BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018136
(360 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94K01|DBR1_ARATH Lariat debranching enzyme OS=Arabidopsis thaliana GN=DBR1 PE=2 SV=1
Length = 418
Score = 491 bits (1263), Expect = e-138, Method: Compositional matrix adjust.
Identities = 242/335 (72%), Positives = 275/335 (82%), Gaps = 2/335 (0%)
Query: 1 MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG 60
M+SLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAA NIYFLG
Sbjct: 49 MDSLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAATNIYFLG 108
Query: 61 FAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPI 120
FAGVVKFGN+RIGGLSGIYN RHYR GH+ERPPYNESTIRSVYHVR+YDV KLMQ+EEP+
Sbjct: 109 FAGVVKFGNVRIGGLSGIYNERHYRSGHFERPPYNESTIRSVYHVRDYDVQKLMQLEEPL 168
Query: 121 DIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 180
DIFLSHDWP GITDYG+ + L+R K YF +EI++ TLGS+PAA LLEKLKP YWFSAHLH
Sbjct: 169 DIFLSHDWPVGITDYGDSESLMRQKPYFRQEIEEKTLGSKPAALLLEKLKPQYWFSAHLH 228
Query: 181 CKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNS 240
CKFAA VQHG D VTKFLALDKCLP +KFLQ+ EIES GP+E+ YDEEWLAITR FNS
Sbjct: 229 CKFAAAVQHGNDGSVTKFLALDKCLPGKKFLQIIEIESEPGPFEVLYDEEWLAITRKFNS 288
Query: 241 VFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAEN 300
+FPLT + N + + R+WVR +L+ER KPFEF RTVP Y+ SQ + + E
Sbjct: 289 IFPLTRRYTNV-STAGTIQESREWVRKKLEERQFKPFEFARTVPAYNPSQRV-FDSIPEI 346
Query: 301 PQNPQTESFLQFLELPNLFENALESREPTQSPATL 335
PQNPQT S L+ L LP L +++ + E T PA+L
Sbjct: 347 PQNPQTLSLLELLGLPYLLDSSPVTGERTDIPASL 381
>sp|Q6AU07|DBR1_ORYSJ Lariat debranching enzyme OS=Oryza sativa subsp. japonica GN=DBR1
PE=2 SV=1
Length = 407
Score = 464 bits (1193), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/309 (71%), Positives = 250/309 (80%)
Query: 1 MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG 60
++ LNV ++REMKSFWKYYSGQ VAP PTIFIGGNHEASNYLWELYYGGWAAPNIYFLG
Sbjct: 49 LQCLNVKPRFREMKSFWKYYSGQAVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG 108
Query: 61 FAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPI 120
FAGVVKFGNIRIGGLSGIY +HY LGHYERPPYNE+TIRSVYHVR YDV KLM ++EP+
Sbjct: 109 FAGVVKFGNIRIGGLSGIYKQQHYHLGHYERPPYNENTIRSVYHVRHYDVLKLMHVKEPL 168
Query: 121 DIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 180
DIF+SHDWP GIT+YGN ++L+R K++FE+E+ TLGSEPAA+LL KLKP YWFSAHLH
Sbjct: 169 DIFMSHDWPLGITEYGNWQKLIREKRFFEEEVNKRTLGSEPAARLLNKLKPPYWFSAHLH 228
Query: 181 CKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNS 240
CKF AV+QHGE P TKFLALDKCLPRR FLQV +I SG GP+EIQYDEEWLAITR FN+
Sbjct: 229 CKFPAVIQHGEGGPTTKFLALDKCLPRRGFLQVIDIPSGPGPHEIQYDEEWLAITRKFNN 288
Query: 241 VFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAEN 300
VF LT Q D D QWVR++L RGAKP +FV+T YD S S + +
Sbjct: 289 VFSLTRMPFTMLDEQVDTQDDLQWVRNKLNARGAKPIDFVQTAASYDPSCQASNPSITVH 348
Query: 301 PQNPQTESF 309
+NPQTESF
Sbjct: 349 CRNPQTESF 357
>sp|Q6P886|DBR1_XENTR Lariat debranching enzyme OS=Xenopus tropicalis GN=dbr1 PE=2 SV=1
Length = 534
Score = 327 bits (837), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/362 (46%), Positives = 233/362 (64%), Gaps = 15/362 (4%)
Query: 1 MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG 60
M+ + VP+KYR+M++F+KYYSG+++API TIFIGGNHEASNYL EL YGGW APNIY++G
Sbjct: 49 MKCMAVPQKYRQMQTFYKYYSGEKLAPILTIFIGGNHEASNYLQELPYGGWVAPNIYYVG 108
Query: 61 FAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPI 120
+AGVVK+ +RIGG+SGI+ + YR GH+ERPPY++ T+RS YHVR +V +L Q++EP+
Sbjct: 109 YAGVVKYRGVRIGGISGIFKSHDYRKGHFERPPYSKDTVRSAYHVRNIEVFRLKQLKEPM 168
Query: 121 DIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 180
DIF+SHDWP I YGN K+L++ K +F +E+++ TLGS A++LL ++PSYWFSAHLH
Sbjct: 169 DIFMSHDWPRSIYHYGNKKQLLKKKDFFRQEVENNTLGSPAASELLLHIQPSYWFSAHLH 228
Query: 181 CKFAAVVQH-----GEDSPVTKFLALDKCLPRRKFLQVFEIESGQG-PYEIQYDEEWLAI 234
KFAA +QH GE TKFLALDKCLP R+FLQ+ ++E G P ++YD EWLA+
Sbjct: 229 VKFAAFMQHQTNVEGEIPKATKFLALDKCLPHREFLQIVDVEHDPGKPDCLEYDLEWLAV 288
Query: 235 TRTFNSVFPLTSQSANF---GGVQH--DMNDCRQWVRSRLQERGAK---PFEFVRTVPCY 286
+ + +TS++ N G+ D + + R L + G P F T CY
Sbjct: 289 LKATKDLLNITSKTWNMPENNGLHSRWDFSASEKTKREILDDLGHDIKIPCNFCMTTACY 348
Query: 287 DASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESREPTQSPATLDHKGPDLDPEE 346
D + A + NPQT F L L +L + E T D++ + E
Sbjct: 349 DPNNP-QYKRVATHIVNPQTTEFCARLGLVDLNAKIRQHEEEGDIDITEDNEADSIGSAE 407
Query: 347 IP 348
P
Sbjct: 408 DP 409
>sp|Q6GPB8|DBR1A_XENLA Lariat debranching enzyme A OS=Xenopus laevis GN=dbr1-a PE=2 SV=1
Length = 534
Score = 323 bits (828), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/340 (49%), Positives = 222/340 (65%), Gaps = 32/340 (9%)
Query: 1 MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG 60
M+ + VP KYR+M++F+KYYSG++ API TIFIGGNHEASNYL EL YGGW APNIY++G
Sbjct: 49 MKCMAVPMKYRQMQTFYKYYSGEKKAPILTIFIGGNHEASNYLQELPYGGWVAPNIYYMG 108
Query: 61 FAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPI 120
+AGVVK+ +RIGG+SGI+ + YR GH+ERPPY++ T+RS YHVR +V KL Q++EP+
Sbjct: 109 YAGVVKYRGVRIGGISGIFKSHDYRKGHFERPPYSKDTVRSAYHVRSIEVFKLKQLKEPM 168
Query: 121 DIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 180
DIFLSHDWP I YGN K+L++ K +F +E++D TLGS A++LL ++PSYWFSAHLH
Sbjct: 169 DIFLSHDWPRSIYHYGNKKQLLKKKDFFRQEVEDNTLGSPAASELLLHIQPSYWFSAHLH 228
Query: 181 CKFAAVVQH----GEDSPVTKFLALDKCLPRRKFLQVFEIESG-QGPYEIQYDEEWLAIT 235
KFAA +QH GE TKFLALDKCLP R+FLQ+ ++E P ++YD EWLA+
Sbjct: 229 VKFAAFMQHQNNVGEIPKATKFLALDKCLPHREFLQIVDMEHDPSKPECLEYDLEWLAVL 288
Query: 236 RTFNSVFPLTSQSANF---GGVQH--DMNDCRQWVRSRLQERGAK---PFEFVRTVPCYD 287
+ + +TS++ N G+ D + + R L + G P F T CYD
Sbjct: 289 KATKDLLNITSKTWNMPENNGLHARWDFSMSEETKREVLDDLGHDIKIPCNFSVTTACYD 348
Query: 288 ASQSLSIGAFAENPQ---------NPQTESFLQFLELPNL 318
+ NPQ NPQT F L L +L
Sbjct: 349 PN----------NPQYKRMPTHIVNPQTTEFCARLGLVDL 378
>sp|Q7ZWU9|DBR1B_XENLA Lariat debranching enzyme B OS=Xenopus laevis GN=dbr1-b PE=2 SV=1
Length = 533
Score = 320 bits (820), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 171/367 (46%), Positives = 228/367 (62%), Gaps = 18/367 (4%)
Query: 1 MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG 60
M+ + VP KYR+M++F+KYYSG++ API TIFIGGNHEASNYL EL YGGW APNIY++G
Sbjct: 49 MKCMAVPVKYRQMQTFYKYYSGEKKAPILTIFIGGNHEASNYLQELPYGGWVAPNIYYMG 108
Query: 61 FAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPI 120
+AGVVK+ +RIGG+SGI+ + YR GH+ER PY + T+RS YHVR +V KL Q++EP+
Sbjct: 109 YAGVVKYRGVRIGGISGIFKSHDYRKGHFERLPYGKDTVRSAYHVRSIEVFKLKQLKEPM 168
Query: 121 DIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 180
DIFLSHDWP I YGN K+L++ K +F +E++D TLGS A++LL ++PSYWFSAHLH
Sbjct: 169 DIFLSHDWPRSIYHYGNKKQLLKKKDFFRQEVEDNTLGSPAASELLLHIQPSYWFSAHLH 228
Query: 181 CKFAAVVQH-----GEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYE-IQYDEEWLAI 234
KFAA +QH GE TKFLALDKCLPRR+FLQ+ ++E E ++YD EWL++
Sbjct: 229 VKFAAFMQHQTNVDGEIPKATKFLALDKCLPRREFLQIVDVEHDSAKSECLEYDLEWLSV 288
Query: 235 TRTFNSVFPLTSQSANF---GGVQH--DMNDCRQWVRSRLQERGAK---PFEFVRTVPCY 286
+ + +T + N G+ D + + R + + G P F T CY
Sbjct: 289 LKATKDLLNITPNTWNMPENNGLHSRWDFSASEETKREVVSDLGHDLKIPCNFSMTTACY 348
Query: 287 DASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESREPTQSPA---TLDHKGPDLD 343
D + A + NPQT F L L +L ++ E A D G D
Sbjct: 349 DPNNP-QYKRVATHIVNPQTTEFCARLGLVDLNAKICQNEEENFDIAEDNEADSIGSAED 407
Query: 344 PEEIPID 350
P E D
Sbjct: 408 PGEYSTD 414
>sp|Q9UK59|DBR1_HUMAN Lariat debranching enzyme OS=Homo sapiens GN=DBR1 PE=1 SV=2
Length = 544
Score = 320 bits (819), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/345 (47%), Positives = 221/345 (64%), Gaps = 23/345 (6%)
Query: 1 MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG 60
+ + VP KYR M++F++YYSG++ AP+ T+FIGGNHEASN+L EL YGGW APNIY+LG
Sbjct: 49 LRCMAVPPKYRHMQTFYRYYSGEKKAPVLTLFIGGNHEASNHLQELPYGGWVAPNIYYLG 108
Query: 61 FAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPI 120
AGVVK+ +RIGG+SGI+ + YR GH+E PPYN STIRS+YHVR +V+KL Q+++PI
Sbjct: 109 LAGVVKYRGVRIGGISGIFKSHDYRKGHFECPPYNSSTIRSIYHVRNIEVYKLKQLKQPI 168
Query: 121 DIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 180
DIFLSHDWP I YGN K+L++ K +F +E+++ TLGS A++LLE LKP+YWFSAHLH
Sbjct: 169 DIFLSHDWPRSIYHYGNKKQLLKTKSFFRQEVENNTLGSPAASELLEHLKPTYWFSAHLH 228
Query: 181 CKFAAVVQH-----GEDSPVTKFLALDKCLPRRKFLQVFEIESG-QGPYEIQYDEEWLAI 234
KFAA++QH G+ + TKFLALDKCLP R FLQ+ EIE P ++YD EWL I
Sbjct: 229 VKFAALMQHQAKDKGQTARATKFLALDKCLPHRDFLQILEIEHDPSAPDYLEYDIEWLTI 288
Query: 235 TRTFNSVFPLTSQSAN------------FGGVQHDMNDCRQWVRSRLQERGAKPFEFVRT 282
R + + +T + N + + M + V +L P F T
Sbjct: 289 LRATDDLINVTGRLWNMPENNGLHARWDYSATEEGMKE----VLEKLNHDLKVPCNFSVT 344
Query: 283 VPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESRE 327
CYD S+ + NPQT F L + ++ +S+E
Sbjct: 345 AACYDPSKPQTQMQLIHRI-NPQTTEFCAQLGIIDINVRLQKSKE 388
>sp|Q7T3E4|DBR1_DANRE Lariat debranching enzyme OS=Danio rerio GN=dbr1 PE=1 SV=1
Length = 568
Score = 317 bits (811), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 163/333 (48%), Positives = 217/333 (65%), Gaps = 21/333 (6%)
Query: 1 MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG 60
M+ + VP KYR M++F+KYYSG++ AP+ TIFIGGNHEASN+L EL YGGW APNIY+LG
Sbjct: 49 MKCMAVPAKYRHMQTFYKYYSGEKKAPVLTIFIGGNHEASNHLQELPYGGWVAPNIYYLG 108
Query: 61 FAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPI 120
+AGV+++ +RIGGLSGI+ + ++ GH+E PPYN T+RSVYH+R DV KL QI+ PI
Sbjct: 109 YAGVIRYKGVRIGGLSGIFKSHDFKKGHFEFPPYNPETLRSVYHIRNIDVFKLKQIKMPI 168
Query: 121 DIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 180
DIF++HDWP GI YGN L+R K++ +E++ TLGS AA LLE L+PSYWFSAHLH
Sbjct: 169 DIFMTHDWPRGIYHYGNTNALLRQKKFLRQEVESSTLGSPAAADLLEHLQPSYWFSAHLH 228
Query: 181 CKFAAVVQH---GEDSP-VTKFLALDKCLPRRKFLQVFEIESGQGPYE-IQYDEEWLAIT 235
KFAA++QH +P +TKFL+LDKCLP R FLQ+ E+ G E ++YD EWLAI
Sbjct: 229 VKFAALMQHEAKNNTAPKITKFLSLDKCLPHRDFLQIVEVADRPGSSEQLEYDPEWLAIL 288
Query: 236 RTFNSVFPLTSQSANFGGVQHDMNDCRQW-----------VRSRLQERGAKPFEFVRTVP 284
+ ++ L + NF D +W V S L P F TVP
Sbjct: 289 KATDN---LQKPTCNFWNPPQDNGLHSRWDFSASEEAMMEVVSDLSGDLCIPENFSLTVP 345
Query: 285 CYDASQSL--SIGAFAENPQNPQTESFLQFLEL 315
YD SQ ++ A++ NPQ + + L ++
Sbjct: 346 PYDPSQPQPHALPAYSTNPQTTELCATLNLTDI 378
>sp|Q923B1|DBR1_MOUSE Lariat debranching enzyme OS=Mus musculus GN=Dbr1 PE=1 SV=2
Length = 550
Score = 314 bits (805), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 161/345 (46%), Positives = 217/345 (62%), Gaps = 23/345 (6%)
Query: 1 MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG 60
+ + VP KYR M++F++YYSG++ AP+ TIFIGGNHEASN+L EL YGGW APNIY+LG
Sbjct: 49 LRCMAVPPKYRHMQTFYRYYSGEKKAPVLTIFIGGNHEASNHLQELPYGGWVAPNIYYLG 108
Query: 61 FAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPI 120
AGVVK+ +RIGG+SGI+ + YR GH+E PPYN STIRS+YHVR +V+KL Q+++P+
Sbjct: 109 LAGVVKYRGVRIGGISGIFKSHDYRKGHFECPPYNSSTIRSIYHVRNIEVYKLKQLKQPV 168
Query: 121 DIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 180
IFLSHDWP I YGN K+L++ K +F +E+++ TLGS A++LLE L+P+YWFSAHLH
Sbjct: 169 HIFLSHDWPRNIYHYGNKKQLLKTKSFFRQEVENSTLGSPAASELLEHLQPAYWFSAHLH 228
Query: 181 CKFAAVVQH-----GEDSPVTKFLALDKCLPRRKFLQVFEIESG-QGPYEIQYDEEWLAI 234
KFAA++QH + TKFLALDKCLP R FLQV EIE P ++YD EWL +
Sbjct: 229 VKFAALMQHQATDKDQAGKETKFLALDKCLPHRDFLQVLEIEHDPSAPEYLEYDVEWLTV 288
Query: 235 TRTFNSVFPLTSQSAN------------FGGVQHDMNDCRQWVRSRLQERGAKPFEFVRT 282
R + + +T N + + M + V +L P F T
Sbjct: 289 LRATDDLINVTGGLWNMPEDNGLHTRWDYSATEETMKE----VMEKLNHDPKVPCNFTMT 344
Query: 283 VPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESRE 327
CYD S+ + NPQT F L + ++ ++RE
Sbjct: 345 AACYDPSKPQTQVKLVHRI-NPQTTEFCAQLGITDINVMIQKARE 388
>sp|Q5ZLM2|DBR1_CHICK Lariat debranching enzyme OS=Gallus gallus GN=DBR1 PE=2 SV=1
Length = 536
Score = 313 bits (801), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/394 (42%), Positives = 236/394 (59%), Gaps = 37/394 (9%)
Query: 1 MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG 60
+ + VP KYR M++F++YYSG++ AP+ T+FIGGNHEASN+L EL YGGW APNIY+LG
Sbjct: 49 LRCMAVPAKYRHMQTFYRYYSGEKKAPVLTVFIGGNHEASNHLQELPYGGWVAPNIYYLG 108
Query: 61 FAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPI 120
+AGVV+F +RIGG+SGI+ + YR GH+E PPYN+ TIRS YHVR +V KL Q++ P+
Sbjct: 109 YAGVVRFRGVRIGGISGIFKSHDYRKGHFECPPYNQQTIRSAYHVRNIEVFKLKQLKHPM 168
Query: 121 DIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 180
DIF+SHDWP I YGN K+L++ K +F +E++ TLGS A++LL+ LKP+YWFSAHLH
Sbjct: 169 DIFMSHDWPQSIYHYGNKKQLLKMKSFFRQEVESNTLGSPAASELLQHLKPNYWFSAHLH 228
Query: 181 CKFAAVVQHGEDS-----PVTKFLALDKCLPRRKFLQVFEIESG-QGPYEIQYDEEWLAI 234
KFAA +QH S TKFLALDKCLP R FLQ+ +IE ++YD EW+A+
Sbjct: 229 VKFAAFMQHETKSKEELPKATKFLALDKCLPHRDFLQIIDIEHDPTAGDSLEYDAEWIAV 288
Query: 235 TRTFNSVFPLTSQS-----ANFGGVQHDMNDCRQWVRSRLQERGAK---PFEFVRTVPCY 286
+ NS+ +T S N + D + + ++ L+E P F T CY
Sbjct: 289 LKATNSLINVTQSSWSVPENNGLHAKWDYSATEEAIKEVLEELNHNLKIPCNFTLTTTCY 348
Query: 287 DASQSLSIGAFAENPQNPQTESFLQFLELPNLFEN-------------------ALESRE 327
D S+ + NPQT F L ++ + ++S
Sbjct: 349 DPSKPQK-NMEPVHTINPQTTEFCAQFGLTDINDRIQQVKEEGSVRGEYEEEEEEMDSSG 407
Query: 328 PTQSPA--TLDHKG-PDLDPEEIPIDDEDELEEL 358
+ P+ D+ G ++P+EI +DDE E+L
Sbjct: 408 SAEEPSEYNTDNSGLSSINPDEIMLDDEGGDEDL 441
>sp|Q9VSD7|DBR1_DROME Lariat debranching enzyme OS=Drosophila melanogaster GN=ldbr PE=1
SV=1
Length = 534
Score = 297 bits (761), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 160/370 (43%), Positives = 219/370 (59%), Gaps = 62/370 (16%)
Query: 1 MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG 60
++++ VP+KY +M SF+KYYSG+ VAP+ TIFIGGNHEASNYL EL YGGW APNIY+LG
Sbjct: 49 LQTMAVPKKYLDMCSFYKYYSGELVAPVLTIFIGGNHEASNYLQELPYGGWVAPNIYYLG 108
Query: 61 FAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPI 120
+AGVV +RI G+SGI+ + GH+E PPY +ST RSVYHVR+ +V +L QI +
Sbjct: 109 YAGVVNVNGVRIAGISGIFKGHDFLRGHHEFPPYTDSTCRSVYHVRQLEVFRLKQISGRV 168
Query: 121 DIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 180
DIFLSHDWP GI +YGN +L+R K +F +++ G LGS+P +LL+ ++P+YWF+AHLH
Sbjct: 169 DIFLSHDWPTGIYEYGNKAQLLRKKPFFAADMESGKLGSQPLEELLKAVQPAYWFAAHLH 228
Query: 181 CKFAAVVQHGEDSPV-------------------------------------TKFLALDK 203
CKFAA+V H + TKFLALDK
Sbjct: 229 CKFAALVPHNHSQKLGDAESSSSSSSSEDEDEEREKVKKAAPVPPPSKSVPVTKFLALDK 288
Query: 204 CLPRRKFLQVFEIESG--QGPYEIQYDEEWLAITRTFNSVFPLT--------------SQ 247
CLPRR FLQV E+ S +G ++YD EWLAI + N + + ++
Sbjct: 289 CLPRRAFLQVVEVPSDPIEGTPRLEYDAEWLAILHSTNHLISVKENYYYLPGKKAGEFTE 348
Query: 248 SANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYD-ASQSLSIGAFAENPQ---N 303
+NF + ++ + V ++ Q+ P F RTVP +D A QS F + P+ N
Sbjct: 349 RSNFTPTEEEL----EAVTAKFQKLQV-PENFERTVPAFDPAEQSDYKHMFVDQPKVQLN 403
Query: 304 PQTESFLQFL 313
PQ+ +F L
Sbjct: 404 PQSNTFCATL 413
>sp|Q29FE1|DBR1_DROPS Lariat debranching enzyme OS=Drosophila pseudoobscura pseudoobscura
GN=DBR1 PE=3 SV=2
Length = 537
Score = 291 bits (744), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 157/369 (42%), Positives = 213/369 (57%), Gaps = 62/369 (16%)
Query: 1 MESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG 60
++++ VP+KY ++ +F+KYYSG+ VAP+ TIFIGGNHEASNYL EL YGGW APNIY+LG
Sbjct: 49 LQTMAVPKKYLDICTFYKYYSGECVAPVLTIFIGGNHEASNYLQELPYGGWVAPNIYYLG 108
Query: 61 FAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPI 120
+AGVV +RI G+SGIY + GH+E PPY EST RSVYHVR+ +V +L Q+ I
Sbjct: 109 YAGVVNVNGVRIAGISGIYKGHDFLRGHHEFPPYTESTCRSVYHVRQLEVFRLKQLSGKI 168
Query: 121 DIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 180
DIFLSHDWP GI +YGN +L+R K YF +++ G LGS P +LL+ ++PSYWF+AHLH
Sbjct: 169 DIFLSHDWPTGIYEYGNKAQLLRKKPYFAADMESGQLGSRPLEELLKAVQPSYWFAAHLH 228
Query: 181 CKFAAVVQHGEDS-----------------------------------PVTKFLALDKCL 205
CKFAA+V H + VTKFLALDKCL
Sbjct: 229 CKFAALVPHQNATKAPTKMGDGSSSSSSSSSSESDDEESTSRLPPKPVAVTKFLALDKCL 288
Query: 206 PRRKFLQVFEI--ESGQGPYEIQYDEEWLAITRTFNSVFPL--------------TSQSA 249
PRR FLQV +I E+ +G +YD EWL I ++ N + + ++
Sbjct: 289 PRRAFLQVLDIPSEAIEGNPTFEYDAEWLVILQSTNHLISVKENYYYLPGKKAGAIAERF 348
Query: 250 NFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQS-----LSIGAFAENPQNP 304
NF + +++ +S P F RTVP +D + + +G + NP
Sbjct: 349 NFTPTEEELDSLTTKFQSL-----KIPENFQRTVPAFDPQEQSNYKHMVVGQPTAH-LNP 402
Query: 305 QTESFLQFL 313
Q+ +F L
Sbjct: 403 QSNTFCSVL 411
>sp|Q966M6|DBR1_CAEEL Lariat debranching enzyme OS=Caenorhabditis elegans GN=dbr-1 PE=3
SV=2
Length = 500
Score = 245 bits (625), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 144/386 (37%), Positives = 215/386 (55%), Gaps = 43/386 (11%)
Query: 4 LNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAG 63
+++P KYR +++F+KYYSG++ AP+ T+FIGGNHEAS YL EL GGW APNIY++GFA
Sbjct: 92 MSIPPKYRSLQTFYKYYSGEQKAPVLTLFIGGNHEASGYLCELPNGGWVAPNIYYMGFAN 151
Query: 64 VVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQ-------- 115
++F N+RI GLSGI++ ++ HYERP ++E ++S YHVR D+ +L Q
Sbjct: 152 CIRFANLRIAGLSGIFSQGDFQFSHYERPSFSERDVKSAYHVRNVDMFRLRQLKSDNENK 211
Query: 116 IEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWF 175
I PIDI LSHDWP GI D+G+ + L R K FE + G LG+ +L+ +P Y+
Sbjct: 212 ISNPIDIMLSHDWPGGIPDFGDKEWLFRKKDLFEADHNSGKLGNPSGMKLIYDCRPRYYL 271
Query: 176 SAHLHCKFAAVVQH---GEDSPV-TKFLALDKCLPRRKFLQVFEIE-SGQGPYEIQYDEE 230
+AHLH FAA+V H G P T+FL+LDK +P RKF+Q E+ + E+ YD +
Sbjct: 272 AAHLHIAFAALVPHKGSGSGRPQPTRFLSLDKPIPGRKFMQALELNVADDAKLELSYDPQ 331
Query: 231 WLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSR---------------LQERGAK 275
WLAI R + + T + + DM R V R L + +
Sbjct: 332 WLAILRNTDLLTTGTKEQL----ILPDMASNRPCVYERKDFRPTAEELKEIEKLGDLTIR 387
Query: 276 PFEFVRTVP----CYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALE-SREPTQ 330
F +T P ++S+++ A+ +NPQ+ F Q+L + +L + +E + E
Sbjct: 388 TDSFQQTAPPLKEITESSKNVPPSAYY---RNPQSAEFCQWLGIRDLNQMLVEKTSEHVG 444
Query: 331 SP---ATLDHKGPDLDPEEIPIDDED 353
+P T D + +++ DED
Sbjct: 445 TPYYMMTQDDANAKPNQDDVDFGDED 470
>sp|Q61D44|DBR1_CAEBR Lariat debranching enzyme OS=Caenorhabditis briggsae GN=dbr-1 PE=3
SV=1
Length = 511
Score = 239 bits (609), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 136/343 (39%), Positives = 198/343 (57%), Gaps = 31/343 (9%)
Query: 4 LNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAG 63
+++P KYR +++F+KYYSG++ AP+ T+FIGGNHEAS +L EL GGW APNI+++GFA
Sbjct: 96 MSIPPKYRSLQTFYKYYSGEKKAPVLTLFIGGNHEASGFLCELPNGGWVAPNIFYMGFAN 155
Query: 64 VVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIE------ 117
++F +RI GLSGIY+ HYERP + E ++S YHVR D+ +L Q++
Sbjct: 156 CIQFAGLRIAGLSGIYSHGDVEFSHYERPAFAERDVKSAYHVRNVDMFRLRQLKAANNDK 215
Query: 118 --EPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWF 175
PIDI LSHDWP GI D+G+ L + K FE + + G LG+ +L+ +P Y+
Sbjct: 216 LSNPIDIMLSHDWPGGIPDFGDSAWLFKKKDLFEADHKSGKLGNPALMKLIYDCRPRYYL 275
Query: 176 SAHLHCKFAAVVQH---GEDSPV-TKFLALDKCLPRRKFLQVFEIE-SGQGPYEIQYDEE 230
+AHLH KFAA+V H G + P T+FL+LDK +P R+F+Q EI + E+ YD E
Sbjct: 276 AAHLHIKFAALVPHKGSGSERPQPTRFLSLDKPIPGRQFMQALEINVASDAKMELSYDPE 335
Query: 231 WLAITRTFNSVFPLTSQSAN------FGGVQ--HDMNDCRQWVR-----SRLQERGAKPF 277
WLAI + N+ T+ G V +D D R ++L + K
Sbjct: 336 WLAILK--NTDLLTTADKTKIVLPDRIGSVPCVYDRKDFRPTAEEMEEITKLGDLTIKTD 393
Query: 278 EFVRTVPCY--DASQSLSIGAFAENPQNPQTESFLQFLELPNL 318
F T P D S++ ++ A +NPQ+ F Q+L + +L
Sbjct: 394 TFKHTAPPLKEDTSEAKNVPPSAYY-RNPQSAEFCQWLGIKDL 435
>sp|O13765|DBR1_SCHPO Lariat debranching enzyme OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=dbr1 PE=3 SV=2
Length = 478
Score = 224 bits (571), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 134/186 (72%)
Query: 4 LNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAG 63
+++P K++ + F+ YY+G+ API TIF+GGNHEASNYL EL YGGW APNIY++G +
Sbjct: 61 ISMPPKFKRLGDFFNYYNGRNKAPILTIFVGGNHEASNYLDELPYGGWVAPNIYYMGRSS 120
Query: 64 VVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIF 123
V+ G +RI G+SGIY+A Y+ G YE PYN ++S+YH RE+DV L +++PIDIF
Sbjct: 121 VINVGGLRIAGISGIYSAMDYKKGRYEGLPYNYKMLKSIYHTREFDVLSLKSLQKPIDIF 180
Query: 124 LSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKF 183
LSHDWP GI +G+ +L+RHK +F E++ LGS +LL +LKP YW +AHLH KF
Sbjct: 181 LSHDWPRGIEQHGDVAKLLRHKPFFRNEVERNDLGSPALEELLVELKPRYWMAAHLHTKF 240
Query: 184 AAVVQH 189
AVV H
Sbjct: 241 TAVVHH 246
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 27/154 (17%)
Query: 195 VTKFLALDKCLPRRKFLQVFEIE-----SGQGPYEIQYDEEWLAITRTFNSVFPLTSQSA 249
VTKFLALDKCLPRR + +V EIE PY +QYD EWL++ R ++ P S +
Sbjct: 331 VTKFLALDKCLPRRSYFEVVEIEPVEIPDSGAPY-MQYDSEWLSVLR---AMHPFQSHTI 386
Query: 250 -------NFGGVQHDMNDCRQWVRSRL--QERGAKPFEFVRTVPCY--DASQSLSIGAFA 298
+ V+ WV L +++ P F +T P + D ++++ ++
Sbjct: 387 EQDPPLPSLEVVKTLKRKEEIWVDENLVKKDKLGIPRNFCQTAPPHSRDITENMQPSSYI 446
Query: 299 ENPQNPQTESFLQFLELPNLFENALESREPTQSP 332
NPQT +F + L E ++S P ++P
Sbjct: 447 ----NPQTVAFEILI---GLKERTVDSPPPVKNP 473
>sp|P24309|DBR1_YEAST Lariat debranching enzyme OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=DBR1 PE=1 SV=1
Length = 405
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 151/268 (56%), Gaps = 55/268 (20%)
Query: 2 ESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGF 61
+S+ +P KY+ + F YY+ + AP+PTIFIGGNHE+ +L L +GG+ A NI+++G+
Sbjct: 51 KSIAIPPKYQRLGDFISYYNNEIEAPVPTIFIGGNHESMRHLMLLPHGGYVAKNIFYMGY 110
Query: 62 AGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNE-------STIRSVYHVREYDVHKLM 114
+ V+ F IRIG LSGI+ + + +RP +N+ + IR++YHVR D+ L
Sbjct: 111 SNVIWFKGIRIGSLSGIWKEWDF---NKQRPDWNDLENNNWKANIRNLYHVRISDIAPLF 167
Query: 115 QIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYW 174
I+ IDI LSHDWP G+ +G+ K L++ K +FE++I++G LGS QLL L+P +W
Sbjct: 168 MIKHRIDIMLSHDWPNGVVYHGDTKHLLKLKPFFEQDIKEGKLGSPVTWQLLRDLRPQWW 227
Query: 175 FSAHLHCKFAAVVQHGEDS----------------------------------------- 193
SAHLH +F A ++H + S
Sbjct: 228 LSAHLHVRFMASIKHNKRSHEPPNKSTSKTKKNNNEIDLDLSSDEDERSGIMNCQEENEY 287
Query: 194 ----PVTKFLALDKCLPRRKFLQVFEIE 217
T+FLALDKCLPRR++L++ EIE
Sbjct: 288 DSKYGETRFLALDKCLPRRRWLEILEIE 315
>sp|Q8AVL0|C19L1_XENLA CWF19-like protein 1 OS=Xenopus laevis GN=cwf19l1 PE=2 SV=1
Length = 540
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 43/222 (19%)
Query: 12 EMKSFW-KYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGN- 69
E ++ W +Y SG + API T +G N++ + ++ G A NI +LG G+ +
Sbjct: 50 ESQTHWDEYKSGAKKAPIQTYVLGANNQETVKHFKDVDGCELAANITYLGRKGLFTGASG 109
Query: 70 IRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIE--EPIDIFLSHD 127
++I LSGI ++ E P T + V ++ LM + +DI L+
Sbjct: 110 LQIAYLSGIESSS-------EPAPAYCFTAKDVTSLK----MSLMSNSKFKGVDILLTSS 158
Query: 128 WPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSA---------- 177
WP +++YGN K+ GS + L LKP Y F+A
Sbjct: 159 WPKDVSNYGNALPNEASKK----------CGSALISNLAFNLKPRYHFAALEGENYERLP 208
Query: 178 -HLHCKFAAVVQHGEDSPVTKFLALDKC--LPRRKFLQVFEI 216
H QH V++F++L L ++K++ F I
Sbjct: 209 YRNHLVLQENAQH-----VSRFISLASVGNLDKKKYIYAFNI 245
>sp|Q5RGJ5|C19L1_DANRE CWF19-like protein 1 OS=Danio rerio GN=cwf19l1 PE=2 SV=1
Length = 544
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 88/218 (40%), Gaps = 36/218 (16%)
Query: 12 EMKSFWKYY-SGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGN- 69
E ++ W Y SG + API T +G + + + G A NI LG G+ +
Sbjct: 50 EAEAEWATYKSGAKKAPIHTCILGAASQETVKYFPSSDGCELAENITCLGRRGIFTGASG 109
Query: 70 IRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEE--PIDIFLSHD 127
++I +SG R H E P + T + + + V L+ + +DI L+
Sbjct: 110 LQIAYVSG-------REAHQEPAPSHCFTPKDITAL----VAPLLSNSKFRGVDILLTSQ 158
Query: 128 WPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSA-------HLH 180
WP G+ YGN E G A L +KLKP Y F+ L
Sbjct: 159 WPRGVCQYGN-----------SPETDMKFCGVSSIADLADKLKPRYHFAGLEGVHYERLP 207
Query: 181 CKFAAVVQHGEDSPVTKFLALDKC--LPRRKFLQVFEI 216
+ V+Q V++F+AL ++K+L F I
Sbjct: 208 YRNHVVLQENTQH-VSRFIALATVNNPAKKKYLYAFNI 244
>sp|Q5R8R4|C19L1_PONAB CWF19-like protein 1 OS=Pongo abelii GN=CWF19L1 PE=2 SV=1
Length = 538
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 18 KYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGV-VKFGNIRIGGLS 76
+Y +G + API T +G N++ + ++ G A NI +LG G+ ++I LS
Sbjct: 55 EYKTGTKKAPIQTYVLGANNQETVKYFQDADGCELAENITYLGRKGIFTGSSGLQIVYLS 114
Query: 77 GIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYG 136
G + G Y P + S++R++ + +DI L+ WP + ++G
Sbjct: 115 GTESLNEPVPG-YSFSPKDVSSLRTMLCTTSQ--------FKGVDILLTSPWPKYVGNFG 165
Query: 137 NCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSA 177
N E+ GS + L LKP Y F+A
Sbjct: 166 NS----------SGEVDTKKCGSALVSSLATGLKPRYHFAA 196
>sp|Q8CI33|C19L1_MOUSE CWF19-like protein 1 OS=Mus musculus GN=Cwf19l1 PE=2 SV=2
Length = 537
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 38/213 (17%)
Query: 18 KYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGV-VKFGNIRIGGLS 76
+Y +G + API T +G N+E + ++ G A NI +LG GV ++I LS
Sbjct: 55 EYKTGNKKAPIQTYVLGANNEETANYFQGADGCELAENITYLGRKGVFTGSSGLQIVYLS 114
Query: 77 GIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYG 136
G + H P + S++R++ + Q + +DI L+ WP + +G
Sbjct: 115 GTESLDEPVPAH-SFSPKDVSSLRTM-------LCSASQF-KGVDILLTSPWPKYVGSFG 165
Query: 137 NCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSA-----------HLHCKFAA 185
N E+ GS + L LKP Y F+A H
Sbjct: 166 NS----------SGEVDTKNCGSALISSLAVSLKPRYHFAALEKSYYERLPYRNHVVLQE 215
Query: 186 VVQHGEDSPVTKFLALDKCL--PRRKFLQVFEI 216
QH T+F+AL ++K+L F I
Sbjct: 216 SAQHA-----TRFIALANVGNPEKKKYLYAFSI 243
>sp|Q69YN2|C19L1_HUMAN CWF19-like protein 1 OS=Homo sapiens GN=CWF19L1 PE=1 SV=2
Length = 538
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 20/161 (12%)
Query: 18 KYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGV-VKFGNIRIGGLS 76
+Y +G + API T +G N++ + ++ G A NI +LG G+ ++I LS
Sbjct: 55 EYKTGIKKAPIQTYVLGANNQETVKYFQDADGCELAENITYLGRKGIFTGSSGLQIVYLS 114
Query: 77 GIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYG 136
G + G Y P + S++R + + +DI L+ WP + ++G
Sbjct: 115 GTESLNEPVPG-YSFSPKDVSSLRMMLCTTSQ--------FKGVDILLTSPWPKCVGNFG 165
Query: 137 NCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSA 177
N E+ GS + L LKP Y F+A
Sbjct: 166 NS----------SGEVDTKKCGSALVSSLATGLKPRYHFAA 196
>sp|Q84WU9|C3H64_ARATH Zinc finger CCCH domain-containing protein 64 OS=Arabidopsis
thaliana GN=At5g56900 PE=2 SV=1
Length = 596
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 41/205 (20%)
Query: 13 MKSFWKYYSGQEVAPIPTIFIGG------------NHEASNYLWELYYGGWAAPNIYFLG 60
+ F Y G+ PIPT F G + +A N +++ G N+++L
Sbjct: 49 LDEFLDYVEGRAQVPIPTYFTGDYGVVAPKILSTTSKKAENQGFKMD-GLEVCHNLFWLR 107
Query: 61 FAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQI-EEP 119
+G + + LSG + + G Y + DV L + EEP
Sbjct: 108 GSGKFSLHGLSVAYLSG-RQSSESQFGKYSQD----------------DVDALRALAEEP 150
Query: 120 --IDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSA 177
+D+FL+++WP G+T+ ++ I D + ++L+ ++KP Y +
Sbjct: 151 GGVDLFLTNEWPAGVTNRAAVSDI-------PVGISDSSCSDSTVSELVMEVKPRYHIAG 203
Query: 178 HLHCKFA-AVVQHGEDSPVTKFLAL 201
+ +A + E + VT+F+ L
Sbjct: 204 SMGVFYAREPYLNAESTHVTRFIGL 228
>sp|Q10414|MU161_SCHPO CWF19-like protein mug161 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=mug161 PE=1 SV=1
Length = 561
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 25/154 (16%)
Query: 26 APIPTIF-IGGNHEASNYLWEL-YYGGWAAPNIYFLGFAGVVK-FGNIRIGGLSGIYNAR 82
PIP F +G + + + YG APN++ +G G +K F I L G YN
Sbjct: 68 VPIPVYFGVGTAGLPESIISHMAMYGPEVAPNLFCMGICGFMKTFYKFTIAQLGGSYNEE 127
Query: 83 HYRLGHYERP-PYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKEL 141
Y Y+ P + +S +H DV KL + DI S +WP +++
Sbjct: 128 KY----YQPPEKFEQSLNEKCFH--RSDVQKL---SKRCDILFSSEWP---------EDV 169
Query: 142 VRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWF 175
+ E+++ G + P A L P Y+F
Sbjct: 170 QENSTLPERKLPKGCM---PLAALAANCMPQYFF 200
>sp|Q5UP07|YL755_MIMIV Uncharacterized protein L755 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L755 PE=3 SV=1
Length = 130
Score = 35.0 bits (79), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 189 HGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAI---TRTFNSVFPLT 245
H +D K DKC+ R+ + F I+ Y D+EW+ +R F+ VF
Sbjct: 16 HSDDILALKMKKFDKCVNGRRLIDDFNIKKPNFIYAAFKDDEWIKTDGRSRKFDKVFVKV 75
Query: 246 SQSANFGGVQHDMNDCRQ 263
S N+ +DC +
Sbjct: 76 SWFENYIQENDSDDDCSE 93
>sp|Q21XR4|ARLY_RHOFD Argininosuccinate lyase OS=Rhodoferax ferrireducens (strain DSM
15236 / ATCC BAA-621 / T118) GN=argH PE=3 SV=1
Length = 483
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 5/138 (3%)
Query: 142 VRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHL-HCKFAAVVQHGEDSPVTKFLA 200
+ H Q+ +K L SEP + L+++ S +F L A + H + K ++
Sbjct: 1 MSHNQFDKKSQAWSALFSEPMSDLVKRYTASVFFDKRLWQADIAGSLAHADMLAAQKIIS 60
Query: 201 LDKCLPRRKFLQVF--EIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHD- 257
+ + + EIESG ++++ ++ L I + L + + G ++D
Sbjct: 61 SEDHNAIQSGMATISAEIESGAFDWKLELEDVHLNIEARLTQLIGLAGKRLHTGRSRNDQ 120
Query: 258 -MNDCRQWVRSRLQERGA 274
D R W+R + GA
Sbjct: 121 VATDVRLWLRGEIDLIGA 138
>sp|A6H730|PPAP_BOVIN Prostatic acid phosphatase OS=Bos taurus GN=ACPP PE=2 SV=1
Length = 387
Score = 31.6 bits (70), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 73 GGLSGIYNARHYRLGHYERPPY----NESTIRSVYHVREYDVHKLM 114
G L+ + A+HY LG Y R Y NES R HVR D+ + +
Sbjct: 70 GQLTQLGMAQHYELGQYIRKRYENFLNESYKREQVHVRSTDIDRTL 115
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147,894,975
Number of Sequences: 539616
Number of extensions: 6470689
Number of successful extensions: 13850
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 13787
Number of HSP's gapped (non-prelim): 33
length of query: 360
length of database: 191,569,459
effective HSP length: 119
effective length of query: 241
effective length of database: 127,355,155
effective search space: 30692592355
effective search space used: 30692592355
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)