Query 018134
Match_columns 360
No_of_seqs 45 out of 47
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 10:28:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018134.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018134hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2z3qb1 g.18.1.1 (B:1-78) Inte 49.6 3.2 0.00023 29.8 1.6 25 122-146 37-61 (78)
2 d1jb7a2 b.40.4.3 (A:205-328) T 43.5 1.6 0.00012 35.5 -1.0 11 289-299 29-39 (124)
3 d2o39c1 g.18.1.1 (C:1-62) CD46 25.1 11 0.00077 25.4 0.9 19 126-144 42-61 (62)
4 d1md8a2 g.18.1.1 (A:358-433) C 23.2 6.2 0.00045 27.7 -0.6 21 126-146 51-71 (76)
5 d1elva2 g.18.1.1 (A:342-409) C 19.0 8 0.00059 26.3 -0.8 24 124-147 41-64 (68)
6 d1ok3a1 g.18.1.1 (A:1-64) Comp 18.1 28 0.0021 23.1 2.0 18 127-144 46-63 (64)
7 d2axtj1 f.23.32.1 (J:7-40) Pho 18.0 42 0.003 21.6 2.6 26 245-270 4-30 (34)
8 d1o98a1 c.105.1.1 (A:77-310) 2 17.3 30 0.0022 29.8 2.4 34 118-163 60-93 (234)
9 d1oj5a_ d.110.3.8 (A:) PAS dom 16.9 29 0.0021 24.9 1.9 24 126-149 69-92 (109)
10 d1g40a3 g.18.1.1 (A:127-184) C 16.4 19 0.0014 23.6 0.7 18 126-145 41-58 (58)
No 1
>d2z3qb1 g.18.1.1 (B:1-78) Interleukin-15 receptor subunit alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.57 E-value=3.2 Score=29.76 Aligned_cols=25 Identities=8% Similarity=0.181 Sum_probs=20.1
Q ss_pred CcccceEEEEeeCceeeeeeeeEEE
Q 018134 122 GKTNDIFHCFYDGTWSTIKHSFTIV 146 (360)
Q Consensus 122 g~~~k~~HCf~DGTwsTI~gSCTVV 146 (360)
+.++....|-.||||++.+=+|..+
T Consensus 37 ~~~s~~~~C~~ng~w~~~~~~c~~i 61 (78)
T d2z3qb1 37 AGTSSLTECVLNKATNVAHWTTPSL 61 (78)
T ss_dssp TTCCCEEEEEEETTTTEEEECCCCC
T ss_pred cCCcCcEEeECCCCcccccccCCCC
Confidence 3444588999999999999998654
No 2
>d1jb7a2 b.40.4.3 (A:205-328) Telomere end binding protein alpha subunit {Oxytricha nova [TaxId: 200597]}
Probab=43.45 E-value=1.6 Score=35.45 Aligned_cols=11 Identities=36% Similarity=0.782 Sum_probs=9.2
Q ss_pred hhhhhhccccc
Q 018134 289 LSIYDEYSNDI 299 (360)
Q Consensus 289 va~fDEYtND~ 299 (360)
+.+.||||||+
T Consensus 29 I~e~DeYTnel 39 (124)
T d1jb7a2 29 VHELDEYTNEL 39 (124)
T ss_dssp EEECSSSEEEE
T ss_pred eecchhhccee
Confidence 45789999996
No 3
>d2o39c1 g.18.1.1 (C:1-62) CD46 (membrane cofactor protein, MCP) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.13 E-value=11 Score=25.44 Aligned_cols=19 Identities=16% Similarity=0.284 Sum_probs=14.7
Q ss_pred ceEEEEeeCceeeee-eeeE
Q 018134 126 DIFHCFYDGTWSTIK-HSFT 144 (360)
Q Consensus 126 k~~HCf~DGTwsTI~-gSCT 144 (360)
.-+.|--|||||-+. -.||
T Consensus 42 ~~i~C~~ng~WSp~~~~~C~ 61 (62)
T d2o39c1 42 THTICDRNHTWLPVSDDACY 61 (62)
T ss_dssp SEEECCSSSSCCCCCSTTEE
T ss_pred CEEEECCCCEECCCCCCCcc
Confidence 357899999999764 5676
No 4
>d1md8a2 g.18.1.1 (A:358-433) Complement C1R protease domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.22 E-value=6.2 Score=27.70 Aligned_cols=21 Identities=19% Similarity=0.556 Sum_probs=17.9
Q ss_pred ceEEEEeeCceeeeeeeeEEE
Q 018134 126 DIFHCFYDGTWSTIKHSFTIV 146 (360)
Q Consensus 126 k~~HCf~DGTwsTI~gSCTVV 146 (360)
.-++|--||+||--..+|.++
T Consensus 51 ~~~tC~~~G~Ws~~~p~C~~~ 71 (76)
T d1md8a2 51 GVYTCTAQGIWKNEQKGEKIP 71 (76)
T ss_dssp CEEEECTTSSEECSSCCSSCC
T ss_pred ceeeecCCCcCCCCCCCccCC
Confidence 458999999999988888654
No 5
>d1elva2 g.18.1.1 (A:342-409) Complement C1S protease domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.05 E-value=8 Score=26.31 Aligned_cols=24 Identities=17% Similarity=0.430 Sum_probs=19.0
Q ss_pred ccceEEEEeeCceeeeeeeeEEEe
Q 018134 124 TNDIFHCFYDGTWSTIKHSFTIVR 147 (360)
Q Consensus 124 ~~k~~HCf~DGTwsTI~gSCTVVr 147 (360)
.+.-.+|--||+||--..+|.+++
T Consensus 41 g~~~~~C~~dG~Ws~~~~~c~~p~ 64 (68)
T d1elva2 41 GGGEYHCAGNGSWVNEVLGPELPK 64 (68)
T ss_dssp CCSEEEECTTSCEEBTTTBTSCCC
T ss_pred CccEEEECCCCcCcCCCCCCcCCC
Confidence 446789999999998888876543
No 6
>d1ok3a1 g.18.1.1 (A:1-64) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.08 E-value=28 Score=23.14 Aligned_cols=18 Identities=22% Similarity=0.499 Sum_probs=15.5
Q ss_pred eEEEEeeCceeeeeeeeE
Q 018134 127 IFHCFYDGTWSTIKHSFT 144 (360)
Q Consensus 127 ~~HCf~DGTwsTI~gSCT 144 (360)
-..|--||+||...-.|+
T Consensus 46 ~~~C~~ng~Ws~~~p~C~ 63 (64)
T d1ok3a1 46 SVICLKGSQWSDIEEFCN 63 (64)
T ss_dssp EEEEETTTEECCCCCCEE
T ss_pred cEEeCCCCEECCCCceEc
Confidence 468999999999888886
No 7
>d2axtj1 f.23.32.1 (J:7-40) Photosystem II reaction center protein J, PsbJ {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=17.97 E-value=42 Score=21.59 Aligned_cols=26 Identities=42% Similarity=0.774 Sum_probs=18.2
Q ss_pred HHHHHHHHHH-HHHHHHHHhhhhceeE
Q 018134 245 LWPLAVVGAV-LGSMVTSIFLGAYAGV 270 (360)
Q Consensus 245 LWPl~Vvgav-l~siisS~flG~yaaV 270 (360)
||=.+.++.+ .-+++.-||-|.|+++
T Consensus 4 LWlv~tv~G~~vi~~vG~FfYGsYsGl 30 (34)
T d2axtj1 4 LWIVATVAGMGVIVIVGLFFYGAYAGL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTST
T ss_pred EEEeeehhhhhhHhheeeeeeeeeccc
Confidence 5666655544 3467788999999874
No 8
>d1o98a1 c.105.1.1 (A:77-310) 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=17.31 E-value=30 Score=29.75 Aligned_cols=34 Identities=29% Similarity=0.442 Sum_probs=22.6
Q ss_pred hhccCcccceEEEEeeCceeeeeeeeEEEeeccccccccchhhhHH
Q 018134 118 AVGEGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDD 163 (360)
Q Consensus 118 Avgeg~~~k~~HCf~DGTwsTI~gSCTVVrDf~D~cfHSYfs~mde 163 (360)
|..+|.++-++|+|.|| ||..--+-..|..-+.+
T Consensus 60 a~~~gv~~V~iH~~~DG------------RDt~p~s~~~~l~~l~~ 93 (234)
T d1o98a1 60 AAKEGVKRVYIHGFLDG------------RDVGPQTAPQYIKELQE 93 (234)
T ss_dssp HHHTTCCCEEEEEEECS------------SSSCTTCHHHHHHHHHH
T ss_pred HHHcCCCceEEEEEecC------------CCCCchhHHHHHHHHHH
Confidence 34467777799999999 67666555555444433
No 9
>d1oj5a_ d.110.3.8 (A:) PAS domain of steroid receptor coactivator 1A, NCo-A1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=16.86 E-value=29 Score=24.87 Aligned_cols=24 Identities=13% Similarity=0.065 Sum_probs=19.0
Q ss_pred ceEEEEeeCceeeeeeeeEEEeec
Q 018134 126 DIFHCFYDGTWSTIKHSFTIVRDF 149 (360)
Q Consensus 126 k~~HCf~DGTwsTI~gSCTVVrDf 149 (360)
.+-..=-||+|=.++.+|+++||=
T Consensus 69 ~yR~~~kdG~~vWv~t~~~~~~~~ 92 (109)
T d1oj5a_ 69 SYRFILNDGTMLSAHTRCKLCYPQ 92 (109)
T ss_dssp CEEEECTTSCEEEEEEEEEEECC-
T ss_pred hhhhhhccCcEEEEEEEEEEEECC
Confidence 344455799999999999999973
No 10
>d1g40a3 g.18.1.1 (A:127-184) Complement control protein {Vaccinia virus [TaxId: 10245]}
Probab=16.36 E-value=19 Score=23.61 Aligned_cols=18 Identities=28% Similarity=0.499 Sum_probs=13.8
Q ss_pred ceEEEEeeCceeeeeeeeEE
Q 018134 126 DIFHCFYDGTWSTIKHSFTI 145 (360)
Q Consensus 126 k~~HCf~DGTwsTI~gSCTV 145 (360)
+...|- ||+||.. -.|.|
T Consensus 41 ~~~~C~-~g~Ws~~-P~C~v 58 (58)
T d1g40a3 41 SGVLCS-GGEWSDP-PTCQI 58 (58)
T ss_dssp SSEEES-SSCBCSC-CEEES
T ss_pred CccEeC-CCccCCC-CceeC
Confidence 458996 9999974 77764
Done!