BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018129
(360 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LAZ7|CSN5B_ARATH COP9 signalosome complex subunit 5b OS=Arabidopsis thaliana
GN=CSN5B PE=1 SV=2
Length = 357
Score = 588 bits (1515), Expect = e-167, Method: Compositional matrix adjust.
Identities = 300/360 (83%), Positives = 326/360 (90%), Gaps = 10/360 (2%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
S+IA+KTWELENNI+ +E PT+S ASD+IF YD+ +Q K QQEKPW +DP+YFKR
Sbjct: 6 SAIARKTWELENNILPVE--PTDS-----ASDSIFHYDDASQAKIQQEKPWASDPNYFKR 58
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
V ISALALLKMVVHARSGGTIE+MGLMQGKT+GD IIVMDAFALPVEGTETRVNAQ+DAY
Sbjct: 59 VHISALALLKMVVHARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVNAQSDAY 118
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYMV+YSQT+K AGRLEN VGWYHSHPGYGCWLSGIDVSTQMLNQQ+QEPFLAVVIDPTR
Sbjct: 119 EYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTR 178
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
TVSAGKVEIGAFRTYPEG+K D+ +SEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD
Sbjct: 179 TVSAGKVEIGAFRTYPEGHKISDDHVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 238
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPP-- 300
HLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAE+QL++SRYG IAP
Sbjct: 239 SHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESQLANSRYGG-IAPAGH 297
Query: 301 PRRKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSTKTHAEPSDPEPMIES 360
RRKE++ QLAKITRDSAKITVEQVHGLMSQVIKDILFNS RQS K+ + SDPEPMI S
Sbjct: 298 QRRKEDEPQLAKITRDSAKITVEQVHGLMSQVIKDILFNSARQSKKSADDSSDPEPMITS 357
>sp|Q9FVU9|CSN5A_ARATH COP9 signalosome complex subunit 5a OS=Arabidopsis thaliana
GN=CSN5A PE=1 SV=1
Length = 358
Score = 585 bits (1507), Expect = e-166, Method: Compositional matrix adjust.
Identities = 294/358 (82%), Positives = 321/358 (89%), Gaps = 9/358 (2%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
S+IA+KTWELEN+I+++++P S SD IF+YD+ +QT+FQQEKPW NDPHYFKR
Sbjct: 6 STIARKTWELENSILTVDSP-------DSTSDNIFYYDDTSQTRFQQEKPWENDPHYFKR 58
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
VKISALALLKMVVHARSGGTIE+MGLMQGKTDGD IIVMDAFALPVEGTETRVNAQ DAY
Sbjct: 59 VKISALALLKMVVHARSGGTIEIMGLMQGKTDGDTIIVMDAFALPVEGTETRVNAQDDAY 118
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYMV+YSQTNK AGRLEN VGWYHSHPGYGCWLSGIDVSTQ LNQQ QEPFLAVVIDPTR
Sbjct: 119 EYMVEYSQTNKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVIDPTR 178
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
TVSAGKVEIGAFRTY +GYKPPDEP+SEYQTIPLNKIEDFGVHCKQYYSLD+TYFKSSLD
Sbjct: 179 TVSAGKVEIGAFRTYSKGYKPPDEPVSEYQTIPLNKIEDFGVHCKQYYSLDVTYFKSSLD 238
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
HLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAE+ L SR+G ++
Sbjct: 239 SHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESHLVQSRFGGVVPSSLH 298
Query: 303 RKEED-SQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS-TKTHAEPSDPEPMI 358
+K+ED SQL KITRDSAKITVEQVHGLMSQVIKD LFNS+RQS K+ + SDP+PMI
Sbjct: 299 KKKEDESQLTKITRDSAKITVEQVHGLMSQVIKDELFNSMRQSNNKSPTDSSDPDPMI 356
>sp|Q54PF3|CSN5_DICDI COP9 signalosome complex subunit 5 OS=Dictyostelium discoideum
GN=csn5 PE=1 SV=1
Length = 332
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/341 (66%), Positives = 274/341 (80%), Gaps = 18/341 (5%)
Query: 6 AQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKI 65
A KT+ELENNI +++ D +F YD +F Q KPW DPHYFK VKI
Sbjct: 9 ALKTFELENNIQTID------------HDQLFKYDPQQYQQFLQSKPWSKDPHYFKHVKI 56
Query: 66 SALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYM 125
SA+ALLKMV+HARSGG +EVMG++ GK + + +I+MD+FALPVEGTETRVNAQ +AYEYM
Sbjct: 57 SAIALLKMVMHARSGGKLEVMGMLMGKVENNTMIIMDSFALPVEGTETRVNAQVEAYEYM 116
Query: 126 VDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVS 185
V+Y + KQ GRLENA+GWYHSHPGYGCWLSGIDV TQ +NQQ+ EP+L +VIDPTRTVS
Sbjct: 117 VEYLELIKQTGRLENALGWYHSHPGYGCWLSGIDVGTQSVNQQYSEPWLGIVIDPTRTVS 176
Query: 186 AGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHL 245
AGKVEIGAFRTYP+GYKPP+E SEYQ+IPL+KIEDFGVHCKQYYSL+ITYFKSSLD L
Sbjct: 177 AGKVEIGAFRTYPQGYKPPNEGPSEYQSIPLSKIEDFGVHCKQYYSLEITYFKSSLDQQL 236
Query: 246 LDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPRRKE 305
LD LWNKYWVNTLSSSP+ N DY+ GQI+DL+EKLEQAE QLSHSR L +K+
Sbjct: 237 LDKLWNKYWVNTLSSSPIFSNRDYITGQINDLSEKLEQAETQLSHSRSSIL-----DKKK 291
Query: 306 EDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSTK 346
E+S L+K+++DS+K+T+EQV G+MSQV K+ +FN Q+TK
Sbjct: 292 EESLLSKVSKDSSKVTIEQVQGIMSQVFKNSIFNEC-QTTK 331
>sp|Q6P635|CSN5_XENTR COP9 signalosome complex subunit 5 OS=Xenopus tropicalis GN=cops5
PE=2 SV=1
Length = 334
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/339 (68%), Positives = 266/339 (78%), Gaps = 13/339 (3%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
SS+AQKTWEL NN+ + + D I+ YD+ Q + KPW D HYFK
Sbjct: 6 SSVAQKTWELSNNM-----------QEVQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKY 54
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AY
Sbjct: 55 CKVSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAY 114
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTR
Sbjct: 115 EYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTR 174
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
T+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYY+L++TYFKSSLD
Sbjct: 175 TISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVTYFKSSLD 234
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQ+E QL + + R
Sbjct: 235 RKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDR 294
Query: 303 RKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 341
+ E+ +LAK TRDS K T+E +HGLMSQVIKD LFN +
Sbjct: 295 KSED--KLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 331
>sp|Q9XZ58|CSN5_DROME COP9 signalosome complex subunit 5 OS=Drosophila melanogaster
GN=CSN5 PE=1 SV=1
Length = 327
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/341 (65%), Positives = 261/341 (76%), Gaps = 18/341 (5%)
Query: 1 MDSSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYF 60
MDS AQKTWELENNI +T P+ D IF YD Q + KPW DPH+F
Sbjct: 1 MDSDAAQKTWELENNI---QTLPS--------CDEIFRYDAEQQRQIIDAKPWEKDPHFF 49
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQAD 120
K +KISALALLKMV+HARSGGT+EVMGLM GK + + +IVMDAFALPVEGTETRVNAQA
Sbjct: 50 KDIKISALALLKMVMHARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQ 109
Query: 121 AYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDP 180
AYEYM Y + K+ GR+E+AVGWYHSHPGYGCWLSGIDVSTQMLNQ +QEPF+A+V+DP
Sbjct: 110 AYEYMTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDP 169
Query: 181 TRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSS 240
RTVSAGKV +GAFRTYP+GYKPP+E SEYQTIPLNKIEDFGVHCKQYY L+I+YFKS+
Sbjct: 170 VRTVSAGKVCLGAFRTYPKGYKPPNEEPSEYQTIPLNKIEDFGVHCKQYYPLEISYFKSA 229
Query: 241 LDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPP 300
LD LLD LWNKYWVNTL SS LL N +Y GQI DL+EKLEQ+EN L
Sbjct: 230 LDRRLLDSLWNKYWVNTLGSSGLLTNTEYTTGQIMDLSEKLEQSENFLGR-------GTD 282
Query: 301 PRRKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 341
K + +L+K TRD ++ T+E +HGLM+Q++KD LFN V
Sbjct: 283 VNEKRSEDKLSKATRDCSRSTIELIHGLMAQIVKDKLFNKV 323
>sp|Q6PC30|CSN5_DANRE COP9 signalosome complex subunit 5 OS=Danio rerio GN=cops5 PE=2
SV=1
Length = 334
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/342 (69%), Positives = 266/342 (77%), Gaps = 13/342 (3%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
SSIA KTWEL +NS + + D I+ YD+ Q + KPW D HYFK
Sbjct: 4 SSIAMKTWEL-----------SNSMQEVQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKY 52
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AY
Sbjct: 53 CKLSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAY 112
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTR
Sbjct: 113 EYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTR 172
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
T+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYY+L+++YFKSSLD
Sbjct: 173 TISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLD 232
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQAE QL + L
Sbjct: 233 RKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQAEAQLGRGSF-MLGLDTHD 291
Query: 303 RKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS 344
RK ED +LAK TRDS K T+E +HGLMSQVIKD LFN V S
Sbjct: 292 RKSED-KLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQVNTS 332
>sp|Q6GLM9|CSN5_XENLA COP9 signalosome complex subunit 5 OS=Xenopus laevis GN=cops5 PE=2
SV=1
Length = 332
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/339 (68%), Positives = 266/339 (78%), Gaps = 13/339 (3%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
SS+AQKTWEL NN+ + + D I+ YD+ Q + KPW D HYFK
Sbjct: 4 SSVAQKTWELSNNM-----------QEVQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKY 52
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AY
Sbjct: 53 CKVSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAY 112
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTR
Sbjct: 113 EYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTR 172
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
T+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYY+L++TYFKSSLD
Sbjct: 173 TISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVTYFKSSLD 232
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
LL+LLWNKYWVNTLSSS LL N +Y GQ+ DL+EKLEQ+E QL + L
Sbjct: 233 RKLLELLWNKYWVNTLSSSSLLTNAEYTTGQVFDLSEKLEQSEAQLGRGSF-MLGLESHD 291
Query: 303 RKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 341
RK ED +LAK TRDS K T+E +HGLMSQVIKD LFN +
Sbjct: 292 RKSED-KLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 329
>sp|Q92905|CSN5_HUMAN COP9 signalosome complex subunit 5 OS=Homo sapiens GN=COPS5 PE=1
SV=4
Length = 334
Score = 460 bits (1184), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/342 (68%), Positives = 266/342 (77%), Gaps = 13/342 (3%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
S +AQKTWEL NN+ + + D I+ YD+ Q + KPW D HYFK
Sbjct: 6 SGMAQKTWELANNM-----------QEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKY 54
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AY
Sbjct: 55 CKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAY 114
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTR
Sbjct: 115 EYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTR 174
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
T+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYY+L+++YFKSSLD
Sbjct: 175 TISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLD 234
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQ+E QL + L
Sbjct: 235 RKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSF-MLGLETHD 293
Query: 303 RKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS 344
RK ED +LAK TRDS K T+E +HGLMSQVIKD LFN + S
Sbjct: 294 RKSED-KLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINIS 334
>sp|O35864|CSN5_MOUSE COP9 signalosome complex subunit 5 OS=Mus musculus GN=Cops5 PE=1
SV=3
Length = 334
Score = 460 bits (1183), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/339 (68%), Positives = 265/339 (78%), Gaps = 13/339 (3%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
S +AQKTWEL NN+ + + D I+ YD+ Q + KPW D HYFK
Sbjct: 6 SGMAQKTWELANNM-----------QEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKY 54
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AY
Sbjct: 55 CKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAY 114
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTR
Sbjct: 115 EYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTR 174
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
T+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYY+L+++YFKSSLD
Sbjct: 175 TISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLD 234
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQ+E QL + L
Sbjct: 235 RKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSF-MLGLETHD 293
Query: 303 RKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 341
RK ED +LAK TRDS K T+E +HGLMSQVIKD LFN +
Sbjct: 294 RKSED-KLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 331
>sp|P91001|CSN5_CAEEL COP9 signalosome complex subunit 5 OS=Caenorhabditis elegans
GN=csn-5 PE=1 SV=1
Length = 368
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/380 (50%), Positives = 249/380 (65%), Gaps = 48/380 (12%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
SS+ Q+ WE ENN+ ++ D+IF Y+ Q + + KPW DPHYFK+
Sbjct: 10 SSVPQRNWEKENNVQNV--------------DSIFEYNNKQQVEIRNAKPWDKDPHYFKQ 55
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
+KISA+ALLKM +HA+ GG +E+MGL+QG+ D ++ I++D FALPVEGTETRVNAQA AY
Sbjct: 56 IKISAIALLKMTMHAKRGGNLEIMGLLQGRIDANSFIILDVFALPVEGTETRVNAQAQAY 115
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYM YS+ GR E VGWYHSHPGYGCWLSGIDVSTQ LNQ+FQEP++A+VIDP R
Sbjct: 116 EYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVIDPLR 175
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
T+SAGKV+IGAFRTYPEGY+PPD+ SEYQ+IPL KIEDFGVHCK+YYSLD+++FKS LD
Sbjct: 176 TMSAGKVDIGAFRTYPEGYRPPDDVPSEYQSIPLAKIEDFGVHCKRYYSLDVSFFKSQLD 235
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
H+L LWN YW++TLSSSPL N +++ QI D+ +KL + +L + R
Sbjct: 236 AHILTSLWNSYWISTLSSSPLFSNVEFLNNQIQDINQKLSAVDKKLQLND---------R 286
Query: 303 RKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS------------------ 344
+ L K+ D+ + E G +S ++K +LF RQ+
Sbjct: 287 SVDGHEALMKVVTDAKAVGDELETGRISHLVKQLLF--ARQAGGGCGCSHASAGSPMDIA 344
Query: 345 -----TKTHAEPSDPEPMIE 359
K PS PEP +E
Sbjct: 345 VATEPEKAGPSPSAPEPAVE 364
>sp|Q4WZP2|CSN5_ASPFU COP9 signalosome complex subunit 5 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=csn5
PE=3 SV=2
Length = 334
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/348 (54%), Positives = 240/348 (68%), Gaps = 22/348 (6%)
Query: 6 AQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKI 65
AQ++WELEN I S+ P DA++ YDE +PW DPHYFK ++I
Sbjct: 4 AQQSWELENTI-SLIDP---------QRDALYRYDEETHKALSAARPWAKDPHYFKSIRI 53
Query: 66 SALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYM 125
SA+AL+KM +HARSGG++EVMGLMQG + +V DAF LPVEGTETRVNAQ +A EYM
Sbjct: 54 SAVALIKMTMHARSGGSLEVMGLMQGYILPETFVVTDAFRLPVEGTETRVNAQEEANEYM 113
Query: 126 VDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVS 185
V Y Q+ + AGR+ENAVGWYHSHPGYGCWLSGIDV+TQ + QQ PF+AVVIDP RT+S
Sbjct: 114 VSYLQSCRDAGRMENAVGWYHSHPGYGCWLSGIDVTTQDM-QQLGGPFVAVVIDPERTIS 172
Query: 186 AGKVEIGAFRTYPEGYKPPDE--PISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDC 243
AGKV+IGAFRT+P+ Y PP E +YQTIPL+K EDFG + QYYSL++++FKSSLD
Sbjct: 173 AGKVDIGAFRTFPKDYTPPKEGNEDEDYQTIPLSKAEDFGAYAHQYYSLEVSFFKSSLDT 232
Query: 244 HLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQL--SHSRYGPLIAPPP 301
LL LWNKYWV TLS SPL DY + Q+ DL++K+ +A + S SR G A P
Sbjct: 233 ELLSQLWNKYWVATLSQSPLFTTRDYGSRQMMDLSQKVRRAARGIESSGSRGG---ATTP 289
Query: 302 RRKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSTKTHA 349
+ D QL KI RD +I E+V GL++ +K LF + + T+T A
Sbjct: 290 K----DQQLEKIVRDGQRIVSEEVKGLLAAEVKMKLFQGIGEGTQTGA 333
>sp|Q4P804|CSN5_USTMA COP9 signalosome complex subunit 5 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=RRI1 PE=3 SV=1
Length = 406
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/398 (50%), Positives = 252/398 (63%), Gaps = 60/398 (15%)
Query: 10 WELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALA 69
+EL N I+ P +ST D+IF YD AQ +PW DPH+F++V+ISA+A
Sbjct: 17 FELNNAII-----PLSSTT----LDSIFAYDNEAQRAILHAQPWKTDPHFFQKVRISAVA 67
Query: 70 LLKMVVHARSGGTIEVMGLMQGKTD--GDAIIVMDAFALPVEGTETRVNAQADAYEYMVD 127
L+KMV+HARSGG E+MGLMQGK D + VMD+FALPVEGTETRVNAQ +AYEYMV
Sbjct: 68 LIKMVMHARSGGIYEIMGLMQGKIDVENRTLYVMDSFALPVEGTETRVNAQNEAYEYMVQ 127
Query: 128 YSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAG 187
Y +K+ GRLEN VGWYHSHPGYGCWLSGIDV+TQ NQQFQ+PF+A+VIDP RT+S+G
Sbjct: 128 YLDHSKEVGRLENVVGWYHSHPGYGCWLSGIDVNTQRTNQQFQDPFVAIVIDPNRTISSG 187
Query: 188 KVEIGAFRTYPEGY---KPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCH 244
KV+IGAFRT+PEGY SEYQ+IPL+KIEDFGVH +YY L++ +FKSSLD
Sbjct: 188 KVDIGAFRTFPEGYTSSSSIGGGDSEYQSIPLSKIEDFGVHANEYYPLEVEHFKSSLDGK 247
Query: 245 LLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQA------ENQLSHSRY----- 293
LLDLLWNKYW NTLS SPL+ N Y QI DLA+KL Q N +S + +
Sbjct: 248 LLDLLWNKYWQNTLSQSPLVSNRAYTTSQIRDLADKLAQTNAAVLNRNSVSSAPFTTTAG 307
Query: 294 --------GPLIAPPPRRK-----------------------EEDSQLAKITR---DSAK 319
G +A + E+ S+++ I+R D+AK
Sbjct: 308 AASVRIGAGKDVAAETEQNSGGSAKDTPAGTAQDAAGLVKEFEQRSKMSAISRASNDAAK 367
Query: 320 ITVEQVHGLMSQVIKDILFNSVRQSTKTHAEPSDPEPM 357
+ E HGL++ +K LF++ +T T A S P P+
Sbjct: 368 LASEANHGLLASQLKHTLFHN-HTATPTPASASAPTPI 404
>sp|Q5BBF1|CSN5_EMENI COP9 signalosome complex subunit 5 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=rri1 PE=1 SV=2
Length = 335
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/342 (52%), Positives = 230/342 (67%), Gaps = 25/342 (7%)
Query: 6 AQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKI 65
AQ +WELEN + ++ D+++ YDE +PW DPHYFK V+I
Sbjct: 4 AQLSWELENAVTLID----------PQRDSLYRYDEETHKYLSDTRPWTKDPHYFKSVRI 53
Query: 66 SALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYM 125
SA+ALLKMV+HARSGG++EVMGLMQG + +V DAF LPVEGTETRVNAQ +A EYM
Sbjct: 54 SAVALLKMVMHARSGGSLEVMGLMQGYILPNTFVVTDAFRLPVEGTETRVNAQDEANEYM 113
Query: 126 VDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVS 185
V Y Q+ ++AGR+ENAVGWYHSHPGYGCWLSGIDVSTQ + QQ PF+AVVIDP RT+S
Sbjct: 114 VSYLQSCREAGRMENAVGWYHSHPGYGCWLSGIDVSTQDM-QQMSGPFVAVVIDPERTIS 172
Query: 186 AGKVEIGAFRTYPEGYKPPDEPIS--EYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDC 243
AGKV+IGAFRT+P+ Y PP E EYQT+PLNK EDFG H YYSL+++ FKS+LD
Sbjct: 173 AGKVDIGAFRTFPKDYTPPKEEQEEDEYQTVPLNKAEDFGAHASHYYSLEVSLFKSALDT 232
Query: 244 HLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR- 302
+L LLWNKYWV TLS SPL DY + Q+ DL++K + + + PPR
Sbjct: 233 EILSLLWNKYWVATLSQSPLFTTRDYGSKQMLDLSQKTRRVARGIESN--------PPRG 284
Query: 303 ---RKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 341
+ D QL ++ +D +I E+V GL++ +K LF +
Sbjct: 285 GAPTQVRDQQLERVVKDGQRIVSEEVKGLLAAEVKMQLFQGI 326
>sp|Q4IJM4|CSN5_GIBZE COP9 signalosome complex subunit 5 OS=Gibberella zeae (strain PH-1
/ ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RRI1 PE=3
SV=1
Length = 340
Score = 362 bits (928), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 175/337 (51%), Positives = 231/337 (68%), Gaps = 11/337 (3%)
Query: 6 AQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKI 65
A K WEL+NN V + P DA++ +D AQ +E+PW DP +FK V+I
Sbjct: 5 ALKAWELDNN-VQLVDPK---------RDALYNFDADAQKAINKEQPWKQDPSHFKHVRI 54
Query: 66 SALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYM 125
SA AL+KM +HARSGG +EVMGLMQG T GD IV DAF LPVEGTETRVNAQ +A EY+
Sbjct: 55 SATALIKMTMHARSGGNLEVMGLMQGYTQGDTFIVTDAFRLPVEGTETRVNAQDEANEYI 114
Query: 126 VDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVS 185
V+Y + GR EN VGWYHSHPGYGCWLSGIDV T+ + QQFQ+PFLAVVIDP RT++
Sbjct: 115 VEYLDLCRAQGRQENVVGWYHSHPGYGCWLSGIDVDTEAMQQQFQDPFLAVVIDPDRTIN 174
Query: 186 AGKVEIGAFRTYPEGYKPPDEPISE-YQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCH 244
+GKV+IGAFRTYP YKP S+ +Q +PL K +FG H +YYSL++++FKSSLD H
Sbjct: 175 SGKVDIGAFRTYPADYKPSGGVTSDGFQAVPLAKAAEFGAHASRYYSLEVSHFKSSLDSH 234
Query: 245 LLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPRRK 304
LL+LLW+KYWV TLS +PL+ N DY Q+ DL+ K+++A ++ +R G + K
Sbjct: 235 LLELLWHKYWVQTLSQNPLITNRDYGNKQLLDLSSKIKEATTGITRNRAGQGMMMGMSTK 294
Query: 305 EEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 341
D + K+ +++ I ++ GL++ +K LFN +
Sbjct: 295 SSDKAVDKLAKEANLIASKERSGLIANQVKASLFNDL 331
>sp|P0CQ24|CSN5_CRYNJ COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=RRI1 PE=3 SV=1
Length = 371
Score = 353 bits (906), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 184/362 (50%), Positives = 234/362 (64%), Gaps = 35/362 (9%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
+S A+KT+E+ NN+ D SA AIF Y + E PW DPHYF
Sbjct: 2 ASTARKTFEINNNV---------QVVDPSA--AIFQYSREEEKLLDDEAPWRTDPHYFHT 50
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
VKISA+AL+KMV HARSGG E+MG+M GK +MD ALPV+GTETRVNA +A
Sbjct: 51 VKISAVALIKMVTHARSGGIYEIMGIMYGKVRDGTFWIMDVAALPVQGTETRVNAGNEAM 110
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYMV++ N +AG+ E GWYHSHPGYGCWLSGIDV+TQ+ NQ+F +P+LAVVIDP R
Sbjct: 111 EYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFNDPYLAVVIDPNR 170
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
TVSAGKVEIGAFRTYPEGY PP S+YQ+IP++KIEDFGVH YY L + +KS LD
Sbjct: 171 TVSAGKVEIGAFRTYPEGYTPPATGNSQYQSIPMDKIEDFGVHANAYYPLKVEIYKSKLD 230
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPP-P 301
+LDLLWNKYWV TLSS+ L+ N +Y Q+ DL KL A +S+S + P P
Sbjct: 231 EKMLDLLWNKYWVATLSSNSLVSNLEYSTSQVQDLNAKLRAASQSISNSSSKLKLKPTQP 290
Query: 302 RRK-----------------------EEDSQLAKITRDSAKITVEQVHGLMSQVIKDILF 338
K EE++ L K+T++S++IT E +G++SQ++K+ LF
Sbjct: 291 TTKGKETTEGSDKKLKKGEKEFSGVEEEETPLNKVTQESSRITSEAENGIISQLLKEKLF 350
Query: 339 NS 340
N+
Sbjct: 351 NT 352
>sp|P0CQ25|CSN5_CRYNB COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=RRI1 PE=3 SV=1
Length = 371
Score = 353 bits (906), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 184/362 (50%), Positives = 234/362 (64%), Gaps = 35/362 (9%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
+S A+KT+E+ NN+ D SA AIF Y + E PW DPHYF
Sbjct: 2 ASTARKTFEINNNV---------QVVDPSA--AIFQYSREEEKLLDDEAPWRTDPHYFHT 50
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
VKISA+AL+KMV HARSGG E+MG+M GK +MD ALPV+GTETRVNA +A
Sbjct: 51 VKISAVALIKMVTHARSGGIYEIMGIMYGKVRDGTFWIMDVAALPVQGTETRVNAGNEAM 110
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYMV++ N +AG+ E GWYHSHPGYGCWLSGIDV+TQ+ NQ+F +P+LAVVIDP R
Sbjct: 111 EYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFNDPYLAVVIDPNR 170
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
TVSAGKVEIGAFRTYPEGY PP S+YQ+IP++KIEDFGVH YY L + +KS LD
Sbjct: 171 TVSAGKVEIGAFRTYPEGYTPPATGNSQYQSIPMDKIEDFGVHANAYYPLKVEIYKSKLD 230
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPP-P 301
+LDLLWNKYWV TLSS+ L+ N +Y Q+ DL KL A +S+S + P P
Sbjct: 231 EKMLDLLWNKYWVATLSSNSLVSNLEYSTSQVQDLNAKLRAASQSISNSSSKLKLKPTQP 290
Query: 302 RRK-----------------------EEDSQLAKITRDSAKITVEQVHGLMSQVIKDILF 338
K EE++ L K+T++S++IT E +G++SQ++K+ LF
Sbjct: 291 TTKGKETTEGSDKKLKKGEKEFSGVEEEETPLNKVTQESSRITSEAENGIISQLLKEKLF 350
Query: 339 NS 340
N+
Sbjct: 351 NT 352
>sp|Q7RXX8|CSN5_NEUCR COP9 signalosome complex subunit 5 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=rri-1 PE=1 SV=1
Length = 336
Score = 347 bits (890), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 170/341 (49%), Positives = 222/341 (65%), Gaps = 11/341 (3%)
Query: 19 METPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHAR 78
ME PP D DA++ YD A +PW ND YFK V+IS++A++KMV+HAR
Sbjct: 1 MELPPNPGLVDVQ-RDALYAYDSEAHKAVVNSRPWTNDHKYFKTVRISSVAMIKMVMHAR 59
Query: 79 SGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRL 138
SGG +EVMG+MQG +G +++ DA+ LPVEGTETRVNAQ +A EYMV+Y + ++ RL
Sbjct: 60 SGGNLEVMGMMQGYIEGSTMVITDAYRLPVEGTETRVNAQDEANEYMVEYLRLCREENRL 119
Query: 139 ENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYP 198
EN +GWYHSHPGYGCWLSGIDV TQ L QQF EPF+AVVIDP RTVS KVEIGAFRT P
Sbjct: 120 ENVIGWYHSHPGYGCWLSGIDVGTQSLQQQFNEPFVAVVIDPDRTVSQNKVEIGAFRTIP 179
Query: 199 EGYKP---PDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWV 255
EG KP + + Q++PLNK+EDFG H +YY+LD+ +FKS+LD LL+ LWNKYWV
Sbjct: 180 EGIKPFAATNTTTGDGQSVPLNKVEDFGAHSHRYYALDVEHFKSTLDSKLLETLWNKYWV 239
Query: 256 NTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSH-SRYGPLIAPPPRRKEEDSQLAKIT 314
TL+ +PLL N DY + Q+ DL ++ +A L S G P+ D + K+
Sbjct: 240 QTLAQNPLLTNRDYTSSQMVDLGSRISKASKSLEMLSTTG---QRGPKSDAVDQNIEKLL 296
Query: 315 RDSAKITVEQVHGLMSQVIKDILFNSVRQSTKTHAEPSDPE 355
+ +I ++ GLM+ +K +F + AE PE
Sbjct: 297 SEVKQIAAKERSGLMAAEVKGKVFGC---GCRGQAEGVQPE 334
>sp|Q6C703|CSN5_YARLI COP9 signalosome complex subunit 5 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RRI1 PE=3 SV=1
Length = 354
Score = 324 bits (830), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 165/355 (46%), Positives = 225/355 (63%), Gaps = 27/355 (7%)
Query: 9 TWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISAL 68
T+++EN+IV +++ P D ++ YD+ Q PW DP YF+ V +S++
Sbjct: 6 TFQVENDIVDVDSTPQQGFD----RDDLYKYDDVEQKAILAAHPWRTDPSYFRNVLVSSI 61
Query: 69 ALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDY 128
AL+KM +HARSGG IEVMG+M GK + +VMD + LPVEGTETRVNAQ + E+MV+Y
Sbjct: 62 ALVKMAMHARSGGAIEVMGMMTGKILPNTFVVMDCYPLPVEGTETRVNAQQEGIEFMVEY 121
Query: 129 SQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGK 188
Q K GR EN VGWYHSHPGYGCWLSGIDV TQ NQQFQEPFLAVV+DP RT+SAGK
Sbjct: 122 LQGLKDVGRRENIVGWYHSHPGYGCWLSGIDVDTQFQNQQFQEPFLAVVVDPNRTISAGK 181
Query: 189 VEIGAFRTYPEGYKPPDEPISEY--QTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLL 246
VEIGAFRTYP+ YKPP + + Q++PL+K +D+G H ++YY LD+++FKSSLD +LL
Sbjct: 182 VEIGAFRTYPKDYKPPKKATKQNQDQSVPLSKAKDYGAHSERYYELDVSFFKSSLDENLL 241
Query: 247 DLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEK-------------------LEQAENQ 287
LLWNK W TLS S + N DY + + DL+EK +A ++
Sbjct: 242 QLLWNKNWAATLSQSTIQLNHDYTSKLMLDLSEKNAQLAIGLGEKTPQSQGRGFREAMSK 301
Query: 288 LSHSRYGPLIAPPPRRKEEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVR 342
+ + L+ + + E + + +D +I +++ GLMS I+ LF +
Sbjct: 302 ADNEPHTNLLNYSTKGQWE--AVNRSVKDGVQIGSDELQGLMSLEIQRRLFGRAK 354
>sp|Q6BMQ3|CSN5_DEBHA COP9 signalosome complex subunit 5 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RRI1 PE=3 SV=2
Length = 469
Score = 291 bits (746), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 140/258 (54%), Positives = 180/258 (69%), Gaps = 5/258 (1%)
Query: 38 FYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDA 97
F+ + + +PW ++ YFK+ IS+LAL KM VHA+SGG IEVMG+M GK ++
Sbjct: 38 FFSINSDESIMKARPWKSNAKYFKKTYISSLALCKMSVHAKSGGAIEVMGMMTGKIIKNS 97
Query: 98 IIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSG 157
IIVMD + LPVEGTETRVNAQA+ YEYMV Y + +KQ GR EN VGWYHSHPGYGCWLSG
Sbjct: 98 IIVMDVYPLPVEGTETRVNAQAEGYEYMVQYLENSKQVGRDENIVGWYHSHPGYGCWLSG 157
Query: 158 IDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDE--PISEYQTIP 215
IDV+TQ LNQ FQ+P+LA+VIDP +T GKVEIGAFRT+P+ YK PD P + + +P
Sbjct: 158 IDVATQSLNQNFQDPYLAIVIDPMKTEDQGKVEIGAFRTFPDNYKSPDSAAPTNNTRGVP 217
Query: 216 LNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNG--DYVAGQ 273
+K +DFGVH +YYSLDI FKS+LD +L+++ NK W+ L S N +
Sbjct: 218 PSKQKDFGVHSDKYYSLDIQIFKSNLDTEILNIISNKSWIGKLIKSVNTANHQEQNMIEN 277
Query: 274 ISDLAEKLEQAE-NQLSH 290
+ L KL++ E NQL+
Sbjct: 278 VFKLINKLQKKEVNQLNR 295
>sp|O94454|CSN5_SCHPO COP9 signalosome complex subunit 5 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=csn5 PE=1 SV=1
Length = 299
Score = 250 bits (639), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/243 (47%), Positives = 161/243 (66%), Gaps = 6/243 (2%)
Query: 34 DAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKT 93
+ +F +DE + +E PW +DP +F+ VKISA+ALLKM+ H G +EVMG +QGK
Sbjct: 6 ENVFRFDEEKERAKIRESPWKHDPEFFRSVKISAVALLKMLRHVSQGMPLEVMGYVQGKV 65
Query: 94 DGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGC 153
+G ++I++D+FALPVEGTETRVNA +A EY V Y K R EN +GWYHSHP YGC
Sbjct: 66 EGASLIILDSFALPVEGTETRVNAHEEAQEYSVQYHTLCKSVYRHENVIGWYHSHPNYGC 125
Query: 154 WLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEG------YKPPDEP 207
WLSG+DV TQ NQ++Q+PF+AVV+DP R++ + V IGAFRTYP G K P
Sbjct: 126 WLSGVDVETQRQNQKYQDPFVAVVLDPKRSLESPYVNIGAFRTYPVGNDGSIRTKSRHHP 185
Query: 208 ISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNG 267
++ +P +KIED G H + YYSL ITYF S + + + L N+ W +++ +L N
Sbjct: 186 SVLFKNLPSSKIEDAGAHAEAYYSLPITYFHSKAEKKVTEFLRNRNWSRSITECSILQNN 245
Query: 268 DYV 270
+++
Sbjct: 246 EFL 248
>sp|Q59PG6|CSN5_CANAL COP9 signalosome complex subunit 5 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=RRI1 PE=3 SV=1
Length = 213
Score = 201 bits (510), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 90/149 (60%), Positives = 112/149 (75%), Gaps = 3/149 (2%)
Query: 50 EKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVE 109
+KPW D +YF + IS+LAL+KM HA++GG+IE+MG++ GK G +IIVMD + LPVE
Sbjct: 62 KKPWKQDVNYFNKCYISSLALMKMCTHAQTGGSIEIMGMLVGKISGHSIIVMDTYRLPVE 121
Query: 110 GTETRVNAQADAYEYMVDYSQTNKQ---AGRLENAVGWYHSHPGYGCWLSGIDVSTQMLN 166
GTETRVNAQ +AY YMV+Y +Q EN VGWYH HP YGCWL GIDVSTQ LN
Sbjct: 122 GTETRVNAQNEAYTYMVEYLTERQQLSNGKNEENIVGWYHRHPRYGCWLKGIDVSTQSLN 181
Query: 167 QQFQEPFLAVVIDPTRTVSAGKVEIGAFR 195
Q Q+P+LA+V+DP +T+ GKVEIGAFR
Sbjct: 182 QGLQDPYLAIVVDPVKTLKQGKVEIGAFR 210
>sp|Q75E19|CSN5_ASHGO COP9 signalosome complex subunit 5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RRI1
PE=3 SV=1
Length = 420
Score = 198 bits (504), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 132/196 (67%), Gaps = 10/196 (5%)
Query: 43 AQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMD 102
+Q + QQE W DP YF++ +SALA +K++ HA GG +EV+G++ G + I+V+D
Sbjct: 54 SQVRVQQEL-WKQDPTYFQKAALSALACMKILRHAFDGGDMEVLGMLLGYVQDEMIVVVD 112
Query: 103 AFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVST 162
++ LPVEGTETRVNAQ ++YEY V Y +T G VGWYHSHPGYGCWLSGID T
Sbjct: 113 SYRLPVEGTETRVNAQMESYEYTVQYLETAVPEGLA--IVGWYHSHPGYGCWLSGIDAET 170
Query: 163 QMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDF 222
Q LNQ FQ+P+LA+V+DP R+ ++G ++IGAFRT PE +S + + +
Sbjct: 171 QTLNQNFQDPYLAIVVDPKRSKASGVIDIGAFRTMPE--TADTRSVSSH-----SNASRY 223
Query: 223 GVHCKQYYSLDITYFK 238
G H +YY L+++YF+
Sbjct: 224 GHHSARYYELEVSYFE 239
>sp|Q6CRJ8|CSN5_KLULA COP9 signalosome complex subunit 5 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=RRI1 PE=3 SV=1
Length = 373
Score = 177 bits (450), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 122/193 (63%), Gaps = 23/193 (11%)
Query: 56 DPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRV 115
+P +F++ IS LA KM+ HA GG IEVMG++ G T D I+V D ++LPV+GTETRV
Sbjct: 59 NPCHFQKCLISRLATTKMLSHAVDGGDIEVMGMLVGYTSNDMIVVKDCYSLPVQGTETRV 118
Query: 116 NAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLA 175
NA ++YEYMV Y + + + VGWYHSHPGYGCWLS ID+ TQ LNQ +Q+P+LA
Sbjct: 119 NAHMESYEYMVQY--LDAFVTKEDKIVGWYHSHPGYGCWLSNIDIQTQSLNQNYQDPYLA 176
Query: 176 VVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDIT 235
+V+DP +++S ++IGAFRT P K +E + YY L+I
Sbjct: 177 IVVDPKKSLSGNTLDIGAFRTLPS--KDNNEHVD-------------------YYPLNIQ 215
Query: 236 YFKSSLDCHLLDL 248
+++SLD ++ L
Sbjct: 216 LYQNSLDVNISKL 228
>sp|Q6FT36|CSN5_CANGA COP9 signalosome complex subunit 5 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RRI1 PE=3 SV=1
Length = 465
Score = 168 bits (425), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 111/176 (63%), Gaps = 11/176 (6%)
Query: 55 NDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETR 114
N P +++ V +S LA K++ HA GG IEVMG++ G G+ ++ D F LPVEGTET
Sbjct: 66 NSPLFYQNVLLSKLACSKILCHATKGGNIEVMGMLLGNVIGNTFVIFDCFELPVEGTETM 125
Query: 115 VNAQADAYEYMVDY--SQTNKQAGRLE---NAVGWYHSHPGYGCWLSGIDVSTQMLNQQF 169
VNA ++YEYMV + + R E N +GWYHSHPGY CWLS ID+ TQ LNQQ
Sbjct: 126 VNAHMESYEYMVQFYHEMVERSYTRNEENLNIIGWYHSHPGYDCWLSNIDMQTQSLNQQH 185
Query: 170 QEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTI----PLNKIED 221
Q+P+LA+V+DP ++ + KV IG+FRTY + + D E T LNK+E+
Sbjct: 186 QDPYLAIVVDPHKSKNDQKVRIGSFRTYQD--QNDDTNFYELNTTVFDSELNKLEN 239
>sp|A6ZXB7|CSN5_YEAS7 COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae
(strain YJM789) GN=RRI1 PE=3 SV=2
Length = 440
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 105/163 (64%), Gaps = 12/163 (7%)
Query: 44 QTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDA 103
+TK +Q+ D + V IS L+ K+ +A GG IE+MG++ G T D I+VMD
Sbjct: 54 KTKLKQQSS--TDIPSYTHVLISKLSCEKITHYAVRGGNIEIMGILMGFTLKDNIVVMDC 111
Query: 104 FALPVEGTETRVNAQADAYEYMVDY-----SQTNKQAGR-----LENAVGWYHSHPGYGC 153
F LPV GTETRVNAQ ++YEYMV Y + + GR N VGW+HSHPGY C
Sbjct: 112 FNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDC 171
Query: 154 WLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRT 196
WLS ID+ TQ LNQ+FQ+P++A+V+DP +++ + +GAFRT
Sbjct: 172 WLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFRT 214
>sp|B3LH96|CSN5_YEAS1 COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=RRI1 PE=3 SV=2
Length = 440
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 105/163 (64%), Gaps = 12/163 (7%)
Query: 44 QTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDA 103
+TK +Q+ D + V IS L+ K+ +A GG IE+MG++ G T D I+VMD
Sbjct: 54 KTKLKQQSS--TDIPSYTHVLISKLSCEKITHYAVRGGNIEIMGILMGFTLKDNIVVMDC 111
Query: 104 FALPVEGTETRVNAQADAYEYMVDY-----SQTNKQAGR-----LENAVGWYHSHPGYGC 153
F LPV GTETRVNAQ ++YEYMV Y + + GR N VGW+HSHPGY C
Sbjct: 112 FNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDC 171
Query: 154 WLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRT 196
WLS ID+ TQ LNQ+FQ+P++A+V+DP +++ + +GAFRT
Sbjct: 172 WLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFRT 214
>sp|Q12468|CSN5_YEAST COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RRI1 PE=1 SV=2
Length = 440
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 105/163 (64%), Gaps = 12/163 (7%)
Query: 44 QTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDA 103
+TK +Q+ D + V IS L+ K+ +A GG IE+MG++ G T D I+VMD
Sbjct: 54 KTKLKQQSS--TDIPSYTHVLISKLSCEKITHYAVRGGNIEIMGILMGFTLKDNIVVMDC 111
Query: 104 FALPVEGTETRVNAQADAYEYMVDY-----SQTNKQAGR-----LENAVGWYHSHPGYGC 153
F LPV GTETRVNAQ ++YEYMV Y + + GR N VGW+HSHPGY C
Sbjct: 112 FNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDC 171
Query: 154 WLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRT 196
WLS ID+ TQ LNQ+FQ+P++A+V+DP +++ + +GAFRT
Sbjct: 172 WLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFRT 214
>sp|Q86IJ1|PSDE_DICDI 26S proteasome non-ATPase regulatory subunit 14 OS=Dictyostelium
discoideum GN=psmD14 PE=3 SV=1
Length = 306
Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 153/305 (50%), Gaps = 27/305 (8%)
Query: 41 EGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAII 99
EG K P P + + IS+LALLKM+ HAR+G +EVMGLM G+ D I
Sbjct: 12 EGLGEKITDATPL---PDTAETIHISSLALLKMLQHARAGVPLEVMGLMLGELIDEYTIR 68
Query: 100 VMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGI 158
V+D FA+P GT V A ++ M+D KQ GR E +GWYHSHPG+GCWLS +
Sbjct: 69 VIDVFAMPQSGTSVSVEAIDPVFQTKMLDML---KQTGRDEIVIGWYHSHPGFGCWLSSV 125
Query: 159 DVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNK 218
DV+TQ +Q Q +AVV+DP ++V GKV I AFRT P EP T L
Sbjct: 126 DVNTQQSFEQLQSRAVAVVVDPLQSVR-GKVVIDAFRTIKTS--PTAEP--RQITSNLGH 180
Query: 219 IEDFGVHC------KQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAG 272
++D + + YYS+ I Y K+ L+ +L L K W L +
Sbjct: 181 LQDPSIQALIHGLNRNYYSIAINYRKNELEQKMLLNLHKKKWTEGLIVDKFDTHEQSNEK 240
Query: 273 QISDLAEKLEQAENQLSHSRYGPLIAPPPRRKEEDSQLAKITRDSAKITVEQVHGLMSQV 332
QI++L E +Q + + I P K+E S + K+ D + + VH LM+
Sbjct: 241 QINNLLELTKQYQKSIQDEDK---IEP---EKKEVSAVGKL--DPKRHLISDVHTLMANN 292
Query: 333 IKDIL 337
+ +L
Sbjct: 293 VVRVL 297
>sp|Q9LT08|PSDE_ARATH 26S proteasome non-ATPase regulatory subunit 14 OS=Arabidopsis
thaliana GN=RPN11 PE=2 SV=1
Length = 308
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 122/207 (58%), Gaps = 13/207 (6%)
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQA 119
++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A
Sbjct: 28 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVD 87
Query: 120 DAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + + +AVV+
Sbjct: 88 HVFQTNMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVV 144
Query: 179 DPTRTVSAGKVEIGAFRTY-PEGYKPPDEPISEYQTIP-LNK--IEDFGVHC--KQYYSL 232
DP ++V GKV I AFR+ P+ EP + LNK I+ +H + YYS+
Sbjct: 145 DPIQSVK-GKVVIDAFRSINPQTIMLGQEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSI 202
Query: 233 DITYFKSSLDCHLLDLLWNKYWVNTLS 259
I Y K+ L+ +L L K W + L+
Sbjct: 203 AINYRKNELEEKMLLNLHKKKWTDGLT 229
>sp|Q750E9|RPN11_ASHGO 26S proteasome regulatory subunit RPN11 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=RPN11 PE=3 SV=1
Length = 311
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 116/200 (58%), Gaps = 13/200 (6%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADA 121
V IS+LALLKM+ H+R+G +EVMGLM G D + V+D FA+P GT V A D
Sbjct: 32 VYISSLALLKMLKHSRAGVPMEVMGLMLGDFVDEYTVNVVDVFAMPQSGTGVSVEAVDDV 91
Query: 122 YE-YMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDP 180
++ M+D KQ GR + VGWYHSHPG+GCWLS +DV TQ +Q +AVV+DP
Sbjct: 92 FQAKMMDML---KQTGRDQMVVGWYHSHPGFGCWLSSVDVDTQRSFEQLNSRAVAVVVDP 148
Query: 181 TRTVSAGKVEIGAFRTY-PEGYKPPDEPISEYQTIP-LNK--IEDFGVHC--KQYYSLDI 234
++V GKV I AFR P EP + LNK I+ +H + YYSL+I
Sbjct: 149 IQSVK-GKVVIDAFRLISPATVVRNQEPRQTTSNVGLLNKPNIQSL-IHGLNRHYYSLNI 206
Query: 235 TYFKSSLDCHLLDLLWNKYW 254
Y K+S + ++L L + W
Sbjct: 207 DYHKTSAELNMLMNLHKEQW 226
>sp|Q9V3H2|PSDE_DROME 26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila
melanogaster GN=Rpn11 PE=1 SV=1
Length = 308
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 118/210 (56%), Gaps = 15/210 (7%)
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQA 119
++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A
Sbjct: 27 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVSVEAVD 86
Query: 120 DAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + E +AVV+
Sbjct: 87 PVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVV 143
Query: 179 DPTRTVSAGKVEIGAFRTY-PEGYKPPDEPISEYQTIPLNKIEDFGVHC------KQYYS 231
DP ++V GKV I AFR P EP T L ++ V + YYS
Sbjct: 144 DPIQSVK-GKVVIDAFRLINPNMLVLGQEP--RQTTSNLGHLQKPSVQALIHGLNRHYYS 200
Query: 232 LDITYFKSSLDCHLLDLLWNKYWVNTLSSS 261
+ I Y K+ L+ +L L K W + L+ S
Sbjct: 201 ISINYRKNELEQKMLLNLHKKSWKDGLTLS 230
>sp|O35593|PSDE_MOUSE 26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus
GN=Psmd14 PE=1 SV=2
Length = 310
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 128/234 (54%), Gaps = 16/234 (6%)
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQA 119
++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 120 DAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + E +AVV+
Sbjct: 89 PVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVV 145
Query: 179 DPTRTVSAGKVEIGAFRTYPEGY----KPPDEPISEYQTIPLNKIEDFGVHC--KQYYSL 232
DP ++V GKV I AFR P + S + I+ +H + YYS+
Sbjct: 146 DPIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSI 203
Query: 233 DITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAEN 286
I Y K+ L+ +L L K W+ L+ L ++ S + E LE A+N
Sbjct: 204 TINYRKNELEQKMLLNLHKKSWMEGLT---LQDYSEHCKHNESVVKEMLELAKN 254
>sp|O00487|PSDE_HUMAN 26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens
GN=PSMD14 PE=1 SV=1
Length = 310
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 128/234 (54%), Gaps = 16/234 (6%)
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQA 119
++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 120 DAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + E +AVV+
Sbjct: 89 PVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVV 145
Query: 179 DPTRTVSAGKVEIGAFRTYPEGY----KPPDEPISEYQTIPLNKIEDFGVHC--KQYYSL 232
DP ++V GKV I AFR P + S + I+ +H + YYS+
Sbjct: 146 DPIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSI 203
Query: 233 DITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAEN 286
I Y K+ L+ +L L K W+ L+ L ++ S + E LE A+N
Sbjct: 204 TINYRKNELEQKMLLNLHKKSWMEGLT---LQDYSEHCKHNESVVKEMLELAKN 254
>sp|Q6FKS1|RPN11_CANGA 26S proteasome regulatory subunit RPN11 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RPN11 PE=3 SV=1
Length = 306
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 114/200 (57%), Gaps = 13/200 (6%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADA 121
V IS++ALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A D
Sbjct: 27 VYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVNVVDVFAMPQSGTGVSVEAVDDV 86
Query: 122 YE-YMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDP 180
++ M+D KQ GR + VGWYHSHPG+GCWLS +DV+TQ +Q +AVV+DP
Sbjct: 87 FQARMMDML---KQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNNRAVAVVVDP 143
Query: 181 TRTVSAGKVEIGAFRTYPEGY----KPPDEPISEYQTIPLNKIEDFGVHC--KQYYSLDI 234
++V GKV I AFR G + P + S + I+ +H + YYSL+I
Sbjct: 144 IQSVK-GKVVIDAFRLIDTGALINNQEPRQTTSNSGLMNKANIQAL-IHGLNRHYYSLNI 201
Query: 235 TYFKSSLDCHLLDLLWNKYW 254
Y K+ + +L L + W
Sbjct: 202 DYHKTPAETKMLLNLHKEQW 221
>sp|P43588|RPN11_YEAST 26S proteasome regulatory subunit RPN11 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPN11 PE=1 SV=1
Length = 306
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 114/200 (57%), Gaps = 13/200 (6%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADA 121
V IS++ALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A D
Sbjct: 27 VYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAVDDV 86
Query: 122 YEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDP 180
++ M+D KQ GR + VGWYHSHPG+GCWLS +DV+TQ +Q +AVV+DP
Sbjct: 87 FQAKMMDML---KQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDP 143
Query: 181 TRTVSAGKVEIGAFRTYPEGY----KPPDEPISEYQTIPLNKIEDFGVHC--KQYYSLDI 234
++V GKV I AFR G P + S + I+ +H + YYSL+I
Sbjct: 144 IQSVK-GKVVIDAFRLIDTGALINNLEPRQTTSNTGLLNKANIQAL-IHGLNRHYYSLNI 201
Query: 235 TYFKSSLDCHLLDLLWNKYW 254
Y K++ + +L L + W
Sbjct: 202 DYHKTAKETKMLMNLHKEQW 221
>sp|P41883|YPT5_CAEEL Uncharacterized protein F37A4.5 OS=Caenorhabditis elegans
GN=F37A4.5 PE=3 SV=1
Length = 319
Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 120/229 (52%), Gaps = 22/229 (9%)
Query: 48 QQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFAL 106
+Q ++ P + V IS+LALLKM+ HARSG +EVMGLM G D I V D FA+
Sbjct: 14 KQATDKLDHPDTSETVNISSLALLKMLRHARSGIPLEVMGLMLGDFVDDYTINVTDVFAM 73
Query: 107 PVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLN 166
P GT V + Y+ + K GR EN VGWYHSHPG+GCWLS +DV+TQ
Sbjct: 74 PQSGTSVTVESVDPVYQ--TKHMDLLKLVGRTENVVGWYHSHPGFGCWLSSVDVNTQQSF 131
Query: 167 QQFQEPFLAVVIDPTRTVSAGKVEIGAFRTY-PEGYK-PPDEPISEYQTIPLNKIEDFG- 223
+ +AVV+DP ++V GKV + AFR+ P + P P +E P + G
Sbjct: 132 EALHPRAVAVVVDPIQSVK-GKVMLDAFRSVNPLNLQIRPLAPTAE----PRQTTSNLGH 186
Query: 224 ---------VH--CKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSS 261
VH +YYSL++ Y S + +L L K W + L+ S
Sbjct: 187 LTKPSLISVVHGLGTKYYSLNVAYRMGSNEQKMLMCLNKKSWYDQLNMS 235
>sp|O76577|PSDE_CAEEL 26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis
elegans GN=rpn-11 PE=1 SV=1
Length = 312
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 115/206 (55%), Gaps = 15/206 (7%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADA 121
V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A
Sbjct: 33 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGTGVSVEAVDPV 92
Query: 122 YEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDP 180
++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + + +AVV+DP
Sbjct: 93 FQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDP 149
Query: 181 TRTVSAGKVEIGAFRTY-PEGYKPPDEPISEYQTIPLNKIEDFGVHC------KQYYSLD 233
++V GKV I AFRT P+ EP T L ++ + + YYS+
Sbjct: 150 IQSVK-GKVVIDAFRTINPQSMALNQEP--RQTTSNLGHLQKPSIQALIHGLNRHYYSIP 206
Query: 234 ITYFKSSLDCHLLDLLWNKYWVNTLS 259
I Y L+ +L L W++ +S
Sbjct: 207 IAYRTHDLEQKMLLNLNKLSWMDAVS 232
>sp|P41878|RPN11_SCHPO 26S proteasome regulatory subunit rpn11 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rpn11 PE=1 SV=2
Length = 308
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 124/230 (53%), Gaps = 22/230 (9%)
Query: 41 EGAQ--TKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDA 97
+GA+ T ++P V++ V IS+LALLKM+ H R G +EVMGLM G+ D
Sbjct: 9 QGARMGTGMMGDQPLVDNSEC---VYISSLALLKMLRHGRHGTPMEVMGLMLGEFVDDFT 65
Query: 98 IIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLS 156
+ V+D FA+P GT V A ++ M+D KQ GR E VGWYHSHPG+GCWLS
Sbjct: 66 VRVVDVFAMPQSGTGVSVEAVDPVFQKNMMDML---KQTGRPEMVVGWYHSHPGFGCWLS 122
Query: 157 GIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTY-PEGYKPPDEPISEYQTIP 215
+D++TQ +Q +AVV+DP ++V GKV I AFR P EP +
Sbjct: 123 SVDINTQQSFEQLTPRAVAVVVDPIQSVK-GKVVIDAFRLINPSTLMMGQEPRQTTSNLG 181
Query: 216 -LNK------IEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTL 258
+NK I G H YYSL I Y K+ L+ +L L + W + L
Sbjct: 182 HINKPSIQALIHGLGRH---YYSLRINYKKTELEEIMLLNLHKQPWAHGL 228
>sp|Q8SQY3|RPN11_ENCCU 26S proteasome regulatory subunit RPN11 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=RPN11 PE=1 SV=1
Length = 294
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 145/290 (50%), Gaps = 41/290 (14%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADA 121
V+IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V +
Sbjct: 21 VQISSLALLKMLKHGRAGIPLEVMGLMLGEFVDEYTVKVVDVFAMPQSGTNVTVESVDPI 80
Query: 122 YEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPT 181
++ ++ K GR E VGWYHSHPG+GCWLS +D+STQ ++ + +AVV+DP
Sbjct: 81 FQ--MEMMSILKATGRHETVVGWYHSHPGFGCWLSTVDISTQQSFEKLCKRAVAVVVDPI 138
Query: 182 RTVSAGKVEIGAFRTYPE-----GYKPPD--EPISEYQTIPLNKIEDFGVHC--KQYYSL 232
++V GKV I AFR G +P I +T L I +H K YYS
Sbjct: 139 QSVK-GKVVIDAFRLIDNQLGVLGGEPRQVTSNIGYLKTPTLISI----IHGLNKHYYSF 193
Query: 233 DITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSR 292
+IT K+ + +L L K W + L ++ D+ K E+A
Sbjct: 194 NITCRKNDFEQKMLLNLHRKTWADNL--------------KLGDVRSKREEALK------ 233
Query: 293 YGPLIAPPPRRKEEDSQLAKITRDSAKI-TVEQVHGLMSQVIKDILFNSV 341
LI + EE+ LA D AK+ ++ L+ + + I+ N++
Sbjct: 234 ---LIESYGKAFEEEKNLAGKNPDMAKVGRIDYRRRLLEKCEESIMENTI 280
>sp|B5X8M4|BRCC3_SALSA Lys-63-specific deubiquitinase BRCC36 OS=Salmo salar GN=brcc3 PE=2
SV=1
Length = 260
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 18/146 (12%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFAL---------PVEGTET 113
V + + A L + HA S EVMGL G+ D + I+ + + + VE +
Sbjct: 6 VHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRVEISPE 65
Query: 114 RVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF 173
++++ A E + + + GR VGWYHSHP W S +DV TQ + Q + F
Sbjct: 66 QLSSAATEAERLAEMT------GRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGF 119
Query: 174 LAVVID---PTRTVSAGKVEIGAFRT 196
+ ++ + G+V F++
Sbjct: 120 VGLIFSCFIEDKNTKTGRVLYTCFQS 145
>sp|Q4VA72|BRCC3_XENTR Lys-63-specific deubiquitinase BRCC36 OS=Xenopus tropicalis
GN=brcc3 PE=2 SV=1
Length = 261
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
V I A L V H+ S EVMGL G+ D ++ + + + + + +
Sbjct: 6 VHIQGDAFLVCVTHSLSTEREEVMGLCIGEVDTQKVVHIHSVIILRRSDKRKDRVEISPE 65
Query: 123 EYMVDYSQTNKQA---GRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVV 177
+ ++ ++ A GR VGWYHSHP W S +DV TQ + Q F+ ++
Sbjct: 66 QLSAATTEADRLAEITGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDVGFVGLI 123
>sp|B6MUN4|MYSM1_BRAFL Histone H2A deubiquitinase MYSM1 OS=Branchiostoma floridae GN=MYSM1
PE=3 SV=1
Length = 809
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 14/125 (11%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
VKI A AL+ + +HA T EV+GL+ G D + A A P T + + D
Sbjct: 592 VKIHATALVTIDMHAHIS-TAEVIGLLGGVFHRDPGALEVASAEPCNSLSTGMQCEMDPV 650
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQE-------PFLA 175
S+ QAG + VGWYHSHP + S D+ TQ +FQE PF+
Sbjct: 651 S-QTQASEALSQAGY--SVVGWYHSHPTFAPNPSVRDIETQT---KFQEWFAQGGSPFIG 704
Query: 176 VVIDP 180
++++P
Sbjct: 705 IIVNP 709
>sp|Q66GV6|BRCC3_XENLA Lys-63-specific deubiquitinase BRCC36 OS=Xenopus laevis GN=brcc3
PE=2 SV=1
Length = 261
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
V I A L V H+ S EVMGL G+ D ++ + + + + + +
Sbjct: 6 VHIQGDAFLVCVTHSLSTEREEVMGLCIGEVDTQKLVHIHSVIILRRSDKRKDRVEISPE 65
Query: 123 EYMVDYSQTNKQA---GRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVV 177
+ + ++ A GR VGWYHSHP W S +DV TQ + Q F+ ++
Sbjct: 66 QLSAATIEADRLADITGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDVGFVGLI 123
>sp|Q54Q40|D1039_DICDI Probable ubiquitin thioesterase DG1039 OS=Dictyostelium discoideum
GN=DG1039 PE=3 SV=1
Length = 715
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 58/149 (38%), Gaps = 35/149 (23%)
Query: 70 LLKMVVHAR------------SGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNA 117
L K++VH + +IE G++ G D + EGT N
Sbjct: 534 LRKIIVHGEVFQEFMRLAENNTKRSIETCGILSGTLSNDVFRITTIIIPKQEGTTDTCNT 593
Query: 118 --QADAYEYMVDYSQTNKQAGRLEN---AVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEP 172
+ + +EY +LEN +GW H+HP C+LS +DV T Q +
Sbjct: 594 IEEHEIFEY------------QLENDLLTLGWIHTHPTQDCFLSAVDVHTHCSYQYLLQE 641
Query: 173 FLAVVIDPTRTVSAGKVEIGAFR-TYPEG 200
+AVVI P G FR T P G
Sbjct: 642 AIAVVISP-----MANPNFGIFRLTDPPG 665
>sp|Q5VVJ2|MYSM1_HUMAN Histone H2A deubiquitinase MYSM1 OS=Homo sapiens GN=MYSM1 PE=1 SV=1
Length = 828
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 25/171 (14%)
Query: 16 IVSMETP-PTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMV 74
+ S++ P PT S+ D F+ E Q FQ VK+++ ALL M
Sbjct: 543 VKSLKVPRPTKSSFDPFQLIPCNFFSEEKQEPFQ--------------VKVASEALLIMD 588
Query: 75 VHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQ 134
+HA EV+GL+ G+ +V A P T + + D V +Q ++
Sbjct: 589 LHAHVS-MAEVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCEMDP----VSQTQASET 643
Query: 135 -AGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQF----QEPFLAVVIDP 180
A R + +GWYHSHP + S D+ TQ Q + F+ +++ P
Sbjct: 644 LAVRGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSP 694
>sp|P68355|CSN5B_BRAOL COP9 signalosome complex subunit 5b (Fragments) OS=Brassica
oleracea GN=CSN5B PE=1 SV=1
Length = 78
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 39/51 (76%), Gaps = 8/51 (15%)
Query: 202 KPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNK 252
K D+ +SEYQTIPLNK KQYYSLDITYFKSSLD HLLDLLWNK
Sbjct: 23 KISDDHVSEYQTIPLNK--------KQYYSLDITYFKSSLDSHLLDLLWNK 65
>sp|A0JMR6|MYSM1_XENLA Histone H2A deubiquitinase MYSM1 OS=Xenopus laevis GN=mysm1 PE=2
SV=1
Length = 818
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 12/125 (9%)
Query: 62 RVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQAD 120
+VK+S A+L + +HA EV+GL+ G+ T+ ++++ + A P T + + D
Sbjct: 547 QVKVSCEAMLVLDLHAHVS-MAEVIGLLGGRYTESESVVEICAVE-PCNSLSTGLQCEMD 604
Query: 121 AYEYMVDYSQTNKQ-AGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQF----QEPFLA 175
V +Q ++ A R + +GWYHSHP + S D+ TQ Q + FL
Sbjct: 605 P----VSQTQASEALASRGYSVIGWYHSHPAFDPNPSIRDIDTQAKYQNYFSRGGAKFLG 660
Query: 176 VVIDP 180
++I P
Sbjct: 661 MIISP 665
>sp|Q69Z66|MYSM1_MOUSE Histone H2A deubiquitinase MYSM1 OS=Mus musculus GN=Mysm1 PE=2 SV=2
Length = 819
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 38 FYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGD 96
F+ E Q FQ VK++A ALL M +HA EV+GL+ G+ ++ D
Sbjct: 557 FFSEEKQEPFQ--------------VKVAAEALLIMNLHAHVS-MAEVIGLLGGRYSEAD 601
Query: 97 AIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQ-AGRLENAVGWYHSHPGYGCWL 155
++ + A A P T + + D V +Q ++ A R + +GWYHSHP +
Sbjct: 602 KVLEVCA-AEPCNSLSTGLQCEMDP----VSQTQASETLALRGYSVIGWYHSHPAFDPNP 656
Query: 156 SGIDVSTQMLNQQF----QEPFLAVVIDP 180
S D+ TQ Q + F+ +++ P
Sbjct: 657 SLRDIDTQAKYQSYFSRGGAKFIGMIVSP 685
>sp|Q54Z40|MYBH_DICDI Myb-like protein H OS=Dictyostelium discoideum GN=mybH PE=3 SV=1
Length = 1217
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 19/133 (14%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
+ +S+ ++ M +H+ T EV+G++ GK + D + A+P + + D
Sbjct: 778 IDVSSNTMIVMDIHSHISST-EVIGMLGGKFNPDTNHITILLAIPCNSISSDIQCDMDPN 836
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQF------------- 169
+ N + VGWYHSHP + S D+ TQ Q
Sbjct: 837 SQIAAKEMVNSIGLDI---VGWYHSHPNFEPIPSLRDIETQTSFQNLFATSSNNNNNNNK 893
Query: 170 --QEPFLAVVIDP 180
EPF+ +++P
Sbjct: 894 SMIEPFIGFIVNP 906
>sp|Q5F3F2|MYSM1_CHICK Histone H2A deubiquitinase MYSM1 OS=Gallus gallus GN=MYSM1 PE=2
SV=1
Length = 832
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 12/125 (9%)
Query: 62 RVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQAD 120
+VK+S+ ALL M +H+ EV+GL+ G+ ++ D ++ + A A P T + + D
Sbjct: 578 QVKVSSEALLIMDLHSHVS-MAEVIGLLGGRYSEADKVVEVCA-AEPCNSLSTGLQCEMD 635
Query: 121 AYEYMVDYSQTNKQ-AGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQF----QEPFLA 175
V +Q ++ A R + +GWYHSHP + S D+ TQ Q + F+
Sbjct: 636 P----VSQTQASETLAARGYSVIGWYHSHPAFDPNPSIRDIDTQAKYQSYFSRGGAMFIG 691
Query: 176 VVIDP 180
+++ P
Sbjct: 692 MIVSP 696
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 137,079,442
Number of Sequences: 539616
Number of extensions: 5654777
Number of successful extensions: 10277
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 10113
Number of HSP's gapped (non-prelim): 94
length of query: 360
length of database: 191,569,459
effective HSP length: 119
effective length of query: 241
effective length of database: 127,355,155
effective search space: 30692592355
effective search space used: 30692592355
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)