BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018128
(360 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/292 (44%), Positives = 182/292 (62%), Gaps = 5/292 (1%)
Query: 33 RSFTFRELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQ-EFIVE 91
+ F+ REL +A+ NF N++G GGFGKVYKGRL G LVA+K+L E QG + +F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 92 VLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIA 151
V M+S+ H NL+ L G+C + +RLLVY YM GS+ L + Q PL W R +IA
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM 211
+G+ARGL YLH +P +I+RD+K+ANILLD +F + DFGLAKL D HV V
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXAVR 204
Query: 212 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQN--LVSWSRPFL 269
GT G+ APEY +GK + K+D++ +GV+LLELITG++A DL++ + + L+ W + L
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 264
Query: 270 KDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALD 321
K +KK LVD L G Y + + V +C RP ++++V L+
Sbjct: 265 K-EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 237 bits (605), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 181/292 (61%), Gaps = 5/292 (1%)
Query: 33 RSFTFRELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQ-EFIVE 91
+ F+ REL +A+ NF N++G GGFGKVYKGRL G LVA+K+L E QG + +F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 92 VLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIA 151
V M+S+ H NL+ L G+C + +RLLVY YM GS+ L + Q PL W R +IA
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM 211
+G+ARGL YLH +P +I+RD+K+ANILLD +F + DFGLAKL D HV V
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXAVR 196
Query: 212 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQN--LVSWSRPFL 269
G G+ APEY +GK + K+D++ +GV+LLELITG++A DL++ + + L+ W + L
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256
Query: 270 KDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALD 321
K +KK LVD L G Y + + V +C RP ++++V L+
Sbjct: 257 K-EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 171/291 (58%), Gaps = 4/291 (1%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLL 98
+L AT NF LIG G FGKVYKG L G VA+K+ E QG +EF E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H +LV+LIG+C ++ +L+Y+YM G+L+ HLY + +SW R++I +GAARGL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
YLH +A +I+RD+KS NILLD +F PK++DFG++K G D TH+ V GT GY
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHL 278
PEY + G+LT KSD+YSFGVVL E++ R A+ S + NL W+ + + +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-HNNGQLEQI 268
Query: 279 VDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDS 329
VDP L + L CL + RP + D++ L+Y + ++S
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 170/291 (58%), Gaps = 4/291 (1%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLL 98
+L AT NF LIG G FGKVYKG L G VA+K+ E QG +EF E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H +LV+LIG+C ++ +L+Y+YM G+L+ HLY + +SW R++I +GAARGL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
YLH +A +I+RD+KS NILLD +F PK++DFG++K G TH+ V GT GY
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHL 278
PEY + G+LT KSD+YSFGVVL E++ R A+ S + NL W+ + + +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-HNNGQLEQI 268
Query: 279 VDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDS 329
VDP L + L CL + RP + D++ L+Y + ++S
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/294 (41%), Positives = 170/294 (57%), Gaps = 21/294 (7%)
Query: 34 SFTFRELAIATRNFRE------ANLIGEGGFGKVYKGRLES-----GQLVAIKQLNHEGL 82
SF+F EL T NF E N +GEGGFG VYKG + + +L A+ + E L
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 73
Query: 83 QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPL 142
+ Q+F E+ +++ H+NLV L+G+ + GD LVY YMP GSL D L L+ PL
Sbjct: 74 K--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPL 130
Query: 143 SWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGD 202
SW+ R KIA GAA G+ +LH + I+RD+KSANILLD F K+SDFGLA+
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 203 NTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLV 262
T + +R++GT Y APE A+ G++T KSDIYSFGVVLLE+ITG A+D + + Q L+
Sbjct: 188 QTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD--EHREPQLLL 244
Query: 263 SWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDI 316
++K +D ++ + +V + CL+E+ N RP I +
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/294 (41%), Positives = 169/294 (57%), Gaps = 21/294 (7%)
Query: 34 SFTFRELAIATRNFRE------ANLIGEGGFGKVYKGRLES-----GQLVAIKQLNHEGL 82
SF+F EL T NF E N +GEGGFG VYKG + + +L A+ + E L
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 73
Query: 83 QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPL 142
+ Q+F E+ +++ H+NLV L+G+ + GD LVY YMP GSL D L L+ PL
Sbjct: 74 K--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPL 130
Query: 143 SWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGD 202
SW+ R KIA GAA G+ +LH + I+RD+KSANILLD F K+SDFGLA+
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 203 NTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLV 262
T + R++GT Y APE A+ G++T KSDIYSFGVVLLE+ITG A+D + + Q L+
Sbjct: 188 QTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD--EHREPQLLL 244
Query: 263 SWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDI 316
++K +D ++ + +V + CL+E+ N RP I +
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 168/294 (57%), Gaps = 21/294 (7%)
Query: 34 SFTFRELAIATRNFRE------ANLIGEGGFGKVYKGRLESG-----QLVAIKQLNHEGL 82
SF+F EL T NF E N +GEGGFG VYKG + + +L A+ + E L
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 67
Query: 83 QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPL 142
+ Q+F E+ +++ H+NLV L+G+ + GD LVY YMP GSL D L L+ PL
Sbjct: 68 K--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPL 124
Query: 143 SWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGD 202
SW+ R KIA GAA G+ +LH + I+RD+KSANILLD F K+SDFGLA+
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 203 NTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLV 262
+ R++GT Y APE A+ G++T KSDIYSFGVVLLE+ITG A+D + + Q L+
Sbjct: 182 QXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD--EHREPQLLL 238
Query: 263 SWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDI 316
++K +D ++ + +V + CL+E+ N RP I +
Sbjct: 239 DIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 164/294 (55%), Gaps = 21/294 (7%)
Query: 34 SFTFRELAIATRNFRE------ANLIGEGGFGKVYKGRLES-----GQLVAIKQLNHEGL 82
SF+F EL T NF E N GEGGFG VYKG + + +L A+ + E L
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 64
Query: 83 QGHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPL 142
+ Q+F E+ + + H+NLV L+G+ + GD LVY Y P GSL D L L+ PL
Sbjct: 65 K--QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLD-GTPPL 121
Query: 143 SWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGD 202
SW+ R KIA GAA G+ +LH + I+RD+KSANILLD F K+SDFGLA+
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 203 NTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLV 262
+R++GT Y APE A+ G++T KSDIYSFGVVLLE+ITG A+D + + Q L+
Sbjct: 179 QXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD--EHREPQLLL 235
Query: 263 SWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDI 316
++K +D + + +V + CL+E+ N RP I +
Sbjct: 236 DIKEEIEDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 146/297 (49%), Gaps = 29/297 (9%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + +G+G FG V R + +G++VA+K+L H + ++F E+ +L L
Sbjct: 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 100
Query: 100 HDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
HDN+V G C S +R L+ EY+P GSL D+ L+ +E + ++ +G
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKG 157
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL K I+RDL + NIL++N+ K+ DFGL K+ P D + G
Sbjct: 158 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIF 213
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK- 274
+ APE K ++ SD++SFGVVL EL T ++ SK + R D++
Sbjct: 214 WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----AEFMRMIGNDKQGQ 266
Query: 275 --FVHLVDPLL-HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQ 326
HL++ L +GR PR C + + C N N RP D+ + +D + Q
Sbjct: 267 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 146/297 (49%), Gaps = 29/297 (9%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + +G+G FG V R + +G++VA+K+L H + ++F E+ +L L
Sbjct: 8 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 67
Query: 100 HDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
HDN+V G C S +R L+ EY+P GSL D+ L+ +E + ++ +G
Sbjct: 68 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKG 124
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL K I+RDL + NIL++N+ K+ DFGL K+ P D + G
Sbjct: 125 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIF 180
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK- 274
+ APE K ++ SD++SFGVVL EL T ++ SK + R D++
Sbjct: 181 WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----AEFMRMIGNDKQGQ 233
Query: 275 --FVHLVDPLL-HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQ 326
HL++ L +GR PR C + + C N N RP D+ + +D + Q
Sbjct: 234 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 290
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 146/293 (49%), Gaps = 27/293 (9%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + +G+G FG V R + +G++VA+K+L H + ++F E+ +L L
Sbjct: 14 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 73
Query: 100 HDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
HDN+V G C S +R L+ EY+P GSL D+ L+ +E + ++ +G
Sbjct: 74 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKG 130
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL K I+RDL + NIL++N+ K+ DFGL K+ P D + G
Sbjct: 131 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIF 186
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQ--NLVSWSRPFLKDQK 273
+ APE K ++ SD++SFGVVL EL T ++ SK + ++ + + Q
Sbjct: 187 WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDK---QGQM 240
Query: 274 KFVHLVDPLL-HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
HL++ L +GR PR C + + C N N RP D+ + +D +
Sbjct: 241 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 293
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 29/294 (9%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + +G+G FG V R + +G++VA+K+L H + ++F E+ +L L
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 69
Query: 100 HDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
HDN+V G C S +R L+ EY+P GSL D+ L+ +E + ++ +G
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKG 126
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL K I+RDL + NIL++N+ K+ DFGL K+ P D + G
Sbjct: 127 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIF 182
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK- 274
+ APE K ++ SD++SFGVVL EL T ++ SK + R D++
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----AEFMRMIGNDKQGQ 235
Query: 275 --FVHLVDPLL-HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
HL++ L +GR PR C + + C N N RP D+ + +D +
Sbjct: 236 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 29/294 (9%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + +G+G FG V R + +G++VA+K+L H + ++F E+ +L L
Sbjct: 17 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 76
Query: 100 HDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
HDN+V G C S +R L+ EY+P GSL D+ L+ +E + ++ +G
Sbjct: 77 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKG 133
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL K I+RDL + NIL++N+ K+ DFGL K+ P D + G
Sbjct: 134 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIF 189
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK- 274
+ APE K ++ SD++SFGVVL EL T ++ SK + R D++
Sbjct: 190 WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----AEFMRMIGNDKQGQ 242
Query: 275 --FVHLVDPLL-HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
HL++ L +GR PR C + + C N N RP D+ + +D +
Sbjct: 243 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 296
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 29/294 (9%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + +G+G FG V R + +G++VA+K+L H + ++F E+ +L L
Sbjct: 9 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 68
Query: 100 HDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
HDN+V G C S +R L+ EY+P GSL D+ L+ +E + ++ +G
Sbjct: 69 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKG 125
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL K I+RDL + NIL++N+ K+ DFGL K+ P D + G
Sbjct: 126 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIF 181
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK- 274
+ APE K ++ SD++SFGVVL EL T ++ SK + R D++
Sbjct: 182 WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----AEFMRMIGNDKQGQ 234
Query: 275 --FVHLVDPLL-HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
HL++ L +GR PR C + + C N N RP D+ + +D +
Sbjct: 235 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 288
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 146/293 (49%), Gaps = 27/293 (9%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + +G+G FG V R + +G++VA+K+L H + ++F E+ +L L
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 69
Query: 100 HDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
HDN+V G C S +R L+ EY+P GSL D+ L+ +E + ++ +G
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKG 126
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL K I+RDL + NIL++N+ K+ DFGL K+ P D + G
Sbjct: 127 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEFFKVKEPGESPIF 182
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQ--NLVSWSRPFLKDQK 273
+ APE K ++ SD++SFGVVL EL T ++ SK + ++ + + Q
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDK---QGQM 236
Query: 274 KFVHLVDPLL-HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
HL++ L +GR PR C + + C N N RP D+ + +D +
Sbjct: 237 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 29/294 (9%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + +G+G FG V R + +G++VA+K+L H + ++F E+ +L L
Sbjct: 15 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 74
Query: 100 HDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
HDN+V G C S +R L+ EY+P GSL D+ L+ +E + ++ +G
Sbjct: 75 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKG 131
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL K I+RDL + NIL++N+ K+ DFGL K+ P D + G
Sbjct: 132 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIF 187
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK- 274
+ APE K ++ SD++SFGVVL EL T ++ SK + R D++
Sbjct: 188 WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----AEFMRMIGNDKQGQ 240
Query: 275 --FVHLVDPLL-HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
HL++ L +GR PR C + + C N N RP D+ + +D +
Sbjct: 241 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 294
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 29/294 (9%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + +G+G FG V R + +G++VA+K+L H + ++F E+ +L L
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 87
Query: 100 HDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
HDN+V G C S +R L+ EY+P GSL D+ L+ +E + ++ +G
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKG 144
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL K I+RDL + NIL++N+ K+ DFGL K+ P D + G
Sbjct: 145 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIF 200
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK- 274
+ APE K ++ SD++SFGVVL EL T ++ SK + R D++
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----AEFMRMIGNDKQGQ 253
Query: 275 --FVHLVDPLL-HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
HL++ L +GR PR C + + C N N RP D+ + +D +
Sbjct: 254 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 29/294 (9%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + +G+G FG V R + +G++VA+K+L H + ++F E+ +L L
Sbjct: 16 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 75
Query: 100 HDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
HDN+V G C S +R L+ EY+P GSL D+ L+ +E + ++ +G
Sbjct: 76 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKG 132
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL K I+RDL + NIL++N+ K+ DFGL K+ P D + G
Sbjct: 133 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIF 188
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK- 274
+ APE K ++ SD++SFGVVL EL T ++ SK + R D++
Sbjct: 189 WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----AEFMRMIGNDKQGQ 241
Query: 275 --FVHLVDPLL-HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
HL++ L +GR PR C + + C N N RP D+ + +D +
Sbjct: 242 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 295
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 29/294 (9%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + +G+G FG V R + +G++VA+K+L H + ++F E+ +L L
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 69
Query: 100 HDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
HDN+V G C S +R L+ EY+P GSL D+ L+ +E + ++ +G
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKG 126
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL K I+RDL + NIL++N+ K+ DFGL K+ P D + G
Sbjct: 127 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIF 182
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK- 274
+ APE K ++ SD++SFGVVL EL T ++ SK + R D++
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----AEFMRMIGNDKQGQ 235
Query: 275 --FVHLVDPLL-HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
HL++ L +GR PR C + + C N N RP D+ + +D +
Sbjct: 236 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 29/294 (9%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + +G+G FG V R + +G++VA+K+L H + ++F E+ +L L
Sbjct: 13 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 72
Query: 100 HDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
HDN+V G C S +R L+ EY+P GSL D+ L+ +E + ++ +G
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKG 129
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL K I+RDL + NIL++N+ K+ DFGL K+ P D + G
Sbjct: 130 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIF 185
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK- 274
+ APE K ++ SD++SFGVVL EL T ++ SK + R D++
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----AEFMRMIGNDKQGQ 238
Query: 275 --FVHLVDPLL-HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
HL++ L +GR PR C + + C N N RP D+ + +D +
Sbjct: 239 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 29/294 (9%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + +G+G FG V R + +G++VA+K+L H + ++F E+ +L L
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 87
Query: 100 HDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
HDN+V G C S +R L+ EY+P GSL D+ L+ +E + ++ +G
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKG 144
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL K I+RDL + NIL++N+ K+ DFGL K+ P D + G
Sbjct: 145 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIF 200
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK- 274
+ APE K ++ SD++SFGVVL EL T ++ SK + R D++
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----AEFMRMIGNDKQGQ 253
Query: 275 --FVHLVDPLL-HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
HL++ L +GR PR C + + C N N RP D+ + +D +
Sbjct: 254 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 146/294 (49%), Gaps = 29/294 (9%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + +G+G FG V R + +G++VA+K+L H + ++F E+ +L L
Sbjct: 11 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 70
Query: 100 HDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
HDN+V G C S +R L+ EY+P GSL D+ L+ +E + ++ +G
Sbjct: 71 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY---LQKHKERIDHIKLLQYTSQICKG 127
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL K I+R+L + NIL++N+ K+ DFGL K+ P D + + G
Sbjct: 128 MEYLGTKR---YIHRNLATRNILVENENRVKIGDFGLTKVLP-QDKEYYKVKEPGESPIF 183
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK- 274
+ APE K ++ SD++SFGVVL EL T ++ SK + R D++
Sbjct: 184 WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----AEFMRMIGNDKQGQ 236
Query: 275 --FVHLVDPLL-HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
HL++ L +GR PR C + + C N N RP D+ + +D +
Sbjct: 237 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 290
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 144/294 (48%), Gaps = 29/294 (9%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + +G+G FG V R + +G++VA+K+L H + ++F E+ +L L
Sbjct: 13 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 72
Query: 100 HDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
HDN+V G C S +R L+ EY+P GSL D+ L+ E + ++ +G
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY---LQAHAERIDHIKLLQYTSQICKG 129
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL K I+RDL + NIL++N+ K+ DFGL K+ P D + G
Sbjct: 130 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIF 185
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK- 274
+ APE K ++ SD++SFGVVL EL T ++ SK + R D++
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----AEFMRMIGNDKQGQ 238
Query: 275 --FVHLVDPLL-HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
HL++ L +GR PR C + + C N N RP D+ + +D +
Sbjct: 239 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 148/299 (49%), Gaps = 42/299 (14%)
Query: 41 AIATRNFREANLIGEGGFGKVYKGRL-ESGQLVAIKQL---NHEG----LQGHQEFIVEV 92
+A IG+GGFG V+KGRL + +VAIK L + EG ++ QEF EV
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 93 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 152
++S L+H N+V L G + + +V E++P G L L D P+ W+ ++++ +
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLML 129
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANILLDN-DFN----PKLSDFGLAKLGPVGDNTHVS 207
A G+EY+ + NPP+++RDL+S NI L + D N K++DFGL++ + H
Sbjct: 130 DIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSV 183
Query: 208 TRVMGTYGYCAPEY--AMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWS 265
+ ++G + + APE A T K+D YSF ++L ++TG D
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-------------- 229
Query: 266 RPFLKDQKKFVHLV-DPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
+ + KF++++ + L P C V +C + + RP + IV L L
Sbjct: 230 -EYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 103/195 (52%), Gaps = 7/195 (3%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQ--EFIVEVLMLSLLHHDNLVTLIGYC 110
IG G FG V++ G VA+K L + + EF+ EV ++ L H N+V +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
T +V EY+ GSL L+ +E L R+ +A A+G+ YLH + NPP++
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIV 161
Query: 171 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK 230
+RDLKS N+L+D + K+ DFGL++L S GT + APE K
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLK--ASXFLXSKXAAGTPEWMAPEVLRDEPSNEK 219
Query: 231 SDIYSFGVVLLELIT 245
SD+YSFGV+L EL T
Sbjct: 220 SDVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 108/196 (55%), Gaps = 9/196 (4%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQ--EFIVEVLMLSLLHHDNLVTLIGYC 110
IG G FG V++ G VA+K L + + EF+ EV ++ L H N+V +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
T +V EY+ GSL L+ +E L R+ +A A+G+ YLH + NPP++
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIV 161
Query: 171 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTL 229
+R+LKS N+L+D + K+ DFGL++L +T +S++ GT + APE
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRL---KASTFLSSKSAAGTPEWMAPEVLRDEPSNE 218
Query: 230 KSDIYSFGVVLLELIT 245
KSD+YSFGV+L EL T
Sbjct: 219 KSDVYSFGVILWELAT 234
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 146/293 (49%), Gaps = 27/293 (9%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + +G+G FG V R + +G++VA+K+L H + ++F E+ +L L
Sbjct: 13 RHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 72
Query: 100 HDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
HDN+V G C S +R L+ E++P GSL ++ L+ +E + ++ +G
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREY---LQKHKERIDHIKLLQYTSQICKG 129
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL K I+RDL + NIL++N+ K+ DFGL K+ P D + G
Sbjct: 130 MEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIF 185
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQ--NLVSWSRPFLKDQK 273
+ APE K ++ SD++SFGVVL EL T ++ SK + ++ + + Q
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDK---QGQM 239
Query: 274 KFVHLVDPLL-HGRYPRR--CLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
HL++ L +GR PR C + + C N N RP D+ + +D +
Sbjct: 240 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 145/287 (50%), Gaps = 42/287 (14%)
Query: 53 IGEGGFGKVYKGRL-ESGQLVAIKQL---NHEG----LQGHQEFIVEVLMLSLLHHDNLV 104
IG+GGFG V+KGRL + +VAIK L + EG ++ QEF EV ++S L+H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
L G + + +V E++P G L L D P+ W+ ++++ + A G+EY+ +
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 165 ANPPVIYRDLKSANILLDN-DFN----PKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
NPP+++RDL+S NI L + D N K++DFG ++ + H + ++G + + AP
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 220 EY--AMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVH 277
E A T K+D YSF ++L ++TG D + + KF++
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD---------------EYSYGKIKFIN 240
Query: 278 LV-DPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
++ + L P C V +C + + RP + IV L L
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 145/287 (50%), Gaps = 42/287 (14%)
Query: 53 IGEGGFGKVYKGRL-ESGQLVAIKQL---NHEG----LQGHQEFIVEVLMLSLLHHDNLV 104
IG+GGFG V+KGRL + +VAIK L + EG ++ QEF EV ++S L+H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
L G + + +V E++P G L L D P+ W+ ++++ + A G+EY+ +
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 165 ANPPVIYRDLKSANILLDN-DFN----PKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
NPP+++RDL+S NI L + D N K++DF L++ + H + ++G + + AP
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 220 EY--AMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVH 277
E A T K+D YSF ++L ++TG D + + KF++
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD---------------EYSYGKIKFIN 240
Query: 278 LV-DPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
++ + L P C V +C + + RP + IV L L
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 138/279 (49%), Gaps = 32/279 (11%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
IG G FG VYKG+ VA+K LN Q Q F EV +L H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
T+ Q +V ++ SL HL+ +E E + + IA A+G++YLH K+ +I
Sbjct: 74 TA-PQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---II 126
Query: 171 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-MSGK--L 227
+RDLKS NI L D K+ DFGLA + +H ++ G+ + APE M K
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 228 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLH 284
+ +SD+Y+FG+VL EL+TG+ + +S +DQ F+ + P L
Sbjct: 187 SFQSDVYAFGIVLYELMTGQ--------------LPYSNINNRDQIIFMVGRGYLSPDL- 231
Query: 285 GRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
+ C + A CL ++ + RPL I+ +++ L
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 270
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 137/280 (48%), Gaps = 32/280 (11%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
IG G FG VYKG+ VA+K LN Q Q F EV +L H N++ +GY
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
T Q +V ++ SL HL+ +E E + + IA A+G++YLH K+ +I
Sbjct: 101 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---II 153
Query: 171 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY-AMSGK--L 227
+RDLKS NI L D K+ DFGLA + +H ++ G+ + APE M K
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 228 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLH 284
+ +SD+Y+FG+VL EL+TG+ + +S +DQ F+ + P L
Sbjct: 214 SFQSDVYAFGIVLYELMTGQ--------------LPYSNINNRDQIIFMVGRGYLSPDL- 258
Query: 285 GRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLV 324
+ C + A CL ++ + RPL I+ +++ L
Sbjct: 259 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLA 298
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 137/279 (49%), Gaps = 32/279 (11%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
IG G FG VYKG+ VA+K LN Q Q F EV +L H N++ +GY
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
T Q +V ++ SL HL+ +E E + + IA A+G++YLH K+ +I
Sbjct: 76 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---II 128
Query: 171 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-MSGK--L 227
+RDLKS NI L D K+ DFGLA + +H ++ G+ + APE M K
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 228 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLH 284
+ +SD+Y+FG+VL EL+TG+ + +S +DQ F+ + P L
Sbjct: 189 SFQSDVYAFGIVLYELMTGQ--------------LPYSNINNRDQIIFMVGRGYLSPDL- 233
Query: 285 GRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
+ C + A CL ++ + RPL I+ +++ L
Sbjct: 234 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 272
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 137/280 (48%), Gaps = 32/280 (11%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
IG G FG VYKG+ VA+K LN Q Q F EV +L H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
T Q +V ++ SL HL+ +E E + + IA A+G++YLH K+ +I
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---II 154
Query: 171 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY-AMSGK--L 227
+RDLKS NI L D K+ DFGLA + +H ++ G+ + APE M K
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 228 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLH 284
+ +SD+Y+FG+VL EL+TG+ + +S +DQ F+ + P L
Sbjct: 215 SFQSDVYAFGIVLYELMTGQ--------------LPYSNINNRDQIIFMVGRGYLSPDL- 259
Query: 285 GRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLV 324
+ C + A CL ++ + RPL I+ +++ L
Sbjct: 260 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLA 299
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 137/279 (49%), Gaps = 32/279 (11%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
IG G FG VYKG+ VA+K LN Q Q F EV +L H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
T Q +V ++ SL HL+ +E E + + IA A+G++YLH K+ +I
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---II 126
Query: 171 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-MSGK--L 227
+RDLKS NI L D K+ DFGLA + +H ++ G+ + APE M K
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 228 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLH 284
+ +SD+Y+FG+VL EL+TG+ + +S +DQ F+ + P L
Sbjct: 187 SFQSDVYAFGIVLYELMTGQ--------------LPYSNINNRDQIIFMVGRGYLSPDL- 231
Query: 285 GRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
+ C + A CL ++ + RPL I+ +++ L
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 270
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 137/279 (49%), Gaps = 32/279 (11%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
IG G FG VYKG+ VA+K LN Q Q F EV +L H N++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
T Q +V ++ SL HL+ +E E + + IA A+G++YLH K+ +I
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---II 131
Query: 171 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-MSGK--L 227
+RDLKS NI L D K+ DFGLA + +H ++ G+ + APE M K
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 228 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLH 284
+ +SD+Y+FG+VL EL+TG+ + +S +DQ F+ + P L
Sbjct: 192 SFQSDVYAFGIVLYELMTGQ--------------LPYSNINNRDQIIFMVGRGYLSPDL- 236
Query: 285 GRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
+ C + A CL ++ + RPL I+ +++ L
Sbjct: 237 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 275
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 137/279 (49%), Gaps = 32/279 (11%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
IG G FG VYKG+ VA+K LN Q Q F EV +L H N++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
T Q +V ++ SL HL+ +E E + + IA A+G++YLH K+ +I
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---II 131
Query: 171 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-MSGK--L 227
+RDLKS NI L D K+ DFGLA + +H ++ G+ + APE M K
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 228 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLH 284
+ +SD+Y+FG+VL EL+TG+ + +S +DQ F+ + P L
Sbjct: 192 SFQSDVYAFGIVLYELMTGQ--------------LPYSNINNRDQIIFMVGRGYLSPDL- 236
Query: 285 GRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
+ C + A CL ++ + RPL I+ +++ L
Sbjct: 237 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 275
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 136/280 (48%), Gaps = 32/280 (11%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
IG G FG VYKG+ VA+K LN Q Q F EV +L H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
T Q +V ++ SL HL+ +E E + + IA A+G++YLH K+ +I
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---II 154
Query: 171 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY-AMSGK--L 227
+RDLKS NI L D K+ DFGLA +H ++ G+ + APE M K
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 228 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLH 284
+ +SD+Y+FG+VL EL+TG+ + +S +DQ F+ + P L
Sbjct: 215 SFQSDVYAFGIVLYELMTGQ--------------LPYSNINNRDQIIFMVGRGYLSPDL- 259
Query: 285 GRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLV 324
+ C + A CL ++ + RPL I+ +++ L
Sbjct: 260 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLA 299
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 121/293 (41%), Gaps = 42/293 (14%)
Query: 53 IGEGGFGKVYKGRL------ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL 106
+GEG FGKV+ + LVA+K L Q+F E +L++L H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 107 IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE-----------PLSWNTRMKIAVGAA 155
G CT G L+V+EYM G L L PD + PL + +A A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 215
G+ YL A ++RDL + N L+ K+ DFG+++ D V R M
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKF 275
+ PE + K T +SD++SFGVVL E+ T K +P+ Q
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK-----------------QPWY--QLSN 237
Query: 276 VHLVDPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
+D + GR PR C A+ C E R I D+ L L
Sbjct: 238 TEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 290
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 121/293 (41%), Gaps = 42/293 (14%)
Query: 53 IGEGGFGKVYKGRL------ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL 106
+GEG FGKV+ + LVA+K L Q+F E +L++L H ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 107 IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE-----------PLSWNTRMKIAVGAA 155
G CT G L+V+EYM G L L PD + PL + +A A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 215
G+ YL A ++RDL + N L+ K+ DFG+++ D V R M
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKF 275
+ PE + K T +SD++SFGVVL E+ T K +P+ Q
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK-----------------QPWY--QLSN 266
Query: 276 VHLVDPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
+D + GR PR C A+ C E R I D+ L L
Sbjct: 267 TEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 136/280 (48%), Gaps = 32/280 (11%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
IG G FG VYKG+ VA+K LN Q Q F EV +L H N++ +GY
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
T Q +V ++ SL HL+ +E E + + IA A+G++YLH K+ +I
Sbjct: 94 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---II 146
Query: 171 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-MSGK--L 227
+RDLKS NI L D K+ DFGLA +H ++ G+ + APE M K
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 228 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLH 284
+ +SD+Y+FG+VL EL+TG+ + +S +DQ F+ + P L
Sbjct: 207 SFQSDVYAFGIVLYELMTGQ--------------LPYSNINNRDQIIFMVGRGYLSPDL- 251
Query: 285 GRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLV 324
+ C + A CL ++ + RPL I+ +++ L
Sbjct: 252 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLA 291
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 136/279 (48%), Gaps = 32/279 (11%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
IG G FG VYKG+ VA+K LN Q Q F EV +L H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
T Q +V ++ SL HL+ +E E + + IA A+G++YLH K+ +I
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---II 126
Query: 171 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-MSGK--L 227
+RDLKS NI L D K+ DFGLA +H ++ G+ + APE M K
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 228 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFV---HLVDPLLH 284
+ +SD+Y+FG+VL EL+TG+ + +S +DQ F+ + P L
Sbjct: 187 SFQSDVYAFGIVLYELMTGQ--------------LPYSNINNRDQIIFMVGRGYLSPDL- 231
Query: 285 GRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
+ C + A CL ++ + RPL I+ +++ L
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 270
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 121/293 (41%), Gaps = 42/293 (14%)
Query: 53 IGEGGFGKVYKGRL------ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL 106
+GEG FGKV+ + LVA+K L Q+F E +L++L H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 107 IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE-----------PLSWNTRMKIAVGAA 155
G CT G L+V+EYM G L L PD + PL + +A A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 215
G+ YL A ++RDL + N L+ K+ DFG+++ D V R M
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKF 275
+ PE + K T +SD++SFGVVL E+ T K +P+ Q
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK-----------------QPWY--QLSN 243
Query: 276 VHLVDPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
+D + GR PR C A+ C E R I D+ L L
Sbjct: 244 TEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 296
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
IG G FG VYKG+ VA+K LN Q Q F EV +L H N++ +GY
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
T Q +V ++ SL HL+ E E + IA ARG++YLH K+ +I
Sbjct: 78 TK-PQLAIVTQWCEGSSLYHHLHASETKFE---MKKLIDIARQTARGMDYLHAKS---II 130
Query: 171 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM---SGKL 227
+RDLKS NI L D K+ DFGLA + +H ++ G+ + APE S
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 228 TLKSDIYSFGVVLLELITGR 247
+ +SD+Y+FG+VL EL+TG+
Sbjct: 191 SFQSDVYAFGIVLYELMTGQ 210
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
IG G FG VYKG+ VA+K LN Q Q F EV +L H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
T+ Q +V ++ SL HL+ E E + IA ARG++YLH K+ +I
Sbjct: 90 TA-PQLAIVTQWCEGSSLYHHLHASETKFE---MKKLIDIARQTARGMDYLHAKS---II 142
Query: 171 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM---SGKL 227
+RDLKS NI L D K+ DFGLA +H ++ G+ + APE S
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 228 TLKSDIYSFGVVLLELITGR 247
+ +SD+Y+FG+VL EL+TG+
Sbjct: 203 SFQSDVYAFGIVLYELMTGQ 222
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
IG G FG VYKG+ VA+K LN Q Q F EV +L H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
T Q +V ++ SL HL+ E E + IA ARG++YLH K+ +I
Sbjct: 90 TK-PQLAIVTQWCEGSSLYHHLHASETKFE---MKKLIDIARQTARGMDYLHAKS---II 142
Query: 171 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM---SGKL 227
+RDLKS NI L D K+ DFGLA +H ++ G+ + APE S
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 228 TLKSDIYSFGVVLLELITGR 247
+ +SD+Y+FG+VL EL+TG+
Sbjct: 203 SFQSDVYAFGIVLYELMTGQ 222
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G G FG+V+ G VAIK L G + F+ E ++ L HD LV L S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQLYA-VVS 74
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
+ +V EYM GSL D L D E L + +A A G+ Y+ + N I+R
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGE--GRALKLPNLVDMAAQVAAGMAYIE-RMN--YIHR 129
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKS 231
DL+SANIL+ N K++DFGLA+L + DN + + + APE A+ G+ T+KS
Sbjct: 130 DLRSANILVGNGLICKIADFGLARL--IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 232 DIYSFGVVLLELIT 245
D++SFG++L EL+T
Sbjct: 188 DVWSFGILLTELVT 201
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 109/212 (51%), Gaps = 30/212 (14%)
Query: 52 LIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFI----VEVLMLSLLHHDNLVTLI 107
+IG GGFGKVY+ G VA+K H+ + + I E + ++L H N++ L
Sbjct: 14 IIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 108 GYCTSGDQRLLVYEYMPMGSLEDHLYD--LEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
G C LV E+ G L L + PD + AV ARG+ YLH +A
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPD-------ILVNWAVQIARGMNYLHDEA 125
Query: 166 NPPVIYRDLKSANILL-----DNDFNP---KLSDFGLAKLGPVGDNTHVSTRV--MGTYG 215
P+I+RDLKS+NIL+ + D + K++DFGLA+ H +T++ G Y
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHRTTKMSAAGAYA 179
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
+ APE + + SD++S+GV+L EL+TG
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 113/210 (53%), Gaps = 16/210 (7%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + + +G+G FG V R + +G LVA+KQL H G ++F E+ +L LH
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 82
Query: 100 HDNLVTLIGYCTS-GDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
D +V G G Q L LV EY+P G L D L + + L + + + +G
Sbjct: 83 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKG 139
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL + ++RDL + NIL++++ + K++DFGLAKL P+ + +V R G
Sbjct: 140 MEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV-VREPGQSPIF 195
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE + +SD++SFGVVL EL T
Sbjct: 196 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 113/210 (53%), Gaps = 16/210 (7%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + + +G+G FG V R + +G LVA+KQL H G ++F E+ +L LH
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 69
Query: 100 HDNLVTLIGYCTS-GDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
D +V G G Q L LV EY+P G L D L + + L + + + +G
Sbjct: 70 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKG 126
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL + ++RDL + NIL++++ + K++DFGLAKL P+ + +V R G
Sbjct: 127 MEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV-VREPGQSPIF 182
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE + +SD++SFGVVL EL T
Sbjct: 183 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 113/210 (53%), Gaps = 16/210 (7%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + + +G+G FG V R + +G LVA+KQL H G ++F E+ +L LH
Sbjct: 11 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 70
Query: 100 HDNLVTLIGYC-TSGDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
D +V G G Q L LV EY+P G L D L + + L + + + +G
Sbjct: 71 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKG 127
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL + ++RDL + NIL++++ + K++DFGLAKL P+ + +V R G
Sbjct: 128 MEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV-VREPGQSPIF 183
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE + +SD++SFGVVL EL T
Sbjct: 184 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 111/210 (52%), Gaps = 16/210 (7%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH 99
R+ + + +G+G FG V R + +G LVA+KQL H G ++F E+ +L LH
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 66
Query: 100 HDNLVTLIG--YCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
D +V G Y + LV EY+P G L D L + + L + + + +G
Sbjct: 67 SDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKG 123
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-- 215
+EYL + ++RDL + NIL++++ + K++DFGLAKL P+ + V R G
Sbjct: 124 MEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXV-VREPGQSPIF 179
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE + +SD++SFGVVL EL T
Sbjct: 180 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 137/288 (47%), Gaps = 25/288 (8%)
Query: 45 RNFREANLIGEGGFGKV----YKGRLE-SGQLVAIKQLNHE-GLQGHQEFIVEVLMLSLL 98
R ++ +GEG FGKV Y + +G++VA+K L + G Q + E+ +L L
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL 90
Query: 99 HHDNLVTLIGYCT-SGDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAAR 156
+H++++ G C +G L LV EY+P+GSL D+L + + + A
Sbjct: 91 YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICE 145
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH-VSTRVMGTYG 215
G+ YLH + I+RDL + N+LLDND K+ DFGLAK P G + V
Sbjct: 146 GMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVF 202
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKF 275
+ APE K SD++SFGV L EL+T D S+ + L + Q
Sbjct: 203 WYAPECLKEYKFYYASDVWSFGVTLYELLT---HCDSSQSPPTKFLELIG--IAQGQMTV 257
Query: 276 VHLVDPLLHG-RYPR--RCLNYAVAVTAMCLNEEANFRPLINDIVVAL 320
+ L + L G R PR +C + C EA+FRP +++ L
Sbjct: 258 LRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPIL 305
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 126/303 (41%), Gaps = 43/303 (14%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRL------ESGQLVAIKQLNHEGLQGHQEFIVEVLML 95
I R+ +GEG FGKV+ + LVA+K L L ++F E +L
Sbjct: 12 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELL 71
Query: 96 SLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD------------QEPLS 143
+ L H+++V G C GD ++V+EYM G L L PD + L
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 144 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN 203
+ + IA A G+ YL A+ ++RDL + N L+ + K+ DFG+++ D
Sbjct: 132 LSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY 188
Query: 204 THVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
V M + PE M K T +SD++SFGV+L E+ T K
Sbjct: 189 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK--------------- 233
Query: 264 WSRPFLKDQKKFVHLVDPLLHGRY---PRRCLNYAVAVTAMCLNEEANFRPLINDIVVAL 320
+P+ Q +++ + GR PR C V C E R I +I L
Sbjct: 234 --QPWF--QLSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKIL 289
Query: 321 DYL 323
L
Sbjct: 290 HAL 292
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 35/291 (12%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLL 98
E+ ++TR IG G FG VYKG+ V I ++ + Q F EV +L
Sbjct: 37 EVMLSTR-------IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKT 89
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H N++ +GY T D +V ++ SL HL+ E + + IA A+G+
Sbjct: 90 RHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQ---LIDIARQTAQGM 145
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
+YLH K +I+RD+KS NI L K+ DFGLA + + + G+ + A
Sbjct: 146 DYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202
Query: 219 PEYAM---SGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKF 275
PE + + +SD+YS+G+VL EL+TG + +S +DQ F
Sbjct: 203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE--------------LPYSHINNRDQIIF 248
Query: 276 V---HLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYL 323
+ P L Y + C + A C+ + RPL I+ +++ L
Sbjct: 249 MVGRGYASPDLSKLY-KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 141/290 (48%), Gaps = 29/290 (10%)
Query: 45 RNFREANLIGEGGFGKV----YKGRLE-SGQLVAIKQLNHE-GLQGHQEFIVEVLMLSLL 98
R ++ +GEG FGKV Y + +G++VA+K L + G Q + E+ +L L
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTL 73
Query: 99 HHDNLVTLIGYCT-SGDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAAR 156
+H++++ G C G++ L LV EY+P+GSL D+L + + + A
Sbjct: 74 YHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICE 128
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---T 213
G+ YLH + I+R+L + N+LLDND K+ DFGLAK P G + + R G
Sbjct: 129 GMAYLHAQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG-HEYYRVREDGDSPV 184
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQK 273
+ Y APE K SD++SFGV L EL+T D S+ + L + Q
Sbjct: 185 FWY-APECLKEYKFYYASDVWSFGVTLYELLT---HCDSSQSPPTKFLELIG--IAQGQM 238
Query: 274 KFVHLVDPLLHG-RYPR--RCLNYAVAVTAMCLNEEANFRPLINDIVVAL 320
+ L + L G R PR +C + C EA+FRP +++ L
Sbjct: 239 TVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPIL 288
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 124/273 (45%), Gaps = 31/273 (11%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G G FG+V+ G + VA+K L G Q F+ E ++ L HD LV L T
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
+ ++ EYM GSL D L E + L + + A G+ Y+ K I+R
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERKN---YIHR 134
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKS 231
DL++AN+L+ K++DFGLA++ + DN + + + APE G T+KS
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 232 DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHG-RYPR- 289
D++SFG++L E++T K G N ++ L G R PR
Sbjct: 193 DVWSFGILLYEIVTYGKI----PYPGRTN---------------ADVMTALSQGYRMPRV 233
Query: 290 -RCLNYAVAVTAMCLNEEANFRPLINDIVVALD 321
C + + MC E+A RP + + LD
Sbjct: 234 ENCPDELYDIMKMCWKEKAEERPTFDYLQSVLD 266
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 141/290 (48%), Gaps = 29/290 (10%)
Query: 45 RNFREANLIGEGGFGKV----YKGRLE-SGQLVAIKQLNHE-GLQGHQEFIVEVLMLSLL 98
R ++ +GEG FGKV Y + +G++VA+K L + G Q + E+ +L L
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTL 73
Query: 99 HHDNLVTLIGYCT-SGDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAAR 156
+H++++ G C G++ L LV EY+P+GSL D+L + + + A
Sbjct: 74 YHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICE 128
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---T 213
G+ YLH + I+R+L + N+LLDND K+ DFGLAK P G + + R G
Sbjct: 129 GMAYLHSQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG-HEYYRVREDGDSPV 184
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQK 273
+ Y APE K SD++SFGV L EL+T D S+ + L + Q
Sbjct: 185 FWY-APECLKEYKFYYASDVWSFGVTLYELLT---HCDSSQSPPTKFLELIG--IAQGQM 238
Query: 274 KFVHLVDPLLHG-RYPR--RCLNYAVAVTAMCLNEEANFRPLINDIVVAL 320
+ L + L G R PR +C + C EA+FRP +++ L
Sbjct: 239 TVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPIL 288
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 10/208 (4%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLL 98
E + + +G G FG+V+ G VA+K L +G F+ E ++ L
Sbjct: 17 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 75
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H LV L T + ++ EYM GSL D L P L+ N + +A A G+
Sbjct: 76 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 132
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYC 217
++ + I+RDL++ANIL+ + + K++DFGLA+L + DN + + +
Sbjct: 133 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWT 187
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELIT 245
APE G T+KSD++SFG++L E++T
Sbjct: 188 APEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 128/295 (43%), Gaps = 43/295 (14%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVT 105
+G+G FG VY+G + E+ VA+K +N L+ EF+ E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE------PLSWNTRMKIAVGAARGLE 159
L+G + G L+V E M G L+ +L L P+ E P + +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
YL+ K ++RDL + N ++ +DF K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E G T SD++SFGVVL E IT EQ L KFV
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL------------KFV--- 245
Query: 280 DPLLHGRY---PRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHP 331
+ G Y P C + MC N RP +IV L + D HP
Sbjct: 246 ---MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL-----KDDLHP 292
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 10/208 (4%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLL 98
E + + +G G FG+V+ G VA+K L +G F+ E ++ L
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 71
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H LV L T + ++ EYM GSL D L P L+ N + +A A G+
Sbjct: 72 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 128
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYC 217
++ + I+RDL++ANIL+ + + K++DFGLA+L + DN + + +
Sbjct: 129 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWT 183
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELIT 245
APE G T+KSD++SFG++L E++T
Sbjct: 184 APEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 10/208 (4%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLL 98
E + + +G G FG+V+ G VA+K L +G F+ E ++ L
Sbjct: 12 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 70
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H LV L T + ++ EYM GSL D L P L+ N + +A A G+
Sbjct: 71 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 127
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYC 217
++ + I+RDL++ANIL+ + + K++DFGLA+L + DN + + +
Sbjct: 128 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWT 182
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELIT 245
APE G T+KSD++SFG++L E++T
Sbjct: 183 APEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 10/208 (4%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLL 98
E + + +G G FG+V+ G VA+K L +G F+ E ++ L
Sbjct: 2 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 60
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H LV L T + ++ EYM GSL D L P L+ N + +A A G+
Sbjct: 61 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 117
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYC 217
++ + I+RDL++ANIL+ + + K++DFGLA+L + DN + + +
Sbjct: 118 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWT 172
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELIT 245
APE G T+KSD++SFG++L E++T
Sbjct: 173 APEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 138/300 (46%), Gaps = 42/300 (14%)
Query: 37 FRELAIATRNFREANLIGEGGFGKVYKGRL------ESGQLVAIKQLNHEGLQG--HQEF 88
+E++++ F E +GE FGKVYKG L E Q VAIK L + +G +EF
Sbjct: 20 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEF 76
Query: 89 IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTR- 147
E ++ + L H N+V L+G T +++ Y G L + L P + S +
Sbjct: 77 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 136
Query: 148 -----------MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK 196
+ + A G+EYL ++ V+++DL + N+L+ + N K+SD GL +
Sbjct: 137 TVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 193
Query: 197 LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQ 256
D + + + APE M GK ++ SDI+S+GVVL E+ + + G
Sbjct: 194 EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS--YGLQPYCGY 251
Query: 257 GEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDI 316
Q++V +++++ V P P C + A+ C NE + RP DI
Sbjct: 252 SNQDVVE----MIRNRQ-----VLPC-----PDDCPAWVYALMIECWNEFPSRRPRFKDI 297
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 138/300 (46%), Gaps = 42/300 (14%)
Query: 37 FRELAIATRNFREANLIGEGGFGKVYKGRL------ESGQLVAIKQLNHEGLQG--HQEF 88
+E++++ F E +GE FGKVYKG L E Q VAIK L + +G +EF
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEF 59
Query: 89 IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTR- 147
E ++ + L H N+V L+G T +++ Y G L + L P + S +
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 148 -----------MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK 196
+ + A G+EYL ++ V+++DL + N+L+ + N K+SD GL +
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 176
Query: 197 LGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQ 256
D + + + APE M GK ++ SDI+S+GVVL E+ + + G
Sbjct: 177 EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS--YGLQPYCGY 234
Query: 257 GEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDI 316
Q++V +++++ V P P C + A+ C NE + RP DI
Sbjct: 235 SNQDVVE----MIRNRQ-----VLPC-----PDDCPAWVYALMIECWNEFPSRRPRFKDI 280
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 10/208 (4%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLL 98
E + + +G G FG+V+ G VA+K L +G F+ E ++ L
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 65
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H LV L T + ++ EYM GSL D L P L+ N + +A A G+
Sbjct: 66 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 122
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYC 217
++ + I+RDL++ANIL+ + + K++DFGLA+L + DN + + +
Sbjct: 123 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWT 177
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELIT 245
APE G T+KSD++SFG++L E++T
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 25/290 (8%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G FG+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ +S + +A + +EYL K I+
Sbjct: 78 REPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 132
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 232 DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRC 291
D+++FGV+L E+ T +S G D + L++ P C
Sbjct: 192 DVWAFGVLLWEIAT----YGMSPYPG------------IDPSQVYELLEKDYRMERPEGC 235
Query: 292 LNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRD-SHPVSRNAGARG 340
+ C + RP +I A + + + S V + G RG
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKRG 285
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 133/290 (45%), Gaps = 29/290 (10%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHE-GLQGHQEFIVEVLMLSLL 98
R ++ +GEG FGKV + +G++VA+K L G Q + E+ +L L
Sbjct: 9 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL 68
Query: 99 HHDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAAR 156
+H+++V G C ++ LV EY+P+GSL D+L + + + A
Sbjct: 69 YHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICE 123
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---T 213
G+ YLH + I+R L + N+LLDND K+ DFGLAK P G + + R G
Sbjct: 124 GMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG-HEYYRVREDGDSPV 179
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQK 273
+ Y APE K SD++SFGV L EL+T Q + + Q
Sbjct: 180 FWY-APECLKECKFYYASDVWSFGVTLYELLTY-----CDSNQSPHTKFTELIGHTQGQM 233
Query: 274 KFVHLVDPLLHG-RYPR--RCLNYAVAVTAMCLNEEANFRPLINDIVVAL 320
+ L + L G R PR RC + C EA+FRP ++V L
Sbjct: 234 TVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPIL 283
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 133/290 (45%), Gaps = 29/290 (10%)
Query: 45 RNFREANLIGEGGFGKVYKGRLE-----SGQLVAIKQLNHE-GLQGHQEFIVEVLMLSLL 98
R ++ +GEG FGKV + +G++VA+K L G Q + E+ +L L
Sbjct: 8 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL 67
Query: 99 HHDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAAR 156
+H+++V G C ++ LV EY+P+GSL D+L + + + A
Sbjct: 68 YHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICE 122
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---T 213
G+ YLH + I+R L + N+LLDND K+ DFGLAK P G + + R G
Sbjct: 123 GMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG-HEYYRVREDGDSPV 178
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQK 273
+ Y APE K SD++SFGV L EL+T Q + + Q
Sbjct: 179 FWY-APECLKECKFYYASDVWSFGVTLYELLTY-----CDSNQSPHTKFTELIGHTQGQM 232
Query: 274 KFVHLVDPLLHG-RYPR--RCLNYAVAVTAMCLNEEANFRPLINDIVVAL 320
+ L + L G R PR RC + C EA+FRP ++V L
Sbjct: 233 TVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPIL 282
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 109/203 (53%), Gaps = 17/203 (8%)
Query: 53 IGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+GEG FGKV R + +G+ VA+K L E H + E+ +L L+H+N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 107 IGYCTS--GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
G CT G+ L+ E++P GSL+++L ++ ++ ++K AV +G++YL +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 165 ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEYA 222
++RDL + N+L++++ K+ DFGL K T R + Y APE
Sbjct: 134 Q---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 189
Query: 223 MSGKLTLKSDIYSFGVVLLELIT 245
M K + SD++SFGV L EL+T
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 109/203 (53%), Gaps = 17/203 (8%)
Query: 53 IGEGGFGKVYKGRLE-----SGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+GEG FGKV R + +G+ VA+K L E H + E+ +L L+H+N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 107 IGYCTS--GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
G CT G+ L+ E++P GSL+++L ++ ++ ++K AV +G++YL +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 165 ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEYA 222
++RDL + N+L++++ K+ DFGL K T R + Y APE
Sbjct: 146 Q---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 201
Query: 223 MSGKLTLKSDIYSFGVVLLELIT 245
M K + SD++SFGV L EL+T
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLT 224
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 10/208 (4%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLL 98
E + + +G G FG+V+ G VA+K L +G F+ E ++ L
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 71
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H LV L T + ++ EYM GSL D L P L+ N + +A A G+
Sbjct: 72 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 128
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYC 217
++ + I+RDL++ANIL+ + + K++DFGLA+L + DN + +
Sbjct: 129 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWT 183
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELIT 245
APE G T+KSD++SFG++L E++T
Sbjct: 184 APEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 10/208 (4%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLL 98
E + + +G G FG+V+ G VA+K L +G F+ E ++ L
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 74
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H LV L T + ++ EYM GSL D L P L+ N + +A A G+
Sbjct: 75 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 131
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYC 217
++ + I+RDL++ANIL+ + + K++DFGLA+L + DN + +
Sbjct: 132 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWT 186
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELIT 245
APE G T+KSD++SFG++L E++T
Sbjct: 187 APEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 10/208 (4%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLL 98
E + + +G G FG+V+ G VA+K L +G F+ E ++ L
Sbjct: 15 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 73
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H LV L T + ++ EYM GSL D L P L+ N + +A A G+
Sbjct: 74 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 130
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYC 217
++ + I+RDL++ANIL+ + + K++DFGLA+L + DN + +
Sbjct: 131 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWT 185
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELIT 245
APE G T+KSD++SFG++L E++T
Sbjct: 186 APEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 10/208 (4%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLL 98
E + + +G G FG+V+ G VA+K L +G F+ E ++ L
Sbjct: 9 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 67
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H LV L T + ++ EYM GSL D L P L+ N + +A A G+
Sbjct: 68 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 124
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYC 217
++ + I+RDL++ANIL+ + + K++DFGLA+L + DN + +
Sbjct: 125 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWT 179
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELIT 245
APE G T+KSD++SFG++L E++T
Sbjct: 180 APEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 10/208 (4%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLL 98
E + + +G G FG+V+ G VA+K L +G F+ E ++ L
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 65
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H LV L T + ++ EYM GSL D L P L+ N + +A A G+
Sbjct: 66 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 122
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYC 217
++ + I+RDL++ANIL+ + + K++DFGLA+L + DN + +
Sbjct: 123 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWT 177
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELIT 245
APE G T+KSD++SFG++L E++T
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 10/208 (4%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLL 98
E + + +G G FG+V+ G VA+K L +G F+ E ++ L
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 66
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H LV L T + ++ EYM GSL D L P L+ N + +A A G+
Sbjct: 67 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 123
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYC 217
++ + I+RDL++ANIL+ + + K++DFGLA+L + DN + +
Sbjct: 124 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWT 178
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELIT 245
APE G T+KSD++SFG++L E++T
Sbjct: 179 APEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 12/209 (5%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLL 98
E + + +G G FG+V+ G VA+K L +G F+ E ++ L
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 65
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H LV L T + ++ EYM GSL D L P L+ N + +A A G+
Sbjct: 66 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 122
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GY 216
++ + I+RDL++ANIL+ + + K++DFGLA+L + DN + R + +
Sbjct: 123 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL--IEDN-EXTAREGAKFPIKW 176
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
APE G T+KSD++SFG++L E++T
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 98/208 (47%), Gaps = 18/208 (8%)
Query: 53 IGEGGFGKVYKGRL------ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL 106
+GEG FGKV+ + LVA+K L ++F E +L+ L H+++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 107 IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQ---------EPLSWNTRMKIAVGAARG 157
G C GD ++V+EYM G L L PD L+ + + IA A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
+ YL A+ ++RDL + N L+ + K+ DFG+++ D V M +
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELIT 245
PE M K T +SD++S GVVL E+ T
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
I + ++G G FG V K + + VAIKQ+ E + + FIVE+ LS ++H
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLSRVNHP 62
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTR---MKIAVGAARGL 158
N+V L G C + LV EY GSL Y++ EPL + T M + ++G+
Sbjct: 63 NIVKLYGACL--NPVCLVMEYAEGGSL----YNVLHGAEPLPYYTAAHAMSWCLQCSQGV 116
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
YLH +I+RDLK N+LL K+ DFG A TH+ T G+ +
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWM 171
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITGRKAMD 251
APE + K D++S+G++L E+IT RK D
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
I + ++G G FG V K + + VAIKQ+ E + + FIVE+ LS ++H
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLSRVNHP 61
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTR---MKIAVGAARGL 158
N+V L G C + LV EY GSL Y++ EPL + T M + ++G+
Sbjct: 62 NIVKLYGACL--NPVCLVMEYAEGGSL----YNVLHGAEPLPYYTAAHAMSWCLQCSQGV 115
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
YLH +I+RDLK N+LL K+ DFG A TH+ T G+ +
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWM 170
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITGRKAMD 251
APE + K D++S+G++L E+IT RK D
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 10/208 (4%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLL 98
E + + +G G FG+V+ G VA+K L +G F+ E ++ L
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 61
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H LV L T + ++ EYM GSL D L P L+ N + +A A G+
Sbjct: 62 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGM 118
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYC 217
++ + I+R+L++ANIL+ + + K++DFGLA+L + DN + + +
Sbjct: 119 AFIEERN---YIHRNLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWT 173
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELIT 245
APE G T+KSD++SFG++L E++T
Sbjct: 174 APEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 136/289 (47%), Gaps = 35/289 (12%)
Query: 51 NLIGEGGFGKVYKGRLESGQ-----LVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLV 104
+IG G FG+VYKG L++ VAIK L + + +F+ E ++ H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
L G + +++ EYM G+L+ L + + + L ++ G A G++YL
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKYL--- 163
Query: 165 ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEY 221
AN ++RDL + NIL++++ K+SDFGL+++ + D+ + G + APE
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV--LEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 222 AMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVD 280
K T SD++SFG+V+ E++T GE RP+ + + + ++
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMT----------YGE-------RPYWELSNHEVMKAIN 264
Query: 281 PLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDS 329
P C + + C +E RP DIV LD L+ DS
Sbjct: 265 DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 8/194 (4%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
+V EYMP G+L D+L E ++E ++ + +A + +EYL K I+
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYL--RECNREEVTAVVLLYMATQISSAMEYLEKKN---FIH 153
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE ++KS
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 232 DIYSFGVVLLELIT 245
D+++FGV+L E+ T
Sbjct: 213 DVWAFGVLLWEIAT 226
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 127/295 (43%), Gaps = 43/295 (14%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVT 105
+G+G FG VY+G + E+ VA+K +N L+ EF+ E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE------PLSWNTRMKIAVGAARGLE 159
L+G + G L+V E M G L+ +L L P+ E P + +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
YL+ K ++RDL + N ++ +DF K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E G T SD++SFGVVL E IT EQ L KFV
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL------------KFV--- 245
Query: 280 DPLLHGRY---PRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHP 331
+ G Y P C + MC RP +IV L + D HP
Sbjct: 246 ---MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL-----KDDLHP 292
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 124/273 (45%), Gaps = 31/273 (11%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G G FG+V+ G + VA+K L G Q F+ E ++ L HD LV L T
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
+ ++ E+M GSL D L E + L + + A G+ Y+ K I+R
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERKN---YIHR 133
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKS 231
DL++AN+L+ K++DFGLA++ + DN + + + APE G T+KS
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 232 DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHG-RYPR- 289
+++SFG++L E++T K G N ++ L G R PR
Sbjct: 192 NVWSFGILLYEIVTYGKI----PYPGRTN---------------ADVMSALSQGYRMPRM 232
Query: 290 -RCLNYAVAVTAMCLNEEANFRPLINDIVVALD 321
C + + MC E+A RP + + LD
Sbjct: 233 ENCPDELYDIMKMCWKEKAEERPTFDYLQSVLD 265
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 108/205 (52%), Gaps = 10/205 (4%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
I + R +G+G FG+V+ G VAIK L G + F+ E ++ L H+
Sbjct: 8 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHE 66
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L S + +V EYM GSL D L + L + +A A G+ Y+
Sbjct: 67 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYV 123
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPE 220
+ N ++RDL++ANIL+ + K++DFGLA+L + DN + + + + APE
Sbjct: 124 E-RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPE 178
Query: 221 YAMSGKLTLKSDIYSFGVVLLELIT 245
A+ G+ T+KSD++SFG++L EL T
Sbjct: 179 AALYGRFTIKSDVWSFGILLTELTT 203
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 127/295 (43%), Gaps = 43/295 (14%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVT 105
+G+G FG VY+G + E+ VA+K +N L+ EF+ E ++ ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE------PLSWNTRMKIAVGAARGLE 159
L+G + G L+V E M G L+ +L L P+ E P + +++A A G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
YL+ K ++RDL + N ++ +DF K+ DFG+ + D + + + AP
Sbjct: 142 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E G T SD++SFGVVL E IT EQ L KFV
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL------------KFV--- 242
Query: 280 DPLLHGRY---PRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHP 331
+ G Y P C + MC RP +IV L + D HP
Sbjct: 243 ---MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL-----KDDLHP 289
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 133/290 (45%), Gaps = 25/290 (8%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ +S + +A + +EYL K I+
Sbjct: 78 REPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 132
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 232 DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRC 291
D+++FGV+L E+ T +S G D + L++ P C
Sbjct: 192 DVWAFGVLLWEIAT----YGMSPYPG------------IDPSQVYELLEKDYRMERPEGC 235
Query: 292 LNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRD-SHPVSRNAGARG 340
+ C + RP +I A + + + S V + G RG
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKRG 285
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 25/291 (8%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ +S + +A + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 232 DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRC 291
D+++FGV+L E+ T +S G D + L++ P C
Sbjct: 194 DVWAFGVLLWEIAT----YGMSPYPG------------IDLSQVYELLEKDYRMERPEGC 237
Query: 292 LNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRD-SHPVSRNAGARGV 341
+ C + RP +I A + + + S V + G RG
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKRGT 288
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 25/291 (8%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ +S + +A + +EYL K I+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 232 DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRC 291
D+++FGV+L E+ T +S G D + L++ P C
Sbjct: 194 DVWAFGVLLWEIAT----YGMSPYPG------------IDLSQVYELLEKDYRMERPEGC 237
Query: 292 LNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRD-SHPVSRNAGARGV 341
+ C + RP +I A + + + S V + G RG
Sbjct: 238 PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKRGT 288
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 25/291 (8%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ +S + +A + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 232 DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRC 291
D+++FGV+L E+ T +S G D + L++ P C
Sbjct: 199 DVWAFGVLLWEIAT----YGMSPYPG------------IDLSQVYELLEKDYRMERPEGC 242
Query: 292 LNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRD-SHPVSRNAGARGV 341
+ C + RP +I A + + + S V + G RG
Sbjct: 243 PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKRGT 293
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G+G FG+V+ G VAIK L G + F+ E ++ L H+ LV L S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
+ +V EYM GSL D L + L + +A A G+ Y+ + N ++R
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHR 304
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKS 231
DL++ANIL+ + K++DFGLA+L + DN + + + + APE A+ G+ T+KS
Sbjct: 305 DLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 232 DIYSFGVVLLELIT 245
D++SFG++L EL T
Sbjct: 363 DVWSFGILLTELTT 376
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G+G FG+V+ G VAIK L G + F+ E ++ L H+ LV L S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
+ +V EYM GSL D L + L + +A A G+ Y+ + N ++R
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHR 304
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKS 231
DL++ANIL+ + K++DFGLA+L + DN + + + + APE A+ G+ T+KS
Sbjct: 305 DLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 232 DIYSFGVVLLELIT 245
D++SFG++L EL T
Sbjct: 363 DVWSFGILLTELTT 376
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ +S + +A + +EYL K I+
Sbjct: 78 REPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 132
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 232 DIYSFGVVLLELIT 245
D+++FGV+L E+ T
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 108/205 (52%), Gaps = 10/205 (4%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
I + R +G+G FG+V+ G VAIK L G + F+ E ++ L H+
Sbjct: 4 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHE 62
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L S + +V EYM GSL D L + L + +A A G+ Y+
Sbjct: 63 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV 119
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPE 220
+ N ++RDL++ANIL+ + K++DFGLA+L + DN + + + + APE
Sbjct: 120 E-RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPE 174
Query: 221 YAMSGKLTLKSDIYSFGVVLLELIT 245
A+ G+ T+KSD++SFG++L EL T
Sbjct: 175 AALYGRFTIKSDVWSFGILLTELTT 199
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 10/205 (4%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
I + R +G+G FG+V+ G VAIK L G + F+ E ++ L H+
Sbjct: 5 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHE 63
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L S + +V EYM GSL D L + L + +A A G+ Y+
Sbjct: 64 KLVQLYA-VVSEEPIXIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYV 120
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPE 220
+ N ++RDL++ANIL+ + K++DFGLA+L + DN + + + APE
Sbjct: 121 E-RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEXTARQGAKFPIKWTAPE 175
Query: 221 YAMSGKLTLKSDIYSFGVVLLELIT 245
A+ G+ T+KSD++SFG++L EL T
Sbjct: 176 AALYGRFTIKSDVWSFGILLTELTT 200
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ +S + +A + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 232 DIYSFGVVLLELIT 245
D+++FGV+L E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ +S + +A + +EYL K I+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 232 DIYSFGVVLLELIT 245
D+++FGV+L E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 108/205 (52%), Gaps = 10/205 (4%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
I + R +G+G FG+V+ G VAIK L G + F+ E ++ L H+
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHE 73
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L S + +V EYM GSL D L + L + +A A G+ Y+
Sbjct: 74 KLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPE 220
+ N ++RDL++ANIL+ + K++DFGLA+L + DN + + + + APE
Sbjct: 131 E-RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPE 185
Query: 221 YAMSGKLTLKSDIYSFGVVLLELIT 245
A+ G+ T+KSD++SFG++L EL T
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 10/194 (5%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G G FG+V+ VA+K + G + F+ E ++ L HD LV L T
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
+ ++ E+M GSL D L E ++PL + + A G+ ++ + I+R
Sbjct: 82 -EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHR 135
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKS 231
DL++ANIL+ K++DFGLA++ + DN + + + APE G T+KS
Sbjct: 136 DLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 193
Query: 232 DIYSFGVVLLELIT 245
D++SFG++L+E++T
Sbjct: 194 DVWSFGILLMEIVT 207
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 108/205 (52%), Gaps = 10/205 (4%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
I + R +G+G FG+V+ G VAIK L G + F+ E ++ L H+
Sbjct: 6 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHE 64
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L S + +V EYM GSL D L + L + +A A G+ Y+
Sbjct: 65 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV 121
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPE 220
+ N ++RDL++ANIL+ + K++DFGLA+L + DN + + + + APE
Sbjct: 122 E-RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPE 176
Query: 221 YAMSGKLTLKSDIYSFGVVLLELIT 245
A+ G+ T+KSD++SFG++L EL T
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELTT 201
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G+G FG+V+ G VAIK L G + F+ E ++ L H+ LV L S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 332
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
+ +V EYM GSL D L + L + +A A G+ Y+ + N ++R
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHR 387
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKS 231
DL++ANIL+ + K++DFGLA+L + DN + + + + APE A+ G+ T+KS
Sbjct: 388 DLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 445
Query: 232 DIYSFGVVLLELIT 245
D++SFG++L EL T
Sbjct: 446 DVWSFGILLTELTT 459
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 108/205 (52%), Gaps = 10/205 (4%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
I + R +G+G FG+V+ G VAIK L G + F+ E ++ L H+
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHE 73
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L S + +V EYM GSL D L + L + +A A G+ Y+
Sbjct: 74 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPE 220
+ N ++RDL++ANIL+ + K++DFGLA+L + DN + + + + APE
Sbjct: 131 E-RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPE 185
Query: 221 YAMSGKLTLKSDIYSFGVVLLELIT 245
A+ G+ T+KSD++SFG++L EL T
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G+G FG+V+ G VAIK L G + F+ E ++ L H+ LV L S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
+ +V EYM GSL D L + L + +A A G+ Y+ + N ++R
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHR 304
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKS 231
DL++ANIL+ + K++DFGLA+L + DN + + + + APE A+ G+ T+KS
Sbjct: 305 DLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 232 DIYSFGVVLLELIT 245
D++SFG++L EL T
Sbjct: 363 DVWSFGILLTELTT 376
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 108/205 (52%), Gaps = 10/205 (4%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
I + R +G+G FG+V+ G VAIK L G + F+ E ++ L H+
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHE 73
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L S + +V EYM GSL D L + L + +A A G+ Y+
Sbjct: 74 KLVQLYA-VVSEEPIYIVCEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPE 220
+ N ++RDL++ANIL+ + K++DFGLA+L + DN + + + + APE
Sbjct: 131 E-RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPE 185
Query: 221 YAMSGKLTLKSDIYSFGVVLLELIT 245
A+ G+ T+KSD++SFG++L EL T
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 128/295 (43%), Gaps = 43/295 (14%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVT 105
+G+G FG VY+G + E+ VA+K +N L+ EF+ E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE------PLSWNTRMKIAVGAARGLE 159
L+G + G L+V E M G L+ +L L P+ E P + +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
YL+ K ++R+L + N ++ +DF K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E G T SD++SFGVVL E IT EQ L KFV
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL------------KFV--- 245
Query: 280 DPLLHGRY---PRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHP 331
+ G Y P C + MC N RP +IV L + D HP
Sbjct: 246 ---MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL-----KDDLHP 292
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ ++ + +A + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 232 DIYSFGVVLLELIT 245
D+++FGV+L E+ T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 128/295 (43%), Gaps = 43/295 (14%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVT 105
+G+G FG VY+G + E+ VA+K +N L+ EF+ E ++ ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE------PLSWNTRMKIAVGAARGLE 159
L+G + G L+V E M G L+ +L L P+ E P + +++A A G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
YL+ K ++R+L + N ++ +DF K+ DFG+ + D + + + AP
Sbjct: 146 YLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E G T SD++SFGVVL E IT EQ L KFV
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL------------KFV--- 246
Query: 280 DPLLHGRY---PRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHP 331
+ G Y P C + MC N RP +IV L + D HP
Sbjct: 247 ---MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL-----KDDLHP 293
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 108/205 (52%), Gaps = 10/205 (4%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
I + R +G+G FG+V+ G VAIK L G + F+ E ++ L H+
Sbjct: 12 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHE 70
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L S + +V EYM GSL D L + L + ++ A G+ Y+
Sbjct: 71 KLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPE 220
+ N ++RDL++ANIL+ + K++DFGLA+L + DN + + + + APE
Sbjct: 128 E-RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPE 182
Query: 221 YAMSGKLTLKSDIYSFGVVLLELIT 245
A+ G+ T+KSD++SFG++L EL T
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTT 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ ++ + +A + +EYL K I+
Sbjct: 81 REPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 135
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 232 DIYSFGVVLLELIT 245
D+++FGV+L E+ T
Sbjct: 195 DVWAFGVLLWEIAT 208
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ ++ + +A + +EYL K I+
Sbjct: 85 REPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 232 DIYSFGVVLLELIT 245
D+++FGV+L E+ T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ ++ + +A + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 232 DIYSFGVVLLELIT 245
D+++FGV+L E+ T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 127/295 (43%), Gaps = 43/295 (14%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVT 105
+G+G FG VY+G + E+ VA+K +N L+ EF+ E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE------PLSWNTRMKIAVGAARGLE 159
L+G + G L+V E M G L+ +L L P+ E P + +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
YL+ K ++RDL + N ++ +DF K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E G T SD++SFGVVL E IT EQ L KFV
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL------------KFV--- 245
Query: 280 DPLLHGRY---PRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHP 331
+ G Y P C + MC RP +IV L + D HP
Sbjct: 246 ---MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL-----KDDLHP 292
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ ++ + +A + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 232 DIYSFGVVLLELIT 245
D+++FGV+L E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVE 91
E +A + +G+G FG VY+G + E VAIK +N ++ EF+ E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 92 VLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE------PLSWN 145
++ + ++V L+G + G L++ E M G L+ +L L P+ E P S +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 146 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH 205
+++A A G+ YL+ ++RDL + N ++ DF K+ DFG+ + D
Sbjct: 133 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 189
Query: 206 VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ + + +PE G T SD++SFGVVL E+ T
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVE 91
E +A + +G+G FG VY+G + E VAIK +N ++ EF+ E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 92 VLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE------PLSWN 145
++ + ++V L+G + G L++ E M G L+ +L L P+ E P S +
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 146 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH 205
+++A A G+ YL+ ++RDL + N ++ DF K+ DFG+ + D
Sbjct: 124 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 206 VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ + + +PE G T SD++SFGVVL E+ T
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 108/205 (52%), Gaps = 10/205 (4%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
I + R +G+G FG+V+ G VAIK L G + F+ E ++ + H+
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKIRHE 73
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L S + +V EYM GSL D L + L + +A A G+ Y+
Sbjct: 74 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPE 220
+ N ++RDL++ANIL+ + K++DFGLA+L + DN + + + + APE
Sbjct: 131 E-RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPE 185
Query: 221 YAMSGKLTLKSDIYSFGVVLLELIT 245
A+ G+ T+KSD++SFG++L EL T
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 10/205 (4%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
I + R +G+G FG+V+ G VAIK L G + F+ E ++ L H+
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHE 73
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L S + +V EYM GSL D L + L + +A A G+ Y+
Sbjct: 74 KLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPE 220
+ N ++RDL++ANIL+ + K++DFGLA+L + DN + + + APE
Sbjct: 131 E-RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEXTARQGAKFPIKWTAPE 185
Query: 221 YAMSGKLTLKSDIYSFGVVLLELIT 245
A+ G+ T+KSD++SFG++L EL T
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ ++ + +A + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 232 DIYSFGVVLLELIT 245
D+++FGV+L E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ ++ + +A + +EYL K I+
Sbjct: 84 REPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 138
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 232 DIYSFGVVLLELIT 245
D+++FGV+L E+ T
Sbjct: 198 DVWAFGVLLWEIAT 211
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ ++ + +A + +EYL K I+
Sbjct: 81 REPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 135
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 232 DIYSFGVVLLELIT 245
D+++FGV+L E+ T
Sbjct: 195 DVWAFGVLLWEIAT 208
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 127/295 (43%), Gaps = 43/295 (14%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVT 105
+G+G FG VY+G + E+ VA+K +N L+ EF+ E ++ ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE------PLSWNTRMKIAVGAARGLE 159
L+G + G L+V E M G L+ +L L P+ E P + +++A A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
YL+ K ++RDL + N ++ +DF K+ DFG+ + D + + + AP
Sbjct: 144 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E G T SD++SFGVVL E IT EQ L KFV
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL------------KFV--- 244
Query: 280 DPLLHGRY---PRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHP 331
+ G Y P C + MC RP +IV L + D HP
Sbjct: 245 ---MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL-----KDDLHP 291
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 10/205 (4%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
I + R +G+G FG+V+ G VAIK L G + F+ E ++ L H+
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHE 73
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L S + +V EYM GSL D L + L + +A A G+ Y+
Sbjct: 74 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPE 220
+ N ++RDL +ANIL+ + K++DFGLA+L + DN + + + + APE
Sbjct: 131 E-RMN--YVHRDLAAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPE 185
Query: 221 YAMSGKLTLKSDIYSFGVVLLELIT 245
A+ G+ T+KSD++SFG++L EL T
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ ++ + +A + +EYL K I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 136
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 232 DIYSFGVVLLELIT 245
D+++FGV+L E+ T
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 134/291 (46%), Gaps = 25/291 (8%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ ++ + +A + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 232 DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRC 291
D+++FGV+L E+ T +S G D + L++ P C
Sbjct: 199 DVWAFGVLLWEIAT----YGMSPYPG------------IDLSQVYELLEKDYRMERPEGC 242
Query: 292 LNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRD-SHPVSRNAGARGV 341
+ C + RP +I A + + + S V + G +GV
Sbjct: 243 PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKQGV 293
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ ++ + +A + +EYL K I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 136
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 232 DIYSFGVVLLELIT 245
D+++FGV+L E+ T
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ ++ + +A + +EYL K I+
Sbjct: 93 REPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 147
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 232 DIYSFGVVLLELIT 245
D+++FGV+L E+ T
Sbjct: 207 DVWAFGVLLWEIAT 220
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ ++ + +A + +EYL K I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 136
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RDL + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 232 DIYSFGVVLLELIT 245
D+++FGV+L E+ T
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 10/194 (5%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G G FG+V+ VA+K + G + F+ E ++ L HD LV L T
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
+ ++ E+M GSL D L E ++PL + + A G+ ++ + I+R
Sbjct: 255 -EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHR 308
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKS 231
DL++ANIL+ K++DFGLA++ + DN + + + APE G T+KS
Sbjct: 309 DLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 366
Query: 232 DIYSFGVVLLELIT 245
D++SFG++L+E++T
Sbjct: 367 DVWSFGILLMEIVT 380
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 107/205 (52%), Gaps = 10/205 (4%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
I + R +G+G FG+V+ G VAIK L G + F+ E ++ L H+
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHE 73
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L S + +V EYM G L D L + L + +A A G+ Y+
Sbjct: 74 KLVQLYA-VVSEEPIYIVMEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPE 220
+ N ++RDL++ANIL+ + K++DFGLA+L + DN + + + + APE
Sbjct: 131 E-RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPE 185
Query: 221 YAMSGKLTLKSDIYSFGVVLLELIT 245
A+ G+ T+KSD++SFG++L EL T
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 107/205 (52%), Gaps = 10/205 (4%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
I + R +G+G FG+V+ G VAIK L G + F+ E ++ L H+
Sbjct: 12 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHE 70
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L S + +V EYM GSL D L + L + ++ A G+ Y+
Sbjct: 71 KLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPE 220
+ N ++RDL++ANIL+ + K++DFGLA+L + DN + + + APE
Sbjct: 128 E-RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEWTARQGAKFPIKWTAPE 182
Query: 221 YAMSGKLTLKSDIYSFGVVLLELIT 245
A+ G+ T+KSD++SFG++L EL T
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTT 207
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 25/291 (8%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ +S + +A + +EYL K I+
Sbjct: 287 REPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 341
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
R+L + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
Query: 232 DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRC 291
D+++FGV+L E+ T +S G D + L++ P C
Sbjct: 401 DVWAFGVLLWEIAT----YGMSPYPG------------IDLSQVYELLEKDYRMERPEGC 444
Query: 292 LNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRD-SHPVSRNAGARGV 341
+ C + RP +I A + + + S V + G RG
Sbjct: 445 PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKRGT 495
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 107/205 (52%), Gaps = 10/205 (4%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
I + R +G+G FG+V+ G VAIK L G + F+ E ++ L H+
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHE 73
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L S + +V EYM G L D L + L + +A A G+ Y+
Sbjct: 74 KLVQLYA-VVSEEPIYIVTEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPE 220
+ N ++RDL++ANIL+ + K++DFGLA+L + DN + + + + APE
Sbjct: 131 E-RMN--YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPE 185
Query: 221 YAMSGKLTLKSDIYSFGVVLLELIT 245
A+ G+ T+KSD++SFG++L EL T
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 128/300 (42%), Gaps = 53/300 (17%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVEVLMLSLLHHDNLVT 105
+G+G FG VY+G + E+ VA+K +N L+ EF+ E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE------PLSWNTRMKIAVGAARGLE 159
L+G + G L+V E M G L+ +L L P+ E P + +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG---- 215
YL+ K ++RDL + N ++ +DF K+ DFG+ + D + G G
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIYETAYYRKGGKGLLPV 196
Query: 216 -YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKK 274
+ APE G T SD++SFGVVL E IT EQ L K
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL------------K 243
Query: 275 FVHLVDPLLHGRY---PRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHP 331
FV + G Y P C + MC RP +IV L + D HP
Sbjct: 244 FV------MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL-----KDDLHP 292
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 16/224 (7%)
Query: 35 FTFRELAIATRNFREANLIGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQE 87
F E +A + +G+G FG VY+G + E VAIK +N ++ E
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 88 FIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE------P 141
F+ E ++ + ++V L+G + G L++ E M G L+ +L L P+ E P
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 125
Query: 142 LSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVG 201
S + +++A A G+ YL+ ++RDL + N ++ DF K+ DFG+ +
Sbjct: 126 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 182
Query: 202 DNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
D + + + +PE G T SD++SFGVVL E+ T
Sbjct: 183 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 101/195 (51%), Gaps = 12/195 (6%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G G G+V+ G VA+K L +G F+ E ++ L H LV L T
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
+ ++ EYM GSL D L P L+ N + +A A G+ ++ + I+R
Sbjct: 80 -EPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 133
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAMSGKLTLK 230
DL++ANIL+ + + K++DFGLA+L ++ + R + + APE G T+K
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARL---IEDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 231 SDIYSFGVVLLELIT 245
SD++SFG++L E++T
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVE 91
E +A + +G+G FG VY+G + E VAIK +N ++ EF+ E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 92 VLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE------PLSWN 145
++ + ++V L+G + G L++ E M G L+ +L L P+ E P S +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 146 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH 205
+++A A G+ YL+ ++RDL + N ++ DF K+ DFG+ + D
Sbjct: 126 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 206 VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ + + +PE G T SD++SFGVVL E+ T
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVE 91
E +A + +G+G FG VY+G + E VAIK +N ++ EF+ E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 92 VLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE------PLSWN 145
++ + ++V L+G + G L++ E M G L+ +L L P+ E P S +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 146 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH 205
+++A A G+ YL+ ++RDL + N ++ DF K+ DFG+ + D
Sbjct: 132 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 206 VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ + + +PE G T SD++SFGVVL E+ T
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVE 91
E +A + +G+G FG VY+G + E VAIK +N ++ EF+ E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 92 VLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE------PLSWN 145
++ + ++V L+G + G L++ E M G L+ +L L P+ E P S +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 146 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH 205
+++A A G+ YL+ ++RDL + N ++ DF K+ DFG+ + D
Sbjct: 133 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 189
Query: 206 VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ + + +PE G T SD++SFGVVL E+ T
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 113/243 (46%), Gaps = 47/243 (19%)
Query: 46 NFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVE--VLMLSLLHHDNL 103
N + LIG G +G VYKG L+ + VA+K + Q FI E + + L+ HDN+
Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDE-RPVAVKVFS---FANRQNFINEKNIYRVPLMEHDNI 69
Query: 104 VTLIGYCTSGDQR---------LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGA 154
I GD+R LLV EY P GSL +L D W + ++A
Sbjct: 70 ARFI----VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD-----WVSSCRLAHSV 120
Query: 155 ARGLEYLHCKA------NPPVIYRDLKSANILLDNDFNPKLSDFGLA------KLGPVGD 202
RGL YLH + P + +RDL S N+L+ ND +SDFGL+ +L G+
Sbjct: 121 TRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGE 180
Query: 203 NTHVSTRVMGTYGYCAPEYAMSGKLTLKS--------DIYSFGVVLLELITGRKAMDLSK 254
+ + +GT Y APE + G + L+ D+Y+ G++ E+ + DL
Sbjct: 181 EDNAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIFM--RCTDLFP 237
Query: 255 GQG 257
G+
Sbjct: 238 GES 240
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVE 91
E +A + +G+G FG VY+G + E VAIK +N ++ EF+ E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 92 VLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE------PLSWN 145
++ + ++V L+G + G L++ E M G L+ +L L P+ E P S +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 146 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH 205
+++A A G+ YL+ ++RDL + N ++ DF K+ DFG+ + D
Sbjct: 132 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 206 VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ + + +PE G T SD++SFGVVL E+ T
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVE 91
E +A + +G+G FG VY+G + E VAIK +N ++ EF+ E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 92 VLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE------PLSWN 145
++ + ++V L+G + G L++ E M G L+ +L L P+ E P S +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 138
Query: 146 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH 205
+++A A G+ YL+ ++RDL + N ++ DF K+ DFG+ + D
Sbjct: 139 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 195
Query: 206 VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ + + +PE G T SD++SFGVVL E+ T
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVE 91
E +A + +G+G FG VY+G + E VAIK +N ++ EF+ E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 92 VLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE------PLSWN 145
++ + ++V L+G + G L++ E M G L+ +L L P+ E P S +
Sbjct: 101 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 160
Query: 146 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH 205
+++A A G+ YL+ ++RDL + N ++ DF K+ DFG+ + D
Sbjct: 161 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 217
Query: 206 VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ + + +PE G T SD++SFGVVL E+ T
Sbjct: 218 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 134/289 (46%), Gaps = 44/289 (15%)
Query: 52 LIGEGGFGKVYKGRL--ESGQLV--AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+IG G FG VY G L G+ + A+K LN G +F+ E +++ H N+++L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 107 IGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG----AARGLEYL 161
+G C S L+V YM G L + + + + N +K +G A+G+++L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKGMKFL 150
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 219
A+ ++RDL + N +LD F K++DFGLA+ L D+ H T + A
Sbjct: 151 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMAL 207
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E + K T KSD++SFGV+L EL+T R A P D F +
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMT-RGA-----------------PPYPDVNTF-DIT 248
Query: 280 DPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
LL GR P C + V C + +A RP +++V + + S
Sbjct: 249 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 297
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 13/197 (6%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IG+G G VY + +GQ VAI+Q+N + + I E+L++ + N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
GD+ +V EY+ GSL D + + D+ ++ R + LE+LH VI+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQ---VIH 139
Query: 172 RDLKSANILLDNDFNPKLSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK 230
RD+KS NILL D + KL+DFG A++ P + + ST V GT + APE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGPK 196
Query: 231 SDIYSFGVVLLELITGR 247
DI+S G++ +E+I G
Sbjct: 197 VDIWSLGIMAIEMIEGE 213
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G+G FG+V+ G VAIK L G + F+ E ++ L H+ LV L S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGNMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 250
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
+ +V EYM GSL D L + L + +A A G+ Y+ + N ++R
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE-RMN--YVHR 305
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKS 231
DL++ANIL+ + K++DFGL +L + DN + + + + APE A+ G+ T+KS
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 363
Query: 232 DIYSFGVVLLELIT 245
D++SFG++L EL T
Sbjct: 364 DVWSFGILLTELTT 377
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ ++ + +A + +EYL K I+
Sbjct: 326 REPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 380
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
R+L + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
Query: 232 DIYSFGVVLLELIT 245
D+++FGV+L E+ T
Sbjct: 440 DVWAFGVLLWEIAT 453
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 24/196 (12%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G G FG+V+ VA+K + G + F+ E ++ L HD LV L T
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
+ ++ E+M GSL D L E ++PL + + A G+ ++ + I+R
Sbjct: 249 -EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHR 302
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLG---PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL 229
DL++ANIL+ K++DFGLA++G P+ + APE G T+
Sbjct: 303 DLRAANILVSASLVCKIADFGLARVGAKFPIK--------------WTAPEAINFGSFTI 348
Query: 230 KSDIYSFGVVLLELIT 245
KSD++SFG++L+E++T
Sbjct: 349 KSDVWSFGILLMEIVT 364
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 53 IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G+VY+G + L VA+K L + ++ +EF+ E ++ + H NLV L+G CT
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ E+M G+L D+L E +++ ++ + +A + +EYL K I+
Sbjct: 284 REPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIH 338
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
R+L + N L+ + K++DFGL++L GD + APE K ++KS
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 397
Query: 232 DIYSFGVVLLELIT 245
D+++FGV+L E+ T
Sbjct: 398 DVWAFGVLLWEIAT 411
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 138/301 (45%), Gaps = 47/301 (15%)
Query: 51 NLIGEGGFGKVYKGRLESGQL---VAIKQLN-HEGLQGHQEFIVEVLMLSLL-HHDNLVT 105
++IGEG FG+V K R++ L AIK++ + H++F E+ +L L HH N++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYD---LEPD---------QEPLSWNTRMKIAVG 153
L+G C L EY P G+L D L LE D LS + A
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 154 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
ARG++YL K I+RDL + NIL+ ++ K++DFGL++ G +V + MG
Sbjct: 151 VARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGR 202
Query: 214 --YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT--GRKAMDLSKGQGEQNLVSWSRPFL 269
+ A E T SD++S+GV+L E+++ G ++ + + L R
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR--- 259
Query: 270 KDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDS 329
L PL C + + C E+ RP I+V+L+ ++ +R +
Sbjct: 260 --------LEKPL-------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304
Query: 330 H 330
+
Sbjct: 305 Y 305
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVE 91
E +A + +G+G FG VY+G + E VAIK +N ++ EF+ E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 92 VLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE------PLSWN 145
++ + ++V L+G + G L++ E M G L+ +L L P+ E P S +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 146 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH 205
+++A A G+ YL+ ++RDL + N + DF K+ DFG+ + D
Sbjct: 126 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 206 VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ + + +PE G T SD++SFGVVL E+ T
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 138/301 (45%), Gaps = 47/301 (15%)
Query: 51 NLIGEGGFGKVYKGRLESGQL---VAIKQLN-HEGLQGHQEFIVEVLMLSLL-HHDNLVT 105
++IGEG FG+V K R++ L AIK++ + H++F E+ +L L HH N++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYD---LEPD---------QEPLSWNTRMKIAVG 153
L+G C L EY P G+L D L LE D LS + A
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 154 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
ARG++YL K I+RDL + NIL+ ++ K++DFGL++ G +V + MG
Sbjct: 141 VARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGR 192
Query: 214 --YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT--GRKAMDLSKGQGEQNLVSWSRPFL 269
+ A E T SD++S+GV+L E+++ G ++ + + L R
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR--- 249
Query: 270 KDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDS 329
L PL C + + C E+ RP I+V+L+ ++ +R +
Sbjct: 250 --------LEKPL-------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 294
Query: 330 H 330
+
Sbjct: 295 Y 295
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 15/213 (7%)
Query: 39 ELAIATRNFRE--ANLI--GEGGFGKV-YKGRLESGQLVAIKQLNHEGLQGHQEFIVEVL 93
+L ++ + RE AN I GEG G V +G+ VA+K+++ Q + EV+
Sbjct: 35 QLVVSPGDPREYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVV 94
Query: 94 MLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG 153
++ HHDN+V + GD+ +V E++ G+L D + ++E ++ + +
Sbjct: 95 IMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLS 149
Query: 154 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
R L YLH N VI+RD+KS +ILL +D KLSDFG V ++GT
Sbjct: 150 VLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFC--AQVSKEVPKRKXLVGT 204
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
+ APE + DI+S G++++E+I G
Sbjct: 205 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEF---IVEVLM 94
++ + +F ++G+G FGKV+ + + Q AIK L + + + +VE +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 95 LSLLHHDNLVTLIGYCT--SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 152
LSL +T + +CT + + V EY+ G L H+ + A
Sbjct: 72 LSLAWEHPFLTHM-FCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----FDLSRATFYAA 126
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG 212
GL++LH K ++YRDLK NILLD D + K++DFG+ K +GD + G
Sbjct: 127 EIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEFCG 181
Query: 213 TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNL 261
T Y APE + K D +SFGV+L E++ G+ GQ E+ L
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF---HGQDEEEL 227
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 13/197 (6%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IG+G G VY + +GQ VAI+Q+N + + I E+L++ + N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
GD+ +V EY+ GSL D + + D+ ++ R + LE+LH VI+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQ---VIH 139
Query: 172 RDLKSANILLDNDFNPKLSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK 230
RD+KS NILL D + KL+DFG A++ P + ++GT + APE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITP---EQSKRSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 231 SDIYSFGVVLLELITGR 247
DI+S G++ +E+I G
Sbjct: 197 VDIWSLGIMAIEMIEGE 213
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+GEG +G VYK E+GQ+VAIKQ+ E QE I E+ ++ ++V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
+V EY GS+ D + + L+ + I +GLEYLH I+
Sbjct: 95 KNTDLWIVMEYCGAGSVSDII---RLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IH 148
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RD+K+ NILL+ + + KL+DFG+A G + D V+GT + APE +
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 232 DIYSFGVVLLELITGR 247
DI+S G+ +E+ G+
Sbjct: 207 DIWSLGITAIEMAEGK 222
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 104/197 (52%), Gaps = 13/197 (6%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IG+G G VY + +GQ VAI+Q+N + + I E+L++ + N+V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
GD+ +V EY+ GSL D + + D+ ++ R + LE+LH VI+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQ---VIH 140
Query: 172 RDLKSANILLDNDFNPKLSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK 230
R++KS NILL D + KL+DFG A++ P + + ST V GT + APE K
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGPK 197
Query: 231 SDIYSFGVVLLELITGR 247
DI+S G++ +E+I G
Sbjct: 198 VDIWSLGIMAIEMIEGE 214
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 13/197 (6%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IG+G G VY + +GQ VAI+Q+N + + I E+L++ + N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
GD+ +V EY+ GSL D + + D+ ++ R + LE+LH VI+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQ---VIH 139
Query: 172 RDLKSANILLDNDFNPKLSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK 230
RD+KS NILL D + KL+DFG A++ P + ++GT + APE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITP---EQSKRSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 231 SDIYSFGVVLLELITGR 247
DI+S G++ +E+I G
Sbjct: 197 VDIWSLGIMAIEMIEGE 213
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 133/289 (46%), Gaps = 44/289 (15%)
Query: 52 LIGEGGFGKVYKGRL--ESGQLV--AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+IG G FG VY G L G+ + A+K LN G +F+ E +++ H N+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 107 IGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG----AARGLEYL 161
+G C S L+V YM G L + + + + N +K +G A+G+++L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKGMKFL 149
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 219
A+ ++RDL + N +LD F K++DFGLA+ D+ H T + A
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E + K T KSD++SFGV+L EL+T R A P D F +
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT-RGA-----------------PPYPDVNTF-DIT 247
Query: 280 DPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
LL GR P C + V C + +A RP +++V + + S
Sbjct: 248 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 13/197 (6%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IG+G G VY + +GQ VAI+Q+N + + I E+L++ + N+V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
GD+ +V EY+ GSL D + + D+ ++ R + LE+LH VI+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQ---VIH 140
Query: 172 RDLKSANILLDNDFNPKLSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK 230
RD+KS NILL D + KL+DFG A++ P + ++GT + APE K
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITP---EQSKRSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 231 SDIYSFGVVLLELITGR 247
DI+S G++ +E+I G
Sbjct: 198 VDIWSLGIMAIEMIEGE 214
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 133/289 (46%), Gaps = 44/289 (15%)
Query: 52 LIGEGGFGKVYKGRL--ESGQLV--AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+IG G FG VY G L G+ + A+K LN G +F+ E +++ H N+++L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 107 IGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG----AARGLEYL 161
+G C S L+V YM G L + + + + N +K +G A+G+++L
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKGMKFL 208
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 219
A+ ++RDL + N +LD F K++DFGLA+ D+ H T + A
Sbjct: 209 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 265
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E + K T KSD++SFGV+L EL+T R A P D F +
Sbjct: 266 ESLQTQKFTTKSDVWSFGVLLWELMT-RGA-----------------PPYPDVNTF-DIT 306
Query: 280 DPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
LL GR P C + V C + +A RP +++V + + S
Sbjct: 307 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 133/289 (46%), Gaps = 44/289 (15%)
Query: 52 LIGEGGFGKVYKGRL--ESGQLV--AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+IG G FG VY G L G+ + A+K LN G +F+ E +++ H N+++L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 107 IGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG----AARGLEYL 161
+G C S L+V YM G L + + + + N +K +G A+G+++L
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKGMKFL 147
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 219
A+ ++RDL + N +LD F K++DFGLA+ D+ H T + A
Sbjct: 148 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 204
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E + K T KSD++SFGV+L EL+T R A P D F +
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMT-RGA-----------------PPYPDVNTF-DIT 245
Query: 280 DPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
LL GR P C + V C + +A RP +++V + + S
Sbjct: 246 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 294
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 133/289 (46%), Gaps = 44/289 (15%)
Query: 52 LIGEGGFGKVYKGRL--ESGQLV--AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+IG G FG VY G L G+ + A+K LN G +F+ E +++ H N+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 107 IGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG----AARGLEYL 161
+G C S L+V YM G L + + + + N +K +G A+G+++L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKGMKFL 149
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 219
A+ ++RDL + N +LD F K++DFGLA+ D+ H T + A
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E + K T KSD++SFGV+L EL+T R A P D F +
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT-RGA-----------------PPYPDVNTF-DIT 247
Query: 280 DPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
LL GR P C + V C + +A RP +++V + + S
Sbjct: 248 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 133/289 (46%), Gaps = 44/289 (15%)
Query: 52 LIGEGGFGKVYKGRL--ESGQLV--AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+IG G FG VY G L G+ + A+K LN G +F+ E +++ H N+++L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 107 IGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG----AARGLEYL 161
+G C S L+V YM G L + + + + N +K +G A+G+++L
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKGMKFL 154
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 219
A+ ++RDL + N +LD F K++DFGLA+ D+ H T + A
Sbjct: 155 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 211
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E + K T KSD++SFGV+L EL+T R A P D F +
Sbjct: 212 ESLQTQKFTTKSDVWSFGVLLWELMT-RGA-----------------PPYPDVNTF-DIT 252
Query: 280 DPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
LL GR P C + V C + +A RP +++V + + S
Sbjct: 253 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 301
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 133/289 (46%), Gaps = 44/289 (15%)
Query: 52 LIGEGGFGKVYKGRL--ESGQLV--AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+IG G FG VY G L G+ + A+K LN G +F+ E +++ H N+++L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 107 IGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG----AARGLEYL 161
+G C S L+V YM G L + + + + N +K +G A+G+++L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKGMKFL 150
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 219
A+ ++RDL + N +LD F K++DFGLA+ D+ H T + A
Sbjct: 151 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 207
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E + K T KSD++SFGV+L EL+T R A P D F +
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMT-RGA-----------------PPYPDVNTF-DIT 248
Query: 280 DPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
LL GR P C + V C + +A RP +++V + + S
Sbjct: 249 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 297
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 30/220 (13%)
Query: 53 IGEGGFGKVYKGR------LESGQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVT 105
IGEG FG+V++ R E +VA+K L E Q +F E +++ + N+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQ--------------------EPLSWN 145
L+G C G L++EYM G L + L + P PLS
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 146 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH 205
++ IA A G+ YL + ++RDL + N L+ + K++DFGL++ D
Sbjct: 175 EQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 206 VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ PE + T +SD++++GVVL E+ +
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 35/220 (15%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + VA+K L + + + I E+ M+ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP------------DQEPLSWNTRMKI 150
++ L+G CT ++ EY G+L ++L EP +E LS +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
A ARG+EYL K I+RDL + N+L+ D K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 211 MGTYG-----YCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
T G + APE T +SD++SFGV+L E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEF---IVEVLM 94
++ + +F ++G+G FGKV+ + + Q AIK L + + + +VE +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 95 LSLLHHDNLVTLIGYCT--SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 152
LSL +T + +CT + + V EY+ G L H+ + A
Sbjct: 71 LSLAWEHPFLTHM-FCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----FDLSRATFYAA 125
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG 212
GL++LH K ++YRDLK NILLD D + K++DFG+ K +GD + G
Sbjct: 126 EIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFCG 180
Query: 213 TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNL 261
T Y APE + K D +SFGV+L E++ G+ GQ E+ L
Sbjct: 181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF---HGQDEEEL 226
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 10/194 (5%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G G FG V G+ VAIK + EG EFI E ++ L H+ LV L G CT
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
++ EYM G L ++L ++ + +++ +EYL K ++R
Sbjct: 76 QRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHR 129
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAMSGKLTLKS 231
DL + N L+++ K+SDFGL++ V D+ + S+R + PE M K + KS
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 232 DIYSFGVVLLELIT 245
DI++FGV++ E+ +
Sbjct: 188 DIWAFGVLMWEIYS 201
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 138/301 (45%), Gaps = 47/301 (15%)
Query: 51 NLIGEGGFGKVYKGRLESGQL---VAIKQLN-HEGLQGHQEFIVEVLMLSLL-HHDNLVT 105
++IGEG FG+V K R++ L AIK++ + H++F E+ +L L HH N++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYD---LEPD---------QEPLSWNTRMKIAVG 153
L+G C L EY P G+L D L LE D LS + A
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 154 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
ARG++YL K I+R+L + NIL+ ++ K++DFGL++ G +V + MG
Sbjct: 148 VARGMDYLSQKQ---FIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGR 199
Query: 214 --YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT--GRKAMDLSKGQGEQNLVSWSRPFL 269
+ A E T SD++S+GV+L E+++ G ++ + + L R
Sbjct: 200 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR--- 256
Query: 270 KDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDS 329
L PL C + + C E+ RP I+V+L+ ++ +R +
Sbjct: 257 --------LEKPL-------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 301
Query: 330 H 330
+
Sbjct: 302 Y 302
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 44/289 (15%)
Query: 52 LIGEGGFGKVYKGRL--ESGQLV--AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+IG G FG VY G L G+ + A+K LN G +F+ E +++ H N+++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 107 IGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG----AARGLEYL 161
+G C S L+V YM G L + + + + N +K +G A+G++YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKGMKYL 148
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 219
A+ ++RDL + N +LD F K++DFGLA+ + H T + A
Sbjct: 149 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMAL 205
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E + K T KSD++SFGV+L EL+T R A P D F +
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMT-RGA-----------------PPYPDVNTF-DIT 246
Query: 280 DPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
LL GR P C + V C + +A RP +++V + + S
Sbjct: 247 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 295
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + VA+K L + + + I E+ M+ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP------------DQEPLSWNTRMKI 150
++ L+G CT ++ EY G+L ++L P +E LS +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
A ARG+EYL K I+RDL + N+L+ D K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDXXK 207
Query: 211 MGTYG-----YCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
T G + APE T +SD++SFGV+L E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 136/303 (44%), Gaps = 34/303 (11%)
Query: 46 NFREANLIGEGGFGKVYKGRLE----SGQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHH 100
N ++G G FG+V GRL+ VAIK L + + +F+ E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
N++ L G T ++V EYM GSL+ L + + ++ G A G++Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 162
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYC 217
L ++ ++RDL + NIL++++ K+SDFGLA++ + D+ + G +
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLARV--LEDDPEAAYTTRGGKIPIRWT 217
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFV 276
+PE K T SD++S+G+VL E+ +S G+ RP+ + + +
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEV--------MSYGE---------RPYWEMSNQDVI 260
Query: 277 HLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHPVSRNA 336
VD P C + C ++ N RP IV LD L+ S + +A
Sbjct: 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320
Query: 337 GAR 339
AR
Sbjct: 321 AAR 323
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 111/210 (52%), Gaps = 22/210 (10%)
Query: 46 NFREANLIGEGGFGKVYKGRLESGQLVAIKQL----NHEGLQGHQEFIVEVLMLSLLHHD 101
+++ +GEG +G VYK + G++VA+K++ EG+ I E+ +L LHH
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKELHHP 79
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV-GAARGLEY 160
N+V+LI S LV+E+M E L + + + ++++KI + RG+ +
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG--PVGDNTHVSTRVMGTYGYCA 218
H +++RDLK N+L+++D KL+DFGLA+ PV TH T Y A
Sbjct: 135 CHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRA 187
Query: 219 PEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
P+ M S K + DI+S G + E+ITG+
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 16/220 (7%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVE 91
E +A + +G+G FG VY+G + E VAIK +N ++ EF+ E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 92 VLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQ------EPLSWN 145
++ + ++V L+G + G L++ E M G L+ +L L P P S +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 138
Query: 146 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH 205
+++A A G+ YL+ ++RDL + N ++ DF K+ DFG+ + D
Sbjct: 139 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 195
Query: 206 VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ + + +PE G T SD++SFGVVL E+ T
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 111/210 (52%), Gaps = 22/210 (10%)
Query: 46 NFREANLIGEGGFGKVYKGRLESGQLVAIKQL----NHEGLQGHQEFIVEVLMLSLLHHD 101
+++ +GEG +G VYK + G++VA+K++ EG+ I E+ +L LHH
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKELHHP 79
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV-GAARGLEY 160
N+V+LI S LV+E+M E L + + + ++++KI + RG+ +
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG--PVGDNTHVSTRVMGTYGYCA 218
H +++RDLK N+L+++D KL+DFGLA+ PV TH T Y A
Sbjct: 135 CHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRA 187
Query: 219 PEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
P+ M S K + DI+S G + E+ITG+
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
IG G FG V+ G + VAIK + EG ++FI E ++ L H LV L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
LV+E+M G L D+ L + + T + + + G+ YL VI+R
Sbjct: 74 QAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHR 127
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSD 232
DL + N L+ + K+SDFG+ + + D ST + +PE + + KSD
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 233 IYSFGVVLLELITGRK 248
++SFGV++ E+ + K
Sbjct: 187 VWSFGVLMWEVFSEGK 202
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 16/220 (7%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVE 91
E +A + +G+G FG VY+G + E VAIK +N ++ EF+ E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 92 VLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQ------EPLSWN 145
++ + ++V L+G + G L++ E M G L+ +L L P P S +
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 128
Query: 146 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH 205
+++A A G+ YL+ ++RDL + N ++ DF K+ DFG+ + D
Sbjct: 129 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 185
Query: 206 VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ + + +PE G T SD++SFGVVL E+ T
Sbjct: 186 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + VA+K L + + + I E+ M+ ++ H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHL---------YDLEPDQEP---LSWNTRMKI 150
++ L+G CT ++ EY G+L ++L Y P P LS +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
A ARG+EYL K I+RDL + N+L+ D K++DFGLA+ D H+
Sbjct: 145 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 196
Query: 211 MGTYG-----YCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
T G + APE T +SD++SFGV+L E+ T
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + VA+K L + + + I E+ M+ ++ H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHL---------YDLEPDQEP---LSWNTRMKI 150
++ L+G CT ++ EY G+L ++L Y P P LS +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
A ARG+EYL K I+RDL + N+L+ D K++DFGLA+ D H+
Sbjct: 148 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 199
Query: 211 MGTYG-----YCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
T G + APE T +SD++SFGV+L E+ T
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + VA+K L + + + I E+ M+ ++ H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHL---------YDLEPDQEP---LSWNTRMKI 150
++ L+G CT ++ EY G+L ++L Y P P LS +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
A ARG+EYL K I+RDL + N+L+ D K++DFGLA+ D H+
Sbjct: 149 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 200
Query: 211 MGTYG-----YCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
T G + APE T +SD++SFGV+L E+ T
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 27/230 (11%)
Query: 41 AIATRNFREANLI-----GEGGFGKVYK-GRLESGQLVAIKQLNHEGLQGHQEFIVEVLM 94
++ R FR ++LI G+G FG+ K E+G+++ +K+L + + F+ EV +
Sbjct: 1 SMPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKV 60
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGA 154
+ L H N++ IG + + EY+ G+L + ++ Q P W+ R+ A
Sbjct: 61 MRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMD-SQYP--WSQRVSFAKDI 117
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL------GPVG------- 201
A G+ YLH +I+RDL S N L+ + N ++DFGLA+L P G
Sbjct: 118 ASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKP 174
Query: 202 DNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMD 251
D T V+G + APE K D++SFG+VL E+I GR D
Sbjct: 175 DRKKRYT-VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + VA+K L + + + I E+ M+ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHL---------YDLEPDQEP---LSWNTRMKI 150
++ L+G CT ++ EY G+L ++L Y P P LS +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
A ARG+EYL K I+RDL + N+L+ D K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 211 MGTYG-----YCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
T G + APE T +SD++SFGV+L E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
IG G FG V+ G + VAIK + EG ++FI E ++ L H LV L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
LV+E+M G L D+ L + + T + + + G+ YL VI+R
Sbjct: 74 QAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHR 127
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSD 232
DL + N L+ + K+SDFG+ + + D ST + +PE + + KSD
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 233 IYSFGVVLLELITGRK 248
++SFGV++ E+ + K
Sbjct: 187 VWSFGVLMWEVFSEGK 202
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
IG G FG V+ G + VAIK + EG ++FI E ++ L H LV L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
LV+E+M G L D+ L + + T + + + G+ YL VI+R
Sbjct: 77 QAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHR 130
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSD 232
DL + N L+ + K+SDFG+ + + D ST + +PE + + KSD
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 233 IYSFGVVLLELITGRK 248
++SFGV++ E+ + K
Sbjct: 190 VWSFGVLMWEVFSEGK 205
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 111/220 (50%), Gaps = 24/220 (10%)
Query: 40 LAIATRNFREANL-----IGEGGFGKVYKGRL----ESGQL-VAIKQL-NHEGLQGHQEF 88
+ + R F+E L +G G FG V+KG ES ++ V IK + + G Q Q
Sbjct: 3 MKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAV 62
Query: 89 IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEP---LSWN 145
+L + L H ++V L+G C G LV +Y+P+GSL DH+ P L+W
Sbjct: 63 TDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG 121
Query: 146 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH 205
++ A+G+ YL +++R+L + N+LL + +++DFG+A L P D
Sbjct: 122 VQI------AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 172
Query: 206 VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ + + A E GK T +SD++S+GV + EL+T
Sbjct: 173 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
IG G FG V+ G + VAIK + EG ++FI E ++ L H LV L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
LV+E+M G L D+ L + + T + + + G+ YL VI+R
Sbjct: 72 QAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHR 125
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSD 232
DL + N L+ + K+SDFG+ + + D ST + +PE + + KSD
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 233 IYSFGVVLLELITGRK 248
++SFGV++ E+ + K
Sbjct: 185 VWSFGVLMWEVFSEGK 200
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + VA+K L + + + I E+ M+ ++ H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHL---------YDLEPDQEP---LSWNTRMKI 150
++ L+G CT ++ EY G+L ++L Y P P LS +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
A ARG+EYL K I+RDL + N+L+ D K++DFGLA+ D H+
Sbjct: 197 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 248
Query: 211 MGTYG-----YCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
T G + APE T +SD++SFGV+L E+ T
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 34/303 (11%)
Query: 46 NFREANLIGEGGFGKVYKGRLE----SGQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHH 100
N ++G G FG+V GRL+ VAIK L + + +F+ E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
N++ L G T ++V EYM GSL+ L + + ++ G A G++Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 162
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYC 217
L ++ ++RDL + NIL++++ K+SDFGL+++ + D+ + G +
Sbjct: 163 L---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWT 217
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFV 276
+PE K T SD++S+G+VL E+ +S G+ RP+ + + +
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEV--------MSYGE---------RPYWEMSNQDVI 260
Query: 277 HLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHPVSRNA 336
VD P C + C ++ N RP IV LD L+ S + +A
Sbjct: 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320
Query: 337 GAR 339
AR
Sbjct: 321 AAR 323
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 34/303 (11%)
Query: 46 NFREANLIGEGGFGKVYKGRLE----SGQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHH 100
N ++G G FG+V GRL+ VAIK L + + +F+ E ++ H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
N++ L G T ++V EYM GSL+ L + + ++ G A G++Y
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 133
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYC 217
L ++ ++RDL + NIL++++ K+SDFGL+++ + D+ + G +
Sbjct: 134 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWT 188
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFV 276
+PE K T SD++S+G+VL E+ +S G+ RP+ + + +
Sbjct: 189 SPEAIAYRKFTSASDVWSYGIVLWEV--------MSYGE---------RPYWEMSNQDVI 231
Query: 277 HLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHPVSRNA 336
VD P C + C ++ N RP IV LD L+ S + +A
Sbjct: 232 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 291
Query: 337 GAR 339
AR
Sbjct: 292 AAR 294
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 111/209 (53%), Gaps = 17/209 (8%)
Query: 47 FREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQ---GHQEFIVEVLMLSLLHHDN 102
F + ++G GGFG+V+ +++ +G+L A K+LN + L+ G+Q +VE +L+ +H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD----QEPLSWNTRMKIAVGAARGL 158
+V+L + LV M G + H+Y+++ D QEP + +I GL
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGL 302
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
E+LH + +IYRDLK N+LLD+D N ++SD GLA G + GT G+ A
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMA 357
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITGR 247
PE + + D ++ GV L E+I R
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 34/303 (11%)
Query: 46 NFREANLIGEGGFGKVYKGRLE----SGQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHH 100
N ++G G FG+V GRL+ VAIK L + + +F+ E ++ H
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
N++ L G T ++V EYM GSL+ L + + ++ G A G++Y
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 150
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYC 217
L ++ ++RDL + NIL++++ K+SDFGL+++ + D+ + G +
Sbjct: 151 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWT 205
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFV 276
+PE K T SD++S+G+VL E+ +S G+ RP+ + + +
Sbjct: 206 SPEAIAYRKFTSASDVWSYGIVLWEV--------MSYGE---------RPYWEMSNQDVI 248
Query: 277 HLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHPVSRNA 336
VD P C + C ++ N RP IV LD L+ S + +A
Sbjct: 249 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 308
Query: 337 GAR 339
AR
Sbjct: 309 AAR 311
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 111/209 (53%), Gaps = 17/209 (8%)
Query: 47 FREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQ---GHQEFIVEVLMLSLLHHDN 102
F + ++G GGFG+V+ +++ +G+L A K+LN + L+ G+Q +VE +L+ +H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD----QEPLSWNTRMKIAVGAARGL 158
+V+L + LV M G + H+Y+++ D QEP + +I GL
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGL 302
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
E+LH + +IYRDLK N+LLD+D N ++SD GLA G + GT G+ A
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMA 357
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITGR 247
PE + + D ++ GV L E+I R
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 111/209 (53%), Gaps = 17/209 (8%)
Query: 47 FREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQ---GHQEFIVEVLMLSLLHHDN 102
F + ++G GGFG+V+ +++ +G+L A K+LN + L+ G+Q +VE +L+ +H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD----QEPLSWNTRMKIAVGAARGL 158
+V+L + LV M G + H+Y+++ D QEP + +I GL
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGL 302
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
E+LH + +IYRDLK N+LLD+D N ++SD GLA G + GT G+ A
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMA 357
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITGR 247
PE + + D ++ GV L E+I R
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + VA+K L + + + I E+ M+ ++ H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP------------DQEPLSWNTRMKI 150
++ L+G CT ++ EY G+L ++L P +E LS +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
A ARG+EYL K I+RDL + N+L+ D K++DFGLA+ D H+
Sbjct: 141 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 192
Query: 211 MGTYG-----YCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
T G + APE T +SD++SFGV+L E+ T
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 111/209 (53%), Gaps = 17/209 (8%)
Query: 47 FREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQ---GHQEFIVEVLMLSLLHHDN 102
F + ++G GGFG+V+ +++ +G+L A K+LN + L+ G+Q +VE +L+ +H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD----QEPLSWNTRMKIAVGAARGL 158
+V+L + LV M G + H+Y+++ D QEP + +I GL
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGL 302
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
E+LH + +IYRDLK N+LLD+D N ++SD GLA G + GT G+ A
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMA 357
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITGR 247
PE + + D ++ GV L E+I R
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 46 NFREANLIGEGGFGKVYKGRL----ESGQL-VAIKQL-NHEGLQGHQEFIVEVLMLSLLH 99
R+ ++G G FG V+KG ES ++ V IK + + G Q Q +L + L
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 91
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEP---LSWNTRMKIAVGAAR 156
H ++V L+G C G LV +Y+P+GSL DH+ P L+W ++ A+
Sbjct: 92 HAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AK 144
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL +++R+L + N+LL + +++DFG+A L P D + + +
Sbjct: 145 GMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 201
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
A E GK T +SD++S+GV + EL+T
Sbjct: 202 MALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 34/303 (11%)
Query: 46 NFREANLIGEGGFGKVYKGRLE----SGQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHH 100
N ++G G FG+V GRL+ VAIK L + + +F+ E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
N++ L G T ++V EYM GSL+ L + + ++ G A G++Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 162
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYC 217
L ++ ++RDL + NIL++++ K+SDFGL+++ + D+ + G +
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWT 217
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFV 276
+PE K T SD++S+G+VL E+ +S G+ RP+ + + +
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEV--------MSYGE---------RPYWEMSNQDVI 260
Query: 277 HLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHPVSRNA 336
VD P C + C ++ N RP IV LD L+ S + +A
Sbjct: 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320
Query: 337 GAR 339
AR
Sbjct: 321 AAR 323
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 44/289 (15%)
Query: 52 LIGEGGFGKVYKGRL--ESGQLV--AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+IG G FG VY G L G+ + A+K LN G +F+ E +++ H N+++L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 107 IGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG----AARGLEYL 161
+G C S L+V YM G L + + + + N +K +G A+G++YL
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKGMKYL 147
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 219
A+ ++RDL + N +LD F K++DFGLA+ + H T + A
Sbjct: 148 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 204
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E + K T KSD++SFGV+L EL+T R A P D F +
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMT-RGA-----------------PPYPDVNTF-DIT 245
Query: 280 DPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
LL GR P C + V C + +A RP +++V + + S
Sbjct: 246 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 294
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 44/289 (15%)
Query: 52 LIGEGGFGKVYKGRL--ESGQLV--AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+IG G FG VY G L G+ + A+K LN G +F+ E +++ H N+++L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 107 IGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG----AARGLEYL 161
+G C S L+V YM G L + + + + N +K +G A+G++YL
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKGMKYL 168
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 219
A+ ++RDL + N +LD F K++DFGLA+ + H T + A
Sbjct: 169 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 225
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E + K T KSD++SFGV+L EL+T R A P D F +
Sbjct: 226 ESLQTQKFTTKSDVWSFGVLLWELMT-RGA-----------------PPYPDVNTF-DIT 266
Query: 280 DPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
LL GR P C + V C + +A RP +++V + + S
Sbjct: 267 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 315
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 44/289 (15%)
Query: 52 LIGEGGFGKVYKGRL--ESGQLV--AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+IG G FG VY G L G+ + A+K LN G +F+ E +++ H N+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 107 IGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG----AARGLEYL 161
+G C S L+V YM G L + + + + N +K +G A+G++YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKGMKYL 149
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 219
A+ ++RDL + N +LD F K++DFGLA+ + H T + A
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E + K T KSD++SFGV+L EL+T R A P D F +
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT-RGA-----------------PPYPDVNTF-DIT 247
Query: 280 DPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
LL GR P C + V C + +A RP +++V + + S
Sbjct: 248 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 44/289 (15%)
Query: 52 LIGEGGFGKVYKGRL--ESGQLV--AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+IG G FG VY G L G+ + A+K LN G +F+ E +++ H N+++L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 107 IGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG----AARGLEYL 161
+G C S L+V YM G L + + + + N +K +G A+G++YL
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKGMKYL 167
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 219
A+ ++RDL + N +LD F K++DFGLA+ + H T + A
Sbjct: 168 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 224
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E + K T KSD++SFGV+L EL+T R A P D F +
Sbjct: 225 ESLQTQKFTTKSDVWSFGVLLWELMT-RGA-----------------PPYPDVNTF-DIT 265
Query: 280 DPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
LL GR P C + V C + +A RP +++V + + S
Sbjct: 266 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 314
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 44/289 (15%)
Query: 52 LIGEGGFGKVYKGRL--ESGQLV--AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+IG G FG VY G L G+ + A+K LN G +F+ E +++ H N+++L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 107 IGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG----AARGLEYL 161
+G C S L+V YM G L + + + + N +K +G A+G++YL
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKGMKYL 144
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 219
A+ ++RDL + N +LD F K++DFGLA+ + H T + A
Sbjct: 145 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 201
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E + K T KSD++SFGV+L EL+T R A P D F +
Sbjct: 202 ESLQTQKFTTKSDVWSFGVLLWELMT-RGA-----------------PPYPDVNTF-DIT 242
Query: 280 DPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
LL GR P C + V C + +A RP +++V + + S
Sbjct: 243 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 34/303 (11%)
Query: 46 NFREANLIGEGGFGKVYKGRLE----SGQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHH 100
N ++G G FG+V GRL+ VAIK L + + +F+ E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
N++ L G T ++V EYM GSL+ L + + ++ G A G++Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 162
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYC 217
L ++ ++RDL + NIL++++ K+SDFGL+++ + D+ + G +
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWT 217
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFV 276
+PE K T SD++S+G+VL E+ +S G+ RP+ + + +
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEV--------MSYGE---------RPYWEMSNQDVI 260
Query: 277 HLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHPVSRNA 336
VD P C + C ++ N RP IV LD L+ S + +A
Sbjct: 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320
Query: 337 GAR 339
AR
Sbjct: 321 AAR 323
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 34/303 (11%)
Query: 46 NFREANLIGEGGFGKVYKGRLE----SGQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHH 100
N ++G G FG+V GRL+ VAIK L + + +F+ E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
N++ L G T ++V EYM GSL+ L + + ++ G A G++Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 162
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYC 217
L ++ ++RDL + NIL++++ K+SDFGL+++ + D+ + G +
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWT 217
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFV 276
+PE K T SD++S+G+VL E+ +S G+ RP+ + + +
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEV--------MSYGE---------RPYWEMSNQDVI 260
Query: 277 HLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHPVSRNA 336
VD P C + C ++ N RP IV LD L+ S + +A
Sbjct: 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320
Query: 337 GAR 339
AR
Sbjct: 321 AAR 323
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 34/303 (11%)
Query: 46 NFREANLIGEGGFGKVYKGRLE----SGQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHH 100
N ++G G FG+V GRL+ VAIK L + + +F+ E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
N++ L G T ++V EYM GSL+ L + + ++ G A G++Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 162
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYC 217
L ++ ++RDL + NIL++++ K+SDFGL+++ + D+ + G +
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWT 217
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFV 276
+PE K T SD++S+G+VL E+ +S G+ RP+ + + +
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEV--------MSYGE---------RPYWEMSNQDVI 260
Query: 277 HLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHPVSRNA 336
VD P C + C ++ N RP IV LD L+ S + +A
Sbjct: 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320
Query: 337 GAR 339
AR
Sbjct: 321 AAR 323
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 34/303 (11%)
Query: 46 NFREANLIGEGGFGKVYKGRLE----SGQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHH 100
N ++G G FG+V GRL+ VAIK L + + +F+ E ++ H
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
N++ L G T ++V EYM GSL+ L + + ++ G A G++Y
Sbjct: 104 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 160
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYC 217
L ++ ++RDL + NIL++++ K+SDFGL+++ + D+ + G +
Sbjct: 161 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWT 215
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFV 276
+PE K T SD++S+G+VL E+ +S G+ RP+ + + +
Sbjct: 216 SPEAIAYRKFTSASDVWSYGIVLWEV--------MSYGE---------RPYWEMSNQDVI 258
Query: 277 HLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHPVSRNA 336
VD P C + C ++ N RP IV LD L+ S + +A
Sbjct: 259 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 318
Query: 337 GAR 339
AR
Sbjct: 319 AAR 321
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 44/289 (15%)
Query: 52 LIGEGGFGKVYKGRL--ESGQLV--AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+IG G FG VY G L G+ + A+K LN G +F+ E +++ H N+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 107 IGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG----AARGLEYL 161
+G C S L+V YM G L + + + + N +K +G A+G++YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKGMKYL 149
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 219
A+ ++RDL + N +LD F K++DFGLA+ + H T + A
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E + K T KSD++SFGV+L EL+T R A P D F +
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT-RGA-----------------PPYPDVNTF-DIT 247
Query: 280 DPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
LL GR P C + V C + +A RP +++V + + S
Sbjct: 248 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 44/289 (15%)
Query: 52 LIGEGGFGKVYKGRL--ESGQLV--AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+IG G FG VY G L G+ + A+K LN G +F+ E +++ H N+++L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 107 IGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG----AARGLEYL 161
+G C S L+V YM G L + + + + N +K +G A+G++YL
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKGMKYL 141
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 219
A+ ++RDL + N +LD F K++DFGLA+ + H T + A
Sbjct: 142 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 198
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E + K T KSD++SFGV+L EL+T R A P D F +
Sbjct: 199 ESLQTQKFTTKSDVWSFGVLLWELMT-RGA-----------------PPYPDVNTF-DIT 239
Query: 280 DPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
LL GR P C + V C + +A RP +++V + + S
Sbjct: 240 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 288
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 44/289 (15%)
Query: 52 LIGEGGFGKVYKGRL--ESGQLV--AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+IG G FG VY G L G+ + A+K LN G +F+ E +++ H N+++L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 107 IGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG----AARGLEYL 161
+G C S L+V YM G L + + + + N +K +G A+G++YL
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKGMKYL 146
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 219
A+ ++RDL + N +LD F K++DFGLA+ + H T + A
Sbjct: 147 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 203
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E + K T KSD++SFGV+L EL+T R A P D F +
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMT-RGA-----------------PPYPDVNTF-DIT 244
Query: 280 DPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
LL GR P C + V C + +A RP +++V + + S
Sbjct: 245 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 293
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G G FG V G+ VAIK + EG EFI E ++ L H+ LV L G CT
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
++ EYM G L ++L ++ + +++ +EYL K ++R
Sbjct: 75 QRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHR 128
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAMSGKLTL 229
DL + N L+++ K+SDFGL++ V D+ + S+ +G+ + PE M K +
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSS 184
Query: 230 KSDIYSFGVVLLELIT 245
KSDI++FGV++ E+ +
Sbjct: 185 KSDIWAFGVLMWEIYS 200
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G G FG V G+ VAIK + EG EFI E ++ L H+ LV L G CT
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
++ EYM G L ++L ++ + +++ +EYL K ++R
Sbjct: 71 QRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHR 124
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAMSGKLTL 229
DL + N L+++ K+SDFGL++ V D+ + S+ +G+ + PE M K +
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSS 180
Query: 230 KSDIYSFGVVLLELIT 245
KSDI++FGV++ E+ +
Sbjct: 181 KSDIWAFGVLMWEIYS 196
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 44/289 (15%)
Query: 52 LIGEGGFGKVYKGRL--ESGQLV--AIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTL 106
+IG G FG VY G L G+ + A+K LN G +F+ E +++ H N+++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 107 IGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG----AARGLEYL 161
+G C S L+V YM G L + + + + N +K +G A+G++YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKGMKYL 148
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 219
A+ ++RDL + N +LD F K++DFGLA+ + H T + A
Sbjct: 149 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 205
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV 279
E + K T KSD++SFGV+L EL+T R A P D F +
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMT-RGA-----------------PPYPDVNTF-DIT 246
Query: 280 DPLLHGR---YPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
LL GR P C + V C + +A RP +++V + + S
Sbjct: 247 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 295
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 116/216 (53%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNHE-GLQGHQEFIVEVLMLSLLH 99
+ ++G G FG VYKG + G+ V AIK LN G + + EF+ E L+++ +
Sbjct: 16 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
H +LV L+G C S +L V + MP G L +++++ + + Q L+W V A+
Sbjct: 76 HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAK 128
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + + K++DFGLA+L + + + +
Sbjct: 129 GMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 185
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E K T +SD++S+GV + EL+T G K D
Sbjct: 186 MALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 116/216 (53%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNHE-GLQGHQEFIVEVLMLSLLH 99
+ ++G G FG VYKG + G+ V AIK LN G + + EF+ E L+++ +
Sbjct: 39 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
H +LV L+G C S +L V + MP G L +++++ + + Q L+W V A+
Sbjct: 99 HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAK 151
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + + K++DFGLA+L + + + +
Sbjct: 152 GMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 208
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E K T +SD++S+GV + EL+T G K D
Sbjct: 209 MALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + VA+K L + + + I E+ M+ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP------------DQEPLSWNTRMKI 150
++ L+G CT ++ EY G+L ++L P +E LS +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
A ARG+EYL K I+RDL + N+L+ D K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 211 MGTYG-----YCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
T G + APE T +SD++SFGV+L E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 135/303 (44%), Gaps = 34/303 (11%)
Query: 46 NFREANLIGEGGFGKVYKGRLE----SGQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHH 100
N ++G G FG+V GRL+ VAIK L + + +F+ E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
N++ L G T ++V EYM GSL+ L + + ++ G A G++Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 162
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYC 217
L ++ ++RDL + NIL++++ K+SDFGL ++ + D+ + G +
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRV--LEDDPEAAYTTRGGKIPIRWT 217
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFV 276
+PE K T SD++S+G+VL E+ +S G+ RP+ + + +
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEV--------MSYGE---------RPYWEMSNQDVI 260
Query: 277 HLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHPVSRNA 336
VD P C + C ++ N RP IV LD L+ S + +A
Sbjct: 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320
Query: 337 GAR 339
AR
Sbjct: 321 AAR 323
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G G FG V G+ VAIK + EG EFI E ++ L H+ LV L G CT
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
++ EYM G L ++L ++ + +++ +EYL K ++R
Sbjct: 76 QRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHR 129
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAMSGKLTL 229
DL + N L+++ K+SDFGL++ V D+ + S+ +G+ + PE M K +
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSS 185
Query: 230 KSDIYSFGVVLLELIT 245
KSDI++FGV++ E+ +
Sbjct: 186 KSDIWAFGVLMWEIYS 201
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G G FG V G+ VAIK + EG EFI E ++ L H+ LV L G CT
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
++ EYM G L ++L ++ + +++ +EYL K ++R
Sbjct: 91 QRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHR 144
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAMSGKLTL 229
DL + N L+++ K+SDFGL++ V D+ + S+ +G+ + PE M K +
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSS 200
Query: 230 KSDIYSFGVVLLELIT 245
KSDI++FGV++ E+ +
Sbjct: 201 KSDIWAFGVLMWEIYS 216
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 18/208 (8%)
Query: 41 AIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHH 100
A+ + + IG+G FG V G G VA+K + ++ Q F+ E +++ L H
Sbjct: 2 ALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRH 58
Query: 101 DNLVTLIGYCTSGDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
NLV L+G L +V EYM GSL D+L + L + +K ++ +E
Sbjct: 59 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAME 116
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYC 217
YL ++RDL + N+L+ D K+SDFGL K ST+ G +
Sbjct: 117 YLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWT 166
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELIT 245
APE K + KSD++SFG++L E+ +
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G G FG V G+ VAIK + EG EFI E ++ L H+ LV L G CT
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
++ EYM G L ++L ++ + +++ +EYL K ++R
Sbjct: 82 QRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHR 135
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAMSGKLTL 229
DL + N L+++ K+SDFGL++ V D+ + S+ +G+ + PE M K +
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSS 191
Query: 230 KSDIYSFGVVLLELIT 245
KSDI++FGV++ E+ +
Sbjct: 192 KSDIWAFGVLMWEIYS 207
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 18/208 (8%)
Query: 41 AIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHH 100
A+ + + IG+G FG V G G VA+K + ++ Q F+ E +++ L H
Sbjct: 17 ALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRH 73
Query: 101 DNLVTLIGYCTSGDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
NLV L+G L +V EYM GSL D+L + L + +K ++ +E
Sbjct: 74 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAME 131
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYC 217
YL ++RDL + N+L+ D K+SDFGL K ST+ G +
Sbjct: 132 YLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWT 181
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELIT 245
APE K + KSD++SFG++L E+ +
Sbjct: 182 APEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 8/196 (4%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
IG G FG V+ G + VAIK + EG +FI E ++ L H LV L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
LV+E+M G L D+ L + + T + + + G+ YL VI+R
Sbjct: 94 QAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHR 147
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSD 232
DL + N L+ + K+SDFG+ + + D ST + +PE + + KSD
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 233 IYSFGVVLLELITGRK 248
++SFGV++ E+ + K
Sbjct: 207 VWSFGVLMWEVFSEGK 222
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 8/193 (4%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G G FG V G+ VAIK + EG EFI E ++ L H+ LV L G CT
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
++ EYM G L ++L ++ + +++ +EYL K ++R
Sbjct: 91 QRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHR 144
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSD 232
DL + N L+++ K+SDFGL++ + D S + PE M K + KSD
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRY-VLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 233 IYSFGVVLLELIT 245
I++FGV++ E+ +
Sbjct: 204 IWAFGVLMWEIYS 216
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 43 ATRNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHE---GLQGHQEFIVEVLMLSLL 98
+ ++F+ +G G FG+V+ R +G+ A+K L E L+ + E LMLS++
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H ++ + G Q ++ +Y+ G L L + P++ A L
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVA----KFYAAEVCLAL 119
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
EYLH K +IYRDLK NILLD + + K++DFG AK P V+ + GT Y A
Sbjct: 120 EYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVP-----DVTYXLCGTPDYIA 171
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE + D +SFG+++ E++ G
Sbjct: 172 PEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 18/208 (8%)
Query: 41 AIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHH 100
A+ + + IG+G FG V G G VA+K + ++ Q F+ E +++ L H
Sbjct: 189 ALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRH 245
Query: 101 DNLVTLIGYCTSGDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
NLV L+G L +V EYM GSL D+L + L + +K ++ +E
Sbjct: 246 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAME 303
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYC 217
YL ++RDL + N+L+ D K+SDFGL K ST+ G +
Sbjct: 304 YLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWT 353
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELIT 245
APE K + KSD++SFG++L E+ +
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE--SGQLV--AIKQLNHEGL---QGHQEFIVEVLM 94
I ++ R +G+G FG V +G + SG+ V A+K L + L + +FI EV
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGA 154
+ L H NL+ L G + ++ V E P+GSL D L Q T + AV
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQV 124
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT- 213
A G+ YL K I+RDL + N+LL K+ DFGL + P D+ +V
Sbjct: 125 AEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 181
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ +CAPE + + SD + FGV L E+ T
Sbjct: 182 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE--SGQLV--AIKQLNHEGL---QGHQEFIVEVLM 94
I ++ R +G+G FG V +G + SG+ V A+K L + L + +FI EV
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGA 154
+ L H NL+ L G + ++ V E P+GSL D L Q T + AV
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQV 120
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT- 213
A G+ YL K I+RDL + N+LL K+ DFGL + P D+ +V
Sbjct: 121 AEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 177
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ +CAPE + + SD + FGV L E+ T
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE--SGQLV--AIKQLNHEGL---QGHQEFIVEVLM 94
I ++ R +G+G FG V +G + SG+ V A+K L + L + +FI EV
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGA 154
+ L H NL+ L G + ++ V E P+GSL D L Q T + AV
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQV 120
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT- 213
A G+ YL K I+RDL + N+LL K+ DFGL + P D+ +V
Sbjct: 121 AEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 177
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ +CAPE + + SD + FGV L E+ T
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 8/196 (4%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
IG G FG V+ G + VAIK + EG ++FI E ++ L H LV L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 113 GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYR 172
LV E+M G L D+ L + + T + + + G+ YL VI+R
Sbjct: 75 QAPICLVTEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHR 128
Query: 173 DLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSD 232
DL + N L+ + K+SDFG+ + + D ST + +PE + + KSD
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 233 IYSFGVVLLELITGRK 248
++SFGV++ E+ + K
Sbjct: 188 VWSFGVLMWEVFSEGK 203
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE--SGQLV--AIKQLNHEGL---QGHQEFIVEVLM 94
I ++ R +G+G FG V +G + SG+ V A+K L + L + +FI EV
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGA 154
+ L H NL+ L G + ++ V E P+GSL D L Q T + AV
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQV 124
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT- 213
A G+ YL K I+RDL + N+LL K+ DFGL + P D+ +V
Sbjct: 125 AEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 181
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ +CAPE + + SD + FGV L E+ T
Sbjct: 182 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE--SGQLV--AIKQLNHEGL---QGHQEFIVEVLM 94
I ++ R +G+G FG V +G + SG+ V A+K L + L + +FI EV
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGA 154
+ L H NL+ L G + ++ V E P+GSL D L Q T + AV
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQV 130
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT- 213
A G+ YL K I+RDL + N+LL K+ DFGL + P D+ +V
Sbjct: 131 AEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 187
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ +CAPE + + SD + FGV L E+ T
Sbjct: 188 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 45/315 (14%)
Query: 35 FTFRELAIATRNFREA---------NLIGEGGFGKVYKGRLE-SGQ---LVAIKQLNHEG 81
FTF + A R F + +IG G FG+V G L+ G+ VAIK L
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 82 LQGHQ-EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE 140
+ + +F+ E ++ H N++ L G T +++ E+M GSL+ L +
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF---LRQNDG 130
Query: 141 PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPV 200
+ + + G A G++YL A+ ++RDL + NIL++++ K+SDFGL++ +
Sbjct: 131 QFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRF--L 185
Query: 201 GDNTHVSTRVMGTYG-----YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKG 255
D+T T G + APE K T SD++S+G+V+ E+ +S G
Sbjct: 186 EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEV--------MSYG 237
Query: 256 QGEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLIN 314
+ RP+ + ++ ++ P C + + C ++ N RP
Sbjct: 238 E---------RPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFG 288
Query: 315 DIVVALDYLVSQRDS 329
IV LD ++ +S
Sbjct: 289 QIVNTLDKMIRNPNS 303
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 17/214 (7%)
Query: 46 NFREANLIGEGGFGKVYK------GRLESGQLVAIKQLNHEGLQGHQEFIVEVL--MLSL 97
N + +G G FGKV + G+ ++ VA+K L +E ++ L M L
Sbjct: 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 98
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHL-----YDLEP-DQEPLSWNTRMKIA 151
H+N+V L+G CT G L++ EY G L + L DL+ D PL + +
Sbjct: 99 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 158
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM 211
A+G+ +L A+ I+RD+ + N+LL N K+ DFGLA+ N V
Sbjct: 159 SQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 215
Query: 212 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T++SD++S+G++L E+ +
Sbjct: 216 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 17/214 (7%)
Query: 46 NFREANLIGEGGFGKVYK------GRLESGQLVAIKQLNHEGLQGHQEFIVEVL--MLSL 97
N + +G G FGKV + G+ ++ VA+K L +E ++ L M L
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHL-----YDLEP-DQEPLSWNTRMKIA 151
H+N+V L+G CT G L++ EY G L + L DL+ D PL + +
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 166
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM 211
A+G+ +L A+ I+RD+ + N+LL N K+ DFGLA+ N V
Sbjct: 167 SQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 223
Query: 212 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T++SD++S+G++L E+ +
Sbjct: 224 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 53 IGEGGFGKVYKGRLES-GQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGY 109
IG G FG+V+ GRL + LVA+K E L +F+ E +L H N+V LIG
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 110 CTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 169
CT Q+ +Y M + D L L + L T +++ AA G+EYL K
Sbjct: 181 CT---QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 170 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL 229
I+RDL + N L+ K+SDFG+++ G + APE G+ +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 230 KSDIYSFGVVLLELIT 245
+SD++SFG++L E +
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE--SGQLV--AIKQLNHEGL---QGHQEFIVEVLM 94
I ++ R +G+G FG V +G + SG+ V A+K L + L + +FI EV
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGA 154
+ L H NL+ L G + ++ V E P+GSL D L Q T + AV
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQV 120
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT- 213
A G+ YL K I+RDL + N+LL K+ DFGL + P D+ V
Sbjct: 121 AEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP 177
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ +CAPE + + SD + FGV L E+ T
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 135/303 (44%), Gaps = 34/303 (11%)
Query: 46 NFREANLIGEGGFGKVYKGRLE----SGQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHH 100
N ++G G FG+V GRL+ VAIK L + + +F+ E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
N++ L G T ++V E M GSL+ L + + ++ G A G++Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 162
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYC 217
L ++ ++RDL + NIL++++ K+SDFGL+++ + D+ + G +
Sbjct: 163 L---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWT 217
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFV 276
+PE K T SD++S+G+VL E+ +S G+ RP+ + + +
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEV--------MSYGE---------RPYWEMSNQDVI 260
Query: 277 HLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHPVSRNA 336
VD P C + C ++ N RP IV LD L+ S + +A
Sbjct: 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320
Query: 337 GAR 339
AR
Sbjct: 321 AAR 323
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 20/204 (9%)
Query: 47 FREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGH---QEFIVEVLMLSLLHHDN 102
F + IG G FG VY R + + ++VAIK++++ G Q + Q+ I EV L L H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLH 162
+ G LV EY +GS D L E ++PL + GA +GL YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC-LGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 163 CKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA 222
+I+RD+K+ NILL KL DFG A + + +GT + APE
Sbjct: 172 SHN---MIHRDVKAGNILLSEPGLVKLGDFGSASI------MAPANXFVGTPYWMAPEVI 222
Query: 223 MS---GKLTLKSDIYSFGVVLLEL 243
++ G+ K D++S G+ +EL
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 101/205 (49%), Gaps = 22/205 (10%)
Query: 47 FREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGH---QEFIVEVLMLSLLHHDN 102
F + IG G FG VY R + + ++VAIK++++ G Q + Q+ I EV L L H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLH 162
+ G LV EY +GS D L E ++PL + GA +GL YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC-LGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 163 CKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEY 221
+I+RD+K+ NILL KL DFG A + P + +GT + APE
Sbjct: 133 SHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVGTPYWMAPEV 182
Query: 222 AMS---GKLTLKSDIYSFGVVLLEL 243
++ G+ K D++S G+ +EL
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 18/208 (8%)
Query: 41 AIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHH 100
A+ + + IG+G FG V G G VA+K + ++ Q F+ E +++ L H
Sbjct: 8 ALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRH 64
Query: 101 DNLVTLIGYCTSGDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
NLV L+G L +V EYM GSL D+L + L + +K ++ +E
Sbjct: 65 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAME 122
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYC 217
YL ++RDL + N+L+ D K+SDFGL K ST+ G +
Sbjct: 123 YLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWT 172
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELIT 245
APE + KSD++SFG++L E+ +
Sbjct: 173 APEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE--SGQLV--AIKQLNHEGL---QGHQEFIVEVLM 94
I ++ R +G+G FG V +G + SG+ V A+K L + L + +FI EV
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGA 154
+ L H NL+ L G + ++ V E P+GSL D L Q T + AV
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQV 130
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT- 213
A G+ YL K I+RDL + N+LL K+ DFGL + P D+ V
Sbjct: 131 AEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP 187
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ +CAPE + + SD + FGV L E+ T
Sbjct: 188 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 53 IGEGGFGKVYKGRLES-GQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IGEG G V + S G+LVA+K+++ Q + EV+++ H+N+V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
GD+ +V E++ G+L D + ++E ++ + + + L LH + VI+
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIH 148
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RD+KS +ILL +D KLSDFG V ++GT + APE +
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 232 DIYSFGVVLLELITG 246
DI+S G++++E++ G
Sbjct: 207 DIWSLGIMVIEMVDG 221
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 53 IGEGGFGKVYKGRLES-GQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGY 109
IG G FG+V+ GRL + LVA+K E L +F+ E +L H N+V LIG
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 110 CTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 169
CT Q+ +Y M + D L L + L T +++ AA G+EYL K
Sbjct: 181 CT---QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 170 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL 229
I+RDL + N L+ K+SDFG+++ G + APE G+ +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 230 KSDIYSFGVVLLELIT 245
+SD++SFG++L E +
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 53 IGEGGFGKVYKGRLES-GQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IGEG G V + S G+LVA+K+++ Q + EV+++ H+N+V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
GD+ +V E++ G+L D + ++E ++ + + + L LH + VI+
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIH 139
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RD+KS +ILL +D KLSDFG V ++GT + APE +
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 232 DIYSFGVVLLELITG 246
DI+S G++++E++ G
Sbjct: 198 DIWSLGIMVIEMVDG 212
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 135/303 (44%), Gaps = 34/303 (11%)
Query: 46 NFREANLIGEGGFGKVYKGRLE----SGQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHH 100
N ++G G FG+V GRL+ VAIK L + + +F+ E ++ H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
N++ L G T ++V E M GSL+ L + + ++ G A G++Y
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 133
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYC 217
L ++ ++RDL + NIL++++ K+SDFGL+++ + D+ + G +
Sbjct: 134 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWT 188
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFV 276
+PE K T SD++S+G+VL E+ +S G+ RP+ + + +
Sbjct: 189 SPEAIAYRKFTSASDVWSYGIVLWEV--------MSYGE---------RPYWEMSNQDVI 231
Query: 277 HLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHPVSRNA 336
VD P C + C ++ N RP IV LD L+ S + +A
Sbjct: 232 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 291
Query: 337 GAR 339
AR
Sbjct: 292 AAR 294
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 53 IGEGGFGKVYKGRLES-GQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IGEG G V + S G+LVA+K+++ Q + EV+++ H+N+V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
GD+ +V E++ G+L D + ++E ++ + + + L LH + VI+
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIH 150
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RD+KS +ILL +D KLSDFG V ++GT + APE +
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 232 DIYSFGVVLLELITG 246
DI+S G++++E++ G
Sbjct: 209 DIWSLGIMVIEMVDG 223
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 134/282 (47%), Gaps = 34/282 (12%)
Query: 52 LIGEGGFGKVYKGRLE-SGQL---VAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTL 106
+IG G FG+V GRL+ G+ VAIK L + + +F+ E ++ H N++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 107 IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKAN 166
G T ++V EYM GSL+ L+ + + + + G + G++YL ++
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTF---LKKNDGQFTVIQLVGMLRGISAGMKYL---SD 142
Query: 167 PPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAM 223
++RDL + NIL++++ K+SDFGL+++ + D+ + G + APE
Sbjct: 143 MGYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTAPEAIA 200
Query: 224 SGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDPL 282
K T SD++S+G+V+ E+++ GE RP+ + + + V+
Sbjct: 201 FRKFTSASDVWSYGIVMWEVVS----------YGE-------RPYWEMTNQDVIKAVEEG 243
Query: 283 LHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLV 324
P C + C +E N RP ++IV LD L+
Sbjct: 244 YRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLI 285
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 104/219 (47%), Gaps = 32/219 (14%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIK-----QLNHEGLQGHQEFIVEVLMLSLLH 99
N+R IG+G F KV R + +G+ VA+K QLN LQ + EV ++ +L+
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQ---KLFREVRIMKILN 72
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAAR--- 156
H N+V L + LV EY G + D+L + RMK A+
Sbjct: 73 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV----------AHGRMKEKEARAKFRQ 122
Query: 157 ---GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
++Y H K +++RDLK+ N+LLD D N K++DFG + VG+ G+
Sbjct: 123 IVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGS 176
Query: 214 YGYCAPEYAMSGKLT-LKSDIYSFGVVLLELITGRKAMD 251
Y APE K + D++S GV+L L++G D
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 53 IGEGGFGKVYKGRLES-GQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IGEG G V + S G+LVA+K+++ Q + EV+++ H+N+V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
GD+ +V E++ G+L D + ++E ++ + + + L LH + VI+
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIH 143
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RD+KS +ILL +D KLSDFG V ++GT + APE +
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 232 DIYSFGVVLLELITG 246
DI+S G++++E++ G
Sbjct: 202 DIWSLGIMVIEMVDG 216
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 135/303 (44%), Gaps = 34/303 (11%)
Query: 46 NFREANLIGEGGFGKVYKGRLE----SGQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHH 100
N ++G G FG+V GRL+ VAIK L + + +F+ E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
N++ L G T ++V E M GSL+ L + + ++ G A G++Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 162
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYC 217
L ++ ++RDL + NIL++++ K+SDFGL+++ + D+ + G +
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWT 217
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFV 276
+PE K T SD++S+G+VL E+ +S G+ RP+ + + +
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEV--------MSYGE---------RPYWEMSNQDVI 260
Query: 277 HLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHPVSRNA 336
VD P C + C ++ N RP IV LD L+ S + +A
Sbjct: 261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320
Query: 337 GAR 339
AR
Sbjct: 321 AAR 323
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + + VA+K L + + + + E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP------------DQEPLSWNTRMKI 150
++TL+G CT ++ EY G+L ++L P +E +++ +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
ARG+EYL A+ I+RDL + N+L+ + K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T +SD++SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 53 IGEGGFGKVYKGRLES-GQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IGEG G V + S G+LVA+K+++ Q + EV+++ H+N+V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
GD+ +V E++ G+L D + ++E ++ + + + L LH + VI+
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIH 270
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RD+KS +ILL +D KLSDFG V ++GT + APE +
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 232 DIYSFGVVLLELITG 246
DI+S G++++E++ G
Sbjct: 329 DIWSLGIMVIEMVDG 343
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHE-----GLQGHQEFIVEVLMLSLLH 99
N++ +GEG FGKV +GQ VA+K +N + +QG E E+ L LL
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 62
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H +++ L S D+ ++V EY + L+D ++ +S + +E
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQQIISAVE 117
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
Y H +++RDLK N+LLD N K++DFGL+ + G+ S G+ Y AP
Sbjct: 118 YCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAP 171
Query: 220 EYAMSGKLTL--KSDIYSFGVVLLELITGRKAMD 251
E +SGKL + D++S GV+L ++ R D
Sbjct: 172 E-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 53 IGEGGFGKVYKGRLES-GQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IGEG G V + S G+LVA+K+++ Q + EV+++ H+N+V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
GD+ +V E++ G+L D + ++E ++ + + + L LH + VI+
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIH 193
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RD+KS +ILL +D KLSDFG V ++GT + APE +
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 232 DIYSFGVVLLELITG 246
DI+S G++++E++ G
Sbjct: 252 DIWSLGIMVIEMVDG 266
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHE-----GLQGHQEFIVEVLMLSLLH 99
N++ +GEG FGKV +GQ VA+K +N + +QG E E+ L LL
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 72
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H +++ L S D+ ++V EY + L+D ++ +S + +E
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQIISAVE 127
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
Y H +++RDLK N+LLD N K++DFGL+ + G+ S G+ Y AP
Sbjct: 128 YCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAP 181
Query: 220 EYAMSGKLTL--KSDIYSFGVVLLELITGRKAMD 251
E +SGKL + D++S GV+L ++ R D
Sbjct: 182 E-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHE-----GLQGHQEFIVEVLMLSLLH 99
N++ +GEG FGKV +GQ VA+K +N + +QG E E+ L LL
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 71
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H +++ L S D+ ++V EY + L+D ++ +S + +E
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQIISAVE 126
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
Y H +++RDLK N+LLD N K++DFGL+ + G+ S G+ Y AP
Sbjct: 127 YCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAP 180
Query: 220 EYAMSGKLTL--KSDIYSFGVVLLELITGRKAMD 251
E +SGKL + D++S GV+L ++ R D
Sbjct: 181 E-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 23/220 (10%)
Query: 46 NFREANLIGEGGFGKVYK------GRLESGQLVAIKQLNHEGLQGHQEFIVEVL--MLSL 97
N + +G G FGKV + G+ ++ VA+K L +E ++ L M L
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHL---------YDLEPDQEP---LSWN 145
H+N+V L+G CT G L++ EY G L + L Y P P LS
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSR 166
Query: 146 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH 205
+ + A+G+ +L A+ I+RD+ + N+LL N K+ DFGLA+ N
Sbjct: 167 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 223
Query: 206 VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
V + APE T++SD++S+G++L E+ +
Sbjct: 224 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 134/302 (44%), Gaps = 35/302 (11%)
Query: 52 LIGEGGFGKVYKGRLES----GQLVAIKQLNHEGLQGHQ--EFIVEVLMLSLLHHDNLVT 105
+IG G FG+V +GRL++ VAIK L G Q EF+ E ++ H N++
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKG-GYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L G T+ +++ E+M G+L D L Q + + + G A G+ YL A
Sbjct: 82 LEGVVTNSMPVMILTEFMENGAL-DSFLRLNDGQ--FTVIQLVGMLRGIASGMRYL---A 135
Query: 166 NPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYA 222
++RDL + NIL++++ K+SDFGL++ + T +G + APE
Sbjct: 136 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 223 MSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDP 281
K T SD +S+G+V+ E+ +S G+ RP+ + ++ ++
Sbjct: 196 AFRKFTSASDAWSYGIVMWEV--------MSFGE---------RPYWDMSNQDVINAIEQ 238
Query: 282 LLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDS-HPVSRNAGARG 340
P C + C ++ N RP +V ALD ++ S V+R G
Sbjct: 239 DYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNPASLKIVARENGGAS 298
Query: 341 VP 342
P
Sbjct: 299 HP 300
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHE-----GLQGHQEFIVEVLMLSLLH 99
N++ +GEG FGKV +GQ VA+K +N + +QG E E+ L LL
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 66
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H +++ L S D+ ++V EY + L+D ++ +S + +E
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQQIISAVE 121
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
Y H +++RDLK N+LLD N K++DFGL+ + G+ S G+ Y AP
Sbjct: 122 YCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAP 175
Query: 220 EYAMSGKLTL--KSDIYSFGVVLLELITGRKAMD 251
E +SGKL + D++S GV+L ++ R D
Sbjct: 176 E-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + + VA+K L + + + + E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP------------DQEPLSWNTRMKI 150
++ L+G CT ++ EY G+L ++L P +E +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
ARG+EYL A+ I+RDL + N+L+ + K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T +SD++SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + + VA+K L + + + + E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP------------DQEPLSWNTRMKI 150
++ L+G CT ++ EY G+L ++L P +E +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
ARG+EYL A+ I+RDL + N+L+ + K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T +SD++SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 12/221 (5%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGH---QEFIVEVLMLSLLHHD 101
+F+ NL+G+G F VY+ + +G VAIK ++ + + Q EV + L H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
+++ L Y + LV E G + +L + +P S N G+ YL
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN---RVKPFSENEARHFMHQIITGMLYL 128
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
H +++RDL +N+LL + N K++DFGLA + H + + GT Y +PE
Sbjct: 129 HSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEI 183
Query: 222 AMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLV 262
A L+SD++S G + L+ GR D + N V
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV 224
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 56 GGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSL--LHHDNLVTLIGYCTSG 113
G FG V+K +L VA+K LQ Q + E + S + H+NL+ I G
Sbjct: 26 GRFGCVWKAQL-MNDFVAVKIFP---LQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 114 D----QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLH-----CK 164
+ L+ + GSL D+L ++WN +A +RGL YLH C+
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYLKG-----NIITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 165 A---NPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
P + +RD KS N+LL +D L+DFGLA G + +GT Y APE
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE- 195
Query: 222 AMSGKLT------LKSDIYSFGVVLLELITGRKAMD 251
+ G + L+ D+Y+ G+VL EL++ KA D
Sbjct: 196 VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 20/200 (10%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G+G FGKVYK + E+ L A K ++ + + ++++VE+ +L+ H N+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
+ ++ E+ G+++ + +LE PL+ + + L YLH + +I+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR---VMGTYGYCAPEYAMSGK-- 226
RDLK+ NIL D + KL+DFG++ NT R +GT + APE M
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVS-----AKNTRTIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 227 ---LTLKSDIYSFGVVLLEL 243
K+D++S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 142/305 (46%), Gaps = 35/305 (11%)
Query: 33 RSFTFRELAIATRNFREANLIGEGGFGKVYKGRLE-SGQL---VAIKQLNHEGLQGHQ-- 86
RSFT RE+ A+R E +IG G G+V GRL GQ VAIK L G Q
Sbjct: 40 RSFT-REIE-ASRIHIE-KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK-AGYTERQRR 95
Query: 87 EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNT 146
+F+ E ++ H N++ L G T G ++V EYM GSL+ L + Q +
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLV 154
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LGPVGDNTH 205
M VGA G+ YL ++ ++RDL + N+L+D++ K+SDFGL++ L D +
Sbjct: 155 GMLRGVGA--GMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209
Query: 206 VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWS 265
+T + APE + SD++SFGVV+ E+ L+ G+
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV--------LAYGE--------- 252
Query: 266 RPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLV 324
RP+ + + V+ P C + + C +++ RP + IV LD L+
Sbjct: 253 RPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312
Query: 325 SQRDS 329
+S
Sbjct: 313 RSPES 317
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 128/283 (45%), Gaps = 34/283 (12%)
Query: 52 LIGEGGFGKVYKGRLES----GQLVAIKQLNHEGLQGHQ--EFIVEVLMLSLLHHDNLVT 105
+IG G FG+V +GRL++ VAIK L G Q EF+ E ++ H N++
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKG-GYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L G T+ +++ E+M G+L D L Q + + + G A G+ YL A
Sbjct: 80 LEGVVTNSMPVMILTEFMENGAL-DSFLRLNDGQ--FTVIQLVGMLRGIASGMRYL---A 133
Query: 166 NPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYA 222
++RDL + NIL++++ K+SDFGL++ + T +G + APE
Sbjct: 134 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 223 MSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVDP 281
K T SD +S+G+V+ E+ +S G+ RP+ + ++ ++
Sbjct: 194 AFRKFTSASDAWSYGIVMWEV--------MSFGE---------RPYWDMSNQDVINAIEQ 236
Query: 282 LLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLV 324
P C + C ++ N RP +V ALD ++
Sbjct: 237 DYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 279
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 23/208 (11%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCTS 112
+G G FG V G+ + VA+K + EG EF E + L H LV G C+
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 113 GDQRLLVYEYMPMGSLEDHLYD----LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 168
+V EY+ G L ++L LEP Q +++ G+ +L +
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQ-------LLEMCYDVCEGMAFL---ESHQ 124
Query: 169 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAMSG 225
I+RDL + N L+D D K+SDFG+ + V D+ +VS+ +GT + APE
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRY--VLDDQYVSS--VGTKFPVKWSAPEVFHYF 180
Query: 226 KLTLKSDIYSFGVVLLELIT-GRKAMDL 252
K + KSD+++FG+++ E+ + G+ DL
Sbjct: 181 KYSSKSDVWAFGILMWEVFSLGKMPYDL 208
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 56 GGFGKVYKGRLESGQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGY---CT 111
G FG V+K +L + + VA+K + Q Q E+ EV L + H+N++ IG T
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKRGT 91
Query: 112 SGDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA----- 165
S D L L+ + GSL D L +SWN IA ARGL YLH
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 166 --NPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM 223
P + +RD+KS N+LL N+ ++DFGLA G + + +GT Y APE +
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VL 205
Query: 224 SGKLT------LKSDIYSFGVVLLELITGRKAMD 251
G + L+ D+Y+ G+VL EL + A D
Sbjct: 206 EGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 103/219 (47%), Gaps = 32/219 (14%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIK-----QLNHEGLQGHQEFIVEVLMLSLLH 99
N+R IG+G F KV R + +G+ VA+K QLN LQ + EV ++ +L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLN 71
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAAR--- 156
H N+V L + LV EY G + D+L + RMK A+
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA----------HGRMKEKEARAKFRQ 121
Query: 157 ---GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
++Y H K +++RDLK+ N+LLD D N K++DFG + G+ G+
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGS 175
Query: 214 YGYCAPEYAMSGKLT-LKSDIYSFGVVLLELITGRKAMD 251
Y APE K + D++S GV+L L++G D
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 103/219 (47%), Gaps = 32/219 (14%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIK-----QLNHEGLQGHQEFIVEVLMLSLLH 99
N+R IG+G F KV R + +G+ VA+K QLN LQ + EV ++ +L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLN 71
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAAR--- 156
H N+V L + LV EY G + D+L + RMK A+
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA----------HGRMKEKEARAKFRQ 121
Query: 157 ---GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
++Y H K +++RDLK+ N+LLD D N K++DFG + G+ G+
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGS 175
Query: 214 YGYCAPEYAMSGKLT-LKSDIYSFGVVLLELITGRKAMD 251
Y APE K + D++S GV+L L++G D
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 20/200 (10%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G+G FGKVYK + E+ L A K ++ + + ++++VE+ +L+ H N+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
+ ++ E+ G+++ + +LE PL+ + + L YLH + +I+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR---VMGTYGYCAPEYAMSGK-- 226
RDLK+ NIL D + KL+DFG++ NT R +GT + APE M
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVS-----AKNTRXIQRRDXFIGTPYWMAPEVVMCETSK 213
Query: 227 ---LTLKSDIYSFGVVLLEL 243
K+D++S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 105/213 (49%), Gaps = 20/213 (9%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIK-----QLNHEGLQGHQEFIVEVLMLSLLH 99
N+R IG+G F KV R + +G+ VAIK QLN LQ + EV ++ +L+
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKILN 69
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H N+V L + L+ EY G + D+L +E + ++ + V A ++
Sbjct: 70 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA-RSKFRQIVSA---VQ 125
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
Y H K +++RDLK+ N+LLD D N K++DFG + VG G+ Y AP
Sbjct: 126 YCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAP 179
Query: 220 EYAMSGKLT-LKSDIYSFGVVLLELITGRKAMD 251
E K + D++S GV+L L++G D
Sbjct: 180 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 20/200 (10%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G+G FGKVYK + E+ L A K ++ + + ++++VE+ +L+ H N+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
+ ++ E+ G+++ + +LE PL+ + + L YLH + +I+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR---VMGTYGYCAPEYAMSGK-- 226
RDLK+ NIL D + KL+DFG++ NT R +GT + APE M
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVS-----AKNTRXIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 227 ---LTLKSDIYSFGVVLLEL 243
K+D++S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 39/307 (12%)
Query: 33 RSFTFRELAIATRNFREANLIGEGGFGKVYKGRLE-SGQL---VAIKQLNHEGLQGHQ-- 86
RSFT RE+ A+R E +IG G G+V GRL GQ VAIK L G Q
Sbjct: 40 RSFT-REIE-ASRIHIE-KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK-AGYTERQRR 95
Query: 87 EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNT 146
+F+ E ++ H N++ L G T G ++V EYM GSL+ L + Q +
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLV 154
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
M VGA G+ YL ++ ++RDL + N+L+D++ K+SDFGL+++ + D+
Sbjct: 155 GMLRGVGA--GMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV--LEDDPDA 207
Query: 207 STRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
+ G + APE + SD++SFGVV+ E+ L+ G+
Sbjct: 208 AXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV--------LAYGE------- 252
Query: 264 WSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDY 322
RP+ + + V+ P C + + C +++ RP + IV LD
Sbjct: 253 --RPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
Query: 323 LVSQRDS 329
L+ +S
Sbjct: 311 LIRSPES 317
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 38/292 (13%)
Query: 50 ANLIGEGGFGKVYKGRLESGQLVAIK------QLNHEGLQGHQEFIVEVLMLSLLHHDNL 103
++GEG FG V +G L+ ++K +L++ + +EF+ E + H N+
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 104 VTLIGYCTSGDQR-----LLVYEYMPMGSLEDHLY--DLEPDQEPLSWNTRMKIAVGAAR 156
+ L+G C + +++ +M G L +L LE + + T +K V A
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+EYL +N ++RDL + N +L +D ++DFGL+K GD +
Sbjct: 159 GMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFV 276
A E T KSD+++FGV + E+ T ++ G QN
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIAT----RGMTPYPGVQNH--------------- 256
Query: 277 HLVDPLLHG---RYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
+ D LLHG + P CL+ + C + RP + + + L+ L+
Sbjct: 257 EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 119/273 (43%), Gaps = 29/273 (10%)
Query: 47 FREANLIGEGGFGKVYKGRLESGQ-LVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLV 104
F + IG+G FG+V+KG Q +VAIK ++ E ++ E+ +LS +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
G + ++ EY+ GS D L EP PL I +GL+YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPG--PLDETQIATILREILKGLDYLHSE 123
Query: 165 ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS 224
I+RD+K+AN+LL KL+DFG+A G + D +GT + APE
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 225 GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLH 284
K+DI+S G+ +EL G L+ + P P L
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLE 225
Query: 285 GRYPRRCLNYAVAVTAMCLNEEANFRPLINDIV 317
G Y + + A CLN+E +FRP +++
Sbjct: 226 GNYSKPLKEFVEA----CLNKEPSFRPTAKELL 254
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 64
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 118
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P T +S GT
Sbjct: 119 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GTL 171
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 220
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 119/273 (43%), Gaps = 29/273 (10%)
Query: 47 FREANLIGEGGFGKVYKGRLESGQ-LVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLV 104
F + IG+G FG+V+KG Q +VAIK ++ E ++ E+ +LS +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
G + ++ EY+ GS D L EP PL I +GL+YLH +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPG--PLDETQIATILREILKGLDYLHSE 138
Query: 165 ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS 224
I+RD+K+AN+LL KL+DFG+A G + D +GT + APE
Sbjct: 139 KK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 193
Query: 225 GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLH 284
K+DI+S G+ +EL G L+ + P P L
Sbjct: 194 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLE 240
Query: 285 GRYPRRCLNYAVAVTAMCLNEEANFRPLINDIV 317
G Y + + A CLN+E +FRP +++
Sbjct: 241 GNYSKPLKEFVEA----CLNKEPSFRPTAKELL 269
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 119/273 (43%), Gaps = 29/273 (10%)
Query: 47 FREANLIGEGGFGKVYKGRLESGQ-LVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLV 104
F + IG+G FG+V+KG Q +VAIK ++ E ++ E+ +LS +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
G + ++ EY+ GS D L EP PL I +GL+YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPG--PLDETQIATILREILKGLDYLHSE 123
Query: 165 ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS 224
I+RD+K+AN+LL KL+DFG+A G + D +GT + APE
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 225 GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLH 284
K+DI+S G+ +EL G L+ + P P L
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLE 225
Query: 285 GRYPRRCLNYAVAVTAMCLNEEANFRPLINDIV 317
G Y + + A CLN+E +FRP +++
Sbjct: 226 GNYSKPLKEFVEA----CLNKEPSFRPTAKELL 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + + VA+K L + + + + E+ M+ ++ H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP------------DQEPLSWNTRMKI 150
++ L+G CT ++ EY G+L ++L P +E +++ +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
ARG+EYL A+ I+RDL + N+L+ + K++DFGLA+ D +T
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T +SD++SFGV++ E+ T
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIK-----QLNHEGLQGHQEFIVEVLMLSLLH 99
N+R IG+G F KV R + +G+ VAIK QLN LQ + EV ++ +L+
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKILN 72
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H N+V L + L+ EY G + D+L +E + ++ + V A ++
Sbjct: 73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA-RSKFRQIVSA---VQ 128
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
Y H K +++RDLK+ N+LLD D N K++DFG + VG G Y AP
Sbjct: 129 YCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAP 182
Query: 220 EYAMSGKLT-LKSDIYSFGVVLLELITGRKAMD 251
E K + D++S GV+L L++G D
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + + VA+K L + + + + E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP------------DQEPLSWNTRMKI 150
++ L+G CT ++ EY G+L ++L P +E +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
ARG+EYL A+ I+RDL + N+L+ + K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T +SD++SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 119/273 (43%), Gaps = 29/273 (10%)
Query: 47 FREANLIGEGGFGKVYKGRLESGQ-LVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLV 104
F + IG+G FG+V+KG Q +VAIK ++ E ++ E+ +LS +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
G + ++ EY+ GS D L EP PL I +GL+YLH +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPG--PLDETQIATILREILKGLDYLHSE 143
Query: 165 ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS 224
I+RD+K+AN+LL KL+DFG+A G + D +GT + APE
Sbjct: 144 KK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 225 GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLH 284
K+DI+S G+ +EL G L+ + P P L
Sbjct: 199 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLE 245
Query: 285 GRYPRRCLNYAVAVTAMCLNEEANFRPLINDIV 317
G Y + + A CLN+E +FRP +++
Sbjct: 246 GNYSKPLKEFVEA----CLNKEPSFRPTAKELL 274
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 45 RNFREANLIGEGGFGKVYK----GRLESGQ--LVAIKQLNHEGLQGHQEFIVEVL--MLS 96
N ++G G FGKV G ++G VA+K L + +E ++ L M
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHL-------------------YDLEP 137
L H+N+V L+G CT L++EY G L ++L + E
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 138 DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL 197
D L++ + A A+G+E+L K+ ++RDL + N+L+ + K+ DFGLA+
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 198 GPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
N V + APE G T+KSD++S+G++L E+ +
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + + VA+K L + + + + E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP------------DQEPLSWNTRMKI 150
++ L+G CT ++ EY G+L ++L P +E +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
ARG+EYL A+ I+RDL + N+L+ + K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T +SD++SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 102/219 (46%), Gaps = 32/219 (14%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIK-----QLNHEGLQGHQEFIVEVLMLSLLH 99
N+R IG+G F KV R + +G+ VA+K QLN LQ + EV ++ +L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLN 71
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAAR--- 156
H N+V L + LV EY G + D+L + RMK A+
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA----------HGRMKEKEARAKFRQ 121
Query: 157 ---GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
++Y H K +++RDLK+ N+LLD D N K++DFG + G+ G
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGA 175
Query: 214 YGYCAPEYAMSGKLT-LKSDIYSFGVVLLELITGRKAMD 251
Y APE K + D++S GV+L L++G D
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + + VA+K L + + + + E+ M+ ++ H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP------------DQEPLSWNTRMKI 150
++ L+G CT ++ EY G+L ++L P +E +++ +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
ARG+EYL A+ I+RDL + N+L+ + K++DFGLA+ D +T
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T +SD++SFGV++ E+ T
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 21/218 (9%)
Query: 46 NFREANLIGEGGFGKVYK------GRLESGQLVAIKQLNHEGLQGHQEFIVEVL--MLSL 97
N + +G G FGKV + G+ ++ VA+K L +E ++ L M L
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYD----LEPD------QEPLSWNTR 147
H+N+V L+G CT G L++ EY G L + L LE D LS
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDL 166
Query: 148 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 207
+ + A+G+ +L A+ I+RD+ + N+LL N K+ DFGLA+ N V
Sbjct: 167 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 208 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T++SD++S+G++L E+ +
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 32/219 (14%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIK-----QLNHEGLQGHQEFIVEVLMLSLLH 99
N+R IG+G F KV R + +G+ VA++ QLN LQ + EV ++ +L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKVLN 71
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAAR--- 156
H N+V L + LV EY G + D+L + RMK A+
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA----------HGRMKEKEARAKFRQ 121
Query: 157 ---GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
++Y H K +++RDLK+ N+LLD D N K++DFG + G+ G+
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGS 175
Query: 214 YGYCAPEYAMSGKLT-LKSDIYSFGVVLLELITGRKAMD 251
Y APE K + D++S GV+L L++G D
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + + VA+K L + + + + E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP------------DQEPLSWNTRMKI 150
++ L+G CT ++ EY G+L ++L P +E +++ +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
ARG+EYL A+ I+RDL + N+L+ + K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T +SD++SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + + VA+K L + + + + E+ M+ ++ H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP------------DQEPLSWNTRMKI 150
++ L+G CT ++ EY G+L ++L P +E +++ +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
ARG+EYL A+ I+RDL + N+L+ + K++DFGLA+ D +T
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T +SD++SFGV++ E+ T
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + + VA+K L + + + + E+ M+ ++ H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP------------DQEPLSWNTRMKI 150
++ L+G CT ++ EY G+L ++L P +E +++ +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
ARG+EYL A+ I+RDL + N+L+ + K++DFGLA+ D +T
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T +SD++SFGV++ E+ T
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 12/209 (5%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H N+V L+ + ++ LV+E++ M L+D + PL + +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQL--LQGLA 120
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
+ H V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y AP
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 220 EYAMSGK-LTLKSDIYSFGVVLLELITGR 247
E + K + DI+S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 47 FREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLL-HHDNLV 104
F L+G G +G+VYKGR +++GQL AIK ++ G + +E E+ ML HH N+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIA 84
Query: 105 TLIGYCTS------GDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
T G DQ LV E+ GS+ D + + + + W I RGL
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGL 142
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
+LH VI+RD+K N+LL + KL DFG++ + +GT + A
Sbjct: 143 SHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVS--AQLDRTVGRRNTFIGTPYWMA 197
Query: 219 PEYAM-----SGKLTLKSDIYSFGVVLLELITG 246
PE KSD++S G+ +E+ G
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 32/219 (14%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIK-----QLNHEGLQGHQEFIVEVLMLSLLH 99
N+R IG+G F KV R + +G+ VA++ QLN LQ + EV ++ +L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKVLN 71
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAAR--- 156
H N+V L + LV EY G + D+L + RMK A+
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV----------AHGRMKEKEARAKFRQ 121
Query: 157 ---GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
++Y H K +++RDLK+ N+LLD D N K++DFG + G+ G+
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGS 175
Query: 214 YGYCAPEYAMSGKLT-LKSDIYSFGVVLLELITGRKAMD 251
Y APE K + D++S GV+L L++G D
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIK-----QLNHEGLQGHQEFIVEVLMLSLLH 99
N+R IG+G F KV R + +G+ VA+K QLN LQ + EV ++ +L+
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLN 64
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H N+V L + LV EY G + D+L +E + + + V A ++
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEA-RAKFRQIVSA---VQ 120
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
Y H K +++RDLK+ N+LLD D N K++DFG + G+ G+ Y AP
Sbjct: 121 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAP 174
Query: 220 EYAMSGKLT-LKSDIYSFGVVLLELITGRKAMD 251
E K + D++S GV+L L++G D
Sbjct: 175 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 25/215 (11%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + + VA+K L + + + + E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP------------DQEPLSWNTRMKI 150
++ L+G CT ++ EY G+L ++L P +E +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
ARG+EYL A+ I+RDL + N+L+ + +++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T +SD++SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 29/273 (10%)
Query: 47 FREANLIGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLV 104
F + + IG+G FG+VYKG + ++VAIK ++ E ++ E+ +LS +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
G + ++ EY+ GS D L +P PL I +GL+YLH +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLL---KPG--PLEETYIATILREILKGLDYLHSE 135
Query: 165 ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS 224
I+RD+K+AN+LL + KL+DFG+A G + D +GT + APE
Sbjct: 136 RK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 225 GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLH 284
K+DI+S G+ A++L+KG+ + + R K P L
Sbjct: 191 SAYDFKADIWSLGIT---------AIELAKGEPPNSDLHPMRVLFLIPKN----SPPTLE 237
Query: 285 GRYPRRCLNYAVAVTAMCLNEEANFRPLINDIV 317
G++ + + A CLN++ FRP +++
Sbjct: 238 GQHSKPFKEFVEA----CLNKDPRFRPTAKELL 266
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 12/209 (5%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H N+V L+ + ++ LV+E++ M L+D + PL + +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQL--LQGLA 119
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
+ H V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y AP
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 220 EYAMSGK-LTLKSDIYSFGVVLLELITGR 247
E + K + DI+S G + E++T R
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 63
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P T + GT
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC----GTL 170
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 103/197 (52%), Gaps = 14/197 (7%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G+G FGKVYK + E+G L A K + + + +++IVE+ +L+ H +V L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
+ ++ E+ P G+++ + +L+ T +I V + LE L+ + +I+
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGL------TEPQIQVVCRQMLEALNFLHSKRIIH 140
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT--- 228
RDLK+ N+L+ + + +L+DFG++ +GT + APE M +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKN--LKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 198
Query: 229 --LKSDIYSFGVVLLEL 243
K+DI+S G+ L+E+
Sbjct: 199 YDYKADIWSLGITLIEM 215
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 62
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 116
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P T + GT
Sbjct: 117 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 169
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 170 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 218
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 103/197 (52%), Gaps = 14/197 (7%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G+G FGKVYK + E+G L A K + + + +++IVE+ +L+ H +V L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
+ ++ E+ P G+++ + +L+ T +I V + LE L+ + +I+
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGL------TEPQIQVVCRQMLEALNFLHSKRIIH 132
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT--- 228
RDLK+ N+L+ + + +L+DFG++ +GT + APE M +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKN--LKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 190
Query: 229 --LKSDIYSFGVVLLEL 243
K+DI+S G+ L+E+
Sbjct: 191 YDYKADIWSLGITLIEM 207
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 68
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 122
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P T + GT
Sbjct: 123 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 175
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 176 DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 63
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P T + GT
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC----GTL 170
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 30/227 (13%)
Query: 46 NFREANLIGEGGFGKVYK------GRLESGQLVAIKQLNHEGLQGHQEFIVEVL--MLSL 97
N + +G G FGKV + G+ ++ VA+K L +E ++ L M L
Sbjct: 32 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 91
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLY---------DLEPDQE-------- 140
H+N+V L+G CT G L++ EY G L + L L P Q+
Sbjct: 92 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKED 151
Query: 141 --PLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG 198
PL + + A+G+ +L A+ I+RD+ + N+LL N K+ DFGLA+
Sbjct: 152 GRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 208
Query: 199 PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
N V + APE T++SD++S+G++L E+ +
Sbjct: 209 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 63
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P T + GT
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTL 170
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 63
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P T + GT
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTL 170
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 66
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 120
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P T + GT
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 173
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 67
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 121
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P T + GT
Sbjct: 122 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 174
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 223
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 66
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 120
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P T + GT
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 173
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 63
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P T + GT
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 170
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIK-----QLNHEGLQGHQEFIVEVLMLSLLH 99
N+R IG+G F KV R + +G+ VA+K QLN LQ + EV + +L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIXKVLN 71
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H N+V L + LV EY G + D+L +E + + + V A ++
Sbjct: 72 HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEA-RAKFRQIVSA---VQ 127
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
Y H K +++RDLK+ N+LLD D N K++DFG + G+ G Y AP
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAP 181
Query: 220 EYAMSGKLT-LKSDIYSFGVVLLELITGRKAMD 251
E K + D++S GV+L L++G D
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 64
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 118
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P T + GT
Sbjct: 119 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTL 171
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 220
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 68
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 122
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P T + GT
Sbjct: 123 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 175
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 16/234 (6%)
Query: 53 IGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IGEG G V R + SG+ VA+K ++ Q + EV+++ H N+V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
G++ ++ E++ G+L D + + ++E ++ + + L YLH + VI+
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQVRLNEEQIA-----TVCEAVLQALAYLHAQG---VIH 164
Query: 172 RDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS 231
RD+KS +ILL D KLSDFG + + ++GT + APE +
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFC--AQISKDVPKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 232 DIYSFGVVLLELITGRKA-MDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLH 284
DI+S G++++E++ G S Q + L P LK+ H V P+L
Sbjct: 223 DIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS----HKVSPVLR 272
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 89
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 143
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P + T + GT
Sbjct: 144 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTL 196
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 245
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 68
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 122
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P T + GT
Sbjct: 123 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTL 175
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 80
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 134
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P + T + GT
Sbjct: 135 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTL 187
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 188 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 236
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 22/203 (10%)
Query: 52 LIGE-GGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+IGE G FGKVYK + E+ L A K ++ + + ++++VE+ +L+ H N+V L+
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 110 CTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 169
+ ++ E+ G+++ + +LE PL+ + + L YLH + +
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKI 129
Query: 170 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR----VMGTYGYCAPEYAMSG 225
I+RDLK+ NIL D + KL+DFG++ NT + +GT + APE M
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVS-----AKNTRTXIQRRDSFIGTPYWMAPEVVMCE 184
Query: 226 K-----LTLKSDIYSFGVVLLEL 243
K+D++S G+ L+E+
Sbjct: 185 TSKDRPYDYKADVWSLGITLIEM 207
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 125/273 (45%), Gaps = 29/273 (10%)
Query: 47 FREANLIGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLV 104
F + IG+G FG+V+KG + Q+VAIK ++ E ++ E+ +LS +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
G G + ++ EY+ GS D L D+ ++ T +K + +GL+YLH +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIA--TMLKEIL---KGLDYLHSE 139
Query: 165 ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS 224
I+RD+K+AN+LL + KL+DFG+A G + D +GT + APE
Sbjct: 140 KK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQ 194
Query: 225 GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLH 284
K+DI+S G+ +EL G L+ + P P L
Sbjct: 195 SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-------------PTLV 241
Query: 285 GRYPRRCLNYAVAVTAMCLNEEANFRPLINDIV 317
G + + + A CLN++ +FRP +++
Sbjct: 242 GDFTKSFKEFIDA----CLNKDPSFRPTAKELL 270
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 139/314 (44%), Gaps = 45/314 (14%)
Query: 35 FTFRELAIATRNFREA---------NLIGEGGFGKVYKGRLE-SGQ---LVAIKQLNHEG 81
FTF + A R F + +IG G FG+V GRL+ G+ VAIK L G
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKA-G 68
Query: 82 LQGHQ--EFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQ 139
Q +F+ E ++ H N++ L G T +++ EYM GSL+ L +
Sbjct: 69 YTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF---LRKND 125
Query: 140 EPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGP 199
+ + + G G++YL ++ ++RDL + NIL++++ K+SDFG++++
Sbjct: 126 GRFTVIQLVGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRV-- 180
Query: 200 VGDNTHVSTRVMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQ 256
+ D+ + G + APE K T SD++S+G+V+ E+ +S G+
Sbjct: 181 LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV--------MSYGE 232
Query: 257 GEQNLVSWSRPFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLIND 315
RP+ + + ++ P C + C +E + RP
Sbjct: 233 ---------RPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQ 283
Query: 316 IVVALDYLVSQRDS 329
IV LD L+ +S
Sbjct: 284 IVNMLDKLIRNPNS 297
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 60
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 114
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P T + GT
Sbjct: 115 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTL 167
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 168 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 216
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + + VA+K L + + + + E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD------------QEPLSWNTRMKI 150
++ L+G CT ++ Y G+L ++L P +E +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
ARG+EYL A+ I+RDL + N+L+ + K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T +SD++SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 52 LIGEGGFGKVYKGRLE----SGQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTL 106
+IG G FG+V GRL+ VAIK L + + +F+ E ++ H N+V L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 107 IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKAN 166
G T G ++V E+M G+L+ L + + ++ G A G+ YL A+
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR---GIAAGMRYL---AD 163
Query: 167 PPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAM 223
++RDL + NIL++++ K+SDFGL+++ + D+ G + APE
Sbjct: 164 MGYVHRDLAARNILVNSNLVCKVSDFGLSRV--IEDDPEAVYTTTGGKIPVRWTAPEAIQ 221
Query: 224 SGKLTLKSDIYSFGVVLLELIT 245
K T SD++S+G+V+ E+++
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMS 243
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 51 NLIGEGGFGKVYKGR-LESGQ---LVAIKQLNH-EGLQGHQEFIVEVLMLSLLHHDNLVT 105
+IG+G FG VY G ++ Q AIK L+ +Q + F+ E L++ L+H N++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
LIG + L + +P D L + Q + + + ARG+EYL A
Sbjct: 87 LIGIMLPPEG--LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---A 141
Query: 166 NPPVIYRDLKSANILLDNDFNPKLSDFGLAK------LGPVGDNTHVSTRVMGTYGYCAP 219
++RDL + N +LD F K++DFGLA+ V + H V T A
Sbjct: 142 EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT----AL 197
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELIT 245
E + + T KSD++SFGV+L EL+T
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A+
Sbjct: 86 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 138
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 139 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 195
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R ++ + + A+K QL G++ HQ EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 63
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P + GT
Sbjct: 118 ANALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTL 170
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRIS 219
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 72 VAIKQLNHEGLQ-GHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 130
VAIK++N E Q E + E+ +S HH N+V+ D+ LV + + GS+ D
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 131 HLYDL----EPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN 186
+ + E L +T I GLEYLH I+RD+K+ NILL D +
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 159
Query: 187 PKLSDFGL-AKLGPVGDNTHVSTR--VMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLE 242
+++DFG+ A L GD T R +GT + APE + K+DI+SFG+ +E
Sbjct: 160 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 219
Query: 243 LITG 246
L TG
Sbjct: 220 LATG 223
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 72 VAIKQLNHEGLQ-GHQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLED 130
VAIK++N E Q E + E+ +S HH N+V+ D+ LV + + GS+ D
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 131 HLYDL----EPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN 186
+ + E L +T I GLEYLH I+RD+K+ NILL D +
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 154
Query: 187 PKLSDFGL-AKLGPVGDNTHVSTR--VMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLE 242
+++DFG+ A L GD T R +GT + APE + K+DI+SFG+ +E
Sbjct: 155 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 214
Query: 243 LITG 246
L TG
Sbjct: 215 LATG 218
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 46 NFREANLIGEGGFGKVYK------GRLESGQLVAIKQLNHEGLQGHQEFIVEVL--MLSL 97
N + +G G FGKV + G+ ++ VA+K L +E ++ L M L
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYD----LEPD------QEPLSWNTR 147
H+N+V L+G CT G L++ EY G L + L LE D S
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDL 166
Query: 148 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 207
+ + A+G+ +L A+ I+RD+ + N+LL N K+ DFGLA+ N V
Sbjct: 167 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 208 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T++SD++S+G++L E+ +
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 128
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 114/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L++ + MP G L D++ + + + Q L+W V A+
Sbjct: 77 NPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAK 129
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 130 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 114/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L++ + MP G L D++ + + + Q L+W V A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 130
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 114/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L++ + MP G L D++ + + + Q L+W V A+
Sbjct: 80 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 132
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 133 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 189
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 114/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L++ + MP G L D++ + + + Q L+W V A+
Sbjct: 77 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 129
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 130 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 114/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L++ + MP G L D++ + + + Q L+W V A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 128
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 36/290 (12%)
Query: 51 NLIGEGGFGKVYKGRLE-SGQ---LVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVT 105
+IG G FG+V G L+ G+ VAIK L + + +F+ E ++ H N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L G T +++ E+M GSL+ L + + + + G A G++YL A
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSF---LRQNDGQFTVIQLVGMLRGIAAGMKYL---A 126
Query: 166 NPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPE 220
+ ++R L + NIL++++ K+SDFGL++ + D+T T G + APE
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLSRF--LEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 221 YAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLV 279
K T SD++S+G+V+ E+++ GE RP+ + ++ +
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMS----------YGE-------RPYWDMTNQDVINAI 227
Query: 280 DPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDS 329
+ P C + + C ++ N RP IV LD ++ +S
Sbjct: 228 EQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNS 277
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A+
Sbjct: 70 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 122
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 123 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAK 128
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 130
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 128
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 103/229 (44%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 68
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P G + L L +Q ++ T +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ 122
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P + T + GT
Sbjct: 123 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTL 175
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A+
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 131
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 114/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L++ + MP G L D++ + + + Q L+W V A+
Sbjct: 79 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 131
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A+
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 131
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 53 IGEGGFGKVY--------KGRLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLL-HHDN 102
+GEG FG+V K + + VA+K L + + + + E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD------------QEPLSWNTRMKI 150
++ L+G CT ++ Y G+L ++L P +E +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
ARG+EYL A+ I+RDL + N+L+ + K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T +SD++SFGV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 21/216 (9%)
Query: 40 LAIATRNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGL---QGHQEFIVEVLML 95
+ + +F +IG GGFG+VY R ++G++ A+K L+ + + QG + E +ML
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 96 SLLHHDN--LVTLIGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-A 151
SL+ + + + Y + D+ + + M G L HL Q + M+ A
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYA 298
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM 211
GLE++H N V+YRDLK ANILLD + ++SD GLA H S +
Sbjct: 299 AEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---V 351
Query: 212 GTYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITG 246
GT+GY APE G +D +S G +L +L+ G
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A+
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 135
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 63
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P + GT
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTL 170
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A+
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 131
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 21/216 (9%)
Query: 40 LAIATRNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGL---QGHQEFIVEVLML 95
+ + +F +IG GGFG+VY R ++G++ A+K L+ + + QG + E +ML
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 96 SLLHHDN--LVTLIGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-A 151
SL+ + + + Y + D+ + + M G L HL Q + M+ A
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYA 297
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM 211
GLE++H N V+YRDLK ANILLD + ++SD GLA H S +
Sbjct: 298 AEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---V 350
Query: 212 GTYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITG 246
GT+GY APE G +D +S G +L +L+ G
Sbjct: 351 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A+
Sbjct: 82 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 134
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 135 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 191
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 50 ANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQ---EFIVEVLMLSLLHHDNLVT 105
+ +G G FGKV G+ E +G VA+K LN + ++ + E+ L L H +++
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L ++ +V EY+ G L D++ L ++ G++Y H
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 166 NPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG 225
V++RDLK N+LLD N K++DFGL+ + G+ S G+ Y APE +SG
Sbjct: 137 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPE-VISG 189
Query: 226 KLTL--KSDIYSFGVVLLELITGRKAMD 251
+L + DI+S GV+L L+ G D
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 44/222 (19%)
Query: 46 NFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDN 102
NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 103 LVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLSWNT 146
+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL----------- 112
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
+GL + H V++RDLK N+L++ + KL+DFGLA+ V T+
Sbjct: 113 --------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 160
Query: 207 STRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T + T Y APE + K + DI+S G + E++T R
Sbjct: 161 -THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 21/216 (9%)
Query: 40 LAIATRNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGL---QGHQEFIVEVLML 95
+ + +F +IG GGFG+VY R ++G++ A+K L+ + + QG + E +ML
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 96 SLLHHDN--LVTLIGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-A 151
SL+ + + + Y + D+ + + M G L HL Q + M+ A
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYA 298
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM 211
GLE++H N V+YRDLK ANILLD + ++SD GLA H S +
Sbjct: 299 AEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---V 351
Query: 212 GTYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITG 246
GT+GY APE G +D +S G +L +L+ G
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 21/216 (9%)
Query: 40 LAIATRNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGL---QGHQEFIVEVLML 95
+ + +F +IG GGFG+VY R ++G++ A+K L+ + + QG + E +ML
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 96 SLLHHDN--LVTLIGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-A 151
SL+ + + + Y + D+ + + M G L HL Q + M+ A
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYA 298
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM 211
GLE++H N V+YRDLK ANILLD + ++SD GLA H S +
Sbjct: 299 AEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---V 351
Query: 212 GTYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITG 246
GT+GY APE G +D +S G +L +L+ G
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 66
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 120
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P + GT
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTL 173
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A+
Sbjct: 101 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 153
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 154 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 210
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 65
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 119
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K+++FG + P T + GT
Sbjct: 120 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTL 172
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 221
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 12/209 (5%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H N+V L+ + ++ LV+E++ M L+ + PL + +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQL--LQGLA 118
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
+ H V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y AP
Sbjct: 119 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 220 EYAMSGK-LTLKSDIYSFGVVLLELITGR 247
E + K + DI+S G + E++T R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 12/209 (5%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H N+V L+ + ++ LV+E++ M L+ + PL + +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQL--LQGLA 120
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
+ H V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y AP
Sbjct: 121 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 220 EYAMSGK-LTLKSDIYSFGVVLLELITGR 247
E + K + DI+S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 66
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 120
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K+++FG + P T + GT
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTL 173
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 63
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 117
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P + GT
Sbjct: 118 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTL 170
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 44/222 (19%)
Query: 46 NFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDN 102
NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 103 LVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLSWNT 146
+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL----------- 112
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
+GL + H V++RDLK N+L++ + KL+DFGLA+ V T+
Sbjct: 113 --------LQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 160
Query: 207 STRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T + T Y APE + K + DI+S G + E++T R
Sbjct: 161 -THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 44/222 (19%)
Query: 46 NFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDN 102
NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 103 LVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLSWNT 146
+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL----------- 119
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
+GL + H V++RDLK N+L++ + KL+DFGLA+ V T+
Sbjct: 120 --------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 167
Query: 207 STRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T + T Y APE + K + DI+S G + E++T R
Sbjct: 168 -THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 65
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 119
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P + GT
Sbjct: 120 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGTL 172
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 221
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 96/211 (45%), Gaps = 15/211 (7%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEF---IVEVLMLSL 97
+ +F L+G+G FGKV R + +G+ A+K L E + E + E +L
Sbjct: 5 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-AVGAAR 156
H L L + D+ V EY G L HL +E + R +
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS 119
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
LEYLH + V+YRD+K N++LD D + K++DFGL K G + D + T GT Y
Sbjct: 120 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT-FCGTPEY 174
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
APE D + GVV+ E++ GR
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 96/211 (45%), Gaps = 15/211 (7%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEF---IVEVLMLSL 97
+ +F L+G+G FGKV R + +G+ A+K L E + E + E +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-AVGAAR 156
H L L + D+ V EY G L HL +E + R +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS 116
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
LEYLH + V+YRD+K N++LD D + K++DFGL K G + D + T GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT-FCGTPEY 171
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
APE D + GVV+ E++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 44/226 (19%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLL 98
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPL 142
+H N+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------- 116
Query: 143 SWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGD 202
+GL + H V++RDLK N+L++ + KL+DFGLA+ V
Sbjct: 117 ------------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 161
Query: 203 NTHVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T+ T + T Y APE + K + DI+S G + E++T R
Sbjct: 162 RTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 66
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 120
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P + + GT
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAALCGTL 173
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 44/222 (19%)
Query: 46 NFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDN 102
NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 103 LVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLSWNT 146
+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL----------- 112
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
+GL + H V++RDLK N+L++ + KL+DFGLA+ V T+
Sbjct: 113 --------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 160
Query: 207 STRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T + T Y APE + K + DI+S G + E++T R
Sbjct: 161 -THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 44/222 (19%)
Query: 46 NFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDN 102
NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 103 LVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLSWNT 146
+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL----------- 111
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
+GL + H V++RDLK N+L++ + KL+DFGLA+ V T+
Sbjct: 112 --------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 159
Query: 207 STRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T + T Y APE + K + DI+S G + E++T R
Sbjct: 160 -THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 44/222 (19%)
Query: 46 NFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDN 102
NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 103 LVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLSWNT 146
+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL----------- 119
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
+GL + H V++RDLK N+L++ + KL+DFGLA+ V T+
Sbjct: 120 --------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 167
Query: 207 STRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T + T Y APE + K + DI+S G + E++T R
Sbjct: 168 -THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 12/209 (5%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H N+V L+ + ++ LV+E++ L+D + PL + +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQL--LQGLA 117
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
+ H V++RDLK N+L++ + KL+DFGLA+ V T+ V T Y AP
Sbjct: 118 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 220 EYAMSGK-LTLKSDIYSFGVVLLELITGR 247
E + K + DI+S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 44/222 (19%)
Query: 46 NFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDN 102
NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 103 LVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLSWNT 146
+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL----------- 111
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
+GL + H V++RDLK N+L++ + KL+DFGLA+ V T+
Sbjct: 112 --------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 159
Query: 207 STRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T + T Y APE + K + DI+S G + E++T R
Sbjct: 160 -THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 44/225 (19%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLS 143
H N+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 113
Query: 144 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN 203
+GL + H V++RDLK N+L++ + KL+DFGLA+ V
Sbjct: 114 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 159
Query: 204 THVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T+ T + T Y APE + K + DI+S G + E++T R
Sbjct: 160 TY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 66
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 120
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P + GT
Sbjct: 121 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTL 173
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQ----LVAIKQL-NHEGLQGHQEFIVEVLMLSLLH 99
R+ ++G G FG VYKG + G+ VAIK L + + ++E + E +++ +
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG 77
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP---DQEPLSWNTRMKIAVGAAR 156
+ L+G C + +L V + MP G L DH+ + Q+ L+W ++ A+
Sbjct: 78 SPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AK 130
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + + K++DFGLA+L + + + + +
Sbjct: 131 GMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKW 187
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + + T +SD++S+GV + EL+T G K D
Sbjct: 188 MALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 96/211 (45%), Gaps = 15/211 (7%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEF---IVEVLMLSL 97
+ +F L+G+G FGKV R + +G+ A+K L E + E + E +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-AVGAAR 156
H L L + D+ V EY G L HL +E + R +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS 116
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
LEYLH + V+YRD+K N++LD D + K++DFGL K G + D + T GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT-FCGTPEY 171
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
APE D + GVV+ E++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 23/202 (11%)
Query: 53 IGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL 106
+G+G FG VY R + + A+K QL G++ + EV + S L H N++ L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE--HQLRREVEIQSHLRHPNILRL 77
Query: 107 IGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGAARGLEYLHCK 164
GY + L+ EY P+G++ L L +Q ++ T + A L Y H K
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL------ANALSYCHSK 131
Query: 165 ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS 224
VI+RD+K N+LL ++ K++DFG + P T + GT Y PE
Sbjct: 132 R---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 184
Query: 225 GKLTLKSDIYSFGVVLLELITG 246
K D++S GV+ E + G
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVG 206
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLESGQL-VAIKQL---NHEGLQGHQEFIVEVLMLSL 97
I ++ + +G GG VY + VAIK + E + + F EV S
Sbjct: 8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQ 67
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
L H N+V++I D LV EY+ +L +++ PLS +T + G
Sbjct: 68 LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI----ESHGPLSVDTAINFTNQILDG 123
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
+++ H + +++RD+K NIL+D++ K+ DFG+AK T + V+GT Y
Sbjct: 124 IKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYF 179
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITGR 247
+PE A +DIYS G+VL E++ G
Sbjct: 180 SPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 44/222 (19%)
Query: 46 NFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDN 102
NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 103 LVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLSWNT 146
+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL----------- 112
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
+GL + H V++RDLK N+L++ + KL+DFGLA+ V T+
Sbjct: 113 --------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 160
Query: 207 STRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T + T Y APE + K + DI+S G + E++T R
Sbjct: 161 -THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 12/217 (5%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQ---GHQEFIVEVLMLSL 97
+ FR+ ++G+GGFG+V ++ +G++ A K+L + ++ G + E +L
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
++ +V+L + D LV M G L+ H+Y + Q + A G
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM--GQAGFPEARAVFYAAEICCG 298
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
LE LH ++YRDLK NILLD+ + ++SD GLA P G + RV GT GY
Sbjct: 299 LEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV-GTVGYM 352
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSK 254
APE + + T D ++ G +L E+I G+ K
Sbjct: 353 APEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 8/205 (3%)
Query: 47 FREANLIGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLV 104
+ + IGEG +G V + VAIK+++ Q + Q + E+ +L H+N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
+ + + Y+ +E LY L Q+ LS + RGL+Y+H
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ-LSNDHICYFLYQILRGLKYIH-S 162
Query: 165 ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAM 223
AN V++RDLK +N+L++ + K+ DFGLA++ P D+T T + T Y APE +
Sbjct: 163 AN--VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 224 SGKLTLKS-DIYSFGVVLLELITGR 247
+ K KS DI+S G +L E+++ R
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 64
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 118
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P + + GT
Sbjct: 119 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRDTLCGTL 171
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 220
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLS 143
H N+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 112
Query: 144 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN 203
+GL + H V++RDLK N+L++ + KL+DFGLA+ V
Sbjct: 113 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 204 THVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T+ V T Y APE + K + DI+S G + E++T R
Sbjct: 159 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 112/216 (51%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A
Sbjct: 73 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAE 125
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 126 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 182
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLS 143
H N+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 114
Query: 144 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN 203
+GL + H V++RDLK N+L++ + KL+DFGLA+ V
Sbjct: 115 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 160
Query: 204 THVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T+ V T Y APE + K + DI+S G + E++T R
Sbjct: 161 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 12/217 (5%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQ---GHQEFIVEVLMLSL 97
+ FR+ ++G+GGFG+V ++ +G++ A K+L + ++ G + E +L
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
++ +V+L + D LV M G L+ H+Y + Q + A G
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM--GQAGFPEARAVFYAAEICCG 298
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
LE LH + ++YRDLK NILLD+ + ++SD GLA P G + RV GT GY
Sbjct: 299 LEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV-GTVGYM 352
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSK 254
APE + + T D ++ G +L E+I G+ K
Sbjct: 353 APEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 143
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 144 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 114/223 (51%), Gaps = 25/223 (11%)
Query: 40 LAIATRNF-----REANLIGEGGFGKV-YKGRLESGQLVAIKQLNHEGLQG---HQEFIV 90
+AI+ R+ RE +GEG FGKV ++ Q VA+K ++ + L+ H
Sbjct: 1 MAISKRHIGPYIIRET--LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVER 58
Query: 91 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 150
E+ L LL H +++ L T+ ++V EY G L D++ + ++ ++ + +
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAG-GELFDYIVE----KKRMTEDEGRRF 113
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
+EY H +++RDLK N+LLD++ N K++DFGL+ + G+ S
Sbjct: 114 FQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC-- 168
Query: 211 MGTYGYCAPEYAMSGKLTL--KSDIYSFGVVLLELITGRKAMD 251
G+ Y APE ++GKL + D++S G+VL ++ GR D
Sbjct: 169 -GSPNYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLS 143
H N+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 114
Query: 144 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN 203
+GL + H V++RDLK N+L++ + KL+DFGLA+ V
Sbjct: 115 -----------LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR 160
Query: 204 THVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T+ V T Y APE + K + DI+S G + E++T R
Sbjct: 161 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLS 143
H N+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 112
Query: 144 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN 203
+GL + H V++RDLK N+L++ + KL+DFGLA+ V
Sbjct: 113 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 204 THVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T+ V T Y APE + K + DI+S G + E++T R
Sbjct: 159 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLS 143
H N+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 112
Query: 144 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN 203
+GL + H V++RDLK N+L++ + KL+DFGLA+ V
Sbjct: 113 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 204 THVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T+ V T Y APE + K + DI+S G + E++T R
Sbjct: 159 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 89
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P+G++ L L +Q ++ T +
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ 143
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P + GT
Sbjct: 144 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD----LCGTL 196
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 245
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 141
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 142 SAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLS 143
H N+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 115
Query: 144 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN 203
+GL + H V++RDLK N+L++ + KL+DFGLA+ V
Sbjct: 116 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 161
Query: 204 THVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T+ V T Y APE + K + DI+S G + E++T R
Sbjct: 162 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLS 143
H N+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 114
Query: 144 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN 203
+GL + H V++RDLK N+L++ + KL+DFGLA+ V
Sbjct: 115 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 160
Query: 204 THVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T+ V T Y APE + K + DI+S G + E++T R
Sbjct: 161 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLS 143
H N+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 113
Query: 144 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN 203
+GL + H V++RDLK N+L++ + KL+DFGLA+ V
Sbjct: 114 -----------LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR 159
Query: 204 THVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T+ V T Y APE + K + DI+S G + E++T R
Sbjct: 160 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLS 143
H N+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQL-------- 115
Query: 144 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN 203
+GL + H V++RDLK N+L++ + KL+DFGLA+ V
Sbjct: 116 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 161
Query: 204 THVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T+ V T Y APE + K + DI+S G + E++T R
Sbjct: 162 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 141
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 142 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLS 143
H N+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 116
Query: 144 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN 203
+GL + H V++RDLK N+L++ + KL+DFGLA+ V
Sbjct: 117 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 162
Query: 204 THVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T+ V T Y APE + K + DI+S G + E++T R
Sbjct: 163 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLS 143
H N+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 115
Query: 144 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN 203
+GL + H V++RDLK N+L++ + KL+DFGLA+ V
Sbjct: 116 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 161
Query: 204 THVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T+ V T Y APE + K + DI+S G + E++T R
Sbjct: 162 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLS 143
H N+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 112
Query: 144 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN 203
+GL + H V++RDLK N+L++ + KL+DFGLA+ V
Sbjct: 113 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 204 THVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T+ V T Y APE + K + DI+S G + E++T R
Sbjct: 159 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 44/222 (19%)
Query: 46 NFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDN 102
NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 103 LVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLSWNT 146
+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL----------- 111
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
+GL + H V++RDLK N+L++ + KL+DFGLA+ V T+
Sbjct: 112 --------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 160
Query: 207 STRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
V T Y APE + K + DI+S G + E++T R
Sbjct: 161 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 44/222 (19%)
Query: 46 NFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDN 102
NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 103 LVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLSWNT 146
+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL----------- 111
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
+GL + H V++RDLK N+L++ + KL+DFGLA+ V T+
Sbjct: 112 --------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 160
Query: 207 STRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
V T Y APE + K + DI+S G + E++T R
Sbjct: 161 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS 142
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 143 -AN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLS 143
H N+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 113
Query: 144 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN 203
+GL + H V++RDLK N+L++ + KL+DFGLA+ V
Sbjct: 114 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 159
Query: 204 THVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T+ V T Y APE + K + DI+S G + E++T R
Sbjct: 160 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS 142
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 143 -AN--VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 44/222 (19%)
Query: 46 NFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDN 102
NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 103 LVTLIGYCTSGDQRLLVYEY----------------MPMGSLEDHLYDLEPDQEPLSWNT 146
+V L+ + ++ LV+E+ +P+ ++ +L+ L
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQL----------- 111
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
+GL + H V++RDLK N+L++ + KL+DFGLA+ V T+
Sbjct: 112 --------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 159
Query: 207 STRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T + T Y APE + K + DI+S G + E++T R
Sbjct: 160 -THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 85
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 143
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 144 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 44/222 (19%)
Query: 46 NFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDN 102
NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 103 LVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLSWNT 146
+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL----------- 113
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
+GL + H V++RDLK N+L++ + KL+DFGLA+ V T+
Sbjct: 114 --------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 162
Query: 207 STRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
V T Y APE + K + DI+S G + E++T R
Sbjct: 163 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 161
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 162 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 143
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 144 SAN--VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 145
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 146 SAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 146
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 147 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 204
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 147
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 148 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 205
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 206 LNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 138
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 139 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 196
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 197 LNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 145
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 146 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIHS 146
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 147 -AN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 91
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 149
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 150 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 207
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 208 LNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 141
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 142 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 139
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 140 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L++ + MP G L D++ + + + Q L+W V A+
Sbjct: 80 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 132
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFG AKL + + + +
Sbjct: 133 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 189
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 102/229 (44%), Gaps = 23/229 (10%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLS 96
A +F +G+G FG VY R + + + A+K QL G++ HQ EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQ-LRREVEIQS 68
Query: 97 LLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP--DQEPLSWNTRMKIAVGA 154
L H N++ L GY + L+ EY P G + L L +Q ++ T +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ 122
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
A L Y H K VI+RD+K N+LL + K++DFG + P + + GT
Sbjct: 123 ANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLXGTL 175
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE K D++S GV+ E + G+ + + Q +S
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 139
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 140 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 112/216 (51%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++ G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 128
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 43 ATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLH 99
+ NF++ IGEG +G VYK R + +G++VA+K+ L+ E I E+ +L L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 100 HDNLVTLIGYCTSGDQRLLVYEY----------------MPMGSLEDHLYDLEPDQEPLS 143
H N+V L+ + ++ LV+E+ +P+ ++ +L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQL-------- 115
Query: 144 WNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN 203
+GL + H V++RDLK N+L++ + KL+DFGLA+ V
Sbjct: 116 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 161
Query: 204 THVSTRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T+ V T Y APE + K + DI+S G + E++T R
Sbjct: 162 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++ G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L++ + MP G L D++ + + + Q L+W V A+
Sbjct: 83 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 135
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L++ + MP G L D++ + + + Q L+W V A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 130
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFG AKL + + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 112/216 (51%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AI +L + ++E + E +++ +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A+
Sbjct: 110 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 162
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 163 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 219
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 220 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L++ + MP G L D++ + + + Q L+W V A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 130
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFG AKL + + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 112/216 (51%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++ G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A+
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 135
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFGLAKL + + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEF---IVEVLMLSL 97
+ F L+G+G FGKV + + +G+ A+K L E + E + E +L
Sbjct: 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-AVGAAR 156
H L L + D+ V EY G L HL +E + R +
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVS 259
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
L+YLH + N V+YRDLK N++LD D + K++DFGL K G + D + T GT Y
Sbjct: 260 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKT-FCGTPEY 315
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
APE D + GVV+ E++ GR
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 112/216 (51%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 130
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFG AKL + + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 112/216 (51%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A+
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 135
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFG AKL + + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 192
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 112/216 (51%), Gaps = 20/216 (9%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLV----AIKQLNH-EGLQGHQEFIVEVLMLSLLH 99
F++ ++G G FG VYKG + G+ V AIK+L + ++E + E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAAR 156
+ ++ L+G C + +L+ + MP G L D++ + + + Q L+W V A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 128
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+ YL + +++RDL + N+L+ + K++DFG AKL + + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 185
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMD 251
A E + T +SD++S+GV + EL+T G K D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH-LSNDHICYFLYQILRGLKYIH- 145
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 146 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 136/304 (44%), Gaps = 38/304 (12%)
Query: 38 RELA--IATRNFREANLIGEGGFGKVYKGRLE-SGQ---LVAIKQLNHEGLQGHQ--EFI 89
RE A I + +IG G FG+V GRL+ G+ VAIK L G Q +F+
Sbjct: 5 REFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKA-GYTDKQRRDFL 63
Query: 90 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 149
E ++ H N++ L G T +++ EYM GSL+ L + + +
Sbjct: 64 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF---LRKNDGRFTVIQLVG 120
Query: 150 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR 209
+ G G++YL ++ ++RDL + NIL++++ K+SDFG++++ + D+ +
Sbjct: 121 MLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRV--LEDDPEAAYT 175
Query: 210 VMG---TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSR 266
G + APE K T SD++S+G+V+ E+++ GE R
Sbjct: 176 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS----------YGE-------R 218
Query: 267 PFLK-DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
P+ + + ++ P C + C +E + RP IV LD L+
Sbjct: 219 PYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIR 278
Query: 326 QRDS 329
+S
Sbjct: 279 NPNS 282
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEF---IVEVLMLSL 97
+ F L+G+G FGKV + + +G+ A+K L E + E + E +L
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-AVGAAR 156
H L L + D+ V EY G L HL +E + R +
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVS 262
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
L+YLH + N V+YRDLK N++LD D + K++DFGL K G + D + T GT Y
Sbjct: 263 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKT-FCGTPEY 318
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
APE D + GVV+ E++ GR
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 134/324 (41%), Gaps = 51/324 (15%)
Query: 36 TFRELAIATRNFREANLI-----GEGGFGKVYKG-----RLESG-QLVAIKQLNHEGLQG 84
F+ L F NL+ GEG FGKV K + +G VA+K L
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 85 H-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE------- 136
++ + E +L ++H +++ L G C+ LL+ EY GSL L +
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 137 -------------PDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN 183
PD+ L+ + A ++G++YL A +++RDL + NIL+
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAE 185
Query: 184 DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 243
K+SDFGL++ D+ ++ + A E T +SD++SFGV+L E+
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 244 ITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCL 303
+T L P + ++ F +L+ P C + C
Sbjct: 246 VT---------------LGGNPYPGIPPERLF-NLLKTGHRMERPDNCSEEMYRLMLQCW 289
Query: 304 NEEANFRPLINDIVVALDYLVSQR 327
+E + RP+ DI L+ ++ +R
Sbjct: 290 KQEPDKRPVFADISKDLEKMMVKR 313
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 134/324 (41%), Gaps = 51/324 (15%)
Query: 36 TFRELAIATRNFREANLI-----GEGGFGKVYKG-----RLESG-QLVAIKQLNHEGLQG 84
F+ L F NL+ GEG FGKV K + +G VA+K L
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 85 H-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE------- 136
++ + E +L ++H +++ L G C+ LL+ EY GSL L +
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 137 -------------PDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN 183
PD+ L+ + A ++G++YL A +++RDL + NIL+
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAE 185
Query: 184 DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 243
K+SDFGL++ D+ ++ + A E T +SD++SFGV+L E+
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 244 ITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCL 303
+T L P + ++ F +L+ P C + C
Sbjct: 246 VT---------------LGGNPYPGIPPERLF-NLLKTGHRMERPDNCSEEMYRLMLQCW 289
Query: 304 NEEANFRPLINDIVVALDYLVSQR 327
+E + RP+ DI L+ ++ +R
Sbjct: 290 KQEPDKRPVFADISKDLEKMMVKR 313
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 43 ATRNFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGH-QEFIVEVLMLSLLHH 100
++ F++ +G G + VYKG +G VA+K++ + +G I E+ ++ L H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEP--LSWNTRMKIAVGAARGL 158
+N+V L + ++ LV+E+M L+ ++ P L N +GL
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
+ H +++RDLK N+L++ KL DFGLA+ + NT S V T Y A
Sbjct: 122 AFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLWYRA 176
Query: 219 PEYAMSGKLTLKS-DIYSFGVVLLELITGR 247
P+ M + S DI+S G +L E+ITG+
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 131/289 (45%), Gaps = 36/289 (12%)
Query: 51 NLIGEGGFGKVYKGRLE-SGQ---LVAIKQLNHEGLQGHQ--EFIVEVLMLSLLHHDNLV 104
+IG G FG+V GRL+ G+ VAIK L G Q +F+ E ++ H N++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLK-AGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
L G T +++ EYM GSL+ L + + + + G G++YL
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAF---LRKNDGRFTVIQLVGMLRGIGSGMKYL--- 126
Query: 165 ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEY 221
++ ++RDL + NIL++++ K+SDFG++++ + D+ + G + APE
Sbjct: 127 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRV--LEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 222 AMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-DQKKFVHLVD 280
K T SD++S+G+V+ E+++ GE RP+ + + ++
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMS----------YGE-------RPYWDMSNQDVIKAIE 227
Query: 281 PLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDS 329
P C + C +E + RP IV LD L+ +S
Sbjct: 228 EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNS 276
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEF---IVEVLMLSL 97
+ +F L+G+G FGKV R + +G+ A+K L E + E + E +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-AVGAAR 156
H L L + D+ V EY G L HL +E + R +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS 116
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
LEYLH + V+YRD+K N++LD D + K++DFGL K G + D + GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKX-FCGTPEY 171
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
APE D + GVV+ E++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEF---IVEVLMLSL 97
+ +F L+G+G FGKV R + +G+ A+K L E + E + E +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-AVGAAR 156
H L L + D+ V EY G L HL +E + R +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS 116
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
LEYLH + V+YRD+K N++LD D + K++DFGL K G + D + GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKX-FCGTPEY 171
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
APE D + GVV+ E++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 44/222 (19%)
Query: 46 NFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDN 102
NF++ IGEG +G VYK R + +G++VA+ + L+ E I E+ +L L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 103 LVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLSWNT 146
+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL----------- 112
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
+GL + H V++RDLK N+L++ + KL+DFGLA+ V T+
Sbjct: 113 --------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 160
Query: 207 STRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T + T Y APE + K + DI+S G + E++T R
Sbjct: 161 -THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 44/222 (19%)
Query: 46 NFREANLIGEGGFGKVYKGRLE-SGQLVAIKQ--LNHEGLQGHQEFIVEVLMLSLLHHDN 102
NF++ IGEG +G VYK R + +G++VA+ + L+ E I E+ +L L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 103 LVTLIGYCTSGDQRLLVYEYM----------------PMGSLEDHLYDLEPDQEPLSWNT 146
+V L+ + ++ LV+E++ P+ ++ +L+ L
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL----------- 111
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
+GL + H V++RDLK N+L++ + KL+DFGLA+ V T+
Sbjct: 112 --------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 159
Query: 207 STRVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
T + T Y APE + K + DI+S G + E++T R
Sbjct: 160 -THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAI++++ Q + Q + E+ +L H+N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 145
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 146 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEF---IVEVLMLSL 97
+ +F L+G+G FGKV R + +G+ A+K L E + E + E +L
Sbjct: 7 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-AVGAAR 156
H L L + D+ V EY G L HL +E + R +
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS 121
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
LEYLH + V+YRD+K N++LD D + K++DFGL K G + D + GT Y
Sbjct: 122 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKX-FCGTPEY 176
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
APE D + GVV+ E++ GR
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEF---IVEVLMLSL 97
+ +F L+G+G FGKV R + +G+ A+K L E + E + E +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-AVGAAR 156
H L L + D+ V EY G L HL +E + R +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS 116
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
LEYLH + V+YRD+K N++LD D + K++DFGL K G + D + GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKX-FCGTPEY 171
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
APE D + GVV+ E++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 101/213 (47%), Gaps = 34/213 (15%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGY--- 109
+G+G +G+V++G L G+ VA+K + Q E+ LL HDN++ I
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE-TEIYNTVLLRHDNILGFIASDMT 73
Query: 110 -CTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLH-----C 163
S Q L+ Y GSL D L ++ L + +++AV AA GL +LH
Sbjct: 74 SRNSSTQLWLITHYHEHGSLYDFL-----QRQTLEPHLALRLAVSAACGLAHLHVEIFGT 128
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGP-------VGDNTHVSTRVMGTYGY 216
+ P + +RD KS N+L+ ++ ++D GLA + +G+N V GT Y
Sbjct: 129 QGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-----GTKRY 183
Query: 217 CAPEYAMSGKLT------LKSDIYSFGVVLLEL 243
APE T +DI++FG+VL E+
Sbjct: 184 MAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 134/326 (41%), Gaps = 55/326 (16%)
Query: 36 TFRELAIATRNFREANLI-----GEGGFGKVYKG-----RLESG-QLVAIKQLNHEGLQG 84
F+ L F NL+ GEG FGKV K + +G VA+K L
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 85 H-QEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE------- 136
++ + E +L ++H +++ L G C+ LL+ EY GSL L +
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 137 -------------PDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN 183
PD+ L+ + A ++G++YL A +++RDL + NIL+
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAE 185
Query: 184 DFNPKLSDFGLAKLGPVGDNTHVSTRVMG--TYGYCAPEYAMSGKLTLKSDIYSFGVVLL 241
K+SDFGL++ V + R G + A E T +SD++SFGV+L
Sbjct: 186 GRKMKISDFGLSR--DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLW 243
Query: 242 ELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM 301
E++T L P + ++ F +L+ P C +
Sbjct: 244 EIVT---------------LGGNPYPGIPPERLF-NLLKTGHRMERPDNCSEEMYRLMLQ 287
Query: 302 CLNEEANFRPLINDIVVALDYLVSQR 327
C +E + RP+ DI L+ ++ +R
Sbjct: 288 CWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 23/202 (11%)
Query: 53 IGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL 106
+G+G FG VY R + + A+K QL G++ + EV + S L H N++ L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE--HQLRREVEIQSHLRHPNILRL 77
Query: 107 IGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGAARGLEYLHCK 164
GY + L+ EY P+G++ L L +Q ++ T + A L Y H K
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL------ANALSYCHSK 131
Query: 165 ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS 224
VI+RD+K N+LL ++ K++DFG + P + GT Y PE
Sbjct: 132 R---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEMIEG 184
Query: 225 GKLTLKSDIYSFGVVLLELITG 246
K D++S GV+ E + G
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 19/226 (8%)
Query: 42 IATRNFREANLIGEGGFGKVY-KGRLESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSL 97
+ +F ++G+G FGKV R + +L AIK L + + + +VE +L+L
Sbjct: 16 VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL 75
Query: 98 LHHDNLVTLIGYCTSGDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAAR 156
L +T + C RL V EY+ G L H+ + +EP + +I++G
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIG--- 132
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR-VMGTYG 215
L +LH + +IYRDLK N++LD++ + K++DFG+ K + V+TR GT
Sbjct: 133 -LFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMM---DGVTTREFCGTPD 185
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNL 261
Y APE D +++GV+L E++ G+ D G+ E L
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD---GEDEDEL 228
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 124
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSXQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 145
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T + T Y APE
Sbjct: 146 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 203
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ +E LY L Q LS + RGL+Y+H
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 146
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T + T Y APE
Sbjct: 147 SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 204
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 124/300 (41%), Gaps = 40/300 (13%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVEVLMLSLL-HHDNLV 104
+G G FGKV + + ++ VA+K L L + + E+ +LS L +H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYD--------------LEPDQEPLSWNTRMKI 150
L+G CT G L++ EY G L + L +E D+ L +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
+ A+G+ +L A+ I+RDL + NILL + K+ DFGLA+ N V
Sbjct: 167 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK 270
+ APE + T +SD++S+G+ L EL + L S P +
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYPGMP 268
Query: 271 DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSH 330
KF ++ P + C + + RP IV ++ +S+ +H
Sbjct: 269 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNH 328
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 46 NFREANLIGEGGFGKVY----KGRLESGQLVAIKQLNHEGLQGHQEF--IVEVLMLSLLH 99
+F ++G+G FGKV+ R +SG L A+K L L+ +E +L+ ++
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGA-ARGL 158
H +V L + + L+ +++ G L L +E + +K + A GL
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYLAELALGL 143
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
++LH +IYRDLK NILLD + + KL+DFGL+K D+ + GT Y A
Sbjct: 144 DHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFCGTVEYMA 198
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE + +D +S+GV++ E++TG
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 124/300 (41%), Gaps = 40/300 (13%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVEVLMLSLL-HHDNLV 104
+G G FGKV + + ++ VA+K L L + + E+ +LS L +H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYD--------------LEPDQEPLSWNTRMKI 150
L+G CT G L++ EY G L + L +E D+ L +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
+ A+G+ +L A+ I+RDL + NILL + K+ DFGLA+ N V
Sbjct: 151 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK 270
+ APE + T +SD++S+G+ L EL + L S P +
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYPGMP 252
Query: 271 DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSH 330
KF ++ P + C + + RP IV ++ +S+ +H
Sbjct: 253 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNH 312
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 16/207 (7%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHHD 101
NF ++G+G FGKV R+ E+G L A+K L + + + + E +LSL +
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 102 NLVTLIGYCTSGDQRLL-VYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-AVGAARGLE 159
+T + C RL V E++ G L H+ E R + A L
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDE-----ARARFYAAEIISALM 138
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
+LH K +IYRDLK N+LLD++ + KL+DFG+ K G N + GT Y AP
Sbjct: 139 FLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC--NGVTTATFCGTPDYIAP 193
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITG 246
E D ++ GV+L E++ G
Sbjct: 194 EILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 124/300 (41%), Gaps = 40/300 (13%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVEVLMLSLL-HHDNLV 104
+G G FGKV + + ++ VA+K L L + + E+ +LS L +H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYD--------------LEPDQEPLSWNTRMKI 150
L+G CT G L++ EY G L + L +E D+ L +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
+ A+G+ +L A+ I+RDL + NILL + K+ DFGLA+ N V
Sbjct: 174 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK 270
+ APE + T +SD++S+G+ L EL + L S P +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYPGMP 275
Query: 271 DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSH 330
KF ++ P + C + + RP IV ++ +S+ +H
Sbjct: 276 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNH 335
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 24/214 (11%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLV 104
+G G FG+V + + + + VA+K L H+ + E+ +++ + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 105 TLIGYCTS-GDQRLLVYEYMPMGSLEDHL---------YDLEPD---QEPLSWNTRMKIA 151
L+G CT G +++ E+ G+L +L Y + P+ ++ L+ + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM 211
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 212 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T++SD++SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 53 IGEGGFGKVYKGRLES-GQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGY 109
IG G +G+ K R +S G+++ K+L++ + Q + EV +L L H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 110 CTSGDQRLL--VYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKAN- 166
L V EY G L + +++ L +++ L+ H +++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 167 -PPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG 225
V++RDLK AN+ LD N KL DFGLA++ + +T + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKTFVGTPYYMSPEQMNRM 191
Query: 226 KLTLKSDIYSFGVVLLEL 243
KSDI+S G +L EL
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 95/211 (45%), Gaps = 14/211 (6%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEF---IVEVLMLSL 97
+ F L+G+G FGKV + + +G+ A+K L E + E + E +L
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-AVGAAR 156
H L L + D+ V EY G L HL +E + R +
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVS 121
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
L+YLH + N V+YRDLK N++LD D + K++DFGL K G + D + GT Y
Sbjct: 122 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKX-FCGTPEY 177
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
APE D + GVV+ E++ GR
Sbjct: 178 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 124
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + ++L+H+N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 125
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 125
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 124/300 (41%), Gaps = 40/300 (13%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVEVLMLSLL-HHDNLV 104
+G G FGKV + + ++ VA+K L L + + E+ +LS L +H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYD--------------LEPDQEPLSWNTRMKI 150
L+G CT G L++ EY G L + L +E D+ L +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
+ A+G+ +L A+ I+RDL + NILL + K+ DFGLA+ N V
Sbjct: 174 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK 270
+ APE + T +SD++S+G+ L EL + L S P +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYPGMP 275
Query: 271 DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSH 330
KF ++ P + C + + RP IV ++ +S+ +H
Sbjct: 276 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNH 335
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 125
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 53 IGEGGFGKVYKGRLES-GQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGY 109
IG G +G+ K R +S G+++ K+L++ + Q + EV +L L H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 110 CTSGDQRLL--VYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKAN- 166
L V EY G L + +++ L +++ L+ H +++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 167 -PPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG 225
V++RDLK AN+ LD N KL DFGLA++ + +T + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKAFVGTPYYMSPEQMNRM 191
Query: 226 KLTLKSDIYSFGVVLLEL 243
KSDI+S G +L EL
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 124
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 95/211 (45%), Gaps = 14/211 (6%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEF---IVEVLMLSL 97
+ F L+G+G FGKV + + +G+ A+K L E + E + E +L
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-AVGAAR 156
H L L + D+ V EY G L HL +E + R +
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVS 120
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
L+YLH + N V+YRDLK N++LD D + K++DFGL K G + D + GT Y
Sbjct: 121 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKX-FCGTPEY 176
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
APE D + GVV+ E++ GR
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 124/303 (40%), Gaps = 38/303 (12%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE------SGQLVAIKQLNHE-GLQGHQEFIVEVLM 94
+ +N +G G FG+VY+G++ S VA+K L Q +F++E L+
Sbjct: 28 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 87
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP-DQEP--LSWNTRMKIA 151
+S L+H N+V IG R ++ E M G L+ L + P +P L+ + +A
Sbjct: 88 ISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 147
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVS 207
A G +YL I+RD+ + N LL P K+ DFG+A+
Sbjct: 148 RDIACGCQYLEENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKG 203
Query: 208 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGE--QNLVSWS 265
M + PE M G T K+D +SFGV+L E+ + SK E + + S
Sbjct: 204 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 263
Query: 266 RPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
R +DP P+ C + C + RP I+ ++Y
Sbjct: 264 R------------MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 305
Query: 326 QRD 328
D
Sbjct: 306 DPD 308
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 95/211 (45%), Gaps = 14/211 (6%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEF---IVEVLMLSL 97
+ F L+G+G FGKV + + +G+ A+K L E + E + E +L
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-AVGAAR 156
H L L + D+ V EY G L HL +E + R +
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVS 119
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
L+YLH + N V+YRDLK N++LD D + K++DFGL K G + D + GT Y
Sbjct: 120 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKX-FCGTPEY 175
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
APE D + GVV+ E++ GR
Sbjct: 176 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 24/214 (11%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLV 104
+G G FG+V + + + + VA+K L H+ + E+ +++ + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 105 TLIGYCTS-GDQRLLVYEYMPMGSLEDHL---------YDLEPD---QEPLSWNTRMKIA 151
L+G CT G +++ E+ G+L +L Y + P+ ++ L+ + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM 211
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 212 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T++SD++SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 124/300 (41%), Gaps = 40/300 (13%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEG-LQGHQEFIVEVLMLSLL-HHDNLV 104
+G G FGKV + + ++ VA+K L L + + E+ +LS L +H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYD--------------LEPDQEPLSWNTRMKI 150
L+G CT G L++ EY G L + L +E D+ L +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
+ A+G+ +L A+ I+RDL + NILL + K+ DFGLA+ N V
Sbjct: 169 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK 270
+ APE + T +SD++S+G+ L EL + L S P +
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---------------LGSSPYPGMP 270
Query: 271 DQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSH 330
KF ++ P + C + + RP IV ++ +S+ +H
Sbjct: 271 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNH 330
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 73 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 123
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 124 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 241
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 124
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 124
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 124/303 (40%), Gaps = 38/303 (12%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE------SGQLVAIKQLNHE-GLQGHQEFIVEVLM 94
+ +N +G G FG+VY+G++ S VA+K L Q +F++E L+
Sbjct: 42 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 101
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP-DQEP--LSWNTRMKIA 151
+S L+H N+V IG R ++ E M G L+ L + P +P L+ + +A
Sbjct: 102 ISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 161
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVS 207
A G +YL I+RD+ + N LL P K+ DFG+A+
Sbjct: 162 RDIACGCQYLEENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKG 217
Query: 208 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGE--QNLVSWS 265
M + PE M G T K+D +SFGV+L E+ + SK E + + S
Sbjct: 218 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 277
Query: 266 RPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
R +DP P+ C + C + RP I+ ++Y
Sbjct: 278 R------------MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 319
Query: 326 QRD 328
D
Sbjct: 320 DPD 322
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 110/274 (40%), Gaps = 31/274 (11%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGL---QGHQEFIVEVLMLSLLHHD 101
NFR IG G F +VY+ L G VA+K++ L + + I E+ +L L+H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
N++ ++ +V E G L + + + + T K V LE++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
H + V++RD+K AN+ + KL D GL + T + ++GT Y +PE
Sbjct: 153 HSRR---VMHRDIKPANVFITATGVVKLGDLGLGRF--FSSKTTAAHSLVGTPYYMSPER 207
Query: 222 AMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDP 281
KSDI+S G +L E + + PF D+ L
Sbjct: 208 IHENGYNFKSDIWSLGCLLYE------------------MAALQSPFYGDKMNLYSLCKK 249
Query: 282 LLHGRYPRRCLNYAV----AVTAMCLNEEANFRP 311
+ YP ++ + MC+N + RP
Sbjct: 250 IEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRP 283
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 124
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 125
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 125
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 125
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 125
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 124
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 124
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 24/214 (11%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLV 104
+G G FG+V + + + + VA+K L H+ + E+ +++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 105 TLIGYCTS-GDQRLLVYEYMPMGSLEDHL---------YDLEPD---QEPLSWNTRMKIA 151
L+G CT G +++ E+ G+L +L Y + P+ ++ L+ + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM 211
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 212 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T++SD++SFGV+L E+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 124
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 124
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 125
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 50 ANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQ---EFIVEVLMLSLLHHDNLVT 105
+ +G G FGKV G + +G VA+K LN + ++ + E+ L L H +++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L ++ +V EY+ G L D++ +E + +I ++Y H
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL----SAVDYCHRHM 131
Query: 166 NPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG 225
V++RDLK N+LLD N K++DFGL+ + G+ S G+ Y APE +SG
Sbjct: 132 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE-VISG 184
Query: 226 KLTL--KSDIYSFGVVLLELITGRKAMD 251
+L + DI+S GV+L L+ G D
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG +G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 124
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 28/210 (13%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IG+G FG+V++G+ G+ VA+K + E +E E+ +L H+N++ I
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 67
Query: 112 SGD----QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLH----- 162
+ Q LV +Y GSL D+L E + +K+A+ A GL +LH
Sbjct: 68 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVG 122
Query: 163 CKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVS-TRVMGTYGYCAPE 220
+ P + +RDLKS NIL+ + ++D GLA + D ++ +GT Y APE
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 221 YAMSGKLTLK-------SDIYSFGVVLLEL 243
+ + +K +DIY+ G+V E+
Sbjct: 183 -VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 10/206 (4%)
Query: 48 REANL--IGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNL 103
R NL IGEG +G V ++ VAIK+++ Q + Q + E+ +L H+N+
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+ + + + Y+ + LY L Q LS + RGL+Y+H
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH-LSNDHICYFLYQILRGLKYIH- 161
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYA 222
AN V++RDLK +N+LL+ + K+ DFGLA++ P D+T T + T Y APE
Sbjct: 162 SAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 223 MSGKLTLKS-DIYSFGVVLLELITGR 247
++ K KS DI+S G +L E+++ R
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 28/210 (13%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IG+G FG+V++G+ G+ VA+K + E +E E+ +L H+N++ I
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 68
Query: 112 SGD----QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLH----- 162
+ Q LV +Y GSL D+L E + +K+A+ A GL +LH
Sbjct: 69 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVG 123
Query: 163 CKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVS-TRVMGTYGYCAPE 220
+ P + +RDLKS NIL+ + ++D GLA + D ++ +GT Y APE
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 183
Query: 221 YAMSGKLTLK-------SDIYSFGVVLLEL 243
+ + +K +DIY+ G+V E+
Sbjct: 184 -VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 40 LAIATRNFREANLIGEGGFGKVYKGR--LESGQLVAIK----QLNHEGLQGHQEFIVEVL 93
L A + + IGEG +GKV+K R G+ VA+K Q EG+ V VL
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 94 M-LSLLHHDNLVTLIGYCTSG-----DQRLLVYEYMPMGSLEDHLYDLEPDQEP-LSWNT 146
L H N+V L CT + LV+E++ +D L+ EP + T
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKVPEPGVPTET 121
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
+ RGL++LH V++RDLK NIL+ + KL+DFGLA++
Sbjct: 122 IKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMA 175
Query: 207 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
T V+ T Y APE + D++S G + E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 123/303 (40%), Gaps = 38/303 (12%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE------SGQLVAIKQLNHE-GLQGHQEFIVEVLM 94
+ +N +G G FG+VY+G++ S VA+K L Q +F++E L+
Sbjct: 19 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 78
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP-DQEP--LSWNTRMKIA 151
+S +H N+V IG R ++ E M G L+ L + P +P L+ + +A
Sbjct: 79 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 138
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVS 207
A G +YL I+RD+ + N LL P K+ DFG+A+
Sbjct: 139 RDIACGCQYLEENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKG 194
Query: 208 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGE--QNLVSWS 265
M + PE M G T K+D +SFGV+L E+ + SK E + + S
Sbjct: 195 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 254
Query: 266 RPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
R +DP P+ C + C + RP I+ ++Y
Sbjct: 255 R------------MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 296
Query: 326 QRD 328
D
Sbjct: 297 DPD 299
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 28/210 (13%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IG+G FG+V++G+ G+ VA+K + E +E E+ +L H+N++ I
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 73
Query: 112 SGD----QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLH----- 162
+ Q LV +Y GSL D+L E + +K+A+ A GL +LH
Sbjct: 74 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVG 128
Query: 163 CKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVS-TRVMGTYGYCAPE 220
+ P + +RDLKS NIL+ + ++D GLA + D ++ +GT Y APE
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 188
Query: 221 YAMSGKLTLK-------SDIYSFGVVLLEL 243
+ + +K +DIY+ G+V E+
Sbjct: 189 -VLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 123/303 (40%), Gaps = 38/303 (12%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE------SGQLVAIKQLNHE-GLQGHQEFIVEVLM 94
+ +N +G G FG+VY+G++ S VA+K L Q +F++E L+
Sbjct: 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 86
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP-DQEP--LSWNTRMKIA 151
+S +H N+V IG R ++ E M G L+ L + P +P L+ + +A
Sbjct: 87 ISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 146
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVS 207
A G +YL I+RD+ + N LL P K+ DFG+A+
Sbjct: 147 RDIACGCQYLEENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKG 202
Query: 208 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGE--QNLVSWS 265
M + PE M G T K+D +SFGV+L E+ + SK E + + S
Sbjct: 203 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 262
Query: 266 RPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
R +DP P+ C + C + RP I+ ++Y
Sbjct: 263 R------------MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304
Query: 326 QRD 328
D
Sbjct: 305 DPD 307
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 52 LIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQG---HQEFIVEVLMLSLLHHDNLVTLI 107
++G GG +V+ R L + VA+K L + + + F E + L+H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 108 ----GYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+G +V EY+ +L D ++ + P++ +++ A + L + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQ 134
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYA 222
+I+RD+K ANIL+ K+ DFG+A+ + G++ + V+GT Y +PE A
Sbjct: 135 NG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQA 191
Query: 223 MSGKLTLKSDIYSFGVVLLELITG 246
+ +SD+YS G VL E++TG
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 40 LAIATRNFREANLIGEGGFGKVYKGR--LESGQLVAIK----QLNHEGLQGHQEFIVEVL 93
L A + + IGEG +GKV+K R G+ VA+K Q EG+ V VL
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 94 M-LSLLHHDNLVTLIGYCTSG-----DQRLLVYEYMPMGSLEDHLYDLEPDQEP-LSWNT 146
L H N+V L CT + LV+E++ +D L+ EP + T
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKVPEPGVPTET 121
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
+ RGL++LH V++RDLK NIL+ + KL+DFGLA++
Sbjct: 122 IKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMA 175
Query: 207 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
T V+ T Y APE + D++S G + E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 123/303 (40%), Gaps = 38/303 (12%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE------SGQLVAIKQLNH-EGLQGHQEFIVEVLM 94
+ +N +G G FG+VY+G++ S VA+K L Q +F++E L+
Sbjct: 42 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALI 101
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP-DQEP--LSWNTRMKIA 151
+S +H N+V IG R ++ E M G L+ L + P +P L+ + +A
Sbjct: 102 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 161
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVS 207
A G +YL I+RD+ + N LL P K+ DFG+A+
Sbjct: 162 RDIACGCQYLEENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKG 217
Query: 208 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGE--QNLVSWS 265
M + PE M G T K+D +SFGV+L E+ + SK E + + S
Sbjct: 218 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 277
Query: 266 RPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
R +DP P+ C + C + RP I+ ++Y
Sbjct: 278 R------------MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 319
Query: 326 QRD 328
D
Sbjct: 320 DPD 322
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTL---- 106
+G GGFG V + ++G+ VAIKQ E + + + +E+ ++ L+H N+V+
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 107 --IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP----DQEPLSWNTRMKIAVGAARGLEY 160
+ D LL EY G L +L E + P+ + + L Y
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSALRY 136
Query: 161 LHCKANPPVIYRDLKSANILLD---NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
LH +I+RDLK NI+L K+ D G AK D + T +GT Y
Sbjct: 137 LH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYL 190
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITG 246
APE K T+ D +SFG + E ITG
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 28/210 (13%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IG+G FG+V++G+ G+ VA+K + E +E E+ +L H+N++ I
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 70
Query: 112 SGD----QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLH----- 162
+ Q LV +Y GSL D+L E + +K+A+ A GL +LH
Sbjct: 71 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVG 125
Query: 163 CKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVS-TRVMGTYGYCAPE 220
+ P + +RDLKS NIL+ + ++D GLA + D ++ +GT Y APE
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 221 YAMSGKLTLK-------SDIYSFGVVLLEL 243
+ + +K +DIY+ G+V E+
Sbjct: 186 -VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 40 LAIATRNFREANLIGEGGFGKVYKGR--LESGQLVAIK----QLNHEGLQGHQEFIVEVL 93
L A + + IGEG +GKV+K R G+ VA+K Q EG+ V VL
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 94 M-LSLLHHDNLVTLIGYCTSG-----DQRLLVYEYMPMGSLEDHLYDLEPDQEP-LSWNT 146
L H N+V L CT + LV+E++ +D L+ EP + T
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKVPEPGVPTET 121
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
+ RGL++LH V++RDLK NIL+ + KL+DFGLA++
Sbjct: 122 IKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMA 175
Query: 207 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
T V+ T Y APE + D++S G + E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVTL---- 106
+G GGFG V + ++G+ VAIKQ E + + + +E+ ++ L+H N+V+
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 107 --IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP----DQEPLSWNTRMKIAVGAARGLEY 160
+ D LL EY G L +L E + P+ + + L Y
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSALRY 137
Query: 161 LHCKANPPVIYRDLKSANILLD---NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
LH +I+RDLK NI+L K+ D G AK D + T +GT Y
Sbjct: 138 LH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYL 191
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITG 246
APE K T+ D +SFG + E ITG
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 123/303 (40%), Gaps = 38/303 (12%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE------SGQLVAIKQLNHE-GLQGHQEFIVEVLM 94
+ +N +G G FG+VY+G++ S VA+K L Q +F++E L+
Sbjct: 28 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 87
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP-DQEP--LSWNTRMKIA 151
+S +H N+V IG R ++ E M G L+ L + P +P L+ + +A
Sbjct: 88 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 147
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVS 207
A G +YL I+RD+ + N LL P K+ DFG+A+
Sbjct: 148 RDIACGCQYLEENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKG 203
Query: 208 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGE--QNLVSWS 265
M + PE M G T K+D +SFGV+L E+ + SK E + + S
Sbjct: 204 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 263
Query: 266 RPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
R +DP P+ C + C + RP I+ ++Y
Sbjct: 264 R------------MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 305
Query: 326 QRD 328
D
Sbjct: 306 DPD 308
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 123/303 (40%), Gaps = 38/303 (12%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE------SGQLVAIKQLNHE-GLQGHQEFIVEVLM 94
+ +N +G G FG+VY+G++ S VA+K L Q +F++E L+
Sbjct: 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 86
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP-DQEP--LSWNTRMKIA 151
+S +H N+V IG R ++ E M G L+ L + P +P L+ + +A
Sbjct: 87 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 146
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVS 207
A G +YL I+RD+ + N LL P K+ DFG+A+
Sbjct: 147 RDIACGCQYLEENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKG 202
Query: 208 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGE--QNLVSWS 265
M + PE M G T K+D +SFGV+L E+ + SK E + + S
Sbjct: 203 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 262
Query: 266 RPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
R +DP P+ C + C + RP I+ ++Y
Sbjct: 263 R------------MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304
Query: 326 QRD 328
D
Sbjct: 305 DPD 307
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 24/214 (11%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLV 104
+G G FG+V + + + + VA+K L H+ + E+ +++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 105 TLIGYCTS-GDQRLLVYEYMPMGSLEDHL---------YDLEPD---QEPLSWNTRMKIA 151
L+G CT G +++ E+ G+L +L Y + P+ ++ L+ + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM 211
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 212 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T++SD++SFGV+L E+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 28/210 (13%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IG+G FG+V++G+ G+ VA+K + E +E E+ +L H+N++ I
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 93
Query: 112 SGD----QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLH----- 162
+ Q LV +Y GSL D+L E + +K+A+ A GL +LH
Sbjct: 94 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVG 148
Query: 163 CKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVS-TRVMGTYGYCAPE 220
+ P + +RDLKS NIL+ + ++D GLA + D ++ +GT Y APE
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 208
Query: 221 YAMSGKLTLK-------SDIYSFGVVLLEL 243
+ + +K +DIY+ G+V E+
Sbjct: 209 -VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 120/292 (41%), Gaps = 38/292 (13%)
Query: 53 IGEGGFGKVYKGRLE------SGQLVAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVT 105
+G G FG+VY+G++ S VA+K L Q +F++E L++S +H N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP-DQEP--LSWNTRMKIAVGAARGLEYLH 162
IG R ++ E M G L+ L + P +P L+ + +A A G +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 163 CKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
I+RD+ + N LL P K+ DFG+A+ M +
Sbjct: 165 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGE--QNLVSWSRPFLKDQKKFV 276
PE M G T K+D +SFGV+L E+ + SK E + + S R
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR---------- 270
Query: 277 HLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRD 328
+DP P+ C + C + RP I+ ++Y D
Sbjct: 271 --MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 314
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 123/303 (40%), Gaps = 38/303 (12%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE------SGQLVAIKQLNHE-GLQGHQEFIVEVLM 94
+ +N +G G FG+VY+G++ S VA+K L Q +F++E L+
Sbjct: 44 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 103
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP-DQEP--LSWNTRMKIA 151
+S +H N+V IG R ++ E M G L+ L + P +P L+ + +A
Sbjct: 104 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 163
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVS 207
A G +YL I+RD+ + N LL P K+ DFG+A+
Sbjct: 164 RDIACGCQYLEENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKG 219
Query: 208 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGE--QNLVSWS 265
M + PE M G T K+D +SFGV+L E+ + SK E + + S
Sbjct: 220 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 279
Query: 266 RPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
R +DP P+ C + C + RP I+ ++Y
Sbjct: 280 R------------MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 321
Query: 326 QRD 328
D
Sbjct: 322 DPD 324
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 120/275 (43%), Gaps = 41/275 (14%)
Query: 53 IGEGGFGK-VYKGRLESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGY 109
IGEG FGK + E G+ IK++N + +E EV +L+ + H N+V
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 110 CTSGDQRLLVYEYMPMGSLEDHLYD----LEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
+V +Y G L + L + + L W ++ +A L+++H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVH--- 142
Query: 166 NPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG 225
+ +++RD+KS NI L D +L DFG+A++ + ++ +GT Y +PE +
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLSPEICENK 200
Query: 226 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHG 285
KSDI++ G VL EL T + A + + +LV ++ G
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKHAFEAGSMK--------------------NLVLKIISG 240
Query: 286 RYPRRCLNYAV---AVTAMCLNEEANFRPLINDIV 317
+P L+Y+ ++ + RP +N I+
Sbjct: 241 SFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSIL 275
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 120/292 (41%), Gaps = 38/292 (13%)
Query: 53 IGEGGFGKVYKGRLE------SGQLVAIKQLNHE-GLQGHQEFIVEVLMLSLLHHDNLVT 105
+G G FG+VY+G++ S VA+K L Q +F++E L++S +H N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP-DQEP--LSWNTRMKIAVGAARGLEYLH 162
IG R ++ E M G L+ L + P +P L+ + +A A G +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 163 CKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
I+RD+ + N LL P K+ DFG+A+ M +
Sbjct: 185 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGE--QNLVSWSRPFLKDQKKFV 276
PE M G T K+D +SFGV+L E+ + SK E + + S R
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR---------- 290
Query: 277 HLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRD 328
+DP P+ C + C + RP I+ ++Y D
Sbjct: 291 --MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 334
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 123/303 (40%), Gaps = 38/303 (12%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE------SGQLVAIKQLNHE-GLQGHQEFIVEVLM 94
+ +N +G G FG+VY+G++ S VA+K L Q +F++E L+
Sbjct: 42 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 101
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP-DQEP--LSWNTRMKIA 151
+S +H N+V IG R ++ E M G L+ L + P +P L+ + +A
Sbjct: 102 ISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 161
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVS 207
A G +YL I+RD+ + N LL P K+ DFG+A+
Sbjct: 162 RDIACGCQYLEENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKG 217
Query: 208 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGE--QNLVSWS 265
M + PE M G T K+D +SFGV+L E+ + SK E + + S
Sbjct: 218 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 277
Query: 266 RPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
R +DP P+ C + C + RP I+ ++Y
Sbjct: 278 R------------MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 319
Query: 326 QRD 328
D
Sbjct: 320 DPD 322
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 26/215 (12%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLV 104
+G G FG+V + + + + VA+K L H+ + E+ +++ + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 105 TLIGYCTS-GDQRLLVYEYMPMGSLEDHL---------YDLEPD---QEPLSWNTRMKIA 151
L+G CT G +++ E+ G+L +L Y + P+ ++ L+ + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVST-RV 210
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ D +V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 201
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T++SD++SFGV+L E+ +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 53 IGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDN--LVTLIGY 109
+G G G+V+K R ++G ++A+KQ+ G + + I+ L + L HD +V G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 110 CTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 169
+ + E M G+ + L Q P+ K+ V + L YL K V
Sbjct: 93 FITNTDVFIAMELM--GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYL--KEKHGV 146
Query: 170 IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT- 228
I+RD+K +NILLD KL DFG++ G + D+ R G Y APE T
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGIS--GRLVDD-KAKDRSAGCAAYMAPERIDPPDPTK 203
Query: 229 ----LKSDIYSFGVVLLELITGR 247
+++D++S G+ L+EL TG+
Sbjct: 204 PDYDIRADVWSLGISLVELATGQ 226
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 26/215 (12%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLV 104
+G G FG+V + + + + VA+K L H+ + E+ +++ + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 105 TLIGYCTS-GDQRLLVYEYMPMGSLEDHL---------YDLEPD---QEPLSWNTRMKIA 151
L+G CT G +++ E+ G+L +L Y + P+ ++ L+ + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVST-RV 210
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ D +V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 201
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T++SD++SFGV+L E+ +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 123/303 (40%), Gaps = 38/303 (12%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE------SGQLVAIKQLNHE-GLQGHQEFIVEVLM 94
+ +N +G G FG+VY+G++ S VA+K L Q +F++E L+
Sbjct: 28 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 87
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP-DQEP--LSWNTRMKIA 151
+S +H N+V IG R ++ E M G L+ L + P +P L+ + +A
Sbjct: 88 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 147
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVS 207
A G +YL I+RD+ + N LL P K+ DFG+A+
Sbjct: 148 RDIACGCQYLEENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMAQDIYRASYYRKG 203
Query: 208 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGE--QNLVSWS 265
M + PE M G T K+D +SFGV+L E+ + SK E + + S
Sbjct: 204 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 263
Query: 266 RPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
R +DP P+ C + C + RP I+ ++Y
Sbjct: 264 R------------MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 305
Query: 326 QRD 328
D
Sbjct: 306 DPD 308
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 28/210 (13%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IG+G FG+V++G+ G+ VA+K + E +E E+ +L H+N++ I
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 106
Query: 112 SGD----QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLH----- 162
+ Q LV +Y GSL D+L E + +K+A+ A GL +LH
Sbjct: 107 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVG 161
Query: 163 CKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVS-TRVMGTYGYCAPE 220
+ P + +RDLKS NIL+ + ++D GLA + D ++ +GT Y APE
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
Query: 221 YAMSGKLTLK-------SDIYSFGVVLLEL 243
+ + +K +DIY+ G+V E+
Sbjct: 222 -VLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 26/215 (12%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLV 104
+G G FG+V + + + + VA+K L H+ + E+ +++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 105 TLIGYCTS-GDQRLLVYEYMPMGSLEDHL---------YDLEPD---QEPLSWNTRMKIA 151
L+G CT G +++ E+ G+L +L Y + P+ ++ L+ + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVST-RV 210
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ D +V
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 210
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T++SD++SFGV+L E+ +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 53 IGEGGFGKVYKGRLES-GQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGY 109
IG G +G+ K R +S G+++ K+L++ + Q + EV +L L H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 110 CTSGDQRLL--VYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKAN- 166
L V EY G L + +++ L +++ L+ H +++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 167 -PPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG 225
V++RDLK AN+ LD N KL DFGLA++ + + + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDEDFAKEFVGTPYYMSPEQMNRM 191
Query: 226 KLTLKSDIYSFGVVLLEL 243
KSDI+S G +L EL
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 123/303 (40%), Gaps = 38/303 (12%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE------SGQLVAIKQLNHE-GLQGHQEFIVEVLM 94
+ +N +G G FG+VY+G++ S VA+K L Q +F++E L+
Sbjct: 45 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 104
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP-DQEP--LSWNTRMKIA 151
+S +H N+V IG R ++ E M G L+ L + P +P L+ + +A
Sbjct: 105 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 164
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVS 207
A G +YL I+RD+ + N LL P K+ DFG+A+
Sbjct: 165 RDIACGCQYLEENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRAGYYRKG 220
Query: 208 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGE--QNLVSWS 265
M + PE M G T K+D +SFGV+L E+ + SK E + + S
Sbjct: 221 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 280
Query: 266 RPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
R +DP P+ C + C + RP I+ ++Y
Sbjct: 281 R------------MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 322
Query: 326 QRD 328
D
Sbjct: 323 DPD 325
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 46 NFREANLIGEGGFGKVYKGRLESG----QLVAIKQLNHEGLQGHQEF--IVEVLMLSLLH 99
F ++G+G FGKV+ + SG QL A+K L L+ +E +L ++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGA-ARGL 158
H +V L + + L+ +++ G L L +E + +K + A L
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYLAELALAL 139
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
++LH +IYRDLK NILLD + + KL+DFGL+K D+ + GT Y A
Sbjct: 140 DHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMA 194
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE T +D +SFGV++ E++TG
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 52 LIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQG---HQEFIVEVLMLSLLHHDNLVTLI 107
++G GG +V+ R L + VA+K L + + + F E + L+H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 108 ----GYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+G +V EY+ +L D ++ + P++ +++ A + L + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQ 134
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYA 222
+I+RD+K ANI++ K+ DFG+A+ + G++ + V+GT Y +PE A
Sbjct: 135 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 223 MSGKLTLKSDIYSFGVVLLELITG 246
+ +SD+YS G VL E++TG
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 123/303 (40%), Gaps = 38/303 (12%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE------SGQLVAIKQLNHE-GLQGHQEFIVEVLM 94
+ +N +G G FG+VY+G++ S VA+K L Q +F++E L+
Sbjct: 68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 127
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEP-DQEP--LSWNTRMKIA 151
+S +H N+V IG R ++ E M G L+ L + P +P L+ + +A
Sbjct: 128 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 187
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVS 207
A G +YL I+RD+ + N LL P K+ DFG+A+
Sbjct: 188 RDIACGCQYLEENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRAGYYRKG 243
Query: 208 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGE--QNLVSWS 265
M + PE M G T K+D +SFGV+L E+ + SK E + + S
Sbjct: 244 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 303
Query: 266 RPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVS 325
R +DP P+ C + C + RP I+ ++Y
Sbjct: 304 R------------MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345
Query: 326 QRD 328
D
Sbjct: 346 DPD 348
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 52 LIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQG---HQEFIVEVLMLSLLHHDNLVTLI 107
++G GG +V+ R L + VA+K L + + + F E + L+H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 108 ----GYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+G +V EY+ +L D ++ + P++ +++ A + L + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQ 134
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYA 222
+I+RD+K ANI++ K+ DFG+A+ + G++ + V+GT Y +PE A
Sbjct: 135 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 223 MSGKLTLKSDIYSFGVVLLELITG 246
+ +SD+YS G VL E++TG
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 26/215 (12%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLV 104
+G G FG+V + + + + VA+K L H+ + E+ +++ + HH N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 105 TLIGYCTS-GDQRLLVYEYMPMGSLEDHL---------YDLEPD---QEPLSWNTRMKIA 151
L+G CT G +++ E+ G+L +L Y + P+ ++ L+ + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVST-RV 210
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ D +V
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 247
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T++SD++SFGV+L E+ +
Sbjct: 248 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 23/213 (10%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLV 104
+G G FG+V + + + + VA+K L H+ + E+ +++ + HH N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 105 TLIGYCTS-GDQRLLVYEYMPMGSLEDHLY----DLEPDQEP-------LSWNTRMKIAV 152
L+G CT G +++ E+ G+L +L + P + P L+ + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG 212
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 213 TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T++SD++SFGV+L E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 21/229 (9%)
Query: 42 IATRNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLN----HEGLQGHQEFIVEVLM-L 95
+AT + IG G +G VYK R SG VA+K + EGL V +L L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 96 SLLHHDNLVTLIGYCTSG--DQRL---LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 150
H N+V L+ C + D+ + LV+E++ L +L P P T +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA--ETIKDL 117
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
RGL++LH +++RDLK NIL+ + KL+DFGLA+ + V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALAPV 171
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQ 259
+ T Y APE + D++S G + E+ RK + + +Q
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 219
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 11/170 (6%)
Query: 35 FTFRELAIATRNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEV- 92
F + + + R ++ EGGF VY+ + + SG+ A+K+L + ++ I EV
Sbjct: 18 FVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVC 77
Query: 93 LMLSLLHHDNLVTLIGYCT-------SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWN 145
M L H N+V + +G L+ + G L + L +E + PLS +
Sbjct: 78 FMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKME-SRGPLSCD 136
Query: 146 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLA 195
T +KI R ++++H + PP+I+RDLK N+LL N KL DFG A
Sbjct: 137 TVLKIFYQTCRAVQHMH-RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 50 ANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQ---EFIVEVLMLSLLHHDNLVT 105
+ +G G FGKV G + +G VA+K LN + ++ + E+ L L H +++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L ++ +V EY+ G L D++ +E + +I ++Y H
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL----SAVDYCHRHM 131
Query: 166 NPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG 225
V++RDLK N+LLD N K++DFGL+ + G+ S G+ Y APE +SG
Sbjct: 132 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE-VISG 184
Query: 226 KLTL--KSDIYSFGVVLLELITGRKAMD 251
+L + DI+S GV+L L+ G D
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 17/211 (8%)
Query: 53 IGEGGFGKVYKG--RLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIG 108
+G G FG V +G R+ Q+ VAIK L + +E + E ++ L + +V LIG
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 109 YCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 168
C + + +LV E G L L +E + + ++ + G++YL K
Sbjct: 78 VCQA-EALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEKN--- 130
Query: 169 VIYRDLKSANILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTY--GYCAPEYAMSG 225
++RDL + N+LL N K+SDFGL+K LG D+++ + R G + + APE
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALG--ADDSYYTARSAGKWPLKWYAPECINFR 188
Query: 226 KLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 255
K + +SD++S+GV + E ++ G+K KG
Sbjct: 189 KFSSRSDVWSYGVTMWEALSYGQKPYKKMKG 219
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 19/240 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG G+V + + VA+K ++ + + E+ + +L+H+N+V G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPD---QEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G+ + L EY G L D + EPD EP + ++ G YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLHGIG-- 124
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+ +RD+K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 228 TLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW--SRPFLKDQKKFVHLVDPLLH 284
+ D++S G+VL ++ G D Q W + +L KK LLH
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 92/198 (46%), Gaps = 13/198 (6%)
Query: 53 IGEGGFGKV-YKGRLESGQLVAIKQLNHEGLQGHQEFI-VEVLMLSLLHHDNLVTLIGYC 110
IG GGF KV + +G++VAIK ++ L I E+ L L H ++ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
+ ++ +V EY P G L D++ Q+ LS + + Y+H +
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIIS----QDRLSEEETRVVFRQIVSAVAYVHSQG---YA 130
Query: 171 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK 230
+RDLK N+L D KL DFGL P G+ + G+ Y APE + GK L
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPE-LIQGKSYLG 188
Query: 231 S--DIYSFGVVLLELITG 246
S D++S G++L L+ G
Sbjct: 189 SEADVWSMGILLYVLMCG 206
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 46 NFREANLIGEGGFGKVYKGRLESG----QLVAIKQLNHEGLQGHQEF--IVEVLMLSLLH 99
F ++G+G FGKV+ + SG QL A+K L L+ +E +L ++
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGA-ARGL 158
H +V L + + L+ +++ G L L +E + +K + A L
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYLAELALAL 140
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
++LH +IYRDLK NILLD + + KL+DFGL+K D+ + GT Y A
Sbjct: 141 DHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMA 195
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE T +D +SFGV++ E++TG
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 46 NFREANLIGEGGFGKVYKGRLESG----QLVAIKQLNHEGLQGHQEF--IVEVLMLSLLH 99
F ++G+G FGKV+ + SG QL A+K L L+ +E +L ++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGA-ARGL 158
H +V L + + L+ +++ G L L +E + +K + A L
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYLAELALAL 139
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
++LH +IYRDLK NILLD + + KL+DFGL+K D+ + GT Y A
Sbjct: 140 DHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMA 194
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE T +D +SFGV++ E++TG
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 30/211 (14%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQL-NHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IG+G +G+V+ G+ G+ VA+K E +E E+ L+ H+N++ I
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENILGFIAADI 101
Query: 112 SGD----QRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC---- 163
G Q L+ +Y GSL D+L D + + +K+A + GL +LH
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM-----LKLAYSSVSGLCHLHTEIFS 156
Query: 164 -KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV----STRVMGTYGYCA 218
+ P + +RDLKS NIL+ + ++D GLA + + D V +TRV GT Y
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VKFISDTNEVDIPPNTRV-GTKRYMP 214
Query: 219 PEYAMSG------KLTLKSDIYSFGVVLLEL 243
PE + + +D+YSFG++L E+
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 22/212 (10%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLV 104
+G G FG+V + + + + VA+K L H+ + E+ +++ + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 105 TLIGYCTS-GDQRLLVYEYMPMGSLEDHLYDLEPDQEP----------LSWNTRMKIAVG 153
L+G CT G +++ E+ G+L +L + P L+ + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 154 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ +
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T++SD++SFGV+L E+ +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 33/219 (15%)
Query: 43 ATRNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIV------EVLML 95
+ + L+GEG +G V K R ++G++VAIK+ L+ + +V E+ +L
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKF----LESDDDKMVKKIAMREIKLL 78
Query: 96 SLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH--LYDLEPDQEPLSWNTRMKIAVG 153
L H+NLV L+ C + LV+E++ DH L DLE L + K
Sbjct: 79 KQLRHENLVNLLEVCKKKKRWYLVFEFV------DHTILDDLELFPNGLDYQVVQKYLFQ 132
Query: 154 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL----GPVGDNTHVSTR 209
G+ + H +I+RD+K NIL+ KL DFG A+ G V D+ V+TR
Sbjct: 133 IINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD-EVATR 188
Query: 210 VMGTYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
Y APE + K D+++ G ++ E+ G
Sbjct: 189 -----WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 21/229 (9%)
Query: 42 IATRNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLN----HEGLQGHQEFIVEVLM-L 95
+AT + IG G +G VYK R SG VA+K + EGL V +L L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 96 SLLHHDNLVTLIGYCTSG--DQRL---LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 150
H N+V L+ C + D+ + LV+E++ L +L P P T +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA--ETIKDL 117
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
RGL++LH +++RDLK NIL+ + KL+DFGLA+ + V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALDPV 171
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQ 259
+ T Y APE + D++S G + E+ RK + + +Q
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 219
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 44 TRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLN----HEGLQG-HQEFIVEVLMLSL 97
+ + + + +GEG F VYK R + + Q+VAIK++ E G ++ + E+ +L
Sbjct: 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE 68
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
L H N++ L+ LV+++M LE + D P M + + +G
Sbjct: 69 LSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTL---QG 124
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
LEYLH +++RDLK N+LLD + KL+DFGLAK G + T Y
Sbjct: 125 LEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK--SFGSPNRAYXHQVVTRWYR 179
Query: 218 APEYAMSGKL-TLKSDIYSFGVVLLELI 244
APE ++ + D+++ G +L EL+
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 20/206 (9%)
Query: 52 LIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQG---HQEFIVEVLMLSLLHHDNLVTLI 107
++G GG +V+ R L + VA+K L + + + F E + L+H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV- 77
Query: 108 GYCT------SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
Y T +G +V EY+ +L D ++ + P++ +++ A + L +
Sbjct: 78 -YATGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFS 132
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPE 220
H +I+RD+K ANI++ K+ DFG+A+ + G++ + V+GT Y +PE
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 221 YAMSGKLTLKSDIYSFGVVLLELITG 246
A + +SD+YS G VL E++TG
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 22/230 (9%)
Query: 41 AIATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEF-IVEVLMLSLL 98
++ ++F +IG G + KV RL+ + ++ A+K + E + ++ V+
Sbjct: 1 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 60
Query: 99 HHDNLVTLIGY--CTSGDQRLL-VYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVG 153
N L+G C + RL V EY+ G L H+ P++ ++ + +A
Sbjct: 61 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA-- 118
Query: 154 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMG 212
L YLH + +IYRDLK N+LLD++ + KL+D+G+ K G GD T + G
Sbjct: 119 ----LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCG 168
Query: 213 TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDL--SKGQGEQN 260
T Y APE D ++ GV++ E++ GR D+ S +QN
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN 218
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 101/234 (43%), Gaps = 52/234 (22%)
Query: 46 NFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
+F+E LIG GGFG+V+K + G+ I+++ + + +E V L+ L H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIV 68
Query: 105 TLIGYCTSGDQRLLVYEYMPM---GSLEDHLYDLEPDQEPLSWNTR-------------- 147
G C G ++Y P SLE YD E + T+
Sbjct: 69 HYNG-CWDG------FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTL 121
Query: 148 -----------------MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS 190
+++ +G++Y+H K +I+RDLK +NI L + K+
Sbjct: 122 EQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LIHRDLKPSNIFLVDTKQVKIG 178
Query: 191 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
DFGL N TR GT Y +PE S + D+Y+ G++L EL+
Sbjct: 179 DFGLV---TSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 21/229 (9%)
Query: 42 IATRNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLN----HEGLQGHQEFIVEVLM-L 95
+AT + IG G +G VYK R SG VA+K + EGL V +L L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 96 SLLHHDNLVTLIGYCTSG--DQRL---LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 150
H N+V L+ C + D+ + LV+E++ L +L P P T +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA--ETIKDL 117
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
RGL++LH +++RDLK NIL+ + KL+DFGLA+ + V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALFPV 171
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQ 259
+ T Y APE + D++S G + E+ RK + + +Q
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 219
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 39/278 (14%)
Query: 52 LIGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
++G+G +G VY GR S Q+ +AIK++ + Q E+ + L H N+V +G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYD----LEPDQEPLSWNTRMKIAVGAARGLEYLHCKAN 166
+ + E +P GSL L L+ +++ + + T+ + GL+YLH +
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLH---D 126
Query: 167 PPVIYRDLKSANILLDNDFNP--KLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAM 223
+++RD+K N+L+ N ++ K+SDFG +K L + T T GT Y APE
Sbjct: 127 NQIVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIID 182
Query: 224 SGKLTL--KSDIYSFGVVLLELITGRKAM-DLSKGQGEQNLVSWSRPFLKDQKKFVHLVD 280
G +DI+S G ++E+ TG+ +L + Q V +
Sbjct: 183 KGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK-------------- 228
Query: 281 PLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVV 318
+H P A A C + + R ND++V
Sbjct: 229 --VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 264
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 41 AIATRNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQ-----EFIVEVLM 94
++AT + IG G +G VYK R SG VA+K + G + EV +
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 95 LSLLH---HDNLVTLIGYCTSG--DQRL---LVYEYMPMGSLEDHLYDLEPDQEPLSWNT 146
L L H N+V L+ C + D+ + LV+E++ L +L P P T
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA--ET 121
Query: 147 RMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV 206
+ RGL++LH +++RDLK NIL+ + KL+DFGLA+ +
Sbjct: 122 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMA 175
Query: 207 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQ 259
T V+ T Y APE + D++S G + E+ RK + + +Q
Sbjct: 176 LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 227
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLV 104
+G G FG+V + + + + VA+K L H+ + E+ +++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 105 TLIGYCTS-GDQRLLVYEYMPMGSLEDHLYDLEPDQEP--------LSWNTRMKIAVGAA 155
L+G CT G +++ E+ G+L +L + P L+ + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVST-RVMGTY 214
+G+E+L A+ I+RDL + NILL K+ DFGLA+ D +V
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR-DIYKDPDYVRKGDARLPL 210
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T++SD++SFGV+L E+ +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 12/204 (5%)
Query: 46 NFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNL 103
+F + +G G G V K + L+ ++L H ++ + I E+ +L + +
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 76
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
V G S + + E+M GSL+ L + + E + K+++ RGL YL
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG----KVSIAVLRGLAYLRE 132
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM 223
K +++RD+K +NIL+++ KL DFG++ G + D+ ++ +GT Y APE
Sbjct: 133 KHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMAPERLQ 186
Query: 224 SGKLTLKSDIYSFGVVLLELITGR 247
+++SDI+S G+ L+EL GR
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 22/230 (9%)
Query: 41 AIATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEF-IVEVLMLSLL 98
++ ++F +IG G + KV RL+ + ++ A+K + E + ++ V+
Sbjct: 16 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 75
Query: 99 HHDNLVTLIGY--CTSGDQRLL-VYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVG 153
N L+G C + RL V EY+ G L H+ P++ ++ + +A
Sbjct: 76 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA-- 133
Query: 154 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMG 212
L YLH + +IYRDLK N+LLD++ + KL+D+G+ K G GD T + G
Sbjct: 134 ----LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCG 183
Query: 213 TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDL--SKGQGEQN 260
T Y APE D ++ GV++ E++ GR D+ S +QN
Sbjct: 184 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN 233
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQL----NHEGLQGHQEFIVEVLMLSLLHHDNLVTLIG 108
IGEG +G VYK + G+ A+K++ EG+ I E+ +L L H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 109 YCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 168
+ + +LV+E++ +D L+ + L T + G+ Y H +
Sbjct: 68 VIHTKKRLVLVFEHLD----QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR--- 120
Query: 169 VIYRDLKSANILLDNDFNPKLSDFGLAKLG--PVGDNTHVSTRVMGTYGYCAPEYAM-SG 225
V++RDLK N+L++ + K++DFGLA+ PV TH T Y AP+ M S
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGSK 176
Query: 226 KLTLKSDIYSFGVVLLELITG 246
K + DI+S G + E++ G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 39/278 (14%)
Query: 52 LIGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
++G+G +G VY GR S Q+ +AIK++ + Q E+ + L H N+V +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYD----LEPDQEPLSWNTRMKIAVGAARGLEYLHCKAN 166
+ + E +P GSL L L+ +++ + + T+ + GL+YLH +
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLH---D 140
Query: 167 PPVIYRDLKSANILLDNDFNP--KLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAM 223
+++RD+K N+L+ N ++ K+SDFG +K L + T T GT Y APE
Sbjct: 141 NQIVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIID 196
Query: 224 SGKLTL--KSDIYSFGVVLLELITGRKAM-DLSKGQGEQNLVSWSRPFLKDQKKFVHLVD 280
G +DI+S G ++E+ TG+ +L + Q V +
Sbjct: 197 KGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK-------------- 242
Query: 281 PLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVV 318
+H P A A C + + R ND++V
Sbjct: 243 --VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 278
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 20/201 (9%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQL----NHEGLQGHQEFIVEVLMLSLLHHDNLVTLIG 108
IGEG +G VYK + G+ A+K++ EG+ I E+ +L L H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 109 YCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 168
+ + +LV+E++ +D L+ + L T + G+ Y H +
Sbjct: 68 VIHTKKRLVLVFEHLD----QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR--- 120
Query: 169 VIYRDLKSANILLDNDFNPKLSDFGLAK-LG-PVGDNTHVSTRVMGTYGYCAPEYAM-SG 225
V++RDLK N+L++ + K++DFGLA+ G PV TH + T Y AP+ M S
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH----EIVTLWYRAPDVLMGSK 176
Query: 226 KLTLKSDIYSFGVVLLELITG 246
K + DI+S G + E++ G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 12/198 (6%)
Query: 53 IGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQ-EFIVEVLMLSLLHHDNLVTLIGYC 110
+GEG + VYKG+ + + LVA+K++ E +G I EV +L L H N+VTL
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
+ LV+EY+ L+ +L D ++ + RGL Y H + V+
Sbjct: 70 HTEKSLTLVFEYLD-KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQK---VL 122
Query: 171 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM-SGKLTL 229
+RDLK N+L++ KL+DFGLA+ + T+ + V T Y P+ + S +
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTDYST 180
Query: 230 KSDIYSFGVVLLELITGR 247
+ D++ G + E+ TGR
Sbjct: 181 QIDMWGVGCIFYEMATGR 198
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQL----NHEGLQGHQEFIVEVLMLSLLHHDNLVTLIG 108
IGEG +G VYK + G+ A+K++ EG+ I E+ +L L H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 109 YCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 168
+ + +LV+E++ +D L+ + L T + G+ Y H +
Sbjct: 68 VIHTKKRLVLVFEHLD----QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR--- 120
Query: 169 VIYRDLKSANILLDNDFNPKLSDFGLAKLG--PVGDNTHVSTRVMGTYGYCAPEYAM-SG 225
V++RDLK N+L++ + K++DFGLA+ PV TH T Y AP+ M S
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGSK 176
Query: 226 KLTLKSDIYSFGVVLLELITG 246
K + DI+S G + E++ G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 52 LIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQG---HQEFIVEVLMLSLLHHDNLVTLI 107
++G GG +V+ R L + VA+K L + + + F E + L+H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 108 ----GYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+G +V EY+ +L D ++ + P++ +++ A + L + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQ 134
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYA 222
+I+RD+K ANI++ K+ DFG+A+ + G++ + V+GT Y +PE A
Sbjct: 135 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 223 MSGKLTLKSDIYSFGVVLLELITG 246
+ +SD+YS G VL E++TG
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 25/244 (10%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRL----ESGQLVAIKQLNHEGL----QGHQEFIVEVL 93
+ NF ++G G +GKV+ R ++G+L A+K L + + + E
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 94 MLSLLHHDNLVTLIGYCTSGDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 152
+L + + + Y + +L L+ +Y+ G L HL E E ++I V
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE-----HEVQIYV 165
Query: 153 GA-ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM 211
G LE+LH +IYRD+K NILLD++ + L+DFGL+K V D T +
Sbjct: 166 GEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK-EFVADETERAYDFC 221
Query: 212 GTYGYCAPEYAMSGKLTLKS--DIYSFGVVLLELITGRKAMDLSKGQGEQN-LVSWSRPF 268
GT Y AP+ G D +S GV++ EL+TG + GE+N SR
Sbjct: 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD---GEKNSQAEISRRI 278
Query: 269 LKDQ 272
LK +
Sbjct: 279 LKSE 282
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLV 104
+G G FG+V + + + + VA+K L H+ + E+ +++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 105 TLIGYCTS-GDQRLLVYEYMPMGSLEDHLYDLEPDQEP--------LSWNTRMKIAVGAA 155
L+G CT G +++ E+ G+L +L + P L+ + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVST-RVMGTY 214
+G+E+L A+ I+RDL + NILL K+ DFGLA+ D +V
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPL 210
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T++SD++SFGV+L E+ +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 22/229 (9%)
Query: 42 IATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEF-IVEVLMLSLLH 99
+ ++F +IG G + KV RL+ + ++ A+K + E + ++ V+
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 100 HDNLVTLIGY--CTSGDQRLL-VYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGA 154
N L+G C + RL V EY+ G L H+ P++ ++ + +A
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--- 122
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMGT 213
L YLH + +IYRDLK N+LLD++ + KL+D+G+ K G GD T + GT
Sbjct: 123 ---LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGT 173
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDL--SKGQGEQN 260
Y APE D ++ GV++ E++ GR D+ S +QN
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN 222
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 19/216 (8%)
Query: 52 LIGEGGFGKVY-KGRLESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHHDNLVTLI 107
++G+G FGKV R + +L A+K L + + + +VE +L+L +T +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 108 GYCTSGDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKAN 166
C RL V EY+ G L H+ + +EP + +IA+G L +L K
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG----LFFLQSKG- 141
Query: 167 PPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM-GTYGYCAPEYAMSG 225
+IYRDLK N++LD++ + K++DFG+ K + D V+T+ GT Y APE
Sbjct: 142 --IIYRDLKLDNVMLDSEGHIKIADFGMCKEN-IWDG--VTTKXFCGTPDYIAPEIIAYQ 196
Query: 226 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNL 261
D ++FGV+L E++ G+ + G+ E L
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQAPFE---GEDEDEL 229
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 26/215 (12%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLV 104
+G G FG+V + + + + VA+K L H+ + E+ +++ + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 105 TLIGYCTS-GDQRLLVYEYMPMGSLEDHL---------YDLEPD---QEPLSWNTRMKIA 151
L+G CT G +++ E+ G+L +L Y P+ ++ L+ + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVST-RV 210
A+G+E+L A+ I+RDL + NILL K+ DFGLA+ D +V
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 212
Query: 211 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ APE T++SD++SFGV+L E+ +
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 19/216 (8%)
Query: 52 LIGEGGFGKVY-KGRLESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHHDNLVTLI 107
++G+G FGKV R + +L A+K L + + + +VE +L+L +T +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 108 GYCTSGDQRL-LVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKAN 166
C RL V EY+ G L H+ + +EP + +IA+G L +L K
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG----LFFLQSKG- 462
Query: 167 PPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM-GTYGYCAPEYAMSG 225
+IYRDLK N++LD++ + K++DFG+ K + D V+T+ GT Y APE
Sbjct: 463 --IIYRDLKLDNVMLDSEGHIKIADFGMCKEN-IWDG--VTTKXFCGTPDYIAPEIIAYQ 517
Query: 226 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNL 261
D ++FGV+L E++ G+ + G+ E L
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPFE---GEDEDEL 550
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 52 LIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQG---HQEFIVEVLMLSLLHHDNLVTLI 107
++G GG +V+ R L + VA+K L + + + F E + L+H +V +
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 95
Query: 108 ----GYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
+G +V EY+ +L D ++ + P++ +++ A + L + H
Sbjct: 96 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQ 151
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYA 222
+I+RD+K ANI++ K+ DFG+A+ + G++ + V+GT Y +PE A
Sbjct: 152 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 208
Query: 223 MSGKLTLKSDIYSFGVVLLELITG 246
+ +SD+YS G VL E++TG
Sbjct: 209 RGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 13/207 (6%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHH 100
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 101 DNLVTLIGYCTSGDQRLLV-YEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
V L +C D++L Y G L ++ + E TR A LE
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALE 151
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
YLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y +P
Sbjct: 152 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITG 246
E SD+++ G ++ +L+ G
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 17/211 (8%)
Query: 53 IGEGGFGKVYKG--RLESGQL-VAIKQLNHEGLQGH-QEFIVEVLMLSLLHHDNLVTLIG 108
+G G FG V +G R+ Q+ VAIK L + +E + E ++ L + +V LIG
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 109 YCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 168
C + + +LV E G L L +E + + ++ + G++YL K
Sbjct: 404 VCQA-EALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEKN--- 456
Query: 169 VIYRDLKSANILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTY--GYCAPEYAMSG 225
++R+L + N+LL N K+SDFGL+K LG D+++ + R G + + APE
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALG--ADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 226 KLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 255
K + +SD++S+GV + E ++ G+K KG
Sbjct: 515 KFSSRSDVWSYGVTMWEALSYGQKPYKKMKG 545
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 48/233 (20%)
Query: 46 NFREANLIGEGGFGKVYKGR--LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD-- 101
+F E ++G+G FG+V K R L+S + AIK++ H + + EV++L+ L+H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDS-RYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYV 64
Query: 102 -----------NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 150
N V + + EY G+L D ++ +Q+ + ++
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY---WRL 121
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS--- 207
L Y+H + +I+RDLK NI +D N K+ DFGLAK N H S
Sbjct: 122 FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK------NVHRSLDI 172
Query: 208 ---------------TRVMGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELI 244
T +GT Y A E +G K D+YS G++ E+I
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 22/230 (9%)
Query: 41 AIATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEF-IVEVLMLSLL 98
++ ++F +IG G + KV RL+ + ++ A++ + E + ++ V+
Sbjct: 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFE 107
Query: 99 HHDNLVTLIGY--CTSGDQRLL-VYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVG 153
N L+G C + RL V EY+ G L H+ P++ ++ + +A
Sbjct: 108 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA-- 165
Query: 154 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG-PVGDNTHVSTRVMG 212
L YLH + +IYRDLK N+LLD++ + KL+D+G+ K G GD T + G
Sbjct: 166 ----LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCG 215
Query: 213 TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDL--SKGQGEQN 260
T Y APE D ++ GV++ E++ GR D+ S +QN
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN 265
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 97/217 (44%), Gaps = 31/217 (14%)
Query: 46 NFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
+F+E LIG GGFG+V+K + G+ IK++ + + + EV L+ L H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIV 67
Query: 105 TLIGYCTSG-----------DQR------LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTR 147
G C G R + E+ G+LE + E L
Sbjct: 68 HYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--EKLDKVLA 124
Query: 148 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 207
+++ +G++Y+H K +I RDLK +NI L + K+ DFGL N
Sbjct: 125 LELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLV---TSLKNDGKR 178
Query: 208 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
R GT Y +PE S + D+Y+ G++L EL+
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 17/208 (8%)
Query: 47 FREANLIGEGGFGKVYKGR----LESGQLVAIKQLNH----EGLQGHQEFIVEVLMLSLL 98
F ++G+GG+GKV++ R +G++ A+K L + E +L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H +V LI +G + L+ EY+ G L LE + + +T + L
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFME-DTACFYLAEISMAL 134
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
+LH K +IYRDLK NI+L++ + KL+DFGL K + D T V+ GT Y A
Sbjct: 135 GHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKES-IHDGT-VTHXFCGTIEYMA 189
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE M D +S G ++ +++TG
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 36/270 (13%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G V K R + SGQ++A+K++ Q+ ++ L +S+ D T+ Y
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 112 ---SGDQRLLVYEYMP-MGSLEDHLYDLEPDQ-EPLSWNTRMKIAVGAARGLEYLHCKAN 166
GD V+ M M + D Y D+ + + + KIAV + LE+LH K +
Sbjct: 119 LFREGD----VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 174
Query: 167 PPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY---AM 223
VI+RD+K +N+L++ K+ DFG++ G + D+ T G Y APE +
Sbjct: 175 --VIHRDVKPSNVLINALGQVKMCDFGIS--GYLVDSV-AKTIDAGCKPYMAPERINPEL 229
Query: 224 SGK-LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPL 282
+ K ++KSDI+S G+ ++EL R D SW PF + K+ V P
Sbjct: 230 NQKGYSVKSDIWSLGITMIELAILRFPYD-----------SWGTPF-QQLKQVVEEPSPQ 277
Query: 283 LHG-RYPRRCLNYAVAVTAMCLNEEANFRP 311
L ++ +++ T+ CL + + RP
Sbjct: 278 LPADKFSAEFVDF----TSQCLKKNSKERP 303
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 17/208 (8%)
Query: 47 FREANLIGEGGFGKVYKGR----LESGQLVAIKQLNH----EGLQGHQEFIVEVLMLSLL 98
F ++G+GG+GKV++ R +G++ A+K L + E +L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
H +V LI +G + L+ EY+ G L LE + + +T + L
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFME-DTACFYLAEISMAL 134
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
+LH K +IYRDLK NI+L++ + KL+DFGL K + D T V+ GT Y A
Sbjct: 135 GHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKES-IHDGT-VTHTFCGTIEYMA 189
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE M D +S G ++ +++TG
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 52 LIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEFIV--EVLMLSLLHHDNLVTLIG 108
++G+G FG+V K + + Q A+K +N + + EV +L L H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 109 YCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 168
+V E G L D + ++ S + +I G+ Y+H K N
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMH-KHN-- 141
Query: 169 VIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG 225
+++RDLK NILL++ D + K+ DFGL+ NT + R+ GT Y APE + G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKMKDRI-GTAYYIAPE-VLRG 197
Query: 226 KLTLKSDIYSFGVVLLELITG 246
K D++S GV+L L++G
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 52 LIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEFIV--EVLMLSLLHHDNLVTLIG 108
++G+G FG+V K + + Q A+K +N + + EV +L L H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 109 YCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 168
+V E G L D + ++ S + +I G+ Y+H K N
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMH-KHN-- 141
Query: 169 VIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG 225
+++RDLK NILL++ D + K+ DFGL+ NT + R+ GT Y APE + G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKMKDRI-GTAYYIAPE-VLRG 197
Query: 226 KLTLKSDIYSFGVVLLELITG 246
K D++S GV+L L++G
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 40/224 (17%)
Query: 45 RNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLS--LLHHDN 102
R+ +G+G +G+V++G + G+ VA+K + + + + E + + +L H+N
Sbjct: 8 RDITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSS---RDEKSWFRETELYNTVMLRHEN 63
Query: 103 LVTLIGYCT----SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
++ I S Q L+ Y MGSL D+L D ++I + A GL
Sbjct: 64 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGL 118
Query: 159 EYLH-----CKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGP-------VGDNTHV 206
+LH + P + +RDLKS NIL+ + ++D GLA + VG+N V
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 178
Query: 207 STRVMGTYGYCAPEYAMSGKLTL-------KSDIYSFGVVLLEL 243
GT Y APE + + + + DI++FG+VL E+
Sbjct: 179 -----GTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 52 LIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEFIV--EVLMLSLLHHDNLVTLIG 108
++G+G FG+V K + + Q A+K +N + + EV +L L H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 109 YCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 168
+V E G L D + ++ S + +I G+ Y+H K N
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMH-KHN-- 141
Query: 169 VIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG 225
+++RDLK NILL++ D + K+ DFGL+ NT + R+ GT Y APE + G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKMKDRI-GTAYYIAPE-VLRG 197
Query: 226 KLTLKSDIYSFGVVLLELITG 246
K D++S GV+L L++G
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 40/216 (18%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLS--LLHHDNLVTLIGYC 110
+G+G +G+V++G + G+ VA+K + + + + E + + +L H+N++ I
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 111 T----SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLH---- 162
S Q L+ Y MGSL D+L D ++I + A GL +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEIF 126
Query: 163 -CKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGP-------VGDNTHVSTRVMGTY 214
+ P + +RDLKS NIL+ + ++D GLA + VG+N V GT
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-----GTK 181
Query: 215 GYCAPEYAMSGKLTL-------KSDIYSFGVVLLEL 243
Y APE + + + + DI++FG+VL E+
Sbjct: 182 RYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 16/212 (7%)
Query: 40 LAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSL 97
+ + +F + + +G G G V+K + LV ++L H ++ + I E+ +L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGAA 155
+ +V G S + + E+M GSL+ L P+Q K+++
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVI 114
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 215
+GL YL K +++RD+K +NIL+++ KL DFG++ G + D+ ++ +GT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 168
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
Y +PE +++SDI+S G+ L+E+ GR
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHH 100
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 101 DNLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
V L Y T D L + Y G L ++ + E TR A L
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETC---TRFYTA-EIVSAL 145
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYC 217
EYLH K +I+RDLK NILL+ D + +++DFG AK L P ++ V GT Y
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYV 201
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITG 246
+PE + SD+++ G ++ +L+ G
Sbjct: 202 SPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 25/210 (11%)
Query: 46 NFREANLIGEGGFGKVYKGRLESGQ-LVAIKQLNHEGLQGHQEFIV-EVLMLSLLHHDNL 103
+FR +++G G F +V + Q LVAIK + E L+G + + E+ +L + H N+
Sbjct: 21 DFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYD----LEPDQEPLSWNTRMKIAVGAARGLE 159
V L SG L+ + + G L D + + E D +R+ V A ++
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA------SRLIFQVLDA--VK 130
Query: 160 YLHCKANPPVIYRDLKSANIL---LDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
YLH + +++RDLK N+L LD D +SDFGL+K+ G V + GT GY
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---SVLSTACGTPGY 184
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
APE + D +S GV+ L+ G
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 53 IGEGGFGKVYKGRLE-SGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVT---- 105
IG G +G V R +GQ VAIK++ + + + + + E+ +L HDN++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L G+ + + Y+ + +E L+ + +PL+ RGL+Y+H
Sbjct: 122 LRPTVPYGEFKSV---YVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ 178
Query: 166 NPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAM 223
VI+RDLK +N+L++ + K+ DFG+A+ ++ + T + T Y APE +
Sbjct: 179 ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 235
Query: 224 S-GKLTLKSDIYSFGVVLLELITGRK 248
S + T D++S G + E++ R+
Sbjct: 236 SLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 25/210 (11%)
Query: 46 NFREANLIGEGGFGKVYKGRLESGQ-LVAIKQLNHEGLQGHQEFIV-EVLMLSLLHHDNL 103
+FR +++G G F +V + Q LVAIK + E L+G + + E+ +L + H N+
Sbjct: 21 DFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYD----LEPDQEPLSWNTRMKIAVGAARGLE 159
V L SG L+ + + G L D + + E D +R+ V A ++
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA------SRLIFQVLDA--VK 130
Query: 160 YLHCKANPPVIYRDLKSANIL---LDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
YLH + +++RDLK N+L LD D +SDFGL+K+ G V + GT GY
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGY 184
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
APE + D +S GV+ L+ G
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHHD 101
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 102 NLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
V L Y T D L + Y G L ++ + E TR A LE
Sbjct: 71 FFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALE 124
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
YLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y +P
Sbjct: 125 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 181
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITG 246
E SD+++ G ++ +L+ G
Sbjct: 182 ELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 16/206 (7%)
Query: 46 NFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNL 103
+F + + +G G G V+K + LV ++L H ++ + I E+ +L + +
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGAARGLEYL 161
V G S + + E+M GSL+ L P+Q K+++ +GL YL
Sbjct: 70 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYL 123
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
K +++RD+K +NIL+++ KL DFG++ G + D ++ +GT Y +PE
Sbjct: 124 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--MANEFVGTRSYMSPER 177
Query: 222 AMSGKLTLKSDIYSFGVVLLELITGR 247
+++SDI+S G+ L+E+ GR
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 16/212 (7%)
Query: 40 LAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSL 97
+ + +F + + +G G G V+K + LV ++L H ++ + I E+ +L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGAA 155
+ +V G S + + E+M GSL+ L P+Q K+++
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVI 114
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 215
+GL YL K +++RD+K +NIL+++ KL DFG++ G + D+ ++ +GT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 168
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
Y +PE +++SDI+S G+ L+E+ GR
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHHD 101
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 102 NLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
V L Y T D L + Y G L ++ + E TR A LE
Sbjct: 70 FFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALE 123
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
YLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y +P
Sbjct: 124 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 180
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITG 246
E SD+++ G ++ +L+ G
Sbjct: 181 ELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 40/216 (18%)
Query: 53 IGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLS--LLHHDNLVTLIGYC 110
+G+G +G+V++G + G+ VA+K + + + + E + + +L H+N++ I
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 111 T----SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLH---- 162
S Q L+ Y MGSL D+L D ++I + A GL +LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEIF 155
Query: 163 -CKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGP-------VGDNTHVSTRVMGTY 214
+ P + +RDLKS NIL+ + ++D GLA + VG+N V GT
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-----GTK 210
Query: 215 GYCAPEYAMSGKLTL-------KSDIYSFGVVLLEL 243
Y APE + + + + DI++FG+VL E+
Sbjct: 211 RYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 104/206 (50%), Gaps = 16/206 (7%)
Query: 46 NFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNL 103
+F + + +G G G V+K + LV ++L H ++ + I E+ +L + +
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGAARGLEYL 161
V G S + + E+M GSL+ L P+Q K+++ +GL YL
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYL 182
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
K +++RD+K +NIL+++ KL DFG++ G + D+ ++ +GT Y +PE
Sbjct: 183 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPER 236
Query: 222 AMSGKLTLKSDIYSFGVVLLELITGR 247
+++SDI+S G+ L+E+ GR
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 16/212 (7%)
Query: 40 LAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSL 97
+ + +F + + +G G G V+K + LV ++L H ++ + I E+ +L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGAA 155
+ +V G S + + E+M GSL+ L P+Q K+++
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVI 114
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 215
+GL YL K +++RD+K +NIL+++ KL DFG++ G + D+ ++ +GT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 168
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
Y +PE +++SDI+S G+ L+E+ GR
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F IG G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EYMP G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H +IYRDLK N+L+D K++DFG AK V R GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHHD 101
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 102 NLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
V L Y T D L + Y G L ++ + E TR A LE
Sbjct: 69 FFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALE 122
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
YLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y +P
Sbjct: 123 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 179
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITG 246
E SD+++ G ++ +L+ G
Sbjct: 180 ELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHH 100
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 101 DNLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
V L Y T D L + Y G L ++ + E TR A L
Sbjct: 89 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSAL 142
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYC 217
EYLH K +I+RDLK NILL+ D + +++DFG AK L P ++ V GT Y
Sbjct: 143 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYV 198
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITG 246
+PE SD+++ G ++ +L+ G
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 53 IGEGGFGKVYKGRLE-SGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVT---- 105
IG G +G V R +GQ VAIK++ + + + + + E+ +L HDN++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L G+ + + Y+ + +E L+ + +PL+ RGL+Y+H
Sbjct: 123 LRPTVPYGEFKSV---YVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ 179
Query: 166 NPPVIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAM 223
VI+RDLK +N+L++ + K+ DFG+A+ ++ + T + T Y APE +
Sbjct: 180 ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 236
Query: 224 S-GKLTLKSDIYSFGVVLLELITGRK 248
S + T D++S G + E++ R+
Sbjct: 237 SLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 46 NFREANLIGEGGFGKVYKGRLESGQ-LVAIKQLNHEGLQGHQEFIV-EVLMLSLLHHDNL 103
+FR +++G G F +V + Q LVAIK + E L+G + + E+ +L + H N+
Sbjct: 21 DFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
V L SG L+ + + G L D + + + + ++ ++YLH
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVLDAVKYLH- 133
Query: 164 KANPPVIYRDLKSANIL---LDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 220
+ +++RDLK N+L LD D +SDFGL+K+ G V + GT GY APE
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---SVLSTACGTPGYVAPE 188
Query: 221 YAMSGKLTLKSDIYSFGVVLLELITG 246
+ D +S GV+ L+ G
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F IG G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EYMP G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H +IYRDLK N+L+D K++DFG AK V R GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHHD 101
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 102 NLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
V L Y T D L + Y G L ++ + E TR A LE
Sbjct: 68 FFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALE 121
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
YLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y +P
Sbjct: 122 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 178
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITG 246
E SD+++ G ++ +L+ G
Sbjct: 179 ELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 12/212 (5%)
Query: 43 ATRNFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
+ ++ IG G +G V K SGQ++A+K++ + Q+ ++ L + + D
Sbjct: 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSD 79
Query: 102 N--LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
+V G + E M + + Y + + KI + + L
Sbjct: 80 CPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
H K N +I+RD+K +NILLD N KL DFG++ G + D+ TR G Y AP
Sbjct: 140 --HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVDSI-AKTRDAGCRPYMAP 194
Query: 220 E----YAMSGKLTLKSDIYSFGVVLLELITGR 247
E A ++SD++S G+ L EL TGR
Sbjct: 195 ERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 20/240 (8%)
Query: 35 FTFRELAIATRNFREANLIGEGGFGKV--YKGRLESGQLVAIKQLNHEGLQGHQEFIVEV 92
F + I +++ +GEGGF V +G L G A+K++ Q +E E
Sbjct: 19 FQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREA 77
Query: 93 LMLSLLHHDNLVTLIGYCT----SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRM 148
M L +H N++ L+ YC + + L+ + G+L + + L+ L+ + +
Sbjct: 78 DMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQIL 137
Query: 149 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPV---GDNTH 205
+ +G RGLE +H K +RDLK NILL ++ P L D G + G
Sbjct: 138 WLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQA 194
Query: 206 VSTRVMG----TYGYCAPE-YAMSGKLTL--KSDIYSFGVVLLELITGRKAMDLSKGQGE 258
++ + T Y APE +++ + ++D++S G VL ++ G D+ +G+
Sbjct: 195 LTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHH 100
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 101 DNLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
V L Y T D L + Y G L ++ + E TR A L
Sbjct: 74 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSAL 127
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
EYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y +
Sbjct: 128 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 184
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE SD+++ G ++ +L+ G
Sbjct: 185 PELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 14/206 (6%)
Query: 46 NFREANLIGEGGFGKVYKGRLESGQLV-AIKQLNHEGLQGHQE----FIVEVLMLSLLHH 100
+F +IG+G FGKV R ++ ++ A+K L + + +E ++L + H
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
LV L + D+ V +Y+ G L Y L+ ++ L R A A L Y
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGEL---FYHLQRERCFLEPRARF-YAAEIASALGY 154
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 220
LH ++YRDLK NILLD+ + L+DFGL K + N+ ST GT Y APE
Sbjct: 155 LHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKEN-IEHNSTTST-FCGTPEYLAPE 209
Query: 221 YAMSGKLTLKSDIYSFGVVLLELITG 246
D + G VL E++ G
Sbjct: 210 VLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 16/212 (7%)
Query: 40 LAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSL 97
+ + +F + + +G G G V+K + LV ++L H ++ + I E+ +L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGAA 155
+ +V G S + + E+M GSL+ L P+Q K+++
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVI 114
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 215
+GL YL K +++RD+K +NIL+++ KL DFG++ G + D+ ++ +GT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 168
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
Y +PE +++SDI+S G+ L+E+ GR
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 16/212 (7%)
Query: 40 LAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSL 97
+ + +F + + +G G G V+K + LV ++L H ++ + I E+ +L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 98 LHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGAA 155
+ +V G S + + E+M GSL+ L P+Q K+++
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVI 114
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 215
+GL YL K +++RD+K +NIL+++ KL DFG++ G + D+ ++ +GT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRS 168
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
Y +PE +++SDI+S G+ L+E+ GR
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 104/206 (50%), Gaps = 16/206 (7%)
Query: 46 NFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNL 103
+F + + +G G G V+K + LV ++L H ++ + I E+ +L + +
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGAARGLEYL 161
V G S + + E+M GSL+ L P+Q K+++ +GL YL
Sbjct: 94 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYL 147
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
K +++RD+K +NIL+++ KL DFG++ G + D+ ++ +GT Y +PE
Sbjct: 148 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPER 201
Query: 222 AMSGKLTLKSDIYSFGVVLLELITGR 247
+++SDI+S G+ L+E+ GR
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHH 100
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 101 DNLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
V L Y T D L + Y G L ++ + E TR A L
Sbjct: 93 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSAL 146
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYC 217
EYLH K +I+RDLK NILL+ D + +++DFG AK L P ++ V GT Y
Sbjct: 147 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYV 202
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITG 246
+PE SD+++ G ++ +L+ G
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHH 100
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 101 DNLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
V L Y T D L + Y G L ++ + E TR A L
Sbjct: 89 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSAL 142
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
EYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y +
Sbjct: 143 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 199
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE SD+++ G ++ +L+ G
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 36/270 (13%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G V K R + SGQ++A+K++ Q+ ++ L +S+ D T+ Y
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 112 ---SGDQRLLVYEYMP-MGSLEDHLYDLEPDQ-EPLSWNTRMKIAVGAARGLEYLHCKAN 166
GD V+ M M + D Y D+ + + + KIAV + LE+LH K +
Sbjct: 75 LFREGD----VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 130
Query: 167 PPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY---AM 223
VI+RD+K +N+L++ K+ DFG++ G + D+ G Y APE +
Sbjct: 131 --VIHRDVKPSNVLINALGQVKMCDFGIS--GYLVDDVAKDIDA-GCKPYMAPERINPEL 185
Query: 224 SGK-LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPL 282
+ K ++KSDI+S G+ ++EL R D SW PF + K+ V P
Sbjct: 186 NQKGYSVKSDIWSLGITMIELAILRFPYD-----------SWGTPF-QQLKQVVEEPSPQ 233
Query: 283 LHG-RYPRRCLNYAVAVTAMCLNEEANFRP 311
L ++ +++ T+ CL + + RP
Sbjct: 234 LPADKFSAEFVDF----TSQCLKKNSKERP 259
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHH 100
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 101 DNLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
V L Y T D L + Y G L ++ + E TR A L
Sbjct: 90 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSAL 143
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
EYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y +
Sbjct: 144 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE SD+++ G ++ +L+ G
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHH 100
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 101 DNLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
V L Y T D L + Y G L ++ + E TR A L
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSAL 145
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
EYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y +
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE SD+++ G ++ +L+ G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHH 100
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 101 DNLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
V L Y T D L + Y G L ++ + E TR A L
Sbjct: 90 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSAL 143
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
EYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y +
Sbjct: 144 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE SD+++ G ++ +L+ G
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 104/206 (50%), Gaps = 16/206 (7%)
Query: 46 NFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNL 103
+F + + +G G G V+K + LV ++L H ++ + I E+ +L + +
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 85
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGAARGLEYL 161
V G S + + E+M GSL+ L P+Q K+++ +GL YL
Sbjct: 86 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYL 139
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
K +++RD+K +NIL+++ KL DFG++ G + D+ ++ +GT Y +PE
Sbjct: 140 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPER 193
Query: 222 AMSGKLTLKSDIYSFGVVLLELITGR 247
+++SDI+S G+ L+E+ GR
Sbjct: 194 LQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHH 100
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 101 DNLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
V L Y T D L + Y G L ++ + E TR A L
Sbjct: 93 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSAL 146
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
EYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y +
Sbjct: 147 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 203
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE SD+++ G ++ +L+ G
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHH 100
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 101 DNLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
V L Y T D L + Y G L ++ + E TR A L
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSAL 145
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
EYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y +
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE SD+++ G ++ +L+ G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHH 100
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 101 DNLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
V L Y T D L + Y G L ++ + E TR A L
Sbjct: 90 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSAL 143
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
EYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y +
Sbjct: 144 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVS 200
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE SD+++ G ++ +L+ G
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHH 100
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 101 DNLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
V L Y T D L + Y G L ++ + E TR A L
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSAL 145
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
EYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y +
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE SD+++ G ++ +L+ G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHH 100
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 101 DNLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
V L Y T D L + Y G L ++ + E TR A L
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSAL 145
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
EYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y +
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE SD+++ G ++ +L+ G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHH 100
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 101 DNLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
V L Y T D L + Y G L ++ + E TR A L
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSAL 145
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
EYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y +
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE SD+++ G ++ +L+ G
Sbjct: 203 PELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHH 100
+F+ ++GEG F V R L + + AIK L + + E ++S L H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 101 DNLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
V L Y T D L + Y G L ++ + E TR A L
Sbjct: 95 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSAL 148
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
EYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y +
Sbjct: 149 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 205
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE SD+++ G ++ +L+ G
Sbjct: 206 PELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 25/211 (11%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIV------EVLMLSLL 98
+ + IGEG +G V+K R ++GQ+VAIK+ L+ + ++ E+ ML L
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF----LESEDDPVIKKIALREIRMLKQL 59
Query: 99 HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDH--LYDLEPDQEPLSWNTRMKIAVGAAR 156
H NLV L+ + LV+EY DH L++L+ Q + + I +
Sbjct: 60 KHPNLVNLLEVFRRKRRLHLVFEYC------DHTVLHELDRYQRGVPEHLVKSITWQTLQ 113
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
+ + H K N I+RD+K NIL+ KL DFG A+L G + + V T Y
Sbjct: 114 AVNFCH-KHN--CIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEV-ATRWY 168
Query: 217 CAPEYAM-SGKLTLKSDIYSFGVVLLELITG 246
+PE + + D+++ G V EL++G
Sbjct: 169 RSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 100/233 (42%), Gaps = 48/233 (20%)
Query: 46 NFREANLIGEGGFGKVYKGR--LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD-- 101
+F E ++G+G FG+V K R L+S + AIK++ H + + EV++L+ L+H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDS-RYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYV 64
Query: 102 -----------NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 150
N V + + EY +L D ++ +Q+ + ++
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY---WRL 121
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS--- 207
L Y+H + +I+RDLK NI +D N K+ DFGLAK N H S
Sbjct: 122 FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK------NVHRSLDI 172
Query: 208 ---------------TRVMGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELI 244
T +GT Y A E +G K D+YS G++ E+I
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 17/223 (7%)
Query: 37 FRELAIATRNFREANLIGEGGFGKVYKGRL--ESGQLV--AIKQLNHEGLQGH--QEFIV 90
++ I + F ++G+G FG V + +L E G V A+K L + + +EF+
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 91 EVLMLSLLHHDNLVTLIGYCTSGDQR------LLVYEYMPMGSLEDHLYDLEPDQEP--L 142
E + H ++ L+G + +++ +M G L L + P L
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 143 SWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGD 202
T ++ V A G+EYL + I+RDL + N +L D ++DFGL++ GD
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 203 NTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ A E T+ SD+++FGV + E++T
Sbjct: 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 53 IGEGGFGKVY-KGRLESGQLVAIKQLNHEGLQGHQEFI-VEVLMLSLLHHDNLVTLIGYC 110
+G G FG V+ SG IK +N + Q E I E+ +L L H N++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
+V E G L + + + + LS ++ L Y H + V+
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VV 146
Query: 171 YRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK 226
++DLK NIL D +P K+ DFGLA+L ++ ST GT Y APE
Sbjct: 147 HKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAPE-VFKRD 201
Query: 227 LTLKSDIYSFGVVLLELITG 246
+T K DI+S GVV+ L+TG
Sbjct: 202 VTFKCDIWSAGVVMYFLLTG 221
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 35/232 (15%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIV----EVLMLSLLHHDNLVTLI 107
IG+G FG+V+K R ++GQ VA+K++ E + + F + E+ +L LL H+N+V LI
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLI 82
Query: 108 GYCTSGDQRLLVYEYMPMGSLEDHLYDL----EPDQEPLSWNTRMKIAVGAAR------- 156
C + + P + +Y + E D L N +K + +
Sbjct: 83 EICRT--------KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 134
Query: 157 -GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS---TRVMG 212
GL Y+H +++RD+K+AN+L+ D KL+DFGLA+ + N+ + RV+
Sbjct: 135 NGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV- 190
Query: 213 TYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
T Y PE + + D++ G ++ E+ T M + Q + L+S
Sbjct: 191 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 242
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 31/230 (13%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIV--EVLMLSLLHHDNLVTLIGY 109
IG+G FG+V+K R ++GQ VA+K++ E + E+ +L LL H+N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 110 CTSGDQRLLVYEYMPMGSLEDHLYDL----EPDQEPLSWNTRMKIAVGAAR--------G 157
C + + P + +Y + E D L N +K + + G
Sbjct: 86 CRT--------KASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS---TRVMGTY 214
L Y+H +++RD+K+AN+L+ D KL+DFGLA+ + N+ + RV+ T
Sbjct: 138 LYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TL 193
Query: 215 GYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
Y PE + + D++ G ++ E+ T M + Q + L+S
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 243
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 35/232 (15%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIV----EVLMLSLLHHDNLVTLI 107
IG+G FG+V+K R ++GQ VA+K++ E + + F + E+ +L LL H+N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLI 83
Query: 108 GYCTSGDQRLLVYEYMPMGSLEDHLYDL----EPDQEPLSWNTRMKIAVGAAR------- 156
C + + P + +Y + E D L N +K + +
Sbjct: 84 EICRT--------KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 157 -GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS---TRVMG 212
GL Y+H +++RD+K+AN+L+ D KL+DFGLA+ + N+ + RV+
Sbjct: 136 NGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV- 191
Query: 213 TYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
T Y PE + + D++ G ++ E+ T M + Q + L+S
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 243
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 35/232 (15%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIV----EVLMLSLLHHDNLVTLI 107
IG+G FG+V+K R ++GQ VA+K++ E + + F + E+ +L LL H+N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLI 83
Query: 108 GYCTSGDQRLLVYEYMPMGSLEDHLYDL----EPDQEPLSWNTRMKIAVGAAR------- 156
C + + P + +Y + E D L N +K + +
Sbjct: 84 EICRT--------KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 157 -GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS---TRVMG 212
GL Y+H +++RD+K+AN+L+ D KL+DFGLA+ + N+ + RV+
Sbjct: 136 NGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV- 191
Query: 213 TYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
T Y PE + + D++ G ++ E+ T M + Q + L+S
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 243
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 15/214 (7%)
Query: 45 RNFREANLIGEGGFGKVYK-GRLESGQLVAIKQLNHEGL-QGHQE--FIVEVLMLSLLHH 100
+ + +G+GGF K Y+ +++ ++ A K + L + HQ+ E+ + L +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
++V G+ D +V E SL +L ++ ++ +G++Y
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCAP 219
LH N VI+RDLK N+ L++D + K+ DFGLA K+ G+ + GT Y AP
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT---LCGTPNYIAP 211
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 253
E + + DI+S G +L L+ G+ + S
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F IG G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D K++DFG AK V R GT Y A
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 25/210 (11%)
Query: 46 NFREANLIGEGGFGKVYKGRLESGQ-LVAIKQLNHEGLQGHQEFIV-EVLMLSLLHHDNL 103
+FR +++G G F +V + Q LVAIK + + L+G + + E+ +L + H N+
Sbjct: 21 DFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNI 78
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYD----LEPDQEPLSWNTRMKIAVGAARGLE 159
V L SG L+ + + G L D + + E D +R+ V A ++
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA------SRLIFQVLDA--VK 130
Query: 160 YLHCKANPPVIYRDLKSANIL---LDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
YLH + +++RDLK N+L LD D +SDFGL+K+ G V + GT GY
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGY 184
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
APE + D +S GV+ L+ G
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHH 100
+F+ ++GEG F R L + + AIK L + + E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 101 DNLVTLIGYCTSGDQRLLVY--EYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGL 158
V L Y T D L + Y G L ++ + E TR A L
Sbjct: 90 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSAL 143
Query: 159 EYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
EYLH K +I+RDLK NILL+ D + +++DFG AK+ + +GT Y +
Sbjct: 144 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE SD+++ G ++ +L+ G
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 45 RNFREANLIGEGGFGKVYK-GRLESGQLVAIKQLNHEGL-QGHQE--FIVEVLMLSLLHH 100
+ + +G+GGF K Y+ +++ ++ A K + L + HQ+ E+ + L +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
++V G+ D +V E SL +L ++ ++ +G++Y
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 220
LH N VI+RDLK N+ L++D + K+ DFGLA + + + GT Y APE
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKXLCGTPNYIAPE 212
Query: 221 YAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 253
+ + DI+S G +L L+ G+ + S
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGH---QEFIVEVLMLSLLHHDNLVTLIG 108
+G G +G V SG+ VAIK+L+ Q + E+L+L + H+N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRP-FQSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 109 YCTSGDQRLLVYEY---MP-MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
T Y++ MP M + + +E +E + + + +GL+Y+H
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIHSA 163
Query: 165 ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS 224
V++RDLK N+ ++ D K+ DFGLA+ +V TR Y APE +S
Sbjct: 164 G---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILS 215
Query: 225 G-KLTLKSDIYSFGVVLLELITGR 247
DI+S G ++ E++TG+
Sbjct: 216 WMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 45 RNFREANLIGEGGFGKVYK-GRLESGQLVAIKQLNHEGL-QGHQE--FIVEVLMLSLLHH 100
+ + +G+GGF K Y+ +++ ++ A K + L + HQ+ E+ + L +
Sbjct: 26 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 85
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
++V G+ D +V E SL +L ++ ++ +G++Y
Sbjct: 86 PHVVGFHGFFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQY 141
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 220
LH N VI+RDLK N+ L++D + K+ DFGLA + + + GT Y APE
Sbjct: 142 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPNYIAPE 196
Query: 221 YAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 253
+ + DI+S G +L L+ G+ + S
Sbjct: 197 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 45 RNFREANLIGEGGFGKVYK-GRLESGQLVAIKQLNHEGL-QGHQE--FIVEVLMLSLLHH 100
+ + +G+GGF K Y+ +++ ++ A K + L + HQ+ E+ + L +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
++V G+ D +V E SL +L ++ ++ +G++Y
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 220
LH N VI+RDLK N+ L++D + K+ DFGLA + + + GT Y APE
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPNYIAPE 212
Query: 221 YAMSGKLTLKSDIYSFGVVLLELITGRKAMDLS 253
+ + DI+S G +L L+ G+ + S
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHHD 101
F +G G FG+V + +E+G A+K L+ + + +E + E +L ++
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY P G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H +IYRDLK N+++D K++DFGLAK V R GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGH---QEFIVEVLMLSLLHHDNLVTLIG 108
+G G +G V SG+ VAIK+L+ Q + E+L+L + H+N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 109 YCTSGDQRLLVYEY---MP-MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
T Y++ MP M + + L+ +E + + + +GL+Y+H
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIHSA 145
Query: 165 ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS 224
V++RDLK N+ ++ D K+ DFGLA+ +V TR Y APE +S
Sbjct: 146 G---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILS 197
Query: 225 G-KLTLKSDIYSFGVVLLELITGR 247
DI+S G ++ E++TG+
Sbjct: 198 WMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 47 FREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQGHQEFIV-EVLMLSLLHHDNLV 104
F +G G F +V + +G+L A+K + + L+G + I E+ +L + H+N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYD----LEPDQEPLSWNTRMKIAVGAARGLEY 160
L S + LV + + G L D + + E D +T ++ + A + Y
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDA-----STLIRQVLDA---VYY 135
Query: 161 LHCKANPPVIYRDLKSANILL---DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
LH +++RDLK N+L D + +SDFGL+K+ GD V + GT GY
Sbjct: 136 LH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGTPGYV 189
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITG 246
APE + D +S GV+ L+ G
Sbjct: 190 APEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 89/204 (43%), Gaps = 22/204 (10%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGY 109
IG G F VYKG E+ VA +L L Q F E L L H N+V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 110 CTSGDQR----LLVYEYMPMGSLEDHLYDLEPDQEPL--SWNTRMKIAVGAARGLEYLHC 163
S + +LV E G+L+ +L + + + SW ++ +GL++LH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLHT 147
Query: 164 KANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA 222
+ PP+I+RDLK NI + K+ D GLA L + V+GT + APE
Sbjct: 148 R-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPE-X 201
Query: 223 MSGKLTLKSDIYSFGVVLLELITG 246
K D+Y+FG LE T
Sbjct: 202 YEEKYDESVDVYAFGXCXLEXATS 225
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 34/218 (15%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQG E+ ++ L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 130
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRV 210
R L Y+H + +RD+K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 211 MGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
Y APE + T D++S G VL EL+ G+
Sbjct: 188 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G +G V K R + SGQ+ A+K++ Q+ ++ L +S D T+ Y
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 112 ---SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 168
GD + + + SL+ + + + + KIAV + LE+LH K +
Sbjct: 102 LFREGD--VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 157
Query: 169 VIYRDLKSANILLDNDFNPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAMSGK 226
VI+RD+K +N+L++ K DFG++ + V + + PE G
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKG- 216
Query: 227 LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHG- 285
++KSDI+S G+ +EL R D SW PF + K+ V P L
Sbjct: 217 YSVKSDIWSLGITXIELAILRFPYD-----------SWGTPF-QQLKQVVEEPSPQLPAD 264
Query: 286 RYPRRCLNYAVAVTAMCLNEEANFRP 311
++ +++ T+ CL + + RP
Sbjct: 265 KFSAEFVDF----TSQCLKKNSKERP 286
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 34/218 (15%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQG E+ ++ L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 130
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRV 210
R L Y+H + +RD+K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 211 MGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
Y APE + T D++S G VL EL+ G+
Sbjct: 188 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 23/209 (11%)
Query: 46 NFREANLIGEGGFGKVYKGRLESGQ-LVAIK-----QLNHEGLQGHQEFIVEVLMLSLLH 99
+F +G+G FG VY R + +VA+K Q+ EG++ + E+ + + LH
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE--HQLRREIEIQAHLH 81
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGA--ARG 157
H N++ L Y + L+ EY P G L L Q+ +++ + + A
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKEL------QKSCTFDEQRTATIMEELADA 135
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L Y H K VI+RD+K N+LL K++DFG + P + + GT Y
Sbjct: 136 LMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAP----SLRRKTMCGTLDYL 188
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE K D++ GV+ EL+ G
Sbjct: 189 PPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 30/225 (13%)
Query: 35 FTFRELAIATRNFREANLIGEGGFGKVY--KGRLESGQLVAIKQLNHEGLQ---GHQEFI 89
F AI + ++ ++G+G FG+V K ++ +GQ A+K ++ ++ + +
Sbjct: 22 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLL 80
Query: 90 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 149
EV +L L H N++ L + LV E G L D + ++ S +
Sbjct: 81 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAAR 136
Query: 150 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTHV 206
I G+ Y+H +++RDLK N+LL++ D N ++ DFGL+ TH
Sbjct: 137 IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THF 185
Query: 207 STR-----VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
+GT Y APE + G K D++S GV+L L++G
Sbjct: 186 EASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 53 IGEGGFGKVYKG-RLESG---QL----VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
+G+G F K++KG R E G QL V +K L+ + F M+S L H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
G C GD+ +LV E++ GSL+ + L+ ++ ++ ++++A A + +L
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTY---LKKNKNCINILWKLEVAKQLAAAMHFLEEN 132
Query: 165 ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR--VMGTYGYCAPEYA 222
+I+ ++ + NILL + + K + KL G + V + + + PE
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI 189
Query: 223 MSGK-LTLKSDIYSFGVVLLELITG 246
+ K L L +D +SFG L E+ +G
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 30/225 (13%)
Query: 35 FTFRELAIATRNFREANLIGEGGFGKVY--KGRLESGQLVAIKQLNHEGLQ---GHQEFI 89
F AI + ++ ++G+G FG+V K ++ +GQ A+K ++ ++ + +
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLL 74
Query: 90 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 149
EV +L L H N++ L + LV E G L D + ++ S +
Sbjct: 75 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAAR 130
Query: 150 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTHV 206
I G+ Y+H +++RDLK N+LL++ D N ++ DFGL+ TH
Sbjct: 131 IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THF 179
Query: 207 STR-----VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
+GT Y APE + G K D++S GV+L L++G
Sbjct: 180 EASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 16/205 (7%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + +I + EYL
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
H + +IYRDLK N+L+D +++DFG AK V T + GT Y APE
Sbjct: 159 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWT---LCGTPEYLAPEI 210
Query: 222 AMSGKLTLKSDIYSFGVVLLELITG 246
+S D ++ GV++ E+ G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 87
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + R A EYL
Sbjct: 88 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYL 143
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
H + +IYRDLK N+L+D +++DFG AK V T + GT Y APE
Sbjct: 144 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWT---LCGTPEYLAPEI 195
Query: 222 AMSGKLTLKSDIYSFGVVLLELITG 246
+S D ++ GV++ E+ G
Sbjct: 196 ILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY P G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H +IYRDLK N+++D K++DFG AK V R GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 30/216 (13%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQ + E+ ++ L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ +VY + + + + +Y + +R K +
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 130
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMG 212
R L Y+H + +RD+K N+LLD D KL DFG AK G+ + +
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 184
Query: 213 TYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
+ Y APE + T D++S G VL EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 17/212 (8%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQL----NHEGLQGHQEFIVEVLMLSLLH 99
+ + + IGEG +G V+K + E+ ++VA+K++ + EG+ + E+ +L L
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA--LREICLLKELK 59
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H N+V L S + LV+E+ L+ + D +P +GL
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDP---EIVKSFLFQLLKGLG 115
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
+ H + V++RDLK N+L++ + KL+DFGLA+ G + + T Y P
Sbjct: 116 FCHSRN---VLHRDLKPQNLLINRNGELKLADFGLARA--FGIPVRCYSAEVVTLWYRPP 170
Query: 220 EYAMSGKLTLKS-DIYSFGVVLLELITGRKAM 250
+ KL S D++S G + EL + +
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + +I + EYL
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 159 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 27/226 (11%)
Query: 34 SFTFRELAIATRNFREANLIGEGGFGKVYKGRLESG---QLVAIKQLNHEGLQGHQEFIV 90
S +E I LIG+G FG+VY GR +L+ I++ N + L+ F
Sbjct: 22 SIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKA---FKR 78
Query: 91 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQE-PLSWNTRMK 149
EV+ H+N+V +G C S L + + G LY + D + L N +
Sbjct: 79 EVMAYRQTRHENVVLFMGACMSPPH-LAIITSLCKGRT---LYSVVRDAKIVLDVNKTRQ 134
Query: 150 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR 209
IA +G+ YLH K ++++DLKS N+ DN ++DFGL + V +
Sbjct: 135 IAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDK 190
Query: 210 VMGTYGY-C--APEY-------AMSGKLTLK--SDIYSFGVVLLEL 243
+ G+ C APE KL SD+++ G + EL
Sbjct: 191 LRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 49 EANLIGEGGFGKVYK-GRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLI 107
+ ++G G FG+V+K +G +A K + G++ +E E+ +++ L H NL+ L
Sbjct: 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLY 152
Query: 108 GYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANP 167
S + +LV EY+ G L D + D + L MK R + ++
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY----- 207
Query: 168 PVIYRDLKSANILLDNDFNP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG 225
+++ DLK NIL N K+ DFGLA+ + V+ GT + APE
Sbjct: 208 -ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLAPEVVNYD 263
Query: 226 KLTLKSDIYSFGVVLLELITG 246
++ +D++S GV+ L++G
Sbjct: 264 FVSFPTDMWSVGVIAYMLLSG 284
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 38 RELAIATRNFREANLIGEGGFGKVYKGRLESGQ----LVAIKQL-NHEGLQGHQEFIVEV 92
R+ I IGEG FG V++G S + VAIK N ++F+ E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 93 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 152
L + H ++V LIG T + ++ E +G L L + + L + + A
Sbjct: 63 LTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAY 118
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-STRVM 211
+ L YL K ++RD+ + N+L+ ++ KL DFGL++ + D+T+ +++
Sbjct: 119 QLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGK 173
Query: 212 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
+ APE + T SD++ FGV + E++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHHD 101
F +G G FG+V + +E+G A+K L+ + + +E + E +L ++
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY P G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H +IYRDLK N+++D +++DFGLAK V R GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY P G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H +IYRDLK N+++D K++DFG AK V R GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + +I + EYL
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYL 158
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 159 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 30/225 (13%)
Query: 35 FTFRELAIATRNFREANLIGEGGFGKVY--KGRLESGQLVAIKQLNHEGLQ---GHQEFI 89
F AI + ++ ++G+G FG+V K ++ +GQ A+K ++ ++ + +
Sbjct: 39 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLL 97
Query: 90 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 149
EV +L L H N++ L + LV E G L D + ++ S +
Sbjct: 98 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAAR 153
Query: 150 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTHV 206
I G+ Y+H +++RDLK N+LL++ D N ++ DFGL+ TH
Sbjct: 154 IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THF 202
Query: 207 STR-----VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
+GT Y APE + G K D++S GV+L L++G
Sbjct: 203 EASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 38 RELAIATRNFREANLIGEGGFGKVYKGRLESGQ----LVAIKQL-NHEGLQGHQEFIVEV 92
R+ I IGEG FG V++G S + VAIK N ++F+ E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 62
Query: 93 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 152
L + H ++V LIG T + ++ E +G L L + + L + + A
Sbjct: 63 LTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAY 118
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-STRVM 211
+ L YL K ++RD+ + N+L+ ++ KL DFGL++ + D+T+ +++
Sbjct: 119 QLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGK 173
Query: 212 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
+ APE + T SD++ FGV + E++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 38 RELAIATRNFREANLIGEGGFGKVYKGRLESGQ----LVAIKQL-NHEGLQGHQEFIVEV 92
R+ I IGEG FG V++G S + VAIK N ++F+ E
Sbjct: 31 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 90
Query: 93 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 152
L + H ++V LIG T + ++ E +G L L + + L + + A
Sbjct: 91 LTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAY 146
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-STRVM 211
+ L YL K ++RD+ + N+L+ ++ KL DFGL++ + D+T+ +++
Sbjct: 147 QLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGK 201
Query: 212 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
+ APE + T SD++ FGV + E++
Sbjct: 202 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 38 RELAIATRNFREANLIGEGGFGKVYKGRLESGQ----LVAIKQL-NHEGLQGHQEFIVEV 92
R+ I IGEG FG V++G S + VAIK N ++F+ E
Sbjct: 8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 67
Query: 93 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 152
L + H ++V LIG T + ++ E +G L L + + L + + A
Sbjct: 68 LTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAY 123
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-STRVM 211
+ L YL K ++RD+ + N+L+ ++ KL DFGL++ + D+T+ +++
Sbjct: 124 QLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGK 178
Query: 212 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
+ APE + T SD++ FGV + E++
Sbjct: 179 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 30/225 (13%)
Query: 35 FTFRELAIATRNFREANLIGEGGFGKVY--KGRLESGQLVAIKQLNHEGLQ---GHQEFI 89
F AI + ++ ++G+G FG+V K ++ +GQ A+K ++ ++ + +
Sbjct: 40 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLL 98
Query: 90 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 149
EV +L L H N++ L + LV E G L D + ++ S +
Sbjct: 99 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAAR 154
Query: 150 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTHV 206
I G+ Y+H +++RDLK N+LL++ D N ++ DFGL+ TH
Sbjct: 155 IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THF 203
Query: 207 STR-----VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
+GT Y APE + G K D++S GV+L L++G
Sbjct: 204 EASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 15/217 (6%)
Query: 34 SFTFRELAIATRNFREANLIGEGGFGKVYKGRLESGQ----LVAIKQL-NHEGLQGHQEF 88
S + R+ I IGEG FG V++G S + VAIK N ++F
Sbjct: 2 SGSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF 61
Query: 89 IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRM 148
+ E L + H ++V LIG T + ++ E +G L L + + L + +
Sbjct: 62 LQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDLASLI 117
Query: 149 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-S 207
A + L YL K ++RD+ + N+L+ ++ KL DFGL++ + D+T+ +
Sbjct: 118 LYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKA 172
Query: 208 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
++ + APE + T SD++ FGV + E++
Sbjct: 173 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 107/249 (42%), Gaps = 27/249 (10%)
Query: 53 IGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL 106
+G+G FG VY R + + + A+K QL EG++ + E+ + S L H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRM 79
Query: 107 IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKAN 166
Y + L+ E+ P G L L E S ++A L Y H +
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA----DALHYCHERK- 134
Query: 167 PPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM-GTYGYCAPEYAMSG 225
VI+RD+K N+L+ K++DFG + P + R M GT Y PE
Sbjct: 135 --VIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGK 187
Query: 226 KLTLKSDIYSFGVVLLELITGRKAMDL-SKGQGEQNLVSWS---RPFLKDQKKFVHLVDP 281
K D++ GV+ E + G D S + + +V+ PFL D K L+
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSK--DLISK 245
Query: 282 LLHGRYPRR 290
LL P+R
Sbjct: 246 LLRYHPPQR 254
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 17/205 (8%)
Query: 53 IGEGGFGKVYKG-RLESGQL-------VAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
+G+G F K++KG R E G V +K L+ + F M+S L H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
G C GD+ +LV E++ GSL+ + L+ ++ ++ ++++A A + +L
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTY---LKKNKNCINILWKLEVAKQLAWAMHFLEEN 132
Query: 165 ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTR--VMGTYGYCAPEYA 222
+I+ ++ + NILL + + K + KL G + V + + + PE
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI 189
Query: 223 MSGK-LTLKSDIYSFGVVLLELITG 246
+ K L L +D +SFG L E+ +G
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 97/216 (44%), Gaps = 34/216 (15%)
Query: 47 FREANLIGEGGFGKV---YKGRLESGQLVAIKQLNHEGLQGH---QEFIVEVLMLSLLHH 100
+R+ +G G +G V GR +G VAIK+L + Q + E+ +L + H
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGR--TGAKVAIKKL-YRPFQSELFAKRAYRELRLLKHMRH 83
Query: 101 DNLVTLIGYCTSG---DQRLLVYEYMP-----MGSLEDHLYDLEPDQEPLSWNTRMKIAV 152
+N++ L+ T D Y MP +G L H E L + +
Sbjct: 84 ENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH--------EKLGEDRIQFLVY 135
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG 212
+GL Y+H +I+RDLK N+ ++ D K+ DFGLA+ V TR
Sbjct: 136 QMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR--- 189
Query: 213 TYGYCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
Y APE ++ + T DI+S G ++ E+ITG+
Sbjct: 190 --WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 107/249 (42%), Gaps = 27/249 (10%)
Query: 53 IGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL 106
+G+G FG VY R + + + A+K QL EG++ + E+ + S L H N++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRM 80
Query: 107 IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKAN 166
Y + L+ E+ P G L L E S ++A L Y H +
Sbjct: 81 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA----DALHYCHERK- 135
Query: 167 PPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM-GTYGYCAPEYAMSG 225
VI+RD+K N+L+ K++DFG + P + R M GT Y PE
Sbjct: 136 --VIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGK 188
Query: 226 KLTLKSDIYSFGVVLLELITGRKAMDL-SKGQGEQNLVSWS---RPFLKDQKKFVHLVDP 281
K D++ GV+ E + G D S + + +V+ PFL D K L+
Sbjct: 189 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSK--DLISK 246
Query: 282 LLHGRYPRR 290
LL P+R
Sbjct: 247 LLRYHPPQR 255
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 38 RELAIATRNFREANLIGEGGFGKVYKGRLESGQ----LVAIKQL-NHEGLQGHQEFIVEV 92
R+ I IGEG FG V++G S + VAIK N ++F+ E
Sbjct: 5 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 64
Query: 93 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 152
L + H ++V LIG T + ++ E +G L L + + L + + A
Sbjct: 65 LTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAY 120
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-STRVM 211
+ L YL K ++RD+ + N+L+ ++ KL DFGL++ + D+T+ +++
Sbjct: 121 QLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGK 175
Query: 212 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
+ APE + T SD++ FGV + E++
Sbjct: 176 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 107/249 (42%), Gaps = 27/249 (10%)
Query: 53 IGEGGFGKVYKGRLESGQLV-AIK-----QLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL 106
+G+G FG VY R + + + A+K QL EG++ + E+ + S L H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRM 79
Query: 107 IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKAN 166
Y + L+ E+ P G L L E S ++A L Y H +
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA----DALHYCHERK- 134
Query: 167 PPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM-GTYGYCAPEYAMSG 225
VI+RD+K N+L+ K++DFG + P + R M GT Y PE
Sbjct: 135 --VIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGK 187
Query: 226 KLTLKSDIYSFGVVLLELITGRKAMDL-SKGQGEQNLVSWS---RPFLKDQKKFVHLVDP 281
K D++ GV+ E + G D S + + +V+ PFL D K L+
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSK--DLISK 245
Query: 282 LLHGRYPRR 290
LL P+R
Sbjct: 246 LLRYHPPQR 254
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQG E+ ++ L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 105 TL-IGYCTSGDQRLLVY-----EYMPMG--SLEDHLYDLEPDQEPLSWNTRMKIAV-GAA 155
L + +SG+++ VY +Y+P + H Y P+ + +K+ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARH-YSRAKQTLPVIY---VKLYMYQLF 132
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R L Y+H + +RD+K N+LLD D KL DFG AK G+ + + +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 186
Query: 215 GYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
Y APE + T D++S G VL EL+ G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 21/219 (9%)
Query: 53 IGEGGFGKV-YKGRLESGQLVAIKQLNHEGLQGHQEF---IVEVLMLSLLHHDNLVTLIG 108
IG+G FGKV + ++ ++ A+K +N + E E+ ++ L H LV L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 109 YCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTR-MKIAVGA-ARGLEYLHCKAN 166
+ +V + + G L HL Q+ + + +K+ + L+YL N
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHL------QQNVHFKEETVKLFICELVMALDYLQ---N 133
Query: 167 PPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK 226
+I+RD+K NILLD + ++DF +A + P T ++T + GT Y APE S K
Sbjct: 134 QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP--RETQITT-MAGTKPYMAPEMFSSRK 190
Query: 227 ---LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLV 262
+ D +S GV EL+ GR+ + + +V
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 34/218 (15%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQ + E+ ++ L H N+V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 89
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 143
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRV 210
R L Y+H + +RD+K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 144 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 200
Query: 211 MGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
Y APE + T D++S G VL EL+ G+
Sbjct: 201 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 52 LIGEGGFGKVYK------GRLESGQLVAIKQLNHEGLQGHQ--EFIVEVLMLSLLHHDNL 103
+G+GGF K ++ + +G++V L L+ HQ + +E+ + L H ++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLL----LKPHQREKMSMEISIHRSLAHQHV 77
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
V G+ D +V E SL + + EP + +I +G +YLH
Sbjct: 78 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLHR 133
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCAPEYA 222
VI+RDLK N+ L+ D K+ DFGLA K+ G+ V + GT Y APE
Sbjct: 134 NR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVL 187
Query: 223 MSGKLTLKSDIYSFGVVLLELITGRKAMDLS 253
+ + D++S G ++ L+ G+ + S
Sbjct: 188 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 52 LIGEGGFGKVYK------GRLESGQLVAIKQLNHEGLQGHQ--EFIVEVLMLSLLHHDNL 103
+G+GGF K ++ + +G++V L L+ HQ + +E+ + L H ++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLL----LKPHQREKMSMEISIHRSLAHQHV 101
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
V G+ D +V E SL + + EP + +I +G +YLH
Sbjct: 102 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLHR 157
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCAPEYA 222
VI+RDLK N+ L+ D K+ DFGLA K+ G+ V + GT Y APE
Sbjct: 158 NR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVL 211
Query: 223 MSGKLTLKSDIYSFGVVLLELITGRKAMDLS 253
+ + D++S G ++ L+ G+ + S
Sbjct: 212 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 34/218 (15%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQ + E+ ++ L H N+V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 112
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 166
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRV 210
R L Y+H + +RD+K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 167 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 223
Query: 211 MGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
Y APE T D++S G VL EL+ G+
Sbjct: 224 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 52 LIGEGGFGKVYK------GRLESGQLVAIKQLNHEGLQGHQ--EFIVEVLMLSLLHHDNL 103
+G+GGF K ++ + +G++V L L+ HQ + +E+ + L H ++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLL----LKPHQREKMSMEISIHRSLAHQHV 103
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
V G+ D +V E SL + + EP + +I +G +YLH
Sbjct: 104 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLHR 159
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCAPEYA 222
VI+RDLK N+ L+ D K+ DFGLA K+ G+ V + GT Y APE
Sbjct: 160 NR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVL 213
Query: 223 MSGKLTLKSDIYSFGVVLLELITGRKAMDLS 253
+ + D++S G ++ L+ G+ + S
Sbjct: 214 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 22/222 (9%)
Query: 36 TFRELAIATRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQG------HQEF 88
TFR+ + ++ +G G F V K R + +G+ A K + L +E
Sbjct: 4 TFRQEDVED-HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEI 62
Query: 89 IVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRM 148
EV +L + H N++TL + +L+ E + G L +D ++E L+ +
Sbjct: 63 EREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL----FDFLAEKESLTEDEAT 118
Query: 149 KIAVGAARGLEYLHCKANPPVIYRDLKSANILL--DNDFNP--KLSDFGLAKLGPVGDNT 204
+ G+ YLH K + + DLK NI+L N NP KL DFG+A G+
Sbjct: 119 QFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 175
Query: 205 HVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
+ GT + APE L L++D++S GV+ L++G
Sbjct: 176 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 34/218 (15%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQ + E+ ++ L H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 110
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 164
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRV 210
R L Y+H + +RD+K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 165 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 221
Query: 211 MGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
Y APE + T D++S G VL EL+ G+
Sbjct: 222 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 34/218 (15%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQ + E+ ++ L H N+V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 81
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 135
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRV 210
R L Y+H + +RD+K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 136 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 192
Query: 211 MGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
Y APE + T D++S G VL EL+ G+
Sbjct: 193 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 34/218 (15%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQ + E+ ++ L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 130
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRV 210
R L Y+H + +RD+K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 211 MGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
Y APE + T D++S G VL EL+ G+
Sbjct: 188 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 34/218 (15%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQ + E+ ++ L H N+V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 104
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 158
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRV 210
R L Y+H + +RD+K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 159 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 215
Query: 211 MGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
Y APE + T D++S G VL EL+ G+
Sbjct: 216 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 34/218 (15%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQ + E+ ++ L H N+V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 114
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 168
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRV 210
R L Y+H + +RD+K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 169 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 225
Query: 211 MGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
Y APE T D++S G VL EL+ G+
Sbjct: 226 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 34/218 (15%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQ + E+ ++ L H N+V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 155
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 209
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDN--THVSTRV 210
R L Y+H + +RD+K N+LLD D KL DFG AK G+ +++ +R
Sbjct: 210 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 266
Query: 211 MGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
Y APE T D++S G VL EL+ G+
Sbjct: 267 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQ + E+ ++ L H N+V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 84
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 138
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMG 212
R L Y+H + +RD+K N+LLD D KL DFG AK G+ + +
Sbjct: 139 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 192
Query: 213 TYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
+ Y APE + T D++S G VL EL+ G+
Sbjct: 193 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 113/230 (49%), Gaps = 37/230 (16%)
Query: 45 RNFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGH---QEFIVEVLMLSLLH- 99
R + +G+G +G V+K +G++VA+K++ + Q Q E+++L+ L
Sbjct: 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI-FDAFQNSTDAQRTFREIMILTELSG 67
Query: 100 HDNLVTLIGYCTSGDQR--LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
H+N+V L+ + + R LV++YM + H EP+ + + +
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVH---KQYVVYQLIKV 121
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK----LGPVGDNTHVS------ 207
++YLH +++RD+K +NILL+ + + K++DFGL++ + V +N +S
Sbjct: 122 IKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTE 178
Query: 208 ---------TRVMGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
T + T Y APE + S K T D++S G +L E++ G+
Sbjct: 179 NFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 38 RELAIATRNFREANLIGEGGFGKVYKGRLESGQ----LVAIKQL-NHEGLQGHQEFIVEV 92
R+ I IGEG FG V++G S + VAIK N ++F+ E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 93 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 152
L + H ++V LIG T + ++ E +G L L + + L + + A
Sbjct: 63 LTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKFSLDLASLILYAY 118
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-STRVM 211
+ L YL K ++RD+ + N+L+ ++ KL DFGL++ + D+T +++
Sbjct: 119 QLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTXXKASKGK 173
Query: 212 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
+ APE + T SD++ FGV + E++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY P G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H +IYRDLK N+++D +++DFG AK V R GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 30/216 (13%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQ + E+ ++ L H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 110
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 164
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMG 212
R L Y+H + +RD+K N+LLD D KL DFG AK G+ +VS +
Sbjct: 165 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSX-ICS 219
Query: 213 TYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
Y Y APE + T D++S G VL EL+ G+
Sbjct: 220 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
L L +V EY P G + HL + EP + +I + EYL
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H +IYRDLK N+++D K++DFG AK V R GT Y A
Sbjct: 159 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQ + E+ ++ L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 130
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMG 212
R L Y+H + +RD+K N+LLD D KL DFG AK G+ + +
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 184
Query: 213 TYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
+ Y APE + T D++S G VL EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQ + E+ ++ L H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 88
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 142
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMG 212
R L Y+H + +RD+K N+LLD D KL DFG AK G+ + +
Sbjct: 143 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 196
Query: 213 TYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
+ Y APE + T D++S G VL EL+ G+
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQ + E+ ++ L H N+V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 95
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 149
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMG 212
R L Y+H + +RD+K N+LLD D KL DFG AK G+ + +
Sbjct: 150 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 203
Query: 213 TYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
+ Y APE + T D++S G VL EL+ G+
Sbjct: 204 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
L L +V EY P G + HL + EP + +I + EYL
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H +IYRDLK N+++D K++DFG AK V R GT Y A
Sbjct: 159 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQ + E+ ++ L H N+V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 77
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 131
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMG 212
R L Y+H + +RD+K N+LLD D KL DFG AK G+ + +
Sbjct: 132 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 185
Query: 213 TYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
+ Y APE + T D++S G VL EL+ G+
Sbjct: 186 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + E+G A+K L+ + L+ + + E +L ++
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQ + E+ ++ L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 130
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMG 212
R L Y+H + +RD+K N+LLD D KL DFG AK G+ + +
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 184
Query: 213 TYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
+ Y APE + T D++S G VL EL+ G+
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 44 TRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHD 101
+ +F+ +L+GEG +G V + +G++VAIK++ + + E+ +L H+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
N++T+ Y+ ++ L+ + Q LS + R ++ L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM-LSDDHIQYFIYQTLRAVKVL 128
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL--GPVGDNTHVS------TRVMGT 213
H VI+RDLK +N+L++++ + K+ DFGLA++ DN+ + T + T
Sbjct: 129 HGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 214 YGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
Y APE + S K + D++S G +L EL R
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + E+G A+K L+ + L+ + + E +L ++
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQ + E+ ++ L H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 88
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 142
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMG 212
R L Y+H + +RD+K N+LLD D KL DFG AK G+ + +
Sbjct: 143 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 196
Query: 213 TYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
+ Y APE + T D++S G VL EL+ G+
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 53 IGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQG------HQEFIVEVLMLSLLHHDNLVT 105
+G G F V K R + +G+ A K + L +E EV +L + H N++T
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L + +L+ E + G L +D ++E L+ + + G+ YLH K
Sbjct: 73 LHDIFENKTDVVLILELVSGGEL----FDFLAEKESLTEDEATQFLKQILDGVHYLHSKR 128
Query: 166 NPPVIYRDLKSANILL--DNDFNP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
+ + DLK NI+L N NP KL DFG+A G+ + GT + APE
Sbjct: 129 ---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEI 182
Query: 222 AMSGKLTLKSDIYSFGVVLLELITG 246
L L++D++S GV+ L++G
Sbjct: 183 VNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + E+G A+K L+ + L+ + + E +L ++
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + +I + EYL
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 159 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + E+G A+K L+ + L+ + + E +L ++
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY P G + HL + EP + +I + EYL
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+++D K++DFG AK V R GT Y A
Sbjct: 159 H---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + E+G A+K L+ + L+ + + E +L ++
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + +I + EYL
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 159 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 35 FTFRELAIATRNFREANLIGEGGFGKVY--KGRLESGQLVAIKQLNHEGLQ---GHQEFI 89
F AI + ++ ++G+G FG+V K ++ +GQ A+K ++ ++ + +
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLL 74
Query: 90 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 149
EV +L L H N+ L + LV E G L D + ++ S +
Sbjct: 75 REVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAAR 130
Query: 150 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTHV 206
I G+ Y H +++RDLK N+LL++ D N ++ DFGL+ TH
Sbjct: 131 IIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THF 179
Query: 207 STR-----VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
+GT Y APE + G K D++S GV+L L++G
Sbjct: 180 EASKKXKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 15/198 (7%)
Query: 53 IGEGGFGKVYKGRLESGQ----LVAIKQL-NHEGLQGHQEFIVEVLMLSLLHHDNLVTLI 107
IGEG FG V++G S + VAIK N ++F+ E L + H ++V LI
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 108 GYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANP 167
G T + ++ E +G L L + + L + + A + L YL K
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 128
Query: 168 PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAMSGK 226
++RD+ + N+L+ ++ KL DFGL++ + D+T+ +++ + APE +
Sbjct: 129 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 185
Query: 227 LTLKSDIYSFGVVLLELI 244
T SD++ FGV + E++
Sbjct: 186 FTSASDVWMFGVCMWEIL 203
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + E+G A+K L+ + L+ + + E +L ++
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 38 RELAIATRNFREANLIGEGGFGKVYKGRLESGQ----LVAIKQL-NHEGLQGHQEFIVEV 92
R+ I IGEG FG V++G S + VAIK N ++F+ E
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 93 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 152
L + H ++V LIG T + ++ E +G L L + + L + + A
Sbjct: 443 LTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKFSLDLASLILYAY 498
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-STRVM 211
+ L YL K ++RD+ + N+L+ ++ KL DFGL++ + D+T+ +++
Sbjct: 499 QLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGK 553
Query: 212 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
+ APE + T SD++ FGV + E++
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
L L +V EY P G + HL + EP + +I + EYL
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYL 158
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H +IYRDLK N+++D K++DFG AK V R GT Y A
Sbjct: 159 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 49 EANLIGEGGFGKVYKGRLE-------SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
E +G G FG V KG + + + N L+ E + E ++ L +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNP 88
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
+V +IG C + + +LV E +G L +L + +++ + G++YL
Sbjct: 89 YIVRMIGICEA-ESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYL 143
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAP 219
++N ++RDL + N+LL K+SDFGL+K D + + G + + AP
Sbjct: 144 E-ESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAP 199
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 255
E K + KSD++SFGV++ E + G+K KG
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 236
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 49 EANLIGEGGFGKVYKGRLE-------SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
E +G G FG V KG + + + N L+ E + E ++ L +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNP 88
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
+V +IG C + + +LV E +G L +L + +++ + G++YL
Sbjct: 89 YIVRMIGICEA-ESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYL 143
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAP 219
++N ++RDL + N+LL K+SDFGL+K D + + G + + AP
Sbjct: 144 E-ESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAP 199
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 255
E K + KSD++SFGV++ E + G+K KG
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 236
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + E+G A+K L+ + L+ + + E +L ++
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + R A EYL
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYL 150
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 151 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 199
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + E+G A+K L+ + L+ + + E +L ++
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + +I + EYL
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 159 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 49 EANLIGEGGFGKVYKGRLE-------SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
E +G G FG V KG + + + N L+ E + E ++ L +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNP 72
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
+V +IG C + + +LV E +G L +L + +++ + G++YL
Sbjct: 73 YIVRMIGICEA-ESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYL 127
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAP 219
++RDL + N+LL K+SDFGL+K D + + G + + AP
Sbjct: 128 E---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAP 183
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 255
E K + KSD++SFGV++ E + G+K KG
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 220
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 35/290 (12%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQ----LVAIKQLNHE-GLQGHQEFIVEVL 93
+ IA + ++GEG FG+VY+G + + VA+K + L ++F+ E +
Sbjct: 18 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 77
Query: 94 MLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG 153
++ L H ++V LIG + ++ E P G L +L E ++ L T + ++
Sbjct: 78 IMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQ 133
Query: 154 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
+ + YL + ++RD+ NIL+ + KL DFGL++ D S +
Sbjct: 134 ICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 190
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQK 273
+ +PE + T SD++ F V + E+++ K +PF +
Sbjct: 191 -KWMSPESINFRRFTTASDVWMFAVCMWEILSFGK-----------------QPFFWLEN 232
Query: 274 KFVHLVDPLLHG-RYPRRCLNYAVAVTAM--CLNEEANFRPLINDIVVAL 320
K V + L G R P+ L V T M C + + + RP ++V +L
Sbjct: 233 KDV--IGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 280
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 46 NFREANLIGEGGFGKVYKGRL-ESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLV 104
++ + +IG G FG VY+ +L +SG+LVAIK++ LQ + E+ ++ L H N+V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 80
Query: 105 TL-IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA-------- 155
L + +SG+++ VY + + + + +Y + +R K +
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA------RHYSRAKQTLPVIYVKLYMYQ 134
Query: 156 --RGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVSTRVMG 212
R L Y+H + +RD+K N+LLD D KL DFG AK G+ + +
Sbjct: 135 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXIC 188
Query: 213 TYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGR 247
+ Y APE T D++S G VL EL+ G+
Sbjct: 189 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 49 EANLIGEGGFGKVYKGRLE-------SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
E +G G FG V KG + + + N L+ E + E ++ L +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNP 86
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
+V +IG C + + +LV E +G L +L + +++ + G++YL
Sbjct: 87 YIVRMIGICEA-ESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYL 141
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAP 219
++N ++RDL + N+LL K+SDFGL+K D + + G + + AP
Sbjct: 142 E-ESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAP 197
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 255
E K + KSD++SFGV++ E + G+K KG
Sbjct: 198 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 234
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 35/290 (12%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQ----LVAIKQLNHE-GLQGHQEFIVEVL 93
+ IA + ++GEG FG+VY+G + + VA+K + L ++F+ E +
Sbjct: 6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 65
Query: 94 MLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG 153
++ L H ++V LIG + ++ E P G L +L E ++ L T + ++
Sbjct: 66 IMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQ 121
Query: 154 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
+ + YL + ++RD+ NIL+ + KL DFGL++ D S +
Sbjct: 122 ICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 178
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQK 273
+ +PE + T SD++ F V + E+++ K +PF +
Sbjct: 179 -KWMSPESINFRRFTTASDVWMFAVCMWEILSFGK-----------------QPFFWLEN 220
Query: 274 KFVHLVDPLLHG-RYPRRCLNYAVAVTAM--CLNEEANFRPLINDIVVAL 320
K V + L G R P+ L V T M C + + + RP ++V +L
Sbjct: 221 KDV--IGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 268
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 44 TRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHD 101
+ +F+ +L+GEG +G V + +G++VAIK++ + + E+ +L H+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
N++T+ Y+ ++ L+ + Q LS + R ++ L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM-LSDDHIQYFIYQTLRAVKVL 128
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL--GPVGDNTHVS------TRVMGT 213
H VI+RDLK +N+L++++ + K+ DFGLA++ DN+ + T + T
Sbjct: 129 HGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 214 YGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
Y APE + S K + D++S G +L EL R
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + E+G A+K L+ + L+ + + E +L ++
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + R A EYL
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYL 150
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 151 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 199
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 35/290 (12%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGRLESGQ----LVAIKQLNHE-GLQGHQEFIVEVL 93
+ IA + ++GEG FG+VY+G + + VA+K + L ++F+ E +
Sbjct: 2 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 61
Query: 94 MLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVG 153
++ L H ++V LIG + ++ E P G L +L E ++ L T + ++
Sbjct: 62 IMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQ 117
Query: 154 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
+ + YL + ++RD+ NIL+ + KL DFGL++ D S +
Sbjct: 118 ICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 174
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQK 273
+ +PE + T SD++ F V + E+++ K +PF +
Sbjct: 175 -KWMSPESINFRRFTTASDVWMFAVCMWEILSFGK-----------------QPFFWLEN 216
Query: 274 KFVHLVDPLLHG-RYPRRCLNYAVAVTAM--CLNEEANFRPLINDIVVAL 320
K V + L G R P+ L V T M C + + + RP ++V +L
Sbjct: 217 KDV--IGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 264
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 52 LIGEGGFGKVYK------GRLESGQLVAIKQLNHEGLQGHQ--EFIVEVLMLSLLHHDNL 103
+G+GGF K ++ + +G++V L L+ HQ + +E+ + L H ++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLL----LKPHQREKMSMEISIHRSLAHQHV 83
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
V G+ D +V E SL + + EP + +I +G +YLH
Sbjct: 84 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLHR 139
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM 223
VI+RDLK N+ L+ D K+ DFGLA V + + GT Y APE
Sbjct: 140 NR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLS 194
Query: 224 SGKLTLKSDIYSFGVVLLELITGRKAMDLS 253
+ + D++S G ++ L+ G+ + S
Sbjct: 195 KKGHSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + E+G A+K L+ + L+ + + E +L ++
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+P G + HL + EP + +I + EYL
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 178
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 179 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 227
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 103/247 (41%), Gaps = 52/247 (21%)
Query: 46 NFREANLIGEGGFGKVYKGR--LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD-- 101
+F E ++G+G FG+V K R L+S + AIK++ H + + EV +L+ L+H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDS-RYYAIKKIRHTE-EKLSTILSEVXLLASLNHQYV 64
Query: 102 -----------NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 150
N V + EY +L D ++ +Q+ + ++
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY---WRL 121
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS--- 207
L Y+H + +I+R+LK NI +D N K+ DFGLAK N H S
Sbjct: 122 FRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAK------NVHRSLDI 172
Query: 208 ---------------TRVMGTYGYCAPEY-AMSGKLTLKSDIYSFGVVLLELI----TGR 247
T +GT Y A E +G K D YS G++ E I TG
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGX 232
Query: 248 KAMDLSK 254
+ +++ K
Sbjct: 233 ERVNILK 239
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 49 EANLIGEGGFGKVYKGRLE-------SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
E +G G FG V KG + + + N L+ E + E ++ L +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNP 68
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
+V +IG C + + +LV E +G L +L + +++ + G++YL
Sbjct: 69 YIVRMIGICEA-ESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYL 123
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAP 219
++RDL + N+LL K+SDFGL+K D + + G + + AP
Sbjct: 124 E---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAP 179
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 255
E K + KSD++SFGV++ E + G+K KG
Sbjct: 180 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 216
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 38 RELAIATRNFREANLIGEGGFGKVYKGRLESGQLV-AIKQLNHEGL--QGHQEFIVEVLM 94
R+L + ++ +IG G FG+V R +S + V A+K L+ + + F E
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 95 LSLLHHDNLVTLIGYCTSGDQRL-LVYEYMPMGSLEDHL--YDLEPDQEPLSWNTRMKIA 151
+ + V + Y D+ L +V EYMP G L + + YD+ P++ + + +A
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLA 180
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG----LAKLGPVGDNTHVS 207
+ A + ++H RD+K N+LLD + KL+DFG + K G V +T V
Sbjct: 181 LDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV- 230
Query: 208 TRVMGTYGYCAPEYAMS----GKLTLKSDIYSFGVVLLELITG 246
GT Y +PE S G + D +S GV L E++ G
Sbjct: 231 ----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 52 LIGEGGFGKVYK------GRLESGQLVAIKQLNHEGLQGHQ--EFIVEVLMLSLLHHDNL 103
+G+GGF K ++ + +G++V L L+ HQ + +E+ + L H ++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLL----LKPHQREKMSMEISIHRSLAHQHV 79
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
V G+ D +V E SL + + EP + +I +G +YLH
Sbjct: 80 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLHR 135
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM 223
VI+RDLK N+ L+ D K+ DFGLA V + + GT Y APE
Sbjct: 136 NR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLS 190
Query: 224 SGKLTLKSDIYSFGVVLLELITGRKAMDLS 253
+ + D++S G ++ L+ G+ + S
Sbjct: 191 KKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 49 EANLIGEGGFGKVYKGRLE-------SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
E +G G FG V KG + + + N L+ E + E ++ L +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNP 66
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
+V +IG C + + +LV E +G L +L + +++ + G++YL
Sbjct: 67 YIVRMIGICEA-ESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYL 121
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAP 219
++RDL + N+LL K+SDFGL+K D + + G + + AP
Sbjct: 122 E---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAP 177
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 255
E K + KSD++SFGV++ E + G+K KG
Sbjct: 178 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 214
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 49 EANLIGEGGFGKVYKGRLE-------SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
E +G G FG V KG + + + N L+ E + E ++ L +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNP 78
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
+V +IG C + + +LV E +G L +L + +++ + G++YL
Sbjct: 79 YIVRMIGICEA-ESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYL 133
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAP 219
++RDL + N+LL K+SDFGL+K D + + G + + AP
Sbjct: 134 E---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAP 189
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 255
E K + KSD++SFGV++ E + G+K KG
Sbjct: 190 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 226
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 21/217 (9%)
Query: 49 EANLIGEGGFGKVYKGRLE-------SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
E +G G FG V KG + + + N L+ E + E ++ L +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNP 430
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
+V +IG C + + +LV E +G L +L ++ +++ + G++YL
Sbjct: 431 YIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYL 485
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAP 219
++N ++RDL + N+LL K+SDFGL+K D + + G + + AP
Sbjct: 486 E-ESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAP 541
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 255
E K + KSD++SFGV++ E + G+K KG
Sbjct: 542 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 578
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 52 LIGEGGFGKVYK------GRLESGQLVAIKQLNHEGLQGHQ--EFIVEVLMLSLLHHDNL 103
+G+GGF K ++ + +G++V L L+ HQ + +E+ + L H ++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLL----LKPHQREKMSMEISIHRSLAHQHV 79
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
V G+ D +V E SL + + EP + +I +G +YLH
Sbjct: 80 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLHR 135
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM 223
VI+RDLK N+ L+ D K+ DFGLA V + + GT Y APE
Sbjct: 136 NR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLS 190
Query: 224 SGKLTLKSDIYSFGVVLLELITGRKAMDLS 253
+ + D++S G ++ L+ G+ + S
Sbjct: 191 KKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 34/223 (15%)
Query: 85 HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSW 144
H+E E+ +L L H N++ L LV E+ G L + + + E +
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 145 NTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND---FNPKLSDFGLAKLGPVG 201
N +I G YLH +++RD+K NILL+N N K+ DFGL+
Sbjct: 150 NIMKQILSGIC----YLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF--FS 200
Query: 202 DNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNL 261
+ + R +GT Y APE + K K D++S GV++ L+ G GQ +Q++
Sbjct: 201 KDYKLRDR-LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPFG---GQNDQDI 255
Query: 262 V-------------SWSRPFLKDQKKFVHLVDPLLHGRYPRRC 291
+ W + D+ K L+ +L Y +RC
Sbjct: 256 IKKVEKGKYYFDFNDWKN--ISDEAK--ELIKLMLTYDYNKRC 294
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 21/217 (9%)
Query: 49 EANLIGEGGFGKVYKGRLE-------SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
E +G G FG V KG + + + N L+ E + E ++ L +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNP 431
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
+V +IG C + + +LV E +G L +L ++ +++ + G++YL
Sbjct: 432 YIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYL 486
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAP 219
++N ++RDL + N+LL K+SDFGL+K D + + G + + AP
Sbjct: 487 E-ESN--FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAP 542
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 255
E K + KSD++SFGV++ E + G+K KG
Sbjct: 543 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 579
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 49 EANLIGEGGFGKVYKGRLE-------SGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
E +G G FG V KG + + + N L+ E + E ++ L +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNP 72
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
+V +IG C + + +LV E +G L +L + +++ + G++YL
Sbjct: 73 YIVRMIGICEA-ESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYL 127
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH-VSTRVMGTYGYCAPE 220
++RDL + N+LL K+SDFGL+K +N + T + APE
Sbjct: 128 E---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPE 184
Query: 221 YAMSGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKG 255
K + KSD++SFGV++ E + G+K KG
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 220
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 53 IGEGGFGKVYKGRLE-SGQLVAIKQLNHEGLQG------HQEFIVEVLMLSLLHHDNLVT 105
+G G F V K R + +G+ A K + L +E EV +L + H N++T
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L + +L+ E + G L+D ++E L+ + + G+ YLH K
Sbjct: 94 LHDIFENKTDVVLILELVSGG----ELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKR 149
Query: 166 NPPVIYRDLKSANILL--DNDFNP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
+ + DLK NI+L N NP KL DFG+A G+ + GT + APE
Sbjct: 150 ---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEI 203
Query: 222 AMSGKLTLKSDIYSFGVVLLELITG 246
L L++D++S GV+ L++G
Sbjct: 204 VNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 38 RELAIATRNFREANLIGEGGFGKVYKGRLESGQLV-AIKQLNHEGL--QGHQEFIVEVLM 94
R+L + ++ +IG G FG+V R +S + V A+K L+ + + F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 95 LSLLHHDNLVTLIGYCTSGDQRL-LVYEYMPMGSLEDHL--YDLEPDQEPLSWNTRMKIA 151
+ + V + Y D+ L +V EYMP G L + + YD+ P++ + + +A
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLA 185
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG----LAKLGPVGDNTHVS 207
+ A + ++H RD+K N+LLD + KL+DFG + K G V +T V
Sbjct: 186 LDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV- 235
Query: 208 TRVMGTYGYCAPEYAMS----GKLTLKSDIYSFGVVLLELITG 246
GT Y +PE S G + D +S GV L E++ G
Sbjct: 236 ----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 22/222 (9%)
Query: 38 RELAIATRNFREANLIGEGGFGKVYKGRLESG-QLVAIKQLNH-EGLQGHQEFIVEVLML 95
+++ + +F +IG G FG+V +L++ ++ A+K LN E L+ +
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 96 SLLHHDN-LVTLIGYCTSGDQRL-LVYEYMPMGSLEDHLYDLE---PDQEPLSWNTRMKI 150
L++ D+ +T + Y D L LV +Y G L L E P++ + M I
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVI 186
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
A+ + L Y+H RD+K NIL+D + + +L+DFG + L + D T S+
Sbjct: 187 AIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVA 236
Query: 211 MGTYGYCAPEYAMS-----GKLTLKSDIYSFGVVLLELITGR 247
+GT Y +PE + G+ + D +S GV + E++ G
Sbjct: 237 VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 38 RELAIATRNFREANLIGEGGFGKVYKGRLESGQLV-AIKQLNHEGL--QGHQEFIVEVLM 94
R+L + ++ +IG G FG+V R +S + V A+K L+ + + F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 95 LSLLHHDNLVTLIGYCTSGDQRL-LVYEYMPMGSLEDHL--YDLEPDQEPLSWNTRMKIA 151
+ + V + Y D+ L +V EYMP G L + + YD+ P++ + + +A
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLA 185
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG----LAKLGPVGDNTHVS 207
+ A + ++H RD+K N+LLD + KL+DFG + K G V +T V
Sbjct: 186 LDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV- 235
Query: 208 TRVMGTYGYCAPEYAMS----GKLTLKSDIYSFGVVLLELITG 246
GT Y +PE S G + D +S GV L E++ G
Sbjct: 236 ----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 29/214 (13%)
Query: 46 NFREANLI---GEGGFGKVYKGRLESGQLVA-IKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
+F++ N + E G+++KGR + +V + ++ + ++F E L + H
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 102 NLVTLIGYCTS--GDQRLLVYEYMPMGSLEDHLYD---LEPDQEPLSWNTRMKIAVGAAR 156
N++ ++G C S L+ +MP GSL + L++ DQ + +K A+ AR
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQ-----SQAVKFALDMAR 122
Query: 157 GLEYLHCKANPPVIYRD-LKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 215
G+ +LH P+I R L S ++++D D ++S + V + R M
Sbjct: 123 GMAFLHTLE--PLIPRHALNSRSVMIDEDMTARIS------MADVKFSFQSPGR-MYAPA 173
Query: 216 YCAPEYAMSGKLT----LKSDIYSFGVVLLELIT 245
+ APE A+ K +D++SF V+L EL+T
Sbjct: 174 WVAPE-ALQKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 38 RELAIATRNFREANLIGEGGFGKVYKGRLESGQ----LVAIKQL-NHEGLQGHQEFIVEV 92
R+ I IGEG FG V++G S + VAIK N ++F+ E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 93 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 152
L + H ++V LIG T + ++ E +G L L + + L + + A
Sbjct: 63 LTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKFSLDLASLILYAY 118
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-STRVM 211
+ L YL K ++RD+ + N+L+ KL DFGL++ + D+T+ +++
Sbjct: 119 QLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRY--MEDSTYYKASKGK 173
Query: 212 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
+ APE + T SD++ FGV + E++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 103/222 (46%), Gaps = 27/222 (12%)
Query: 38 RELAIATRNFREANLIGEGGFGKVYKGRLESGQLV-AIKQLNHEGLQGHQE---FIVEVL 93
R L + ++ +IG G FG+V R ++ Q V A+K L+ + + F E
Sbjct: 68 RGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERD 127
Query: 94 MLSLLHHDNLVTLIGYCTSGDQRLL--VYEYMPMGSLEDHL--YDLEPDQEPLSWNTRMK 149
+++ + +V L +C D + L V EYMP G L + + YD+ P W
Sbjct: 128 IMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDV-----PEKWAKFYT 180
Query: 150 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVST 208
V A L+ +H +I+RD+K N+LLD + KL+DFG K+ G H T
Sbjct: 181 AEVVLA--LDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG-MVHCDT 234
Query: 209 RVMGTYGYCAPEYAMS----GKLTLKSDIYSFGVVLLELITG 246
V GT Y +PE S G + D +S GV L E++ G
Sbjct: 235 AV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 17/212 (8%)
Query: 45 RNFREANLIGEGGFGKVYKGR-LESGQLVAIKQL----NHEGLQGHQEFIVEVLMLSLLH 99
+ + + IGEG +G V+K + E+ ++VA+K++ + EG+ + E+ +L L
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA--LREICLLKELK 59
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H N+V L S + LV+E+ L+ + D +P +GL
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDP---EIVKSFLFQLLKGLG 115
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
+ H + V++RDLK N+L++ + KL++FGLA+ G + + T Y P
Sbjct: 116 FCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARA--FGIPVRCYSAEVVTLWYRPP 170
Query: 220 EYAMSGKLTLKS-DIYSFGVVLLELITGRKAM 250
+ KL S D++S G + EL + +
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 39/224 (17%)
Query: 41 AIATRNFREA----NLIGEGGFGKVY--KGRLESGQLVAIKQLNHEGLQGHQEFIVEVLM 94
++ T N R+ ++G G F +V+ K RL +G+L A+K + E+ +
Sbjct: 1 SMQTTNIRKTFIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAV 59
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYD----LEPD-----QEPLSWN 145
L + H+N+VTL S LV + + G L D + + E D Q+ LS
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLS-- 117
Query: 146 TRMKIAVGAARGLEYLHCKANPPVIYRDLKSANIL-LDNDFNPKL--SDFGLAKLGPVGD 202
++YLH +++RDLK N+L L + N K+ +DFGL+K+ G
Sbjct: 118 -----------AVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG- 162
Query: 203 NTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
+ + GT GY APE + D +S GV+ L+ G
Sbjct: 163 ---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 44 TRNFREANLIGEGGFGKVYKGRLE-SGQLVAIKQLN-HEGLQGHQEFIVEVLMLSLLHHD 101
+ +F+ +L+GEG +G V + +G++VAIK++ + + E+ +L H+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
N++T+ Y+ ++ L+ + Q LS + R ++ L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM-LSDDHIQYFIYQTLRAVKVL 128
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL--GPVGDNTHVSTRVMG------T 213
H VI+RDLK +N+L++++ + K+ DFGLA++ DN+ + + G T
Sbjct: 129 HGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 214 YGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
Y APE + S K + D++S G +L EL R
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + +E+G A+K L+ + L+ + + E +L ++
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 38 RELAIATRNFREANLIGEGGFGKVYKGRLESGQ----LVAIKQL-NHEGLQGHQEFIVEV 92
R+ I IGEG FG V++G S + VAIK N ++F+ E
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 93 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 152
L + H ++V LIG T + ++ E +G L L + + L + + A
Sbjct: 443 LTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL---QVRKFSLDLASLILYAY 498
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-STRVM 211
+ L YL K ++RD+ + N+L+ KL DFGL++ + D+T+ +++
Sbjct: 499 QLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRY--MEDSTYYKASKGK 553
Query: 212 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
+ APE + T SD++ FGV + E++
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 109/229 (47%), Gaps = 28/229 (12%)
Query: 33 RSFTFRELAIATRNF----REANL--IGEGGFGKV---YKGRLESGQLVAIKQLNH--EG 81
R F + I F R NL IG G G V Y LE VAIK+L+ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERN--VAIKKLSRPFQN 63
Query: 82 LQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYEYMP-MGSLEDHLYDLEP 137
+ E++++ +++H N++ L+ T S ++ VY M M + + +E
Sbjct: 64 QTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMEL 123
Query: 138 DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL 197
D E +S+ + G+++LH +I+RDLK +NI++ +D K+ DFGLA+
Sbjct: 124 DHERMSY-----LLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 198 GPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
G + ++ V+ Y Y APE + DI+S GV++ E+I G
Sbjct: 176 A--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + E+G A+K L+ + L+ + + E + ++
Sbjct: 43 QFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFP 102
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY P G + HL + EP + +I + EYL
Sbjct: 103 FLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D K++DFG AK V R GT Y A
Sbjct: 159 H---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 109/229 (47%), Gaps = 28/229 (12%)
Query: 33 RSFTFRELAIATRNF----REANL--IGEGGFGKV---YKGRLESGQLVAIKQLNH--EG 81
R F + I F R NL IG G G V Y LE VAIK+L+ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQN 63
Query: 82 LQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYEYMP-MGSLEDHLYDLEP 137
+ E++++ +++H N++ L+ T S ++ VY M M + + +E
Sbjct: 64 QTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMEL 123
Query: 138 DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL 197
D E +S+ + G+++LH +I+RDLK +NI++ +D K+ DFGLA+
Sbjct: 124 DHERMSY-----LLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 198 GPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
G + ++ V+ Y Y APE + DI+S GV++ E+I G
Sbjct: 176 A--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++SG +A+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 119 FT------------PATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 166
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 167 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 218
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ + DI+S G ++ EL+TGR
Sbjct: 219 APEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H +++TLI S LV++ M G L D+L + + LS I +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVS 214
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
+LH +++RDLK NILLD++ +LSDFG + G+ + GT GY AP
Sbjct: 215 FLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAP 268
Query: 220 E---------YAMSGKLTLKSDIYSFGVVLLELITG 246
E + GK + D+++ GV+L L+ G
Sbjct: 269 EILKCSMDETHPGYGK---EVDLWACGVILFTLLAG 301
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 103/237 (43%), Gaps = 24/237 (10%)
Query: 53 IGEGGFGKVYKGR-----LESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVT 105
+G G F V K R LE K+ + +G +E EV +L + H N++T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L + +L+ E + G L +D +E LS G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 166 NPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
+ + DLK NI+L + P KL DFGLA + D + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEI 189
Query: 222 AMSGKLTLKSDIYSFGVVLLELITGRKA-MDLSKGQGEQNLVSWSRPFLKDQKKFVH 277
L L++D++S GV+ L++G + +K + N+ S S F D++ F H
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDF--DEEFFSH 244
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 40/213 (18%)
Query: 53 IGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLI 107
+G G +G V Y RL Q VA+K+L+ + L + E+ +L L H+N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 108 GYCTSGDQRLLVYEYMPMGSLED--HLY--------DLEP--DQEPLSWNTRMKIAVGAA 155
T P S+ED +Y DL + LS +
Sbjct: 94 DVFT------------PATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLL 141
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 215
RGL+Y+H +I+RDLK +N+ ++ D ++ DFGLA+ +V+TR
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W 193
Query: 216 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
Y APE ++ DI+S G ++ EL+ G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 43 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 159 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLAGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 103/237 (43%), Gaps = 24/237 (10%)
Query: 53 IGEGGFGKVYKGR-----LESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVT 105
+G G F V K R LE K+ + +G +E EV +L + H N++T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L + +L+ E + G L +D +E LS G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 166 NPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
+ + DLK NI+L + P KL DFGLA + D + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEI 189
Query: 222 AMSGKLTLKSDIYSFGVVLLELITGRKA-MDLSKGQGEQNLVSWSRPFLKDQKKFVH 277
L L++D++S GV+ L++G + +K + N+ S S F D++ F H
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDF--DEEFFSH 244
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLXGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 33/214 (15%)
Query: 47 FREANLIGEGGFGKVYKGRLESGQLV-AIKQLNHEGLQ--GHQEFIVEVLMLSLLHHDNL 103
++ +G G +G+V R + + AIK + + + + + EV +L LL H N+
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI-AVGAA------- 155
+ L + LV E G L D + RMK V AA
Sbjct: 99 MKLYDFFEDKRNYYLVMECYKGGELFDEII------------HRMKFNEVDAAVIIKQVL 146
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTHVSTRVMG 212
G+ YLH K N +++RDLK N+LL++ D K+ DFGL+ V +N +G
Sbjct: 147 SGVTYLH-KHN--IVHRDLKPENLLLESKEKDALIKIVDFGLS---AVFENQKKMKERLG 200
Query: 213 TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
T Y APE + K K D++S GV+L L+ G
Sbjct: 201 TAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 29 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 88
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + R A EYL
Sbjct: 89 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYL 144
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 145 H---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 193
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 16/205 (7%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 178
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
H + +IYRDLK N+L+D +++DFG AK T + GT Y APE
Sbjct: 179 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT-----LCGTPEYLAPEI 230
Query: 222 AMSGKLTLKSDIYSFGVVLLELITG 246
+S D ++ GV++ E+ G
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 103/237 (43%), Gaps = 24/237 (10%)
Query: 53 IGEGGFGKVYKGR-----LESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVT 105
+G G F V K R LE K+ + +G +E EV +L + H N++T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L + +L+ E + G L +D +E LS G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 166 NPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
+ + DLK NI+L + P KL DFGLA + D + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEI 189
Query: 222 AMSGKLTLKSDIYSFGVVLLELITGRKA-MDLSKGQGEQNLVSWSRPFLKDQKKFVH 277
L L++D++S GV+ L++G + +K + N+ S S F D++ F H
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDF--DEEFFSH 244
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYL 178
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 179 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 227
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 37 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 96
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + R A EYL
Sbjct: 97 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYL 152
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 153 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 201
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 86 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 185
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 28/220 (12%)
Query: 38 RELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSL 97
RE+A + +IG G FG V++ +L VAIK++ LQ + E+ ++ +
Sbjct: 38 REIA-----YTNCKVIGNGSFGVVFQAKLVESDEVAIKKV----LQDKRFKNRELQIMRI 88
Query: 98 LHHDNLVTLIGYC-TSGDQR-----LLVYEYMP--MGSLEDHLYDLEPDQEPLSWNTRMK 149
+ H N+V L + ++GD++ LV EY+P + H L+ L M
Sbjct: 89 VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM- 147
Query: 150 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP-KLSDFGLAKLGPVGDNTHVST 208
R L Y+H + +RD+K N+LLD KL DFG AK+ G+ +
Sbjct: 148 --YQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP---NV 199
Query: 209 RVMGTYGYCAPEYAM-SGKLTLKSDIYSFGVVLLELITGR 247
+ + Y APE + T DI+S G V+ EL+ G+
Sbjct: 200 SXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 100 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 147
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 148 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 199
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 200 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 40/213 (18%)
Query: 53 IGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLI 107
+G G +G V Y RL Q VA+K+L+ + L + E+ +L L H+N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 108 GYCTSGDQRLLVYEYMPMGSLED--HLY--------DLEP--DQEPLSWNTRMKIAVGAA 155
T P S+ED +Y DL + LS +
Sbjct: 86 DVFT------------PATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL 133
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 215
RGL+Y+H +I+RDLK +N+ ++ D ++ DFGLA+ +V+TR
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----W 185
Query: 216 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
Y APE ++ DI+S G ++ EL+ G+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 96 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 195
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 53 IGEGGFGKVYKGR-----LESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVT 105
+G G F V K R LE K+ + +G +E EV +L + H N++T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L + +L+ E + G L+D +E LS G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGG----ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 166 NPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
+ + DLK NI+L + P KL DFGLA + D + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEI 189
Query: 222 AMSGKLTLKSDIYSFGVVLLELITG 246
L L++D++S GV+ L++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 110 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 158 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 209
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 109 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 157 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 208
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+++D +++DFG AK V R GT Y A
Sbjct: 158 H---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ E+ G
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 190 APEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
IG G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 95 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYR 194
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 40/213 (18%)
Query: 53 IGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLI 107
+G G +G V Y RL Q VA+K+L+ + L + E+ +L L H+N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 108 GYCTSGDQRLLVYEYMPMGSLED--HLY--------DLEP--DQEPLSWNTRMKIAVGAA 155
T P S+ED +Y DL + LS +
Sbjct: 94 DVFT------------PATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL 141
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 215
RGL+Y+H +I+RDLK +N+ ++ D ++ DFGLA+ +V+TR
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W 193
Query: 216 YCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
Y APE ++ DI+S G ++ EL+ G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 28/229 (12%)
Query: 33 RSFTFRELAIATRNF----REANL--IGEGGFGKV---YKGRLESGQLVAIKQLNH--EG 81
R F + I F R NL IG G G V Y LE VAIK+L+ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQN 63
Query: 82 LQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYEYMP-MGSLEDHLYDLEP 137
+ E++++ +++H N++ L+ T S ++ VY M M + + +E
Sbjct: 64 QTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMEL 123
Query: 138 DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL 197
D E +S+ + G+++LH +I+RDLK +NI++ +D K+ DFGLA+
Sbjct: 124 DHERMSY-----LLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 198 GPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
G + ++ V+ Y Y APE + DI+S G ++ E+I G
Sbjct: 176 A--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE +S D ++ GV++ ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 28/229 (12%)
Query: 33 RSFTFRELAIATRNF----REANL--IGEGGFGKV---YKGRLESGQLVAIKQLNH--EG 81
R F + I F R NL IG G G V Y LE VAIK+L+ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQN 63
Query: 82 LQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYEYMP-MGSLEDHLYDLEP 137
+ E++++ +++H N++ L+ T S ++ VY M M + + +E
Sbjct: 64 QTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMEL 123
Query: 138 DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL 197
D E +S+ + G+++LH +I+RDLK +NI++ +D K+ DFGLA+
Sbjct: 124 DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 198 GPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
G + ++ V+ Y Y APE + DI+S G ++ E+I G
Sbjct: 176 A--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 53 IGEGGFGKVYKGR-----LESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVT 105
+G G F V K R LE K+ + +G +E EV +L + H N++T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L + +L+ E + G L +D +E LS G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 166 NPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
+ + DLK NI+L + P KL DFGLA + D + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEI 189
Query: 222 AMSGKLTLKSDIYSFGVVLLELITG 246
L L++D++S GV+ L++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 53 IGEGGFGKVYKGR-----LESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVT 105
+G G F V K R LE K+ + +G +E EV +L + H N++T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L + +L+ E + G L +D +E LS G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 166 NPPVIYRDLKSANILLDNDFNP----KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
+ + DLK NI+L + P KL DFGLA + D + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEI 189
Query: 222 AMSGKLTLKSDIYSFGVVLLELITG 246
L L++D++S GV+ L++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEYM-PMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E M P+ L D + + QE L+ + ++ + A
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV-LEAV 127
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 128 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 177
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 97 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYR 196
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 42/214 (19%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 86 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TY 214
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ H + G T
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVATR 182
Query: 215 GYCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 97 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYR 196
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 97 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYR 196
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 42/214 (19%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TY 214
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ H + G T
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVATR 186
Query: 215 GYCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + L+ + + RG
Sbjct: 86 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRG 133
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 185
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 42/214 (19%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TY 214
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ H + G T
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVATR 186
Query: 215 GYCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 95 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYR 194
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 86 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 185
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGY 109
IG+G F V + +L +G A K +N + L HQ+ E + LL H N+V L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 110 CTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 169
+ LV++ + G L + + E E + + +I LHC V
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV------LHCH-QMGV 124
Query: 170 IYRDLKSANILLDNDFNP---KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK 226
++RDLK N+LL + KL+DFGLA V + GT GY +PE
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRKEA 182
Query: 227 LTLKSDIYSFGVVLLELITG 246
DI++ GV+L L+ G
Sbjct: 183 YGKPVDIWACGVILYILLVG 202
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 87 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 135 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 186
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 28/229 (12%)
Query: 33 RSFTFRELAIATRNF----REANL--IGEGGFGKV---YKGRLESGQLVAIKQLNH--EG 81
R F + I F R NL IG G G V Y LE VAIK+L+ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQN 63
Query: 82 LQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYEYMP-MGSLEDHLYDLEP 137
+ E++++ ++H N++ L+ T S ++ VY M M + + +E
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMEL 123
Query: 138 DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL 197
D E +S+ + G+++LH +I+RDLK +NI++ +D K+ DFGLA+
Sbjct: 124 DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 198 GPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
G + ++ V+ Y Y APE + DI+S G ++ E+I G
Sbjct: 176 A--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 95 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 194
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 101 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 149 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYR 200
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 42/214 (19%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 110 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TY 214
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ H + G T
Sbjct: 158 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMXGXVATR 206
Query: 215 GYCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 87 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 135 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 186
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 97 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 145 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 196
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 95 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 194
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 89 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 136
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 137 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 188
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 189 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 28/229 (12%)
Query: 33 RSFTFRELAIATRNF----REANL--IGEGGFGKV---YKGRLESGQLVAIKQLNH--EG 81
R F + I F R NL IG G G V Y LE VAIK+L+ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQN 63
Query: 82 LQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYEYMP-MGSLEDHLYDLEP 137
+ E++++ ++H N++ L+ T S ++ VY M M + + +E
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMEL 123
Query: 138 DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL 197
D E +S+ + G+++LH +I+RDLK +NI++ +D K+ DFGLA+
Sbjct: 124 DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 198 GPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
G + ++ V+ Y Y APE + DI+S G ++ E+I G
Sbjct: 176 A--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 102 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 150 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 201
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 102 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 150 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 201
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 28/229 (12%)
Query: 33 RSFTFRELAIATRNF----REANL--IGEGGFGKV---YKGRLESGQLVAIKQLNH--EG 81
R F + I F R NL IG G G V Y LE VAIK+L+ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQN 63
Query: 82 LQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYEYMP-MGSLEDHLYDLEP 137
+ E++++ ++H N++ L+ T S ++ VY M M + + +E
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL 123
Query: 138 DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL 197
D E +S+ + G+++LH +I+RDLK +NI++ +D K+ DFGLA+
Sbjct: 124 DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 198 GPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
G + ++ V+ Y Y APE + DI+S G ++ E+I G
Sbjct: 176 A--GTSFMMTPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 47/286 (16%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEFIVEV---LMLSLLH-- 99
+R L+G+GGFG V+ G RL VAIK + + G V L ++LL
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 100 -----HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGA 154
H ++ L+ + + + +LV E P+ + + L+D ++ PL
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLE-RPLPAQD--LFDYITEKGPLGEGPSRCFFGQV 148
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
+++ H + V++RD+K NIL+D KL DFG L + D + T GT
Sbjct: 149 VAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGAL--LHDEPY--TDFDGT 201
Query: 214 YGYCAPEYAMSGKL-TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQ 272
Y PE+ + L + ++S G++L +++ G PF +DQ
Sbjct: 202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVCG------------------DIPFERDQ 243
Query: 273 KKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVV 318
+ +++ LH +P A+ CL + + RP + +I++
Sbjct: 244 E----ILEAELH--FPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 101 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 149 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 200
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 88 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 135
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 136 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 187
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 92 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 140 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 191
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 96 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 195
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 92 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 140 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 191
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 92 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 140 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 191
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 102 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 150 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 201
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 96 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 195
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 96 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYR 195
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 113 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 161 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 212
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 22/222 (9%)
Query: 38 RELAIATRNFREANLIGEGGFGKVYKGRLESGQLV-AIKQLNH-EGLQGHQEFIVEVLML 95
+E+ + +F +IG G FG+V ++++ + + A+K LN E L+ +
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 96 SLLHHD-NLVTLIGYCTSGDQRL-LVYEYMPMGSLEDHLYDLE---PDQEPLSWNTRMKI 150
L++ D +T + Y + L LV +Y G L L E P+ + M +
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 186
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
A+ + L Y+H RD+K N+LLD + + +L+DFG + L D T S+
Sbjct: 187 AIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVA 236
Query: 211 MGTYGYCAPEYAMS-----GKLTLKSDIYSFGVVLLELITGR 247
+GT Y +PE + GK + D +S GV + E++ G
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 27/217 (12%)
Query: 41 AIATRNFREANLIGEGGFGKVYKG-RLESGQLVAIKQL----NHEGLQGHQEFIVEVLML 95
A + +R +GEG +G+VYK + + VAIK++ EG+ G I EV +L
Sbjct: 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA--IREVSLL 87
Query: 96 SLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
L H N++ L + L++EY L+ ++ D PD +S
Sbjct: 88 KELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYM-DKNPD---VSMRVIKSFLYQLI 142
Query: 156 RGLEYLHCKANPPVIYRDLKSANILL---DNDFNP--KLSDFGLAKLG--PVGDNTHVST 208
G+ + H + ++RDLK N+LL D P K+ DFGLA+ P+ TH
Sbjct: 143 NGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTH--- 196
Query: 209 RVMGTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELI 244
+ T Y PE + + + DI+S + E++
Sbjct: 197 -EIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 109 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 157 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 208
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 110 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 158 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 209
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 92 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 140 LKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYR 191
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 22/222 (9%)
Query: 38 RELAIATRNFREANLIGEGGFGKVYKGRLESGQLV-AIKQLNH-EGLQGHQEFIVEVLML 95
+E+ + +F +IG G FG+V ++++ + + A+K LN E L+ +
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 96 SLLHHD-NLVTLIGYCTSGDQRL-LVYEYMPMGSLEDHLYDLE---PDQEPLSWNTRMKI 150
L++ D +T + Y + L LV +Y G L L E P+ + M +
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 202
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
A+ + L Y+H RD+K N+LLD + + +L+DFG + L D T S+
Sbjct: 203 AIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVA 252
Query: 211 MGTYGYCAPEYAMS-----GKLTLKSDIYSFGVVLLELITGR 247
+GT Y +PE + GK + D +S GV + E++ G
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 113 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ +V+TR Y
Sbjct: 161 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WYR 212
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCA 218
H + +IYRDLK N+L+D +++DFG AK V R GT Y A
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
P +S D ++ GV++ E+ G
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 110/230 (47%), Gaps = 25/230 (10%)
Query: 45 RNFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHD 101
+ +++ IG G G V G VA+K+L+ + + E+++L ++H
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK 81
Query: 102 NLVTLIGYCTSGDQRLLVYE--YMPMGSLEDHLYD---LEPDQEPLSWNTRMKIAVGAAR 156
N+++L+ T + L ++ Y+ M ++ +L +E D E +S+ +
Sbjct: 82 NIISLLNVFTP-QKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLC----- 135
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+++LH +I+RDLK +NI++ +D K+ DFGLA+ N ++ V+ Y Y
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--STNFMMTPYVVTRY-Y 189
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSR 266
APE + DI+S G ++ EL+ G QG ++ W++
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKGSVIF-----QGTDHIDQWNK 234
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 42/214 (19%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG---TY 214
L+Y+H + +I+RDLK +N+ ++ D K+ DFGLA+ H + G T
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGXVATR 186
Query: 215 GYCAPEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
Y APE ++ DI+S G ++ EL+TGR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGY 109
+G+G F V + ++ +GQ A K +N + L HQ+ E + LL H N+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 110 CTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL-HCKANPP 168
+ LV++ + G L + + E E + + +I LE + HC N
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI-------LESVNHCHLNG- 123
Query: 169 VIYRDLKSANILLDNDFNP---KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG 225
+++RDLK N+LL + KL+DFGLA V + GT GY +PE
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 226 KLTLKSDIYSFGVVLLELITG 246
D+++ GV+L L+ G
Sbjct: 182 PYGKPVDMWACGVILYILLVG 202
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGY 109
+G+G F V + ++ +GQ A K +N + L HQ+ E + LL H N+V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 110 CTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 169
+ L+++ + G L + + E E + + +I LHC V
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV------LHCH-QMGV 142
Query: 170 IYRDLKSANILLDNDFNP---KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK 226
++RDLK N+LL + KL+DFGLA V GT GY +PE
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 227 LTLKSDIYSFGVVLLELITG 246
D+++ GV+L L+ G
Sbjct: 201 YGKPVDLWACGVILYILLVG 220
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHHDNLVTLIGY 109
+G+G F V + ++ +GQ A K +N + L HQ+ E + LL H N+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 110 CTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL-HCKANPP 168
+ LV++ + G L + + E E + + +I LE + HC N
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI-------LESVNHCHLNG- 123
Query: 169 VIYRDLKSANILLDNDFNP---KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG 225
+++RDLK N+LL + KL+DFGLA V + GT GY +PE
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 226 KLTLKSDIYSFGVVLLELITG 246
D+++ GV+L L+ G
Sbjct: 182 PYGKPVDMWACGVILYILLVG 202
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 24/157 (15%)
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H N++ L + LV++ M G L D+L ++ LS KI +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 138
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCA 218
LH K N +++RDLK NILLD+D N KL+DFG + +L P G+ V GT Y A
Sbjct: 139 ALH-KLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLR---EVCGTPSYLA 191
Query: 219 PE---------YAMSGKLTLKSDIYSFGVVLLELITG 246
PE + GK + D++S GV++ L+ G
Sbjct: 192 PEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAG 225
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 28/229 (12%)
Query: 33 RSFTFRELAIATRNF----REANL--IGEGGFGKV---YKGRLESGQLVAIKQLNH--EG 81
R F + I F R NL IG G G V Y LE VAIK+L+ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQN 63
Query: 82 LQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYEYMP-MGSLEDHLYDLEP 137
+ E++++ ++H N++ L+ T S ++ VY M M + + +E
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL 123
Query: 138 DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL 197
D E +S+ + G+++LH +I+RDLK +NI++ +D K+ DFGLA+
Sbjct: 124 DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 198 GPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
G + ++ V+ Y Y APE + DI+S G ++ E+I G
Sbjct: 176 A--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 24/157 (15%)
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H N++ L + LV++ M G L D+L ++ LS KI +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 125
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCA 218
LH K N +++RDLK NILLD+D N KL+DFG + +L P G+ V GT Y A
Sbjct: 126 ALH-KLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLR---EVCGTPSYLA 178
Query: 219 PE---------YAMSGKLTLKSDIYSFGVVLLELITG 246
PE + GK + D++S GV++ L+ G
Sbjct: 179 PEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAG 212
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 28/229 (12%)
Query: 33 RSFTFRELAIATRNF----REANL--IGEGGFGKV---YKGRLESGQLVAIKQLNH--EG 81
R F + I F R NL IG G G V Y LE VAIK+L+ +
Sbjct: 7 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQN 64
Query: 82 LQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYEYMP-MGSLEDHLYDLEP 137
+ E++++ ++H N++ L+ T S ++ VY M M + + +E
Sbjct: 65 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL 124
Query: 138 DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL 197
D E +S+ + G+++LH +I+RDLK +NI++ +D K+ DFGLA+
Sbjct: 125 DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 176
Query: 198 GPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
G + ++ V+ Y Y APE + DI+S G ++ E+I G
Sbjct: 177 A--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 28/229 (12%)
Query: 33 RSFTFRELAIATRNF----REANL--IGEGGFGKV---YKGRLESGQLVAIKQLNH--EG 81
R F + I F R NL IG G G V Y LE VAIK+L+ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQN 63
Query: 82 LQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYEYMP-MGSLEDHLYDLEP 137
+ E++++ ++H N++ L+ T S ++ VY M M + + +E
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL 123
Query: 138 DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL 197
D E +S+ + G+++LH +I+RDLK +NI++ +D K+ DFGLA+
Sbjct: 124 DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 198 GPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
G + ++ V+ Y Y APE + DI+S G ++ E+I G
Sbjct: 176 A--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ D+GLA+ +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WYR 189
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 24/157 (15%)
Query: 100 HDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLE 159
H N++ L + LV++ M G L D+L ++ LS KI +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 138
Query: 160 YLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCA 218
LH K N +++RDLK NILLD+D N KL+DFG + +L P G+ V GT Y A
Sbjct: 139 ALH-KLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLR---SVCGTPSYLA 191
Query: 219 PE---------YAMSGKLTLKSDIYSFGVVLLELITG 246
PE + GK + D++S GV++ L+ G
Sbjct: 192 PEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAG 225
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 30/212 (14%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEG---LQGHQEFIVEVLMLSLLHHD 101
F +G G FG+V + ESG A+K L+ + L+ + + E +L ++
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 102 NLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
LV L +V EY+ G + HL + EP + +I + EYL
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMG-TYGYC--- 217
H + +IYRDLK N+L+D +++DFG AK RV G T+ C
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------------RVKGRTWXLCGTP 202
Query: 218 ---APEYAMSGKLTLKSDIYSFGVVLLELITG 246
APE +S D ++ GV++ E+ G
Sbjct: 203 EALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 110/230 (47%), Gaps = 25/230 (10%)
Query: 45 RNFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHD 101
+ +++ IG G G V G VA+K+L+ + + E+++L ++H
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK 83
Query: 102 NLVTLIGYCTSGDQRLLVYE--YMPMGSLEDHLYD---LEPDQEPLSWNTRMKIAVGAAR 156
N+++L+ T + L ++ Y+ M ++ +L +E D E +S+ +
Sbjct: 84 NIISLLNVFTP-QKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLC----- 137
Query: 157 GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 216
G+++LH +I+RDLK +NI++ +D K+ DFGLA+ N ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--CTNFMMTPYVVTRY-Y 191
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSR 266
APE + DI+S G ++ EL+ G QG ++ W++
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKGCVIF-----QGTDHIDQWNK 236
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 123
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 124 R-----HCH-NXGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 173
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 34/205 (16%)
Query: 66 LESGQLVAIKQLNHE--GLQGHQEFIV------------------EVLMLSLLHHDNLVT 105
L SGQ +K+ + GLQ +FI EV +L + H N++T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L + +L+ E + G L+D ++E L+ + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 166 NPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
+ + + DLK NI+L + PK + DFGLA G+ + GT + APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPAFVAPEI 188
Query: 222 AMSGKLTLKSDIYSFGVVLLELITG 246
L L++D++S GV+ L++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 128
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 129 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 178
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 155
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 156 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 205
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 155
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 156 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 205
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 23/207 (11%)
Query: 52 LIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLLHH--DN 102
L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 103 LVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYL 161
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A R
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVR----- 127
Query: 162 HCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 220
HC N V++RD+K NIL+D N KL DFG L + D V T GT Y PE
Sbjct: 128 HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 182
Query: 221 YAMSGKLTLKS-DIYSFGVVLLELITG 246
+ + +S ++S G++L +++ G
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 156
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 157 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 206
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 123
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 124 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 173
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 155
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 156 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 205
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 156
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 157 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 206
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DFGL + +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WYR 189
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 170
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 171 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 220
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 175
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 176 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 225
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 226 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 128
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 129 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 178
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 22/213 (10%)
Query: 49 EANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH-HDNLVTL 106
+ +++GEG +V L + Q A+K + + EV ML H N++ L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 107 IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKAN 166
I + D+ LV+E M GS+ H++ E + + A L++LH N
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEA----SVVVQDVASALDFLH---N 129
Query: 167 PPVIYRDLKSANILLD--NDFNP-KLSDFGLAK-LGPVGDNTHVSTRVM----GTYGYCA 218
+ +RDLK NIL + N +P K+ DFGL + GD + +ST + G+ Y A
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 219 PEY--AMSGKLTL---KSDIYSFGVVLLELITG 246
PE A S + ++ + D++S GV+L L++G
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 156
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 157 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 206
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 123
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 124 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 173
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 170
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 171 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 220
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ DF LA+ +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WYR 189
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 45 RNFREANLIGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLH 99
+ ++ IG G G V Y L+ VAIK+L+ + + E++++ ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 100 HDNLVTLIGYCTSGDQRLL-----VYEYMP-MGSLEDHLYDLEPDQEPLSWNTRMKIAVG 153
H N+++L+ T Q+ L VY M M + + +E D E +S+ +
Sbjct: 82 HKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-----LLYQ 134
Query: 154 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
G+++LH +I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+
Sbjct: 135 MLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTR 189
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
Y Y APE + DI+S G ++ E++
Sbjct: 190 Y-YRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 127
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 128 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 177
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 142
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 143 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 192
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 155
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 156 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 205
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 53 IGEGGFGKVYK-GRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G FG V++ +G A K + + E+ +S+L H LV L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ +++YE+M G L + + D + +S + ++ +GL ++H ++
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVH 172
Query: 172 RDLKSANILLDNDFNP--KLSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT 228
DLK NI+ + KL DFGL A L P + V+T GT + APE A +
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDP-KQSVKVTT---GTAEFAAPEVAEGKPVG 228
Query: 229 LKSDIYSFGVVLLELITG 246
+D++S GV+ L++G
Sbjct: 229 YYTDMWSVGVLSYILLSG 246
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 143
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 144 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 193
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 45 RNFREANLIGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLH 99
+ ++ IG G G V Y L+ VAIK+L+ + + E++++ ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 100 HDNLVTLIGYCTSGDQRLL-----VYEYMP-MGSLEDHLYDLEPDQEPLSWNTRMKIAVG 153
H N+++L+ T Q+ L VY M M + + +E D E +S+ +
Sbjct: 82 HKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-----LLYQ 134
Query: 154 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
G+++LH +I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+
Sbjct: 135 MLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTR 189
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
Y Y APE + DI+S G ++ E++
Sbjct: 190 Y-YRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 156
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 157 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 206
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 29/241 (12%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTL----- 106
+G GG G V+ + + VAIK++ Q + + E+ ++ L HDN+V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 107 ---------IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARG 157
+G T + +V EYM E L ++ +Q PL RG
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-----ETDLANVL-EQGPLLEEHARLFMYQLLRG 132
Query: 158 LEYLHCKANPPVIYRDLKSANILLDN-DFNPKLSDFGLAK-LGP-VGDNTHVSTRVMGTY 214
L+Y+H AN V++RDLK AN+ ++ D K+ DFGLA+ + P H+S ++ T
Sbjct: 133 LKYIHS-AN--VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TK 188
Query: 215 GYCAPEYAMS-GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQK 273
Y +P +S T D+++ G + E++TG+ + + L+ S P + ++
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED 248
Query: 274 K 274
+
Sbjct: 249 R 249
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 143
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 144 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 193
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 45 RNFREANLIGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLH 99
+ ++ IG G G V Y L+ VAIK+L+ + + E++++ ++
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 74
Query: 100 HDNLVTLIGYCTSGDQRLL-----VYEYMP-MGSLEDHLYDLEPDQEPLSWNTRMKIAVG 153
H N+++L+ T Q+ L VY M M + + +E D E +S+ +
Sbjct: 75 HKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-----LLYQ 127
Query: 154 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
G+++LH +I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+
Sbjct: 128 MLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTR 182
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
Y Y APE + DI+S G ++ E++
Sbjct: 183 Y-YRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 142
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 143 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 192
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 162
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 163 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 212
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 213 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 128
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 129 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 178
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 143
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 144 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 193
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEF------IVEVLMLSLL 98
++ L+G GGFG VY G R+ VAIK + + + E +EV++L +
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 99 HH--DNLVTLIGYCTSGDQRLLVYEY-MPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ L+ + D +L+ E P+ L D + + QE L+ + ++ + A
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAV 150
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
R HC N V++RD+K NIL+D N KL DFG L + D V T GT
Sbjct: 151 R-----HCH-NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL--LKDT--VYTDFDGTR 200
Query: 215 GYCAPEYAMSGKLTLKS-DIYSFGVVLLELITG 246
Y PE+ + +S ++S G++L +++ G
Sbjct: 201 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 33 RSFTFRELAIATRNF----REANL--IGEGGFGKV---YKGRLESGQLVAIKQLNH--EG 81
R F + I F R NL IG G G V Y LE VAIK+L+ +
Sbjct: 8 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQN 65
Query: 82 LQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYEYMP-MGSLEDHLYDLEP 137
+ E++++ ++H N++ L+ T S ++ VY M M + + +E
Sbjct: 66 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL 125
Query: 138 DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL 197
D E +S+ + G+++LH +I+RDLK +NI++ +D K+ DFGLA+
Sbjct: 126 DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 177
Query: 198 GPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
G + + V+ Y Y APE + DI+S G ++ E+I G
Sbjct: 178 A--GTSFMMVPFVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 53 IGEGGFGKVYK-GRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G FG V++ +G A K + + E+ +S+L H LV L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIY 171
++ +++YE+M G L + + D + +S + ++ +GL ++H ++
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVH 278
Query: 172 RDLKSANILLDNDFNP--KLSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT 228
DLK NI+ + KL DFGL A L P + V+T GT + APE A +
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDP-KQSVKVTT---GTAEFAAPEVAEGKPVG 334
Query: 229 LKSDIYSFGVVLLELITG 246
+D++S GV+ L++G
Sbjct: 335 YYTDMWSVGVLSYILLSG 352
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 34/205 (16%)
Query: 66 LESGQLVAIKQLNHE--GLQGHQEFIV------------------EVLMLSLLHHDNLVT 105
L SGQ +K+ + GLQ +FI EV +L + H N++T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L + +L+ E + G L+D ++E L+ + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 166 NPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
+ + DLK NI+L + PK + DFGLA G+ + GT + APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 222 AMSGKLTLKSDIYSFGVVLLELITG 246
L L++D++S GV+ L++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 34/206 (16%)
Query: 65 RLESGQLVAIKQLNHE--GLQGHQEFIV------------------EVLMLSLLHHDNLV 104
L SGQ +K+ + GLQ +FI EV +L + H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
TL + +L+ E + G L+D ++E L+ + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 165 ANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 220
+ + DLK NI+L + PK + DFGLA G+ + GT + APE
Sbjct: 134 Q---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE 187
Query: 221 YAMSGKLTLKSDIYSFGVVLLELITG 246
L L++D++S GV+ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 34/205 (16%)
Query: 66 LESGQLVAIKQLNHE--GLQGHQEFIV------------------EVLMLSLLHHDNLVT 105
L SGQ +K+ + GLQ +FI EV +L + H N++T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L + +L+ E + G L+D ++E L+ + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 166 NPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
+ + + DLK NI+L + PK + DFGLA G+ + GT + APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 222 AMSGKLTLKSDIYSFGVVLLELITG 246
L L++D++S GV+ L++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 34/206 (16%)
Query: 65 RLESGQLVAIKQLNHE--GLQGHQEFIV------------------EVLMLSLLHHDNLV 104
L SGQ +K+ + GLQ +FI EV +L + H N++
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
TL + +L+ E + G L+D ++E L+ + G+ YLH
Sbjct: 77 TLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 132
Query: 165 ANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 220
+ + DLK NI+L + PK + DFGLA G+ + GT + APE
Sbjct: 133 Q---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE 186
Query: 221 YAMSGKLTLKSDIYSFGVVLLELITG 246
L L++D++S GV+ L++G
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 34/206 (16%)
Query: 65 RLESGQLVAIKQLNHE--GLQGHQEFIV------------------EVLMLSLLHHDNLV 104
L SGQ +K+ + GLQ +FI EV +L + H N++
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
TL + +L+ E + G L+D ++E L+ + G+ YLH
Sbjct: 77 TLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 132
Query: 165 ANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 220
+ + DLK NI+L + PK + DFGLA G+ + GT + APE
Sbjct: 133 Q---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE 186
Query: 221 YAMSGKLTLKSDIYSFGVVLLELITG 246
L L++D++S GV+ L++G
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 34/206 (16%)
Query: 65 RLESGQLVAIKQLNHE--GLQGHQEFIV------------------EVLMLSLLHHDNLV 104
L SGQ +K+ + GLQ +FI EV +L + H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
TL + +L+ E + G L+D ++E L+ + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 165 ANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 220
+ + DLK NI+L + PK + DFGLA G+ + GT + APE
Sbjct: 134 Q---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE 187
Query: 221 YAMSGKLTLKSDIYSFGVVLLELITG 246
L L++D++S GV+ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 34/206 (16%)
Query: 65 RLESGQLVAIKQLNHE--GLQGHQEFIV------------------EVLMLSLLHHDNLV 104
L SGQ +K+ + GLQ +FI EV +L + H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
TL + +L+ E + G L+D ++E L+ + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 165 ANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 220
+ + DLK NI+L + PK + DFGLA G+ + GT + APE
Sbjct: 134 Q---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE 187
Query: 221 YAMSGKLTLKSDIYSFGVVLLELITG 246
L L++D++S GV+ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 34/205 (16%)
Query: 66 LESGQLVAIKQLNHE--GLQGHQEFIV------------------EVLMLSLLHHDNLVT 105
L SGQ +K+ + GLQ +FI EV +L + H N++T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 106 LIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKA 165
L + +L+ E + G L+D ++E L+ + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 166 NPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
+ + DLK NI+L + PK + DFGLA G+ + GT + APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 222 AMSGKLTLKSDIYSFGVVLLELITG 246
L L++D++S GV+ L++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 34/206 (16%)
Query: 65 RLESGQLVAIKQLNHE--GLQGHQEFIV------------------EVLMLSLLHHDNLV 104
L SGQ +K+ + GLQ +FI EV +L + H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
TL + +L+ E + G L+D ++E L+ + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 165 ANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 220
+ + DLK NI+L + PK + DFGLA G+ + GT + APE
Sbjct: 134 Q---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE 187
Query: 221 YAMSGKLTLKSDIYSFGVVLLELITG 246
L L++D++S GV+ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 93 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 152
++L H N++TL G +V E M G L D + Q+ S +
Sbjct: 68 ILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILR----QKFFSEREASAVLF 123
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANIL-LDNDFNP---KLSDFGLAKLGPVGDNTHVST 208
+ +EYLH + V++RDLK +NIL +D NP ++ DFG AK +N + T
Sbjct: 124 TITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK-QLRAENGLLMT 179
Query: 209 RVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
T + APE DI+S GV+L ++TG
Sbjct: 180 PCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 45 RNFREANLIGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLH 99
+ ++ IG G G V Y L+ VAIK+L+ + + E++++ ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 100 HDNLVTLIGYCTSGDQRLL-----VYEYMP-MGSLEDHLYDLEPDQEPLSWNTRMKIAVG 153
H N+++L+ T Q+ L VY M M + + +E D E +S+ +
Sbjct: 82 HKNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLC-- 137
Query: 154 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGT 213
G+++LH +I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+
Sbjct: 138 ---GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTR 189
Query: 214 YGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
Y Y APE + DI+S G ++ E++
Sbjct: 190 Y-YRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ D GLA+ +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WYR 189
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 28/223 (12%)
Query: 46 NFREANLIGEGGFGKVYKGRLESGQL-VAIKQLNHEGLQGHQEFIV-EVLMLSLLHHDNL 103
+F +G GGFG V++ + + AIK++ + +E ++ EV L+ L H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 104 VTLIGYCTSGD--QRLL-----VYEYMPMG-SLEDHLYDLEPDQEPLSWNTR---MKIAV 152
V + ++L VY Y+ M +++L D + + R + I +
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-----------LGPVG 201
A +E+LH K +++RDLK +NI D K+ DFGL L P+
Sbjct: 126 QIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 202 DNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
+ +V GT Y +PE + K DI+S G++L EL+
Sbjct: 183 AYARHTGQV-GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ FGLA+ +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WYR 189
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 85 HQEFIVEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSL---EDHLYDLEPDQEP 141
+ +F E+ +++ + ++ +T G T+ D+ ++YEYM S+ +++ + L+ +
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 142 LSWNTRMKIAVGAA-RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPV 200
+K + + Y+H + N + +RD+K +NIL+D + KLSDFG ++ +
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEY--M 202
Query: 201 GDNTHVSTRVMGTYGYCAPEY--AMSGKLTLKSDIYSFGVVL 240
D +R GTY + PE+ S K DI+S G+ L
Sbjct: 203 VDKKIKGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 28/230 (12%)
Query: 33 RSFTFRELAIATRNF----REANL--IGEGGFGKV---YKGRLESGQLVAIKQLNH--EG 81
R F + I F R NL IG G G V Y LE VAIK+L+ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQN 63
Query: 82 LQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYEYMP-MGSLEDHLYDLEP 137
+ E++++ ++H N++ L+ T S ++ VY M M + + +E
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL 123
Query: 138 DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL 197
D E +S+ + G+++LH +I+RDLK +NI++ +D K+ DFGLA+
Sbjct: 124 DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 198 GPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
G + + V+ Y Y APE + DI+S G ++ E++ +
Sbjct: 176 A--GTSFMMEPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 30/220 (13%)
Query: 47 FREANL---------IGEGGFGKVYKGRLES-GQLVAIKQLNHEGLQG------HQEFIV 90
FR+ N+ +G G F V K R +S G A K + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 91 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 150
EV +L + H N++TL + +L+ E + G L+D ++E L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEF 119
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHV 206
G+ YLH + + DLK NI+L + PK + DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 207 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
+ GT + APE L L++D++S GV+ L++G
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ D GLA+ +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WYR 189
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 122/294 (41%), Gaps = 53/294 (18%)
Query: 46 NFREANLI---GEGGFGKVYKGRLESGQLVA-IKQLNHEGLQGHQEFIVEVLMLSLLHHD 101
+F++ N + E G+++KGR + +V + ++ + ++F E L + H
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 102 NLVTLIGYCTS--GDQRLLVYEYMPMGSLEDHLYD---LEPDQEPLSWNTRMKIAVGAAR 156
N++ ++G C S L+ + P GSL + L++ DQ + +K A+ AR
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQ-----SQAVKFALDXAR 122
Query: 157 GLEYLHCKANPPVIYRD-LKSANILLDNDFNPKLS--DFGLAKLGPVGDNTHVSTRVMGT 213
G +LH P+I R L S ++ +D D ++S D + P R
Sbjct: 123 GXAFLHTLE--PLIPRHALNSRSVXIDEDXTARISXADVKFSFQSP--------GRXYAP 172
Query: 214 YGYCAPEYAMSGKLT----LKSDIYSFGVVLLELITGRKAM-DLSKGQ-GEQNLVSWSRP 267
+ APE A+ K +D +SF V+L EL+T DLS + G + + RP
Sbjct: 173 -AWVAPE-ALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRP 230
Query: 268 FLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVALD 321
+ P + + +C NE+ RP + IV L+
Sbjct: 231 TI------------------PPGISPHVSKLXKICXNEDPAKRPKFDXIVPILE 266
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 108/265 (40%), Gaps = 76/265 (28%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLV 104
+G G FG+V + + + + VA+K L H+ + E+ +++ + HH N+V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 105 TLIGYCTSGDQRLLVY------------------EYMP--------------MGSL---- 128
L+G CT L+V E++P +G++
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 147
Query: 129 --------------------EDHLYDLEPDQEP-------LSWNTRMKIAVGAARGLEYL 161
E L D+E ++ P L+ + + A+G+E+L
Sbjct: 148 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 207
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVST-RVMGTYGYCAPE 220
A+ I+RDL + NILL K+ DFGLA+ D +V + APE
Sbjct: 208 ---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPE 263
Query: 221 YAMSGKLTLKSDIYSFGVVLLELIT 245
T++SD++SFGV+L E+ +
Sbjct: 264 TIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 34/206 (16%)
Query: 65 RLESGQLVAIKQLNHE--GLQGHQEFIV------------------EVLMLSLLHHDNLV 104
L SGQ +K+ + GLQ +FI EV +L + H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
TL + +L+ E + G L+D ++E L+ + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 165 ANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 220
+ + DLK NI+L + PK + DFGLA G+ + GT + APE
Sbjct: 134 Q---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE 187
Query: 221 YAMSGKLTLKSDIYSFGVVLLELITG 246
L L++D++S GV+ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 108/265 (40%), Gaps = 76/265 (28%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLV 104
+G G FG+V + + + + VA+K L H+ + E+ +++ + HH N+V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 105 TLIGYCTSGDQRLLVY------------------EYMP--------------MGSL---- 128
L+G CT L+V E++P +G++
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 149
Query: 129 --------------------EDHLYDLEPDQEP-------LSWNTRMKIAVGAARGLEYL 161
E L D+E ++ P L+ + + A+G+E+L
Sbjct: 150 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 209
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVST-RVMGTYGYCAPE 220
A+ I+RDL + NILL K+ DFGLA+ D +V + APE
Sbjct: 210 ---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPE 265
Query: 221 YAMSGKLTLKSDIYSFGVVLLELIT 245
T++SD++SFGV+L E+ +
Sbjct: 266 TIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 45 RNFREANLIGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLH 99
+ ++ IG G G V Y L+ VAIK+L+ + + E++++ ++
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 100 HDNLVTLIGYCTSGDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGA 154
H N+++L+ T + L ++ Y+ M ++ +L +E D E +S+ +
Sbjct: 76 HKNIISLLNVFTP-QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC--- 131
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
G+++LH +I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y
Sbjct: 132 --GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 184
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
Y APE + DI+S G ++ E++
Sbjct: 185 -YRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 91 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 150
EV +L + H N++TL + +L+ E + G L+D ++E L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEF 119
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHV 206
G+ YLH + + DLK NI+L + PK + DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 207 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
+ GT + APE L L++D++S GV+ L++G
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 45 RNFREANLIGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLH 99
+ ++ IG G G V Y L+ VAIK+L+ + + E++++ ++
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 74
Query: 100 HDNLVTLIGYCTSGDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGA 154
H N+++L+ T + L ++ Y+ M ++ +L +E D E +S+ +
Sbjct: 75 HKNIISLLNVFTP-QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC--- 130
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
G+++LH +I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y
Sbjct: 131 --GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 183
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
Y APE + DI+S G ++ E++
Sbjct: 184 -YRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 45 RNFREANLIGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLH 99
+ ++ IG G G V Y L+ VAIK+L+ + + E++++ ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 100 HDNLVTLIGYCTSGDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGA 154
H N+++L+ T + L ++ Y+ M ++ +L +E D E +S+ +
Sbjct: 82 HKNIISLLNVFTP-QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC--- 137
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
G+++LH +I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y
Sbjct: 138 --GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY 190
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
Y APE + DI+S G ++ E++
Sbjct: 191 -YRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 45 RNFREANLIGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLH 99
+ ++ IG G G V Y L+ VAIK+L+ + + E++++ ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 100 HDNLVTLIGYCTSGDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGA 154
H N+++L+ T + L ++ Y+ M ++ +L +E D E +S+ +
Sbjct: 82 HKNIISLLNVFTP-QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC--- 137
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
G+++LH +I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y
Sbjct: 138 --GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 190
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
Y APE + DI+S G ++ E++
Sbjct: 191 -YRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 45 RNFREANLIGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLH 99
+ ++ IG G G V Y L+ VAIK+L+ + + E++++ ++
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 100 HDNLVTLIGYCTSGDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGA 154
H N+++L+ T + L ++ Y+ M ++ +L +E D E +S+ +
Sbjct: 76 HKNIISLLNVFTP-QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC--- 131
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
G+++LH +I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y
Sbjct: 132 --GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 184
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
Y APE + DI+S G ++ E++
Sbjct: 185 -YRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 45 RNFREANLIGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLH 99
+ ++ IG G G V Y L+ VAIK+L+ + + E++++ ++
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 80
Query: 100 HDNLVTLIGYCTSGDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGA 154
H N+++L+ T + L ++ Y+ M ++ +L +E D E +S+ +
Sbjct: 81 HKNIISLLNVFTP-QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC--- 136
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
G+++LH +I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y
Sbjct: 137 --GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 189
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
Y APE + DI+S G ++ E++
Sbjct: 190 -YRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 45 RNFREANLIGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLH 99
+ ++ IG G G V Y L+ VAIK+L+ + + E++++ ++
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 100 HDNLVTLIGYCTSGDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGA 154
H N+++L+ T + L ++ Y+ M ++ +L +E D E +S+ +
Sbjct: 83 HKNIISLLNVFTP-QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC--- 138
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
G+++LH +I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y
Sbjct: 139 --GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 191
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
Y APE + DI+S G ++ E++
Sbjct: 192 -YRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 34/206 (16%)
Query: 65 RLESGQLVAIKQLNHE--GLQGHQEFIV------------------EVLMLSLLHHDNLV 104
L SGQ +K+ + GLQ +FI EV +L + H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 105 TLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
TL + +L+ E + G L+D ++E L+ + G+ YLH
Sbjct: 78 TLHEVYENKTDVILIGELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 165 ANPPVIYRDLKSANILLDNDFNPK----LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 220
+ + DLK NI+L + PK + DFGLA G+ + GT + APE
Sbjct: 134 Q---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE 187
Query: 221 YAMSGKLTLKSDIYSFGVVLLELITG 246
L L++D++S GV+ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 45 RNFREANLIGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLH 99
+ ++ IG G G V Y L+ VAIK+L+ + + E++++ ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 100 HDNLVTLIGYCTSGDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGA 154
H N+++L+ T + L ++ Y+ M ++ +L +E D E +S+ +
Sbjct: 82 HKNIISLLNVFTP-QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC--- 137
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
G+++LH +I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y
Sbjct: 138 --GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 190
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
Y APE + DI+S G ++ E++
Sbjct: 191 -YRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 45 RNFREANLIGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLH 99
+ ++ IG G G V Y L+ VAIK+L+ + + E++++ ++
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 119
Query: 100 HDNLVTLIGYCTSGDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGA 154
H N+++L+ T + L ++ Y+ M ++ +L +E D E +S+ +
Sbjct: 120 HKNIISLLNVFTP-QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC--- 175
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
G+++LH +I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y
Sbjct: 176 --GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 228
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
Y APE + DI+S G ++ E++
Sbjct: 229 -YRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 45 RNFREANLIGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLH 99
+ ++ IG G G V Y L+ VAIK+L+ + + E++++ ++
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 100 HDNLVTLIGYCTSGDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGA 154
H N+++L+ T + L ++ Y+ M ++ +L +E D E +S+ +
Sbjct: 83 HKNIISLLNVFTP-QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC--- 138
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
G+++LH +I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y
Sbjct: 139 --GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 191
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
Y APE + DI+S G ++ E++
Sbjct: 192 -YRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 108/265 (40%), Gaps = 76/265 (28%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLV 104
+G G FG+V + + + + VA+K L H+ + E+ +++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 105 TLIGYCTSGDQRLLVY------------------EYMP--------------MGSL---- 128
L+G CT L+V E++P +G++
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 154
Query: 129 --------------------EDHLYDLEPDQEP-------LSWNTRMKIAVGAARGLEYL 161
E L D+E ++ P L+ + + A+G+E+L
Sbjct: 155 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 214
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVST-RVMGTYGYCAPE 220
A+ I+RDL + NILL K+ DFGLA+ D +V + APE
Sbjct: 215 ---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPE 270
Query: 221 YAMSGKLTLKSDIYSFGVVLLELIT 245
T++SD++SFGV+L E+ +
Sbjct: 271 TIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 91 EVLMLSLLHHDNLVTLIGYCT--SGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRM 148
E+ +L L H N+V L+ + D +V+E + G + + P +PLS +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-----VPTLKPLSEDQAR 140
Query: 149 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVST 208
+G+EYLH + +I+RD+K +N+L+ D + K++DFG++ D +T
Sbjct: 141 FYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT 197
Query: 209 RVMGTYGYCAPEYAMSGKLTLKS---DIYSFGVVLLELITGR 247
+GT + APE + D+++ GV L + G+
Sbjct: 198 --VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 106/264 (40%), Gaps = 74/264 (28%)
Query: 53 IGEGGFGKVYKG------RLESGQLVAIKQLNHEGLQG-HQEFIVEV-LMLSLLHHDNLV 104
+G G FG+V + + + + VA+K L H+ + E+ +++ + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 105 TLIGYCTSGDQRLLVY------------------EYMP--------------MGSL---- 128
L+G CT L+V E++P +G++
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 156
Query: 129 --------------------EDHLYDLEPDQEP-------LSWNTRMKIAVGAARGLEYL 161
E L D+E ++ P L+ + + A+G+E+L
Sbjct: 157 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 216
Query: 162 HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 221
A+ I+RDL + NILL K+ DFGLA+ + + APE
Sbjct: 217 ---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET 273
Query: 222 AMSGKLTLKSDIYSFGVVLLELIT 245
T++SD++SFGV+L E+ +
Sbjct: 274 IFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTLIGY 109
+G G +G V ++G VA+K+L+ + + + E+ +L + H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 110 CTSGDQRLLVYEYMPMGSLED--------HLYDLEPDQ----EPLSWNTRMKIAVGAARG 157
T P SLE+ HL + + + L+ + + RG
Sbjct: 90 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 158 LEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
L+Y+H + +I+RDLK +N+ ++ D K+ D GLA+ +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WYR 189
Query: 218 APEYAMSG-KLTLKSDIYSFGVVLLELITGR 247
APE ++ DI+S G ++ EL+TGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 45 RNFREANLIGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLH 99
+ ++ IG G G V Y L+ VAIK+L+ + + E++++ ++
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 119
Query: 100 HDNLVTLIGYCTSGDQRLLVYE--YMPMGSLEDHL---YDLEPDQEPLSWNTRMKIAVGA 154
H N+++L+ T + L ++ Y+ M ++ +L +E D E +S+ +
Sbjct: 120 HKNIISLLNVFTP-QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC--- 175
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTY 214
G+++LH +I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y
Sbjct: 176 --GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 228
Query: 215 GYCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
Y APE + DI+S G ++ E++
Sbjct: 229 -YRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 47 FREANLIGEGGFGKVY--KGRLESGQ--LVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDN 102
++ +G G +G+V K +L + + IK+ + + EV +L L H N
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 82
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLH 162
++ L + LV E G L D + ++ S I G YLH
Sbjct: 83 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL----RQKFSEVDAAVIMKQVLSGTTYLH 138
Query: 163 CKANPPVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
K N +++RDLK N+LL++ D K+ DFGL+ VG +GT Y AP
Sbjct: 139 -KHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM---KERLGTAYYIAP 192
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITG 246
E + K K D++S GV+L L+ G
Sbjct: 193 E-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 47 FREANLIGEGGFGKVYKGRLES-GQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVT 105
F+ + G+G FG V G+ +S G VAIK++ + ++E + + L++LHH N+V
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQ 83
Query: 106 LIGYCTSGDQR-------LLVYEYMP--MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAAR 156
L Y + +R +V EY+P + + Y + P+ I V +
Sbjct: 84 LQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPIL------IKVFLFQ 137
Query: 157 GLEYLHCKANPP--VIYRDLKSANILLDN-DFNPKLSDFGLA-KLGPVGDN-THVSTRVM 211
+ + C P V +RD+K N+L++ D KL DFG A KL P N ++ +R
Sbjct: 138 LIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY- 196
Query: 212 GTYGYCAPEYAMSGK-LTLKSDIYSFGVVLLELITGRKAM--DLSKGQ 256
Y APE + T DI+S G + E++ G D S GQ
Sbjct: 197 ----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ 240
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 41/231 (17%)
Query: 46 NFREANLIGEGGFGKVYKGRLESGQL-VAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDN 102
N+ +LIG G +G VY ++ + VAIK++N E L + + E+ +L+ L D
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 103 LVTLIGYCTSGDQRLLVYE--YMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
++ L D LL ++ Y+ + + L L L+ I G +
Sbjct: 87 IIRLYDLIIPDD--LLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENF 144
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL-------------------GPVG 201
+H +I+RDLK AN LL+ D + K+ DFGLA+ GP
Sbjct: 145 IHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN 201
Query: 202 DN------THVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELIT 245
N +HV TR Y APE + + KS DI+S G + EL+
Sbjct: 202 KNLKKQLTSHVVTR-----WYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 139 QEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG 198
+EP++ + + ARG+E+L + I+RDL + NILL + K+ DFGLA+
Sbjct: 193 KEPITMEDLISYSFQVARGMEFLSSRK---CIHRDLAARNILLSENNVVKICDFGLARDI 249
Query: 199 PVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELIT 245
+ + APE + KSD++S+GV+L E+ +
Sbjct: 250 YKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 42 IATRNFREANLIGEGGFGKVYKG------RLESGQLVAIKQLNHEGLQG--HQEFIVEVL 93
A + +G G FGKV + + + + VA+K L EG ++ + E+
Sbjct: 24 FARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLK-EGATASEYKALMTELK 82
Query: 94 MLSLL-HHDNLVTLIGYCT-SGDQRLLVYEYMPMGSLEDHL 132
+L+ + HH N+V L+G CT G +++ EY G+L ++L
Sbjct: 83 ILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 46 NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDN 102
N+ +LIG G +G VY + + VAIK++N E L + + E+ +L+ L D
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 103 LVTLIGYCTSGDQRLLVYE--YMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
++ L D LL ++ Y+ + + L L L+ I G ++
Sbjct: 89 IIRLHDLIIPED--LLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL----------------------G 198
+H +I+RDLK AN LL+ D + K+ DFGLA+ G
Sbjct: 147 IHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPG 203
Query: 199 PVGDN------THVSTRVMGTYGYCAPEYA-MSGKLTLKSDIYSFGVVLLELITGRKA 249
P N +HV TR Y APE + T DI+S G + EL+ K+
Sbjct: 204 PHNKNLKKQLTSHVVTR-----WYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 49 EANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH-HDNLVTL 106
+ +++GEG +V L + Q A+K + + EV ML H N++ L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 107 IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKAN 166
I + D+ LV+E M GS+ H++ E + + A L++LH N
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEA----SVVVQDVASALDFLH---N 129
Query: 167 PPVIYRDLKSANILLD--NDFNP-KLSDFGLAK-LGPVGDNTHVSTRVM----GTYGYCA 218
+ +RDLK NIL + N +P K+ DF L + GD + +ST + G+ Y A
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 219 PEY--AMSGKLTL---KSDIYSFGVVLLELITG 246
PE A S + ++ + D++S GV+L L++G
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 26/220 (11%)
Query: 35 FTFRE-LAIATRNFREANLIGEGGFGKVYKGRLESGQL---VAIKQLNHEGLQGHQEFIV 90
+ +RE + AT R +G G FG+V+ R+E Q A+K++ E +
Sbjct: 67 YEYREEVHWATHQLR----LGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRAE----- 115
Query: 91 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 150
E++ + L +V L G G + E + GSL L +Q L + +
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ----LVKEQGCLPEDRALYY 171
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDND-FNPKLSDFGLA-KLGP--VGDNTHV 206
A GLEYLH + +++ D+K+ N+LL +D + L DFG A L P +G +
Sbjct: 172 LGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLT 228
Query: 207 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
+ GT + APE + K D++S ++L ++ G
Sbjct: 229 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 21/201 (10%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G FG+V++ + ++G A+K++ E + + E++ + L +V L G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVR 136
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 169
G + E + GSL + + P+ L + + A GLEYLH + +
Sbjct: 137 EGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ------ALEGLEYLHTRR---I 187
Query: 170 IYRDLKSANILLDNDFN-PKLSDFGLA-KLGP--VGDNTHVSTRVMGTYGYCAPEYAMSG 225
++ D+K+ N+LL +D + L DFG A L P +G + + GT + APE M
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 247
Query: 226 KLTLKSDIYSFGVVLLELITG 246
K DI+S ++L ++ G
Sbjct: 248 PCDAKVDIWSSCCMMLHMLNG 268
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 28/230 (12%)
Query: 33 RSFTFRELAIATRNF----REANL--IGEGGFGKV---YKGRLESGQLVAIKQLNH--EG 81
R F + I F R NL IG G G V Y LE VAIK+L+ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQN 63
Query: 82 LQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYEYMP-MGSLEDHLYDLEP 137
+ E++++ ++H N++ L+ T S ++ VY M M + + +E
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL 123
Query: 138 DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL 197
D E +S+ + G+++LH +I+RDLK +NI++ +D K+ DFGLA+
Sbjct: 124 DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 198 GPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
G + + V+ Y Y APE + D++S G ++ E++ +
Sbjct: 176 A--GTSFMMEPEVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 21/201 (10%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G FG+V++ + ++G A+K++ E + + E++ + L +V L G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVR 120
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 169
G + E + GSL + + P+ L + + A GLEYLH + +
Sbjct: 121 EGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ------ALEGLEYLHTRR---I 171
Query: 170 IYRDLKSANILLDNDFN-PKLSDFGLA-KLGP--VGDNTHVSTRVMGTYGYCAPEYAMSG 225
++ D+K+ N+LL +D + L DFG A L P +G + + GT + APE M
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231
Query: 226 KLTLKSDIYSFGVVLLELITG 246
K DI+S ++L ++ G
Sbjct: 232 PCDAKVDIWSSCCMMLHMLNG 252
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 28/230 (12%)
Query: 33 RSFTFRELAIATRNF----REANL--IGEGGFGKV---YKGRLESGQLVAIKQLNH--EG 81
R F + I F R NL IG G G V Y LE VAIK+L+ +
Sbjct: 11 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQN 68
Query: 82 LQGHQEFIVEVLMLSLLHHDNLVTLIGYCT---SGDQRLLVYEYMP-MGSLEDHLYDLEP 137
+ E++++ ++H N++ L+ T S ++ VY M M + + +E
Sbjct: 69 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL 128
Query: 138 DQEPLSWNTRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL 197
D E +S+ + G+++LH +I+RDLK +NI++ +D K+ DFGLA+
Sbjct: 129 DHERMSYLLYQMLC-----GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 180
Query: 198 GPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
G + ++ V+ Y Y APE + D++S G ++ E++ +
Sbjct: 181 A--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 22/212 (10%)
Query: 45 RNFREANLIGEGGFGKV---YKGRLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLH 99
+ ++ IG G G V Y LE VAIK+L+ + + E++++ ++
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 100 HDNLVTLIGYCT---SGDQRLLVYEYMP-MGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
H N++ L+ T S ++ VY M M + + +E D E +S+ +
Sbjct: 76 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC---- 131
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 215
G+++LH +I+RDLK +NI++ +D K+ DFGLA+ G + ++ V+ Y
Sbjct: 132 -GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY- 184
Query: 216 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGR 247
Y APE + D++S G ++ E++ +
Sbjct: 185 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 18/219 (8%)
Query: 37 FRELAIATR---NFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQG--HQEFIV 90
F+ +A TR +++ +G+G F V + + Q A K +N + L HQ+
Sbjct: 20 FQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER 79
Query: 91 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 150
E + LL H N+V L + LV++ + G L + + E E + + +I
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQI 139
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNP---KLSDFGLAKLGPVGDNTHVS 207
LE ++ +++RDLK N+LL + KL+DFGLA V
Sbjct: 140 -------LESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGEQQAW 190
Query: 208 TRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
GT GY +PE DI++ GV+L L+ G
Sbjct: 191 FGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 26/220 (11%)
Query: 35 FTFRE-LAIATRNFREANLIGEGGFGKVYKGRLESGQL---VAIKQLNHEGLQGHQEFIV 90
+ +RE + AT R +G G FG+V+ R+E Q A+K++ E +
Sbjct: 86 YEYREEVHWATHQLR----LGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRAE----- 134
Query: 91 EVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKI 150
E++ + L +V L G G + E + GSL L +Q L + +
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL----GQLVKEQGCLPEDRALYY 190
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDND-FNPKLSDFGLA-KLGP--VGDNTHV 206
A GLEYLH + +++ D+K+ N+LL +D + L DFG A L P +G +
Sbjct: 191 LGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLT 247
Query: 207 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
+ GT + APE + K D++S ++L ++ G
Sbjct: 248 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 44 TRNFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQG--HQEFIVEVLMLSLLHH 100
T ++ +G+G F V + ++ +GQ A +N + L HQ+ E + LL H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
N+V L + L+++ + G L + + E E + + +I
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV------ 123
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNP---KLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
LHC V++R+LK N+LL + KL+DFGLA V GT GY
Sbjct: 124 LHCH-QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYL 180
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITG 246
+PE D+++ GV+L L+ G
Sbjct: 181 SPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 21/201 (10%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
+G G FG+V++ + ++G A+K++ E + + E++ + L +V L G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVR 134
Query: 112 SGDQRLLVYEYMPMGSLEDHLYDLE--PDQEPLSWNTRMKIAVGAARGLEYLHCKANPPV 169
G + E + GSL + + P+ L + + A GLEYLH + +
Sbjct: 135 EGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ------ALEGLEYLHTRR---I 185
Query: 170 IYRDLKSANILLDNDFN-PKLSDFGLA-KLGP--VGDNTHVSTRVMGTYGYCAPEYAMSG 225
++ D+K+ N+LL +D + L DFG A L P +G + + GT + APE M
Sbjct: 186 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 245
Query: 226 KLTLKSDIYSFGVVLLELITG 246
K DI+S ++L ++ G
Sbjct: 246 PCDAKVDIWSSCCMMLHMLNG 266
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 47 FREANLIGEGGFGKVY--KGRLESGQ--LVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDN 102
++ +G G +G+V K +L + + IK+ + + EV +L L H N
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLH 162
++ L + LV E G L D + L + MK + G YLH
Sbjct: 66 IMKLYEFFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVIMKQVLS---GTTYLH 121
Query: 163 CKANPPVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
K N +++RDLK N+LL++ D K+ DFGL+ VG +GT Y AP
Sbjct: 122 -KHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM---KERLGTAYYIAP 175
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITG 246
E + K K D++S GV+L L+ G
Sbjct: 176 E-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 92/217 (42%), Gaps = 37/217 (17%)
Query: 50 ANLIGEGGFGKVYKGRLESGQLV------AIKQLNHEGLQGHQEFIVEVLMLSLLHHDNL 103
+L+GEG +GKV K L+S L K+ G E+ +L L H N+
Sbjct: 10 GDLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 104 VTLIG--YCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA------ 155
+ L+ Y + +V EY G E + D P++ R +
Sbjct: 69 IQLVDVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPEK-------RFPVCQAHGYFCQLI 119
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-LGPVGDNTHVSTRVMGTY 214
GLEYLH + ++++D+K N+LL K+S G+A+ L P + T G+
Sbjct: 120 DGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-QGSP 175
Query: 215 GYCAPEYA-----MSGKLTLKSDIYSFGVVLLELITG 246
+ PE A SG K DI+S GV L + TG
Sbjct: 176 AFQPPEIANGLDTFSG---FKVDIWSAGVTLYNITTG 209
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 93 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 152
++L H N++TL G +V E G L D + Q+ S +
Sbjct: 68 ILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILR----QKFFSEREASAVLF 123
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANIL-LDNDFNP---KLSDFGLAKLGPVGDNTHVST 208
+ +EYLH + V++RDLK +NIL +D NP ++ DFG AK +N + T
Sbjct: 124 TITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK-QLRAENGLLXT 179
Query: 209 RVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
T + APE DI+S GV+L +TG
Sbjct: 180 PCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 51 NLIGEGGFGKVYKG--RLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH-HDN----- 102
+LIG+G FG+V K R+E + VAIK + ++ +Q I EV +L L++ HD
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQ-EWVAIKIIKNKKAFLNQAQI-EVRLLELMNKHDTEMKYY 117
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL--EPDQEPLSWNTRMKIAVGAARGLEY 160
+V L + + LV+E L +LYDL + +S N K A L +
Sbjct: 118 IVHLKRHFMFRNHLCLVFEM-----LSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLF 172
Query: 161 LHCKANP--PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
L A P +I+ DLK NILL NPK S + G + + + Y +
Sbjct: 173 L---ATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRS 226
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE + L D++S G +L+E+ TG
Sbjct: 227 PEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 51 NLIGEGGFGKVYKG--RLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH-HDN----- 102
+LIG+G FG+V K R+E + VAIK + ++ +Q I EV +L L++ HD
Sbjct: 41 SLIGKGSFGQVVKAYDRVEQ-EWVAIKIIKNKKAFLNQAQI-EVRLLELMNKHDTEMKYY 98
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL--EPDQEPLSWNTRMKIAVGAARGLEY 160
+V L + + LV+E L +LYDL + +S N K A L +
Sbjct: 99 IVHLKRHFMFRNHLCLVFEM-----LSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLF 153
Query: 161 LHCKANP--PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
L A P +I+ DLK NILL NPK S + G + + + Y +
Sbjct: 154 L---ATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRS 207
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE + L D++S G +L+E+ TG
Sbjct: 208 PEVLLGMPYDLAIDMWSLGCILVEMHTG 235
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 34/231 (14%)
Query: 37 FRELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLM 94
F+ +++ R + IG GG KV++ E Q+ AIK +N E Q + E+
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 95 LSLL--HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLY-----DLEPDQEPLSWNTR 147
L+ L H D ++ L Y + DQ +Y M G+++ + + ++P + W
Sbjct: 80 LNKLQQHSDKIIRLYDYEIT-DQ--YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM 136
Query: 148 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 207
LE +H +++ DLK AN L+ D KL DFG+A + V
Sbjct: 137 ----------LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVK 185
Query: 208 TRVMGTYGYCAPE--YAMSGK---------LTLKSDIYSFGVVLLELITGR 247
+GT Y PE MS ++ KSD++S G +L + G+
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 85/201 (42%), Gaps = 21/201 (10%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IG G FG R +S +LVA+K + G + + E++ L H N+V
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 112 SGDQRLLVYEYMPMGSLEDHLYD---LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 168
+ +V EY G L + + + D+ + + G+ Y H
Sbjct: 85 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GVSYCHAMQ--- 134
Query: 169 VIYRDLKSANILLDNDFNP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK 226
V +RDLK N LLD P K+ DFG +K + + +GT Y APE + +
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLKKE 191
Query: 227 LTLK-SDIYSFGVVLLELITG 246
K +D++S GV L ++ G
Sbjct: 192 YDGKVADVWSCGVTLYVMLVG 212
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 13/160 (8%)
Query: 90 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 149
E+ +L L H N++ L + + LV E + G L D + + E + + +
Sbjct: 97 TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ 156
Query: 150 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTHV 206
I A YLH +++RDLK N+L D K++DFGL+K + ++ +
Sbjct: 157 ILEAVA----YLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSK---IVEHQVL 206
Query: 207 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
V GT GYCAPE + D++S G++ L+ G
Sbjct: 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 93 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 152
++L H N++TL G LV E M G L D + Q+ S +
Sbjct: 73 ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLH 128
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANIL-LDNDFNP---KLSDFGLAKLGPVGDNTHVST 208
+ +EYLH + V++RDLK +NIL +D NP ++ DFG AK +N + T
Sbjct: 129 TIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLRAENGLLMT 184
Query: 209 RVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
T + APE DI+S G++L ++ G
Sbjct: 185 PCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 21/201 (10%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IG G FG R ++ +LVA+K + G + + E++ L H N+V
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 112 SGDQRLLVYEYMPMGSLEDHLYD---LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 168
+ +V EY G L + + + D+ + + G+ Y H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GVSYAHAMQ--- 135
Query: 169 VIYRDLKSANILLDNDFNP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK 226
V +RDLK N LLD P K++DFG +K + + +GT Y APE + +
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA---VGTPAYIAPEVLLKKE 192
Query: 227 LTLK-SDIYSFGVVLLELITG 246
K +D++S GV L ++ G
Sbjct: 193 YDGKVADVWSCGVTLYVMLVG 213
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 40/228 (17%)
Query: 51 NLIGEGGFGKVYKG--RLESGQLVAIKQLNH--EGLQGHQEFIVEVLMLSLLHHDNLVTL 106
+LIG G +G V + +LE ++VAIK++ E L + + E+ +L+ L+HD++V +
Sbjct: 59 HLIGTGSYGHVCEAYDKLEK-RVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKV 117
Query: 107 IGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV---GAARGLEYLHC 163
+ D Y+ + + L + P+ + T + I G++Y+H
Sbjct: 118 LDIVIPKDVEKFDELYVVLEIADSDFKKLF--RTPV-YLTELHIKTLLYNLLVGVKYVHS 174
Query: 164 KANPPVIYRDLKSANILLDNDFNPKLSDFGLAK-------------LGPVGDNTHVST-- 208
+++RDLK AN L++ D + K+ DFGLA+ + P D+ ++ T
Sbjct: 175 AG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP 231
Query: 209 -------RVMG---TYGYCAPEYA-MSGKLTLKSDIYSFGVVLLELIT 245
++ G T Y APE + T D++S G + EL+
Sbjct: 232 HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 23/234 (9%)
Query: 50 ANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGH-----QEFIVEVLMLSLLHHDNL 103
+IG+G F V + E+GQ A+K ++ ++ E + +L H ++
Sbjct: 29 CEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHC 163
V L+ +S +V+E+M L + S L Y H
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH- 147
Query: 164 KANPPVIYRDLKSANILL---DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 220
+ +I+RD+K N+LL +N KL DFG+A +G++ V+ +GT + APE
Sbjct: 148 --DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAI--QLGESGLVAGGRVGTPHFMAPE 203
Query: 221 YAMSGKLTLKSDIYSFGVVLLELITG---------RKAMDLSKGQGEQNLVSWS 265
D++ GV+L L++G R + KG+ + N WS
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWS 257
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 93 LMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAV 152
++L H N++TL G LV E M G L D + Q+ S +
Sbjct: 73 ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLH 128
Query: 153 GAARGLEYLHCKANPPVIYRDLKSANIL-LDNDFNP---KLSDFGLAKLGPVGDNTHVST 208
+ +EYLH + V++RDLK +NIL +D NP ++ DFG AK +N + T
Sbjct: 129 TIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLRAENGLLMT 184
Query: 209 RVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
T + APE DI+S G++L ++ G
Sbjct: 185 PCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 13/107 (12%)
Query: 148 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 207
+ I + A +E+LH K +++RDLK +NI D K+ DFGL +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 208 TRVMGTYG----------YCAPEYAMSGKLTLKSDIYSFGVVLLELI 244
M Y Y +PE + K DI+S G++L EL+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 17/200 (8%)
Query: 53 IGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH-HDNLVTLIGYC 110
+GEG F K +S Q A+K ++ Q+ E+ L L H N+V L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EITALKLCEGHPNIVKLHEVF 75
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPPVI 170
LV E + G L ++ ++ S I + ++H + V+
Sbjct: 76 HDQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMH---DVGVV 128
Query: 171 YRDLKSANILL---DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL 227
+RDLK N+L +++ K+ DFG A+L P DN + T T Y APE
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKP-PDNQPLKTPCF-TLHYAAPELLNQNGY 186
Query: 228 TLKSDIYSFGVVLLELITGR 247
D++S GV+L +++G+
Sbjct: 187 DESCDLWSLGVILYTMLSGQ 206
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 34/231 (14%)
Query: 37 FRELAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLM 94
F+ +++ R + IG GG KV++ E Q+ AIK +N E Q + E+
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 95 LSLL--HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLY-----DLEPDQEPLSWNTR 147
L+ L H D ++ L Y + DQ +Y M G+++ + + ++P + W
Sbjct: 80 LNKLQQHSDKIIRLYDYEIT-DQ--YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM 136
Query: 148 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS 207
LE +H +++ DLK AN L+ D KL DFG+A V
Sbjct: 137 ----------LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVK 185
Query: 208 TRVMGTYGYCAPE--YAMSGK---------LTLKSDIYSFGVVLLELITGR 247
+GT Y PE MS ++ KSD++S G +L + G+
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 84/201 (41%), Gaps = 21/201 (10%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IG G FG R +S +LVA+K + G + E++ L H N+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIAANVKREIINHRSLRHPNIVRFKEVIL 85
Query: 112 SGDQRLLVYEYMPMGSLEDHLYD---LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 168
+ +V EY G L + + + D+ + + G+ Y H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GVSYCHAMQ--- 135
Query: 169 VIYRDLKSANILLDNDFNP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK 226
V +RDLK N LLD P K+ DFG +K + + +GT Y APE + +
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLKKE 192
Query: 227 LTLK-SDIYSFGVVLLELITG 246
K +D++S GV L ++ G
Sbjct: 193 YDGKVADVWSCGVTLYVMLVG 213
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 25/208 (12%)
Query: 51 NLIGEGGFGKVYKG--RLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLH-HDN----- 102
+LIG+G FG+V K R+E + VAIK + ++ +Q I EV +L L++ HD
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQ-EWVAIKIIKNKKAFLNQAQI-EVRLLELMNKHDTEMKYY 117
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDL--EPDQEPLSWNTRMKIAVGAARGLEY 160
+V L + + LV+E L +LYDL + +S N K A L +
Sbjct: 118 IVHLKRHFMFRNHLCLVFEM-----LSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLF 172
Query: 161 LHCKANP--PVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 218
L A P +I+ DLK NILL NPK + G + + + Y +
Sbjct: 173 L---ATPELSIIHCDLKPENILL---CNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRS 226
Query: 219 PEYAMSGKLTLKSDIYSFGVVLLELITG 246
PE + L D++S G +L+E+ TG
Sbjct: 227 PEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 45/249 (18%)
Query: 49 EANLIGEGGFGKVYKGRLESGQLV---AIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVT 105
E +G G +G VYK + + G+ A+KQ+ G+ E+ +L L H N+++
Sbjct: 25 EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS--MSACREIALLRELKHPNVIS 82
Query: 106 LIG-YCTSGDQRL-LVYEYMPMGSLEDHLYDL-------EPDQEPLSWNTRM--KIAVGA 154
L + + D+++ L+++Y E L+ + + +++P+ M +
Sbjct: 83 LQKVFLSHADRKVWLLFDYA-----EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQI 137
Query: 155 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNP-----KLSDFGLAK-----LGPVGDNT 204
G+ YLH V++RDLK ANIL+ + P K++D G A+ L P+ D
Sbjct: 138 LDGIHYLHANW---VLHRDLKPANILVMGE-GPERGRVKIADMGFARLFNSPLKPLAD-- 191
Query: 205 HVSTRVMGTYGYCAPEYAMSGKLTLKS-DIYSFGVVLLELITGRKAMDLSKGQGEQNLVS 263
V+ T+ Y APE + + K+ DI++ G + EL+T Q +
Sbjct: 192 --LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF-----HCRQEDIK 244
Query: 264 WSRPFLKDQ 272
S P+ DQ
Sbjct: 245 TSNPYHHDQ 253
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 44 TRNFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGH--------QEFIVEVLM 94
++ + + +G G FG V+ E + V +K + E + + +E+ +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 95 LSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPD-QEPL-SWNTRMKI-A 151
LS + H N++ ++ + LV E G D P EPL S+ R + A
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSA 142
Query: 152 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM 211
VG YL K +I+RD+K NI++ DF KL DFG A G +
Sbjct: 143 VG------YLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT---FC 190
Query: 212 GTYGYCAPEYAMSGKLT-LKSDIYSFGVVLLELI 244
GT YCAPE M + +++S GV L L+
Sbjct: 191 GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 23/202 (11%)
Query: 53 IGEGGFG--KVYKGRLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYC 110
IG G FG ++ + +L + +LVA+K + G + E++ L H N+V
Sbjct: 28 IGSGNFGVARLMRDKL-TKELVAVKYIER-GAAIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 111 TSGDQRLLVYEYMPMGSLEDHLYD---LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANP 167
+ ++ EY G L + + + D+ + + G+ Y H
Sbjct: 86 LTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS-------GVSYCHSMQ-- 136
Query: 168 PVIYRDLKSANILLDNDFNP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG 225
+ +RDLK N LLD P K+ DFG +K + + +GT Y APE +
Sbjct: 137 -ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLRQ 192
Query: 226 KLTLK-SDIYSFGVVLLELITG 246
+ K +D++S GV L ++ G
Sbjct: 193 EYDGKIADVWSCGVTLYVMLVG 214
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 88/216 (40%), Gaps = 28/216 (12%)
Query: 52 LIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGH-----------QEFIVEVLMLSLLHH 100
I G +G V G G VAIK++ + G + + E+ +L+ HH
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
N++ L ++ + Y+ + L + DQ R+ I+ + Y
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQ-------RIVISPQHIQYFMY 141
Query: 161 -----LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 215
LH V++RDL NILL ++ + + DF LA+ N T +
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN---KTHYVTHRW 198
Query: 216 YCAPEYAMSGK-LTLKSDIYSFGVVLLELITGRKAM 250
Y APE M K T D++S G V+ E+ RKA+
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKAL 233
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 88/216 (40%), Gaps = 28/216 (12%)
Query: 52 LIGEGGFGKVYKGRLESGQLVAIKQLNHEGLQGH-----------QEFIVEVLMLSLLHH 100
I G +G V G G VAIK++ + G + + E+ +L+ HH
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
N++ L ++ + Y+ + L + DQ R+ I+ + Y
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQ-------RIVISPQHIQYFMY 141
Query: 161 -----LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 215
LH V++RDL NILL ++ + + DF LA+ N T +
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN---KTHYVTHRW 198
Query: 216 YCAPEYAMSGK-LTLKSDIYSFGVVLLELITGRKAM 250
Y APE M K T D++S G V+ E+ RKA+
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKAL 233
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 25/207 (12%)
Query: 51 NLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD------NL 103
+IG+G FG+V K + Q VA+K + +E + H++ E+ +L L N+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQ--EPLSWNTRMKIAVGAARGLEYL 161
+ ++ T + + +E + M +LY+L + S K A + L+ L
Sbjct: 162 IHMLENFTFRNHICMTFELLSM-----NLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 162 HCKANPPVIYRDLKSANILLDNDFNP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
H +I+ DLK NILL K+ DFG + ++ V T + + Y AP
Sbjct: 217 HKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYTXIQSRF-YRAP 268
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITG 246
E + + + D++S G +L EL+TG
Sbjct: 269 EVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 34/228 (14%)
Query: 40 LAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLMLSL 97
+++ R + IG GG KV++ E Q+ AIK +N E Q + E+ L+
Sbjct: 3 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 62
Query: 98 L--HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLY-----DLEPDQEPLSWNTRMKI 150
L H D ++ L Y + DQ +Y M G+++ + + ++P + W
Sbjct: 63 LQQHSDKIIRLYDYEIT-DQ--YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM--- 116
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
LE +H +++ DLK AN L+ D KL DFG+A + V
Sbjct: 117 -------LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 168
Query: 211 MGTYGYCAPEYA--MSGK---------LTLKSDIYSFGVVLLELITGR 247
+GT Y PE MS ++ KSD++S G +L + G+
Sbjct: 169 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 34/228 (14%)
Query: 40 LAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLMLSL 97
+++ R + IG GG KV++ E Q+ AIK +N E Q + E+ L+
Sbjct: 7 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 66
Query: 98 L--HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLY-----DLEPDQEPLSWNTRMKI 150
L H D ++ L Y + DQ +Y M G+++ + + ++P + W
Sbjct: 67 LQQHSDKIIRLYDYEIT-DQ--YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM--- 120
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
LE +H +++ DLK AN L+ D KL DFG+A + V
Sbjct: 121 -------LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 172
Query: 211 MGTYGYCAPEYA--MSGK---------LTLKSDIYSFGVVLLELITGR 247
+GT Y PE MS ++ KSD++S G +L + G+
Sbjct: 173 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 25/207 (12%)
Query: 51 NLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHD------NL 103
+IG+G FG+V K + Q VA+K + +E + H++ E+ +L L N+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 104 VTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQ--EPLSWNTRMKIAVGAARGLEYL 161
+ ++ T + + +E + M +LY+L + S K A + L+ L
Sbjct: 162 IHMLENFTFRNHICMTFELLSM-----NLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 162 HCKANPPVIYRDLKSANILLDNDFNP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 219
H +I+ DLK NILL K+ DFG + ++ V T + + Y AP
Sbjct: 217 HKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYTXIQSRF-YRAP 268
Query: 220 EYAMSGKLTLKSDIYSFGVVLLELITG 246
E + + + D++S G +L EL+TG
Sbjct: 269 EVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 21/201 (10%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IG G FG R +S +LVA+K + G + + E++ L H N+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 112 SGDQRLLVYEYMPMGSLEDHLYD---LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 168
+ +V EY G L + + + D+ + + G+ Y H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GVSYCHAMQ--- 135
Query: 169 VIYRDLKSANILLDNDFNP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK 226
V +RDLK N LLD P K+ FG +K + + +GT Y APE + +
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST---VGTPAYIAPEVLLKKE 192
Query: 227 LTLK-SDIYSFGVVLLELITG 246
K +D++S GV L ++ G
Sbjct: 193 YDGKVADVWSCGVTLYVMLVG 213
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 34/228 (14%)
Query: 40 LAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLMLSL 97
+++ R + IG GG KV++ E Q+ AIK +N E Q + E+ L+
Sbjct: 51 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 110
Query: 98 L--HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLY-----DLEPDQEPLSWNTRMKI 150
L H D ++ L Y + DQ +Y M G+++ + + ++P + W
Sbjct: 111 LQQHSDKIIRLYDYEIT-DQ--YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM--- 164
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
LE +H +++ DLK AN L+ D KL DFG+A + V
Sbjct: 165 -------LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 211 MGTYGYCAPE--YAMSGK---------LTLKSDIYSFGVVLLELITGR 247
+GT Y PE MS ++ KSD++S G +L + G+
Sbjct: 217 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 34/228 (14%)
Query: 40 LAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLMLSL 97
+++ R + IG GG KV++ E Q+ AIK +N E Q + E+ L+
Sbjct: 4 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 63
Query: 98 L--HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLY-----DLEPDQEPLSWNTRMKI 150
L H D ++ L Y + DQ +Y M G+++ + + ++P + W
Sbjct: 64 LQQHSDKIIRLYDYEIT-DQ--YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM--- 117
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
LE +H +++ DLK AN L+ D KL DFG+A + V
Sbjct: 118 -------LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 169
Query: 211 MGTYGYCAPE--YAMSGK---------LTLKSDIYSFGVVLLELITGR 247
+GT Y PE MS ++ KSD++S G +L + G+
Sbjct: 170 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 83/201 (41%), Gaps = 21/201 (10%)
Query: 53 IGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVTLIGYCT 111
IG G FG R +S +LVA+K + G + + E++ L H N+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 112 SGDQRLLVYEYMPMGSLEDHLYD---LEPDQEPLSWNTRMKIAVGAARGLEYLHCKANPP 168
+ +V EY G L + + + D+ + + G+ Y H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GVSYCHAMQ--- 135
Query: 169 VIYRDLKSANILLDNDFNP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK 226
V +RDLK N LLD P K+ FG +K + +GT Y APE + +
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ---PKDTVGTPAYIAPEVLLKKE 192
Query: 227 LTLK-SDIYSFGVVLLELITG 246
K +D++S GV L ++ G
Sbjct: 193 YDGKVADVWSCGVTLYVMLVG 213
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 34/228 (14%)
Query: 40 LAIATRNFREANLIGEGGFGKVYKGRLESGQLVAIKQLNHEGL--QGHQEFIVEVLMLSL 97
+++ R + IG GG KV++ E Q+ AIK +N E Q + E+ L+
Sbjct: 51 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 110
Query: 98 L--HHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLY-----DLEPDQEPLSWNTRMKI 150
L H D ++ L Y + DQ +Y M G+++ + + ++P + W
Sbjct: 111 LQQHSDKIIRLYDYEIT-DQ--YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM--- 164
Query: 151 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV 210
LE +H +++ DLK AN L+ D KL DFG+A + V
Sbjct: 165 -------LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 211 MGTYGYCAPE--YAMSGK---------LTLKSDIYSFGVVLLELITGR 247
+GT Y PE MS ++ KSD++S G +L + G+
Sbjct: 217 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 46 NFREANLIGEGGFGKVYKGR-LESGQLVAIK--QLNHEGLQGHQEFIVEVLMLSLLHHDN 102
NFR IG G FG++ G+ L + + VAIK + Q H E+ L D
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEY---RFYKQLGSGDG 66
Query: 103 LVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLH 162
+ + + G +V E + SLED L+DL S T + IA+ +EY+H
Sbjct: 67 IPQVYYFGPCGKYNAMVLELLG-PSLED-LFDL--CDRTFSLKTVLMIAIQLISRMEYVH 122
Query: 163 CKANPPVIYRDLKSANILLDNDFNPK-----LSDFGLAK--LGPVGDNTHVSTR----VM 211
K +IYRD+K N L+ N + DFGLAK + P H+ R +
Sbjct: 123 SKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPE-TKKHIPYREHKSLT 178
Query: 212 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITG 246
GT Y + + + + + D+ + G + + + G
Sbjct: 179 GTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRG 213
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 27/274 (9%)
Query: 47 FREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGHQEFIVEVLMLSLLHHDNLVT 105
FR IG G FG++Y G +++ + VAIK N + H + + E + +L +
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKIYRILQGGTGIP 66
Query: 106 LI-GYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEYLHCK 164
+ + GD +LV + + SLED L++ LS T + +A +E++H K
Sbjct: 67 NVRWFGVEGDYNVLVMDLL-GPSLED-LFNF--CSRKLSLKTVLMLADQMINRVEFVHSK 122
Query: 165 ANPPVIYRDLKSANILLDNDFNPK---LSDFGLA-KLGPVGDNTHVSTR----VMGTYGY 216
+ ++RD+K N L+ + DFGLA K + H+ R + GT Y
Sbjct: 123 S---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARY 179
Query: 217 CAPEYAMSGKLTLKSDIYSFGVVLLELITGR-KAMDLSKGQGEQNLVSWSRPFLKDQKKF 275
+ + + + + D+ S G VL+ + G L G +Q S +KK
Sbjct: 180 ASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS------EKKV 233
Query: 276 VHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANF 309
++ L G YP +Y ++ +++ ++
Sbjct: 234 ATSIEALCRG-YPTEFASYFHYCRSLRFDDKPDY 266
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 39/217 (17%)
Query: 42 IATRNFREANLIGEGGFGKVYKG--RLESGQLVAIKQLNHEG-------LQGHQEFIVEV 92
I + I GG G +Y R +G+ V +K L H G ++F+ EV
Sbjct: 77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV 136
Query: 93 LMLSLLHHDNLVTLIGYCTSGDQR-----LLVYEYMPMGSLEDHLYDLEPDQEPLSWNTR 147
+ H ++V + + D+ +V EY+ SL+ P E +++
Sbjct: 137 V------HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLE 190
Query: 148 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG-LAKLGPVGDNTHV 206
+ A L YLH ++Y DLK NI+L + KL D G ++++ G
Sbjct: 191 ILPA------LSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFG----- 235
Query: 207 STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLEL 243
+ GT G+ APE +G T+ +DIY+ G L L
Sbjct: 236 --YLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAAL 269
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 171 YRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK 230
+RD+K NIL+ D L DFG+A T + V GT Y APE T +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 231 SDIYSFGVVLLELITG 246
+DIY+ VL E +TG
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 44 TRNFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGH--QEFIVEVLMLSLLHH 100
+ N+ +G+G F V + +G A K +N + L Q+ E + L H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
N+V L LV++ + G L + + E E + + +I A
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA----- 118
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNP---KLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
+C +N +++R+LK N+LL + KL+DFGLA + H GT GY
Sbjct: 119 -YCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYL 173
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITG 246
+PE + DI++ GV+L L+ G
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 44 TRNFREANLIGEGGFGKVYKG-RLESGQLVAIKQLNHEGLQGH--QEFIVEVLMLSLLHH 100
+ N+ +G+G F V + +G A K +N + L Q+ E + L H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 101 DNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAARGLEY 160
N+V L LV++ + G L + + E E + + +I A
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA----- 119
Query: 161 LHCKANPPVIYRDLKSANILLDNDFNP---KLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 217
+C +N +++R+LK N+LL + KL+DFGLA + H GT GY
Sbjct: 120 -YCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYL 174
Query: 218 APEYAMSGKLTLKSDIYSFGVVLLELITG 246
+PE + DI++ GV+L L+ G
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 90 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 149
E+ +L L+H ++ + + + D +V E M G L D + N R+K
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVG----------NKRLK 112
Query: 150 IAVGAAR------GLEYLHCKANPPVIYRDLKSANILL---DNDFNPKLSDFGLAKLGPV 200
A ++YLH +I+RDLK N+LL + D K++DFG +K+ +
Sbjct: 113 EATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--L 167
Query: 201 GDNTHVSTRVMGTYGYCAPEYAMS---GKLTLKSDIYSFGVVLLELITG 246
G+ + + T + GT Y APE +S D +S GV+L ++G
Sbjct: 168 GETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 90 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 149
E+ +L L+H ++ + + + D +V E M G L D + N R+K
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVG----------NKRLK 112
Query: 150 IAVGAAR------GLEYLHCKANPPVIYRDLKSANILL---DNDFNPKLSDFGLAKLGPV 200
A ++YLH +I+RDLK N+LL + D K++DFG +K+ +
Sbjct: 113 EATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--L 167
Query: 201 GDNTHVSTRVMGTYGYCAPEYAMS---GKLTLKSDIYSFGVVLLELITG 246
G+ + + T + GT Y APE +S D +S GV+L ++G
Sbjct: 168 GETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 90 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 149
E+ +L L+H ++ + + + D +V E M G L D + N R+K
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVG----------NKRLK 112
Query: 150 IAVGAAR------GLEYLHCKANPPVIYRDLKSANILL---DNDFNPKLSDFGLAKLGPV 200
A ++YLH +I+RDLK N+LL + D K++DFG +K+ +
Sbjct: 113 EATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--L 167
Query: 201 GDNTHVSTRVMGTYGYCAPEYAMS---GKLTLKSDIYSFGVVLLELITG 246
G+ + + T + GT Y APE +S D +S GV+L ++G
Sbjct: 168 GETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 90 VEVLMLSLLHHDNLVTLIGYCTSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMK 149
E+ +L L+H ++ + + + D +V E M G L D + N R+K
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVG----------NKRLK 111
Query: 150 IAVGAAR------GLEYLHCKANPPVIYRDLKSANILL---DNDFNPKLSDFGLAKLGPV 200
A ++YLH +I+RDLK N+LL + D K++DFG +K+ +
Sbjct: 112 EATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--L 166
Query: 201 GDNTHVSTRVMGTYGYCAPEYAMS---GKLTLKSDIYSFGVVLLELITG 246
G+ + + T + GT Y APE +S D +S GV+L ++G
Sbjct: 167 GETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 22/214 (10%)
Query: 39 ELAIATRNFREANLIGEGGFGKVYKGR-LESGQLVAIKQLNHEGLQ-GHQEFIVEVLMLS 96
EL + R +R IG G FG +Y G + +G+ VAIK E ++ H + +E +
Sbjct: 4 ELRVGNR-YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL---ECVKTKHPQLHIESKIYK 59
Query: 97 LLHHDNLVTLIGYC-TSGDQRLLVYEYMPMGSLEDHLYDLEPDQEPLSWNTRMKIAVGAA 155
++ + I +C GD ++V E + SLED L++ S T + +A
Sbjct: 60 MMQGGVGIPTIRWCGAEGDYNVMVMELLG-PSLED-LFNF--CSRKFSLKTVLLLADQMI 115
Query: 156 RGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS---DFGLA-KLGPVGDNTHVSTR-- 209
+EY+H K I+RD+K N L+ L DFGLA K + H+ R
Sbjct: 116 SRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 172
Query: 210 --VMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLL 241
+ GT Y + + + + + D+ S G VL+
Sbjct: 173 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLM 206
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,028,492
Number of Sequences: 62578
Number of extensions: 419625
Number of successful extensions: 3545
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 221
Number of HSP's that attempted gapping in prelim test: 862
Number of HSP's gapped (non-prelim): 1141
length of query: 360
length of database: 14,973,337
effective HSP length: 100
effective length of query: 260
effective length of database: 8,715,537
effective search space: 2266039620
effective search space used: 2266039620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)