Query 018136
Match_columns 360
No_of_seqs 235 out of 630
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 10:30:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018136.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018136hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rl5_A Metallophosphoesterase 99.3 3.4E-11 1.2E-15 116.2 13.5 144 28-206 111-277 (296)
2 2yvt_A Hypothetical protein AQ 98.9 2.3E-08 7.9E-13 91.1 14.5 161 25-217 87-250 (260)
3 1uf3_A Hypothetical protein TT 98.8 4.1E-08 1.4E-12 86.9 13.6 153 25-217 61-218 (228)
4 3d03_A Phosphohydrolase; glyce 97.8 8.9E-05 3.1E-09 67.3 10.6 130 25-185 69-202 (274)
5 3ib7_A ICC protein; metallopho 97.7 0.0007 2.4E-08 63.1 14.4 128 26-185 99-226 (330)
6 2xmo_A LMO2642 protein; phosph 96.7 0.064 2.2E-06 52.6 17.0 53 120-186 237-289 (443)
7 2nxf_A Putative dimetal phosph 95.3 0.033 1.1E-06 50.9 7.0 65 120-205 222-287 (322)
8 3tho_B Exonuclease, putative; 95.3 0.012 4E-07 57.6 4.1 51 28-79 79-135 (379)
9 1ute_A Protein (II purple acid 95.1 0.049 1.7E-06 49.6 7.6 49 117-182 177-225 (313)
10 3av0_A DNA double-strand break 94.8 0.024 8.1E-07 55.3 4.7 63 16-78 84-148 (386)
11 2q8u_A Exonuclease, putative; 92.4 0.099 3.4E-06 49.6 4.3 47 28-77 97-151 (336)
12 3qfk_A Uncharacterized protein 91.5 0.52 1.8E-05 47.9 8.7 135 31-186 104-255 (527)
13 1hp1_A 5'-nucleotidase; metall 90.3 1 3.5E-05 45.4 9.5 50 30-79 85-147 (516)
14 1xzw_A Purple acid phosphatase 89.8 0.42 1.4E-05 46.8 6.0 23 160-182 304-326 (426)
15 2qfp_A Purple acid phosphatase 89.5 0.69 2.4E-05 45.1 7.3 21 161-181 298-318 (424)
16 3ive_A Nucleotidase; structura 89.3 3.2 0.00011 41.9 12.2 48 31-78 88-149 (509)
17 3ztv_A NAD nucleotidase, NADN; 88.3 6.5 0.00022 40.4 13.9 47 31-77 97-158 (579)
18 3ck2_A Conserved uncharacteriz 87.2 1.5 5.2E-05 37.3 7.2 59 118-205 76-134 (176)
19 3tgh_A Glideosome-associated p 86.9 0.62 2.1E-05 45.1 5.0 63 118-203 190-252 (342)
20 4h1s_A 5'-nucleotidase; hydrol 86.2 2.2 7.4E-05 43.2 8.8 50 30-79 86-153 (530)
21 4h2g_A 5'-nucleotidase; dimer, 85.0 3.5 0.00012 42.0 9.7 48 31-78 109-174 (546)
22 2wdc_A SOXB, sulfur oxidation 83.8 3.3 0.00011 42.6 9.0 51 26-78 155-218 (562)
23 1nnw_A Hypothetical protein; s 83.7 3.6 0.00012 36.6 8.2 64 119-205 131-196 (252)
24 1z2w_A Vacuolar protein sortin 81.8 3.6 0.00012 35.5 7.2 59 118-205 88-146 (192)
25 2z1a_A 5'-nucleotidase; metal- 78.3 3.9 0.00013 41.7 7.2 49 30-78 109-172 (552)
26 1xm7_A Hypothetical protein AQ 76.8 3.3 0.00011 35.7 5.3 50 119-186 106-155 (195)
27 2a22_A Vacuolar protein sortin 76.3 7.2 0.00025 34.4 7.5 59 118-205 112-170 (215)
28 1s3l_A Hypothetical protein MJ 73.9 5.8 0.0002 34.5 6.2 37 164-206 130-167 (190)
29 3rqz_A Metallophosphoesterase; 67.3 4.6 0.00016 36.2 4.1 91 121-230 112-223 (246)
30 1ii7_A MRE11 nuclease; RAD50, 61.3 2.2 7.4E-05 40.3 0.7 26 15-40 63-88 (333)
31 3t1i_A Double-strand break rep 60.8 9.1 0.00031 38.2 5.2 23 19-41 131-153 (431)
32 3e0j_A DNA polymerase subunit 49.5 7.9 0.00027 39.4 2.6 66 12-78 282-354 (476)
33 1z2w_A Vacuolar protein sortin 48.4 5.8 0.0002 34.1 1.2 37 26-78 62-98 (192)
34 3qfm_A SAPH, putative uncharac 46.7 27 0.00094 31.9 5.7 94 118-232 128-236 (270)
35 4fbk_A DNA repair and telomere 45.6 26 0.00088 35.5 5.6 18 24-41 180-197 (472)
36 3jyf_A 2',3'-cyclic nucleotide 44.3 18 0.00062 34.6 4.2 48 31-78 96-165 (339)
37 2kkn_A Uncharacterized protein 44.1 21 0.00073 30.5 4.2 38 27-77 73-110 (178)
38 4fbw_A DNA repair protein RAD3 43.2 19 0.00066 35.7 4.2 20 22-41 115-134 (417)
39 3gve_A YFKN protein; alpha-bet 42.5 14 0.00047 35.5 3.0 48 31-78 103-171 (341)
40 3c9f_A 5'-nucleotidase; 2',3'- 35.0 24 0.00082 36.2 3.6 53 26-79 94-167 (557)
41 3zyw_A Glutaredoxin-3; metal b 21.1 25 0.00087 27.8 0.6 30 21-52 67-97 (111)
No 1
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.27 E-value=3.4e-11 Score=116.18 Aligned_cols=144 Identities=20% Similarity=0.262 Sum_probs=94.4
Q ss_pred ccEEEEcCCCCCc---hhHHHHh-----------------cCC--cccCcEEEeCCCcEEEECCeEEEEEcCccCCcccc
Q 018136 28 IPTIFIGGNHEAS---NYLWELY-----------------YGG--WAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYR 85 (360)
Q Consensus 28 vpTyFIgGNHE~s---~~l~el~-----------------~GG--~vapNIyyLG~~Gvv~~~GLRIagLSGi~~~~~y~ 85 (360)
.++|+|.||||.. ..+..+. .+. .+..|++||... +++++|+||.|..+.-..
T Consensus 111 ~~v~~V~GNHD~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~-~~~i~Gl~i~Gsp~tP~~---- 185 (296)
T 3rl5_A 111 EYKIVIAGNHELTFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDS-EVTVKGFRIYGAPWTPWF---- 185 (296)
T ss_dssp SEEEECCCTTCGGGCHHHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSE-EEEETTEEEEEECCBCC-----
T ss_pred CeEEEEcCCcccccchhhhhhhhcccccccccccccccchhhhHhhhcCCeEEecCC-cEEECCEEEEEecCCCCC----
Confidence 3589999999974 2222220 011 234688999874 568999999996654211
Q ss_pred CCCCCCCCCChhhhhhhhhhchHHHHHHhcccCCccEEEeCCCCCCccccCchhhHhhhcchhhhhccCCCCCcHHHHHH
Q 018136 86 LGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQL 165 (360)
Q Consensus 86 ~~~~e~~p~~~~~~rs~yhvr~~dv~kL~~~~~~VDILLSHdWP~gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~L 165 (360)
..+.|+.++... -..++.++..++||||||..|.++..... ......|+..+.+.
T Consensus 186 ----~~~~f~~~~~~~-------~~~~~~~ip~~~dILvTH~PP~g~~D~~~--------------~~~~~~G~~~L~~~ 240 (296)
T 3rl5_A 186 ----NGWGFNLPRGQS-------LLDKWNLIPEGTDILMTHGPPLGFRDWVP--------------KELQRVGCVELLNT 240 (296)
T ss_dssp -----CCTTBCCTTHH-------HHHHHTTSCTTCSEEEESSCBTTSSCEEG--------------GGTEECSBHHHHHH
T ss_pred ----CCcCCCcchHHH-------HHHHHhhCCCCCeEEEECCCccccccccc--------------cccCcCChHHHHHH
Confidence 112232222111 12234456678999999999999843210 01246899999998
Q ss_pred H-HHhCCCEEEeeccCccccceeccCCCCCeeEEEEeccCCC
Q 018136 166 L-EKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLP 206 (360)
Q Consensus 166 l-~~LkPRYhFsgHlH~~f~a~~~~~~~~~~TRFlaLdk~~~ 206 (360)
+ ++.+|++|++||.|..+..... ..|.|++-+.|..
T Consensus 241 i~~~~~p~l~v~GH~H~~~~~~~~-----g~t~vvNpGs~~~ 277 (296)
T 3rl5_A 241 VQRRVRPKLHVFGGIHEGYGTMTD-----GYTTYINASTCTV 277 (296)
T ss_dssp HHHTTCCSEEEECSCGGGCEEEEC-----SSCEEEECBCSCT
T ss_pred HHHhcCCCEEEECCccCCCceEEE-----CCEEEEECCcCCc
Confidence 8 6999999999999987754322 2599999999984
No 2
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=98.90 E-value=2.3e-08 Score=91.11 Aligned_cols=161 Identities=15% Similarity=0.110 Sum_probs=93.5
Q ss_pred CCCccEEEEcCCCCCchhH--HHHhcCCcccCcEEEeCCCcEEEECCeEEEEEcCccCCccccCCCCCCCCCChhhhhhh
Q 018136 25 VAPIPTIFIGGNHEASNYL--WELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSV 102 (360)
Q Consensus 25 kaPvpTyFIgGNHE~s~~l--~el~~GG~vapNIyyLG~~Gvv~~~GLRIagLSGi~~~~~y~~~~~e~~p~~~~~~rs~ 102 (360)
+.++|+|+|.||||..... .+......+.+|+.++.....++++|++|+|+++...... ++...+...
T Consensus 87 ~~~~pv~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~~----------~~~~~~~~~ 156 (260)
T 2yvt_A 87 ELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHE----------FEEDFVLKY 156 (260)
T ss_dssp TTCSEEEEECCTTSCCHHHHHHHHHHTTTTCTTEEECSSEEEEETTTEEEEEECSEEESSC----------CBSSSSCEE
T ss_pred hcCCcEEEEcCCCCchhhhhHHHHhhhccCCcceEEecCcceEEECCEEEEecCCCcCCCC----------cCHHHHhhc
Confidence 4578999999999987533 2322222245788888653327789999999997643111 111111100
Q ss_pred h-hhchHHHHHHhcccCCccEEEeCCCCCCccccCchhhHhhhcchhhhhccCCCCCcHHHHHHHHHhCCCEEEeeccCc
Q 018136 103 Y-HVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHC 181 (360)
Q Consensus 103 y-hvr~~dv~kL~~~~~~VDILLSHdWP~gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~Ll~~LkPRYhFsgHlH~ 181 (360)
. -..+..+..+.......+|++||.+|.+... +.. + ......|+..+.+++...+|+++++||.|
T Consensus 157 ~~~~~~~~l~~l~~~~~~~~Il~~H~pp~~~~~--d~~------~-----~~~~~~~~~~l~~~~~~~~~~~vl~GH~H- 222 (260)
T 2yvt_A 157 PRWYVEYILKFVNELKPRRLVTIFYTPPIGEFV--DRT------P-----EDPKHHGSAVVNTIIKSLNPEVAIVGHVG- 222 (260)
T ss_dssp EHHHHHHHGGGGGGSCCCEEEEEESSCCSCSST--TCB------T-----TBSCCCSCHHHHHHHHHHCCSEEEECSSC-
T ss_pred chhhHHHHHHHHHhcCCCCEEEEECCCcccccc--ccC------c-----ccccccCcHHHHHHHHHhCCCEEEECCcc-
Confidence 0 0000011112222345789999999976411 100 0 01235689999999999999999999999
Q ss_pred cccceeccCCCCCeeEEEEeccCCCCCCeeEEeecc
Q 018136 182 KFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIE 217 (360)
Q Consensus 182 ~f~a~~~~~~~~~~TRFlaLdk~~~~rk~l~a~~i~ 217 (360)
.. .... ..|.+++-+.+..+ ..-++++.
T Consensus 223 ~~--~~~~----~~~~~in~Gs~~~g--~~~ii~~~ 250 (260)
T 2yvt_A 223 KG--HELV----GNTIVVNPGEFEEG--RYAFLDLT 250 (260)
T ss_dssp CE--EEEE----TTEEEEECCBGGGT--EEEEEETT
T ss_pred CC--cEEe----CCEEEEeCCCCCCC--ceEEEEEc
Confidence 22 2211 13778887766543 44455553
No 3
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=98.84 E-value=4.1e-08 Score=86.95 Aligned_cols=153 Identities=18% Similarity=0.211 Sum_probs=91.8
Q ss_pred CCCccEEEEcCCCCCchh--HHHHhcCCcccCcEEEeCCCcEEEEC-CeEEEEEcCccCCccccCCCCCCCCCChhhhhh
Q 018136 25 VAPIPTIFIGGNHEASNY--LWELYYGGWAAPNIYFLGFAGVVKFG-NIRIGGLSGIYNARHYRLGHYERPPYNESTIRS 101 (360)
Q Consensus 25 kaPvpTyFIgGNHE~s~~--l~el~~GG~vapNIyyLG~~Gvv~~~-GLRIagLSGi~~~~~y~~~~~e~~p~~~~~~rs 101 (360)
+.++|+|+|.||||.... +.+......+.|+++.|.. ..+.++ |++|+|++|..... + .++.+++..
T Consensus 61 ~~~~pv~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~i~g~~~~~~~~-~--------~~~~~~~~~ 130 (228)
T 1uf3_A 61 EAHLPTAYVPGPQDAPIWEYLREAANVELVHPEMRNVHE-TFTFWRGPYLVAGVGGEIADE-G--------EPEEHEALR 130 (228)
T ss_dssp GGCSCEEEECCTTSCSHHHHHHHHHHHHHHCTTEEECBT-SEEEETTTEEEEEECSEEESS-S--------CCBSSSSCE
T ss_pred hcCCcEEEECCCCCchhHHHHHhhhhhhccCcceEEccc-ceEeeCCCcEEecCCCCcCCC-C--------ccChhhccc
Confidence 457899999999998643 2221111233567777754 456777 99999999764211 1 111111100
Q ss_pred hhh--hchHHHHHHhcccCCccEEEeCCCCCCccccCchhhHhhhcchhhhhccCCCCCcHHHHHHHHHhCCCEEEeecc
Q 018136 102 VYH--VREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHL 179 (360)
Q Consensus 102 ~yh--vr~~dv~kL~~~~~~VDILLSHdWP~gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~Ll~~LkPRYhFsgHl 179 (360)
|. .++.....|.++....+|++||.+|.+. . ....|++.+.++++..+|.++++||.
T Consensus 131 -~~~~~~~~~~~~l~~~~~~~~il~~H~p~~~~---~-----------------~~~~~~~~~~~~~~~~~~~~~~~GH~ 189 (228)
T 1uf3_A 131 -YPAWVAEYRLKALWELKDYPKIFLFHTMPYHK---G-----------------LNEQGSHEVAHLIKTHNPLLVLVAGK 189 (228)
T ss_dssp -EEHHHHHHHHGGGGGSCSCCEEEEESSCBCBT---T-----------------TBTTSBHHHHHHHHHHCCSEEEECCS
T ss_pred -chhhhHHHHHHHHHhCCCCCeEEEEccCcccC---C-----------------ccccCHHHHHHHHHHhCCCEEEEccc
Confidence 00 0011112233333468999999999764 1 12358888999999999999999999
Q ss_pred CccccceeccCCCCCeeEEEEeccCCCCCCeeEEeecc
Q 018136 180 HCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIE 217 (360)
Q Consensus 180 H~~f~a~~~~~~~~~~TRFlaLdk~~~~rk~l~a~~i~ 217 (360)
| ... ... ..|++++-+.+. +...-++++.
T Consensus 190 H-~~~--~~~----~~~~~in~Gs~~--~~~~~i~~~~ 218 (228)
T 1uf3_A 190 G-QKH--EML----GASWVVVPGDLS--EGEYSLLDLR 218 (228)
T ss_dssp S-CEE--EEE----TTEEEEECCBGG--GTEEEEEETT
T ss_pred c-cCc--ccc----CCceEEEecccC--CCceEEEEec
Confidence 9 322 111 247888877765 3455566664
No 4
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=97.83 E-value=8.9e-05 Score=67.25 Aligned_cols=130 Identities=15% Similarity=0.091 Sum_probs=73.1
Q ss_pred CCCccEEEEcCCCCCchhHHHHhcCCcc--cCcEEEeCC-CcEEEECCeEEEEEcCccCCccccCCCCCCCCCChhhhhh
Q 018136 25 VAPIPTIFIGGNHEASNYLWELYYGGWA--APNIYFLGF-AGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRS 101 (360)
Q Consensus 25 kaPvpTyFIgGNHE~s~~l~el~~GG~v--apNIyyLG~-~Gvv~~~GLRIagLSGi~~~~~y~~~~~e~~p~~~~~~rs 101 (360)
++.+|+++|.||||....+.+.....|+ ..|. |. .-++..+|++|.+|........ ...++...+.-
T Consensus 69 ~l~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~ld~~~~~~~-------~~~~~~~~~~w 138 (274)
T 3d03_A 69 SLNYPLYLIPGNHDDKALFLEYLQPLCPQLGSDA---NNMRCAVDDFATRLLFIDSSRAGTS-------KGWLTDETISW 138 (274)
T ss_dssp TCSSCEEEECCTTSCHHHHHHHHGGGSGGGCSCG---GGCCEEECSSSSEEEECCCCCTTCS-------SBCCCHHHHHH
T ss_pred hcCCCEEEECCCCCCHHHHHHHhhhhhcCcccCC---CceEEEEEeCCEEEEEEeCCCCCCC-------CCeeCHHHHHH
Confidence 4578999999999987554332211121 1110 10 1133568999999986543211 01122222221
Q ss_pred hhhhchHHHHHHhcccCCccEEEeCCCCCCccccCchhhHhhhcchhhhhccCCCCCcHHHHHHHHHh-CCCEEEeeccC
Q 018136 102 VYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL-KPSYWFSAHLH 180 (360)
Q Consensus 102 ~yhvr~~dv~kL~~~~~~VDILLSHdWP~gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~Ll~~L-kPRYhFsgHlH 180 (360)
+ + ..|.+......|+++|..|......... .....++..+.+++++. ++.++|+||.|
T Consensus 139 l----~---~~l~~~~~~~~iv~~H~p~~~~~~~~~~--------------~~~~~~~~~l~~~l~~~~~v~~vl~GH~H 197 (274)
T 3d03_A 139 L----E---AQLFEGGDKPATIFMHHPPLPLGNAQMD--------------PIACENGHRLLALVERFPSLTRIFCGHNH 197 (274)
T ss_dssp H----H---HHHHHHTTSCEEEEESSCSSCCSCTTTG--------------GGSBTTTHHHHHHHHHCTTEEEEEECSSS
T ss_pred H----H---HHHHhCCCCCEEEEECCCCcccCCcccC--------------cccCcCHHHHHHHHHhCCCceEEEeCCCC
Confidence 1 1 1122223457899999998765321100 01123667888899888 79999999999
Q ss_pred ccccc
Q 018136 181 CKFAA 185 (360)
Q Consensus 181 ~~f~a 185 (360)
..+..
T Consensus 198 ~~~~~ 202 (274)
T 3d03_A 198 SLTMT 202 (274)
T ss_dssp SCEEE
T ss_pred Cchhh
Confidence 87543
No 5
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=97.68 E-value=0.0007 Score=63.10 Aligned_cols=128 Identities=15% Similarity=0.095 Sum_probs=74.5
Q ss_pred CCccEEEEcCCCCCchhHHHHhcCCcccCcEEEeCCCcEEEECCeEEEEEcCccCCccccCCCCCCCCCChhhhhhhhhh
Q 018136 26 APIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHV 105 (360)
Q Consensus 26 aPvpTyFIgGNHE~s~~l~el~~GG~vapNIyyLG~~Gvv~~~GLRIagLSGi~~~~~y~~~~~e~~p~~~~~~rs~yhv 105 (360)
..+|+|+|.||||....+.....+.....+ ...-++.++|++|.+|.+...... . .-.....+.-+
T Consensus 99 ~~~pv~~v~GNHD~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~lds~~~~~~--~-----~~~~~~q~~wl--- 164 (330)
T 3ib7_A 99 LGAELVWVMGNHDDRAELRKFLLDEAPSMA----PLDRVCMIDGLRIIVLDTSVPGHH--H-----GEIRASQLGWL--- 164 (330)
T ss_dssp HTCEEEECCCTTSCHHHHHHHHHCCCCCCS----CCCEEEEETTEEEEECCCCCTTCC--S-----BCCCHHHHHHH---
T ss_pred cCCCEEEeCCCCCCHHHHHHHhcccccccC----CcceEEEeCCEEEEEecCCCCCCC--C-----CccCHHHHHHH---
Confidence 367899999999986555443222111101 112356789999999987653211 0 01122222111
Q ss_pred chHHHHHHhcccCCccEEEeCCCCCCccccCchhhHhhhcchhhhhccCCCCCcHHHHHHHHHhCCCEEEeeccCccccc
Q 018136 106 REYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAA 185 (360)
Q Consensus 106 r~~dv~kL~~~~~~VDILLSHdWP~gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~Ll~~LkPRYhFsgHlH~~f~a 185 (360)
...|........|+++|-.|........ ......+...+.++++..++.++|+||.|.....
T Consensus 165 ----~~~l~~~~~~~~iv~~Hh~p~~~~~~~~--------------~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~ 226 (330)
T 3ib7_A 165 ----AEELATPAPDGTILALHHPPIPSVLDMA--------------VTVELRDQAALGRVLRGTDVRAILAGHLHYSTNA 226 (330)
T ss_dssp ----HHHTTSCCTTCEEEECSSCSSCCSSGGG--------------GGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEE
T ss_pred ----HHHHHhcccCCeEEEEECCCCCCCcccc--------------ccccccCHHHHHHHHhccCceEEEECCCCCcccc
Confidence 1122222334479999999987522110 0112346778888999889999999999987643
No 6
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=96.67 E-value=0.064 Score=52.58 Aligned_cols=53 Identities=13% Similarity=-0.035 Sum_probs=36.9
Q ss_pred ccEEEeCCCCCCccccCchhhHhhhcchhhhhccCCCCCcHHHHHHHHHhCCCEEEeeccCccccce
Q 018136 120 IDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAV 186 (360)
Q Consensus 120 VDILLSHdWP~gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~Ll~~LkPRYhFsgHlH~~f~a~ 186 (360)
.-|+++|-.|........ ......++..+.+++++.+++.+|+||.|......
T Consensus 237 ~~Iv~~H~p~~~~~~~~~--------------~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~~ 289 (443)
T 2xmo_A 237 KLIPVLHHNLTDHNDVIQ--------------KGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIRS 289 (443)
T ss_dssp EEEEECSSBSSCSSCC----------------CCSBCTTHHHHHHHHHHTTCCEEEECSSCSCEEEE
T ss_pred eEEEEECCCCcccccccc--------------cccccccHHHHHHHHHHcCCeEEEECCcccCchhh
Confidence 459999999876532110 00112367788899999999999999999876544
No 7
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=95.27 E-value=0.033 Score=50.86 Aligned_cols=65 Identities=11% Similarity=0.001 Sum_probs=40.8
Q ss_pred ccEEEeCCCCCCccccCchhhHhhhcchhhhhccCCCCCcHHHHHHHHHh-CCCEEEeeccCccccceeccCCCCCeeEE
Q 018136 120 IDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL-KPSYWFSAHLHCKFAAVVQHGEDSPVTKF 198 (360)
Q Consensus 120 VDILLSHdWP~gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~Ll~~L-kPRYhFsgHlH~~f~a~~~~~~~~~~TRF 198 (360)
--|+++|-.|..... +. .....+...+.+++... +.+.+|+||.|........ ..+++
T Consensus 222 ~~iv~~H~p~~~~~~--~~--------------~~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~~-----~g~~~ 280 (322)
T 2nxf_A 222 RVLIFSHLPVHPCAA--DP--------------ICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDS-----SGAQH 280 (322)
T ss_dssp EEEEEESSCCCTTSS--CG--------------GGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEECT-----TSCEE
T ss_pred cEEEEEccCCCCCCC--Cc--------------cccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceecc-----CCceE
Confidence 359999998876432 10 01123566777888776 6788999999976543311 13677
Q ss_pred EEeccCC
Q 018136 199 LALDKCL 205 (360)
Q Consensus 199 laLdk~~ 205 (360)
++.+...
T Consensus 281 i~~~~~~ 287 (322)
T 2nxf_A 281 ITLEGVI 287 (322)
T ss_dssp EECCCGG
T ss_pred EEecchh
Confidence 7666553
No 8
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=95.26 E-value=0.012 Score=57.63 Aligned_cols=51 Identities=18% Similarity=0.187 Sum_probs=31.3
Q ss_pred ccEEEEcCCCCCchh-HHHHhcCCcccCcEEEeCCCcEEEE---CC--eEEEEEcCcc
Q 018136 28 IPTIFIGGNHEASNY-LWELYYGGWAAPNIYFLGFAGVVKF---GN--IRIGGLSGIY 79 (360)
Q Consensus 28 vpTyFIgGNHE~s~~-l~el~~GG~vapNIyyLG~~Gvv~~---~G--LRIagLSGi~ 79 (360)
+|+|+|.|||+.... +.... ...+.+|+.++.....+.+ .| +.|.++....
T Consensus 79 ~~v~~i~GNHD~~~~~~~~~~-~~~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~ 135 (379)
T 3tho_B 79 APVVVLPGNQDWKGLKLFGNF-VTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPD 135 (379)
T ss_dssp SCEEECCCTTSCTTHHHHHHH-HHTTCSSEEECCSSCCEEEECTTCCEEEEEEECCCC
T ss_pred CCEEEEcCCCccccCcccccc-ccccCCcceeecccceEEEEcCCCCEEEEEECCCCC
Confidence 899999999996642 22211 1124567777765444443 35 7888887543
No 9
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=95.09 E-value=0.049 Score=49.60 Aligned_cols=49 Identities=18% Similarity=0.117 Sum_probs=33.8
Q ss_pred cCCccEEEeCCCCCCccccCchhhHhhhcchhhhhccCCCCCcHHHHHHHHHhCCCEEEeeccCcc
Q 018136 117 EEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCK 182 (360)
Q Consensus 117 ~~~VDILLSHdWP~gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~Ll~~LkPRYhFsgHlH~~ 182 (360)
....-|+++|-.|......+.... ....+..+++..+...+|+||.|..
T Consensus 177 ~~~~~iv~~H~p~~~~~~~~~~~~-----------------~~~~l~~~l~~~~v~~~l~GH~H~~ 225 (313)
T 1ute_A 177 KEDYVLVAGHYPVWSIAEHGPTHC-----------------LVKQLLPLLTTHKVTAYLCGHDHNL 225 (313)
T ss_dssp CCSEEEEECSSCSSCCSSSCCCHH-----------------HHHHTHHHHHHTTCSEEEECSSSSE
T ss_pred CCCeEEEEECCCCccCCCCCCcHH-----------------HHHHHHHHHHHcCCcEEEECChhhh
Confidence 346789999999877644332110 0134667788889999999999953
No 10
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=94.76 E-value=0.024 Score=55.34 Aligned_cols=63 Identities=19% Similarity=0.092 Sum_probs=32.6
Q ss_pred HHHHHcCCCCCCccEEEEcCCCCCchhHHHHhcCCcccCcEEEeCCCcEEEE--CCeEEEEEcCc
Q 018136 16 FWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKF--GNIRIGGLSGI 78 (360)
Q Consensus 16 F~~Y~sG~~kaPvpTyFIgGNHE~s~~l~el~~GG~vapNIyyLG~~Gvv~~--~GLRIagLSGi 78 (360)
|.+.+......++|+|+|.|||+....+.....-..+..++..++...++.. .+++|.|++..
T Consensus 84 ~~~~l~~L~~~~~pv~~v~GNHD~~~~~~~~~~~~~l~~~v~~l~~~~v~~~~~~~v~i~gl~~~ 148 (386)
T 3av0_A 84 AMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKDYVKILDGKDVINVNGEEIFICGTYYH 148 (386)
T ss_dssp HHHHHHHHHHTTCEEEECCCGGGSCSSTTSCCGGGGGTTTCEECSEEEEEEETTEEEEEEEECCC
T ss_pred HHHHHHHHHhcCCcEEEEcCCCCCCccccccCHHHHHHHHeEEcCCCcEEEeCCCCEEEEeCCCC
Confidence 3444433334578999999999875432110000001122555654333322 56788888743
No 11
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=92.38 E-value=0.099 Score=49.57 Aligned_cols=47 Identities=21% Similarity=0.193 Sum_probs=25.0
Q ss_pred ccEEEEcCCCCCchhHHH---HhcCCcccCcEEEeCCCcEE---EE--CCeEEEEEcC
Q 018136 28 IPTIFIGGNHEASNYLWE---LYYGGWAAPNIYFLGFAGVV---KF--GNIRIGGLSG 77 (360)
Q Consensus 28 vpTyFIgGNHE~s~~l~e---l~~GG~vapNIyyLG~~Gvv---~~--~GLRIagLSG 77 (360)
+|+|+|.|||+... +.. +.. ...+|+++++....+ .+ ++++|.|++-
T Consensus 97 ~pv~~i~GNHD~~~-~~~~~~~l~--~~g~nv~v~~~~~~~~~~~~~~~~v~i~glp~ 151 (336)
T 2q8u_A 97 APVVVLPGNHDWKG-LKLFGNFVT--SISSDITFVMSFEPVDVEAKRGQKVRILPFPY 151 (336)
T ss_dssp SCEEECCC-------CHHHHHHHH--HHCSSEEECCSSSCEEEECTTSCEEEEEEECC
T ss_pred CCEEEECCCCCccc-cccHHHHHH--hcCCEEEEEecccccCceEEeCCCEEEEECCC
Confidence 79999999999765 221 111 001578888875542 22 4688888863
No 12
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=91.49 E-value=0.52 Score=47.85 Aligned_cols=135 Identities=16% Similarity=0.154 Sum_probs=67.5
Q ss_pred EEEcCCCCCc---hhHHHHh---cCCcccCcEEEeC-----C-CcEEEECCeEEEEEcCccCCc-cccCC-CCCCCCCCh
Q 018136 31 IFIGGNHEAS---NYLWELY---YGGWAAPNIYFLG-----F-AGVVKFGNIRIGGLSGIYNAR-HYRLG-HYERPPYNE 96 (360)
Q Consensus 31 yFIgGNHE~s---~~l~el~---~GG~vapNIyyLG-----~-~Gvv~~~GLRIagLSGi~~~~-~y~~~-~~e~~p~~~ 96 (360)
+++.||||-. ..+.++. .--+++-|++..| . .-+++++|+|||.+|-..... .+..+ ....+.|..
T Consensus 104 ~~t~GNHefd~G~~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~~~~~~~~~~~~g~~~~d 183 (527)
T 3qfk_A 104 FGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPEHIQSLTFHS 183 (527)
T ss_dssp EECCCGGGGTTCHHHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTTGGGTSCHHHHTTEEECC
T ss_pred EEeccccccccCHHHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCCcccccCccccCCcEEcC
Confidence 5668999943 2233322 2348899998642 2 345578999999887554321 11000 000111111
Q ss_pred hhhhhhhhhchHHHHHHhcccCCccEEEeCCCCCCccc-cCchhhHhhhcchhhhhccCCCCCcHHHHHHHHHh--CCCE
Q 018136 97 STIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITD-YGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL--KPSY 173 (360)
Q Consensus 97 ~~~rs~yhvr~~dv~kL~~~~~~VDILLSHdWP~gI~~-~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~Ll~~L--kPRY 173 (360)
.+..+ +..+.+|. ....+=|+|+| |+..-.. .+.. .....|.....+|++++ ..--
T Consensus 184 -~~~~~----~~~v~~l~-~~~D~iIvl~H-~G~~~d~~~~~~--------------~~~~~~e~~~~~la~~~~~giDl 242 (527)
T 3qfk_A 184 -AFEIL----QQYLPEMK-RHADIIVVCYH-GGFEKDLESGTP--------------TEVLTGENEGYAMLEAFSKDIDI 242 (527)
T ss_dssp -HHHHH----HHHHHHHH-HHCSEEEEEEE-CCCSBCTTTCCB--------------SSCCSSSCCHHHHHHHHGGGCSE
T ss_pred -HHHHH----HHHHHHHH-hCCCEEEEEeC-cCcccccccCcc--------------ccccccchHHHHHHHhcCCCCcE
Confidence 11111 22344444 12234478899 4432210 0000 00012333456777777 6789
Q ss_pred EEeeccCccccce
Q 018136 174 WFSAHLHCKFAAV 186 (360)
Q Consensus 174 hFsgHlH~~f~a~ 186 (360)
.++||.|..+...
T Consensus 243 IlgGHtH~~~~~~ 255 (527)
T 3qfk_A 243 FITGHQHRQIAER 255 (527)
T ss_dssp EECCSSCCEEEEE
T ss_pred EEECCCCcccceE
Confidence 9999999988643
No 13
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=90.26 E-value=1 Score=45.43 Aligned_cols=50 Identities=22% Similarity=0.118 Sum_probs=31.3
Q ss_pred EEEEcCCCCCch---hHHHHh---cCCcccCcEEEeC-------CCcEEEECCeEEEEEcCcc
Q 018136 30 TIFIGGNHEASN---YLWELY---YGGWAAPNIYFLG-------FAGVVKFGNIRIGGLSGIY 79 (360)
Q Consensus 30 TyFIgGNHE~s~---~l~el~---~GG~vapNIyyLG-------~~Gvv~~~GLRIagLSGi~ 79 (360)
.+++.||||-.. .|.+.. .--+++-|++.-. ..-+++++|+||+.+|-..
T Consensus 85 d~~~~GNHEfd~g~~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~ 147 (516)
T 1hp1_A 85 DAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTT 147 (516)
T ss_dssp CEEECCGGGGSSCHHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEEC
T ss_pred CEEeeccccccCCHHHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecc
Confidence 478889999642 233322 2236788987532 2235678999999987543
No 14
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=89.82 E-value=0.42 Score=46.81 Aligned_cols=23 Identities=22% Similarity=0.190 Sum_probs=19.1
Q ss_pred HHHHHHHHHhCCCEEEeeccCcc
Q 018136 160 EPAAQLLEKLKPSYWFSAHLHCK 182 (360)
Q Consensus 160 ~~i~~Ll~~LkPRYhFsgHlH~~ 182 (360)
..+..|+.+.+...+|+||.|..
T Consensus 304 ~~l~~ll~~~~VdlvlsGH~H~~ 326 (426)
T 1xzw_A 304 AIFEPYFVYYKVDIVFSGHVHSY 326 (426)
T ss_dssp HHHHHHHHHTTCSEEEECSSSSE
T ss_pred HHHHHHHHHhCCCEEEEcChhhh
Confidence 45667888889999999999964
No 15
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=89.51 E-value=0.69 Score=45.12 Aligned_cols=21 Identities=24% Similarity=0.328 Sum_probs=18.3
Q ss_pred HHHHHHHHhCCCEEEeeccCc
Q 018136 161 PAAQLLEKLKPSYWFSAHLHC 181 (360)
Q Consensus 161 ~i~~Ll~~LkPRYhFsgHlH~ 181 (360)
.+..|+.+.+...+|+||.|.
T Consensus 298 ~l~~ll~~~~VdlvlsGH~H~ 318 (424)
T 2qfp_A 298 KFEAWFVKYKVDVVFAGHVHA 318 (424)
T ss_dssp HHHHHHHHTTCSEEEECSSSS
T ss_pred HHHHHHHHhCCcEEEECChhh
Confidence 566788888999999999997
No 16
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=89.26 E-value=3.2 Score=41.89 Aligned_cols=48 Identities=17% Similarity=0.131 Sum_probs=30.6
Q ss_pred EEEcCCCCCc---hhHHHHhc---CCcccCcEEEeC--------CCcEEEECCeEEEEEcCc
Q 018136 31 IFIGGNHEAS---NYLWELYY---GGWAAPNIYFLG--------FAGVVKFGNIRIGGLSGI 78 (360)
Q Consensus 31 yFIgGNHE~s---~~l~el~~---GG~vapNIyyLG--------~~Gvv~~~GLRIagLSGi 78 (360)
+++.||||-. ..|.+... --+++-|++.-. ..-|++.+|+|||.+|-.
T Consensus 88 ~~tlGNHEfd~G~~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t 149 (509)
T 3ive_A 88 AVTIGNHEFDHGWDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLH 149 (509)
T ss_dssp EECCCGGGGTTCHHHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEE
T ss_pred EEeecccccccCHHHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecc
Confidence 5667999943 23433322 237899998632 123557899999988753
No 17
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=88.26 E-value=6.5 Score=40.38 Aligned_cols=47 Identities=19% Similarity=0.060 Sum_probs=30.1
Q ss_pred EEEcCCCCCchh---HHHHh---cCCcccCcEEEeCC---------CcEEEECCeEEEEEcC
Q 018136 31 IFIGGNHEASNY---LWELY---YGGWAAPNIYFLGF---------AGVVKFGNIRIGGLSG 77 (360)
Q Consensus 31 yFIgGNHE~s~~---l~el~---~GG~vapNIyyLG~---------~Gvv~~~GLRIagLSG 77 (360)
+++.||||-..- |.++. .--+++-|++.-.. .-|++++|+|||.+|=
T Consensus 97 ~~tlGNHEfd~G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~ 158 (579)
T 3ztv_A 97 YFTLGNHEFDAGNEGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGL 158 (579)
T ss_dssp EEECCSGGGTTHHHHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEE
T ss_pred eeeccccccccCHHHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEE
Confidence 467899995322 33332 22378889986421 2355789999998875
No 18
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=87.21 E-value=1.5 Score=37.32 Aligned_cols=59 Identities=15% Similarity=0.110 Sum_probs=44.0
Q ss_pred CCccEEEeCCCCCCccccCchhhHhhhcchhhhhccCCCCCcHHHHHHHHHhCCCEEEeeccCccccceeccCCCCCeeE
Q 018136 118 EPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTK 197 (360)
Q Consensus 118 ~~VDILLSHdWP~gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~Ll~~LkPRYhFsgHlH~~f~a~~~~~~~~~~TR 197 (360)
.+..|+++|-.|.++. .+...+.++++..++.++++||.|..+.... ..+.
T Consensus 76 ~~~~i~~~Hg~~~~~~-----------------------~~~~~l~~~~~~~~~d~vi~GHtH~~~~~~~------~~~~ 126 (176)
T 3ck2_A 76 GSTKIIQTHGHLFDIN-----------------------FNFQKLDYWAQEEEAAICLYGHLHVPSAWLE------GKIL 126 (176)
T ss_dssp TTEEEEEECSGGGTTT-----------------------TCSHHHHHHHHHTTCSEEECCSSCCEEEEEE------TTEE
T ss_pred CCeEEEEECCCccCCC-----------------------CCHHHHHHHHHhcCCCEEEECCcCCCCcEEE------CCEE
Confidence 4678999998775431 2556678888889999999999998765332 1378
Q ss_pred EEEeccCC
Q 018136 198 FLALDKCL 205 (360)
Q Consensus 198 FlaLdk~~ 205 (360)
+++-+.+.
T Consensus 127 ~inpGs~~ 134 (176)
T 3ck2_A 127 FLNPGSIS 134 (176)
T ss_dssp EEEECCSS
T ss_pred EEECCCCC
Confidence 88887765
No 19
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=86.91 E-value=0.62 Score=45.12 Aligned_cols=63 Identities=10% Similarity=-0.058 Sum_probs=40.7
Q ss_pred CCccEEEeCCCCCCccccCchhhHhhhcchhhhhccCCCCCcHHHHHHHHHhCCCEEEeeccCccccceeccCCCCCeeE
Q 018136 118 EPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTK 197 (360)
Q Consensus 118 ~~VDILLSHdWP~gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~Ll~~LkPRYhFsgHlH~~f~a~~~~~~~~~~TR 197 (360)
.+.=|+++|-.+.....+++...| ...+..|+.+.+-...|+||.|....-.. . .+.
T Consensus 190 ~~~~IV~~HhP~~~~~~~~~~~~l-----------------~~~l~~ll~~~~VdlvlsGH~H~~~~~~~-~-----g~~ 246 (342)
T 3tgh_A 190 ADFIIVVGDQPIYSSGYSRGSSYL-----------------AYYLLPLLKDAEVDLYISGHDNNMEVIED-N-----DMA 246 (342)
T ss_dssp CSEEEEECSSCSSCSSTTCCCHHH-----------------HHHTHHHHHHTTCCEEEECSSSSEEEEEE-T-----TEE
T ss_pred CCcEEEEECCCCCCCCCCCCcHHH-----------------HHHHHHHHHHcCCCEEEECCCcceeEEee-C-----CcE
Confidence 355689999988766444432211 24567788888999999999997643222 1 166
Q ss_pred EEEecc
Q 018136 198 FLALDK 203 (360)
Q Consensus 198 FlaLdk 203 (360)
+|..+.
T Consensus 247 ~iv~Ga 252 (342)
T 3tgh_A 247 HITCGS 252 (342)
T ss_dssp EEEECC
T ss_pred EEEeCc
Confidence 666554
No 20
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=86.19 E-value=2.2 Score=43.21 Aligned_cols=50 Identities=26% Similarity=0.139 Sum_probs=32.6
Q ss_pred EEEEcCCCCCc---hhHHH-Hh---cCCcccCcEEEeCC-----------CcEEEECCeEEEEEcCcc
Q 018136 30 TIFIGGNHEAS---NYLWE-LY---YGGWAAPNIYFLGF-----------AGVVKFGNIRIGGLSGIY 79 (360)
Q Consensus 30 TyFIgGNHE~s---~~l~e-l~---~GG~vapNIyyLG~-----------~Gvv~~~GLRIagLSGi~ 79 (360)
-..+.||||-. ..|.+ +. .--|||-||+.-+. .-|++++|+|||.+|=.-
T Consensus 86 Da~~lGNHEFd~G~~~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGltt 153 (530)
T 4h1s_A 86 DAMALGNHEFDNGVEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTS 153 (530)
T ss_dssp CEEECCGGGGTTTTHHHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEEEC
T ss_pred CEEEEchhhhccCHHHHHHHHHhhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeeccccc
Confidence 34678999954 22333 22 23489999987542 235678999999998553
No 21
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=85.02 E-value=3.5 Score=42.01 Aligned_cols=48 Identities=27% Similarity=0.149 Sum_probs=31.6
Q ss_pred EEEcCCCCCch---hHH-HHh---cCCcccCcEEEeC-----------CCcEEEECCeEEEEEcCc
Q 018136 31 IFIGGNHEASN---YLW-ELY---YGGWAAPNIYFLG-----------FAGVVKFGNIRIGGLSGI 78 (360)
Q Consensus 31 yFIgGNHE~s~---~l~-el~---~GG~vapNIyyLG-----------~~Gvv~~~GLRIagLSGi 78 (360)
+++.||||-.. .|. +.. .--+++-|++..+ ..-|++.+|+|||.+|=.
T Consensus 109 ~~~~GNHEfd~g~~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~~ 174 (546)
T 4h2g_A 109 AMALGNHEFDNGVEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYT 174 (546)
T ss_dssp EEECCGGGGTTHHHHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEEE
T ss_pred EEeccCcccccCHHHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEec
Confidence 67789999542 233 322 1237889998754 234557899999988743
No 22
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=83.77 E-value=3.3 Score=42.55 Aligned_cols=51 Identities=14% Similarity=0.092 Sum_probs=30.6
Q ss_pred CCccEEEEcCCCCCc---hhHHHHh---cCCcccCcEEEeC-------CCcEEEECCeEEEEEcCc
Q 018136 26 APIPTIFIGGNHEAS---NYLWELY---YGGWAAPNIYFLG-------FAGVVKFGNIRIGGLSGI 78 (360)
Q Consensus 26 aPvpTyFIgGNHE~s---~~l~el~---~GG~vapNIyyLG-------~~Gvv~~~GLRIagLSGi 78 (360)
+.+.. ++ ||||-. ..+.+.. .--+++-|++.-. ..-+++++|+|||.+|-.
T Consensus 155 lg~d~-~~-GNHEfd~G~~~l~~~l~~~~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~ 218 (562)
T 2wdc_A 155 VGVDH-MV-SHWEWTLGRERVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGAS 218 (562)
T ss_dssp HTCCE-EC-CSGGGGGCHHHHHHHHHHCCSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEEC
T ss_pred hCCcE-Ee-cchhcccCHHHHHHHHHhCCCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeec
Confidence 44554 57 999953 2233222 2236788887541 122557899999999754
No 23
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=83.70 E-value=3.6 Score=36.57 Aligned_cols=64 Identities=6% Similarity=-0.049 Sum_probs=43.3
Q ss_pred CccEEEeCCCCC-CccccCchhhHhhhcchhhhhccCCCCCcHHHHHHHHHh-CCCEEEeeccCccccceeccCCCCCee
Q 018136 119 PIDIFLSHDWPC-GITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL-KPSYWFSAHLHCKFAAVVQHGEDSPVT 196 (360)
Q Consensus 119 ~VDILLSHdWP~-gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~Ll~~L-kPRYhFsgHlH~~f~a~~~~~~~~~~T 196 (360)
+.+|+++|-.|. ....+. ....+...+.+++... +++++|+||.|..+..... .+
T Consensus 131 ~~~i~~~H~~p~~~~~~~~-----------------~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~~~------~~ 187 (252)
T 1nnw_A 131 GNEVFGVYGSPINPFDGEV-----------------LAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAMTR------YG 187 (252)
T ss_dssp TEEEEEESSCSSCTTTCCC-----------------CSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEEET------TE
T ss_pred CcEEEEEcCCCCCCccccc-----------------CCCCCHHHHHHHHhcCCCCCEEEECCccccceEecC------Ce
Confidence 358999998873 221110 0122446677888888 8999999999987654431 37
Q ss_pred EEEEeccCC
Q 018136 197 KFLALDKCL 205 (360)
Q Consensus 197 RFlaLdk~~ 205 (360)
.+++.+.++
T Consensus 188 ~~in~Gs~~ 196 (252)
T 1nnw_A 188 RVVCPGSVG 196 (252)
T ss_dssp EEEEECCSS
T ss_pred EEEECCCcc
Confidence 888888776
No 24
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=81.78 E-value=3.6 Score=35.53 Aligned_cols=59 Identities=15% Similarity=-0.032 Sum_probs=41.7
Q ss_pred CCccEEEeCCCCCCccccCchhhHhhhcchhhhhccCCCCCcHHHHHHHHHhCCCEEEeeccCccccceeccCCCCCeeE
Q 018136 118 EPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTK 197 (360)
Q Consensus 118 ~~VDILLSHdWP~gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~Ll~~LkPRYhFsgHlH~~f~a~~~~~~~~~~TR 197 (360)
.+..|+++|-.|.... .+...+.++++..++.++++||.|..+.... ..++
T Consensus 88 ~~~~i~l~Hg~~~~~~-----------------------~~~~~l~~~~~~~~~d~vi~GHtH~~~~~~~------~~~~ 138 (192)
T 1z2w_A 88 GQFKIGLIHGHQVIPW-----------------------GDMASLALLQRQFDVDILISGHTHKFEAFEH------ENKF 138 (192)
T ss_dssp TTEEEEEECSCCCCBT-----------------------TCHHHHHHHHHHHSSSEEECCSSCCCEEEEE------TTEE
T ss_pred CCEEEEEECCCcCCCC-----------------------CCHHHHHHHHHhcCCCEEEECCcCcCccEeE------CCEE
Confidence 3578999997775431 1345567788888999999999998764322 1377
Q ss_pred EEEeccCC
Q 018136 198 FLALDKCL 205 (360)
Q Consensus 198 FlaLdk~~ 205 (360)
+++-+.+.
T Consensus 139 ~inpGS~~ 146 (192)
T 1z2w_A 139 YINPGSAT 146 (192)
T ss_dssp EEECCCTT
T ss_pred EEECCccc
Confidence 88777664
No 25
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=78.30 E-value=3.9 Score=41.68 Aligned_cols=49 Identities=22% Similarity=0.119 Sum_probs=29.9
Q ss_pred EEEEcCCCCCc---hhHHHHhc---CCcccCcEEEeCC---------CcEEEECCeEEEEEcCc
Q 018136 30 TIFIGGNHEAS---NYLWELYY---GGWAAPNIYFLGF---------AGVVKFGNIRIGGLSGI 78 (360)
Q Consensus 30 TyFIgGNHE~s---~~l~el~~---GG~vapNIyyLG~---------~Gvv~~~GLRIagLSGi 78 (360)
.+++.||||-. ..|.+... --+++-|++.-+. .-+++++|+||+.+|=.
T Consensus 109 d~~~lGNHEfd~g~~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~ 172 (552)
T 2z1a_A 109 RAMALGNHEFDLGPGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLT 172 (552)
T ss_dssp CEEECCGGGGTTCHHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEE
T ss_pred CccccccccccCCHHHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEec
Confidence 47788999964 23333321 1267778874321 12557899999888643
No 26
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=76.76 E-value=3.3 Score=35.72 Aligned_cols=50 Identities=16% Similarity=0.039 Sum_probs=35.7
Q ss_pred CccEEEeCCCCCCccccCchhhHhhhcchhhhhccCCCCCcHHHHHHHHHhCCCEEEeeccCccccce
Q 018136 119 PIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAV 186 (360)
Q Consensus 119 ~VDILLSHdWP~gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~Ll~~LkPRYhFsgHlH~~f~a~ 186 (360)
+..|+++|-.|........ ..+...+.+++....+.+.++||.|..+...
T Consensus 106 ~~~i~~~H~~~~~~~~~~~------------------~~~~~~l~~~~~~~~~~~vi~GHtH~~~~~~ 155 (195)
T 1xm7_A 106 GKRILLSHYPAKDPITERY------------------PDRQEMVREIYFKENCDLLIHGHVHWNREGI 155 (195)
T ss_dssp TEEEEEESSCSSCSSCCSC------------------HHHHHHHHHHHHHTTCSEEEECCCCCCSCC-
T ss_pred CcEEEEEccCCcCCCcccc------------------cchHHHHHHHHHHcCCcEEEECCcCCCCccc
Confidence 5789999998866522110 0245678888888899999999999776543
No 27
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=76.33 E-value=7.2 Score=34.38 Aligned_cols=59 Identities=15% Similarity=-0.038 Sum_probs=41.8
Q ss_pred CCccEEEeCCCCCCccccCchhhHhhhcchhhhhccCCCCCcHHHHHHHHHhCCCEEEeeccCccccceeccCCCCCeeE
Q 018136 118 EPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTK 197 (360)
Q Consensus 118 ~~VDILLSHdWP~gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~Ll~~LkPRYhFsgHlH~~f~a~~~~~~~~~~TR 197 (360)
.+..|+++|..|.... .+...+.++++..++.++++||.|..+.... ..++
T Consensus 112 ~~~~i~l~Hg~~~~~~-----------------------~~~~~l~~~~~~~~~d~vl~GHtH~~~~~~~------~~~~ 162 (215)
T 2a22_A 112 GEFKIGLMHGNQVLPW-----------------------DDPGSLEQWQRRLDCDILVTGHTHKLRVFEK------NGKL 162 (215)
T ss_dssp TTEEEEEECSTTSSST-----------------------TCHHHHHHHHHHHTCSEEEECSSCCCEEEEE------TTEE
T ss_pred CCeEEEEEcCCccCCC-----------------------CCHHHHHHHHhhcCCCEEEECCcCCCccEee------CCEE
Confidence 3578999997764321 2445677788888999999999998764322 1378
Q ss_pred EEEeccCC
Q 018136 198 FLALDKCL 205 (360)
Q Consensus 198 FlaLdk~~ 205 (360)
+++-+.+.
T Consensus 163 ~inpGS~~ 170 (215)
T 2a22_A 163 FLNPGTAT 170 (215)
T ss_dssp EEECCCSS
T ss_pred EEECCccc
Confidence 88877764
No 28
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=73.89 E-value=5.8 Score=34.51 Aligned_cols=37 Identities=14% Similarity=0.064 Sum_probs=26.7
Q ss_pred HHHHHh-CCCEEEeeccCccccceeccCCCCCeeEEEEeccCCC
Q 018136 164 QLLEKL-KPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLP 206 (360)
Q Consensus 164 ~Ll~~L-kPRYhFsgHlH~~f~a~~~~~~~~~~TRFlaLdk~~~ 206 (360)
+.+... ++.++++||.|..+.... ..|.+|+-+.+..
T Consensus 130 ~~~~~~~~~d~vl~GHtH~~~~~~~------~~~~~iNpGs~~~ 167 (190)
T 1s3l_A 130 EMAIKSGLYDVVIYGHTHERVFEEV------DDVLVINPGECCG 167 (190)
T ss_dssp HHHHHHSCCSEEEEECSSCCEEEEE------TTEEEEECCCSSC
T ss_pred HHHHhcCCCCEEEECCCCCcceEEE------CCEEEEECCcccc
Confidence 344555 899999999998765433 1378888887765
No 29
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=67.27 E-value=4.6 Score=36.18 Aligned_cols=91 Identities=16% Similarity=0.121 Sum_probs=54.2
Q ss_pred cEEEeCCCCCCccccCchhhHhhhcchhhhhccCCCCCcHHHHHHHHHhCCCEEEeeccCcccccee---------ccC-
Q 018136 121 DIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVV---------QHG- 190 (360)
Q Consensus 121 DILLSHdWP~gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~Ll~~LkPRYhFsgHlH~~f~a~~---------~~~- 190 (360)
+|+++|.-|..... . .....+.+.++++..++.++|+||.|..+.... ...
T Consensus 112 ~i~~~Hg~p~~~~~-~------------------~~~~~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~ 172 (246)
T 3rqz_A 112 DWTVVHGSPRHPIW-E------------------YIYNARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPN 172 (246)
T ss_dssp TEEEESSCSSSTTT-C------------------CCCSHHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCC
T ss_pred CEEEEECCcCCccc-c------------------ccCChHHHHHHHhccCCCEEEECCcCcccEEEeccccccccccccc
Confidence 89999988876420 0 112345677888888999999999998754431 000
Q ss_pred C-----CCCeeEEEEeccCC-CCC----CeeEEeeccCCCC-CceeeeCHH
Q 018136 191 E-----DSPVTKFLALDKCL-PRR----KFLQVFEIESGQG-PYEIQYDEE 230 (360)
Q Consensus 191 ~-----~~~~TRFlaLdk~~-~~r----k~l~a~~i~~~~~-~~~l~yD~e 230 (360)
. -...+++++-+.++ |+. .-.-++++....- -.++.||.+
T Consensus 173 ~~~~~~l~~g~~ivNpGSVG~Prdg~p~A~Y~i~d~~~~~v~~~rv~Yd~~ 223 (246)
T 3rqz_A 173 DGEVLDVSSGRYIINPGAVGQPRDGDPRASYAIFEPDAQRVTFHRVEYRIA 223 (246)
T ss_dssp TTCEEECSSSCEEEEECCSSCCCSSCCSEEEEEEEGGGTEEEEEEECCCHH
T ss_pred ccceeecCCCeEEEECCccCCCCCcCCcceEEEEECCCCEEEEEEeCCCHH
Confidence 0 01127899999988 331 1333445433211 124788865
No 30
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=61.34 E-value=2.2 Score=40.27 Aligned_cols=26 Identities=23% Similarity=0.303 Sum_probs=17.8
Q ss_pred cHHHHHcCCCCCCccEEEEcCCCCCc
Q 018136 15 SFWKYYSGQEVAPIPTIFIGGNHEAS 40 (360)
Q Consensus 15 dF~~Y~sG~~kaPvpTyFIgGNHE~s 40 (360)
.|.+.+...+...+|+|+|.|||+..
T Consensus 63 ~~~~~l~~l~~~~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 63 KAIALLQIPKEHSIPVFAIEGNHDRT 88 (333)
T ss_dssp HHHHHHHHHHTTTCCEEEECCTTTCC
T ss_pred HHHHHHHHHHHCCCcEEEeCCcCCCc
Confidence 33344443334578999999999975
No 31
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=60.83 E-value=9.1 Score=38.25 Aligned_cols=23 Identities=35% Similarity=0.589 Sum_probs=15.6
Q ss_pred HHcCCCCCCccEEEEcCCCCCch
Q 018136 19 YYSGQEVAPIPTIFIGGNHEASN 41 (360)
Q Consensus 19 Y~sG~~kaPvpTyFIgGNHE~s~ 41 (360)
|-.....+.+|+++|.|||+...
T Consensus 131 y~d~n~~~~ipV~~I~GNHD~~~ 153 (431)
T 3t1i_A 131 YQDGNLNISIPVFSIHGNHDDPT 153 (431)
T ss_dssp -----CCBCSCEEECCCSSSCCB
T ss_pred cccccccCCCcEEEEccCCCCcc
Confidence 33344567899999999999763
No 32
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=49.46 E-value=7.9 Score=39.36 Aligned_cols=66 Identities=15% Similarity=0.160 Sum_probs=45.1
Q ss_pred ccccHHHHHcCCCCCCccEEEEcCCCCCchhHHHHh-cCCcc------cCcEEEeCCCcEEEECCeEEEEEcCc
Q 018136 12 EMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELY-YGGWA------APNIYFLGFAGVVKFGNIRIGGLSGI 78 (360)
Q Consensus 12 ~lgdF~~Y~sG~~kaPvpTyFIgGNHE~s~~l~el~-~GG~v------apNIyyLG~~Gvv~~~GLRIagLSGi 78 (360)
.+..|..|++-. ...+|+.+++|||+..+.....+ -.-.+ -.|+..+..-..++++|+||.|.||-
T Consensus 282 ~~~~ld~~L~~l-~~~i~V~lmPG~~DP~~~~lPQqplh~~lfp~s~~~~~~~~vtNP~~~~i~G~~~LgtsGq 354 (476)
T 3e0j_A 282 AVKMLDEILLQL-SASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 354 (476)
T ss_dssp HHHHHHHHHHHH-HTTSCEEEECCTTSSSCSSSSCCCCCTTSCHHHHTSTTEEECCSSEEEEETTEEEEECSSH
T ss_pred HHHHHHHHHHhc-ccCceEEecCCCCCcccccCCCCCcCHHHhhhhhhcCccEEeCCCeEEEECCEEEEEECCC
Confidence 455666666543 34689999999999886643211 00001 14777777777889999999999985
No 33
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=48.38 E-value=5.8 Score=34.15 Aligned_cols=37 Identities=19% Similarity=0.246 Sum_probs=25.2
Q ss_pred CCccEEEEcCCCCCchhHHHHhcCCcccCcEEEeCCCcEEEECCeEEEEEcCc
Q 018136 26 APIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGI 78 (360)
Q Consensus 26 aPvpTyFIgGNHE~s~~l~el~~GG~vapNIyyLG~~Gvv~~~GLRIagLSGi 78 (360)
...|+++|.|||+.... +...-+++++|.||+.+-|-
T Consensus 62 ~~~~~~~v~GNhD~~~~----------------lp~~~~~~~~~~~i~l~Hg~ 98 (192)
T 1z2w_A 62 LAGDVHIVRGDFDENLN----------------YPEQKVVTVGQFKIGLIHGH 98 (192)
T ss_dssp HCSEEEECCCTTCCCTT----------------SCSEEEEEETTEEEEEECSC
T ss_pred cCCCEEEEcCCcCcccc----------------CCcceEEEECCEEEEEECCC
Confidence 34689999999986541 11223457789999888654
No 34
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=46.70 E-value=27 Score=31.87 Aligned_cols=94 Identities=16% Similarity=0.075 Sum_probs=55.2
Q ss_pred CCccEEEeCCCCCCccccCchhhHhhhcchhhhhccCCCCCcHHHHHHHHHhCCCEEEeeccCccccceeccCCCCCeeE
Q 018136 118 EPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTK 197 (360)
Q Consensus 118 ~~VDILLSHdWP~gI~~~g~~~~Ll~~kp~f~~~~~~~~lGS~~i~~Ll~~LkPRYhFsgHlH~~f~a~~~~~~~~~~TR 197 (360)
.+..|+++|-.|.... +.. + ........+.++++.....+.|+||.|..+..... ..+.
T Consensus 128 ~g~~i~lvHg~p~~~~--~~~--~------------~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~~~-----~~~~ 186 (270)
T 3qfm_A 128 GDLTVGISHHLPDKNW--GRE--L------------IHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRYGT-----GGQL 186 (270)
T ss_dssp TTEEEEEESSBTTBSS--SST--T------------STTCCHHHHHHTTTTTTCSEEECCSSCSEEEEECT-----TSCE
T ss_pred CCcEEEEEECCCCCCC--Cce--e------------cCCCcHHHHHHHhcccCCCEEEECCcCchHheecc-----CCEE
Confidence 3568999998886532 100 0 00112234566666678999999999976654321 2477
Q ss_pred EEEeccCC-CC----------CCeeEEeeccCCC----CCceeeeCHHHH
Q 018136 198 FLALDKCL-PR----------RKFLQVFEIESGQ----GPYEIQYDEEWL 232 (360)
Q Consensus 198 FlaLdk~~-~~----------rk~l~a~~i~~~~----~~~~l~yD~ewl 232 (360)
+|+-+.++ |+ +.-.-++++.... .-.++.||.+-.
T Consensus 187 ~iNpGSvg~pr~~~~~~~~~~~asyaild~~~~~~~~v~~~rv~YD~~~~ 236 (270)
T 3qfm_A 187 IVNPGSIGQPFFLDAQLRKDLRAQYMILEFDDKGLVDMDFRRVDYDVAAE 236 (270)
T ss_dssp EEEECCSSSCCCSSTTGGGCCCEEEEEEEEETTEEEEEEEEEECCCHHHH
T ss_pred EEECCCccCCCCCCccccCCCCCEEEEEEecCCCceEEEEEEeCCCHHHH
Confidence 89999888 42 2233445554321 112478887643
No 35
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=45.55 E-value=26 Score=35.52 Aligned_cols=18 Identities=33% Similarity=0.519 Sum_probs=14.9
Q ss_pred CCCCccEEEEcCCCCCch
Q 018136 24 EVAPIPTIFIGGNHEASN 41 (360)
Q Consensus 24 ~kaPvpTyFIgGNHE~s~ 41 (360)
..+.+|+|+|.|||+...
T Consensus 180 ~~~gIpVf~I~GNHD~~~ 197 (472)
T 4fbk_A 180 INVAIPVFSIHGNHDDPS 197 (472)
T ss_dssp BCBSSCEEECCCCCCSCC
T ss_pred ccCCCcEEEEecCCCCcc
Confidence 356899999999998753
No 36
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=44.32 E-value=18 Score=34.65 Aligned_cols=48 Identities=23% Similarity=0.199 Sum_probs=29.7
Q ss_pred EEEcCCCCCc---hhHHHHh---cCCcccCcEEEe--C-----CCcEEEE-----C----CeEEEEEcCc
Q 018136 31 IFIGGNHEAS---NYLWELY---YGGWAAPNIYFL--G-----FAGVVKF-----G----NIRIGGLSGI 78 (360)
Q Consensus 31 yFIgGNHE~s---~~l~el~---~GG~vapNIyyL--G-----~~Gvv~~-----~----GLRIagLSGi 78 (360)
+++.||||-. ..|.+.. .--++|-||+.- | ..-|++. + |+|||.+|=.
T Consensus 96 ~~t~GNHEfd~G~~~l~~~~~~a~fp~l~aNv~~~~~g~~~~~py~I~~~~v~~~~G~~~gvkIgviG~~ 165 (339)
T 3jyf_A 96 VGNLGNHEFNYGLDFLHKALAGAKFPYVNANIIDAKTGKPMFTPYLIQDTRVVDSDGQIHTLRIGYIGFV 165 (339)
T ss_dssp EEECCGGGGTTCHHHHHHHHHTCSSCEECSSEEETTTSSBSSCCEEEEEEEEECTTSCEEEEEEEEEEEC
T ss_pred EEecchhhhhccHHHHHHHHHhcCCceeeeeeeecCCCCcccCCeEEEEEEeeccCCCcCCeEEEEEecc
Confidence 4567999943 3344433 224889999862 2 2234455 4 6999999844
No 37
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=44.14 E-value=21 Score=30.51 Aligned_cols=38 Identities=21% Similarity=0.196 Sum_probs=26.4
Q ss_pred CccEEEEcCCCCCchhHHHHhcCCcccCcEEEeCCCcEEEECCeEEEEEcC
Q 018136 27 PIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSG 77 (360)
Q Consensus 27 PvpTyFIgGNHE~s~~l~el~~GG~vapNIyyLG~~Gvv~~~GLRIagLSG 77 (360)
..|+++|.||||...++..++ ...+++++|.||...-|
T Consensus 73 ~~~v~~V~GNhD~~~~~~~lp-------------~~~~~~~~g~~i~l~HG 110 (178)
T 2kkn_A 73 SKEFYGVHGNMDYPDVKEHLP-------------FSKVLLVEGVTIGMCHG 110 (178)
T ss_dssp TSSEEECCCSSSCGGGGGTSC-------------SCEEEEETTEEEEECCS
T ss_pred CCCEEEEECCCCcHHHHhhCC-------------cceEEEECCEEEEEECC
Confidence 358999999999765433321 22356789999987755
No 38
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=43.18 E-value=19 Score=35.74 Aligned_cols=20 Identities=30% Similarity=0.453 Sum_probs=15.0
Q ss_pred CCCCCCccEEEEcCCCCCch
Q 018136 22 GQEVAPIPTIFIGGNHEASN 41 (360)
Q Consensus 22 G~~kaPvpTyFIgGNHE~s~ 41 (360)
....+.+|+|+|.|||+...
T Consensus 115 ~~~~~gIpV~~I~GNHD~~~ 134 (417)
T 4fbw_A 115 PNINVAIPVFSIHGNHDDPS 134 (417)
T ss_dssp TTBCBSSCEEECCCGGGC--
T ss_pred ccccCCCeEEEEecCCCCcc
Confidence 34467899999999998753
No 39
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=42.52 E-value=14 Score=35.48 Aligned_cols=48 Identities=15% Similarity=0.024 Sum_probs=29.3
Q ss_pred EEEcCCCCCc---hhHHHHh---cCCcccCcEEEe------CCCcEEEE-----C----CeEEEEEcCc
Q 018136 31 IFIGGNHEAS---NYLWELY---YGGWAAPNIYFL------GFAGVVKF-----G----NIRIGGLSGI 78 (360)
Q Consensus 31 yFIgGNHE~s---~~l~el~---~GG~vapNIyyL------G~~Gvv~~-----~----GLRIagLSGi 78 (360)
+++.||||-. ..|.+.. .--++|-||+.- ...-|++. + |+|||.+|=.
T Consensus 103 a~tlGNHEfd~G~~~L~~~~~~~~fp~l~aNv~~~~g~~~~~py~I~~~~~~~~~G~~~gvkIgviG~t 171 (341)
T 3gve_A 103 AGTLGNHEFNYGLDFLDGTIKGADFPIVNANVKTTSGENRYTPYVINEKTLIDENGNEQKVKVGYIGFV 171 (341)
T ss_dssp BEECCGGGGTTCHHHHHHHHHTCSSCEECSSEECTTSCBSSCCEEEEEEEEECTTSCEEEEEEEEEEEC
T ss_pred eeeccchhhccCHHHHHHHHHhcCCCEEEEeeECCCCCCccCCeEEEEEeeeccCCCcCCeEEEEEEec
Confidence 4567899943 3344443 234889999751 12234454 3 6999999844
No 40
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=35.05 E-value=24 Score=36.16 Aligned_cols=53 Identities=13% Similarity=0.097 Sum_probs=32.6
Q ss_pred CCccEEEEcCCCCCchh------HHHHh---cCCcccCcEEEeCC----------CcEEEE--CCeEEEEEcCcc
Q 018136 26 APIPTIFIGGNHEASNY------LWELY---YGGWAAPNIYFLGF----------AGVVKF--GNIRIGGLSGIY 79 (360)
Q Consensus 26 aPvpTyFIgGNHE~s~~------l~el~---~GG~vapNIyyLG~----------~Gvv~~--~GLRIagLSGi~ 79 (360)
+.+- +++.||||-..- +.+.. ..-+++-|+++... .-++++ +|+|||.+|=..
T Consensus 94 lg~D-a~tlGNHEfD~G~~~l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~kIgiiGlt~ 167 (557)
T 3c9f_A 94 QDYD-LLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLF 167 (557)
T ss_dssp SCCS-EECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECCC
T ss_pred cCCC-EEeecchhcccchHHHHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccCCEEEEEEEeec
Confidence 4444 456689997522 22211 23488999987422 235677 899999997443
No 41
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=21.09 E-value=25 Score=27.79 Aligned_cols=30 Identities=17% Similarity=0.188 Sum_probs=18.8
Q ss_pred cCCCCCCccEEEEcCCCCC-chhHHHHhcCCcc
Q 018136 21 SGQEVAPIPTIFIGGNHEA-SNYLWELYYGGWA 52 (360)
Q Consensus 21 sG~~kaPvpTyFIgGNHE~-s~~l~el~~GG~v 52 (360)
+|.. .+|++||+|.|-. .+.+.++...|.+
T Consensus 67 ~g~~--tvP~ifi~g~~iGG~d~l~~l~~~G~L 97 (111)
T 3zyw_A 67 SSWP--TYPQLYVSGELIGGLDIIKELEASEEL 97 (111)
T ss_dssp HTCC--SSCEEEETTEEEECHHHHHHHHHTTCH
T ss_pred HCCC--CCCEEEECCEEEecHHHHHHHHHCCCH
Confidence 4654 4788899997732 3556666655543
Done!