIAEDV 168 (360)
Q Consensus 93 lG~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~--~~t~~~~~~~~~~g~r~~~~~~--~~~~~~~~~~~~~~~~ 168 (360)
||.++.++|.+|+|.+|+++++.|++.||+++++...+ .+|+.+++.++.+|++.+..+. ++...+++++++...+
T Consensus 57 LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~ 136 (332)
T 2qcv_A 57 LGLKAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYI 136 (332)
T ss_dssp TTCCEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCHHHH
T ss_pred cCCceEEEEEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCHHHH
Confidence 99999999999999999999999999999999997764 3799888887766777664433 3455777888877678
Q ss_pred CCCcEEEEeecc---c-CHHHHHHHHHHHHHCCCeEEEeCCChhH----HHhhhHHHHHhhccCCccEEEcCHHHHHHhh
Q 018120 169 KGSKWLVLRFGM---F-NFEVIQAAIRIAKQEGLSVSMDLASFEM----VRNFRTPLLQLLESGDVDLCFANEDEAAELV 240 (360)
Q Consensus 169 ~~~~~v~~~~~~---~-~~~~~~~~~~~a~~~~~~v~~d~~~~~~----~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~ 240 (360)
++++++|+++.. . +.+.+.++++.+++++.++++||+.... ...+++.+.++++ ++|++++|++|+..|+
T Consensus 137 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~--~~dil~~N~~E~~~l~ 214 (332)
T 2qcv_A 137 RRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAE--QSDIVIGTREEFDVLE 214 (332)
T ss_dssp TTEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHH--HCSEEEEEHHHHHHHT
T ss_pred ccCCEEEEeCccccCchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHH--hCCEEEccHHHHHHHh
Confidence 899999998321 1 2478889999999999999999975211 1123345666777 8999999999999999
Q ss_pred cCCCCCcHH-HHHHHHHcCCCEEEEEeCCCceEEEEC-CEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHH
Q 018120 241 RGEENADSE-AALEFLAKRCQWAVVTLGPNGCIAKHG-KEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECC 318 (360)
Q Consensus 241 ~~~~~~~~~-~~~~~l~~~~~~vivt~G~~G~~~~~~-~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~ 318 (360)
+....++.. .+.++++.+++.|+||+|++|++++++ ++.+++|+++ ++++||+||||+|+|||++++++|+++++|+
T Consensus 215 g~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~-v~vvdt~GAGDaf~a~~~~~l~~g~~~~~a~ 293 (332)
T 2qcv_A 215 NRTEKGDNDETIRYLFKHSPELIVIKHGVEGSFAYTKAGEAYRGYAYK-TKVLKTFGAGDSYASAFLYALISGKGIETAL 293 (332)
T ss_dssp TCSSCCCHHHHHHHHTTSSCSEEEEECGGGCEEEEETTSCEEEECCBC-CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred CCCcCCCHHHHHHHHHHcCCCEEEEEECCcceEEEecCCceEEcCCCC-ccccCCCCcHHHHHHHHHHHHHcCCCHHHHH
Confidence 864223344 445555668899999999999999988 6788999984 7899999999999999999999999999999
Q ss_pred HHHHHHhcchhcccCCccCcccHHHHHHHHHHcC
Q 018120 319 KVGSCSGGSVIRSLGGEVTPENWQWMRKQMQIRG 352 (360)
Q Consensus 319 ~~a~~aaa~~v~~~G~~~~~~~~~~~~~~~~~~~ 352 (360)
++|+++|+.++++.|+....++.++++++++...
T Consensus 294 ~~A~~~aa~~v~~~G~~~~~p~~~ev~~~l~~~~ 327 (332)
T 2qcv_A 294 KYGSASASIVVSKHSSSDAMPSVEEIEALIEKDE 327 (332)
T ss_dssp HHHHHHHHHHHHC-----CCCCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHccCCCccCCCCHHHHHHHHhcCC
Confidence 9999999999999999888899999999988654
No 23
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.2e-44 Score=332.92 Aligned_cols=296 Identities=22% Similarity=0.250 Sum_probs=240.3
Q ss_pred CCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcC
Q 018120 15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG 94 (360)
Q Consensus 15 ~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG 94 (360)
+++|+++| ++++|++..++ +.+. .+.... ......+||++.|+|++|++ ||
T Consensus 3 m~~i~viG-~~~~D~~~~~~-----~~~~-~~~~~~---------------------~~~~~~~GG~~~NvA~~la~-LG 53 (317)
T 2nwh_A 3 MKKILVLG-GAHIDRRGMIE-----TETA-PGASNP---------------------GSWMEEAGGGGFNAARNLSR-LG 53 (317)
T ss_dssp CCEEEEES-CCEEEEEEEES-----SSCC-TTSCCC---------------------EEEEEEEECHHHHHHHHHHH-TT
T ss_pred CCeEEEEC-chheEEeeccC-----CCCC-CCCCce---------------------EeEEEeCCcHHHHHHHHHHh-cC
Confidence 46899999 99999999985 2322 221111 12578999999999999999 99
Q ss_pred CceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeeccc-ccccCCCcccCCc----cccC
Q 018120 95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL-SNAVKIQADELIA----EDVK 169 (360)
Q Consensus 95 ~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~-~~~~~~~~~~~~~----~~~~ 169 (360)
.++.++|.+|+|.+|+++++.|++.||+++++...+.+|+.++++++++|+|++..+. +.+..++++.+.. +.+.
T Consensus 54 ~~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (317)
T 2nwh_A 54 FEVRIIAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADMDLYKLFTPRRLKVRAVREAII 133 (317)
T ss_dssp CEEEEECEEESSHHHHHHHHHHHHTTCEECCEEETTSCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHTSHHHHHHHH
T ss_pred CCcEEEEeecCCchHHHHHHHHHHcCCCCCCcccCCCCCceEEEEEcCCCCEEEEEcchHHHhhCCHHHhhhhhhhhHhc
Confidence 9999999999999999999999999999999544445899999999988999875443 3345566665542 4577
Q ss_pred CCcEEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCCCcH-
Q 018120 170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEENADS- 248 (360)
Q Consensus 170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~~~~- 248 (360)
.+++++++. .++.+.+..+++.+++.+.++++||++... .+.+.++++ ++|++++|++|+..|++.. .++.
T Consensus 134 ~~~~v~~~~-~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~----~~~~~~ll~--~~dil~~N~~E~~~l~g~~-~~~~~ 205 (317)
T 2nwh_A 134 ASDFLLCDA-NLPEDTLTALGLIARACEKPLAAIAISPAK----AVKLKAALG--DIDILFMNEAEARALTGET-AENVR 205 (317)
T ss_dssp HCSEEEEET-TSCHHHHHHHHHHHHHTTCCEEEECCSHHH----HGGGTTTGG--GCSEEEEEHHHHHHHHC------CT
T ss_pred cCCEEEEeC-CCCHHHHHHHHHHHHhcCCeEEEeCCCHHH----HHHHHHHhh--hCeEecCCHHHHHHHhCCC-hhHHH
Confidence 899999983 347889999999999999999999986432 234556777 8999999999999999852 1222
Q ss_pred HHHHHHHHcCCCEEEEEeCCCceEEEECC-EEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHHHHhcc
Q 018120 249 EAALEFLAKRCQWAVVTLGPNGCIAKHGK-EIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVGSCSGGS 327 (360)
Q Consensus 249 ~~~~~~l~~~~~~vivt~G~~G~~~~~~~-~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~~aaa~ 327 (360)
+.+..++..+++.|+||+|++|+++++++ ..+++|+++ ++++|||||||+|+|||++++++|+++++|+++|+++|+.
T Consensus 206 ~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~-v~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~ 284 (317)
T 2nwh_A 206 DWPNILRKAGLSGGVVTRGASEVVAFNGTEKAILHPPLI-REVKDVTGAGDAMASGYLAAIAEGKTIREALRQGAAAAAI 284 (317)
T ss_dssp THHHHHHHTTCCCEEEEETTTEEEEECSSCEEEECCCCS-SSCSCCCCSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEECCCcEEEEcCCCceEEeCCCC-ccccCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 33445566688999999999999998866 468899984 7899999999999999999999999999999999999999
Q ss_pred hhcccCCccCcccHHHHHHHH
Q 018120 328 VIRSLGGEVTPENWQWMRKQM 348 (360)
Q Consensus 328 ~v~~~G~~~~~~~~~~~~~~~ 348 (360)
++++.|+....++.+++++..
T Consensus 285 ~v~~~G~~~~~~~~~~v~~~~ 305 (317)
T 2nwh_A 285 TVQSSFATSQDLSKDSVEAML 305 (317)
T ss_dssp HHSSTTCCGGGCCHHHHHHHH
T ss_pred HHcCCCCCCCCCCHHHHHhHh
Confidence 999999998788888887743
No 24
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=1.9e-44 Score=330.70 Aligned_cols=290 Identities=22% Similarity=0.308 Sum_probs=241.7
Q ss_pred CeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCC
Q 018120 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (360)
Q Consensus 16 ~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~ 95 (360)
.+|+|+| ++++|+++.++ ++|.+ |+... .......+||+++|+|++|++ ||.
T Consensus 15 ~~v~vvG-~~~iD~~~~~~-----~~p~~-g~~~~--------------------~~~~~~~~GG~~~NvA~~la~-LG~ 66 (311)
T 1vm7_A 15 LVISVVG-SSNIDIVLKVD-----HFTKP-GETQK--------------------AIEMNVFPGGKGANQAVTVAK-IGE 66 (311)
T ss_dssp CCEEEEC-CCEEEEEEECS-----SCCCT-TCEEE--------------------CSEEEEEEECHHHHHHHHHHH-HHS
T ss_pred CCEEEEC-cceeeEEEecc-----cCCCC-CceEe--------------------cCeeeecCCCHHHHHHHHHHH-cCC
Confidence 6799999 99999999985 56533 32221 124778999999999999999 999
Q ss_pred c-eEEEEeecCChhHHHHHHHHHhCCCeeceeeec-CCCCeeEEEEEcCCCceeeecccccccCCCcccCCccccCCCcE
Q 018120 96 P-CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMK-RGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKW 173 (360)
Q Consensus 96 ~-v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~-~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (360)
+ +.++|.+|+|.+|+.+++.|++.|| ++... +.+|+.++++++++|+|++..+.++...+++++++.+.++++++
T Consensus 67 ~~~~~i~~vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~~~~~~~~~~~~~~~ 143 (311)
T 1vm7_A 67 KGCRFVTCIGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELIDWNTLSESDI 143 (311)
T ss_dssp SCEEEEEEECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCCHHHHTTCSE
T ss_pred CceEEEEEECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEecCccccCCHHHhChhhcccCCE
Confidence 9 9999999999999999999999999 56554 45899999999988999998887877788888877666889999
Q ss_pred EEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCC--CCCcHHHH
Q 018120 174 LVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGE--ENADSEAA 251 (360)
Q Consensus 174 v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~--~~~~~~~~ 251 (360)
++++.. .+.+.+..+ +++.+.++++||+.. .+.+.++++ ++|++++|++|+..|++.. +.++..++
T Consensus 144 v~~~~~-~~~~~~~~~---a~~~~~~v~~Dp~~~------~~~~~~ll~--~~dil~~N~~E~~~l~g~~~~~~~~~~~~ 211 (311)
T 1vm7_A 144 LLLQNE-IPFETTLEC---AKRFNGIVIFDPAPA------QGINEEIFQ--YLDYLTPNEKEIEALSKDFFGEFLTVEKA 211 (311)
T ss_dssp EEECSS-SCHHHHHHH---HHHCCSEEEECCCSC------TTCCGGGGG--GCSEECCBHHHHHHHHHHHHSCCCCHHHH
T ss_pred EEEeCC-CCHHHHHHH---HHHcCCEEEEeCcch------hhhhHHHHh--hCCEEeCCHHHHHHHhCCCCCChhHHHHH
Confidence 999832 344444333 788899999999752 122345677 8999999999999998742 12345444
Q ss_pred -HHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHHHHhcchhc
Q 018120 252 -LEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVGSCSGGSVIR 330 (360)
Q Consensus 252 -~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~~aaa~~v~ 330 (360)
.++++.+.+.|+||+|++|++++++++.+++|+++ ++++||+||||+|.|||++++++|+++++|+++|+++|+.+++
T Consensus 212 ~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~-v~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~ 290 (311)
T 1vm7_A 212 AEKFLELGVKNVIVKLGDKGVLLVNKNEKKHFPTFK-VKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVT 290 (311)
T ss_dssp HHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCC-CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCEEEEEECCCCeEEEeCCceEEecCCC-cccCCCCccHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhC
Confidence 45556688999999999999999999889999984 7899999999999999999999999999999999999999999
Q ss_pred ccCCccCcccHHHHHHHHH
Q 018120 331 SLGGEVTPENWQWMRKQMQ 349 (360)
Q Consensus 331 ~~G~~~~~~~~~~~~~~~~ 349 (360)
+.|+....|+.++++++++
T Consensus 291 ~~G~~~~~p~~~ev~~~l~ 309 (311)
T 1vm7_A 291 RLGAQSSIPAREEVEAFLK 309 (311)
T ss_dssp SSSSGGGCCCHHHHHHHHH
T ss_pred cCCccccCCCHHHHHHHHh
Confidence 9999888889999988875
No 25
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=100.00 E-value=1.2e-44 Score=331.82 Aligned_cols=291 Identities=26% Similarity=0.319 Sum_probs=239.4
Q ss_pred eEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCCc
Q 018120 17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP 96 (360)
Q Consensus 17 ~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~~ 96 (360)
+|+++| ++++|++...+ +.. .+.......+||++.|+|.+|++ ||.+
T Consensus 3 ~i~viG-~~~~D~~~~~~-----------~~~--------------------~~~~~~~~~~GG~~~NvA~~la~-LG~~ 49 (309)
T 1v1a_A 3 EVVTAG-EPLVALVPQEP-----------GHL--------------------RGKRLLEVYVGGAEVNVAVALAR-LGVK 49 (309)
T ss_dssp SEEEES-CCEEEEECSSS-----------SCG--------------------GGCCEEEEEEECHHHHHHHHHHH-HTCC
T ss_pred cEEEEc-cceEEEecCCC-----------Ccc--------------------cchheeeeecCcHHHHHHHHHHH-cCCC
Confidence 699999 99999986321 100 01124678999999999999999 9999
Q ss_pred eEEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeeccc--ccccCCCcccCCccccCCCcEE
Q 018120 97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL--SNAVKIQADELIAEDVKGSKWL 174 (360)
Q Consensus 97 v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~v 174 (360)
+.++|.+|+|.+|+++++.|++.||+++++...+++|+.+++.++++|+|++..+. ++...+++++++...+++++++
T Consensus 50 ~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v 129 (309)
T 1v1a_A 50 VGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFL 129 (309)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHTCBCTTEEECSSCCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSEE
T ss_pred eEEEEEeCCCHHHHHHHHHHHHcCCCCceEEEcCCCCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCChhHhcCCCEE
Confidence 99999999999999999999999999999886545999999988888888875443 4556778888877778999999
Q ss_pred EEe-ecc----cCHHHHHHHHHHHHHCCCeEEEeCCChh---HHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCCC
Q 018120 175 VLR-FGM----FNFEVIQAAIRIAKQEGLSVSMDLASFE---MVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEENA 246 (360)
Q Consensus 175 ~~~-~~~----~~~~~~~~~~~~a~~~~~~v~~d~~~~~---~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~~ 246 (360)
|++ +.. .+.+.+.++++.++++++++++|++... ....+++.+.++++ ++|++++|++|+..|++..
T Consensus 130 ~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~g~~--- 204 (309)
T 1v1a_A 130 HLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALP--GVDLLFLSEEEAELLFGRV--- 204 (309)
T ss_dssp EEETTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTSCHHHHHHHHHHHGG--GCSEEEEEHHHHHHHHSSH---
T ss_pred EEeCchhccCchHHHHHHHHHHHHHHcCCEEEEeCCCCcccCCHHHHHHHHHHHHH--hCCEEECcHHHHHHHhCCH---
Confidence 998 322 1246788899999999999999997521 11234466777888 8999999999999999742
Q ss_pred cHHHHHHHHHcCCCEEEEEeCCCceEEEEC-CEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHHHHh
Q 018120 247 DSEAALEFLAKRCQWAVVTLGPNGCIAKHG-KEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVGSCSG 325 (360)
Q Consensus 247 ~~~~~~~~l~~~~~~vivt~G~~G~~~~~~-~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~~aa 325 (360)
+++.+ +.+++.|+||+|++|+++ ++ ++.+++|+++ ++++|||||||+|+|||++++++|+++++|+++|+++|
T Consensus 205 --~~~~~--~~g~~~vvvt~G~~G~~~-~~~~~~~~~~~~~-v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~a~~~a 278 (309)
T 1v1a_A 205 --EEALR--ALSAPEVVLKRGAKGAWA-FVDGRRVEGSAFA-VEAVDPVGAGDAFAAGYLAGAVWGLPVEERLRLANLLG 278 (309)
T ss_dssp --HHHHH--HTCCSEEEEECGGGCEEE-EETTEEEECCCCC-CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred --HHHHH--hcCCCEEEEEecCCCeeE-ecCCcEEEeCCCC-CCcCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 33443 568899999999999998 65 7788999984 78999999999999999999999999999999999999
Q ss_pred cchhcccCCccCcccHHHHHHHHHHc
Q 018120 326 GSVIRSLGGEVTPENWQWMRKQMQIR 351 (360)
Q Consensus 326 a~~v~~~G~~~~~~~~~~~~~~~~~~ 351 (360)
+.++++.|+....++.++++++++.+
T Consensus 279 a~~v~~~G~~~~~~~~~~v~~~~~~~ 304 (309)
T 1v1a_A 279 ASVAASRGDHEGAPYREDLEVLLKAT 304 (309)
T ss_dssp HHHHTSSTTTTTCCCHHHHTTCC---
T ss_pred HHHHcCCCCCcCCCCHHHHHHHHhhc
Confidence 99999999987788888888776544
No 26
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=100.00 E-value=2.1e-44 Score=331.80 Aligned_cols=294 Identities=20% Similarity=0.249 Sum_probs=241.4
Q ss_pred EEEecCCeeEEE-EeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCCc
Q 018120 18 ILGLQPAALIDH-VARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP 96 (360)
Q Consensus 18 i~~iG~~~~lD~-i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~~ 96 (360)
|++++.||.+|+ ++.++ ++ ..|+... .......+||++.|+|.+|++ ||.+
T Consensus 4 i~tvt~np~iD~~~~~v~-----~~--~~g~~~~--------------------~~~~~~~~GG~~~NvA~~la~-LG~~ 55 (320)
T 3ie7_A 4 IYTITLNPAIDRLLFIRG-----EL--EKRKTNR--------------------VIKTEFDCGGKGLHVSGVLSK-FGIK 55 (320)
T ss_dssp EEEEESSCEEEEEEEESS-----SC--CTTSCCC--------------------CSEEEEEEESHHHHHHHHHHH-HTCC
T ss_pred EEEEecchHHeeeEEEcC-----Cc--cCCCeeE--------------------eceeeecCCchHHHHHHHHHH-cCCC
Confidence 566655999999 99995 44 3443332 235889999999999999999 9999
Q ss_pred eEEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCc--eeeecccccccCCCcccCCc------ccc
Q 018120 97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGN--RTMRPCLSNAVKIQADELIA------EDV 168 (360)
Q Consensus 97 v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~--r~~~~~~~~~~~~~~~~~~~------~~~ 168 (360)
+.++|.+|+| +|+.+++.|++.||+++++...+++|+.++++++ +|+ |+++...+ ..+++++++. +.+
T Consensus 56 ~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~-~g~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~ 131 (320)
T 3ie7_A 56 NEALGIAGSD-NLDKLYAILKEKHINHDFLVEAGTSTRECFVVLS-DDTNGSTMIPEAG--FTVSQTNKDNLLKQIAKKV 131 (320)
T ss_dssp EEEEEEEEST-THHHHHHHHHHTTCCBCCEEETTCCCEEEEEEEE-TTCSCCEEEECCC--CCCCHHHHHHHHHHHHHHC
T ss_pred eEEEEEecCc-hHHHHHHHHHHcCCceEEEEecCCCCceEEEEEE-CCCceeEEEeCCC--CCCCHHHHHHHHHHHHHHh
Confidence 9999999998 9999999999999999999444558999999998 788 88765544 3556555542 457
Q ss_pred CCCcEEEEeec---ccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCC
Q 018120 169 KGSKWLVLRFG---MFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEEN 245 (360)
Q Consensus 169 ~~~~~v~~~~~---~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~ 245 (360)
+++|++++++. ..+.+.+.++++.+++.|+++++||+. +.+++.+.. ++|++++|++|+..|++....
T Consensus 132 ~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~l~~~l~~-~~dil~~N~~E~~~l~g~~~~ 202 (320)
T 3ie7_A 132 KKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSG--------EYLNLAVEM-GVDFIKPNEDEVIAILDEKTN 202 (320)
T ss_dssp CTTCEEEEESCCCTTCCHHHHHHHHHHHHHHTCEEEEECCH--------HHHHHHHHH-CCSEECCBTTGGGGGSCTTCC
T ss_pred cCCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCEEEEECCh--------HHHHHHHhc-CCeEEeeCHHHHHHHhCCCcC
Confidence 89999999721 234688999999999999999999963 234444432 799999999999999986532
Q ss_pred CcHHHHHHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHHHHh
Q 018120 246 ADSEAALEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVGSCSG 325 (360)
Q Consensus 246 ~~~~~~~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~~aa 325 (360)
.+.+.+.++++. .+.|+||+|++|++++++++.+++|+++ ++++|||||||+|+|||++++++|+++++|+++|+++|
T Consensus 203 ~~~~~~~~~~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~vvdttGAGDaF~ag~~~~l~~g~~~~~a~~~A~a~a 280 (320)
T 3ie7_A 203 SLEENIRTLAEK-IPYLVVSLGAKGSICAHNGKLYQVIPPK-VQERNDTGAGDVFVGAFIAGLAMNMPITETLKVATGCS 280 (320)
T ss_dssp CHHHHHHHHTTT-CSEEEEECGGGCEEEEETTEEEEEECCC-CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhh-CCEEEEEcCCCceEEEeCCcEEEEeCCc-cCCCCCcCchHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 245555555555 8999999999999999999999999994 78999999999999999999999999999999999999
Q ss_pred cchhcccCCccCcccHHHHHHHHHHcCCCCC
Q 018120 326 GSVIRSLGGEVTPENWQWMRKQMQIRGLPIP 356 (360)
Q Consensus 326 a~~v~~~G~~~~~~~~~~~~~~~~~~~~~~~ 356 (360)
+.+|++.|+ ..++.++++++++...+..-
T Consensus 281 a~~v~~~G~--~~~~~~ev~~~~~~~~i~~~ 309 (320)
T 3ie7_A 281 ASKVMQQDS--SSFDLEAAGKLKNQVSIIQL 309 (320)
T ss_dssp HHHHTSSSS--SCCCHHHHHHHGGGCEEEEC
T ss_pred HHHHhCcCC--CCCCHHHHHHHhhCeEEEEc
Confidence 999999994 57888999998887665533
No 27
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=100.00 E-value=7.5e-44 Score=328.73 Aligned_cols=303 Identities=17% Similarity=0.217 Sum_probs=240.5
Q ss_pred eEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCCc
Q 018120 17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP 96 (360)
Q Consensus 17 ~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~~ 96 (360)
+|+++| ++++|+++.+++.+++.+-. ++..... .. .........+||++.|+|++|++ ||.+
T Consensus 2 ~i~v~G-~~~iD~~~~~~~~~~~~~~~--~~~p~~~--------~~------~~~~~~~~~~GG~~~NvA~~la~-LG~~ 63 (326)
T 3b1n_A 2 ATLICG-SIAYDNIMTFEGRFREHILP--DQVHLIN--------LS------FLVPTMRREFGGCAGNIAYALNL-LGGD 63 (326)
T ss_dssp CEEEES-CCEEEEEEECSSCGGGGCCT--TSSSSCE--------EE------EECCSCCCEEECHHHHHHHHHHH-TTCC
T ss_pred cEEEEC-cceEEEEEecchhhhhhccc--cccCCCC--------cc------eecccceeccCCHHHHHHHHHHH-cCCC
Confidence 599999 99999999985555544321 1000000 00 00124677899999999999999 9999
Q ss_pred eEEEEeecC-ChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeecccccccCCCcccCCccccCCCcEE
Q 018120 97 CGLIGAYGD-DQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWL 174 (360)
Q Consensus 97 v~~ig~vG~-D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~v 174 (360)
+.++|.+|+ | +|+ +++.|++.||+++++...+. +|+.++++++++|+|.+..+.++...++++++... .+++++
T Consensus 64 ~~~i~~vG~~D-~g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~~~~~~~~~~--~~~~~v 139 (326)
T 3b1n_A 64 ARMMGTLGAVD-AQP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPGAMMQSHVNHAGEA--KDIKLA 139 (326)
T ss_dssp EEEEEEEETTT-CHH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEECGGGGGGGGSCGGGC--CSCSEE
T ss_pred eeEEEEECCcC-HHH-HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEecChhhhcChhhcccc--cCCCEE
Confidence 999999999 9 899 99999999999999887654 79999999998888887666666555555554332 789999
Q ss_pred EEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCCCcHHHHHHH
Q 018120 175 VLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEENADSEAALEF 254 (360)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 254 (360)
+++.. .++.+.++++.+++.+.++++|++..... ...+.+.++++ ++|++++|++|+..|++.... +.++ +
T Consensus 140 ~~~~~--~~~~~~~~~~~a~~~g~~v~~D~~~~~~~-~~~~~~~~~l~--~~dil~~N~~Ea~~l~g~~~~-~~~~---l 210 (326)
T 3b1n_A 140 IVGPD--GFQGMVQHTEELAQAGVPFIFDPGQGLPL-FDGATLRRSIE--LATYIAVNDYEAKLVCDKTGW-SEDE---I 210 (326)
T ss_dssp EECSC--CHHHHHHHHHHHHHHTCCEEECCGGGGGG-CCHHHHHHHHH--HCSEEEEEHHHHHHHHHHHCC-CHHH---H
T ss_pred EECCc--cHHHHHHHHHHHHHCCCEEEEeCchhhhh-ccHHHHHHHHH--hCCEEecCHHHHHHHhCCCCC-CHHH---H
Confidence 99832 36788899999999999999999753210 01345667787 899999999999999874321 2222 2
Q ss_pred HHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHHHHhcchhcccCC
Q 018120 255 LAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVGSCSGGSVIRSLGG 334 (360)
Q Consensus 255 l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~~aaa~~v~~~G~ 334 (360)
+ ++.+.|+||+|++|++++++++.+++|+++...++|||||||+|+|||++++++|+++++|+++|+++|+.++++.|+
T Consensus 211 ~-~~~~~vvvT~G~~Ga~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~~g~~~~~a~~~A~~~aa~~v~~~G~ 289 (326)
T 3b1n_A 211 A-SRVQALIITRGEHGATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIEHGFDWATAGRLASLMGALKIAHQGP 289 (326)
T ss_dssp H-TTSSEEEEECGGGCEEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSST
T ss_pred H-hcCCEEEEecCCCceEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCC
Confidence 3 348899999999999999999999999985334789999999999999999999999999999999999999999999
Q ss_pred ccCcccHHHHHHHHHHc
Q 018120 335 EVTPENWQWMRKQMQIR 351 (360)
Q Consensus 335 ~~~~~~~~~~~~~~~~~ 351 (360)
....++.++++++++..
T Consensus 290 ~~~~~~~~ev~~~l~~~ 306 (326)
T 3b1n_A 290 QTYAPTRAEIDARFETA 306 (326)
T ss_dssp TCCCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHh
Confidence 88889999999988753
No 28
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=100.00 E-value=6e-45 Score=336.90 Aligned_cols=295 Identities=21% Similarity=0.307 Sum_probs=242.8
Q ss_pred CCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhc
Q 018120 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (360)
Q Consensus 14 ~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~l 93 (360)
++.+|+++| ++++|+++.++ ++|.+ |... +.......+||+++|+|++|++ |
T Consensus 23 ~~~~vlviG-~~~iD~~~~~~-----~~p~~-g~~~--------------------~~~~~~~~~GG~~~NvA~~la~-L 74 (331)
T 2fv7_A 23 EVAAVVVVG-SCMTDLVSLTS-----RLPKT-GETI--------------------HGHKFFIGFGGKGANQCVQAAR-L 74 (331)
T ss_dssp -CCSEEEEC-CCEEEEEEECS-----SCCCT-TCCC--------------------CCSEEEEEEECHHHHHHHHHHH-T
T ss_pred ccCCEEEEC-cccEEEEEecC-----CCCCC-CceE--------------------ecCceEECcCCHHHHHHHHHHH-C
Confidence 346899999 99999999985 45422 2111 1224778999999999999999 9
Q ss_pred CCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeecccccccCCCcccCCc--cccCC
Q 018120 94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--EDVKG 170 (360)
Q Consensus 94 G~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~--~~~~~ 170 (360)
|.++.++|.+|+|.+|+++++.|++.||+++++...++ +|+.++++++++|+|+++.+.+++..+++++++. +.+++
T Consensus 75 G~~~~~i~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~l~~~~~~~~~~~l~~ 154 (331)
T 2fv7_A 75 GAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRAAANVISR 154 (331)
T ss_dssp TCCEEEEEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHHTHHHHHH
T ss_pred CCCeEEEEEECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecCCccccCCHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999887554 8999999999889999888777776777776643 34678
Q ss_pred CcEEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCC--CcH
Q 018120 171 SKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEEN--ADS 248 (360)
Q Consensus 171 ~~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~--~~~ 248 (360)
++++++++ ..+.+.+..+++.+++.++++++||+... ..+. .++++ ++|++++|++|+..|++.... ++.
T Consensus 155 ~~~v~~~~-~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~--~~~~---~~ll~--~~dil~~N~~Ea~~l~g~~~~~~~~~ 226 (331)
T 2fv7_A 155 AKVMVCQL-EITPATSLEALTMARRSGVKTLFNPAPAI--ADLD---PQFYT--LSDVFCCNESEAEILTGLTVGSAADA 226 (331)
T ss_dssp CSEEEECS-SSCHHHHHHHHHHHHHTTCEEEECCCSCC--TTCC---THHHH--TCSEEEEEHHHHHHHHSSCCCSHHHH
T ss_pred CCEEEEec-CCCHHHHHHHHHHHHHcCCEEEEeCCccc--ccch---HHHHh--cCCEEEeCHHHHHHHhCCCCCChhHH
Confidence 99999983 34678889999999999999999997531 1122 24556 899999999999999985421 233
Q ss_pred HHH-HHHHHcCCCEEEEEeCCCceEEEECC--EEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcC--CCHHHHHHHHHH
Q 018120 249 EAA-LEFLAKRCQWAVVTLGPNGCIAKHGK--EIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKG--LSLEECCKVGSC 323 (360)
Q Consensus 249 ~~~-~~~l~~~~~~vivt~G~~G~~~~~~~--~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~--~~l~~a~~~a~~ 323 (360)
.++ .++++.+++.|+||+|++|+++++++ +.+++|+++ ++++|||||||+|.|||++++++| +++++|+++|++
T Consensus 227 ~~~~~~l~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~-v~vvdttGAGDaf~a~~~~~l~~g~~~~~~~a~~~A~~ 305 (331)
T 2fv7_A 227 GEAALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEK-VKAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNF 305 (331)
T ss_dssp HHHHHHHHTTTCSEEEEECGGGCEEEEESSCCSCEEECCCC-CCCSCCTTHHHHHHHHHHHHHHHCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEECCCceEEEECCCCceeEecCCC-CccCCCCCchHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 333 44555688999999999999999887 788999984 789999999999999999999999 999999999999
Q ss_pred HhcchhcccCCccCcccHHHHH
Q 018120 324 SGGSVIRSLGGEVTPENWQWMR 345 (360)
Q Consensus 324 aaa~~v~~~G~~~~~~~~~~~~ 345 (360)
+|+.+|++.|+....|+.++++
T Consensus 306 ~aa~~v~~~G~~~~~p~~~ev~ 327 (331)
T 2fv7_A 306 IAAVSVQAAGTQSSYPYKKDLP 327 (331)
T ss_dssp HHHHHHTSSSGGGGCCCGGGSC
T ss_pred HHHHHhCCCCCccCCCCHHHHh
Confidence 9999999999887777766654
No 29
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=100.00 E-value=1.1e-44 Score=336.05 Aligned_cols=295 Identities=20% Similarity=0.314 Sum_probs=233.8
Q ss_pred cCCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhh
Q 018120 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (360)
Q Consensus 13 ~~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~ 92 (360)
+++.+|+++| ++++|++.... ......+||+++|+|++|++
T Consensus 22 ~~m~~ilviG-~~~~D~~~~~~-------------------------------------~~~~~~~GG~~~NvA~~la~- 62 (339)
T 1tyy_A 22 KAMNKVWVIG-DASVDLVPEKQ-------------------------------------NSYLKCPGGASANVGVCVAR- 62 (339)
T ss_dssp ---CCEEEES-CCEEEEEECSS-------------------------------------SEEEEEEECHHHHHHHHHHH-
T ss_pred cccCCEEEEC-cceeEEeccCC-------------------------------------CceEEcCCCHHHHHHHHHHH-
Confidence 4446899999 99999998631 03568899999999999999
Q ss_pred cCCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeeccc--ccccCCCcccCCccccC
Q 018120 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCL--SNAVKIQADELIAEDVK 169 (360)
Q Consensus 93 lG~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~~~--~~~~~~~~~~~~~~~~~ 169 (360)
||.++.++|.+|+|.+|+++++.|++.||+++++...++ +|+.+++.++++|+|++..+. ++...++++ ..+.++
T Consensus 63 LG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~--~~~~l~ 140 (339)
T 1tyy_A 63 LGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQ--DLPPFR 140 (339)
T ss_dssp TTCCEEEEEEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGG--GCCCCC
T ss_pred cCCCeEEEEeeCCCHHHHHHHHHHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcc--hhhHhc
Confidence 999999999999999999999999999999999987554 799999988888998875543 444455544 234578
Q ss_pred CCcEEEEe-eccc---CHHHHHHHHHHHHHCCCeEEEeCCChhH----HHhhhHHHHHhhccCCccEEEcCHHHHHHhhc
Q 018120 170 GSKWLVLR-FGMF---NFEVIQAAIRIAKQEGLSVSMDLASFEM----VRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241 (360)
Q Consensus 170 ~~~~v~~~-~~~~---~~~~~~~~~~~a~~~~~~v~~d~~~~~~----~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~ 241 (360)
++|+++++ +... +.+.+.++++.+++.+.++++||+.... ...+++.+.++++ ++|++++|++|+..|++
T Consensus 141 ~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~--~~dil~~N~~Ea~~l~g 218 (339)
T 1tyy_A 141 QYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAA--LASICKVSADELCQLSG 218 (339)
T ss_dssp TTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHH--HCSEEEEEHHHHHHHHC
T ss_pred cCCEEEEcchhhcCcccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHh--hCCEEecCHHHHHHHhC
Confidence 89999998 3222 3467888999999999999999974321 1134556677788 89999999999999998
Q ss_pred CCCCCcHHHH-HHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcC-----CCHH
Q 018120 242 GEENADSEAA-LEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKG-----LSLE 315 (360)
Q Consensus 242 ~~~~~~~~~~-~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~-----~~l~ 315 (360)
.. +++++ .+++..+++.||||+|++|++++++++.+++|+++ ++++|||||||+|+|||++++++| ++++
T Consensus 219 ~~---~~~~~~~~l~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~-v~vvDttGAGDaF~ag~~~~l~~g~~~~~~~l~ 294 (339)
T 1tyy_A 219 AS---HWQDARYYLRDLGCDTTIISLGADGALLITAEGEFHFPAPR-VDVVDTTGAGDAFVGGLLFTLSRANCWDHALLA 294 (339)
T ss_dssp CS---SGGGGSSTTGGGTCSCEEEECGGGCEEEESSSCEEEECCCC-CCCSCCTTHHHHHHHHHHHHHTTSSSCCHHHHH
T ss_pred CC---CHHHHHHHHHHcCCCEEEEEECCCceEEEeCCceEEcCCCC-CCcCCCCCchHHHHHHHHHHHHhccccccccHH
Confidence 53 33333 33445588999999999999999888889999984 789999999999999999999997 8999
Q ss_pred HHHHHHHHHhcchhcccCCccCcccHHHHHHHHHHcCCC
Q 018120 316 ECCKVGSCSGGSVIRSLGGEVTPENWQWMRKQMQIRGLP 354 (360)
Q Consensus 316 ~a~~~a~~aaa~~v~~~G~~~~~~~~~~~~~~~~~~~~~ 354 (360)
+|+++|+++|+.+|++.|+....++.++++++++.+.+.
T Consensus 295 ~a~~~A~a~aa~~v~~~G~~~~~p~~~ev~~~l~~~~~~ 333 (339)
T 1tyy_A 295 EAISNANACGAMAVTAKGAMTALPFPDQLNTFLSSHSLA 333 (339)
T ss_dssp HHHHHHHHHHHHGGGSSSTTTTCCCHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHhcCccc
Confidence 999999999999999999988889999999999877653
No 30
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=100.00 E-value=1.2e-43 Score=327.59 Aligned_cols=283 Identities=18% Similarity=0.228 Sum_probs=235.1
Q ss_pred cCCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhh
Q 018120 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (360)
Q Consensus 13 ~~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~ 92 (360)
..+++|+++| ++++|++...+. ......+||+++|+|++|++
T Consensus 21 ~~m~~i~viG-~~~iD~~~~~~~------------------------------------~~~~~~~GG~~~NvA~~la~- 62 (328)
T 4e69_A 21 QSMMHILSIG-ECMAELAPADLP------------------------------------GTYRLGFAGDTFNTAWYLAR- 62 (328)
T ss_dssp BSSCEEEEES-CCEEEEEECSST------------------------------------TEEEEEEECHHHHHHHHHHH-
T ss_pred ccCCcEEEec-CcEEEEecCCCC------------------------------------CceEEecCCHHHHHHHHHHh-
Confidence 4557999999 999999986210 03678999999999999999
Q ss_pred c--CCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeeccccccc---CCCcccCCcc
Q 018120 93 F--GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAV---KIQADELIAE 166 (360)
Q Consensus 93 l--G~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~~~~~~~---~~~~~~~~~~ 166 (360)
| |.++.++|.||+|.+|+.+++.|++.||+++++...++ +|+.++++++ +|+|++..+.+... .++..++..+
T Consensus 63 Lg~G~~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~~ 141 (328)
T 4e69_A 63 LRPESRISYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLE-QGERSFAYWRGQSAARELAGDADALAA 141 (328)
T ss_dssp HCTTSEEEEECEECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEE-TTEEEEEEECTTCGGGGTTSCHHHHHH
T ss_pred cCCCCcEEEEEeeCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEec-CCceEEEEeCCCCHHHhhcCccccchH
Confidence 9 89999999999999999999999999999999887665 7999999999 89999876655422 2333333346
Q ss_pred ccCCCcEEEEe-ec--cc---CHHHHHHHHHHHHHCCCeEEEeCCChh----HHHhhhHHHHHhhccCCccEEEcCHHHH
Q 018120 167 DVKGSKWLVLR-FG--MF---NFEVIQAAIRIAKQEGLSVSMDLASFE----MVRNFRTPLLQLLESGDVDLCFANEDEA 236 (360)
Q Consensus 167 ~~~~~~~v~~~-~~--~~---~~~~~~~~~~~a~~~~~~v~~d~~~~~----~~~~~~~~l~~~l~~~~~dil~~n~~E~ 236 (360)
.++++|+++++ +. .+ +.+.+.++++.+++.++++++||+... ....+++.+.++++ ++|++++|++|+
T Consensus 142 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~--~~dil~~N~~E~ 219 (328)
T 4e69_A 142 AMARADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAA--VSDIALPSFEDE 219 (328)
T ss_dssp HHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHT--TCSEECCBHHHH
T ss_pred HhcCCCEEEECCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHH--hCCEEeCCHHHH
Confidence 68999999999 21 12 346778899999999999999996321 11234566778888 899999999999
Q ss_pred HHhhcCCCCCcHHHHHHH-HHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHH
Q 018120 237 AELVRGEENADSEAALEF-LAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLE 315 (360)
Q Consensus 237 ~~l~~~~~~~~~~~~~~~-l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~ 315 (360)
..|++.. +.+++.+. .+.+++.|+||+|++|++++++++.+++|+++..+++||+||||+|+|+|++++++|++++
T Consensus 220 ~~l~g~~---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~l~ 296 (328)
T 4e69_A 220 AAWFGDA---GPDATADRYARAGVRSVVVKNGPHAVHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGLLDSVLAGQPLE 296 (328)
T ss_dssp HHHHTCS---SHHHHHHHHHTTTCSEEEEBCTTSCEEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHcCCC---CHHHHHHHHHhcCCCEEEEEeCCCCeEEEeCCceEEecCCCCCCccCCCChhHHHHHHHHHHHHCCCCHH
Confidence 9999853 56555554 4557899999999999999999999999998557899999999999999999999999999
Q ss_pred HHHHHHHHHhcchhcccCCccCcc
Q 018120 316 ECCKVGSCSGGSVIRSLGGEVTPE 339 (360)
Q Consensus 316 ~a~~~a~~aaa~~v~~~G~~~~~~ 339 (360)
+|+++|+++|+.+|++.|+.....
T Consensus 297 ~a~~~A~~~aa~~v~~~Ga~~p~~ 320 (328)
T 4e69_A 297 TAIAAAAALAGQVVQGKGALVEVP 320 (328)
T ss_dssp HHHHHHHHHHHHHHTSSSSSCCC-
T ss_pred HHHHHHHHHHHHHHccCCCcCChh
Confidence 999999999999999999886543
No 31
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=100.00 E-value=2.3e-43 Score=323.26 Aligned_cols=291 Identities=22% Similarity=0.262 Sum_probs=237.8
Q ss_pred CeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCC
Q 018120 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (360)
Q Consensus 16 ~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~ 95 (360)
++|++++.|+.+|+++.++ ++ ..|+... .......+||++.|+|++|++ ||.
T Consensus 2 ~~i~~v~~n~~~D~~~~v~-----~~--~~g~~~~--------------------~~~~~~~~GG~~~NvA~~la~-LG~ 53 (309)
T 3umo_A 2 VRIYTLTLAPSLDSATITP-----QI--YPEGKLR--------------------CTAPVFEPGGGGINVARAIAH-LGG 53 (309)
T ss_dssp CCEEEECSSCEEEEEEEES-----CC--CSSSEEE--------------------CCCCEEEEESHHHHHHHHHHH-TTC
T ss_pred CcEEEEecchhheEEEEcC-----cc--cCCCeEE--------------------eceeeecCCchHHHHHHHHHH-cCC
Confidence 5688887699999999996 44 3443332 236889999999999999999 999
Q ss_pred ceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEc-CCCceeeecccccccCCCcccCCc-----cccC
Q 018120 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVD-ASGNRTMRPCLSNAVKIQADELIA-----EDVK 169 (360)
Q Consensus 96 ~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~-~~g~r~~~~~~~~~~~~~~~~~~~-----~~~~ 169 (360)
++.++|.+|+| +|+.+++.|++.||+++++... .+|+.++.+++ ++|+|+++...++ .+++++++. +.+.
T Consensus 54 ~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~-~~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~ 129 (309)
T 3umo_A 54 SATAIFPAGGA-TGEHLVSLLADENVPVATVEAK-DWTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIE 129 (309)
T ss_dssp CEEEEEEECHH-HHHHHHHHHHHTTCCEEEEECS-SCCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHTTSC
T ss_pred CeEEEEEecCc-hHHHHHHHHHHcCCceEEEEec-CCCeeEEEEEECCCCcEEEEEcCCC--CCCHHHHHHHHHHHHhcC
Confidence 99999999998 9999999999999999998775 35666666554 4789988776654 356555421 1246
Q ss_pred CCcEEEEeec---ccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCC-ccEEEcCHHHHHHhhcCC--
Q 018120 170 GSKWLVLRFG---MFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGD-VDLCFANEDEAAELVRGE-- 243 (360)
Q Consensus 170 ~~~~v~~~~~---~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~-~dil~~n~~E~~~l~~~~-- 243 (360)
.+++++++.. ..+.+.+.++++.++++++++++||+. +.+.++++. . +|++++|++|+..|++..
T Consensus 130 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~--------~~l~~~l~~-~~~dil~~N~~E~~~l~g~~~~ 200 (309)
T 3umo_A 130 SGAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSG--------EALSAALAI-GNIELVKPNQKELSALVNRELT 200 (309)
T ss_dssp TTCEEEEESCCCTTCCHHHHHHHHHHHHHTTCEEEEECCH--------HHHHHHTSS-CCBSEECCBHHHHHHHHTSCCC
T ss_pred CCCEEEEEccCCCCCCHHHHHHHHHHHHhcCCEEEEECCc--------HHHHHHhcc-CCCeEEEeCHHHHHHHhCCCCC
Confidence 7889999832 235789999999999999999999963 346677772 2 699999999999999864
Q ss_pred CCCcHHHHHH-HHHcCC-CEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHH
Q 018120 244 ENADSEAALE-FLAKRC-QWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVG 321 (360)
Q Consensus 244 ~~~~~~~~~~-~l~~~~-~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a 321 (360)
+.++..++.+ +++.+. +.|+||+|++|++++++++.+++|+++ .+++||+||||+|+|||+++|++|+++++|+++|
T Consensus 201 ~~~~~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~vvdttGAGD~f~a~~~~~l~~g~~~~~a~~~A 279 (309)
T 3umo_A 201 QPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPP-VKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFG 279 (309)
T ss_dssp STTHHHHHHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCS-CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCcEEEEEcCcccEEEEECCcEEEEeCCC-cCCCCCcChHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 2234555444 455565 799999999999999999999999984 7899999999999999999999999999999999
Q ss_pred HHHhcchhcccCCccCcccHHHHHHHHHH
Q 018120 322 SCSGGSVIRSLGGEVTPENWQWMRKQMQI 350 (360)
Q Consensus 322 ~~aaa~~v~~~G~~~~~~~~~~~~~~~~~ 350 (360)
+++|+.+|++.|+. .++.+++++++++
T Consensus 280 ~~~aa~~v~~~G~~--~~~~~ev~~~l~~ 306 (309)
T 3umo_A 280 VAAGSAATLNQGTR--LCSHDDTQKIYAY 306 (309)
T ss_dssp HHHHHHHTTSSTTC--CCCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCC--CCCHHHHHHHHHH
Confidence 99999999999986 7788999888874
No 32
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=100.00 E-value=1e-43 Score=326.19 Aligned_cols=291 Identities=19% Similarity=0.224 Sum_probs=238.0
Q ss_pred eEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCCc
Q 018120 17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP 96 (360)
Q Consensus 17 ~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~~ 96 (360)
+|+++| ++++|++...+ +.. .+.......+||++.|+|++|++ ||.+
T Consensus 3 ~v~viG-~~~~D~~~~~~-----------~~~--------------------~~~~~~~~~~GG~~~N~A~~la~-LG~~ 49 (313)
T 2v78_A 3 DVIALG-EPLIQFNSFNP-----------GPL--------------------RFVNYFEKHVAGSELNFCIAVVR-NHLS 49 (313)
T ss_dssp CEEEEC-CCEEEEEESSS-----------SCG--------------------GGCCEEEEEEECHHHHHHHHHHH-TTCC
T ss_pred eEEEEC-cceEEEecCCC-----------Ccc--------------------cccceeEecCCChHHHHHHHHHH-CCCc
Confidence 699999 99999996431 100 01124778999999999999999 9999
Q ss_pred eEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEE--EcCCCceeeeccc--ccccCCCcccCCccccCCC
Q 018120 97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCL--VDASGNRTMRPCL--SNAVKIQADELIAEDVKGS 171 (360)
Q Consensus 97 v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~--~~~~g~r~~~~~~--~~~~~~~~~~~~~~~~~~~ 171 (360)
+.++|.+|+|.+|+.+++.|++.||+++++...++ +|+.+++. ++++|+|++..+. ++...+++++++.+.++++
T Consensus 50 ~~~i~~vG~D~~g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~ 129 (313)
T 2v78_A 50 CSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRNS 129 (313)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCHHHHHTS
T ss_pred EEEEEEeCCCHHHHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCHHHhcCC
Confidence 99999999999999999999999999999887655 89999998 8878888875443 4566788888877778899
Q ss_pred cEEEEe-ecc----cCHHHHHHHHHHHHHCCCeEEEeCCChhH----HHhhhHHHHHhhccCCcc--EEEcCHHHHHHhh
Q 018120 172 KWLVLR-FGM----FNFEVIQAAIRIAKQEGLSVSMDLASFEM----VRNFRTPLLQLLESGDVD--LCFANEDEAAELV 240 (360)
Q Consensus 172 ~~v~~~-~~~----~~~~~~~~~~~~a~~~~~~v~~d~~~~~~----~~~~~~~l~~~l~~~~~d--il~~n~~E~~~l~ 240 (360)
+++|++ +.. .+.+.+.++++.+++. ++|++.... ...+++.+.++++ ++| ++++|++|+..|+
T Consensus 130 ~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~--~~d~~il~~N~~E~~~l~ 203 (313)
T 2v78_A 130 RLVHSTGITLAISDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILK--KYDIEVLITDPDDTKILL 203 (313)
T ss_dssp SEEEEEHHHHHHCHHHHHHHHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHH--HSCEEEEEECHHHHHHHH
T ss_pred CEEEEcCchhhcChHHHHHHHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHH--hcCeeEEECcHHHHHHHh
Confidence 999998 221 1235566666666544 899974211 1233456777888 899 9999999999999
Q ss_pred cCCCCCcHHHHH-HHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHH
Q 018120 241 RGEENADSEAAL-EFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCK 319 (360)
Q Consensus 241 ~~~~~~~~~~~~-~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~ 319 (360)
+. ++++++. +++..+++.|+||+|++|++++++++.+++|+++ ++++|||||||+|+|||++++++|+++++|++
T Consensus 204 g~---~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~ 279 (313)
T 2v78_A 204 DV---TDPDEAYRKYKELGVKVLLYKLGSKGAIAYKDNVKAFKDAYK-VPVEDPTGAGDAMAGTFVSLYLQGKDIEYSLA 279 (313)
T ss_dssp SC---CCHHHHHHHHHHTTEEEEEEECGGGCEEEEETTEEEEECCCC-CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CC---CCHHHHHHHHHhCCCCEEEEEECCCCcEEeeCCcEEEeCCCc-CCccCCCCchHHHHHHHHHHHHcCCCHHHHHH
Confidence 85 3555544 4555578899999999999999999999999985 78999999999999999999999999999999
Q ss_pred HHHHHhcchhcccCCccCcccHHHHHHHHHH
Q 018120 320 VGSCSGGSVIRSLGGEVTPENWQWMRKQMQI 350 (360)
Q Consensus 320 ~a~~aaa~~v~~~G~~~~~~~~~~~~~~~~~ 350 (360)
+|+++|+.+|++.|+....++.++++++++.
T Consensus 280 ~a~~~aa~~v~~~G~~~~~~~~~~v~~~~~~ 310 (313)
T 2v78_A 280 HGIAASTLVITVRGDNELTPTLEDAERFLNE 310 (313)
T ss_dssp HHHHHHHHHHTSSSSSTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Confidence 9999999999999998778899999888874
No 33
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=100.00 E-value=1.2e-43 Score=325.54 Aligned_cols=294 Identities=20% Similarity=0.228 Sum_probs=237.0
Q ss_pred CeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCC
Q 018120 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (360)
Q Consensus 16 ~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~ 95 (360)
++|+++| ++++|++...+. .. .+.......+||++.|+|.+|++ ||.
T Consensus 2 ~~v~viG-~~~~D~~~~~~~-----------~~--------------------~~~~~~~~~~GG~~~NvA~~la~-LG~ 48 (311)
T 2dcn_A 2 AKLITLG-EILIEFNALSPG-----------PL--------------------RHVSYFEKHVAGSEANYCVAFIK-QGN 48 (311)
T ss_dssp CEEEEES-CCEEEEEESSSS-----------CG--------------------GGCCEEEEEEECHHHHHHHHHHH-TTC
T ss_pred CCEEEEC-CceEEEecCCCC-----------cc--------------------cccceeeecCCChHHHHHHHHHH-CCC
Confidence 4799999 999999984321 00 01124678999999999999999 999
Q ss_pred ceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCc--eeeeccc--ccccCCCcccCCccccCC
Q 018120 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGN--RTMRPCL--SNAVKIQADELIAEDVKG 170 (360)
Q Consensus 96 ~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~--r~~~~~~--~~~~~~~~~~~~~~~~~~ 170 (360)
++.++|.+|+|.+|+++++.|++.||+++++...++ +|+.+++.++++|+ |++..+. ++...+++++++...+++
T Consensus 49 ~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 128 (311)
T 2dcn_A 49 ECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKS 128 (311)
T ss_dssp EEEEECEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTT
T ss_pred ceEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcChHHHcC
Confidence 999999999999999999999999999999887655 89999999988888 8775443 456678888887777899
Q ss_pred CcEEEEe-ecc----cCHHHHHHHHHHHHHCCCeEEEeCCChh---HHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcC
Q 018120 171 SKWLVLR-FGM----FNFEVIQAAIRIAKQEGLSVSMDLASFE---MVRNFRTPLLQLLESGDVDLCFANEDEAAELVRG 242 (360)
Q Consensus 171 ~~~v~~~-~~~----~~~~~~~~~~~~a~~~~~~v~~d~~~~~---~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~ 242 (360)
++++|++ +.. .+.+.+.++++.+++. ++|++... ....+++.+.++++..++|++++|++|+..|++.
T Consensus 129 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~ 204 (311)
T 2dcn_A 129 ADLVHSSGITLAISSTAKEAVYKAFEIASNR----SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILGE 204 (311)
T ss_dssp CSEEEEEHHHHHSCHHHHHHHHHHHHHCSSE----EEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSC
T ss_pred CCEEEEeCcccccChHHHHHHHHHHHHHHHh----CcCccCchhhCChHHHHHHHHHHHhhcCCcEEECCHHHHHHHhCC
Confidence 9999998 221 1235666667666554 89997421 1122334555666511589999999999999985
Q ss_pred CCCCcHHHHHHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHH
Q 018120 243 EENADSEAALEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVGS 322 (360)
Q Consensus 243 ~~~~~~~~~~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~ 322 (360)
++++++.+.+.+..+.|+||+|++|++++++++.+++|+++ ++++|||||||+|+|||++++++|+++++|+++|+
T Consensus 205 ---~~~~~~~~~l~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~a~ 280 (311)
T 2dcn_A 205 ---SDPDKAAKAFSDYAEIIVMKLGPKGAIVYYDGKKYYSSGYQ-VPVEDVTGAGDALGGTFLSLYYKGFEMEKALDYAI 280 (311)
T ss_dssp ---CCHHHHHHHHTTTEEEEEEEEETTEEEEEETTEEEEEECCC-CCCSCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHhCCEEEEEECCCCcEEEeCCcEEEeCCcc-ccccCCCCchHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 35655555443337789999999999999999999999985 78999999999999999999999999999999999
Q ss_pred HHhcchhcccCCccCcccHHHHHHHHHH
Q 018120 323 CSGGSVIRSLGGEVTPENWQWMRKQMQI 350 (360)
Q Consensus 323 ~aaa~~v~~~G~~~~~~~~~~~~~~~~~ 350 (360)
++|+.++++.|+....++.++++++++.
T Consensus 281 ~~aa~~v~~~G~~~~~~~~~~v~~~~~~ 308 (311)
T 2dcn_A 281 VASTLNVMIRGDQENLPTTKDIETFLRE 308 (311)
T ss_dssp HHHHHHTTSSSSSTTCCCHHHHHHHHHH
T ss_pred HHHHHHhccCCCCCCCCCHHHHHHHHHh
Confidence 9999999999998888899999888764
No 34
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=100.00 E-value=9e-44 Score=326.59 Aligned_cols=287 Identities=21% Similarity=0.285 Sum_probs=239.1
Q ss_pred CeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCC
Q 018120 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (360)
Q Consensus 16 ~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~ 95 (360)
.+|+++| ++++|++...+. . ..+.......+||++.|+|++|++ ||.
T Consensus 2 ~~v~viG-~~~iD~~~~~~g-----------~--------------------~~~~~~~~~~~GG~~~NvA~~la~-LG~ 48 (313)
T 3ewm_A 2 SLIASIG-ELLIDLISVEEG-----------D--------------------LKDVRLFEKHPGGAPANVAVGVSR-LGV 48 (313)
T ss_dssp CEEEEES-CCEEEEEESSSS-----------C--------------------TTTCCEEEEEEECHHHHHHHHHHH-TTC
T ss_pred CcEEEEC-ceeeeeecCCCC-----------C--------------------cccccceeecCCCHHHHHHHHHHH-CCC
Confidence 5799999 999999976421 0 112235789999999999999999 999
Q ss_pred ceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeecccc-cccCCCcccCCccccCCCcE
Q 018120 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLS-NAVKIQADELIAEDVKGSKW 173 (360)
Q Consensus 96 ~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 173 (360)
++.++|.+|+|.+|+++++.|++.||+++++...+. +|+.+++.++. |+|+++.+.+ +...+++++++.+.++++++
T Consensus 49 ~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~-g~~~~~~~~~~a~~~l~~~~~~~~~l~~~~~ 127 (313)
T 3ewm_A 49 KSSLISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKG-ASPSFLLYDDVAYFNMTLNDINWDIVEEAKI 127 (313)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECSS-SSCEEEECCSSGGGCCCGGGCCHHHHHHCSE
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHcCCCccceeecCCCCceEEEEEecC-CCcceEeeccCHHHhCChhhCCHHHhCCCCE
Confidence 999999999999999999999999999999886544 89999988875 8999877765 34678888888777889999
Q ss_pred EEEeecc----cCHHHHHHHHHHHHHCCCeEEEeCCChhH-----HHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCC
Q 018120 174 LVLRFGM----FNFEVIQAAIRIAKQEGLSVSMDLASFEM-----VRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEE 244 (360)
Q Consensus 174 v~~~~~~----~~~~~~~~~~~~a~~~~~~v~~d~~~~~~-----~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~ 244 (360)
++++... .+.+.+.++++.++ .++++++||+.... ...+.+.+.++++ ++|++++|++|++.|.+...
T Consensus 128 ~~~~g~~~~~~~~~~~~~~~~~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~--~~di~~~N~~E~~~l~~~~~ 204 (313)
T 3ewm_A 128 VNFGSVILARNPSRETVMKVIKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIK--LADIVKASEEEVLYLENQGV 204 (313)
T ss_dssp EEEESGGGGSTTHHHHHHHHHHHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHH--HCSEEEEEHHHHHHHHTTTC
T ss_pred EEEcCcccCCcchHHHHHHHHHHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHh--hCCEEecCHHHHHHHhccCc
Confidence 9999321 23578889999888 57899999975321 1233456777888 89999999999999987421
Q ss_pred CCcHHHHHHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHH--cCCCHHHHHHHHH
Q 018120 245 NADSEAALEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLV--KGLSLEECCKVGS 322 (360)
Q Consensus 245 ~~~~~~~~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~--~~~~l~~a~~~a~ 322 (360)
. ..+...|+||+|++|++++++++.+++|+++ ++++|||||||+|+|||+++|+ +|+++++|+++|+
T Consensus 205 ~----------~~~~~~vviT~G~~G~~~~~~~~~~~~~~~~-v~vvDttGAGDaf~a~~~~~l~~~~g~~l~~a~~~A~ 273 (313)
T 3ewm_A 205 E----------VKGSMLTAITLGPKGCRLIKNETVVDVPSYN-VNPLDTTGAGDAFMAALLVGILKLKGLDLLKLGKFAN 273 (313)
T ss_dssp C----------CCCSSEEEEECGGGEEEEEETTEEEEEECCC-CCCSCCTTHHHHHHHHHHHHHHHSSSCCHHHHHHHHH
T ss_pred c----------ccCceEEEEEECCCCeEEEECCeeEEcCCCC-cccCCCCCchHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 1 1235668999999999999999999999994 7899999999999999999998 9999999999999
Q ss_pred HHhcchhcccCCccCcccHHHHHHHHHHc
Q 018120 323 CSGGSVIRSLGGEVTPENWQWMRKQMQIR 351 (360)
Q Consensus 323 ~aaa~~v~~~G~~~~~~~~~~~~~~~~~~ 351 (360)
++|+.+|++.|+. +.|+.++++++++.+
T Consensus 274 ~~aa~~v~~~G~~-~~p~~~ev~~~l~~~ 301 (313)
T 3ewm_A 274 LVAALSTQKRGAW-STPRKDELLKYKEAR 301 (313)
T ss_dssp HHHHHHTTSCSSC-CCCCHHHHTTSHHHH
T ss_pred HHHHHHHccCCCC-CCCCHHHHHHHHHHH
Confidence 9999999999986 488999999888755
No 35
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=100.00 E-value=2.9e-43 Score=324.05 Aligned_cols=277 Identities=22% Similarity=0.271 Sum_probs=226.0
Q ss_pred CeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcC-
Q 018120 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG- 94 (360)
Q Consensus 16 ~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG- 94 (360)
++|+++| +.++|++...+ .....+||++.|+|++|++ ||
T Consensus 5 ~~i~viG-~~~~D~~~~~~--------------------------------------~~~~~~GG~~~NvA~~la~-LG~ 44 (319)
T 3lhx_A 5 KKIAVIG-ECMIELSEKGA--------------------------------------DVKRGFGGDTLNTSVYIAR-QVD 44 (319)
T ss_dssp EEEEEES-CCEEEEEC-----------------------------------------CCEEEEECHHHHHHHHHHT-TSC
T ss_pred Cceeeec-hhhhhhccCCC--------------------------------------ceEEecCChHHHHHHHHHH-cCC
Confidence 5799999 99999986531 3678999999999999999 99
Q ss_pred ---CceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeecccccc---cCCCcccCC--c
Q 018120 95 ---VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNA---VKIQADELI--A 165 (360)
Q Consensus 95 ---~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~~~~~~---~~~~~~~~~--~ 165 (360)
.++.++|.||+|.+|+++++.|++.||+++++...+. +|+.++++++++|+|+++.+.+.. ..+++++++ .
T Consensus 45 ~~~~~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 124 (319)
T 3lhx_A 45 PAALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAAIC 124 (319)
T ss_dssp TTTEEEEEECEECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHHHH
T ss_pred CCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhhHH
Confidence 8999999999999999999999999999999987765 799999999888999988766532 234444333 2
Q ss_pred cccCCCcEEEEe-ec--ccC---HHHHHHHHHHHHHCCCeEEEeCCChhH----HHhhhHHHHHhhccCCccEEEcCHHH
Q 018120 166 EDVKGSKWLVLR-FG--MFN---FEVIQAAIRIAKQEGLSVSMDLASFEM----VRNFRTPLLQLLESGDVDLCFANEDE 235 (360)
Q Consensus 166 ~~~~~~~~v~~~-~~--~~~---~~~~~~~~~~a~~~~~~v~~d~~~~~~----~~~~~~~l~~~l~~~~~dil~~n~~E 235 (360)
+.++++|+++++ +. .++ .+.+.++++.++++++++++||+.... ...+++.+.++++ ++|++++|++|
T Consensus 125 ~~l~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~--~~di~~~n~~E 202 (319)
T 3lhx_A 125 EELANFDYLYLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLE--CTDIAFLTLDD 202 (319)
T ss_dssp HHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHT--TCSEEEEEHHH
T ss_pred HHhcCCCEEEEcCchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHh--hCCcccCCHHH
Confidence 467899999999 21 122 378889999999999999999974321 1234556677888 89999999999
Q ss_pred HHHhhcCCCCCcHHHH-HHHHHcCCCEEEEEeCCCceEEEECCEEE-EeCCc--CCCcccCCCCccHHhHHHHHHHHHcC
Q 018120 236 AAELVRGEENADSEAA-LEFLAKRCQWAVVTLGPNGCIAKHGKEIV-KVPAI--GEAKAIDATGAGDLFASGFLYGLVKG 311 (360)
Q Consensus 236 ~~~l~~~~~~~~~~~~-~~~l~~~~~~vivt~G~~G~~~~~~~~~~-~~~~~--~~~~vvdttGAGD~f~ag~~~~l~~~ 311 (360)
++.|++.. +.+++ .++++.+++.|+||+|++|++++++++.+ ++|++ +..+++|||||||+|+|||++++++|
T Consensus 203 ~~~l~g~~---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g 279 (319)
T 3lhx_A 203 EDALWGQQ---PVEDVIARTHNAGVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTG 279 (319)
T ss_dssp HHHHHCCC---CHHHHHHHHHHTTCSEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTT
T ss_pred HHHHhCCC---CHHHHHHHHHhcCCCEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHHHHHHHcC
Confidence 99999853 55554 45556689999999999999999887655 88886 45789999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcchhcccCCccC
Q 018120 312 LSLEECCKVGSCSGGSVIRSLGGEVT 337 (360)
Q Consensus 312 ~~l~~a~~~a~~aaa~~v~~~G~~~~ 337 (360)
+++++|+++|+++|+.++++.|+...
T Consensus 280 ~~~~~a~~~A~~~aa~~v~~~Ga~~~ 305 (319)
T 3lhx_A 280 GSAENAAKRGHLTASTVIQYRGAIIP 305 (319)
T ss_dssp CCHHHHHHHHHHHHHHHTTSSSSSCC
T ss_pred CCHHHHHHHHHHHHHhhhccCCCcCC
Confidence 99999999999999999999998754
No 36
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=100.00 E-value=3.1e-43 Score=325.78 Aligned_cols=306 Identities=19% Similarity=0.229 Sum_probs=242.1
Q ss_pred CeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCC
Q 018120 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (360)
Q Consensus 16 ~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~ 95 (360)
.+|+++| ++++|+++.+++.+++.+- .++..... .-.........+||++.|+|++|++ ||.
T Consensus 11 m~i~v~G-~~~~D~~~~~~~~~~~~~~--~~~~~~~~--------------~~~~~~~~~~~~GG~~~NvA~~la~-LG~ 72 (334)
T 2pkf_A 11 MTIAVTG-SIATDHLMRFPGRFSEQLL--PEHLHKVS--------------LSFLVDDLVMHRGGVAGNMAFAIGV-LGG 72 (334)
T ss_dssp SEEEEES-CCEEEEEEECSSCTHHHHT--TSCGGGCC--------------CCCCCSEEEEEEECHHHHHHHHHHH-TTC
T ss_pred CeEEEEC-ChhheEEEecChHHhhhhc--hhhccccc--------------cccccccceecCCChHHHHHHHHHH-cCC
Confidence 4799999 9999999998544443331 00000000 0001124678999999999999999 999
Q ss_pred ceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeecccccccCCCcccCCcc--ccCCCc
Q 018120 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAE--DVKGSK 172 (360)
Q Consensus 96 ~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~ 172 (360)
++.++|.+|+| +|+ +++.|++.||+++++...++ +|+.++++++++|+|++..+.++...++.+++... .+++++
T Consensus 73 ~~~~i~~vG~D-~g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~l~~~~ 150 (334)
T 2pkf_A 73 EVALVGAAGAD-FAD-YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLADVVSAIGKPE 150 (334)
T ss_dssp EEEEECEECGG-GHH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEECGGGGGGGGCCHHHHHHHHCSCS
T ss_pred CeEEEEEEeCc-hHH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECCchhhhCCHhhcChhhhhhcCCC
Confidence 99999999999 999 99999999999999887654 79999999998899988666666655555555432 247899
Q ss_pred EEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCCCcHHHHH
Q 018120 173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEENADSEAAL 252 (360)
Q Consensus 173 ~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~ 252 (360)
++|++.. .++.+.++++.+++.+.++++||+..... ...+.+.++++ ++|++++|++|+..+++.... +.+
T Consensus 151 ~v~~~~~--~~~~~~~~~~~a~~~g~~v~~D~~~~~~~-~~~~~l~~~l~--~~dil~~N~~E~~~l~g~~~~-~~~--- 221 (334)
T 2pkf_A 151 LVIIGAN--DPEAMFLHTEECRKLGLAFAADPSQQLAR-LSGEEIRRLVN--GAAYLFTNDYEWDLLLSKTGW-SEA--- 221 (334)
T ss_dssp EEEEESC--CHHHHHHHHHHHHHHTCCEEEECGGGGGT-SCHHHHHTTTT--TCSEEEEEHHHHHHHHHHHCC-CHH---
T ss_pred EEEEcCC--ChHHHHHHHHHHHhcCCeEEEeccchhhh-hhHHHHHHHHh--cCCEEecCHHHHHHHhccCCC-CHH---
Confidence 9999832 36788899999999999999999753210 01255677888 899999999999999874321 222
Q ss_pred HHHHcCCCEEEEEeCCCceEEEECCE-EEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHHHHhcchhcc
Q 018120 253 EFLAKRCQWAVVTLGPNGCIAKHGKE-IVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVGSCSGGSVIRS 331 (360)
Q Consensus 253 ~~l~~~~~~vivt~G~~G~~~~~~~~-~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~~aaa~~v~~ 331 (360)
+++ ++++.|+||+|++|++++++++ .+++|+++...++|||||||+|+|||++++++|+++++|+++|+++|+.++++
T Consensus 222 ~l~-~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~ 300 (334)
T 2pkf_A 222 DVM-AQIDLRVTTLGPKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGSLVAVLVLES 300 (334)
T ss_dssp HHH-TTCSCEEEECGGGCEEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTS
T ss_pred HHH-hcCCEEEEEeCCCCeEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhC
Confidence 233 3488999999999999998887 89999985334789999999999999999999999999999999999999999
Q ss_pred cCCccCcccHHHHHHHHHHc
Q 018120 332 LGGEVTPENWQWMRKQMQIR 351 (360)
Q Consensus 332 ~G~~~~~~~~~~~~~~~~~~ 351 (360)
.|+....++.++++++++.+
T Consensus 301 ~G~~~~~p~~~ev~~~l~~~ 320 (334)
T 2pkf_A 301 TGTQEWQWDYEAAASRLAGA 320 (334)
T ss_dssp SSSSCCCCCHHHHHHHHHHH
T ss_pred CCCCcCCCCHHHHHHHHHHH
Confidence 99998889999999888753
No 37
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=100.00 E-value=1.2e-42 Score=318.92 Aligned_cols=282 Identities=22% Similarity=0.325 Sum_probs=229.9
Q ss_pred ccCCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHh
Q 018120 12 ASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSV 91 (360)
Q Consensus 12 ~~~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~ 91 (360)
..++++|+++| ++++|+++.++ +++.+ ++.. +.......+||++.|+|++|++
T Consensus 14 ~~~~~~i~viG-~~~iD~~~~~~-----~~p~~-~~~~--------------------~~~~~~~~~GG~~~NvA~~la~ 66 (312)
T 2hlz_A 14 VPRGSQILCVG-LVVLDVISLVD-----KYPKE-DSEI--------------------RCLSQRWQRGGNASNSCTILSL 66 (312)
T ss_dssp ---CCEEEEES-CCEEEEEEEES-----SCCCT-TCEE--------------------ECSEEEEEEESHHHHHHHHHHH
T ss_pred CCCCCcEEEEC-cceEEEeeccc-----cCCCc-ccee--------------------ecccceeccCccHHHHHHHHHH
Confidence 34567899999 99999999985 45422 2111 1113568899999999999999
Q ss_pred hcCCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecC-CCCeeEEEEEc-CCCceeeecccccccCCCcccCCccccC
Q 018120 92 GFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVD-ASGNRTMRPCLSNAVKIQADELIAEDVK 169 (360)
Q Consensus 92 ~lG~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~-~~t~~~~~~~~-~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 169 (360)
||.++.++|.+|+|.+|+++++.|++.||+++++...+ .+|+.++++++ ++|+|+++.+.++...+++++++...++
T Consensus 67 -LG~~v~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~~~l~ 145 (312)
T 2hlz_A 67 -LGAPCAFMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEKVDLT 145 (312)
T ss_dssp -HTCCEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHTSCGG
T ss_pred -cCCceEEEEEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhHhhhc
Confidence 99999999999999999999999999999999988764 47888888776 4799998877777777777776555678
Q ss_pred CCcEEEEeecccCHHHHHHHHHHHHHC--------CCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhc
Q 018120 170 GSKWLVLRFGMFNFEVIQAAIRIAKQE--------GLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241 (360)
Q Consensus 170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~--------~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~ 241 (360)
+++++|++.. .++...++++.+++. +.++++|+.. +++.+.++++ ++|++++|++|+..+ +
T Consensus 146 ~~~~v~~~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~------~~~~~~~~l~--~~dil~~n~~ea~~l-g 214 (312)
T 2hlz_A 146 QFKWIHIEGR--NASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEK------PREELFQLFG--YGDVVFVSKDVAKHL-G 214 (312)
T ss_dssp GEEEEEEECS--SHHHHHHHHHHHHHHHTTSCGGGCCEEEEEECS------CCGGGGGGGG--SSSEEEECHHHHHHT-T
T ss_pred cCCEEEEecc--CHHHHHHHHHHHHHhcccccCCCCeEEEEEccc------chHHHHHHHh--cCCEEEEcHHHHHHc-C
Confidence 8999999833 467778888888876 6899999964 2355677888 899999999999987 5
Q ss_pred CCCCCcHHHHHHHHHc-CC--CEEEEEeCCCceEEEEC-CEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHH
Q 018120 242 GEENADSEAALEFLAK-RC--QWAVVTLGPNGCIAKHG-KEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEEC 317 (360)
Q Consensus 242 ~~~~~~~~~~~~~l~~-~~--~~vivt~G~~G~~~~~~-~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a 317 (360)
. ++.+++.+.+.+ .. +.|+||+|++|++++++ ++.+++|+++..+++||+||||+|+|||++++++|+++++|
T Consensus 215 ~---~~~~~~~~~l~~~~~~g~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a~~~~~l~~g~~~~~a 291 (312)
T 2hlz_A 215 F---QSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEA 291 (312)
T ss_dssp C---CSHHHHHHHHGGGSCTTCEEEEECGGGCEEEECTTCCEEEECCCCCSSCCCCTTHHHHHHHHHHHHHHTTCCHHHH
T ss_pred C---CCHHHHHHHHHHhcCCCCEEEEEecccCeEEEccCCCEEECCCCCCCCcccCCCchHHHHHHHHHHHHcCCCHHHH
Confidence 3 356666555544 33 79999999999999875 55788999655789999999999999999999999999999
Q ss_pred HHHHHHHhcchhcccCCc
Q 018120 318 CKVGSCSGGSVIRSLGGE 335 (360)
Q Consensus 318 ~~~a~~aaa~~v~~~G~~ 335 (360)
+++|+++|+.+|++.|+.
T Consensus 292 ~~~a~~~aa~~v~~~G~~ 309 (312)
T 2hlz_A 292 LRFGCQVAGKKCGLQGFD 309 (312)
T ss_dssp HHHHHHHHHHHHTSSSSG
T ss_pred HHHHHHHHHHHHhhcCcc
Confidence 999999999999999864
No 38
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=100.00 E-value=2.8e-42 Score=316.09 Aligned_cols=288 Identities=24% Similarity=0.276 Sum_probs=227.3
Q ss_pred eEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCCc
Q 018120 17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP 96 (360)
Q Consensus 17 ~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~~ 96 (360)
+|+++++++++|+++.++ ++ ..|+.... ......+||++.|+|.+|++ ||.+
T Consensus 3 ~I~~v~g~~~~D~~~~~~-----~~--~~g~~~~~--------------------~~~~~~~GG~~~NvA~~la~-LG~~ 54 (309)
T 3cqd_A 3 RIYTLTLAPSLDSATITP-----QI--YPEGKLRC--------------------TAPVFEPGGGGINVARAIAH-LGGS 54 (309)
T ss_dssp CEEEECSSCEEEEEEEES-----CC--CSSSEEEC--------------------CCCEEEEESHHHHHHHHHHH-TTCC
T ss_pred eEEEEeccchheEEEEcC-----CC--cCCCeeec--------------------cceeecCCchHHHHHHHHHH-cCCC
Confidence 578554499999999996 32 34433322 25789999999999999999 9999
Q ss_pred eEEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEE-EcCCCceeeecccccccCCCcccCCc------cccC
Q 018120 97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCL-VDASGNRTMRPCLSNAVKIQADELIA------EDVK 169 (360)
Q Consensus 97 v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~-~~~~g~r~~~~~~~~~~~~~~~~~~~------~~~~ 169 (360)
+.++|.+|+| +|+++++.|++.||+++++...+ .|+.++++ ++++|+|+++...++ .+++++++. +.++
T Consensus 55 ~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~ 130 (309)
T 3cqd_A 55 ATAIFPAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIES 130 (309)
T ss_dssp EEEEEEECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHHTSCT
T ss_pred eEEEEEecCc-hHHHHHHHHHHcCCCceeEEcCC-CCeeEEEEEEcCCCCEEEEEcCCC--CCCHHHHHHHHHHHHHhhc
Confidence 9999999997 99999999999999999987654 47777777 888888876655443 355554431 2367
Q ss_pred CCcEEEEeecc---cCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhh-ccCCc-cEEEcCHHHHHHhhcCCC
Q 018120 170 GSKWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLL-ESGDV-DLCFANEDEAAELVRGEE 244 (360)
Q Consensus 170 ~~~~v~~~~~~---~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l-~~~~~-dil~~n~~E~~~l~~~~~ 244 (360)
+ +++|+++.. .+.+.+.++++.+++.+.++++||+.. .+.+.+ + .+ |++++|++|+..|++...
T Consensus 131 ~-~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~~~~~l~~--~~~dil~~N~~E~~~l~g~~~ 199 (309)
T 3cqd_A 131 G-AILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGE--------ALSAALAI--GNIELVKPNQKELSALVNREL 199 (309)
T ss_dssp T-CEEEEESCCCTTCCHHHHHHHHHHHHTTTCEEEEECCHH--------HHHHHTTT--CCBSEECCBHHHHHHHHTSCC
T ss_pred C-CEEEEECCCCCCCCHHHHHHHHHHHHHcCCeEEEECChH--------HHHHHHHh--CCCEEEeeCHHHHHHHhCCCC
Confidence 7 999998322 246889999999999999999999742 233333 4 78 999999999999998642
Q ss_pred --CCcHHHH-HHHHHcC-CCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHH
Q 018120 245 --NADSEAA-LEFLAKR-CQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKV 320 (360)
Q Consensus 245 --~~~~~~~-~~~l~~~-~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~ 320 (360)
.++..++ .+++..+ .+.|+||+|++|++++++++.+++|+++ ++++|||||||+|+|||++++++|+++++|+++
T Consensus 200 ~~~~~~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~ 278 (309)
T 3cqd_A 200 TQPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPP-VKSQSTVGAGDSMVGAMTLKLAENASLEEMVRF 278 (309)
T ss_dssp CSTTHHHHHHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCS-CCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCEEEEEecCCceEEEECCceEEEeCCc-cccCCCcCcHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 2344444 4455567 8899999999999999888888999984 789999999999999999999999999999999
Q ss_pred HHHHhcchhcccCCccCcccHHHHHHHHHH
Q 018120 321 GSCSGGSVIRSLGGEVTPENWQWMRKQMQI 350 (360)
Q Consensus 321 a~~aaa~~v~~~G~~~~~~~~~~~~~~~~~ 350 (360)
|+++|+.++++.|+. .++.++++++++.
T Consensus 279 A~~~aa~~~~~~G~~--~~~~~~v~~~~~~ 306 (309)
T 3cqd_A 279 GVAAGSAATLNQGTR--LCSHDDTQKIYAY 306 (309)
T ss_dssp HHHHHHHHTC-------CCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCcCCC--CCCHHHHHHHHHH
Confidence 999999999999975 5788888887763
No 39
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=1.5e-43 Score=323.69 Aligned_cols=285 Identities=18% Similarity=0.183 Sum_probs=229.5
Q ss_pred cccccCCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHH
Q 018120 9 NREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRG 88 (360)
Q Consensus 9 ~~~~~~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~ 88 (360)
+....+.++|+++| ++++|+++.++ +++ .|+.... ......+||+++|+|++
T Consensus 14 ~~~~~~~~~v~viG-~~~iD~~~~~~-----~~p--~g~~~~~--------------------~~~~~~~GG~~~NvA~~ 65 (306)
T 3bf5_A 14 NLYFQGMRFLAYFG-HLNIDVLISVD-----SIP--REGSVNV--------------------KDLRPRFGGTAGNFAIV 65 (306)
T ss_dssp -----CCEEEEEEC-CCEEEEEEECS-----CCC--SSEEEEC--------------------SEEEEEEEHHHHHHHHH
T ss_pred ceeccCCCcEEEEC-CceEEEEEecC-----CCC--CCceEEC--------------------cceEecCCChHHHHHHH
Confidence 34456778999999 99999999985 454 3332211 14678999999999999
Q ss_pred HHhhcCCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEEEcCCCceeeecccccccCCCcccCCccc
Q 018120 89 LSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAED 167 (360)
Q Consensus 89 la~~lG~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~ 167 (360)
|++ ||.++.++|.+|+| +|+++++.|++.||+++++...++ +|+.+++++++ |+|+++.+.++...++ +++.
T Consensus 66 la~-LG~~~~~i~~vG~D-~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~-g~r~~~~~~ga~~~~~-~~l~--- 138 (306)
T 3bf5_A 66 AQK-FRIPFDLYSAVGMK-THREYLAMIESMGINTGHVEKFEDESGPICYIATDG-KKQVSFMHQGAMAAWA-PQLA--- 138 (306)
T ss_dssp HHH-TTCCCEEEEEEETT-TCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECS-SCEEEEEECTHHHHCC-CCCC---
T ss_pred HHH-cCCCeEEEEEEeCC-hHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcC-CeeEEEEeCChhhhhh-Hhhc---
Confidence 999 99999999999999 999999999999999999865554 79999999987 9999887777665555 4442
Q ss_pred cCCCcEEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCCCc
Q 018120 168 VKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEENAD 247 (360)
Q Consensus 168 ~~~~~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~~~ 247 (360)
.+++++|++... .+.++++.+++ ++++|++.... ...++.+.++++ ++|++++|++|+..|++....+.
T Consensus 139 -~~~~~v~~~~~~----~~~~~~~~a~~---~v~~D~~~~~~-~~~~~~~~~~l~--~~dil~~N~~E~~~l~g~~~~~~ 207 (306)
T 3bf5_A 139 -DEYEYVHFSTGP----NYLDMAKSIRS---KIIFDPSQEIH-KYSKDELKKFHE--ISYMSIFNDHEYRVFREMTGLSS 207 (306)
T ss_dssp -SCEEEEEECSSS----SHHHHHHHCCS---EEEECCGGGGG-GSCHHHHHHHHH--HCSEEEEEHHHHHHHHHHHCCSS
T ss_pred -CCCCEEEECChH----HHHHHHHHhCC---cEEEcCchhhh-hccHHHHHHHHh--cCCEEEcCHHHHHHHhCCCCcCc
Confidence 688999998332 56667777664 99999974211 112456677887 89999999999999987432111
Q ss_pred HHHHHHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHHHHhcc
Q 018120 248 SEAALEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVGSCSGGS 327 (360)
Q Consensus 248 ~~~~~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~~aaa~ 327 (360)
. + . .|+||+|++|++++++++.+++|+++ ++ +|||||||+|+|||++++++|+++++|+++|+++|+.
T Consensus 208 ~----~-----l-~vvvT~G~~Ga~~~~~~~~~~~~~~~-v~-vDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~~aa~ 275 (306)
T 3bf5_A 208 P----K-----V-TTIVTNGERGSSLFMDGKKYDFPAIP-SS-GDTVGAGDSFRAGLYLALYNRRSIEKGMIYGTIIAHH 275 (306)
T ss_dssp C----S-----S-CEEEEEGGGEEEEEETTEEEEEECCC-CC-SCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred c----c-----E-EEEEeecccCeEEEeCCcEEEecCCc-CC-CCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 0 1 1 19999999999999999999999985 67 9999999999999999999999999999999999999
Q ss_pred hhcc--cCCccCcccHHHHHHHHHHc
Q 018120 328 VIRS--LGGEVTPENWQWMRKQMQIR 351 (360)
Q Consensus 328 ~v~~--~G~~~~~~~~~~~~~~~~~~ 351 (360)
++++ .|+....++.++++++++..
T Consensus 276 ~v~~~~~G~~~~~p~~~ev~~~~~~~ 301 (306)
T 3bf5_A 276 VIDDGIENFSLNMEDLERETENYRRM 301 (306)
T ss_dssp HHHHCSTTCCCCHHHHHHHHHHHHHH
T ss_pred HhccCCccccccCCCHHHHHHHHHhh
Confidence 9999 99988889999999888753
No 40
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=100.00 E-value=3.4e-42 Score=318.20 Aligned_cols=288 Identities=17% Similarity=0.219 Sum_probs=229.8
Q ss_pred eEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCCc
Q 018120 17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP 96 (360)
Q Consensus 17 ~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~~ 96 (360)
.++++| ++++|+++.++ ++ ..|+.... ......+||+++|+|++|++ ||.+
T Consensus 22 i~~v~G-~~~~D~~~~~~-----~~--~~g~~~~~--------------------~~~~~~~GG~~~NvA~~la~-LG~~ 72 (330)
T 2jg1_A 22 ILTLTL-NPSVDISYPLT-----AL--KLDDVNRV--------------------QEVSKTAGGKGLNVTRVLAQ-VGEP 72 (330)
T ss_dssp EEEEES-SCEEEEEEEES-----CC--CTTSEEEE--------------------SCCEEEEECHHHHHHHHHHH-HTCC
T ss_pred EEEEec-chhheEEEecC-----Cc--cCCceEEe--------------------ceEEEcCCchHHHHHHHHHH-hCCC
Confidence 455788 99999999986 33 34443322 25788999999999999999 9999
Q ss_pred eEEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeecccccccCCCcccCCc------cccCC
Q 018120 97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA------EDVKG 170 (360)
Q Consensus 97 v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~------~~~~~ 170 (360)
+.++|.+|+ ++|+++++.|++.||+++++...+ .|+.++++++++ +++++...++ .+++++++. +.+++
T Consensus 73 ~~~i~~vG~-~~G~~l~~~L~~~gV~~~~v~~~~-~t~~~~~~v~~~-~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~ 147 (330)
T 2jg1_A 73 VLASGFIGG-ELGQFIAKKLDHADIKHAFYNIKG-ETRNCIAILHEG-QQTEILEQGP--EIDNQEAAGFIKHFEQMMEK 147 (330)
T ss_dssp EEEEEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEEEETT-EEEEEEECCC--BCCHHHHHHHHHHHHHHGGG
T ss_pred eEEEEEecc-hhHHHHHHHHHHCCCceeEEEccC-CCeeEEEEEeCC-CcEEEECCCC--CCCHHHHHHHHHHHHHhcCC
Confidence 999999996 799999999999999999988754 588888888866 6665544332 455554432 23678
Q ss_pred CcEEEEeec---ccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhcc-CCccEEEcCHHHHHHhhcCCCC-
Q 018120 171 SKWLVLRFG---MFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLES-GDVDLCFANEDEAAELVRGEEN- 245 (360)
Q Consensus 171 ~~~v~~~~~---~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~-~~~dil~~n~~E~~~l~~~~~~- 245 (360)
+|++++++. ..+.+.+.++++.++++|++++||++. +.+.+++++ .++|++++|++|+..|++....
T Consensus 148 ~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~ 219 (330)
T 2jg1_A 148 VEAVAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSG--------ATLQTVLENPYKPTVIKPNISELYQLLNQPLDE 219 (330)
T ss_dssp CSEEEEESCCCBTSCTTHHHHHHHHHHTTTCCEEEECCH--------HHHHHHHTSSSCCSEECCBHHHHHHHTTSCCCC
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCc--------HHHHHHHhccCCceEEEeCHHHHHHHhCCCCCC
Confidence 999999722 134578899999999999999999974 234444431 1699999999999999986422
Q ss_pred --CcHHHHHH-HHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHH
Q 018120 246 --ADSEAALE-FLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVGS 322 (360)
Q Consensus 246 --~~~~~~~~-~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~ 322 (360)
++..++.+ ++..+++.|+||+|++|++++++++.+++|+++ ++++|||||||+|+|||+++|++|+++++|+++|+
T Consensus 220 ~~~~~~~~~~~l~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~-v~vvDttGAGDaF~ag~~~~l~~g~~l~~al~~A~ 298 (330)
T 2jg1_A 220 SLESLKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPT-ISVLNPVGSGDSTVAGITSAILNHENDHDLLKKAN 298 (330)
T ss_dssp CHHHHHHHHHSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCC-CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeecCCceEEEeCCCEEEEeCCC-ccccCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 23333333 445578999999999999999999999999984 78999999999999999999999999999999999
Q ss_pred HHhcchhcccCCccCcccHHHHHHHHH
Q 018120 323 CSGGSVIRSLGGEVTPENWQWMRKQMQ 349 (360)
Q Consensus 323 ~aaa~~v~~~G~~~~~~~~~~~~~~~~ 349 (360)
++|+.+|++.|+. .++.++++++++
T Consensus 299 a~aa~~v~~~G~~--~~~~~ev~~~~~ 323 (330)
T 2jg1_A 299 TLGMLNAQEAQTG--YVNLNNYDDLFN 323 (330)
T ss_dssp HHHHHHHTSSSSS--CCCGGGHHHHHT
T ss_pred HHHHHHhcCcCCC--CCCHHHHHHHHh
Confidence 9999999999985 567777777765
No 41
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=100.00 E-value=5.4e-42 Score=316.06 Aligned_cols=290 Identities=19% Similarity=0.241 Sum_probs=232.7
Q ss_pred eEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCCc
Q 018120 17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP 96 (360)
Q Consensus 17 ~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~~ 96 (360)
.|+++| ++++|+++.++ + + ..|+..... .....+||++.|+|++|++ ||.+
T Consensus 4 ~i~v~g-~~~~D~~~~v~-----~-~-~~g~~~~~~--------------------~~~~~~GG~~~NvA~~la~-LG~~ 54 (323)
T 2f02_A 4 IVTVTM-NPSIDISYLLD-----H-L-KLDTVNRTS--------------------QVTKTPGGKGLNVTRVIHD-LGGD 54 (323)
T ss_dssp EEEEES-SCEEEEEEECS-----C-C-CTTSEEEES--------------------CEEEEEESHHHHHHHHHHH-HTCC
T ss_pred EEEEec-CceeEEEEecC-----C-c-ccCCEEEec--------------------eEEEcCCcHHHHHHHHHHH-cCCC
Confidence 699999 99999999996 3 2 344443322 5788999999999999999 9999
Q ss_pred eEEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeecccccccCCCcccCCc------cccCC
Q 018120 97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA------EDVKG 170 (360)
Q Consensus 97 v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~------~~~~~ 170 (360)
+.++|.+|+ ++|+++++.|++.||+++++...+ +|+.++++++++ +++++...++ .+++++++. +.+++
T Consensus 55 ~~~~~~vG~-~~G~~i~~~L~~~gV~~~~v~~~~-~t~~~~~~~~~~-~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~~ 129 (323)
T 2f02_A 55 VIATGVLGG-FHGAFIANELKKANIPQAFTSIKE-ETRDSIAILHEG-NQTEILEAGP--TVSPEEISNFLENFDQLIKQ 129 (323)
T ss_dssp EEEEEEEEH-HHHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEETT-EEEEEEECCC--BCCHHHHHHHHHHHHHHHTT
T ss_pred eEEEEEecc-chHHHHHHHHHHCCCceeEEEcCC-CCeeEEEEEcCC-CeEEEECCCC--CCCHHHHHHHHHHHHHhccC
Confidence 999999997 699999999999999999987754 588888888866 6665544333 455554432 23588
Q ss_pred CcEEEEeecc---cCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhcc-CCccEEEcCHHHHHHhhcCCCC-
Q 018120 171 SKWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLES-GDVDLCFANEDEAAELVRGEEN- 245 (360)
Q Consensus 171 ~~~v~~~~~~---~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~-~~~dil~~n~~E~~~l~~~~~~- 245 (360)
+|++++++.. .+.+.+.++++.+++.+.++++||++. .+.+++++ .++|++++|++|+..|++....
T Consensus 130 ~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~--------~~~~~l~~~~~~dil~~N~~E~~~l~g~~~~~ 201 (323)
T 2f02_A 130 AEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGD--------SLRQVLQGPWKPYLIKPNLEELEGLLGQDFSE 201 (323)
T ss_dssp CSEEEEESCCCBTSCTTHHHHHHHHHHHTTCEEEEECCTH--------HHHHHHHSSCCCSEECCBHHHHHHHHTCCCCS
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHHHCCCEEEEECChH--------HHHHHHhccCCCeEEecCHHHHHHHhCCCCCC
Confidence 9999997221 245788999999999999999999752 23333320 1799999999999999986422
Q ss_pred ---CcHHHHH-HHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHH
Q 018120 246 ---ADSEAAL-EFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVG 321 (360)
Q Consensus 246 ---~~~~~~~-~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a 321 (360)
++..++. +++..+++.|+||+|++|++++++++.+++|+++ ++++|||||||+|+|||++++++|+++++|+++|
T Consensus 202 ~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A 280 (323)
T 2f02_A 202 NPLAAVQTALTKPMFAGIEWIVISLGKDGAIAKHHDQFYRVKIPT-IQAKNPVGSGDATIAGLAYGLAKDAPAAELLKWG 280 (323)
T ss_dssp SCHHHHHHHHTSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCC-CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEeecCCceEEEeCCCEEEEcCCC-ccccCCccHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 2333333 3445578999999999999999999999999984 7899999999999999999999999999999999
Q ss_pred HHHhcchhcccCCccCcccHHHHHHHHHHc
Q 018120 322 SCSGGSVIRSLGGEVTPENWQWMRKQMQIR 351 (360)
Q Consensus 322 ~~aaa~~v~~~G~~~~~~~~~~~~~~~~~~ 351 (360)
+++|+.+|++.|+. .++.++++++++..
T Consensus 281 ~~~aa~~v~~~G~~--~~~~~ev~~~~~~~ 308 (323)
T 2f02_A 281 MAAGMANAQERMTG--HVDVENVKKHLMNI 308 (323)
T ss_dssp HHHHHHHHHSSSSS--CCCHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCcC--CCCHHHHHHHhhcE
Confidence 99999999999985 67888888887644
No 42
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=1.1e-42 Score=321.61 Aligned_cols=295 Identities=16% Similarity=0.193 Sum_probs=234.9
Q ss_pred CCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhc
Q 018120 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (360)
Q Consensus 14 ~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~l 93 (360)
..-.|+++| ++++|+++.++ + + ..|+....+ ++......+||+++|+|++|++ |
T Consensus 11 ~~~~~~v~G-~~~vD~~~~~~-----~-~-~~g~~~~~s-----------------~~~~~~~~~GG~~~NvA~~la~-L 64 (331)
T 2ajr_A 11 HHMVLTVTL-NPALDREIFIE-----D-F-QVNRLYRIN-----------------DLSKTQMSPGGKGINVSIALSK-L 64 (331)
T ss_dssp -CCEEEEES-SCEEEEEEECT-----T-C-CSSCEEECC-----------------SGGGEEEEEESHHHHHHHHHHH-T
T ss_pred cceEEEEec-chHHeEEEEcC-----C-c-cCCceEEec-----------------cccceEEecCcHHHHHHHHHHH-c
Confidence 456799999 99999999996 3 2 444433321 0125789999999999999999 9
Q ss_pred CCceEEEEeecCChhHHHHHHHHHhCC--CeeceeeecCCCCeeEEEEEcCCCce-eeecccccccCCCcccCCc-----
Q 018120 94 GVPCGLIGAYGDDQQGQLFVSNMQFSG--VDVSRLRMKRGPTGQCVCLVDASGNR-TMRPCLSNAVKIQADELIA----- 165 (360)
Q Consensus 94 G~~v~~ig~vG~D~~g~~i~~~l~~~g--v~~~~i~~~~~~t~~~~~~~~~~g~r-~~~~~~~~~~~~~~~~~~~----- 165 (360)
|.++.++|.+|+| +|+++++.|++.| |+++++...+ +|+.++++++++|+| +++...++ .+++++++.
T Consensus 65 G~~~~~~~~vG~d-~G~~i~~~L~~~g~~V~~~~v~~~~-~t~~~~~~v~~~g~~~~~~~~~g~--~l~~~~~~~~~~~~ 140 (331)
T 2ajr_A 65 GVPSVATGFVGGY-MGKILVEELRKISKLITTNFVYVEG-ETRENIEIIDEKNKTITAINFPGP--DVTDMDVNHFLRRY 140 (331)
T ss_dssp TCCEEEEEEEEHH-HHHHHHHHHHHHCTTEEEEEEEESS-CCEEEEEEEETTTTEEEEEECCCC--CCCHHHHHHHHHHH
T ss_pred CCCeEEEEEecCc-hHHHHHHHHHHcCCccceEEEEcCC-CCeEEEEEEeCCCceEEEEeCCCC--CCCHHHHHHHHHHH
Confidence 9999999999998 9999999999999 9999988754 588888888878888 65544443 355554432
Q ss_pred -cccCCCcEEEEeecc---cCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhcc-CCccEEEcCHHH-HHHh
Q 018120 166 -EDVKGSKWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLES-GDVDLCFANEDE-AAEL 239 (360)
Q Consensus 166 -~~~~~~~~v~~~~~~---~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~-~~~dil~~n~~E-~~~l 239 (360)
+.+.++|++++++.. .+.+.+.++++.+++.|++++|||+. +.+.+++++ .++|++++|++| +..|
T Consensus 141 ~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~~~~~l~~~~~~dil~~N~~E~~~~l 212 (331)
T 2ajr_A 141 KMTLSKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQTP--------RLLERIYEGPEFPNVVKPDLRGNHASF 212 (331)
T ss_dssp HHHHTTCSEEEEESCCCTTSCTTHHHHHHHHHHHTTCEEEEECCH--------HHHHHHHHSSCCCSEECCCCTTCCSCB
T ss_pred HHhcccCCEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCh--------HHHHHHHhcCCCCeEEEeCccchHHHH
Confidence 246889999998322 23578899999999999999999974 224444441 148999999999 9988
Q ss_pred hcCCCC--CcHHH-HHHHHHcCCCEEEEEeCCCceEEEECCEEEEeC-CcCCCcccCCCCccHHhHHHHHHHHH-cCCCH
Q 018120 240 VRGEEN--ADSEA-ALEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVP-AIGEAKAIDATGAGDLFASGFLYGLV-KGLSL 314 (360)
Q Consensus 240 ~~~~~~--~~~~~-~~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~-~~~~~~vvdttGAGD~f~ag~~~~l~-~~~~l 314 (360)
++.... ++..+ +.+++.. .+.|+||+|++|++++++++.+++| ++ .++++|||||||+|+|||+++|+ +|+++
T Consensus 213 ~g~~~~~~~~~~~~~~~l~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~-~v~vvDttGAGDaF~ag~l~~l~~~g~~~ 290 (331)
T 2ajr_A 213 LGVDLKTFDDYVKLAEKLAEK-SQVSVVSYEVKNDIVATREGVWLIRSKE-EIDTSHLLGAGDAYVAGMVYYFIKHGANF 290 (331)
T ss_dssp TTBCCCSHHHHHHHHHHHHHH-SSEEEEEETTTEEEEECSSCEEEEEESS-CCCGGGCTTHHHHHHHHHHHHHHHHCSCH
T ss_pred hCCCCCCHHHHHHHHHHHHHh-cCEEEEeecCCceEEEeCCcEEEEecCC-cccccCCCchHHHHHHHHHHHHHHcCCCH
Confidence 875422 12333 3445556 8999999999999999888888999 87 47899999999999999999999 99999
Q ss_pred HHHHHHHHHHhcchhcccCCccCcccHHHHHHHHHH
Q 018120 315 EECCKVGSCSGGSVIRSLGGEVTPENWQWMRKQMQI 350 (360)
Q Consensus 315 ~~a~~~a~~aaa~~v~~~G~~~~~~~~~~~~~~~~~ 350 (360)
++|+++|+++|+.+|++.|+. .++.++++++++.
T Consensus 291 ~~al~~A~a~aa~~v~~~G~~--~~~~~ev~~~~~~ 324 (331)
T 2ajr_A 291 LEMAKFGFASALAATRRKEKY--MPDLEAIKKEYDH 324 (331)
T ss_dssp HHHHHHHHHHHHHHTTSSSCC--CCCHHHHHTTGGG
T ss_pred HHHHHHHHHHHHHHHcCcCcC--CCCHHHHHHHHhh
Confidence 999999999999999999984 6788888887764
No 43
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=100.00 E-value=1.5e-41 Score=316.70 Aligned_cols=303 Identities=17% Similarity=0.168 Sum_probs=227.9
Q ss_pred CCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhc
Q 018120 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (360)
Q Consensus 14 ~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~l 93 (360)
-+.+|++|| .+++|+....+ -+ +.+...+...+||+++|+|++|++ |
T Consensus 23 mm~kv~~~G-E~m~~l~p~~~------~~-------------------------~~~~~~~~~~~GG~~aNvA~~lar-L 69 (351)
T 4gm6_A 23 MMKQVVTIG-ELLMRLSTQQG------IP-------------------------FSQTTALDIHIGGAEANVAVNLSK-L 69 (351)
T ss_dssp --CEEEEEC-CCEEEEECCTT------CC-------------------------GGGCSEEEEEEECHHHHHHHHHHH-T
T ss_pred ccCCEEEEc-ceeEEecCCCC------CC-------------------------ccccCeEEEecCChHHHHHHHHHH-c
Confidence 346899999 99999865432 11 111235789999999999999999 9
Q ss_pred CCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEE-cCCCceeeecccc--cccCCCcccCC-ccccC
Q 018120 94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLV-DASGNRTMRPCLS--NAVKIQADELI-AEDVK 169 (360)
Q Consensus 94 G~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~-~~~g~r~~~~~~~--~~~~~~~~~~~-~~~~~ 169 (360)
|.++.++|.||+|.+|+++++.|++.||+++++...+.+++.+++.. +..+++.+..+.. +...+...+++ .+.++
T Consensus 70 G~~~~~ig~vG~D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~~~~~~~ 149 (351)
T 4gm6_A 70 GHPTRIATVVPANPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWDLSELLK 149 (351)
T ss_dssp TCCEEEEEEECSSHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCCHHHHHT
T ss_pred CCCeEEEEEeCCCHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccCHHHHHh
Confidence 99999999999999999999999999999999988777655555544 3445555543332 22234444444 35688
Q ss_pred CCcEEEEeec--cc---CHHHHHHHHHHHHHCCCeEEEeCCChh---HHHhhhHHHHHhhccCCccEEEcCHHHHHHhhc
Q 018120 170 GSKWLVLRFG--MF---NFEVIQAAIRIAKQEGLSVSMDLASFE---MVRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241 (360)
Q Consensus 170 ~~~~v~~~~~--~~---~~~~~~~~~~~a~~~~~~v~~d~~~~~---~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~ 241 (360)
+++++|+++. .. +.+.+.++++.|+++|++|+|||+... ..+..++.+.++++ ++|++++|++|+..+++
T Consensus 150 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l~--~~dil~~N~~Ea~~l~g 227 (351)
T 4gm6_A 150 GIRVLHVSGITIALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLLP--LVDYCSAGQMDAVAFFE 227 (351)
T ss_dssp TEEEEEEEHHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHGG--GCSEEECCHHHHHHTSC
T ss_pred hcccceecccchhhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHHH--hCCccccCHHHHHHHhC
Confidence 9999999821 12 247788999999999999999996321 22345667778888 89999999999999998
Q ss_pred CCCC-CcHHHH-HHHHHc-----CCCEEEEEeC--CCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCC
Q 018120 242 GEEN-ADSEAA-LEFLAK-----RCQWAVVTLG--PNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGL 312 (360)
Q Consensus 242 ~~~~-~~~~~~-~~~l~~-----~~~~vivt~G--~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~ 312 (360)
.... .+...+ .+.... +.+.++++.+ ..+..++++++.++.++++..+++|||||||+|+|||+++|++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~VvDttGAGDaF~ag~l~~l~~g~ 307 (351)
T 4gm6_A 228 ISSETTDYYQAMHDKYPNIELFYATKRTVISASHHLLQGHLWTQGECWESEEYAIYPIVDRVGGGDAYTAAVLHGILSEW 307 (351)
T ss_dssp CCTTCSCHHHHHHHHCTTCCEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECSCSCCTTHHHHHHHHHHHHHHTTC
T ss_pred CCCchhHHHHHHHhhhhhhhhhhccccceeeeccCCceEEEEeCCceEEeCCCCCCCcCCCCChhHHHHHHHHHHHHCCC
Confidence 6532 222222 222211 1233455544 446778889999999988767899999999999999999999999
Q ss_pred CHHHHHHHHHHHhcchhcccCCccCcccHHHHHHHHHHcC
Q 018120 313 SLEECCKVGSCSGGSVIRSLGGEVTPENWQWMRKQMQIRG 352 (360)
Q Consensus 313 ~l~~a~~~a~~aaa~~v~~~G~~~~~~~~~~~~~~~~~~~ 352 (360)
++++|+++|+++|+.+|++.|+...++. ++++++++.++
T Consensus 308 ~~~~al~~A~aaaal~v~~~Ga~~~~~~-~ev~~~l~~~~ 346 (351)
T 4gm6_A 308 RPDETVKFATAAAGLKHSIHGDINPFDE-KTIADFAADKS 346 (351)
T ss_dssp CHHHHHHHHHHHHHHHTTSSSSSCCCCH-HHHHHHHHC--
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHhCCC
Confidence 9999999999999999999998877664 78999998654
No 44
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=100.00 E-value=1.5e-42 Score=322.96 Aligned_cols=295 Identities=18% Similarity=0.175 Sum_probs=226.2
Q ss_pred ccccCCCeEEEecCCeeEEEEee--cCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHH
Q 018120 10 REASQAALILGLQPAALIDHVAR--VDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIR 87 (360)
Q Consensus 10 ~~~~~~~~i~~iG~~~~lD~i~~--~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~ 87 (360)
....+..+|+++| +.++|++.. ++. +..+.|.+. .+.......+||+ +|+|+
T Consensus 48 ~~~~~~~~ilvvG-~~~~D~~~~g~v~r-~~p~~p~~~-----------------------~~~~~~~~~~GG~-~NvA~ 101 (352)
T 4e84_A 48 REQLARSRVLVVG-DVMLDRYWFGNVDR-ISPEAPVPV-----------------------VHVQRQEERLGGA-ANVAR 101 (352)
T ss_dssp HHHHTTCEEEEEE-CEEEEEEEEEEEEE-ECSSSSSEE-----------------------EEEEEEEEEEEEH-HHHHH
T ss_pred HHhcCCCcEEEEC-ccceEEEEeecccc-cCCCCCcce-----------------------EEeeEEEEecChH-HHHHH
Confidence 3456778999999 999999987 320 000112110 0112477899997 89999
Q ss_pred HHHhhcCCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeeccc-ccccCCCcccCC--
Q 018120 88 GLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL-SNAVKIQADELI-- 164 (360)
Q Consensus 88 ~la~~lG~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~-~~~~~~~~~~~~-- 164 (360)
+|++ ||.++.++|.||+|.+|+.+++.|++.||++..+...+.+|+.++++++.++++..+... +.......+.++
T Consensus 102 ~la~-LG~~v~~ig~vG~D~~G~~i~~~L~~~GV~~~~~~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (352)
T 4e84_A 102 NAVT-LGGQAGLLCVVGCDEPGERIVELLGSSGVTPHLERDPALPTTIKLRVLARQQQLLRVDFEAMPTHEVLLAGLARF 180 (352)
T ss_dssp HHHH-TTCEEEEEEEEESSHHHHHHHHHHTTTSCEEEEEEETTSCCCEEEEEEESSCEEEEEEECCCCCHHHHHHHHHHH
T ss_pred HHHH-cCCCEEEEEEeCCChhHHHHHHHHHHcCCceeeEECCCCCCceEEEEEcCCceEEEEEcCCCCCHHHHHHHHHHH
Confidence 9999 999999999999999999999999999999965555455899999998866554433222 111111111111
Q ss_pred ccccCCCcEEEEe-ecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCC
Q 018120 165 AEDVKGSKWLVLR-FGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGE 243 (360)
Q Consensus 165 ~~~~~~~~~v~~~-~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~ 243 (360)
.+.++++|+++++ +...+.+.+.++++.++++|+++++|++.. ++++++ ++|++++|++|++.+++..
T Consensus 181 ~~~l~~~~~v~~~g~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~---------~~~~l~--~~dil~pN~~Ea~~l~g~~ 249 (352)
T 4e84_A 181 DVLLPQHDVVLMSDYAKGGLTHVTTMIEKARAAGKAVLVDPKGD---------DWARYR--GASLITPNRAELREVVGQW 249 (352)
T ss_dssp HHHGGGCSEEEEECCSSSSCSSHHHHHHHHHHTTCEEEEECCSS---------CCSTTT--TCSEECCBHHHHHHHHCCC
T ss_pred HHhcccCCEEEEeCCCCCCHHHHHHHHHHHHhcCCEEEEECCCc---------chhhcc--CCcEEcCCHHHHHHHhCCC
Confidence 2457899999998 333334458889999999999999999752 234666 8999999999999999832
Q ss_pred C-CCcHHHHHH-HHH-cCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHH
Q 018120 244 E-NADSEAALE-FLA-KRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKV 320 (360)
Q Consensus 244 ~-~~~~~~~~~-~l~-~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~ 320 (360)
. .++..++.+ ++. .+++.|+||+|++|++++++++.+++|++ .++++|||||||+|+|||+++|++|+++++|+++
T Consensus 250 ~~~~~~~~~a~~l~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~pa~-~v~vvDttGAGDaF~ag~l~~l~~g~~l~~al~~ 328 (352)
T 4e84_A 250 KSEDDLRARVANLRAELDIDALLLTRSEEGMTLFSAGGELHAPAL-AREVFDVSGAGDTVIATVATMLGAGVPLVDAVVL 328 (352)
T ss_dssp SSHHHHHHHHHHHHHHHTCSEEEEECGGGCEEEEETTEEEEECCC-CSCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEEcCCCcEEEEECCceEEecCC-CcCccCCccccHHHHHHHHHHHHcCCCHHHHHHH
Confidence 1 123334444 443 48899999999999999999999999999 4889999999999999999999999999999999
Q ss_pred HHHHhcchhcccCCccCcccHHHHH
Q 018120 321 GSCSGGSVIRSLGGEVTPENWQWMR 345 (360)
Q Consensus 321 a~~aaa~~v~~~G~~~~~~~~~~~~ 345 (360)
|+++|+.+|++.|+.. ++.+|++
T Consensus 329 A~aaaa~~v~~~Ga~~--~t~~el~ 351 (352)
T 4e84_A 329 ANRAAGIVVGKLGTAT--VDYDELF 351 (352)
T ss_dssp HHHHHHHHHTSSSSCC--CCHHHHT
T ss_pred HHHHHHHHhcCCCCcc--CCHHHhc
Confidence 9999999999999885 3666664
No 45
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=100.00 E-value=6.9e-41 Score=306.41 Aligned_cols=287 Identities=19% Similarity=0.223 Sum_probs=229.7
Q ss_pred EEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCCceE
Q 018120 19 LGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCG 98 (360)
Q Consensus 19 ~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~~v~ 98 (360)
.+.| |+++|+++.++ ++ ..|+.... ......+||++.|+|++|++ ||.++.
T Consensus 4 tv~~-n~~~D~~~~~~-----~~--~~g~~~~~--------------------~~~~~~~GG~~~N~A~~la~-LG~~~~ 54 (306)
T 2abq_A 4 TVTL-NPSIDYIVQVE-----NF--QQGVVNRS--------------------ERDRKQPGGKGINVSRVLKR-LGHETK 54 (306)
T ss_dssp EEES-SCEEEEEEECT-----TC--CSSSEEEC--------------------SEEEEEEECHHHHHHHHHHH-TTCCCE
T ss_pred EEec-CchheEEEEcC-----Cc--ccCCeEEe--------------------ceeEecCCchHHHHHHHHHH-cCCCce
Confidence 4455 99999999996 33 34443332 24788999999999999999 999999
Q ss_pred EEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeecccccccCCCcccCCc--cc---cCCCcE
Q 018120 99 LIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--ED---VKGSKW 173 (360)
Q Consensus 99 ~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~--~~---~~~~~~ 173 (360)
++|.+|+ .+|+++++.|++.||+++++...+ +|+.++++ .+|+|+++...++ .+++++++. +. ++++|+
T Consensus 55 ~~~~vG~-~~g~~i~~~L~~~gv~~~~v~~~~-~t~~~~~~--~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~ 128 (306)
T 2abq_A 55 ALGFLGG-FTGAYVRNALEKEEIGLSFIEVEG-DTRINVKI--KGKQETELNGTAP--LIKKEHVQALLEQLTELEKGDV 128 (306)
T ss_dssp EEEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEE--ESSSCEEEBCCCC--CCCHHHHHHHHHHHTTCCTTCE
T ss_pred EEEEecc-hhHHHHHHHHHHcCCceEEEEcCC-CCceEEEE--eCCceEEEECCCC--CCCHHHHHHHHHHHHhccCCCE
Confidence 9999998 899999999999999999988754 57877776 4788876544443 455554432 11 578999
Q ss_pred EEEeecc---cCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCC--CcH
Q 018120 174 LVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEEN--ADS 248 (360)
Q Consensus 174 v~~~~~~---~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~--~~~ 248 (360)
+|+++.. .+.+.+.++++.++++|.++++||++ +.+.+++++ ++|++++|++|+..|++.... ++.
T Consensus 129 v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~~~~~l~~-~~dil~~N~~E~~~l~g~~~~~~~~~ 199 (306)
T 2abq_A 129 LVLAGSVPQAMPQTIYRSMTQIAKERGAFVAVDTSG--------EALHEVLAA-KPSFIKPNHHELSELVSKPIASIEDA 199 (306)
T ss_dssp EEEESCCCTTSCTTHHHHHHHHHHTTTCEEEEECCH--------HHHHHHGGG-CCSEECCBHHHHHHHHTSCCCSHHHH
T ss_pred EEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEECCh--------HHHHHHHhc-CCcEEecCHHHHHHHhCCCCCCHHHH
Confidence 9997221 24578899999999999999999973 234556653 689999999999999986422 223
Q ss_pred HHH-HHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHHHHhcc
Q 018120 249 EAA-LEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVGSCSGGS 327 (360)
Q Consensus 249 ~~~-~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~~aaa~ 327 (360)
.++ .+++..+.+.|+||+|++|++++++++.+++|+++ .+++|||||||+|+|||++++++|+++++|+++|+++|+.
T Consensus 200 ~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~a~aa~ 278 (306)
T 2abq_A 200 IPHVQRLIGEGIESILVSFAGDGALFASAEGMFHVNVPS-GEVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAAGSA 278 (306)
T ss_dssp HHHHHHHHHTTCCEEEEECGGGCEEEEETTEEEEECCCC-CCCCCCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecCCCceEEEeCCCEEEEeCCC-ccccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 333 44556688999999999999999999899999984 7899999999999999999999999999999999999999
Q ss_pred hhcccCCccCcccHHHHHHHHHHcCCC
Q 018120 328 VIRSLGGEVTPENWQWMRKQMQIRGLP 354 (360)
Q Consensus 328 ~v~~~G~~~~~~~~~~~~~~~~~~~~~ 354 (360)
+|++. +.++.++++++++...+.
T Consensus 279 ~v~~~----~~p~~~ev~~~~~~~~~~ 301 (306)
T 2abq_A 279 TAFSD----GFCTREEVERLQQQLQRT 301 (306)
T ss_dssp HHHSS----SCCCHHHHHHHHHHHTTC
T ss_pred HhcCc----CCCCHHHHHHHHhhEEEE
Confidence 99998 466788888888766553
No 46
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=9.4e-41 Score=311.32 Aligned_cols=272 Identities=17% Similarity=0.209 Sum_probs=220.5
Q ss_pred CceEecCchHHHHHHHHHhhcCCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCce-eeecc
Q 018120 73 PIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNR-TMRPC 151 (360)
Q Consensus 73 ~~~~~~GG~a~N~a~~la~~lG~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r-~~~~~ 151 (360)
.....+||+++|+|++|++ ||.++.++|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++.++. ++| +++.+
T Consensus 38 ~~~~~~GG~~~NvA~~la~-LG~~~~~i~~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~t~~~~v~~~~-~~r~~~v~~ 115 (351)
T 2afb_A 38 SFDVTYGGAEANVAAFLAQ-MGLDAYFVTKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGA-SQRPSKVVY 115 (351)
T ss_dssp EEEEEEECHHHHHHHHHHH-TTSEEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCEEEEECCB-TTBCCEEEE
T ss_pred eeeEecCChHHHHHHHHHH-cCCCeEEEEEeCCCHHHHHHHHHHHHcCCcceeEEECCCcceEEEEEecC-CCCcceEEE
Confidence 4778999999999999999 99999999999999999999999999999999998755589988887764 444 33332
Q ss_pred c---ccccCCCcccCCcc-ccCCCcEEEEe-ecc-cC---HHHHHHHHHHHHHCCCeEEEeCCChhH---HHhhhHHHHH
Q 018120 152 L---SNAVKIQADELIAE-DVKGSKWLVLR-FGM-FN---FEVIQAAIRIAKQEGLSVSMDLASFEM---VRNFRTPLLQ 219 (360)
Q Consensus 152 ~---~~~~~~~~~~~~~~-~~~~~~~v~~~-~~~-~~---~~~~~~~~~~a~~~~~~v~~d~~~~~~---~~~~~~~l~~ 219 (360)
. .+...++++++... .++++|++|++ +.. ++ .+.+.++++.+++.++++++||+.... ...+++.+.+
T Consensus 116 ~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~ 195 (351)
T 2afb_A 116 DRAHSAISEAKREDFDWEKILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIP 195 (351)
T ss_dssp ECTTCTTTTCCGGGCCHHHHTTTEEEEEEETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTTTCCHHHHHHHHHH
T ss_pred eCCCChhhhCChhhCCHHHhhcCCCEEEEeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCCchhcCChHHHHHHHHH
Confidence 2 23345666666643 46899999998 221 22 378889999999999999999974211 1134466778
Q ss_pred hhccCCccEEEcCHHHHHHhhcCCCC-----------CcHHHHHH-HHHc-CCCEEEEEeCCCce--------EEEECCE
Q 018120 220 LLESGDVDLCFANEDEAAELVRGEEN-----------ADSEAALE-FLAK-RCQWAVVTLGPNGC--------IAKHGKE 278 (360)
Q Consensus 220 ~l~~~~~dil~~n~~E~~~l~~~~~~-----------~~~~~~~~-~l~~-~~~~vivt~G~~G~--------~~~~~~~ 278 (360)
+++ ++|++++|++|+..|++.... ++..++.+ ++.. +++.|+||+|++|+ +++++++
T Consensus 196 ll~--~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~ 273 (351)
T 2afb_A 196 FME--YVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGITLRESISATVNYWSVMVFENGQ 273 (351)
T ss_dssp HGG--GCSEEEECHHHHHHHHCCCCSCC-------CHHHHHHHHHHHHHHHCCSEEEEEEEECSCSSEEEEEEEEEETTE
T ss_pred HHh--hCCEEEecHHHHHHHhCCCcccccccccccchhhHHHHHHHHHHHcCCCEEEEEeCCcCccccccceeEEEeCCc
Confidence 888 899999999999999986531 12334444 4454 88999999999975 7778888
Q ss_pred EEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHHHHhcchhcccCCccCcccHHHHHHHHHH
Q 018120 279 IVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVGSCSGGSVIRSLGGEVTPENWQWMRKQMQI 350 (360)
Q Consensus 279 ~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~~aaa~~v~~~G~~~~~~~~~~~~~~~~~ 350 (360)
.+++|+++ ++++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|+.. .++.++++++++.
T Consensus 274 ~~~~~~~~-v~vvdttGAGDaF~ag~~~~l~~g~~l~~a~~~A~~~aa~~v~~~G~~~-~~~~~ev~~~l~~ 343 (351)
T 2afb_A 274 PHFSNRYE-IHIVDRVGAGDSFAGALIYGSLMGFDSQKKAEFAAAASCLKHTIPGDFV-VLSIEEIEKLASG 343 (351)
T ss_dssp EEECCCEE-EECSCCTTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTSSSSSC-CCCHHHHHHHHTC
T ss_pred EEEcCCCC-CccCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHhc
Confidence 89999984 7899999999999999999999999999999999999999999999874 7889999988864
No 47
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=100.00 E-value=1.7e-40 Score=304.69 Aligned_cols=283 Identities=19% Similarity=0.220 Sum_probs=227.6
Q ss_pred CeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCC
Q 018120 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (360)
Q Consensus 16 ~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~ 95 (360)
.+|+++| +.++|++.... + .....+||++.|+|++|++ ||.
T Consensus 3 ~~ilviG-~~~iD~~~~~~-----------~--------------------------~~~~~~GG~~~NvA~~la~-LG~ 43 (313)
T 3kd6_A 3 LSLLVIG-SLAFDDIETPF-----------G--------------------------RSDNTLGGSSTYIALSASY-FTD 43 (313)
T ss_dssp CCEEEES-CCEEEEEECSS-----------C--------------------------EEEEEEECHHHHHHHHHTT-TCS
T ss_pred ccEEEEe-EEEEeeecCCC-----------C--------------------------cccccCCCHHHHHHHHHHH-hCC
Confidence 3699999 99999996431 1 2568899999999999999 999
Q ss_pred -ceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCC-CCeeEEEE--EcCCCceeeecccccccCCCcccCCccccCCC
Q 018120 96 -PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCL--VDASGNRTMRPCLSNAVKIQADELIAEDVKGS 171 (360)
Q Consensus 96 -~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~-~t~~~~~~--~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (360)
++.++|.||+| +|+.+++.|++.||+++++...++ +|....-. .+.++++++....+....+.++ ..+.++++
T Consensus 44 ~~~~~ig~vG~D-~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 120 (313)
T 3kd6_A 44 EPIRMVGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDPH--VPQYYRDS 120 (313)
T ss_dssp SCEEEEEEEETT-SCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEECGGGTTCCCC--CCGGGTTC
T ss_pred CceEEEEecCCC-cHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecccchHhhcCcc--chHHHccC
Confidence 99999999999 999999999999999999987764 66432211 2334555555444444444443 23567899
Q ss_pred cEEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCCCcHHHH
Q 018120 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEENADSEAA 251 (360)
Q Consensus 172 ~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~~~~~~~ 251 (360)
|+++++ .++++...++++.+ +.+.++++||...+. ...++.+.++++ ++|++++|++|++.|++.. +..++
T Consensus 121 ~~v~~~--~~~~~~~~~~~~~~-~~~~~v~~Dp~~~~~-~~~~~~~~~~l~--~~dil~~N~~E~~~l~g~~---~~~~~ 191 (313)
T 3kd6_A 121 KFVCLG--NIDPELQLKVLDQI-DDPKLVVCDTMNFWI-EGKPEELKKVLA--RVDVFIVNDSEARLLSGDP---NLVKT 191 (313)
T ss_dssp SEEEEC--SSCHHHHHHHHTTC-SSCSEEEEECCHHHH-HHCHHHHHHHHT--TCSEEEEEHHHHHHHHSCS---CHHHH
T ss_pred CEEEEc--CCCHHHHHHHHHHH-hhCCEEEEcChhhhh-hhhHHHHHHHHh--cCCEEEeCHHHHHHHhCCC---CHHHH
Confidence 999997 34677777788777 578899999954332 234567788888 9999999999999999853 55555
Q ss_pred H-HHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCC-----CHHHHHHHHHHHh
Q 018120 252 L-EFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGL-----SLEECCKVGSCSG 325 (360)
Q Consensus 252 ~-~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~-----~l~~a~~~a~~aa 325 (360)
. .+++.+++.|+||+|++|++++++++.+++|+++..+++|||||||+|+|||++++++|+ ++++|+++|+++|
T Consensus 192 ~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~~~l~~a~~~a~~~a 271 (313)
T 3kd6_A 192 ARIIREMGPKTLIIKKGEHGALLFTDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLARCGNTSEAEMRKAVLYGSAMA 271 (313)
T ss_dssp HHHHHTTSCSEEEEECTTSCEEEEETTEEEEECCCTTCCCSCCTTHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEeeCCCcEEEEECCceEEeCCCCCCCcCCCCCccHHHHHHHHHHHHcCCCccccCHHHHHHHHHHHH
Confidence 4 455558899999999999999999999999999534799999999999999999999998 8999999999999
Q ss_pred cchhcccCCccC-cccHHHHHHHHH
Q 018120 326 GSVIRSLGGEVT-PENWQWMRKQMQ 349 (360)
Q Consensus 326 a~~v~~~G~~~~-~~~~~~~~~~~~ 349 (360)
+.+|++.|+... .++.++++++++
T Consensus 272 a~~v~~~G~~~~~~~~~~ev~~~l~ 296 (313)
T 3kd6_A 272 SFCVEQFGPYRYNDLDLLEVDDRYQ 296 (313)
T ss_dssp HHHTTSSTTGGGGTCCHHHHHHHHH
T ss_pred HHHHeecCCCCCCCCCHHHHHHHHH
Confidence 999999998753 468888888776
No 48
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=100.00 E-value=1.8e-40 Score=303.61 Aligned_cols=284 Identities=18% Similarity=0.207 Sum_probs=226.6
Q ss_pred EEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhhcCCce
Q 018120 18 ILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPC 97 (360)
Q Consensus 18 i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~lG~~v 97 (360)
+.+.| |+++|+++.++ ++ ..|+.... ......+||++.|+|++|++ ||.++
T Consensus 3 ~tvt~-n~~~D~~~~~~-----~~--~~g~~~~~--------------------~~~~~~~GG~~~N~A~~la~-LG~~~ 53 (306)
T 2jg5_A 3 YTVTF-NPSIDYVIFTN-----DF--KIDGLNRA--------------------TATYKFAGGKGINVSRVLKT-LDVES 53 (306)
T ss_dssp EEEES-SCEEEEEEECS-----SC--CTTSEEEC--------------------SEEEEEEESHHHHHHHHHHH-TTCCC
T ss_pred EEEec-CceEEEEEEcC-----Cc--ccCceEEe--------------------ceeEecCCchHHHHHHHHHH-cCCCe
Confidence 34556 99999999996 32 34443332 24788999999999999999 99999
Q ss_pred EEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeecccccccCCCcccCCc--cc---cCCCc
Q 018120 98 GLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--ED---VKGSK 172 (360)
Q Consensus 98 ~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~--~~---~~~~~ 172 (360)
.++|.+|+ ++|+++++.|++.||+++++...+ +|+.++++ ++|+|+++...++ .+++++++. +. ++++|
T Consensus 54 ~~~~~vG~-~~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~--~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~ 127 (306)
T 2jg5_A 54 TALGFAGG-FPGKFIIDTLNNSAIQSNFIEVDE-DTRINVKL--KTGQETEINAPGP--HITSTQFEQLLQQIKNTTSED 127 (306)
T ss_dssp EEEEEECH-HHHHHHHHHHHHTTCEECCEECSS-CCEEEEEE--ESSSEEEEECCCC--CCCHHHHHHHHHHHTTCCTTC
T ss_pred eEEEEecC-cchHHHHHHHHHCCCceeEEEcCC-CCeEEEEE--cCCCEEEEECCCC--CCCHHHHHHHHHHHHhccCCC
Confidence 99999999 799999999999999999988754 57777766 4788876655443 355554432 11 57899
Q ss_pred EEEEeecc---cCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCC--Cc
Q 018120 173 WLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEEN--AD 247 (360)
Q Consensus 173 ~v~~~~~~---~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~--~~ 247 (360)
++++++.. .+.+.+..+++.+++++.++++|++. ..+.+++++ ++|++++|++|+..|++.... ++
T Consensus 128 ~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~~~~~l~~-~~dil~~N~~E~~~l~g~~~~~~~~ 198 (306)
T 2jg5_A 128 IVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEK--------ELAESVLPY-HPLFIKPNKDELEVMFNTTVNSDAD 198 (306)
T ss_dssp EEEEESCCCTTSCTTHHHHHHHHHHHHCCEEEEECCH--------HHHHHHGGG-CCSEECCBHHHHHHHTTSCCCSHHH
T ss_pred EEEEeCCCCCCCChHHHHHHHHHHHHCCCEEEEECCh--------HHHHHHHhc-CCeEEecCHHHHHHHhCCCCCCHHH
Confidence 99998221 23578889999999999999999974 234555652 589999999999999986422 12
Q ss_pred HHHH-HHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHHHHHhc
Q 018120 248 SEAA-LEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVGSCSGG 326 (360)
Q Consensus 248 ~~~~-~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a~~aaa 326 (360)
..++ .+++..+++.|+||+|++|++++++++.+++|+++ .+++||+||||+|+|||++++++|+++++|+++|+++|+
T Consensus 199 ~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~a~aa 277 (306)
T 2jg5_A 199 VIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQ-GKVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACGT 277 (306)
T ss_dssp HHHHHHHHHHTTCSCEEEECGGGCEEEECSSEEEEEECCC-CCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEccCCCceEEEeCCcEEEEeCCc-ccccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 3333 44555688999999999999999888889999984 789999999999999999999999999999999999999
Q ss_pred chhcccCCccCcccHHHHHHHHHH
Q 018120 327 SVIRSLGGEVTPENWQWMRKQMQI 350 (360)
Q Consensus 327 ~~v~~~G~~~~~~~~~~~~~~~~~ 350 (360)
.+|++.| .++.++++++++.
T Consensus 278 ~~v~~~G----~~~~~ev~~~~~~ 297 (306)
T 2jg5_A 278 ATAFDED----LATRDAIEKIKSQ 297 (306)
T ss_dssp HHHTSSS----SCCHHHHHHHHTT
T ss_pred HHHcCCC----CCCHHHHHHHHhc
Confidence 9999999 6778888887764
No 49
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=6.4e-41 Score=305.21 Aligned_cols=257 Identities=17% Similarity=0.164 Sum_probs=202.3
Q ss_pred EecCchHHHHHHHHHhhcCCceEEEEeecCChhHHHHHHHHHhCCCeeceeeec-CCCCeeEEEEEcCCCceeeeccccc
Q 018120 76 TIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMK-RGPTGQCVCLVDASGNRTMRPCLSN 154 (360)
Q Consensus 76 ~~~GG~a~N~a~~la~~lG~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~-~~~t~~~~~~~~~~g~r~~~~~~~~ 154 (360)
..+||++.|+|++|++ ||.++.++|.+|+|.+|+.+++.|++.|| +++... +.+|+.+++.++++|+|++..+.+.
T Consensus 21 ~~~GG~~~N~A~~la~-LG~~~~~~~~vG~D~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~~ 97 (296)
T 2qhp_A 21 KKIGGAPANFAYHVSQ-FGFDSRVVSAVGNDELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEGV 97 (296)
T ss_dssp EEEECHHHHHHHHHHH-TTCEEEEEEEEESSHHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC------CCEEECSSC
T ss_pred CCCCCHHHHHHHHHHH-cCCCeeEEEEeCCChHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecCC
Confidence 6699999999999999 99999999999999999999999999999 667665 4489999998887888887655543
Q ss_pred -ccCCCcccCCccccCCCcEEEEee-ccc---CHHHHHHHHHHHHH-CCCeEEEeCCChhHHHhhhHHHHHhhccCCccE
Q 018120 155 -AVKIQADELIAEDVKGSKWLVLRF-GMF---NFEVIQAAIRIAKQ-EGLSVSMDLASFEMVRNFRTPLLQLLESGDVDL 228 (360)
Q Consensus 155 -~~~~~~~~~~~~~~~~~~~v~~~~-~~~---~~~~~~~~~~~a~~-~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~di 228 (360)
...+...+...+.++++|++|+++ ... +.+.+..+++.+++ .+.++++|+...... ...+.+.++++ ++|+
T Consensus 98 ~~~~l~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~~-~~~~~~~~~l~--~~di 174 (296)
T 2qhp_A 98 AWDNIPFTDELKRLALNTRAVCFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDF-YTKEVLRESFK--RCNI 174 (296)
T ss_dssp GGGCCCCCHHHHHHHHTEEEEEECSGGGSSHHHHHHHHHHHHHSCCTTSCEEEEECCCCTTC-CCHHHHHHHHH--HCSE
T ss_pred hhhhCCcchhhHhhhcCCCEEEECChHhcChHHHHHHHHHHHHHHhcCCCEEEEECcCCccc-cCHHHHHHHHH--HCCE
Confidence 334543322234578899999983 211 34677788888876 689999999642110 01345667777 8999
Q ss_pred EEcCHHHHHHhhcCC--CCCcHHHHHH-HHHc-CCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHH
Q 018120 229 CFANEDEAAELVRGE--ENADSEAALE-FLAK-RCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGF 304 (360)
Q Consensus 229 l~~n~~E~~~l~~~~--~~~~~~~~~~-~l~~-~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~ 304 (360)
+++|++|+..|++.. +.++.+++.+ +++. +++.|+||+|++|++++++++.+++|+++ ++++||+||||+|.|||
T Consensus 175 l~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~~vdttGAGD~f~a~~ 253 (296)
T 2qhp_A 175 LKINDEELVTISRMFGYPGIDLQDKCWILLAKYNLKMLILTCGINGSYVFTPGVVSFQETPK-VPVADTVGAGDSFTAAF 253 (296)
T ss_dssp EEEEHHHHHHHHHHTTCTTSCHHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCC-CCCSCCTTHHHHHHHHH
T ss_pred EECCHHHHHHHhcccCCCCCCHHHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCC-CccccCCCchHHHHHHH
Confidence 999999999998742 2245555544 4454 78999999999999999999999999984 78999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHhcchhcccCCccCcc
Q 018120 305 LYGLVKGLSLEECCKVGSCSGGSVIRSLGGEVTPE 339 (360)
Q Consensus 305 ~~~l~~~~~l~~a~~~a~~aaa~~v~~~G~~~~~~ 339 (360)
++++++|+++++|+++|+++|+.++++.|+....+
T Consensus 254 ~~~l~~g~~~~~a~~~a~~~aa~~v~~~G~~~~~~ 288 (296)
T 2qhp_A 254 CASILNGKSVPEAHKLAVEVSAYVCTQSGAMPELP 288 (296)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHHTSSSSSCCCC
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCCCCc
Confidence 99999999999999999999999999999886544
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=7e-39 Score=291.92 Aligned_cols=275 Identities=18% Similarity=0.122 Sum_probs=215.3
Q ss_pred cCCCeEEEecCCeeEEEEeecCHhHHhhCCCCCCCccccCHHHHHHHHhhhcccCCCCCCCceEecCchHHHHHHHHHhh
Q 018120 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (360)
Q Consensus 13 ~~~~~i~~iG~~~~lD~i~~~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~GG~a~N~a~~la~~ 92 (360)
-..-.|.++| .+..|.+.+.. .....+||+++|+|++|++
T Consensus 9 ~~~~~~~~~~-~~~~~~~~~~~--------------------------------------~~~~~~GG~~~NvA~~la~- 48 (298)
T 1vk4_A 9 HHHHMITFIG-HVSKDVNVVDG--------------------------------------KREIAYGGGVVMGAITSSL- 48 (298)
T ss_dssp CCCSEEEEEC-CCEEEEEEETT--------------------------------------EEEEEEECHHHHHHHHHHH-
T ss_pred ccceeEEEec-cccCceEeecC--------------------------------------eEEEecCCHHHHHHHHHHH-
Confidence 3445689999 89999988873 3678899999999999999
Q ss_pred cCCceEEEEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeecccccccCCCcccCCccccCCCc
Q 018120 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSK 172 (360)
Q Consensus 93 lG~~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (360)
||.++.++|.||+|. +.+++.|++.||+++++.. +.+|+.+.++ +++|++++....+++..++++++.. .+++
T Consensus 49 LG~~~~~i~~vG~D~--~~~~~~L~~~gVd~~~v~~-~~~t~~~~i~-~~~g~~~~~~~~~~~~~l~~~~~~~---~~~~ 121 (298)
T 1vk4_A 49 LGVKTKVITKCTRED--VSKFSFLRDNGVEVVFLKS-PRTTSIENRY-GSDPDTRESFLISAADPFTESDLAF---IEGE 121 (298)
T ss_dssp TTCEEEEEEEECTTT--GGGGTTTGGGTCEEEEEEC-SSCEEEEEEC------CCEEEEEECCCCCCGGGGGG---CCSS
T ss_pred cCCceEEEEEEcCCH--HHHHHHHHHcCCceEEEec-CCCcEEEEEE-cCCCCeeEEEeccccccCCHHHcCc---CCCC
Confidence 999999999999997 7788999999999998865 4456666554 5568888776777766777666533 6789
Q ss_pred EEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhH-------HHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCC
Q 018120 173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEM-------VRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEEN 245 (360)
Q Consensus 173 ~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~-------~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~ 245 (360)
+++++.. .+.+...++++.+++++.++++|+++... .....+.+.++++ ++|++++|++|+..|++..
T Consensus 122 ~v~~~~~-~~~~~~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~g~~-- 196 (298)
T 1vk4_A 122 AVHINPL-WYGEFPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLK--YLDLFKVDSREAETLTGTN-- 196 (298)
T ss_dssp EEEECCS-STTSSCGGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGG--GCSEEEEEHHHHHHHHSCS--
T ss_pred EEEECCc-ccccccHHHHHHHHHcCCEEEEecCccccccccccccccchHHHHhhcc--cCCEEecCHHHHHHHhCCC--
Confidence 9999822 12334457778888889999999963100 0011124567787 8999999999999999853
Q ss_pred CcHHHHH-HHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHc-CCCHHHHHHHHHH
Q 018120 246 ADSEAAL-EFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVK-GLSLEECCKVGSC 323 (360)
Q Consensus 246 ~~~~~~~-~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~-~~~l~~a~~~a~~ 323 (360)
+++++. .++..+++.|+||+ ++|++++++ +.+++|++ .++++|||||||+|+|||++++++ |+++++|+++|++
T Consensus 197 -~~~~~~~~l~~~g~~~vvvT~-~~G~~~~~~-~~~~~~~~-~v~vvDttGAGDaF~a~~~~~l~~~g~~~~~a~~~A~a 272 (298)
T 1vk4_A 197 -DLRESCRIIRSFGAKIILATH-ASGVIVFDG-NFYEASFR-SWSLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKFAAA 272 (298)
T ss_dssp -CHHHHHHHHHHTTCSSEEEEE-TTEEEEESS-SEEEEECC-CSSGGGGTTHHHHHHHHHHHHHHTSCCCHHHHHHHHHH
T ss_pred -CHHHHHHHHHhcCCCEEEEEc-CCCcEEEeC-CEEEeccC-CcccCCCcCccHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 555544 45556889999999 999999887 78889988 478999999999999999999999 9999999999999
Q ss_pred HhcchhcccCCccCcccHHHH
Q 018120 324 SGGSVIRSLGGEVTPENWQWM 344 (360)
Q Consensus 324 aaa~~v~~~G~~~~~~~~~~~ 344 (360)
+|+.+|++.|+... ++.+++
T Consensus 273 ~aa~~v~~~G~~~~-~~~~el 292 (298)
T 1vk4_A 273 VTSVKMRHPGPLRR-EDLEAI 292 (298)
T ss_dssp HHHHHTTSSSSCCG-GGGGGC
T ss_pred HHHHHHccCCCCCC-CCHHHH
Confidence 99999999998754 555554
No 51
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.90 E-value=4.1e-24 Score=195.53 Aligned_cols=212 Identities=16% Similarity=0.145 Sum_probs=150.4
Q ss_pred ceEEEEeecCChhHHHHHHHHHhCCCeeceeeec--CCCCeeEEEEEcCCCceeeecccccccCCCcccCCc--cc----
Q 018120 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMK--RGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--ED---- 167 (360)
Q Consensus 96 ~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~--~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~--~~---- 167 (360)
.+.++|.+|+|. |+.+ |++.||+++++... ..+|+..+ ..+ ..++++++.. +.
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~~t~~~~-------------~~g--~~l~~~~i~~~~~~~~~~ 72 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSNHTGYAH-------------WKG--QVLNSDELQELYEGLRLN 72 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESSCTTSSC-------------CCE--EECCHHHHHHHHHHHHHT
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecCCCCcCC-------------ccC--ccCCHHHHHHHHHHHHhc
Confidence 567889999998 9999 99999999987653 22232111 111 2344444431 11
Q ss_pred -cCCCcEEEEeecccC---HHHHHHHHHHHHHCCCe--EEEeCCChhH---------HHhhhHHHHH-hhccCCccEEEc
Q 018120 168 -VKGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLS--VSMDLASFEM---------VRNFRTPLLQ-LLESGDVDLCFA 231 (360)
Q Consensus 168 -~~~~~~v~~~~~~~~---~~~~~~~~~~a~~~~~~--v~~d~~~~~~---------~~~~~~~l~~-~l~~~~~dil~~ 231 (360)
+.+++++++++. .+ .+.+.++++.++++|.+ +++||..... ...+++.+.+ +++ ++|++++
T Consensus 73 ~~~~~~~v~~G~~-~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~--~~dil~p 149 (312)
T 2yxt_A 73 NMNKYDYVLTGYT-RDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVP--LADIITP 149 (312)
T ss_dssp TCCCCSEEEECCC-CCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGG--GCSEECC
T ss_pred CCccCCEEEECCC-CCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhh--hCCEEcC
Confidence 678899887632 24 35556888888888764 8899863211 1133455654 787 8999999
Q ss_pred CHHHHHHhhcCCCC--CcHHHH-HHHHHcCCCEEEEEeCCC------ceEEE-------EC-C----EEEEeCCcCCCcc
Q 018120 232 NEDEAAELVRGEEN--ADSEAA-LEFLAKRCQWAVVTLGPN------GCIAK-------HG-K----EIVKVPAIGEAKA 290 (360)
Q Consensus 232 n~~E~~~l~~~~~~--~~~~~~-~~~l~~~~~~vivt~G~~------G~~~~-------~~-~----~~~~~~~~~~~~v 290 (360)
|++|+..|++.... ++..++ .+++..+++.|+||.|+. |++++ ++ + +.+++|+++ +++
T Consensus 150 N~~Ea~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v 228 (312)
T 2yxt_A 150 NQFEAELLSGRKIHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRK-VDA 228 (312)
T ss_dssp CHHHHHHHHSCCCCSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEEC-CSS
T ss_pred CHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeecc-cCC
Confidence 99999999986421 233343 445566899999998876 47665 44 2 678888874 666
Q ss_pred cCCCCccHHhHHHHHHHHHc-CCCHHHHHHHHHHHhcchhcc
Q 018120 291 IDATGAGDLFASGFLYGLVK-GLSLEECCKVGSCSGGSVIRS 331 (360)
Q Consensus 291 vdttGAGD~f~ag~~~~l~~-~~~l~~a~~~a~~aaa~~v~~ 331 (360)
||+||||+|+|+|++++++ |+++++|+++|+++++.++++
T Consensus 229 -dttGAGDaf~a~~~~~l~~~g~~l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 229 -VFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp -CCSSHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCchHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 999999999999999988865
No 52
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.89 E-value=1e-22 Score=183.68 Aligned_cols=219 Identities=17% Similarity=0.214 Sum_probs=153.2
Q ss_pred cCCceEE-EEeecCChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeecccccccCCCcccCCc------
Q 018120 93 FGVPCGL-IGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA------ 165 (360)
Q Consensus 93 lG~~v~~-ig~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~------ 165 (360)
|+..... +|.+|.|. ....|++.||++.++.. . ++.+..|.+.+. + ..++.+++..
T Consensus 19 L~i~~~~~~g~~G~d~----~~~~l~~~Gv~~~~v~t-------~-i~~~~~g~~~~~---g--~~~~~~~~~~~~~~l~ 81 (283)
T 2ddm_A 19 VAVQSQVVYGSVGNSI----AVPAIKQNGLNVFAVPT-------V-LLSNTPHYDTFY---G--GAIPDEWFSGYLRALQ 81 (283)
T ss_dssp EEEEEEESSSSSTHHH----HHHHHHHTTCCEEEEEE-------E-EESSCTTSSCCC---E--EECCHHHHHHHHHHHH
T ss_pred EEEecccCCCcchHHH----HHHHHHHcCCeeeEEeE-------E-EeccCCCcCcee---e--eeCCHHHHHHHHHHHH
Confidence 6777555 88889873 35678889999988743 1 222444554421 1 2333333321
Q ss_pred c--ccCCCcEEEEeecc--cCHHHHHHHHHHHHH--CCCeEEEeCCChh------HHHhhhHHH-HHhhccCCccEEEcC
Q 018120 166 E--DVKGSKWLVLRFGM--FNFEVIQAAIRIAKQ--EGLSVSMDLASFE------MVRNFRTPL-LQLLESGDVDLCFAN 232 (360)
Q Consensus 166 ~--~~~~~~~v~~~~~~--~~~~~~~~~~~~a~~--~~~~v~~d~~~~~------~~~~~~~~l-~~~l~~~~~dil~~n 232 (360)
+ .+++++++++++.. ...+.+.++++.+++ .++++++||.... ......+.+ .++++ ++|++++|
T Consensus 82 ~~~~~~~~~~v~~G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~--~~dil~pN 159 (283)
T 2ddm_A 82 ERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLP--LAQGITPN 159 (283)
T ss_dssp HTTCCTTCCEEEECCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGG--GCSEECCB
T ss_pred hcCCcccCCEEEECCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhh--hceEecCC
Confidence 1 35678999987321 123667778888887 7899999986321 000112223 34677 89999999
Q ss_pred HHHHHHhhcCCCC--CcHHHHHH-HHHcCCCEEEEEeCCC-------ceEEEECCEEEEeCCcCCCcccCCCCccHHhHH
Q 018120 233 EDEAAELVRGEEN--ADSEAALE-FLAKRCQWAVVTLGPN-------GCIAKHGKEIVKVPAIGEAKAIDATGAGDLFAS 302 (360)
Q Consensus 233 ~~E~~~l~~~~~~--~~~~~~~~-~l~~~~~~vivt~G~~-------G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~a 302 (360)
+.|+..|+|.... ++..++.+ +++.+++.|+||.|++ |++++++++.+++++++ .. +||+||||+|.|
T Consensus 160 ~~E~~~L~g~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~-v~-vdt~GAGDaf~a 237 (283)
T 2ddm_A 160 IFELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSR-VK-TDLKGTGDLFCA 237 (283)
T ss_dssp HHHHHHHHTSCCSSHHHHHHHHHHHCCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEEC-CC-CCCCCHHHHHHH
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeece-eC-CCCCChHHHHHH
Confidence 9999999986422 23334434 4445789999999999 89998888888898884 54 899999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHhcchhccc
Q 018120 303 GFLYGLVKGLSLEECCKVGSCSGGSVIRSL 332 (360)
Q Consensus 303 g~~~~l~~~~~l~~a~~~a~~aaa~~v~~~ 332 (360)
+|++++++|+++++|+++|+++++.++++.
T Consensus 238 ~~~~~l~~g~~~~~A~~~A~a~a~~~v~~~ 267 (283)
T 2ddm_A 238 QLISGLLKGKALTDAVHRAGLRVLEVMRYT 267 (283)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999875
No 53
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.86 E-value=8.7e-22 Score=177.97 Aligned_cols=159 Identities=14% Similarity=0.099 Sum_probs=119.8
Q ss_pred CCcEEEEeecccCHHHHHHHHHHHHHCCCe-EEEeCCChhH------HHhhhHHHHH-hhccCCccEEEcCHHHHHHhhc
Q 018120 170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGLS-VSMDLASFEM------VRNFRTPLLQ-LLESGDVDLCFANEDEAAELVR 241 (360)
Q Consensus 170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~~~~-v~~d~~~~~~------~~~~~~~l~~-~l~~~~~dil~~n~~E~~~l~~ 241 (360)
.+|++++++ ..+.+.+..+++.+++.+.+ +++||..... .....+.+.+ +++ ++|++++|+.|+..|++
T Consensus 94 ~~~~v~~G~-l~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~--~~dil~pN~~Ea~~L~g 170 (288)
T 1jxh_A 94 RIDTTKIGM-LAETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLP--QVSLITPNLPEAAALLD 170 (288)
T ss_dssp CCSEEEECC-CCSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGG--GCSEEECBHHHHHHHHT
T ss_pred CCCEEEECC-CCCHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHh--hCcEEcCCHHHHHHHcC
Confidence 368888773 33678899999999999986 9999864311 0111233443 677 89999999999999998
Q ss_pred C-CCC--CcHHH-HHHHHHcCCCEEEEEeCCCc-----eEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCC
Q 018120 242 G-EEN--ADSEA-ALEFLAKRCQWAVVTLGPNG-----CIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGL 312 (360)
Q Consensus 242 ~-~~~--~~~~~-~~~~l~~~~~~vivt~G~~G-----~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~ 312 (360)
. ... ++..+ +.++++.+.+.|+||.|++| ++++++++.++++++ ..+++||+||||+|+|+|++++++|+
T Consensus 171 ~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~-~~~~vdttGAGD~f~a~~~a~l~~g~ 249 (288)
T 1jxh_A 171 APHARTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAP-RVNTKNTHGTGCTLSAALAALRPRHR 249 (288)
T ss_dssp CCCCCSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECSSCEEEC----CCCCSCCBTHHHHHHHHHHHHGGGSS
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCEEEEeccCCCCCceeEEEEECCeEEEEecc-ccCCCCCCCchHHHHHHHHHHHHcCC
Confidence 6 321 22333 34455668899999999999 888888888889887 47899999999999999999999999
Q ss_pred CHHHHHHHHHHHhcchhccc
Q 018120 313 SLEECCKVGSCSGGSVIRSL 332 (360)
Q Consensus 313 ~l~~a~~~a~~aaa~~v~~~ 332 (360)
++++|+++|+++++.++++.
T Consensus 250 ~~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 250 SWGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp SHHHHHHHHHHHHHHHHTTG
T ss_pred CHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999775
No 54
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.83 E-value=1.6e-19 Score=160.50 Aligned_cols=159 Identities=16% Similarity=0.138 Sum_probs=122.8
Q ss_pred CCcEEEEeecccCHHHHHHHHHHHHHCC-CeEEEeCCChhH------HHhhhHHH-HHhhccCCccEEEcCHHHHHHhhc
Q 018120 170 GSKWLVLRFGMFNFEVIQAAIRIAKQEG-LSVSMDLASFEM------VRNFRTPL-LQLLESGDVDLCFANEDEAAELVR 241 (360)
Q Consensus 170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~~-~~v~~d~~~~~~------~~~~~~~l-~~~l~~~~~dil~~n~~E~~~l~~ 241 (360)
+.+.+++.+ ..+.+.+..+++.+++.+ .++++||..... .....+.+ .++++ ++|++++|+.|+..|++
T Consensus 70 ~~~~v~~G~-l~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~--~~dil~pN~~E~~~L~g 146 (258)
T 1ub0_A 70 PLHAAKTGA-LGDAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFP--LADLVTPNRLEAEALLG 146 (258)
T ss_dssp CCSEEEECC-CCSHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGG--GCSEECCBHHHHHHHHC
T ss_pred CCCEEEECC-cCCHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcc--cCeEEeCCHHHHHHHhC
Confidence 467777763 335678888999999988 899999964211 01112334 34677 89999999999999998
Q ss_pred CCCC--CcHHHH-HHHHHcCCCEEEEEeCCC-c----eEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCC
Q 018120 242 GEEN--ADSEAA-LEFLAKRCQWAVVTLGPN-G----CIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLS 313 (360)
Q Consensus 242 ~~~~--~~~~~~-~~~l~~~~~~vivt~G~~-G----~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~ 313 (360)
.... ++..++ .++.+.+++.|++|.|++ | ++++++++.++++++ ..+++||+||||+|.|+|++++++|++
T Consensus 147 ~~~~~~~~~~~~a~~l~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~-~~~~~dt~GaGD~f~a~~~~~l~~g~~ 225 (258)
T 1ub0_A 147 RPIRTLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAP-RVHTRNTHGTGCTLSAAIAALLAKGRP 225 (258)
T ss_dssp SCCCSHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEEETTEEEEEEEC-CCCCSCCTTHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEecc-ccCCCCCCChHHHHHHHHHHHHHcCCC
Confidence 6422 233334 344455788999999998 8 788888888889887 478999999999999999999999999
Q ss_pred HHHHHHHHHHHhcchhccc
Q 018120 314 LEECCKVGSCSGGSVIRSL 332 (360)
Q Consensus 314 l~~a~~~a~~aaa~~v~~~ 332 (360)
+++|+++|+++++.++++.
T Consensus 226 ~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 226 LAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999888763
No 55
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.80 E-value=8.6e-19 Score=156.91 Aligned_cols=159 Identities=19% Similarity=0.152 Sum_probs=125.1
Q ss_pred CCcEEEEeecccCHHHHHHHHHHHHHCCC-eEEEeCCChhH------HHhhhHHHH-HhhccCCccEEEcCHHHHHHhhc
Q 018120 170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGL-SVSMDLASFEM------VRNFRTPLL-QLLESGDVDLCFANEDEAAELVR 241 (360)
Q Consensus 170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~~~-~v~~d~~~~~~------~~~~~~~l~-~~l~~~~~dil~~n~~E~~~l~~ 241 (360)
++|.+++++ ..+.+.+..+++.+++.+. ++++||..... .+...+.+. ++++ ++|++++|+.|+..|++
T Consensus 74 ~~d~v~~G~-l~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~--~~diltpN~~E~~~L~g 150 (271)
T 2i5b_A 74 GVDAMKTGM-LPTVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAP--LATVITPNLFEASQLSG 150 (271)
T ss_dssp CCSEEEECC-CCSHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGG--GCSEECCBHHHHHHHHT
T ss_pred CCCEEEECC-CCCHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHh--hCcEEcCCHHHHHHHhC
Confidence 678888874 3357888899999999998 59999853211 112234554 6777 89999999999999998
Q ss_pred CC-CCC--cHHHH-HHHHHcCCCEEEEEeCC--Cce----EEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcC
Q 018120 242 GE-ENA--DSEAA-LEFLAKRCQWAVVTLGP--NGC----IAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKG 311 (360)
Q Consensus 242 ~~-~~~--~~~~~-~~~l~~~~~~vivt~G~--~G~----~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~ 311 (360)
.. ..+ +..++ .++.+.+.+.|++|.|. +|+ +++++++.++++++ ..+++||+||||+|.|+|++++++|
T Consensus 151 ~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~dt~GaGD~f~a~~~~~l~~g 229 (271)
T 2i5b_A 151 MDELKTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESE-MIDTPYTHGAGCTFSAAVTAELAKG 229 (271)
T ss_dssp CCCCCSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEEC-CCCCSCCBTHHHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEecc-ccCCCCCCChHHHHHHHHHHHHHcC
Confidence 64 221 33333 44455578999999999 784 67777778888888 4788999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcchhccc
Q 018120 312 LSLEECCKVGSCSGGSVIRSL 332 (360)
Q Consensus 312 ~~l~~a~~~a~~aaa~~v~~~ 332 (360)
+++++|+++|+++++.++++.
T Consensus 230 ~~~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 230 AEVKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp CCHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999774
No 56
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.75 E-value=1.9e-17 Score=148.65 Aligned_cols=157 Identities=18% Similarity=0.108 Sum_probs=122.2
Q ss_pred CCcEEEEeecccCHHHHHHHHHHHHHC-CCeEEEeCCCh-----h--HHHhhhHHHHHhhccCCccEEEcCHHHHHHhhc
Q 018120 170 GSKWLVLRFGMFNFEVIQAAIRIAKQE-GLSVSMDLASF-----E--MVRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241 (360)
Q Consensus 170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~-~~~v~~d~~~~-----~--~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~ 241 (360)
+.|.+.+++. .+.+.+..+.+..++. +.+++|||.-. + ..+...+.+.++++ .+|+++||..|++.|+|
T Consensus 74 ~~daik~G~l-~s~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~--~adiitpN~~Ea~~L~g 150 (282)
T 3h74_A 74 HFDQALIGYV-GSVALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQ--QADVILPNTTEAALLTG 150 (282)
T ss_dssp CCSEEEECCC-CSHHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGG--GCSEECCCHHHHHHHHT
T ss_pred ccCEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhc--cCCEECCCHHHHHHHhC
Confidence 5788888732 2567777777777664 68899999522 1 12344456678888 89999999999999998
Q ss_pred CCC--CCcHHHHHH-HHH-cCC-CEEEEEeCC----CceEEEE-CCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcC
Q 018120 242 GEE--NADSEAALE-FLA-KRC-QWAVVTLGP----NGCIAKH-GKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKG 311 (360)
Q Consensus 242 ~~~--~~~~~~~~~-~l~-~~~-~~vivt~G~----~G~~~~~-~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~ 311 (360)
... .++.+++.+ +.+ .++ +.|+||.|. .|+++++ +++.+++++++ . .+|++||||+|.|+|++++++|
T Consensus 151 ~~~~~~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~-v-~~dt~GaGD~fsaai~a~l~~g 228 (282)
T 3h74_A 151 APYQVTPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARR-L-PGHYNGTGDTLAAVIAGLLGRG 228 (282)
T ss_dssp CCCCSSCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEEC-C-SSCCTTHHHHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecC-C-CCCCcCHHHHHHHHHHHHHHCC
Confidence 642 245555554 445 478 899999994 7888885 67777888774 4 3899999999999999999999
Q ss_pred CCHHHHHHHHHHHhcchhcc
Q 018120 312 LSLEECCKVGSCSGGSVIRS 331 (360)
Q Consensus 312 ~~l~~a~~~a~~aaa~~v~~ 331 (360)
+++++|+++|+++++.++++
T Consensus 229 ~~l~~A~~~A~~~~~~ai~~ 248 (282)
T 3h74_A 229 YPLAPTLARANQWLNMAVAE 248 (282)
T ss_dssp CCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998876
No 57
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.74 E-value=1.5e-17 Score=150.07 Aligned_cols=158 Identities=16% Similarity=0.039 Sum_probs=118.1
Q ss_pred CCcEEEEeecc--cCHHHHHHHHHHHHHCCCeEEEeCCChhH-------HHhhhHHHHHhhccCCccEEEcCHHHHHHhh
Q 018120 170 GSKWLVLRFGM--FNFEVIQAAIRIAKQEGLSVSMDLASFEM-------VRNFRTPLLQLLESGDVDLCFANEDEAAELV 240 (360)
Q Consensus 170 ~~~~v~~~~~~--~~~~~~~~~~~~a~~~~~~v~~d~~~~~~-------~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~ 240 (360)
..|.+.+++.. -..+.+.++++.+++.+.++++||..... .+...+.+.++++ .+|+++||..|++.|+
T Consensus 77 ~~~aik~G~l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~--~adiitpN~~Ea~~L~ 154 (291)
T 3mbh_A 77 QFDAIYTGYLGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLIT--KADVITPNLTELFYLL 154 (291)
T ss_dssp CCSEEEECCCSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGG--GCSEECCBHHHHHHHH
T ss_pred ccCEEEECCCCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhc--cCCEEeCCHHHHHHHh
Confidence 56888887321 11355666666665567899999964311 1333455678888 8999999999999999
Q ss_pred cCCCC-----CcHHHH-HHHHHcCCCEEEEEeC-------CCceEEEEC--CEEEEeCCcCCCcccCCCCccHHhHHHHH
Q 018120 241 RGEEN-----ADSEAA-LEFLAKRCQWAVVTLG-------PNGCIAKHG--KEIVKVPAIGEAKAIDATGAGDLFASGFL 305 (360)
Q Consensus 241 ~~~~~-----~~~~~~-~~~l~~~~~~vivt~G-------~~G~~~~~~--~~~~~~~~~~~~~vvdttGAGD~f~ag~~ 305 (360)
|.... ++.+++ .++.+.+++.|+||.| ..|++++++ ++.+++++++ .. +|++||||+|.|+|+
T Consensus 155 g~~~~~~~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~-~~-~dt~GaGD~f~aai~ 232 (291)
T 3mbh_A 155 DEPYKADSTDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPY-LP-AHYPGTGDTFTSVIT 232 (291)
T ss_dssp TCCCCSCCCHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESC-CG-GGSTTHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEecc-cC-CCCCChHHHHHHHHH
Confidence 86521 233444 4455668999999965 357788876 4566777763 54 899999999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHhcchhcc
Q 018120 306 YGLVKGLSLEECCKVGSCSGGSVIRS 331 (360)
Q Consensus 306 ~~l~~~~~l~~a~~~a~~aaa~~v~~ 331 (360)
+++++|+++++|+++|+++++.++++
T Consensus 233 a~l~~g~~l~~A~~~A~~~~~~ai~~ 258 (291)
T 3mbh_A 233 GSLMQGDSLPMALDRATQFILQGIRA 258 (291)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888876
No 58
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.74 E-value=7.2e-18 Score=152.18 Aligned_cols=161 Identities=16% Similarity=0.047 Sum_probs=119.1
Q ss_pred CCCcEEEEeecc--cCHHHHHHHHHHHHHCC--CeEEEeCCCh------hHHHhhhHHHHH-hhccCCccEEEcCHHHHH
Q 018120 169 KGSKWLVLRFGM--FNFEVIQAAIRIAKQEG--LSVSMDLASF------EMVRNFRTPLLQ-LLESGDVDLCFANEDEAA 237 (360)
Q Consensus 169 ~~~~~v~~~~~~--~~~~~~~~~~~~a~~~~--~~v~~d~~~~------~~~~~~~~~l~~-~l~~~~~dil~~n~~E~~ 237 (360)
.++|++++++.. ...+.+.++++.+++.+ .++++||.-. ...+...+.+.+ +++ ++|+++||..|++
T Consensus 76 ~~~d~v~~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~--~~diitpN~~E~~ 153 (289)
T 3pzs_A 76 KDCDAVLSGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALP--ASDMIAPNLLELE 153 (289)
T ss_dssp GGCCEEEECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHH--HCSEECCCHHHHH
T ss_pred cCCCEEEECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhc--cCCEEeCCHHHHH
Confidence 578887766321 12467777888887766 7899997311 111223344553 566 8999999999999
Q ss_pred HhhcCCCC--CcHHHH-HHHHHcCCCEEEEEeC-CCce-------EEEECCEEEEeCCcCCCcc--cCCCCccHHhHHHH
Q 018120 238 ELVRGEEN--ADSEAA-LEFLAKRCQWAVVTLG-PNGC-------IAKHGKEIVKVPAIGEAKA--IDATGAGDLFASGF 304 (360)
Q Consensus 238 ~l~~~~~~--~~~~~~-~~~l~~~~~~vivt~G-~~G~-------~~~~~~~~~~~~~~~~~~v--vdttGAGD~f~ag~ 304 (360)
.|+|.... ++..++ .++...+.+.|+||.| .+|+ +++++++.++++++ ..++ +|++||||+|.|+|
T Consensus 154 ~L~g~~~~~~~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~dt~GaGD~f~a~~ 232 (289)
T 3pzs_A 154 QLSGERVENVEQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRP-LVDFGKRQPVGVGDLTSGLL 232 (289)
T ss_dssp HHHTSCCCSHHHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEE-CCCCTTSCCTTHHHHHHHHH
T ss_pred HHhCCCCCCHHHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEee-eecCCCCCCCcHHHHHHHHH
Confidence 99986522 223333 4455568899999985 5786 77777778888766 3555 89999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHhcchhccc
Q 018120 305 LYGLVKGLSLEECCKVGSCSGGSVIRSL 332 (360)
Q Consensus 305 ~~~l~~~~~l~~a~~~a~~aaa~~v~~~ 332 (360)
++++.+|+++++|+++|+++++.++++.
T Consensus 233 ~~~l~~g~~~~~A~~~A~~~~~~~i~~t 260 (289)
T 3pzs_A 233 LVNLLKGEPLDKALEHVTAAVYEVMLKT 260 (289)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988888763
No 59
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.70 E-value=1.8e-16 Score=143.52 Aligned_cols=157 Identities=13% Similarity=0.054 Sum_probs=113.0
Q ss_pred CCCcEEEEeecccCH---HHHHHHHHHHHHCC------CeEEEeCCC-----hhHHHhhhHHHHHhhccCCccEEEcCHH
Q 018120 169 KGSKWLVLRFGMFNF---EVIQAAIRIAKQEG------LSVSMDLAS-----FEMVRNFRTPLLQLLESGDVDLCFANED 234 (360)
Q Consensus 169 ~~~~~v~~~~~~~~~---~~~~~~~~~a~~~~------~~v~~d~~~-----~~~~~~~~~~l~~~l~~~~~dil~~n~~ 234 (360)
.++|+|.+++.. +. +.+.++++..++.+ .++++||.- .+..+...+.+.++++ .+|+++||..
T Consensus 75 ~~~daV~tG~l~-s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~--~adiitPN~~ 151 (300)
T 3zs7_A 75 SNYRYILTGYIN-NVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRELVP--LADIVTPNYF 151 (300)
T ss_dssp GGCSEEEECCCC-CHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHHHGG--GCSEECCCHH
T ss_pred ccCCEEEECCCC-CHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHHHhh--hCCEecCCHH
Confidence 567888887322 33 55566666666554 789999942 2233344566777888 8999999999
Q ss_pred HHHHhhcCCCC--CcHHHH-HHHHHcCCCEEEEEeCCCc-------eEEEEC------CEEEEeCCcCCCcccCCCCccH
Q 018120 235 EAAELVRGEEN--ADSEAA-LEFLAKRCQWAVVTLGPNG-------CIAKHG------KEIVKVPAIGEAKAIDATGAGD 298 (360)
Q Consensus 235 E~~~l~~~~~~--~~~~~~-~~~l~~~~~~vivt~G~~G-------~~~~~~------~~~~~~~~~~~~~vvdttGAGD 298 (360)
|++.|+|..-. ++..++ .+++..+++.|+||.|..| +++..+ ++.++++.+ ..+. |++|+||
T Consensus 152 Ea~~L~g~~~~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~v~~-~~~GtGD 229 (300)
T 3zs7_A 152 EASLLSGVTVNDLSSAILAADWFHNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVP-YHEG-RYTGTGD 229 (300)
T ss_dssp HHHHHHSSCCCSHHHHHHHHHHHHHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEE-CCSS-CBTTHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEec-cCCC-CCcCHHH
Confidence 99999986522 223333 4455668999999999988 233334 467777776 3555 8999999
Q ss_pred HhHHHHHHHHHcCCCHHHHHHHHHHHhcchhcc
Q 018120 299 LFASGFLYGLVKGLSLEECCKVGSCSGGSVIRS 331 (360)
Q Consensus 299 ~f~ag~~~~l~~~~~l~~a~~~a~~aaa~~v~~ 331 (360)
+|.|+|++++ +|+++++|+++|.++...++++
T Consensus 230 ~fsaal~a~l-~g~~~~~Av~~A~~~v~~~i~~ 261 (300)
T 3zs7_A 230 VFAACLLAFS-HSHPMDVAIGKSMAVLQELIIA 261 (300)
T ss_dssp HHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999 9999999999999998887765
No 60
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.63 E-value=3.1e-15 Score=133.48 Aligned_cols=162 Identities=15% Similarity=0.038 Sum_probs=109.5
Q ss_pred cccCCCcEEEEeecccC---HHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcC
Q 018120 166 EDVKGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRG 242 (360)
Q Consensus 166 ~~~~~~~~v~~~~~~~~---~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~ 242 (360)
+.+..++++++..+..+ .+.+.++++.+++.++++++||..........+...++++..++|+++||..|+..|+|.
T Consensus 54 ~~~~~a~~lvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~~~~~~~~~ll~~~~~~vitPN~~E~~~L~g~ 133 (272)
T 1ekq_A 54 DMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVGV 133 (272)
T ss_dssp HHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECHHHHHHHCC-
T ss_pred HHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcccchHHHHHHHHccCCCeEECCCHHHHHHHhCC
Confidence 34567899999844444 356677788888999999999975421111112223444312689999999999999985
Q ss_pred C-C----------CCcHHHH-HHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHc
Q 018120 243 E-E----------NADSEAA-LEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVK 310 (360)
Q Consensus 243 ~-~----------~~~~~~~-~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~ 310 (360)
. . .++..++ .++.+.....|++| |+.+ +++++++.+++++. ...+.|++|+||+|.|.+.+.+.+
T Consensus 134 ~~~~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~-G~~~-~i~~~~~~~~~~~~-~~~~~~ttGaGD~lag~iaa~la~ 210 (272)
T 1ekq_A 134 TDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAIT-GEVD-VIADTSHVYTLHNG-HKLLTKVTGAGCLLTSVVGAFCAV 210 (272)
T ss_dssp --------------HHHHHHHHHHHHHHTSEEEEC-SSSE-EEECSSCEEEECCC-CGGGGGSTTHHHHHHHHHHHHHTT
T ss_pred CcccccCccCCCCHHHHHHHHHHHHHHcCCEEEEE-CCCC-EEEeCCEEEEEcCC-CccccCccCchHHHHHHHHHHHhc
Confidence 4 1 1122333 33444444455555 9887 55566678888876 466779999999998888888888
Q ss_pred CCCHHHHHHHHHH----Hhcchhc
Q 018120 311 GLSLEECCKVGSC----SGGSVIR 330 (360)
Q Consensus 311 ~~~l~~a~~~a~~----aaa~~v~ 330 (360)
|.++.+|+++|+. ++....+
T Consensus 211 g~~~~~A~~~A~~~~~~A~~~a~~ 234 (272)
T 1ekq_A 211 EENPLFAAIAAISSYGVAAQLAAQ 234 (272)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999986 4444443
No 61
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.48 E-value=3.3e-13 Score=131.82 Aligned_cols=155 Identities=12% Similarity=0.044 Sum_probs=108.7
Q ss_pred CCcEEEEeecccCHHHHHHHHH---HHHHCCCeEEEeCCChh------HHHhhhHHHH-HhhccCCccEEEcCHHHHHHh
Q 018120 170 GSKWLVLRFGMFNFEVIQAAIR---IAKQEGLSVSMDLASFE------MVRNFRTPLL-QLLESGDVDLCFANEDEAAEL 239 (360)
Q Consensus 170 ~~~~v~~~~~~~~~~~~~~~~~---~a~~~~~~v~~d~~~~~------~~~~~~~~l~-~~l~~~~~dil~~n~~E~~~l 239 (360)
+.|.|.+++. +.+.+..+.+ ..++.+.++++||.-.. ..+...+.+. ++++ .+|+++||..|+..|
T Consensus 91 ~~daIkiG~l--s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~--~a~iitPN~~Ea~~L 166 (550)
T 3rm5_A 91 KCNVIKTGML--TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVAP--FADILTPNIPECYKL 166 (550)
T ss_dssp CCSEEEECSC--CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTGG--GCSEECCBHHHHHHH
T ss_pred CCCEEEECCC--CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhhC--cceEEecCHHHHHHH
Confidence 6788998744 6655554444 44445889999995321 1112233454 6777 899999999999999
Q ss_pred hcCC----CCCcHHHHH-HHHHcCC-CEEEEEeCCCc--------e--EEE--ECCEEEEeCCcCCCcccCCCCccHHhH
Q 018120 240 VRGE----ENADSEAAL-EFLAKRC-QWAVVTLGPNG--------C--IAK--HGKEIVKVPAIGEAKAIDATGAGDLFA 301 (360)
Q Consensus 240 ~~~~----~~~~~~~~~-~~l~~~~-~~vivt~G~~G--------~--~~~--~~~~~~~~~~~~~~~vvdttGAGD~f~ 301 (360)
+|.. +.++..++. ++.+.+. +.|+||.|..+ + +++ .+++.++++.+ ..+.+||+|+||+|.
T Consensus 167 ~g~~~~i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~-~v~~~~t~GtGD~fs 245 (550)
T 3rm5_A 167 LGEERKVNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGN-FVNTTHTHGTGCTLA 245 (550)
T ss_dssp HSCCCCCCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEE-CCCCSCCBTHHHHHH
T ss_pred hCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEec-CcCCCCCcChhHHHH
Confidence 9863 112334444 4455565 79999998763 3 455 35677778776 467789999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHhcchh
Q 018120 302 SGFLYGLVKGLSLEECCKVGSCSGGSVI 329 (360)
Q Consensus 302 ag~~~~l~~~~~l~~a~~~a~~aaa~~v 329 (360)
|++++.+++|+++.+|+++|+..-...+
T Consensus 246 aaiaa~La~G~~l~eAv~~A~~~v~~ai 273 (550)
T 3rm5_A 246 SAIASNLARGYSLPQSVYGGIEYVQNAV 273 (550)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999996443333
No 62
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.35 E-value=5.2e-12 Score=111.90 Aligned_cols=158 Identities=16% Similarity=0.117 Sum_probs=108.4
Q ss_pred cccCCCcEEEEeecccCHH---HHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcC
Q 018120 166 EDVKGSKWLVLRFGMFNFE---VIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRG 242 (360)
Q Consensus 166 ~~~~~~~~v~~~~~~~~~~---~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~ 242 (360)
+.++.+|++++..+....+ .+..+++.+++.+.++++||..........+.+.++++. .++++.||..|+..|+|.
T Consensus 52 ~~~~~~dalvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~-~~~vITPN~~E~~~L~g~ 130 (265)
T 1v8a_A 52 EMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSR-GVDVLKGNFGEISALLGE 130 (265)
T ss_dssp HHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHH-CCSEEEEEHHHHHHHHHH
T ss_pred HHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHHHHHHHh-CCcEEcCCHHHHHHHhCC
Confidence 4567899999995555554 556677788889999999997532211111233444442 389999999999999874
Q ss_pred CC----------C-CcHHH-HHHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHc
Q 018120 243 EE----------N-ADSEA-ALEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVK 310 (360)
Q Consensus 243 ~~----------~-~~~~~-~~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~ 310 (360)
.. . ++..+ +.++.+++...|++| |..+. ++++++.++++.. .....+++|+||+|.|.+.+.+.+
T Consensus 131 ~~~~~gvd~~~~~~~~~~~aa~~la~~~~~~Vvlk-G~~d~-i~~~~~~~~~~~g-~~~~~~~~GtGD~Lsg~iaa~lA~ 207 (265)
T 1v8a_A 131 EGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GAVDY-VSDGRRTFAVYNG-HELLGRVTGTGCMVAALTGAFVAV 207 (265)
T ss_dssp HC----------CHHHHHHHHHHHHHHTTSEEEEE-SSSEE-EECSSCEEEECCC-CGGGGGSTTHHHHHHHHHHHHHTT
T ss_pred cccccCcCcccccHHHHHHHHHHHHHHhCcEEEEc-CCCcE-EEcCCEEEEEcCC-CcCcCCccChhHHHHHHHHHHHhc
Confidence 31 0 12233 344445555566666 87774 4466677788775 244559999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcch
Q 018120 311 GLSLEECCKVGSCSGGSV 328 (360)
Q Consensus 311 ~~~l~~a~~~a~~aaa~~ 328 (360)
|.+ .+|+..|...-+.+
T Consensus 208 g~~-~~Aa~~a~~~~~~A 224 (265)
T 1v8a_A 208 TEP-LKATTSALVTFGIA 224 (265)
T ss_dssp SCH-HHHHHHHHHHHHHH
T ss_pred CCC-HHHHHHHHHHHHHH
Confidence 999 88888776554333
No 63
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=99.14 E-value=1.9e-09 Score=95.14 Aligned_cols=156 Identities=14% Similarity=0.022 Sum_probs=105.7
Q ss_pred cccCCCcEEEEeecccCH---HHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcC
Q 018120 166 EDVKGSKWLVLRFGMFNF---EVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRG 242 (360)
Q Consensus 166 ~~~~~~~~v~~~~~~~~~---~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~ 242 (360)
+..+.++.+++..+.+.. +.+..+++.+++.+.++++||..........+...+++. ..+++|.||..|+..|+|.
T Consensus 54 e~~~~a~alvIn~G~l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~~~Ll~-~~~~VItpN~~E~~~L~g~ 132 (273)
T 3dzv_A 54 QMFQQTSALVLNLGHLSQEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVGEKLVH-NQPTVVKGNLSEMRTFCQL 132 (273)
T ss_dssp HHHTTCSEEEEECCSCCHHHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHHHHHHH-TCCSEEEEEHHHHHHHTTC
T ss_pred HHHHHCCeEEEecCCCChHHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHHHHHHh-cCCcEECCCHHHHHHHhCC
Confidence 456889999999666665 455666677888999999999754322111233334442 2789999999999999986
Q ss_pred CCC----C------------cHHH-HHHHHHcCC-CEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHH
Q 018120 243 EEN----A------------DSEA-ALEFLAKRC-QWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGF 304 (360)
Q Consensus 243 ~~~----~------------~~~~-~~~~l~~~~-~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~ 304 (360)
... + +..+ +.++.+++. ..|++|-+ .- +++++++.+.++.. ....-.++|.||++.|.+
T Consensus 133 ~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~-~D-~i~dg~~~~~~~~G-~~~~~~v~GtGc~Ls~~I 209 (273)
T 3dzv_A 133 VSHGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGI-QD-VLVSQEQVIVLQNG-VPELDCFTGTGDLVGALV 209 (273)
T ss_dssp CCC-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESS-SE-EEECSSCEEEECCC-CGGGGSSTTHHHHHHHHH
T ss_pred cccccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECC-ee-EEEcCCEEEEeCCC-CcccCCcCCchHHHHHHH
Confidence 421 1 1122 334444455 55666543 32 44566667777665 233456799999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHh
Q 018120 305 LYGLVKGLSLEECCKVGSCSG 325 (360)
Q Consensus 305 ~~~l~~~~~l~~a~~~a~~aa 325 (360)
.+.+.+|.++.+|+..|...=
T Consensus 210 aa~lA~g~~~~~Aa~~A~~~~ 230 (273)
T 3dzv_A 210 AALLGEGNAPMTAAVAAVSYF 230 (273)
T ss_dssp HHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHH
Confidence 999999999999998886653
No 64
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=99.04 E-value=4e-09 Score=101.22 Aligned_cols=155 Identities=19% Similarity=0.188 Sum_probs=103.8
Q ss_pred cccCCCcEEEEeecccCHHHHHHHHH-HHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCC
Q 018120 166 EDVKGSKWLVLRFGMFNFEVIQAAIR-IAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEE 244 (360)
Q Consensus 166 ~~~~~~~~v~~~~~~~~~~~~~~~~~-~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~ 244 (360)
+.++.+|+++++.++...+...++++ .+++.+.++++|+....... ..+.+..+ ..+|+.||..|+..|+|...
T Consensus 316 ~~~~~~davviGpGlg~~~~~~~~~~~~l~~~~~pvVlDadgl~~l~---~~ll~~~~--~~~vlTPN~~E~~~L~g~~~ 390 (502)
T 3rss_A 316 ELSKDVDVVAIGPGLGNNEHVREFVNEFLKTLEKPAVIDADAINVLD---TSVLKERK--SPAVLTPHPGEMARLVKKTV 390 (502)
T ss_dssp HHHTTCSEEEECTTCCCSHHHHHHHHHHHHHCCSCEEECHHHHHTCC---HHHHHHCS--SCEEECCCHHHHHHHHTCCH
T ss_pred HHhccCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCEEEeCcccchhc---HHHHhccC--CCEEEeCCHHHHHHHhCCCc
Confidence 34678999999955444444444444 55667999999996532211 22333333 67999999999999998641
Q ss_pred ---CCcHHHHHHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHH
Q 018120 245 ---NADSEAALEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVG 321 (360)
Q Consensus 245 ---~~~~~~~~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a 321 (360)
.++.+.+.++.+++ ..+|+..|.. .++++++..+..+ . .....+++|+||+|.|.+.+.+.+|+++.+|+.+|
T Consensus 391 ~~~~~d~~aa~~la~~~-~~~VvlKG~~-~vi~~~~~~~~~~-~-g~~~~at~GsGD~Lag~iaa~lA~g~~~~~Aa~~A 466 (502)
T 3rss_A 391 GDVKYNYELAEEFAKEN-DCVLVLKSAT-TIVTDGEKTLFNI-T-GNTGLSKGGSGDVLTGMIAGFIAQGLSPLEASTVS 466 (502)
T ss_dssp HHHTTCHHHHHHHHHHH-TSEEEECSSS-EEEECSSCEEEEC-C-CCGGGSSTTHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHc-CCEEEEeCCC-eEEEcCCEEEEEC-C-CCCccccCCchHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 12344455555554 3466667754 4555666554444 3 35667899999998887777788999999999999
Q ss_pred HHHhcchh
Q 018120 322 SCSGGSVI 329 (360)
Q Consensus 322 ~~aaa~~v 329 (360)
+..-+.+-
T Consensus 467 ~~~hg~Ag 474 (502)
T 3rss_A 467 VYLHGFAA 474 (502)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77765543
No 65
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=99.02 E-value=2.1e-09 Score=97.04 Aligned_cols=150 Identities=12% Similarity=0.024 Sum_probs=92.4
Q ss_pred cCCCcEEEEeeccc-CHHHHHHHHHHHHH--CCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCC
Q 018120 168 VKGSKWLVLRFGMF-NFEVIQAAIRIAKQ--EGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEE 244 (360)
Q Consensus 168 ~~~~~~v~~~~~~~-~~~~~~~~~~~a~~--~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~ 244 (360)
++.+|.+.++.++. +.+....+.+..+. .+.++++|++......... +++....++||+||..|+..|+|...
T Consensus 109 ~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~g~~ll~~~~----~~l~~~~~~viTPN~~E~~~L~g~~~ 184 (310)
T 2r3b_A 109 VEQADVILIGPGLGLDATAQQILKMVLAQHQKQQWLIIDGSAITLFSQGN----FSLTYPEKVVFTPHQMEWQRLSHLPI 184 (310)
T ss_dssp HHHCSEEEECTTCCSSHHHHHHHHHHHHHCCTTCEEEEETHHHHHHHHTT----CCCSSGGGEEEECCHHHHHHHHCCCG
T ss_pred hccCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCCcEEEcCCcchhcccch----hhhcCCCCEEEcCCHHHHHHHhCCCC
Confidence 45678999984343 34333333333333 4889999996543221110 11211167999999999999998652
Q ss_pred C--C-cH-HHHHHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHH-HcCCCHHHHHH
Q 018120 245 N--A-DS-EAALEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGL-VKGLSLEECCK 319 (360)
Q Consensus 245 ~--~-~~-~~~~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l-~~~~~l~~a~~ 319 (360)
. + +. .++.+.+ + .+|+..| .+.++++++.. ++.+. .....++.|+||+| +|+++++ .+|+++.+|+.
T Consensus 185 ~~~~~~~a~~aA~~l--g--~~VvlKG-~~~vi~~~~~~-~~~~~-g~~~~~t~GtGD~L-ag~Iaa~lA~g~~~~eA~~ 256 (310)
T 2r3b_A 185 EQQTLANNQRQQAKL--G--STIVLKS-HRTTIFHAGEP-FQNTG-GNPGMATGGTGDTL-AGIIAGFLAQFKPTIETIA 256 (310)
T ss_dssp GGCCHHHHHHHHHHH--T--SEEEECS-TTCEEECSSSC-EECCC-CCGGGCSTTHHHHH-HHHHHHHHHHSCSSHHHHH
T ss_pred CcccchHHHHHHHHh--C--cEEEEeC-CceEEEECCEE-EEECC-CCCCCCCCChHHHH-HHHHHHHHHcCCCHHHHHH
Confidence 1 1 22 3333333 3 3566666 45666664434 44444 46678899999997 5555555 69999999999
Q ss_pred HHHHHhcchh
Q 018120 320 VGSCSGGSVI 329 (360)
Q Consensus 320 ~a~~aaa~~v 329 (360)
+|+++.+..-
T Consensus 257 ~A~~~~~~ag 266 (310)
T 2r3b_A 257 GAVYLHSLIG 266 (310)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9987766644
No 66
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=99.01 E-value=2e-09 Score=95.48 Aligned_cols=155 Identities=12% Similarity=0.024 Sum_probs=101.6
Q ss_pred ccCCCcEEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhc-cCCccEEEcCHHHHHHhhcCCC-
Q 018120 167 DVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLE-SGDVDLCFANEDEAAELVRGEE- 244 (360)
Q Consensus 167 ~~~~~~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~-~~~~dil~~n~~E~~~l~~~~~- 244 (360)
.++++|+++++.++-..+...++++.+.+.+.++++|...... +.++ ....+|++||..|+..|+|...
T Consensus 95 ~l~~~davviGPGlg~~~~~~~~~~~~l~~~~p~VlDAdal~~---------~~l~~~~~~~vlTPN~~E~~~L~g~~~~ 165 (279)
T 3rpz_A 95 LEETYRAIAIGPGLPQTESVQQAVDHVLTADCPVILDAGALAK---------RTYPKREGPVILTPHPGEFFRMTGVPVN 165 (279)
T ss_dssp CSSCCSEEEECTTCCCCHHHHHHHHHHTTSSSCEEECGGGCCS---------CCCCCCSSCEEECCCHHHHHHHHCCCHH
T ss_pred hccCCCEEEECCCCCCCHHHHHHHHHHHhhCCCEEEECCccch---------hhhhhccCCEEEecCHHHHHHHhCCCcc
Confidence 3578899999954434456677788777788899999965321 1221 1267999999999999998641
Q ss_pred --CCcHHH-HHHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHHHHHH
Q 018120 245 --NADSEA-ALEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEECCKVG 321 (360)
Q Consensus 245 --~~~~~~-~~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a~~~a 321 (360)
.++..+ +.++.+++. .+|+-.|.. .+++++++.+++... ......+.|+||++.|.+...+.+|+++.+|+..|
T Consensus 166 ~~~~d~~~aa~~la~~~~-~~VvlKG~~-~vi~~~~g~~~~~~~-g~~~~at~GtGD~Lag~iaa~lA~g~~~~~A~~~a 242 (279)
T 3rpz_A 166 ELQKKRAEYAKEWAAQLQ-TVIVLKGNQ-TVIAFPDGDCWLNPT-GNGALAKGGTGDTLTGMILGMLCCHEDPKHAVLNA 242 (279)
T ss_dssp HHTTSHHHHHHHHHHHHT-SEEEECSTT-CEEECTTSCEEECCC-CCGGGCSTTHHHHHHHHHHHHHHHCSSHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHcC-eEEEEeCCC-cEEECCCceEEEeCC-CCCCCCCCChHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 123333 444444443 355556653 455565544445444 35567899999987665555567999999999998
Q ss_pred HH----HhcchhcccC
Q 018120 322 SC----SGGSVIRSLG 333 (360)
Q Consensus 322 ~~----aaa~~v~~~G 333 (360)
.. ++-...+..|
T Consensus 243 ~~lh~~Ag~~a~~~~g 258 (279)
T 3rpz_A 243 VYLHGACAELWTDEHS 258 (279)
T ss_dssp HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhcC
Confidence 75 3333444445
No 67
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=98.95 E-value=7.1e-09 Score=93.61 Aligned_cols=152 Identities=11% Similarity=0.089 Sum_probs=93.9
Q ss_pred cCCCcEEEEeeccc-CHHHHHHHHHHHHH--CCCeEEEeCCChhHHHhhhHHHHHh-hccCCccEEEcCHHHHHHhhcCC
Q 018120 168 VKGSKWLVLRFGMF-NFEVIQAAIRIAKQ--EGLSVSMDLASFEMVRNFRTPLLQL-LESGDVDLCFANEDEAAELVRGE 243 (360)
Q Consensus 168 ~~~~~~v~~~~~~~-~~~~~~~~~~~a~~--~~~~v~~d~~~~~~~~~~~~~l~~~-l~~~~~dil~~n~~E~~~l~~~~ 243 (360)
++..|.+.++.+.. ..+....+.+..+. .+.++++|++........ . ++ ++ ..++||+||..|+..|+|..
T Consensus 123 ~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~g~~ll~~~-~---~l~L~-~~~~viTPN~~E~~~L~g~~ 197 (311)
T 3bgk_A 123 ITAADVVLMGPGLAEDDLAQTTFDVVWQAIEPKQTLIIDGSAINLLAKR-K---PAIWP-TKQIILTPHQKEWERLSGLT 197 (311)
T ss_dssp HHHCSEEEECTTCCSSHHHHHHHHHHHHHCCTTSEEEEETHHHHHHHHC-C----CCCS-CSCEEEECCSCC-CTTTCCC
T ss_pred hccCCEEEEcCCCCCCHHHHHHHHHHHHHcCCCCeEEEeCChhhhhccC-h---hhcCC-CCCEEECCcHHHHHHHhCCC
Confidence 45678999984333 34333333333333 478999999643222111 0 11 32 16899999999999999865
Q ss_pred CCC---cH-HHHHHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHH-Hc-CCCHHHH
Q 018120 244 ENA---DS-EAALEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGL-VK-GLSLEEC 317 (360)
Q Consensus 244 ~~~---~~-~~~~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l-~~-~~~l~~a 317 (360)
..+ +. .++.+.+.+ ..+|+..| .+.++++++.. ++... .....+++|+||+| +|+++++ .+ |+++.+|
T Consensus 198 ~~~~~~d~~~~aa~~l~~--g~~VvlkG-~~~~i~~~~~~-~~~~~-~~~~~~t~GtGD~L-ag~iaa~lA~~g~~~~eA 271 (311)
T 3bgk_A 198 IPEQIEAATQTALAHFPK--ETILVAKS-HQTKIYQGQKI-GHIQV-GGPYQATGGMGDTL-AGMIAGFVAQFHTDRFEV 271 (311)
T ss_dssp STTCCHHHHHHHHTTSCT--TCEEEECS-SSCEEEETTEE-EEECC-CCGGGCSTTHHHHH-HHHHHHHHHHCCSCHHHH
T ss_pred CCcchhhHHHHHHHHHhc--CCEEEEeC-CCeEEEECCEE-EEECC-CCCCCCCCcHHHHH-HHHHHHHHHccCCCHHHH
Confidence 322 22 233333333 34566666 56666674444 44444 46778999999997 5666665 68 9999999
Q ss_pred HHHHHHHhcchhc
Q 018120 318 CKVGSCSGGSVIR 330 (360)
Q Consensus 318 ~~~a~~aaa~~v~ 330 (360)
+.+|.++.+...+
T Consensus 272 ~~~A~~~~~~ag~ 284 (311)
T 3bgk_A 272 AAAAVFLHSYIAD 284 (311)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999877666443
No 68
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=98.68 E-value=3.3e-07 Score=80.19 Aligned_cols=154 Identities=16% Similarity=0.104 Sum_probs=94.8
Q ss_pred cccCCCcEEEEeecccCHHH---HHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcC
Q 018120 166 EDVKGSKWLVLRFGMFNFEV---IQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRG 242 (360)
Q Consensus 166 ~~~~~~~~v~~~~~~~~~~~---~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~ 242 (360)
+..+.++.++++.+.+.++. +....+.+++.++++++||..........+...+++.. ++++|.+|..|+..|.|.
T Consensus 52 e~~~~a~al~iNiGtl~~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~~~~~~ll~~-~~~vIrgN~sEi~~L~g~ 130 (265)
T 3hpd_A 52 EMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSR-GVDVLKGNFGEISALLGE 130 (265)
T ss_dssp HHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHH-CCSEEEEEHHHHHHHHHH
T ss_pred HHHHHCCeEEEECCCCChHHHHHHHHHHHHHHHcCCCEEEcCCCCCCcHHHHHHHHHHHhc-CCcEEcCCHHHHHHHhcc
Confidence 44567889999966666544 44555778889999999997654332223344555554 789999999999999873
Q ss_pred CC--------C---CcHHHHHHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcC
Q 018120 243 EE--------N---ADSEAALEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKG 311 (360)
Q Consensus 243 ~~--------~---~~~~~~~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~ 311 (360)
.. . ++..++.+.+.+....+++-.|+.- ++.++++.+.++.-. ..--..+|.||++.|.+.+.+.++
T Consensus 131 ~~~~~gvds~~~~~~d~~~~a~~lA~~~~~vVvlkG~~d-~I~dg~~~~~~~~G~-~~m~~vtGtGc~Lsg~iaa~lA~~ 208 (265)
T 3hpd_A 131 EGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTGAVD-YVSDGRRTFAVYNGH-ELLGRVTGTGCMVAALTGAFVAVT 208 (265)
T ss_dssp HC----------CHHHHHHHHHHHHHHTTSEEEEESSSE-EEECSSCEEEECCCC-GGGGGSTTHHHHHHHHHHHHHTTS
T ss_pred cCCCCCccCccccHHHHHHHHHHHHHHhCCEEEEeCCCe-EEEcCCEEEEECCCC-hHhhcCCccchHHHHHHHHHHhcC
Confidence 21 1 1222334444443344444456543 444566666666542 222334899999766555545555
Q ss_pred CCHHHHHHHHHH
Q 018120 312 LSLEECCKVGSC 323 (360)
Q Consensus 312 ~~l~~a~~~a~~ 323 (360)
+..+|...|..
T Consensus 209 -~~~~Aa~~a~~ 219 (265)
T 3hpd_A 209 -EPLKATTSALV 219 (265)
T ss_dssp -CHHHHHHHHHH
T ss_pred -ChHHHHHHHHH
Confidence 55566665543
No 69
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=98.67 E-value=2e-06 Score=80.82 Aligned_cols=161 Identities=13% Similarity=0.100 Sum_probs=92.1
Q ss_pred ceEecCchHHHHHHHHHhhcCC-ceEEEEeecCChhHHHHHHHHHhCCCeecee-----------e-ecC-CCCeeEEEE
Q 018120 74 IKTIAGGSVTNTIRGLSVGFGV-PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRL-----------R-MKR-GPTGQCVCL 139 (360)
Q Consensus 74 ~~~~~GG~a~N~a~~la~~lG~-~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i-----------~-~~~-~~t~~~~~~ 139 (360)
.+.+.||+|.-+|..|+. +|. +|.+.+..+.. ...+.| ..+|..-.. . ..+ .+.-.-+++
T Consensus 112 ~~~~~GGnA~imAn~La~-lg~~~Vi~~~p~~sk----~~~~ll-~~~i~~p~~e~g~l~l~~~~ea~~~~~~~~iH~I~ 185 (474)
T 3drw_A 112 EEERLGGQAGIIANTLAG-LKIRKVIAYTPFLPK----RLAELF-KKGVLYPVVENGELQFKPIQEAYREGDPLKINRIF 185 (474)
T ss_dssp SEEEEESHHHHHHHHHHH-TTCSEEEECCSCCCH----HHHTTS-CTTEEEEEESSSSEEEEEGGGCCCTTCCCCEEEEE
T ss_pred ceEecCChHHHHHHHHHH-cCCCcEEEecCcCCH----HHHHhc-CCcceeecccCCceeecCchhhhccCCCCCcEEEE
Confidence 467899999999999999 999 47777766653 233333 222222100 0 000 112233333
Q ss_pred EcCCCc---------------eeeeccccccc-CCC-cccCCc---cccCCCcEEEEe-ecccCH------------HHH
Q 018120 140 VDASGN---------------RTMRPCLSNAV-KIQ-ADELIA---EDVKGSKWLVLR-FGMFNF------------EVI 186 (360)
Q Consensus 140 ~~~~g~---------------r~~~~~~~~~~-~~~-~~~~~~---~~~~~~~~v~~~-~~~~~~------------~~~ 186 (360)
-.+.|+ |-++.+...+. .+. .+++.. +..+.+|.++++ +-.+.. +-.
T Consensus 186 Ey~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~~e~f~~~l~e~~~~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~ 265 (474)
T 3drw_A 186 EFRKGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIKPFLGEIGKEVDGAIFSGYQGLRTKYSDGKDANYYLRRA 265 (474)
T ss_dssp EECTTCEEESSSCEEECCSCEEEEEEECCSGGGCCSCCTTTGGGHHHHHHHCSEEEECCGGGCCSBCTTSCBHHHHHHHH
T ss_pred EcCCCCeeecCCceEEccCCCeEEEEcCCCCHHhccccHHHHHHHHHhhcCCCEEEEeccccccccccccccHHHHHHHH
Confidence 333333 33333333333 332 233321 222368999999 433332 222
Q ss_pred HHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcC
Q 018120 187 QAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRG 242 (360)
Q Consensus 187 ~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~ 242 (360)
.+.++..+..++++-|..++.....-.+.-+..+++ ++|.+-+|++|+..+.+.
T Consensus 266 ~e~i~~l~~~~~~iH~E~As~~~~~l~~~i~~~i~p--~vDSlGmNEqELa~l~~~ 319 (474)
T 3drw_A 266 KEDIIEFKEKDVKIHVEFASVQDRKLRKKIITNILP--FVDSVGIDEAEIAQILSV 319 (474)
T ss_dssp HHHHHHHHHTTCEEEEECCCCSCHHHHHHHHHHTGG--GSSEEEEEHHHHHHHHHH
T ss_pred HHHHHHhcCCCCeEEEEeCccccHHHHHHHHHHhcc--cccccccCHHHHHHHHHH
Confidence 344455567899999999865433333344557888 899999999999988763
No 70
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=98.55 E-value=2e-06 Score=83.15 Aligned_cols=158 Identities=19% Similarity=0.073 Sum_probs=100.7
Q ss_pred cccCC-CcEEEEeeccc-CHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCC
Q 018120 166 EDVKG-SKWLVLRFGMF-NFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGE 243 (360)
Q Consensus 166 ~~~~~-~~~v~~~~~~~-~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~ 243 (360)
+..+. ++.++++.+++ +.+.+..+++.+++.+.++++||..........+...++++...++||.+|..|+..|+|..
T Consensus 301 e~~~~~~~alvin~G~l~~~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r~~~~~~Ll~~~~~~vItpN~~E~~~L~g~~ 380 (540)
T 3nl6_A 301 DLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAELN 380 (540)
T ss_dssp HHTTSTTCEEEEESSCSCCHHHHHHHHHHHHTTTCCEEEECTTCTTSHHHHHHHHHHTTSCCCSEEEECHHHHHHHTTC-
T ss_pred HHHhccCCeEEEeCCCCCHHHHHHHHHHHHHHcCCCEEEChHHhhcccccHHHHHHHHhhCCCeEECCCHHHHHHHhCCC
Confidence 34566 89999994443 46778888888999999999999754432222233445655336899999999999999853
Q ss_pred C-------------CCcHHHHHHHHHcCCCEEEEEeCCCceEEEEC-------------------CEEEEeCCcCCCccc
Q 018120 244 E-------------NADSEAALEFLAKRCQWAVVTLGPNGCIAKHG-------------------KEIVKVPAIGEAKAI 291 (360)
Q Consensus 244 ~-------------~~~~~~~~~~l~~~~~~vivt~G~~G~~~~~~-------------------~~~~~~~~~~~~~vv 291 (360)
. .++..++.+.+.+....+|+-.|+.-. ++++ +..+.++.-...---
T Consensus 381 ~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~vVvlkG~~D~-I~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~m~ 459 (540)
T 3nl6_A 381 KERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEFDF-IADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPIEIMG 459 (540)
T ss_dssp -------------CCHHHHHHHHHHHHHTTSEEEECSSSEE-EEECCGGGBCCSSSCCSSCCTTSSCEEEEECSCCGGGG
T ss_pred cccccccccccccCHHHHHHHHHHHHHHhCCEEEEcCCCeE-EECCCccccccccccccccccCCccEEEECCCChhhcc
Confidence 1 012223333444433345555555433 3344 455666543101122
Q ss_pred CCCCccHHhHHHHHHHHHcCC---CHHHHHHHHHHH
Q 018120 292 DATGAGDLFASGFLYGLVKGL---SLEECCKVGSCS 324 (360)
Q Consensus 292 dttGAGD~f~ag~~~~l~~~~---~l~~a~~~a~~a 324 (360)
.++|.||++.|.+.+.+..+. ++.+|+..|...
T Consensus 460 ~vtGtGc~Lsg~Iaa~la~~~~~~~~~~Aa~~a~~~ 495 (540)
T 3nl6_A 460 DITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVML 495 (540)
T ss_dssp SSTTHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHH
T ss_pred CccCchHHHHHHHHHHHhcCcCCCCHHHHHHHHHHH
Confidence 469999999988877788877 578887776554
No 71
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=98.34 E-value=6.1e-05 Score=70.91 Aligned_cols=157 Identities=13% Similarity=0.030 Sum_probs=91.8
Q ss_pred EecCchHHHHHHHHHhhcCCceEE--EEeecCChhHHHHHHHHHhCCCeeceee------------ecCCCCeeEEEEEc
Q 018120 76 TIAGGSVTNTIRGLSVGFGVPCGL--IGAYGDDQQGQLFVSNMQFSGVDVSRLR------------MKRGPTGQCVCLVD 141 (360)
Q Consensus 76 ~~~GG~a~N~a~~la~~lG~~v~~--ig~vG~D~~g~~i~~~l~~~gv~~~~i~------------~~~~~t~~~~~~~~ 141 (360)
.+.||++..+|..|+. +|.++.+ ++.+|. .+++.|...+|..-.+. ....+...-+++-.
T Consensus 108 ~~~GGnA~imAn~la~-lg~~~vl~~~~~l~~-----~~~~lf~~~~i~~p~~~~~~~~l~~~~e~~~~~~~~iH~I~Ef 181 (455)
T 1ua4_A 108 LRMGGQAGIMANLLGG-VYGVPVIVHVPQLSR-----LQANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENCIHYIYEF 181 (455)
T ss_dssp EEEESHHHHHHHHHTT-TTCCCEEECCSCCCH-----HHHTTSCSSSEEEEEEETTEEEEECGGGCSCCCCCCEEEEEEE
T ss_pred cccCCcHHHHHHHHHH-cCCCEEEEeCCCCCH-----HHHHhcCCCCeEeecccCCccccccchhhccCCCCCceEEEEc
Confidence 3999999999999999 9999877 666555 34444442344431110 00224555555555
Q ss_pred CCCceee-----------ecccccccCCC-cccCCc---cccCCCcEEEEe-ecccCH----HHHHHHHH---HHHHCCC
Q 018120 142 ASGNRTM-----------RPCLSNAVKIQ-ADELIA---EDVKGSKWLVLR-FGMFNF----EVIQAAIR---IAKQEGL 198 (360)
Q Consensus 142 ~~g~r~~-----------~~~~~~~~~~~-~~~~~~---~~~~~~~~v~~~-~~~~~~----~~~~~~~~---~a~~~~~ 198 (360)
+.|++-. ..+...+..+. .+++.. +...++|.++++ +-++.. +.....++ ..+..+.
T Consensus 182 ~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~~ 261 (455)
T 1ua4_A 182 PRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNEREI 261 (455)
T ss_dssp CTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCCc
Confidence 5665322 12211222222 122211 223459999999 444432 22322222 2256789
Q ss_pred eEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhc
Q 018120 199 SVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVR 241 (360)
Q Consensus 199 ~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~ 241 (360)
++.|++++.....-.+.-+ .+++ ++|.+-+|+.|+..+.+
T Consensus 262 ~iH~ElAs~~~~~~~~~i~-~ilp--~vDSlGmNE~EL~~l~~ 301 (455)
T 1ua4_A 262 PVHLEFAFTPDEKVREEIL-NVLG--MFYSVGLNEVELASIME 301 (455)
T ss_dssp CEEEECCCCCCHHHHHHHH-HHGG--GCSEEEECHHHHHHHHH
T ss_pred eEEEEeCCccCHHHHHHHH-hhhc--cCcccccCHHHHHHHHH
Confidence 9999998754433333444 8888 99999999999987764
No 72
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=98.16 E-value=3.1e-05 Score=72.73 Aligned_cols=154 Identities=15% Similarity=0.037 Sum_probs=84.5
Q ss_pred ecCchHHHHHHHHHhhcCCceEE--EEeecCChhHHHHHHHHHhCCCeeceeee------------cCCCCeeEEEEEcC
Q 018120 77 IAGGSVTNTIRGLSVGFGVPCGL--IGAYGDDQQGQLFVSNMQFSGVDVSRLRM------------KRGPTGQCVCLVDA 142 (360)
Q Consensus 77 ~~GG~a~N~a~~la~~lG~~v~~--ig~vG~D~~g~~i~~~l~~~gv~~~~i~~------------~~~~t~~~~~~~~~ 142 (360)
+.||+|.-+|..|+. +|.++.+ .+.+| +..++.|...+|..-.+.- ...+.-.-+++-.+
T Consensus 112 ~mGGnA~imAn~la~-lg~~~vl~~~~~~s-----~~~~~l~~~~~i~~p~~~~g~l~l~~~~e~~~~~~~~iH~I~Ey~ 185 (457)
T 1l2l_A 112 RMGGQVGIMANLLGG-VYGIPVIAHVPQLS-----ELQASLFLDGPIYVPTFERGELRLIHPREFRKGEEDCIHYIYEFP 185 (457)
T ss_dssp EEESHHHHHHHHHTT-TSCCCEEECCSSCC-----HHHHHTSCSSSEEEEC------CEECGGGC----CCCEEECCEEC
T ss_pred ccCchHHHHHHHHHH-cCCCEEEEcCCCCC-----HHHHHhcCCCCeEeeeccCCceeccCchhhccCCCCcceEEEEcC
Confidence 999999999999999 9999866 44444 3445555423333110000 00112222222223
Q ss_pred CCc-----------eeeecccccccCCC-cccCC---ccccCCCcEEEEe-ecccCH----H---HHHHHHHHHHHCCCe
Q 018120 143 SGN-----------RTMRPCLSNAVKIQ-ADELI---AEDVKGSKWLVLR-FGMFNF----E---VIQAAIRIAKQEGLS 199 (360)
Q Consensus 143 ~g~-----------r~~~~~~~~~~~~~-~~~~~---~~~~~~~~~v~~~-~~~~~~----~---~~~~~~~~a~~~~~~ 199 (360)
.|+ |-+..+...+..+. .+++. .+...++|.+++| +-.+.. . ...+.++..+..+++
T Consensus 186 ~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~~~ 265 (457)
T 1l2l_A 186 RNFKVLDFEAPRENRFIGAADDYNPILYVREEWIERFEEIAKRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIR 265 (457)
T ss_dssp TTCEETTEECSSCEEEEEEECSSGGGTCCCHHHHHSHHHHHTTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCeecceecCCCCeEEEEcCCCCCCCcccHHHHHHHHhhccCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCCCe
Confidence 333 33333322222222 11111 1223669999999 433332 1 122223333668999
Q ss_pred EEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHh
Q 018120 200 VSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAEL 239 (360)
Q Consensus 200 v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l 239 (360)
+-|..++.....-.+.-+ .+++ ++|.+-+|++|+..+
T Consensus 266 iH~E~As~~~~~l~~~i~-~ilp--~vDSlGmNEqELa~l 302 (457)
T 1l2l_A 266 AHLEFAFTPDEVVRLEIV-KLLK--HFYSVGLNEVELASV 302 (457)
T ss_dssp EEEECCCCSSHHHHHHHH-HHGG--GCSEEEECHHHHHHH
T ss_pred EEEEECCcccHHHHHHHH-hhcc--ccccCccCHHHHHHH
Confidence 999998654333333444 8888 999999999999875
No 73
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=98.15 E-value=3.2e-05 Score=72.77 Aligned_cols=155 Identities=12% Similarity=0.058 Sum_probs=85.6
Q ss_pred ecCchHHHHHHHHHhhcCCceEE--EEeecCChhHHHHHHHHHhCCCeeceeee------------cCCCCeeEEEEEcC
Q 018120 77 IAGGSVTNTIRGLSVGFGVPCGL--IGAYGDDQQGQLFVSNMQFSGVDVSRLRM------------KRGPTGQCVCLVDA 142 (360)
Q Consensus 77 ~~GG~a~N~a~~la~~lG~~v~~--ig~vG~D~~g~~i~~~l~~~gv~~~~i~~------------~~~~t~~~~~~~~~ 142 (360)
+.||+|.-+|..|+. +|.++.+ .+.+| +..++.|...+|..-.+.- ...+.-.-+++-.+
T Consensus 117 ~mGGnAgimAn~la~-lg~~~vl~~~~~~s-----~~~~~l~~~~~i~~p~~~~g~l~~~~~~ea~~~~~~~iH~I~Ey~ 190 (467)
T 1gc5_A 117 RIGGQAGIMANLLGG-VYRIPTIVHVPQNP-----KLQAELFVDGPIYVPVFEGNKLKLVHPKDAIAEEEELIHYIYEFP 190 (467)
T ss_dssp EEESHHHHHHHHHHH-TSCCCEEECCSCCC-----HHHHTTSCSSSEEEEEECSSCEEEECGGGSCCSCCCCEEEEEEEC
T ss_pred ccCccHHHHHHHHHh-cCCCEEEEcCCCCC-----HHHHHhcCCCCeeeeeccCCceecccchhhccCCCCcceEEEEcC
Confidence 999999999999999 9999866 44444 4445555423343211000 01223333444334
Q ss_pred CCce-----------eeecccccccCCCc-ccCC---ccccCCCcEEEEe-ecccCH---------HHHH---HHHHHHH
Q 018120 143 SGNR-----------TMRPCLSNAVKIQA-DELI---AEDVKGSKWLVLR-FGMFNF---------EVIQ---AAIRIAK 194 (360)
Q Consensus 143 ~g~r-----------~~~~~~~~~~~~~~-~~~~---~~~~~~~~~v~~~-~~~~~~---------~~~~---~~~~~a~ 194 (360)
.|++ -+..+...+..+.. +++. .+...++|.+++| +-++.. +-+. +.++...
T Consensus 191 ~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~l~ 270 (467)
T 1gc5_A 191 RGFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILN 270 (467)
T ss_dssp SSCEETTEECSSCEEEEEECCSSTTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHH
T ss_pred CCCeecceeccCCceEEEecCCCCccccccHHHHHHHHhhccCCCEEEEechhcccCccCCchhHHHHHHHHHHHHHhhc
Confidence 4442 22222222222211 1111 1223669999999 322221 1222 2222224
Q ss_pred HCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhh
Q 018120 195 QEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELV 240 (360)
Q Consensus 195 ~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~ 240 (360)
..++++-|..++.... .++..+..+++ ++|.+-+|++|+..+.
T Consensus 271 ~~~~~iH~E~As~~~~-~l~~~i~~ilp--~vDSlGmNEqELa~l~ 313 (467)
T 1gc5_A 271 RYNVKSHFEFAYTANR-RVREALVELLP--KFTSVGLNEVELASIM 313 (467)
T ss_dssp HTTCEEEEECCCCCCH-HHHHHHHHHGG--GCSEEEECHHHHHHHH
T ss_pred CCCCeEEEEECCcccH-HHHHHHHhhcc--ccccCccCHHHHHHHH
Confidence 5789999999865433 33343348888 9999999999998544
No 74
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=97.89 E-value=0.00012 Score=69.65 Aligned_cols=146 Identities=17% Similarity=0.117 Sum_probs=90.2
Q ss_pred cCCCcEEEEeeccc-CHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcC----
Q 018120 168 VKGSKWLVLRFGMF-NFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRG---- 242 (360)
Q Consensus 168 ~~~~~~v~~~~~~~-~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~---- 242 (360)
.+++|.+++..++- ....+.+++ +.. ++++|-.... . ..+.+.++ ...|+.||..|+..|++.
T Consensus 290 ~~~~~a~~iGPGlG~~~~~l~~~l----~~~-p~VlDADaL~----~-~~~~~~~~--~~~VlTPh~~E~~rL~g~~~~~ 357 (475)
T 3k5w_A 290 PNLLSAFALGMGLENIPKDFNRWL----ELA-PCVLDAGVFY----H-KEILQALE--KEAVLTPHPKEFLSLLNLVGIN 357 (475)
T ss_dssp CSSCSEEEECTTCSSCCTTHHHHH----HHS-CEEEEGGGGG----S-GGGGTTTT--SSEEEECCHHHHHHHHHHTSCC
T ss_pred ccCCCEEEEcCCCCCCHHHHHHHH----hcC-CEEEECcccC----C-chhhhccC--CCEEECCCHHHHHHHhCCccCC
Confidence 36789999993321 111133333 235 9999996432 1 22233344 568999999999999975
Q ss_pred -CCCC---cH-HHHHHHHHcCCCEEEEEeCCCceEEEECCEEEEeCCcCCCcccCCCCccHHhHHHHHHHHHcCCCHHHH
Q 018120 243 -EENA---DS-EAALEFLAKRCQWAVVTLGPNGCIAKHGKEIVKVPAIGEAKAIDATGAGDLFASGFLYGLVKGLSLEEC 317 (360)
Q Consensus 243 -~~~~---~~-~~~~~~l~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~ag~~~~l~~~~~l~~a 317 (360)
...+ +. +.+.++.++....+|+-.|..-. +++++..+..+.- ..-..+.|.||++.|.+.+.+.++.++.+|
T Consensus 358 v~~~~~~~d~~~aa~~la~~~g~~~VvlKG~~~v-I~~~~~~~~~~~g--~~~mat~GtGdvLsg~Iaa~lA~g~~~~~A 434 (475)
T 3k5w_A 358 ISMLELLDNKLEIARDFSQKYPKVVLLLKGANTL-IAHQGQVFINILG--SVALAKAGSGDVLAGLILSLLSQNYTPLDA 434 (475)
T ss_dssp CCTTSGGGSCC--CHHHHHHCTTEEEEECSSSEE-EEETTEEEEECCC--CGGGCSTTHHHHHHHHHHHHHHTTCCHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHcCCeEEEEeCCCCE-EECCCEEEEECCC--CCCCCCCCHHHHHHHHHHHHHHcCCCHHHH
Confidence 2111 22 33444444442556666665543 4456655544432 344568999999999988889999999999
Q ss_pred HHHHHHHhcch
Q 018120 318 CKVGSCSGGSV 328 (360)
Q Consensus 318 ~~~a~~aaa~~ 328 (360)
+..|...-+.+
T Consensus 435 a~~a~~lhg~a 445 (475)
T 3k5w_A 435 AINASLAHALA 445 (475)
T ss_dssp HHHHHHHHHHG
T ss_pred HHHHHHHHHHH
Confidence 88876554443
No 75
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=65.31 E-value=60 Score=27.64 Aligned_cols=93 Identities=18% Similarity=0.227 Sum_probs=54.9
Q ss_pred CCcEEEEeecccCHHHHHHHHHHHHHCCCeEEE---eCCChhHHHhhhHHHHHhhccCCccEEEc-----CHHHHHHhhc
Q 018120 170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSM---DLASFEMVRNFRTPLLQLLESGDVDLCFA-----NEDEAAELVR 241 (360)
Q Consensus 170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~---d~~~~~~~~~~~~~l~~~l~~~~~dil~~-----n~~E~~~l~~ 241 (360)
.+|++=+.. ..+.+...++++.+++.+.++++ |....+..+.+...+.++... .+||++. +.++...|+.
T Consensus 113 ~~d~iDvEl-~~~~~~~~~l~~~a~~~~~kiI~S~Hdf~~TP~~~el~~~~~~~~~~-gaDIvKia~~~~~~~D~l~Ll~ 190 (258)
T 4h3d_A 113 LVDLIDVEL-FMGDEVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRLCRMQEL-GADLPKIAVMPQNEKDVLVLLE 190 (258)
T ss_dssp CCSEEEEEG-GGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHT-TCSEEEEEECCSSHHHHHHHHH
T ss_pred CchhhHHhh-hccHHHHHHHHHHHHhCCCEEEEEEecCCCCCCHHHHHHHHHHHHHh-CCCEEEEEEccCCHHHHHHHHH
Confidence 367777773 34678888999999999988776 333322223344445555543 6798876 3344333321
Q ss_pred CCCCCcHHHHHHHHH--cCCCEEEEEeCCCceE
Q 018120 242 GEENADSEAALEFLA--KRCQWAVVTLGPNGCI 272 (360)
Q Consensus 242 ~~~~~~~~~~~~~l~--~~~~~vivt~G~~G~~ 272 (360)
...+... ...+.+.+.||+.|.+
T Consensus 191 --------~~~~~~~~~~~~P~I~~~MG~~G~~ 215 (258)
T 4h3d_A 191 --------ATNEMFKIYADRPIITMSMSGMGVI 215 (258)
T ss_dssp --------HHHHHHHHTCSSCBEEEECTGGGGG
T ss_pred --------HHHHHHHhcCCCCEEEEeCCCCChH
Confidence 1111111 2456788999998853
No 76
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=65.03 E-value=67 Score=27.61 Aligned_cols=60 Identities=10% Similarity=0.125 Sum_probs=47.6
Q ss_pred cccCCCcEEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCH
Q 018120 166 EDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANE 233 (360)
Q Consensus 166 ~~~~~~~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~ 233 (360)
.....+|.+++....++.+.+.++++.+++.|..+.++..+ .+.+...+.. .+|++-.|.
T Consensus 138 a~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh~-------~eEl~~A~~~-ga~iIGinn 197 (272)
T 3tsm_A 138 ARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVHD-------EAEMERALKL-SSRLLGVNN 197 (272)
T ss_dssp HHHTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEECS-------HHHHHHHTTS-CCSEEEEEC
T ss_pred HHHcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeCC-------HHHHHHHHhc-CCCEEEECC
Confidence 34578999999866668889999999999999999999965 3556655554 789998874
No 77
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=60.78 E-value=64 Score=27.47 Aligned_cols=64 Identities=9% Similarity=0.057 Sum_probs=49.5
Q ss_pred ccccCCCcEEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHH
Q 018120 165 AEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEA 236 (360)
Q Consensus 165 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~ 236 (360)
+...-.+|++++-...++.+.+.++++.|++.|.-+.++..+ .+.+...+.. .++++-.|-..+
T Consensus 121 eAr~~GADaILLI~a~L~~~~l~~l~~~A~~lGl~~LvEVh~-------~~El~rAl~~-~a~iIGINNRnL 184 (258)
T 4a29_A 121 DAYNLGADTVLLIVKILTERELESLLEYARSYGMEPLILIND-------ENDLDIALRI-GARFIGIMSRDF 184 (258)
T ss_dssp HHHHHTCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEEEESS-------HHHHHHHHHT-TCSEEEECSBCT
T ss_pred HHHHcCCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHHhcch-------HHHHHHHhcC-CCcEEEEeCCCc
Confidence 344568899888766778999999999999999999999965 3556655554 789988875443
No 78
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=57.27 E-value=30 Score=30.94 Aligned_cols=91 Identities=18% Similarity=0.261 Sum_probs=51.2
Q ss_pred ceEEEEeecCChhHHHHHHHHHhCCC---eeceeeecCCCCeeEEEEEcCCCceeeecccccccCCCcccCCccccCCCc
Q 018120 96 PCGLIGAYGDDQQGQLFVSNMQFSGV---DVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSK 172 (360)
Q Consensus 96 ~v~~ig~vG~D~~g~~i~~~l~~~gv---~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (360)
++.++|.-| ..|..+.+.|.++.. +..++. +....|..+.+ .|. . +..++...+.+.++|
T Consensus 3 ~VaIvGatG--~vG~el~~lL~~h~fp~~el~~~~-s~~~aG~~~~~---~~~-~----------~~~~~~~~~~~~~~D 65 (344)
T 3tz6_A 3 SIGIVGATG--QVGQVMRTLLDERDFPASAVRFFA-SARSQGRKLAF---RGQ-E----------IEVEDAETADPSGLD 65 (344)
T ss_dssp EEEEETTTS--HHHHHHHHHHHHTTCCEEEEEEEE-CTTTSSCEEEE---TTE-E----------EEEEETTTSCCTTCS
T ss_pred EEEEECCCC--hHHHHHHHHHHhCCCCceEEEEEE-CcccCCCceee---cCC-c----------eEEEeCCHHHhccCC
Confidence 444444433 369999999998742 233222 12234444432 111 1 111222233457789
Q ss_pred EEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCCh
Q 018120 173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASF 207 (360)
Q Consensus 173 ~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~ 207 (360)
+++++ .+.....+....+.+.|+ .++|.++.
T Consensus 66 vvf~a---~~~~~s~~~a~~~~~~G~-~vID~Sa~ 96 (344)
T 3tz6_A 66 IALFS---AGSAMSKVQAPRFAAAGV-TVIDNSSA 96 (344)
T ss_dssp EEEEC---SCHHHHHHHHHHHHHTTC-EEEECSST
T ss_pred EEEEC---CChHHHHHHHHHHHhCCC-EEEECCCc
Confidence 99887 246677777777778887 57788864
No 79
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=55.17 E-value=15 Score=27.31 Aligned_cols=78 Identities=5% Similarity=-0.023 Sum_probs=54.8
Q ss_pred CCcEEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHHHHhhcCCCCCcHH
Q 018120 170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEAAELVRGEENADSE 249 (360)
Q Consensus 170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~~~l~~~~~~~~~~ 249 (360)
.++++.+++. ++.+.+..+.+.++.+++.++.|+.... +..+..+.+.++ .+...+....+. |.+ .-+++
T Consensus 26 ~~~iI~t~Gs-i~~~~l~~I~~~~~~r~VIi~TD~D~~G--ekIRk~i~~~lp--~~~hafi~r~~~----gVE-~a~~~ 95 (119)
T 2fcj_A 26 PVVIVCTNGT-ISDARLEELADELEGYDVYLLADADEAG--EKLRRQFRRMFP--EAEHLYIDRAYR----EVA-AAPIW 95 (119)
T ss_dssp CCEEEECCSC-CCHHHHHHHHHHTTTSEEEEECCSSHHH--HHHHHHHHHHCT--TSEEECCCTTTC----STT-TSCHH
T ss_pred CCCEEEeCCc-cCHHHHHHHHHHhcCCCEEEEECCCccH--HHHHHHHHHHCC--CCcEEeccCCcc----Ccc-cCCHH
Confidence 5677777755 7888888888888888888888996543 467777888888 778888776653 433 23455
Q ss_pred HHHHHHHc
Q 018120 250 AALEFLAK 257 (360)
Q Consensus 250 ~~~~~l~~ 257 (360)
...+.|++
T Consensus 96 ~I~~aL~~ 103 (119)
T 2fcj_A 96 HLAQVLLR 103 (119)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 55555554
No 80
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=48.53 E-value=1.3e+02 Score=25.81 Aligned_cols=91 Identities=14% Similarity=0.177 Sum_probs=55.3
Q ss_pred CcEEEEeecccCHHHHHHHHHHHHHCCCeEEEe---CCChhHHHhhhHHHHHhhccCCccEEEc-----CHHHHHHhhcC
Q 018120 171 SKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMD---LASFEMVRNFRTPLLQLLESGDVDLCFA-----NEDEAAELVRG 242 (360)
Q Consensus 171 ~~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d---~~~~~~~~~~~~~l~~~l~~~~~dil~~-----n~~E~~~l~~~ 242 (360)
+|++=+.. ..+.+.+.++++.+++.+.+++.- .......+.+...+.++... .+||++. +.++...+.
T Consensus 134 ~dyIDvEl-~~~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~-GaDIvKia~~a~s~~Dvl~Ll-- 209 (276)
T 3o1n_A 134 VDMIDLEL-FTGDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQEL-GADIPKIAVMPQTKADVLTLL-- 209 (276)
T ss_dssp CSEEEEEG-GGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHT-TCSEEEEEECCSSHHHHHHHH--
T ss_pred CCEEEEEC-cCCHHHHHHHHHHHHhCCCEEEEEeecCCCCcCHHHHHHHHHHHHHc-CCCEEEEEecCCChHHHHHHH--
Confidence 78888873 236788899999999999988763 32222223455555555443 5799887 333333332
Q ss_pred CCCCcHHHHHHHHH---cCCCEEEEEeCCCceE
Q 018120 243 EENADSEAALEFLA---KRCQWAVVTLGPNGCI 272 (360)
Q Consensus 243 ~~~~~~~~~~~~l~---~~~~~vivt~G~~G~~ 272 (360)
.+...++ ...+.+.+.||+.|.+
T Consensus 210 -------~~~~~~~~~~~~~PlIa~~MG~~G~~ 235 (276)
T 3o1n_A 210 -------TATVEMQERYADRPIITMSMSKTGVI 235 (276)
T ss_dssp -------HHHHHHHHHTCCSCCEEEECSGGGTH
T ss_pred -------HHHHHHHhcCCCCCEEEEECCCchhh
Confidence 1111221 2457888999999843
No 81
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=45.89 E-value=93 Score=23.39 Aligned_cols=81 Identities=16% Similarity=0.176 Sum_probs=45.4
Q ss_pred EEeecC----ChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeecccccccCCCcccCCccccCCCcEEE
Q 018120 100 IGAYGD----DQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLV 175 (360)
Q Consensus 100 ig~vG~----D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 175 (360)
++.+|- ...|..+.+.|.+.|.++- -++++++. + .+....-+.+++. ...|+++
T Consensus 17 IavIGaS~~~g~~G~~~~~~L~~~G~~V~--------------~vnp~~~~-i---~G~~~~~s~~el~----~~vDlvi 74 (138)
T 1y81_A 17 IALVGASKNPAKYGNIILKDLLSKGFEVL--------------PVNPNYDE-I---EGLKCYRSVRELP----KDVDVIV 74 (138)
T ss_dssp EEEETCCSCTTSHHHHHHHHHHHTTCEEE--------------EECTTCSE-E---TTEECBSSGGGSC----TTCCEEE
T ss_pred EEEEeecCCCCCHHHHHHHHHHHCCCEEE--------------EeCCCCCe-E---CCeeecCCHHHhC----CCCCEEE
Confidence 455564 5689899999998887521 12222211 1 1111111223332 2568888
Q ss_pred EeecccCHHHHHHHHHHHHHCCCe-EEEeCC
Q 018120 176 LRFGMFNFEVIQAAIRIAKQEGLS-VSMDLA 205 (360)
Q Consensus 176 ~~~~~~~~~~~~~~~~~a~~~~~~-v~~d~~ 205 (360)
+. ++++...++++.+.+.|++ ++++++
T Consensus 75 i~---vp~~~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 75 FV---VPPKVGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp EC---SCHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred EE---eCHHHHHHHHHHHHHcCCCEEEEcCc
Confidence 75 4577888888777777765 455554
No 82
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=43.14 E-value=1.4e+02 Score=24.69 Aligned_cols=58 Identities=9% Similarity=0.090 Sum_probs=41.0
Q ss_pred ccCCCcEEEEeecc-cCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcC
Q 018120 167 DVKGSKWLVLRFGM-FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFAN 232 (360)
Q Consensus 167 ~~~~~~~v~~~~~~-~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n 232 (360)
.-..+|++++.... ..++.+.++++.+++.|..+..+.... +........ .+|++..|
T Consensus 98 ~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~-------eea~~a~~~-Gad~Ig~~ 156 (229)
T 3q58_A 98 AQAGADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCSTV-------NEGISCHQK-GIEFIGTT 156 (229)
T ss_dssp HHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECSSH-------HHHHHHHHT-TCSEEECT
T ss_pred HHcCCCEEEECccccCChHHHHHHHHHHHHCCCEEEEecCCH-------HHHHHHHhC-CCCEEEec
Confidence 34678999888332 346788899999999999999999754 333333333 78999653
No 83
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=41.04 E-value=72 Score=27.06 Aligned_cols=64 Identities=13% Similarity=0.135 Sum_probs=49.3
Q ss_pred cccCCCcEEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHH
Q 018120 166 EDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEA 236 (360)
Q Consensus 166 ~~~~~~~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~ 236 (360)
....++|++.+....++.+.+.++++.+++.|..+.+|..+. +.+...+....+|++-.|..++
T Consensus 119 a~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvEv~~~-------eE~~~A~~l~g~~iIGinnr~l 182 (251)
T 1i4n_A 119 ASSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVEVHSR-------EDLEKVFSVIRPKIIGINTRDL 182 (251)
T ss_dssp HHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEEECSH-------HHHHHHHTTCCCSEEEEECBCT
T ss_pred HHHcCCCEEEEecccCCHHHHHHHHHHHHHcCCeEEEEeCCH-------HHHHHHHhcCCCCEEEEeCccc
Confidence 345789999998666788999999999999999999999753 4555555520479998876554
No 84
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=40.14 E-value=1.9e+02 Score=25.95 Aligned_cols=92 Identities=15% Similarity=0.271 Sum_probs=51.1
Q ss_pred ceEEEEeecCChhHHHHHHHHHhCCCeeceee--ecCCCCeeEEEEEcCCCceeeecccccccCCCcccCCccccCCCcE
Q 018120 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLR--MKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKW 173 (360)
Q Consensus 96 ~v~~ig~vG~D~~g~~i~~~l~~~gv~~~~i~--~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (360)
++.++|.-| ..|..+.+.|.+++.....+. ......+..+.+ .|. .+..++++.+.+.++|+
T Consensus 4 kVaIvGATG--~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~---~~~-----------~~~~~~~~~~~~~~~Dv 67 (366)
T 3pwk_A 4 TVAVVGATG--AVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKF---KDQ-----------DITIEETTETAFEGVDI 67 (366)
T ss_dssp EEEEETTTS--HHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEE---TTE-----------EEEEEECCTTTTTTCSE
T ss_pred EEEEECCCC--hHHHHHHHHHhcCCCCcEEEEEEEccccCCCccee---cCC-----------CceEeeCCHHHhcCCCE
Confidence 344444433 479999999998754322221 112233333332 111 11122223334578899
Q ss_pred EEEeecccCHHHHHHHHHHHHHCCCeEEEeCCCh
Q 018120 174 LVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASF 207 (360)
Q Consensus 174 v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~ 207 (360)
++++ .+.....+....+.+.|++ ++|+++.
T Consensus 68 vf~a---~~~~~s~~~a~~~~~~G~~-vIDlSa~ 97 (366)
T 3pwk_A 68 ALFS---AGSSTSAKYAPYAVKAGVV-VVDNTSY 97 (366)
T ss_dssp EEEC---SCHHHHHHHHHHHHHTTCE-EEECSST
T ss_pred EEEC---CChHhHHHHHHHHHHCCCE-EEEcCCc
Confidence 9887 2466777777777788875 6788864
No 85
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=39.30 E-value=66 Score=27.62 Aligned_cols=62 Identities=11% Similarity=0.180 Sum_probs=45.1
Q ss_pred CCccccCCCcEEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcC
Q 018120 163 LIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFAN 232 (360)
Q Consensus 163 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n 232 (360)
+.......+|.|++.-..++++.+.++++.+++.|..++++..+. +.+...+.. .+|++-.|
T Consensus 128 v~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev~t~-------ee~~~A~~~-Gad~IGv~ 189 (272)
T 3qja_A 128 IHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTE-------QEADRALKA-GAKVIGVN 189 (272)
T ss_dssp HHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEEESSH-------HHHHHHHHH-TCSEEEEE
T ss_pred HHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEEcCCH-------HHHHHHHHC-CCCEEEEC
Confidence 333345688999996455678889999999999999999999764 233333332 68998887
No 86
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=38.86 E-value=1.7e+02 Score=24.28 Aligned_cols=57 Identities=12% Similarity=0.012 Sum_probs=40.6
Q ss_pred cCCCcEEEEeecc-cCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcC
Q 018120 168 VKGSKWLVLRFGM-FNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFAN 232 (360)
Q Consensus 168 ~~~~~~v~~~~~~-~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n 232 (360)
-..+|.+++.... ..++.+.++++.+++.|..+..+.... +........ .+|++..|
T Consensus 99 ~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~-------eea~~a~~~-Gad~Ig~~ 156 (232)
T 3igs_A 99 QAGAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCSSV-------DDGLACQRL-GADIIGTT 156 (232)
T ss_dssp HHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECCSH-------HHHHHHHHT-TCSEEECT
T ss_pred HcCCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCCCH-------HHHHHHHhC-CCCEEEEc
Confidence 4578999888322 345788899999999999999999764 333333333 78999654
No 87
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=38.55 E-value=1.4e+02 Score=23.24 Aligned_cols=65 Identities=8% Similarity=0.146 Sum_probs=41.2
Q ss_pred cEEEEee--cccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEc-----CHHHHHHhhcC
Q 018120 172 KWLVLRF--GMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFA-----NEDEAAELVRG 242 (360)
Q Consensus 172 ~~v~~~~--~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~-----n~~E~~~l~~~ 242 (360)
+.|.+++ .++.++.+.++++.+++.|..+.+..++... .+.+.++++ ..|.+.. +.+....+.|.
T Consensus 5 ~~v~~tGGEPll~~~~~~~l~~~~~~~g~~~~l~TNG~l~----~~~~~~l~~--~~d~v~isld~~~~~~~~~~~g~ 76 (182)
T 3can_A 5 GGVTFCGGEPLLHPEFLIDILKRCGQQGIHRAVDTTLLAR----KETVDEVMR--NCELLLIDLKSMDSTVHQTFCDV 76 (182)
T ss_dssp CCEEECSSTGGGSHHHHHHHHHHHHHTTCCEEEECTTCCC----HHHHHHHHH--TCSEEEEECCCSCHHHHHHHHSS
T ss_pred CEEEEEcccccCCHHHHHHHHHHHHHCCCcEEEECCCCCC----HHHHHHHHh--hCCEEEEECCCCCHHHHHHHhCC
Confidence 4456662 2345777789999999999999999876421 233444554 4666554 45555566654
No 88
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=34.32 E-value=88 Score=29.10 Aligned_cols=64 Identities=6% Similarity=0.031 Sum_probs=49.6
Q ss_pred ccccCCCcEEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCHHHH
Q 018120 165 AEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANEDEA 236 (360)
Q Consensus 165 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~~E~ 236 (360)
+.....+|++.+....++.+.+.++++.+++.|..+.++..+. +.+...+.. .+|++-.|...+
T Consensus 125 ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lgm~~LvEvh~~-------eE~~~A~~l-ga~iIGinnr~L 188 (452)
T 1pii_A 125 LARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVSNE-------EEQERAIAL-GAKVVGINNRDL 188 (452)
T ss_dssp HHHHTTCSEEEEETTTCCHHHHHHHHHHHHHTTCEEEEEECSH-------HHHHHHHHT-TCSEEEEESEET
T ss_pred HHHHcCCCEEEEEcccCCHHHHHHHHHHHHHcCCeEEEEeCCH-------HHHHHHHHC-CCCEEEEeCCCC
Confidence 3445789999999666788899999999999999999999753 455554443 688888876543
No 89
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=33.88 E-value=78 Score=28.57 Aligned_cols=38 Identities=18% Similarity=0.100 Sum_probs=29.0
Q ss_pred cccCCCcEEEEeecccCHHHHHHHHHHHHHCCC-eEEEeCCC
Q 018120 166 EDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGL-SVSMDLAS 206 (360)
Q Consensus 166 ~~~~~~~~v~~~~~~~~~~~~~~~~~~a~~~~~-~v~~d~~~ 206 (360)
+.+.++|+++++ .+.....+....+.+.|+ .+++|.++
T Consensus 60 ~~~~~~Dvvf~a---~~~~~s~~~~~~~~~~G~k~~VID~ss 98 (370)
T 3pzr_A 60 ESLKQLDAVITC---QGGSYTEKVYPALRQAGWKGYWIDAAS 98 (370)
T ss_dssp HHHTTCSEEEEC---SCHHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred hHhccCCEEEEC---CChHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 446789999887 345677777777778887 58999986
No 90
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=33.31 E-value=96 Score=28.25 Aligned_cols=36 Identities=14% Similarity=0.228 Sum_probs=23.8
Q ss_pred CCcEEEEee-cc--cCHHHHHHHHHHHHH--CCCeEEEeCC
Q 018120 170 GSKWLVLRF-GM--FNFEVIQAAIRIAKQ--EGLSVSMDLA 205 (360)
Q Consensus 170 ~~~~v~~~~-~~--~~~~~~~~~~~~a~~--~~~~v~~d~~ 205 (360)
+.++|++.. .. ....-+.++.+.|++ +|+.+++|-.
T Consensus 167 ~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a 207 (415)
T 2fq6_A 167 NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNT 207 (415)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECT
T ss_pred CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECC
Confidence 346777661 11 011125788888999 9999999985
No 91
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=31.97 E-value=2.5e+02 Score=24.35 Aligned_cols=36 Identities=19% Similarity=0.173 Sum_probs=27.3
Q ss_pred CCcEEEEe------ecccCHHHHHHHHHHHHHCCCeEEEeCC
Q 018120 170 GSKWLVLR------FGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (360)
Q Consensus 170 ~~~~v~~~------~~~~~~~~~~~~~~~a~~~~~~v~~d~~ 205 (360)
+.+++++. +...+.+.+.++++.|+++|+.+++|-.
T Consensus 150 ~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~ 191 (377)
T 3fdb_A 150 GARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEI 191 (377)
T ss_dssp TCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 35566665 1224567899999999999999999975
No 92
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=31.83 E-value=2.7e+02 Score=24.59 Aligned_cols=97 Identities=13% Similarity=0.095 Sum_probs=56.4
Q ss_pred ceEecCchHHHHHHHHHhhcCCc-eEEE------------------EeecCChhHHHHHHHHHhCCCeeceeeecCCCCe
Q 018120 74 IKTIAGGSVTNTIRGLSVGFGVP-CGLI------------------GAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTG 134 (360)
Q Consensus 74 ~~~~~GG~a~N~a~~la~~lG~~-v~~i------------------g~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~t~ 134 (360)
.-.-.||.+..++.+|++ .|.. .+++ ..+|. .-.+.+.+.|++.+-++..
T Consensus 40 livG~GGlG~~ia~~La~-~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~-~Ka~~~~~~l~~lnp~v~v--------- 108 (346)
T 1y8q_A 40 LLVGLKGLGAEIAKNLIL-AGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGR-NRAEASLERAQNLNPMVDV--------- 108 (346)
T ss_dssp EEECCSHHHHHHHHHHHH-HTCSEEEEECCCBCCSSCGGGCTTSCSSCTTS-BHHHHHHHHHHHTCTTSEE---------
T ss_pred EEECCCHHHHHHHHHHHH-cCCCEEEEEECCCcchhhCCCCCccccccCcC-CHHHHHHHHHHhHCCCeEE---------
Confidence 445689999999999998 8974 4444 11222 1344455555554322211
Q ss_pred eEEEEEcCCCceeeecccccccCCCcccCCccccCCCcEEEEeecccCHHHHHHHHHHHHHCCCeEEE
Q 018120 135 QCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSM 202 (360)
Q Consensus 135 ~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~ 202 (360)
..+.. . ++ ....+.++++|+|+.. ..+.+....+-+.+++.+++++.
T Consensus 109 ---~~~~~--~------------~~--~~~~~~~~~~dvVv~~--~d~~~~r~~ln~~~~~~~ip~i~ 155 (346)
T 1y8q_A 109 ---KVDTE--D------------IE--KKPESFFTQFDAVCLT--CCSRDVIVKVDQICHKNSIKFFT 155 (346)
T ss_dssp ---EEECS--C------------GG--GCCHHHHTTCSEEEEE--SCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ---EEEec--c------------cC--cchHHHhcCCCEEEEc--CCCHHHHHHHHHHHHHcCCCEEE
Confidence 01110 0 00 0123456788998876 23567777788889988887663
No 93
>1ztd_A Hypothetical protein PFU-631545-001; structural genomics, southeast collaboratory for structural genomics, secsg; 2.00A {Pyrococcus furiosus} SCOP: a.149.1.2
Probab=29.89 E-value=60 Score=23.48 Aligned_cols=42 Identities=14% Similarity=0.105 Sum_probs=32.1
Q ss_pred ccCCCCccHHhHHHHHHHHHcC-CCHHHHHHHHHHHhcchhcc
Q 018120 290 AIDATGAGDLFASGFLYGLVKG-LSLEECCKVGSCSGGSVIRS 331 (360)
Q Consensus 290 vvdttGAGD~f~ag~~~~l~~~-~~l~~a~~~a~~aaa~~v~~ 331 (360)
-.|..|-||..-|-+.|+|+.| .+.+||++.=...=+.-|.+
T Consensus 63 R~DKh~kGd~aEA~iAyAWleG~is~eEaveilk~nl~~dv~h 105 (133)
T 1ztd_A 63 RVDKHAKGDYAEALIAKAWLMGLISEREAVEIIKKNLYPEVLD 105 (133)
T ss_dssp GGGTTCHHHHHHHHHHHHHHTTSSCHHHHHHHHHTTCCGGGGC
T ss_pred cccccCccHHHHHHHHHHHHhccccHHHHHHHHHhcCcHhhcc
Confidence 3578899999999999999998 68999988654444444433
No 94
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=28.22 E-value=2.1e+02 Score=25.77 Aligned_cols=92 Identities=14% Similarity=0.185 Sum_probs=52.3
Q ss_pred CceEEEEeecCChhHHHHHH-HHHhCCC---eeceeeecCCCCeeEEEEEcCCCceeeecccccccCCCcccC-CccccC
Q 018120 95 VPCGLIGAYGDDQQGQLFVS-NMQFSGV---DVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADEL-IAEDVK 169 (360)
Q Consensus 95 ~~v~~ig~vG~D~~g~~i~~-~l~~~gv---~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~-~~~~~~ 169 (360)
.+|.++|.-|- .|..+.+ .|.++.. ...++.. .. .|++.. ...+. .+..++. +.+.+.
T Consensus 5 ~~VaIvGATG~--vG~ellr~lL~~hp~~~~~l~~~ss--~~----------aG~~~~-~~~~~--~~~v~~~~~~~~~~ 67 (377)
T 3uw3_A 5 MNVGLVGWRGM--VGSVLMQRMQEEGDFDLIEPVFFST--SN----------AGGKAP-SFAKN--ETTLKDATSIDDLK 67 (377)
T ss_dssp CEEEEESTTSH--HHHHHHHHHHHTTGGGGSEEEEEES--SC----------TTSBCC-TTCCS--CCBCEETTCHHHHH
T ss_pred CEEEEECCCCH--HHHHHHHHHHhhCCCCceEEEEEec--hh----------cCCCHH-HcCCC--ceEEEeCCChhHhc
Confidence 45555555554 6888888 9998873 3222211 11 122111 01111 1222233 234467
Q ss_pred CCcEEEEeecccCHHHHHHHHHHHHHCCC-eEEEeCCC
Q 018120 170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGL-SVSMDLAS 206 (360)
Q Consensus 170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~~~-~v~~d~~~ 206 (360)
++|+++++ .+.....++...+.+.|+ .+++|.++
T Consensus 68 ~vDvvf~a---~~~~~s~~~~~~~~~~G~k~~VID~ss 102 (377)
T 3uw3_A 68 KCDVIITC---QGGDYTNDVFPKLRAAGWNGYWIDAAS 102 (377)
T ss_dssp TCSEEEEC---SCHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCCEEEEC---CChHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 89999887 346677777777778887 58999986
No 95
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=26.80 E-value=1.2e+02 Score=27.57 Aligned_cols=36 Identities=17% Similarity=0.148 Sum_probs=24.1
Q ss_pred CCcEEEEeec-c--cCHHHHHHHHHHHHHCCCeEEEeCC
Q 018120 170 GSKWLVLRFG-M--FNFEVIQAAIRIAKQEGLSVSMDLA 205 (360)
Q Consensus 170 ~~~~v~~~~~-~--~~~~~~~~~~~~a~~~~~~v~~d~~ 205 (360)
+.++|++... . ....-+.++.+.|+++|+.+++|-.
T Consensus 166 ~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~ 204 (414)
T 3ndn_A 166 PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNV 204 (414)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECT
T ss_pred CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECC
Confidence 4567777611 0 0112366788889999999999985
No 96
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=26.32 E-value=2.8e+02 Score=25.02 Aligned_cols=37 Identities=11% Similarity=0.060 Sum_probs=27.9
Q ss_pred ccCCCcEEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCCh
Q 018120 167 DVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASF 207 (360)
Q Consensus 167 ~~~~~~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~ 207 (360)
.+.++|+++++ ++.....++...+.+.|++ ++|.++.
T Consensus 90 ~~~~~Dvvf~a---lp~~~s~~~~~~~~~~G~~-VIDlSa~ 126 (381)
T 3hsk_A 90 NFLECDVVFSG---LDADVAGDIEKSFVEAGLA-VVSNAKN 126 (381)
T ss_dssp TGGGCSEEEEC---CCHHHHHHHHHHHHHTTCE-EEECCST
T ss_pred hcccCCEEEEC---CChhHHHHHHHHHHhCCCE-EEEcCCc
Confidence 56789999887 3567777788877788865 6788864
No 97
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=26.20 E-value=2.1e+02 Score=21.43 Aligned_cols=107 Identities=9% Similarity=0.066 Sum_probs=54.4
Q ss_pred ceEEEEeecC-ChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCC--CceeeecccccccCCCcccCCccccCCCc
Q 018120 96 PCGLIGAYGD-DQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDAS--GNRTMRPCLSNAVKIQADELIAEDVKGSK 172 (360)
Q Consensus 96 ~v~~ig~vG~-D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~--g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (360)
++.++|.-.+ ...|..+.+.|.+.|.+.-. +++. ++. + .+....-+.+++. ...|
T Consensus 15 ~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~--------------vnp~~~~~~-i---~G~~~~~sl~el~----~~vD 72 (140)
T 1iuk_A 15 TIAVLGAHKDPSRPAHYVPRYLREQGYRVLP--------------VNPRFQGEE-L---FGEEAVASLLDLK----EPVD 72 (140)
T ss_dssp EEEEETCCSSTTSHHHHHHHHHHHTTCEEEE--------------ECGGGTTSE-E---TTEECBSSGGGCC----SCCS
T ss_pred EEEEECCCCCCCChHHHHHHHHHHCCCEEEE--------------eCCCcccCc-C---CCEEecCCHHHCC----CCCC
Confidence 3444443222 35789999999998875211 2222 221 1 0111111122222 2467
Q ss_pred EEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcC
Q 018120 173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFAN 232 (360)
Q Consensus 173 ~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n 232 (360)
++++. ++++...++++.+.+.|++.++-..+. +.+.+.+........++-+|
T Consensus 73 lavi~---vp~~~~~~v~~~~~~~gi~~i~~~~g~-----~~~~~~~~a~~~Gir~vgpn 124 (140)
T 1iuk_A 73 ILDVF---RPPSALMDHLPEVLALRPGLVWLQSGI-----RHPEFEKALKEAGIPVVADR 124 (140)
T ss_dssp EEEEC---SCHHHHTTTHHHHHHHCCSCEEECTTC-----CCHHHHHHHHHTTCCEEESC
T ss_pred EEEEE---eCHHHHHHHHHHHHHcCCCEEEEcCCc-----CHHHHHHHHHHcCCEEEcCC
Confidence 77774 467777777877777776544433321 12444444433356777666
No 98
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=25.98 E-value=1.1e+02 Score=27.33 Aligned_cols=20 Identities=15% Similarity=0.214 Sum_probs=17.7
Q ss_pred HHHHHHHHHHCCCeEEEeCC
Q 018120 186 IQAAIRIAKQEGLSVSMDLA 205 (360)
Q Consensus 186 ~~~~~~~a~~~~~~v~~d~~ 205 (360)
+.++.+.|+++|+.+++|-.
T Consensus 170 l~~i~~la~~~g~~li~D~~ 189 (392)
T 3qhx_A 170 IAGIAQLGADSSAKVLVDNT 189 (392)
T ss_dssp HHHHHHHHHHHTCEEEEECT
T ss_pred HHHHHHHHHHcCCEEEEECC
Confidence 77888889999999999985
No 99
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=24.62 E-value=2.2e+02 Score=21.30 Aligned_cols=108 Identities=11% Similarity=0.080 Sum_probs=56.6
Q ss_pred CceEEEEeecC-ChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeecccccccCCCcccCCccccCCCcE
Q 018120 95 VPCGLIGAYGD-DQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKW 173 (360)
Q Consensus 95 ~~v~~ig~vG~-D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (360)
.++.++|.=.+ ...|..+.+.|.+.|.++- -+++.++ .+ .+....-+.+++. ...|+
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~--------------~Vnp~~~-~i---~G~~~y~sl~~l~----~~vDl 80 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHGYDVY--------------PVNPKYE-EV---LGRKCYPSVLDIP----DKIEV 80 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEE--------------EECTTCS-EE---TTEECBSSGGGCS----SCCSE
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCCCEEE--------------EECCCCC-eE---CCeeccCCHHHcC----CCCCE
Confidence 34555543322 3578899999999887521 1222221 11 1111111223332 24688
Q ss_pred EEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcC
Q 018120 174 LVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFAN 232 (360)
Q Consensus 174 v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n 232 (360)
+++. ++++...++++.+.+.|++.++-..+. ..+.+.+......+.++-+|
T Consensus 81 vvi~---vp~~~~~~vv~~~~~~gi~~i~~~~g~-----~~~~l~~~a~~~Gi~vvGpn 131 (144)
T 2d59_A 81 VDLF---VKPKLTMEYVEQAIKKGAKVVWFQYNT-----YNREASKKADEAGLIIVANR 131 (144)
T ss_dssp EEEC---SCHHHHHHHHHHHHHHTCSEEEECTTC-----CCHHHHHHHHHTTCEEEESC
T ss_pred EEEE---eCHHHHHHHHHHHHHcCCCEEEECCCc-----hHHHHHHHHHHcCCEEEcCC
Confidence 8875 467888888888888777655433221 12444444442355666666
No 100
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=24.51 E-value=65 Score=28.74 Aligned_cols=33 Identities=27% Similarity=0.337 Sum_probs=20.7
Q ss_pred ceEecCchHHHH-HHHHHhhcCCceEEEEeecCCh
Q 018120 74 IKTIAGGSVTNT-IRGLSVGFGVPCGLIGAYGDDQ 107 (360)
Q Consensus 74 ~~~~~GG~a~N~-a~~la~~lG~~v~~ig~vG~D~ 107 (360)
+....||.+.+. +..|++ +..+.+.|-.++||-
T Consensus 13 IVvigGGtGl~~ll~gLk~-~~~~iTaIVtvaDDG 46 (341)
T 2p0y_A 13 IVVIGGGTGLPVVLNGLRK-QAVDITAVVTVADDG 46 (341)
T ss_dssp EEEECCGGGHHHHHHHHHH-SSSEEEEECC-----
T ss_pred EEEECCcccHHHHHHHHHh-CCCCeEEEEECCcCC
Confidence 556678888764 446776 788888888888873
No 101
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=24.50 E-value=2.9e+02 Score=23.34 Aligned_cols=75 Identities=11% Similarity=0.093 Sum_probs=46.1
Q ss_pred ceEEEEeecC--ChhHHHHHHHHHhCCCeeceeeecCCCCeeEEEEEcCCCceeeecccccccCCCcccCCccccCCCcE
Q 018120 96 PCGLIGAYGD--DQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKW 173 (360)
Q Consensus 96 ~v~~ig~vG~--D~~g~~i~~~l~~~gv~~~~i~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (360)
++.+++ |. ......+.+.|++.|+++..+...+-+ .+...+.++|+
T Consensus 6 ~vLiV~--g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~------------------------------~~~~~L~~yDv 53 (259)
T 3rht_A 6 RVLYCG--DTSLETAAGYLAGLMTSWQWEFDYIPSHVGL------------------------------DVGELLAKQDL 53 (259)
T ss_dssp CEEEEE--SSCTTTTHHHHHHHHHHTTCCCEEECTTSCB------------------------------CSSHHHHTCSE
T ss_pred eEEEEC--CCCchhHHHHHHHHHHhCCceEEEecccccc------------------------------cChhHHhcCCE
Confidence 455553 33 346788999999999887754321100 02245678899
Q ss_pred EEEe-ec--ccCHHHHHHHHHHHHHCCCeEEE
Q 018120 174 LVLR-FG--MFNFEVIQAAIRIAKQEGLSVSM 202 (360)
Q Consensus 174 v~~~-~~--~~~~~~~~~~~~~a~~~~~~v~~ 202 (360)
|++. .. .++++.+..+.+..++-|..+++
T Consensus 54 IIl~d~~~~~l~~~~~~~L~~yV~~GGgLi~~ 85 (259)
T 3rht_A 54 VILSDYPAERMTAQAIDQLVTMVKAGCGLVML 85 (259)
T ss_dssp EEEESCCGGGBCHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEcCCccccCCHHHHHHHHHHHHhCCeEEEe
Confidence 9988 22 35677777777777754444444
No 102
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=23.80 E-value=3.9e+02 Score=23.81 Aligned_cols=38 Identities=16% Similarity=0.067 Sum_probs=28.7
Q ss_pred ccCCCcEEEEeecccCHHHHHHHHHHHHHCCC-eEEEeCCCh
Q 018120 167 DVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGL-SVSMDLASF 207 (360)
Q Consensus 167 ~~~~~~~v~~~~~~~~~~~~~~~~~~a~~~~~-~v~~d~~~~ 207 (360)
.+.++|+++++ .+.....+....+.+.|+ .+++|.++.
T Consensus 62 ~~~~~DvVf~a---~g~~~s~~~a~~~~~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 62 ALKALDIIVTC---QGGDYTNEIYPKLRESGWQGYWIDAASS 100 (367)
T ss_dssp HHHTCSEEEEC---SCHHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred HhcCCCEEEEC---CCchhHHHHHHHHHHCCCCEEEEcCChh
Confidence 35688999887 245677778888888887 489999763
No 103
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=22.72 E-value=1.7e+02 Score=24.97 Aligned_cols=60 Identities=17% Similarity=0.241 Sum_probs=37.4
Q ss_pred CCCcEEEEeecccCHHHHHHHHHHHHHCCCeEEEeCCChhHHHhhhHHHHHhhccCCccEEEcCH
Q 018120 169 KGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASFEMVRNFRTPLLQLLESGDVDLCFANE 233 (360)
Q Consensus 169 ~~~~~v~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~ 233 (360)
..+++++++ ...+.+.++++.....-..+..|+++....+.+.+...+-+. .+|+|+-|.
T Consensus 52 ~Ga~V~i~~---r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G--~iDiLVNNA 111 (273)
T 4fgs_A 52 EGARVFITG---RRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAG--RIDVLFVNA 111 (273)
T ss_dssp TTCEEEEEE---SCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS--CEEEEEECC
T ss_pred CCCEEEEEE---CCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcC--CCCEEEECC
Confidence 455665554 245566666555544445567888887665555555555565 789998774
No 104
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=22.68 E-value=68 Score=28.38 Aligned_cols=24 Identities=13% Similarity=-0.079 Sum_probs=18.3
Q ss_pred cCchHHHHHHHHHhhcCCceEEEEe
Q 018120 78 AGGSVTNTIRGLSVGFGVPCGLIGA 102 (360)
Q Consensus 78 ~GG~a~N~a~~la~~lG~~v~~ig~ 102 (360)
.|-.++.+|..|++ .|.+|.++-.
T Consensus 25 gG~~Gl~~A~~La~-~G~~V~llE~ 48 (382)
T 1ryi_A 25 GGIIGSAIAYYLAK-ENKNTALFES 48 (382)
T ss_dssp CSHHHHHHHHHHHH-TTCCEEEECS
T ss_pred cCHHHHHHHHHHHh-CCCcEEEEeC
Confidence 34466778888888 8999998853
No 105
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=22.36 E-value=3e+02 Score=23.02 Aligned_cols=60 Identities=13% Similarity=0.178 Sum_probs=39.3
Q ss_pred CCCcEEEEeecccCHHHHHHHHHHHHHCCCe---EEEeCCChhHHHhhhHHHHHhhccCCccEEEcCH
Q 018120 169 KGSKWLVLRFGMFNFEVIQAAIRIAKQEGLS---VSMDLASFEMVRNFRTPLLQLLESGDVDLCFANE 233 (360)
Q Consensus 169 ~~~~~v~~~~~~~~~~~~~~~~~~a~~~~~~---v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n~ 233 (360)
..+++++++ ...+...++.+..++.|.. +.+|+++....+.+-+...+-+. .+|+++-|.
T Consensus 30 ~Ga~Vv~~~---~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G--~iDiLVNNA 92 (254)
T 4fn4_A 30 NDSIVVAVE---LLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS--RIDVLCNNA 92 (254)
T ss_dssp TTCEEEEEE---SCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS--CCCEEEECC
T ss_pred cCCEEEEEE---CCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC--CCCEEEECC
Confidence 456666654 2466777777777776654 45688877665555555555565 789888764
No 106
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=21.55 E-value=1.3e+02 Score=25.50 Aligned_cols=47 Identities=15% Similarity=0.076 Sum_probs=30.8
Q ss_pred cCchHHHHHHHHHhhcCCceEEEEee---------------cC-----ChhHHHHHHHHHhCCCeece
Q 018120 78 AGGSVTNTIRGLSVGFGVPCGLIGAY---------------GD-----DQQGQLFVSNMQFSGVDVSR 125 (360)
Q Consensus 78 ~GG~a~N~a~~la~~lG~~v~~ig~v---------------G~-----D~~g~~i~~~l~~~gv~~~~ 125 (360)
.|-.+..+|..|++ .|.++.++-.- +. ..+-+.+.+.+++.|++...
T Consensus 23 ~G~aGl~aA~~l~~-~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 89 (323)
T 3f8d_A 23 LGPAAYGAALYSAR-YMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL 89 (323)
T ss_dssp CSHHHHHHHHHHHH-TTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE
T ss_pred ccHHHHHHHHHHHH-CCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE
Confidence 34456678888888 89999988641 11 12445556677778887654
No 107
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=21.05 E-value=1.3e+02 Score=27.49 Aligned_cols=36 Identities=17% Similarity=0.354 Sum_probs=23.4
Q ss_pred CCcEEEEe-ecc--cCHHHHHHHHHHHHHCCCeEEEeCC
Q 018120 170 GSKWLVLR-FGM--FNFEVIQAAIRIAKQEGLSVSMDLA 205 (360)
Q Consensus 170 ~~~~v~~~-~~~--~~~~~~~~~~~~a~~~~~~v~~d~~ 205 (360)
+.++|++. ... ....-+.++.+.|+++|+.+++|-.
T Consensus 167 ~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a 205 (430)
T 3ri6_A 167 TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTT 205 (430)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECT
T ss_pred CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECC
Confidence 45677766 111 0111256788889999999999975
No 108
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=20.96 E-value=2.7e+02 Score=20.88 Aligned_cols=54 Identities=11% Similarity=0.045 Sum_probs=30.4
Q ss_pred CCcEEEEeecccCHHHHHHHHHHHHHCCCe-EEEeCCChhHHHhhhHHHHHhhccCCccEEEcC
Q 018120 170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGLS-VSMDLASFEMVRNFRTPLLQLLESGDVDLCFAN 232 (360)
Q Consensus 170 ~~~~v~~~~~~~~~~~~~~~~~~a~~~~~~-v~~d~~~~~~~~~~~~~l~~~l~~~~~dil~~n 232 (360)
..|++++. ++++...++++.+.+.|++ ++++++.. .+.+.+......+.++-+|
T Consensus 70 ~~Dlvii~---vp~~~v~~v~~~~~~~g~~~i~i~~~~~------~~~l~~~a~~~Gi~~igpn 124 (145)
T 2duw_A 70 KVDMVDVF---RNSEAAWGVAQEAIAIGAKTLWLQLGVI------NEQAAVLAREAGLSVVMDR 124 (145)
T ss_dssp CCSEEECC---SCSTHHHHHHHHHHHHTCCEEECCTTCC------CHHHHHHHHTTTCEEECSC
T ss_pred CCCEEEEE---eCHHHHHHHHHHHHHcCCCEEEEcCChH------HHHHHHHHHHcCCEEEcCC
Confidence 56888775 3445666666656556643 56666432 3445554443355666566
No 109
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=20.33 E-value=1e+02 Score=24.17 Aligned_cols=36 Identities=11% Similarity=0.178 Sum_probs=0.0
Q ss_pred CceEEEEeecC-------------ChhHHHHHHHHHhCCCeeceeeecCC
Q 018120 95 VPCGLIGAYGD-------------DQQGQLFVSNMQFSGVDVSRLRMKRG 131 (360)
Q Consensus 95 ~~v~~ig~vG~-------------D~~g~~i~~~l~~~gv~~~~i~~~~~ 131 (360)
.++.++ .+|+ |..|.+|.+.|++.|+++......+.
T Consensus 16 ~~v~ii-tvsd~~~~~~~~~g~i~D~ng~~L~~~L~~~G~~v~~~~iV~D 64 (178)
T 3iwt_A 16 LNFYVI-TISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPD 64 (178)
T ss_dssp CEEEEE-EECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECS
T ss_pred CEEEEE-EEcCCCccccccCCCCCcchHHHHHHHHHHCCCEEEEEEEeCC
Done!