BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018133
(360 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 151/324 (46%), Gaps = 25/324 (7%)
Query: 34 STVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSS 93
+++ IPPG GLP +GETL F+ + F + R ++G F+T +F +F S
Sbjct: 9 NSLPIPPGDFGLPWLGETLNFLNDGD-------FGKKRQQQFGPIFKTRLFGKNVIFISG 61
Query: 94 TGAAKIILNNEGENFTKRYIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFT 153
A + + E E F + S ++G N++ + H+ R L F +L +
Sbjct: 62 ALANRFLFTKEQETFQATWPLSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYL 121
Query: 154 KQFDQLVLENLSDWEHKAATVVVLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYD 213
+ D +V L W KA V+ + ++TF + + + + ++ T +
Sbjct: 122 PKMDGIVQGYLEQW-GKANEVIWYPQLRRMTFDVAATLFMGEKVSQNPQLFPWFETYI-Q 179
Query: 214 AMLAFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHEDFLQCLLAEDAVDKDRA 273
+ + P+ LP T F + +AR ++ LEK+I R++ + ED L LLA A D +
Sbjct: 180 GLFSLPIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPSEEDALGILLA--ARDDNN- 236
Query: 274 XXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFP 333
+ L+ E++D IL ++ AG +T SA++ L ++ ++ ++++ E
Sbjct: 237 ----------QPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNK 286
Query: 334 LMERTKKSLLTLEDLNRMPYASKM 357
L + LT E L +MPY ++
Sbjct: 287 LQLSQE---LTAETLKKMPYLDQV 307
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 130/315 (41%), Gaps = 46/315 (14%)
Query: 37 SIPPGSEGLPLIGETLQFMA-AINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTG 95
++P G + P I + F+ AI + +F++ + KYG F + T + +
Sbjct: 5 TLPAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSD 64
Query: 96 AAKIILNNEGENFTKRYIKS------VGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSL 149
AA ++ N++ E+ + S G+ V + ++ K+++S L +
Sbjct: 65 AAALLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHV 124
Query: 150 SIFTKQFDQLVLENLSDWEHKAATVVVLREALKVTFKAMCKILLSLES----GKEL-EML 204
SI K+ E W K F+A+ ++++ S GKE+ L
Sbjct: 125 SIIEKE----TKEYFESWGESGE---------KNVFEALSELIILTASHCLHGKEIRSQL 171
Query: 205 ENDVTRVY--------DAMLAFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE 256
V ++Y A P LP F R +A + I K I RR+ E +
Sbjct: 172 NEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKID 231
Query: 257 DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKY 316
D LQ LL DA KD + LTD+E+ ++ +++AGQ T+++ WM +
Sbjct: 232 DILQTLL--DATYKDG-----------RPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFF 278
Query: 317 LSENEEVLDKLKAEH 331
L+ ++ + K E
Sbjct: 279 LARDKTLQKKCYLEQ 293
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 133/309 (43%), Gaps = 47/309 (15%)
Query: 74 KYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKRYIKSVGEIVGDN------SVLC 127
KYG R N+F T+V +S + K L + N + +++ + G+ C
Sbjct: 22 KYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSEC 81
Query: 128 ASTQRHKLIRSRLANL-FSLSSLSIFTKQFDQLVLENLSDWEHKA--ATVVVLREALKVT 184
+ HK + R+ +L FS SSL + F++ + + E KA T V +++ L T
Sbjct: 82 NYERWHK--QRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDML--T 137
Query: 185 FKAMCKILLSLESGKELEML---ENDVTRVYDAMLAFPLKLPWTKFYRGVKARKRIMRTL 241
+ AM IL G E ML + +++ ML G+ A + TL
Sbjct: 138 YTAM-DILAKAAFGMETSMLLGAQKPLSQAVKLML------------EGITASRN---TL 181
Query: 242 EKMINIRRKGLETHEDFLQCL--LAEDAVDKDRAXXXXXXXETPKKLT-----------D 288
K + +RK L + ++ L + D V + R LT D
Sbjct: 182 AKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQDD 241
Query: 289 EEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDL 348
E + DN +T IAG +T+A+ + + V LS E++ +L+AE ++ K L EDL
Sbjct: 242 EGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVI--GSKRYLDFEDL 299
Query: 349 NRMPYASKM 357
R+ Y S++
Sbjct: 300 GRLQYLSQV 308
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 125/313 (39%), Gaps = 54/313 (17%)
Query: 39 PP-GSEGLPLIG-------ETLQFMAAINSSQGFYQFIQVRHLKYGDCFRT-----NIFA 85
PP G+PL+G + L FM+ Q+R +GD R ++A
Sbjct: 24 PPVAGGGVPLLGHGWRLARDPLAFMS------------QLR--DHGDVVRIKLGPKTVYA 69
Query: 86 TTNVFFSSTGAAKIILNNEGENFTKRYIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFS 145
TN TGA + N + +S+ ++G V A+ H+ R + F
Sbjct: 70 VTNPEL--TGALAL---NPDYHIAGPLWESLEGLLGKEGVATANGPLHRRQRRTIQPAFR 124
Query: 146 LSSLSIFTKQFDQLVLENLSDWEHKAATVVVLREALKVTFKAMCKILLSLESGKE-LEML 204
L ++ + ++ W+ TV E+ +V + + LL + E E L
Sbjct: 125 LDAIPAYGPIMEEEAHALTERWQ-PGKTVDATSESFRVAVRVAARCLLRGQYMDERAERL 183
Query: 205 ENDVTRVYDAM---LAFPL----KLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHED 257
+ V+ M + PL +LP R A + ++++I RR + +D
Sbjct: 184 CVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQKPDD 243
Query: 258 FLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL 317
L LL + D + ++EI D ++ ++ G +T AS I W+++ L
Sbjct: 244 LLTALLEAKDDNGD-------------PIGEQEIHDQVVAILTPGSETIASTIMWLLQAL 290
Query: 318 SENEEVLDKLKAE 330
+++ E D+++ E
Sbjct: 291 ADHPEHADRIRDE 303
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 138/344 (40%), Gaps = 53/344 (15%)
Query: 38 IPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAA 97
+PPG LP++G LQ ++ F+++R KYGD F + + V T A
Sbjct: 11 LPPGPSPLPVLGNLLQ----MDRKGLLRSFLRLRE-KYGDVFTVYLGSRPVVVLCGTDAI 65
Query: 98 KIILNNEGENFTKR-YIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFT--- 153
+ L ++ E F+ R I V I V+ A+ +R + +R FSL+++ F
Sbjct: 66 REALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRR-----FSLATMRDFGMGK 120
Query: 154 KQFDQLVLENLSDW--EHKAATVVVLREAL---KVTFKAMCKILLSLESGKELEMLENDV 208
+ ++ + E E + + +L L +T +C I+ GK + +
Sbjct: 121 RSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVF----GKRFDYKDPVF 176
Query: 209 TRVYDAML------------AFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE 256
R+ D F L + K++ G ++I R L+++ + +E H
Sbjct: 177 LRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPG--THRQIYRNLQEINTFIGQSVEKHR 234
Query: 257 DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITW---- 312
L D +D + + + + +L++ AG +TT++ + +
Sbjct: 235 ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLL 294
Query: 313 MVKYLSENEEV---LDKLKAEHFPLMERTKKSLLTLEDLNRMPY 353
M+KY E V ++++ H P L+D +MPY
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRP---------PALDDRAKMPY 329
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 138/344 (40%), Gaps = 53/344 (15%)
Query: 38 IPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAA 97
+PPG LP++G LQ ++ F+++R KYGD F + + V T A
Sbjct: 11 LPPGPSPLPVLGNLLQ----MDRKGLLRSFLRLRE-KYGDVFTVYLGSRPVVVLCGTDAI 65
Query: 98 KIILNNEGENFTKR-YIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFT--- 153
+ L ++ E F+ R I V I V+ A+ +R + +R FSL+++ F
Sbjct: 66 REALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRR-----FSLATMRDFGMGK 120
Query: 154 KQFDQLVLENLSDW--EHKAATVVVLREAL---KVTFKAMCKILLSLESGKELEMLENDV 208
+ ++ + E E + + +L L +T +C I+ GK + +
Sbjct: 121 RSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVF----GKRFDYKDPVF 176
Query: 209 TRVYDAML------------AFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE 256
R+ D F L + K++ G ++I R L+++ + +E H
Sbjct: 177 LRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPG--THRQIYRNLQEINTFIGQSVEKHR 234
Query: 257 DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITW---- 312
L D +D + + + + +L++ AG +TT++ + +
Sbjct: 235 ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLL 294
Query: 313 MVKYLSENEEV---LDKLKAEHFPLMERTKKSLLTLEDLNRMPY 353
M+KY E V ++++ H P L+D +MPY
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRP---------PALDDRAKMPY 329
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 138/344 (40%), Gaps = 53/344 (15%)
Query: 38 IPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAA 97
+PPG LP++G LQ ++ F+++R KYGD F + + V T A
Sbjct: 11 LPPGPSPLPVLGNLLQ----MDRKGLLRSFLRLRE-KYGDVFTVYLGSRPVVVLCGTDAI 65
Query: 98 KIILNNEGENFTKR-YIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFT--- 153
+ L ++ E F+ R I V I V+ A+ +R + +R FSL+++ F
Sbjct: 66 REALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRR-----FSLATMRDFGMGK 120
Query: 154 KQFDQLVLENLSDW--EHKAATVVVLREAL---KVTFKAMCKILLSLESGKELEMLENDV 208
+ ++ + E E + + +L L +T +C I+ GK + +
Sbjct: 121 RSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVF----GKRFDYKDPVF 176
Query: 209 TRVYDAML------------AFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE 256
R+ D F L + K++ G ++I R L+++ + +E H
Sbjct: 177 LRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPG--THRQIYRNLQEINTFIGQSVEKHR 234
Query: 257 DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITW---- 312
L D +D + + + + +L++ AG +TT++ + +
Sbjct: 235 ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLL 294
Query: 313 MVKYLSENEEV---LDKLKAEHFPLMERTKKSLLTLEDLNRMPY 353
M+KY E V ++++ H P L+D +MPY
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRP---------PALDDRAKMPY 329
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 138/344 (40%), Gaps = 53/344 (15%)
Query: 38 IPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAA 97
+PPG LP++G LQ ++ F+++R KYGD F + + V T A
Sbjct: 11 LPPGPSPLPVLGNLLQ----MDRKGLLRSFLRLRE-KYGDVFTVYLGSRPVVVLCGTDAI 65
Query: 98 KIILNNEGENFTKR-YIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFT--- 153
+ L ++ E F+ R I V I V+ A+ +R + +R FSL+++ F
Sbjct: 66 REALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRR-----FSLATMRDFGMGK 120
Query: 154 KQFDQLVLENLSDW--EHKAATVVVLREAL---KVTFKAMCKILLSLESGKELEMLENDV 208
+ ++ + E E + + +L L +T +C I+ GK + +
Sbjct: 121 RSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVF----GKRFDYKDPVF 176
Query: 209 TRVYDAML------------AFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE 256
R+ D F L + K++ G ++I R L+++ + +E H
Sbjct: 177 LRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPG--THRQIYRNLQEINTFIGQSVEKHR 234
Query: 257 DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITW---- 312
L D +D + + + + +L++ AG +TT++ + +
Sbjct: 235 ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLL 294
Query: 313 MVKYLSENEEV---LDKLKAEHFPLMERTKKSLLTLEDLNRMPY 353
M+KY E V ++++ H P L+D +MPY
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRP---------PALDDRAKMPY 329
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 137/344 (39%), Gaps = 53/344 (15%)
Query: 38 IPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAA 97
+PPG LP++G LQ ++ F+++R KYGD F + + V T A
Sbjct: 11 LPPGPSPLPVLGNLLQ----MDRKGLLRSFLRLRE-KYGDVFTVYLGSRPVVVLCGTDAI 65
Query: 98 KIILNNEGENFTKR-YIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFT--- 153
+ L ++ E F+ R I V I V+ A+ +R + +R FSL+++ F
Sbjct: 66 REALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRR-----FSLATMRDFGMGK 120
Query: 154 KQFDQLVLENLSDW--EHKAATVVVLREAL---KVTFKAMCKILLSLESGKELEMLENDV 208
+ ++ + E E + + +L L +T +C I+ GK + +
Sbjct: 121 RSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVF----GKRFDYKDPVF 176
Query: 209 TRVYDAML------------AFPLKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE 256
R+ D F L + K + G ++I R L+++ + +E H
Sbjct: 177 LRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPG--THRQIYRNLQEINTFIGQSVEKHR 234
Query: 257 DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITW---- 312
L D +D + + + + +L++ AG +TT++ + +
Sbjct: 235 ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLL 294
Query: 313 MVKYLSENEEV---LDKLKAEHFPLMERTKKSLLTLEDLNRMPY 353
M+KY E V ++++ H P L+D +MPY
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRP---------PALDDRAKMPY 329
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 285 KLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLT 344
+L+DE+I + +L + AG DT +AI+W + YL N V K++ E ++ R+++ L+
Sbjct: 274 QLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLS 333
Query: 345 LEDLNRMPY 353
D + +PY
Sbjct: 334 --DRSHLPY 340
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 139/346 (40%), Gaps = 57/346 (16%)
Query: 38 IPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAA 97
+PPG LP+IG LQ + + + F F +V YG F V F A
Sbjct: 11 LPPGPTPLPIIGNMLQ-IDVKDICKSFTNFSKV----YGPVFTVYFGMNPIVVFHGYEAV 65
Query: 98 KIILNNEGENFTKRYIKSVGE-IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQF 156
K L + GE F+ R + + I ++ ++ +R K IR FSL++L F
Sbjct: 66 KEALIDNGEEFSGRGNSPISQRITKGLGIISSNGKRWKEIRR-----FSLTTLRNFG--- 117
Query: 157 DQLVLENLSDWEHKAATVVV--LRE----ALKVTF---KAMCKILLSLESGKELEMLEND 207
+ ++ D + A +V LR+ TF A C ++ S+ K + + +
Sbjct: 118 --MGKRSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQN 175
Query: 208 ---VTRVYDAMLAFPLKLPWTKFYRGVK--------ARKRIMRTLEKMINIRRKGLETHE 256
+ + ++ L PW + ++++ + + R+ ++ H+
Sbjct: 176 FLTLMKRFNENFRI-LNSPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKEHQ 234
Query: 257 ---------DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTA 307
DF+ C L + +KD + E + + + +AG +TT+
Sbjct: 235 ASLDVNNPRDFIDCFLIKMEQEKDNQK---------SEFNIENLVGTVADLFVAGTETTS 285
Query: 308 SAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPY 353
+ + + + L ++ EV K++ E ++ R + ++D + MPY
Sbjct: 286 TTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSP--CMQDRSHMPY 329
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 114/315 (36%), Gaps = 38/315 (12%)
Query: 38 IPPGSEGL-PLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGA 96
+PP G P +G +QF + F+ KYG F NI
Sbjct: 4 LPPVVHGTTPFVGHIIQF------GKDPLGFMLKAKKKYGGIFTMNICGNRITVVGDVHQ 57
Query: 97 AKIILNNEGENFTKRYIKS-VGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQ 155
E + R + S + + G+ A R + + LA +++ F
Sbjct: 58 HSKFFTPRNEILSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTVAKFQNFAPS 117
Query: 156 FDQLVLENL-SDWEHKAATVVVLREALKVTFKAMCKILLSLESGKEL------EMLENDV 208
V + + ++W + +L + + C+ L + K L ++L
Sbjct: 118 IQHEVRKFMKANWNKDEGEINILDDCSAMIINTACQCLFGEDLRKRLDARQFAQLLAKME 177
Query: 209 TRVYDAMLAFP--LKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE----DFLQCL 262
+ + A + P LKLP + YR AR + L ++I R K + D L L
Sbjct: 178 SCLIPAAVFLPWILKLPLPQSYRCRDARAELQDILSEIIIAREKEEAQKDTNTSDLLAGL 237
Query: 263 LAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SEN 320
L AV +D +++ E+ I+ + AGQ T+ TW + +L N
Sbjct: 238 LG--AVYRDGT-----------RMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRN 284
Query: 321 EEVLDKLKAE--HFP 333
+ L KL E FP
Sbjct: 285 KRHLAKLHQEIDEFP 299
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 19/220 (8%)
Query: 120 VGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLENLSDWEHKAATVVVLRE 179
+GD S+L + + KL RS L L + SS+ + Q Q E + A V + +E
Sbjct: 110 LGDYSLLWKAHK--KLTRSALL-LGTRSSMEPWVDQLTQEFCERMR--VQAGAPVTIQKE 164
Query: 180 ALKVTFKAMCKILLSLESGKELEMLEN-------DVTRVYDAMLAFPLKL-PWTKFYRGV 231
+T C I+ L G + + L + D+ + +D L + P+ +F+
Sbjct: 165 FSLLT----CSIICYLTFGNKEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPN- 219
Query: 232 KARKRIMRTLEKMINIRRKGLETHEDFLQCLLAEDAVDKD-RAXXXXXXXETPKKLTDEE 290
R+ + +E ++ K L H++ + D D + E P +L +
Sbjct: 220 PGLWRLKQAIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGH 279
Query: 291 IQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
+ +++ + I G +TTAS ++W V +L + E+ +L+ E
Sbjct: 280 VHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEE 319
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 137/363 (37%), Gaps = 53/363 (14%)
Query: 24 MNTKKMLRGRSTVSI--PPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRT 81
M K LR R + PP G PL+G L N + Q +YGD +
Sbjct: 1 MAVLKGLRPRVPKGLKSPPEPWGWPLLGHVLTL--GKNPHLALSRMSQ----RYGDVLQI 54
Query: 82 NIFATTNVFFSSTGAAKIILNNEGENFTKRYIKSVGEIVGDNSVLCASTQRHKL--IRSR 139
I +T + S + L +G++F R ++ D L ST + R R
Sbjct: 55 RIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRR 114
Query: 140 LA----NLFSLSS-------------LSIFTKQFDQLVLENLSDWEHKAATVVVLREALK 182
LA N FS++S +S K + E ++ H V+
Sbjct: 115 LAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVAN 174
Query: 183 VTFKAMCKILLSLESGKE-LEMLENDVTRVYDAMLAFPLK-------LPWTKFYRGVKAR 234
V AMC ES E L +++N V A PL LP R
Sbjct: 175 V-IGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFN 233
Query: 235 KRIMRTLEKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
+R + L+K + E ++DF +++V + P+ + Q+
Sbjct: 234 QRFLWFLQKTVQ------EHYQDF-----DKNSVRDITGALFKHSKKGPRASGNLIPQEK 282
Query: 295 ILTMI----IAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNR 350
I+ ++ AG DT +AI+W + YL E+ K++ E ++ R ++ L+ D +
Sbjct: 283 IVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLS--DRPQ 340
Query: 351 MPY 353
+PY
Sbjct: 341 LPY 343
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLH----GKD--------PETGEPLDDENIRYQ 258
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +T+ + +L +N VL K E
Sbjct: 259 IITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEE 294
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 140/346 (40%), Gaps = 39/346 (11%)
Query: 29 MLRGRSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTN 88
M + S+ PPG LP+IG LQ + + S+ +V YG F
Sbjct: 1 MAKKTSSKGRPPGPTPLPVIGNILQ-IGIKDISKSLTNLSKV----YGPVFTLYFGLKPI 55
Query: 89 VFFSSTGAAKIILNNEGENFTKRYIKSVGEIVGDN-SVLCASTQRHKLIRSRLANLFSLS 147
V A K L + GE F+ R I + E ++ ++ ++ K IR FSL
Sbjct: 56 VVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRR-----FSLM 110
Query: 148 SLSIFTKQFDQLVLENLSDWEHKAATVVV--LRE----ALKVTF---KAMCKILLSLESG 198
+L F + ++ D + A +V LR+ TF A C ++ S+
Sbjct: 111 TLRNFG-----MGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFH 165
Query: 199 KELEMLENDVTRVYDAM---LAFPLKLPWTKFYRGVKA--------RKRIMRTLEKMINI 247
K + + + + + + L PW + Y A ++++ + M +
Sbjct: 166 KRFDYKDQQFLNLMEKLNENIEI-LSSPWIQVYNNFPALLDYFPGTHNKLLKNVAFMKSY 224
Query: 248 RRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTA 307
+ ++ H++ + +D +D P + T E +++ + + AG +TT+
Sbjct: 225 ILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTS 284
Query: 308 SAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPY 353
+ + + + L ++ EV K++ E ++ R + ++D + MPY
Sbjct: 285 TTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSP--CMQDRSHMPY 328
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 258
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 294
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 128/320 (40%), Gaps = 53/320 (16%)
Query: 40 PGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKI 99
PG LP +G L + +GF F H KYG + + + K
Sbjct: 19 PGPTPLPFLGNILSY------HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKT 72
Query: 100 ILNNEGEN-FT-KRYIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFS---LSSLSIFTK 154
+L E + FT +R VG + +++ A + K +RS L+ F+ L +
Sbjct: 73 VLVKECYSVFTNRRPFGPVGFM--KSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIA 130
Query: 155 QFDQLVLENLSDWEHKAATVVVLREALKVTFKAMC-KILLSLESGKELEMLEND------ 207
Q+ +++ NL V LK F A ++ S G ++ L N
Sbjct: 131 QYGDVLVRNLRREAETGKPV-----TLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVE 185
Query: 208 ----------VTRVYDAMLAFPLKLPWTK------FYRGVKARKRIMRTLEKMINIRRKG 251
+ + ++ FP +P + F R V R +++++M R +
Sbjct: 186 NTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLR--KSVKRMKESRLED 243
Query: 252 LETHE-DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAI 310
+ H DFLQ + +D + E+ K L+D E+ + I AG +TT+S +
Sbjct: 244 TQKHRVDFLQLM-----IDSQNSKET----ESHKALSDLELVAQSIIFIFAGYETTSSVL 294
Query: 311 TWMVKYLSENEEVLDKLKAE 330
++++ L+ + +V KL+ E
Sbjct: 295 SFIMYELATHPDVQQKLQEE 314
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 128/320 (40%), Gaps = 53/320 (16%)
Query: 40 PGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKI 99
PG LP +G L + +GF F H KYG + + + K
Sbjct: 18 PGPTPLPFLGNILSY------HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKT 71
Query: 100 ILNNEGEN-FT-KRYIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFS---LSSLSIFTK 154
+L E + FT +R VG + +++ A + K +RS L+ F+ L +
Sbjct: 72 VLVKECYSVFTNRRPFGPVGFM--KSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIA 129
Query: 155 QFDQLVLENLSDWEHKAATVVVLREALKVTFKAMC-KILLSLESGKELEMLEND------ 207
Q+ +++ NL V LK F A ++ S G ++ L N
Sbjct: 130 QYGDVLVRNLRREAETGKPV-----TLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVE 184
Query: 208 ----------VTRVYDAMLAFPLKLPWTK------FYRGVKARKRIMRTLEKMINIRRKG 251
+ + ++ FP +P + F R V R +++++M R +
Sbjct: 185 NTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLR--KSVKRMKESRLED 242
Query: 252 LETHE-DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAI 310
+ H DFLQ + +D + E+ K L+D E+ + I AG +TT+S +
Sbjct: 243 TQKHRVDFLQLM-----IDSQNSKET----ESHKALSDLELVAQSIIFIFAGYETTSSVL 293
Query: 311 TWMVKYLSENEEVLDKLKAE 330
++++ L+ + +V KL+ E
Sbjct: 294 SFIMYELATHPDVQQKLQEE 313
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 213 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 260
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 261 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 296
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 213 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 260
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 261 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 296
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 258
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 294
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 258
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 294
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 258
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 294
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 213 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 260
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 261 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 296
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 216 KVMNDLVDKIIADRKASGEQSDDLLTHMLH----GKD--------PETGEPLDDENIRYQ 263
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 264 IVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEE 299
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 129/320 (40%), Gaps = 53/320 (16%)
Query: 40 PGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKI 99
PG LP +G L + +GF F H KYG + + + K
Sbjct: 17 PGPTPLPFLGNILSY------HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKT 70
Query: 100 ILNNEGEN-FT-KRYIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFS---LSSLSIFTK 154
+L E + FT +R VG + +++ A + K +RS L+ F+ L +
Sbjct: 71 VLVKECYSVFTNRRPFGPVGFM--KSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIA 128
Query: 155 QFDQLVLENLSDWEHKAATVVVLREALKVTFKAMC-KILLSLESGKELEMLEND------ 207
Q+ +++ NL V LK F A ++ S G ++ L N
Sbjct: 129 QYGDVLVRNLRREAETGKPV-----TLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVE 183
Query: 208 ----------VTRVYDAMLAFPLKLPWTK------FYRGVKARKRIMRTLEKMINIRRKG 251
+ + ++ FP +P + F R V R +++++M R +
Sbjct: 184 NTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLR--KSVKRMKESRLED 241
Query: 252 LETHE-DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAI 310
+ H DFLQ ++ D+ + E+ K L+D E+ + I AG +TT+S +
Sbjct: 242 TQKHRVDFLQLMI--DSQNSKET-------ESHKALSDLELVAQSIIFIFAGYETTSSVL 292
Query: 311 TWMVKYLSENEEVLDKLKAE 330
++++ L+ + +V KL+ E
Sbjct: 293 SFIMYELATHPDVQQKLQEE 312
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 132/321 (41%), Gaps = 58/321 (18%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNE 104
LPL+G +L F+ + +Q KYG + + T V AK +L +
Sbjct: 16 LPLVG-SLPFLPRHGHMHNNFFKLQK---KYGPIYSVRMGTKTTVIVGHHQLAKEVLIKK 71
Query: 105 GENFTKRYIKSVGEIVGDN--SVLCASTQRHKLIRSRLANLFSLSSLSIFT---KQFDQL 159
G++F+ R + +I +N + A + H + RLA +++ ++F ++ +++
Sbjct: 72 GKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLA----MATFALFKDGDQKLEKI 127
Query: 160 VLENLSDWEHKAATVVVLREALKVTFKAMCKI--LLSL--------ESGKELEMLENDVT 209
+ + +S AT +++ ++F + ++SL EL +++N
Sbjct: 128 ICQEISTLCDMLATHN--GQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNE 185
Query: 210 RVYDAMLAFPLK--LPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHEDFLQCLLAEDA 267
+ D + L +PW K + +TLEK+ + ++ D L +L E+
Sbjct: 186 GIIDNLSKDSLVDLVPWLKIFPN--------KTLEKL----KSHVKIRNDLLNKIL-ENY 232
Query: 268 VDKDRAXXXXXXXET--------------PKK----LTDEEIQDNILTMIIAGQDTTASA 309
+K R+ +T P + L+D I I + AG +TT S
Sbjct: 233 KEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSV 292
Query: 310 ITWMVKYLSENEEVLDKLKAE 330
+ W + +L N +V KL E
Sbjct: 293 VKWTLAFLLHNPQVKKKLYEE 313
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K E
Sbjct: 258 IITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 258
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG ++T+ +++ + +L +N VL K E
Sbjct: 259 IITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEE 294
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG ++T+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG ++T+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG + T+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +I G +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG + T+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG + T+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFL-QCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQD 293
++M L +K+I R+ E +D L Q L +D ET + L D I
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTQMLNGKDP-------------ETGEPLDDGNISY 256
Query: 294 NILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG +TT+ +++ + +L +N VL K+ E
Sbjct: 257 QIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEE 293
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +IAG + T+ +++ + +L +N VL K E
Sbjct: 258 IITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +I G +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +I G +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +I G +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +I G +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T +I G +TT+ +++ + +L +N VL K E
Sbjct: 258 IITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 285 KLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
K++ E+I+ N+ M+ G DTT+ + W + ++ N +V D L+AE
Sbjct: 267 KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAE 312
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKA 329
+ +T EE N+L +I+ G DTT +++T V L +N + KLKA
Sbjct: 248 RNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKA 293
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 285 KLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
K++ E+I+ N+ M+ G DTT+ + W + ++ N +V D L+AE
Sbjct: 270 KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAE 315
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 142/350 (40%), Gaps = 45/350 (12%)
Query: 27 KKMLRGRSTVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFAT 86
KK GR +PPG LP+IG LQ + + S+ +V YG F
Sbjct: 3 KKTSSGRG--KLPPGPTPLPVIGNILQ-IGIKDISKSLTNLSKV----YGPVFTLYFGLK 55
Query: 87 TNVFFSSTGAAKIILNNEGENFTKRYIKSVGEIVGDN-SVLCASTQRHKLIRSRLANLFS 145
V A K L + GE F+ R I + E ++ ++ ++ K IR FS
Sbjct: 56 PIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRR-----FS 110
Query: 146 LSSLSIFTKQFDQLVLENLSDWEHKAATVVV--LRE----ALKVTF---KAMCKILLSLE 196
L +L F + ++ D + A +V LR+ TF A C ++ S+
Sbjct: 111 LMTLRNFG-----MGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSII 165
Query: 197 SGKELEMLENDVTRVYDAM---LAFPLKLPWTK----------FYRGVKARKRIMRTLEK 243
K + + + + + + L PW + ++ G ++++ +
Sbjct: 166 FHKRFDYKDQQFLNLMEKLNENIKI-LSSPWIQICNNFSPIIDYFPG--THNKLLKNVAF 222
Query: 244 MINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQ 303
M + + ++ H++ + +D +D P + T E +++ + + AG
Sbjct: 223 MKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGT 282
Query: 304 DTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTLEDLNRMPY 353
+TT++ + + + L ++ EV K++ E ++ R + ++D + MPY
Sbjct: 283 ETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSP--CMQDRSHMPY 330
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 132/333 (39%), Gaps = 48/333 (14%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQ--VRHLKYGDCFRTNIFATTNVFFSSTGAAKIILN 102
+P +G +QF + +F+Q R LK G F +I +
Sbjct: 16 VPFLGHIVQF------GKNPLEFMQRCKRDLKSG-VFTISIGGQRVTIVGDPHEHSRFFS 68
Query: 103 NEGENFTKRYIKSV-GEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVL 161
E + R + ++ + G+ A R + + LA +++ F V
Sbjct: 69 PRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVR 128
Query: 162 ENLSD-WEHKAATVVVLREALKVTFKAMCKILLSLESGKEL------EMLENDVTRVYDA 214
+ +++ W+ + +L + + C+ L + K L ++L + + A
Sbjct: 129 KFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSLIPA 188
Query: 215 MLAFP--LKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE----DFLQCLLAEDAV 268
+ P L+LP + R +AR + + L ++I R K + + D L LL AV
Sbjct: 189 AVFMPWLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLL--KAV 246
Query: 269 DKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SENEEVLDK 326
+D +++ E+ I+ + AGQ T+ +W + +L +N++ LDK
Sbjct: 247 YRDGT-----------RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDK 295
Query: 327 LKAE--HFPLMERTKKSLLTLED-LNRMPYASK 356
L E FP + L ++ ++ MP+A +
Sbjct: 296 LHKEIDEFP-------AQLNYDNVMDEMPFAER 321
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 132/333 (39%), Gaps = 48/333 (14%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQ--VRHLKYGDCFRTNIFATTNVFFSSTGAAKIILN 102
+P +G +QF + +F+Q R LK G F +I +
Sbjct: 25 VPFLGHIVQF------GKNPLEFMQRCKRDLKSG-VFTISIGGQRVTIVGDPHEHSRFFS 77
Query: 103 NEGENFTKRYIKSV-GEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVL 161
E + R + ++ + G+ A R + + LA +++ F V
Sbjct: 78 PRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVR 137
Query: 162 ENLSD-WEHKAATVVVLREALKVTFKAMCKILLSLESGKEL------EMLENDVTRVYDA 214
+ +++ W+ + +L + + C+ L + K L ++L + + A
Sbjct: 138 KFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSLIPA 197
Query: 215 MLAFP--LKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE----DFLQCLLAEDAV 268
+ P L+LP + R +AR + + L ++I R K + + D L LL AV
Sbjct: 198 AVFMPWLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLL--KAV 255
Query: 269 DKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SENEEVLDK 326
+D +++ E+ I+ + AGQ T+ +W + +L +N++ LDK
Sbjct: 256 YRDGT-----------RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDK 304
Query: 327 LKAE--HFPLMERTKKSLLTLED-LNRMPYASK 356
L E FP + L ++ ++ MP+A +
Sbjct: 305 LHKEIDEFP-------AQLNYDNVMDEMPFAER 330
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T + AG + T+ +++ + +L +N VL K E
Sbjct: 258 IITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEE 293
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 258
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T + AG + T+ +++ + +L +N VL K E
Sbjct: 259 IITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEE 294
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 132/333 (39%), Gaps = 48/333 (14%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQ--VRHLKYGDCFRTNIFATTNVFFSSTGAAKIILN 102
+P +G +QF + +F+Q R LK G F +I +
Sbjct: 10 VPFLGHIVQF------GKNPLEFMQRCKRDLKSG-VFTISIGGQRVTIVGDPHEHSRFFS 62
Query: 103 NEGENFTKRYIKSV-GEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVL 161
E + R + ++ + G+ A R + + LA +++ F V
Sbjct: 63 PRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVR 122
Query: 162 ENLSD-WEHKAATVVVLREALKVTFKAMCKILLSLESGKEL------EMLENDVTRVYDA 214
+ +++ W+ + +L + + C+ L + K L ++L + + A
Sbjct: 123 KFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSLIPA 182
Query: 215 MLAFP--LKLPWTKFYRGVKARKRIMRTLEKMINIRRKGLETHE----DFLQCLLAEDAV 268
+ P L+LP + R +AR + + L ++I R K + + D L LL AV
Sbjct: 183 AVFMPWLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLL--KAV 240
Query: 269 DKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SENEEVLDK 326
+D +++ E+ I+ + AGQ T+ +W + +L +N++ LDK
Sbjct: 241 YRDGT-----------RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDK 289
Query: 327 LKAE--HFPLMERTKKSLLTLED-LNRMPYASK 356
L E FP + L ++ ++ MP+A +
Sbjct: 290 LHKEIDEFP-------AQLNYDNVMDEMPFAER 315
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Query: 34 STVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSS 93
S +PPG LP IG LQ +N+ Q + +++ +YG F ++ V
Sbjct: 7 SKGKLPPGPTPLPFIGNYLQ----LNTEQMYNSLMKISE-RYGPVFTIHLGPRRVVVLCG 61
Query: 94 TGAAKIILNNEGENFTKRYIKSVGE-IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF 152
A + L ++ E F+ R ++ + + V+ ++ +R K +R FS+++L F
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRR-----FSIATLRDF 116
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Query: 34 STVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSS 93
S +PPG LP IG LQ +N+ Q + +++ +YG F ++ V
Sbjct: 7 SKGKLPPGPTPLPFIGNYLQ----LNTEQMYNSLMKISE-RYGPVFTIHLGPRRVVVLCG 61
Query: 94 TGAAKIILNNEGENFTKRYIKSVGE-IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF 152
A + L ++ E F+ R ++ + + V+ ++ +R K +R FS+++L F
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRR-----FSIATLRDF 116
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Query: 34 STVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSS 93
S +PPG LP IG LQ +N+ Q + +++ +YG F ++ V
Sbjct: 7 SKGKLPPGPTPLPFIGNYLQ----LNTEQMYNSLMKISE-RYGPVFTIHLGPRRVVVLCG 61
Query: 94 TGAAKIILNNEGENFTKRYIKSVGE-IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF 152
A + L ++ E F+ R ++ + + V+ ++ +R K +R FS+++L F
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRR-----FSIATLRDF 116
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Query: 34 STVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSS 93
S +PPG LP IG LQ +N+ Q + +++ +YG F ++ V
Sbjct: 7 SKGKLPPGPTPLPFIGNYLQ----LNTEQMYNSLMKISE-RYGPVFTIHLGPRRVVVLCG 61
Query: 94 TGAAKIILNNEGENFTKRYIKSVGE-IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF 152
A + L ++ E F+ R ++ + + V+ ++ +R K +R FS+++L F
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRR-----FSIATLRDF 116
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Query: 34 STVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSS 93
S +PPG LP IG LQ +N+ Q + +++ +YG F ++ V
Sbjct: 7 SKGKLPPGPTPLPFIGNYLQ----LNTEQMYNSLMKISE-RYGPVFTIHLGPRRVVVLCG 61
Query: 94 TGAAKIILNNEGENFTKRYIKSVGE-IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF 152
A + L ++ E F+ R ++ + + V+ ++ +R K +R FS+++L F
Sbjct: 62 HDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRR-----FSIATLRDF 116
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 34 STVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSS 93
S +PPG LP IG LQ +N+ Q + +++ +YG F ++ V
Sbjct: 7 SKGKLPPGPTPLPFIGNYLQ----LNTEQMYNSLMKISE-RYGPVFTIHLGPRRVVVLCG 61
Query: 94 TGAAKIILNNEGENFTKRYIKSVGE-IVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIF 152
A K L ++ E F+ R ++ + + V ++ +R K +R FS+++L F
Sbjct: 62 HDAVKEALVDQAEEFSGRGEQATFDWLFKGYGVAFSNGERAKQLRR-----FSIATLRGF 116
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 284 KKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLD 325
+KLT +E I+ +II G +TT + I M++ + EN +++D
Sbjct: 171 RKLTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIID 212
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 257
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T + AG + T+ +++ + +L +N L K E
Sbjct: 258 IITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEE 293
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 236 RIMRTL-EKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDN 294
++M L +K+I R+ E +D L +L KD ET + L DE I+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLN----GKD--------PETGEPLDDENIRYQ 258
Query: 295 ILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAE 330
I+T + AG + T+ +++ + +L +N L K E
Sbjct: 259 IITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEE 294
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 286 LTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEE 322
L E +T+++AG +T ASA+TW LS +
Sbjct: 206 LPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPD 242
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 31.2 bits (69), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 286 LTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEE 322
L E +T+++AG +T ASA+TW LS +
Sbjct: 206 LPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPD 242
>pdb|2WM4|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp124 In Complex With Phytanic Acid
pdb|2WM5|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp124
Length = 435
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 255 HEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMV 314
H D L L E VD +R L+ EI + +++AG +TT +AIT V
Sbjct: 241 HHDDLTSSLVEAEVDGER-------------LSSREIASFFILLVVAGNETTRNAITHGV 287
Query: 315 KYLSENEEVLDKLKAE 330
LS E D+ ++
Sbjct: 288 LALSRYPEQRDRWWSD 303
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 236 RIMRTLEKMINIRRKGLETHEDFLQCLLA--EDAVDKDRAXXXXXXXETPKKLTDEEIQD 293
R+ L+++I +R +D L+A +D D DR L+ EE++D
Sbjct: 190 RLYEVLDQLIAAKRA--TPGDDMTSLLIAARDDEGDGDR-------------LSPEELRD 234
Query: 294 NILTMIIAGQDTTASAITWMVKYL 317
+L MI AG +TT + I V L
Sbjct: 235 TLLLMISAGYETTVNVIDQAVHTL 258
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 127/352 (36%), Gaps = 62/352 (17%)
Query: 34 STVSIPPGSEGLPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSS 93
S +PPG LP+IG Q + N + F + Q ++G F + + V
Sbjct: 7 SKGKLPPGPFPLPIIGNLFQ-LELKNIPKSFTRLAQ----RFGPVFTLYVGSQRMVVMHG 61
Query: 94 TGAAKIILNNEGENFTKRYIKSVGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFT 153
A K L + + F+ R D ++ + K IR FSL++L
Sbjct: 62 YKAVKEALLDYKDEFSGRGDLPAFHAHRDRGIIFNNGPTWKDIRR-----FSLTTL---- 112
Query: 154 KQFDQLVLENLSDWEHKAATVV-VLREALKVTFK-------AMCKILLSLESGKELEMLE 205
+ + N S + +A ++ LR+ F A C ++ + K + +
Sbjct: 113 RNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYND 172
Query: 206 NDVTRVYDAMLAFP-----LKLPWTKFYRGVKA---------RKRIMRTLEKMINIRRKG 251
R+ M F L PW + Y + RK I E + +
Sbjct: 173 EKFLRL---MYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERV 229
Query: 252 LETHE--------DFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQ 303
E H+ D CLL E +K A + T + I + + AG
Sbjct: 230 KEHHQSLDPNCPRDLTDCLLVEMEKEKHSAE---------RLYTMDGITVTVADLFFAGT 280
Query: 304 DTTASAITWMVKYLSENEEVLDKLKAEHFPLMERT--KKSLLTLEDLNRMPY 353
+TT++ + + + L + E+ +KL E ++R + ++D MPY
Sbjct: 281 ETTSTTLRYGLLILMKYPEIEEKLHEE----IDRVIGPSRIPAIKDRQEMPY 328
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Query: 235 KRIMRT--LEKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKKLTDEEIQ 292
+RI R L + + R +L LLA D D + +TDEE++
Sbjct: 177 RRIRRNADLSRGLKARAADSAAFNRYLDNLLARQRADPDDGLLGMIVRDHGDNVTDEELK 236
Query: 293 DNILTMIIAGQDTTASAITWMVKYLSEN 320
+I+ G +T A I + V L +N
Sbjct: 237 GLCTALILGGVETVAGMIGFGVLALLDN 264
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 285 KLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLK 328
KLT+EE + + IAG +TT + I+ V L ++ E L KL+
Sbjct: 218 KLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLR 261
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 286 LTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLTL 345
L+ +E+ + + +A +TTA+++ W++ LS N + +L E ++ +
Sbjct: 279 LSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTP--RA 336
Query: 346 EDLNRMPY 353
EDL MPY
Sbjct: 337 EDLRNMPY 344
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 127/335 (37%), Gaps = 52/335 (15%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNE 104
+P++G +QF S GF Q + R LK G F NI
Sbjct: 11 VPILGHIIQFG---KSPLGFMQECK-RQLKSG-IFTINIVGKRVTIVGDPHEHSRFFLPR 65
Query: 105 GENFTKRYIKS-VGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLEN 163
E + R + S + + G+ A R + + LA +++ F V +
Sbjct: 66 NEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKF 125
Query: 164 LS-DWEHKAATVVVLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYDAMLAF--PL 220
++ +W+ + +L + + C+ L + K L+ R + +LA
Sbjct: 126 MAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLD------ARRFAQLLAKMESS 179
Query: 221 KLPWTKFY------------RGVKARKRIMRTLEKMINIRRKGLETHED-----FLQCLL 263
+P F R +AR + + L ++I I RK E ++D L LL
Sbjct: 180 LIPAAVFLPILLKLPLPQSARCHEARTELQKILSEII-IARKEEEVNKDSSTSDLLSGLL 238
Query: 264 AEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SENE 321
+ AV +D TP L E+ I+ + AGQ T++ TW + +L N
Sbjct: 239 S--AVYRD---------GTPMSL--HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANV 285
Query: 322 EVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASK 356
+ L+ L+ E +E L ++ MP+A +
Sbjct: 286 KHLEALRKE----IEEFPAQLNYNNVMDEMPFAER 316
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 127/335 (37%), Gaps = 52/335 (15%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNE 104
+P++G +QF S GF Q + R LK G F NI
Sbjct: 25 VPILGHIIQFG---KSPLGFMQECK-RQLKSG-IFTINIVGKRVTIVGDPHEHSRFFLPR 79
Query: 105 GENFTKRYIKS-VGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLEN 163
E + R + S + + G+ A R + + LA +++ F V +
Sbjct: 80 NEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKF 139
Query: 164 LS-DWEHKAATVVVLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYDAMLAF--PL 220
++ +W+ + +L + + C+ L + K L+ R + +LA
Sbjct: 140 MAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLD------ARRFAQLLAKMESS 193
Query: 221 KLPWTKFY------------RGVKARKRIMRTLEKMINIRRKGLETHED-----FLQCLL 263
+P F R +AR + + L ++I I RK E ++D L LL
Sbjct: 194 LIPAAVFLPILLKLPLPQSARCHEARTELQKILSEII-IARKEEEVNKDSSTSDLLSGLL 252
Query: 264 AEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SENE 321
+ AV +D TP L E+ I+ + AGQ T++ TW + +L N
Sbjct: 253 S--AVYRD---------GTPMSL--HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANV 299
Query: 322 EVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASK 356
+ L+ L+ E +E L ++ MP+A +
Sbjct: 300 KHLEALRKE----IEEFPAQLNYNNVMDEMPFAER 330
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 127/335 (37%), Gaps = 52/335 (15%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNE 104
+P++G +QF S GF Q + R LK G F NI
Sbjct: 12 VPILGHIIQFG---KSPLGFMQECK-RQLKSG-IFTINIVGKRVTIVGDPHEHSRFFLPR 66
Query: 105 GENFTKRYIKS-VGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLEN 163
E + R + S + + G+ A R + + LA +++ F V +
Sbjct: 67 NEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKF 126
Query: 164 LS-DWEHKAATVVVLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYDAMLAF--PL 220
++ +W+ + +L + + C+ L + K L+ R + +LA
Sbjct: 127 MAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLD------ARRFAQLLAKMESS 180
Query: 221 KLPWTKFY------------RGVKARKRIMRTLEKMINIRRKGLETHED-----FLQCLL 263
+P F R +AR + + L ++I I RK E ++D L LL
Sbjct: 181 LIPAAVFLPILLKLPLPQSARCHEARTELQKILSEII-IARKEEEVNKDSSTSDLLSGLL 239
Query: 264 AEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SENE 321
+ AV +D TP L E+ I+ + AGQ T++ TW + +L N
Sbjct: 240 S--AVYRD---------GTPMSL--HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANV 286
Query: 322 EVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASK 356
+ L+ L+ E +E L ++ MP+A +
Sbjct: 287 KHLEALRKE----IEEFPAQLNYNNVMDEMPFAER 317
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 127/335 (37%), Gaps = 52/335 (15%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNE 104
+P++G +QF S GF Q + R LK G F NI
Sbjct: 13 VPILGHIIQFG---KSPLGFMQECK-RQLKSG-IFTINIVGKRVTIVGDPHEHSRFFLPR 67
Query: 105 GENFTKRYIKS-VGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLEN 163
E + R + S + + G+ A R + + LA +++ F V +
Sbjct: 68 NEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKF 127
Query: 164 LS-DWEHKAATVVVLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYDAMLAFPLK- 221
++ +W+ + +L + + C+ L + K L+ R + +LA
Sbjct: 128 MAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLD------ARRFAQLLAKMESS 181
Query: 222 -LPWTKFY------------RGVKARKRIMRTLEKMINIRRKGLETHED-----FLQCLL 263
+P F R +AR + + L ++I I RK E ++D L LL
Sbjct: 182 LIPAAVFLPILLKLPLPQSARCHEARTELQKILSEII-IARKEEEVNKDSSTSDLLSGLL 240
Query: 264 AEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SENE 321
+ AV +D TP L E+ I+ + AGQ T++ TW + +L N
Sbjct: 241 S--AVYRD---------GTPMSL--HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANV 287
Query: 322 EVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASK 356
+ L+ L+ E +E L ++ MP+A +
Sbjct: 288 KHLEALRKE----IEEFPAQLNYNNVMDEMPFAER 318
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 127/335 (37%), Gaps = 52/335 (15%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNE 104
+P++G +QF S GF Q + R LK G F NI
Sbjct: 12 VPILGHIIQFG---KSPLGFMQECK-RQLKSG-IFTINIVGKRVTIVGDPHEHSRFFLPR 66
Query: 105 GENFTKRYIKS-VGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLEN 163
E + R + S + + G+ A R + + LA +++ F V +
Sbjct: 67 NEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKF 126
Query: 164 LS-DWEHKAATVVVLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYDAMLAF--PL 220
++ +W+ + +L + + C+ L + K L+ R + +LA
Sbjct: 127 MAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLD------ARRFAQLLAKMESS 180
Query: 221 KLPWTKFY------------RGVKARKRIMRTLEKMINIRRKGLETHED-----FLQCLL 263
+P F R +AR + + L ++I I RK E ++D L LL
Sbjct: 181 LIPAAVFLPILLKLPLPQSARCHEARTELQKILSEII-IARKEEEVNKDSSTSDLLSGLL 239
Query: 264 AEDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SENE 321
+ AV +D TP L E+ I+ + AGQ T++ TW + +L N
Sbjct: 240 S--AVYRD---------GTPMSL--HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANV 286
Query: 322 EVLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASK 356
+ L+ L+ E +E L ++ MP+A +
Sbjct: 287 KHLEALRKE----IEEFPAQLNYNNVMDEMPFAER 317
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 124/334 (37%), Gaps = 50/334 (14%)
Query: 45 LPLIGETLQFMAAINSSQGFYQFIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNE 104
+P++G +QF S GF Q + R LK G F NI
Sbjct: 25 VPILGHIIQFG---KSPLGFMQECK-RQLKSG-IFTINIVGKRVTIVGDPHEHSRFFLPR 79
Query: 105 GENFTKRYIKS-VGEIVGDNSVLCASTQRHKLIRSRLANLFSLSSLSIFTKQFDQLVLEN 163
E + R + S + + G+ A R + + LA +++ F V +
Sbjct: 80 NEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKF 139
Query: 164 LS-DWEHKAATVVVLREALKVTFKAMCKILLSLESGKELEMLENDVTRVYDAMLAF--PL 220
++ +W+ + +L + + C+ L + K L+ R + +LA
Sbjct: 140 MAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLD------ARRFAQLLAKMESS 193
Query: 221 KLPWTKFY------------RGVKARKRIMRTLEKMINIRRKGL----ETHEDFLQCLLA 264
+P F R +AR + + L ++I R+ + D L LL+
Sbjct: 194 LIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKAAAVNKDSSTSDLLSGLLS 253
Query: 265 EDAVDKDRAXXXXXXXETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYL--SENEE 322
AV +D TP L E+ I+ + AGQ T++ TW + +L N +
Sbjct: 254 --AVYRD---------GTPMSL--HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVK 300
Query: 323 VLDKLKAEHFPLMERTKKSLLTLEDLNRMPYASK 356
L+ L+ E +E L ++ MP+A +
Sbjct: 301 HLEALRKE----IEEFPAQLNYNNVMDEMPFAER 330
>pdb|3USB|A Chain A, Crystal Structure Of Bacillus Anthracis Inosine
Monophosphate Dehydrogenase In The Complex With Imp
pdb|3USB|B Chain B, Crystal Structure Of Bacillus Anthracis Inosine
Monophosphate Dehydrogenase In The Complex With Imp
Length = 511
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 317 LSENEEVLDKLKAEHFPLMERTK--KSLLTLEDLNRM 351
LSE E++L K K E PL++ + L+T++D+ ++
Sbjct: 195 LSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKV 231
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 125/320 (39%), Gaps = 59/320 (18%)
Query: 67 FIQVRHLKYGDCFRTNIFATTNVFFSSTGAAKIILNNEGENFTKR-YIKSVGEIVGDNSV 125
F++ R KYGD F ++ V A + L ++ E F+ R I V V
Sbjct: 36 FLRFRE-KYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGV 94
Query: 126 LCASTQRHKLIRSRLANLFSLSSLSIF----------TKQFDQLVLENLSDWEHKAATVV 175
+ A+ R K++R FS++++ F ++ Q ++E L +
Sbjct: 95 IFANGNRWKVLRR-----FSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGALMDPT 149
Query: 176 VLREALKVTFKAMCKILLS----LESGKELEMLE------NDVTRVYDAMLAFPLKLPWT 225
L ++ +T +C I+ + + L+ML + ++ V+ + F L +
Sbjct: 150 FLFQS--ITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQL--FELFSGFL 205
Query: 226 KFYRGVKARKRIMRTLEKMINIRRKGLETHEDFLQCLLAEDAVDKDRAXXXXXXXETPKK 285
K + G A +++ + L+++ +E H + L D +D E K
Sbjct: 206 KHFPG--AHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLID-----TYLLHMEKEKS 258
Query: 286 LTDEEIQD-----NILTMIIAGQDTTASAITW----MVKYLSENEEV---LDKLKAEHFP 333
E N L++ AG +TT++ + + M+KY E V ++++ H P
Sbjct: 259 NAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRP 318
Query: 334 LMERTKKSLLTLEDLNRMPY 353
L D +MPY
Sbjct: 319 ---------PELHDRAKMPY 329
>pdb|3TSB|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Bacillus Anthracis Str. Ames
pdb|3TSB|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Bacillus Anthracis Str. Ames
pdb|3TSD|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Bacillus Anthracis Str. Ames
Complexed With Xmp
pdb|3TSD|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Bacillus Anthracis Str. Ames
Complexed With Xmp
Length = 511
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 317 LSENEEVLDKLKAEHFPLMERTK--KSLLTLEDLNRM 351
LSE E++L K K E PL++ + L+T++D+ ++
Sbjct: 195 LSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKV 231
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 281 ETPKKLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEE 322
E LTD EI + M+ AG +TT S I V LS + E
Sbjct: 222 ENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPE 263
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 285 KLTDEEIQDNILTMIIAGQDTTASAITWMVKYLSENEEVLDKLKAEHFPLMERTKKSLLT 344
+L+ +E+ + +I AG DTT I + V L + E L+ +KAE LM +L
Sbjct: 238 RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG-LMRNALDEVLR 296
Query: 345 LEDLNRM 351
E++ R+
Sbjct: 297 FENILRI 303
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,715,216
Number of Sequences: 62578
Number of extensions: 316046
Number of successful extensions: 1015
Number of sequences better than 100.0: 100
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 928
Number of HSP's gapped (non-prelim): 113
length of query: 360
length of database: 14,973,337
effective HSP length: 100
effective length of query: 260
effective length of database: 8,715,537
effective search space: 2266039620
effective search space used: 2266039620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)