Your job contains 1 sequence.
>018131
MEFHLLPILAFLSLALVASHADISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNV
GKGGVNVDAGKGKPGGGTHVNVGGKGVGVNTGKPDKRTSVGVGKGGVSVSTGHKGKPVYV
GVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTP
FSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG
KSVQAISTEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVP
LEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPNKKTGE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018131
(360 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2179424 - symbol:RD22 "RESPONSIVE TO DESSICATI... 808 2.3e-95 2
UNIPROTKB|Q70KG3 - symbol:RAFTIN1B "Protein RAFTIN 1B" sp... 471 5.4e-51 2
UNIPROTKB|Q7F8U7 - symbol:BURP13 "BURP domain-containing ... 454 7.7e-50 2
UNIPROTKB|Q70KG5 - symbol:RAFTIN1A "Protein RAFTIN 1A" sp... 455 4.2e-49 2
TAIR|locus:2010237 - symbol:USPL1 "AT1G49320" species:370... 394 1.3e-36 1
TAIR|locus:2195593 - symbol:PG1 "AT1G60390" species:3702 ... 342 2.0e-30 1
TAIR|locus:2016194 - symbol:PG2 "AT1G70370" species:3702 ... 330 4.2e-29 1
TAIR|locus:2034823 - symbol:JP630 "AT1G23760" species:370... 327 8.8e-29 1
>TAIR|locus:2179424 [details] [associations]
symbol:RD22 "RESPONSIVE TO DESSICATION 22" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] [GO:0009269 "response to desiccation"
evidence=IEP;RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP;RCA] [GO:0045735 "nutrient reservoir activity"
evidence=TAS] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0005768
"endosome" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AC006601
GO:GO:0005768 GO:GO:0009651 GO:GO:0005802 HOGENOM:HOG000238251
InterPro:IPR004873 Pfam:PF03181 PROSITE:PS51277 SMART:SM01045
EMBL:D10703 EMBL:AY090244 EMBL:AY060560 EMBL:BT009697
IPI:IPI00529761 PIR:S34823 RefSeq:NP_197943.1 UniGene:At.23701
STRING:Q08298 PaxDb:Q08298 PRIDE:Q08298 EnsemblPlants:AT5G25610.1
GeneID:832636 KEGG:ath:AT5G25610 TAIR:At5g25610 eggNOG:NOG244743
InParanoid:Q08298 OMA:HVRAVST PhylomeDB:Q08298
ProtClustDB:CLSN2916419 Genevestigator:Q08298 GermOnline:AT5G25610
Uniprot:Q08298
Length = 392
Score = 808 (289.5 bits), Expect = 2.3e-95, Sum P(2) = 2.3e-95
Identities = 170/312 (54%), Positives = 198/312 (63%)
Query: 56 TSVNVGKGGVNVDAGKX-----XXXXXXXXXXXXXXXXXXXXXXDKRXXXXXXXXXXXXX 110
T+VNVGKGGV VD GK KR
Sbjct: 78 TAVNVGKGGVRVDTGKGKPGGGTHVSVGSGKGHGGGVAVHTGKPGKRTDVGVGKGGVTVH 137
Query: 111 XXXXXXPVYVGV----SPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSN 166
P+YVGV +PF Y YAA E QLHDDPN ALFFLEKDL G +MN+ F
Sbjct: 138 TRHKGRPIYVGVKPGANPFVYNYAAKETQLHDDPNAALFFLEKDLVRGKEMNVRFNAEDG 197
Query: 167 --GAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKY 223
G T FL R A++ PF S+K E +FSV+ GS EAE+M+ TI+ECE + GE+KY
Sbjct: 198 YGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKY 257
Query: 224 CATSLESMIDFSTSKLGK-SVQAISTEV-KKGTKMQTYTIAA-GVKQMAADKSVVCHKQN 280
CATSLESM+DFS SKLGK V+A+STEV KK MQ Y IAA GVK+++ DKSVVCHKQ
Sbjct: 258 CATSLESMVDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAAGVKKLSDDKSVVCHKQK 317
Query: 281 YPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVP 340
YP+AVFYCH T Y VPLEG +G +AKA AVCH +TSAWNP HLAF+VLKVKPGTVP
Sbjct: 318 YPFAVFYCHKAMMTTVYAVPLEGENGMRAKAVAVCHKNTSAWNPNHLAFKVLKVKPGTVP 377
Query: 341 ICHFLPEDHIVW 352
+CHFLPE H+VW
Sbjct: 378 VCHFLPETHVVW 389
Score = 160 (61.4 bits), Expect = 2.3e-95, Sum P(2) = 2.3e-95
Identities = 30/55 (54%), Positives = 41/55 (74%)
Query: 17 VASHADISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNVGKGGVNVDAGK 71
VA AD++PE YW T LPN+P+P ++ +LL D ++KST+V VGKGGVNV+ K
Sbjct: 17 VAIAADLTPERYWSTALPNTPIPNSLHNLLTFDFTDEKSTNVQVGKGGVNVNTHK 71
>UNIPROTKB|Q70KG3 [details] [associations]
symbol:RAFTIN1B "Protein RAFTIN 1B" species:4565 "Triticum
aestivum" [GO:0009555 "pollen development" evidence=ISS]
[GO:0043668 "exine" evidence=IDA] GO:GO:0009555 GO:GO:0043668
InterPro:IPR004873 Pfam:PF03181 PROSITE:PS51277 EMBL:AJ575664
EMBL:AJ575665 UniGene:Ta.4176 Gramene:Q70KG3 Uniprot:Q70KG3
Length = 362
Score = 471 (170.9 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 92/220 (41%), Positives = 129/220 (58%)
Query: 142 TALFFLEKDLHPGMKMNLHFTQTSNGAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSV 200
T +FF E+ + G ++ HF + A FL RQ A S PF++ LP I F + S
Sbjct: 139 TTVFFHEEAVRVGRRLPFHFPPATPAALGFLPRQVADSVPFTTAALPGILATFGIASDST 198
Query: 201 EAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQT 258
M+ T++ CE P I GE K+CATSLE++++ + LG + ++ + ST + G +QT
Sbjct: 199 TVPSMEATLRACESPTIAGESKFCATSLEALVERAMGVLGTRDIRPVTSTLPRAGAPLQT 258
Query: 259 YTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKA-AAVCHT 317
YT+ A V CH + YPY V+ CH T +RAY V +EGA G A AAVCHT
Sbjct: 259 YTVVAVQPVEGGPVFVACHDEAYPYTVYRCHTTGPSRAYTVDMEGARGADAVTIAAVCHT 318
Query: 318 DTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPNKK 357
DTS WNP+H++F++L KPG P+CH +P HI+W N K
Sbjct: 319 DTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIWAKNVK 358
Score = 76 (31.8 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 21 ADISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKS 55
A + E++W+ VLP+SP+P AV LL+ E S
Sbjct: 26 APATGEVFWRAVLPHSPLPDAVLRLLKQPAAESTS 60
>UNIPROTKB|Q7F8U7 [details] [associations]
symbol:BURP13 "BURP domain-containing protein 13"
species:39947 "Oryza sativa Japonica Group" [GO:0009555 "pollen
development" evidence=IMP] [GO:0043668 "exine" evidence=ISS]
GO:GO:0009555 EMBL:AP008214 EMBL:AJ575667 EMBL:AJ575668
EMBL:AP000364 EMBL:AP005148 RefSeq:NP_001062137.1 UniGene:Os.49777
EnsemblPlants:LOC_Os08g38810.2 GeneID:4345929
KEGG:dosa:Os08t0496800-01 KEGG:osa:4345929 Gramene:Q7F8U7
eggNOG:NOG261790 HOGENOM:HOG000238251 ProtClustDB:CLSN2919903
GO:GO:0043668 InterPro:IPR004873 Pfam:PF03181 PROSITE:PS51277
Uniprot:Q7F8U7
Length = 412
Score = 454 (164.9 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 92/224 (41%), Positives = 135/224 (60%)
Query: 142 TALFFLEKDLHPGMKMNLHF-TQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSV 200
T +FF E+ + G ++ +F T++ FL R+ A S PF++ LP + F V P +
Sbjct: 187 TTVFFHEEAVRVGERLPFYFPAATTSALGFLPRRVADSIPFTAAALPAVLALFGVAPDTA 246
Query: 201 EAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQT 258
EA M+ T++ CE P + GE K+CATSLE++++ + + LG + + A+ ST + G +Q
Sbjct: 247 EAAGMRETLRTCEWPTLAGESKFCATSLEALVEGAMAALGTRDIAALASTLPRGGAPLQA 306
Query: 259 YTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEG---ADGTKA-KAAAV 314
Y + A V + V CH Q YPY V+ CH T RAYMV +EG DG +A A V
Sbjct: 307 YAVRA-VLPVEGAGFVACHDQAYPYTVYRCHTTGPARAYMVEMEGDGGGDGGEAVTVATV 365
Query: 315 CHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPNKKT 358
CHT+TS WNP+H++F++L KPG P+CH +P HIVW N K+
Sbjct: 366 CHTNTSRWNPEHVSFKLLGTKPGGSPVCHLMPYGHIVWAKNVKS 409
Score = 82 (33.9 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 17 VASHADISP---ELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNVGK 62
V S D +P E++W+ VLP SP+P A LL+PD TS VGK
Sbjct: 17 VLSLGDAAPSTAEVFWRAVLPESPLPDAFLRLLRPD------TSFVVGK 59
>UNIPROTKB|Q70KG5 [details] [associations]
symbol:RAFTIN1A "Protein RAFTIN 1A" species:4565 "Triticum
aestivum" [GO:0009555 "pollen development" evidence=ISS]
[GO:0043668 "exine" evidence=IDA] GO:GO:0009555 GO:GO:0043668
InterPro:IPR004873 Pfam:PF03181 PROSITE:PS51277 EMBL:AJ575662
EMBL:AJ575663 UniGene:Ta.56095 Gramene:Q70KG5 Uniprot:Q70KG5
Length = 389
Score = 455 (165.2 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 89/218 (40%), Positives = 127/218 (58%)
Query: 142 TALFFLEKDLHPGMKMNLHFTQTSNGAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSV 200
T +FF E+ + G ++ F + A FL RQ A S PF++ LP + F V S
Sbjct: 166 TTVFFHEEAVRVGKRLPFRFPPATPAALGFLPRQVADSVPFTTAALPGVLATFGVASDSA 225
Query: 201 EAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQT 258
M+ T++ CE P I GE K+CATSLE++++ + LG + ++ + ST + G +QT
Sbjct: 226 TVASMEATLRACESPTIAGESKFCATSLEALVERAMEVLGTRDIRPVTSTLPRAGAPLQT 285
Query: 259 YTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKA-AAVCHT 317
YT+ + V CH + YPY V+ CH T +RAYMV +EGA G A A VCHT
Sbjct: 286 YTVRSVRPVEGGPVFVACHDEAYPYTVYRCHTTGPSRAYMVDMEGARGGDAVTIATVCHT 345
Query: 318 DTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 355
DTS WNP+H++F++L KPG P+CH +P HI+W N
Sbjct: 346 DTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIWAKN 383
Score = 74 (31.1 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 21 ADISPELYWKTVLPNSPMPKAVKDLL-QP 48
A + E++W+ VLP+SP+P AV LL QP
Sbjct: 26 APATAEVFWRAVLPHSPLPDAVLRLLKQP 54
>TAIR|locus:2010237 [details] [associations]
symbol:USPL1 "AT1G49320" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
"extracellular region" evidence=ISM] [GO:0000326 "protein storage
vacuole" evidence=IDA] [GO:0048316 "seed development" evidence=IMP]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0048316
HOGENOM:HOG000238251 InterPro:IPR004873 Pfam:PF03181
PROSITE:PS51277 EMBL:AC007504 GO:GO:0000326 SMART:SM01045
EMBL:BT006428 EMBL:AK227709 IPI:IPI00529467 PIR:D96529
RefSeq:NP_175357.1 UniGene:At.38248 STRING:Q9XI99
EnsemblPlants:AT1G49320.1 GeneID:841355 KEGG:ath:AT1G49320
TAIR:At1g49320 eggNOG:NOG262339 InParanoid:Q9XI99 OMA:MEPRSAP
PhylomeDB:Q9XI99 ProtClustDB:CLSN2682476 Genevestigator:Q9XI99
Uniprot:Q9XI99
Length = 280
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 82/228 (35%), Positives = 128/228 (56%)
Query: 138 DDPNTALFFLEKDLHPGMKMNLHFTQTS--NGATFLSRQAAKSTPFSSDKLPEIFNQFSV 195
DDP+ ++F DL G K+ ++F + L+RQ A PF+ KL + + FS+
Sbjct: 51 DDPSLYMYFTLNDLKLGTKLLIYFYKNDLQKLPPLLTRQQADLIPFTKSKLDFLLDHFSI 110
Query: 196 KPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSV--QAISTEVKKG 253
S + + ++ T+ C+ I+GE K+C TSLES+ID +G +V + ++T+V
Sbjct: 111 TKDSPQGKAIKETLGHCDAKAIEGEHKFCGTSLESLIDLVKKTMGYNVDLKVMTTKVMVP 170
Query: 254 TK------MQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQT-TRAYMVPLEGADG 306
+ + YT K++ K + CH+ YPYAV+YCH + +R + V L DG
Sbjct: 171 AQNSISYALHNYTFVEAPKELVGIKMLGCHRMPYPYAVYYCHGHKGGSRVFEVNLVTDDG 230
Query: 307 T-KAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWV 353
+ AVCH DTS W+ H+AF+VLK++P + P+CHF P D+IVWV
Sbjct: 231 RQRVVGPAVCHMDTSTWDADHVAFKVLKMEPRSAPVCHFFPLDNIVWV 278
>TAIR|locus:2195593 [details] [associations]
symbol:PG1 "AT1G60390" species:3702 "Arabidopsis
thaliana" [GO:0004650 "polygalacturonase activity" evidence=ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005618 GO:GO:0048046
eggNOG:NOG12793 InterPro:IPR004873 Pfam:PF03181 PROSITE:PS51277
EMBL:AC004473 HOGENOM:HOG000082581 ProtClustDB:CLSN2679742
SMART:SM01045 EMBL:AK227564 IPI:IPI00527546 PIR:T02289
RefSeq:NP_176242.1 UniGene:At.36663 PaxDb:O80760 PRIDE:O80760
EnsemblPlants:AT1G60390.1 GeneID:842334 KEGG:ath:AT1G60390
TAIR:At1g60390 InParanoid:O80760 OMA:NGRTHEF PhylomeDB:O80760
Genevestigator:O80760 GermOnline:AT1G60390 Uniprot:O80760
Length = 624
Score = 342 (125.4 bits), Expect = 2.0e-30, P = 2.0e-30
Identities = 76/212 (35%), Positives = 104/212 (49%)
Query: 145 FFLEKDLHPGMKMNL-HFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAE 203
FF E L G M + TFL R K+ PFSS + EI+ F S A
Sbjct: 409 FFREAMLKEGTLMQMPDIKDKMPKRTFLPRNIVKNLPFSSSTIGEIWRVFGAGENSSMAG 468
Query: 204 IMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYTIAA 263
I+ + + ECE P GE K C S E MIDF+TS LG+ V +TE G+K +
Sbjct: 469 IISSAVSECERPASHGETKRCVGSAEDMIDFATSVLGRGVVVRTTENVVGSKKKVVIGKV 528
Query: 264 -GVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKA--KAAAVCHTDTS 320
G+ ++V CH+ YPY ++YCH+ R Y L + A+CH DTS
Sbjct: 529 NGINGGDVTRAVSCHQSLYPYLLYYCHSVPRVRVYETDLLDPKSLEKINHGVAICHIDTS 588
Query: 321 AWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 352
AW+P H AF L PG + +CH++ E+ + W
Sbjct: 589 AWSPSHGAFLALGSGPGQIEVCHWIFENDMTW 620
>TAIR|locus:2016194 [details] [associations]
symbol:PG2 "AT1G70370" species:3702 "Arabidopsis
thaliana" [GO:0004650 "polygalacturonase activity" evidence=ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0000271 "polysaccharide
biosynthetic process" evidence=RCA] [GO:0000272 "polysaccharide
catabolic process" evidence=RCA] [GO:0005982 "starch metabolic
process" evidence=RCA] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0008361 "regulation of cell size" evidence=RCA]
[GO:0009664 "plant-type cell wall organization" evidence=RCA]
[GO:0009825 "multidimensional cell growth" evidence=RCA]
[GO:0009832 "plant-type cell wall biogenesis" evidence=RCA]
[GO:0009926 "auxin polar transport" evidence=RCA] [GO:0009932 "cell
tip growth" evidence=RCA] [GO:0010015 "root morphogenesis"
evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0010817 "regulation of hormone levels"
evidence=RCA] [GO:0040007 "growth" evidence=RCA] [GO:0043481
"anthocyanin accumulation in tissues in response to UV light"
evidence=RCA] [GO:0048653 "anther development" evidence=RCA]
[GO:0048767 "root hair elongation" evidence=RCA] [GO:0071555 "cell
wall organization" evidence=RCA] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005618 GO:GO:0048046
InterPro:IPR004873 Pfam:PF03181 PROSITE:PS51277 EMBL:AC003671
eggNOG:NOG150783 HOGENOM:HOG000082581 ProtClustDB:CLSN2679742
EMBL:U63373 EMBL:AY056388 EMBL:BT000514 EMBL:AF083752
IPI:IPI00543774 PIR:T01485 RefSeq:NP_001185361.1 RefSeq:NP_177194.1
UniGene:At.10202 UniGene:At.73052 UniGene:At.75232 STRING:P92990
PaxDb:P92990 PRIDE:P92990 EnsemblPlants:AT1G70370.1
EnsemblPlants:AT1G70370.2 GeneID:843373 KEGG:ath:AT1G70370
GeneFarm:5152 TAIR:At1g70370 InParanoid:P92990 OMA:GEVEVCH
PhylomeDB:P92990 Genevestigator:P92990 GermOnline:AT1G70370
Uniprot:P92990
Length = 626
Score = 330 (121.2 bits), Expect = 4.2e-29, P = 4.2e-29
Identities = 76/212 (35%), Positives = 103/212 (48%)
Query: 145 FFLEKDLHPGMKMNL-HFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAE 203
FF E L G + + +FL R PFS+ KL EI F S
Sbjct: 411 FFRESSLKEGTVIPMPDIKDKMPKRSFLPRSIITKLPFSTSKLGEIKRIFHAVENSTMGG 470
Query: 204 IMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYTIAA 263
I+ + + ECE P GE K C S E MIDF+TS LG+SV +TE G+K +
Sbjct: 471 IITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSVVLRTTENVAGSKEKVVIGKV 530
Query: 264 -GVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKA--KAAAVCHTDTS 320
G+ K+V CH+ YPY ++YCH+ R Y L + K A+CH DTS
Sbjct: 531 NGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHMDTS 590
Query: 321 AWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 352
+W P H AF L KPG + +CH++ E+ + W
Sbjct: 591 SWGPSHGAFLALGSKPGRIEVCHWIFENDMNW 622
>TAIR|locus:2034823 [details] [associations]
symbol:JP630 "AT1G23760" species:3702 "Arabidopsis
thaliana" [GO:0004650 "polygalacturonase activity" evidence=ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0010413 "glucuronoxylan
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005618 GO:GO:0048046 EMBL:AC005990 InterPro:IPR004873
Pfam:PF03181 PROSITE:PS51277 EMBL:U59467 IPI:IPI00531267 PIR:G86371
RefSeq:NP_173788.1 UniGene:At.24878 PaxDb:P92982 PRIDE:P92982
EnsemblPlants:AT1G23760.1 GeneID:838987 KEGG:ath:AT1G23760
GeneFarm:5151 TAIR:At1g23760 eggNOG:NOG150783 HOGENOM:HOG000082581
InParanoid:P92982 OMA:PFSTSKI PhylomeDB:P92982
ProtClustDB:CLSN2679742 Genevestigator:P92982 GermOnline:AT1G23760
SMART:SM01045 Uniprot:P92982
Length = 622
Score = 327 (120.2 bits), Expect = 8.8e-29, P = 8.8e-29
Identities = 71/188 (37%), Positives = 98/188 (52%)
Query: 169 TFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSL 228
+FL R PFS+ K+ EI F S I+ + ++ECE P E K C S
Sbjct: 432 SFLPRSIVSKLPFSTSKIAEIKRVFHANDNSTMEGIITDAVRECERPPTVSETKRCVGSA 491
Query: 229 ESMIDFSTSKLGKSVQAISTEVKKGTKMQTYTIAA-GVKQMAADKSVVCHKQNYPYAVFY 287
E MIDF+TS LG+SV +TE G+K + G+ KSV CH+ YPY ++Y
Sbjct: 492 EDMIDFATSVLGRSVVLRTTESVAGSKEKVMIGKVNGINGGRVTKSVSCHQSLYPYLLYY 551
Query: 288 CHATQTTRAYMVPLEGADGTKAK---AAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHF 344
CH+ R Y L +KAK A+CH DTSAW H AF +L +PG + +CH+
Sbjct: 552 CHSVPKVRVYESDLLDPK-SKAKINHGIAICHMDTSAWGANHGAFMLLGSRPGQIEVCHW 610
Query: 345 LPEDHIVW 352
+ E+ + W
Sbjct: 611 IFENDMNW 618
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 360 306 0.00099 115 3 11 23 0.43 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 614 (65 KB)
Total size of DFA: 223 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.37u 0.17s 24.54t Elapsed: 00:00:01
Total cpu time: 24.37u 0.17s 24.54t Elapsed: 00:00:01
Start: Tue May 21 05:57:43 2013 End: Tue May 21 05:57:44 2013