Query 018126
Match_columns 360
No_of_seqs 168 out of 748
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 10:21:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018126.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018126hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yqc_A UDP-N-acetylglucosamine 100.0 2.7E-79 9.2E-84 625.5 33.6 334 22-359 3-342 (486)
2 1jv1_A Glcnac1P uridyltransfer 100.0 2.2E-75 7.6E-80 598.8 34.9 328 23-359 1-334 (505)
3 3ogz_A UDP-sugar pyrophosphory 100.0 1E-75 3.5E-80 606.1 25.1 316 23-359 7-365 (630)
4 3oc9_A UDP-N-acetylglucosamine 100.0 2.9E-72 9.8E-77 559.5 24.2 247 105-359 21-267 (405)
5 3r3i_A UTP--glucose-1-phosphat 100.0 4.9E-73 1.7E-77 577.7 18.9 291 37-359 53-355 (528)
6 3gue_A UTP-glucose-1-phosphate 100.0 3.1E-69 1.1E-73 546.1 22.0 271 65-359 30-312 (484)
7 2oeg_A UTP-glucose-1-phosphate 100.0 2.6E-59 9E-64 478.4 20.3 279 53-359 18-313 (505)
8 2icy_A Probable UTP-glucose-1- 100.0 1.5E-56 5.1E-61 455.5 22.4 274 60-359 22-300 (469)
9 2i5k_A UTP--glucose-1-phosphat 100.0 4.4E-54 1.5E-58 439.5 20.5 285 40-359 20-313 (488)
10 3st8_A Bifunctional protein GL 99.2 1.2E-10 4.3E-15 118.4 12.7 169 118-337 11-182 (501)
11 4ecm_A Glucose-1-phosphate thy 98.8 2.3E-07 7.7E-12 86.6 18.0 156 118-330 23-181 (269)
12 3oam_A 3-deoxy-manno-octuloson 98.7 1.7E-07 5.7E-12 87.0 13.0 179 119-359 2-188 (252)
13 1fxo_A Glucose-1-phosphate thy 98.7 5.3E-07 1.8E-11 85.7 16.6 151 119-322 2-155 (293)
14 1lvw_A Glucose-1-phosphate thy 98.6 1.5E-06 5E-11 82.9 16.7 150 120-322 4-156 (295)
15 1mc3_A Glucose-1-phosphate thy 98.6 1.3E-06 4.4E-11 83.3 15.8 156 120-330 4-162 (296)
16 3juk_A UDP-glucose pyrophospho 98.5 9.7E-07 3.3E-11 82.5 14.1 173 120-332 3-192 (281)
17 3pnn_A Conserved domain protei 98.5 1.4E-06 4.8E-11 83.1 14.4 174 119-331 5-188 (303)
18 3brk_X Glucose-1-phosphate ade 98.5 2.5E-06 8.4E-11 84.5 16.5 168 119-330 12-187 (420)
19 2qh5_A PMI, ALGA, mannose-6-ph 98.5 9.9E-07 3.4E-11 84.1 12.2 146 119-316 4-157 (308)
20 1yp2_A Glucose-1-phosphate ade 98.4 2.4E-06 8.4E-11 85.1 14.9 176 119-333 20-200 (451)
21 4evw_A Nucleoside-diphosphate- 98.3 6.4E-07 2.2E-11 83.4 7.1 154 122-330 2-162 (255)
22 1tzf_A Glucose-1-phosphate cyt 98.3 7.8E-06 2.7E-10 74.9 13.7 169 120-330 3-178 (259)
23 3k8d_A 3-deoxy-manno-octuloson 98.2 6E-06 2E-10 77.6 11.1 152 119-332 18-175 (264)
24 2v0h_A Bifunctional protein GL 98.2 8.7E-06 3E-10 80.7 12.8 142 118-322 4-148 (456)
25 1hm9_A GLMU, UDP-N-acetylgluco 98.2 1.6E-05 5.4E-10 79.3 14.2 151 120-330 12-163 (468)
26 3tqd_A 3-deoxy-manno-octuloson 98.2 8.3E-06 2.8E-10 76.3 11.2 179 119-359 9-197 (256)
27 4fce_A Bifunctional protein GL 98.2 1.7E-05 5.7E-10 78.7 14.1 142 118-322 7-151 (459)
28 2y6p_A 3-deoxy-manno-octuloson 98.2 1.2E-05 3.9E-10 72.6 11.0 113 119-294 2-115 (234)
29 2e3d_A UTP--glucose-1-phosphat 98.2 2.8E-05 9.5E-10 73.4 14.0 143 119-316 8-183 (302)
30 1ezi_A CMP-N-acetylneuraminic 98.1 3.9E-05 1.4E-09 69.1 13.7 131 119-306 4-138 (228)
31 2ux8_A Glucose-1-phosphate uri 98.1 1.9E-05 6.6E-10 74.4 11.9 65 118-202 13-80 (297)
32 3f1c_A Putative 2-C-methyl-D-e 98.1 4.6E-05 1.6E-09 70.0 13.8 66 119-202 3-69 (246)
33 2pa4_A UTP-glucose-1-phosphate 98.1 1.3E-05 4.5E-10 76.7 10.2 63 120-202 13-78 (323)
34 1h7e_A 3-deoxy-manno-octuloson 98.1 1.8E-05 6.2E-10 71.9 10.7 126 119-304 2-129 (245)
35 1qwj_A Cytidine monophospho-N- 98.0 4.4E-05 1.5E-09 69.2 12.2 129 119-303 3-133 (229)
36 2waw_A MOBA relate protein; un 98.0 5.6E-05 1.9E-09 66.0 12.2 103 119-278 5-108 (199)
37 2x65_A Mannose-1-phosphate gua 98.0 4.4E-05 1.5E-09 73.9 11.6 160 120-333 2-173 (336)
38 2xwl_A 2-C-methyl-D-erythritol 98.0 0.0001 3.6E-09 65.7 13.3 41 119-162 2-42 (223)
39 3q80_A 2-C-methyl-D-erythritol 97.9 0.00023 7.7E-09 65.4 14.7 131 118-305 6-139 (231)
40 1vic_A 3-deoxy-manno-octuloson 97.9 0.00018 6E-09 66.4 13.9 130 119-306 2-132 (262)
41 1vpa_A 2-C-methyl-D-erythritol 97.9 4.7E-05 1.6E-09 68.6 9.5 40 119-161 13-52 (234)
42 1vgw_A 4-diphosphocytidyl-2C-m 97.9 5.8E-05 2E-09 67.8 10.1 41 118-161 5-45 (231)
43 2vsh_A TARI, 2-C-methyl-D-eryt 97.9 8.2E-05 2.8E-09 66.8 10.7 65 120-202 3-68 (236)
44 1i52_A 4-diphosphocytidyl-2-C- 97.8 6.4E-05 2.2E-09 68.1 9.7 40 119-161 7-46 (236)
45 2wee_A MOBA-related protein; u 97.8 7.7E-05 2.6E-09 65.1 9.5 62 119-202 5-66 (197)
46 2cu2_A Putative mannose-1-phos 97.7 0.00022 7.7E-09 68.9 12.0 179 119-359 2-193 (337)
47 2yc3_A 2-C-methyl-D-erythritol 97.6 7.2E-05 2.5E-09 67.2 6.2 40 119-161 4-43 (228)
48 4fcu_A 3-deoxy-manno-octuloson 97.6 0.00046 1.6E-08 64.2 11.7 145 120-330 2-158 (253)
49 3ngw_A Molybdopterin-guanine d 97.6 0.00092 3.2E-08 60.2 13.0 37 120-161 1-37 (208)
50 2ggo_A 401AA long hypothetical 97.5 0.0009 3.1E-08 65.1 13.0 132 121-317 2-136 (401)
51 3rsb_A Adenosylcobinamide-phos 97.5 0.00012 4E-09 64.3 5.4 61 121-202 2-62 (196)
52 1w55_A ISPD/ISPF bifunctional 97.2 0.0012 3.9E-08 65.1 10.2 40 119-161 3-42 (371)
53 1jyk_A LICC protein, CTP:phosp 97.2 0.00019 6.5E-09 66.3 4.1 41 119-162 25-68 (254)
54 2px7_A 2-C-methyl-D-erythritol 97.2 0.00017 5.7E-09 65.8 3.4 37 119-159 25-61 (236)
55 3d5n_A Q97W15_sulso; NESG, SSR 97.2 0.0002 6.8E-09 63.5 3.8 38 119-161 2-39 (197)
56 1e5k_A Molybdopterin-guanine d 97.2 0.00025 8.7E-09 63.1 4.4 39 119-161 6-44 (201)
57 2xme_A CTP-inositol-1-phosphat 97.2 0.00039 1.3E-08 62.7 5.6 39 119-161 18-56 (232)
58 2e8b_A Probable molybdopterin- 96.7 0.00024 8.3E-09 63.1 -0.3 38 119-161 14-51 (201)
59 2dpw_A Hypothetical protein TT 95.9 0.0048 1.6E-07 55.8 3.8 39 119-161 2-43 (232)
60 3h8q_A Thioredoxin reductase 3 27.8 1.1E+02 0.0037 23.5 5.7 50 192-265 54-103 (114)
61 4b4t_J 26S protease regulatory 21.2 2.2E+02 0.0075 27.8 7.5 128 131-302 175-317 (405)
No 1
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=100.00 E-value=2.7e-79 Score=625.50 Aligned_cols=334 Identities=38% Similarity=0.675 Sum_probs=308.3
Q ss_pred CCCHHHHHHHHHHCCCchhccccccCCHHHHHHHHHHHhcC-ChHHHHHHHHHHHhcCCC-CC-CCcccCCCCCcccccc
Q 018126 22 SPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESL-DLPRVDRIIRCSLRSQGL-PV-AAIEPVPERSVSTVEE 98 (360)
Q Consensus 22 ~~~~~~l~~~l~~~gQ~Hl~~~~~~l~~~ek~~L~~ql~~i-D~~~~~~~~~~~~~~~~~-~~-~~~~p~p~~~~~~~~~ 98 (360)
++.+.+++++|+++||+|||++|++|+++||++|++||+++ |++.+.++++++...+.. .+ ..++|+|++.+.++.+
T Consensus 3 ~~~~~~l~~~l~~~gQ~hl~~~~~~l~~~ek~~l~~ql~~~~d~~~l~~~~~~~~~~~~~~~~~~~i~p~p~~~~~~~~~ 82 (486)
T 2yqc_A 3 VKSQQQIIDSFKQANQDQLFQYYDSLTIDQQQEFIDQLSTIEEPAKLISTVEQAIQFSQTNSTSRNFTQLPNEQTASTLD 82 (486)
T ss_dssp CCCHHHHHHHHHHTTCGGGGTTGGGSCHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHTC----CCCEECCCGGGEEETTT
T ss_pred hhhHHHHHHHHHHcCcHHHhhhhccCCHHHHHHHHHHHHhCcCHHHHHHHHHHHHhccccccccccccCCChhhcccccc
Confidence 46678999999999999999999999999999999999999 999999999988754322 22 2489999988888877
Q ss_pred CChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 018126 99 RTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSG 178 (360)
Q Consensus 99 ~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~ 178 (360)
.+.++.++|++.|+++|++||+|+|+||||+|||||++.||||+||++|++|||||+++++|+++++++.+.++. ..
T Consensus 83 ~~~~~~~~~~~~G~~~i~~gkvavvlLaGG~GTRLg~~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~---~~ 159 (486)
T 2yqc_A 83 LSKDILQNWTELGLKAIGNGEVAVLLMAGGQGTRLGSSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKS---TK 159 (486)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCEEEEEEEESBCGGGTCSSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTC---SS
T ss_pred CChHHHHHHHHHHHHHHhhCCeEEEEEcCCccccCCCCCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCC---Cc
Confidence 777888899999999999999999999999999999999999999999999999999999999999998665431 13
Q ss_pred CCceeEEEecCCcchHHHHHHHhhcCCCCCCCCcEEEEEcCceeeeecCC-cccccCCCcccccCCCChhHhHHHhhCcH
Q 018126 179 SAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDG-RFIMETPYKVAKAPDGNGGVYSALKSSKL 257 (360)
Q Consensus 179 ~~~ipl~IMTS~~t~~~t~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~g-ki~l~~~~~i~~~P~GhGgi~~aL~~sg~ 257 (360)
.+.||||||||++||+.|++||++|+|||+++++|+||+|+++||++.+| ++++++++.++++|+||||+|.+|.++|+
T Consensus 160 ~~~ip~~ImtS~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~ 239 (486)
T 2yqc_A 160 KPIINWYIMTSGPTRNATESFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGI 239 (486)
T ss_dssp CCCCEEEEEECGGGHHHHHHHHHHTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTH
T ss_pred CCccCEEEEECCCCHHHHHHHHhhccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCc
Confidence 57899999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHCCCeEEEEEcCCCccccccCHHHHHHHHHcCCceEEEEeecCCCCcccceEEEEccCCCeEEEEecCCChHHHh
Q 018126 258 LEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLAS 337 (360)
Q Consensus 258 l~~l~~~Gi~yi~v~~vDN~L~~~~DP~flG~~~~~~~~~~~kvv~K~~p~E~vGvi~~~~~~g~~~vvEYsel~~~~~~ 337 (360)
|++|.++|++|++|+|+||+|++++||.|+|||+.++++++++|++|++|+|++|++|++..||+++||||+|+|+++++
T Consensus 240 Ld~l~~~G~~yi~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~ 319 (486)
T 2yqc_A 240 LDDLNSKGIKHIHMYCVDNCLVKVADPIFIGFAIAKKFDLATKVVRKRDANESVGLIVLDQDNQKPCVIEYSEISQELAN 319 (486)
T ss_dssp HHHHHHHTCCEEEEEETTBTTCCTTCHHHHHHHHHHTCSEEEEEEECCSTTCCCCEEEEETTTTEEEEECGGGSCHHHHH
T ss_pred HHHHHhcCCeEEEEECCCCceeeccCHHHHHHHHHcCCCEEEEEEEcCCCCCceeEEEEEecCCCEEEEEEecCCHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999998733689999999999999988
Q ss_pred hcccCC--Cceeeeccceeeeeec
Q 018126 338 AINQET--GRLRFCWSNVCTFAST 359 (360)
Q Consensus 338 ~~~~~~--g~l~f~~gni~~h~f~ 359 (360)
.+++ + |.+.|+++|||||+|+
T Consensus 320 ~~~~-~~~~~~~~~~~Ni~~~~~~ 342 (486)
T 2yqc_A 320 KKDP-QDSSKLFLRAANIVNHYYS 342 (486)
T ss_dssp CEET-TEEEEESSCEEEEEEEEEE
T ss_pred cccc-cccccccccceeEEEEEEe
Confidence 7654 4 8899999999999997
No 2
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=100.00 E-value=2.2e-75 Score=598.79 Aligned_cols=328 Identities=43% Similarity=0.701 Sum_probs=303.4
Q ss_pred CCHHHHHHHHHHCCCchhccccccCCHHHHHHHHHHHhcCChHHHHHHHHHHHhc-CC-----CCCCCcccCCCCCcccc
Q 018126 23 PPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRS-QG-----LPVAAIEPVPERSVSTV 96 (360)
Q Consensus 23 ~~~~~l~~~l~~~gQ~Hl~~~~~~l~~~ek~~L~~ql~~iD~~~~~~~~~~~~~~-~~-----~~~~~~~p~p~~~~~~~ 96 (360)
|.+.+|+++|.++||+|||+||++|+++||++|++||+++|++.+..+|+++++. .. ...+.++|+|++.+.++
T Consensus 1 ~~~~~l~~~l~~~gQ~hl~~~~~~l~~~ek~~l~~ql~~~d~~~~~~~~~~~~~~~~~s~~~~~~~~~i~p~p~~~~~~~ 80 (505)
T 1jv1_A 1 MNINDLKLTLSKAGQEHLLRFWNELEEAQQVELYAELQAMNFEELNFFFQKAIEGFNQSSHQKNVDARMEPVPREVLGSA 80 (505)
T ss_dssp CCHHHHHHHHHHTTCGGGGTTGGGSCHHHHHHHHHHHHTCCHHHHHHHHHHHHHCC-----------CCBCCCGGGEEET
T ss_pred CCHHHHHHHHHHcCcHHHHhhhhcCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhhhccccCcccccccCCChHhcccc
Confidence 3567899999999999999999999999999999999999999999999988753 11 12356899999888888
Q ss_pred ccCChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCC
Q 018126 97 EERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGG 176 (360)
Q Consensus 97 ~~~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~ 176 (360)
.+ ++++..+|++.|+++|+.||+|+|+||||+|||||++.||+|+||+++++|||||+++++|+++|+++.+.++
T Consensus 81 ~~-~~~~~~~~~~~Gl~~i~~~kvavViLAGG~GTRLg~~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~~G---- 155 (505)
T 1jv1_A 81 TR-DQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYG---- 155 (505)
T ss_dssp TT-TGGGHHHHHHHHHHHHHTTCEEEEEECCCCCCTTSCSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHS----
T ss_pred cC-ChHHHHHHHHHhHHhhccCceEEEEEcCCccccCCCCCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHhcC----
Confidence 76 5667789999999999999999999999999999999999999999999999999999999999999876553
Q ss_pred CCCCceeEEEecCCcchHHHHHHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCc
Q 018126 177 SGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSK 256 (360)
Q Consensus 177 ~~~~~ipl~IMTS~~t~~~t~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg 256 (360)
..+.|||+||||++|++.|++||++|+|||+++++|++|.|+++||++.+|+++|++++.++++|+||||+|.+|.++|
T Consensus 156 -~~~~ip~vImtS~~t~e~t~~~f~~~~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg 234 (505)
T 1jv1_A 156 -NKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQN 234 (505)
T ss_dssp -SCCCCCEEEEECTTTHHHHHHHHHHTGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTT
T ss_pred -CCccceEEEEecCCCHHHHHHHHHhhhhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcC
Confidence 2367999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCeEEEEEcCCCccccccCHHHHHHHHHcCCceEEEEeecCCCCcccceEEEEccCCCeEEEEecCCChHHH
Q 018126 257 LLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLA 336 (360)
Q Consensus 257 ~l~~l~~~Gi~yi~v~~vDN~L~~~~DP~flG~~~~~~~~~~~kvv~K~~p~E~vGvi~~~~~~g~~~vvEYsel~~~~~ 336 (360)
++++|+++|++|++|+|+||+|++++||.|+|||+.++++++++|++|+.++|++|+||+. +|+++||||+|+|++.+
T Consensus 235 ~L~~l~~~g~e~~~V~n~Dn~L~~~~d~~~lg~~~~~~~~~~~~v~~k~~~~e~~Gvl~~~--dg~~~vvEy~E~p~~~~ 312 (505)
T 1jv1_A 235 IVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRV--DGVYQVVEYSEISLATA 312 (505)
T ss_dssp HHHHHHHTTCCEEEEEETTBTTCCTTCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEE--TTEEEEECGGGSCHHHH
T ss_pred cHHHHHhcCCCEEEEEECCccccccchHHHHHHHHHcCCCEEEEEEEccCCccCcceEEEE--CCeEEEEEEeeCCHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999997 79999999999999998
Q ss_pred hhcccCCCceeeeccceeeeeec
Q 018126 337 SAINQETGRLRFCWSNVCTFAST 359 (360)
Q Consensus 337 ~~~~~~~g~l~f~~gni~~h~f~ 359 (360)
+.+++ +|.+.|+++|||||+|+
T Consensus 313 ~~~~~-~g~~~~~~~N~~~~~f~ 334 (505)
T 1jv1_A 313 QKRSS-DGRLLFNAGNIANHFFT 334 (505)
T ss_dssp HCBCT-TSSBSSCEEEEEEEEEE
T ss_pred hhccc-ccccccceeeEEEEEec
Confidence 87764 69999999999999997
No 3
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=100.00 E-value=1e-75 Score=606.10 Aligned_cols=316 Identities=22% Similarity=0.295 Sum_probs=275.6
Q ss_pred CCHHHHHHHHHH--CCCchhcccccc-CC--HHHHHHHHHHHhcCChHH---HHHHHHH---HHhc--CCCCCCCcccCC
Q 018126 23 PPPQALLERLKD--YGQEDAFALWDE-LS--PDERDHLVKDIESLDLPR---VDRIIRC---SLRS--QGLPVAAIEPVP 89 (360)
Q Consensus 23 ~~~~~l~~~l~~--~gQ~Hl~~~~~~-l~--~~ek~~L~~ql~~iD~~~---~~~~~~~---~~~~--~~~~~~~~~p~p 89 (360)
++.++|+++|++ +||+|||+||++ |+ ++||++|++||..+|+++ +..++++ ++.+ ..++.+.++|+|
T Consensus 7 ~~~~~L~~~l~~~~~gQ~HLf~~w~~~l~~~~~e~~~L~~qL~~~d~~~~~gl~~~~~~a~~~l~~~~~~~~~~~~~p~P 86 (630)
T 3ogz_A 7 SNLQALREELCTPGLDQGHLFEGWPETVDECNERQIALLTDLYMFSNMYPGGVAQYIRNGHELLARESEEVDFAALEMPP 86 (630)
T ss_dssp HHHHHHHHHHTSTTTCCGGGGTTCCSSGGGCCHHHHHHHHHHHHGGGTSTTHHHHHHHHHHHHHHHHTSCCCCSEEECCS
T ss_pred hhHHHHHHHhhhccCCchhhhhhcccccCCCHHHHHHHHHHHHhhChhhhhhHHHHHHHHHHHhhccccCCcccccccCC
Confidence 456789999997 999999999999 99 999999999999999765 4444433 3322 234678899777
Q ss_pred CCCccccccCChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHh
Q 018126 90 ERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQ 169 (360)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~ 169 (360)
.......-+..++++.+|++.|+++|+ |+|||+||||||||||+++||+++|++++++|||||+++++|++ +
T Consensus 87 ~~~~~~~l~~~~~~~~~~~~~Gl~~i~--kvavvllaGGlGTRLG~~~pK~~lpv~~~s~ks~lql~~e~i~~---~--- 158 (630)
T 3ogz_A 87 LIFEAPSLHRRTAERTALENAGTAMLC--KTVFVLVAGGLGERLGYSSIKVSLPVETATNTTYLAYYLRWAQR---V--- 158 (630)
T ss_dssp CEEECCCTTCCCHHHHHHHHHHHHHGG--GEEEEEECCCEEGGGTEEEEGGGSBSCTTTCCBHHHHHHHHHHH---H---
T ss_pred CCCccccccCCHHHHHHHHHHhHHHHh--hceEEEecCCcccccCCCCCcccceecCCCCCcHHHHHHHHHHH---H---
Confidence 532222222345678899999999998 99999999999999999999999999999999999999999982 2
Q ss_pred hhcCCCCCCCCceeEEEecCCcchHHHHHHHhhcCCCCCCCCcEEEEEcCceeeee-cCCcccccCCCcccccCCCChhH
Q 018126 170 VTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVS-KDGRFIMETPYKVAKAPDGNGGV 248 (360)
Q Consensus 170 ~~~~~~~~~~~~ipl~IMTS~~t~~~t~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~-~~gki~l~~~~~i~~~P~GhGgi 248 (360)
+++.||||||||+.||+.|++||++ ||+++++|+||+|+++||++ .+|+++|+++++++|+|+||||+
T Consensus 159 --------~g~~iPl~IMTS~~T~~~T~~~~~~---fgl~~~~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv 227 (630)
T 3ogz_A 159 --------GGKEVPFVIMTSDDTHDRTLQLLRE---LQLEVPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDV 227 (630)
T ss_dssp --------HCTTCCEEEEECTTTHHHHHHHHHH---TTCCCTTEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHH
T ss_pred --------hCCCCcEEEEecccchHHHHHHHHH---hCCCcccEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHH
Confidence 2477999999999999999999998 99999999999999999995 78999999999999999999999
Q ss_pred hHHHhhCc------------------HHHHHHHCCCeEEEEEcCCCccccccCHHHHHHHHHcCCceEEEEeecCCCCcc
Q 018126 249 YSALKSSK------------------LLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEK 310 (360)
Q Consensus 249 ~~aL~~sg------------------~l~~l~~~Gi~yi~v~~vDN~L~~~~DP~flG~~~~~~~~~~~kvv~K~~p~E~ 310 (360)
|.+|+++| +|++|+++|++|+||+||||+|++++||.|||||++++++|++||++| .|.|+
T Consensus 228 ~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r-~p~E~ 306 (630)
T 3ogz_A 228 HSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVFIQDTNAGATITIPISLALSAEHSLDMNFTCIPR-VPKEP 306 (630)
T ss_dssp HHHHHHCBC--------------CCBHHHHHHHTTCCEEEEECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECC-CSSCS
T ss_pred HHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEEEEccCCccccccCHHHhHHHHhcCCCEEEEEEEC-CCCcc
Confidence 99999999 999999999999999999999999999999999999999999999998 58999
Q ss_pred cceEEEE-ccCCCe---EEEEecCCChHHHhhcccCCCc-------eeeeccceeeeeec
Q 018126 311 VGVFVRR-GKGGPL---TVVEYSELDPSLASAINQETGR-------LRFCWSNVCTFAST 359 (360)
Q Consensus 311 vGvi~~~-~~~g~~---~vvEYsel~~~~~~~~~~~~g~-------l~f~~gni~~h~f~ 359 (360)
+|++|++ +.||++ ++|||+||++++++.+++ +|+ +.|.+||||||+|+
T Consensus 307 vG~l~~~~~~dGk~~~v~vVEYsei~~~~~~~~~~-~g~~~~~~~~~~~f~GNtNnl~~~ 365 (630)
T 3ogz_A 307 IGLLCRTKKNSGDPWLVANVEYNVFAEVSRALNKD-GGDEVSDPTGFSPFPGSVNTLVFK 365 (630)
T ss_dssp SCEEEEEESSTTSCCEEEEECHHHHHHHHHHC-------------CCCSSCEEEEEEEEE
T ss_pred eeeEEEEecCCCceeeeeEEEeccCCHhHhhccCC-CccccccccccccccccceeeeEE
Confidence 9999996 347898 569999999999987654 566 99999999999996
No 4
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=100.00 E-value=2.9e-72 Score=559.46 Aligned_cols=247 Identities=36% Similarity=0.623 Sum_probs=235.3
Q ss_pred HHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeE
Q 018126 105 ERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHW 184 (360)
Q Consensus 105 ~~~~~~G~~~i~~gkvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl 184 (360)
++|+++|+++|++||||+|+||||+|||||+++||||+||++|++|||||+++++|+++|+++.++..+ .++.|||
T Consensus 21 ~~~~~~Gl~~i~~gkvavvlLAGG~GTRLG~~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~----~~~~Ip~ 96 (405)
T 3oc9_A 21 KEHYYRGLELISQGKTALITPAGGQGSRLGFEHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQ----KNVMIHW 96 (405)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSBCTTTTCCSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCC----SCCCCEE
T ss_pred HHHHHHHHHHHhcCceEEEEecCCCcccccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhccc----cCCCCCE
Confidence 479999999999999999999999999999999999999999999999999999999999998765221 3567999
Q ss_pred EEecCCcchHHHHHHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHC
Q 018126 185 YIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATR 264 (360)
Q Consensus 185 ~IMTS~~t~~~t~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~ 264 (360)
|||||++||+.|++||++|+|||+++++|++|.|+++||+|.+|+++|+++++++|+|+||||+|.+|.++|+|++|.++
T Consensus 97 ~IMtS~~t~e~t~~~f~~~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~ 176 (405)
T 3oc9_A 97 FLMTNEETIEEINNYFKEHQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEK 176 (405)
T ss_dssp EEEECTTTHHHHHHHHHHTGGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHH
T ss_pred EEEeCCccHHHHHHHHHhCcccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEcCCCccccccCHHHHHHHHHcCCceEEEEeecCCCCcccceEEEEccCCCeEEEEecCCChHHHhhcccCCC
Q 018126 265 GIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETG 344 (360)
Q Consensus 265 Gi~yi~v~~vDN~L~~~~DP~flG~~~~~~~~~~~kvv~K~~p~E~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g 344 (360)
|++|++|+|+||+|++++||.|+|||++++++|+++|++|++|+|++|+||++ ||+++||||+|+|++ ++.++ .+|
T Consensus 177 Gieyi~v~nvDN~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~~dek~Gvl~~~--dg~~~vvEysei~~e-~e~~~-~~g 252 (405)
T 3oc9_A 177 GIKYSVAHNVDNILCKDVDPNMIGYMDLLQSEICIKIVKKGFKEEKVGVLVKE--QERIKVVEYTELTDE-LNKQL-SNG 252 (405)
T ss_dssp TCCEEEEECTTBTTCCSSCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEE--TTEEEEECGGGCCTT-TTCBC-TTS
T ss_pred CCEEEEEEeCCCcccccCCHHHHHHHHHcCCCEEEEEEECCCCCCccceEEEE--CCeeEEEEEeeCCHH-HhhcC-CCC
Confidence 99999999999999999999999999999999999999999999999999997 799999999999999 66555 589
Q ss_pred ceeeeccceeeeeec
Q 018126 345 RLRFCWSNVCTFAST 359 (360)
Q Consensus 345 ~l~f~~gni~~h~f~ 359 (360)
.+.||+||||||+|+
T Consensus 253 ~l~fn~~Ni~~h~fs 267 (405)
T 3oc9_A 253 EFIYNCGHISINGYS 267 (405)
T ss_dssp CBSSCEEEEEEEEEE
T ss_pred ceeeccceeEeeecC
Confidence 999999999999997
No 5
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=100.00 E-value=4.9e-73 Score=577.72 Aligned_cols=291 Identities=20% Similarity=0.277 Sum_probs=255.7
Q ss_pred CchhccccccCCHHHHHHHHHHHhcCChHHHHHHHHHHHhcC--CCCCCCcccCCCCCccccccCChHHHHHHHHHhhhh
Q 018126 37 QEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRSQ--GLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKA 114 (360)
Q Consensus 37 Q~Hl~~~~~~l~~~ek~~L~~ql~~iD~~~~~~~~~~~~~~~--~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~G~~~ 114 (360)
|.||+++|+++++++|+.|.+|++.+ ..+|++++... ..+|+.|+|+|++.+.++++++ .|+..+...
T Consensus 53 ~~~l~~~~~~l~~~~~~~~~~el~~f-----~~lf~r~l~~~~~~~~~~~i~p~p~~~~~~~~~l~-----~~~~~~~~~ 122 (528)
T 3r3i_A 53 KKELEKILTTASSHEFEHTKKDLDGF-----RKLFHRFLQEKGPSVDWGKIQRPPEDSIQPYEKIK-----ARGLPDNIS 122 (528)
T ss_dssp TSSSTTTSSSCCTTTTHHHHHHHHHH-----HHHHHHHHHC-------CCCCCCCTTTSEEHHHHT-----TSCCCCSSC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHH-----HHHHHHHHhhccCCCCHHHCcCCCHHHccCHhhcC-----Cccccchhh
Confidence 99999999999999999999998665 88888888654 3578999999999888877643 234444455
Q ss_pred hcCCCEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchH
Q 018126 115 ISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDD 194 (360)
Q Consensus 115 i~~gkvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~ 194 (360)
+..+|||||+||||||||||+++|||++|+ +++|||||+++++|+++++. +++.||||||||+.||+
T Consensus 123 ~~l~kvavvlLaGGlGTRLG~~~PK~~i~V--~sgktflql~~eqI~~l~~~-----------~g~~IPl~IMTS~~T~~ 189 (528)
T 3r3i_A 123 SVLNKLVVVKLNGGLGTSMGCKGPKSLIGV--RNENTFLDLTVQQIEHLNKT-----------YNTDVPLVLMNSFNTDE 189 (528)
T ss_dssp TTCTTEEEEEECCCBCTTTTCSSBGGGSEE--ETTEEHHHHHHHHHHHHHHH-----------HTCCCCEEEEECTTTHH
T ss_pred hhcCceEEEEeCCCCccccCCCCCccceec--CCCCcHHHHHHHHHHHHHHH-----------hCCCCCEEEEeccchhH
Confidence 677899999999999999999999999887 69999999999999999865 35779999999999999
Q ss_pred HHHHHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccC------CCcccccCCCChhHhHHHhhCcHHHHHHHCCCeE
Q 018126 195 ATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMET------PYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKY 268 (360)
Q Consensus 195 ~t~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~------~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~y 268 (360)
+|++||++|+||| .+|++|+|+++||++.+|++++++ +++++|+|+||||+|.+|+++|+|++|+++|++|
T Consensus 190 ~T~~~f~k~~~fg---~~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Giey 266 (528)
T 3r3i_A 190 DTKKILQKYNHCR---VKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEY 266 (528)
T ss_dssp HHHSSCGGGTTSS---CCEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCE
T ss_pred HHHHHHHhcCccC---CCeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEE
Confidence 9999999999999 489999999999999999999976 7899999999999999999999999999999999
Q ss_pred EEEEcCCCccccccCHHHHHHHHHc----CCceEEEEeecCCCCcccceEEEEccCCCeEEEEecCCChHHHhhcccCCC
Q 018126 269 IDCYGVDNALVRVADPTFLGYFIDK----GVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETG 344 (360)
Q Consensus 269 i~v~~vDN~L~~~~DP~flG~~~~~----~~~~~~kvv~K~~p~E~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g 344 (360)
++|+||||++++ +||.|||||+.+ +++|++||++|+.|+|++|++|++ +|+++||||+|+|++.+++ .+|
T Consensus 267 i~v~nvDNlga~-vDp~~Lg~~~~~~~~~~~d~~~kVv~Kt~~dek~Gvl~~~--dGk~~vvEyseip~e~~~~---~~g 340 (528)
T 3r3i_A 267 IFVSNIDNLGAT-VDLYILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQY--EGKLRLVEIAQVPKAHVDE---FKS 340 (528)
T ss_dssp EEEEETTBTTCC-CCHHHHHHHSSCSSSCCCSEEEEECCCCTTCCSSCEEECS--SSSCEEECTTSSCGGGTTT---SSC
T ss_pred EEEEccCCcccc-cCHHHHHHHHhcccccCCcEEEEEeEccccCCcccEEEEE--CCeEEEEEecCCChhHhhc---cCC
Confidence 999999999876 599999999998 999999999999999999999997 7999999999999998875 368
Q ss_pred ceeeeccceeeeeec
Q 018126 345 RLRFCWSNVCTFAST 359 (360)
Q Consensus 345 ~l~f~~gni~~h~f~ 359 (360)
.++|+++|||||+|+
T Consensus 341 ~~~f~~~Ntnnlw~~ 355 (528)
T 3r3i_A 341 VSKFKIFNTNNLWIS 355 (528)
T ss_dssp SSSCCCCEEEEEEEE
T ss_pred cccCCeEEEEEEEEE
Confidence 999999999999997
No 6
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=100.00 E-value=3.1e-69 Score=546.09 Aligned_cols=271 Identities=19% Similarity=0.247 Sum_probs=243.5
Q ss_pred HHHHHHHHHHHhcC--CCCCCCcccCCCCCccccccCChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCCce
Q 018126 65 PRVDRIIRCSLRSQ--GLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCV 142 (360)
Q Consensus 65 ~~~~~~~~~~~~~~--~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLg~~~pKg~~ 142 (360)
..+.++|+++++.. .++|+.|+|+. .+.++++.+.. ..|+++|+ |||||+||||||||||+++|||++
T Consensus 30 ~~f~~~~~~~~~~~~~~i~~~~i~p~~--~~~~~~~l~~~------~~G~~~L~--kvavvlLaGGlGTRLG~~~pKg~~ 99 (484)
T 3gue_A 30 HIFLIQHALVRKGETGYIPEKSISPVE--SLPFLQGIETK------GENTALLR--QAVVLKLNGGLGTGMGLNGPKSLL 99 (484)
T ss_dssp HHHHHHHHHHHTTCCCCCCGGGCEECC--CCCBHHHHCCS------SCCHHHHT--TEEEEEEECCCCGGGTCSSCGGGS
T ss_pred HHHHHHHHHHhcCCCCccCHhhCCChh--ccCChhhcCCc------hHHHHHHh--hcEEEEEcCCcccccCCCCCceee
Confidence 34566677666542 37899999987 35556554322 16999998 999999999999999999999999
Q ss_pred eecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHHHHhhcCCCCCCCCcEEEEEcCcee
Q 018126 143 NIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIP 222 (360)
Q Consensus 143 ~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~~f~~~~~FGl~~~~v~~f~Q~~~P 222 (360)
||+ ++|||||++++||++++++ +++.||||||||+.||++|++||++|+|||+++++|++|.|+++|
T Consensus 100 ~v~--sgksflql~~eqI~~l~~~-----------~~~~iPl~IMTS~~T~~~T~~~~~k~~~Fgl~~~~v~~F~Q~~~P 166 (484)
T 3gue_A 100 QVK--NGQTFLDFTALQLEHFRQV-----------RNCNVPFMLMNSFSTSGETKNFLRKYPTLYEVFDSDIELMQNRVP 166 (484)
T ss_dssp EEE--TTEEHHHHHHHHHHHHHHH-----------HTCCCCEEEEECTTTHHHHHHHGGGCHHHHTTCCCCCEEECCCEE
T ss_pred ecC--CCCcHHHHHHHHHHHHHHH-----------cCCCceEEEECCcchhHHHHHHHHhCcccCCCccceEEEEeCcee
Confidence 998 9999999999999999875 357799999999999999999999999999999999999999999
Q ss_pred eeecCCcc--cccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCCccccccCHHHHHHHHHcCCceEEE
Q 018126 223 CVSKDGRF--IMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAK 300 (360)
Q Consensus 223 ~~~~~gki--~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN~L~~~~DP~flG~~~~~~~~~~~k 300 (360)
|++.+|+. +++++++++|+|+||||+|.+|+++|+|++|+++|++|+||+|||| |++++||.|||||++++++|++|
T Consensus 167 ~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDN-L~a~~Dp~~lG~~~~~~~d~~~k 245 (484)
T 3gue_A 167 KIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDN-LGATLDVRLLDYMHEKQLGFLME 245 (484)
T ss_dssp CEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTC-TTCCCCHHHHHHHHHTTCSEEEE
T ss_pred eEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCC-cccccCHHHHHHHHhcCCCEEEE
Confidence 99999984 4577889999999999999999999999999999999999999999 79999999999999999999999
Q ss_pred EeecCCCCcccceEEEE--------ccCCCeEEEEecCCChHHHhhcccCCCceeeeccceeeeeec
Q 018126 301 VVRKAYPQEKVGVFVRR--------GKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCTFAST 359 (360)
Q Consensus 301 vv~K~~p~E~vGvi~~~--------~~~g~~~vvEYsel~~~~~~~~~~~~g~l~f~~gni~~h~f~ 359 (360)
|++|+.|+|+||+||++ ..+|+++|+||+|+|++.++++.+.+|.+.||++|||+|+++
T Consensus 246 vv~Kt~~dekgG~l~~~~~~~~~~~~~dG~~~vvEyseip~e~~~~f~~~~g~~~FNtnNi~~~l~~ 312 (484)
T 3gue_A 246 VCRRTESDKKGGHLAYKDVIDETTGQTRRRFVLRESAQCPKEDEDSFQNIAKHCFFNTNNIWINLME 312 (484)
T ss_dssp EEECCTTCCSSEEEEEEC--------CCCEEEEEEGGGSCGGGHHHHTCTTTSCEEEEEEEEEEHHH
T ss_pred EEECCCCCCceeEEEEEccccccccCCCCCEEEEEeccCCHHHHhhhcCCCCceEeEeeeEEEEHHH
Confidence 99999999999999997 337999999999999999987665689999999999999874
No 7
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=100.00 E-value=2.6e-59 Score=478.42 Aligned_cols=279 Identities=20% Similarity=0.276 Sum_probs=249.3
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHhcC--CCCCCCcccCCCCCccccccCChHHHHHHHHHhhhhhcCCCEEEEEecCCCc
Q 018126 53 DHLVKDIESLDLPRVDRIIRCSLRSQ--GLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQG 130 (360)
Q Consensus 53 ~~L~~ql~~iD~~~~~~~~~~~~~~~--~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~G 130 (360)
+-..+++...|++.+.++|++++... ..+|+.|+|+ +.+.+++++.. +.|+++|+ |+|+|+||||+|
T Consensus 18 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~i~p~--~~~~~~~~~~~-------~~g~~~l~--k~avViLAGGlG 86 (505)
T 2oeg_A 18 KMRDAKVNEACIRTFIAQHVMVSKGETGSIPDSAIMPV--DSLDALDSLTI-------ECDNAVLQ--STVVLKLNGGLG 86 (505)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHTTCCCCCCGGGCBCC--CCCCBGGGCCC-------CCCHHHHH--TEEEEEEECCCC
T ss_pred HHHHcCCChHHHHHHHHHHHHHHhcCCCCcChhhcCCh--hhccChhhcch-------hHHHHHHh--cceEEEEcCCcc
Confidence 33456677778899999999888543 2467789998 45667766542 37999998 999999999999
Q ss_pred cccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHHHHh-hcCCCCCC
Q 018126 131 TRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFE-GHKYFGLE 209 (360)
Q Consensus 131 TRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~~f~-~~~~FGl~ 209 (360)
||||++.||+|+||+ ++|||||+++++|++++.+ +++.|||+||||++|++.|++||+ +++|||++
T Consensus 87 TRLg~~~PK~llpV~--~gk~fLe~~ie~l~~~~~~-----------~g~~ip~viMtS~~t~e~t~~~f~~~~~~fGl~ 153 (505)
T 2oeg_A 87 TGMGLCDAKTLLEVK--DGKTFLDFTALQVQYLRQH-----------CSEHLRFMLMDSFNTSASTKSFLKARYPWLYQV 153 (505)
T ss_dssp GGGTCCSCGGGSEEE--TTEEHHHHHHHHHHHHHHH-----------TCTTCEEEEEECHHHHHHHHHHHHHHCHHHHTT
T ss_pred cccCCCCCCcccccC--CCCcHHHHHHHHHHHHHHh-----------cCCCcCEEEEeCCCCHHHHHHHHhhhhhccCCC
Confidence 999999999999998 8999999999999998876 356799999999999999999999 99999999
Q ss_pred CCcEEEEEcCceeeeecCC-ccc-ccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCCccccccCHHHH
Q 018126 210 SDQVTFFQQGTIPCVSKDG-RFI-METPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFL 287 (360)
Q Consensus 210 ~~~v~~f~Q~~~P~~~~~g-ki~-l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN~L~~~~DP~fl 287 (360)
+++|++|.|+++||++.+| +++ ++++..++++|+||||+|.+|+++|++++|.++|++|++|+|+||+ ++++||.|+
T Consensus 154 ~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL-~~~~D~~ll 232 (505)
T 2oeg_A 154 FDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNL-GATIDKRVL 232 (505)
T ss_dssp CCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCT-TCCCCHHHH
T ss_pred ccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCcc-ccccCHHHH
Confidence 9999999999999999988 555 6666679999999999999999999999999999999999999995 899999999
Q ss_pred HHHHHcCCceEEEEeecCCCCcccceEEEEc-----cCCC-------eEEEEecCCChHHHhhcccCCCceeeeccceee
Q 018126 288 GYFIDKGVSAGAKVVRKAYPQEKVGVFVRRG-----KGGP-------LTVVEYSELDPSLASAINQETGRLRFCWSNVCT 355 (360)
Q Consensus 288 G~~~~~~~~~~~kvv~K~~p~E~vGvi~~~~-----~~g~-------~~vvEYsel~~~~~~~~~~~~g~l~f~~gni~~ 355 (360)
|||.+++++++++|++|+.|++++|++|... .+|+ ++++||+|+|++.++++ +|.++|.++||||
T Consensus 233 g~~~~~~ad~~~~v~~k~~~d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~p~e~~~~~---~g~~~f~~~Ninn 309 (505)
T 2oeg_A 233 AYMEKEKIDFLMEVCRRTESDKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCPKADMESF---QDINKYSFFNTNN 309 (505)
T ss_dssp HHHHHHTCSEEEEEEECCTTCCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGSCGGGHHHH---HCTTTTCEEEEEE
T ss_pred HHHHhcCCcEEEEEEEecCCccceeEEEEecccccccCCccccccCceeEEEeccCChhhhhcc---cCccccCeeEEEE
Confidence 9999999999999999999999999999843 4799 99999999999998765 4889999999999
Q ss_pred eeec
Q 018126 356 FAST 359 (360)
Q Consensus 356 h~f~ 359 (360)
|+|+
T Consensus 310 ~~~~ 313 (505)
T 2oeg_A 310 LWIR 313 (505)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9996
No 8
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=100.00 E-value=1.5e-56 Score=455.54 Aligned_cols=274 Identities=21% Similarity=0.243 Sum_probs=242.2
Q ss_pred hcCChHHHHHHHHHHHhcC--CCCCCCcccCCCCCccccccCChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCC
Q 018126 60 ESLDLPRVDRIIRCSLRSQ--GLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSD 137 (360)
Q Consensus 60 ~~iD~~~~~~~~~~~~~~~--~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLg~~~ 137 (360)
..+|++.+.++|++++... ..+|+.++|+|++.+.++++.+.. .++++.|++++ ||+|+|+||||+|||||++.
T Consensus 22 ~~~~~~~f~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~--~~~~~~g~~~l--~k~~vviLAGGlGTRLg~~~ 97 (469)
T 2icy_A 22 SESEKSGFISLVSRYLSGEAQHIEWSKIQTPTDEIVVPYEKMTPV--SQDVAETKNLL--DKLVVLKLNGGLGTTMGCTG 97 (469)
T ss_dssp CHHHHHHHHHHHHHHC------CCGGGCBCCCTTTEEEGGGSCCC--CSCHHHHHHHH--TTEEEEEEECCBSGGGTCCS
T ss_pred chhhHHHHHHHHHHHHhccCCCCcccccccCCcccccChhhcccc--hhhHHHHHHhh--ccceEEEEcCCccccCCCCC
Confidence 4557788999999887543 257889999999888888876531 13456799998 69999999999999999999
Q ss_pred CCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHHHHhhcCCCCCCCCcEEEEE
Q 018126 138 PKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQ 217 (360)
Q Consensus 138 pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~~f~~~~~FGl~~~~v~~f~ 217 (360)
||+|+|| +++|||||+++++|++++.. +++.|||+||||++|++.|++||++|++||+ +|++|.
T Consensus 98 PK~llpv--~~gkp~Le~~i~~l~~~~~~-----------~G~~ip~vimts~~t~e~t~~~f~~~~~fG~---~I~~f~ 161 (469)
T 2icy_A 98 PKSVIEV--RDGLTFLDLIVIQIENLNNK-----------YGCKVPLVLMNSFNTHDDTHKIVEKYTNSNV---DIHTFN 161 (469)
T ss_dssp BGGGSEE--ETTEEHHHHHHHHHHHHHHH-----------HSCCCCEEEEECTTTHHHHHHHHGGGTTSSS---CEEEEE
T ss_pred Ccccccc--CCCCCHHHHHHHHHHHHHHh-----------cCCCccEEEEeCCCCHHHHHHHHHhcccCCc---eEEEEE
Confidence 9999888 47999999999999987654 3567999999999999999999999999998 699999
Q ss_pred cCceeeeecCCcccccCC---CcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCCccccccCHHHHHHHHHcC
Q 018126 218 QGTIPCVSKDGRFIMETP---YKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKG 294 (360)
Q Consensus 218 Q~~~P~~~~~gki~l~~~---~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN~L~~~~DP~flG~~~~~~ 294 (360)
|+++||++.+|+++|+++ +.++++|+||||+|.+|.++|++++|.++|++|++|+|+||+ ++++||.|+|||.+++
T Consensus 162 Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL-~~~~d~~ll~~~~~~~ 240 (469)
T 2icy_A 162 QSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNL-GAIVDLTILKHLIQNK 240 (469)
T ss_dssp CCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBT-TCCCCHHHHHHHHHHT
T ss_pred ecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcC-CcccCHHHHHHHHHcC
Confidence 999999999999999876 789999999999999999999999999999999999999994 8999999999999999
Q ss_pred CceEEEEeecCCCCcccceEEEEccCCCeEEEEecCCChHHHhhcccCCCceeeeccceeeeeec
Q 018126 295 VSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCTFAST 359 (360)
Q Consensus 295 ~~~~~kvv~K~~p~E~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g~l~f~~gni~~h~f~ 359 (360)
++++++|++|+.|++++|++|.. +|+++++||+|+|++.++++.+ .+.|++.||+||+|+
T Consensus 241 a~~t~~v~~k~~~~~~~Gvl~~~--dg~~~vvE~~e~p~~~~~e~k~---~~~~~~~N~g~y~~~ 300 (469)
T 2icy_A 241 NEYCMEVTPKTLADVKGGTLISY--EGKVQLLEIAQVPDEHVNEFKS---IEKFKIFNTNNLWVN 300 (469)
T ss_dssp CSEEEEEEECCTTCCSSCEEEEE--TTEEEEECGGGSCGGGHHHHHS---SSSCCEEEEEEEEEE
T ss_pred CCeeEEEEEeccCCCceeEEEEE--CCEEEEEEEeccChhhhhhhcc---ccccceeeEEEEEEc
Confidence 99999999999999999999986 7899999999999987765322 367888899999996
No 9
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-54 Score=439.48 Aligned_cols=285 Identities=21% Similarity=0.264 Sum_probs=245.0
Q ss_pred hccccccCC--HHHHHHHHHHHhcCChHHHHHHHHHHHhc----CCCCCCCcccCCCCCccccccCChHHHHHHHHHhhh
Q 018126 40 AFALWDELS--PDERDHLVKDIESLDLPRVDRIIRCSLRS----QGLPVAAIEPVPERSVSTVEERTMDERERWWKMGLK 113 (360)
Q Consensus 40 l~~~~~~l~--~~ek~~L~~ql~~iD~~~~~~~~~~~~~~----~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~G~~ 113 (360)
|-+.|+.++ ++||++|.+||+ .+.++|++++.. ...+|+.++|+|++.+.++++.+. |+ .|+.
T Consensus 20 l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~-----~~-~~~~ 88 (488)
T 2i5k_A 20 LNKLADSSKLDDAARAKFENELD-----SFFTLFRRYLVEKSSRTTLEWDKIKSPNPDEVVKYEIISQ-----QP-ENVS 88 (488)
T ss_dssp TTCCC--------CCSCTHHHHH-----HHHHHHHHHHHHHHSCCSCCGGGEECCCTTTEEEHHHHHS-----SC-CCST
T ss_pred HHHHHhhcCCCHHHHHHHHHHHH-----HHHHHHHHHHhcccccCCCcccccccCChhcccChhhccc-----ch-hhhh
Confidence 567788776 778888999886 567788877642 236788999999888777765321 11 2555
Q ss_pred hhcCCCEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcch
Q 018126 114 AISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTD 193 (360)
Q Consensus 114 ~i~~gkvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~ 193 (360)
+ .+|+|+|+||||+|||||++.||+|+|| +++|||||++++++++++.. +++.|||+||||++|+
T Consensus 89 ~--~~k~avViLAGG~GTRmgs~~PK~l~~V--~~gk~~Le~~i~~i~~l~~~-----------~G~~Ip~vImts~~t~ 153 (488)
T 2i5k_A 89 N--LSKLAVLKLNGGLGTSMGCVGPKSVIEV--REGNTFLDLSVRQIEYLNRQ-----------YDSDVPLLLMNSFNTD 153 (488)
T ss_dssp T--GGGEEEEEECCCBSGGGTCCSBSTTSCC--BTTBCHHHHHHHHHHHHHHH-----------HTCCCEEEEECCTTTH
T ss_pred h--cCCceEEEEcCCCcccCCCCCCcccccc--CCCCcHHHHHHHHHHHhHHh-----------cCCCccEEEEECCCCH
Confidence 5 4799999999999999999999999988 56999999999999887654 2567999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCC---cccccCCCChhHhHHHhhCcHHHHHHHCCCeEEE
Q 018126 194 DATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPY---KVAKAPDGNGGVYSALKSSKLLEDMATRGIKYID 270 (360)
Q Consensus 194 ~~t~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~---~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~ 270 (360)
+.|++||+++++||+ +|.+|.|+++||++.+|+++|+.+. +++++|+||||+|.+|..+|++++|.++|++|++
T Consensus 154 e~t~~~~~~~~~fg~---~i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~ 230 (488)
T 2i5k_A 154 KDTEHLIKKYSANRI---RIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILF 230 (488)
T ss_dssp HHHHHHHGGGCSSSC---EEEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhccccCc---eEEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEE
Confidence 999999999999998 5999999999999999999998764 6899999999999999999999999999999999
Q ss_pred EEcCCCccccccCHHHHHHHHHcCCceEEEEeecCCCCcccceEEEEccCCCeEEEEecCCChHHHhhcccCCCceeeec
Q 018126 271 CYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCW 350 (360)
Q Consensus 271 v~~vDN~L~~~~DP~flG~~~~~~~~~~~kvv~K~~p~E~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g~l~f~~ 350 (360)
|+|+|| |++++||.++|||..++++++++|++|++|++++|+||+. +|+.++|||+|++++.+++++ +.+.|+.
T Consensus 231 V~ngDn-L~~~~d~~~L~~~~~~~a~~t~~v~~~~~p~~~yG~Iv~~--dG~~~iVE~~e~~~e~~~~~~---~~~~~~~ 304 (488)
T 2i5k_A 231 VSNGDN-LGATVDLKILNHMIETGAEYIMELTDKTRADVKGGTLISY--DGQVRLLEVAQVPKEHIDEFK---NIRKFTN 304 (488)
T ss_dssp EECTTB-SSCCCCHHHHHHHHHSCCSEEEEEEECCGGGSSSCEEEEE--TTEEEEECGGGSCTTSHHHHT---CTTTCCE
T ss_pred EEeCCc-CCCcccHHHHHHHHhcCCcEEEEEEEecCCCCceeEEEEE--CCcEEEEEeccCCHHHHhhcc---cccccCE
Confidence 999999 7899999999999999999999999999999999999986 789999999999999887653 4578888
Q ss_pred cceeeeeec
Q 018126 351 SNVCTFAST 359 (360)
Q Consensus 351 gni~~h~f~ 359 (360)
.|++||+|+
T Consensus 305 ~Ntgi~~f~ 313 (488)
T 2i5k_A 305 FNTNNLWIN 313 (488)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 999999996
No 10
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=99.17 E-value=1.2e-10 Score=118.41 Aligned_cols=169 Identities=18% Similarity=0.221 Sum_probs=119.2
Q ss_pred CCEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHH
Q 018126 118 GKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 197 (360)
Q Consensus 118 gkvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~ 197 (360)
+.+|||+||||.||||....||.|+|| .+|+++++.++.+.++ +.. ..+|.| .+..+.++
T Consensus 11 ~~~~vvILAaG~GtRm~~~~pK~l~pv---~gkp~i~~~l~~~~~~---------------g~~-~i~vv~-~~~~~~i~ 70 (501)
T 3st8_A 11 GDTAVLVLAAGPGTRMRSDTPKVLHTL---AGRSMLSHVLHAIAKL---------------APQ-RLIVVL-GHDHQRIA 70 (501)
T ss_dssp -CEEEEEEECSCCGGGCCSSCGGGCEE---TTEEHHHHHHHHHHHH---------------CCS-EEEEEE-CTTHHHHH
T ss_pred CCceEEEECCcCcccCCCCCCHHHeEE---CChhHHHHHHHHHHhC---------------CCC-EEEEEe-CCCHHHHH
Confidence 689999999999999999999999999 8999999998877532 211 234444 57788999
Q ss_pred HHHhh-cCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCC
Q 018126 198 KYFEG-HKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDN 276 (360)
Q Consensus 198 ~~f~~-~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN 276 (360)
+||.+ .+.||.+ |.+..| ..|.|.|+....... .+.+.-...+.+.+.|.
T Consensus 71 ~~~~~~~~~~~~~---i~~~~q---------------------~~~lGTa~Av~~a~~-----~l~~~~~~~~lvl~gd~ 121 (501)
T 3st8_A 71 PLVGELADTLGRT---IDVALQ---------------------DRPLGTGHAVLCGLS-----ALPDDYAGNVVVTSGDT 121 (501)
T ss_dssp HHHHHHHHHHTSC---CEEEEC---------------------SSCCCHHHHHHHHHT-----TSCTTCCSEEEEEETTC
T ss_pred HHHHHHHHhcCCc---EEEEEc---------------------CCCCCcHHHHHHHHH-----HhccccccceeeecCcc
Confidence 99986 3456653 556555 246799987654422 12223346778888888
Q ss_pred ccccccC-HHHHHHHHHcCCceEEEEeecCCCCcccceEEEEccCCC-eEEEEecCCChHHHh
Q 018126 277 ALVRVAD-PTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGP-LTVVEYSELDPSLAS 337 (360)
Q Consensus 277 ~L~~~~D-P~flG~~~~~~~~~~~kvv~K~~p~E~vGvi~~~~~~g~-~~vvEYsel~~~~~~ 337 (360)
+|....+ -.++-++...++++++-+.+..+| ...|++.+.. +|+ ..++|..+-+++...
T Consensus 122 ~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~dp-~~yG~i~~~~-~g~v~~ivEk~~~~~~~~~ 182 (501)
T 3st8_A 122 PLLDADTLADLIATHRAVSAAVTVLTTTLDDP-FGYGRILRTQ-DHEVMAIVEQTDATPSQRE 182 (501)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEEEECSCC-TTSCEEEECT-TCCEEEEECGGGCCHHHHH
T ss_pred eeecHHHHHHHHHHHhhccccceEeeeccCCc-hhcccccccc-ceeEEeeccccCCChhhcc
Confidence 7643221 236788888999998877777666 4568888753 565 567998888877543
No 11
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=98.80 E-value=2.3e-07 Score=86.65 Aligned_cols=156 Identities=15% Similarity=0.173 Sum_probs=104.8
Q ss_pred CCEEEEEecCCCccccCC---CCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchH
Q 018126 118 GKLAVLLLSGGQGTRLGS---SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDD 194 (360)
Q Consensus 118 gkvavvlLAGG~GTRLg~---~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~ 194 (360)
.++.+|+||||.||||+. ..||.++|+ .+++++++.++++.+ .++. ..+|.|.....+
T Consensus 23 ~~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i---~g~pli~~~l~~l~~---------------~g~~-~iivv~~~~~~~ 83 (269)
T 4ecm_A 23 NAMKGIILAGGTGSRLYPITKVTNKHLLPV---GRYPMIYHAVYKLKQ---------------CDIT-DIMIITGKEHMG 83 (269)
T ss_dssp -CEEEEEECCSCCGGGTTTTSSSCGGGSEE---TTEEHHHHHHHHHHH---------------TTCC-EEEEEECTTTHH
T ss_pred cCcEEEEECCCCccccccccCCCCceecEE---CCEEHHHHHHHHHHH---------------CCCC-EEEEECChhhHH
Confidence 478999999999999986 889999999 699999999997753 1211 345555554457
Q ss_pred HHHHHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcC
Q 018126 195 ATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGV 274 (360)
Q Consensus 195 ~t~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~v 274 (360)
.+.+++++...+|++ +.+..| ..|.|.|+...+. ++.+. -+++.+.+.
T Consensus 84 ~~~~~~~~~~~~~~~---i~~~~~---------------------~~~~G~~~al~~a-----~~~~~---~~~~lv~~~ 131 (269)
T 4ecm_A 84 DVVSFLGSGQEFGVS---FTYRVQ---------------------DKAGGIAQALGLC-----EDFVG---NDRMVVILG 131 (269)
T ss_dssp HHHHHHTTSGGGTCE---EEEEEC---------------------SSCCCHHHHHHTT-----HHHHT---TSEEEEEET
T ss_pred HHHHHHhhccccCce---EEEeeC---------------------CccCcHHHHHHHH-----HHhcC---CCcEEEEeC
Confidence 889999876566653 322221 1245666554433 22231 478999999
Q ss_pred CCccccccCHHHHHHHHHcCCceEEEEeecCCCCcccceEEEEccCCCeEEEEecC
Q 018126 275 DNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSE 330 (360)
Q Consensus 275 DN~L~~~~DP~flG~~~~~~~~~~~kvv~K~~p~E~vGvi~~~~~~g~~~vvEYse 330 (360)
|.++ ...--.++-.+...++++++-+.+..+| ...|++... +|+ |+++.|
T Consensus 132 D~~~-~~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~v~~d--~g~--v~~~~e 181 (269)
T 4ecm_A 132 DNIF-SDDIRPYVEEFTNQKEGAKVLLQSVDDP-ERFGVANIQ--NRK--IIEIEE 181 (269)
T ss_dssp TEEE-SSCSHHHHHHHHTSSSSEEEEEEECSCG-GGSEEEEEE--TTE--EEEEEE
T ss_pred CccC-ccCHHHHHHHHHhcCCCeEEEEEECCCC-CCceEEEEc--CCE--EEEEEE
Confidence 9986 4455568888888888887776665543 567887764 453 444443
No 12
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=98.68 E-value=1.7e-07 Score=86.98 Aligned_cols=179 Identities=17% Similarity=0.143 Sum_probs=109.2
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (360)
++.+|+||||.||||+ ||.+.|| .||+++++.++++.+. ++ -..+|-| + ++.+.+
T Consensus 2 ~~~aiIlA~G~stRlp---~K~L~~i---~GkPli~~~l~~l~~~---------------~~-~~ivVv~-~--~~~i~~ 56 (252)
T 3oam_A 2 SFTVVIPARYQSTRLP---GKPLADI---GGKPMIQWVYEQAMQA---------------GA-DRVIIAT-D--DERVEQ 56 (252)
T ss_dssp CEEEEEECCCCCSSST---TGGGCEE---TTEEHHHHHHHHHHHT---------------TC-SEEEEEE-S--CHHHHH
T ss_pred ceEEEEecCcCCCCCC---CcceeeE---CCEEHHHHHHHHHHhC---------------CC-CeEEEEC-C--HHHHHH
Confidence 5889999999999995 7999999 8999999999877531 21 1345555 2 588999
Q ss_pred HHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCCcc
Q 018126 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (360)
Q Consensus 199 ~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN~L 278 (360)
++++ ||.+ +.+.. ...|.|.|+++.++.. +...+-+++.+++.|++|
T Consensus 57 ~~~~---~g~~---v~~~~---------------------~~~~~Gt~~~~~~~~~------l~~~~~d~vlv~~gD~Pl 103 (252)
T 3oam_A 57 AVQA---FGGV---VCMTS---------------------PNHQSGTERLAEVVAK------MAIPADHIVVNVQGDEPL 103 (252)
T ss_dssp HHHH---TTCE---EEECC---------------------TTCCSHHHHHHHHHHH------TTCCTTSEEEECCTTCTT
T ss_pred HHHH---cCCE---EEEcC---------------------CCCCCcHHHHHHHHHh------cCcCCCCEEEEEeCCeee
Confidence 9985 5542 22111 1246788887766532 211245899999999987
Q ss_pred ccccCH-HHHHHHHHcCCceEEEEeecCCCCc----ccceEEEEccCCCeEEEEecC--CChHHHhhcccCCC-ceeeec
Q 018126 279 VRVADP-TFLGYFIDKGVSAGAKVVRKAYPQE----KVGVFVRRGKGGPLTVVEYSE--LDPSLASAINQETG-RLRFCW 350 (360)
Q Consensus 279 ~~~~DP-~flG~~~~~~~~~~~kvv~K~~p~E----~vGvi~~~~~~g~~~vvEYse--l~~~~~~~~~~~~g-~l~f~~ 350 (360)
....+- .++-.+...++++++-+++-.+|.+ .+|.++.. .+|+ ++.+++ ++..- ........ .-.-+.
T Consensus 104 i~~~~i~~l~~~~~~~~~~~~~~~~~v~~~~~~~~p~~g~vv~d-~~g~--v~~fsr~~i~~~~-~~~~~~~~~~~~~~~ 179 (252)
T 3oam_A 104 IPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITD-KSGY--ALYFSRATIPWDR-DNFAKADKAIVQPLL 179 (252)
T ss_dssp CCHHHHHHHHHHHHHSSCSEEEEEEEECCHHHHTCTTSCEEEEC-TTSB--EEEEESSCSSCCH-HHHHSSSCCCCSCEE
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEeeecCCHHHhhCCCceEEEEC-CCCe--EEEEeCCCCCCCC-Cccccccccccccce
Confidence 432221 2566666667888766655443322 23666653 3564 666666 43221 11000000 001234
Q ss_pred cceeeeeec
Q 018126 351 SNVCTFAST 359 (360)
Q Consensus 351 gni~~h~f~ 359 (360)
.|+++++|+
T Consensus 180 ~n~GiY~~~ 188 (252)
T 3oam_A 180 RHIGIYAYR 188 (252)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEcC
Confidence 689999886
No 13
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=98.68 E-value=5.3e-07 Score=85.73 Aligned_cols=151 Identities=19% Similarity=0.239 Sum_probs=97.9
Q ss_pred CEEEEEecCCCccccC---CCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHH
Q 018126 119 KLAVLLLSGGQGTRLG---SSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDA 195 (360)
Q Consensus 119 kvavvlLAGG~GTRLg---~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~ 195 (360)
++.+|+||||.||||+ ...||.++|| .+|+++++.++.+.. .++. ..+|.|++...+.
T Consensus 2 ~~~aIILAgG~gtRl~plT~~~pK~llpi---~gkpli~~~l~~l~~---------------~gi~-~I~vv~~~~~~~~ 62 (293)
T 1fxo_A 2 KRKGIILAGGSGTRLHPATLAISKQLLPV---YDKPMIYYPLSTLML---------------AGIR-EILIISTPQDTPR 62 (293)
T ss_dssp CEEEEEECCCCCTTTTTHHHHSCGGGSEE---TTEETTHHHHHHHHH---------------TTCC-EEEEEECTTTHHH
T ss_pred CceEEEECCCCCCcCccccCCCCceeCeE---CCEeHHHHHHHHHHH---------------CCCC-EEEEEeccccHHH
Confidence 4678999999999998 4679999999 789999998887752 1211 3456676777788
Q ss_pred HHHHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCC
Q 018126 196 TRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVD 275 (360)
Q Consensus 196 t~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vD 275 (360)
+++++.+...||++ +.+..| ..|.|.++.+.... +.+ . -+.+.+...|
T Consensus 63 i~~~l~~g~~~g~~---i~~~~~---------------------~~~~G~~~al~~a~-----~~i-~--~~~~~lv~gD 110 (293)
T 1fxo_A 63 FQQLLGDGSNWGLD---LQYAVQ---------------------PSPDGLAQAFLIGE-----SFI-G--NDLSALVLGD 110 (293)
T ss_dssp HHHHHTTSGGGTCE---EEEEEC---------------------SSCCCGGGHHHHTH-----HHH-T--TSEEEEEETT
T ss_pred HHHHHhcccccCce---EEEeeC---------------------CCCCCHHHHHHHHH-----HHh-C--CCCEEEEECC
Confidence 99999875556653 332222 13678887665432 222 1 2455556699
Q ss_pred CccccccCHHHHHHHHHcCCceEEEEeecCCCCcccceEEEEccCCC
Q 018126 276 NALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGP 322 (360)
Q Consensus 276 N~L~~~~DP~flG~~~~~~~~~~~kvv~K~~p~E~vGvi~~~~~~g~ 322 (360)
|++....-..++-.+.+.+.++++-+.+-.+| ++.|++... .+|+
T Consensus 111 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp-~~~g~v~~d-~~g~ 155 (293)
T 1fxo_A 111 NLYYGHDFHELLGSASQRQTGASVFAYHVLDP-ERYGVVEFD-QGGK 155 (293)
T ss_dssp EEEECTTHHHHHHHHHTCCSSEEEEEEECSCG-GGSEEEEEC-TTSC
T ss_pred hhccCccHHHHHHHHHhcCCCcEEEEEECCCc-ccCcEEEEC-CCCc
Confidence 99754333346666665666666555554454 577887653 3554
No 14
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=98.58 E-value=1.5e-06 Score=82.86 Aligned_cols=150 Identities=19% Similarity=0.173 Sum_probs=95.7
Q ss_pred EEEEEecCCCccccC---CCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHH
Q 018126 120 LAVLLLSGGQGTRLG---SSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDAT 196 (360)
Q Consensus 120 vavvlLAGG~GTRLg---~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t 196 (360)
+.+|+||||.||||+ ...||.++|| .+|+++++.++.+.. .++. ..+|.|+.+..+.+
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~llpi---~gkpli~~~l~~l~~---------------~gi~-~Iivv~~~~~~~~i 64 (295)
T 1lvw_A 4 MKGIVLAGGSGTRLYPITRAVSKQLLPI---YDKPMIYYPLSVLML---------------AGIR-DILIISTPRDLPLY 64 (295)
T ss_dssp CEEEEECCCCCSTTTTTTTSSCGGGSEE---TTEETTHHHHHHHHH---------------TTCC-EEEEEECTTTHHHH
T ss_pred eEEEEECCCCCCccccccCCCCceecEE---CCeeHHHHHHHHHHH---------------CCCC-eEEEEeccchHHHH
Confidence 568999999999998 5679999999 789999998887752 1211 34566666777889
Q ss_pred HHHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCC
Q 018126 197 RKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDN 276 (360)
Q Consensus 197 ~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN 276 (360)
++++.+...+|++ +.+..| ..|.|.++.+.... +.+ . .-.++.+. .||
T Consensus 65 ~~~l~~g~~~g~~---i~~~~~---------------------~~~~G~~~al~~a~-----~~i-~-~~~~~lv~-gD~ 112 (295)
T 1lvw_A 65 RDLLGDGSQFGVR---FSYRVQ---------------------EEPRGIADAFIVGK-----DFI-G-DSKVALVL-GDN 112 (295)
T ss_dssp HHHHTTSGGGTSE---EEEEEC---------------------SSCCCGGGHHHHTH-----HHH-T-TSCEEEEE-TTC
T ss_pred HHHhhhccccCce---EEEeeC---------------------CCCCChHHHHHHHH-----HHh-C-CCcEEEEE-CCc
Confidence 9999875556653 332222 13578777655432 222 1 22444554 899
Q ss_pred ccccccCHHHHHHHHHcCCceEEEEeecCCCCcccceEEEEccCCC
Q 018126 277 ALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGP 322 (360)
Q Consensus 277 ~L~~~~DP~flG~~~~~~~~~~~kvv~K~~p~E~vGvi~~~~~~g~ 322 (360)
++....-..++-.+.+.+.++++-+.+-.+| ++.|++... .+|+
T Consensus 113 ~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp-~~~g~v~~d-~~g~ 156 (295)
T 1lvw_A 113 VFYGHRFSEILRRAASLEDGAVIFGYYVRDP-RPFGVVEFD-SEGR 156 (295)
T ss_dssp CEECTTHHHHHHHHHTCCSSEEEEEEECSCC-TTSEEEEEC-TTSB
T ss_pred cccCcCHHHHHHHHHHcCCCcEEEEEECCCc-ccCCEEEEC-CCCc
Confidence 9754333446666655556665555555555 467877653 3454
No 15
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=98.57 E-value=1.3e-06 Score=83.29 Aligned_cols=156 Identities=19% Similarity=0.211 Sum_probs=100.2
Q ss_pred EEEEEecCCCccccC---CCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHH
Q 018126 120 LAVLLLSGGQGTRLG---SSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDAT 196 (360)
Q Consensus 120 vavvlLAGG~GTRLg---~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t 196 (360)
+.+|+||||.||||+ ...||.++|| .+|+++++.++.+.. .++. .++|.|+.+..+.+
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~llpi---~gkpli~~~l~~l~~---------------~gi~-~I~vv~~~~~~~~i 64 (296)
T 1mc3_A 4 MKGIILAGGSGTRLHPITRGVSKQLLPI---YDKPMIYYPLSVLML---------------AGIR-EILIITTPEDKGYF 64 (296)
T ss_dssp CEEEEECCCCCGGGHHHHTTSCGGGSEE---TTEETTHHHHHHHHH---------------TTCC-EEEEEECTTTHHHH
T ss_pred cEEEEECCCCCCcCCcccCCCCceeeEE---CCeeHHHHHHHHHHh---------------CCCC-cEEEEechhHHHHH
Confidence 568999999999998 6789999999 789999998887752 1211 34566666777889
Q ss_pred HHHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCC
Q 018126 197 RKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDN 276 (360)
Q Consensus 197 ~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN 276 (360)
++++.+...||++ +.+..| ..|.|.++.+.... +.+ . .-.++. +..||
T Consensus 65 ~~~l~~g~~~g~~---i~~~~~---------------------~~~~G~~~al~~a~-----~~i-~-~~~~~l-v~gD~ 112 (296)
T 1mc3_A 65 QRLLGDGSEFGIQ---LEYAEQ---------------------PSPDGLAQAFIIGE-----TFL-N-GEPSCL-VLGDN 112 (296)
T ss_dssp HHHHTTSGGGTCE---EEEEEC---------------------SSCCCSTHHHHHTH-----HHH-T-TSCEEE-EETTE
T ss_pred HHHHhcccccCce---EEEecc---------------------CCCCCHHHHHHHHH-----HHh-C-CCCEEE-EECCc
Confidence 9999875556653 333222 13578776554332 222 1 223444 44899
Q ss_pred ccccccCHHHHHHHHHcCCceEEEEeecCCCCcccceEEEEccCCCeEEEEecC
Q 018126 277 ALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSE 330 (360)
Q Consensus 277 ~L~~~~DP~flG~~~~~~~~~~~kvv~K~~p~E~vGvi~~~~~~g~~~vvEYse 330 (360)
++....-..++-.+...+.++.+-+.+-.+| ++.|++... .+| .|+.+.|
T Consensus 113 ~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp-~~yg~v~~d-~~g--~v~~~~e 162 (296)
T 1mc3_A 113 IFFGQGFSPKLRHVAARTEGATVFGYQVMDP-ERFGVVEFD-DNF--RAISLEE 162 (296)
T ss_dssp EEECSSCHHHHHHHTTCCSSEEEEEEECSCC-SSSBBCEEE-TTE--EEEECCB
T ss_pred cccccCHHHHHHHHHHcCCCCEEEEEECCCc-ccCCEEEEC-CCC--cEEEEEE
Confidence 9755455567777765566665555555555 478888764 244 4555544
No 16
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=98.55 E-value=9.7e-07 Score=82.52 Aligned_cols=173 Identities=16% Similarity=0.125 Sum_probs=96.0
Q ss_pred EEEEEecCCCccccCC---CCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHH
Q 018126 120 LAVLLLSGGQGTRLGS---SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDAT 196 (360)
Q Consensus 120 vavvlLAGG~GTRLg~---~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t 196 (360)
+.+|+||||.||||+. ..||.++|| .||+++++.++++... + +.-++....+..+.+
T Consensus 3 ~~avIlAaG~gtRl~plt~~~pK~ll~i---~gkpli~~~l~~l~~~---------------g--i~~i~vv~~~~~~~i 62 (281)
T 3juk_A 3 KKCLFPAAGYGTRFLPITKTIPKEMLPI---VDKPLIQYAVEEAMEA---------------G--CEVMAIVTGRNKRSL 62 (281)
T ss_dssp CEEEEECCSCCGGGTTGGGTSCGGGCBS---SSSBHHHHHHHHHHHH---------------T--CCEEEEEECTTHHHH
T ss_pred eEEEEECCcCCcccCccccCCCcccceE---CCEEHHHHHHHHHHhC---------------C--CCEEEEEecCCHHHH
Confidence 5689999999999986 889999999 6899999999987631 2 223444445677899
Q ss_pred HHHHhhcCCCCCCCCcEEEEEcCceeeee------cCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEE
Q 018126 197 RKYFEGHKYFGLESDQVTFFQQGTIPCVS------KDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYID 270 (360)
Q Consensus 197 ~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~------~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~ 270 (360)
.++|.+... ++.. +-..+..-.+. ...++... ....|.|.|+..... ++.+ +-+++.
T Consensus 63 ~~~~~~~~~--l~~~---l~~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~Gt~~al~~a-----~~~l---~~~~~l 125 (281)
T 3juk_A 63 EDYFDTSYE--IEHQ---IQGTNKENALKSIRNIIEKCCFSYV----RQKQMKGLGHAILTG-----EALI---GNEPFA 125 (281)
T ss_dssp HHHTSCCC-------------CCHHHHHHHHHHHHHHCEEEEE----ECSSCCCHHHHHHHT-----HHHH---CSSCEE
T ss_pred HHHHhcchh--hhhh---hhcccchhhhhhhhccccCccEEEE----ecCCCCCcHHHHHHH-----HHHc---CCCCEE
Confidence 999976422 2110 00000000000 00001000 012367887655433 2223 126789
Q ss_pred EEcCCCcccccc-----CHHHHHHHHHcCCce-EEEEeecCCCCcccceEEEEcc--CCCeEEEEecCCC
Q 018126 271 CYGVDNALVRVA-----DPTFLGYFIDKGVSA-GAKVVRKAYPQEKVGVFVRRGK--GGPLTVVEYSELD 332 (360)
Q Consensus 271 v~~vDN~L~~~~-----DP~flG~~~~~~~~~-~~kvv~K~~p~E~vGvi~~~~~--~g~~~vvEYsel~ 332 (360)
|.+.|.+ .... --.++-++...++.+ ++..++.. +....|++... . +|-..|.++.|=|
T Consensus 126 v~~~D~~-~~~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~-~~~~~g~v~~~-~~~~g~~~v~~~~Ekp 192 (281)
T 3juk_A 126 VILADDL-CISHDHPSVLKQMTSLYQKYQCSIVAIEEVALE-EVSKYGVIRGE-WLEEGVYEIKDMVEKP 192 (281)
T ss_dssp EECTTEE-EECTTSCCHHHHHHHHHHHHCSCEEEEEECCTT-TGGGSEEEEEE-EEETTEEEEEEEEESC
T ss_pred EEeCCee-ccCccchHHHHHHHHHHHHcCCCEEEEEEechh-hcccCCEEEec-cCCCCceEEeEEEECc
Confidence 9999995 4443 334777777767622 23333323 34567887653 2 4533565555543
No 17
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=98.51 E-value=1.4e-06 Score=83.05 Aligned_cols=174 Identities=14% Similarity=0.101 Sum_probs=102.4
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (360)
++.+|+||||.||||+. ||.+.|++ +.+++++++.++++... ++. ..+|.|.....+.+++
T Consensus 5 ~~~~vIlAaG~g~R~~~--~K~l~~ig-~~g~pli~~~l~~~~~~---------------~~~-~i~vv~~~~~~~~~~~ 65 (303)
T 3pnn_A 5 KPTLFVLAAGMGSRYGS--LKQLDGIG-PGGDTIMDYSVYDAIRA---------------GFG-RLVFVIRHSFEKEFRE 65 (303)
T ss_dssp CCEEEEECTTCBCTTSS--BCCCCCCS-TTSCCHHHHHHHHHHHH---------------TCC-EEEEEECGGGHHHHHH
T ss_pred ceEEEEECCCCcccCCC--CceEeEcC-CCCeeHHHHHHHHHHHC---------------CCC-eEEEEcCchHHHHHHH
Confidence 57889999999999986 89998885 25899999998876531 211 3455555444589999
Q ss_pred HHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCCcc
Q 018126 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (360)
Q Consensus 199 ~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN~L 278 (360)
+|.+...++. +|.+..|+..- +.....+... ...|.|.|+........ + . +.+.|.+.|++.
T Consensus 66 ~~~~~~~~~~---~i~~~~~~~~~-~~~~~~~~~~-----~~~~~Gt~~al~~a~~~--i----~---~~~lV~~gD~l~ 127 (303)
T 3pnn_A 66 KILTKYEGRI---PVELVFQELDR-LPEGFSCPEG-----REKPWGTNHAVLMGRDA--I----R---EPFAVINADDFY 127 (303)
T ss_dssp HTHHHHTTTS---CEEEEECCTTC-CCTTCCCCTT-----CCSCCCHHHHHHTTTTT--C----C---SCEEEEESSCBC
T ss_pred HHHHHhccCC---cEEEEeccccc-cccccccccc-----ccccCCcHHHHHHHHHh--c----C---CCEEEEECCeec
Confidence 9986433443 46676666311 1111121111 12478888776655432 2 1 456777888863
Q ss_pred cccc-CHHHHHHHHH---cCCceEEEEeecCCCCccc-----ceEEEEccCCC-eEEEEecCC
Q 018126 279 VRVA-DPTFLGYFID---KGVSAGAKVVRKAYPQEKV-----GVFVRRGKGGP-LTVVEYSEL 331 (360)
Q Consensus 279 ~~~~-DP~flG~~~~---~~~~~~~kvv~K~~p~E~v-----Gvi~~~~~~g~-~~vvEYsel 331 (360)
... --.++-++.+ .++++++-+.+-.+|-... |++ ..+.+|+ ..++|-.+.
T Consensus 128 -~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~G~v-~~d~~g~v~~i~Ekp~~ 188 (303)
T 3pnn_A 128 -GRNGFEVLARKLMTLEGKQGEYCMVGYRVGNTLSESGGVSRGVC-QVDEKHLLTGVVERTGI 188 (303)
T ss_dssp -CHHHHHHHHHHHHTTTTCSSEEEEEEEEGGGSCBTTBCEEEEEE-EECTTSBEEEEEEEEEE
T ss_pred -CHHHHHHHHHHHHHhccccCceEEEEEECCCccCccCceeeeeE-eeCCCCcEEEEEECCCC
Confidence 321 2237777765 5677776555554552333 444 4444564 234555433
No 18
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=98.50 E-value=2.5e-06 Score=84.50 Aligned_cols=168 Identities=13% Similarity=0.220 Sum_probs=100.8
Q ss_pred CEEEEEecCCCccccC---CCCCCCceeecCCCCC-ccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchH
Q 018126 119 KLAVLLLSGGQGTRLG---SSDPKGCVNIGLPSGK-SLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDD 194 (360)
Q Consensus 119 kvavvlLAGG~GTRLg---~~~pKg~~~i~l~s~k-sllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~ 194 (360)
++.+|+||||.||||+ .+.||.++|+ .++ +++++.++++.+ .++. ..+|.| .+..+
T Consensus 12 ~~~avILAaG~gtRl~plT~~~pK~llpi---~gk~pli~~~l~~l~~---------------~gi~-~i~vv~-~~~~~ 71 (420)
T 3brk_X 12 DAMAYVLAGGRGSRLKELTDRRAKPAVYF---GGKARIIDFALSNALN---------------SGIR-RIGVAT-QYKAH 71 (420)
T ss_dssp GEEEEEEECCCCGGGGGGGSSSCGGGSEE---TTTEETHHHHHHHHHH---------------TTCC-EEEEEE-CTTCH
T ss_pred ceEEEEEcCCCCCccchhhcCCccccccc---CCCCcHHHHHHHHHHh---------------CCCC-eEEEEe-CCChH
Confidence 5888999999999998 7789999999 688 999999887763 1211 234545 45678
Q ss_pred HHHHHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccC---CCChhHhHHHhhCcHHHHHHHCCCeEEEE
Q 018126 195 ATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAP---DGNGGVYSALKSSKLLEDMATRGIKYIDC 271 (360)
Q Consensus 195 ~t~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P---~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v 271 (360)
.+.+++.+. ||++.. +.+..++.+. +..-...| .|.++..... ++.+...+.+++.+
T Consensus 72 ~i~~~~~~~--~~~~~~----~~~~~v~i~~---------~~~~~~~~~~~~Gt~~al~~a-----~~~l~~~~~~~~lv 131 (420)
T 3brk_X 72 SLIRHLQRG--WDFFRP----ERNESFDILP---------ASQRVSETQWYEGTADAVYQN-----IDIIEPYAPEYMVI 131 (420)
T ss_dssp HHHHHHHHH--SCCCCG----GGTCEEEEEC---------CC-------CCCCHHHHHHTT-----HHHHHHHCCSEEEE
T ss_pred HHHHHHhhh--hccccc----cccCCEEEeC---------ccccccCCccccCCHHHHHHH-----HHHHHhcCCCEEEE
Confidence 899999864 555320 0011111110 00000012 5665554432 33343334578999
Q ss_pred EcCCCccccccCHHHHHHHHHcCCceEEEEeec-CCCCcccceEEEEccCCCeEEEEecC
Q 018126 272 YGVDNALVRVADPTFLGYFIDKGVSAGAKVVRK-AYPQEKVGVFVRRGKGGPLTVVEYSE 330 (360)
Q Consensus 272 ~~vDN~L~~~~DP~flG~~~~~~~~~~~kvv~K-~~p~E~vGvi~~~~~~g~~~vvEYse 330 (360)
.+.|.+ ....--.++-.+...++++++-+.+. ..+....|++... .+|+ |+++.|
T Consensus 132 ~~~D~~-~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d-~~g~--v~~~~e 187 (420)
T 3brk_X 132 LAGDHI-YKMDYEYMLQQHVDSGADVTIGCLEVPRMEATGFGVMHVN-EKDE--IIDFIE 187 (420)
T ss_dssp EESSCE-ECBCTHHHHHHHHHTTCSEEEEEEEEETTGGGGSEEEEEC-TTSB--EEEEEE
T ss_pred ecccEE-EchHHHHHHHHHHHcCCeEEEEEeecCccccCcccEEEEC-CCCc--EEEeEe
Confidence 999995 34444558888888888876655442 1223467887653 3454 444444
No 19
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=98.47 E-value=9.9e-07 Score=84.11 Aligned_cols=146 Identities=18% Similarity=0.156 Sum_probs=85.1
Q ss_pred CEEEEEecCCCccccC---C-CCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchH
Q 018126 119 KLAVLLLSGGQGTRLG---S-SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDD 194 (360)
Q Consensus 119 kvavvlLAGG~GTRLg---~-~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~ 194 (360)
++.+|+||||.||||+ . +.||.++|+. .+++++++.++++... + -.++|.|.....+
T Consensus 4 ~~~avIlAgG~gtRl~plt~~~~pK~ll~i~--gg~pli~~~l~~l~~~----------------~-~~i~vv~~~~~~~ 64 (308)
T 2qh5_A 4 KIKNILLSGGSGKRLWPLSRSLYPKQFLKLF--DHKSLFELSFKRNASL----------------V-DETLIVCNEKHYF 64 (308)
T ss_dssp CEEEEEECC-------------CCGGGCTTB--TTBCHHHHHHHHHHTT----------------C-SEEEEEEEGGGHH
T ss_pred ccEEEEEcCCCCccCCccCCCCCCCEEEECC--CCCCHHHHHHHHHHcc----------------C-CCEEEEEChhHHH
Confidence 5788999999999996 2 5799998882 3899999998877531 1 1356677665557
Q ss_pred HHHHHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcC
Q 018126 195 ATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGV 274 (360)
Q Consensus 195 ~t~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~v 274 (360)
.+.+++++. ||++ ++.+..| ..|.|.|+........ + ..-.++.+.+.
T Consensus 65 ~i~~~~~~~--~~~~--~~~~i~~---------------------~~~~gt~~al~~a~~~-----l--~~~~~~lv~~~ 112 (308)
T 2qh5_A 65 LALEEIKNE--IKNK--SVGFLLE---------------------SLSKNTANAIALSALM-----S--DKEDLLIVTPS 112 (308)
T ss_dssp HHHHHTTTT--CSSC--EEEEEEE---------------------SSCCCHHHHHHHHHHT-----S--CTTSEEEEEES
T ss_pred HHHHHHHHh--hCCC--ccEEEeC---------------------CCCCChHHHHHHHHHH-----h--CCCCeEEEEcC
Confidence 888998753 4542 2332222 1256777775544221 1 12357899999
Q ss_pred CCcccccc-CHHHHHH---HHHcCCceEEEEeecCCCCcccceEEE
Q 018126 275 DNALVRVA-DPTFLGY---FIDKGVSAGAKVVRKAYPQEKVGVFVR 316 (360)
Q Consensus 275 DN~L~~~~-DP~flG~---~~~~~~~~~~kvv~K~~p~E~vGvi~~ 316 (360)
|.++.... --.++-. +...++++++-+.+ ..+....|++..
T Consensus 113 D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~-~~~~~~~g~i~~ 157 (308)
T 2qh5_A 113 DHLIKDLQAYENAIKKAIDLAQKGFLVTFGVSI-DKPNTEFGYIES 157 (308)
T ss_dssp SCBCCCHHHHHHHHHHHHHHHHTTCEEEEEEEC-SSCCTTSEEEEC
T ss_pred CccccCHHHHHHHHHHHHHHHhcCCEEEEEEec-CCCCCCceEEEE
Confidence 99863221 1234554 45567766665555 345567888864
No 20
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=98.45 E-value=2.4e-06 Score=85.11 Aligned_cols=176 Identities=14% Similarity=0.238 Sum_probs=95.4
Q ss_pred CEEEEEecCCCccccC---CCCCCCceeecCCCCC-ccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchH
Q 018126 119 KLAVLLLSGGQGTRLG---SSDPKGCVNIGLPSGK-SLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDD 194 (360)
Q Consensus 119 kvavvlLAGG~GTRLg---~~~pKg~~~i~l~s~k-sllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~ 194 (360)
++.+|+||||.||||+ .+.||.++|+ .++ +++++.++++.+ .++. ..+|.| .+.++
T Consensus 20 ~~~avILAaG~gtRl~plT~~~pK~llpi---~g~~pli~~~l~~l~~---------------~g~~-~i~vv~-~~~~~ 79 (451)
T 1yp2_A 20 SVLGIILGGGAGTRLYPLTKKRAKPAVPL---GANYRLIDIPVSNCLN---------------SNIS-KIYVLT-QFNSA 79 (451)
T ss_dssp HEEEEEC------CCTTTTTTSCGGGCEE---TTTEETTHHHHHHHHH---------------TTCC-EEEEEE-SCCCH
T ss_pred ceEEEEECCCCCCcccchhcCCcceeeEE---CCcceeHHHHHHHHHH---------------CCCC-EEEEEe-ccCHH
Confidence 4788999999999998 6789999999 688 999999887753 1211 244555 45677
Q ss_pred HHHHHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcC
Q 018126 195 ATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGV 274 (360)
Q Consensus 195 ~t~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~v 274 (360)
.+.++|.+. +|.+-. .++.++.+.++..+ ..+. -...+.|.|+..... ++.+...+-+++.+.+.
T Consensus 80 ~i~~~~~~~--~~~~~~--~~~~~~~v~i~~~~-----~~~~-~~~~~~Gt~~al~~a-----~~~~~~~~~~~~lv~~~ 144 (451)
T 1yp2_A 80 SLNRHLSRA--YASNMG--GYKNEGFVEVLAAQ-----QSPE-NPDWFQGTADAVRQY-----LWLFEEHTVLEYLILAG 144 (451)
T ss_dssp HHHHHHHHH--CC----------CCEEEEEESC-----SSTT-SCCCCCSHHHHHHHT-----HHHHTTSCCSEEEEECS
T ss_pred HHHHHHhhh--hhcccc--cccccCcEEEeccc-----cccc-ccccccCcHHHHHHH-----HHHHHhcCCCeEEEecC
Confidence 888888752 221100 01111112221100 0000 011245776655432 23333334688999999
Q ss_pred CCccccccCHHHHHHHHHcCCceEEEEeecC-CCCcccceEEEEccCCCeEEEEecCCCh
Q 018126 275 DNALVRVADPTFLGYFIDKGVSAGAKVVRKA-YPQEKVGVFVRRGKGGPLTVVEYSELDP 333 (360)
Q Consensus 275 DN~L~~~~DP~flG~~~~~~~~~~~kvv~K~-~p~E~vGvi~~~~~~g~~~vvEYsel~~ 333 (360)
|.+ ....-..++.++...++++++-+.+.. .+....|++... .+| +|+++.|=|.
T Consensus 145 D~~-~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d-~~~--~v~~~~ekp~ 200 (451)
T 1yp2_A 145 DHL-YRMDYEKFIQAHRETDADITVAALPMDEKRATAFGLMKID-EEG--RIIEFAEKPQ 200 (451)
T ss_dssp CEE-CCCCHHHHHHHHHHTTCSEEEEEEEECHHHHTTSEEEEEC-TTS--BEEEEEESCC
T ss_pred cEE-EcCCHHHHHHHHHHcCCcEEEEEEEcChhhcccCCEEEEC-CCC--CEEEEEECCC
Confidence 995 343334578888888888866444322 123467877653 344 4666655443
No 21
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=98.34 E-value=6.4e-07 Score=83.43 Aligned_cols=154 Identities=14% Similarity=0.176 Sum_probs=87.3
Q ss_pred EEEecCCCccccC---CCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHH
Q 018126 122 VLLLSGGQGTRLG---SSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (360)
Q Consensus 122 vvlLAGG~GTRLg---~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (360)
+|+||||.||||+ .+.||.++|| .||+++++.++++... .++. .++|.+. +.++ +.+
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv---~gkpli~~~l~~l~~~--------------~gi~-~iivv~~-~~~~-~~~ 61 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEA---HGQTLFEHSVNSFAAY--------------FAST-PFLFIVR-NVYD-TAV 61 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEE---TTEEHHHHHHGGGGGG--------------TTTS-CEEEEEE-SSTT-HHH
T ss_pred EEEEcCCCCcccccCCCCCCccccEE---CCeEHHHHHHHHHhcc--------------CCCc-eEEEEEC-chhh-hHH
Confidence 6899999999996 4779999999 7999999988866420 0111 2344444 4444 666
Q ss_pred HHhhc-CCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHH---CCCeEEEEEcC
Q 018126 199 YFEGH-KYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMAT---RGIKYIDCYGV 274 (360)
Q Consensus 199 ~f~~~-~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~---~Gi~yi~v~~v 274 (360)
+++++ ..+|.+... .+..| ..|.|.|+..... ++.+.+ .+-+.+.|.+.
T Consensus 62 ~~~~~~~~~~~~~~~-~~~~~---------------------~~~~Gt~~av~~a-----~~~l~~~~~~~~~~~lV~~g 114 (255)
T 4evw_A 62 FVREKATQLGIKQFY-IAELH---------------------TETRGQAETVTLG-----LEELAKQGVDYQGSITVFNI 114 (255)
T ss_dssp HHHHHHHHHTCSSEE-EEEES---------------------SCCSSHHHHHHHH-----HHHHHHTTCCCCSCEEECCT
T ss_pred HHHHHHHHcCCCCce-EEEeC---------------------CCCCCHHHHHHHH-----HHHHhhcccCCCCcEEEEeC
Confidence 66542 224432111 12222 2357887766554 223321 23456889999
Q ss_pred CCccccccCHHHHHHHHHcCCceEEEEeecCCCCcccceEEEEccCCCeEEEEecC
Q 018126 275 DNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSE 330 (360)
Q Consensus 275 DN~L~~~~DP~flG~~~~~~~~~~~kvv~K~~p~E~vGvi~~~~~~g~~~vvEYse 330 (360)
|++.-....+.+ ..+++.++-+.+-.+| +.|++... .+|..+|+++.|
T Consensus 115 D~l~~~~~~~~~-----~~~~~~~i~~~~~~~p--~yG~v~~d-~~g~~~V~~i~E 162 (255)
T 4evw_A 115 DTFRPNFVFPDI-----SQHSDGYLEVFQGGGD--NWSFAKPE-HAGSTKVIQTAE 162 (255)
T ss_dssp TEECTTCCCCGG-----GGSSSEEEEEEECCSS--CSCEEEES-STTCCBEEEEES
T ss_pred CEEEecchhHHH-----hhcCCcEEEEEecCCC--ceeEEEEC-CCCCeEEEEEEe
Confidence 996422221222 3556665555444444 78988764 345224555543
No 22
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=98.31 E-value=7.8e-06 Score=74.87 Aligned_cols=169 Identities=19% Similarity=0.247 Sum_probs=94.7
Q ss_pred EEEEEecCCCccccCC---CCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHH
Q 018126 120 LAVLLLSGGQGTRLGS---SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDAT 196 (360)
Q Consensus 120 vavvlLAGG~GTRLg~---~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t 196 (360)
+.+|+||||.||||+. +.||.+.|+ .||+++++.++++.+ .++ -..+|.|+ +.++.+
T Consensus 3 ~~avIlAaG~gtRl~~lt~~~pK~l~~i---~gkpli~~~l~~l~~---------------~g~-~~i~vv~~-~~~~~i 62 (259)
T 1tzf_A 3 SKAVILAGGLGTRLSEETIVKPKPMVEI---GGKPILWHIMKMYSV---------------HGI-KDFIICCG-YKGYVI 62 (259)
T ss_dssp CEEEEEECSCC--------CCCGGGCEE---TTEEHHHHHHHHHHH---------------TTC-CEEEEEEC-TTHHHH
T ss_pred cEEEEECCCCcccCCCccCCCCccccEE---CCEEHHHHHHHHHHH---------------CCC-CEEEEEcc-cCHHHH
Confidence 5689999999999985 679999999 699999998887653 121 13455565 456889
Q ss_pred HHHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcc----cccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEE
Q 018126 197 RKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKV----AKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCY 272 (360)
Q Consensus 197 ~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i----~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~ 272 (360)
++++.+...++ ..+.+..|+.--.+- .+ ...++.+ ...+.|.|+...+.... ++ +-+++.+.
T Consensus 63 ~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~---~~~~~~v~~~~~~~~~gt~~al~~a~~~--~~-----~~~~~lv~ 128 (259)
T 1tzf_A 63 KEYFANYFLHM---SDVTFHMAENRMEVH-HK---RVEPWNVTLVDTGDSSMTGGRLKRVAEY--VK-----DDEAFLFT 128 (259)
T ss_dssp HHHHHTHHHHH---SCEEEEGGGTEEEET-TC---CCCCCEEEEEECCSSCCHHHHHHHTGGG--TT-----TSSCEEEE
T ss_pred HHHHhhccccc---ccccccccccceeee-ec---cccccceeeeecccccCcHHHHHHHHHh--cC-----CCCcEEEE
Confidence 99997632111 013332222100000 00 0012211 12367888776554322 21 23678888
Q ss_pred cCCCccccccCHHHHHHHHHcCCceEEEEeecCCCCcccceEEEEccCCCeEEEEecC
Q 018126 273 GVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSE 330 (360)
Q Consensus 273 ~vDN~L~~~~DP~flG~~~~~~~~~~~kvv~K~~p~E~vGvi~~~~~~g~~~vvEYse 330 (360)
+.|++. ...-..++-++...++++++..++ +....|.+... +| .|+++.|
T Consensus 129 ~~D~~~-~~~~~~~~~~~~~~~~~~t~~~~~---~~~~~g~v~~~--~g--~v~~~~e 178 (259)
T 1tzf_A 129 YGDGVA-DLDIKATIDFHKAHGKKATLTATF---PPGRFGALDIQ--AG--QVRSFQE 178 (259)
T ss_dssp ETTEEE-CCCHHHHHHHHHHHCCSEEEEEEC---CCCCSEEEEEE--TT--EEEEEEE
T ss_pred ECCEec-ccCHHHHHHHHHHhCCeEEEEEec---CCCCccEEEEc--CC--EEEEEEe
Confidence 999963 333345788887778877654332 24567877654 55 3555554
No 23
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=98.23 E-value=6e-06 Score=77.59 Aligned_cols=152 Identities=19% Similarity=0.173 Sum_probs=95.0
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (360)
++.+|+||||.||||+ +|.+.|| .||+++++.++++.+. ++ -..+|-|. ++.+.+
T Consensus 18 ~~~aIIlA~G~stRlp---~K~L~~i---~GkPmi~~~l~~l~~~---------------~i-~~IvV~t~---~~~i~~ 72 (264)
T 3k8d_A 18 SFVVIIPARYASTRLP---GKPLVDI---NGKPMIVHVLERARES---------------GA-ERIIVATD---HEDVAR 72 (264)
T ss_dssp CCEEEEECCSCCSSST---TGGGCEE---TTEEHHHHHHHHHHHT---------------TC-SEEEEEES---CHHHHH
T ss_pred ceEEEEEcCCCCCCCC---CcceeeE---CCeEHHHHHHHHHHhC---------------CC-CEEEEECC---HHHHHH
Confidence 5899999999999994 4999999 8999999998877531 21 13455552 578888
Q ss_pred HHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCCcc
Q 018126 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (360)
Q Consensus 199 ~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN~L 278 (360)
++++ ||.+ +.+-. ...|.|.|++..++. .+...+.+++.+++.|++|
T Consensus 73 ~~~~---~g~~---v~~~~---------------------~~~~~Gt~~i~~~~~------~l~~~~~d~vlv~~gD~Pl 119 (264)
T 3k8d_A 73 AVEA---AGGE---VCMTR---------------------ADHQSGTERLAEVVE------KCAFSDDTVIVNVQGDEPM 119 (264)
T ss_dssp HHHH---TTCE---EEECC---------------------TTCCSHHHHHHHHHH------HHTCCTTCEEEEECTTCTT
T ss_pred HHHH---cCCE---EEEec---------------------CCCCCCHHHHHHHHH------HhccCCCCEEEEEcCCccc
Confidence 8875 5542 21101 123577777666553 2222356899999999998
Q ss_pred ccccCH-HHHHHHHHcCCceEEEEeecCCCCc-----ccceEEEEccCCCeEEEEecCCC
Q 018126 279 VRVADP-TFLGYFIDKGVSAGAKVVRKAYPQE-----KVGVFVRRGKGGPLTVVEYSELD 332 (360)
Q Consensus 279 ~~~~DP-~flG~~~~~~~~~~~kvv~K~~p~E-----~vGvi~~~~~~g~~~vvEYsel~ 332 (360)
....+- .++-.+...++++++-+++-.+|.+ .+++++ +++|+ ++.+++=|
T Consensus 120 i~~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~~~p~~vkVv~--d~~g~--~l~fsr~~ 175 (264)
T 3k8d_A 120 IPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVL--DAEGY--ALYFSRAT 175 (264)
T ss_dssp CCHHHHHHHHHHHHTSSCSEEEEEEECCSHHHHTCTTSCEEEE--CTTSB--EEEEESSC
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEEEEcCCHHHccCCCceEEEE--CCCCe--EEEEecCC
Confidence 432221 1445555567888766665443322 234432 33564 67777643
No 24
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=98.23 E-value=8.7e-06 Score=80.71 Aligned_cols=142 Identities=20% Similarity=0.228 Sum_probs=85.9
Q ss_pred CCEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHH
Q 018126 118 GKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 197 (360)
Q Consensus 118 gkvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~ 197 (360)
.++.+|+||||.||||+.+.||.++|+ .+|+++++.++++... ++. ..+|.|+. ..+.+.
T Consensus 4 ~~~~aiIlA~G~g~Rl~~~~pK~l~~i---~gkpli~~~l~~l~~~---------------~~~-~iivv~~~-~~~~i~ 63 (456)
T 2v0h_A 4 KALSAVILAAGKGTRMYSDLPKVLHTI---AGKPMVKHVIDTAHQL---------------GSE-NIHLIYGH-GGDLMR 63 (456)
T ss_dssp CCEEEEEECCCCCGGGCSSSCGGGSEE---TTEEHHHHHHHHHHHT---------------TCS-CEEEEECT-THHHHH
T ss_pred CcceEEEECCCCCcccCCCCCccccEE---CCccHHHHHHHHHHhC---------------CCC-cEEEEeCC-CHHHHH
Confidence 368899999999999998789999999 7999999998877631 111 23555544 467788
Q ss_pred HHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhH-hHHHhhCcHHHHHHHCCCeEEEEEcCCC
Q 018126 198 KYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGV-YSALKSSKLLEDMATRGIKYIDCYGVDN 276 (360)
Q Consensus 198 ~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi-~~aL~~sg~l~~l~~~Gi~yi~v~~vDN 276 (360)
+++.+. + +.+..| ..|.|.++. +.++.. +. .-+++++.+.|.
T Consensus 64 ~~~~~~---~-----~~~v~~---------------------~~~~g~~~~~~~~~~~------~~--~~~~vlv~~~D~ 106 (456)
T 2v0h_A 64 THLANE---Q-----VNWVLQ---------------------TEQLGTAHAVQQAAPF------FK--DNENIVVLYGDA 106 (456)
T ss_dssp HHTTTC---C-----CEEEEC---------------------SCCCCHHHHHHHHGGG------CC--TTSEEEEEETTC
T ss_pred HHhhcC---C-----cEEEeC---------------------CCCCCcHHHHHHHHHh------cC--CCCeEEEEcCCc
Confidence 887642 2 222221 113455443 333321 11 147999999999
Q ss_pred ccccccCHHHHHHHHHc--CCceEEEEeecCCCCcccceEEEEccCCC
Q 018126 277 ALVRVADPTFLGYFIDK--GVSAGAKVVRKAYPQEKVGVFVRRGKGGP 322 (360)
Q Consensus 277 ~L~~~~DP~flG~~~~~--~~~~~~kvv~K~~p~E~vGvi~~~~~~g~ 322 (360)
++.. +..+--..+. ..++++-+.+..+| ...|.+... +|+
T Consensus 107 P~i~---~~~i~~l~~~~~~~~~~~~~~~~~~~-~~~g~v~~~--~g~ 148 (456)
T 2v0h_A 107 PLIT---KETLEKLIEAKPENGIALLTVNLDNP-TGYGRIIRE--NGN 148 (456)
T ss_dssp TTCC---HHHHHHHHHHCCTTSEEEEEEECSSC-TTSCEEEEE--TTE
T ss_pred ceeC---HHHHHHHHHHHhcCCEEEEEeecCCC-CccceEEEc--CCc
Confidence 8733 4433333321 24565555554444 345766553 454
No 25
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=98.20 E-value=1.6e-05 Score=79.29 Aligned_cols=151 Identities=17% Similarity=0.184 Sum_probs=92.5
Q ss_pred EEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHHH
Q 018126 120 LAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKY 199 (360)
Q Consensus 120 vavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~~ 199 (360)
-.+|+||||.||||+.+.||.++|+ .+|+++++.++++.+ .++. ..+|.|. +..+.+.++
T Consensus 12 ~~~vIlAaG~g~R~~~~~pK~l~~i---~gkpli~~~l~~l~~---------------~g~~-~iivv~~-~~~~~i~~~ 71 (468)
T 1hm9_A 12 NFAIILAAGKGTRMKSDLPKVLHKV---AGISMLEHVFRSVGA---------------IQPE-KTVTVVG-HKAELVEEV 71 (468)
T ss_dssp EEEEEECCCCCGGGCCSSCGGGSEE---TTEEHHHHHHHHHHT---------------TCCS-EEEEEEC-TTHHHHHHS
T ss_pred CcEEEEcCCCCccCCCCCCcEeeEE---CCccHHHHHHHHHHh---------------cCCC-CEEEEEC-CCHHHHHHH
Confidence 4578999999999998889999999 799999998887652 1211 2344444 446667666
Q ss_pred HhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCCccc
Q 018126 200 FEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALV 279 (360)
Q Consensus 200 f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN~L~ 279 (360)
+.+ .+.+..| ..+.|.++...+. ++.+. ..-+++++.+.|.+|.
T Consensus 72 ~~~---------~i~~v~~---------------------~~~~G~~~sl~~a-----~~~~~-~~~~~vlv~~~D~P~i 115 (468)
T 1hm9_A 72 LAG---------QTEFVTQ---------------------SEQLGTGHAVMMT-----EPILE-GLSGHTLVIAGDTPLI 115 (468)
T ss_dssp SSS---------SSEEEEC---------------------SSCCCHHHHHHTT-----HHHHT-TCCSEEEEEETTCTTC
T ss_pred hCC---------CcEEEeC---------------------CccCChHHHHHHH-----HHHhc-cCCCeEEEEeCCcccc
Confidence 653 1222111 1135555544332 23332 2247899999999864
Q ss_pred cccCH-HHHHHHHHcCCceEEEEeecCCCCcccceEEEEccCCCeEEEEecC
Q 018126 280 RVADP-TFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSE 330 (360)
Q Consensus 280 ~~~DP-~flG~~~~~~~~~~~kvv~K~~p~E~vGvi~~~~~~g~~~vvEYse 330 (360)
...+- .++-.+.+.++++++-+.+..+| ...|.+... .+|+ |+++.|
T Consensus 116 ~~~~i~~l~~~~~~~~~~~~i~~~~~~~~-~~~g~v~~d-~~g~--v~~~~e 163 (468)
T 1hm9_A 116 TGESLKNLIDFHINHKNVATILTAETDNP-FGYGRIVRN-DNAE--VLRIVE 163 (468)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEEECSCC-TTSCEEEEC-TTCC--EEEEEC
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEeccCCC-CceeEEEEC-CCCC--EEEEEE
Confidence 32221 25666667788887666655544 356777653 3453 555544
No 26
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=98.20 E-value=8.3e-06 Score=76.27 Aligned_cols=179 Identities=17% Similarity=0.188 Sum_probs=98.6
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (360)
++.+|+||||.||||+ ||.+.|| .||+++++.++++.+. ++. ..+|-|. ++.+.+
T Consensus 9 ~~~aIIlA~G~stRl~---~K~L~~i---~GkPli~~~l~~l~~~---------------~i~-~VvVvt~---~~~i~~ 63 (256)
T 3tqd_A 9 EFRVIIPARFDSTRLP---GKALVDI---AGKPMIQHVYESAIKS---------------GAE-EVVIATD---DKRIRQ 63 (256)
T ss_dssp CCEEEEECCCC---CT---TGGGCEE---TTEEHHHHHHHHHHHT---------------TCS-EEEEEES---CHHHHH
T ss_pred CceEEEEcCCCCCCCC---CCCeeeE---CCchHHHHHHHHHHhC---------------CCC-EEEEECC---HHHHHH
Confidence 6899999999999996 8999999 8999999999887631 111 2345553 588888
Q ss_pred HHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCCcc
Q 018126 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (360)
Q Consensus 199 ~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN~L 278 (360)
++++ ||.+ +.+ . . ...|.|.+.+..++.. +...+.+++.+++.|++|
T Consensus 64 ~~~~---~g~~---v~~-~----------------~----~~~~~Gt~~i~~a~~~------l~~~~~d~vlv~~gD~Pl 110 (256)
T 3tqd_A 64 VAED---FGAV---VCM-T----------------S----SDHQSGTERIAEAAVA------LGFEDDEIIVCLQGDEPL 110 (256)
T ss_dssp HHHH---TTCE---EEE-C----------------C----TTCCSHHHHHHHHHHH------TTCCTTCEEEEECTTCCC
T ss_pred HHHH---cCCe---EEE-e----------------C----CCCCCcHHHHHHHHHH------hCcCCCCEEEEEeCCccc
Confidence 8875 5642 211 0 0 1235677776666532 211356899999999998
Q ss_pred ccccCH-HHHHHHHHc-CCceEEEEeecCCCC-----cccceEEEEccCCCeEEEEecCCChHH-Hhhcc--cCCCceee
Q 018126 279 VRVADP-TFLGYFIDK-GVSAGAKVVRKAYPQ-----EKVGVFVRRGKGGPLTVVEYSELDPSL-ASAIN--QETGRLRF 348 (360)
Q Consensus 279 ~~~~DP-~flG~~~~~-~~~~~~kvv~K~~p~-----E~vGvi~~~~~~g~~~vvEYsel~~~~-~~~~~--~~~g~l~f 348 (360)
....+- .++..+... ++++++-+++-.++. ..++|++ +++|+ ++.+++=|.-. +.... .....-.-
T Consensus 111 i~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~--d~~g~--~l~fsr~pip~~r~~~~~~~~~~~~~~ 186 (256)
T 3tqd_A 111 IPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTKVVL--NRRNY--ALYFSHAPIPWGRDTFSDKENLQLNGS 186 (256)
T ss_dssp CCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCEEEE--CTTSB--EEEEESSCSSCCTTTTTCGGGCCCSSC
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccEEEE--CCCCE--EeEEecCCCCCCCcccccccccccCCc
Confidence 332211 134444443 556655454432211 1245544 34564 56666633211 10000 00000012
Q ss_pred eccceeeeeec
Q 018126 349 CWSNVCTFAST 359 (360)
Q Consensus 349 ~~gni~~h~f~ 359 (360)
+..||++++|+
T Consensus 187 ~~~~~GiY~y~ 197 (256)
T 3tqd_A 187 HYRHVGIYAYR 197 (256)
T ss_dssp CEEEEEEEEEE
T ss_pred ceEEEEEEEcC
Confidence 35699999986
No 27
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=98.19 E-value=1.7e-05 Score=78.74 Aligned_cols=142 Identities=21% Similarity=0.248 Sum_probs=88.3
Q ss_pred CCEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHH
Q 018126 118 GKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 197 (360)
Q Consensus 118 gkvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~ 197 (360)
.++.+|+||||.||||+.+.||.++|+ .+|+++++.++++.+. ++ -..+|.|.. .++.+.
T Consensus 7 ~~~~aiIlA~G~g~Rl~~~~pK~l~~i---~g~pli~~~l~~l~~~---------------~~-~~i~vv~~~-~~~~i~ 66 (459)
T 4fce_A 7 SSMSVVILAAGKGTRMYSDLPKVLHPL---AGKPMVQHVIDAAMKL---------------GA-QHVHLVYGH-GGELLK 66 (459)
T ss_dssp CCEEEEEEECCCCGGGCCSSCGGGSEE---TTEEHHHHHHHHHHHH---------------TC-SCEEEEESS-CHHHHH
T ss_pred CcceEEEECCCCCccCCCCCCcccCee---CCeeHHHHHHHHHHhC---------------CC-CcEEEEeCC-CHHHHH
Confidence 379999999999999998899999999 7999999999987642 11 134555554 478888
Q ss_pred HHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChh-HhHHHhhCcHHHHHHHCCCeEEEEEcCCC
Q 018126 198 KYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGG-VYSALKSSKLLEDMATRGIKYIDCYGVDN 276 (360)
Q Consensus 198 ~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGg-i~~aL~~sg~l~~l~~~Gi~yi~v~~vDN 276 (360)
+++++. + +.+..| ..+.|.++ ++.++.. + ..-+++.+.+.|.
T Consensus 67 ~~~~~~---~-----~~~v~~---------------------~~~~g~~~~i~~~~~~------~--~~~~~~lv~~~D~ 109 (459)
T 4fce_A 67 KTLADP---S-----LNWVLQ---------------------AEQLGTGHAMQQAAPH------F--ADDEDILMLYGDV 109 (459)
T ss_dssp HHC-------------CEEEC---------------------SSCCCHHHHHHHHGGG------S--CTTSEEEEEETTC
T ss_pred HHhccC---C-----cEEEeC---------------------CCCCCcHHHHHHHHHh------c--CCCCcEEEEeCCc
Confidence 888642 1 222211 11345544 4444432 1 1347999999999
Q ss_pred ccccccCHHHHHHHHH--cCCceEEEEeecCCCCcccceEEEEccCCC
Q 018126 277 ALVRVADPTFLGYFID--KGVSAGAKVVRKAYPQEKVGVFVRRGKGGP 322 (360)
Q Consensus 277 ~L~~~~DP~flG~~~~--~~~~~~~kvv~K~~p~E~vGvi~~~~~~g~ 322 (360)
++ .++..+--..+ ...++++-+++..+| .+.|.+... +|+
T Consensus 110 P~---i~~~~i~~l~~~~~~~~~~~~~~~~~~~-~~~g~v~~~--~g~ 151 (459)
T 4fce_A 110 PL---ISVDTLQRLLAAKPEGGIGLLTVKLDNP-SGYGRIVRE--NGD 151 (459)
T ss_dssp TT---CCHHHHHHHHHHCCTTSEEEEEEECSCC-TTSCEEEEE--TTE
T ss_pred cc---CCHHHHHHHHHHHhhCCEEEEEEecCCC-CcccEEEeC--CCc
Confidence 87 34554444443 235565555555554 456777664 453
No 28
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=98.15 E-value=1.2e-05 Score=72.62 Aligned_cols=113 Identities=21% Similarity=0.280 Sum_probs=73.1
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (360)
++.+|+||||.||||+ ||.+.|+ .||+++++.++++... + -..+|.|.. +.+.+
T Consensus 2 ~~~aiIlA~G~g~R~~---~K~l~~i---~g~pli~~~l~~~~~~----------------~-~~i~v~~~~---~~i~~ 55 (234)
T 2y6p_A 2 RRAVIIPARLGSTRLK---EKPLKNL---LGKPLIRWVVEGLVKT----------------G-ERVILATDS---ERVKE 55 (234)
T ss_dssp CEEEEEECCSCCTTTT---TGGGCEE---TTEEHHHHHHHHHHTT----------------T-SCEEEEESC---HHHHH
T ss_pred ceEEEEEcCCCCCCCC---CCcceeE---CCEEHHHHHHHHHHHh----------------C-CEEEEECCh---HHHHH
Confidence 4788999999999998 9999999 7999999988877531 1 124555543 67788
Q ss_pred HHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCCcc
Q 018126 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (360)
Q Consensus 199 ~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN~L 278 (360)
++++. . .+ +. . + ...+.|.|+++.++... +-+++.+.+.|.++
T Consensus 56 ~~~~~----~---~~--~~-------~---------~---~~~~~g~~~~~~~~~~~---------~~~~vlv~~~D~P~ 98 (234)
T 2y6p_A 56 VVEDL----C---EV--FL-------T---------P---SDLPSGSDRVLYVVRDL---------DVDLIINYQGDEPF 98 (234)
T ss_dssp HHTTT----S---EE--EE-------C---------C---TTCCSHHHHHHHHHTTC---------CCSEEEECCTTCCC
T ss_pred HHHhc----e---EE--EE-------C---------C---cccccchHHHHHHHHhC---------CCCEEEEecCCcCc
Confidence 87641 1 12 11 0 0 11246777776554321 35799999999987
Q ss_pred ccccC-HHHHHHHHHcC
Q 018126 279 VRVAD-PTFLGYFIDKG 294 (360)
Q Consensus 279 ~~~~D-P~flG~~~~~~ 294 (360)
....+ -.++-.+...+
T Consensus 99 ~~~~~i~~l~~~~~~~~ 115 (234)
T 2y6p_A 99 VYEEDIKLIFRELEKGE 115 (234)
T ss_dssp CCHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHhCC
Confidence 43221 12455555555
No 29
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=98.15 E-value=2.8e-05 Score=73.37 Aligned_cols=143 Identities=14% Similarity=0.112 Sum_probs=88.5
Q ss_pred CEEEEEecCCCccccCC---CCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHH
Q 018126 119 KLAVLLLSGGQGTRLGS---SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDA 195 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~---~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~ 195 (360)
.+.+|+||||.||||+. +.||.++|| .|++++++.++++.. .++. ..+|.|+ +..+.
T Consensus 8 ~~~avIlAaG~gtRl~plt~~~pK~ll~i---~gkpli~~~l~~l~~---------------~gi~-~i~vv~~-~~~~~ 67 (302)
T 2e3d_A 8 VKKAVIPVAGLGTRMLPATKAIPKEMLPL---VDKPLIQYVVNECIA---------------AGIT-EIVLVTH-SSKNS 67 (302)
T ss_dssp CCEEEEECCSCCGGGTTTTSSSCGGGCEE---TTEEHHHHHHHHHHH---------------TTCC-EEEEEEC-GGGHH
T ss_pred ccEEEEECCcCcccCCccccCCCceeeEE---CCeEHHHHHHHHHHH---------------CCCC-EEEEEeC-CCHHH
Confidence 46789999999999984 679999999 689999999887753 1211 2345554 45788
Q ss_pred HHHHHhhcCC----------------------CCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHh
Q 018126 196 TRKYFEGHKY----------------------FGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALK 253 (360)
Q Consensus 196 t~~~f~~~~~----------------------FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~ 253 (360)
+.++|.+... +|. +|.+.. ...|.|.|+......
T Consensus 68 i~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~---~i~~~~---------------------~~~~~Gt~~al~~a~ 123 (302)
T 2e3d_A 68 IENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHV---TIMQVR---------------------QGLAKGLGHAVLCAH 123 (302)
T ss_dssp HHHHHSCCHHHHHHHC----CHHHHHHHHTSCTTC---EEEEEE---------------------CSSCCCHHHHHHHTH
T ss_pred HHHHHhcchhhhhhhhhccchhhhhhhhhccccCc---ceEEee---------------------CCccCCHHHHHHHHH
Confidence 9999874210 111 111111 123567777554332
Q ss_pred hCcHHHHHHHCCCeEEEEEcCCCcccc----cc---C-HHHHHHHHHcCCceEEEEeecCCCCcccceEEE
Q 018126 254 SSKLLEDMATRGIKYIDCYGVDNALVR----VA---D-PTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVR 316 (360)
Q Consensus 254 ~sg~l~~l~~~Gi~yi~v~~vDN~L~~----~~---D-P~flG~~~~~~~~~~~kvv~K~~p~E~vGvi~~ 316 (360)
+.+ . -+++.+.+.|+++ . .. | -.++-++...++ +++-+.+. .+....|++..
T Consensus 124 -----~~~-~--~~~~lv~~~D~~~-~~~~~~~~~~~l~~l~~~~~~~~~-~~i~~~~~-~~~~~yg~v~~ 183 (302)
T 2e3d_A 124 -----PVV-G--DEPVAVILPDVIL-DEYESDLSQDNLAEMIRRFDETGH-SQIMVEPV-ADVTAYGVVDC 183 (302)
T ss_dssp -----HHH-C--SSCEEEECTTEEE-CTTSSCTTTSTHHHHHHHHHHHCC-EEEEEEEC-SCGGGSEEEEC
T ss_pred -----HHc-C--CCcEEEEcCCccc-cCccccchHHHHHHHHHHHHhcCC-cEEEEEEc-cCCCCccEEEe
Confidence 222 1 2678999999996 4 22 2 346777777676 44444443 44566787753
No 30
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=98.12 E-value=3.9e-05 Score=69.09 Aligned_cols=131 Identities=15% Similarity=0.125 Sum_probs=77.0
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (360)
++.+|+||||.||||+ ||.+.|+ .||+++++.++++.+. +..-.++|.|. ++.+.+
T Consensus 4 ~~~aiIlA~G~g~R~~---~K~l~~i---~gkpll~~~l~~~~~~---------------~~~~~ivvv~~---~~~i~~ 59 (228)
T 1ezi_A 4 QNIAVILARQNSKGLP---LKNLRKM---NGISLLGHTINAAISS---------------KCFDRIIVSTD---GGLIAE 59 (228)
T ss_dssp EEEEEEECCSSCSSST---TTTTCEE---TTEEHHHHHHHHHHHH---------------CCCSEEEEEES---CHHHHH
T ss_pred ceEEEEecCCCCCCCC---Cccccee---CCcCHHHHHHHHHHhC---------------CCCCEEEEECC---CHHHHH
Confidence 5789999999999998 9999999 6999999998877631 11013455553 466778
Q ss_pred HHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCCcc
Q 018126 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (360)
Q Consensus 199 ~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN~L 278 (360)
++++ +|.. + +.. +..+ .+.|.| ...++.. .++.+ ..+.+++.+++.|+++
T Consensus 60 ~~~~---~~~~---~--~~~----------------~~~~--~~~~~g-~~~sv~~--~l~~~-~~~~d~vlv~~~D~P~ 109 (228)
T 1ezi_A 60 EAKN---FGVE---V--VLR----------------PAEL--ASDTAS-SISGVIH--ALETI-GSNSGTVTLLQPTSPL 109 (228)
T ss_dssp HHHH---TTCE---E--EEC----------------CC--------CH-HHHHHHH--HHHHH-TCCSEEEEECCTTCTT
T ss_pred HHHH---cCCE---E--EeC----------------chHH--cCCCCC-hHHHHHH--HHHHh-CCCCCEEEEEcCCCCc
Confidence 8865 3431 2 221 1101 112222 2222221 12333 2346899999999997
Q ss_pred ccccCHHHHHHHH----HcCCceEEEEeecCC
Q 018126 279 VRVADPTFLGYFI----DKGVSAGAKVVRKAY 306 (360)
Q Consensus 279 ~~~~DP~flG~~~----~~~~~~~~kvv~K~~ 306 (360)
.+|..+--.+ ..++++.+-+++..+
T Consensus 110 ---~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 138 (228)
T 1ezi_A 110 ---RTGAHIREAFSLFDEKIKGSVVSACPMEH 138 (228)
T ss_dssp ---CCHHHHHHHHTTCCTTTCCCEEEEEECSS
T ss_pred ---CCHHHHHHHHHHHHhcCCCEEEEEEecCC
Confidence 3454444333 345667666665543
No 31
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=98.11 E-value=1.9e-05 Score=74.40 Aligned_cols=65 Identities=17% Similarity=0.199 Sum_probs=48.9
Q ss_pred CCEEEEEecCCCccccCC---CCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchH
Q 018126 118 GKLAVLLLSGGQGTRLGS---SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDD 194 (360)
Q Consensus 118 gkvavvlLAGG~GTRLg~---~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~ 194 (360)
..+.+|+||||.||||+. ..||.++|+ .||+++++.++++.. .++. ..+|.| .+..+
T Consensus 13 ~~~~avIlAaG~gtRl~plt~~~pK~ll~i---~gkpli~~~l~~l~~---------------~g~~-~i~vv~-~~~~~ 72 (297)
T 2ux8_A 13 PLRKAVFPVAGLGTRFLPATKAMPKEMLPV---VDRPLIQYAVDEAVE---------------AGIE-QMIFVT-GRGKS 72 (297)
T ss_dssp CCCEEEEEECCCCGGGTTTTSSSCGGGCEE---TTEEHHHHHHHHHHH---------------TTCC-EEEEEE-CTTCH
T ss_pred CccEEEEECCCCccccCccccCCCceeeeE---CCeEHHHHHHHHHHh---------------CCCC-EEEEEe-CCCHH
Confidence 357889999999999974 679999999 689999999887753 1211 234445 44578
Q ss_pred HHHHHHhh
Q 018126 195 ATRKYFEG 202 (360)
Q Consensus 195 ~t~~~f~~ 202 (360)
.+.++|.+
T Consensus 73 ~i~~~~~~ 80 (297)
T 2ux8_A 73 ALEDHFDI 80 (297)
T ss_dssp HHHHHTSC
T ss_pred HHHHHHhh
Confidence 89988864
No 32
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=98.09 E-value=4.6e-05 Score=69.98 Aligned_cols=66 Identities=21% Similarity=0.334 Sum_probs=42.4
Q ss_pred CEEEEEecCCCccccCC-CCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHH
Q 018126 119 KLAVLLLSGGQGTRLGS-SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 197 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~-~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~ 197 (360)
++.+|+||||.|||||. +.||.+.|+ .||+++++.++++.+ .+..-..+|.|+....+.+.
T Consensus 3 ~~~aIIlAaG~g~Rm~~~~~pK~l~~l---~Gkpll~~~l~~~~~---------------~~~~~~ivvv~~~~~~~~~~ 64 (246)
T 3f1c_A 3 LIYAQILAGGKGTRMGNVSMPKQFLPL---NGKPIIVHTVEKFIL---------------NTRFDKILISSPKEWMNHAE 64 (246)
T ss_dssp CEEEEEECC-----C-CSSCCGGGSEE---TTEEHHHHHHHHHHT---------------CTTCSEEEEEECGGGHHHHH
T ss_pred ccEEEEECCccccccCCCCCCCeEEEE---CCeeHHHHHHHHHHc---------------CCCCCEEEEEeCHHHHHHHH
Confidence 57899999999999998 779999999 799999998887652 11112355666655444566
Q ss_pred HHHhh
Q 018126 198 KYFEG 202 (360)
Q Consensus 198 ~~f~~ 202 (360)
+.+++
T Consensus 65 ~~~~~ 69 (246)
T 3f1c_A 65 DNIKK 69 (246)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66665
No 33
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.08 E-value=1.3e-05 Score=76.75 Aligned_cols=63 Identities=22% Similarity=0.207 Sum_probs=46.9
Q ss_pred EEEEEecCCCccccCC---CCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHH
Q 018126 120 LAVLLLSGGQGTRLGS---SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDAT 196 (360)
Q Consensus 120 vavvlLAGG~GTRLg~---~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t 196 (360)
+.+|+||||.||||+. +.||.+.|| .|++++++.++++.. .++. ..+|.| .+..+.+
T Consensus 13 ~~aVIlAaG~gtRl~plt~~~pK~ll~i---~gkpli~~~l~~l~~---------------~gi~-~iivv~-~~~~~~i 72 (323)
T 2pa4_A 13 KTVVVPAAGLGTRFLPATKTVPKELLPV---VDTPGIELIAAEAAE---------------LGAT-RLAIIT-APNKAGV 72 (323)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEE---TTEEHHHHHHHHHHH---------------TTCC-EEEEEE-CTTCHHH
T ss_pred eEEEEECCCCccccCccccCCCceeeeE---CCEEHHHHHHHHHHh---------------CCCC-EEEEEe-cCcHHHH
Confidence 6789999999999974 679999999 589999999887753 1211 234444 4456788
Q ss_pred HHHHhh
Q 018126 197 RKYFEG 202 (360)
Q Consensus 197 ~~~f~~ 202 (360)
.++|..
T Consensus 73 ~~~~~~ 78 (323)
T 2pa4_A 73 LAHFER 78 (323)
T ss_dssp HHTTSC
T ss_pred HHHHhc
Confidence 887753
No 34
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=98.07 E-value=1.8e-05 Score=71.89 Aligned_cols=126 Identities=17% Similarity=0.193 Sum_probs=79.8
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (360)
++.+|+||||.||||+ ||.+.|+ .||+++++.++++.+ .+..-.++|.|.. +.+.+
T Consensus 2 ~~~aiIlA~G~~~R~~---~K~l~~i---~g~pli~~~i~~~~~---------------~~~~~~ivvv~~~---~~i~~ 57 (245)
T 1h7e_A 2 KAVIVIPARYGSSRLP---GKPLLDI---VGKPMIQHVYERALQ---------------VAGVAEVWVATDD---PRVEQ 57 (245)
T ss_dssp CEEEEEECCSCCSSST---TGGGCEE---TTEEHHHHHHHHHHT---------------CTTCCEEEEEESC---HHHHH
T ss_pred CeEEEEEcCCcCCCCC---CCccccc---CCchHHHHHHHHHHh---------------CCCCCeEEEECCc---HHHHH
Confidence 5788999999999996 9999999 799999998887652 1211145666643 78888
Q ss_pred HHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCCcc
Q 018126 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (360)
Q Consensus 199 ~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN~L 278 (360)
++++ +|+ .++. + + ...+.|.++++.++.. + +-+++.+.+.|.++
T Consensus 58 ~~~~---~~~-----~~~~-------~---------~---~~~~~g~~~~~~~~~~------~---~~~~~lv~~~D~P~ 101 (245)
T 1h7e_A 58 AVQA---FGG-----KAIM-------T---------R---NDHESGTDRLVEVMHK------V---EADIYINLQGDEPM 101 (245)
T ss_dssp HHHH---TTC-----EEEE-------C---------C---SCCSSHHHHHHHHHHH------S---CCSEEEECCTTCTT
T ss_pred HHHH---cCC-----eEEe-------C---------C---CccCCcHHHHHHHHHh------C---CCCEEEEEcCCcCc
Confidence 8875 243 1111 0 0 0123566666655532 1 35789999999997
Q ss_pred ccccC-HHHHHHHHHc-CCceEEEEeec
Q 018126 279 VRVAD-PTFLGYFIDK-GVSAGAKVVRK 304 (360)
Q Consensus 279 ~~~~D-P~flG~~~~~-~~~~~~kvv~K 304 (360)
....+ -.++-.+... ++++++-+.+.
T Consensus 102 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 129 (245)
T 1h7e_A 102 IRPRDVETLLQGMRDDPALPVATLCHAI 129 (245)
T ss_dssp CCHHHHHHHHHHHHHCTTCCEEEEEEEE
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeecC
Confidence 33221 1245555555 67775545443
No 35
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=98.02 E-value=4.4e-05 Score=69.19 Aligned_cols=129 Identities=15% Similarity=0.191 Sum_probs=78.0
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (360)
++.+|+||||.||||+ +|.+.|+ .||+++++.++++.+. +..-.+++-| .++.+.+
T Consensus 3 ~~~aiIlA~G~s~R~~---~K~l~~i---~Gkpli~~~i~~~~~~---------------~~~~~ivv~~---~~~~i~~ 58 (229)
T 1qwj_A 3 HLAALVLARGGSKGIP---LKNIKRL---AGVPLIGWVLRAALDA---------------GVFQSVWVST---DHDEIEN 58 (229)
T ss_dssp CEEEEEECCSCCSSSS---CTTTSEE---TTEEHHHHHHHHHHHH---------------TCCSEEEEEE---SCHHHHH
T ss_pred cEEEEEEcCCCCCCCC---CcccceE---CCEEHHHHHHHHHHhC---------------CCcCEEEEEC---ChHHHHH
Confidence 6889999999999995 5999999 7999999999877642 1101345555 3577888
Q ss_pred HHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcc-cccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCCc
Q 018126 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKV-AKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNA 277 (360)
Q Consensus 199 ~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i-~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN~ 277 (360)
++++ +|+. ++.+. ..+ ...+.|.+.+..++.. + .+.+++.+.+.|++
T Consensus 59 ~~~~---~g~~-----~~~~~----------------~~~~~~~~~~~~~v~~al~~------~--~~~d~vlv~~~D~P 106 (229)
T 1qwj_A 59 VAKQ---FGAQ-----VHRRS----------------SETSKDSSTSLDAIVEFLNY------H--NEVDIVGNIQATSP 106 (229)
T ss_dssp HHHH---TTCE-----EEECC----------------GGGSSTTCCHHHHHHHHHTT------C--TTCSEEEEECTTCT
T ss_pred HHHH---cCCE-----EEeCh----------------hhhcCCCCcHHHHHHHHHHh------c--CCCCEEEEecCCCC
Confidence 8875 3432 22211 000 0112233344444432 1 24688999999999
Q ss_pred cccccCH-HHHHHHHHcCCceEEEEee
Q 018126 278 LVRVADP-TFLGYFIDKGVSAGAKVVR 303 (360)
Q Consensus 278 L~~~~DP-~flG~~~~~~~~~~~kvv~ 303 (360)
|....+- .++..+...++++.+.+.+
T Consensus 107 li~~~~i~~l~~~~~~~~~~~~~~~~~ 133 (229)
T 1qwj_A 107 CLHPTDLQKVAEMIREEGYDSVFSVVR 133 (229)
T ss_dssp TCCHHHHHHHHHHHHSSCCSEEEEEEE
T ss_pred cCCHHHHHHHHHHHHhCCCCEEEEEee
Confidence 8432211 2455555567776555543
No 36
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=98.01 E-value=5.6e-05 Score=65.99 Aligned_cols=103 Identities=19% Similarity=0.123 Sum_probs=67.1
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (360)
++.+|+||||.||||| .||.+.|+ .|++++++.++++.. .++ -+.+|.|+ +..+.+.+
T Consensus 5 ~~~~iIlA~G~~~R~g--~~K~l~~~---~g~pli~~~l~~l~~---------------~~~-~~i~vv~~-~~~~~~~~ 62 (199)
T 2waw_A 5 RVTGVVLAAGYSRRLG--TPKQLLPL---GDTTLLGATLAMARR---------------CPF-DQLIVTLG-GAADEVLE 62 (199)
T ss_dssp CEEEEEEESSCCTTTT--SCGGGCEE---TTEEHHHHHHHHHHT---------------SSC-SEEEEEEC-TTHHHHHH
T ss_pred ceEEEEECCCCCCCCC--CCEEeCEe---CccCHHHHHHHHHHh---------------CCC-CcEEEEeC-CCHHHHHH
Confidence 5889999999999998 69999999 789999998887652 121 13455554 44566777
Q ss_pred HHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCC-ChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCCc
Q 018126 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDG-NGGVYSALKSSKLLEDMATRGIKYIDCYGVDNA 277 (360)
Q Consensus 199 ~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~G-hGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN~ 277 (360)
++++ +|+ .++. + + ..+.| .++++.++... ..+.+++.+...|.+
T Consensus 63 ~~~~---~~~-----~~~~-------~-~------------~~~~g~~~~i~~al~~~-------~~~~~~vlv~~~D~P 107 (199)
T 2waw_A 63 KVEL---DGL-----DIVL-------V-D------------DAGLGCSSSLKSALTWV-------DPTAEGIVLMLGDQP 107 (199)
T ss_dssp HSCC---TTS-----EEEE-------C-C------------CCCTTCCCHHHHHHHTS-------CTTCSEEEEEETTCT
T ss_pred Hhcc---CCC-----EEEE-------C-C------------CcccCHHHHHHHHHHhh-------hccCCeEEEEeCCcc
Confidence 7653 232 1111 0 0 01235 34566665432 125689999999999
Q ss_pred c
Q 018126 278 L 278 (360)
Q Consensus 278 L 278 (360)
+
T Consensus 108 ~ 108 (199)
T 2waw_A 108 G 108 (199)
T ss_dssp T
T ss_pred c
Confidence 7
No 37
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=97.96 E-value=4.4e-05 Score=73.92 Aligned_cols=160 Identities=17% Similarity=0.164 Sum_probs=91.7
Q ss_pred EEEEEecCCCccccC----CCCCCCceeecCCCC-CccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchH
Q 018126 120 LAVLLLSGGQGTRLG----SSDPKGCVNIGLPSG-KSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDD 194 (360)
Q Consensus 120 vavvlLAGG~GTRLg----~~~pKg~~~i~l~s~-ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~ 194 (360)
+.+|+||||.||||+ ...||.++|+ .+ +|++|+.++++..+ .++. ..+|.|.....+
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l---~g~~pli~~~l~~l~~~--------------~~~~-~iivvt~~~~~~ 63 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKL---FGNKSLMRWTFERVLEE--------------MDPK-DVIVVTHKDYVE 63 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCC---BTTBCHHHHHHHHHHTT--------------CCGG-GEEEEEEGGGHH
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEEC---CCCCcHHHHHHHHHhcc--------------CCCC-cEEEEcChHHHH
Confidence 357899999999997 5579999888 56 99999998877531 0111 346666654456
Q ss_pred HHHHHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcC
Q 018126 195 ATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGV 274 (360)
Q Consensus 195 ~t~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~v 274 (360)
.+.+++.+.. ..++ +. + ..|-|.|+....... .+ ..-+++.+.+.
T Consensus 64 ~i~~~l~~~~-----~~~i--i~---------------e------~~~~gta~ai~~a~~-----~~--~~~~~~lvl~~ 108 (336)
T 2x65_A 64 RTKKELPELP-----DENI--IA---------------E------PMKKNTAPACFIGTK-----LA--DDDEPVLVLPA 108 (336)
T ss_dssp HHHHHCTTSC-----GGGE--EE---------------E------SSCCCHHHHHHHHHT-----TS--CTTCEEEEEET
T ss_pred HHHHHhhccc-----cceE--Ee---------------C------CCCCCcHHHHHHHHH-----hh--CCCCEEEEEcC
Confidence 6777776421 0111 11 1 124566665543322 11 12478999999
Q ss_pred CCccccccC-----HHHHHHHHHcCCceEEEEeecCCCCcccceEEEEcc--CCCeEEEEecCCCh
Q 018126 275 DNALVRVAD-----PTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGK--GGPLTVVEYSELDP 333 (360)
Q Consensus 275 DN~L~~~~D-----P~flG~~~~~~~~~~~kvv~K~~p~E~vGvi~~~~~--~g~~~vvEYsel~~ 333 (360)
|.++....+ -.++-++.+.+..+++-+.+ +.|....|.+..... ++...|..+.|=|.
T Consensus 109 D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i~p-~~~~~~yG~I~~~~~~~~~~~~V~~f~EKp~ 173 (336)
T 2x65_A 109 DHRIPDTKKFWKTVKKALDALEKYDGLFTFGIVP-TRPETGYGYIEIGEELEEGVHKVAQFREKPD 173 (336)
T ss_dssp TCBCCCHHHHHHHHHHHHHHHHHHCSEEEEEECC-CSCCSSSEEEEEEEEEETTEEEEEEEEESCC
T ss_pred CceeccHHHHHHHHHHHHHHHHhcCCeEEEEeec-ccCCCCceEEEECCccCCCccEEEEEEECCC
Confidence 998632111 11233344546666555544 456677898865310 11135666666454
No 38
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=97.96 E-value=0.0001 Score=65.65 Aligned_cols=41 Identities=22% Similarity=0.432 Sum_probs=36.3
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILC 162 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~ 162 (360)
++.+|+||||.||||+...||.+.|+ .|++++++.++++.+
T Consensus 2 ~~~~vIlA~G~g~R~~~~~~K~l~~~---~g~pli~~~l~~l~~ 42 (223)
T 2xwl_A 2 ATVAVVPAAGSGERLRAGRPKAFVTL---GGTPLLEHALSGLRA 42 (223)
T ss_dssp CEEEEEECCCCCGGGTSSSCGGGSEE---TTEEHHHHHHHHHHH
T ss_pred ceEEEEECCccCcccCCCCCCeeeEE---CCeEHHHHHHHHHhc
Confidence 57899999999999997789999999 699999998887763
No 39
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=97.90 E-value=0.00023 Score=65.40 Aligned_cols=131 Identities=18% Similarity=0.301 Sum_probs=80.0
Q ss_pred CCEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHH
Q 018126 118 GKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 197 (360)
Q Consensus 118 gkvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~ 197 (360)
|++++|+||||.|||||.+.||.+.++ .||+++++.++.+.+. ..+ -..+|.|+....+.+.
T Consensus 6 ~~~~aIIlAaG~g~Rmg~~~~K~l~~l---~Gkpll~~~l~~~~~~--------------~~~-~~ivVv~~~~~~~~~~ 67 (231)
T 3q80_A 6 GEVVAIVPAAGSGERLAVGVPKAFYQL---DGQTLIERAVDGLLDS--------------GVV-DTVVVAVPADRTDEAR 67 (231)
T ss_dssp CCEEEEEECCCCCTTTCSSSCGGGCEE---TTEEHHHHHHHHHHHT--------------SCC-CEEEEEECGGGHHHHH
T ss_pred CceEEEEECCCCCccCCCCCCceEEEE---CCeEHHHHHHHHHHhC--------------CCC-CeEEEECChHHHHHHH
Confidence 468999999999999999899999999 7999999998876531 011 1355666655446666
Q ss_pred HHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCCc
Q 018126 198 KYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNA 277 (360)
Q Consensus 198 ~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN~ 277 (360)
+++.. .+.+.. .|. ....+++.+|... .. ..+.+++.++..|-+
T Consensus 68 ~~~~~---------~v~~v~---------gg~-------------~r~~sv~~gl~~~---~~--~~~~d~Vlv~~~d~P 111 (231)
T 3q80_A 68 QILGH---------RAMIVA---------GGS-------------NRTDTVNLALTVL---SG--TAEPEFVLVHDAARA 111 (231)
T ss_dssp HHHGG---------GCEEEE---------CCS-------------SHHHHHHHHHGGG---C-----CCSEEEECCTTCT
T ss_pred HHhcC---------CeEEEc---------CCC-------------chHHHHHHHHHHh---hh--cCCCCEEEEEcCCcC
Confidence 66643 122111 110 0013455555421 11 013579999999999
Q ss_pred cccccCHHHHHHHHH---cCCceEEEEeecC
Q 018126 278 LVRVADPTFLGYFID---KGVSAGAKVVRKA 305 (360)
Q Consensus 278 L~~~~DP~flG~~~~---~~~~~~~kvv~K~ 305 (360)
| ..|..|--+++ .+.+.++-+++-.
T Consensus 112 l---i~~~~i~~li~~~~~~~~~~i~~~p~~ 139 (231)
T 3q80_A 112 L---TPPALVARVVEALRDGYAAVVPVLPLS 139 (231)
T ss_dssp T---CCHHHHHHHHHHHHTTCSEEEEEECCS
T ss_pred C---CCHHHHHHHHHHHhhcCCeEEEEEecc
Confidence 8 45665554443 2255555555433
No 40
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=97.89 E-value=0.00018 Score=66.43 Aligned_cols=130 Identities=18% Similarity=0.163 Sum_probs=80.0
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (360)
++.+|+||||.||||+ +|.+.|+ .||+++++.++++... +. -.++|.|.. +.+.+
T Consensus 2 ~~~aiIlA~G~g~R~~---~K~l~~~---~gkpli~~~l~~l~~~---------------~~-~~ivvv~~~---~~i~~ 56 (262)
T 1vic_A 2 SFTVIIPARFASSRLP---GKPLADI---KGKPMIQHVFEKALQS---------------GA-SRVIIATDN---ENVAD 56 (262)
T ss_dssp CCEEEEECCCCCSSST---TGGGCEE---TTEEHHHHHHHHHHHT---------------TC-SEEEEEESC---HHHHH
T ss_pred CcEEEEEcCCCCCCCC---CCccccC---CCeEHHHHHHHHHHhC---------------CC-ceEEEECCc---HHHHH
Confidence 4778999999999996 5999999 6999999988877531 22 234555542 66788
Q ss_pred HHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCCcc
Q 018126 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (360)
Q Consensus 199 ~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN~L 278 (360)
++++ +|+ .++.+ + ...|.|.|.+..+ ++.+...+-+++.+.+.|.++
T Consensus 57 ~~~~---~~~-----~~~~~----------------~---~~~~~g~~~~~~~------~~~l~~~~~~~vlv~~~D~P~ 103 (262)
T 1vic_A 57 VAKS---FGA-----EVCMT----------------S---VNHNSGTERLAEV------VEKLAIPDNEIIVNIQGDEPL 103 (262)
T ss_dssp HHHH---TTC-----EEEEC----------------C---CSSCCHHHHHHHH------HHHTTCCTTCEEEECCTTCTT
T ss_pred HHHh---cCC-----EEEEC----------------C---ccccCChHHHHHH------HHHhccCCCCEEEEEeCCcCc
Confidence 8865 343 12211 0 0123455533322 222322245899999999987
Q ss_pred ccccC-HHHHHHHHHcCCceEEEEeecCC
Q 018126 279 VRVAD-PTFLGYFIDKGVSAGAKVVRKAY 306 (360)
Q Consensus 279 ~~~~D-P~flG~~~~~~~~~~~kvv~K~~ 306 (360)
....+ -.++-.+...++++++-+++..+
T Consensus 104 i~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 132 (262)
T 1vic_A 104 IPPVIVRQVADNLAKFNVNMASLAVKIHD 132 (262)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEEECCC
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEEEecCC
Confidence 43222 12555666667787666665443
No 41
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=97.88 E-value=4.7e-05 Score=68.65 Aligned_cols=40 Identities=30% Similarity=0.576 Sum_probs=36.1
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~ 161 (360)
-+.+|+||||.|||||.+.||.+.|+ .||+++++.++++.
T Consensus 13 ~~~aiILAaG~s~Rm~~~~~K~l~~i---~Gkpli~~~i~~l~ 52 (234)
T 1vpa_A 13 MNVAILLAAGKGERMSENVPKQFLEI---EGRMLFEYPLSTFL 52 (234)
T ss_dssp CEEEEEEECCCCGGGCCSSCGGGCEE---TTEETTHHHHHHHH
T ss_pred cCeEEEEcCcchhhcCCCCCceEEEE---CCeEHHHHHHHHHH
Confidence 47889999999999997779999999 79999999888775
No 42
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=97.88 E-value=5.8e-05 Score=67.81 Aligned_cols=41 Identities=27% Similarity=0.410 Sum_probs=27.6
Q ss_pred CCEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHH
Q 018126 118 GKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (360)
Q Consensus 118 gkvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~ 161 (360)
.++.+|+||||.|||||.+.||.+.|+ .||+++++.++++.
T Consensus 5 ~~~~aiIlA~G~g~R~~~~~~K~l~~~---~gkpli~~~l~~l~ 45 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFGADKPKQYVEI---GSKTVLEHVLGIFE 45 (231)
T ss_dssp CCEEEEEECC----------CCSCCEE---TTEEHHHHHHHHHH
T ss_pred CceEEEEEcccccccCCCCCCceEeEE---CCeEHHHHHHHHHH
Confidence 468999999999999997779999999 69999999888765
No 43
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=97.86 E-value=8.2e-05 Score=66.80 Aligned_cols=65 Identities=17% Similarity=0.229 Sum_probs=39.2
Q ss_pred EEEEEecCCCccccCC-CCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHH
Q 018126 120 LAVLLLSGGQGTRLGS-SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (360)
Q Consensus 120 vavvlLAGG~GTRLg~-~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (360)
+.+|+||||.|||||. +.||.+.|+ .||+++++.++++.+. .++ -..+|.|+....+.+.+
T Consensus 3 ~~~iIlA~G~g~R~~~~~~~K~l~~i---~g~pli~~~l~~l~~~--------------~~~-~~i~vv~~~~~~~~~~~ 64 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGISNLPKQFLEL---GDRPILIHTIEKFVLE--------------PSI-EKIVVGVHGDWVSHAED 64 (236)
T ss_dssp EEEEEEEC-----------CGGGSEE---TTEEHHHHHHHHHHTC--------------TTC-CCEEEEECGGGHHHHHH
T ss_pred eEEEEeCCccccccCCCCCCCeeeee---CCccHHHHHHHHHHcC--------------CCC-CeEEEEeCHHHHHHHHH
Confidence 6789999999999985 669999999 6999999988876521 011 13456665544477888
Q ss_pred HHhh
Q 018126 199 YFEG 202 (360)
Q Consensus 199 ~f~~ 202 (360)
++++
T Consensus 65 ~~~~ 68 (236)
T 2vsh_A 65 LVDK 68 (236)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8865
No 44
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=97.84 E-value=6.4e-05 Score=68.06 Aligned_cols=40 Identities=18% Similarity=0.439 Sum_probs=36.1
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~ 161 (360)
++.+|+||||.|||||.+.||.+.|+ .||+++++.++++.
T Consensus 7 ~~~~iIlA~G~g~R~~~~~~K~l~~i---~g~pll~~~i~~l~ 46 (236)
T 1i52_A 7 DVCAVVPAAGFGRRMQTECPKQYLSI---GNQTILEHSVHALL 46 (236)
T ss_dssp CEEEEEEECCCCGGGCCSSCGGGSEE---TTEEHHHHHHHHHH
T ss_pred ceeEEEECCcCccccCCCCCcceeeE---CCEEHHHHHHHHHH
Confidence 58899999999999997779999999 69999999888765
No 45
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=97.82 E-value=7.7e-05 Score=65.11 Aligned_cols=62 Identities=15% Similarity=0.221 Sum_probs=45.8
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (360)
++.+|+||||.||||| .||.+.|+ .|++++++.++++... ++. ..+|.|+. ..+.+.+
T Consensus 5 ~~~~iIlA~G~~~R~g--~~K~l~~~---~g~pll~~~l~~l~~~---------------~~~-~i~vv~~~-~~~~~~~ 62 (197)
T 2wee_A 5 QITGVVLAAGRSNRLG--TPKQLLPY---RDTTVLGATLDVARQA---------------GFD-QLILTLGG-AASAVRA 62 (197)
T ss_dssp EEEEEEEECCCCTTTS--SCGGGSEE---TTEEHHHHHHHHHHHT---------------TCS-EEEEEECT-THHHHHH
T ss_pred ceEEEEECCCCcccCC--CCeEcCee---CCccHHHHHHHHHHhc---------------CCC-cEEEEeCC-CHHHHHH
Confidence 5889999999999997 79999999 6999999988877531 211 34555544 4566777
Q ss_pred HHhh
Q 018126 199 YFEG 202 (360)
Q Consensus 199 ~f~~ 202 (360)
++.+
T Consensus 63 ~~~~ 66 (197)
T 2wee_A 63 AMAL 66 (197)
T ss_dssp HSCC
T ss_pred Hhcc
Confidence 6653
No 46
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=97.72 E-value=0.00022 Score=68.95 Aligned_cols=179 Identities=17% Similarity=0.199 Sum_probs=95.9
Q ss_pred CEEEEEecCCCccccC----CCCCCCceeecCCCC-CccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcch
Q 018126 119 KLAVLLLSGGQGTRLG----SSDPKGCVNIGLPSG-KSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTD 193 (360)
Q Consensus 119 kvavvlLAGG~GTRLg----~~~pKg~~~i~l~s~-ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~ 193 (360)
++.+|+||||.||||. ...||.++|+ .| +|++|+.++++... .++. ..+|.|.....
T Consensus 2 ~m~~VILAgG~GtRl~Pls~~~~pK~ll~l---~G~~pli~~~l~~l~~~--------------~~~~-~iiVvt~~~~~ 63 (337)
T 2cu2_A 2 KTYALVMAGGRGERLWPLSREDRPKPFLPL---FEGKTLLEATLERLAPL--------------VPPE-RTLLAVRRDQE 63 (337)
T ss_dssp CEEEEEECCCCCGGGTTTCBTTBCGGGCBC---GGGCBHHHHHHHHHTTT--------------SCGG-GEEEEEEGGGH
T ss_pred CeEEEEEcCCCcccCCccCCCCCCceEEEc---CCCChHHHHHHHHHhCc--------------CCCC-CEEEEcChHHH
Confidence 3678999999999996 4679999888 55 99999988877531 0111 34566654333
Q ss_pred HHHHHHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEc
Q 018126 194 DATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYG 273 (360)
Q Consensus 194 ~~t~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~ 273 (360)
+.+.+++.+ + .+ +++ ..|.|.|........ +... .+-+++.+.+
T Consensus 64 ~~i~~~l~~-----~---~~-----------------i~e------~~~~gta~ai~~a~~---l~~~--~~~~~~lvl~ 107 (337)
T 2cu2_A 64 AVARPYADG-----I---RL-----------------LLE------PLGRDTAGAVLLGVA---EALK--EGAERLLVLP 107 (337)
T ss_dssp HHHGGGCSS-----S---EE-----------------EEE------SSCCHHHHHHHHHHH---HHHH--HTCSEEEEEE
T ss_pred HHHHHHhcc-----C---ce-----------------Eec------CCCCCcHHHHHHHHH---Hhcc--CCCCEEEEEE
Confidence 444444321 0 11 111 124556654443321 2211 1357899999
Q ss_pred CCCccccccCHH----HHHHHH---HcCCceEEEEeecCCCCcccceEEEEcc-CCCeEEEEecCCChHHHhhcccCCCc
Q 018126 274 VDNALVRVADPT----FLGYFI---DKGVSAGAKVVRKAYPQEKVGVFVRRGK-GGPLTVVEYSELDPSLASAINQETGR 345 (360)
Q Consensus 274 vDN~L~~~~DP~----flG~~~---~~~~~~~~kvv~K~~p~E~vGvi~~~~~-~g~~~vvEYsel~~~~~~~~~~~~g~ 345 (360)
.|.++. ++. .+.-.. ..++.+++-+.+ +.|....|.|..... ++...|..+.|=|.....+....+|
T Consensus 108 ~D~~~~---~~~~~~~~l~~~~~~~~~~~~vt~~i~p-~~~~t~yG~I~~~~~~~~~~~V~~f~EKp~~~~a~~~~~~g- 182 (337)
T 2cu2_A 108 ADHYVG---DDEAYREALATMLEAAEEGFVVALGLRP-TRPETEYGYIRLGPREGAWYRGEGFVEKPSYAEALEYIRKG- 182 (337)
T ss_dssp SSCEES---CHHHHHHHHHHHHHHCCTTCEEEEEECC-SSCCSSSCEEEEEEEETTEEEEEEEECCCCHHHHHHHHHTT-
T ss_pred CCccCC---CHHHHHHHHHHHHHHHHcCCeEEEeecc-CCCCCCceEEEECCcccccCeEEEEEeCCChHHHHHHhhcC-
Confidence 999863 332 122111 125555555544 446677898865310 0113566666655432111111134
Q ss_pred eeeeccceeeeeec
Q 018126 346 LRFCWSNVCTFAST 359 (360)
Q Consensus 346 l~f~~gni~~h~f~ 359 (360)
- .-|..+++|+
T Consensus 183 -~--~~n~Giy~f~ 193 (337)
T 2cu2_A 183 -Y--VWNGGVFAFA 193 (337)
T ss_dssp -C--EEEEEEEEEC
T ss_pred -C--EEEEEEEEEe
Confidence 1 2366677765
No 47
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=97.61 E-value=7.2e-05 Score=67.16 Aligned_cols=40 Identities=30% Similarity=0.479 Sum_probs=29.9
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~ 161 (360)
++.+|+||||.|||||.+.||.+.|+ .||+++++.++++.
T Consensus 4 ~~~aiIlAaG~g~R~~~~~~K~l~~i---~g~pli~~~l~~l~ 43 (228)
T 2yc3_A 4 SVSVILLAGGQGKRMKMSMPKQYIPL---LGQPIALYSFFTFS 43 (228)
T ss_dssp CEEEEEECCCCC-------CGGGSEE---TTEEHHHHHHHHHH
T ss_pred ceEEEEECCccccccCCCCCccEeEE---CCEEHHHHHHHHHH
Confidence 68899999999999997789999999 79999999888765
No 48
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=97.59 E-value=0.00046 Score=64.20 Aligned_cols=145 Identities=14% Similarity=0.133 Sum_probs=85.2
Q ss_pred EEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHH-HHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHH
Q 018126 120 LAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQA-ERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (360)
Q Consensus 120 vavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~-e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (360)
+.+|++|||.||||+ +|.+.|| .||+++++.+ +++.+ .++. ..+|-|. ++.+.+
T Consensus 2 ~~aiIlA~G~stR~~---~K~L~~i---~GkPli~~~i~~~~~~---------------~~~~-~vvVvt~---~~~i~~ 56 (253)
T 4fcu_A 2 KHIVIPARFSSSRLP---GKPLLLI---HDRPMILRVVDQAKKV---------------EGFD-DLCVATD---DERIAE 56 (253)
T ss_dssp EEEEEECCSCCTTST---TGGGSEE---TTEEHHHHHHHHHHTC---------------TTCC-EEEEEES---CHHHHH
T ss_pred eEEEEEeCCCCCCCC---CCceeeE---CCeEhHHHHHHHHHHh---------------cCCC-EEEEECC---HHHHHH
Confidence 468999999999997 5999999 8999999988 76542 1211 2455553 588888
Q ss_pred HHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCCcc
Q 018126 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (360)
Q Consensus 199 ~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN~L 278 (360)
++++ ||.+ +.+ . . ...|.|.+.+..++. .+...+.+++.+++.|++|
T Consensus 57 ~~~~---~g~~---v~~-~----------------~----~~~~~Gt~~i~~a~~------~~~~~~~d~vlv~~gD~Pl 103 (253)
T 4fcu_A 57 ICRA---EGVD---VVL-T----------------S----ADHPSGTDRLSEVAR------IKGWDADDIIVNVQGDEPL 103 (253)
T ss_dssp HHHT---TTCC---EEE-C----------------C----TTCCCHHHHHHHHHH------HHTCCTTCEEEECCTTCTT
T ss_pred HHHH---cCCe---EEE-e----------------C----CCCCChHHHHHHHHH------hcCcCCCCEEEEEeCCccc
Confidence 8874 5543 111 1 0 012345544544442 3322356899999999998
Q ss_pred ccccCHHH----HHHHHHc-CCceEEEEeec------CCCCcccceEEEEccCCCeEEEEecC
Q 018126 279 VRVADPTF----LGYFIDK-GVSAGAKVVRK------AYPQEKVGVFVRRGKGGPLTVVEYSE 330 (360)
Q Consensus 279 ~~~~DP~f----lG~~~~~-~~~~~~kvv~K------~~p~E~vGvi~~~~~~g~~~vvEYse 330 (360)
.+|.. +-.+.+. +..++.-+++- .+|.. +++++ +++|+ ++-+++
T Consensus 104 ---i~~~~i~~li~~~~~~~~~~~at~~~~~~~~~~~~~p~~-~kvv~--d~~g~--~l~fsr 158 (253)
T 4fcu_A 104 ---LPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSI-VKVVM--SKQNE--ALYFSR 158 (253)
T ss_dssp ---CCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTS-CEEEE--CTTSB--EEEEES
T ss_pred ---CCHHHHHHHHHHHHhCCCCCEEEEeEEcCCHHHccCCCc-cEEEE--CCCCe--EEEecC
Confidence 34543 4444444 34554333331 34443 45543 23564 444555
No 49
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=97.57 E-value=0.00092 Score=60.21 Aligned_cols=37 Identities=35% Similarity=0.523 Sum_probs=32.7
Q ss_pred EEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHH
Q 018126 120 LAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (360)
Q Consensus 120 vavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~ 161 (360)
+.+|+||||.||||| .||.+.++ .|++++++.++++.
T Consensus 1 m~aiILAgG~s~Rmg--~~K~ll~~---~G~pli~~~~~~l~ 37 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIG--MEKTEVML---CGKKLIEWVLEKYS 37 (208)
T ss_dssp CEEEEECCCCCTTTT--SCGGGCEE---TTEEHHHHHHHHHT
T ss_pred CEEEEECCCchhhCC--CCCcccEE---CCeeHHHHHHHHhc
Confidence 367999999999999 79999999 89999999888664
No 50
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=97.51 E-value=0.0009 Score=65.12 Aligned_cols=132 Identities=21% Similarity=0.231 Sum_probs=79.3
Q ss_pred EEEEecCCCccccC---CCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHH
Q 018126 121 AVLLLSGGQGTRLG---SSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 197 (360)
Q Consensus 121 avvlLAGG~GTRLg---~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~ 197 (360)
.+|+||||.||||+ ...||.++|+ .+|+++++.++++.+. ++. ..+|.|+.. +.
T Consensus 2 ~aiIlA~G~g~R~~plt~~~~K~ll~i---~g~pli~~~l~~l~~~---------------~~~-~i~vv~~~~----i~ 58 (401)
T 2ggo_A 2 KAFILAAGSGERLEPITHTRPKAFVPI---LSKPLIEYQIEYLRKC---------------GIR-DITVIVSSK----NK 58 (401)
T ss_dssp EEEEECCCCCGGGTTGGGTSCGGGCEE---TTEEHHHHHHHHHHHT---------------TCC-EEEEEECGG----GH
T ss_pred eEEEEcCcCccccCcccCCCCcceeeE---CCEeHHHHHHHHHHHC---------------CCC-EEEEEeCHH----HH
Confidence 47899999999997 4679999999 7999999998877531 211 345666544 77
Q ss_pred HHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCCCeEEEEEcCCCc
Q 018126 198 KYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNA 277 (360)
Q Consensus 198 ~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~Gi~yi~v~~vDN~ 277 (360)
+++++... .+.+..+. . .|.|.++.+....+ -+++++...|.+
T Consensus 59 ~~~~~~~~------~i~~~~~~----------------~----~~~g~~~~l~~~~~-----------~~~~lv~~~D~~ 101 (401)
T 2ggo_A 59 EYFEKKLK------EISIVTQK----------------D----DIKGTGAAILSAKF-----------NDEALIIYGDLF 101 (401)
T ss_dssp HHHHHHCT------TCEEEECC----------------T----TCCBSTTTGGGCCC-----------SSEEEEEETTEE
T ss_pred HHhhccCC------cEEEEeCC----------------C----CCCChHHHHHHhcc-----------CCCEEEEeCccc
Confidence 77765310 23332210 0 13455544333221 368889999998
Q ss_pred cccccCHHHHHHHHHcCCceEEEEeecCCCCcccceEEEE
Q 018126 278 LVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRR 317 (360)
Q Consensus 278 L~~~~DP~flG~~~~~~~~~~~kvv~K~~p~E~vGvi~~~ 317 (360)
+. +|..+--..+ .+++++-+.+..++ .+.|++...
T Consensus 102 ~~---~~~~~~~l~~-~~~~~i~~~~~~~~-~~~~~v~~~ 136 (401)
T 2ggo_A 102 FS---NEKEICNIIT-LKENAIIGVKVSNP-KDYGVLVLD 136 (401)
T ss_dssp ES---CSHHHHHHTT-CSSEEEEEEECSCC-SSSCEEEEC
T ss_pred cc---cHHHHHHHHH-hcCCEEEEEEcCCC-cceeEEEEC
Confidence 52 3444444444 45555555544433 345766553
No 51
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=97.46 E-value=0.00012 Score=64.31 Aligned_cols=61 Identities=28% Similarity=0.546 Sum_probs=43.4
Q ss_pred EEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCCcchHHHHHHH
Q 018126 121 AVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYF 200 (360)
Q Consensus 121 avvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~~f 200 (360)
.+|+||||.|||||. .||.+.|+ .|++++++.++++.+ .++ =..+|.|+.. ++.+.+++
T Consensus 2 ~aiIlA~G~s~R~~~-~~K~l~~~---~g~pli~~~l~~l~~---------------~~~-~~v~vv~~~~-~~~i~~~~ 60 (196)
T 3rsb_A 2 DALIMAGGKGTRMGG-VEKPLIKL---CGRCLIDYVVSPLLK---------------SKV-NNIFIATSPN-TPKTKEYI 60 (196)
T ss_dssp EEEEEC----CGGGG-SCGGGCEE---TTEEHHHHHHHHHHS---------------SSC-CCEEEECCTT-CHHHHHHH
T ss_pred EEEEECCCCCCcCCC-CCccEEEE---CCEEHHHHHHHHHHH---------------CCC-CEEEEEeCCC-hHHHHHHH
Confidence 578999999999986 79999999 799999998887652 121 1345666554 78899999
Q ss_pred hh
Q 018126 201 EG 202 (360)
Q Consensus 201 ~~ 202 (360)
++
T Consensus 61 ~~ 62 (196)
T 3rsb_A 61 NS 62 (196)
T ss_dssp HH
T ss_pred Hh
Confidence 86
No 52
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=97.25 E-value=0.0012 Score=65.06 Aligned_cols=40 Identities=15% Similarity=0.419 Sum_probs=35.9
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~ 161 (360)
++++|+||||.|||||.+.||.+.|+ .||+++++.++++.
T Consensus 3 ki~aIILAaG~ssRmg~~~pK~ll~l---~GkPLi~~~l~~l~ 42 (371)
T 1w55_A 3 EMSLIMLAAGNSTRFNTKVKKQFLRL---GNDPLWLYATKNLS 42 (371)
T ss_dssp CEEEEEECCSCCTTTCSSSCGGGCEE---BTEEHHHHHHHHHH
T ss_pred ccEEEEECCCCCccCCCCCCcceEEE---CCeEHHHHHHHHHH
Confidence 57899999999999997779999999 69999999888765
No 53
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=97.22 E-value=0.00019 Score=66.31 Aligned_cols=41 Identities=32% Similarity=0.533 Sum_probs=36.2
Q ss_pred CEEEEEecCCCccccC---CCCCCCceeecCCCCCccHHHHHHHHHH
Q 018126 119 KLAVLLLSGGQGTRLG---SSDPKGCVNIGLPSGKSLFQLQAERILC 162 (360)
Q Consensus 119 kvavvlLAGG~GTRLg---~~~pKg~~~i~l~s~ksllql~~e~i~~ 162 (360)
++.+|+||||.||||+ .+.||.+.|+ .|++++++.++++..
T Consensus 25 ~~~aiIlAaG~gtRl~plt~~~pK~l~~i---~gkpli~~~l~~l~~ 68 (254)
T 1jyk_A 25 RVKAIILAAGLGTRLRPLTENTPKALVQV---NQKPLIEYQIEFLKE 68 (254)
T ss_dssp CCEEEEEECSCCGGGTTTTSSSCGGGCEE---TTEEHHHHHHHHHHH
T ss_pred CceEEEECCCCcccCCcccCCCCCEEeeE---CCEEHHHHHHHHHHH
Confidence 5889999999999998 5779999999 699999999887763
No 54
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=97.20 E-value=0.00017 Score=65.78 Aligned_cols=37 Identities=30% Similarity=0.669 Sum_probs=26.7
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAER 159 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~ 159 (360)
++++|+||||.|||||.+ ||.+.|+ .|++++++.+++
T Consensus 25 ~~~aiILAgG~s~Rm~~~-~K~l~~i---~gkpli~~~l~~ 61 (236)
T 2px7_A 25 EVSVLIPAAGNGLRLGRG-PKAFLQV---GGRTLLEWTLAA 61 (236)
T ss_dssp CCEEEEECCC-------C-CGGGCBC---SSSBHHHHHHHH
T ss_pred ceEEEEEcCCCCccCCCC-CCeEEEE---CCEEHHHHHHHh
Confidence 688999999999999976 9999988 799999998776
No 55
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=97.20 E-value=0.0002 Score=63.48 Aligned_cols=38 Identities=21% Similarity=0.378 Sum_probs=33.2
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~ 161 (360)
++.+|+||||.|||||. ||.++|+ .|++++++.++++.
T Consensus 2 ~~~~iIlAgG~g~Rmg~--~K~l~~i---~g~pll~~~l~~l~ 39 (197)
T 3d5n_A 2 NIGVIILAAGEGKRFGG--DKLLAKI---DNTPIIMRTIRIYG 39 (197)
T ss_dssp CEEEEEECSCCTTCCCS--SGGGSBS---SSSBHHHHHHHHTT
T ss_pred ceEEEEECCcCcccCCC--CeeeCEe---CceEHHHHHHHHHH
Confidence 47889999999999985 9999988 79999999888664
No 56
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=97.19 E-value=0.00025 Score=63.14 Aligned_cols=39 Identities=31% Similarity=0.656 Sum_probs=34.9
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~ 161 (360)
++.+|+||||.||||| ..||.++|+ .|++++++.++++.
T Consensus 6 ~~~~iILAgG~s~Rmg-~~~K~ll~i---~G~pli~~~l~~l~ 44 (201)
T 1e5k_A 6 TITGVVLAGGKARRMG-GVDKGLLEL---NGKPLWQHVADALM 44 (201)
T ss_dssp SEEEEEECCCCCSSSC-SSCGGGSEE---TTEEHHHHHHHHHH
T ss_pred cceEEEEcCCCCCcCC-CCCCceeeE---CceeHHHHHHHHHH
Confidence 5889999999999998 579999999 79999999988765
No 57
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=97.18 E-value=0.00039 Score=62.71 Aligned_cols=39 Identities=28% Similarity=0.491 Sum_probs=28.5
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~ 161 (360)
++.+|+||||.|||||.. ||.++|+ .|++++++.++++.
T Consensus 18 ~~~~iIlA~G~g~R~~~~-~K~l~~i---~g~pli~~~l~~l~ 56 (232)
T 2xme_A 18 LMKAVILAAGLGTRLGGV-PKPLVRV---GGCEIILRTMKLLS 56 (232)
T ss_dssp CEEEEEEECC------CC-CGGGCEE---TTEEHHHHHHHHHG
T ss_pred cceEEEECCcCcCcCCCC-CcEEeEE---CCEEHHHHHHHHHH
Confidence 588999999999999754 9999999 78999999888664
No 58
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=96.67 E-value=0.00024 Score=63.09 Aligned_cols=38 Identities=26% Similarity=0.383 Sum_probs=33.5
Q ss_pred CEEEEEecCCCccccCCCCCCCceeecCCCCCccHHHHHHHHH
Q 018126 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (360)
Q Consensus 119 kvavvlLAGG~GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~ 161 (360)
++.+|+||||.||||| .||.+.|+ .|++++++.++++.
T Consensus 14 ~~~~iILA~G~g~Rmg--~~K~ll~i---~g~pll~~~l~~l~ 51 (201)
T 2e8b_A 14 VNTCYVLAGGKSKRFG--EDKLLYEI---KGKKVIERVYETAK 51 (201)
T ss_dssp CCEEEEEEESSCCCCS--TTHHHHHH---HHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCccCC--CCcccceE---CceEHHHHHHHHHH
Confidence 5788999999999998 79999988 68999999888765
No 59
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=95.91 E-value=0.0048 Score=55.78 Aligned_cols=39 Identities=23% Similarity=0.511 Sum_probs=32.1
Q ss_pred CEEEEEecCCC---ccccCCCCCCCceeecCCCCCccHHHHHHHHH
Q 018126 119 KLAVLLLSGGQ---GTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (360)
Q Consensus 119 kvavvlLAGG~---GTRLg~~~pKg~~~i~l~s~ksllql~~e~i~ 161 (360)
++.+|+||||. |+|+| ..||.+.|+ .|++++++.++++.
T Consensus 2 ~~~~vIlAaG~tRl~~r~~-~~~K~l~~i---~g~pll~~~l~~l~ 43 (232)
T 2dpw_A 2 RPSAIVLAGGKEAWAERFG-VGSKALVPY---RGRPMVEWVLEALY 43 (232)
T ss_dssp CCEEEEECCCBCSGGGTTT-CSBGGGSEE---TTEETHHHHHHHHH
T ss_pred ceeEEEECCCCCccccccC-CCCceeeEE---CCEEHHHHHHHHHH
Confidence 46789999999 55554 369999999 79999999988775
No 60
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=27.78 E-value=1.1e+02 Score=23.55 Aligned_cols=50 Identities=14% Similarity=0.102 Sum_probs=35.2
Q ss_pred chHHHHHHHhhcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCcccccCCCChhHhHHHhhCcHHHHHHHCC
Q 018126 192 TDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRG 265 (360)
Q Consensus 192 t~~~t~~~f~~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~P~GhGgi~~aL~~sg~l~~l~~~G 265 (360)
.....++.+.+. .| +.++|.+-.+|+. -|..+...+|.++|-|.++++.+
T Consensus 54 ~~~~~~~~l~~~--~g----------~~tvP~vfi~g~~------------igG~d~l~~l~~~G~L~~~l~~~ 103 (114)
T 3h8q_A 54 DGARVQEVLSEI--TN----------QKTVPNIFVNKVH------------VGGCDQTFQAYQSGLLQKLLQED 103 (114)
T ss_dssp THHHHHHHHHHH--HS----------CCSSCEEEETTEE------------EESHHHHHHHHHHTHHHHHHHSC
T ss_pred ChHHHHHHHHHH--hC----------CCccCEEEECCEE------------EeCHHHHHHHHHCCCHHHHhcCc
Confidence 445666766442 12 3578887777775 36678888999999999999843
No 61
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=21.21 E-value=2.2e+02 Score=27.76 Aligned_cols=128 Identities=21% Similarity=0.345 Sum_probs=66.6
Q ss_pred cccCCCCCCCceeecCC-CCCccHHHHHHHHHHHHHHHHhhhcCCCCCCCCceeEEEecCC--------cchHHHHHHHh
Q 018126 131 TRLGSSDPKGCVNIGLP-SGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSP--------FTDDATRKYFE 201 (360)
Q Consensus 131 TRLg~~~pKg~~~i~l~-s~ksllql~~e~i~~lq~la~~~~~~~~~~~~~~ipl~IMTS~--------~t~~~t~~~f~ 201 (360)
+++|...|||.+=.|+| +|||++-- .+|.+. + .|++.+... .+...+++.|.
T Consensus 175 ~~~gi~~prGvLL~GPPGTGKTllAk---------AiA~e~--------~--~~f~~v~~s~l~sk~vGese~~vr~lF~ 235 (405)
T 4b4t_J 175 ESLGIAQPKGVILYGPPGTGKTLLAR---------AVAHHT--------D--CKFIRVSGAELVQKYIGEGSRMVRELFV 235 (405)
T ss_dssp HHHTCCCCCCEEEESCSSSSHHHHHH---------HHHHHH--------T--CEEEEEEGGGGSCSSTTHHHHHHHHHHH
T ss_pred HhCCCCCCCceEEeCCCCCCHHHHHH---------HHHHhh--------C--CCceEEEhHHhhccccchHHHHHHHHHH
Confidence 46678889999888887 59998732 223321 2 566666543 34556777776
Q ss_pred hcCCCCCCCCcEEEEEcCceeeeecCCcccccCCCccccc--C-CCChh--HhHHHhhCcHHHHHHH-CCCeEEEEEcCC
Q 018126 202 GHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKA--P-DGNGG--VYSALKSSKLLEDMAT-RGIKYIDCYGVD 275 (360)
Q Consensus 202 ~~~~FGl~~~~v~~f~Q~~~P~~~~~gki~l~~~~~i~~~--P-~GhGg--i~~aL~~sg~l~~l~~-~Gi~yi~v~~vD 275 (360)
.-.. .-||+- ++++=+.+..+ . .+.|+ +-..+ +.+|..|-. .+..-+.|+.-+
T Consensus 236 ~Ar~--------------~aP~II-----FiDEiDai~~~R~~~~~~~~~~~~~~l--~~lL~~lDg~~~~~~V~vIaAT 294 (405)
T 4b4t_J 236 MARE--------------HAPSII-----FMDEIDSIGSTRVEGSGGGDSEVQRTM--LELLNQLDGFETSKNIKIIMAT 294 (405)
T ss_dssp HHHH--------------TCSEEE-----EEESSSCCTTSCSCSSSGGGGHHHHHH--HHHHHHHHTTTCCCCEEEEEEE
T ss_pred HHHH--------------hCCceE-----eeecchhhccCCCCCCCCCcHHHHHHH--HHHHHhhhccCCCCCeEEEecc
Confidence 5321 123321 01111111111 1 11222 22222 245655542 244568888899
Q ss_pred CccccccCHHHHHHHHHcCCceEEEEe
Q 018126 276 NALVRVADPTFLGYFIDKGVSAGAKVV 302 (360)
Q Consensus 276 N~L~~~~DP~flG~~~~~~~~~~~kvv 302 (360)
|-. ...||.++= .-.+|.-+.+.
T Consensus 295 Nrp-d~LDpAllR---pGRfD~~I~i~ 317 (405)
T 4b4t_J 295 NRL-DILDPALLR---PGRIDRKIEFP 317 (405)
T ss_dssp SCS-SSSCHHHHS---TTSSCCEEECC
T ss_pred CCh-hhCCHhHcC---CCcCceEEEcC
Confidence 984 889998861 11345545543
Done!