Query 018144
Match_columns 360
No_of_seqs 302 out of 1888
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 10:38:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018144.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018144hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 100.0 6.7E-32 2.3E-36 249.9 30.9 259 76-360 16-312 (322)
2 3sre_A PON1, serum paraoxonase 100.0 3.4E-28 1.1E-32 226.4 29.3 264 68-359 40-355 (355)
3 3dr2_A Exported gluconolactona 99.9 4.4E-24 1.5E-28 195.7 31.2 243 70-359 37-304 (305)
4 3e5z_A Putative gluconolactona 99.9 3.3E-22 1.1E-26 182.0 30.0 241 71-359 21-284 (296)
5 3g4e_A Regucalcin; six bladed 99.9 3.3E-22 1.1E-26 182.6 29.0 235 71-351 5-263 (297)
6 1pjx_A Dfpase, DIISOPROPYLFLUO 99.9 1.3E-21 4.3E-26 178.8 27.9 248 71-360 11-298 (314)
7 2p4o_A Hypothetical protein; p 99.9 1.3E-19 4.4E-24 166.2 28.9 213 79-351 32-279 (306)
8 2ghs_A AGR_C_1268P; regucalcin 99.9 3.6E-19 1.2E-23 164.7 30.4 231 70-352 40-294 (326)
9 1q7f_A NHL, brain tumor CG1071 99.9 4.2E-19 1.5E-23 160.3 29.5 222 76-359 27-278 (286)
10 4hw6_A Hypothetical protein, I 99.9 1.8E-19 6E-24 173.3 27.4 227 77-360 137-432 (433)
11 1rwi_B Serine/threonine-protei 99.8 9.5E-19 3.3E-23 156.2 25.7 219 80-360 25-263 (270)
12 3hrp_A Uncharacterized protein 99.8 5E-18 1.7E-22 162.1 31.9 227 77-360 129-409 (409)
13 2qc5_A Streptogramin B lactona 99.8 7.9E-18 2.7E-22 152.0 31.0 220 77-359 18-258 (300)
14 2dg1_A DRP35, lactonase; beta 99.8 2.2E-18 7.5E-23 158.9 27.7 235 78-359 44-314 (333)
15 2qc5_A Streptogramin B lactona 99.8 8.6E-18 2.9E-22 151.7 29.5 217 78-359 61-298 (300)
16 2z2n_A Virginiamycin B lyase; 99.8 2.8E-17 9.7E-22 148.2 32.1 220 77-359 13-253 (299)
17 3tc9_A Hypothetical hydrolase; 99.8 3.1E-18 1E-22 164.6 26.8 227 77-360 135-429 (430)
18 2z2n_A Virginiamycin B lyase; 99.8 1.8E-17 6.1E-22 149.5 29.6 218 78-359 56-293 (299)
19 2qe8_A Uncharacterized protein 99.8 6.6E-17 2.2E-21 150.5 26.6 223 79-352 17-312 (343)
20 3fvz_A Peptidyl-glycine alpha- 99.8 3.2E-17 1.1E-21 151.6 23.5 228 77-359 22-320 (329)
21 3kya_A Putative phosphatase; s 99.7 1.2E-15 4.1E-20 147.3 28.0 229 75-360 135-474 (496)
22 3v64_C Agrin; beta propeller, 99.7 1.3E-15 4.5E-20 142.2 24.8 190 78-325 72-284 (349)
23 4a2l_A BT_4663, two-component 99.7 6.4E-16 2.2E-20 159.5 24.9 216 81-358 359-611 (795)
24 3v64_C Agrin; beta propeller, 99.7 7.7E-15 2.6E-19 137.0 28.7 215 82-358 37-272 (349)
25 3dsm_A Uncharacterized protein 99.7 3.5E-15 1.2E-19 138.0 25.3 202 78-325 83-310 (328)
26 3a9g_A Putative uncharacterize 99.7 4.9E-15 1.7E-19 138.6 25.5 244 71-358 22-349 (354)
27 3v65_B Low-density lipoprotein 99.7 2.9E-15 9.8E-20 141.8 24.1 190 78-325 115-327 (386)
28 3v9f_A Two-component system se 99.7 2.3E-15 7.9E-20 155.0 24.8 212 81-349 315-557 (781)
29 1ijq_A LDL receptor, low-densi 99.7 9.2E-15 3.2E-19 134.6 25.6 201 78-359 29-236 (316)
30 3v9f_A Two-component system se 99.7 8.4E-16 2.9E-20 158.3 20.7 213 81-358 365-608 (781)
31 1npe_A Nidogen, entactin; glyc 99.7 1.2E-14 4.2E-19 130.0 25.4 193 79-359 36-236 (267)
32 3v65_B Low-density lipoprotein 99.7 2.4E-14 8.2E-19 135.5 28.4 216 81-358 79-315 (386)
33 1rwi_B Serine/threonine-protei 99.7 1.1E-14 3.6E-19 129.8 23.9 172 77-272 65-253 (270)
34 3sov_A LRP-6, low-density lipo 99.7 5E-15 1.7E-19 136.5 22.0 171 78-272 34-227 (318)
35 2ism_A Putative oxidoreductase 99.7 2.4E-14 8.1E-19 133.8 23.2 242 71-357 24-351 (352)
36 4a2l_A BT_4663, two-component 99.6 1.2E-14 4.3E-19 149.9 22.8 211 81-357 408-655 (795)
37 3sov_A LRP-6, low-density lipo 99.6 1.9E-13 6.3E-18 125.9 27.4 184 115-359 45-236 (318)
38 3p5b_L Low density lipoprotein 99.6 5.9E-14 2E-18 133.4 24.7 211 88-358 82-317 (400)
39 3fvz_A Peptidyl-glycine alpha- 99.6 1.3E-14 4.3E-19 134.1 19.3 180 73-272 85-311 (329)
40 4a0p_A LRP6, LRP-6, low-densit 99.6 5.2E-14 1.8E-18 141.0 25.1 175 73-272 31-226 (628)
41 3m0c_C LDL receptor, low-densi 99.6 1.6E-13 5.5E-18 140.4 27.2 216 83-358 389-629 (791)
42 3p5b_L Low density lipoprotein 99.6 1.5E-13 5E-18 130.7 24.6 171 78-272 111-309 (400)
43 1q7f_A NHL, brain tumor CG1071 99.6 2.6E-13 9E-18 122.0 22.3 190 114-359 38-236 (286)
44 3ott_A Two-component system se 99.6 8.6E-14 2.9E-18 142.8 21.3 214 81-358 326-583 (758)
45 2p9w_A MAL S 1 allergenic prot 99.6 3.1E-13 1.1E-17 123.0 21.9 178 77-272 11-254 (334)
46 2fp8_A Strictosidine synthase; 99.6 9.5E-14 3.3E-18 127.7 18.7 166 79-272 80-302 (322)
47 3s94_A LRP-6, low-density lipo 99.6 6.7E-13 2.3E-17 132.8 25.7 175 74-272 344-540 (619)
48 3vgz_A Uncharacterized protein 99.6 3.8E-12 1.3E-16 117.1 28.3 224 79-359 41-301 (353)
49 3ott_A Two-component system se 99.6 6.6E-13 2.2E-17 136.2 24.7 209 81-351 65-299 (758)
50 3s94_A LRP-6, low-density lipo 99.6 3.2E-13 1.1E-17 135.2 21.6 173 76-272 37-232 (619)
51 3hxj_A Pyrrolo-quinoline quino 99.5 1.6E-12 5.5E-17 118.9 24.0 194 89-352 107-316 (330)
52 3dsm_A Uncharacterized protein 99.5 1.7E-12 6E-17 119.7 23.9 221 79-359 44-300 (328)
53 4a0p_A LRP6, LRP-6, low-densit 99.5 1.4E-12 5E-17 130.6 24.3 176 74-272 335-538 (628)
54 3m0c_C LDL receptor, low-densi 99.5 2E-12 6.9E-17 132.3 25.6 171 78-272 423-621 (791)
55 3hrp_A Uncharacterized protein 99.5 1.9E-12 6.4E-17 123.4 23.1 172 78-272 171-399 (409)
56 3das_A Putative oxidoreductase 99.5 7E-12 2.4E-16 116.0 25.6 247 68-360 22-347 (347)
57 3e5z_A Putative gluconolactona 99.5 3E-12 1E-16 115.8 22.8 165 78-272 68-277 (296)
58 1ijq_A LDL receptor, low-densi 99.5 7E-12 2.4E-16 115.2 25.0 180 119-360 4-194 (316)
59 1n7d_A LDL receptor, low-densi 99.5 3E-13 1E-17 137.4 16.3 156 149-359 453-612 (699)
60 1npe_A Nidogen, entactin; glyc 99.5 2.7E-12 9.3E-17 114.6 20.2 157 149-360 36-197 (267)
61 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 2.4E-12 8.3E-17 116.8 20.1 167 79-272 71-288 (314)
62 2g8s_A Glucose/sorbosone dehyd 99.5 4.7E-12 1.6E-16 118.2 22.3 247 71-358 11-351 (353)
63 3hxj_A Pyrrolo-quinoline quino 99.5 6.3E-12 2.2E-16 114.9 21.9 204 82-358 63-281 (330)
64 3hfq_A Uncharacterized protein 99.5 4.9E-11 1.7E-15 110.0 26.4 228 78-359 39-315 (347)
65 4hw6_A Hypothetical protein, I 99.4 7E-12 2.4E-16 120.3 20.8 191 116-359 152-372 (433)
66 3tc9_A Hypothetical hydrolase; 99.4 5.4E-12 1.9E-16 121.0 18.7 188 116-358 149-368 (430)
67 3g4e_A Regucalcin; six bladed 99.4 4.6E-11 1.6E-15 108.4 22.6 183 111-359 19-227 (297)
68 3vgz_A Uncharacterized protein 99.4 4.2E-10 1.4E-14 103.3 29.2 206 79-350 89-334 (353)
69 2qe8_A Uncharacterized protein 99.4 4.8E-11 1.6E-15 110.7 21.8 174 76-272 64-310 (343)
70 3dr2_A Exported gluconolactona 99.4 2.7E-11 9.1E-16 110.4 18.9 168 79-272 86-297 (305)
71 3no2_A Uncharacterized protein 99.4 2.6E-10 9E-15 102.6 24.7 212 79-338 37-272 (276)
72 3kya_A Putative phosphatase; s 99.4 2.6E-11 8.8E-16 117.1 19.0 198 116-359 151-408 (496)
73 3u4y_A Uncharacterized protein 99.4 5.4E-10 1.8E-14 102.0 26.1 225 78-360 40-303 (331)
74 2dg1_A DRP35, lactonase; beta 99.3 1.2E-10 4.2E-15 106.7 20.8 187 115-359 54-261 (333)
75 2iwa_A Glutamine cyclotransfer 99.3 2.9E-10 1E-14 101.2 22.1 205 70-359 12-235 (266)
76 3no2_A Uncharacterized protein 99.3 1.3E-09 4.4E-14 98.0 25.7 177 114-351 45-233 (276)
77 2ism_A Putative oxidoreductase 99.3 2.1E-10 7.3E-15 106.9 20.8 201 114-360 39-296 (352)
78 1n7d_A LDL receptor, low-densi 99.3 1.1E-11 3.6E-16 126.0 12.4 133 116-272 464-603 (699)
79 3a9g_A Putative uncharacterize 99.3 1.4E-09 4.7E-14 101.5 23.8 147 114-273 37-218 (354)
80 1cru_A Protein (soluble quinop 99.3 1.3E-09 4.3E-14 105.1 24.1 157 71-229 20-249 (454)
81 2p4o_A Hypothetical protein; p 99.3 4.3E-10 1.5E-14 102.5 19.6 155 149-360 32-197 (306)
82 3scy_A Hypothetical bacterial 99.2 1.6E-08 5.5E-13 93.6 29.7 229 78-359 49-335 (361)
83 2ghs_A AGR_C_1268P; regucalcin 99.2 2.9E-10 1E-14 104.6 17.3 165 79-272 90-292 (326)
84 1l0q_A Surface layer protein; 99.2 2.7E-08 9.3E-13 92.8 29.7 218 79-359 32-273 (391)
85 3u4y_A Uncharacterized protein 99.2 7.5E-09 2.6E-13 94.3 24.9 211 89-359 9-250 (331)
86 3hfq_A Uncharacterized protein 99.2 7.7E-09 2.6E-13 95.1 25.0 176 78-272 85-306 (347)
87 1ri6_A Putative isomerase YBHE 99.2 1.8E-08 6.2E-13 91.7 26.6 175 79-272 38-251 (343)
88 1jof_A Carboxy-CIS,CIS-muconat 99.2 4.8E-08 1.7E-12 90.9 29.8 235 78-359 39-339 (365)
89 3das_A Putative oxidoreductase 99.1 1.6E-08 5.5E-13 93.5 24.0 195 114-360 40-291 (347)
90 3qqz_A Putative uncharacterize 99.1 2.8E-08 9.4E-13 87.9 23.8 180 76-272 24-243 (255)
91 2p9w_A MAL S 1 allergenic prot 99.1 6.1E-09 2.1E-13 94.8 19.7 159 149-360 13-214 (334)
92 3nol_A Glutamine cyclotransfer 99.1 2E-08 6.7E-13 88.6 21.9 184 116-359 52-254 (262)
93 2iwa_A Glutamine cyclotransfer 99.1 1.2E-08 3.9E-13 90.9 20.2 143 76-237 63-236 (266)
94 3nol_A Glutamine cyclotransfer 99.1 1.5E-08 5.3E-13 89.3 20.1 138 80-236 88-254 (262)
95 1ri6_A Putative isomerase YBHE 99.1 1E-07 3.6E-12 86.6 26.4 163 90-272 5-198 (343)
96 3nok_A Glutaminyl cyclase; bet 99.0 4.1E-08 1.4E-12 86.6 21.3 189 110-359 58-264 (268)
97 3nok_A Glutaminyl cyclase; bet 99.0 2.3E-08 7.7E-13 88.3 18.8 138 80-236 97-264 (268)
98 3mbr_X Glutamine cyclotransfer 99.0 4.7E-08 1.6E-12 85.4 20.7 139 79-236 65-233 (243)
99 1cru_A Protein (soluble quinop 99.0 4.6E-09 1.6E-13 101.2 15.4 180 148-352 26-249 (454)
100 3bws_A Protein LP49; two-domai 99.0 2.3E-07 7.9E-12 87.7 27.0 237 80-360 171-431 (433)
101 3bws_A Protein LP49; two-domai 99.0 3E-07 1E-11 86.8 27.4 209 79-352 123-367 (433)
102 1nir_A Nitrite reductase; hemo 99.0 2.6E-07 8.9E-12 91.0 27.4 219 85-360 144-401 (543)
103 1l0q_A Surface layer protein; 99.0 4.1E-07 1.4E-11 84.6 27.1 178 117-359 44-231 (391)
104 2g8s_A Glucose/sorbosone dehyd 99.0 9.2E-09 3.2E-13 95.8 15.3 161 148-352 17-219 (353)
105 1pby_B Quinohemoprotein amine 99.0 1.8E-07 6.2E-12 84.8 23.5 210 80-359 35-308 (337)
106 3scy_A Hypothetical bacterial 99.0 3.1E-07 1.1E-11 84.8 24.8 174 79-272 100-326 (361)
107 3q6k_A 43.2 kDa salivary prote 98.9 4.3E-07 1.5E-11 84.6 24.2 147 149-350 152-343 (381)
108 3mbr_X Glutamine cyclotransfer 98.9 3.8E-07 1.3E-11 79.7 22.1 153 149-359 21-177 (243)
109 2wg3_C Hedgehog-interacting pr 98.9 4.4E-07 1.5E-11 87.3 22.4 155 71-226 7-242 (463)
110 1jof_A Carboxy-CIS,CIS-muconat 98.8 4.6E-06 1.6E-10 77.4 27.5 144 118-271 53-212 (365)
111 3qqz_A Putative uncharacterize 98.8 4.3E-06 1.5E-10 73.8 25.5 185 116-358 38-250 (255)
112 4a9v_A PHOX; hydrolase, beta-p 98.8 1.2E-08 4.1E-13 98.8 9.5 77 145-227 472-551 (592)
113 3sre_A PON1, serum paraoxonase 98.8 3.9E-07 1.3E-11 84.4 18.7 184 149-360 50-251 (355)
114 3q7m_A Lipoprotein YFGL, BAMB; 98.8 2.8E-06 9.5E-11 79.0 24.5 202 88-358 102-334 (376)
115 1jmx_B Amine dehydrogenase; ox 98.8 2.6E-06 8.9E-11 77.5 23.2 79 208-328 256-337 (349)
116 1nir_A Nitrite reductase; hemo 98.7 2E-06 7E-11 84.6 23.8 224 80-360 180-457 (543)
117 1jmx_B Amine dehydrogenase; ox 98.7 2.4E-06 8.1E-11 77.8 22.5 101 150-269 44-164 (349)
118 3c75_H MADH, methylamine dehyd 98.7 2.7E-06 9.3E-11 80.8 22.5 224 90-360 85-401 (426)
119 2ece_A 462AA long hypothetical 98.7 3.5E-06 1.2E-10 79.9 22.3 177 78-271 137-400 (462)
120 3q7m_A Lipoprotein YFGL, BAMB; 98.7 8.2E-06 2.8E-10 75.8 24.8 199 89-352 143-370 (376)
121 1qks_A Cytochrome CD1 nitrite 98.7 9.9E-06 3.4E-10 80.0 26.0 215 86-359 163-419 (567)
122 1gxr_A ESG1, transducin-like e 98.6 6E-05 2.1E-09 67.7 28.4 213 80-359 99-335 (337)
123 2ece_A 462AA long hypothetical 98.6 1.4E-05 4.8E-10 75.7 23.5 178 89-272 95-341 (462)
124 1qks_A Cytochrome CD1 nitrite 98.6 4.7E-05 1.6E-09 75.2 27.4 229 79-359 197-475 (567)
125 3s25_A Hypothetical 7-bladed b 98.5 2.1E-05 7.1E-10 71.3 22.3 203 81-360 57-292 (302)
126 3s25_A Hypothetical 7-bladed b 98.5 3E-05 1E-09 70.3 23.0 200 89-360 25-254 (302)
127 1pby_B Quinohemoprotein amine 98.5 1.4E-05 4.7E-10 72.1 20.8 114 117-239 46-164 (337)
128 2mad_H Methylamine dehydrogena 98.5 3.3E-05 1.1E-09 72.1 23.5 80 150-239 68-157 (373)
129 4ery_A WD repeat-containing pr 98.5 0.00021 7.2E-09 64.0 28.2 169 79-272 24-212 (312)
130 3sjl_D Methylamine dehydrogena 98.5 3.9E-05 1.3E-09 71.8 22.8 192 79-327 137-374 (386)
131 3ow8_A WD repeat-containing pr 98.5 0.00036 1.2E-08 63.3 28.7 217 79-359 81-319 (321)
132 2oiz_A Aromatic amine dehydrog 98.5 2.8E-05 9.6E-10 72.2 21.3 76 186-265 285-360 (361)
133 2mad_H Methylamine dehydrogena 98.4 0.00036 1.2E-08 65.1 28.3 231 72-360 62-349 (373)
134 1fwx_A Nitrous oxide reductase 98.4 3.5E-05 1.2E-09 75.5 21.1 195 72-272 81-350 (595)
135 3c75_H MADH, methylamine dehyd 98.4 5.7E-06 2E-10 78.6 14.9 121 158-326 82-219 (426)
136 2ymu_A WD-40 repeat protein; u 98.4 0.00022 7.5E-09 69.6 26.9 212 79-356 345-575 (577)
137 1gxr_A ESG1, transducin-like e 98.4 0.00045 1.6E-08 61.9 26.9 169 79-271 52-243 (337)
138 3sjl_D Methylamine dehydrogena 98.4 1E-05 3.5E-10 75.7 16.0 123 156-326 40-179 (386)
139 2oiz_A Aromatic amine dehydrog 98.4 0.00033 1.1E-08 64.9 26.3 44 308-359 286-332 (361)
140 1k8k_C P40, ARP2/3 complex 41 98.3 0.00053 1.8E-08 62.5 26.9 220 80-359 10-272 (372)
141 2ymu_A WD-40 repeat protein; u 98.3 0.00061 2.1E-08 66.4 28.4 167 79-272 304-487 (577)
142 3ow8_A WD repeat-containing pr 98.3 0.0023 8E-08 57.9 29.6 166 80-271 34-225 (321)
143 1mda_H Methylamine dehydrogena 98.3 3.5E-05 1.2E-09 71.8 17.0 78 150-236 67-156 (368)
144 2hqs_A Protein TOLB; TOLB, PAL 98.3 0.00051 1.7E-08 64.8 25.5 128 118-269 192-327 (415)
145 2ojh_A Uncharacterized protein 98.3 0.00069 2.4E-08 59.2 24.6 134 116-270 52-191 (297)
146 2hqs_A Protein TOLB; TOLB, PAL 98.2 0.00033 1.1E-08 66.1 23.6 192 80-328 180-398 (415)
147 3q6k_A 43.2 kDa salivary prote 98.2 0.0011 3.6E-08 61.7 26.1 178 77-272 85-343 (381)
148 4gqb_B Methylosome protein 50; 98.2 0.00079 2.7E-08 61.9 24.5 163 81-268 85-273 (344)
149 2vdu_B TRNA (guanine-N(7)-)-me 98.2 0.0013 4.6E-08 62.3 26.8 102 150-272 151-260 (450)
150 1got_B GT-beta; complex (GTP-b 98.2 0.0022 7.6E-08 58.3 27.1 212 81-356 100-338 (340)
151 1got_B GT-beta; complex (GTP-b 98.2 0.0021 7.1E-08 58.5 26.8 171 78-272 55-246 (340)
152 2z3z_A Dipeptidyl aminopeptida 98.2 0.00085 2.9E-08 67.5 26.1 185 79-268 82-327 (706)
153 4g56_B MGC81050 protein; prote 98.2 0.0002 6.7E-09 66.1 19.8 169 81-268 45-243 (357)
154 3zwl_B Eukaryotic translation 98.2 0.0017 5.8E-08 58.8 25.9 234 79-359 75-344 (369)
155 1r5m_A SIR4-interacting protei 98.1 0.001 3.6E-08 61.5 24.4 218 80-359 110-359 (425)
156 2ojh_A Uncharacterized protein 98.1 0.00085 2.9E-08 58.6 22.5 165 79-268 42-232 (297)
157 3amr_A 3-phytase; beta-propell 98.1 0.00028 9.5E-09 64.7 19.4 132 188-359 102-261 (355)
158 4aez_A CDC20, WD repeat-contai 98.1 0.0034 1.2E-07 58.4 27.2 166 80-271 136-322 (401)
159 1erj_A Transcriptional repress 98.1 0.0051 1.7E-07 57.2 28.3 216 82-358 127-386 (393)
160 1mda_H Methylamine dehydrogena 98.1 3.7E-05 1.3E-09 71.6 13.2 98 160-272 32-144 (368)
161 3vl1_A 26S proteasome regulato 98.1 0.0012 4E-08 61.5 23.7 136 81-238 59-212 (420)
162 1sq9_A Antiviral protein SKI8; 98.1 0.0026 8.8E-08 58.6 25.8 156 149-359 187-393 (397)
163 1r5m_A SIR4-interacting protei 98.1 0.00061 2.1E-08 63.1 21.5 166 79-271 150-349 (425)
164 4gqb_B Methylosome protein 50; 98.1 0.0026 9E-08 58.3 25.2 169 81-269 33-232 (344)
165 3vl1_A 26S proteasome regulato 98.1 0.0018 6E-08 60.3 24.4 213 85-359 104-363 (420)
166 2ynn_A Coatomer subunit beta'; 98.0 0.0052 1.8E-07 54.8 26.5 137 79-238 14-172 (304)
167 2pm9_A Protein WEB1, protein t 98.0 0.0012 4E-08 61.3 22.6 224 80-359 69-335 (416)
168 3o4h_A Acylamino-acid-releasin 98.0 0.00046 1.6E-08 67.9 20.7 130 119-272 125-265 (582)
169 3b7f_A Glycosyl hydrolase, BNR 98.0 0.00025 8.4E-09 66.5 17.9 204 86-349 19-298 (394)
170 3odt_A Protein DOA1; ubiquitin 98.0 0.0064 2.2E-07 53.6 26.3 213 79-359 60-294 (313)
171 3pe7_A Oligogalacturonate lyas 98.0 0.0004 1.4E-08 64.1 18.4 140 83-239 85-274 (388)
172 1vyh_C Platelet-activating fac 98.0 0.0047 1.6E-07 57.8 25.7 137 79-238 109-265 (410)
173 4g56_B MGC81050 protein; prote 98.0 0.0015 5.2E-08 60.1 21.4 164 81-269 97-286 (357)
174 1vyh_C Platelet-activating fac 97.9 0.0053 1.8E-07 57.5 25.5 216 80-359 152-409 (410)
175 3mkq_A Coatomer beta'-subunit; 97.9 0.009 3.1E-07 60.7 29.1 169 79-272 14-206 (814)
176 3ei3_B DNA damage-binding prot 97.9 0.0024 8.1E-08 58.8 22.7 170 79-270 74-269 (383)
177 4ery_A WD repeat-containing pr 97.9 0.0096 3.3E-07 53.0 28.4 137 79-238 66-223 (312)
178 1sq9_A Antiviral protein SKI8; 97.9 0.0061 2.1E-07 56.0 25.1 226 79-359 17-320 (397)
179 1erj_A Transcriptional repress 97.9 0.014 4.8E-07 54.1 27.7 168 80-271 66-275 (393)
180 3i2n_A WD repeat-containing pr 97.9 0.0038 1.3E-07 56.3 23.1 167 80-265 67-272 (357)
181 3pe7_A Oligogalacturonate lyas 97.9 0.0033 1.1E-07 57.8 22.9 181 85-270 42-257 (388)
182 2z3z_A Dipeptidyl aminopeptida 97.9 0.0045 1.5E-07 62.1 25.5 133 118-270 271-418 (706)
183 2ecf_A Dipeptidyl peptidase IV 97.9 0.0019 6.5E-08 65.2 22.7 186 81-270 111-354 (741)
184 1fwx_A Nitrous oxide reductase 97.9 0.0013 4.6E-08 64.3 20.4 109 116-228 101-216 (595)
185 3zwl_B Eukaryotic translation 97.9 0.014 4.7E-07 52.6 26.6 155 150-359 76-247 (369)
186 2ad6_A Methanol dehydrogenase 97.9 0.0087 3E-07 59.0 26.3 42 308-351 485-527 (571)
187 3jrp_A Fusion protein of prote 97.9 0.012 4.2E-07 53.3 25.8 173 79-271 12-228 (379)
188 2pbi_B Guanine nucleotide-bind 97.8 0.017 5.7E-07 52.9 26.5 214 80-356 108-352 (354)
189 3fm0_A Protein CIAO1; WDR39,SG 97.8 0.013 4.5E-07 53.2 25.4 170 81-271 19-213 (345)
190 3zwu_A Alkaline phosphatase PH 97.8 8.9E-05 3E-09 73.0 11.0 75 146-225 473-549 (592)
191 3iz6_a 40S ribosomal protein R 97.8 0.02 6.9E-07 52.8 27.7 139 184-359 225-373 (380)
192 1kb0_A Quinohemoprotein alcoho 97.8 0.007 2.4E-07 60.9 25.0 40 308-349 498-538 (677)
193 1k8k_C P40, ARP2/3 complex 41 97.8 0.0096 3.3E-07 54.0 23.8 170 79-270 53-262 (372)
194 2aq5_A Coronin-1A; WD40 repeat 97.8 0.0034 1.2E-07 58.3 21.1 171 79-268 132-329 (402)
195 1pgu_A Actin interacting prote 97.8 0.027 9.2E-07 54.8 28.4 218 81-359 67-326 (615)
196 4e54_B DNA damage-binding prot 97.8 0.0015 5.2E-08 61.7 18.6 170 81-270 122-314 (435)
197 2vdu_B TRNA (guanine-N(7)-)-me 97.8 0.011 3.7E-07 55.9 24.6 169 79-272 150-373 (450)
198 1pgu_A Actin interacting prote 97.8 0.012 4.2E-07 57.3 25.4 228 79-359 19-281 (615)
199 3dwl_C Actin-related protein 2 97.8 0.0015 5.2E-08 59.9 17.8 138 80-237 13-176 (377)
200 2ecf_A Dipeptidyl peptidase IV 97.7 0.0053 1.8E-07 61.9 22.6 123 127-270 313-442 (741)
201 3azo_A Aminopeptidase; POP fam 97.7 0.0011 3.7E-08 66.1 17.2 145 119-271 94-260 (662)
202 3azo_A Aminopeptidase; POP fam 97.7 0.0057 2E-07 60.8 22.4 108 150-271 189-312 (662)
203 2ad6_A Methanol dehydrogenase 97.7 0.03 1E-06 55.1 27.2 50 84-135 111-186 (571)
204 3ei3_B DNA damage-binding prot 97.7 0.0092 3.2E-07 54.7 22.2 136 80-238 120-282 (383)
205 3b7f_A Glycosyl hydrolase, BNR 97.7 0.0028 9.5E-08 59.2 18.7 170 79-271 55-298 (394)
206 1w6s_A Methanol dehydrogenase 97.7 0.024 8.3E-07 56.1 26.0 43 307-351 493-536 (599)
207 3frx_A Guanine nucleotide-bind 97.7 0.029 1E-06 50.3 26.7 169 79-272 18-216 (319)
208 3odt_A Protein DOA1; ubiquitin 97.7 0.024 8.3E-07 49.8 23.8 212 79-359 19-253 (313)
209 1tl2_A L10, protein (tachylect 97.7 0.002 6.9E-08 54.9 15.3 147 65-235 27-207 (236)
210 3dm0_A Maltose-binding peripla 97.6 0.039 1.3E-06 55.3 27.7 170 80-272 432-622 (694)
211 2aq5_A Coronin-1A; WD40 repeat 97.6 0.024 8.3E-07 52.4 24.5 168 79-268 82-283 (402)
212 3mkq_A Coatomer beta'-subunit; 97.6 0.01 3.6E-07 60.2 23.7 168 79-271 56-247 (814)
213 4a11_B DNA excision repair pro 97.6 0.036 1.2E-06 50.7 26.5 137 79-238 100-276 (408)
214 3k26_A Polycomb protein EED; W 97.6 0.03 1E-06 50.3 24.6 144 72-238 12-192 (366)
215 3amr_A 3-phytase; beta-propell 97.6 0.015 5.3E-07 53.2 21.9 167 87-272 37-252 (355)
216 1kb0_A Quinohemoprotein alcoho 97.6 0.0084 2.9E-07 60.4 22.3 100 89-201 77-204 (677)
217 3sfz_A APAF-1, apoptotic pepti 97.6 0.025 8.7E-07 60.5 27.2 171 79-272 616-818 (1249)
218 2xyi_A Probable histone-bindin 97.6 0.014 4.7E-07 54.9 22.5 173 79-271 129-341 (430)
219 4aez_A CDC20, WD repeat-contai 97.6 0.05 1.7E-06 50.3 27.7 158 84-270 99-278 (401)
220 3k26_A Polycomb protein EED; W 97.6 0.022 7.5E-07 51.2 22.4 137 80-238 71-260 (366)
221 1yfq_A Cell cycle arrest prote 97.5 0.023 7.8E-07 50.8 22.1 169 79-272 12-214 (342)
222 2wg3_C Hedgehog-interacting pr 97.5 0.00084 2.9E-08 64.4 12.8 108 148-273 13-159 (463)
223 3sfz_A APAF-1, apoptotic pepti 97.5 0.035 1.2E-06 59.4 26.8 168 79-272 658-860 (1249)
224 1nr0_A Actin interacting prote 97.5 0.033 1.1E-06 54.9 24.9 60 209-271 451-510 (611)
225 1flg_A Protein (quinoprotein e 97.5 0.041 1.4E-06 54.3 25.0 41 308-350 507-548 (582)
226 3c5m_A Oligogalacturonate lyas 97.5 0.014 4.8E-07 53.4 20.3 121 127-270 169-300 (396)
227 1nr0_A Actin interacting prote 97.5 0.036 1.2E-06 54.7 24.4 172 79-272 19-210 (611)
228 3v7d_B Cell division control p 97.5 0.072 2.5E-06 50.1 26.5 170 116-352 280-454 (464)
229 3lrv_A PRE-mRNA-splicing facto 97.5 0.027 9.3E-07 50.9 21.9 104 150-272 127-234 (343)
230 4h5i_A Guanine nucleotide-exch 97.4 0.047 1.6E-06 50.1 23.2 154 150-359 178-341 (365)
231 3o4h_A Acylamino-acid-releasin 97.4 0.0032 1.1E-07 61.7 16.1 161 80-272 111-301 (582)
232 2pbi_B Guanine nucleotide-bind 97.4 0.058 2E-06 49.2 23.4 164 82-271 158-345 (354)
233 4h5i_A Guanine nucleotide-exch 97.4 0.01 3.5E-07 54.7 18.2 139 80-237 178-342 (365)
234 1kv9_A Type II quinohemoprotei 97.4 0.04 1.4E-06 55.3 23.5 41 308-350 479-520 (668)
235 3dm0_A Maltose-binding peripla 97.4 0.043 1.5E-06 55.0 23.8 168 80-272 384-581 (694)
236 1xfd_A DIP, dipeptidyl aminope 97.4 0.0055 1.9E-07 61.6 17.2 56 151-225 116-191 (723)
237 3dw8_B Serine/threonine-protei 97.4 0.059 2E-06 50.1 23.4 104 150-272 179-305 (447)
238 2hz6_A Endoplasmic reticulum t 97.4 0.00055 1.9E-08 63.6 9.0 128 85-238 6-149 (369)
239 3iz6_a 40S ribosomal protein R 97.3 0.054 1.9E-06 49.8 22.4 157 90-271 171-363 (380)
240 2xzm_R RACK1; ribosome, transl 97.3 0.088 3E-06 47.5 25.3 168 80-270 78-273 (343)
241 2xbg_A YCF48-like protein; pho 97.3 0.094 3.2E-06 47.4 24.5 169 80-272 37-224 (327)
242 1yiq_A Quinohemoprotein alcoho 97.3 0.062 2.1E-06 54.1 23.7 41 308-350 496-537 (689)
243 3fm0_A Protein CIAO1; WDR39,SG 97.3 0.033 1.1E-06 50.5 19.9 102 150-270 63-168 (345)
244 1k32_A Tricorn protease; prote 97.3 0.065 2.2E-06 56.5 24.6 131 83-226 342-491 (1045)
245 3i2n_A WD repeat-containing pr 97.3 0.037 1.3E-06 49.6 20.0 166 79-271 19-231 (357)
246 4a5s_A Dipeptidyl peptidase 4 97.2 0.093 3.2E-06 53.1 24.3 138 187-359 228-398 (740)
247 4a11_B DNA excision repair pro 97.2 0.053 1.8E-06 49.5 20.7 138 79-238 44-218 (408)
248 3gre_A Serine/threonine-protei 97.2 0.14 4.7E-06 47.6 23.8 139 184-359 189-357 (437)
249 3f3f_A Nucleoporin SEH1; struc 97.2 0.11 3.6E-06 45.9 23.3 134 79-232 12-195 (351)
250 2xdw_A Prolyl endopeptidase; a 97.2 0.24 8.1E-06 49.7 26.8 173 83-271 129-354 (710)
251 3jro_A Fusion protein of prote 97.2 0.022 7.6E-07 57.9 19.0 172 80-271 11-226 (753)
252 2pm9_A Protein WEB1, protein t 97.2 0.02 6.8E-07 52.8 17.2 133 118-271 81-234 (416)
253 3frx_A Guanine nucleotide-bind 97.1 0.14 4.7E-06 45.8 27.1 166 80-272 67-257 (319)
254 1yiq_A Quinohemoprotein alcoho 97.1 0.071 2.4E-06 53.6 21.8 100 89-201 70-197 (689)
255 2ovr_B FBW7, F-BOX/WD repeat p 97.1 0.2 6.8E-06 46.8 27.2 131 185-359 257-389 (445)
256 1kv9_A Type II quinohemoprotei 97.1 0.035 1.2E-06 55.7 19.2 99 89-201 66-192 (668)
257 3c5m_A Oligogalacturonate lyas 97.1 0.044 1.5E-06 50.0 18.5 83 185-270 166-256 (396)
258 2j04_A TAU60, YPL007P, hypothe 97.0 0.27 9.3E-06 48.1 26.7 99 150-270 131-242 (588)
259 2xdw_A Prolyl endopeptidase; a 97.0 0.14 4.9E-06 51.4 23.3 101 151-265 127-245 (710)
260 2ovr_B FBW7, F-BOX/WD repeat p 97.0 0.22 7.6E-06 46.5 26.8 136 184-360 296-441 (445)
261 3mmy_A MRNA export factor; mRN 97.0 0.14 4.6E-06 45.9 21.1 82 79-165 40-146 (368)
262 4aow_A Guanine nucleotide-bind 97.0 0.17 5.9E-06 44.8 27.4 170 79-272 87-276 (340)
263 3lrv_A PRE-mRNA-splicing facto 97.0 0.19 6.5E-06 45.2 29.2 131 116-270 138-278 (343)
264 1k32_A Tricorn protease; prote 97.0 0.021 7E-07 60.4 17.4 165 80-271 297-491 (1045)
265 3v7d_B Cell division control p 97.0 0.25 8.5E-06 46.3 27.8 54 184-238 287-341 (464)
266 2xbg_A YCF48-like protein; pho 97.0 0.2 6.9E-06 45.2 24.6 212 82-357 83-318 (327)
267 1xfd_A DIP, dipeptidyl aminope 97.0 0.12 4E-06 51.7 22.0 186 80-269 62-323 (723)
268 1yfq_A Cell cycle arrest prote 96.9 0.054 1.9E-06 48.3 17.2 99 150-272 58-169 (342)
269 3jrp_A Fusion protein of prote 96.9 0.17 5.8E-06 45.5 20.8 72 150-239 57-135 (379)
270 2bkl_A Prolyl endopeptidase; m 96.9 0.16 5.4E-06 50.9 22.3 105 151-270 123-245 (695)
271 3dw8_B Serine/threonine-protei 96.9 0.22 7.7E-06 46.1 22.0 143 78-239 177-374 (447)
272 2ynn_A Coatomer subunit beta'; 96.9 0.22 7.5E-06 44.0 25.0 166 82-272 59-248 (304)
273 2gop_A Trilobed protease; beta 96.9 0.13 4.4E-06 46.1 19.5 100 151-270 61-187 (347)
274 2oaj_A Protein SNI1; WD40 repe 96.8 0.091 3.1E-06 54.6 20.6 168 79-272 18-231 (902)
275 4a9v_A PHOX; hydrolase, beta-p 96.8 0.017 5.8E-07 56.2 13.8 116 208-348 385-549 (592)
276 3gre_A Serine/threonine-protei 96.8 0.18 6.3E-06 46.8 20.7 139 79-238 112-292 (437)
277 1p22_A F-BOX/WD-repeat protein 96.8 0.3 1E-05 45.5 22.3 52 184-238 273-325 (435)
278 3iuj_A Prolyl endopeptidase; h 96.8 0.42 1.4E-05 47.9 24.4 81 152-247 237-323 (693)
279 3dwl_C Actin-related protein 2 96.8 0.006 2.1E-07 55.8 10.0 103 150-270 57-164 (377)
280 2xyi_A Probable histone-bindin 96.8 0.15 5.2E-06 47.6 19.9 154 150-359 183-351 (430)
281 2hes_X YDR267CP; beta-propelle 96.7 0.3 1E-05 43.7 24.0 103 150-271 60-172 (330)
282 3zwu_A Alkaline phosphatase PH 96.6 0.026 8.8E-07 55.5 13.7 115 208-347 385-548 (592)
283 1flg_A Protein (quinoprotein e 96.6 0.25 8.6E-06 48.6 20.7 100 89-201 68-198 (582)
284 4gga_A P55CDC, cell division c 96.6 0.45 1.6E-05 44.1 26.2 216 82-359 151-393 (420)
285 3iuj_A Prolyl endopeptidase; h 96.6 0.5 1.7E-05 47.3 23.1 106 150-270 130-252 (693)
286 1z68_A Fibroblast activation p 96.5 0.16 5.3E-06 50.9 18.8 153 81-235 62-284 (719)
287 3vu4_A KMHSV2; beta-propeller 96.5 0.49 1.7E-05 42.9 25.7 86 183-271 155-259 (355)
288 2j04_B YDR362CP, TAU91; beta p 96.4 0.14 4.8E-06 49.7 17.6 138 80-238 268-428 (524)
289 1w6s_A Methanol dehydrogenase 96.4 0.49 1.7E-05 46.7 21.6 99 89-201 62-196 (599)
290 1yr2_A Prolyl oligopeptidase; 96.4 0.67 2.3E-05 46.7 23.2 105 151-270 165-286 (741)
291 2bkl_A Prolyl endopeptidase; m 96.4 0.42 1.4E-05 47.8 21.1 104 151-271 229-337 (695)
292 1tl2_A L10, protein (tachylect 96.4 0.016 5.4E-07 49.5 8.8 100 150-272 42-153 (236)
293 4e54_B DNA damage-binding prot 96.3 0.18 6.1E-06 47.2 17.1 123 119-265 135-263 (435)
294 1z68_A Fibroblast activation p 96.3 0.075 2.6E-06 53.3 15.2 116 83-225 20-187 (719)
295 3jro_A Fusion protein of prote 96.3 0.37 1.3E-05 48.8 20.4 72 150-239 55-133 (753)
296 1yr2_A Prolyl oligopeptidase; 96.2 1.2 4E-05 44.9 23.8 104 151-270 270-380 (741)
297 2xzm_R RACK1; ribosome, transl 96.0 0.78 2.7E-05 41.1 25.1 71 150-238 78-149 (343)
298 3f3f_A Nucleoporin SEH1; struc 96.0 0.73 2.5E-05 40.3 23.6 71 150-238 59-143 (351)
299 2gop_A Trilobed protease; beta 96.0 0.8 2.7E-05 40.7 22.1 117 127-271 153-280 (347)
300 4aow_A Guanine nucleotide-bind 96.0 0.78 2.7E-05 40.4 26.6 170 79-272 39-235 (340)
301 1p22_A F-BOX/WD-repeat protein 95.8 1.2 4.2E-05 41.3 24.9 52 185-239 191-243 (435)
302 3bg1_A Protein SEC13 homolog; 95.8 0.98 3.3E-05 40.0 20.8 83 81-165 16-122 (316)
303 2hes_X YDR267CP; beta-propelle 95.4 1.4 4.7E-05 39.3 24.3 138 80-237 60-229 (330)
304 2oit_A Nucleoporin 214KDA; NH2 95.1 0.18 6.1E-06 47.6 11.7 102 150-272 94-213 (434)
305 3mmy_A MRNA export factor; mRN 94.9 1.9 6.6E-05 38.1 20.8 71 150-238 88-160 (368)
306 4ggc_A P55CDC, cell division c 94.8 1.8 6.3E-05 37.5 26.3 216 82-359 71-313 (318)
307 2oaj_A Protein SNI1; WD40 repe 94.7 2 7E-05 44.4 19.4 97 150-269 19-115 (902)
308 2pm7_B Protein transport prote 94.6 2.1 7.3E-05 37.3 27.3 164 80-264 11-216 (297)
309 2xe4_A Oligopeptidase B; hydro 94.5 1.4 4.9E-05 44.5 17.4 104 151-270 176-289 (751)
310 2j04_A TAU60, YPL007P, hypothe 94.2 1.5 5E-05 42.9 15.8 111 208-359 87-209 (588)
311 2hz6_A Endoplasmic reticulum t 93.8 0.038 1.3E-06 51.0 3.8 50 186-237 18-67 (369)
312 2j04_B YDR362CP, TAU91; beta p 93.8 1.8 6E-05 41.9 15.7 164 80-269 209-414 (524)
313 4a5s_A Dipeptidyl peptidase 4 93.7 1 3.4E-05 45.4 14.4 77 152-239 65-142 (740)
314 3vu4_A KMHSV2; beta-propeller 93.4 1.2 4.2E-05 40.1 13.2 72 150-239 197-272 (355)
315 1k3i_A Galactose oxidase precu 92.8 4.3 0.00015 40.1 17.2 56 84-139 248-329 (656)
316 2be1_A Serine/threonine-protei 92.6 0.4 1.4E-05 43.6 8.5 96 89-203 10-137 (339)
317 3bg1_A Protein SEC13 homolog; 92.2 5.7 0.00019 34.9 18.7 71 150-238 59-136 (316)
318 2pm7_B Protein transport prote 91.4 6.6 0.00023 34.0 21.1 71 150-238 55-132 (297)
319 2oit_A Nucleoporin 214KDA; NH2 90.7 4.7 0.00016 37.6 14.1 72 149-238 150-223 (434)
320 4gga_A P55CDC, cell division c 89.4 12 0.00042 34.1 28.7 130 83-238 110-261 (420)
321 2w18_A PALB2, fancn, partner a 87.2 17 0.00058 33.0 22.3 55 151-222 181-242 (356)
322 4gq1_A NUP37; propeller, trans 86.9 12 0.00042 33.9 13.8 53 184-238 336-389 (393)
323 2be1_A Serine/threonine-protei 84.4 3.6 0.00012 37.3 8.5 105 184-325 17-139 (339)
324 3sbq_A Nitrous-oxide reductase 84.2 3.6 0.00012 40.0 8.6 85 188-272 299-397 (638)
325 2cn3_A Xyloglucanase, beta-1,4 82.1 44 0.0015 33.4 24.4 26 80-105 24-51 (737)
326 1sqj_A OXG-RCBH, oligoxylogluc 80.2 53 0.0018 33.2 24.4 29 79-107 15-46 (789)
327 2zwa_A Leucine carboxyl methyl 78.2 57 0.0019 32.4 19.5 135 88-240 396-579 (695)
328 4gq1_A NUP37; propeller, trans 77.9 14 0.00046 33.6 10.2 73 149-238 137-218 (393)
329 1xip_A Nucleoporin NUP159; bet 76.3 47 0.0016 30.4 19.6 116 79-223 88-230 (388)
330 2xe4_A Oligopeptidase B; hydro 71.1 87 0.003 31.2 17.4 75 152-239 224-305 (751)
331 1k3i_A Galactose oxidase precu 70.5 40 0.0014 33.1 12.1 82 189-271 168-261 (656)
332 4ggc_A P55CDC, cell division c 66.6 58 0.002 27.5 28.2 52 186-238 128-181 (318)
333 3a0f_A Xyloglucanase; beta-pro 65.8 1.1E+02 0.0039 30.5 23.9 27 79-105 21-49 (763)
334 3s9j_A Member of DUF4221 famil 62.9 38 0.0013 30.8 9.4 99 216-348 37-149 (369)
335 1sqj_A OXG-RCBH, oligoxylogluc 59.6 1.4E+02 0.0049 30.0 14.0 58 150-225 16-83 (789)
336 3a0f_A Xyloglucanase; beta-pro 56.3 79 0.0027 31.7 11.4 138 83-236 592-760 (763)
337 2cn3_A Xyloglucanase, beta-1,4 49.3 1.4E+02 0.0049 29.6 11.9 58 150-225 24-91 (737)
338 2xn4_A Kelch-like protein 2; s 47.5 1.3E+02 0.0044 25.5 21.6 188 116-359 61-274 (302)
339 4asc_A Kelch repeat and BTB do 47.3 1.4E+02 0.0046 25.7 22.8 123 186-347 116-249 (315)
340 3sbq_A Nitrous-oxide reductase 46.7 2.2E+02 0.0074 27.8 12.3 65 207-272 378-454 (638)
341 1zgk_A Kelch-like ECH-associat 46.6 1.4E+02 0.0047 25.5 24.5 49 187-238 137-193 (308)
342 3ii7_A Kelch-like protein 7; p 46.5 1.4E+02 0.0047 25.4 20.1 50 186-238 69-127 (306)
343 2uvk_A YJHT; unknown function, 46.1 1.5E+02 0.0052 25.8 22.1 48 187-237 168-225 (357)
344 2w18_A PALB2, fancn, partner a 45.8 1.7E+02 0.0058 26.4 22.1 145 116-271 192-345 (356)
345 3f6k_A Sortilin; protein sorti 43.5 1.3E+02 0.0045 29.8 10.2 47 120-166 59-109 (685)
346 1zgk_A Kelch-like ECH-associat 42.6 1.6E+02 0.0054 25.1 19.6 49 187-238 90-146 (308)
347 3ii7_A Kelch-like protein 7; p 41.8 1.6E+02 0.0055 24.9 25.7 107 115-239 54-179 (306)
348 2uvk_A YJHT; unknown function, 41.3 1.8E+02 0.0061 25.3 14.9 38 308-347 168-206 (357)
349 4asc_A Kelch repeat and BTB do 39.9 1.8E+02 0.006 24.9 19.3 49 187-238 67-126 (315)
350 2vpj_A Kelch-like protein 12; 39.6 1.7E+02 0.0059 24.6 20.7 135 186-359 77-229 (301)
351 2woz_A Kelch repeat and BTB do 35.9 2.1E+02 0.007 24.5 17.7 48 188-238 79-136 (318)
352 1xip_A Nucleoporin NUP159; bet 35.2 2.6E+02 0.0088 25.4 18.6 80 185-270 144-231 (388)
353 4aay_B AROB; oxidoreductase, r 32.2 1.8E+02 0.0062 23.1 7.7 15 151-165 147-161 (175)
354 3elq_A Arylsulfate sulfotransf 26.5 4.4E+02 0.015 25.4 16.8 20 309-328 377-396 (571)
355 2woz_A Kelch repeat and BTB do 26.0 3E+02 0.01 23.3 21.6 49 187-238 127-184 (318)
356 2zwa_A Leucine carboxyl methyl 23.1 5.4E+02 0.018 25.2 20.4 111 115-238 396-522 (695)
357 3hx6_A Type 4 fimbrial biogene 21.5 3E+02 0.01 26.6 8.2 53 186-239 222-285 (570)
358 2xn4_A Kelch-like protein 2; s 21.1 3.7E+02 0.013 22.5 20.4 49 187-238 77-133 (302)
359 2vpj_A Kelch-like protein 12; 20.0 3.8E+02 0.013 22.3 24.2 131 89-238 62-231 (301)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=100.00 E-value=6.7e-32 Score=249.90 Aligned_cols=259 Identities=25% Similarity=0.396 Sum_probs=208.4
Q ss_pred CCCCCcceEEEcCCCC-EEEEecCCeEEEEE-C-CeeeEE------------------------------E-ec-CCeEE
Q 018144 76 GSVNHPEDASMDKNGV-IYTATRDGWIKRLQ-D-GTWVNW------------------------------K-FI-DSHLI 120 (360)
Q Consensus 76 ~~~~~Pe~i~~d~~G~-l~v~~~~G~I~~~~-~-g~~~~~------------------------------~-~~-~g~L~ 120 (360)
+.+..||++++|++|+ +|+++.+|+|++++ + ++++.+ . .. +|+||
T Consensus 16 g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~ 95 (322)
T 2fp8_A 16 APSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLY 95 (322)
T ss_dssp CSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEE
T ss_pred CccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEE
Confidence 5578999999999998 88888899999998 4 333322 2 22 68999
Q ss_pred EEeCCCcEEEEc-CCC-eEEEeeccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCC
Q 018144 121 ICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN 197 (360)
Q Consensus 121 v~~~~~gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg 197 (360)
|++..+++++++ .++ ++.+.....+..+..|+++++|+ +|+|||+|...++..+.+...+.+....++|+++|++++
T Consensus 96 v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 96 IVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp EEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred EEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 999888999999 446 77776555555667899999999 999999998765655544444555566789999999888
Q ss_pred eEEEEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhH
Q 018144 198 ITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARR 277 (360)
Q Consensus 198 ~~~~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~ 277 (360)
+++.+..++..||||++++||+.+||+++..++|++|++++...+..+.+.+ .++ |+++++|++|+|||++...++.+
T Consensus 176 ~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~~~~~~ 253 (322)
T 2fp8_A 176 ETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSEELDGN 253 (322)
T ss_dssp EEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEEETTSS
T ss_pred EEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecCccccc
Confidence 8887777788999999999999999999988999999998766666666654 567 99999999999999997633211
Q ss_pred HHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCCCCeEEEE
Q 018144 278 MKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKV 357 (360)
Q Consensus 278 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~~~i~~~ 357 (360)
| .....+.|.+++++|+.+..+..++|..+..++++.+.+++||+++..+++|.++
T Consensus 254 -----------------~-------~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~ 309 (322)
T 2fp8_A 254 -----------------M-------HGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGIL 309 (322)
T ss_dssp -----------------T-------TSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEE
T ss_pred -----------------c-------cCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEE
Confidence 0 0112468999999999999999998876778888888899999999999999999
Q ss_pred eCC
Q 018144 358 QLS 360 (360)
Q Consensus 358 ~l~ 360 (360)
+++
T Consensus 310 ~~~ 312 (322)
T 2fp8_A 310 VYD 312 (322)
T ss_dssp EC-
T ss_pred ecc
Confidence 874
No 2
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.97 E-value=3.4e-28 Score=226.38 Aligned_cols=264 Identities=20% Similarity=0.297 Sum_probs=193.8
Q ss_pred ccceEecCCCCCCcceEEEcCCCCEEEEe-------------cCCeEEEEE-C---CeeeEEEe----------------
Q 018144 68 QDFIKVGEGSVNHPEDASMDKNGVIYTAT-------------RDGWIKRLQ-D---GTWVNWKF---------------- 114 (360)
Q Consensus 68 ~~~~~~~~~~~~~Pe~i~~d~~G~l~v~~-------------~~G~I~~~~-~---g~~~~~~~---------------- 114 (360)
.+++.|. +...+||+|+++++|.+|+++ .+|.|++++ + ++.+.+..
T Consensus 40 ~~C~~i~-~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~ 118 (355)
T 3sre_A 40 PNCNLVK-GIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGIS 118 (355)
T ss_dssp SCEEECT-TCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEE
T ss_pred CCCEEeC-CCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeE
Confidence 3566674 445799999999999999997 689999999 4 23222211
Q ss_pred ----cCC--eEEEEeCCC-----cEEEEcCCC-eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccc-eeccc
Q 018144 115 ----IDS--HLIICDNAN-----GLHKVSEDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEY-CLDIL 181 (360)
Q Consensus 115 ----~~g--~L~v~~~~~-----gl~~~~~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~-~~~~~ 181 (360)
.+| +|||+++.. ++++++.++ ...+.....+.+++.||+++++++|.+|+|+..+ |....+ ..+.+
T Consensus 119 ~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~-ftd~~~~~~e~~ 197 (355)
T 3sre_A 119 TFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHY-FIDPYLKSWEMH 197 (355)
T ss_dssp EEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCS-CSSHHHHHHHHH
T ss_pred EEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcE-eCCcccccchhh
Confidence 123 599998774 377888555 5556666677888999999999999999998752 111100 11122
Q ss_pred ccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCC-cCcceeeeccCCCCCCceeEE
Q 018144 182 EGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGE-RKGKLETFAENLPGAPDNINL 260 (360)
Q Consensus 182 ~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~-~~~~~~~~~~~~~g~pd~i~~ 260 (360)
++.+.|+|++||+ ++++.+.+++.+||||+++||++.+||+++..++|++|+++.. +.+..+.+ ..++.|||+++
T Consensus 198 ~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~--~~~g~PDGi~v 273 (355)
T 3sre_A 198 LGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL--SFDTLVDNISV 273 (355)
T ss_dssp TTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--ECSSEEEEEEE
T ss_pred ccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE--eCCCCCceEEE
Confidence 3456789999998 4677788889999999999999999999999999999998742 34455566 35789999999
Q ss_pred cC-CCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEEC----CCCcEEEEEeCCCCCccccee
Q 018144 261 AP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA----EDGTIIRNLVDPTGQLMSFVT 335 (360)
Q Consensus 261 d~-~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~----~~g~~~~~~~~~~g~~~~~~t 335 (360)
|. +|++|++....... +..--|. ......|.++. +++++.+.|.+ +|..+...|
T Consensus 274 D~e~G~lwva~~~~g~~-------------v~~~~P~-------~~~~s~v~rI~~~~~~~~~v~~v~~d-dG~~l~~~T 332 (355)
T 3sre_A 274 DPVTGDLWVGCHPNGMR-------------IFFYDAE-------NPPGSEVLRIQDILSEEPKVTVVYAE-NGTVLQGST 332 (355)
T ss_dssp CTTTCCEEEEEESCHHH-------------HHSCCTT-------SCCCEEEEEEECTTSSSCEEEEEEEE-CSSSCCSEE
T ss_pred eCCCCcEEEEecCCceE-------------EEEECCC-------CCCCCEEEEEEccCCCCcEEEEEEEc-CCCEEEeeE
Confidence 99 59999987532111 1111121 11245778886 47888889988 898899999
Q ss_pred eEEEECCEEEEEeCCCCeEEEEeC
Q 018144 336 SGLQVDNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 336 ~~~~~~g~Lylgs~~~~~i~~~~l 359 (360)
.+.+.+|+||+|++..+ +..|+|
T Consensus 333 ~a~~~~g~L~iGsv~~~-~l~c~~ 355 (355)
T 3sre_A 333 VAAVYKGKLLIGTVFHK-ALYCDL 355 (355)
T ss_dssp EEEEETTEEEEEESSSC-EEEEEC
T ss_pred EEEEECCEEEEEEcCCC-ceeccC
Confidence 99999999999999888 666664
No 3
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.94 E-value=4.4e-24 Score=195.75 Aligned_cols=243 Identities=16% Similarity=0.240 Sum_probs=182.4
Q ss_pred ceEecCCCCCCcceEEEcCCCC-EEEEe-cCCeEEEEE-CCeeeEEE-----------ecCCeEEEEeCC-CcEEEEcCC
Q 018144 70 FIKVGEGSVNHPEDASMDKNGV-IYTAT-RDGWIKRLQ-DGTWVNWK-----------FIDSHLIICDNA-NGLHKVSED 134 (360)
Q Consensus 70 ~~~~~~~~~~~Pe~i~~d~~G~-l~v~~-~~G~I~~~~-~g~~~~~~-----------~~~g~L~v~~~~-~gl~~~~~~ 134 (360)
.+++..+ +.-+|+.+++++|. ||+.+ .+++|++++ +|+.+.+. ..+|+||+++.. .+|.+++.+
T Consensus 37 ~~~l~~~-~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 37 LLTLYDQ-ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp CEEEECC-CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred eEEEecC-CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 3556655 57899999999887 55555 889999999 77654432 246889999876 689999966
Q ss_pred C-eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCcc-ce-ecccccCCccEEEEEcCCCCeEEEEeCCCcCcce
Q 018144 135 G-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHE-YC-LDILEGKPHGQLLKYDPSSNITTLVADGFYFANG 211 (360)
Q Consensus 135 g-~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~-~~-~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~png 211 (360)
| ++.+.....+..++.|++++++++|++||||+. |+... +. .........++|+++|+++++++.+. .+..|||
T Consensus 116 g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~--~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~g 192 (305)
T 3dr2_A 116 GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPP--FGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNG 192 (305)
T ss_dssp SCEEEEECEETTEECSCCCCEEECTTSCEEEECCS--GGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEE
T ss_pred CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcC--CCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcc
Confidence 8 777766556666778999999999999999864 11100 00 00001123468999999888888777 7889999
Q ss_pred EEEecCCCEEEEEeCCC-----CEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchh
Q 018144 212 VALSRDEDYVVVCESWK-----FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKL 286 (360)
Q Consensus 212 ia~~~dg~~l~v~~t~~-----~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~ 286 (360)
+++++|++.||++++.. ++|++|++++......+.+.+...+.|+++++|++|+||+++..
T Consensus 193 l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~-------------- 258 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT-------------- 258 (305)
T ss_dssp EEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS--------------
T ss_pred eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC--------------
Confidence 99999999999999863 78999998754444445555445678999999999999999843
Q ss_pred HHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEE--ECCEEEEEeCCCCeEEEEeC
Q 018144 287 IKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQ--VDNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 287 ~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~--~~g~Lylgs~~~~~i~~~~l 359 (360)
+|.+++++|+.+..+..+.+ ++.+.+ ++++||+++. +.|.++++
T Consensus 259 ----------------------gv~~~~~~g~~~~~~~~~~~-----~~~~~f~~d~~~L~it~~--~~l~~~~~ 304 (305)
T 3dr2_A 259 ----------------------GVCVFDSDGQLLGHIPTPGT-----ASNCTFDQAQQRLFITGG--PCLWMLPL 304 (305)
T ss_dssp ----------------------EEEEECTTSCEEEEEECSSC-----CCEEEECTTSCEEEEEET--TEEEEEEC
T ss_pred ----------------------cEEEECCCCCEEEEEECCCc-----eeEEEEeCCCCEEEEEcC--CeEEEEEC
Confidence 79999999999999887653 444555 3478999985 57877765
No 4
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.92 E-value=3.3e-22 Score=181.98 Aligned_cols=241 Identities=19% Similarity=0.256 Sum_probs=176.2
Q ss_pred eEecCCCCCCcceEEEcCCCC-EE-EEecCCeEEEEE-CCeeeEEE-----------ecCCeEEEEeCC-CcEEEEc-CC
Q 018144 71 IKVGEGSVNHPEDASMDKNGV-IY-TATRDGWIKRLQ-DGTWVNWK-----------FIDSHLIICDNA-NGLHKVS-ED 134 (360)
Q Consensus 71 ~~~~~~~~~~Pe~i~~d~~G~-l~-v~~~~G~I~~~~-~g~~~~~~-----------~~~g~L~v~~~~-~gl~~~~-~~ 134 (360)
+.+..+ +..||++++|++|. || ++..+++|++++ ++..+.+. ..+|+||+++.. .++.+++ .+
T Consensus 21 ~~l~~~-~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~ 99 (296)
T 3e5z_A 21 RRLADG-FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPG 99 (296)
T ss_dssp EEEECC-CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTT
T ss_pred EEEecC-CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCC
Confidence 445544 68899999999997 55 555889999999 44343332 247889999976 6899999 58
Q ss_pred C-eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCC-CCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceE
Q 018144 135 G-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKY-LPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGV 212 (360)
Q Consensus 135 g-~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~-~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngi 212 (360)
| ++.+.....+.....++++++|++|++|+||+.... ...... ........++|++++++ +++..+...+..|+|+
T Consensus 100 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~-~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi 177 (296)
T 3e5z_A 100 GEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGY-GGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGL 177 (296)
T ss_dssp CCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSS-CCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEE
T ss_pred CcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccc-cccccCCCcEEEEECCC-CCEEEeecCCCCCccE
Confidence 8 776654444555668999999999999999863100 000000 00001124689999998 8887777788899999
Q ss_pred EEecCCCEEEEEeCCCCEEEEEEecC-CcC-cceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHH
Q 018144 213 ALSRDEDYVVVCESWKFRCRKYWLKG-ERK-GKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHV 290 (360)
Q Consensus 213 a~~~dg~~l~v~~t~~~~i~~~~~~g-~~~-~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~ 290 (360)
++++||+.+ ++++..++|++|+++. .+. .....+ ....+.|+++++|++|++|+++ .
T Consensus 178 ~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~-~------------------ 236 (296)
T 3e5z_A 178 AFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA-G------------------ 236 (296)
T ss_dssp EECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE-T------------------
T ss_pred EECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc-C------------------
Confidence 999999977 9999889999999862 233 334455 4456689999999999999999 4
Q ss_pred HHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEE--C-CEEEEEeCCCCeEEEEeC
Q 018144 291 LAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV--D-NHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~--~-g~Lylgs~~~~~i~~~~l 359 (360)
++|.+++++|+.+..+..+.+ ++++.+. + +.||+++. +.|.++++
T Consensus 237 -----------------~~v~~~~~~g~~~~~~~~~~~-----~~~~~f~~~d~~~L~v~t~--~~l~~~~~ 284 (296)
T 3e5z_A 237 -----------------DGVHVLTPDGDELGRVLTPQT-----TSNLCFGGPEGRTLYMTVS--TEFWSIET 284 (296)
T ss_dssp -----------------TEEEEECTTSCEEEEEECSSC-----CCEEEEESTTSCEEEEEET--TEEEEEEC
T ss_pred -----------------CeEEEECCCCCEEEEEECCCC-----ceeEEEECCCCCEEEEEcC--CeEEEEEc
Confidence 489999999999988887654 4555553 3 58999985 57888875
No 5
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.91 E-value=3.3e-22 Score=182.63 Aligned_cols=235 Identities=13% Similarity=0.138 Sum_probs=173.6
Q ss_pred eEecCCCCCCcceEEEcC-CCCEEEEe-cCCeEEEEE--CCeeeEE---------E-ecCCeEEEEeCCCcEEEEc-CCC
Q 018144 71 IKVGEGSVNHPEDASMDK-NGVIYTAT-RDGWIKRLQ--DGTWVNW---------K-FIDSHLIICDNANGLHKVS-EDG 135 (360)
Q Consensus 71 ~~~~~~~~~~Pe~i~~d~-~G~l~v~~-~~G~I~~~~--~g~~~~~---------~-~~~g~L~v~~~~~gl~~~~-~~g 135 (360)
+.+......-+|+.++++ ++.||+.+ .+++|++++ +++...+ . ..+|+||++. ..++++++ .++
T Consensus 5 ~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g 83 (297)
T 3g4e_A 5 ECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVATI-GTKFCALNWKEQ 83 (297)
T ss_dssp EEEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTT
T ss_pred EEEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEEE-CCeEEEEECCCC
Confidence 334444467899999997 67888888 788999999 4443322 1 2467899987 67999999 677
Q ss_pred -eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEE
Q 018144 136 -VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVAL 214 (360)
Q Consensus 136 -~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~ 214 (360)
++.+.....+.....++++++|++|++|+++....... .......++|++++++ ++...+...+..|||+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~------~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~ 156 (297)
T 3g4e_A 84 SAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAP------AVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDW 156 (297)
T ss_dssp EEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBT------TBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEE
T ss_pred cEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCccccc------ccccCCCcEEEEEECC-CCEEEEeeccccccceEE
Confidence 77765544444456799999999999999875421000 0011245789999986 667666677889999999
Q ss_pred ecCCCEEEEEeCCCCEEEEEEec--CCcCcceeeeccC--CCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHH
Q 018144 215 SRDEDYVVVCESWKFRCRKYWLK--GERKGKLETFAEN--LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHV 290 (360)
Q Consensus 215 ~~dg~~l~v~~t~~~~i~~~~~~--g~~~~~~~~~~~~--~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~ 290 (360)
++|++.+|++++..++|++|+++ .......+.+.+. ..+.|+++++|++|+||++...
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~------------------ 218 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN------------------ 218 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET------------------
T ss_pred cCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC------------------
Confidence 99999999999988999999974 2233333444322 2357999999999999999986
Q ss_pred HHhCCccccccccCCCceEEEEECCC-CcEEEEEeCCCCCcccceeeEEEEC---CEEEEEeCCC
Q 018144 291 LAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQVD---NHLYVISLTS 351 (360)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~g~~~~~~t~~~~~~---g~Lylgs~~~ 351 (360)
.+.|.+++++ |+.+..+..+.. .++++.+.+ ++||+++...
T Consensus 219 ----------------~~~v~~~d~~tG~~~~~i~~p~~----~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 219 ----------------GGRVIRLDPVTGKRLQTVKLPVD----KTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp ----------------TTEEEEECTTTCCEEEEEECSSS----BEEEEEEESGGGCEEEEEEBCT
T ss_pred ----------------CCEEEEEcCCCceEEEEEECCCC----CceEEEEeCCCCCEEEEEcCCc
Confidence 3579999997 999988887643 477777752 6899998754
No 6
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.90 E-value=1.3e-21 Score=178.76 Aligned_cols=248 Identities=21% Similarity=0.291 Sum_probs=178.2
Q ss_pred eEecCCCCCCcceEEEcCCCCEEEE-------e-cCCeEEEEE--CCeeeEEE----------------ecC-CeEEEEe
Q 018144 71 IKVGEGSVNHPEDASMDKNGVIYTA-------T-RDGWIKRLQ--DGTWVNWK----------------FID-SHLIICD 123 (360)
Q Consensus 71 ~~~~~~~~~~Pe~i~~d~~G~l~v~-------~-~~G~I~~~~--~g~~~~~~----------------~~~-g~L~v~~ 123 (360)
+.+..+ +..|+++++|++|.||++ + .+++|++++ +|+...+. ..+ |+|||++
T Consensus 11 ~~~~~~-~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~ 89 (314)
T 1pjx_A 11 TKVTED-IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD 89 (314)
T ss_dssp EEEECC-CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE
T ss_pred hhhhcc-CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE
Confidence 445544 789999999999999999 4 788999998 56543321 135 8999999
Q ss_pred CCCcEEEEcCCC-eEEE-eeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE
Q 018144 124 NANGLHKVSEDG-VENF-LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL 201 (360)
Q Consensus 124 ~~~gl~~~~~~g-~~~l-~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~ 201 (360)
...++++++.+| ++.+ .....+.....++++++|++|++|+++.........+. .......++|+++|++ ++.+.
T Consensus 90 ~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~-g~~~~ 166 (314)
T 1pjx_A 90 MRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYT--RSMQEKFGSIYCFTTD-GQMIQ 166 (314)
T ss_dssp TTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCC--BTTSSSCEEEEEECTT-SCEEE
T ss_pred CCCCEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCccccccccc--ccccCCCCeEEEECCC-CCEEE
Confidence 878999999438 6655 43323334467999999999999999864210000000 0012234789999987 77776
Q ss_pred EeCCCcCcceEEEe----cCCCEEEEEeCCCCEEEEEEecC-CcCcceeeeccC--CC-CCCceeEEcCCCCEEEEEecC
Q 018144 202 VADGFYFANGVALS----RDEDYVVVCESWKFRCRKYWLKG-ERKGKLETFAEN--LP-GAPDNINLAPDGTFWIAIIKL 273 (360)
Q Consensus 202 ~~~~l~~pngia~~----~dg~~l~v~~t~~~~i~~~~~~g-~~~~~~~~~~~~--~~-g~pd~i~~d~~G~lwva~~~~ 273 (360)
+...+..|++++++ +||+.+|++++..++|++|+.++ .+....+.+... .. +.|+++++|++|++|++...
T Consensus 167 ~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~- 245 (314)
T 1pjx_A 167 VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG- 245 (314)
T ss_dssp EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET-
T ss_pred eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC-
Confidence 66667789999999 99988999998889999999752 222222233221 11 56899999999999999875
Q ss_pred chhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEeCCCCCcccceeeEEEE-CC-EEEEEeCC
Q 018144 274 DARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV-DN-HLYVISLT 350 (360)
Q Consensus 274 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~g~~~~~~t~~~~~-~g-~Lylgs~~ 350 (360)
.+.|.+++++ |+.+..+..+. ..++++..+ +| .||+++..
T Consensus 246 ---------------------------------~~~i~~~d~~~g~~~~~~~~~~----~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 246 ---------------------------------SSHIEVFGPDGGQPKMRIRCPF----EKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp ---------------------------------TTEEEEECTTCBSCSEEEECSS----SCEEEEEECTTSSEEEEEETT
T ss_pred ---------------------------------CCEEEEEcCCCCcEeEEEeCCC----CCceeEEECCCCCEEEEEeCC
Confidence 3589999998 88777776543 356777765 45 49999999
Q ss_pred CCeEEEEeCC
Q 018144 351 SNFIGKVQLS 360 (360)
Q Consensus 351 ~~~i~~~~l~ 360 (360)
++.|.+++++
T Consensus 289 ~~~l~~~~~~ 298 (314)
T 1pjx_A 289 NNAVWKFEWQ 298 (314)
T ss_dssp TTEEEEEECS
T ss_pred CCeEEEEeCC
Confidence 8999998763
No 7
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.87 E-value=1.3e-19 Score=166.18 Aligned_cols=213 Identities=19% Similarity=0.229 Sum_probs=158.5
Q ss_pred CCcceEEEcCCCCEEEEe-cCCeEEEEE-CCeeeEE----------E-ecCCeEEEEeCCC-c--EEEEc-CCC-eEEEe
Q 018144 79 NHPEDASMDKNGVIYTAT-RDGWIKRLQ-DGTWVNW----------K-FIDSHLIICDNAN-G--LHKVS-EDG-VENFL 140 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v~~-~~G~I~~~~-~g~~~~~----------~-~~~g~L~v~~~~~-g--l~~~~-~~g-~~~l~ 140 (360)
..||++++|++|+||+++ .+++|++++ +++...+ . ..+|+|||++... + +++++ ++| ++.+.
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~ 111 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLL 111 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEE
Confidence 689999999999999999 789999999 6654322 1 2468899999652 3 88888 777 76664
Q ss_pred eccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEE-----------eCCCcCc
Q 018144 141 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-----------ADGFYFA 209 (360)
Q Consensus 141 ~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~-----------~~~l~~p 209 (360)
.... ..++++++..+++.+|++|.. .++|+++|+.+++.+.. ...+..|
T Consensus 112 ~~~~---~~~~~g~~~~~~~~~~v~d~~-----------------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~p 171 (306)
T 2p4o_A 112 TLPD---AIFLNGITPLSDTQYLTADSY-----------------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAA 171 (306)
T ss_dssp ECTT---CSCEEEEEESSSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSE
T ss_pred eCCC---ccccCcccccCCCcEEEEECC-----------------CCeEEEEeCCCCcEeEEEECCccccccccCCCCcC
Confidence 4321 346788888888899998753 47899999876543322 1245689
Q ss_pred ceEEEecCCCEEEEEeCCCCEEEEEEecC-CcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHH
Q 018144 210 NGVALSRDEDYVVVCESWKFRCRKYWLKG-ERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIK 288 (360)
Q Consensus 210 ngia~~~dg~~l~v~~t~~~~i~~~~~~g-~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r 288 (360)
||| ++|++.||++++..++|++|++++ .+.+..+.+.+. ..|++|++|++|++||+...
T Consensus 172 ngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~--~~P~gi~vd~dG~l~va~~~---------------- 231 (306)
T 2p4o_A 172 NGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ--TNIDDFAFDVEGNLYGATHI---------------- 231 (306)
T ss_dssp EEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES--CCCSSEEEBTTCCEEEECBT----------------
T ss_pred CCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc--CCCCCeEECCCCCEEEEeCC----------------
Confidence 998 888889999999999999999975 334445555432 46999999999999999986
Q ss_pred HHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEE----C-CEEEEEeCCC
Q 018144 289 HVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV----D-NHLYVISLTS 351 (360)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~----~-g~Lylgs~~~ 351 (360)
.+.|.+++++|+.......+.+ ...++++... + ++||+++..+
T Consensus 232 ------------------~~~V~~~~~~G~~~~~~~~~~~--~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 232 ------------------YNSVVRIAPDRSTTIIAQAEQG--VIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp ------------------TCCEEEECTTCCEEEEECGGGT--CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred ------------------CCeEEEECCCCCEEEEeecccc--cCCceEEEEecccCCCCEEEEECCCC
Confidence 3689999999987543332222 3467888774 3 7999998753
No 8
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.86 E-value=3.6e-19 Score=164.70 Aligned_cols=231 Identities=18% Similarity=0.180 Sum_probs=169.3
Q ss_pred ceEecCCCCCCcceEEEcCC-CCEEEEe-cCCeEEEEE--CCeeeEEE----------ecCCeEEEEeCCCcEEEEc-CC
Q 018144 70 FIKVGEGSVNHPEDASMDKN-GVIYTAT-RDGWIKRLQ--DGTWVNWK----------FIDSHLIICDNANGLHKVS-ED 134 (360)
Q Consensus 70 ~~~~~~~~~~~Pe~i~~d~~-G~l~v~~-~~G~I~~~~--~g~~~~~~----------~~~g~L~v~~~~~gl~~~~-~~ 134 (360)
.+.+......-+|+.+++++ +.+|+.+ .+++|++++ +++...+. ..+|++|+++ ..|+++++ .+
T Consensus 40 ~~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~-~~gl~~~d~~~ 118 (326)
T 2ghs_A 40 GRVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIAS-DDGLFLRDTAT 118 (326)
T ss_dssp CEEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEE-TTEEEEEETTT
T ss_pred eEEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEE-CCCEEEEECCC
Confidence 45666655677999999985 6777776 788999999 45443221 3478899987 57899999 67
Q ss_pred C-eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEE
Q 018144 135 G-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVA 213 (360)
Q Consensus 135 g-~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia 213 (360)
| ++.+.....+.....++++++|++|++|+++.... .....++|++++ +++++.+......+|+++
T Consensus 119 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~-----------~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~ 185 (326)
T 2ghs_A 119 GVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRK-----------AETGAGSIYHVA--KGKVTKLFADISIPNSIC 185 (326)
T ss_dssp CCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETT-----------CCTTCEEEEEEE--TTEEEEEEEEESSEEEEE
T ss_pred CcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCc-----------CCCCceEEEEEe--CCcEEEeeCCCcccCCeE
Confidence 7 76664332223345789999999999999864310 012357899999 488776666667899999
Q ss_pred EecCCCEEEEEeCCCCEEEEEEec--CC-cCcceeeecc--CCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHH
Q 018144 214 LSRDEDYVVVCESWKFRCRKYWLK--GE-RKGKLETFAE--NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIK 288 (360)
Q Consensus 214 ~~~dg~~l~v~~t~~~~i~~~~~~--g~-~~~~~~~~~~--~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r 288 (360)
+++||+.+|++++..++|++|+.+ .. .....+.+.. ...+.|+++++|++|++|+++..
T Consensus 186 ~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~---------------- 249 (326)
T 2ghs_A 186 FSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWG---------------- 249 (326)
T ss_dssp ECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEET----------------
T ss_pred EcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeC----------------
Confidence 999999999999988899999985 32 3332333322 13457999999999999999875
Q ss_pred HHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEE--C-CEEEEEeCCCC
Q 018144 289 HVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV--D-NHLYVISLTSN 352 (360)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~--~-g~Lylgs~~~~ 352 (360)
.++|.+++++|+.+..+..+.. .++++.+. + +.||+++....
T Consensus 250 ------------------~~~v~~~d~~g~~~~~i~~~~~----~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 250 ------------------EGAVDRYDTDGNHIARYEVPGK----QTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp ------------------TTEEEEECTTCCEEEEEECSCS----BEEEEEEESTTSCEEEEEEBCTT
T ss_pred ------------------CCEEEEECCCCCEEEEEECCCC----CcEEEEEecCCCCEEEEEecCCC
Confidence 2589999999998888876542 47777765 3 68999987664
No 9
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=4.2e-19 Score=160.26 Aligned_cols=222 Identities=14% Similarity=0.267 Sum_probs=164.4
Q ss_pred CCCCCcceEEEcCCCCEEEEe-cCCeEEEEE-CCeee-----------------EEEe--cCCeEEEEeC--CCcEEEEc
Q 018144 76 GSVNHPEDASMDKNGVIYTAT-RDGWIKRLQ-DGTWV-----------------NWKF--IDSHLIICDN--ANGLHKVS 132 (360)
Q Consensus 76 ~~~~~Pe~i~~d~~G~l~v~~-~~G~I~~~~-~g~~~-----------------~~~~--~~g~L~v~~~--~~gl~~~~ 132 (360)
+.+..|.++++|++|.+|+++ .+++|.+++ +|+.. .+.. .+|+|||++. ...+.+++
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 457899999999999999997 678999998 65321 1222 4788999985 56788888
Q ss_pred CCC--eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe--CCCcC
Q 018144 133 EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYF 208 (360)
Q Consensus 133 ~~g--~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~--~~l~~ 208 (360)
.+| .+.+. ......|++|+++++|++|+++.. .++|+++|++......+. ..+..
T Consensus 107 ~~g~~~~~~~----~~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~g~~~~~~~~~~~~~~ 165 (286)
T 1q7f_A 107 QYGQFVRKFG----ATILQHPRGVTVDNKGRIIVVECK-----------------VMRVIIFDQNGNVLHKFGCSKHLEF 165 (286)
T ss_dssp TTSCEEEEEC----TTTCSCEEEEEECTTSCEEEEETT-----------------TTEEEEECTTSCEEEEEECTTTCSS
T ss_pred CCCcEEEEec----CccCCCceEEEEeCCCCEEEEECC-----------------CCEEEEEcCCCCEEEEeCCCCccCC
Confidence 666 33331 122356899999999999998754 468999998744444443 34668
Q ss_pred cceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccC-CCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhH
Q 018144 209 ANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLI 287 (360)
Q Consensus 209 pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~-~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~ 287 (360)
|++++++++|+ +|++++..++|.+|+.++.. ...+... ....|.++++|++|++||+...
T Consensus 166 p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~---~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~--------------- 226 (286)
T 1q7f_A 166 PNGVVVNDKQE-IFISDNRAHCVKVFNYEGQY---LRQIGGEGITNYPIGVGINSNGEILIADNH--------------- 226 (286)
T ss_dssp EEEEEECSSSE-EEEEEGGGTEEEEEETTCCE---EEEESCTTTSCSEEEEEECTTCCEEEEECS---------------
T ss_pred cEEEEECCCCC-EEEEECCCCEEEEEcCCCCE---EEEEccCCccCCCcEEEECCCCCEEEEeCC---------------
Confidence 99999999986 99999888899999986642 2223211 1236899999999999999876
Q ss_pred HHHHHhCCccccccccCCCce-EEEEECCCCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCCeEEEEeC
Q 018144 288 KHVLAAYPKLFSQFITLGGGA-HLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 288 r~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~~~l 359 (360)
.+ .|.+++++|+.+..+....+ ...+.++..+ +|+||+++. ++.|.++++
T Consensus 227 -------------------~~~~i~~~~~~g~~~~~~~~~~~--~~~~~~i~~~~~g~l~vs~~-~~~v~v~~~ 278 (286)
T 1q7f_A 227 -------------------NNFNLTIFTQDGQLISALESKVK--HAQCFDVALMDDGSVVLASK-DYRLYIYRY 278 (286)
T ss_dssp -------------------SSCEEEEECTTSCEEEEEEESSC--CSCEEEEEEETTTEEEEEET-TTEEEEEEC
T ss_pred -------------------CCEEEEEECCCCCEEEEEcccCC--CCcceeEEECCCCcEEEECC-CCeEEEEEc
Confidence 23 89999999998888765332 2345667666 599999974 789988875
No 10
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.86 E-value=1.8e-19 Score=173.28 Aligned_cols=227 Identities=11% Similarity=0.117 Sum_probs=167.3
Q ss_pred CCCCcceEEEcC---CCCEEEEecCCeEEEEE--CCeeeEEE-----------ecCCeEEEEeCC-----CcEEEEcCCC
Q 018144 77 SVNHPEDASMDK---NGVIYTATRDGWIKRLQ--DGTWVNWK-----------FIDSHLIICDNA-----NGLHKVSEDG 135 (360)
Q Consensus 77 ~~~~Pe~i~~d~---~G~l~v~~~~G~I~~~~--~g~~~~~~-----------~~~g~L~v~~~~-----~gl~~~~~~g 135 (360)
.+..|++|++|+ +|+||+++..++|++++ +|++..+. ..+|+|||++.. .+++.++.++
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG
T ss_pred ccCCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC
Confidence 578999999997 49999999658999999 66655432 235679999973 3677777333
Q ss_pred -eE---EEeeccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeE-EEEeC--CCc
Q 018144 136 -VE---NFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT-TLVAD--GFY 207 (360)
Q Consensus 136 -~~---~l~~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~-~~~~~--~l~ 207 (360)
+. .+. .+..|+++++|+ +|+|||+|.. .++|+++|++++++ +.+.. ...
T Consensus 217 ~~~~~~~~~------~~~~P~giavd~~~G~lyv~d~~-----------------~~~V~~~d~~~g~~~~~~~~~~~~~ 273 (433)
T 4hw6_A 217 GFTERLSLC------NARGAKTCAVHPQNGKIYYTRYH-----------------HAMISSYDPATGTLTEEEVMMDTKG 273 (433)
T ss_dssp TTCCEEEEE------ECSSBCCCEECTTTCCEEECBTT-----------------CSEEEEECTTTCCEEEEEEECSCCS
T ss_pred Ceecccccc------ccCCCCEEEEeCCCCeEEEEECC-----------------CCEEEEEECCCCeEEEEEeccCCCC
Confidence 22 221 246799999999 8999998754 56899999987876 33322 234
Q ss_pred CcceEEEecCCCEEEEEeCCCCEEEEEEecCC--cCcceeeeccC--CC------------CCCceeEE---------cC
Q 018144 208 FANGVALSRDEDYVVVCESWKFRCRKYWLKGE--RKGKLETFAEN--LP------------GAPDNINL---------AP 262 (360)
Q Consensus 208 ~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~--~~~~~~~~~~~--~~------------g~pd~i~~---------d~ 262 (360)
.+++++++++|+.||++++.+++|++++.++. .......+... .. ..|.++++ |.
T Consensus 274 ~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~ 353 (433)
T 4hw6_A 274 SNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEED 353 (433)
T ss_dssp SCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSC
T ss_pred CcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCC
Confidence 56689999999999999999999999998642 22222222211 11 24888999 99
Q ss_pred CCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCC--------CC-----C
Q 018144 263 DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDP--------TG-----Q 329 (360)
Q Consensus 263 ~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~--------~g-----~ 329 (360)
+|+|||+... ...|.+++++|.+....... +| .
T Consensus 354 ~g~lyvaD~~----------------------------------n~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~ 399 (433)
T 4hw6_A 354 EYDFYFCDRD----------------------------------SHTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQA 399 (433)
T ss_dssp CEEEEEEETT----------------------------------TTEEEEECTTSEEEEEECCCTTCSSCCBCEETTTTC
T ss_pred CCcEEEEECC----------------------------------CCEEEEECCCCCEEEEEeCCCCCccccCCCcccccc
Confidence 9999999986 35899999999776655331 12 1
Q ss_pred cccceeeEEEE--CCEEEEEeCCCCeEEEEeCC
Q 018144 330 LMSFVTSGLQV--DNHLYVISLTSNFIGKVQLS 360 (360)
Q Consensus 330 ~~~~~t~~~~~--~g~Lylgs~~~~~i~~~~l~ 360 (360)
.+..+.++..+ +|+||++...+++|.++.++
T Consensus 400 ~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 400 LFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp BCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 35678888888 59999999999999999875
No 11
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.84 E-value=9.5e-19 Score=156.21 Aligned_cols=219 Identities=16% Similarity=0.193 Sum_probs=158.5
Q ss_pred CcceEEEcCCCCEEE-Ee-cCCeEEEEE-CC-eeeE-----------EE-ecCCeEEEEeCCCcEEEEcCCC--eEEEee
Q 018144 80 HPEDASMDKNGVIYT-AT-RDGWIKRLQ-DG-TWVN-----------WK-FIDSHLIICDNANGLHKVSEDG--VENFLS 141 (360)
Q Consensus 80 ~Pe~i~~d~~G~l~v-~~-~~G~I~~~~-~g-~~~~-----------~~-~~~g~L~v~~~~~gl~~~~~~g--~~~l~~ 141 (360)
.|++|++|++|+||+ ++ .+++|++++ ++ .... +. ..+|+|||++..+++++++.++ ...+.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~- 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLP- 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECC-
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeee-
Confidence 999999999999999 85 678999998 33 2111 11 2367899999866798998544 43321
Q ss_pred ccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEE-eCCCcCcceEEEecCCCE
Q 018144 142 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDY 220 (360)
Q Consensus 142 ~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~-~~~l~~pngia~~~dg~~ 220 (360)
...+..|++|+++++|++|++|.. .++|++++..+...... ...+..|++++++++|+
T Consensus 104 ---~~~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~- 162 (270)
T 1rwi_B 104 ---FDGLNYPEGLAVDTQGAVYVADRG-----------------NNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN- 162 (270)
T ss_dssp ---CCSCSSEEEEEECTTCCEEEEEGG-----------------GTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-
T ss_pred ---cCCcCCCcceEECCCCCEEEEECC-----------------CCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-
Confidence 112356899999999999998753 46899998765443332 23456899999999997
Q ss_pred EEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccc
Q 018144 221 VVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQ 300 (360)
Q Consensus 221 l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 300 (360)
+|+++...++|.+|+.++... ..........|.+|++|++|++|++...
T Consensus 163 l~v~~~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~i~~d~~g~l~v~~~~---------------------------- 211 (270)
T 1rwi_B 163 VYVTDTDNNRVVKLEAESNNQ---VVLPFTDITAPWGIAVDEAGTVYVTEHN---------------------------- 211 (270)
T ss_dssp EEEEEGGGTEEEEECTTTCCE---EECCCSSCCSEEEEEECTTCCEEEEETT----------------------------
T ss_pred EEEEECCCCEEEEEecCCCce---EeecccCCCCceEEEECCCCCEEEEECC----------------------------
Confidence 999998888999999865421 1111111146899999999999999875
Q ss_pred cccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCCeEEEEeCC
Q 018144 301 FITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQLS 360 (360)
Q Consensus 301 ~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~~~l~ 360 (360)
.+.|.++++++........ .+ ...+.++..+ +|+||+++..+++|.+++++
T Consensus 212 ------~~~v~~~~~~~~~~~~~~~-~~--~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 212 ------TNQVVKLLAGSTTSTVLPF-TG--LNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp ------TSCEEEECTTCSCCEECCC-CS--CSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred ------CCcEEEEcCCCCcceeecc-CC--CCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 3579999998875544322 22 3467788776 58999999999999999864
No 12
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.84 E-value=5e-18 Score=162.06 Aligned_cols=227 Identities=13% Similarity=0.086 Sum_probs=164.7
Q ss_pred CCCCcceEEEcCCCCEEEEe-cCCeEEEEE-C-CeeeEEEe-----------cCCeEEEEeCCC--cEEEEc-CCC-e-E
Q 018144 77 SVNHPEDASMDKNGVIYTAT-RDGWIKRLQ-D-GTWVNWKF-----------IDSHLIICDNAN--GLHKVS-EDG-V-E 137 (360)
Q Consensus 77 ~~~~Pe~i~~d~~G~l~v~~-~~G~I~~~~-~-g~~~~~~~-----------~~g~L~v~~~~~--gl~~~~-~~g-~-~ 137 (360)
.+..|.+|++|++|+||+++ .+++|.+++ + +....+.. .++.||+++... .++.++ ..+ . .
T Consensus 129 ~~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 129 KFKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred ccCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 47899999999999999999 568999999 4 55554432 134688888754 688888 444 3 2
Q ss_pred EEeeccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEE----eCCC--cCcc
Q 018144 138 NFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV----ADGF--YFAN 210 (360)
Q Consensus 138 ~l~~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~----~~~l--~~pn 210 (360)
.+.. ........|+++++++ +|+||++|. .++|+++|++++....+ ..+. ..|.
T Consensus 209 ~~g~-~~~~~~~~p~~iav~p~~g~lyv~d~------------------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~ 269 (409)
T 3hrp_A 209 RIGQ-LGSTFSGKIGAVALDETEEWLYFVDS------------------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPG 269 (409)
T ss_dssp EEEE-CCTTSCSCCCBCEECTTSSEEEEECT------------------TCEEEEEETTTCCEEEEEECCCCSCCCCSSC
T ss_pred Eeee-ccchhcCCcEEEEEeCCCCeEEEEEC------------------CCcEEEEECCCCCEEEEecccccCCCCCCcc
Confidence 3311 1111246789999999 789999753 36899999987776554 2222 2244
Q ss_pred -eEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCC--------------CCCCceeEEcCCCCEEEEEe-cCc
Q 018144 211 -GVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENL--------------PGAPDNINLAPDGTFWIAII-KLD 274 (360)
Q Consensus 211 -gia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~--------------~g~pd~i~~d~~G~lwva~~-~~~ 274 (360)
++++++++..||++++..++|++++.++. ...+.... -..|.+|++|++|+|||+.. .
T Consensus 270 ~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~-- 343 (409)
T 3hrp_A 270 PYLIYYFVDSNFYMSDQNLSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK-- 343 (409)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT--
T ss_pred ccEEEeCCCCEEEEEeCCCCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC--
Confidence 99999976689999999999999998763 11221110 12599999999999999987 6
Q ss_pred hhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEEC-CCCcEEEEEeCC------CC----CcccceeeEEEEC-C
Q 018144 275 ARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDP------TG----QLMSFVTSGLQVD-N 342 (360)
Q Consensus 275 ~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~------~g----~~~~~~t~~~~~~-g 342 (360)
...|.+++ ++|++......+ +| ..+..+.++..+. |
T Consensus 344 --------------------------------~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g 391 (409)
T 3hrp_A 344 --------------------------------GYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEG 391 (409)
T ss_dssp --------------------------------TCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSS
T ss_pred --------------------------------CCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCC
Confidence 36899999 788766554431 11 1256788888874 9
Q ss_pred EEEEEeCCCCeEEEEeCC
Q 018144 343 HLYVISLTSNFIGKVQLS 360 (360)
Q Consensus 343 ~Lylgs~~~~~i~~~~l~ 360 (360)
+||++...+++|.++.+|
T Consensus 392 ~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 392 GYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EEEEEESTTCEEEEEEEC
T ss_pred CEEEEECCCCeEEEEEeC
Confidence 999999999999999875
No 13
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.84 E-value=7.9e-18 Score=151.98 Aligned_cols=220 Identities=16% Similarity=0.226 Sum_probs=164.1
Q ss_pred CCCCcceEEEcCCCCEEEEe-cCCeEEEEE-CCeeeEEE-------------ecCCeEEEEeCC-CcEEEEcCCC-eEEE
Q 018144 77 SVNHPEDASMDKNGVIYTAT-RDGWIKRLQ-DGTWVNWK-------------FIDSHLIICDNA-NGLHKVSEDG-VENF 139 (360)
Q Consensus 77 ~~~~Pe~i~~d~~G~l~v~~-~~G~I~~~~-~g~~~~~~-------------~~~g~L~v~~~~-~gl~~~~~~g-~~~l 139 (360)
....|++|++|++|.||+++ .+++|.+++ ++++..+. ..+|+||+++.. +++++++.+| ++.+
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~ 97 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFTEY 97 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCCCCeEEe
Confidence 36899999999999999999 578999998 65544321 246889999875 5688998557 6544
Q ss_pred eeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe--CCCcCcceEEEecC
Q 018144 140 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYFANGVALSRD 217 (360)
Q Consensus 140 ~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~--~~l~~pngia~~~d 217 (360)
..... ...|++++++++|++|+++.. .++|+++|++ ++...+. .....|++++++++
T Consensus 98 ~~~~~---~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 98 PLPQP---DSGPYGITEGLNGDIWFTQLN-----------------GDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSD 156 (300)
T ss_dssp ECSST---TCCEEEEEECSTTCEEEEETT-----------------TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT
T ss_pred cCCCC---CCCCccceECCCCCEEEEccC-----------------CCeEEEECCC-CCEEEccCCCCCCCceeEEECCC
Confidence 32211 246899999999999998643 4689999998 7765442 24568999999999
Q ss_pred CCEEEEEeCCCCEEEEEEecCCcCcceeeec-cCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCc
Q 018144 218 EDYVVVCESWKFRCRKYWLKGERKGKLETFA-ENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 296 (360)
Q Consensus 218 g~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~-~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~ 296 (360)
|+ +|+++...++|++|+.++. ...+. ......|.++++|++|++|++...
T Consensus 157 g~-l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~------------------------ 207 (300)
T 2qc5_A 157 NA-LWFTENQNNSIGRITNTGK----LEEYPLPTNAAAPVGITSGNDGALWFVEIM------------------------ 207 (300)
T ss_dssp SS-EEEEETTTTEEEEECTTCC----EEEEECSSTTCCEEEEEECTTSSEEEEETT------------------------
T ss_pred CC-EEEEecCCCeEEEECCCCc----EEEeeCCCCCCCcceEEECCCCCEEEEccC------------------------
Confidence 98 9999988889999987442 22221 112236899999999999999875
Q ss_pred cccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCCeEEEEeC
Q 018144 297 LFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 297 ~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~~~l 359 (360)
.+.|.+++++|+... +..+.+ ...+.++..+ +|+||+++..++.|.+++.
T Consensus 208 ----------~~~i~~~~~~g~~~~-~~~~~~--~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 208 ----------GNKIGRITTTGEISE-YDIPTP--NARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp ----------TTEEEEECTTCCEEE-EECSST--TCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred ----------CCEEEEEcCCCcEEE-EECCCC--CCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 358999999887654 333322 3457778777 5899999999999998864
No 14
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.84 E-value=2.2e-18 Score=158.90 Aligned_cols=235 Identities=20% Similarity=0.249 Sum_probs=166.2
Q ss_pred CCCcceEEEcCCCCEEEEe-cCCeEEEEE--CCeeeEEE------------ecCCeEEEEeCCC-----cEEEEc-CCC-
Q 018144 78 VNHPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWK------------FIDSHLIICDNAN-----GLHKVS-EDG- 135 (360)
Q Consensus 78 ~~~Pe~i~~d~~G~l~v~~-~~G~I~~~~--~g~~~~~~------------~~~g~L~v~~~~~-----gl~~~~-~~g- 135 (360)
...|+++++|++|.||+++ .+++|++++ +++...+. ..+|+||+++... ++++++ .++
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~ 123 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN 123 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred CccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE
Confidence 5789999999999999865 788999998 45443321 2468899998654 899999 555
Q ss_pred eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEe
Q 018144 136 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALS 215 (360)
Q Consensus 136 ~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~ 215 (360)
++.+.... .....+++++++++|++|+++.... .....++|+++|+++++++.+......+++++++
T Consensus 124 ~~~~~~~~--~~~~~~~~i~~d~~g~l~v~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 190 (333)
T 2dg1_A 124 LQDIIEDL--STAYCIDDMVFDSKGGFYFTDFRGY-----------STNPLGGVYYVSPDFRTVTPIIQNISVANGIALS 190 (333)
T ss_dssp CEEEECSS--SSCCCEEEEEECTTSCEEEEECCCB-----------TTBCCEEEEEECTTSCCEEEEEEEESSEEEEEEC
T ss_pred EEEEEccC--ccCCcccceEECCCCCEEEEecccc-----------ccCCCceEEEEeCCCCEEEEeecCCCcccceEEC
Confidence 55332211 1124689999999999999875310 0112468999999877777665566779999999
Q ss_pred cCCCEEEEEeCCCCEEEEEEec--CCcCcce--eeeccC-CCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHH
Q 018144 216 RDEDYVVVCESWKFRCRKYWLK--GERKGKL--ETFAEN-LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHV 290 (360)
Q Consensus 216 ~dg~~l~v~~t~~~~i~~~~~~--g~~~~~~--~~~~~~-~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~ 290 (360)
+||+.+|++++..++|++|+.+ +...... ..+... ....|+++++|++|++|+++..
T Consensus 191 ~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~------------------ 252 (333)
T 2dg1_A 191 TDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG------------------ 252 (333)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET------------------
T ss_pred CCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC------------------
Confidence 9999999999878899999985 2222111 111111 1136899999999999999865
Q ss_pred HHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCC--cccceeeEEEE-C-CEEEEEeCCC-----CeEEEEeC
Q 018144 291 LAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQ--LMSFVTSGLQV-D-NHLYVISLTS-----NFIGKVQL 359 (360)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~--~~~~~t~~~~~-~-g~Lylgs~~~-----~~i~~~~l 359 (360)
.+.|.+++++|+.+..+..+... .+..++++... + ++||+++..+ ..|.++++
T Consensus 253 ----------------~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~ 314 (333)
T 2dg1_A 253 ----------------QGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 314 (333)
T ss_dssp ----------------TTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred ----------------CCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEec
Confidence 35899999999988888765320 01245666664 3 6899998774 36666654
No 15
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.83 E-value=8.6e-18 Score=151.74 Aligned_cols=217 Identities=14% Similarity=0.171 Sum_probs=160.5
Q ss_pred CCCcceEEEcCCCCEEEEec-CCeEEEEE-CCeeeEEE-------------ecCCeEEEEeCC-CcEEEEcCCC-eEEEe
Q 018144 78 VNHPEDASMDKNGVIYTATR-DGWIKRLQ-DGTWVNWK-------------FIDSHLIICDNA-NGLHKVSEDG-VENFL 140 (360)
Q Consensus 78 ~~~Pe~i~~d~~G~l~v~~~-~G~I~~~~-~g~~~~~~-------------~~~g~L~v~~~~-~gl~~~~~~g-~~~l~ 140 (360)
...|.+|++|++|++|+++. +++|++++ +|+...+. ..+|+||+++.. .++++++.+| +..+.
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~ 140 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYD 140 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEE
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEcc
Confidence 47899999999999999984 78899998 76544332 236889999874 5788998557 55442
Q ss_pred eccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe--CCCcCcceEEEecCC
Q 018144 141 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYFANGVALSRDE 218 (360)
Q Consensus 141 ~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~--~~l~~pngia~~~dg 218 (360)
.. .....|+++++|++|++|+++.. .++|+++|+ +++...+. .....|.+++++++|
T Consensus 141 ~~---~~~~~~~~i~~d~~g~l~v~~~~-----------------~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g 199 (300)
T 2qc5_A 141 LP---NKGSYPAFITLGSDNALWFTENQ-----------------NNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDG 199 (300)
T ss_dssp CS---STTCCEEEEEECTTSSEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS
T ss_pred CC---CCCCCceeEEECCCCCEEEEecC-----------------CCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCC
Confidence 11 12356899999999999998743 468999998 57665543 345679999999998
Q ss_pred CEEEEEeCCCCEEEEEEecCCcCcceeeec-cCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCcc
Q 018144 219 DYVVVCESWKFRCRKYWLKGERKGKLETFA-ENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 297 (360)
Q Consensus 219 ~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~-~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 297 (360)
+ +|+++...++|.+|+.++. ...+. ......|.++++|++|++|+++..
T Consensus 200 ~-l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~------------------------- 249 (300)
T 2qc5_A 200 A-LWFVEIMGNKIGRITTTGE----ISEYDIPTPNARPHAITAGKNSEIWFTEWG------------------------- 249 (300)
T ss_dssp S-EEEEETTTTEEEEECTTCC----EEEEECSSTTCCEEEEEECSTTCEEEEETT-------------------------
T ss_pred C-EEEEccCCCEEEEEcCCCc----EEEEECCCCCCCceEEEECCCCCEEEeccC-------------------------
Confidence 6 9999988889999987442 22221 112235889999999999999865
Q ss_pred ccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCCeEEEEeC
Q 018144 298 FSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 298 ~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~~~l 359 (360)
.+.|.+++++|+.. .+..+.+ ...+.++..+ +|+||+++. + .|.+++.
T Consensus 250 ---------~~~i~~~~~~g~~~-~~~~~~~--~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 250 ---------ANQIGRITNDNTIQ-EYQLQTE--NAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp ---------TTEEEEECTTSCEE-EEECCST--TCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred ---------CCeEEEECCCCcEE-EEECCcc--CCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 35899999988654 4544433 2356777776 599999998 6 8988864
No 16
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.83 E-value=2.8e-17 Score=148.23 Aligned_cols=220 Identities=15% Similarity=0.242 Sum_probs=162.6
Q ss_pred CCCCcceEEEcCCCCEEEEec-CCeEEEEE-CCeeeEEE-------------ecCCeEEEEeCC-CcEEEEcCCC-eEEE
Q 018144 77 SVNHPEDASMDKNGVIYTATR-DGWIKRLQ-DGTWVNWK-------------FIDSHLIICDNA-NGLHKVSEDG-VENF 139 (360)
Q Consensus 77 ~~~~Pe~i~~d~~G~l~v~~~-~G~I~~~~-~g~~~~~~-------------~~~g~L~v~~~~-~gl~~~~~~g-~~~l 139 (360)
....|.+|++|++|++|+++. ++.|++++ ++++..+. ..+|+||+++.. .++++++.++ ++.+
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~ 92 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEY 92 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEE
Confidence 357899999999999999995 78899998 66544322 246889999874 5688998657 6554
Q ss_pred eeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe--CCCcCcceEEEecC
Q 018144 140 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYFANGVALSRD 217 (360)
Q Consensus 140 ~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~--~~l~~pngia~~~d 217 (360)
.... ....|++++++++|++|+++.. .++|+++|+ +++...+. .....|++++++++
T Consensus 93 ~~~~---~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~ 151 (299)
T 2z2n_A 93 TLPN---PDSAPYGITEGPNGDIWFTEMN-----------------GNRIGRITD-DGKIREYELPNKGSYPSFITLGSD 151 (299)
T ss_dssp ECSS---TTCCEEEEEECTTSCEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT
T ss_pred eCCC---cCCCceeeEECCCCCEEEEecC-----------------CceEEEECC-CCCEEEecCCCCCCCCceEEEcCC
Confidence 3211 2346899999999999998643 468999999 57666543 24567999999999
Q ss_pred CCEEEEEeCCCCEEEEEEecCCcCcceeee-ccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCc
Q 018144 218 EDYVVVCESWKFRCRKYWLKGERKGKLETF-AENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 296 (360)
Q Consensus 218 g~~l~v~~t~~~~i~~~~~~g~~~~~~~~~-~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~ 296 (360)
|+ +|+++...++|++++.++ ....+ .......|.++++|++|++|++...
T Consensus 152 g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~------------------------ 202 (299)
T 2z2n_A 152 NA-LWFTENQNNAIGRITESG----DITEFKIPTPASGPVGITKGNDDALWFVEII------------------------ 202 (299)
T ss_dssp SC-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECTTSSEEEEETT------------------------
T ss_pred CC-EEEEeCCCCEEEEEcCCC----cEEEeeCCCCCCcceeEEECCCCCEEEEccC------------------------
Confidence 96 899988778999998733 22222 1112235889999999999999865
Q ss_pred cccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCCeEEEEeC
Q 018144 297 LFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 297 ~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~~~l 359 (360)
.+.|.+++++|+.. .+..+.. ...+.++..+ +|+||+++..++.|.+++.
T Consensus 203 ----------~~~i~~~~~~g~~~-~~~~~~~--~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 203 ----------GNKIGRITTSGEIT-EFKIPTP--NARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp ----------TTEEEEECTTCCEE-EEECSST--TCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred ----------CceEEEECCCCcEE-EEECCCC--CCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 25899999977754 3544322 3457778776 5899999998999998874
No 17
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.82 E-value=3.1e-18 Score=164.56 Aligned_cols=227 Identities=12% Similarity=0.110 Sum_probs=165.2
Q ss_pred CCCCcceEEEcC--CCCEEEEecCCeEEEEE-CC-eeeEEE-----------ecCCe-EEEEeCCC-----cEEEEcCCC
Q 018144 77 SVNHPEDASMDK--NGVIYTATRDGWIKRLQ-DG-TWVNWK-----------FIDSH-LIICDNAN-----GLHKVSEDG 135 (360)
Q Consensus 77 ~~~~Pe~i~~d~--~G~l~v~~~~G~I~~~~-~g-~~~~~~-----------~~~g~-L~v~~~~~-----gl~~~~~~g 135 (360)
.+..|.+|++|+ +|+||+++..++|.+++ ++ .+..+. ..+|+ |||++... .++.++.+|
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCCCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 478999999995 69999999668999999 44 444321 12444 99999742 455666544
Q ss_pred -eE---EEeeccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe--CCCcC
Q 018144 136 -VE---NFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYF 208 (360)
Q Consensus 136 -~~---~l~~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~--~~l~~ 208 (360)
+. .+. .+..|+++++++ +|+||++|.. .++|++++++++....+. .....
T Consensus 215 ~~~~~~~l~------~~~~p~giavdp~~g~lyv~d~~-----------------~~~V~~~~~~~~~~~~~~~~~~~~~ 271 (430)
T 3tc9_A 215 GFKVITELT------KGQNCNGAETHPINGELYFNSWN-----------------AGQVFRYDFTTQETTPLFTIQDSGW 271 (430)
T ss_dssp TSCSEEEEE------ECSSCCCEEECTTTCCEEEEETT-----------------TTEEEEEETTTTEEEEEEECSSSSC
T ss_pred ceeeeeeec------cCCCceEEEEeCCCCEEEEEECC-----------------CCEEEEEECCCCcEEEEEEcCCCCc
Confidence 32 222 246799999999 8999999864 568999999877663332 23467
Q ss_pred cceEEEecCCCEEEEEeCCCCEEEEEEecCC--cCcceeeeccC--------------CCCCCc-eeEE--------cCC
Q 018144 209 ANGVALSRDEDYVVVCESWKFRCRKYWLKGE--RKGKLETFAEN--------------LPGAPD-NINL--------APD 263 (360)
Q Consensus 209 pngia~~~dg~~l~v~~t~~~~i~~~~~~g~--~~~~~~~~~~~--------------~~g~pd-~i~~--------d~~ 263 (360)
|++++++++|+.|||++...++|++++.++. .......+... .-..|. ++++ |++
T Consensus 272 P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~ 351 (430)
T 3tc9_A 272 EFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDE 351 (430)
T ss_dssp CEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCC
T ss_pred ceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCC
Confidence 9999999999999999999999999998753 11112222211 011477 7887 567
Q ss_pred CCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCC--------CC-----Cc
Q 018144 264 GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDP--------TG-----QL 330 (360)
Q Consensus 264 G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~--------~g-----~~ 330 (360)
|+|||+... ...|.+++++|++....... +| ..
T Consensus 352 g~lyvaD~~----------------------------------n~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~ 397 (430)
T 3tc9_A 352 YDFYFCDRE----------------------------------NHCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEAR 397 (430)
T ss_dssp EEEEEEEGG----------------------------------GTEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCB
T ss_pred CeEEEEECC----------------------------------CcEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcE
Confidence 999999987 35899999999877666431 22 13
Q ss_pred ccceeeEEEE--CCEEEEEeCCCCeEEEEeCC
Q 018144 331 MSFVTSGLQV--DNHLYVISLTSNFIGKVQLS 360 (360)
Q Consensus 331 ~~~~t~~~~~--~g~Lylgs~~~~~i~~~~l~ 360 (360)
++.+.++..+ +|+||++...+++|.++.+|
T Consensus 398 ~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 398 FNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp CSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred eCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 5678888887 49999999999999999875
No 18
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.82 E-value=1.8e-17 Score=149.55 Aligned_cols=218 Identities=13% Similarity=0.166 Sum_probs=160.0
Q ss_pred CCCcceEEEcCCCCEEEEec-CCeEEEEE-CCeeeEEE-------------ecCCeEEEEeCC-CcEEEEcCCC-eEEEe
Q 018144 78 VNHPEDASMDKNGVIYTATR-DGWIKRLQ-DGTWVNWK-------------FIDSHLIICDNA-NGLHKVSEDG-VENFL 140 (360)
Q Consensus 78 ~~~Pe~i~~d~~G~l~v~~~-~G~I~~~~-~g~~~~~~-------------~~~g~L~v~~~~-~gl~~~~~~g-~~~l~ 140 (360)
...|.+|++|++|.+|+++. +++|++++ +++.+.+. ..+|+||+++.. .++++++.++ +..+.
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~ 135 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYE 135 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEE
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEec
Confidence 46899999999999999984 78899998 76544332 236889999864 5788898766 55442
Q ss_pred eccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEE--eCCCcCcceEEEecCC
Q 018144 141 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV--ADGFYFANGVALSRDE 218 (360)
Q Consensus 141 ~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~--~~~l~~pngia~~~dg 218 (360)
... ....+++++++++|++|+++.. .++|+++|+ ++++..+ ......|++++++++|
T Consensus 136 ~~~---~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g 194 (299)
T 2z2n_A 136 LPN---KGSYPSFITLGSDNALWFTENQ-----------------NNAIGRITE-SGDITEFKIPTPASGPVGITKGNDD 194 (299)
T ss_dssp CSS---TTCCEEEEEECTTSCEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS
T ss_pred CCC---CCCCCceEEEcCCCCEEEEeCC-----------------CCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCC
Confidence 211 1346899999999999998643 468999999 6777654 2345679999999998
Q ss_pred CEEEEEeCCCCEEEEEEecCCcCcceeeec-cCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCcc
Q 018144 219 DYVVVCESWKFRCRKYWLKGERKGKLETFA-ENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 297 (360)
Q Consensus 219 ~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~-~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 297 (360)
+ +|+++...++|.+|+.++. ...+. ......|.++++|++|++|++...
T Consensus 195 ~-l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~------------------------- 244 (299)
T 2z2n_A 195 A-LWFVEIIGNKIGRITTSGE----ITEFKIPTPNARPHAITAGAGIDLWFTEWG------------------------- 244 (299)
T ss_dssp S-EEEEETTTTEEEEECTTCC----EEEEECSSTTCCEEEEEECSTTCEEEEETT-------------------------
T ss_pred C-EEEEccCCceEEEECCCCc----EEEEECCCCCCCceeEEECCCCCEEEeccC-------------------------
Confidence 7 8999987889999997432 22221 112246889999999999999865
Q ss_pred ccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCCCCeEEEEeC
Q 018144 298 FSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 298 ~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~~~i~~~~l 359 (360)
.+.|.+++++|+ +..+..+.+ ...+.++...+|+||+++. .+.|.+++.
T Consensus 245 ---------~~~i~~~d~~g~-~~~~~~~~~--~~~~~~i~~~~g~l~v~~~-~~~l~~~~~ 293 (299)
T 2z2n_A 245 ---------ANKIGRLTSNNI-IEEYPIQIK--SAEPHGICFDGETIWFAME-CDKIGKLTL 293 (299)
T ss_dssp ---------TTEEEEEETTTE-EEEEECSSS--SCCEEEEEECSSCEEEEET-TTEEEEEEE
T ss_pred ---------CceEEEECCCCc-eEEEeCCCC--CCccceEEecCCCEEEEec-CCcEEEEEc
Confidence 358999999875 445544433 2356666666699999986 688888864
No 19
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.79 E-value=6.6e-17 Score=150.50 Aligned_cols=223 Identities=13% Similarity=0.135 Sum_probs=153.9
Q ss_pred CCcceEEEcCCCCEEEEec---CC--eEEEEECCeee-----------------EEE-ecCCeEEEEeCC------CcEE
Q 018144 79 NHPEDASMDKNGVIYTATR---DG--WIKRLQDGTWV-----------------NWK-FIDSHLIICDNA------NGLH 129 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v~~~---~G--~I~~~~~g~~~-----------------~~~-~~~g~L~v~~~~------~gl~ 129 (360)
..|++|+++++|.+|++.. +| +|+++++|+.. .+. +.+|+|||++.. ..|+
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 6899999999999999862 34 68887644332 122 236899999965 5799
Q ss_pred EEc-CCC-e-EEEeec-cCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC
Q 018144 130 KVS-EDG-V-ENFLSY-VNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD 204 (360)
Q Consensus 130 ~~~-~~g-~-~~l~~~-~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~ 204 (360)
+++ .+| + +.+.-. .......+++++++|+ +|.+|++|.+.. ..++|+++|+++++......
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~--------------~~~~i~v~d~~~g~~~r~~~ 162 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD--------------DKAALIRVDLQTGLAARVLQ 162 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG--------------GGCEEEEEETTTCCEEEECT
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC--------------CCCeEEEEECCCCCEEEEec
Confidence 999 667 3 333211 1122335789999996 579999987411 13567778877666544332
Q ss_pred C------------------------------CcCcceEEEecCCCEEEEEeCCCCEEEEEEecC---CcCcceeeecc--
Q 018144 205 G------------------------------FYFANGVALSRDEDYVVVCESWKFRCRKYWLKG---ERKGKLETFAE-- 249 (360)
Q Consensus 205 ~------------------------------l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g---~~~~~~~~~~~-- 249 (360)
+ ...+|||++++||+.||++++.+.+|++++.+. ......+.+..
T Consensus 163 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T 2qe8_A 163 GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIE 242 (343)
T ss_dssp TCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCE
T ss_pred CCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceE
Confidence 1 024799999999999999999888999998531 11111111100
Q ss_pred --CCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCC
Q 018144 250 --NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDP 326 (360)
Q Consensus 250 --~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~ 326 (360)
...+.|+++++|++|++|++... .+.|.++++ +|+......++
T Consensus 243 ~~g~~g~pdgia~d~~G~l~va~~~----------------------------------~~~V~~~d~~~G~~~~~~~~~ 288 (343)
T 2qe8_A 243 RYSEKPICDGISIDKDHNIYVGDLA----------------------------------HSAIGVITSADRAYKLLVTDE 288 (343)
T ss_dssp EEEECCSCSCEEECTTCCEEEEEGG----------------------------------GTEEEEEETTTTEEEEEEECG
T ss_pred ecccCCCCceEEECCCCCEEEEccC----------------------------------CCeEEEEECCCCCEEEEEECC
Confidence 12347999999999999999987 468999999 88866555544
Q ss_pred CCCcccceeeEEEE-CCEEEEEeCCCC
Q 018144 327 TGQLMSFVTSGLQV-DNHLYVISLTSN 352 (360)
Q Consensus 327 ~g~~~~~~t~~~~~-~g~Lylgs~~~~ 352 (360)
. ...++++... +|+||+.+...+
T Consensus 289 ~---~~~p~~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 289 K---LSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp G---GSCEEEEEECTTSCEEEEECCGG
T ss_pred c---eecCCeeEECCCCcEEEEeCccc
Confidence 2 4578888886 589999987544
No 20
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.78 E-value=3.2e-17 Score=151.64 Aligned_cols=228 Identities=13% Similarity=0.123 Sum_probs=156.7
Q ss_pred CCCCcceEEEcCCCCEEEEecCC-------------------------eEEEEE--CCeeeE------------EE-ecC
Q 018144 77 SVNHPEDASMDKNGVIYTATRDG-------------------------WIKRLQ--DGTWVN------------WK-FID 116 (360)
Q Consensus 77 ~~~~Pe~i~~d~~G~l~v~~~~G-------------------------~I~~~~--~g~~~~------------~~-~~~ 116 (360)
.+..|.+|++|++|++|+++..+ .|++++ +|++.. +. ..+
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 46789999999999999998433 699998 465432 22 247
Q ss_pred CeEEEEeCC-CcEEEEcCCC-e---EEEeec-cC---CccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCc
Q 018144 117 SHLIICDNA-NGLHKVSEDG-V---ENFLSY-VN---GSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPH 186 (360)
Q Consensus 117 g~L~v~~~~-~gl~~~~~~g-~---~~l~~~-~~---~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~ 186 (360)
|+|||++.. +.+.+++.+| . ..+... .. ...+..|++|++++ +|+||++|+. ..
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~----------------~~ 165 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY----------------CN 165 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS----------------SC
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC----------------CC
Confidence 889999976 4677888554 2 223211 01 23456799999999 8999999851 24
Q ss_pred cEEEEEcCCCCeEEE-Ee----------CCCcCcceEEEecCCCEEEEEeCCCCEEEEEEec-CCcCcceeeecc-CCCC
Q 018144 187 GQLLKYDPSSNITTL-VA----------DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLK-GERKGKLETFAE-NLPG 253 (360)
Q Consensus 187 g~l~~~d~~tg~~~~-~~----------~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~-g~~~~~~~~~~~-~~~g 253 (360)
++|.++|++ |+... +. ..+..|+|+++++++..+||++..+++|.+|+.+ |... ..+.. ....
T Consensus 166 ~~I~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~---~~~~~~~~~~ 241 (329)
T 3fvz_A 166 SRIVQFSPS-GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFV---REIKHASFGR 241 (329)
T ss_dssp CEEEEECTT-SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE---EEECCTTTTT
T ss_pred CeEEEEcCC-CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEE---EEEeccccCC
Confidence 689999976 54433 32 1345699999999966799999999999999987 4322 12211 1111
Q ss_pred CCc------eeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEEC-CCCcEEEEEeCC
Q 018144 254 APD------NINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDP 326 (360)
Q Consensus 254 ~pd------~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~ 326 (360)
.|. ++.++.+|++|++... ...|..++ .+|+++..+...
T Consensus 242 ~~~~~~~~pg~~~~~~g~~~v~~~~----------------------------------~~~v~~~~~~~g~~~~~~~~~ 287 (329)
T 3fvz_A 242 NVFAISYIPGFLFAVNGKPYFGDQE----------------------------------PVQGFVMNFSSGEIIDVFKPV 287 (329)
T ss_dssp CEEEEEEETTEEEEEECCCCTTCSC----------------------------------CCCEEEEETTTCCEEEEECCS
T ss_pred CcceeeecCCEEEEeCCCEEeccCC----------------------------------CcEEEEEEcCCCeEEEEEcCC
Confidence 233 4444446666655443 24677888 578888887543
Q ss_pred CCCcccceeeEEEE-CCEEEEEeCCCCeEEEEeC
Q 018144 327 TGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 327 ~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~~~l 359 (360)
.+. +..+.++..+ +|+||+++..+++|.++++
T Consensus 288 ~~~-~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 288 RKH-FDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp SSC-CSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred CCc-cCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 332 5678888887 4899999999999999975
No 21
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=1.2e-15 Score=147.29 Aligned_cols=229 Identities=12% Similarity=0.128 Sum_probs=162.4
Q ss_pred CCCCCCcceEEEcC--CCCEEEEec-CCeEEEEE--CCeeeE--------------EEe--------cCC-eEEEEeCCC
Q 018144 75 EGSVNHPEDASMDK--NGVIYTATR-DGWIKRLQ--DGTWVN--------------WKF--------IDS-HLIICDNAN 126 (360)
Q Consensus 75 ~~~~~~Pe~i~~d~--~G~l~v~~~-~G~I~~~~--~g~~~~--------------~~~--------~~g-~L~v~~~~~ 126 (360)
.+.+..|..|++|+ +++||++.. +++|.+++ ++.+.. +.. .+| .|||++...
T Consensus 135 ~~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 135 CCGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp CBCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred ccccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence 44467899999996 589999984 56788898 444332 222 244 499998764
Q ss_pred -------cEEEEc--CCC-eE------EEeeccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEE
Q 018144 127 -------GLHKVS--EDG-VE------NFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQL 189 (360)
Q Consensus 127 -------gl~~~~--~~g-~~------~l~~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l 189 (360)
.++.++ .+| +. .+. .+..|+++++++ +|+||++|.. .+.|
T Consensus 215 ~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~------~~~~p~giavdp~~g~LYvtd~~-----------------~g~V 271 (496)
T 3kya_A 215 GKGDESPSVYIIKRNADGTFDDRSDIQLIA------AYKQCNGATIHPINGELYFNSYE-----------------KGQV 271 (496)
T ss_dssp TTGGGEEEEEEEECCTTSCCSTTSCEEEEE------EESCCCCEEECTTTCCEEEEETT-----------------TTEE
T ss_pred CCcccCceEEEEecCCCCceeecccceeec------cCCCceEEEEcCCCCeEEEEECC-----------------CCEE
Confidence 267776 334 42 232 235799999999 6799999854 5689
Q ss_pred EEEcCC-------CCeE------------EE-Ee-CCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCc--Ccceee
Q 018144 190 LKYDPS-------SNIT------------TL-VA-DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGER--KGKLET 246 (360)
Q Consensus 190 ~~~d~~-------tg~~------------~~-~~-~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~--~~~~~~ 246 (360)
++||++ ++.. +. .. .....|.+|+++++|+.||++++.+++|++++.++.. ......
T Consensus 272 ~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~ 351 (496)
T 3kya_A 272 FRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYN 351 (496)
T ss_dssp EEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEE
T ss_pred EEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEE
Confidence 999987 5654 12 21 2235689999999999999999999999999887632 111122
Q ss_pred eccC--CC------------CCCc-eeEEc-------CCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccC
Q 018144 247 FAEN--LP------------GAPD-NINLA-------PDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITL 304 (360)
Q Consensus 247 ~~~~--~~------------g~pd-~i~~d-------~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 304 (360)
++.. .. ..|. ++++| .+|+|||+...
T Consensus 352 ~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~-------------------------------- 399 (496)
T 3kya_A 352 FVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRL-------------------------------- 399 (496)
T ss_dssp EEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGG--------------------------------
T ss_pred ecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECC--------------------------------
Confidence 2211 11 1477 78887 78999999987
Q ss_pred CCceEEEEECCCCcEEEEEeCC--------------CC-----CcccceeeEEEEC--CEEEEEeCCCCeEEEEeCC
Q 018144 305 GGGAHLIHVAEDGTIIRNLVDP--------------TG-----QLMSFVTSGLQVD--NHLYVISLTSNFIGKVQLS 360 (360)
Q Consensus 305 ~~~~~v~~~~~~g~~~~~~~~~--------------~g-----~~~~~~t~~~~~~--g~Lylgs~~~~~i~~~~l~ 360 (360)
..+|.+++++|.+....... +| ..++.++++..+. |.|||+...+++|.++.++
T Consensus 400 --N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 400 --NFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp --GTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred --CCEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECC
Confidence 46899999999776655321 22 1367788888873 8999999999999999864
No 22
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.72 E-value=1.3e-15 Score=142.23 Aligned_cols=190 Identities=11% Similarity=0.156 Sum_probs=140.2
Q ss_pred CCCcceEEEc-CCCCEEEEe-cCCeEEEEE-CCe-eeE-----------EEe--cCCeEEEEeCC-CcEEEEcCCC--eE
Q 018144 78 VNHPEDASMD-KNGVIYTAT-RDGWIKRLQ-DGT-WVN-----------WKF--IDSHLIICDNA-NGLHKVSEDG--VE 137 (360)
Q Consensus 78 ~~~Pe~i~~d-~~G~l~v~~-~~G~I~~~~-~g~-~~~-----------~~~--~~g~L~v~~~~-~gl~~~~~~g--~~ 137 (360)
+..|+++++| .++.||+++ .+++|++++ +|. .+. ++. .+++||+++.. +.|.+++.+| .+
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 151 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE
Confidence 6789999999 588999999 788999999 552 222 222 36889999976 4677777556 44
Q ss_pred EEeeccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe-CCCcCcceEEEe
Q 018144 138 NFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALS 215 (360)
Q Consensus 138 ~l~~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~-~~l~~pngia~~ 215 (360)
.+.. ..+..|++|++|+ +|.||+||.. ..++|++++++....+.+. .++..|||++++
T Consensus 152 ~l~~----~~l~~P~~iavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d 211 (349)
T 3v64_C 152 VLLW----QSLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSGRRIIADTHLFWPNGLTID 211 (349)
T ss_dssp EEEC----TTCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEESCCSSCSCEEEEEEE
T ss_pred EEEe----CCCCCcceEEEecCcCeEEEeccC----------------CCCEEEEEeCCCCCcEEEEECCCCCcceEEEe
Confidence 4432 1245799999997 6799999865 1368999998754444443 468899999999
Q ss_pred cCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCC
Q 018144 216 RDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYP 295 (360)
Q Consensus 216 ~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~ 295 (360)
++++.|||+++..++|.+++++|.. .+.+.....+.|++|+++ +|++|++.+.
T Consensus 212 ~~~~~lY~aD~~~~~I~~~~~dG~~---~~~~~~~~~~~P~giav~-~~~ly~td~~----------------------- 264 (349)
T 3v64_C 212 YAGRRMYWVDAKHHVIERANLDGSH---RKAVISQGLPHPFAITVF-EDSLYWTDWH----------------------- 264 (349)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCS---CEEEECSSCSSEEEEEEE-TTEEEEEETT-----------------------
T ss_pred CCCCEEEEEECCCCEEEEEeCCCCc---eEEEEeCCCCCceEEEEE-CCEEEEecCC-----------------------
Confidence 9888999999999999999998732 223332334579999995 5789999887
Q ss_pred ccccccccCCCceEEEEEC-CCCcEEEEEeC
Q 018144 296 KLFSQFITLGGGAHLIHVA-EDGTIIRNLVD 325 (360)
Q Consensus 296 ~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~ 325 (360)
.+.|.+++ .+|+..+.+..
T Consensus 265 -----------~~~V~~~~~~~G~~~~~i~~ 284 (349)
T 3v64_C 265 -----------TKSINSANKFTGKNQEIIRN 284 (349)
T ss_dssp -----------TTEEEEEETTTCCSCEEEEC
T ss_pred -----------CCeEEEEEccCCCccEEecc
Confidence 35888888 57776666543
No 23
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.72 E-value=6.4e-16 Score=159.48 Aligned_cols=216 Identities=14% Similarity=0.182 Sum_probs=155.4
Q ss_pred cceEEEcCCCCEEEEecCCeEEEEE--CCeeeEE--------------------EecCCe-EEEEeCCCcEEEEc-CCC-
Q 018144 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNW--------------------KFIDSH-LIICDNANGLHKVS-EDG- 135 (360)
Q Consensus 81 Pe~i~~d~~G~l~v~~~~G~I~~~~--~g~~~~~--------------------~~~~g~-L~v~~~~~gl~~~~-~~g- 135 (360)
-.+|+.|++|+||+|+.+|+|++++ +++++.+ .+.+|+ |||++...||++++ .++
T Consensus 359 V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 359 VSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp EEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC
T ss_pred eEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc
Confidence 4578999999999999888899998 4433222 134688 99999889999999 667
Q ss_pred eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-----C--cC
Q 018144 136 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-----F--YF 208 (360)
Q Consensus 136 ~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-----l--~~ 208 (360)
++.+...........+..+..|++|+||++. . ++|++||+++++++.+... + ..
T Consensus 439 ~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt------------------~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (795)
T 4a2l_A 439 VENFNQRNSQLVNENVYAILPDGEGNLWLGT------------------L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQ 499 (795)
T ss_dssp EEEECTTTSCCSCSCEEEEEECSSSCEEEEE------------------S-SCEEEEETTTTEEEECCBCTTCCBCCCCC
T ss_pred EEEeecCCCCcCCCeeEEEEECCCCCEEEEe------------------c-CceeEEeCCCCeEEEccccccccccCCce
Confidence 7666432111222467889999999999952 2 4799999998888765421 1 24
Q ss_pred cceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCC----CceeEEcCCCCEEEEEecCchhHHHHhhcc
Q 018144 209 ANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGA----PDNINLAPDGTFWIAIIKLDARRMKILNSS 284 (360)
Q Consensus 209 pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~----pd~i~~d~~G~lwva~~~~~~~~~~~~~~~ 284 (360)
.+.+..+++|+ +|++.. ++|++|+.++.+. ...... ...++ ...|..|++|+||+++..
T Consensus 500 i~~i~~d~~g~-lWigt~--~Gl~~~~~~~~~~-~~~~~~-~~~~l~~~~i~~i~~d~~g~lWigT~~------------ 562 (795)
T 4a2l_A 500 ITTLFRDSHKR-LWIGGE--EGLSVFKQEGLDI-QKASIL-PVSNVTKLFTNCIYEASNGIIWVGTRE------------ 562 (795)
T ss_dssp EEEEEECTTCC-EEEEES--SCEEEEEEETTEE-EECCCS-CSCGGGGSCEEEEEECTTSCEEEEESS------------
T ss_pred EEEEEECCCCC-EEEEeC--CceEEEeCCCCeE-EEecCC-CCCCCCCCeeEEEEECCCCCEEEEeCC------------
Confidence 56788888887 777765 4699999865432 111100 11122 345778999999999865
Q ss_pred hhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCCeEEEEe
Q 018144 285 KLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQ 358 (360)
Q Consensus 285 ~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~~~ 358 (360)
+|.+++++...+..+...+|++.+.+.++.++ +|+||+++ .+-|.+++
T Consensus 563 ------------------------Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~ 611 (795)
T 4a2l_A 563 ------------------------GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST--NRGISCFN 611 (795)
T ss_dssp ------------------------CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE--TTEEEEEE
T ss_pred ------------------------CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc--CCceEEEc
Confidence 79999998888888877778766778888887 59999999 45677665
No 24
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.72 E-value=7.7e-15 Score=137.01 Aligned_cols=215 Identities=13% Similarity=0.125 Sum_probs=154.0
Q ss_pred ceEEEcCCCCEEEEecCCeEEEEE-CCe-ee----------EEE--ecCCeEEEEeCC-CcEEEEcCCC--eEEEeeccC
Q 018144 82 EDASMDKNGVIYTATRDGWIKRLQ-DGT-WV----------NWK--FIDSHLIICDNA-NGLHKVSEDG--VENFLSYVN 144 (360)
Q Consensus 82 e~i~~d~~G~l~v~~~~G~I~~~~-~g~-~~----------~~~--~~~g~L~v~~~~-~gl~~~~~~g--~~~l~~~~~ 144 (360)
.+.+.++++.|+++... .|.+++ +|. .+ .+. ..+++||+++.. +.|++++.+| .+.+...
T Consensus 37 ~C~~~~~~~~ll~~~~~-~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~-- 113 (349)
T 3v64_C 37 SCKALGPEPVLLFANRI-DIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST-- 113 (349)
T ss_dssp CEEESSSCCEEEEECBS-CEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS--
T ss_pred cccccccCceeEeeccc-ceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC--
Confidence 45555566777777643 488887 542 22 122 246889999976 4677888444 4444221
Q ss_pred CccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe-CCCcCcceEEEecCCCEEE
Q 018144 145 GSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVV 222 (360)
Q Consensus 145 ~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~-~~l~~pngia~~~dg~~l~ 222 (360)
.+..|++|++|. +|+||++|.. .++|.++++++...+.+. .++..|++++++|++..||
T Consensus 114 --~~~~p~glavd~~~g~ly~~d~~-----------------~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly 174 (349)
T 3v64_C 114 --GLESPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIY 174 (349)
T ss_dssp --SCSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEE
T ss_pred --CCCCccEEEEecCCCeEEEEcCC-----------------CCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEE
Confidence 134689999996 6799999865 458999998754444443 5688999999999877899
Q ss_pred EEeCCC-CEEEEEEecCCcCcceeeeccCCCCCCceeEEcC-CCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccc
Q 018144 223 VCESWK-FRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQ 300 (360)
Q Consensus 223 v~~t~~-~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 300 (360)
|+++.. ++|++++++|.. .+.+....-..|++|++|+ +|+||++...
T Consensus 175 ~td~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnGla~d~~~~~lY~aD~~---------------------------- 223 (349)
T 3v64_C 175 WTDWGNTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAK---------------------------- 223 (349)
T ss_dssp EEECSSSCEEEEEETTSCS---CEESCCSSCSCEEEEEEETTTTEEEEEETT----------------------------
T ss_pred EeccCCCCEEEEEeCCCCC---cEEEEECCCCCcceEEEeCCCCEEEEEECC----------------------------
Confidence 999988 999999998742 2233222234699999995 7789999876
Q ss_pred cccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCCCCeEEEEe
Q 018144 301 FITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 358 (360)
Q Consensus 301 ~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~~~i~~~~ 358 (360)
.+.|.+++.+|...+.+.... ...+.++...+++||+++..+++|.+++
T Consensus 224 ------~~~I~~~~~dG~~~~~~~~~~---~~~P~giav~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 224 ------HHVIERANLDGSHRKAVISQG---LPHPFAITVFEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp ------TTEEEEEETTSCSCEEEECSS---CSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ------CCEEEEEeCCCCceEEEEeCC---CCCceEEEEECCEEEEecCCCCeEEEEE
Confidence 358999998886544443322 3467777778899999999999999986
No 25
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.71 E-value=3.5e-15 Score=137.96 Aligned_cols=202 Identities=13% Similarity=0.079 Sum_probs=141.2
Q ss_pred CCCcceEEEcCCCCEEEEe-cCCeEEEEE--CCeeeE----------------EEecCCeEEEEeC--CCcEEEEc-CCC
Q 018144 78 VNHPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVN----------------WKFIDSHLIICDN--ANGLHKVS-EDG 135 (360)
Q Consensus 78 ~~~Pe~i~~d~~G~l~v~~-~~G~I~~~~--~g~~~~----------------~~~~~g~L~v~~~--~~gl~~~~-~~g 135 (360)
...|++|+++++|.+|+++ .++.|.++| ++++.. +...+++|||+++ .+.+..+| .++
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~ 162 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETD 162 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTT
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCC
Confidence 4789999998889999999 789999999 554331 1224678999986 46788899 666
Q ss_pred -eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC--CCcCcceE
Q 018144 136 -VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--GFYFANGV 212 (360)
Q Consensus 136 -~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~--~l~~pngi 212 (360)
+...... + ..|++++++++|++|+++...... ..+ ....+.|+++|++++++..... ....|+++
T Consensus 163 ~~~~~i~~--g---~~p~~i~~~~dG~l~v~~~~~~~~-~~~------~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~l 230 (328)
T 3dsm_A 163 KVVDELTI--G---IQPTSLVMDKYNKMWTITDGGYEG-SPY------GYEAPSLYRIDAETFTVEKQFKFKLGDWPSEV 230 (328)
T ss_dssp EEEEEEEC--S---SCBCCCEECTTSEEEEEBCCBCTT-CSS------CBCCCEEEEEETTTTEEEEEEECCTTCCCEEE
T ss_pred eEEEEEEc--C---CCccceEEcCCCCEEEEECCCccC-Ccc------ccCCceEEEEECCCCeEEEEEecCCCCCceeE
Confidence 3322111 1 358899999999999987541000 000 0013689999999888764322 13479999
Q ss_pred EEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcC-CCCEEEEEecCchhHHHHhhcchhHHHHH
Q 018144 213 ALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVL 291 (360)
Q Consensus 213 a~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~r~~~ 291 (360)
++++|++.+|+++. .|+++|.+..+..... +.......|+++++|+ +|++||+....
T Consensus 231 a~~~d~~~lyv~~~---~v~~~d~~t~~~~~~~-~~~~~~~~p~gi~vdp~~g~lyva~~~~------------------ 288 (328)
T 3dsm_A 231 QLNGTRDTLYWINN---DIWRMPVEADRVPVRP-FLEFRDTKYYGLTVNPNNGEVYVADAID------------------ 288 (328)
T ss_dssp EECTTSCEEEEESS---SEEEEETTCSSCCSSC-SBCCCSSCEEEEEECTTTCCEEEEECTT------------------
T ss_pred EEecCCCEEEEEcc---EEEEEECCCCceeeee-eecCCCCceEEEEEcCCCCeEEEEcccc------------------
Confidence 99999999999986 6999998654432211 2111134799999997 78999998210
Q ss_pred HhCCccccccccCCCceEEEEECCCCcEEEEEeC
Q 018144 292 AAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVD 325 (360)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~ 325 (360)
-...+.|.+|+++|+.+..+..
T Consensus 289 ------------y~~~~~V~v~d~~g~~~~~i~~ 310 (328)
T 3dsm_A 289 ------------YQQQGIVYRYSPQGKLIDEFYV 310 (328)
T ss_dssp ------------SSSEEEEEEECTTCCEEEEEEE
T ss_pred ------------cccCCEEEEECCCCCEEEEEEe
Confidence 0014789999999999988864
No 26
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.70 E-value=4.9e-15 Score=138.57 Aligned_cols=244 Identities=15% Similarity=0.184 Sum_probs=157.3
Q ss_pred eEecCCCCCCcceEEEcCCCCEEEEecCCeEEEEE-CCeeeEE----------------Ee-c----CCeEEEEeCC---
Q 018144 71 IKVGEGSVNHPEDASMDKNGVIYTATRDGWIKRLQ-DGTWVNW----------------KF-I----DSHLIICDNA--- 125 (360)
Q Consensus 71 ~~~~~~~~~~Pe~i~~d~~G~l~v~~~~G~I~~~~-~g~~~~~----------------~~-~----~g~L~v~~~~--- 125 (360)
+.+..+ +..|++|+++++|.||+++..|+|++++ +|+ +.+ .. + ++.|||+...
T Consensus 22 ~~va~~-l~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~ 99 (354)
T 3a9g_A 22 SEVASD-LEVPWSIAPLGGGRYLVTERPGRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAE 99 (354)
T ss_dssp EEEECS-CSCEEEEEEEETTEEEEEETTTEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECG
T ss_pred EEEeCC-CCCCeEEEEcCCCeEEEEeCCCEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCC
Confidence 556554 7999999999999999999889999998 775 322 11 1 3689998864
Q ss_pred -----CcEEEEc-CCC------eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEc
Q 018144 126 -----NGLHKVS-EDG------VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYD 193 (360)
Q Consensus 126 -----~gl~~~~-~~g------~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d 193 (360)
..|++++ ..+ .+.+.+..+......+++|++++||+||||+...... ....+ .....|+|+|++
T Consensus 100 ~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~--~~~~d--~~~~~G~I~ri~ 175 (354)
T 3a9g_A 100 GGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADP--RLAQD--LSSLAGKILRVD 175 (354)
T ss_dssp GGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCG--GGGTC--TTCCSSEEEEEC
T ss_pred CCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCC--ccccC--CCCCCeEEEEEc
Confidence 5688887 321 2223332333334578999999999999997542110 00000 123357999999
Q ss_pred CCCC--------eEEEEeCCCcCcceEEEecCCCEEEEEeCCCCE---EEEEEecCCcCcc------------eeeecc-
Q 018144 194 PSSN--------ITTLVADGFYFANGVALSRDEDYVVVCESWKFR---CRKYWLKGERKGK------------LETFAE- 249 (360)
Q Consensus 194 ~~tg--------~~~~~~~~l~~pngia~~~dg~~l~v~~t~~~~---i~~~~~~g~~~~~------------~~~~~~- 249 (360)
++.. ..+.+..++..|+|++++++...||+++.+.++ |.++.. |...+. ......
T Consensus 176 ~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~-G~nyGwp~~~g~~~~~~~~~p~~~~ 254 (354)
T 3a9g_A 176 EEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK-GGNYGWPLATGKAGRGEFVDPVIDT 254 (354)
T ss_dssp TTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT-TCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred CCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC-CCcCCCCcccCCCCCCCCcCCEeec
Confidence 9743 245677788999999999943359999987654 555542 221110 001100
Q ss_pred -CCCCCCceeEE-------cCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC--CcE
Q 018144 250 -NLPGAPDNINL-------APDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED--GTI 319 (360)
Q Consensus 250 -~~~g~pd~i~~-------d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~--g~~ 319 (360)
.....|.++++ +-+|++|++... .+.|.+++.+ |++
T Consensus 255 ~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~----------------------------------~~~v~~~~~~~~g~~ 300 (354)
T 3a9g_A 255 GSETWAPSGASFVHGDMFPGLRGWLLIACLR----------------------------------GSMLAAVNFGDNMEV 300 (354)
T ss_dssp TTCCCCEEEEEECCSSSCGGGTTEEEEEETT----------------------------------TTEEEEEEECGGGCE
T ss_pred CCCCcCCcceEEECCCCCcccCCcEEEEEcC----------------------------------CCEEEEEEECCCCcc
Confidence 11235889998 568899999876 3577777654 444
Q ss_pred E--EEEeCCCCCcccceeeEEEE-CCEEEEEeCC-CC---------eEEEEe
Q 018144 320 I--RNLVDPTGQLMSFVTSGLQV-DNHLYVISLT-SN---------FIGKVQ 358 (360)
Q Consensus 320 ~--~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~-~~---------~i~~~~ 358 (360)
. +.+.. +. ...+..+... +|.||+.+.. .. +|.|+.
T Consensus 301 ~~~~~~~~--~~-~~rp~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~ 349 (354)
T 3a9g_A 301 RKISTFFK--NV-FGRLRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIV 349 (354)
T ss_dssp EEEEEECT--TT-SCCEEEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEE
T ss_pred cceeeecc--CC-CCCeeEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEe
Confidence 3 22322 11 2357777776 5899999874 32 888875
No 27
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.70 E-value=2.9e-15 Score=141.85 Aligned_cols=190 Identities=10% Similarity=0.147 Sum_probs=139.8
Q ss_pred CCCcceEEEc-CCCCEEEEe-cCCeEEEEE-CCe-eeEE-----------Ee--cCCeEEEEeCCC-cEEEEcCCC--eE
Q 018144 78 VNHPEDASMD-KNGVIYTAT-RDGWIKRLQ-DGT-WVNW-----------KF--IDSHLIICDNAN-GLHKVSEDG--VE 137 (360)
Q Consensus 78 ~~~Pe~i~~d-~~G~l~v~~-~~G~I~~~~-~g~-~~~~-----------~~--~~g~L~v~~~~~-gl~~~~~~g--~~ 137 (360)
+..|+++++| .++.||+++ .+++|++++ +|. .+.+ +. .+++||+++... .|.+++.+| .+
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 194 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE
Confidence 6789999999 478999999 788999999 553 2222 11 367899999864 566666555 44
Q ss_pred EEeeccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEE-eCCCcCcceEEEe
Q 018144 138 NFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALS 215 (360)
Q Consensus 138 ~l~~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~-~~~l~~pngia~~ 215 (360)
.+.. ..+..|++|++|+ +|.||+||.. ..++|++++++....+.+ ..++..||||+++
T Consensus 195 ~l~~----~~l~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd 254 (386)
T 3v65_B 195 VLLW----QSLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSGRRIIADTHLFWPNGLTID 254 (386)
T ss_dssp EEEC----SSCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEEEEE
T ss_pred Eeec----CCCCCCcEEEEEcCCCeEEEeccC----------------CCCEEEEEeCCCCCcEEEEECCCCCeeeEEEe
Confidence 4432 1245799999996 6789999865 136899999875444444 3568889999999
Q ss_pred cCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCC
Q 018144 216 RDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYP 295 (360)
Q Consensus 216 ~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~ 295 (360)
++++.|||+++..++|.+++++|.. ...+.....+.|++|+++ +|++|++.+.
T Consensus 255 ~~~~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~P~giav~-~~~ly~td~~----------------------- 307 (386)
T 3v65_B 255 YAGRRMYWVDAKHHVIERANLDGSH---RKAVISQGLPHPFAITVF-EDSLYWTDWH----------------------- 307 (386)
T ss_dssp GGGTEEEEEETTTTEEEEECTTSCS---CEEEECSSCSSEEEEEEE-TTEEEEEETT-----------------------
T ss_pred CCCCEEEEEECCCCEEEEEeCCCCe---eEEEEECCCCCceEEEEE-CCEEEEeeCC-----------------------
Confidence 9888999999999999999998732 223332334579999995 4689998876
Q ss_pred ccccccccCCCceEEEEEC-CCCcEEEEEeC
Q 018144 296 KLFSQFITLGGGAHLIHVA-EDGTIIRNLVD 325 (360)
Q Consensus 296 ~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~ 325 (360)
.+.|.+++ .+|+..+.+..
T Consensus 308 -----------~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 308 -----------TKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp -----------TTEEEEEETTTCCSCEEEEC
T ss_pred -----------CCeEEEEECCCCcceEEEcc
Confidence 36899998 57877666654
No 28
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=2.3e-15 Score=155.04 Aligned_cols=212 Identities=12% Similarity=0.116 Sum_probs=149.7
Q ss_pred cceEEEcCCCCEEEEecCCeEEEEE--CCeeeEE---------------------EecCCeEEEEeCCCcEEEEc-CCC-
Q 018144 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNW---------------------KFIDSHLIICDNANGLHKVS-EDG- 135 (360)
Q Consensus 81 Pe~i~~d~~G~l~v~~~~G~I~~~~--~g~~~~~---------------------~~~~g~L~v~~~~~gl~~~~-~~g- 135 (360)
-.+|+.|++|.||+|+.+++|++++ .+.++.+ .+.+|+|||++...||++++ .++
T Consensus 315 v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~ 394 (781)
T 3v9f_A 315 ARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRV 394 (781)
T ss_dssp EEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEE
T ss_pred EEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCe
Confidence 4578999999999999888899987 3332221 22358899999888999999 444
Q ss_pred eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC---CcCcceE
Q 018144 136 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG---FYFANGV 212 (360)
Q Consensus 136 ~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~---l~~pngi 212 (360)
++.+... .......+..++.|++|+||++ +..++|+++|+++++++.+... ......+
T Consensus 395 ~~~~~~~-~~~~~~~v~~i~~d~~g~lWig------------------t~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i 455 (781)
T 3v9f_A 395 AIYNKEN-RELLSNSVLCSLKDSEGNLWFG------------------TYLGNISYYNTRLKKFQIIELEKNELLDVRVF 455 (781)
T ss_dssp EECC------CCCSBEEEEEECTTSCEEEE------------------ETTEEEEEECSSSCEEEECCSTTTCCCCEEEE
T ss_pred EEEccCC-CCCCCcceEEEEECCCCCEEEE------------------eccCCEEEEcCCCCcEEEeccCCCCCCeEEEE
Confidence 4433211 1122245788999999999995 3346899999988888766431 2345677
Q ss_pred EEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeecc-CC-CCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHH
Q 018144 213 ALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAE-NL-PGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHV 290 (360)
Q Consensus 213 a~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~-~~-~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~ 290 (360)
+.+++|. +|++.. .+|++|+.+..+......... .. ...+..++.|++|+||+++..
T Consensus 456 ~~d~~g~-lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~------------------ 514 (781)
T 3v9f_A 456 YEDKNKK-IWIGTH--AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG------------------ 514 (781)
T ss_dssp EECTTSE-EEEEET--TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS------------------
T ss_pred EECCCCC-EEEEEC--CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC------------------
Confidence 7888875 888765 579999986543322211110 01 123556889999999999974
Q ss_pred HHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeC
Q 018144 291 LAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISL 349 (360)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~ 349 (360)
++|++++++++.+..+....+...+.+.++.++ +|+||+|+.
T Consensus 515 -----------------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~ 557 (781)
T 3v9f_A 515 -----------------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG 557 (781)
T ss_dssp -----------------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET
T ss_pred -----------------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC
Confidence 379999998888888877777666778888887 599999987
No 29
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.69 E-value=9.2e-15 Score=134.55 Aligned_cols=201 Identities=11% Similarity=0.105 Sum_probs=142.6
Q ss_pred CCCcceEEEcC-CCCEEEEe-cCCeEEEEE-CCeeeEEEecCCeEEEEeCCCcEEEEcCCCeEEEeeccCCccccccccE
Q 018144 78 VNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DGTWVNWKFIDSHLIICDNANGLHKVSEDGVENFLSYVNGSKLRFANDV 154 (360)
Q Consensus 78 ~~~Pe~i~~d~-~G~l~v~~-~~G~I~~~~-~g~~~~~~~~~g~L~v~~~~~gl~~~~~~g~~~l~~~~~~~~~~~~n~l 154 (360)
+..|+++++|. ++.||+++ .+++|++++ +|... +. ..+.+.. ..+..|.+|
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~------~~----------------~~~~~~~----~~~~~p~gl 82 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG------VS----------------SYDTVIS----RDIQAPDGL 82 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC------------------------------CEEEEC----SSCSCCCEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCC------Cc----------------ccEEEEe----CCCCCcCEE
Confidence 67899999996 67899888 567888887 54210 00 0011110 112468899
Q ss_pred EEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe-CCCcCcceEEEecCCCEEEEEeCCC-CEE
Q 018144 155 VEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCESWK-FRC 231 (360)
Q Consensus 155 ~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~-~~l~~pngia~~~dg~~l~v~~t~~-~~i 231 (360)
++|. +|+||++|.. .++|.++++++...+.+. ..+..|++++++|++..+||++... ++|
T Consensus 83 avd~~~~~ly~~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I 145 (316)
T 1ijq_A 83 AVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKI 145 (316)
T ss_dssp EEETTTTEEEEEETT-----------------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred EEeecCCeEEEEECC-----------------CCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeE
Confidence 9995 6799999865 468999998755444444 4678999999999877899999875 799
Q ss_pred EEEEecCCcCcceeeeccCCCCCCceeEEcC-CCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEE
Q 018144 232 RKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHL 310 (360)
Q Consensus 232 ~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v 310 (360)
++++++|.. .+.+....-..|.+|++|+ +++||++... .+.|
T Consensus 146 ~~~~~dG~~---~~~~~~~~~~~P~gla~d~~~~~lY~~D~~----------------------------------~~~I 188 (316)
T 1ijq_A 146 KKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSK----------------------------------LHSI 188 (316)
T ss_dssp EEEETTSCC---EEEEECSSCSCEEEEEEETTTTEEEEEETT----------------------------------TTEE
T ss_pred EEEcCCCCC---eEEEEECCCCCceEEEEeccCCEEEEEECC----------------------------------CCeE
Confidence 999998742 2333322234799999996 5689999876 3589
Q ss_pred EEECCCCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCCCCeEEEEeC
Q 018144 311 IHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 311 ~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~~~i~~~~l 359 (360)
.+++.+|...+.+....+ ....+.++..++++||++...+++|.+++.
T Consensus 189 ~~~d~dg~~~~~~~~~~~-~~~~P~giav~~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 189 SSIDVNGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp EEEETTSCSCEEEEECTT-TTSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred EEEecCCCceEEEeecCC-ccCCcEEEEEECCEEEEEECCCCeEEEEeC
Confidence 999998865555543221 145677787788999999999999999863
No 30
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=8.4e-16 Score=158.29 Aligned_cols=213 Identities=12% Similarity=0.058 Sum_probs=153.1
Q ss_pred cceEEEcCCCCEEEEecCCeEEEEE-C-Ceee--------------EE-EecCCeEEEEeCCCcEEEEc-CCC-eEEEee
Q 018144 81 PEDASMDKNGVIYTATRDGWIKRLQ-D-GTWV--------------NW-KFIDSHLIICDNANGLHKVS-EDG-VENFLS 141 (360)
Q Consensus 81 Pe~i~~d~~G~l~v~~~~G~I~~~~-~-g~~~--------------~~-~~~~g~L~v~~~~~gl~~~~-~~g-~~~l~~ 141 (360)
..+|+.|++|.||+|+.+++|++++ . +.++ .+ .+.+|+|||++...|+++++ .++ ++.+..
T Consensus 365 v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~ 444 (781)
T 3v9f_A 365 VSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIEL 444 (781)
T ss_dssp EEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCS
T ss_pred eEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEecc
Confidence 4678899999999999888899998 3 2222 11 23478999999878999999 567 665532
Q ss_pred ccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC------CcCcceEEEe
Q 018144 142 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG------FYFANGVALS 215 (360)
Q Consensus 142 ~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~------l~~pngia~~ 215 (360)
. ......+..+..|++|+||++. . ++|+++|+++++++.+... ....+.++.+
T Consensus 445 ~--~~~~~~v~~i~~d~~g~lwigt------------------~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d 503 (781)
T 3v9f_A 445 E--KNELLDVRVFYEDKNKKIWIGT------------------H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQD 503 (781)
T ss_dssp T--TTCCCCEEEEEECTTSEEEEEE------------------T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEEC
T ss_pred C--CCCCCeEEEEEECCCCCEEEEE------------------C-CceEEEeCCCCeEEecccCcccccccceeEEEEEc
Confidence 1 2222457789999999999952 2 5799999988877655421 2346788899
Q ss_pred cCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCc----eeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHH
Q 018144 216 RDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPD----NINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVL 291 (360)
Q Consensus 216 ~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd----~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~ 291 (360)
++|+ +|++... ++|++|+.++. ..+.+.. ..++|+ .|..|++|+||+++..
T Consensus 504 ~~g~-lWigt~~-~Gl~~~~~~~~---~~~~~~~-~~~l~~~~i~~i~~d~~g~lWi~T~~------------------- 558 (781)
T 3v9f_A 504 SEGR-FWIGTFG-GGVGIYTPDMQ---LVRKFNQ-YEGFCSNTINQIYRSSKGQMWLATGE------------------- 558 (781)
T ss_dssp TTCC-EEEEESS-SCEEEECTTCC---EEEEECT-TTTCSCSCEEEEEECTTSCEEEEETT-------------------
T ss_pred CCCC-EEEEEcC-CCEEEEeCCCC---eEEEccC-CCCCCCCeeEEEEECCCCCEEEEECC-------------------
Confidence 9987 7777653 45999987543 3333321 223443 5778999999999875
Q ss_pred HhCCccccccccCCCceEE-EEECCCCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCCeEEEEe
Q 018144 292 AAYPKLFSQFITLGGGAHL-IHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQ 358 (360)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~v-~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~~~ 358 (360)
++ .+++++...+..+...+|++.+.+.++.++ +|+||+++.. -|.+++
T Consensus 559 -----------------Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~--Gl~~~~ 608 (781)
T 3v9f_A 559 -----------------GLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTNT--GISCYI 608 (781)
T ss_dssp -----------------EEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECSS--CEEEEE
T ss_pred -----------------CceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcCC--ceEEEE
Confidence 56 999998777778877778766778888887 5999999854 476665
No 31
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.69 E-value=1.2e-14 Score=129.96 Aligned_cols=193 Identities=11% Similarity=0.119 Sum_probs=134.9
Q ss_pred CCcceEEEcC-CCCEEEEe-cCCeEEEEE-CCeeeEEEecCCeEEEEeCCCcEEEEcCCCeEEEeeccCCccccccccEE
Q 018144 79 NHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DGTWVNWKFIDSHLIICDNANGLHKVSEDGVENFLSYVNGSKLRFANDVV 155 (360)
Q Consensus 79 ~~Pe~i~~d~-~G~l~v~~-~~G~I~~~~-~g~~~~~~~~~g~L~v~~~~~gl~~~~~~g~~~l~~~~~~~~~~~~n~l~ 155 (360)
..|+++++|+ ++.||+++ .++.|++++ +|.. .+.+.. ..+..|++|+
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~--------------------------~~~~~~----~~~~~p~~ia 85 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE--------------------------PTTIIR----QDLGSPEGIA 85 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC--------------------------CEEEEC----TTCCCEEEEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCC--------------------------cEEEEE----CCCCCccEEE
Confidence 4677777775 46677776 455666665 4321 111111 1124688999
Q ss_pred EcCC-CcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe-CCCcCcceEEEecCCCEEEEEeCC--CCEE
Q 018144 156 EASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCESW--KFRC 231 (360)
Q Consensus 156 ~d~d-G~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~-~~l~~pngia~~~dg~~l~v~~t~--~~~i 231 (360)
+|++ |+||++|.. .++|.+++.++...+.+. .++..|++++++++++.+||++.. .++|
T Consensus 86 ~d~~~~~lyv~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I 148 (267)
T 1npe_A 86 LDHLGRTIFWTDSQ-----------------LDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKI 148 (267)
T ss_dssp EETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEE
T ss_pred EEecCCeEEEEECC-----------------CCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEE
Confidence 9985 689999864 468999998744433333 456789999999987789999986 5799
Q ss_pred EEEEecCCcCcceeeeccCCCCCCceeEEcCC-CCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEE
Q 018144 232 RKYWLKGERKGKLETFAENLPGAPDNINLAPD-GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHL 310 (360)
Q Consensus 232 ~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~-G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v 310 (360)
+++++++.. .+.+.......|.++++|++ ++||++... .+.|
T Consensus 149 ~~~~~dg~~---~~~~~~~~~~~P~gia~d~~~~~lyv~d~~----------------------------------~~~I 191 (267)
T 1npe_A 149 ETSHMDGTN---RRILAQDNLGLPNGLTFDAFSSQLCWVDAG----------------------------------THRA 191 (267)
T ss_dssp EEEETTSCC---CEEEECTTCSCEEEEEEETTTTEEEEEETT----------------------------------TTEE
T ss_pred EEEecCCCC---cEEEEECCCCCCcEEEEcCCCCEEEEEECC----------------------------------CCEE
Confidence 999988743 22332222346999999986 579999876 3589
Q ss_pred EEECCCCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCCCCeEEEEeC
Q 018144 311 IHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 311 ~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~~~i~~~~l 359 (360)
.+++.+|.....+.. + ...+.++..++++||+++..++.|.+++.
T Consensus 192 ~~~~~~g~~~~~~~~--~--~~~P~gi~~d~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 192 ECLNPAQPGRRKVLE--G--LQYPFAVTSYGKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp EEEETTEEEEEEEEE--C--CCSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred EEEecCCCceEEEec--C--CCCceEEEEeCCEEEEEECCCCeEEEEeC
Confidence 999998765544432 1 23456777778999999999999999875
No 32
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.69 E-value=2.4e-14 Score=135.51 Aligned_cols=216 Identities=13% Similarity=0.122 Sum_probs=154.7
Q ss_pred cceEEEcCCCCEEEEecCCeEEEEE-CC-eeeE----------EE--ecCCeEEEEeCC-CcEEEEcCCC--eEEEeecc
Q 018144 81 PEDASMDKNGVIYTATRDGWIKRLQ-DG-TWVN----------WK--FIDSHLIICDNA-NGLHKVSEDG--VENFLSYV 143 (360)
Q Consensus 81 Pe~i~~d~~G~l~v~~~~G~I~~~~-~g-~~~~----------~~--~~~g~L~v~~~~-~gl~~~~~~g--~~~l~~~~ 143 (360)
-.+.+.++++.|+++.. ..|.+++ ++ ..+. +. ..+++||+++.. +.|++++.+| .+.+..
T Consensus 79 ~~C~~~~~~~~l~~~~~-~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-- 155 (386)
T 3v65_B 79 RSCKALGPEPVLLFANR-IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-- 155 (386)
T ss_dssp SCEEECSSCCEEEEECB-SCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC--
T ss_pred CeECCccccceeEeecC-ccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe--
Confidence 34555566677777764 4688888 44 2221 22 246889999976 4677888544 444422
Q ss_pred CCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEE-eCCCcCcceEEEecCCCEE
Q 018144 144 NGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDYV 221 (360)
Q Consensus 144 ~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~-~~~l~~pngia~~~dg~~l 221 (360)
..+..|++|++|. .|+||++|.. .++|.++++++...+.+ ..++..|+||++++++..|
T Consensus 156 --~~~~~p~glavd~~~g~lY~~d~~-----------------~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~l 216 (386)
T 3v65_B 156 --TGLESPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTI 216 (386)
T ss_dssp --SSCSCCCCEEEETTTTEEEEEETT-----------------TTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEE
T ss_pred --CCCCCccEEEEEeCCCeEEEEcCC-----------------CCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeE
Confidence 1235689999995 6799999865 45899999875444444 3567899999999988889
Q ss_pred EEEeCCC-CEEEEEEecCCcCcceeeeccCCCCCCceeEEc-CCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCcccc
Q 018144 222 VVCESWK-FRCRKYWLKGERKGKLETFAENLPGAPDNINLA-PDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFS 299 (360)
Q Consensus 222 ~v~~t~~-~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d-~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 299 (360)
||++... .+|++++++|.. ...+.......|++|++| .+|+||++...
T Consensus 217 y~td~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnGlavd~~~~~lY~aD~~--------------------------- 266 (386)
T 3v65_B 217 YWTDWGNTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAK--------------------------- 266 (386)
T ss_dssp EEEECSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEEGGGTEEEEEETT---------------------------
T ss_pred EEeccCCCCEEEEEeCCCCC---cEEEEECCCCCeeeEEEeCCCCEEEEEECC---------------------------
Confidence 9999987 899999998742 223322223469999999 57789999876
Q ss_pred ccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCCCCeEEEEe
Q 018144 300 QFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 358 (360)
Q Consensus 300 ~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~~~i~~~~ 358 (360)
.+.|.+++.+|...+.+.... ...+.++...+++||++...+++|.+++
T Consensus 267 -------~~~I~~~d~dG~~~~~~~~~~---~~~P~giav~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 267 -------HHVIERANLDGSHRKAVISQG---LPHPFAITVFEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp -------TTEEEEECTTSCSCEEEECSS---CSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred -------CCEEEEEeCCCCeeEEEEECC---CCCceEEEEECCEEEEeeCCCCeEEEEE
Confidence 358999999886544443322 3467778778899999999999999986
No 33
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=1.1e-14 Score=129.78 Aligned_cols=172 Identities=16% Similarity=0.213 Sum_probs=124.6
Q ss_pred CCCCcceEEEcCCCCEEEEecCCeEEEEE-CCee-e-----------EEE-ecCCeEEEEeCC-CcEEEEcC-CCeEEEe
Q 018144 77 SVNHPEDASMDKNGVIYTATRDGWIKRLQ-DGTW-V-----------NWK-FIDSHLIICDNA-NGLHKVSE-DGVENFL 140 (360)
Q Consensus 77 ~~~~Pe~i~~d~~G~l~v~~~~G~I~~~~-~g~~-~-----------~~~-~~~g~L~v~~~~-~gl~~~~~-~g~~~l~ 140 (360)
.+..|.+|++|++|+||+++.+++|++++ ++.. . .+. ..+|+||+++.. .++++++. +......
T Consensus 65 ~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~ 144 (270)
T 1rwi_B 65 GLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL 144 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC
T ss_pred CcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee
Confidence 35789999999999999998888999998 5421 1 122 246789999865 56888873 3322221
Q ss_pred eccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEE-eCCCcCcceEEEecCCC
Q 018144 141 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDED 219 (360)
Q Consensus 141 ~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~-~~~l~~pngia~~~dg~ 219 (360)
. ...+..|++|+++++|++|+++.. .++|+++|++++..... ...+..|++++++++|.
T Consensus 145 ~---~~~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~ 204 (270)
T 1rwi_B 145 P---FTGLNDPDGVAVDNSGNVYVTDTD-----------------NNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGT 204 (270)
T ss_dssp C---CCSCCSCCCEEECTTCCEEEEEGG-----------------GTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCC
T ss_pred c---cccCCCceeEEEeCCCCEEEEECC-----------------CCEEEEEecCCCceEeecccCCCCceEEEECCCCC
Confidence 1 112357899999999999998753 46899999986655443 23457899999999995
Q ss_pred EEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 220 YVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 220 ~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
+|+++...++|.+|+.++.... .........|.++++|++|++|++...
T Consensus 205 -l~v~~~~~~~v~~~~~~~~~~~---~~~~~~~~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 205 -VYVTEHNTNQVVKLLAGSTTST---VLPFTGLNTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp -EEEEETTTSCEEEECTTCSCCE---ECCCCSCSCEEEEEECTTCCEEEEEGG
T ss_pred -EEEEECCCCcEEEEcCCCCcce---eeccCCCCCceeEEECCCCCEEEEECC
Confidence 9999988889999998664221 111111135899999999999999876
No 34
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.68 E-value=5e-15 Score=136.46 Aligned_cols=171 Identities=15% Similarity=0.188 Sum_probs=125.2
Q ss_pred CCCcceEEEcC-CCCEEEEe-cCCeEEEEE-CCee--e-E----------EEe--cCCeEEEEeCCC-cEEEEcCCC--e
Q 018144 78 VNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DGTW--V-N----------WKF--IDSHLIICDNAN-GLHKVSEDG--V 136 (360)
Q Consensus 78 ~~~Pe~i~~d~-~G~l~v~~-~~G~I~~~~-~g~~--~-~----------~~~--~~g~L~v~~~~~-gl~~~~~~g--~ 136 (360)
+..|.++.+|. ++.||+++ .+++|++++ +|.. + . ++. .+++||+++... .|.+++.+| .
T Consensus 34 ~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 113 (318)
T 3sov_A 34 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 113 (318)
T ss_dssp EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE
Confidence 56788888986 78999999 778999999 5431 1 1 122 367899999764 677777555 4
Q ss_pred EEEeeccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEE-eCCCcCcceEEE
Q 018144 137 ENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVAL 214 (360)
Q Consensus 137 ~~l~~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~-~~~l~~pngia~ 214 (360)
+.+.. ..+..|++|++|+ .|.||+||.+ ..++|++++++....+.+ ..++..|||+++
T Consensus 114 ~~l~~----~~~~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~l~~Pnglav 173 (318)
T 3sov_A 114 KVLFW----QELDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAGMDGSSRFIIINSEIYWPNGLTL 173 (318)
T ss_dssp EEEEC----SSCSSEEEEEEEGGGTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEEEE
T ss_pred EEEEe----CCCCCccEEEEeCCCCEEEEEecC----------------CCCEEEEEEcCCCCeEEEEECCCCCccEEEE
Confidence 44432 1245799999996 5799999854 246899999874444444 356889999999
Q ss_pred ecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 215 SRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 215 ~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
+++++.|||+++..++|.+++++|. ..+.+.....+.|+++++|.+ .+|++.+.
T Consensus 174 d~~~~~lY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~~P~glav~~~-~lywtd~~ 227 (318)
T 3sov_A 174 DYEEQKLYWADAKLNFIHKSNLDGT---NRQAVVKGSLPHPFALTLFED-ILYWTDWS 227 (318)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSCCSCEEEEEEETT-EEEEEETT
T ss_pred eccCCEEEEEECCCCEEEEEcCCCC---ceEEEecCCCCCceEEEEeCC-EEEEEecC
Confidence 9988899999999999999999873 233444333457999999865 67777766
No 35
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.65 E-value=2.4e-14 Score=133.82 Aligned_cols=242 Identities=16% Similarity=0.179 Sum_probs=152.5
Q ss_pred eEecCCCCCCcceEEEcCCCCEEEEecCCeEEEEECCeeeE----------------EEec-----CCeEEEEeCC----
Q 018144 71 IKVGEGSVNHPEDASMDKNGVIYTATRDGWIKRLQDGTWVN----------------WKFI-----DSHLIICDNA---- 125 (360)
Q Consensus 71 ~~~~~~~~~~Pe~i~~d~~G~l~v~~~~G~I~~~~~g~~~~----------------~~~~-----~g~L~v~~~~---- 125 (360)
+.+..+ +..|++|+++++|.||+++..|+|+++++|+.+. +... ++.|||++..
T Consensus 24 ~~va~~-l~~P~~ia~~pdG~l~V~e~~g~I~~i~~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~ 102 (352)
T 2ism_A 24 EEVVGG-LEVPWALAFLPDGGMLIAERPGRIRLFREGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGG 102 (352)
T ss_dssp EEEECC-CSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTS
T ss_pred EEEECC-CCCceEEEEcCCCeEEEEeCCCeEEEEECCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCC
Confidence 556554 7899999999999999999889999998443322 1222 2689998863
Q ss_pred --CcEEEEc-CCC-e---EEEeeccC--CccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCC
Q 018144 126 --NGLHKVS-EDG-V---ENFLSYVN--GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS 196 (360)
Q Consensus 126 --~gl~~~~-~~g-~---~~l~~~~~--~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t 196 (360)
..|.+++ .++ + +.+.+..+ ......+++|++++||+|||++...... ....+ .....|+|+|++++.
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~--~~~~d--~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 103 LRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYER--ELAQD--LASLGGKILRLTPEG 178 (352)
T ss_dssp SEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCG--GGGGC--TTCSSSEEEEECTTS
T ss_pred CccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCC--ccccC--CCCCceEEEEEcCCC
Confidence 5688888 433 2 23333333 2234678999999999999998542110 00000 123357999999974
Q ss_pred -------------CeEEEEeCCCcCcceEEEecCCCEEEEEeCCCCE--------EEEEEecCCcCcc------------
Q 018144 197 -------------NITTLVADGFYFANGVALSRDEDYVVVCESWKFR--------CRKYWLKGERKGK------------ 243 (360)
Q Consensus 197 -------------g~~~~~~~~l~~pngia~~~dg~~l~v~~t~~~~--------i~~~~~~g~~~~~------------ 243 (360)
...+.+..++..|+|+++++++..||+++.+.++ |.++.. |...+.
T Consensus 179 ~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~-G~nyGwp~~~g~~~~~~~ 257 (352)
T 2ism_A 179 EPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVP-GGNYGWPRVVGRGNDPRY 257 (352)
T ss_dssp SBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECT-TCBCCTTTCCSCCCCTTS
T ss_pred CCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEecc-CCcCCCCcccCCCCCCCC
Confidence 1345566778899999999944459999987765 555542 221110
Q ss_pred eeeecc-CCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC--CcE-
Q 018144 244 LETFAE-NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED--GTI- 319 (360)
Q Consensus 244 ~~~~~~-~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~--g~~- 319 (360)
...... .....|.++++ .+|++|++... .+.|.+++.+ +..
T Consensus 258 ~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~----------------------------------~~~v~~v~~~~~~~~~ 302 (352)
T 2ism_A 258 RDPLYFWPQGFPPGNLAF-FRGDLYVAGLR----------------------------------GQALLRLVLEGERGRW 302 (352)
T ss_dssp CCCSEECTTCCCEEEEEE-ETTEEEEEETT----------------------------------TTEEEEEEEEEETTEE
T ss_pred cCCeEecCCCCCCcceEE-ECCEEEEEECC----------------------------------CCEEEEEEECCCCcce
Confidence 000000 11125889999 57899999876 2467777643 321
Q ss_pred ----EEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCC----------eEEEE
Q 018144 320 ----IRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSN----------FIGKV 357 (360)
Q Consensus 320 ----~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~----------~i~~~ 357 (360)
.+.+-+. ...+..+... +|.||+.+...+ +|.|+
T Consensus 303 ~~~~~~~~~~~----~~rp~~v~~~pdG~lyv~~~~~~g~g~~~~~~~~i~ri 351 (352)
T 2ism_A 303 RVLRVETALSG----FGRLREVQVGPDGALYVTTSNRDGRGQVRPGDDRVLRL 351 (352)
T ss_dssp EEEEEEEEEES----SCCEEEEEECTTSCEEEEECSTTTTSCCCTTCSCEEEE
T ss_pred eecchheeccc----CCCeeEEEECCCCcEEEEEeCCCCCCCCCCCCCEEEEe
Confidence 1222221 2357778877 599999987643 78776
No 36
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.65 E-value=1.2e-14 Score=149.85 Aligned_cols=211 Identities=14% Similarity=0.164 Sum_probs=148.6
Q ss_pred cceEEEcCCCC-EEEEecCCeEEEEE--CCeeeEE----------------EecCCeEEEEeCCCcEEEEc-CCC-eEEE
Q 018144 81 PEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVNW----------------KFIDSHLIICDNANGLHKVS-EDG-VENF 139 (360)
Q Consensus 81 Pe~i~~d~~G~-l~v~~~~G~I~~~~--~g~~~~~----------------~~~~g~L~v~~~~~gl~~~~-~~g-~~~l 139 (360)
..+++.|++|. ||+|+.+++|++++ +++++.+ .+.+|+||+++. .|+++++ .++ ++.+
T Consensus 408 v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~ 486 (795)
T 4a2l_A 408 IKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTI 486 (795)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEEC
T ss_pred EEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEc
Confidence 45788999999 99999888899998 4544332 123688999997 8999999 566 6554
Q ss_pred eecc--CCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC-----CC--cCcc
Q 018144 140 LSYV--NGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-----GF--YFAN 210 (360)
Q Consensus 140 ~~~~--~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~-----~l--~~pn 210 (360)
.... .+.....+..+.+|++|+||++. . ++|+++|++++++ .+.. ++ ...+
T Consensus 487 ~~~~~~~~~~~~~i~~i~~d~~g~lWigt------------------~-~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~ 546 (795)
T 4a2l_A 487 EKEKDGTPVVSKQITTLFRDSHKRLWIGG------------------E-EGLSVFKQEGLDI-QKASILPVSNVTKLFTN 546 (795)
T ss_dssp CBCTTCCBCCCCCEEEEEECTTCCEEEEE------------------S-SCEEEEEEETTEE-EECCCSCSCGGGGSCEE
T ss_pred cccccccccCCceEEEEEECCCCCEEEEe------------------C-CceEEEeCCCCeE-EEecCCCCCCCCCCeeE
Confidence 3221 11112457789999999999952 2 5799999987776 4321 12 2346
Q ss_pred eEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCce----eEEcCCCCEEEEEecCchhHHHHhhcchh
Q 018144 211 GVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDN----INLAPDGTFWIAIIKLDARRMKILNSSKL 286 (360)
Q Consensus 211 gia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~----i~~d~~G~lwva~~~~~~~~~~~~~~~~~ 286 (360)
.++.+++|+ +|++... +|.+|+.+.. ..+.+. ...|+|++ +..|++|+||+++..
T Consensus 547 ~i~~d~~g~-lWigT~~--Gl~~~d~~~~---~~~~~~-~~~gl~~~~i~~i~~d~~g~lWi~t~~-------------- 605 (795)
T 4a2l_A 547 CIYEASNGI-IWVGTRE--GFYCFNEKDK---QIKRYN-TTNGLPNNVVYGILEDSFGRLWLSTNR-------------- 605 (795)
T ss_dssp EEEECTTSC-EEEEESS--CEEEEETTTT---EEEEEC-GGGTCSCSCEEEEEECTTSCEEEEETT--------------
T ss_pred EEEECCCCC-EEEEeCC--CceeECCCCC---cEEEeC-CCCCCchhheEEEEECCCCCEEEEcCC--------------
Confidence 788888887 7777653 6999997543 333332 22345554 778999999999965
Q ss_pred HHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCcccce--eeEEEE-CCEEEEEeCCCCeEEEE
Q 018144 287 IKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFV--TSGLQV-DNHLYVISLTSNFIGKV 357 (360)
Q Consensus 287 ~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~--t~~~~~-~g~Lylgs~~~~~i~~~ 357 (360)
+|.+++++...+..|...+|.+...+ .++... +|+||+|+..+ +.++
T Consensus 606 ----------------------Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~G--l~~~ 655 (795)
T 4a2l_A 606 ----------------------GISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGING--ITTF 655 (795)
T ss_dssp ----------------------EEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEEETTE--EEEE
T ss_pred ----------------------ceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEEecCCc--eEEE
Confidence 89999999888888988788755554 344444 59999999754 4444
No 37
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.64 E-value=1.9e-13 Score=125.93 Aligned_cols=184 Identities=11% Similarity=0.091 Sum_probs=136.1
Q ss_pred cCCeEEEEeCCC-cEEEEcCCC--e-EEEeeccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEE
Q 018144 115 IDSHLIICDNAN-GLHKVSEDG--V-ENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQL 189 (360)
Q Consensus 115 ~~g~L~v~~~~~-gl~~~~~~g--~-~~l~~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l 189 (360)
.+++||++|... .|.+++.+| . +.+... .+..|.++++|. +|+||++|.. .++|
T Consensus 45 ~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~----~l~~p~glavd~~~g~ly~~d~~-----------------~~~I 103 (318)
T 3sov_A 45 SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS----GLLSPDGLACDWLGEKLYWTDSE-----------------TNRI 103 (318)
T ss_dssp GGTEEEEEETTTTEEEEEETTSSSCCCEEEEE----CCSCCCEEEEETTTTEEEEEETT-----------------TTEE
T ss_pred CCCEEEEEECCCCcEEEEEccCCCceEEEEcC----CCCCccEEEEEcCCCeEEEEECC-----------------CCEE
Confidence 368999999764 577787433 2 222211 135689999995 7799999865 4689
Q ss_pred EEEcCCCCeEEEEe-CCCcCcceEEEecCCCEEEEEeCC-CCEEEEEEecCCcCcceeeeccCCCCCCceeEEcC-CCCE
Q 018144 190 LKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCESW-KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTF 266 (360)
Q Consensus 190 ~~~d~~tg~~~~~~-~~l~~pngia~~~dg~~l~v~~t~-~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~-~G~l 266 (360)
.++++++...+.+. ..+..|+|+++++++..|||++.+ ..+|++++++|.. .+.+....-..|++|++|+ +|+|
T Consensus 104 ~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~~~l~~Pnglavd~~~~~l 180 (318)
T 3sov_A 104 EVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS---RFIIINSEIYWPNGLTLDYEEQKL 180 (318)
T ss_dssp EEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEE
T ss_pred EEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC---eEEEEECCCCCccEEEEeccCCEE
Confidence 99998754444444 678899999999987789999975 6899999998742 2233222234699999996 6789
Q ss_pred EEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEECCEEEE
Q 018144 267 WIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYV 346 (360)
Q Consensus 267 wva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lyl 346 (360)
|++... .+.|.+++.+|...+.+.... ...+.++..+++.||+
T Consensus 181 Y~aD~~----------------------------------~~~I~~~d~dG~~~~~~~~~~---~~~P~glav~~~~lyw 223 (318)
T 3sov_A 181 YWADAK----------------------------------LNFIHKSNLDGTNRQAVVKGS---LPHPFALTLFEDILYW 223 (318)
T ss_dssp EEEETT----------------------------------TTEEEEEETTSCSCEEEECSC---CSCEEEEEEETTEEEE
T ss_pred EEEECC----------------------------------CCEEEEEcCCCCceEEEecCC---CCCceEEEEeCCEEEE
Confidence 999876 358999999886655554322 3567778888899999
Q ss_pred EeCCCCeEEEEeC
Q 018144 347 ISLTSNFIGKVQL 359 (360)
Q Consensus 347 gs~~~~~i~~~~l 359 (360)
....+++|.+++.
T Consensus 224 td~~~~~V~~~~~ 236 (318)
T 3sov_A 224 TDWSTHSILACNK 236 (318)
T ss_dssp EETTTTEEEEEET
T ss_pred EecCCCeEEEEEC
Confidence 9999999999874
No 38
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.64 E-value=5.9e-14 Score=133.41 Aligned_cols=211 Identities=9% Similarity=0.121 Sum_probs=147.3
Q ss_pred CCCCEEEEecCCeEEEEE-CCe-ee----------EEEe--cCCeEEEEeCC-CcEEEEcCCC------eEEEeeccCCc
Q 018144 88 KNGVIYTATRDGWIKRLQ-DGT-WV----------NWKF--IDSHLIICDNA-NGLHKVSEDG------VENFLSYVNGS 146 (360)
Q Consensus 88 ~~G~l~v~~~~G~I~~~~-~g~-~~----------~~~~--~~g~L~v~~~~-~gl~~~~~~g------~~~l~~~~~~~ 146 (360)
+...|+++. ...|.+++ ++. .. .+.. .+++||++|.. +.|++++.+| .+.+.. .
T Consensus 82 ~~~~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~----~ 156 (400)
T 3p5b_L 82 SIAYLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS----R 156 (400)
T ss_dssp TSCEEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC----S
T ss_pred ccceeEEec-cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe----C
Confidence 344555554 35677777 432 11 1222 36889999976 4577777332 222221 1
Q ss_pred cccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe-CCCcCcceEEEecCCCEEEEE
Q 018144 147 KLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVC 224 (360)
Q Consensus 147 ~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~-~~l~~pngia~~~dg~~l~v~ 224 (360)
.+..|.+|++|. .|+||++|.. .++|.++++++...+.+. ..+..|++|++++.+..|||+
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~-----------------~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~t 219 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWT 219 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETT-----------------TTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEE
T ss_pred CCCCcccEEEEecCCceEEEECC-----------------CCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEE
Confidence 235789999997 7899999865 468999999865555444 478889999999987789999
Q ss_pred eCCC-CEEEEEEecCCcCcceeeeccCCCCCCceeEEcC-CCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccc
Q 018144 225 ESWK-FRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFI 302 (360)
Q Consensus 225 ~t~~-~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 302 (360)
+.+. .+|.+++++|.. ...+....-..|.+|++|. +++||++...
T Consensus 220 d~~~~~~I~~~~~dG~~---~~~~~~~~l~~P~glavd~~~~~lY~aD~~------------------------------ 266 (400)
T 3p5b_L 220 DWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSK------------------------------ 266 (400)
T ss_dssp ECSSSCCEEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEETT------------------------------
T ss_pred eCCCCCEEEEEeCCCCc---cEEEEECCCCceEEEEEEeCCCEEEEEECC------------------------------
Confidence 9763 789999998742 2233222234699999995 6689999876
Q ss_pred cCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCCCCeEEEEe
Q 018144 303 TLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 358 (360)
Q Consensus 303 ~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~~~i~~~~ 358 (360)
...|.+++.+|...+.+....+ .+..+.++..++++||+....+++|.+++
T Consensus 267 ----~~~I~~~d~dG~~~~~~~~~~~-~l~~P~gl~v~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 267 ----LHSISSIDVNGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp ----TTEEEEEETTSCCCEEEEECSS-TTSSEEEEEEETTEEEEEESSSCSEEEEE
T ss_pred ----CCEEEEEeCCCCccEEEEeCCC-CCCCCEEEEEeCCEEEEecCCCCeEEEEE
Confidence 3589999998876555543222 24567788888899999999999999886
No 39
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.63 E-value=1.3e-14 Score=134.08 Aligned_cols=180 Identities=11% Similarity=0.128 Sum_probs=124.1
Q ss_pred ecCCCCCCcceEEEcCCCCEEEEe-cCCeEEEEE-CCe---ee-------------------EEEe-c-CCeEEEEeC--
Q 018144 73 VGEGSVNHPEDASMDKNGVIYTAT-RDGWIKRLQ-DGT---WV-------------------NWKF-I-DSHLIICDN-- 124 (360)
Q Consensus 73 ~~~~~~~~Pe~i~~d~~G~l~v~~-~~G~I~~~~-~g~---~~-------------------~~~~-~-~g~L~v~~~-- 124 (360)
...+.+..|.+|++|++|+||+++ .+++|++++ +|+ .. .+.. + +|+|||++.
T Consensus 85 ~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~ 164 (329)
T 3fvz_A 85 SGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC 164 (329)
T ss_dssp ECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS
T ss_pred cCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC
Confidence 334557899999999999999998 678999999 654 11 1222 3 689999995
Q ss_pred CCcEEEEcCCC--eEEEeeccC-----CccccccccEEEcCC-CcEEEEeCCCCCCCccceecccccCCccEEEEEcCCC
Q 018144 125 ANGLHKVSEDG--VENFLSYVN-----GSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS 196 (360)
Q Consensus 125 ~~gl~~~~~~g--~~~l~~~~~-----~~~~~~~n~l~~d~d-G~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t 196 (360)
.+.+.+++.+| ...+..... ...+..|++|++|++ |+||++|.. +++|.+||+++
T Consensus 165 ~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~-----------------~~~I~~~~~~~ 227 (329)
T 3fvz_A 165 NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE-----------------NGRIQCFKTDT 227 (329)
T ss_dssp CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTT
T ss_pred CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC-----------------CCEEEEEECCC
Confidence 46788888777 444432211 124567999999998 899999865 56899999987
Q ss_pred CeEEEEeC---CCcCcceEEEec------CCCEEEEEeCCCCEEEEEEecCCcCcceeeec--cCCCCCCceeEEcCCCC
Q 018144 197 NITTLVAD---GFYFANGVALSR------DEDYVVVCESWKFRCRKYWLKGERKGKLETFA--ENLPGAPDNINLAPDGT 265 (360)
Q Consensus 197 g~~~~~~~---~l~~pngia~~~------dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~--~~~~g~pd~i~~d~~G~ 265 (360)
|++..... ....+.+++++| +|+ +|+++....+|.+++....+ ....+. ......|.++++|++|+
T Consensus 228 G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~-~~v~~~~~~~v~~~~~~~g~--~~~~~~~~~~~~~~p~~ia~~~dG~ 304 (329)
T 3fvz_A 228 KEFVREIKHASFGRNVFAISYIPGFLFAVNGK-PYFGDQEPVQGFVMNFSSGE--IIDVFKPVRKHFDMPHDIVASEDGT 304 (329)
T ss_dssp CCEEEEECCTTTTTCEEEEEEETTEEEEEECC-CCTTCSCCCCEEEEETTTCC--EEEEECCSSSCCSSEEEEEECTTSE
T ss_pred CcEEEEEeccccCCCcceeeecCCEEEEeCCC-EEeccCCCcEEEEEEcCCCe--EEEEEcCCCCccCCeeEEEECCCCC
Confidence 77654332 122344555555 665 66666667789999865322 122221 11223699999999999
Q ss_pred EEEEEec
Q 018144 266 FWIAIIK 272 (360)
Q Consensus 266 lwva~~~ 272 (360)
+||+...
T Consensus 305 lyvad~~ 311 (329)
T 3fvz_A 305 VYIGDAH 311 (329)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 9999876
No 40
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.63 E-value=5.2e-14 Score=141.03 Aligned_cols=175 Identities=14% Similarity=0.127 Sum_probs=134.0
Q ss_pred ecCCCCCCcceEEEcC-CCCEEEEe-cCCeEEEEE-CCe-eeE-----------EEe--cCCeEEEEeCCC-cEEEEcCC
Q 018144 73 VGEGSVNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DGT-WVN-----------WKF--IDSHLIICDNAN-GLHKVSED 134 (360)
Q Consensus 73 ~~~~~~~~Pe~i~~d~-~G~l~v~~-~~G~I~~~~-~g~-~~~-----------~~~--~~g~L~v~~~~~-gl~~~~~~ 134 (360)
++...+..|.+|++|. +|.||+++ .+++|+|++ +|. .+. ++. .+++||+++... .|.+++.+
T Consensus 31 ~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d 110 (628)
T 4a0p_A 31 IPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLD 110 (628)
T ss_dssp CCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecC
Confidence 4444478999999996 78999999 789999998 652 222 222 357899999875 56666655
Q ss_pred C--eEEEeeccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcce
Q 018144 135 G--VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANG 211 (360)
Q Consensus 135 g--~~~l~~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~png 211 (360)
| .+.+.. ..+..|++|++|+ +|.||+||.+ ..++|.+++++....+.+..++..|+|
T Consensus 111 G~~~~~l~~----~~l~~P~~iavdp~~G~lY~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~~~P~G 170 (628)
T 4a0p_A 111 GQHRQVLVW----KDLDSPRALALDPAEGFMYWTEWG----------------GKPKIDRAAMDGSERTTLVPNVGRANG 170 (628)
T ss_dssp STTCEEEEC----SSCCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSCSSEEE
T ss_pred CCcEEEEEe----CCCCCcccEEEccCCCeEEEeCCC----------------CCCEEEEEeCCCCceEEEECCCCCcce
Confidence 6 445532 2245799999996 7899999854 146899999986666777788999999
Q ss_pred EEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 212 VALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 212 ia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
++++++++.|||+++..++|.+++++|... +++...+ ..|.+++++. +++|++.+.
T Consensus 171 lalD~~~~~LY~aD~~~~~I~~~d~dG~~~---~v~~~~l-~~P~glav~~-~~ly~tD~~ 226 (628)
T 4a0p_A 171 LTIDYAKRRLYWTDLDTNLIESSNMLGLNR---EVIADDL-PHPFGLTQYQ-DYIYWTDWS 226 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEEECC-SCEEEEEEET-TEEEEEETT
T ss_pred EEEccccCEEEEEECCCCEEEEEcCCCCce---EEeeccC-CCceEEEEEC-CEEEEecCC
Confidence 999999889999999999999999987432 3444433 3699999997 689999875
No 41
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.62 E-value=1.6e-13 Score=140.44 Aligned_cols=216 Identities=9% Similarity=0.111 Sum_probs=150.4
Q ss_pred eEEEcCCCCEEEEecCCeEEEEE-CC-eee----------EEEe--cCCeEEEEeCCC-cEEEEcCCC------eEEEee
Q 018144 83 DASMDKNGVIYTATRDGWIKRLQ-DG-TWV----------NWKF--IDSHLIICDNAN-GLHKVSEDG------VENFLS 141 (360)
Q Consensus 83 ~i~~d~~G~l~v~~~~G~I~~~~-~g-~~~----------~~~~--~~g~L~v~~~~~-gl~~~~~~g------~~~l~~ 141 (360)
+.+++....|+++.. ..|.+++ ++ ... .+.. .+++||+++... .|++++.+| .+.+.
T Consensus 389 C~~~~~~p~Ll~an~-~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi- 466 (791)
T 3m0c_C 389 CKAVGSIAYLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI- 466 (791)
T ss_dssp CEETTSCCEEEEECB-SSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-
T ss_pred eeecccccccccccc-cceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEE-
Confidence 334444556666653 3477776 32 221 2222 368899999874 577777322 22222
Q ss_pred ccCCccccccccEEEcCCC-cEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe-CCCcCcceEEEecCCC
Q 018144 142 YVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDED 219 (360)
Q Consensus 142 ~~~~~~~~~~n~l~~d~dG-~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~-~~l~~pngia~~~dg~ 219 (360)
...+..|.+|++|..+ +||++|.. .++|.++++++...+.+. ..+..|+||++++.+.
T Consensus 467 ---~~~l~~P~GLAvD~~~~~LY~tD~~-----------------~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g 526 (791)
T 3m0c_C 467 ---SRDIQAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG 526 (791)
T ss_dssp ---CSSCSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTT
T ss_pred ---ecCCCCcceeeeeecCCcEEEEecC-----------------CCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCC
Confidence 1224679999999755 89999865 468999998855555444 5788899999999877
Q ss_pred EEEEEeCCC-CEEEEEEecCCcCcceeeeccCCCCCCceeEEc-CCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCcc
Q 018144 220 YVVVCESWK-FRCRKYWLKGERKGKLETFAENLPGAPDNINLA-PDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 297 (360)
Q Consensus 220 ~l~v~~t~~-~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d-~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 297 (360)
.|||++++. .+|.+++++|.. ..++.......|.+|++| .+|+||++...
T Consensus 527 ~LYwtD~g~~~~I~~~~~dG~~---~~~lv~~~l~~P~GLavD~~~~~LYwaD~~------------------------- 578 (791)
T 3m0c_C 527 FMYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSK------------------------- 578 (791)
T ss_dssp EEEEEECSSSCEEEEEETTSCC---EEEEECSSCSCEEEEEEETTTTEEEEEETT-------------------------
T ss_pred CEEEecCCCCCeEEEEecCCCc---eEEEEeCCCCCceEEEEecCCCeEEEEeCC-------------------------
Confidence 899999876 899999998742 223332333469999999 57789999876
Q ss_pred ccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCCCCeEEEEe
Q 018144 298 FSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 358 (360)
Q Consensus 298 ~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~~~i~~~~ 358 (360)
...|.+++.+|.....+....+ .+..+.++...+++||++...+++|.+++
T Consensus 579 ---------~~~I~~~d~dG~~~~~v~~~~~-~l~~P~glav~~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 579 ---------LHSISSIDVNGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp ---------TTEEEEEETTSCSCEEEEECTT-TTSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ---------CCcEEEEecCCCceEEEecCCC-ccCCCCEEEEeCCEEEEEECCCCEEEEEe
Confidence 3589999998876555543322 24567778888899999999999999886
No 42
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.61 E-value=1.5e-13 Score=130.67 Aligned_cols=171 Identities=14% Similarity=0.131 Sum_probs=123.6
Q ss_pred CCCcceEEEcC-CCCEEEEe-cCCeEEEEE-CC-----eeeE-----------EEe--cCCeEEEEeCCC-cEEEEcCCC
Q 018144 78 VNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DG-----TWVN-----------WKF--IDSHLIICDNAN-GLHKVSEDG 135 (360)
Q Consensus 78 ~~~Pe~i~~d~-~G~l~v~~-~~G~I~~~~-~g-----~~~~-----------~~~--~~g~L~v~~~~~-gl~~~~~~g 135 (360)
+..|.+|++|. ++.||+++ .+++|++++ +| ..+. ++. .+++||+++... .|.+++.+|
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 68999999995 78999999 678999998 54 1111 222 268899999774 566777555
Q ss_pred --eEEEeeccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEE-eCCCcCcce
Q 018144 136 --VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANG 211 (360)
Q Consensus 136 --~~~l~~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~-~~~l~~png 211 (360)
.+.+... .+..|++|++|+ +|.||+||.. ..++|.+++.+....+.+ ..++..|||
T Consensus 191 ~~~~~l~~~----~~~~P~~iavdp~~g~ly~td~~----------------~~~~I~~~~~dG~~~~~~~~~~l~~P~g 250 (400)
T 3p5b_L 191 VKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPNG 250 (400)
T ss_dssp CSEEEEEEC----SSCCEEEEEEETTTTEEEEEECS----------------SSCCEEEEETTSCSCEEEECSSCSCEEE
T ss_pred CceEEEEeC----CCCCcceEEEecccCeEEEEeCC----------------CCCEEEEEeCCCCccEEEEECCCCceEE
Confidence 4444321 235699999997 6799999864 135799999875444444 356889999
Q ss_pred EEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccC--CCCCCceeEEcCCCCEEEEEec
Q 018144 212 VALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN--LPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 212 ia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~--~~g~pd~i~~d~~G~lwva~~~ 272 (360)
|+++++++.|||+++..++|.+++++|.. .+.+... ....|.+++++.+ ++|++.+.
T Consensus 251 lavd~~~~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~l~~P~gl~v~~~-~lywtd~~ 309 (400)
T 3p5b_L 251 ITLDLLSGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFED-KVFWTDII 309 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCC---CEEEEECSSTTSSEEEEEEETT-EEEEEESS
T ss_pred EEEEeCCCEEEEEECCCCEEEEEeCCCCc---cEEEEeCCCCCCCCEEEEEeCC-EEEEecCC
Confidence 99999888999999999999999998742 2233222 2346999999654 67777766
No 43
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.58 E-value=2.6e-13 Score=122.03 Aligned_cols=190 Identities=14% Similarity=0.201 Sum_probs=135.3
Q ss_pred ecCCeEEEEeCC-CcEEEEcCCC--eEEEeecc-CCccccccccEEE-cCCCcEEEEeCCCCCCCccceecccccCCccE
Q 018144 114 FIDSHLIICDNA-NGLHKVSEDG--VENFLSYV-NGSKLRFANDVVE-ASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQ 188 (360)
Q Consensus 114 ~~~g~L~v~~~~-~gl~~~~~~g--~~~l~~~~-~~~~~~~~n~l~~-d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~ 188 (360)
..+|+|||++.. +++.+++.++ ...+.... ....+..|.++++ +++|++|+++.. ..++
T Consensus 38 ~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~----------------~~~~ 101 (286)
T 1q7f_A 38 NAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS----------------PTHQ 101 (286)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG----------------GGCE
T ss_pred CCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC----------------CCCE
Confidence 346889999765 5688888556 44443211 1123457899999 589999998742 1468
Q ss_pred EEEEcCCCCeEEEEe-CCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeecc-CCCCCCceeEEcCCCCE
Q 018144 189 LLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAE-NLPGAPDNINLAPDGTF 266 (360)
Q Consensus 189 l~~~d~~tg~~~~~~-~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~-~~~g~pd~i~~d~~G~l 266 (360)
|.++|++......+. .....|++++++++|+ +|+++...++|.+|+.++... ..+.. .....|.++++|++|++
T Consensus 102 i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~~---~~~~~~~~~~~p~~i~~~~~g~l 177 (286)
T 1q7f_A 102 IQIYNQYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNGNVL---HKFGCSKHLEFPNGVVVNDKQEI 177 (286)
T ss_dssp EEEECTTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTSCEE---EEEECTTTCSSEEEEEECSSSEE
T ss_pred EEEECCCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCCCEE---EEeCCCCccCCcEEEEECCCCCE
Confidence 999997633333332 2356899999999997 999998888999999765322 22221 12235899999999999
Q ss_pred EEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEE-CCEEE
Q 018144 267 WIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLY 345 (360)
Q Consensus 267 wva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Ly 345 (360)
|++... .+.|.+++++|+.+..+... |. +..+.++..+ +|+||
T Consensus 178 ~v~~~~----------------------------------~~~i~~~~~~g~~~~~~~~~-g~-~~~p~~i~~d~~G~l~ 221 (286)
T 1q7f_A 178 FISDNR----------------------------------AHCVKVFNYEGQYLRQIGGE-GI-TNYPIGVGINSNGEIL 221 (286)
T ss_dssp EEEEGG----------------------------------GTEEEEEETTCCEEEEESCT-TT-SCSEEEEEECTTCCEE
T ss_pred EEEECC----------------------------------CCEEEEEcCCCCEEEEEccC-Cc-cCCCcEEEECCCCCEE
Confidence 999865 35899999999988777543 21 3467788877 58999
Q ss_pred EEeCCCC-eEEEEeC
Q 018144 346 VISLTSN-FIGKVQL 359 (360)
Q Consensus 346 lgs~~~~-~i~~~~l 359 (360)
+++..++ .|.+++.
T Consensus 222 v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 222 IADNHNNFNLTIFTQ 236 (286)
T ss_dssp EEECSSSCEEEEECT
T ss_pred EEeCCCCEEEEEECC
Confidence 9998887 8988864
No 44
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.58 E-value=8.6e-14 Score=142.81 Aligned_cols=214 Identities=13% Similarity=0.174 Sum_probs=138.3
Q ss_pred cceEEEcCCCCEEEEecCCeEEEEE--CC---ee-----------------eE-EEecCCeEEEEeCCCcEEEEc-CCC-
Q 018144 81 PEDASMDKNGVIYTATRDGWIKRLQ--DG---TW-----------------VN-WKFIDSHLIICDNANGLHKVS-EDG- 135 (360)
Q Consensus 81 Pe~i~~d~~G~l~v~~~~G~I~~~~--~g---~~-----------------~~-~~~~~g~L~v~~~~~gl~~~~-~~g- 135 (360)
-.+|+.|++|.||+|+. +++++++ ++ .+ .. +.+.+|+|||++ ..||.+++ .++
T Consensus 326 v~~i~~D~~g~lWiGt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt-~~GL~~~~~~~~~ 403 (758)
T 3ott_A 326 FYSLFRDSKGFYWFGGA-NGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIAT-DGSINRYDYATRQ 403 (758)
T ss_dssp EEEEEECTTCCEEEEET-TEEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEE-TTEEEEEETTTTE
T ss_pred EEEEEEcCCCCEEEeeC-CcceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEe-CCcHhhcCcCCCc
Confidence 35788999999999995 4688886 22 11 11 223478999999 56999999 667
Q ss_pred eEEEeec-cCC-ccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCC------CeEE---EE--
Q 018144 136 VENFLSY-VNG-SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS------NITT---LV-- 202 (360)
Q Consensus 136 ~~~l~~~-~~~-~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t------g~~~---~~-- 202 (360)
++.+... ..+ .....+..+..|++|+||++. ..++|+++|+++ +.+. .+
T Consensus 404 ~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT------------------~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 465 (758)
T 3ott_A 404 FIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIST------------------CLGGIFVVDKHKLMQSTSGQYIAEQNYSV 465 (758)
T ss_dssp EEEEEEECCC--CBSSSEEEEEECTTSEEEEEE------------------SSSCEEEEEHHHHHHCCSSEEECSEEECG
T ss_pred EEEeecCCCcCCCCCceEEEEEEcCCCCEEEEE------------------CCCceEEEccccccccCCcceeccccccc
Confidence 6665321 111 122456788999999999953 345799998652 2221 11
Q ss_pred eCCCc--CcceEEEecCCCEEEE-EeCCCCEEEEEEecCCcCcceeeec-cCCC--CCCceeEEcCCCCEEEEEecCchh
Q 018144 203 ADGFY--FANGVALSRDEDYVVV-CESWKFRCRKYWLKGERKGKLETFA-ENLP--GAPDNINLAPDGTFWIAIIKLDAR 276 (360)
Q Consensus 203 ~~~l~--~pngia~~~dg~~l~v-~~t~~~~i~~~~~~g~~~~~~~~~~-~~~~--g~pd~i~~d~~G~lwva~~~~~~~ 276 (360)
..++. ..+.+..+++|+ +|+ +.+ .++|.+|+++.. ..+.+. +.+. ..+..+..|.+|+||+++..
T Consensus 466 ~~~l~~~~i~~i~~d~~g~-lWi~~~t-~~Gl~~~d~~~~---~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~~---- 536 (758)
T 3ott_A 466 HNGLSGMFINQIIPDNEGN-VWVLLYN-NKGIDKINPRTR---EVTKLFADELTGEKSPNYLLCDEDGLLWVGFHG---- 536 (758)
T ss_dssp GGTCSCSCEEEEEECTTSC-EEEEETT-CSSEEEEETTTT---EEEEECTTTSCGGGCEEEEEECTTSCEEEEETT----
T ss_pred ccccccceeeeEEEcCCCC-EEEEccC-CCCcEEEeCCCC---ceEEecCCCcCCCcccceEEECCCCCEEEEecC----
Confidence 11222 356788888887 777 344 357999997543 233332 1111 23567889999999999854
Q ss_pred HHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCCCCeEEE
Q 018144 277 RMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGK 356 (360)
Q Consensus 277 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~~~i~~ 356 (360)
++.+++++...+..+. .+|.+.+.+.++.+++|+||+++. +-|.+
T Consensus 537 --------------------------------Gl~~~~~~~~~~~~~~-~~gl~~~~i~~i~~~~g~lWi~t~--~Gl~~ 581 (758)
T 3ott_A 537 --------------------------------GVMRINPKDESQQSIS-FGSFSNNEILSMTCVKNSIWVSTT--NGLWI 581 (758)
T ss_dssp --------------------------------EEEEECC--CCCCBCC-CCC---CCEEEEEEETTEEEEEES--SCEEE
T ss_pred --------------------------------ceEEEecCCCceEEec-ccCCCccceEEEEECCCCEEEECC--CCeEE
Confidence 7999998766555553 356656678888888899999994 44666
Q ss_pred Ee
Q 018144 357 VQ 358 (360)
Q Consensus 357 ~~ 358 (360)
++
T Consensus 582 ~~ 583 (758)
T 3ott_A 582 ID 583 (758)
T ss_dssp EE
T ss_pred Ec
Confidence 65
No 45
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.58 E-value=3.1e-13 Score=123.00 Aligned_cols=178 Identities=12% Similarity=0.144 Sum_probs=119.5
Q ss_pred CCCCcceEEEcC-CCCEEEEe-cCCeEEEEE-C-CeeeE------------------EEe----cCCeEEEE-eC-----
Q 018144 77 SVNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-D-GTWVN------------------WKF----IDSHLIIC-DN----- 124 (360)
Q Consensus 77 ~~~~Pe~i~~d~-~G~l~v~~-~~G~I~~~~-~-g~~~~------------------~~~----~~g~L~v~-~~----- 124 (360)
+-.-||++.+|+ +|.+|+++ .+|.|.+++ + +..+. +.. ..|+|||+ +.
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 346899999986 89999999 899999998 4 43211 122 46789984 31
Q ss_pred --------CCcEEEEc-C---CC-eEEEeec--cC-------CccccccccEEEcCCCcEEEEeCCCCCCCccceecccc
Q 018144 125 --------ANGLHKVS-E---DG-VENFLSY--VN-------GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILE 182 (360)
Q Consensus 125 --------~~gl~~~~-~---~g-~~~l~~~--~~-------~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~ 182 (360)
...++++| . ++ ....+.. .. +.....+|+|++|++|++||+|+.
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~-------------- 156 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFAL-------------- 156 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEE--------------
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCC--------------
Confidence 35688999 6 56 4333321 11 112346999999999999999864
Q ss_pred cCCc-cEEEEEcCCCCeEEEEe------CCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeee--cc-CCC
Q 018144 183 GKPH-GQLLKYDPSSNITTLVA------DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETF--AE-NLP 252 (360)
Q Consensus 183 ~~~~-g~l~~~d~~tg~~~~~~------~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~--~~-~~~ 252 (360)
. +.|++++++......+. .....+|||+++|||+.|++.++ .++|++|+++.........- .. ...
T Consensus 157 ---~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~ 232 (334)
T 2p9w_A 157 ---GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTL 232 (334)
T ss_dssp ---SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCC
T ss_pred ---CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccc
Confidence 3 67999999844444332 12345889999999999999998 88999999873211001110 10 011
Q ss_pred CCCcee-EEcCCCCE-EEEEec
Q 018144 253 GAPDNI-NLAPDGTF-WIAIIK 272 (360)
Q Consensus 253 g~pd~i-~~d~~G~l-wva~~~ 272 (360)
..||+| ....+|++ +|+...
T Consensus 233 ~~~dgilp~~~~G~vllV~~~~ 254 (334)
T 2p9w_A 233 SGTEKIVTVPVGNESVLVGARA 254 (334)
T ss_dssp TTEEEEEEEEETTEEEEEEEET
T ss_pred cCcccccccccCCEEEEEEcCC
Confidence 258896 56778987 776654
No 46
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.57 E-value=9.5e-14 Score=127.71 Aligned_cols=166 Identities=15% Similarity=0.101 Sum_probs=116.4
Q ss_pred CCcceEEEcC-CCCEEEEecCCeEEEEE-C-CeeeEE----------------Eec-CCeEEEEeCC-------------
Q 018144 79 NHPEDASMDK-NGVIYTATRDGWIKRLQ-D-GTWVNW----------------KFI-DSHLIICDNA------------- 125 (360)
Q Consensus 79 ~~Pe~i~~d~-~G~l~v~~~~G~I~~~~-~-g~~~~~----------------~~~-~g~L~v~~~~------------- 125 (360)
..|.+|++|+ +|+||+++..++|++++ + ++.+.+ ... +|+|||++..
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred CCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehc
Confidence 4799999996 89999999777799998 4 433221 124 6899999864
Q ss_pred -----CcEEEEc-CCC-eEEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCC-
Q 018144 126 -----NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS- 196 (360)
Q Consensus 126 -----~gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t- 196 (360)
.++++++ .++ ++.+... +..|++|+++++|+ ||++|.. .++|++|+.++
T Consensus 160 ~~~~~g~v~~~d~~~~~~~~~~~~-----~~~p~gia~~~dg~~lyv~d~~-----------------~~~I~~~~~~~~ 217 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTKETTLLLKE-----LHVPGGAEVSADSSFVLVAEFL-----------------SHQIVKYWLEGP 217 (322)
T ss_dssp HTCCCEEEEEEETTTTEEEEEEEE-----ESCCCEEEECTTSSEEEEEEGG-----------------GTEEEEEESSST
T ss_pred ccCCCceEEEEeCCCCEEEEeccC-----CccCcceEECCCCCEEEEEeCC-----------------CCeEEEEECCCC
Confidence 3588888 456 5554332 35799999999986 9999754 46899998764
Q ss_pred --CeEEEEeCCCcCcceEEEecCCCEEEEEeCC----------CCEEEEEEecCCcCcceeeeccC--C-CCCCceeEEc
Q 018144 197 --NITTLVADGFYFANGVALSRDEDYVVVCESW----------KFRCRKYWLKGERKGKLETFAEN--L-PGAPDNINLA 261 (360)
Q Consensus 197 --g~~~~~~~~l~~pngia~~~dg~~l~v~~t~----------~~~i~~~~~~g~~~~~~~~~~~~--~-~g~pd~i~~d 261 (360)
++.+.+.. +..|.|++++++|+ +||++.. .++|.+|+.+|... ..+... . ...|.+++.
T Consensus 218 ~~~~~~~~~~-~~gP~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~---~~~~~~~g~~~~~~~~~~~- 291 (322)
T 2fp8_A 218 KKGTAEVLVK-IPNPGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGNIL---EVIPLPPPFAGEHFEQIQE- 291 (322)
T ss_dssp TTTCEEEEEE-CSSEEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSCEE---EEEECCTTTTTSCCCEEEE-
T ss_pred cCCccceEEe-CCCCCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCCEE---EEEECCCCCccccceEEEE-
Confidence 34444332 22399999999997 8999865 46799999876432 223211 1 124677766
Q ss_pred CCCCEEEEEec
Q 018144 262 PDGTFWIAIIK 272 (360)
Q Consensus 262 ~~G~lwva~~~ 272 (360)
.+|+|||+...
T Consensus 292 ~~g~L~v~~~~ 302 (322)
T 2fp8_A 292 HDGLLYIGTLF 302 (322)
T ss_dssp ETTEEEEECSS
T ss_pred eCCEEEEeecC
Confidence 47899999765
No 47
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.57 E-value=6.7e-13 Score=132.85 Aligned_cols=175 Identities=16% Similarity=0.159 Sum_probs=128.3
Q ss_pred cCCCCCCcceEEEcC-CCCEEEEe-cCCeEEEEE-CCe-eeE-----------EEe--cCCeEEEEeCCCc-EEEEcCCC
Q 018144 74 GEGSVNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DGT-WVN-----------WKF--IDSHLIICDNANG-LHKVSEDG 135 (360)
Q Consensus 74 ~~~~~~~Pe~i~~d~-~G~l~v~~-~~G~I~~~~-~g~-~~~-----------~~~--~~g~L~v~~~~~g-l~~~~~~g 135 (360)
+...+..|.+|++|. +|.||+++ ..+.|+|++ +|. .+. ++. .+++||+++...+ |.+++.+|
T Consensus 344 ~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G 423 (619)
T 3s94_A 344 QLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNG 423 (619)
T ss_dssp CCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred eccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCC
Confidence 334467899999996 78999999 688999999 652 222 222 3678999998754 55555556
Q ss_pred --eEEEeeccCCccccccccEEEcCC-CcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe-CCCcCcce
Q 018144 136 --VENFLSYVNGSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANG 211 (360)
Q Consensus 136 --~~~l~~~~~~~~~~~~n~l~~d~d-G~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~-~~l~~png 211 (360)
.+.+.. ..+..|++|++|+. |.||+||.+ ...+|.+.+.+....+.+. ..+..|||
T Consensus 424 ~~~~~l~~----~~l~~P~~iavdp~~G~ly~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~l~~P~G 483 (619)
T 3s94_A 424 TMRKILIS----EDLEEPRAIVLDPMVGYMYWTDWG----------------EIPKIERAALDGSDRVVLVNTSLGWPNG 483 (619)
T ss_dssp CSCEEEEC----TTCCSEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEE
T ss_pred CeEEEEEE----CCCCCeeeEEEEcCCCcEEEecCC----------------CCCEEEEEccCCCccEEEEeCCCCCCee
Confidence 445432 23568999999985 999999965 1357999988743334443 46889999
Q ss_pred EEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 212 VALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 212 ia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
++++++++.|||+++..++|.+++++|... +.+.......|.+|+++.+ +||++.+.
T Consensus 484 lalD~~~~~LY~aD~~~~~I~~~~~dG~~~---~~~~~~~l~~P~glav~~~-~ly~tD~~ 540 (619)
T 3s94_A 484 LALDYDEGKIYWGDAKTDKIEVMNTDGTGR---RVLVEDKIPHIFGFTLLGD-YVYWTDWQ 540 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEESSSCCC---EEEEECCCCSSCCEEEETT-EEEEECTT
T ss_pred eEEcccCCEEEEEECCCCEEEEEecCCCce---EEEeccCCCCcEEEEEECC-EEEEeecC
Confidence 999998888999999999999999987432 2222223347999999865 89999876
No 48
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.56 E-value=3.8e-12 Score=117.14 Aligned_cols=224 Identities=13% Similarity=0.119 Sum_probs=149.3
Q ss_pred CCcceEEEcCCC-CEEEEec-------CCeEEEEE--CCeeeE-EE----------ecC-CeEEEEeCC-CcEEEEc-CC
Q 018144 79 NHPEDASMDKNG-VIYTATR-------DGWIKRLQ--DGTWVN-WK----------FID-SHLIICDNA-NGLHKVS-ED 134 (360)
Q Consensus 79 ~~Pe~i~~d~~G-~l~v~~~-------~G~I~~~~--~g~~~~-~~----------~~~-g~L~v~~~~-~gl~~~~-~~ 134 (360)
.+|.+++++++| .+|+++. ++.|+.++ +++... +. ..+ +.+|+++.. +.+..++ .+
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 120 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT 120 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCC
Confidence 578899999976 6888873 45799998 554321 11 123 459998875 4677788 66
Q ss_pred C-e-EEEeeccCC----ccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC-CC
Q 018144 135 G-V-ENFLSYVNG----SKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-GF 206 (360)
Q Consensus 135 g-~-~~l~~~~~~----~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~-~l 206 (360)
+ . ..+...... ..-..+.+++++++|+ +|+++.. ..+.|+.+|..+++...... ..
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------------~~~~i~~~d~~~~~~~~~~~~~~ 184 (353)
T 3vgz_A 121 GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG----------------KESVIWVVDGGNIKLKTAIQNTG 184 (353)
T ss_dssp CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES----------------SSCEEEEEETTTTEEEEEECCCC
T ss_pred CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC----------------CCceEEEEcCCCCceEEEecCCC
Confidence 6 3 333221100 0011367899999985 8887522 24679999999888766555 44
Q ss_pred cCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccC-CCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcc
Q 018144 207 YFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSS 284 (360)
Q Consensus 207 ~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~-~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~ 284 (360)
..|+++++++||+.+|+++. .+.|..++....+.......... ....+.+++++++|+ +|++...
T Consensus 185 ~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------ 251 (353)
T 3vgz_A 185 KMSTGLALDSEGKRLYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK------------ 251 (353)
T ss_dssp TTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS------------
T ss_pred CccceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC------------
Confidence 56999999999999999886 57899999764322111111111 223567799999997 8887754
Q ss_pred hhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEE--CCEEEEEeCCCCeEEEEeC
Q 018144 285 KLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 285 ~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~--~g~Lylgs~~~~~i~~~~l 359 (360)
.+.|..+|. +++.+..+..+.+ ..+... +++||+++..++.|.++++
T Consensus 252 ----------------------~~~v~~~d~~~~~~~~~~~~~~~------~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 252 ----------------------AAEVLVVDTRNGNILAKVAAPES------LAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp ----------------------SSEEEEEETTTCCEEEEEECSSC------CCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ----------------------CCEEEEEECCCCcEEEEEEcCCC------ceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 357888986 5777777765332 234443 4679999988999998875
No 49
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.55 E-value=6.6e-13 Score=136.24 Aligned_cols=209 Identities=13% Similarity=0.135 Sum_probs=139.0
Q ss_pred cceEEEcCCCCEEEEecCCeEEEEE--CCee-----------eEEEecCCeEEEEeCCCcEEEEc-CCC-eEEEeeccCC
Q 018144 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGTW-----------VNWKFIDSHLIICDNANGLHKVS-EDG-VENFLSYVNG 145 (360)
Q Consensus 81 Pe~i~~d~~G~l~v~~~~G~I~~~~--~g~~-----------~~~~~~~g~L~v~~~~~gl~~~~-~~g-~~~l~~~~~~ 145 (360)
-.+|+.|++|.||+|+.+ ++++++ ++++ ..+...+|.|||++.. |+++++ .++ ++.+.....+
T Consensus 65 i~~i~~d~~g~lWigT~~-Gl~~yd~~~~~f~~~~~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~ 142 (758)
T 3ott_A 65 IYCGVIIDNTYLYMGTDN-GILVYNYRADRYEQPETDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNG 142 (758)
T ss_dssp EEEEEEETTTEEEEEETT-EEEEEETTTTEECCCSCCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEEEECHHHHC
T ss_pred EEEEEEcCCCcEEEEeCC-CeEEEeCCCCEEECcccCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEEEeccCCCC
Confidence 356788999999999965 599998 4432 2233457899999865 999999 556 6655221122
Q ss_pred ccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCC------cCcceEEEecCCC
Q 018144 146 SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF------YFANGVALSRDED 219 (360)
Q Consensus 146 ~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l------~~pngia~~~dg~ 219 (360)
.+...+..+..|.+|+||++. .++|++||+.+++++.+.... ...+.+..+++++
T Consensus 143 l~~~~i~~i~~d~~g~lWigt-------------------~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~ 203 (758)
T 3ott_A 143 LPNNTIYSIIRTKDNQIYVGT-------------------YNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQ 203 (758)
T ss_dssp CSCSCEEEEEECTTCCEEEEE-------------------TTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTT
T ss_pred cCCCeEEEEEEcCCCCEEEEe-------------------CCCHhhCccCCCceEEecCCCccccccceeEEEEEECCCC
Confidence 223456788899999999952 247999999888776543211 1234677777777
Q ss_pred EEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCcccc
Q 018144 220 YVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFS 299 (360)
Q Consensus 220 ~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 299 (360)
.||++.. ++|++|+.+..+......+.. .....|+.|.+|+|||++..
T Consensus 204 ~lWigt~--~Gl~~~~~~~~~~~~~~~l~~---~~i~~i~~d~~g~lWigT~~--------------------------- 251 (758)
T 3ott_A 204 CVWIGTE--GYLFQYFPSTGQIKQTEAFHN---NSIKSLALDGNGDLLAGTDN--------------------------- 251 (758)
T ss_dssp EEEEEEE--EEEEEEETTTTEEEEEEEEEE---EEEEEEEECTTCCEEEEETT---------------------------
T ss_pred EEEEEEC--CCCeEEcCCCCeEEeccCCCC---CeEEEEEEcCCCCEEEEeCC---------------------------
Confidence 6787763 479999975432222211110 12345778999999999854
Q ss_pred ccccCCCceEEEEECCCCcEEEEEeC----CCCCcccceeeEEEEC-CEEEEEeCCC
Q 018144 300 QFITLGGGAHLIHVAEDGTIIRNLVD----PTGQLMSFVTSGLQVD-NHLYVISLTS 351 (360)
Q Consensus 300 ~~~~~~~~~~v~~~~~~g~~~~~~~~----~~g~~~~~~t~~~~~~-g~Lylgs~~~ 351 (360)
++.+++++...+..+.. +.+...+.+.++.++. |.||+|+..+
T Consensus 252 ---------Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~G 299 (758)
T 3ott_A 252 ---------GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDYG 299 (758)
T ss_dssp ---------EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEESSS
T ss_pred ---------ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCCc
Confidence 78999987655555532 2234445677887774 9999999754
No 50
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.55 E-value=3.2e-13 Score=135.17 Aligned_cols=173 Identities=16% Similarity=0.215 Sum_probs=123.0
Q ss_pred CCCCCcceEEEcC-CCCEEEEe-cCCeEEEEE-CCe--eeE-----------EEe--cCCeEEEEeCCCc-EEEEcCCC-
Q 018144 76 GSVNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DGT--WVN-----------WKF--IDSHLIICDNANG-LHKVSEDG- 135 (360)
Q Consensus 76 ~~~~~Pe~i~~d~-~G~l~v~~-~~G~I~~~~-~g~--~~~-----------~~~--~~g~L~v~~~~~g-l~~~~~~g- 135 (360)
..+..|.+|++|. ++.||+++ .+++|+|++ +|. .+. ++. .+++||+++...+ |.+++.+|
T Consensus 37 ~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 37 GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp BCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 4478999999996 78999999 688999998 653 121 122 2678999998754 55666666
Q ss_pred -eEEEeeccCCccccccccEEEcCC-CcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe-CCCcCcceE
Q 018144 136 -VENFLSYVNGSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGV 212 (360)
Q Consensus 136 -~~~l~~~~~~~~~~~~n~l~~d~d-G~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~-~~l~~pngi 212 (360)
.+.+.. ..+..|++|++|+. |.||+||.+ ..++|.+.+++....+.+. ..+..||||
T Consensus 117 ~~~~l~~----~~l~~P~~Iavdp~~g~ly~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~~~~P~Gl 176 (619)
T 3s94_A 117 LRKVLFW----QELDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAGMDGSSRFIIINSEIYWPNGL 176 (619)
T ss_dssp SCEEEEC----SSCSCCCCEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred CEEEEEe----CCCCCCceEEEecCCCeEEEeccC----------------CCCEEEEEECCCCceEEEEeCCCCCCcEE
Confidence 445532 23467999999985 799999854 1358999998744444443 568899999
Q ss_pred EEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 213 ALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 213 a~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
+++++++.|||+++..++|.+++++|.. .+.+.......|.+|+++++ ++|++.+.
T Consensus 177 ald~~~~~LY~aD~~~~~I~~~~~dG~~---~~~~~~~~~~~P~gi~~~~~-~ly~td~~ 232 (619)
T 3s94_A 177 TLDYEEQKLYWADAKLNFIHKSNLDGTN---RQAVVKGSLPHPFALTLFED-ILYWTDWS 232 (619)
T ss_dssp EEETTTTEEEEEETTTCCEEEESSSCCE---EC---------CCCEEESSS-EEEEECTT
T ss_pred EEEccCCEEEEEeCCCCeEEEecCCCCc---cEEEEeCCCCCceEEEEeCC-EEEEecCC
Confidence 9999888999999999999999998742 22222222346999999977 89998875
No 51
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.54 E-value=1.6e-12 Score=118.89 Aligned_cols=194 Identities=18% Similarity=0.247 Sum_probs=132.7
Q ss_pred CCCEEEEecCCeEEEEE-CCeeeE------------EEecCCeEEEEeCCCcEEEEcCCC-eEEEeeccCCccccccccE
Q 018144 89 NGVIYTATRDGWIKRLQ-DGTWVN------------WKFIDSHLIICDNANGLHKVSEDG-VENFLSYVNGSKLRFANDV 154 (360)
Q Consensus 89 ~G~l~v~~~~G~I~~~~-~g~~~~------------~~~~~g~L~v~~~~~gl~~~~~~g-~~~l~~~~~~~~~~~~n~l 154 (360)
+|.||+++.+|+|++++ +|+... ....+|+||+++...+++.++.+| ...... ... .....+
T Consensus 107 ~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~-~~~---~~~~~~ 182 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFK-TND---AITSAA 182 (330)
T ss_dssp TTEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTTSCEEEEEE-CSS---CCCSCC
T ss_pred CCEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEe-cCC---Cceeee
Confidence 88999999888999998 653221 112367899988778999999447 332212 111 245677
Q ss_pred EEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE-EeCCCcCcceEEEecCCCEEEEEeCCCCEEEE
Q 018144 155 VEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGFYFANGVALSRDEDYVVVCESWKFRCRK 233 (360)
Q Consensus 155 ~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~-~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~ 233 (360)
.+|++|+||++ + ++|+++|+ +++... ..........++++++|. +|++.. .+.|++
T Consensus 183 ~~d~~g~l~v~------------------t--~~l~~~d~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~-~~gl~~ 239 (330)
T 3hxj_A 183 SIGKDGTIYFG------------------S--DKVYAINP-DGTEKWNFYAGYWTVTRPAISEDGT-IYVTSL-DGHLYA 239 (330)
T ss_dssp EECTTCCEEEE------------------S--SSEEEECT-TSCEEEEECCSSCCCSCCEECTTSC-EEEEET-TTEEEE
T ss_pred EEcCCCEEEEE------------------e--CEEEEECC-CCcEEEEEccCCcceeceEECCCCe-EEEEcC-CCeEEE
Confidence 88899999995 2 57999995 454432 333334567888998886 877765 468999
Q ss_pred EEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEE
Q 018144 234 YWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHV 313 (360)
Q Consensus 234 ~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~ 313 (360)
++.++... ..+. .....+..+.+|.+|+||+++.. ++|+++
T Consensus 240 ~~~~g~~~---~~~~-~~~~~~~~~~~~~~g~l~v~t~~-----------------------------------ggl~~~ 280 (330)
T 3hxj_A 240 INPDGTEK---WRFK-TGKRIESSPVIGNTDTIYFGSYD-----------------------------------GHLYAI 280 (330)
T ss_dssp ECTTSCEE---EEEE-CSSCCCSCCEECTTSCEEEECTT-----------------------------------CEEEEE
T ss_pred ECCCCCEe---EEee-CCCCccccceEcCCCeEEEecCC-----------------------------------CCEEEE
Confidence 97655322 1221 12234567888999999999875 689999
Q ss_pred CCCCcEEEEEeCCCCCcccceeeEEE-ECCEEEEEeCCCC
Q 018144 314 AEDGTIIRNLVDPTGQLMSFVTSGLQ-VDNHLYVISLTSN 352 (360)
Q Consensus 314 ~~~g~~~~~~~~~~g~~~~~~t~~~~-~~g~Lylgs~~~~ 352 (360)
|++|+.+..+..+.. .+.++.. .+|+||+++..+-
T Consensus 281 d~~g~~~~~~~~~~~----~~~~~~~d~~g~l~~gt~~G~ 316 (330)
T 3hxj_A 281 NPDGTEKWNFETGSW----IIATPVIDENGTIYFGTRNGK 316 (330)
T ss_dssp CTTSCEEEEEECSSC----CCSCCEECTTCCEEEECTTSC
T ss_pred CCCCcEEEEEEcCCc----cccceEEcCCCEEEEEcCCCe
Confidence 999998887775432 3455566 5699999987653
No 52
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.54 E-value=1.7e-12 Score=119.74 Aligned_cols=221 Identities=8% Similarity=0.003 Sum_probs=148.8
Q ss_pred CCcceEEEcCCCCEEEEe-cCCeEEEEE--CCeee----------EEEe-cCCeEEEEe-CCCcEEEEc-CCC-eE-EEe
Q 018144 79 NHPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWV----------NWKF-IDSHLIICD-NANGLHKVS-EDG-VE-NFL 140 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v~~-~~G~I~~~~--~g~~~----------~~~~-~~g~L~v~~-~~~gl~~~~-~~g-~~-~l~ 140 (360)
..|++++++ ++.+|+++ .++.|..+| +++.. .+.. .+|+|||++ ..+.+.++| .++ +. .+.
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~ 122 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE 122 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE
Confidence 468999987 67899998 578899999 56432 1223 578999999 567899999 666 43 332
Q ss_pred eccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCE
Q 018144 141 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDY 220 (360)
Q Consensus 141 ~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~ 220 (360)
..........|.+|++ .++++|+++.+ ..+.|.++|++++++.........|+++++++||+
T Consensus 123 ~g~~~~~~~~p~~i~~-~~~~lyv~~~~----------------~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~- 184 (328)
T 3dsm_A 123 CPDMDMESGSTEQMVQ-YGKYVYVNCWS----------------YQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNK- 184 (328)
T ss_dssp CTTCCTTTCBCCCEEE-ETTEEEEEECT----------------TCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSE-
T ss_pred cCCccccCCCcceEEE-ECCEEEEEcCC----------------CCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCC-
Confidence 2211112346889999 57899998642 14689999999888765544456799999999997
Q ss_pred EEEEeCCC----------CEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCC-CEEEEEecCchhHHHHhhcchhHHH
Q 018144 221 VVVCESWK----------FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDG-TFWIAIIKLDARRMKILNSSKLIKH 289 (360)
Q Consensus 221 l~v~~t~~----------~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G-~lwva~~~~~~~~~~~~~~~~~~r~ 289 (360)
+|++.... +.|+++|.+..+.. ..+.......|.+++++++| .+|++..
T Consensus 185 l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~--~~~~~~~g~~p~~la~~~d~~~lyv~~~------------------ 244 (328)
T 3dsm_A 185 MWTITDGGYEGSPYGYEAPSLYRIDAETFTVE--KQFKFKLGDWPSEVQLNGTRDTLYWINN------------------ 244 (328)
T ss_dssp EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE--EEEECCTTCCCEEEEECTTSCEEEEESS------------------
T ss_pred EEEEECCCccCCccccCCceEEEEECCCCeEE--EEEecCCCCCceeEEEecCCCEEEEEcc------------------
Confidence 88887764 78999997643221 12211111269999999876 5888643
Q ss_pred HHHhCCccccccccCCCceEEEEECCC-CcEEEEEeCCCCCcccceeeEEEE--CCEEEEEe----CCCCeEEEEeC
Q 018144 290 VLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVIS----LTSNFIGKVQL 359 (360)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~g~~~~~~t~~~~~--~g~Lylgs----~~~~~i~~~~l 359 (360)
.|+++|.+ +++...-..+.+ ...+.++..+ +++||+++ ..++.|.+++.
T Consensus 245 -------------------~v~~~d~~t~~~~~~~~~~~~--~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 245 -------------------DIWRMPVEADRVPVRPFLEFR--DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp -------------------SEEEEETTCSSCCSSCSBCCC--SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred -------------------EEEEEECCCCceeeeeeecCC--CCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 36788864 443210001111 2356677775 58999999 77888988875
No 53
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.53 E-value=1.4e-12 Score=130.58 Aligned_cols=176 Identities=16% Similarity=0.118 Sum_probs=128.2
Q ss_pred cCCCCCCcceEEEcC-CCCEEEEe-cCCeEEEEE-CCee--eEE----------------Ee--cCCeEEEEeCCCcEEE
Q 018144 74 GEGSVNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DGTW--VNW----------------KF--IDSHLIICDNANGLHK 130 (360)
Q Consensus 74 ~~~~~~~Pe~i~~d~-~G~l~v~~-~~G~I~~~~-~g~~--~~~----------------~~--~~g~L~v~~~~~gl~~ 130 (360)
+...+..+.+|++|. ++.||+++ ..++|+|++ +|.. +.+ +. .+++||+++...+.+.
T Consensus 335 ~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~ 414 (628)
T 4a0p_A 335 PIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVIN 414 (628)
T ss_dssp CCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEE
Confidence 333467788899996 78999999 688999998 6531 111 11 2477999998765544
Q ss_pred E-cCCC--eEEEeeccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe-CC
Q 018144 131 V-SEDG--VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DG 205 (360)
Q Consensus 131 ~-~~~g--~~~l~~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~-~~ 205 (360)
+ +.+| .+.+... .+..|++|++|+ +|.||+||.+. ..++|.+.+++....+.+. ..
T Consensus 415 v~~~~G~~~~~l~~~----~l~~Pr~iavdp~~g~ly~tD~g~---------------~~~~I~r~~~dG~~~~~l~~~~ 475 (628)
T 4a0p_A 415 VTRLDGRSVGVVLKG----EQDRPRAVVVNPEKGYMYFTNLQE---------------RSPKIERAALDGTEREVLFFSG 475 (628)
T ss_dssp EEETTSCEEEEEEEC----TTCCEEEEEEETTTTEEEEEEEET---------------TEEEEEEEETTSCSCEEEECSS
T ss_pred EEECCCCeEEEEEeC----CCCceeeEEEecCCCeEEEeecCC---------------CCCeEEEEeCCCCCcEEEEecc
Confidence 4 4667 3344322 235799999998 89999998641 1137999998744444444 46
Q ss_pred CcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 206 FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 206 l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
+..|||++++++++.|||+++..++|.+++++|.. .+++.......|.+|+++. |+||++.+.
T Consensus 476 l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~---r~~~~~~~~~~P~glav~~-~~ly~tD~~ 538 (628)
T 4a0p_A 476 LSKPIALALDSRLGKLFWADSDLRRIESSDLSGAN---RIVLEDSNILQPVGLTVFE-NWLYWIDKQ 538 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSSCSCEEEEEEET-TEEEEEETT
T ss_pred CCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCc---eEEEEcCCCCCcEEEEEEC-CEEEEEECC
Confidence 88999999999988899999999999999998843 3344433334799999987 799999876
No 54
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.53 E-value=2e-12 Score=132.32 Aligned_cols=171 Identities=13% Similarity=0.122 Sum_probs=122.6
Q ss_pred CCCcceEEEcC-CCCEEEEe-cCCeEEEEE-CCe-----eeE-----------EEe--cCCeEEEEeCCC-cEEEEcCCC
Q 018144 78 VNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DGT-----WVN-----------WKF--IDSHLIICDNAN-GLHKVSEDG 135 (360)
Q Consensus 78 ~~~Pe~i~~d~-~G~l~v~~-~~G~I~~~~-~g~-----~~~-----------~~~--~~g~L~v~~~~~-gl~~~~~~g 135 (360)
+..|.+|++|. ++.||+++ .+++|++++ +|. .+. ++. .+++||+++... .|.+++.+|
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 68899999996 78999999 678999998 542 121 121 256899999874 566677666
Q ss_pred --eEEEeeccCCccccccccEEEcCC-CcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe-CCCcCcce
Q 018144 136 --VENFLSYVNGSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANG 211 (360)
Q Consensus 136 --~~~l~~~~~~~~~~~~n~l~~d~d-G~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~-~~l~~png 211 (360)
.+++... .+..|++|++|+. |.||+||.+ ..++|.+++.+....+.+. .++..|+|
T Consensus 503 ~~~~~l~~~----~l~~P~gIaVDp~~g~LYwtD~g----------------~~~~I~~~~~dG~~~~~lv~~~l~~P~G 562 (791)
T 3m0c_C 503 VKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPNG 562 (791)
T ss_dssp SSEEEEEEC----TTCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCCEEEEECSSCSCEEE
T ss_pred CeEEEEEeC----CCCCcceEEEecCCCCEEEecCC----------------CCCeEEEEecCCCceEEEEeCCCCCceE
Confidence 4444331 2356999999985 799999865 1257999998754444443 46889999
Q ss_pred EEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccC--CCCCCceeEEcCCCCEEEEEec
Q 018144 212 VALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN--LPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 212 ia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~--~~g~pd~i~~d~~G~lwva~~~ 272 (360)
|+++++++.|||++...++|.+++++|... ..+... .-..|.+|+++. ++||++.+.
T Consensus 563 LavD~~~~~LYwaD~~~~~I~~~d~dG~~~---~~v~~~~~~l~~P~glav~~-~~lYwtD~~ 621 (791)
T 3m0c_C 563 ITLDLLSGRLYWVDSKLHSISSIDVNGGNR---KTILEDEKRLAHPFSLAVFE-DKVFWTDII 621 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEEECTTTTSSEEEEEEET-TEEEEEETT
T ss_pred EEEecCCCeEEEEeCCCCcEEEEecCCCce---EEEecCCCccCCCCEEEEeC-CEEEEEECC
Confidence 999988888999999999999999987532 222221 122577788865 489999876
No 55
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.52 E-value=1.9e-12 Score=123.42 Aligned_cols=172 Identities=16% Similarity=0.203 Sum_probs=117.6
Q ss_pred CCCcceEEEcCCCC-EEEEecCC--eEEEEE-C-Ce-eeEE--------------E-ec-CCeEEEEeCCCcEEEEc-CC
Q 018144 78 VNHPEDASMDKNGV-IYTATRDG--WIKRLQ-D-GT-WVNW--------------K-FI-DSHLIICDNANGLHKVS-ED 134 (360)
Q Consensus 78 ~~~Pe~i~~d~~G~-l~v~~~~G--~I~~~~-~-g~-~~~~--------------~-~~-~g~L~v~~~~~gl~~~~-~~ 134 (360)
...|. ++++++|. ||+++.++ .|++++ . +. ...+ . .+ +|+||+++..+.+++++ .+
T Consensus 171 ~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~ 249 (409)
T 3hrp_A 171 FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKT 249 (409)
T ss_dssp CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTT
T ss_pred CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCC
Confidence 45677 99998775 78888544 899998 3 22 1122 1 12 68899988766699999 45
Q ss_pred C-eEEEee-ccCCccccccc-cEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC-C----
Q 018144 135 G-VENFLS-YVNGSKLRFAN-DVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-G---- 205 (360)
Q Consensus 135 g-~~~l~~-~~~~~~~~~~n-~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~-~---- 205 (360)
+ .+.+.. ...+.....|. +|++++ +|+||++|.. .++|++++++ ++...+.. .
T Consensus 250 ~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~-----------------~~~I~~~~~~-g~~~~~~g~~~~~g 311 (409)
T 3hrp_A 250 QEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN-----------------LSSVYKITPD-GECEWFCGSATQKT 311 (409)
T ss_dssp CCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT-----------------TTEEEEECTT-CCEEEEEECTTCCS
T ss_pred CCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC-----------------CCEEEEEecC-CCEEEEEeCCCCCC
Confidence 5 544421 11111112244 999999 6899999864 4689999987 44444322 1
Q ss_pred ----------CcCcceEEEecCCCEEEEEeC-CCCEEEEEEecCCcCcceeeeccC--------------CCCCCceeEE
Q 018144 206 ----------FYFANGVALSRDEDYVVVCES-WKFRCRKYWLKGERKGKLETFAEN--------------LPGAPDNINL 260 (360)
Q Consensus 206 ----------l~~pngia~~~dg~~l~v~~t-~~~~i~~~~~~g~~~~~~~~~~~~--------------~~g~pd~i~~ 260 (360)
+..|+|++++++|+ +|++++ .+++|.++++.... ...+... .-..|.++++
T Consensus 312 ~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~G~---v~~~~g~~~~~g~~~g~~~~~~~~~P~giav 387 (409)
T 3hrp_A 312 VQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILDGY---VSTVAGQVDVASQIDGTPLEATFNYPYDICY 387 (409)
T ss_dssp CBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTTTE---EEEEEECTTCBSCCCBSTTTCCBSSEEEEEE
T ss_pred cCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCCCE---EEEEeCCCCCCCcCCCChhceEeCCceEEEE
Confidence 56799999999998 999999 99999999943222 2222111 0125999999
Q ss_pred cCCCCEEEEEec
Q 018144 261 APDGTFWIAIIK 272 (360)
Q Consensus 261 d~~G~lwva~~~ 272 (360)
|++|+|||+...
T Consensus 388 d~~g~lyVad~~ 399 (409)
T 3hrp_A 388 DGEGGYWIAEAW 399 (409)
T ss_dssp CSSSEEEEEEST
T ss_pred cCCCCEEEEECC
Confidence 999999999987
No 56
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.51 E-value=7e-12 Score=116.01 Aligned_cols=247 Identities=15% Similarity=0.215 Sum_probs=154.1
Q ss_pred ccceEecCCCCCCcceEEEcCCCCEEEEec-CCeEEEEE--CCeeeEE-----------------Ee-----cCCeEEEE
Q 018144 68 QDFIKVGEGSVNHPEDASMDKNGVIYTATR-DGWIKRLQ--DGTWVNW-----------------KF-----IDSHLIIC 122 (360)
Q Consensus 68 ~~~~~~~~~~~~~Pe~i~~d~~G~l~v~~~-~G~I~~~~--~g~~~~~-----------------~~-----~~g~L~v~ 122 (360)
...+.+.++ +..|++|+++++|.||++.. .|+|++++ +|+.+.+ +. .++.||++
T Consensus 22 ~~~~~va~g-L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 22 KVLRTVATG-LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp EEEEEEECC-CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred ceeEEeecC-CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEE
Confidence 355667666 89999999999999999996 89999998 4543322 11 14679986
Q ss_pred eC---CCcEEEEc-CC-----C----eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEE
Q 018144 123 DN---ANGLHKVS-ED-----G----VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQL 189 (360)
Q Consensus 123 ~~---~~gl~~~~-~~-----g----~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l 189 (360)
.. .+.|.++. .. . .+.+....+....+....|++++||.|||+.......... .+ .....|.|
T Consensus 101 yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~--qd--~~~~~G~I 176 (347)
T 3das_A 101 FTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLS--QD--RKSLGGKI 176 (347)
T ss_dssp EECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGT--TC--TTCSTTCE
T ss_pred EecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccc--cC--CCCCCCEE
Confidence 42 35788886 32 1 3344333333334567889999999999996432110000 00 01235889
Q ss_pred EEEcCCCC--------eEEEEeCCCcCcceEEEecCCCEEEEEeCCCC---EEEEEEecCCcCcceee--------e---
Q 018144 190 LKYDPSSN--------ITTLVADGFYFANGVALSRDEDYVVVCESWKF---RCRKYWLKGERKGKLET--------F--- 247 (360)
Q Consensus 190 ~~~d~~tg--------~~~~~~~~l~~pngia~~~dg~~l~v~~t~~~---~i~~~~~~g~~~~~~~~--------~--- 247 (360)
+|++++.. ..+.+..++..|+|++++++|+ ||+++.+.. +|.++. .|...+.... +
T Consensus 177 lRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~~~~deln~i~-~G~nyGwP~~~g~~~~~~~~~P 254 (347)
T 3das_A 177 LRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFGQDTWDELNAIK-PGDNYGWPEAEGKGGGSGFHDP 254 (347)
T ss_dssp EEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCC-EEEEECCSSSCEEEEEEC-TTCBCCTTTCCSSCCCTTCCCC
T ss_pred EEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCC-EEEEecCCCCCceeeEEc-CCCEecCCcccCCCCCccccCC
Confidence 99999743 2356777899999999999886 999998653 566553 2222111000 0
Q ss_pred -ccCCC--CCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEEC--CCC---cE
Q 018144 248 -AENLP--GAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA--EDG---TI 319 (360)
Q Consensus 248 -~~~~~--g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~--~~g---~~ 319 (360)
..-.+ ..|.|+++. +|.+|++.... ..|.++. .++ +.
T Consensus 255 ~~~~~~~~~ap~G~~~~-~g~~~~~~l~~----------------------------------~~l~~v~~~~~~~~~~~ 299 (347)
T 3das_A 255 VAQWSTDEASPSGIAYA-EGSVWMAGLRG----------------------------------ERLWRIPLKGTAAAADP 299 (347)
T ss_dssp SEEECTTTCCEEEEEEE-TTEEEEEESTT----------------------------------CSEEEEEEETTEESSCC
T ss_pred cEecCCCCCCCcceEEE-cCceeeccccC----------------------------------CEEEEEEecCCceecce
Confidence 00011 247788887 47899987652 3455554 332 11
Q ss_pred EEEEeCCCCCcccceeeEEEE-CCEEEEEeCCC----------CeEEEEeCC
Q 018144 320 IRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTS----------NFIGKVQLS 360 (360)
Q Consensus 320 ~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~----------~~i~~~~l~ 360 (360)
...+.+. ...+..+... +|.||+++.+. ++|.|+.++
T Consensus 300 e~~l~~~----~gR~~dv~~~pDG~lyv~td~~~g~g~p~~~ddri~r~~~~ 347 (347)
T 3das_A 300 QAFLEGE----YGRLRTVAPAGGDKLWLVTSNTDGRGDAKGGDDRILELEVE 347 (347)
T ss_dssp EEESTTT----SSCEEEEEEEETTEEEEEECTTSSSSCCCTTCSCEEEEEEC
T ss_pred EEeecCC----CCCccEEEECCCCcEEEEEcCCCCCCCCCCCCCEEEEEeCC
Confidence 2222222 2347777766 79999997744 489888764
No 57
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.51 E-value=3e-12 Score=115.83 Aligned_cols=165 Identities=14% Similarity=0.198 Sum_probs=117.0
Q ss_pred CCCcceEEEcCCCCEEEEec-CCeEEEEE--CCeeeEE----------------EecCCeEEEEeC--------------
Q 018144 78 VNHPEDASMDKNGVIYTATR-DGWIKRLQ--DGTWVNW----------------KFIDSHLIICDN-------------- 124 (360)
Q Consensus 78 ~~~Pe~i~~d~~G~l~v~~~-~G~I~~~~--~g~~~~~----------------~~~~g~L~v~~~-------------- 124 (360)
...|.++++|++|.||+++. +++|++++ +|+.+.+ ...+|+||+++.
T Consensus 68 ~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~ 147 (296)
T 3e5z_A 68 SHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGE 147 (296)
T ss_dssp CSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCC
T ss_pred CCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccccccc
Confidence 35799999999999999984 58899998 6654432 124688999753
Q ss_pred ----CCcEEEEcCCC-eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCC-CCe
Q 018144 125 ----ANGLHKVSEDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SNI 198 (360)
Q Consensus 125 ----~~gl~~~~~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-tg~ 198 (360)
..++++++.++ ++.+... +..|++++++++|++++++.. .++|++|+.+ +|+
T Consensus 148 ~~~~~~~l~~~~~~g~~~~~~~~-----~~~~~gi~~s~dg~~lv~~~~-----------------~~~i~~~~~~~~g~ 205 (296)
T 3e5z_A 148 MELPGRWVFRLAPDGTLSAPIRD-----RVKPNGLAFLPSGNLLVSDTG-----------------DNATHRYCLNARGE 205 (296)
T ss_dssp CCSSSCEEEEECTTSCEEEEECC-----CSSEEEEEECTTSCEEEEETT-----------------TTEEEEEEECSSSC
T ss_pred ccCCCcEEEEECCCCCEEEeecC-----CCCCccEEECCCCCEEEEeCC-----------------CCeEEEEEECCCCc
Confidence 24788998557 6554322 346899999999987787654 4678888864 455
Q ss_pred E---E-EEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEc-CCC-CEEEEEec
Q 018144 199 T---T-LVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLA-PDG-TFWIAIIK 272 (360)
Q Consensus 199 ~---~-~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d-~~G-~lwva~~~ 272 (360)
+ . .+......|.+++++++|+ +|++. .++|.+|++++.. ...+. ...+ |.+++++ ++| .||+++..
T Consensus 206 ~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~g~~---~~~~~-~~~~-~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 206 TEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPDGDE---LGRVL-TPQT-TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp EEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTTSCE---EEEEE-CSSC-CCEEEEESTTSCEEEEEETT
T ss_pred CcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCCCCE---EEEEE-CCCC-ceeEEEECCCCCEEEEEcCC
Confidence 5 2 2212345789999999997 88888 5789999987542 22232 1223 8899984 666 59999865
No 58
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.51 E-value=7e-12 Score=115.20 Aligned_cols=180 Identities=14% Similarity=0.150 Sum_probs=129.0
Q ss_pred EEEEeCCCcEEEEc-CCC-eEEEeeccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCC
Q 018144 119 LIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS 195 (360)
Q Consensus 119 L~v~~~~~gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 195 (360)
|+++. .+.|.+++ ..+ .+.+... +..|.++++|+ +++||++|.. .++|++++++
T Consensus 4 ll~~~-~~~I~~i~~~~~~~~~~~~~-----~~~p~g~~~d~~~~~ly~~D~~-----------------~~~I~~~~~~ 60 (316)
T 1ijq_A 4 LFFTN-RHEVRKMTLDRSEYTSLIPN-----LRNVVALDTEVASNRIYWSDLS-----------------QRMICSTQLD 60 (316)
T ss_dssp EEEEC-BSSEEEEETTSCCCEEEECS-----CSSEEEEEEETTTTEEEEEETT-----------------TTEEEEEEC-
T ss_pred EEEEC-CCeEEEEECCCcceEehhcC-----CCceEEEEEEeCCCEEEEEECC-----------------CCcEEEEECC
Confidence 45554 45688888 444 4444322 34688999996 5689999864 4689999987
Q ss_pred C----CeEEEE-eCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcC-CCCEEEE
Q 018144 196 S----NITTLV-ADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIA 269 (360)
Q Consensus 196 t----g~~~~~-~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~-~G~lwva 269 (360)
+ ...+.+ ..++..|.|+++++.++.|||++...++|.+++++|.. .+.+.......|.++++|+ +|++|++
T Consensus 61 g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~---~~~~~~~~~~~P~~iavdp~~g~ly~~ 137 (316)
T 1ijq_A 61 RAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK---RKTLFRENGSKPRAIVVDPVHGFMYWT 137 (316)
T ss_dssp -------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS---EEEEEECTTCCEEEEEEETTTTEEEEE
T ss_pred CCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc---eEEEEECCCCCcceEEeCCCCCEEEEE
Confidence 5 233333 34678899999998777799999999999999987642 2233322234699999996 6789998
Q ss_pred EecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEE--CCEEEEE
Q 018144 270 IIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVI 347 (360)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~--~g~Lylg 347 (360)
.... .+.|.+++.+|+....+.... +..+.++..+ +++||++
T Consensus 138 d~~~---------------------------------~~~I~~~~~dG~~~~~~~~~~---~~~P~gla~d~~~~~lY~~ 181 (316)
T 1ijq_A 138 DWGT---------------------------------PAKIKKGGLNGVDIYSLVTEN---IQWPNGITLDLLSGRLYWV 181 (316)
T ss_dssp ECSS---------------------------------SCEEEEEETTSCCEEEEECSS---CSCEEEEEEETTTTEEEEE
T ss_pred ccCC---------------------------------CCeEEEEcCCCCCeEEEEECC---CCCceEEEEeccCCEEEEE
Confidence 8651 258999999998776664322 4567788877 5899999
Q ss_pred eCCCCeEEEEeCC
Q 018144 348 SLTSNFIGKVQLS 360 (360)
Q Consensus 348 s~~~~~i~~~~l~ 360 (360)
....++|.+++++
T Consensus 182 D~~~~~I~~~d~d 194 (316)
T 1ijq_A 182 DSKLHSISSIDVN 194 (316)
T ss_dssp ETTTTEEEEEETT
T ss_pred ECCCCeEEEEecC
Confidence 9999999999874
No 59
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.50 E-value=3e-13 Score=137.35 Aligned_cols=156 Identities=10% Similarity=0.083 Sum_probs=116.1
Q ss_pred cccccEEEc-CCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe-CCCcCcceEEEecCCCEEEEEeC
Q 018144 149 RFANDVVEA-SDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCES 226 (360)
Q Consensus 149 ~~~n~l~~d-~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~-~~l~~pngia~~~dg~~l~v~~t 226 (360)
..|.+|++| ..|+||++|.. .++|.++++++...+.+. .++..|++|++++++..|||++.
T Consensus 453 ~~P~glavD~~~g~LY~tD~~-----------------~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~ 515 (699)
T 1n7d_A 453 QAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDW 515 (699)
T ss_dssp --CCCEECCCSSSBCEECCTT-----------------TSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCC
T ss_pred CCcceEEEEeeCCcEEEEecc-----------------CCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEccc
Confidence 468899999 56799998754 467999998865555554 45789999999998778999998
Q ss_pred CC-CEEEEEEecCCcCcceeeeccCCCCCCceeEEcCC-CCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccC
Q 018144 227 WK-FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPD-GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITL 304 (360)
Q Consensus 227 ~~-~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~-G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 304 (360)
+. ++|++++++|... +++.......|.+|++|++ ++||++...
T Consensus 516 ~~~~~I~~~~~dG~~~---~~l~~~~l~~PnGlavd~~~~~LY~aD~~-------------------------------- 560 (699)
T 1n7d_A 516 GTPAKIKKGGLNGVDI---YSLVTENIQWPNGITLDLLSGRLYWVDSK-------------------------------- 560 (699)
T ss_dssp SSSCCEEBCCSSSCCC---CEESCSSCSSCCCEEECTTTCCEEEEETT--------------------------------
T ss_pred CCCCeEEEEeCCCCCe---eEEEeCCCCCccEEEEeccCCEEEEEecC--------------------------------
Confidence 65 7899999887422 2232222346999999964 689999876
Q ss_pred CCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCCCCeEEEEeC
Q 018144 305 GGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 305 ~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~~~i~~~~l 359 (360)
...|.+++.+|...+.+....+. +..+.++..++++||+....+++|.+++.
T Consensus 561 --~~~I~~~d~dG~~~~~~~~~~~~-~~~P~glavd~~~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 561 --LHSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANR 612 (699)
T ss_dssp --TTEEEEECSSSSCCEEECCCSSS-CSSCCCCEEETTEEEEECSTTTCEEEEET
T ss_pred --CCeEEEEccCCCceEEEEecCCc-CCCceEeEEECCEEEEEeCCCCeEEEEEc
Confidence 35899999988655555432222 45567777788899999999999999863
No 60
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.49 E-value=2.7e-12 Score=114.63 Aligned_cols=157 Identities=13% Similarity=0.097 Sum_probs=118.0
Q ss_pred cccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe-CCCcCcceEEEecCCCEEEEEeC
Q 018144 149 RFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCES 226 (360)
Q Consensus 149 ~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~-~~l~~pngia~~~dg~~l~v~~t 226 (360)
..|.++++|+ +++||++|.. .++|++++++++..+.+. .++..|++++++++++.+||++.
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~ 98 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDIS-----------------EPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDS 98 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETT-----------------TTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEET
T ss_pred CcEEEEEEecCCCEEEEEECC-----------------CCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEEC
Confidence 4678999997 5689999854 468999999866555443 45679999999998778999999
Q ss_pred CCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcC-CCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCC
Q 018144 227 WKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLG 305 (360)
Q Consensus 227 ~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 305 (360)
..++|.++++++... +.+.......|.++++|+ +|++|++....
T Consensus 99 ~~~~I~~~~~~g~~~---~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~-------------------------------- 143 (267)
T 1npe_A 99 QLDRIEVAKMDGTQR---RVLFDTGLVNPRGIVTDPVRGNLYWTDWNR-------------------------------- 143 (267)
T ss_dssp TTTEEEEEETTSCSC---EEEECSSCSSEEEEEEETTTTEEEEEECCS--------------------------------
T ss_pred CCCEEEEEEcCCCCE---EEEEECCCCCccEEEEeeCCCEEEEEECCC--------------------------------
Confidence 999999999886432 222222224699999998 57899988641
Q ss_pred CceEEEEECCCCcEEEEEeCCCCCcccceeeEEEE--CCEEEEEeCCCCeEEEEeCC
Q 018144 306 GGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQLS 360 (360)
Q Consensus 306 ~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~--~g~Lylgs~~~~~i~~~~l~ 360 (360)
..+.|.+++.+|+....+.... +..+.++..+ +++||+++...+.|.+++++
T Consensus 144 ~~~~I~~~~~dg~~~~~~~~~~---~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 144 DNPKIETSHMDGTNRRILAQDN---LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPA 197 (267)
T ss_dssp SSCEEEEEETTSCCCEEEECTT---CSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCcEEEEEecCCCCcEEEEECC---CCCCcEEEEcCCCCEEEEEECCCCEEEEEecC
Confidence 1257889998887665554322 3457777776 47999999999999999864
No 61
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.49 E-value=2.4e-12 Score=116.85 Aligned_cols=167 Identities=16% Similarity=0.212 Sum_probs=119.1
Q ss_pred CCcceEEEcCC-CCEEEEecCCeEEEEE-CCeeeEE-----------------EecCCeEEEEeCC--------------
Q 018144 79 NHPEDASMDKN-GVIYTATRDGWIKRLQ-DGTWVNW-----------------KFIDSHLIICDNA-------------- 125 (360)
Q Consensus 79 ~~Pe~i~~d~~-G~l~v~~~~G~I~~~~-~g~~~~~-----------------~~~~g~L~v~~~~-------------- 125 (360)
..|.++++|++ |+||+++..++|++++ +|+...+ ...+|+||+++..
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~ 150 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQE 150 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSS
T ss_pred CCCceEEEecCCCcEEEEECCCCEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccC
Confidence 57999999999 9999999766899998 7654433 1236789999864
Q ss_pred --CcEEEEcCCC-eEEEeeccCCccccccccEEEc----CCC-cEEEEeCCCCCCCccceecccccCCccEEEEEcCC-C
Q 018144 126 --NGLHKVSEDG-VENFLSYVNGSKLRFANDVVEA----SDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-S 196 (360)
Q Consensus 126 --~gl~~~~~~g-~~~l~~~~~~~~~~~~n~l~~d----~dG-~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-t 196 (360)
.++++++.++ ++.+... ...+++++++ ++| .+|+++.. .++|++||.+ +
T Consensus 151 ~~~~l~~~~~~g~~~~~~~~-----~~~~~~i~~~~~~d~dg~~l~v~~~~-----------------~~~i~~~~~~~~ 208 (314)
T 1pjx_A 151 KFGSIYCFTTDGQMIQVDTA-----FQFPNGIAVRHMNDGRPYQLIVAETP-----------------TKKLWSYDIKGP 208 (314)
T ss_dssp SCEEEEEECTTSCEEEEEEE-----ESSEEEEEEEECTTSCEEEEEEEETT-----------------TTEEEEEEEEET
T ss_pred CCCeEEEECCCCCEEEeccC-----CCCcceEEEecccCCCCCEEEEEECC-----------------CCeEEEEECCCC
Confidence 3688888547 5554322 2357889999 999 69998753 4678888864 4
Q ss_pred CeEE---EEe--C-CC-cCcceEEEecCCCEEEEEeCCCCEEEEEEec-CCcCcceeeeccCCCCCCceeEEcCCCC-EE
Q 018144 197 NITT---LVA--D-GF-YFANGVALSRDEDYVVVCESWKFRCRKYWLK-GERKGKLETFAENLPGAPDNINLAPDGT-FW 267 (360)
Q Consensus 197 g~~~---~~~--~-~l-~~pngia~~~dg~~l~v~~t~~~~i~~~~~~-g~~~~~~~~~~~~~~g~pd~i~~d~~G~-lw 267 (360)
++.. .+. . .. ..|.+++++++|+ +|+++...++|.+|+++ +.... .+. .....|.+++++++|+ ||
T Consensus 209 g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~g~~~~---~~~-~~~~~~~~i~~~~dg~~l~ 283 (314)
T 1pjx_A 209 AKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGGQPKM---RIR-CPFEKPSNLHFKPQTKTIF 283 (314)
T ss_dssp TEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCBSCSE---EEE-CSSSCEEEEEECTTSSEEE
T ss_pred CccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCCCcEeE---EEe-CCCCCceeEEECCCCCEEE
Confidence 5432 111 1 12 5689999999996 88888777899999986 43222 221 1124688999999998 99
Q ss_pred EEEec
Q 018144 268 IAIIK 272 (360)
Q Consensus 268 va~~~ 272 (360)
++...
T Consensus 284 v~~~~ 288 (314)
T 1pjx_A 284 VTEHE 288 (314)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 99865
No 62
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.48 E-value=4.7e-12 Score=118.25 Aligned_cols=247 Identities=13% Similarity=0.133 Sum_probs=151.5
Q ss_pred eEecCCCCCCcceEEEcCCCC-EEEEecCCeEEEEE-CCeee------------------EEEec-----CCeEEEEeCC
Q 018144 71 IKVGEGSVNHPEDASMDKNGV-IYTATRDGWIKRLQ-DGTWV------------------NWKFI-----DSHLIICDNA 125 (360)
Q Consensus 71 ~~~~~~~~~~Pe~i~~d~~G~-l~v~~~~G~I~~~~-~g~~~------------------~~~~~-----~g~L~v~~~~ 125 (360)
+.+..+ +..|.+|+++++|. ||++...|+|++++ +|+.. .+... ++.|||+...
T Consensus 11 ~~va~~-l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~ 89 (353)
T 2g8s_A 11 EVLQDK-LDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSE 89 (353)
T ss_dssp EEEEEE-ESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred EEEECC-CCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeC
Confidence 444443 78999999999999 99999889999998 66421 12222 5789998643
Q ss_pred --------CcEEEEc-C-C-C-e---EEEeeccCC--ccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccE
Q 018144 126 --------NGLHKVS-E-D-G-V---ENFLSYVNG--SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQ 188 (360)
Q Consensus 126 --------~gl~~~~-~-~-g-~---~~l~~~~~~--~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~ 188 (360)
..|.+++ . + + + +.+...... .....+++|++++||.|||+....... ....+ .....|+
T Consensus 90 ~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~--~~~q~--~~~~~g~ 165 (353)
T 2g8s_A 90 VGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQR--PTAQD--LDKLQGK 165 (353)
T ss_dssp ECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCG--GGGGC--TTSCTTE
T ss_pred CCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCC--CccCC--CCCCCeE
Confidence 2577776 2 2 2 2 223333221 223568899999999999997542110 00000 1123578
Q ss_pred EEEEcCCCC-------------eEEEEeCCCcCcceEEEecCCCEEEEEeCCCC---EEEEEEecCCcCcc---------
Q 018144 189 LLKYDPSSN-------------ITTLVADGFYFANGVALSRDEDYVVVCESWKF---RCRKYWLKGERKGK--------- 243 (360)
Q Consensus 189 l~~~d~~tg-------------~~~~~~~~l~~pngia~~~dg~~l~v~~t~~~---~i~~~~~~g~~~~~--------- 243 (360)
|+|+|+++. ..+.+..++..|+|++++++...||+++.+.. +|.++.. |...+.
T Consensus 166 I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~-G~nyGwp~~~~~~~~ 244 (353)
T 2g8s_A 166 LVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQK-GKNYGWPLATWGINY 244 (353)
T ss_dssp EEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCT-TCBCCTTTBCSSBCT
T ss_pred EEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEecc-CCcCCCCCccCCCCC
Confidence 999999743 34556678889999999994446999998643 5655432 111110
Q ss_pred ------------eeeecc-----CCCCCCceeEEcC-------CCCEEEEEecCchhHHHHhhcchhHHHHHHhCCcccc
Q 018144 244 ------------LETFAE-----NLPGAPDNINLAP-------DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFS 299 (360)
Q Consensus 244 ------------~~~~~~-----~~~g~pd~i~~d~-------~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 299 (360)
...+.. .....|.++++.. +|++|++...
T Consensus 245 ~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~--------------------------- 297 (353)
T 2g8s_A 245 SGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALK--------------------------- 297 (353)
T ss_dssp TSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETT---------------------------
T ss_pred CCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEcc---------------------------
Confidence 000000 0012477888753 5889999876
Q ss_pred ccccCCCceEEEEECCC-CcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeC-CCCeEEEEe
Q 018144 300 QFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISL-TSNFIGKVQ 358 (360)
Q Consensus 300 ~~~~~~~~~~v~~~~~~-g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~-~~~~i~~~~ 358 (360)
.+.|.+++.+ ++......--.+ ....+..+... +|.||+.+. .+.+|.|+.
T Consensus 298 -------~~~v~~~~~~~~~~~~~~~~~~~-~~~rp~~v~~~pdG~lyv~td~~~g~I~ri~ 351 (353)
T 2g8s_A 298 -------DKDVIVMSVNGDKVTEDGRILTD-RGQRIRDVRTGPDGYLYVLTDESSGELLKVS 351 (353)
T ss_dssp -------TTEEEEEEEETTEEEEEEEESGG-GCCCEEEEEECTTSCEEEEECSTTEEEEEEE
T ss_pred -------CCEEEEEEeCCCeEeeeEEcccC-CCCceeEEEECCCCcEEEEEeCCCCEEEEEe
Confidence 3577777654 343322111011 12357778877 589999865 678888875
No 63
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.47 E-value=6.3e-12 Score=114.89 Aligned_cols=204 Identities=16% Similarity=0.224 Sum_probs=137.5
Q ss_pred ceEEEcCCCCEEEEecCCeEEEEE-CCeee-----------EEEecCCeEEEEeCCCcEEEEcCCC-eEEEeeccCCccc
Q 018144 82 EDASMDKNGVIYTATRDGWIKRLQ-DGTWV-----------NWKFIDSHLIICDNANGLHKVSEDG-VENFLSYVNGSKL 148 (360)
Q Consensus 82 e~i~~d~~G~l~v~~~~G~I~~~~-~g~~~-----------~~~~~~g~L~v~~~~~gl~~~~~~g-~~~l~~~~~~~~~ 148 (360)
.++++|++|.||+++.+ |++++ +|+.. .....++.||+++...+++.++.+| ...... ...
T Consensus 63 ~~~~~~~~g~l~v~t~~--l~~~d~~g~~~~~~~~~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~g~~~~~~~-~~~--- 136 (330)
T 3hxj_A 63 CRPSIGKDGTIYFGSDK--VYAINPDGTEKWRFDTKKAIVSDFTIFEDILYVTSMDGHLYAINTDGTEKWRFK-TKK--- 136 (330)
T ss_dssp ECCEETTTTEECCSSCE--EEEECCCGGGGGGSCC-----CCEEEETTEEEEECTTSEEEEECTTSCEEEEEE-CSS---
T ss_pred cceEEecCCcEEEecCc--EEEECCCCcEEEEEECCCCcccCceEECCEEEEEecCCEEEEEcCCCCEEEEEc-CCC---
Confidence 46788889999999866 99998 65311 1122388999998888999999447 332212 111
Q ss_pred cccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE-EeCCCcCcceEEEecCCCEEEEEeCC
Q 018144 149 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGFYFANGVALSRDEDYVVVCESW 227 (360)
Q Consensus 149 ~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~-~~~~l~~pngia~~~dg~~l~v~~t~ 227 (360)
.....++++++|++|++. ..++|+++|++ ++... ..........++++++|. +|++.
T Consensus 137 ~~~~~~~~~~~g~l~vgt------------------~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t-- 194 (330)
T 3hxj_A 137 AIYATPIVSEDGTIYVGS------------------NDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT-IYFGS-- 194 (330)
T ss_dssp CCCSCCEECTTSCEEEEC------------------TTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC-EEEES--
T ss_pred ceeeeeEEcCCCEEEEEc------------------CCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE-EEEEe--
Confidence 235567889999999953 34789999998 65533 332334456778888886 87776
Q ss_pred CCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCc
Q 018144 228 KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGG 307 (360)
Q Consensus 228 ~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 307 (360)
+.|++++.++...- .+. ........+++|++|++|+++..
T Consensus 195 -~~l~~~d~~g~~~~---~~~-~~~~~~~~~~~~~~g~l~v~t~~----------------------------------- 234 (330)
T 3hxj_A 195 -DKVYAINPDGTEKW---NFY-AGYWTVTRPAISEDGTIYVTSLD----------------------------------- 234 (330)
T ss_dssp -SSEEEECTTSCEEE---EEC-CSSCCCSCCEECTTSCEEEEETT-----------------------------------
T ss_pred -CEEEEECCCCcEEE---EEc-cCCcceeceEECCCCeEEEEcCC-----------------------------------
Confidence 56999984442211 111 11234667889999999999875
Q ss_pred eEEEEECCCCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCCeEEEEe
Q 018144 308 AHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQ 358 (360)
Q Consensus 308 ~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~~~ 358 (360)
++|++++++|+.+..+....+. .+.+..+ +|+||+++..+ .|.+++
T Consensus 235 ~gl~~~~~~g~~~~~~~~~~~~----~~~~~~~~~g~l~v~t~~g-gl~~~d 281 (330)
T 3hxj_A 235 GHLYAINPDGTEKWRFKTGKRI----ESSPVIGNTDTIYFGSYDG-HLYAIN 281 (330)
T ss_dssp TEEEEECTTSCEEEEEECSSCC----CSCCEECTTSCEEEECTTC-EEEEEC
T ss_pred CeEEEECCCCCEeEEeeCCCCc----cccceEcCCCeEEEecCCC-CEEEEC
Confidence 5899999999988887764432 2334455 69999998743 455543
No 64
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.45 E-value=4.9e-11 Score=110.04 Aligned_cols=228 Identities=13% Similarity=0.155 Sum_probs=142.0
Q ss_pred CCCcceEEEcCCCCEEEEec---CCeEEEEE--CCeeeEEE--------------ecCC-eEEEEeCCCc-EEEEc--CC
Q 018144 78 VNHPEDASMDKNGVIYTATR---DGWIKRLQ--DGTWVNWK--------------FIDS-HLIICDNANG-LHKVS--ED 134 (360)
Q Consensus 78 ~~~Pe~i~~d~~G~l~v~~~---~G~I~~~~--~g~~~~~~--------------~~~g-~L~v~~~~~g-l~~~~--~~ 134 (360)
...|..++++++|.||+++. ++.|+.++ +|+.+.+. .++| .||+++...+ +..++ .+
T Consensus 39 ~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~ 118 (347)
T 3hfq_A 39 TQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAAD 118 (347)
T ss_dssp CSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTT
T ss_pred cCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCC
Confidence 47899999999999998875 57888887 55432211 1234 4888885544 55555 45
Q ss_pred C-eEEEeec-cCCc------cccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCC-CCeEEEEe--
Q 018144 135 G-VENFLSY-VNGS------KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SNITTLVA-- 203 (360)
Q Consensus 135 g-~~~l~~~-~~~~------~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-tg~~~~~~-- 203 (360)
| .+.+... ..+. ....++.+++++||++|+++.. .+.|..|+.+ ++++....
T Consensus 119 g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~-----------------~~~v~~~~~~~~g~~~~~~~~ 181 (347)
T 3hfq_A 119 GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG-----------------SDKVYVYNVSDAGQLSEQSVL 181 (347)
T ss_dssp SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT-----------------TTEEEEEEECTTSCEEEEEEE
T ss_pred CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC-----------------CCEEEEEEECCCCcEEEeeeE
Confidence 5 4443221 1111 1234678999999999998653 3467666655 46554322
Q ss_pred --CCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecC--CcCcceeeeccCCC------CCCceeEEcCCCC-EEEEEec
Q 018144 204 --DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG--ERKGKLETFAENLP------GAPDNINLAPDGT-FWIAIIK 272 (360)
Q Consensus 204 --~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g--~~~~~~~~~~~~~~------g~pd~i~~d~~G~-lwva~~~ 272 (360)
.....|++++++|||+.+|+++...+.|..|+++. .+......+. ..+ ..|.+++++++|+ +|++...
T Consensus 182 ~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~i~~spdG~~l~v~~~~ 260 (347)
T 3hfq_A 182 TMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVK-TIPADYTAHNGAAAIRLSHDGHFLYVSNRG 260 (347)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEE-SSCTTCCSCCEEEEEEECTTSCEEEEEEET
T ss_pred EcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeee-ecCCCCCCCCcceeEEECCCCCEEEEEeCC
Confidence 22346889999999999999988888888888763 2211111221 111 2366799999997 7787654
Q ss_pred CchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcE--EEEEeCCCCCcccceeeEEEE-C-CEEEEEe
Q 018144 273 LDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTI--IRNLVDPTGQLMSFVTSGLQV-D-NHLYVIS 348 (360)
Q Consensus 273 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~--~~~~~~~~g~~~~~~t~~~~~-~-g~Lylgs 348 (360)
.. .-.++.++++|+. +..+... + ..+..+... + ..||+++
T Consensus 261 ~~--------------------------------~v~v~~~~~~g~~~~~~~~~~~-~---~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 261 YN--------------------------------TLAVFAVTADGHLTLIQQISTE-G---DFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp TT--------------------------------EEEEEEECGGGCEEEEEEEECS-S---SCCCEEEECTTSSEEEEEE
T ss_pred CC--------------------------------EEEEEEECCCCcEEEeEEEecC-C---CCcCeEEECCCCCEEEEEE
Confidence 10 1234455555543 3333321 2 235556665 3 5799999
Q ss_pred CCCCeEEEEeC
Q 018144 349 LTSNFIGKVQL 359 (360)
Q Consensus 349 ~~~~~i~~~~l 359 (360)
..++.|.++.+
T Consensus 305 ~~~~~v~v~~~ 315 (347)
T 3hfq_A 305 QNTDNATLYAR 315 (347)
T ss_dssp TTTTEEEEEEE
T ss_pred cCCCcEEEEEE
Confidence 98888888854
No 65
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.45 E-value=7e-12 Score=120.29 Aligned_cols=191 Identities=13% Similarity=0.092 Sum_probs=128.4
Q ss_pred CCeEEEEeCCCcEEEEc-CCC-eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEc
Q 018144 116 DSHLIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYD 193 (360)
Q Consensus 116 ~g~L~v~~~~~gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d 193 (360)
+|+|||++..+.|.+++ .++ ++.+.. .+..|++|+++++|+||++|.... ....+++.++
T Consensus 152 ~g~Lyv~D~~~~I~~id~~~g~v~~~~~-----~~~~P~giavd~dG~lyVad~~~~-------------~~~~gv~~~~ 213 (433)
T 4hw6_A 152 YDDLYWVGQRDAFRHVDFVNQYVDIKTT-----NIGQCADVNFTLNGDMVVVDDQSS-------------DTNTGIYLFT 213 (433)
T ss_dssp TCEEEEECBTSCEEEEETTTTEEEEECC-----CCSCEEEEEECTTCCEEEEECCSC-------------TTSEEEEEEC
T ss_pred CCEEEEEeCCCCEEEEECCCCEEEEeec-----CCCCccEEEECCCCCEEEEcCCCC-------------cccceEEEEE
Confidence 48999999777799999 577 666543 245799999999999999996421 0123466676
Q ss_pred CCCCeE-EEEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC-EEEEEe
Q 018144 194 PSSNIT-TLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAII 271 (360)
Q Consensus 194 ~~tg~~-~~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~ 271 (360)
+..+.. ......+..|+|+++++++..|||++..+++|++|+.++.... ...+.......+.+|++|++|+ ||++..
T Consensus 214 ~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~-~~~~~~~~~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 214 RASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLT-EEEVMMDTKGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp GGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEE-EEEEECSCCSSCEEEEECTTSSEEEEEET
T ss_pred CCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEE-EEEeccCCCCCcccEEEeCCCCEEEEEeC
Confidence 543321 1122257889999999943459999999999999998632220 1222222223456799999998 999987
Q ss_pred cCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC---CcE--EEEEeC---CCC--------Cccccee
Q 018144 272 KLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED---GTI--IRNLVD---PTG--------QLMSFVT 335 (360)
Q Consensus 272 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~---g~~--~~~~~~---~~g--------~~~~~~t 335 (360)
. ...|.+++.+ ++. ...+.. ..| ..++.+.
T Consensus 293 ~----------------------------------~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~ 338 (433)
T 4hw6_A 293 G----------------------------------KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPN 338 (433)
T ss_dssp T----------------------------------TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEE
T ss_pred C----------------------------------CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCc
Confidence 6 3578887654 221 112211 111 1355677
Q ss_pred eEEE---------E-CCEEEEEeCCCCeEEEEeC
Q 018144 336 SGLQ---------V-DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 336 ~~~~---------~-~g~Lylgs~~~~~i~~~~l 359 (360)
+++. + +|+||++...+++|.++..
T Consensus 339 giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 339 QGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp EEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred cEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 7777 4 5899999999999999863
No 66
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.43 E-value=5.4e-12 Score=120.96 Aligned_cols=188 Identities=11% Similarity=0.074 Sum_probs=127.2
Q ss_pred CCeEEEEeCCCcEEEEc-CCC-eEEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEE
Q 018144 116 DSHLIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKY 192 (360)
Q Consensus 116 ~g~L~v~~~~~gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~ 192 (360)
+++||+++..+.|.+++ ..+ ++.+.. ....|++|+++++|+ ||++|.+.. .....++.+
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~~~~-----~~~~P~~ia~d~~G~~lyvad~~~~-------------~~~~~v~~~ 210 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVSTVYS-----GLSKVRTICWTHEADSMIITNDQNN-------------NDRPNNYIL 210 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEEEEC-----CCSCEEEEEECTTSSEEEEEECCSC-------------TTSEEEEEE
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEEEec-----CCCCcceEEEeCCCCEEEEEeCCCC-------------cccceEEEE
Confidence 57899999777788898 455 665543 235799999999997 999986521 112356777
Q ss_pred cCCCCeEE--EEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC-EEEE
Q 018144 193 DPSSNITT--LVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIA 269 (360)
Q Consensus 193 d~~tg~~~--~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva 269 (360)
+++ +.+. .....+..|+++++++++..||+++...++|++|++++.... ..+.......|.+|++|++|+ +|++
T Consensus 211 ~~~-g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~--~~~~~~~~~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 211 TRE-SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT--PLFTIQDSGWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp EGG-GTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE--EEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred eCC-CceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE--EEEEcCCCCcceeEEEcCCCCEEEEE
Confidence 765 3222 122247789999999944459999999999999998754321 222211224699999999998 9999
Q ss_pred EecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCc--E---EEEEeCC-------CC----Ccccc
Q 018144 270 IIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGT--I---IRNLVDP-------TG----QLMSF 333 (360)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~--~---~~~~~~~-------~g----~~~~~ 333 (360)
... ...|.+++.++. . ...+... +| ..+..
T Consensus 288 d~~----------------------------------~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~ 333 (430)
T 3tc9_A 288 VVN----------------------------------QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHA 333 (430)
T ss_dssp ETT----------------------------------TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSS
T ss_pred ECC----------------------------------CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCC
Confidence 876 357888876642 1 1222211 11 12455
Q ss_pred ee-eEEEE---------CCEEEEEeCCCCeEEEEe
Q 018144 334 VT-SGLQV---------DNHLYVISLTSNFIGKVQ 358 (360)
Q Consensus 334 ~t-~~~~~---------~g~Lylgs~~~~~i~~~~ 358 (360)
+. .+... +|+||+++..+++|.+++
T Consensus 334 P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~ 368 (430)
T 3tc9_A 334 PRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT 368 (430)
T ss_dssp EEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC
T ss_pred CcceEEEccccccccCCCCeEEEEECCCcEEEEEC
Confidence 65 55543 379999999999999886
No 67
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.41 E-value=4.6e-11 Score=108.39 Aligned_cols=183 Identities=9% Similarity=0.070 Sum_probs=123.5
Q ss_pred EEEecCCeEEEEeCC-CcEEEEc-CCC-eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCcc
Q 018144 111 NWKFIDSHLIICDNA-NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHG 187 (360)
Q Consensus 111 ~~~~~~g~L~v~~~~-~gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g 187 (360)
.|...++.||+++.. +.|++++ .++ .+.+.. . ..+.+++++++|++|++. .+
T Consensus 19 ~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~--~----~~~~~i~~~~dG~l~v~~-------------------~~ 73 (297)
T 3g4e_A 19 VWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTM--D----APVSSVALRQSGGYVATI-------------------GT 73 (297)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTCCEEEEEC--S----SCEEEEEEBTTSSEEEEE-------------------TT
T ss_pred eEECCCCEEEEEECCCCEEEEEECCCCcEEEEeC--C----CceEEEEECCCCCEEEEE-------------------CC
Confidence 344446888888865 5788888 555 544321 1 357899999999999963 24
Q ss_pred EEEEEcCCCCeEEEEeC-----CCcCcceEEEecCCCEEEEEeC-----------CCCEEEEEEecCCcCcceeeeccCC
Q 018144 188 QLLKYDPSSNITTLVAD-----GFYFANGVALSRDEDYVVVCES-----------WKFRCRKYWLKGERKGKLETFAENL 251 (360)
Q Consensus 188 ~l~~~d~~tg~~~~~~~-----~l~~pngia~~~dg~~l~v~~t-----------~~~~i~~~~~~g~~~~~~~~~~~~~ 251 (360)
+|+++|+++++++.+.. ....+|++++++||+ +|+++. ..++|++++.++. .......
T Consensus 74 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~----~~~~~~~- 147 (297)
T 3g4e_A 74 KFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH----VKKYFDQ- 147 (297)
T ss_dssp EEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC----EEEEEEE-
T ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC----EEEEeec-
Confidence 79999999888876543 234689999999998 778763 2357888886542 2222211
Q ss_pred CCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEEC---CCCcEE--EEEeC
Q 018144 252 PGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA---EDGTII--RNLVD 325 (360)
Q Consensus 252 ~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~---~~g~~~--~~~~~ 325 (360)
...|++++++++|+ +|++... .+.|.+++ .+|+.. +.+..
T Consensus 148 ~~~pngi~~spdg~~lyv~~~~----------------------------------~~~i~~~~~d~~~G~~~~~~~~~~ 193 (297)
T 3g4e_A 148 VDISNGLDWSLDHKIFYYIDSL----------------------------------SYSVDAFDYDLQTGQISNRRSVYK 193 (297)
T ss_dssp ESBEEEEEECTTSCEEEEEEGG----------------------------------GTEEEEEEECTTTCCEEEEEEEEE
T ss_pred cccccceEEcCCCCEEEEecCC----------------------------------CCcEEEEeccCCCCcccCcEEEEE
Confidence 23589999999995 8888765 24666664 456542 22322
Q ss_pred CCCCcccceeeEEEE-CCEEEEEeCCCCeEEEEeC
Q 018144 326 PTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 326 ~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~~~l 359 (360)
... ....+.++..+ +|+||+++..++.|.+++.
T Consensus 194 ~~~-~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~ 227 (297)
T 3g4e_A 194 LEK-EEQIPDGMCIDAEGKLWVACYNGGRVIRLDP 227 (297)
T ss_dssp CCG-GGCEEEEEEEBTTSCEEEEEETTTEEEEECT
T ss_pred CCC-CCCCCCeeEECCCCCEEEEEcCCCEEEEEcC
Confidence 111 01346677776 5999999999999999874
No 68
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.40 E-value=4.2e-10 Score=103.33 Aligned_cols=206 Identities=14% Similarity=0.166 Sum_probs=140.6
Q ss_pred CCcceEEEcCCCC-EEEEe-cCCeEEEEE--CCeee-E-------------------EEe--cCCeEEEEeC--CCcEEE
Q 018144 79 NHPEDASMDKNGV-IYTAT-RDGWIKRLQ--DGTWV-N-------------------WKF--IDSHLIICDN--ANGLHK 130 (360)
Q Consensus 79 ~~Pe~i~~d~~G~-l~v~~-~~G~I~~~~--~g~~~-~-------------------~~~--~~g~L~v~~~--~~gl~~ 130 (360)
..|.+++++++|. +|+++ .++.|..++ +++.. . +.. .++.+|+++. ...++.
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~ 168 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWV 168 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEE
Confidence 4689999999887 88888 578899998 45321 1 111 2456898874 245888
Q ss_pred Ec-CCC-eEEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC---
Q 018144 131 VS-EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--- 204 (360)
Q Consensus 131 ~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~--- 204 (360)
++ .++ ....... .+ ..+++++++++|+ +|+++. .+.|+.+|..+++......
T Consensus 169 ~d~~~~~~~~~~~~-~~---~~~~~~~~s~dg~~l~~~~~------------------~~~i~~~d~~~~~~~~~~~~~~ 226 (353)
T 3vgz_A 169 VDGGNIKLKTAIQN-TG---KMSTGLALDSEGKRLYTTNA------------------DGELITIDTADNKILSRKKLLD 226 (353)
T ss_dssp EETTTTEEEEEECC-CC---TTCCCCEEETTTTEEEEECT------------------TSEEEEEETTTTEEEEEEECCC
T ss_pred EcCCCCceEEEecC-CC---CccceEEECCCCCEEEEEcC------------------CCeEEEEECCCCeEEEEEEcCC
Confidence 88 566 3322111 11 2478999999985 777532 4689999998887654322
Q ss_pred --CCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHh
Q 018144 205 --GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKIL 281 (360)
Q Consensus 205 --~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~ 281 (360)
....++++++++||+.+|+++...+.|..|+.+..+. ...+. . +.|.+++++++|+ +|++...
T Consensus 227 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~--~-~~~~~~~~s~dg~~l~v~~~~--------- 292 (353)
T 3vgz_A 227 DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI--LAKVA--A-PESLAVLFNPARNEAYVTHRQ--------- 292 (353)
T ss_dssp SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE--EEEEE--C-SSCCCEEEETTTTEEEEEETT---------
T ss_pred CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE--EEEEE--c-CCCceEEECCCCCEEEEEECC---------
Confidence 1345778999999999999998888999999854321 11221 1 2367899999997 8888764
Q ss_pred hcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEE-C-CEEEEEeCC
Q 018144 282 NSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-D-NHLYVISLT 350 (360)
Q Consensus 282 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~-g~Lylgs~~ 350 (360)
.+.|..+|. +++++..+..+. .+..+... + ..||+++..
T Consensus 293 -------------------------~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 293 -------------------------AGKVSVIDAKSYKVVKTFDTPT-----HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp -------------------------TTEEEEEETTTTEEEEEEECCS-----EEEEEEECTTSCEEEEEEEC
T ss_pred -------------------------CCeEEEEECCCCeEEEEEecCC-----CCCeEEEcCCCCEEEEEEcc
Confidence 357888886 577777776532 35566665 3 569998765
No 69
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.39 E-value=4.8e-11 Score=110.69 Aligned_cols=174 Identities=13% Similarity=0.170 Sum_probs=119.6
Q ss_pred CCCCCcceEEEcCCCCEEEEec------CCeEEEEE--CCee-eEEE----------------e--cCCeEEEEeC---C
Q 018144 76 GSVNHPEDASMDKNGVIYTATR------DGWIKRLQ--DGTW-VNWK----------------F--IDSHLIICDN---A 125 (360)
Q Consensus 76 ~~~~~Pe~i~~d~~G~l~v~~~------~G~I~~~~--~g~~-~~~~----------------~--~~g~L~v~~~---~ 125 (360)
+.+..|.+|++|++|+||+.+. .++|++++ +|+. ..+. . .+|.+||++. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 3478999999999999999883 47899999 5762 2221 1 2468999986 3
Q ss_pred -CcEEEEc-CCC-eEEEeec------------cCCccc-------------cccccEEEcCCC-cEEEEeCCCCCCCccc
Q 018144 126 -NGLHKVS-EDG-VENFLSY------------VNGSKL-------------RFANDVVEASDG-SLYFTVSSSKYLPHEY 176 (360)
Q Consensus 126 -~gl~~~~-~~g-~~~l~~~------------~~~~~~-------------~~~n~l~~d~dG-~l~vtd~~~~~~~~~~ 176 (360)
.+++.++ .++ ...+... .++..+ ..+|+|++++|| .+|+++..
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~-------- 215 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH-------- 215 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS--------
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC--------
Confidence 6788888 566 4433211 011111 247999999999 59998754
Q ss_pred eecccccCCccEEEEEcCC---CCe---------EEEEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEe-cCCcCcc
Q 018144 177 CLDILEGKPHGQLLKYDPS---SNI---------TTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWL-KGERKGK 243 (360)
Q Consensus 177 ~~~~~~~~~~g~l~~~d~~---tg~---------~~~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~-~g~~~~~ 243 (360)
..+|++++.. .+. +... .....|+|++++++|+ +|+++...++|.+|+. +|.
T Consensus 216 ---------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~~~G~---- 280 (343)
T 2qe8_A 216 ---------STSMYRIKSADLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHN-IYVGDLAHSAIGVITSADRA---- 280 (343)
T ss_dssp ---------CSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCC-EEEEEGGGTEEEEEETTTTE----
T ss_pred ---------CCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCCceEEECCCCC-EEEEccCCCeEEEEECCCCC----
Confidence 3478888642 111 1111 1234799999999986 9999999999999998 442
Q ss_pred eeeeccC-CCCCCceeEEcCCCCEEEEEec
Q 018144 244 LETFAEN-LPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 244 ~~~~~~~-~~g~pd~i~~d~~G~lwva~~~ 272 (360)
...+... ....|++++++++|++||+...
T Consensus 281 ~~~~~~~~~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 281 YKLLVTDEKLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp EEEEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred EEEEEECCceecCCeeEECCCCcEEEEeCc
Confidence 2333221 1236999999999999999875
No 70
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.38 E-value=2.7e-11 Score=110.38 Aligned_cols=168 Identities=13% Similarity=0.134 Sum_probs=116.5
Q ss_pred CCcceEEEcCCCCEEEEec-CCeEEEEE-CCeeeEE----------------EecCCeEEEEeC----------------
Q 018144 79 NHPEDASMDKNGVIYTATR-DGWIKRLQ-DGTWVNW----------------KFIDSHLIICDN---------------- 124 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v~~~-~G~I~~~~-~g~~~~~----------------~~~~g~L~v~~~---------------- 124 (360)
..|.++++|++|+||+++. +++|++++ +|+.+.+ ...+|+||+++.
T Consensus 86 ~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~ 165 (305)
T 3dr2_A 86 AFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPE 165 (305)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCS
T ss_pred CccceeeECCCCCEEEEECCCCEEEEECCCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccc
Confidence 5689999999999999984 57899998 7755432 124788999652
Q ss_pred --CCcEEEEc-CCC-eEEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeE
Q 018144 125 --ANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT 199 (360)
Q Consensus 125 --~~gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~ 199 (360)
..+|++++ .+| ++.+. . +..|+++++++||+ ||++|..... ...++|++|+.+++.+
T Consensus 166 ~~~~~v~~~d~~~g~~~~~~-~-----~~~p~gl~~spdg~~lyv~~~~~~~------------~~~~~i~~~~~~~~~l 227 (305)
T 3dr2_A 166 LAHHSVYRLPPDGSPLQRMA-D-----LDHPNGLAFSPDEQTLYVSQTPEQG------------HGSVEITAFAWRDGAL 227 (305)
T ss_dssp SSCEEEEEECSSSCCCEEEE-E-----ESSEEEEEECTTSSEEEEEECCC---------------CCCEEEEEEEETTEE
T ss_pred cCCCeEEEEcCCCCcEEEEe-c-----CCCCcceEEcCCCCEEEEEecCCcC------------CCCCEEEEEEecCCCc
Confidence 24689999 467 66653 2 35689999999996 9998764110 0125788887654432
Q ss_pred E---EEeC-CCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCC-CEEEEEec
Q 018144 200 T---LVAD-GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDG-TFWIAIIK 272 (360)
Q Consensus 200 ~---~~~~-~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G-~lwva~~~ 272 (360)
. .+.. ....|.|++++++|+ +|++. .++|.+|++++.... .+. .+..|.+++++++| .||+++..
T Consensus 228 ~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~--~~gv~~~~~~g~~~~---~~~--~~~~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 228 HDRRHFASVPDGLPDGFCVDRGGW-LWSSS--GTGVCVFDSDGQLLG---HIP--TPGTASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp EEEEEEECCSSSCCCSEEECTTSC-EEECC--SSEEEEECTTSCEEE---EEE--CSSCCCEEEECTTSCEEEEEETT
T ss_pred cCCeEEEECCCCCCCeEEECCCCC-EEEec--CCcEEEECCCCCEEE---EEE--CCCceeEEEEeCCCCEEEEEcCC
Confidence 1 1221 245689999999998 88887 357999998764332 222 22348899998777 59998865
No 71
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.37 E-value=2.6e-10 Score=102.61 Aligned_cols=212 Identities=11% Similarity=0.095 Sum_probs=140.4
Q ss_pred CCcceEEEcCCCCEEEEecCCeEEEEE-CCeee-EE------------EecCCeEEEEeCC-C-cEEEEcCCC--eEEEe
Q 018144 79 NHPEDASMDKNGVIYTATRDGWIKRLQ-DGTWV-NW------------KFIDSHLIICDNA-N-GLHKVSEDG--VENFL 140 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v~~~~G~I~~~~-~g~~~-~~------------~~~~g~L~v~~~~-~-gl~~~~~~g--~~~l~ 140 (360)
..+.+++++++|++++ +.+++|+.++ +|+.. .+ ...+|++++++.. . .++.++++| +..+.
T Consensus 37 ~~~~~~~~~pdG~ilv-s~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~ 115 (276)
T 3no2_A 37 WECNSVAATKAGEILF-SYSKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTE 115 (276)
T ss_dssp CCCCEEEECTTSCEEE-ECBSEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEE
T ss_pred CCCcCeEECCCCCEEE-eCCCCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEe
Confidence 4688999999999999 5566788888 66421 11 1236778887765 3 577788777 33332
Q ss_pred eccC-CccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCC
Q 018144 141 SYVN-GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDED 219 (360)
Q Consensus 141 ~~~~-~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~ 219 (360)
.... ......+..+.++++|++++++.. .++|+.+|++ |+..........|.++...++|+
T Consensus 116 ~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-----------------~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~ 177 (276)
T 3no2_A 116 FETGIERPHAQFRQINKNKKGNYLVPLFA-----------------TSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGD 177 (276)
T ss_dssp ECCSCSSGGGSCSCCEECTTSCEEEEETT-----------------TTEEEEECTT-SCEEEEEECSSCCCEEEECTTSC
T ss_pred ccCCCCcccccccCceECCCCCEEEEecC-----------------CCEEEEECCC-CCEEEEEECCCCccceeEcCCCC
Confidence 1111 122346778899999999998653 5789999998 76654433335688899999997
Q ss_pred EEEEEeCCCCEEEEEEec-CCcCcceeeeccCCC----CCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhC
Q 018144 220 YVVVCESWKFRCRKYWLK-GERKGKLETFAENLP----GAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAY 294 (360)
Q Consensus 220 ~l~v~~t~~~~i~~~~~~-g~~~~~~~~~~~~~~----g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~ 294 (360)
+++++..+++|..++++ |+..-++.. ...+ ..|.++.+.++|+++|+....... + .
T Consensus 178 -~~v~~~~~~~v~~~d~~tG~~~w~~~~--~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~--~---~----------- 238 (276)
T 3no2_A 178 -CLVACGDAHCFVQLNLESNRIVRRVNA--NDIEGVQLFFVAQLFPLQNGGLYICNWQGHDR--E---A----------- 238 (276)
T ss_dssp -EEEECBTTSEEEEECTTTCCEEEEEEG--GGSBSCCCSEEEEEEECTTSCEEEEEECTTCT--T---G-----------
T ss_pred -EEEEeCCCCeEEEEeCcCCcEEEEecC--CCCCCccccccccceEcCCCCEEEEeccCccc--c---c-----------
Confidence 66777777899999987 543222211 1111 247889999999999998642100 0 0
Q ss_pred CccccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEE
Q 018144 295 PKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGL 338 (360)
Q Consensus 295 ~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~ 338 (360)
.......+++++++|+++..|.+... +..++++.
T Consensus 239 --------~~~~~~~~~~~~~~g~~~W~~~~~~~--~~~~~~~~ 272 (276)
T 3no2_A 239 --------GKGKHPQLVEIDSEGKVVWQLNDKVK--FGMISTIC 272 (276)
T ss_dssp --------GGSCCCSEEEECTTSBEEEEECCTTT--SCCCCEEE
T ss_pred --------cccCCceEEEECCCCCEEEEecCccc--ccceeeee
Confidence 00013479999999999999877543 45566653
No 72
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.37 E-value=2.6e-11 Score=117.08 Aligned_cols=198 Identities=12% Similarity=0.119 Sum_probs=132.6
Q ss_pred CCeEEEEeCC-CcEEEEc-CCC-eEEEeeccCCccccccccEEE-------cCCCc-EEEEeCCCCCCCccceecccccC
Q 018144 116 DSHLIICDNA-NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVE-------ASDGS-LYFTVSSSKYLPHEYCLDILEGK 184 (360)
Q Consensus 116 ~g~L~v~~~~-~gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~-------d~dG~-l~vtd~~~~~~~~~~~~~~~~~~ 184 (360)
+++|||++.. +++.++| +++ ++.+..... ..+..|++|++ +++|. ||++|...... .
T Consensus 151 ~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~-~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~-----------~ 218 (496)
T 3kya_A 151 KDHLYICYDGHKAIQLIDLKNRMLSSPLNINT-IPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG-----------D 218 (496)
T ss_dssp EEEEEEEEETEEEEEEEETTTTEEEEEECCTT-SSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG-----------G
T ss_pred CCEEEEEECCCCeEEEEECCCCEEEEEEccCc-cccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc-----------c
Confidence 4789999875 5788899 666 777654322 24567999999 99996 99998752100 0
Q ss_pred CccEEEEEcCCC-CeEE-----EEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEec-------CCcCc-----c---
Q 018144 185 PHGQLLKYDPSS-NITT-----LVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLK-------GERKG-----K--- 243 (360)
Q Consensus 185 ~~g~l~~~d~~t-g~~~-----~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~-------g~~~~-----~--- 243 (360)
....++.++++. |++. .....+..|+|++++++++.||+++...++|++|+++ +.... .
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred cCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 123577786543 3332 1222567899999999777799999999999999987 33320 0
Q ss_pred -e-eeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCc--
Q 018144 244 -L-ETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGT-- 318 (360)
Q Consensus 244 -~-~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~-- 318 (360)
. +.+.......|.+|++|++|+ +||+... ...|.+++.++.
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~----------------------------------~h~I~kid~dg~~~ 344 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVIN----------------------------------NHYFMRSDYDEIKK 344 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETT----------------------------------TTEEEEEEEETTTT
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCC----------------------------------CCEEEEEecCCCcc
Confidence 1 222211223588999999998 8999876 358888776553
Q ss_pred EE---EEEeC---C----CC----Cccccee-eEEEE--------CCEEEEEeCCCCeEEEEeC
Q 018144 319 II---RNLVD---P----TG----QLMSFVT-SGLQV--------DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 319 ~~---~~~~~---~----~g----~~~~~~t-~~~~~--------~g~Lylgs~~~~~i~~~~l 359 (360)
.+ ..+.. . +| ..++.+. .+..+ +|.||++...+++|.++..
T Consensus 345 ~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~ 408 (496)
T 3kya_A 345 EFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP 408 (496)
T ss_dssp EECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT
T ss_pred eecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC
Confidence 22 22221 1 12 1356677 55654 4899999999999999863
No 73
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.35 E-value=5.4e-10 Score=101.98 Aligned_cols=225 Identities=11% Similarity=0.100 Sum_probs=140.1
Q ss_pred CCCcceEEEcCCCC-EEEEe-cCCeEEEEE--CCee-e-E----------EE-ecCC-eEEEEeCCC---cEEEEc-CCC
Q 018144 78 VNHPEDASMDKNGV-IYTAT-RDGWIKRLQ--DGTW-V-N----------WK-FIDS-HLIICDNAN---GLHKVS-EDG 135 (360)
Q Consensus 78 ~~~Pe~i~~d~~G~-l~v~~-~~G~I~~~~--~g~~-~-~----------~~-~~~g-~L~v~~~~~---gl~~~~-~~g 135 (360)
...| +++++++|. +|+++ .++.|+.++ +++. . . +. .++| .||++.... .+..++ .++
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~ 118 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN 118 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC
Confidence 4566 999999886 88888 488999999 5553 1 1 11 1234 466433332 577777 556
Q ss_pred -eEEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCc-cEEEEEcCCCCeEE----EEeCCCcC
Q 018144 136 -VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPH-GQLLKYDPSSNITT----LVADGFYF 208 (360)
Q Consensus 136 -~~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~-g~l~~~d~~tg~~~----~~~~~l~~ 208 (360)
....... + ..++++++++||+ +|+++... .. -.++.++.+ +.+. ........
T Consensus 119 ~~~~~~~~--~---~~~~~~~~spdg~~l~~~~~~~---------------~~~i~~~~~~~~-g~~~~~~~~~~~~~~~ 177 (331)
T 3u4y_A 119 KFISTIPI--P---YDAVGIAISPNGNGLILIDRSS---------------ANTVRRFKIDAD-GVLFDTGQEFISGGTR 177 (331)
T ss_dssp EEEEEEEC--C---TTEEEEEECTTSSCEEEEEETT---------------TTEEEEEEECTT-CCEEEEEEEEECSSSS
T ss_pred CeEEEEEC--C---CCccceEECCCCCEEEEEecCC---------------CceEEEEEECCC-CcEeecCCccccCCCC
Confidence 3222111 1 2468999999995 99986431 11 134455433 3321 12233456
Q ss_pred cceEEEecCCCEEEEEeCCCCEEEEEEecCCcC-cceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchh
Q 018144 209 ANGVALSRDEDYVVVCESWKFRCRKYWLKGERK-GKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKL 286 (360)
Q Consensus 209 pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~-~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~ 286 (360)
|.++++++||+.+|++....+.|..|+++..+. .....+. ....|.+++++++|+ +|++...
T Consensus 178 ~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~-------------- 241 (331)
T 3u4y_A 178 PFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG--TNNLPGTIVVSRDGSTVYVLTES-------------- 241 (331)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE--CSSCCCCEEECTTSSEEEEECSS--------------
T ss_pred ccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc--CCCCCceEEECCCCCEEEEEEcC--------------
Confidence 899999999999999998888999999864332 1122222 234688999999998 7887654
Q ss_pred HHHHHHhCCccccccccCCCceEEEEECCC-CcE--EEEEeCC---CCCcccceeeEEEE--CCEEEEEeCCCCeEEEEe
Q 018144 287 IKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTI--IRNLVDP---TGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQ 358 (360)
Q Consensus 287 ~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~--~~~~~~~---~g~~~~~~t~~~~~--~g~Lylgs~~~~~i~~~~ 358 (360)
.+.|..+|.+ |++ +..+... .+........+... +.+||+++..++.|.+++
T Consensus 242 --------------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d 301 (331)
T 3u4y_A 242 --------------------TVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFT 301 (331)
T ss_dssp --------------------EEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEE
T ss_pred --------------------CCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEE
Confidence 3578888865 555 3333221 11111111334443 467999999999999988
Q ss_pred CC
Q 018144 359 LS 360 (360)
Q Consensus 359 l~ 360 (360)
++
T Consensus 302 ~~ 303 (331)
T 3u4y_A 302 IS 303 (331)
T ss_dssp TT
T ss_pred ec
Confidence 64
No 74
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.33 E-value=1.2e-10 Score=106.68 Aligned_cols=187 Identities=14% Similarity=0.133 Sum_probs=124.5
Q ss_pred cCCeEEEEeCC-CcEEEEc-CCC-eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEE
Q 018144 115 IDSHLIICDNA-NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLK 191 (360)
Q Consensus 115 ~~g~L~v~~~~-~gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~ 191 (360)
.+|+||+++.. .+|++++ .++ ++.+.... ...+.+++++++|++|+++... ....++|++
T Consensus 54 ~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~----~~~~~~i~~~~dg~l~v~~~~~-------------~~~~~~i~~ 116 (333)
T 2dg1_A 54 RQGQLFLLDVFEGNIFKINPETKEIKRPFVSH----KANPAAIKIHKDGRLFVCYLGD-------------FKSTGGIFA 116 (333)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEEEEEECS----SSSEEEEEECTTSCEEEEECTT-------------SSSCCEEEE
T ss_pred CCCCEEEEECCCCEEEEEeCCCCcEEEEeeCC----CCCcceEEECCCCcEEEEeCCC-------------CCCCceEEE
Confidence 57889987654 5799999 566 55543211 1358899999999999986431 001258999
Q ss_pred EcCCCCeEEEEeC---CCcCcceEEEecCCCEEEEEeCC------CCEEEEEEecCCcCcceeeeccCCCCCCceeEEcC
Q 018144 192 YDPSSNITTLVAD---GFYFANGVALSRDEDYVVVCESW------KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAP 262 (360)
Q Consensus 192 ~d~~tg~~~~~~~---~l~~pngia~~~dg~~l~v~~t~------~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~ 262 (360)
+|+++++.+.+.. ....+++++++++|+ +|++... ..+|++++.++.+. ..+... ...|.++++++
T Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~-~~~~~~i~~~~ 191 (333)
T 2dg1_A 117 ATENGDNLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRTV---TPIIQN-ISVANGIALST 191 (333)
T ss_dssp ECTTSCSCEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCCE---EEEEEE-ESSEEEEEECT
T ss_pred EeCCCCEEEEEEccCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCEE---EEeecC-CCcccceEECC
Confidence 9998887764332 234689999999997 7787764 36799998764322 222211 12478999999
Q ss_pred CCC-EEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC--CCcEEEEE-----eCCCCCcccce
Q 018144 263 DGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE--DGTIIRNL-----VDPTGQLMSFV 334 (360)
Q Consensus 263 ~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~--~g~~~~~~-----~~~~g~~~~~~ 334 (360)
+|+ +|++... .+.|.+++. +|+.+..+ ....+ ...+
T Consensus 192 dg~~l~v~~~~----------------------------------~~~i~~~d~~~~g~~~~~~~~~~~~~~~~--~~~~ 235 (333)
T 2dg1_A 192 DEKVLWVTETT----------------------------------ANRLHRIALEDDGVTIQPFGATIPYYFTG--HEGP 235 (333)
T ss_dssp TSSEEEEEEGG----------------------------------GTEEEEEEECTTSSSEEEEEEEEEEECCS--SSEE
T ss_pred CCCEEEEEeCC----------------------------------CCeEEEEEecCCCcCcccccceEEEecCC--CCCC
Confidence 996 9998754 246777775 55543322 11112 1245
Q ss_pred eeEEEE-CCEEEEEeCCCCeEEEEeC
Q 018144 335 TSGLQV-DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 335 t~~~~~-~g~Lylgs~~~~~i~~~~l 359 (360)
..+..+ +|+||+++..++.|.+++.
T Consensus 236 ~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 236 DSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp EEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred CceEECCCCCEEEEEcCCCEEEEECC
Confidence 667776 5899999988888988864
No 75
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.33 E-value=2.9e-10 Score=101.23 Aligned_cols=205 Identities=11% Similarity=0.109 Sum_probs=133.9
Q ss_pred ceEecCCCCCCcceEEEcCCCCEEEEec---CCeEEEEE--CCeeeEEEecCCeEEEEeCCCcEEEEcCCCeEEEeeccC
Q 018144 70 FIKVGEGSVNHPEDASMDKNGVIYTATR---DGWIKRLQ--DGTWVNWKFIDSHLIICDNANGLHKVSEDGVENFLSYVN 144 (360)
Q Consensus 70 ~~~~~~~~~~~Pe~i~~d~~G~l~v~~~---~G~I~~~~--~g~~~~~~~~~g~L~v~~~~~gl~~~~~~g~~~l~~~~~ 144 (360)
...++.+.-..|++++++++|.||+++. ++.|.++| +|++..- +. .+
T Consensus 12 v~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~--------------------------i~--l~ 63 (266)
T 2iwa_A 12 LNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENI--------------------------HK--MD 63 (266)
T ss_dssp EEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEE--------------------------EE--CC
T ss_pred EEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEE--------------------------Ee--cC
Confidence 3455555445688999988788888863 34566666 4443221 10 01
Q ss_pred CccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEE
Q 018144 145 GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVC 224 (360)
Q Consensus 145 ~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~ 224 (360)
. ..+..+++++ +++||+++.. .+.++.||+++.++....... .|.|+.+++||+.+|++
T Consensus 64 ~--~~fgeGi~~~-g~~lyv~t~~-----------------~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs 122 (266)
T 2iwa_A 64 D--SYFGEGLTLL-NEKLYQVVWL-----------------KNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGS 122 (266)
T ss_dssp T--TCCEEEEEEE-TTEEEEEETT-----------------CSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEE
T ss_pred C--CcceEEEEEe-CCEEEEEEec-----------------CCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEE
Confidence 1 1234466776 3589998532 578999999888765433211 47788888899999999
Q ss_pred eCCCCEEEEEEecCCcC-cceeeeccCCC-CCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccc
Q 018144 225 ESWKFRCRKYWLKGERK-GKLETFAENLP-GAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFI 302 (360)
Q Consensus 225 ~t~~~~i~~~~~~g~~~-~~~~~~~~~~~-g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 302 (360)
+ +.+.|..+|++..+. ....+-....+ ..|+.+.+. +|.+|++.+.
T Consensus 123 ~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~------------------------------ 170 (266)
T 2iwa_A 123 D-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQ------------------------------ 170 (266)
T ss_dssp C-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT------------------------------
T ss_pred C-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCC------------------------------
Confidence 8 578999999865322 11111110011 146677777 7899998875
Q ss_pred cCCCceEEEEECC-CCcEEEEEeCCCC---------CcccceeeEEEE--CCEEEEEeCCCCeEEEEeC
Q 018144 303 TLGGGAHLIHVAE-DGTIIRNLVDPTG---------QLMSFVTSGLQV--DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 303 ~~~~~~~v~~~~~-~g~~~~~~~~~~g---------~~~~~~t~~~~~--~g~Lylgs~~~~~i~~~~l 359 (360)
.+.|.++|+ .|+++..+.-+.. .......++..+ +++||+++-..+.|.+++|
T Consensus 171 ----~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 171 ----TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp ----SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred ----CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 368999997 6889888865310 011345677776 3799999999999999876
No 76
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.31 E-value=1.3e-09 Score=98.03 Aligned_cols=177 Identities=13% Similarity=0.181 Sum_probs=122.5
Q ss_pred ecCCeEEEEeCCCcEEEEcCCC--eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEE
Q 018144 114 FIDSHLIICDNANGLHKVSEDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLK 191 (360)
Q Consensus 114 ~~~g~L~v~~~~~gl~~~~~~g--~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~ 191 (360)
.++|++++ +..++++.++++| +..+... .. ..++.+.+.++|++++++.. ..++++.
T Consensus 45 ~pdG~ilv-s~~~~V~~~d~~G~~~W~~~~~-~~---~~~~~~~~~~dG~~lv~~~~----------------~~~~v~~ 103 (276)
T 3no2_A 45 TKAGEILF-SYSKGAKMITRDGRELWNIAAP-AG---CEMQTARILPDGNALVAWCG----------------HPSTILE 103 (276)
T ss_dssp CTTSCEEE-ECBSEEEEECTTSCEEEEEECC-TT---CEEEEEEECTTSCEEEEEES----------------TTEEEEE
T ss_pred CCCCCEEE-eCCCCEEEECCCCCEEEEEcCC-CC---ccccccEECCCCCEEEEecC----------------CCCEEEE
Confidence 35788998 4567899999777 3333221 11 13456788899999998642 1468999
Q ss_pred EcCCCCeEEEEe--C----CCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC
Q 018144 192 YDPSSNITTLVA--D----GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT 265 (360)
Q Consensus 192 ~d~~tg~~~~~~--~----~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~ 265 (360)
+|++...+..+. . ....+.+++..++|+ ++++....++|..|+.+|+..-+ + ..++.|.+....++|+
T Consensus 104 vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~~~~v~~~d~~G~~~w~---~--~~~~~~~~~~~~~~g~ 177 (276)
T 3no2_A 104 VNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEVREIAPNGQLLNS---V--KLSGTPFSSAFLDNGD 177 (276)
T ss_dssp ECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEETTTTEEEEECTTSCEEEE---E--ECSSCCCEEEECTTSC
T ss_pred EeCCCCEEEEEeccCCCCcccccccCceECCCCC-EEEEecCCCEEEEECCCCCEEEE---E--ECCCCccceeEcCCCC
Confidence 998633333322 1 123577889999998 66788888999999987543222 1 1234577889999999
Q ss_pred EEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEeCC--CCCcccceeeEEEE-C
Q 018144 266 FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDP--TGQLMSFVTSGLQV-D 341 (360)
Q Consensus 266 lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~--~g~~~~~~t~~~~~-~ 341 (360)
++|+... .+.|+.+|++ |+++..+... .+..+..++++... +
T Consensus 178 ~~v~~~~----------------------------------~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~ 223 (276)
T 3no2_A 178 CLVACGD----------------------------------AHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQN 223 (276)
T ss_dssp EEEECBT----------------------------------TSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTT
T ss_pred EEEEeCC----------------------------------CCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCC
Confidence 9998765 3589999998 9999998743 23335567777665 6
Q ss_pred CEEEEEeCCC
Q 018144 342 NHLYVISLTS 351 (360)
Q Consensus 342 g~Lylgs~~~ 351 (360)
|++|+++..+
T Consensus 224 G~i~v~~~~g 233 (276)
T 3no2_A 224 GGLYICNWQG 233 (276)
T ss_dssp SCEEEEEECT
T ss_pred CCEEEEeccC
Confidence 9999999744
No 77
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.31 E-value=2.1e-10 Score=106.90 Aligned_cols=201 Identities=13% Similarity=0.164 Sum_probs=124.6
Q ss_pred ecCCeEEEEeCCCcEEEEcCCC-eEEEeec-cCCccccccccEEEcCC----CcEEEEeCCCCCCCccceecccccCCcc
Q 018144 114 FIDSHLIICDNANGLHKVSEDG-VENFLSY-VNGSKLRFANDVVEASD----GSLYFTVSSSKYLPHEYCLDILEGKPHG 187 (360)
Q Consensus 114 ~~~g~L~v~~~~~gl~~~~~~g-~~~l~~~-~~~~~~~~~n~l~~d~d----G~l~vtd~~~~~~~~~~~~~~~~~~~~g 187 (360)
.++|+|||++....|++++ +| .+.+... ........|++|+++++ |.||+++.... ....+
T Consensus 39 ~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~------------~~~~~ 105 (352)
T 2ism_A 39 LPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAE------------GGLRN 105 (352)
T ss_dssp CTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECT------------TSSEE
T ss_pred cCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCC------------CCCcc
Confidence 3578899998777788887 56 4444321 11112357899999997 79999875310 00125
Q ss_pred EEEEEcCCCCe---EEEEeC-------CCcCcceEEEecCCCEEEEEeC-------------CCCEEEEEEecCCcC---
Q 018144 188 QLLKYDPSSNI---TTLVAD-------GFYFANGVALSRDEDYVVVCES-------------WKFRCRKYWLKGERK--- 241 (360)
Q Consensus 188 ~l~~~d~~tg~---~~~~~~-------~l~~pngia~~~dg~~l~v~~t-------------~~~~i~~~~~~g~~~--- 241 (360)
+|.+++.++++ .+.+.+ ..+.++++++++||. ||++.. ..++|+|++.+|...
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~n 184 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGN 184 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCC
Confidence 78898876442 222221 245789999999995 999963 236899999876210
Q ss_pred -------cceeeeccCCCCCCceeEEcC-CCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEE
Q 018144 242 -------GKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHV 313 (360)
Q Consensus 242 -------~~~~~~~~~~~g~pd~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~ 313 (360)
...+++...+ ..|.++++|+ +|+||++..+.... +. .| ...|.++
T Consensus 185 pf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~-----------~~----~~-----------~dei~~i 237 (352)
T 2ism_A 185 PFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGE-----------QG----YG-----------HDEVNLI 237 (352)
T ss_dssp TTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC---------------------C-----------CCEEEEE
T ss_pred cccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCC-----------CC----CC-----------CeEEEEe
Confidence 1233443222 2489999999 89999999873210 00 00 1234444
Q ss_pred CCCCc-----------------EEEEEeCCCCCcccceeeEEEECCEEEEEeCCCCeEEEEeCC
Q 018144 314 AEDGT-----------------IIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQLS 360 (360)
Q Consensus 314 ~~~g~-----------------~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~~~i~~~~l~ 360 (360)
.+.+. .+..+ +. ...++++...+|+||++++.+.+|.+++++
T Consensus 238 ~~G~nyGwp~~~g~~~~~~~~~p~~~~--~~---~~ap~G~~~~~G~l~v~~~~~~~v~~v~~~ 296 (352)
T 2ism_A 238 VPGGNYGWPRVVGRGNDPRYRDPLYFW--PQ---GFPPGNLAFFRGDLYVAGLRGQALLRLVLE 296 (352)
T ss_dssp CTTCBCCTTTCCSCCCCTTSCCCSEEC--TT---CCCEEEEEEETTEEEEEETTTTEEEEEEEE
T ss_pred ccCCcCCCCcccCCCCCCCCcCCeEec--CC---CCCCcceEEECCEEEEEECCCCEEEEEEEC
Confidence 43221 11111 10 124677888899999999999999998763
No 78
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.30 E-value=1.1e-11 Score=125.95 Aligned_cols=133 Identities=14% Similarity=0.138 Sum_probs=89.1
Q ss_pred CCeEEEEeCC-CcEEEEcCCC--eEEEeeccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEE
Q 018144 116 DSHLIICDNA-NGLHKVSEDG--VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLK 191 (360)
Q Consensus 116 ~g~L~v~~~~-~gl~~~~~~g--~~~l~~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~ 191 (360)
+++||+++.. +.|.+++.+| .+.+.. ..+..|++|++|+ .|.||+||.. ..++|++
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~----~~~~~P~giavDp~~g~ly~td~~----------------~~~~I~~ 523 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFR----EQGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKK 523 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECC----CSSCCCCCEECCSSSSCCEECCCS----------------SSCCEEB
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEe----CCCCCcceEEEccCCCcEEEcccC----------------CCCeEEE
Confidence 4555555543 3455555333 333321 1135689999997 5789998854 1257888
Q ss_pred EcCCCCeEEEE-eCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccC--CCCCCceeEEcCCCCEEE
Q 018144 192 YDPSSNITTLV-ADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN--LPGAPDNINLAPDGTFWI 268 (360)
Q Consensus 192 ~d~~tg~~~~~-~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~--~~g~pd~i~~d~~G~lwv 268 (360)
++++....+.+ ...+..||||+++++++.|||+++..++|.+++++|.. .+.+... ....|++|++|.+ +||+
T Consensus 524 ~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~~~P~glavd~~-~lyw 599 (699)
T 1n7d_A 524 GGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFED-KVFW 599 (699)
T ss_dssp CCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC---CEEECCCSSSCSSCCCCEEETT-EEEE
T ss_pred EeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc---eEEEEecCCcCCCceEeEEECC-EEEE
Confidence 88764333333 34688999999999888899999999999999998632 2333321 2347999999986 6777
Q ss_pred EEec
Q 018144 269 AIIK 272 (360)
Q Consensus 269 a~~~ 272 (360)
+.+.
T Consensus 600 td~~ 603 (699)
T 1n7d_A 600 TDII 603 (699)
T ss_dssp ECST
T ss_pred EeCC
Confidence 7765
No 79
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.26 E-value=1.4e-09 Score=101.47 Aligned_cols=147 Identities=9% Similarity=0.033 Sum_probs=95.3
Q ss_pred ecCCeEEEEeCCCcEEEEcCCCeEEEee-ccCCccccccccEEEcCC----CcEEEEeCC-CCCCCccceecccccCCcc
Q 018144 114 FIDSHLIICDNANGLHKVSEDGVENFLS-YVNGSKLRFANDVVEASD----GSLYFTVSS-SKYLPHEYCLDILEGKPHG 187 (360)
Q Consensus 114 ~~~g~L~v~~~~~gl~~~~~~g~~~l~~-~~~~~~~~~~n~l~~d~d----G~l~vtd~~-~~~~~~~~~~~~~~~~~~g 187 (360)
.++|+|||++....|++++.+|.+.+.. .........+.+|+++++ |.||++++. .. .+...+
T Consensus 37 ~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~-----------~~~~~~ 105 (354)
T 3a9g_A 37 LGGGRYLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAE-----------GGHIRN 105 (354)
T ss_dssp EETTEEEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECG-----------GGCEEE
T ss_pred cCCCeEEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCC-----------CCCcce
Confidence 3578999999887788887555322221 111112346899999996 899998642 00 001125
Q ss_pred EEEEEcCCCC--e---EEEEe-----CCCcCcceEEEecCCCEEEEEeCC-------------CCEEEEEEecCCcC---
Q 018144 188 QLLKYDPSSN--I---TTLVA-----DGFYFANGVALSRDEDYVVVCESW-------------KFRCRKYWLKGERK--- 241 (360)
Q Consensus 188 ~l~~~d~~tg--~---~~~~~-----~~l~~pngia~~~dg~~l~v~~t~-------------~~~i~~~~~~g~~~--- 241 (360)
+|++++.+.+ . .+.+. ...+.++++++++||. ||++... .++|+|++.+|...
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 7889887644 1 22222 1345789999999996 9998532 35899999876411
Q ss_pred --cceeeeccCCCCCCceeEEcC-CCCEEEEEecC
Q 018144 242 --GKLETFAENLPGAPDNINLAP-DGTFWIAIIKL 273 (360)
Q Consensus 242 --~~~~~~~~~~~g~pd~i~~d~-~G~lwva~~~~ 273 (360)
...+++...+ ..|.++++|+ +|+||++....
T Consensus 185 pf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~ 218 (354)
T 3a9g_A 185 PFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGP 218 (354)
T ss_dssp SSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCS
T ss_pred CCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCC
Confidence 0234554322 2589999999 89999999873
No 80
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.26 E-value=1.3e-09 Score=105.10 Aligned_cols=157 Identities=14% Similarity=0.187 Sum_probs=103.8
Q ss_pred eEecCCCCCCcceEEEcCCCCEEEEecCC-eEEEEE--CCeeeE-------------------EEec-----CCeEEEEe
Q 018144 71 IKVGEGSVNHPEDASMDKNGVIYTATRDG-WIKRLQ--DGTWVN-------------------WKFI-----DSHLIICD 123 (360)
Q Consensus 71 ~~~~~~~~~~Pe~i~~d~~G~l~v~~~~G-~I~~~~--~g~~~~-------------------~~~~-----~g~L~v~~ 123 (360)
+.+..+ +..|++|+++++|.||++...| +|++++ +|+.+. ++.. ++.|||+.
T Consensus 20 ~~~a~~-l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 20 KVILSN-LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp EEEECC-CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred EEEECC-CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 455554 8999999999999999999765 799998 464332 2222 57799987
Q ss_pred CC-------------CcEEEEc-C--CC-e---EEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCC-----ccce-
Q 018144 124 NA-------------NGLHKVS-E--DG-V---ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLP-----HEYC- 177 (360)
Q Consensus 124 ~~-------------~gl~~~~-~--~g-~---~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~-----~~~~- 177 (360)
.. ..|++++ . ++ + +.+...........++.|++++||+|||+........ ....
T Consensus 99 s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~ 178 (454)
T 1cru_A 99 TFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQA 178 (454)
T ss_dssp EEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCT
T ss_pred eccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCcccccccccc
Confidence 52 3677776 2 22 2 3343333333346789999999999999964321100 0000
Q ss_pred ---------ecccccCCccEEEEEcCCCC-----------eEEEEeCCCcCcceEEEecCCCEEEEEeCCCC
Q 018144 178 ---------LDILEGKPHGQLLKYDPSSN-----------ITTLVADGFYFANGVALSRDEDYVVVCESWKF 229 (360)
Q Consensus 178 ---------~~~~~~~~~g~l~~~d~~tg-----------~~~~~~~~l~~pngia~~~dg~~l~v~~t~~~ 229 (360)
..--.....|.|+|++++.. ..+.+..++..|.|++++++|+ ||+++.+..
T Consensus 179 ~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~-L~~~d~g~~ 249 (454)
T 1cru_A 179 QHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGK-LLQSEQGPN 249 (454)
T ss_dssp TCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSC-EEEEEECSS
T ss_pred ccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCC-EEEEecCCC
Confidence 00000123589999999744 3466778899999999999876 999997543
No 81
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.26 E-value=4.3e-10 Score=102.47 Aligned_cols=155 Identities=14% Similarity=0.128 Sum_probs=108.3
Q ss_pred cccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCCC
Q 018144 149 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK 228 (360)
Q Consensus 149 ~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~~ 228 (360)
..|.+++++++|+||++|.. .++|+++|++++ ..........|+|+++++||+ +|+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~-----------------~~~I~~~d~~g~-~~~~~~~~~~p~gia~~~dG~-l~vad~~~ 92 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHE-----------------VGEIVSITPDGN-QQIHATVEGKVSGLAFTSNGD-LVATGWNA 92 (306)
T ss_dssp CCEEEEEECTTSCEEEEETT-----------------TTEEEEECTTCC-EEEEEECSSEEEEEEECTTSC-EEEEEECT
T ss_pred CCcceEEECCCCCEEEEeCC-----------------CCeEEEECCCCc-eEEEEeCCCCceeEEEcCCCc-EEEEeccC
Confidence 46899999999999999853 568999999854 443333345799999999998 89999653
Q ss_pred --CEEEEEEecCCcCcceeeeccC-CCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCC
Q 018144 229 --FRCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLG 305 (360)
Q Consensus 229 --~~i~~~~~~g~~~~~~~~~~~~-~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 305 (360)
.+|++++....+ .+.+.+. ...++++++.+.++++|++...
T Consensus 93 ~~~~v~~~d~~~g~---~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~--------------------------------- 136 (306)
T 2p4o_A 93 DSIPVVSLVKSDGT---VETLLTLPDAIFLNGITPLSDTQYLTADSY--------------------------------- 136 (306)
T ss_dssp TSCEEEEEECTTSC---EEEEEECTTCSCEEEEEESSSSEEEEEETT---------------------------------
T ss_pred CcceEEEEcCCCCe---EEEEEeCCCccccCcccccCCCcEEEEECC---------------------------------
Confidence 458888864332 3333221 2236888888888889998754
Q ss_pred CceEEEEECCCCcEEEEE-e-------CCCCCcccceeeEEEECCEEEEEeCCCCeEEEEeCC
Q 018144 306 GGAHLIHVAEDGTIIRNL-V-------DPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQLS 360 (360)
Q Consensus 306 ~~~~v~~~~~~g~~~~~~-~-------~~~g~~~~~~t~~~~~~g~Lylgs~~~~~i~~~~l~ 360 (360)
.+.|+++|+++.....+ . .+.+. +..+.++..++++||+++..+++|.+++++
T Consensus 137 -~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~-~~~pngis~dg~~lyv~d~~~~~I~~~~~~ 197 (306)
T 2p4o_A 137 -RGAIWLIDVVQPSGSIWLEHPMLARSNSESV-FPAANGLKRFGNFLYVSNTEKMLLLRIPVD 197 (306)
T ss_dssp -TTEEEEEETTTTEEEEEEECGGGSCSSTTCC-SCSEEEEEEETTEEEEEETTTTEEEEEEBC
T ss_pred -CCeEEEEeCCCCcEeEEEECCccccccccCC-CCcCCCcCcCCCEEEEEeCCCCEEEEEEeC
Confidence 36899999865321111 1 11111 345566655678999999999999999864
No 82
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.24 E-value=1.6e-08 Score=93.62 Aligned_cols=229 Identities=16% Similarity=0.218 Sum_probs=135.8
Q ss_pred CCCcceEEEcCCCC-EEEEecC----CeEE--EEE-C-CeeeEE-------------EecCCeEEEEeCCCc-EEEEc--
Q 018144 78 VNHPEDASMDKNGV-IYTATRD----GWIK--RLQ-D-GTWVNW-------------KFIDSHLIICDNANG-LHKVS-- 132 (360)
Q Consensus 78 ~~~Pe~i~~d~~G~-l~v~~~~----G~I~--~~~-~-g~~~~~-------------~~~~g~L~v~~~~~g-l~~~~-- 132 (360)
...|..++++++|. ||+++.+ |.|. .++ + |+.+.+ ...+..||+++...+ +..++
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~ 128 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIG 128 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBC
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeC
Confidence 57899999999986 7887764 6664 455 3 644322 222445788776544 44555
Q ss_pred CCC-eEEEee--ccCCc-------cccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEE--EEEcCCCC--
Q 018144 133 EDG-VENFLS--YVNGS-------KLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQL--LKYDPSSN-- 197 (360)
Q Consensus 133 ~~g-~~~l~~--~~~~~-------~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l--~~~d~~tg-- 197 (360)
.++ +..+.. ...+. ....++++++++||+ +|+++.. .+.+ +.++..++
T Consensus 129 ~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-----------------~~~v~v~~~~~~~~~~ 191 (361)
T 3scy_A 129 QDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG-----------------TDQIHKFNINPNANAD 191 (361)
T ss_dssp TTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEEECTTCCTT
T ss_pred CCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC-----------------CCEEEEEEEcCCCCcc
Confidence 333 321110 01110 112457799999996 8998643 2344 44455544
Q ss_pred --e-E-------EEEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccC--CCCCCceeEEcCCCC
Q 018144 198 --I-T-------TLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN--LPGAPDNINLAPDGT 265 (360)
Q Consensus 198 --~-~-------~~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~--~~g~pd~i~~d~~G~ 265 (360)
+ + .........|++++++|||+.+|++....+.|..|+++.........+... ....|.+++++++|+
T Consensus 192 ~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~ 271 (361)
T 3scy_A 192 NKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGK 271 (361)
T ss_dssp TCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSS
T ss_pred cccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCC
Confidence 2 2 112233457899999999999999998788999999864332222222111 112356899999997
Q ss_pred -EEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcE--EEEEeCCCCCcccceeeEEEE-
Q 018144 266 -FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTI--IRNLVDPTGQLMSFVTSGLQV- 340 (360)
Q Consensus 266 -lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~--~~~~~~~~g~~~~~~t~~~~~- 340 (360)
||++.... ...-.|+.+++ +|+. +..+.. |. .+..+...
T Consensus 272 ~l~v~~~~~-------------------------------~~~i~v~~~~~~~g~~~~~~~~~~--g~---~~~~~~~sp 315 (361)
T 3scy_A 272 YLYASNRLK-------------------------------ADGVAIFKVDETNGTLTKVGYQLT--GI---HPRNFIITP 315 (361)
T ss_dssp EEEEEECSS-------------------------------SCEEEEEEECTTTCCEEEEEEEEC--SS---CCCEEEECT
T ss_pred EEEEECCCC-------------------------------CCEEEEEEEcCCCCcEEEeeEecC--CC---CCceEEECC
Confidence 66765430 01135666774 4653 333333 32 34556665
Q ss_pred C-CEEEEEeCCCCeEEEEeC
Q 018144 341 D-NHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 341 ~-g~Lylgs~~~~~i~~~~l 359 (360)
+ ..||+++..++.|.++.+
T Consensus 316 dg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 316 NGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp TSCEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEECCCCCEEEEEE
Confidence 3 569999988899988654
No 83
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.23 E-value=2.9e-10 Score=104.62 Aligned_cols=165 Identities=12% Similarity=0.099 Sum_probs=114.1
Q ss_pred CCcceEEEcCCCCEEEEecCCeEEEEE--CCeeeEE----------------EecCCeEEEEeCC-------CcEEEEcC
Q 018144 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNW----------------KFIDSHLIICDNA-------NGLHKVSE 133 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v~~~~G~I~~~~--~g~~~~~----------------~~~~g~L~v~~~~-------~gl~~~~~ 133 (360)
..|.+++++++|.+|+++.+ +|++++ +|+.+.+ ...+|++|+++.. .++++++
T Consensus 90 ~~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~- 167 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIASDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA- 167 (326)
T ss_dssp SCEEEEEEEETTEEEEEETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-
T ss_pred CcceEEEEeCCCeEEEEECC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-
Confidence 46889999999999999854 599998 5654322 1246789998752 4788888
Q ss_pred CC-eEEEeeccCCccccccccEEEcCCC-cEEEEeCCCCCCCccceecccccCCccEEEEEcCC--CC-eE---EEEe--
Q 018144 134 DG-VENFLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS--SN-IT---TLVA-- 203 (360)
Q Consensus 134 ~g-~~~l~~~~~~~~~~~~n~l~~d~dG-~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~--tg-~~---~~~~-- 203 (360)
+| ++.+... ...++++++++|| .+|++|.. .++|+++|.+ +| ++ +.+.
T Consensus 168 ~g~~~~~~~~-----~~~~~~i~~s~dg~~lyv~~~~-----------------~~~I~~~d~~~~~Gl~~~~~~~~~~~ 225 (326)
T 2ghs_A 168 KGKVTKLFAD-----ISIPNSICFSPDGTTGYFVDTK-----------------VNRLMRVPLDARTGLPTGKAEVFIDS 225 (326)
T ss_dssp TTEEEEEEEE-----ESSEEEEEECTTSCEEEEEETT-----------------TCEEEEEEBCTTTCCBSSCCEEEEEC
T ss_pred CCcEEEeeCC-----CcccCCeEEcCCCCEEEEEECC-----------------CCEEEEEEcccccCCcccCceEEEEC
Confidence 67 6554322 2357899999999 49998753 4578888864 55 32 1221
Q ss_pred -CCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEc-CCC-CEEEEEec
Q 018144 204 -DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLA-PDG-TFWIAIIK 272 (360)
Q Consensus 204 -~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d-~~G-~lwva~~~ 272 (360)
.....|.+++++++|+ +|++....++|.+|++++... ..+. .....|.+++++ +++ .|||++..
T Consensus 226 ~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~g~~~---~~i~-~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 226 TGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTDGNHI---ARYE-VPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp TTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTTCCEE---EEEE-CSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCCCCEE---EEEE-CCCCCcEEEEEecCCCCEEEEEecC
Confidence 1235689999999997 888887778999999855322 2222 111247788887 665 69998865
No 84
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.21 E-value=2.7e-08 Score=92.76 Aligned_cols=218 Identities=14% Similarity=0.158 Sum_probs=147.6
Q ss_pred CCcceEEEcCCCC-EEEEe-cCCeEEEEE--CCeeeE----------EEe--cCCeEEEEeCC-CcEEEEc-CCC-eEEE
Q 018144 79 NHPEDASMDKNGV-IYTAT-RDGWIKRLQ--DGTWVN----------WKF--IDSHLIICDNA-NGLHKVS-EDG-VENF 139 (360)
Q Consensus 79 ~~Pe~i~~d~~G~-l~v~~-~~G~I~~~~--~g~~~~----------~~~--~~g~L~v~~~~-~gl~~~~-~~g-~~~l 139 (360)
..|.+++++++|. ||++. .++.|..++ +++... +.. .+..||++... +.+..++ .++ ....
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~ 111 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGT 111 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEE
Confidence 4688999999886 66665 788999998 554322 111 23458887755 5677777 566 3222
Q ss_pred eeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCC
Q 018144 140 LSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDE 218 (360)
Q Consensus 140 ~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg 218 (360)
... + ..+.+++++++|+ +|++.. ..+.|..+|..+++..........++++++++|+
T Consensus 112 ~~~--~---~~~~~~~~s~dg~~l~~~~~-----------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg 169 (391)
T 1l0q_A 112 VKT--G---KSPLGLALSPDGKKLYVTNN-----------------GDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDG 169 (391)
T ss_dssp EEC--S---SSEEEEEECTTSSEEEEEET-----------------TTTEEEEEETTTTEEEEEEECCSSEEEEEECTTS
T ss_pred EeC--C---CCcceEEECCCCCEEEEEeC-----------------CCCEEEEEECCCCcEEEEEecCCCcceEEECCCC
Confidence 221 1 2467899999996 778743 3578999999888876655555678999999999
Q ss_pred CEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchhHHHHHHhCCcc
Q 018144 219 DYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 297 (360)
Q Consensus 219 ~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 297 (360)
+.+|++....+.|..+++...+. ...+. ....+..++++++|+ +|++....
T Consensus 170 ~~l~~~~~~~~~v~~~d~~~~~~--~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~------------------------ 221 (391)
T 1l0q_A 170 TKVYVANFDSMSISVIDTVTNSV--IDTVK--VEAAPSGIAVNPEGTKAYVTNVDK------------------------ 221 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEE--EEEEE--CSSEEEEEEECTTSSEEEEEEECS------------------------
T ss_pred CEEEEEeCCCCEEEEEECCCCeE--EEEEe--cCCCccceEECCCCCEEEEEecCc------------------------
Confidence 99999988888999999864321 11221 233577889999995 67766410
Q ss_pred ccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEE--CCEEEEEeCCCCeEEEEeC
Q 018144 298 FSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 298 ~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~--~g~Lylgs~~~~~i~~~~l 359 (360)
..+.|..+|. +++.+..+.... .+..+... +.+||+++-..+.|.++++
T Consensus 222 --------~~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 222 --------YFNTVSMIDTGTNKITARIPVGP-----DPAGIAVTPDGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp --------SCCEEEEEETTTTEEEEEEECCS-----SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred --------CCCcEEEEECCCCeEEEEEecCC-----CccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence 0257888885 466666665432 34555554 3578888888888888875
No 85
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.20 E-value=7.5e-09 Score=94.29 Aligned_cols=211 Identities=14% Similarity=0.109 Sum_probs=135.3
Q ss_pred CCCEEEEe-cCCeEEEEE--CCeeeE----------EEe-cCC-eEEEEeCC-CcEEEEc-CCC-e-EEEeeccCCcccc
Q 018144 89 NGVIYTAT-RDGWIKRLQ--DGTWVN----------WKF-IDS-HLIICDNA-NGLHKVS-EDG-V-ENFLSYVNGSKLR 149 (360)
Q Consensus 89 ~G~l~v~~-~~G~I~~~~--~g~~~~----------~~~-~~g-~L~v~~~~-~gl~~~~-~~g-~-~~l~~~~~~~~~~ 149 (360)
.+.+|+++ .++.|..++ +++... +.. ++| .||+++.. ..++.++ .++ . ...... + .
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--~---~ 83 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFVDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE--G---Q 83 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEEEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE--C---S
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc--C---C
Confidence 55677777 677788887 454321 111 244 48888874 5688888 566 4 332222 1 2
Q ss_pred cccc-EEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCCC
Q 018144 150 FAND-VVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK 228 (360)
Q Consensus 150 ~~n~-l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~~ 228 (360)
.+.. ++++++|+..++... ....+.|..+|.++++..........|++++++|||+.+|+++...
T Consensus 84 ~~~~~~~~s~dg~~l~~~~~--------------~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 149 (331)
T 3u4y_A 84 SSMADVDITPDDQFAVTVTG--------------LNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSS 149 (331)
T ss_dssp SCCCCEEECTTSSEEEECCC--------------SSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETT
T ss_pred CCccceEECCCCCEEEEecC--------------CCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCC
Confidence 3556 999999974443221 0011279999998888766555556789999999999899998876
Q ss_pred CE-EEEEEecCCc-Ccc--eeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchhHHHHHHhCCcccccccc
Q 018144 229 FR-CRKYWLKGER-KGK--LETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFIT 303 (360)
Q Consensus 229 ~~-i~~~~~~g~~-~~~--~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 303 (360)
+. |..|+++... ... ...+ .....|.+++++++|+ +|++...
T Consensus 150 ~~~i~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~spdg~~l~v~~~~------------------------------- 196 (331)
T 3u4y_A 150 ANTVRRFKIDADGVLFDTGQEFI--SGGTRPFNITFTPDGNFAFVANLI------------------------------- 196 (331)
T ss_dssp TTEEEEEEECTTCCEEEEEEEEE--CSSSSEEEEEECTTSSEEEEEETT-------------------------------
T ss_pred CceEEEEEECCCCcEeecCCccc--cCCCCccceEECCCCCEEEEEeCC-------------------------------
Confidence 67 8888876321 111 1111 1223588999999997 8888764
Q ss_pred CCCceEEEEECC-CCcE---EEEEeCCCCCcccceeeEEEE-C-CEEEEEeCCCCeEEEEeC
Q 018144 304 LGGGAHLIHVAE-DGTI---IRNLVDPTGQLMSFVTSGLQV-D-NHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 304 ~~~~~~v~~~~~-~g~~---~~~~~~~~g~~~~~~t~~~~~-~-g~Lylgs~~~~~i~~~~l 359 (360)
.+.|..++. +++. +..+... ..+..+... + ..||+++...+.|.++++
T Consensus 197 ---~~~v~v~d~~~~~~~~~~~~~~~~-----~~~~~~~~spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 197 ---GNSIGILETQNPENITLLNAVGTN-----NLPGTIVVSRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp ---TTEEEEEECSSTTSCEEEEEEECS-----SCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred ---CCeEEEEECCCCcccceeeeccCC-----CCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence 246777775 4666 6656532 134455554 3 558998888888888775
No 86
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.20 E-value=7.7e-09 Score=95.14 Aligned_cols=176 Identities=16% Similarity=0.178 Sum_probs=112.7
Q ss_pred CCCcceEEEcCCCC-EEEEe-cCCeEEEEE---CCeeeE----------------------EE-ecCCeEEEEeCCCc-E
Q 018144 78 VNHPEDASMDKNGV-IYTAT-RDGWIKRLQ---DGTWVN----------------------WK-FIDSHLIICDNANG-L 128 (360)
Q Consensus 78 ~~~Pe~i~~d~~G~-l~v~~-~~G~I~~~~---~g~~~~----------------------~~-~~~g~L~v~~~~~g-l 128 (360)
...|.+++++++|. ||+++ .++.|..++ +|.... +. .++|++|+++...+ +
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v 164 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKV 164 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEE
Confidence 46899999999986 88888 667777666 343211 11 23566898887644 6
Q ss_pred EEEc-C-CC-eEEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccE--EEEEcCCCCeEEEE
Q 018144 129 HKVS-E-DG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQ--LLKYDPSSNITTLV 202 (360)
Q Consensus 129 ~~~~-~-~g-~~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~--l~~~d~~tg~~~~~ 202 (360)
..++ . +| +....... ......|+++++++||+ +|+++.. .+. ++.++..+++++..
T Consensus 165 ~~~~~~~~g~~~~~~~~~-~~~g~~p~~~~~spdg~~l~v~~~~-----------------~~~v~v~~~~~~~g~~~~~ 226 (347)
T 3hfq_A 165 YVYNVSDAGQLSEQSVLT-MEAGFGPRHLVFSPDGQYAFLAGEL-----------------SSQIASLKYDTQTGAFTQL 226 (347)
T ss_dssp EEEEECTTSCEEEEEEEE-CCTTCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEEEETTTTEEEEE
T ss_pred EEEEECCCCcEEEeeeEE-cCCCCCCceEEECCCCCEEEEEeCC-----------------CCEEEEEEecCCCCceEEe
Confidence 6666 4 56 54432211 11113578899999997 8887643 234 45555545765432
Q ss_pred eC--C-------CcCcceEEEecCCCEEEEEeCCCCEEEEEEecCC-cCcceeeeccCCCCCCceeEEcCCCC-EEEEEe
Q 018144 203 AD--G-------FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGE-RKGKLETFAENLPGAPDNINLAPDGT-FWIAII 271 (360)
Q Consensus 203 ~~--~-------l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~-~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~ 271 (360)
.. . ...|.+++++|||++||++....+.|..|+++.. .......+. .....|.+++++++|+ ||++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~ 305 (347)
T 3hfq_A 227 GIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIS-TEGDFPRDFDLDPTEAFVVVVNQ 305 (347)
T ss_dssp EEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEE-CSSSCCCEEEECTTSSEEEEEET
T ss_pred eeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEe-cCCCCcCeEEECCCCCEEEEEEc
Confidence 21 1 1347789999999999999988889999998632 111122221 1223589999999997 788765
Q ss_pred c
Q 018144 272 K 272 (360)
Q Consensus 272 ~ 272 (360)
.
T Consensus 306 ~ 306 (347)
T 3hfq_A 306 N 306 (347)
T ss_dssp T
T ss_pred C
Confidence 4
No 87
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.18 E-value=1.8e-08 Score=91.68 Aligned_cols=175 Identities=12% Similarity=0.124 Sum_probs=108.6
Q ss_pred CCcceEEEcCCCC-EEEEecC-CeEEEEE-C---CeeeEE------------E-ecCC-eEEEEeCCCc-EEEEc-CCC-
Q 018144 79 NHPEDASMDKNGV-IYTATRD-GWIKRLQ-D---GTWVNW------------K-FIDS-HLIICDNANG-LHKVS-EDG- 135 (360)
Q Consensus 79 ~~Pe~i~~d~~G~-l~v~~~~-G~I~~~~-~---g~~~~~------------~-~~~g-~L~v~~~~~g-l~~~~-~~g- 135 (360)
..|.+++++++|. ||+++.+ +.|..++ + |+.+.+ . .++| .||+++...+ +..++ .++
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~ 117 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL 117 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTE
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCc
Confidence 5799999999887 8888854 8887766 3 433221 1 1233 4888876544 66666 344
Q ss_pred eEEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCC-CeEEEE------eCCCc
Q 018144 136 VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NITTLV------ADGFY 207 (360)
Q Consensus 136 ~~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t-g~~~~~------~~~l~ 207 (360)
........... ..+++++++++|+ +|+++.. .+.|..||..+ +++... .....
T Consensus 118 ~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~-----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 178 (343)
T 1ri6_A 118 PVGVVDVVEGL--DGCHSANISPDNRTLWVPALK-----------------QDRICLFTVSDDGHLVAQDPAEVTTVEGA 178 (343)
T ss_dssp EEEEEEEECCC--TTBCCCEECTTSSEEEEEEGG-----------------GTEEEEEEECTTSCEEEEEEEEEECSTTC
T ss_pred cccccccccCC--CCceEEEECCCCCEEEEecCC-----------------CCEEEEEEecCCCceeeecccccccCCCC
Confidence 22222222221 3488999999995 8886522 45788888765 655422 12234
Q ss_pred CcceEEEecCCCEEEEEeCCCCEEEEEEecC--CcCcceeeeccCC-----CCCCceeEEcCCCC-EEEEEec
Q 018144 208 FANGVALSRDEDYVVVCESWKFRCRKYWLKG--ERKGKLETFAENL-----PGAPDNINLAPDGT-FWIAIIK 272 (360)
Q Consensus 208 ~pngia~~~dg~~l~v~~t~~~~i~~~~~~g--~~~~~~~~~~~~~-----~g~pd~i~~d~~G~-lwva~~~ 272 (360)
.|+++++++|++.+|++....+.|..|+++. .+......+.... ...|..++++++|+ +|++...
T Consensus 179 ~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~ 251 (343)
T 1ri6_A 179 GPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT 251 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC
Confidence 7889999999999999987788999999853 2221122221111 11344699999995 6666543
No 88
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.18 E-value=4.8e-08 Score=90.89 Aligned_cols=235 Identities=14% Similarity=0.089 Sum_probs=133.8
Q ss_pred CCCcceEEEcCCCC-EEEEecCCeEEEEE---CCeeeEEE-------------ecCCe-EEE--Ee-------------C
Q 018144 78 VNHPEDASMDKNGV-IYTATRDGWIKRLQ---DGTWVNWK-------------FIDSH-LII--CD-------------N 124 (360)
Q Consensus 78 ~~~Pe~i~~d~~G~-l~v~~~~G~I~~~~---~g~~~~~~-------------~~~g~-L~v--~~-------------~ 124 (360)
...|..++++++|. ||+++.+ .|..++ +|+..... .++|+ ||+ ++ .
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 45799999999987 7877765 676665 56543221 12455 343 32 2
Q ss_pred CCcEEEEc--CCC-eEEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCC-CCeE
Q 018144 125 ANGLHKVS--EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SNIT 199 (360)
Q Consensus 125 ~~gl~~~~--~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-tg~~ 199 (360)
...+..++ .+| ...............++++++++||+ +|++|.. .+.|..||.+ +|+.
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~-----------------~~~v~~~~~~~~g~~ 180 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT-----------------ANKLWTHRKLASGEV 180 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEEECTTSCE
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC-----------------CCEEEEEEECCCCCE
Confidence 22344444 355 33211111000124688999999995 8887643 3467777766 6766
Q ss_pred EEEe--C---CCcCcceEEEecCCCEEEEEeCCCCEEEEEEecC--CcCcc-eeeecc---CCCC---------CCceeE
Q 018144 200 TLVA--D---GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG--ERKGK-LETFAE---NLPG---------APDNIN 259 (360)
Q Consensus 200 ~~~~--~---~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g--~~~~~-~~~~~~---~~~g---------~pd~i~ 259 (360)
+... . ....|.+++++|||+.+|++....+.|..|+.+. .+... ...+.. ...+ .|.+++
T Consensus 181 ~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 260 (365)
T 1jof_A 181 ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVC 260 (365)
T ss_dssp EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEE
T ss_pred EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEE
Confidence 4321 1 1456899999999999999987777888887652 11110 111111 1111 367899
Q ss_pred -EcCCCC-EEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEE---EeCCCCCcccce
Q 018144 260 -LAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRN---LVDPTGQLMSFV 334 (360)
Q Consensus 260 -~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~---~~~~~g~~~~~~ 334 (360)
+++||+ ||++....... ....-.++.++++|+.... ....... ...
T Consensus 261 ~~spdG~~l~v~~~~~~~~---------------------------~~~~i~v~~~~~~g~~~~~~~~~~~~~~~--~~~ 311 (365)
T 1jof_A 261 ALTFSGKYMFASSRANKFE---------------------------LQGYIAGFKLRDCGSIEKQLFLSPTPTSG--GHS 311 (365)
T ss_dssp EECTTSSEEEEEEEESSTT---------------------------SCCEEEEEEECTTSCEEEEEEEEECSSCC--TTC
T ss_pred EECCCCCEEEEECCCCCCC---------------------------CCCeEEEEEECCCCCEEEeeeeeecCCCC--ccc
Confidence 999996 78776541000 0001235555556775542 2221111 011
Q ss_pred eeEEE---ECCEEEEEeCCCCeEEEEeC
Q 018144 335 TSGLQ---VDNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 335 t~~~~---~~g~Lylgs~~~~~i~~~~l 359 (360)
-.+.. ++++||+++..++.|.++++
T Consensus 312 ~a~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 312 NAVSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp CCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred ceecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 12334 46789999988888888764
No 89
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.14 E-value=1.6e-08 Score=93.47 Aligned_cols=195 Identities=9% Similarity=0.074 Sum_probs=124.2
Q ss_pred ecCCeEEEEeC-CCcEEEEc-CCC-eEEEeec--cCCccccccccEEEcC----CCcEEEEeCCCCCCCccceecccccC
Q 018144 114 FIDSHLIICDN-ANGLHKVS-EDG-VENFLSY--VNGSKLRFANDVVEAS----DGSLYFTVSSSKYLPHEYCLDILEGK 184 (360)
Q Consensus 114 ~~~g~L~v~~~-~~gl~~~~-~~g-~~~l~~~--~~~~~~~~~n~l~~d~----dG~l~vtd~~~~~~~~~~~~~~~~~~ 184 (360)
.++|+|||+.. ...|++++ .+| .+.+... ........+.+|++++ +|.||++.+. .
T Consensus 40 ~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~---------------~ 104 (347)
T 3das_A 40 LPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS---------------A 104 (347)
T ss_dssp CTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC---------------S
T ss_pred cCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec---------------C
Confidence 35789999997 45688888 456 5444221 1122235688999997 4899997542 1
Q ss_pred CccEEEEEcCCCC--------eEEEEeC-----CCcCcceEEEecCCCEEEEEe-------------CCCCEEEEEEecC
Q 018144 185 PHGQLLKYDPSSN--------ITTLVAD-----GFYFANGVALSRDEDYVVVCE-------------SWKFRCRKYWLKG 238 (360)
Q Consensus 185 ~~g~l~~~d~~tg--------~~~~~~~-----~l~~pngia~~~dg~~l~v~~-------------t~~~~i~~~~~~g 238 (360)
..++|.|+..+.+ +.+.+.. ..++.+.|++++||. ||++. ...++|+|++.+|
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG 183 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGKILRMTPDG 183 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEEECTTS
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCCCCCEEEEEeCCC
Confidence 2457888865431 2233222 345677899999996 99984 2357899999886
Q ss_pred CcC-----cceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEE
Q 018144 239 ERK-----GKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHV 313 (360)
Q Consensus 239 ~~~-----~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~ 313 (360)
... ...+++...+ ..|.++++|++|.||++..+... ...|.++
T Consensus 184 ~ip~~nPf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~~-------------------------------~deln~i 231 (347)
T 3das_A 184 EPAPGNPFPGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQDT-------------------------------WDELNAI 231 (347)
T ss_dssp SBCTTCSSTTCCEEEBCC-SBCCEEEECTTCCEEEEECCSSS-------------------------------CEEEEEE
T ss_pred CccCCCCCCCCeEEeeCC-CCcceEEECCCCCEEEEecCCCC-------------------------------CceeeEE
Confidence 411 1234554322 24899999999999999987321 1233333
Q ss_pred CCCCcE-----------------EEEEeCCCCCcccceeeEEEECCEEEEEeCCCCeEEEEeCC
Q 018144 314 AEDGTI-----------------IRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQLS 360 (360)
Q Consensus 314 ~~~g~~-----------------~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~~~i~~~~l~ 360 (360)
.+.+.. +..+. +. ...++++.+.+|.+|++.+.+.+|.+++++
T Consensus 232 ~~G~nyGwP~~~g~~~~~~~~~P~~~~~-~~---~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~ 291 (347)
T 3das_A 232 KPGDNYGWPEAEGKGGGSGFHDPVAQWS-TD---EASPSGIAYAEGSVWMAGLRGERLWRIPLK 291 (347)
T ss_dssp CTTCBCCTTTCCSSCCCTTCCCCSEEEC-TT---TCCEEEEEEETTEEEEEESTTCSEEEEEEE
T ss_pred cCCCEecCCcccCCCCCccccCCcEecC-CC---CCCCcceEEEcCceeeccccCCEEEEEEec
Confidence 221110 11111 00 125678899999999999999999999863
No 90
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.12 E-value=2.8e-08 Score=87.93 Aligned_cols=180 Identities=13% Similarity=0.211 Sum_probs=117.0
Q ss_pred CCCCCcceEEEcC-CCCEEEEe-cCCeEEEEE-CCeeeE------------EEe-cCCeEEEEeCC-CcEEEEc--CCC-
Q 018144 76 GSVNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DGTWVN------------WKF-IDSHLIICDNA-NGLHKVS--EDG- 135 (360)
Q Consensus 76 ~~~~~Pe~i~~d~-~G~l~v~~-~~G~I~~~~-~g~~~~------------~~~-~~g~L~v~~~~-~gl~~~~--~~g- 135 (360)
|....+.++++|+ ++.||+.+ .++.|++++ +|++.. ++. .+|++||++.. ++++.++ .++
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~ 103 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSE 103 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCC
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCe
Confidence 4446899999997 46799755 788999999 775432 121 35678888754 5677776 334
Q ss_pred eEEEee-ccC---CccccccccEEEcCCC-cEEEEeCCCCCCCccceecccccCCccEEEEEc--CCCCeEEEEeC----
Q 018144 136 VENFLS-YVN---GSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYD--PSSNITTLVAD---- 204 (360)
Q Consensus 136 ~~~l~~-~~~---~~~~~~~n~l~~d~dG-~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d--~~tg~~~~~~~---- 204 (360)
+..+.. ... ........+|+.|+++ ++|++... ....|+.++ +.+..++....
T Consensus 104 i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~----------------~p~~i~~~~g~~~~~~l~i~~~~~~~ 167 (255)
T 3qqz_A 104 VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEK----------------NPIEVYKVNGLLSSNELHISKDKALQ 167 (255)
T ss_dssp EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEES----------------SSEEEEEEESTTCSSCCEEEECHHHH
T ss_pred eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECc----------------CCceEEEEcccccCCceeeecchhhc
Confidence 333221 111 1222346899999887 79997432 223688887 22223333311
Q ss_pred ---CCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCC------CCCCceeEEcCCCCEEEEEec
Q 018144 205 ---GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENL------PGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 205 ---~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~------~g~pd~i~~d~~G~lwva~~~ 272 (360)
.+..+.+++++|..+.||+.+.....|..+|.+|....... +.... ..-|.||++|++|++||++..
T Consensus 168 ~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~-L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~ 243 (255)
T 3qqz_A 168 RQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMS-LTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP 243 (255)
T ss_dssp HTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEE-CSTTGGGCSSCCCSEEEEEECTTCCEEEEETT
T ss_pred cccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEE-cCCccCCcccccCCCCeeEECCCCCEEEEcCC
Confidence 24467899999998889999998999999998775222221 11111 114889999999999999654
No 91
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.12 E-value=6.1e-09 Score=94.81 Aligned_cols=159 Identities=14% Similarity=0.145 Sum_probs=105.7
Q ss_pred cccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEE-eCCC-------cCcceEEE---ec
Q 018144 149 RFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGF-------YFANGVAL---SR 216 (360)
Q Consensus 149 ~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~-~~~l-------~~pngia~---~~ 216 (360)
.+|.++..|+ +|.+|+++.. .++|.++|++++..+.+ ..++ ..+.|+.+ ++
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~-----------------~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~ 75 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLY-----------------KGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDN 75 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETT-----------------TTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSS
T ss_pred cCCcCccCcCCCCEEEEEecc-----------------CCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCC
Confidence 5789999975 7899998743 57999999986654443 2222 25789999 78
Q ss_pred CCCEEEE-EeC------------CCCEEEEEEecCCcCcceeeecc------C-------CCCCCceeEEcCCCCEEEEE
Q 018144 217 DEDYVVV-CES------------WKFRCRKYWLKGERKGKLETFAE------N-------LPGAPDNINLAPDGTFWIAI 270 (360)
Q Consensus 217 dg~~l~v-~~t------------~~~~i~~~~~~g~~~~~~~~~~~------~-------~~g~pd~i~~d~~G~lwva~ 270 (360)
+++ ||+ ++. +...|.+||+++...+......+ . ..+.++++++|++||+||+.
T Consensus 76 ~gr-L~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~ 154 (334)
T 2p9w_A 76 SKR-LFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAF 154 (334)
T ss_dssp CCE-EEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEE
T ss_pred CCc-EEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeC
Confidence 865 666 552 35789999988211111111111 1 22358899999999999976
Q ss_pred ecCchhHHHHhhcchhHHHHHHhCCccccccccCCCc-eEEEEECCCCcEEEEEe--CCCCCcccceeeEEEE-CC-EEE
Q 018144 271 IKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGG-AHLIHVAEDGTIIRNLV--DPTGQLMSFVTSGLQV-DN-HLY 345 (360)
Q Consensus 271 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~-~~v~~~~~~g~~~~~~~--~~~g~~~~~~t~~~~~-~g-~Ly 345 (360)
.. . +.|++++++|+....+. .+........++++.+ +| .|+
T Consensus 155 s~----------------------------------~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Li 200 (334)
T 2p9w_A 155 AL----------------------------------GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLI 200 (334)
T ss_dssp EE----------------------------------SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEE
T ss_pred CC----------------------------------CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEE
Confidence 55 2 57999999998555442 2222223446788887 45 555
Q ss_pred EEeCCCCeEEEEeCC
Q 018144 346 VISLTSNFIGKVQLS 360 (360)
Q Consensus 346 lgs~~~~~i~~~~l~ 360 (360)
+... +.+|.++++.
T Consensus 201 v~~~-~g~L~~fD~~ 214 (334)
T 2p9w_A 201 AFGG-PRALTAFDVS 214 (334)
T ss_dssp EESS-SSSEEEEECS
T ss_pred EEcC-CCeEEEEcCC
Confidence 5555 9999998863
No 92
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.11 E-value=2e-08 Score=88.63 Aligned_cols=184 Identities=10% Similarity=0.104 Sum_probs=114.3
Q ss_pred CCeEEEEeCCC---cEEEEc-CCC-e-EEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEE
Q 018144 116 DSHLIICDNAN---GLHKVS-EDG-V-ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQL 189 (360)
Q Consensus 116 ~g~L~v~~~~~---gl~~~~-~~g-~-~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l 189 (360)
+++||+++... .|.++| ++| + ..+. .+.. .+..+++++. ++||+.+.. .+.+
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~--l~~~--~FgeGit~~g-~~ly~ltw~-----------------~~~v 109 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIE--LGKR--YFGEGISDWK-DKIVGLTWK-----------------NGLG 109 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEE--CCTT--CCEEEEEEET-TEEEEEESS-----------------SSEE
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEe--cCCc--cceeEEEEeC-CEEEEEEee-----------------CCEE
Confidence 45555555332 355566 555 2 2221 1111 2345677763 589997532 5689
Q ss_pred EEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCc-CcceeeeccCCC-CCCceeEEcCCCCEE
Q 018144 190 LKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGER-KGKLETFAENLP-GAPDNINLAPDGTFW 267 (360)
Q Consensus 190 ~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~-~~~~~~~~~~~~-g~pd~i~~d~~G~lw 267 (360)
+.||++|.+....... .+.|..+++|++.||+++. .++|+.+|++..+ ....++-....+ ..++.+... +|.+|
T Consensus 110 ~v~D~~t~~~~~ti~~--~~eG~glt~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~ly 185 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNY--DGEGWGLTHNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIF 185 (262)
T ss_dssp EEEETTTCCEEEEEEC--SSCCCCEEECSSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEECccCcEEEEEEC--CCCceEEecCCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEE
Confidence 9999988876543322 2355566678888999984 6889999986432 222222111111 233445555 78999
Q ss_pred EEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCC--------cccceeeEE
Q 018144 268 IAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQ--------LMSFVTSGL 338 (360)
Q Consensus 268 va~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~--------~~~~~t~~~ 338 (360)
++.+. ...|.++|+ +|+++..+..+.-. ......+++
T Consensus 186 an~w~----------------------------------~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA 231 (262)
T 3nol_A 186 ANVWQ----------------------------------TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIA 231 (262)
T ss_dssp EEETT----------------------------------SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEE
T ss_pred EEEcc----------------------------------CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEE
Confidence 99876 358999997 68999988764211 112446777
Q ss_pred EE--CCEEEEEeCCCCeEEEEeC
Q 018144 339 QV--DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 339 ~~--~g~Lylgs~~~~~i~~~~l 359 (360)
.+ +++||+++..=+.+-+++|
T Consensus 232 ~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 232 WDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp EETTTTEEEEEETTCSEEEEEEE
T ss_pred EcCCCCEEEEECCCCCceEEEEE
Confidence 76 3899999999888887765
No 93
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.09 E-value=1.2e-08 Score=90.89 Aligned_cols=143 Identities=11% Similarity=0.043 Sum_probs=105.1
Q ss_pred CCCCCcceEEEcCCCCEEEEe-cCCeEEEEE--CCeee-E----------EEecCCeEEEEeCCCcEEEEc-CCC--eEE
Q 018144 76 GSVNHPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWV-N----------WKFIDSHLIICDNANGLHKVS-EDG--VEN 138 (360)
Q Consensus 76 ~~~~~Pe~i~~d~~G~l~v~~-~~G~I~~~~--~g~~~-~----------~~~~~g~L~v~~~~~gl~~~~-~~g--~~~ 138 (360)
+.-..+|+++.+ ++.||+++ .++.++.+| +.+.. . +...+++||+++..+.+..+| .+. ...
T Consensus 63 ~~~~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~ 141 (266)
T 2iwa_A 63 DDSYFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKK 141 (266)
T ss_dssp CTTCCEEEEEEE-TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEE
T ss_pred CCCcceEEEEEe-CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEE
Confidence 334677889988 56999999 688999999 44322 1 222356799998667788888 554 444
Q ss_pred EeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC--CC----------
Q 018144 139 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--GF---------- 206 (360)
Q Consensus 139 l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~--~l---------- 206 (360)
+.....+.+...+|.+.+. +|.+|+++.. .+.|.++|++++++..... ++
T Consensus 142 I~Vg~~~~p~~~~nele~~-dg~lyvn~~~-----------------~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~ 203 (266)
T 2iwa_A 142 HNVKYNGHRVIRLNELEYI-NGEVWANIWQ-----------------TDCIARISAKDGTLLGWILLPNLRKKLIDEGFR 203 (266)
T ss_dssp EECEETTEECCCEEEEEEE-TTEEEEEETT-----------------SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCT
T ss_pred EEECCCCcccccceeEEEE-CCEEEEecCC-----------------CCeEEEEECCCCcEEEEEECCCccccccccccc
Confidence 4333334455678898887 7899997532 4689999999998765432 22
Q ss_pred --cCcceEEEecCCCEEEEEeCCCCEEEEEEec
Q 018144 207 --YFANGVALSRDEDYVVVCESWKFRCRKYWLK 237 (360)
Q Consensus 207 --~~pngia~~~dg~~l~v~~t~~~~i~~~~~~ 237 (360)
..||||+++++++.+||+.....+|+.+++.
T Consensus 204 ~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 204 DIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred ccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 3679999999999999999988999999874
No 94
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.08 E-value=1.5e-08 Score=89.28 Aligned_cols=138 Identities=21% Similarity=0.212 Sum_probs=99.8
Q ss_pred CcceEEEcCCCCEEEEe-cCCeEEEEE--CCeee-E---------EEecCCeEEEEeCCCcEEEEc-CCC--eEEEeecc
Q 018144 80 HPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWV-N---------WKFIDSHLIICDNANGLHKVS-EDG--VENFLSYV 143 (360)
Q Consensus 80 ~Pe~i~~d~~G~l~v~~-~~G~I~~~~--~g~~~-~---------~~~~~g~L~v~~~~~gl~~~~-~~g--~~~l~~~~ 143 (360)
-.|+++.+ ++.||+.+ .++.++++| +.+.. . +...+++||+++..+.+..+| ++. ...+....
T Consensus 88 FgeGit~~-g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~ 166 (262)
T 3nol_A 88 FGEGISDW-KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTA 166 (262)
T ss_dssp CEEEEEEE-TTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEE
T ss_pred ceeEEEEe-CCEEEEEEeeCCEEEEEECccCcEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEecc
Confidence 34888887 56999999 688999999 44332 2 223467899998767788899 555 34443333
Q ss_pred CCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC--C-----------CcCcc
Q 018144 144 NGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--G-----------FYFAN 210 (360)
Q Consensus 144 ~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~--~-----------l~~pn 210 (360)
.+.++..+|.+... +|.||+.+.. .+.|.++|++||++....+ + ...+|
T Consensus 167 ~g~~~~~lNELe~~-~G~lyan~w~-----------------~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlN 228 (262)
T 3nol_A 167 HGEELPELNELEWV-DGEIFANVWQ-----------------TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLN 228 (262)
T ss_dssp TTEECCCEEEEEEE-TTEEEEEETT-----------------SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEE
T ss_pred CCccccccceeEEE-CCEEEEEEcc-----------------CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceE
Confidence 45566678888775 7999997532 4589999999999865432 1 23679
Q ss_pred eEEEecCCCEEEEEeCCCCEEEEEEe
Q 018144 211 GVALSRDEDYVVVCESWKFRCRKYWL 236 (360)
Q Consensus 211 gia~~~dg~~l~v~~t~~~~i~~~~~ 236 (360)
|||++++++.|||+.-.=.+++.+.+
T Consensus 229 GIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 229 GIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp EEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred EEEEcCCCCEEEEECCCCCceEEEEE
Confidence 99999999999999876567777664
No 95
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.07 E-value=1e-07 Score=86.59 Aligned_cols=163 Identities=11% Similarity=0.056 Sum_probs=99.8
Q ss_pred CCEEEEe-cCCeEEEEE-C--CeeeE------------EEe-cCC-eEEEEeCC-CcEEEEc-C--CC-eEEEeeccCCc
Q 018144 90 GVIYTAT-RDGWIKRLQ-D--GTWVN------------WKF-IDS-HLIICDNA-NGLHKVS-E--DG-VENFLSYVNGS 146 (360)
Q Consensus 90 G~l~v~~-~~G~I~~~~-~--g~~~~------------~~~-~~g-~L~v~~~~-~gl~~~~-~--~g-~~~l~~~~~~~ 146 (360)
..+|+++ .++.|..++ + |+.+. +.. ++| .||+++.. ..+..++ . ++ .+.+......
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~- 83 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP- 83 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-
Confidence 4566664 567776666 3 43221 111 234 48888876 4555555 3 55 5544322111
Q ss_pred cccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCC---eEEEEeCCCcCcceEEEecCCCEEE
Q 018144 147 KLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN---ITTLVADGFYFANGVALSRDEDYVV 222 (360)
Q Consensus 147 ~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg---~~~~~~~~l~~pngia~~~dg~~l~ 222 (360)
..+.+++++++|+ +|+++.. .+.|..+|.+++ +..........++++++++||+.+|
T Consensus 84 --~~~~~~~~s~dg~~l~~~~~~-----------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 144 (343)
T 1ri6_A 84 --GSLTHISTDHQGQFVFVGSYN-----------------AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLW 144 (343)
T ss_dssp --SCCSEEEECTTSSEEEEEETT-----------------TTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEE
T ss_pred --CCCcEEEEcCCCCEEEEEecC-----------------CCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEE
Confidence 2588999999996 7786432 356777776323 2333334556789999999999999
Q ss_pred EEeCCCCEEEEEEecC-CcCccee--eeccCCCCCCceeEEcCCCC-EEEEEec
Q 018144 223 VCESWKFRCRKYWLKG-ERKGKLE--TFAENLPGAPDNINLAPDGT-FWIAIIK 272 (360)
Q Consensus 223 v~~t~~~~i~~~~~~g-~~~~~~~--~~~~~~~g~pd~i~~d~~G~-lwva~~~ 272 (360)
+++...+.|..|+++. .+..... .+.......|.+++++++|+ +|++...
T Consensus 145 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~ 198 (343)
T 1ri6_A 145 VPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL 198 (343)
T ss_dssp EEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT
T ss_pred EecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC
Confidence 9986678999999864 2222111 22212223578899999997 7777643
No 96
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.05 E-value=4.1e-08 Score=86.59 Aligned_cols=189 Identities=14% Similarity=0.128 Sum_probs=119.1
Q ss_pred eEEEecCCeEEEEeCCC-cEEEEc-CCC--eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCC
Q 018144 110 VNWKFIDSHLIICDNAN-GLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKP 185 (360)
Q Consensus 110 ~~~~~~~g~L~v~~~~~-gl~~~~-~~g--~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~ 185 (360)
+.+...+++||+++... .|.++| ++| ...+ .+.. .+..+++++. ++||+.+..
T Consensus 58 qGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~---l~~~--~FgeGit~~g-~~Ly~ltw~----------------- 114 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME---RLGN--IFAEGLASDG-ERLYQLTWT----------------- 114 (268)
T ss_dssp EEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE---ECTT--CCEEEEEECS-SCEEEEESS-----------------
T ss_pred ceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE---CCCC--cceeEEEEeC-CEEEEEEcc-----------------
Confidence 34444567777777654 355566 566 3333 2221 2345677764 589997532
Q ss_pred ccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcC-cceeeeccCCC-CCCceeEEcCC
Q 018144 186 HGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERK-GKLETFAENLP-GAPDNINLAPD 263 (360)
Q Consensus 186 ~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~-~~~~~~~~~~~-g~pd~i~~d~~ 263 (360)
.+.++.||++|.+....... .+.|..+++|++.||+++ +.++|..+|++..+. .+.++-....+ ..++.+... +
T Consensus 115 ~~~v~V~D~~Tl~~~~ti~~--~~eGwGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-d 190 (268)
T 3nok_A 115 EGLLFTWSGMPPQRERTTRY--SGEGWGLCYWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-N 190 (268)
T ss_dssp SCEEEEEETTTTEEEEEEEC--SSCCCCEEEETTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CCEEEEEECCcCcEEEEEeC--CCceeEEecCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-C
Confidence 56899999998877543332 244555557788999998 478999999764322 22222111111 123445555 7
Q ss_pred CCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCC---------CCcccc
Q 018144 264 GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPT---------GQLMSF 333 (360)
Q Consensus 264 G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~---------g~~~~~ 333 (360)
|.||++.+. ...|.++|+ +|+++..+.... ....+.
T Consensus 191 G~lyanvw~----------------------------------s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~v 236 (268)
T 3nok_A 191 GVIYANIWH----------------------------------SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAV 236 (268)
T ss_dssp TEEEEEETT----------------------------------CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCC
T ss_pred CEEEEEECC----------------------------------CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCc
Confidence 899998876 358999998 689988886421 001234
Q ss_pred eeeEEEE--CCEEEEEeCCCCeEEEEeC
Q 018144 334 VTSGLQV--DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 334 ~t~~~~~--~g~Lylgs~~~~~i~~~~l 359 (360)
..+++.+ +++||+++..=+.+-+++|
T Consensus 237 lNGIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 237 LNGIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp EEEEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred eEEEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 5667776 3889999999898888775
No 97
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.03 E-value=2.3e-08 Score=88.27 Aligned_cols=138 Identities=17% Similarity=0.211 Sum_probs=99.5
Q ss_pred CcceEEEcCCCCEEEEe-cCCeEEEEE--CCeee-E---------EEecCCeEEEEeCCCcEEEEc-CCC--eEEEeecc
Q 018144 80 HPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWV-N---------WKFIDSHLIICDNANGLHKVS-EDG--VENFLSYV 143 (360)
Q Consensus 80 ~Pe~i~~d~~G~l~v~~-~~G~I~~~~--~g~~~-~---------~~~~~g~L~v~~~~~gl~~~~-~~g--~~~l~~~~ 143 (360)
-.|+++.+ ++.||+.+ .++.++.+| +.+.. . +...+++||+++..+.+..+| ++. ...+....
T Consensus 97 FgeGit~~-g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~ 175 (268)
T 3nok_A 97 FAEGLASD-GERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL 175 (268)
T ss_dssp CEEEEEEC-SSCEEEEESSSCEEEEEETTTTEEEEEEECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred ceeEEEEe-CCEEEEEEccCCEEEEEECCcCcEEEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC
Confidence 44888887 56999999 688999999 55432 1 223467899999767788899 555 44443333
Q ss_pred CCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC--------------CCcCc
Q 018144 144 NGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--------------GFYFA 209 (360)
Q Consensus 144 ~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~--------------~l~~p 209 (360)
.+.++..+|.+... +|.||+.+.. .+.|.++|+++|++....+ ....+
T Consensus 176 ~g~~v~~lNeLe~~-dG~lyanvw~-----------------s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vl 237 (268)
T 3nok_A 176 RGQPVELINELECA-NGVIYANIWH-----------------SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVL 237 (268)
T ss_dssp TTEECCCEEEEEEE-TTEEEEEETT-----------------CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCE
T ss_pred CCcccccccccEEe-CCEEEEEECC-----------------CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCce
Confidence 55566678888776 8899997532 4589999999998865332 11368
Q ss_pred ceEEEecCCCEEEEEeCCCCEEEEEEe
Q 018144 210 NGVALSRDEDYVVVCESWKFRCRKYWL 236 (360)
Q Consensus 210 ngia~~~dg~~l~v~~t~~~~i~~~~~ 236 (360)
||||++++++.|||+.-.=.+++.+.+
T Consensus 238 NGIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 238 NGIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp EEEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred EEEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 999999999999999765556766654
No 98
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.03 E-value=4.7e-08 Score=85.41 Aligned_cols=139 Identities=19% Similarity=0.098 Sum_probs=101.4
Q ss_pred CCcceEEEcCCCCEEEEe-cCCeEEEEE--CCeee----------EEEecCCeEEEEeCCCcEEEEc-CCC--eEEEeec
Q 018144 79 NHPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWV----------NWKFIDSHLIICDNANGLHKVS-EDG--VENFLSY 142 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v~~-~~G~I~~~~--~g~~~----------~~~~~~g~L~v~~~~~gl~~~~-~~g--~~~l~~~ 142 (360)
...|+++.+ ++.||+.+ .++.++.+| +.+.. .+...+++||+++....|..+| ++. ...+...
T Consensus 65 ~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~ 143 (243)
T 3mbr_X 65 YFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVT 143 (243)
T ss_dssp CCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred cceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEc
Confidence 355888887 57899999 788999999 44432 1234467899999777899999 555 4444333
Q ss_pred cCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC--------------CCcC
Q 018144 143 VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--------------GFYF 208 (360)
Q Consensus 143 ~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~--------------~l~~ 208 (360)
..+.++..+|.+... +|+||+.+.. ...|.++|+++|++....+ ....
T Consensus 144 ~~g~~~~~lNeLe~~-~G~lyanvw~-----------------s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~v 205 (243)
T 3mbr_X 144 AGGRPLDNLNELEWV-NGELLANVWL-----------------TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDV 205 (243)
T ss_dssp ETTEECCCEEEEEEE-TTEEEEEETT-----------------TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSC
T ss_pred cCCcccccceeeEEe-CCEEEEEECC-----------------CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCc
Confidence 455566677888765 7999986532 4589999999998865322 1236
Q ss_pred cceEEEecCCCEEEEEeCCCCEEEEEEe
Q 018144 209 ANGVALSRDEDYVVVCESWKFRCRKYWL 236 (360)
Q Consensus 209 pngia~~~dg~~l~v~~t~~~~i~~~~~ 236 (360)
+||||++++++.|||+.-.=.+++.+.+
T Consensus 206 lNGIA~d~~~~~lfVTGK~wp~~~~v~~ 233 (243)
T 3mbr_X 206 LNGIAFDAEHDRLFVTGKRWPMLYEIRL 233 (243)
T ss_dssp EEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred eEEEEEcCCCCEEEEECCCCCcEEEEEE
Confidence 7999999999999999876567777765
No 99
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.02 E-value=4.6e-09 Score=101.15 Aligned_cols=180 Identities=15% Similarity=0.163 Sum_probs=107.3
Q ss_pred ccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe---CC------CcCcceEEEecC-
Q 018144 148 LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA---DG------FYFANGVALSRD- 217 (360)
Q Consensus 148 ~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~---~~------l~~pngia~~~d- 217 (360)
+..|.+|+++++|+|||++.. .++|+++++.+++.+.+. .. ...+.||+++||
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~-----------------gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf 88 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERA-----------------TGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDF 88 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETT-----------------TCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTT
T ss_pred CCCceEEEEcCCCcEEEEEcC-----------------CCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCc
Confidence 356889999999999998642 347999987667665432 22 233459999996
Q ss_pred --CCEEEEEeCC------------CCEEEEEEecCC--cCcceeeeccCCC----CCCceeEEcCCCCEEEEEecCchhH
Q 018144 218 --EDYVVVCESW------------KFRCRKYWLKGE--RKGKLETFAENLP----GAPDNINLAPDGTFWIAIIKLDARR 277 (360)
Q Consensus 218 --g~~l~v~~t~------------~~~i~~~~~~g~--~~~~~~~~~~~~~----g~pd~i~~d~~G~lwva~~~~~~~~ 277 (360)
+..||++.+. ..+|.|++.+.. .....+++.+..+ -.+.+|++++||+|||+.....+..
T Consensus 89 ~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~ 168 (454)
T 1cru_A 89 KNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQ 168 (454)
T ss_dssp TTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTS
T ss_pred CcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCC
Confidence 6689999864 358999987642 2223333332222 1478899999999999976532110
Q ss_pred HHHhhcchhHHHHHHhCCccc--cccccCCCceEEEEECCCCc-----------EEEEEeCCCCCcccceeeEEEE-CCE
Q 018144 278 MKILNSSKLIKHVLAAYPKLF--SQFITLGGGAHLIHVAEDGT-----------IIRNLVDPTGQLMSFVTSGLQV-DNH 343 (360)
Q Consensus 278 ~~~~~~~~~~r~~~~~~~~~~--~~~~~~~~~~~v~~~~~~g~-----------~~~~~~~~~g~~~~~~t~~~~~-~g~ 343 (360)
.+.. ..|. + -.++|... ..-......+.|+|++++|+ ..+.+.. | +..+.++..+ +|+
T Consensus 169 ~~~~-~~~~-~--~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~--G--~RNp~gla~dp~G~ 240 (454)
T 1cru_A 169 LAYL-FLPN-Q--AQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTL--G--HRNPQGLAFTPNGK 240 (454)
T ss_dssp GGGT-TSCC-C--TTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEB--C--CSEEEEEEECTTSC
T ss_pred cccc-cccc-c--cccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEE--C--CCCcceEEECCCCC
Confidence 0000 0000 0 00000000 00000123589999999997 2344443 3 2356677777 489
Q ss_pred EEEEeCCCC
Q 018144 344 LYVISLTSN 352 (360)
Q Consensus 344 Lylgs~~~~ 352 (360)
||++....+
T Consensus 241 L~~~d~g~~ 249 (454)
T 1cru_A 241 LLQSEQGPN 249 (454)
T ss_dssp EEEEEECSS
T ss_pred EEEEecCCC
Confidence 999987543
No 100
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.01 E-value=2.3e-07 Score=87.65 Aligned_cols=237 Identities=11% Similarity=0.056 Sum_probs=148.8
Q ss_pred CcceEEEcCCCCEEEEe-cCCeEEEEE--CCeee-EE----------E--ecCCeEEEEeCC-CcEEEEc-CCC-eEEEe
Q 018144 80 HPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWV-NW----------K--FIDSHLIICDNA-NGLHKVS-EDG-VENFL 140 (360)
Q Consensus 80 ~Pe~i~~d~~G~l~v~~-~~G~I~~~~--~g~~~-~~----------~--~~~g~L~v~~~~-~gl~~~~-~~g-~~~l~ 140 (360)
...++++.++|.+|++. .+|.|..++ +++.. .+ . ..+..+|++... +.+..++ .++ .....
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~ 250 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKT 250 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEe
Confidence 44568888889888877 789999998 44321 11 1 123457777744 4567777 566 32221
Q ss_pred eccCCccccccccEEEcCCC-cEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCC
Q 018144 141 SYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDED 219 (360)
Q Consensus 141 ~~~~~~~~~~~n~l~~d~dG-~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~ 219 (360)
.. . ..+.+++++++| .+|++...... . ....+.|..+|..+++..........+.+++++++++
T Consensus 251 ~~--~---~~~~~~~~~~~g~~l~~~~~~~~~---------~-~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~ 315 (433)
T 3bws_A 251 DK--I---GLPRGLLLSKDGKELYIAQFSASN---------Q-ESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTEN 315 (433)
T ss_dssp CC--C---SEEEEEEECTTSSEEEEEEEESCT---------T-CSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTT
T ss_pred cC--C---CCceEEEEcCCCCEEEEEECCCCc---------c-ccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCC
Confidence 11 1 247889999999 46665422100 0 0135789999998887655443334678999999999
Q ss_pred EEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchhHHHHHHhCCccc
Q 018144 220 YVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLF 298 (360)
Q Consensus 220 ~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 298 (360)
.+|++....+.|..|+++..+. ...+. ....+..++++++|+ +|++....... ..
T Consensus 316 ~l~~~~~~~~~v~v~d~~~~~~--~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~--------------------~~ 371 (433)
T 3bws_A 316 KIYVSDMCCSKIEVYDLKEKKV--QKSIP--VFDKPNTIALSPDGKYLYVSCRGPNHP--------------------TE 371 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEE--EEEEE--CSSSEEEEEECTTSSEEEEEECCCCCT--------------------TT
T ss_pred EEEEEecCCCEEEEEECCCCcE--EEEec--CCCCCCeEEEcCCCCEEEEEecCCCcc--------------------cc
Confidence 8999988889999999864321 12221 233578899999996 77776541100 00
Q ss_pred cccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEE--CCEEEEEeCCCCeEEEEeCC
Q 018144 299 SQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQLS 360 (360)
Q Consensus 299 ~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~--~g~Lylgs~~~~~i~~~~l~ 360 (360)
..+......+.|..+|. +++.+..+... ..+..+... +..|++++...+.|.+++++
T Consensus 372 ~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 372 GYLKKGLVLGKVYVIDTTTDTVKEFWEAG-----NQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp CTTSCCSSCCEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred ccccccccceEEEEEECCCCcEEEEecCC-----CCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 00001122358888986 67777777642 246666665 35788888778899888764
No 101
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.00 E-value=3e-07 Score=86.80 Aligned_cols=209 Identities=13% Similarity=0.125 Sum_probs=137.1
Q ss_pred CCcceEEEcCCCCEEEEe-cCCeEEEEE--CCeeeE----------------EE-ecCCeEEEEeCC-CcEEEEc-CCC-
Q 018144 79 NHPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVN----------------WK-FIDSHLIICDNA-NGLHKVS-EDG- 135 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v~~-~~G~I~~~~--~g~~~~----------------~~-~~~g~L~v~~~~-~gl~~~~-~~g- 135 (360)
..|.++++++++.+|++. .++.|..++ +++... +. ..++++|++... ..+..++ .++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence 457789999988898887 567799998 454322 11 236778877655 4566677 555
Q ss_pred -eEEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEE
Q 018144 136 -VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVA 213 (360)
Q Consensus 136 -~~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia 213 (360)
...+. . .+ ..+..++++++|. +|++.. ..+.|..+|..+++..........+.+++
T Consensus 203 ~~~~~~-~-~~---~~~~~~~~~~~~~~l~~~~~-----------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 260 (433)
T 3bws_A 203 YKATVD-L-TG---KWSKILLYDPIRDLVYCSNW-----------------ISEDISVIDRKTKLEIRKTDKIGLPRGLL 260 (433)
T ss_dssp EEEEEE-C-SS---SSEEEEEEETTTTEEEEEET-----------------TTTEEEEEETTTTEEEEECCCCSEEEEEE
T ss_pred EEEEEc-C-CC---CCeeEEEEcCCCCEEEEEec-----------------CCCcEEEEECCCCcEEEEecCCCCceEEE
Confidence 33332 1 11 3578899999986 666542 25689999998887765555555689999
Q ss_pred EecCCCEEEEEeC-------CCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcch
Q 018144 214 LSRDEDYVVVCES-------WKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSK 285 (360)
Q Consensus 214 ~~~dg~~l~v~~t-------~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~ 285 (360)
++++|+.++++.. ..+.|..+++...+. ...+ ..++.+.+++++++|+ +|++...
T Consensus 261 ~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~--~~~~--~~~~~~~~~~~~~~g~~l~~~~~~------------- 323 (433)
T 3bws_A 261 LSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL--IDTI--GPPGNKRHIVSGNTENKIYVSDMC------------- 323 (433)
T ss_dssp ECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE--EEEE--EEEECEEEEEECSSTTEEEEEETT-------------
T ss_pred EcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE--Eeec--cCCCCcceEEECCCCCEEEEEecC-------------
Confidence 9999998888874 345788999764321 1111 1123577899999995 7777554
Q ss_pred hHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEeCCCCCcccceeeEEEE--CCEEEEEeCCCC
Q 018144 286 LIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSN 352 (360)
Q Consensus 286 ~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~g~~~~~~t~~~~~--~g~Lylgs~~~~ 352 (360)
.+.|..++.+ ++.+..+... ..+..+... +..||+++...+
T Consensus 324 ---------------------~~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~~ 367 (433)
T 3bws_A 324 ---------------------CSKIEVYDLKEKKVQKSIPVF-----DKPNTIALSPDGKYLYVSCRGPN 367 (433)
T ss_dssp ---------------------TTEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSSEEEEEECCCC
T ss_pred ---------------------CCEEEEEECCCCcEEEEecCC-----CCCCeEEEcCCCCEEEEEecCCC
Confidence 2577777764 6666666532 235556555 346888876644
No 102
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.00 E-value=2.6e-07 Score=91.01 Aligned_cols=219 Identities=9% Similarity=-0.030 Sum_probs=140.4
Q ss_pred EEcCCCCEEEEe-cCCeEEEEE--CCeee----------EEEe--cCCeEEEEeCCCcEEEEcC---CCeEEEeeccCCc
Q 018144 85 SMDKNGVIYTAT-RDGWIKRLQ--DGTWV----------NWKF--IDSHLIICDNANGLHKVSE---DGVENFLSYVNGS 146 (360)
Q Consensus 85 ~~d~~G~l~v~~-~~G~I~~~~--~g~~~----------~~~~--~~g~L~v~~~~~gl~~~~~---~g~~~l~~~~~~~ 146 (360)
+++++|.+|++. .++.|..+| +++.. .+.. .+..||+++.++.+..+|- ++ +.+.....+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~-~~~~~i~~g- 221 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEP-TKVAEIKIG- 221 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSC-EEEEEEECC-
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCC-cEEEEEecC-
Confidence 477888999888 678899898 55432 1111 2446999988777777773 33 222211122
Q ss_pred cccccccEEEcC----CCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC------------CcCc
Q 018144 147 KLRFANDVVEAS----DGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG------------FYFA 209 (360)
Q Consensus 147 ~~~~~n~l~~d~----dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~------------l~~p 209 (360)
..|.++++++ ||+ +|+++. ..+.|..+|..+++....... ...+
T Consensus 222 --~~p~~va~sp~~~~dg~~l~v~~~-----------------~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v 282 (543)
T 1nir_A 222 --IEARSVESSKFKGYEDRYTIAGAY-----------------WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRV 282 (543)
T ss_dssp --SEEEEEEECCSTTCTTTEEEEEEE-----------------ESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCE
T ss_pred --CCcceEEeCCCcCCCCCEEEEEEc-----------------cCCeEEEEeccccccceeecccCcccCccccccCCce
Confidence 3578999999 885 788642 135788889888776543221 1245
Q ss_pred ceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchhHH
Q 018144 210 NGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIK 288 (360)
Q Consensus 210 ngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r 288 (360)
.++++++++..+|++....+.|..++....+.-....+. ....|.++.++++|+ ++++...
T Consensus 283 ~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~--~~~~~~~~~~spdg~~l~va~~~---------------- 344 (543)
T 1nir_A 283 AAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG--AAPFLHDGGWDSSHRYFMTAANN---------------- 344 (543)
T ss_dssp EEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE--CCSSCCCEEECTTSCEEEEEEGG----------------
T ss_pred EEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec--cCcCccCceECCCCCEEEEEecC----------------
Confidence 689999999999999998899999998643221111221 234688999999998 5666654
Q ss_pred HHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEe-CCCCeEEEEeCC
Q 018144 289 HVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVIS-LTSNFIGKVQLS 360 (360)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs-~~~~~i~~~~l~ 360 (360)
.+.|..+|. +|+++..+.............+..- +|.+|+++ ...+.|.+++++
T Consensus 345 ------------------~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~ 401 (543)
T 1nir_A 345 ------------------SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTD 401 (543)
T ss_dssp ------------------GTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECC
T ss_pred ------------------CCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeC
Confidence 246777885 6787777764221100011222222 48899886 467889888753
No 103
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.98 E-value=4.1e-07 Score=84.64 Aligned_cols=178 Identities=16% Similarity=0.186 Sum_probs=115.6
Q ss_pred CeEEEEeCC-CcEEEEc-CCC-eEEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEE
Q 018144 117 SHLIICDNA-NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKY 192 (360)
Q Consensus 117 g~L~v~~~~-~gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~ 192 (360)
..||++... +.+..++ .++ ....... . ..++.++++++|+ ||++.. ..+.|..+
T Consensus 44 ~~l~~~~~~d~~i~v~d~~~~~~~~~~~~-~----~~v~~~~~spdg~~l~~~~~-----------------~~~~v~v~ 101 (391)
T 1l0q_A 44 TKVYVANAHSNDVSIIDTATNNVIATVPA-G----SSPQGVAVSPDGKQVYVTNM-----------------ASSTLSVI 101 (391)
T ss_dssp SEEEEEEGGGTEEEEEETTTTEEEEEEEC-S----SSEEEEEECTTSSEEEEEET-----------------TTTEEEEE
T ss_pred CEEEEECCCCCeEEEEECCCCeEEEEEEC-C----CCccceEECCCCCEEEEEEC-----------------CCCEEEEE
Confidence 347776643 5566777 666 3222111 1 1578899999996 777643 24689999
Q ss_pred cCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC-EEEEEe
Q 018144 193 DPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAII 271 (360)
Q Consensus 193 d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~ 271 (360)
|..+++..........+.++++++|++.+|++....+.|..+++...+. ...+. ....|..++++++|+ +|++..
T Consensus 102 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~--~~~~~~~~~~~~dg~~l~~~~~ 177 (391)
T 1l0q_A 102 DTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV--INTVS--VGRSPKGIAVTPDGTKVYVANF 177 (391)
T ss_dssp ETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--EEEEE--CCSSEEEEEECTTSSEEEEEET
T ss_pred ECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE--EEEEe--cCCCcceEEECCCCCEEEEEeC
Confidence 9998887665555567899999999999989988888999999754321 12221 223478899999995 667654
Q ss_pred cCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEE--CCEEEEEe
Q 018144 272 KLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVIS 348 (360)
Q Consensus 272 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~--~g~Lylgs 348 (360)
. .+.|..+|. .++....+.... .+..+... +..||+++
T Consensus 178 ~----------------------------------~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~g~~l~~~~ 218 (391)
T 1l0q_A 178 D----------------------------------SMSISVIDTVTNSVIDTVKVEA-----APSGIAVNPEGTKAYVTN 218 (391)
T ss_dssp T----------------------------------TTEEEEEETTTTEEEEEEECSS-----EEEEEEECTTSSEEEEEE
T ss_pred C----------------------------------CCEEEEEECCCCeEEEEEecCC-----CccceEECCCCCEEEEEe
Confidence 4 246777775 455555554321 34455554 35677777
Q ss_pred C--CCCeEEEEeC
Q 018144 349 L--TSNFIGKVQL 359 (360)
Q Consensus 349 ~--~~~~i~~~~l 359 (360)
. ....|.++++
T Consensus 219 ~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 219 VDKYFNTVSMIDT 231 (391)
T ss_dssp ECSSCCEEEEEET
T ss_pred cCcCCCcEEEEEC
Confidence 5 5666766654
No 104
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.98 E-value=9.2e-09 Score=95.82 Aligned_cols=161 Identities=15% Similarity=0.109 Sum_probs=103.9
Q ss_pred ccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE-E-------eCCCcCcceEEEecC-
Q 018144 148 LRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-V-------ADGFYFANGVALSRD- 217 (360)
Q Consensus 148 ~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~-~-------~~~l~~pngia~~~d- 217 (360)
+..|.+|+++++|+ +||++. .|+|++++++ ++... + ..+...++||+++||
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~------------------~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf 77 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLR------------------GGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDF 77 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEET------------------TTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTH
T ss_pred CCCcEEEEEcCCCCEEEEEeC------------------CceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCC
Confidence 45689999999999 999853 3789999875 54321 1 123346789999996
Q ss_pred --CCEEEEEeCC-------CCEEEEEEecCC--cCcceeeeccCCC------CCCceeEEcCCCCEEEEEecCchhHHHH
Q 018144 218 --EDYVVVCESW-------KFRCRKYWLKGE--RKGKLETFAENLP------GAPDNINLAPDGTFWIAIIKLDARRMKI 280 (360)
Q Consensus 218 --g~~l~v~~t~-------~~~i~~~~~~g~--~~~~~~~~~~~~~------g~pd~i~~d~~G~lwva~~~~~~~~~~~ 280 (360)
+..+|++.+. ..+|.|++.++. .....+++.+..+ -.+.+|++++||+|||+.....+..
T Consensus 78 ~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~--- 154 (353)
T 2g8s_A 78 AQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRP--- 154 (353)
T ss_dssp HHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGG---
T ss_pred CCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCC---
Confidence 6679999764 458999988643 2233343332222 1377899999999999986532210
Q ss_pred hhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcE-------------EEEEeCCCCCcccceeeEEEE--CCEEE
Q 018144 281 LNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTI-------------IRNLVDPTGQLMSFVTSGLQV--DNHLY 345 (360)
Q Consensus 281 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~-------------~~~~~~~~g~~~~~~t~~~~~--~g~Ly 345 (360)
. .+ ......+.|+|++++|++ .+.+.. | +..+..+..+ +|+||
T Consensus 155 ~----------------~q--~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~--G--~rnp~gl~~d~~~g~l~ 212 (353)
T 2g8s_A 155 T----------------AQ--DLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSY--G--IRNPQGMAMNPWSNALW 212 (353)
T ss_dssp G----------------GG--CTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEE--C--CSEEEEEEEETTTTEEE
T ss_pred c----------------cC--CCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEE--c--CcCccceEEECCCCCEE
Confidence 0 00 001224789999999862 222221 2 2346667776 48999
Q ss_pred EEeCCCC
Q 018144 346 VISLTSN 352 (360)
Q Consensus 346 lgs~~~~ 352 (360)
++....+
T Consensus 213 ~~d~g~~ 219 (353)
T 2g8s_A 213 LNEHGPR 219 (353)
T ss_dssp EEEECSB
T ss_pred EEecCCC
Confidence 9987643
No 105
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.97 E-value=1.8e-07 Score=84.77 Aligned_cols=210 Identities=14% Similarity=0.012 Sum_probs=131.9
Q ss_pred CcceEEEcCCC-CEEEEe-cCCeEEEEE--CCeeeE-EE----------------ecCC-eEEEEe------------CC
Q 018144 80 HPEDASMDKNG-VIYTAT-RDGWIKRLQ--DGTWVN-WK----------------FIDS-HLIICD------------NA 125 (360)
Q Consensus 80 ~Pe~i~~d~~G-~l~v~~-~~G~I~~~~--~g~~~~-~~----------------~~~g-~L~v~~------------~~ 125 (360)
.|.+++++++| .+|++. .++.|+.++ +++... +. .++| .||+++ ..
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 59999999988 578877 578899998 554321 11 1133 688885 34
Q ss_pred CcEEEEc-CCC-eEEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEE
Q 018144 126 NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV 202 (360)
Q Consensus 126 ~gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~ 202 (360)
..+..++ .++ ....... + ..+.+++++++|+ ||++ .+.|+.+|..+++....
T Consensus 115 ~~i~v~d~~~~~~~~~~~~--~---~~~~~~~~s~dg~~l~~~--------------------~~~i~~~d~~~~~~~~~ 169 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA--P---RQITMLAWARDGSKLYGL--------------------GRDLHVMDPEAGTLVED 169 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC--C---SSCCCEEECTTSSCEEEE--------------------SSSEEEEETTTTEEEEE
T ss_pred ceEEEEECCCCcEEEEEeC--C---CCcceeEECCCCCEEEEe--------------------CCeEEEEECCCCcEeee
Confidence 6688888 555 3222111 1 2478899999996 8885 24688999988877554
Q ss_pred eCCCcCcceEEEecCCCEEEEEeCCCC-----------------------EEEEEEecCCcCcceeeeccCCCCCCceeE
Q 018144 203 ADGFYFANGVALSRDEDYVVVCESWKF-----------------------RCRKYWLKGERKGKLETFAENLPGAPDNIN 259 (360)
Q Consensus 203 ~~~l~~pngia~~~dg~~l~v~~t~~~-----------------------~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~ 259 (360)
......+..+++++|++.+|++....+ .|..++.+..+..... +. .....|.+++
T Consensus 170 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~-~~~~~~~~~~ 247 (337)
T 1pby_B 170 KPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMRE-VR-IMDVFYFSTA 247 (337)
T ss_dssp ECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEE-EE-ECSSCEEEEE
T ss_pred eeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEee-cC-CCCCceeeEE
Confidence 433232345578899887777665444 3567776543322111 11 1223577899
Q ss_pred EcCCCC-EEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeE
Q 018144 260 LAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSG 337 (360)
Q Consensus 260 ~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~ 337 (360)
++++|+ +|++ . +.|..+|. +++.+..+.... .+.++
T Consensus 248 ~s~dg~~l~~~--~-----------------------------------~~v~~~d~~~~~~~~~~~~~~-----~~~~~ 285 (337)
T 1pby_B 248 VNPAKTRAFGA--Y-----------------------------------NVLESFDLEKNASIKRVPLPH-----SYYSV 285 (337)
T ss_dssp ECTTSSEEEEE--E-----------------------------------SEEEEEETTTTEEEEEEECSS-----CCCEE
T ss_pred ECCCCCEEEEe--C-----------------------------------CeEEEEECCCCcCcceecCCC-----ceeeE
Confidence 999996 6666 2 26788886 466666665432 24455
Q ss_pred EEE--CCEEEEEeCCCCeEEEEeC
Q 018144 338 LQV--DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 338 ~~~--~g~Lylgs~~~~~i~~~~l 359 (360)
... +.+||+++. .+.|.++++
T Consensus 286 ~~s~dg~~l~~~~~-~~~i~v~d~ 308 (337)
T 1pby_B 286 NVSTDGSTVWLGGA-LGDLAAYDA 308 (337)
T ss_dssp EECTTSCEEEEESB-SSEEEEEET
T ss_pred EECCCCCEEEEEcC-CCcEEEEEC
Confidence 554 356888744 677877765
No 106
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.95 E-value=3.1e-07 Score=84.81 Aligned_cols=174 Identities=16% Similarity=0.150 Sum_probs=107.1
Q ss_pred CCcceEEEcCCCCEEEEe-cCCeEEEEE---CCee------------------------eEEE-ecCC-eEEEEeCCC-c
Q 018144 79 NHPEDASMDKNGVIYTAT-RDGWIKRLQ---DGTW------------------------VNWK-FIDS-HLIICDNAN-G 127 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v~~-~~G~I~~~~---~g~~------------------------~~~~-~~~g-~L~v~~~~~-g 127 (360)
..|..+++ ....||+++ .+|.|..++ ++.. ..+. .++| .||+++... .
T Consensus 100 ~~p~~~~~-dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 178 (361)
T 3scy_A 100 ADPCYLTT-NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ 178 (361)
T ss_dssp SCEEEEEE-CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CCcEEEEE-CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE
Confidence 57888988 344688887 577787777 3321 1122 2345 488888653 4
Q ss_pred EEEEc-C--CC------eEEE--eeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCC
Q 018144 128 LHKVS-E--DG------VENF--LSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS 195 (360)
Q Consensus 128 l~~~~-~--~g------~~~l--~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 195 (360)
+..++ . ++ +... ...........|+++++++||+ +|+++.. .+.|..||.+
T Consensus 179 v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-----------------~~~v~v~~~~ 241 (361)
T 3scy_A 179 IHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI-----------------GGTVIAFRYA 241 (361)
T ss_dssp EEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----------------TCEEEEEEEE
T ss_pred EEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC-----------------CCeEEEEEec
Confidence 44444 2 22 1111 0000011123578899999996 8887532 4567777776
Q ss_pred CCeEEEEe------CCCcCcceEEEecCCCEEEEEeCC-CCEEEEEEecC--CcCcceeeeccCCCCCCceeEEcCCCC-
Q 018144 196 SNITTLVA------DGFYFANGVALSRDEDYVVVCESW-KFRCRKYWLKG--ERKGKLETFAENLPGAPDNINLAPDGT- 265 (360)
Q Consensus 196 tg~~~~~~------~~l~~pngia~~~dg~~l~v~~t~-~~~i~~~~~~g--~~~~~~~~~~~~~~g~pd~i~~d~~G~- 265 (360)
+++++.+. .....|.+++++|||++||++... .+.|..|+++. .+......+. . ...|.+++++++|+
T Consensus 242 ~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~-~-g~~~~~~~~spdg~~ 319 (361)
T 3scy_A 242 DGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL-T-GIHPRNFIITPNGKY 319 (361)
T ss_dssp TTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE-C-SSCCCEEEECTTSCE
T ss_pred CCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec-C-CCCCceEEECCCCCE
Confidence 67664432 123457799999999999999987 78898888852 2221222222 1 34689999999997
Q ss_pred EEEEEec
Q 018144 266 FWIAIIK 272 (360)
Q Consensus 266 lwva~~~ 272 (360)
||++...
T Consensus 320 l~~~~~~ 326 (361)
T 3scy_A 320 LLVACRD 326 (361)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 7777643
No 107
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.92 E-value=4.3e-07 Score=84.60 Aligned_cols=147 Identities=12% Similarity=0.022 Sum_probs=104.1
Q ss_pred cccccEEEc-C-------CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCC--------------
Q 018144 149 RFANDVVEA-S-------DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-------------- 206 (360)
Q Consensus 149 ~~~n~l~~d-~-------dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l-------------- 206 (360)
.+.++|++| . ++.+||||+. .++|++||..+++...+....
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~-----------------~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~ 214 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFL-----------------RGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGK 214 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETT-----------------TTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTE
T ss_pred CccceEEEecccCCCCCCccEEEEEcCC-----------------CCcEEEEECCCCcEEEEccCCCccccCcceEECCE
Confidence 578999999 2 4679999975 357888888777665544210
Q ss_pred -----cCcceEEEecC----CCEEEEEeCCCCEEEEEEec---C-CcCcceeeeccCCCCCCc--eeEEc-CCCCEEEEE
Q 018144 207 -----YFANGVALSRD----EDYVVVCESWKFRCRKYWLK---G-ERKGKLETFAENLPGAPD--NINLA-PDGTFWIAI 270 (360)
Q Consensus 207 -----~~pngia~~~d----g~~l~v~~t~~~~i~~~~~~---g-~~~~~~~~~~~~~~g~pd--~i~~d-~~G~lwva~ 270 (360)
....||+++++ ++.||+.-..+.+++++..+ . .....++.+.+..+ ..+ +++.| .+|+||++.
T Consensus 215 ~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~-~s~~~~~~~D~~~G~ly~~~ 293 (381)
T 3q6k_A 215 EYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGK-YNDAIALAYDPKTKVIFFAE 293 (381)
T ss_dssp EEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCT-TCCEEEEEECTTTCEEEEEE
T ss_pred EeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCC-CCCcceEEEeCCCCeEEEEe
Confidence 14568999998 88999999988899999842 2 22233444443321 234 45676 899999999
Q ss_pred ecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCC-c-----EEEEEeCCCCCcccceeeEEEE-CCE
Q 018144 271 IKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDG-T-----IIRNLVDPTGQLMSFVTSGLQV-DNH 343 (360)
Q Consensus 271 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g-~-----~~~~~~~~~g~~~~~~t~~~~~-~g~ 343 (360)
.. ...|.+.++++ . ....++++ . +.+++++..+ +|+
T Consensus 294 ~~----------------------------------~~aI~~w~~~~~~~~~~n~~~l~~d~-~--l~~pd~~~i~~~g~ 336 (381)
T 3q6k_A 294 AN----------------------------------TKQVSCWNTQKMPLRMKNTDVVYTSS-R--FVFGTDISVDSKGG 336 (381)
T ss_dssp SS----------------------------------SSEEEEEETTSCSBCGGGEEEEEECT-T--CCSEEEEEECTTSC
T ss_pred cc----------------------------------CCeEEEEeCCCCccccCceEEEEECC-C--ccccCeEEECCCCe
Confidence 87 47899999987 2 24455665 3 5678888886 699
Q ss_pred EEEEeCC
Q 018144 344 LYVISLT 350 (360)
Q Consensus 344 Lylgs~~ 350 (360)
||+.+..
T Consensus 337 Lwv~sn~ 343 (381)
T 3q6k_A 337 LWFMSNG 343 (381)
T ss_dssp EEEEECS
T ss_pred EEEEECc
Confidence 9998754
No 108
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.91 E-value=3.8e-07 Score=79.68 Aligned_cols=153 Identities=14% Similarity=0.130 Sum_probs=107.5
Q ss_pred cccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC--CCcCcceEEEecCCCEEEEEeC
Q 018144 149 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--GFYFANGVALSRDEDYVVVCES 226 (360)
Q Consensus 149 ~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~--~l~~pngia~~~dg~~l~v~~t 226 (360)
.+..+|.++. |+||++... ...+.|.++|+++|++..... .-.+..|+++ +++.||+...
T Consensus 21 ~ftqGL~~~~-~~LyestG~---------------~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~--~~~~ly~ltw 82 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGE---------------TGRSSVRKVDLETGRILQRAEVPPPYFGAGIVA--WRDRLIQLTW 82 (243)
T ss_dssp CCEEEEEEET-TEEEEEECC---------------TTSCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEES
T ss_pred cccccEEEEC-CEEEEECCC---------------CCCceEEEEECCCCCEEEEEeCCCCcceeEEEE--eCCEEEEEEe
Confidence 4677999886 899998643 113479999999998866443 2334455555 4567999999
Q ss_pred CCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCC
Q 018144 227 WKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGG 306 (360)
Q Consensus 227 ~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 306 (360)
..+.+++||.+.- .....+. .++.+-+++.|. +.||++...
T Consensus 83 ~~~~v~v~D~~tl--~~~~ti~--~~~~Gwglt~dg-~~L~vSdgs---------------------------------- 123 (243)
T 3mbr_X 83 RNHEGFVYDLATL--TPRARFR--YPGEGWALTSDD-SHLYMSDGT---------------------------------- 123 (243)
T ss_dssp SSSEEEEEETTTT--EEEEEEE--CSSCCCEEEECS-SCEEEECSS----------------------------------
T ss_pred eCCEEEEEECCcC--cEEEEEe--CCCCceEEeeCC-CEEEEECCC----------------------------------
Confidence 8999999997532 2222232 223455666553 479999743
Q ss_pred ceEEEEECCC-CcEEEEEeCC-CCCcccceeeEEEECCEEEEEeCCCCeEEEEeC
Q 018144 307 GAHLIHVAED-GTIIRNLVDP-TGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 307 ~~~v~~~~~~-g~~~~~~~~~-~g~~~~~~t~~~~~~g~Lylgs~~~~~i~~~~l 359 (360)
+.|..+|++ .+++..+... +|..+.....+...+|+||+.....|.|.+++.
T Consensus 124 -~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp 177 (243)
T 3mbr_X 124 -AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDP 177 (243)
T ss_dssp -SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECT
T ss_pred -CeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEEC
Confidence 589999985 5777777542 444455666667779999999999999999975
No 109
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.85 E-value=4.4e-07 Score=87.29 Aligned_cols=155 Identities=16% Similarity=0.251 Sum_probs=94.7
Q ss_pred eEecCCCCCCcceEEEcCCCC--EEEEecCCeEEEEE-CCee--eE----------------------EEec-----CCe
Q 018144 71 IKVGEGSVNHPEDASMDKNGV--IYTATRDGWIKRLQ-DGTW--VN----------------------WKFI-----DSH 118 (360)
Q Consensus 71 ~~~~~~~~~~Pe~i~~d~~G~--l~v~~~~G~I~~~~-~g~~--~~----------------------~~~~-----~g~ 118 (360)
+.+..+ |..|.+|++.++|. ||++...|+|++++ +|.. .. ++.. ++.
T Consensus 7 ~~va~g-L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~ 85 (463)
T 2wg3_C 7 QEVVSG-LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGK 85 (463)
T ss_dssp EEEEEE-ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCE
T ss_pred EEeccC-CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCE
Confidence 445544 79999999999985 99999999999997 5431 00 1111 246
Q ss_pred EEEEeCC-------------CcEEEEc-CC--------C-eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCcc
Q 018144 119 LIICDNA-------------NGLHKVS-ED--------G-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHE 175 (360)
Q Consensus 119 L~v~~~~-------------~gl~~~~-~~--------g-~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~ 175 (360)
|||+... ..|.++. .. . .+++.+............|++++||.|||+..........
T Consensus 86 lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~ 165 (463)
T 2wg3_C 86 LYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDD 165 (463)
T ss_dssp EEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHH
T ss_pred EEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCc
Confidence 8886431 2455555 21 1 2333322111223456789999999999996542110000
Q ss_pred ceecccccCCccEEEEEcCCCC--------------------eEEEEeCCCcCcceEEEecC-----CC-EEEEEeC
Q 018144 176 YCLDILEGKPHGQLLKYDPSSN--------------------ITTLVADGFYFANGVALSRD-----ED-YVVVCES 226 (360)
Q Consensus 176 ~~~~~~~~~~~g~l~~~d~~tg--------------------~~~~~~~~l~~pngia~~~d-----g~-~l~v~~t 226 (360)
....--.....|.|+|+|+++. ..+++..++..|.|++++++ |+ .+|.+|.
T Consensus 166 ~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 166 MEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp HHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC
T ss_pred cccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEeccc
Confidence 0000001233589999999852 23567788999999999997 33 5677775
No 110
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.82 E-value=4.6e-06 Score=77.37 Aligned_cols=144 Identities=8% Similarity=0.056 Sum_probs=81.3
Q ss_pred eEEEEeCCCcEEEEc-C-CC-eEEEeeccCCccccccccEEEcCCCc-EEE--EeCCCCCCCccceecccccCCccE--E
Q 018144 118 HLIICDNANGLHKVS-E-DG-VENFLSYVNGSKLRFANDVVEASDGS-LYF--TVSSSKYLPHEYCLDILEGKPHGQ--L 189 (360)
Q Consensus 118 ~L~v~~~~~gl~~~~-~-~g-~~~l~~~~~~~~~~~~n~l~~d~dG~-l~v--td~~~~~~~~~~~~~~~~~~~~g~--l 189 (360)
.||+++.. .+..++ . +| ...+.....+ ..+.++++++||+ +|+ ++.. ++ ..+....+. ..|. +
T Consensus 53 ~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~---g~~~~~~~spdg~~l~~~~~~~~-~~--~~~~~~~~~--~~g~v~v 123 (365)
T 1jof_A 53 NIYGAAMK-KWSSFAVKSPTEIVHEASHPIG---GHPRANDADTNTRAIFLLAAKQP-PY--AVYANPFYK--FAGYGNV 123 (365)
T ss_dssp EEEEEEBT-EEEEEEEEETTEEEEEEEEECC---SSGGGGCTTSCCEEEEEEECSST-TC--CEEEEEESS--SCCEEEE
T ss_pred EEEEEccc-eEEEEEECCCCCEEEeeEeecC---CCCccEEECCCCCEEEEEEecCC-cc--eeccceeec--CCceEEE
Confidence 48888766 677777 4 67 5433221111 1367789999997 343 3210 00 000000000 1233 4
Q ss_pred EEEcCCCCeEEEEe-----CCCcCcceEEEecCCCEEEEEeCCCCEEEEEEec-CCcCcceeeeccCC-CCCCceeEEcC
Q 018144 190 LKYDPSSNITTLVA-----DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLK-GERKGKLETFAENL-PGAPDNINLAP 262 (360)
Q Consensus 190 ~~~d~~tg~~~~~~-----~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~-g~~~~~~~~~~~~~-~g~pd~i~~d~ 262 (360)
+.++.+ |+..... .....+++++++|||+.+|+++.+.++|..|+++ ..+......+.... ...|.++++++
T Consensus 124 ~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp 202 (365)
T 1jof_A 124 FSVSET-GKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP 202 (365)
T ss_dssp EEECTT-CCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT
T ss_pred EccCCC-CcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC
Confidence 445433 5543221 1346789999999999999999878899999986 32222111121011 23588999999
Q ss_pred CCC-EEEEEe
Q 018144 263 DGT-FWIAII 271 (360)
Q Consensus 263 ~G~-lwva~~ 271 (360)
+|+ +|++..
T Consensus 203 dg~~l~v~~~ 212 (365)
T 1jof_A 203 TGNYLYALME 212 (365)
T ss_dssp TSSEEEEEET
T ss_pred CCCEEEEEEC
Confidence 995 777764
No 111
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.81 E-value=4.3e-06 Score=73.77 Aligned_cols=185 Identities=10% Similarity=0.106 Sum_probs=118.7
Q ss_pred CCeEEE-EeCCCcEEEEcCCC--eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEE
Q 018144 116 DSHLII-CDNANGLHKVSEDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKY 192 (360)
Q Consensus 116 ~g~L~v-~~~~~gl~~~~~~g--~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~ 192 (360)
+++||+ .+....|++++.+| .+.+. ..+ ...+.+|+++++|.+|+++.. .++++.+
T Consensus 38 ~~~L~aV~d~~~~I~~ld~~g~v~~~i~--l~g--~~D~EGIa~~~~g~~~vs~E~-----------------~~~l~~~ 96 (255)
T 3qqz_A 38 SNTLFSTINKPAAIVEMTTNGDLIRTIP--LDF--VKDLETIEYIGDNQFVISDER-----------------DYAIYVI 96 (255)
T ss_dssp TTEEEEEEETTEEEEEEETTCCEEEEEE--CSS--CSSEEEEEECSTTEEEEEETT-----------------TTEEEEE
T ss_pred CCEEEEEECCCCeEEEEeCCCCEEEEEe--cCC--CCChHHeEEeCCCEEEEEECC-----------------CCcEEEE
Confidence 578996 44445688999557 33332 122 245789999999999998643 3466665
Q ss_pred cCCC-CeEE---EEeCCC-cCc-----ceEEEecCCCEEEEEeCCCC-EEEEEEecCC-cCcceeeecc-----C-CCCC
Q 018144 193 DPSS-NITT---LVADGF-YFA-----NGVALSRDEDYVVVCESWKF-RCRKYWLKGE-RKGKLETFAE-----N-LPGA 254 (360)
Q Consensus 193 d~~t-g~~~---~~~~~l-~~p-----ngia~~~dg~~l~v~~t~~~-~i~~~~~~g~-~~~~~~~~~~-----~-~~g~ 254 (360)
+... ++.. .....+ ..+ -|++++++++.||++.-... +|+.++ |- ......+..+ . ...-
T Consensus 97 ~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~~~~~~~~~~~~d 174 (255)
T 3qqz_A 97 SLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISKDKALQRQFTLDD 174 (255)
T ss_dssp EECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEECHHHHHTCCSSC
T ss_pred EcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeeecchhhccccccCC
Confidence 4322 3211 121111 123 69999999988888865544 787776 21 0112222211 1 1123
Q ss_pred CceeEEcC-CCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCC----
Q 018144 255 PDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQ---- 329 (360)
Q Consensus 255 pd~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~---- 329 (360)
+.++++|+ .|++||-... ...|+.+|.+|+++..+.-..|.
T Consensus 175 ~S~l~~dp~tg~lliLS~~----------------------------------s~~L~~~d~~g~~~~~~~L~~g~~~l~ 220 (255)
T 3qqz_A 175 VSGAEFNQQKNTLLVLSHE----------------------------------SRALQEVTLVGEVIGEMSLTKGSRGLS 220 (255)
T ss_dssp CCEEEEETTTTEEEEEETT----------------------------------TTEEEEECTTCCEEEEEECSTTGGGCS
T ss_pred ceeEEEcCCCCeEEEEECC----------------------------------CCeEEEEcCCCCEEEEEEcCCccCCcc
Confidence 78999986 6679987765 35899999999988888766542
Q ss_pred -cccceeeEEEEC-CEEEEEeCCCCeEEEEe
Q 018144 330 -LMSFVTSGLQVD-NHLYVISLTSNFIGKVQ 358 (360)
Q Consensus 330 -~~~~~t~~~~~~-g~Lylgs~~~~~i~~~~ 358 (360)
.+..+.+++.+. |+|||.+= .|.+.++.
T Consensus 221 ~~~~qpEGia~d~~G~lyIvsE-~n~~y~f~ 250 (255)
T 3qqz_A 221 HNIKQAEGVAMDASGNIYIVSE-PNRFYRFT 250 (255)
T ss_dssp SCCCSEEEEEECTTCCEEEEET-TTEEEEEE
T ss_pred cccCCCCeeEECCCCCEEEEcC-CceEEEEE
Confidence 245778999885 99999964 57888875
No 112
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.80 E-value=1.2e-08 Score=98.83 Aligned_cols=77 Identities=18% Similarity=0.180 Sum_probs=59.2
Q ss_pred CccccccccEEEcCCCcEEE-EeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC--CcCcceEEEecCCCEE
Q 018144 145 GSKLRFANDVVEASDGSLYF-TVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FYFANGVALSRDEDYV 221 (360)
Q Consensus 145 ~~~~~~~n~l~~d~dG~l~v-td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~--l~~pngia~~~dg~~l 221 (360)
+..++.|++|++|++|+||| ||.+.. ... .++....+.|+++++.+|+++.+..+ ...|||++++||++.|
T Consensus 472 ~~~fnsPDnL~fd~~G~LWf~TD~~~~--~~g----~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktL 545 (592)
T 4a9v_A 472 QNMFNSPDGLGFDKAGRLWILTDGDSS--NAG----DFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTL 545 (592)
T ss_dssp TTCCCCEEEEEECTTCCEEEEECCCCC--CSG----GGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEE
T ss_pred cCccCCCCceEECCCCCEEEEeCCCcC--ccc----cccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEE
Confidence 34688999999999999999 887631 111 12233456899999999999887753 4679999999999999
Q ss_pred EEEeCC
Q 018144 222 VVCESW 227 (360)
Q Consensus 222 ~v~~t~ 227 (360)
||+-..
T Consensus 546 fV~vQH 551 (592)
T 4a9v_A 546 FVGIQH 551 (592)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 998653
No 113
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.78 E-value=3.9e-07 Score=84.44 Aligned_cols=184 Identities=13% Similarity=0.085 Sum_probs=108.5
Q ss_pred cccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCC--CCeEEEEe-CC------CcCcceEEEec--C
Q 018144 149 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS--SNITTLVA-DG------FYFANGVALSR--D 217 (360)
Q Consensus 149 ~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~--tg~~~~~~-~~------l~~pngia~~~--d 217 (360)
..+.||+++++|.+|++.....-+...+ .-...|+|+++|++ +++.+.+. ++ ...|.||.+.+ |
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~-----~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~d 124 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSF-----DPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDD 124 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC----------------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTT
T ss_pred CCcceeEEcCCCeEEEEeccccCCCccc-----CCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCC
Confidence 3588999999999999863211111111 11246899999987 34444432 22 24799999877 3
Q ss_pred CC-EEEEEeCC--CCE--EEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHH
Q 018144 218 ED-YVVVCESW--KFR--CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLA 292 (360)
Q Consensus 218 g~-~l~v~~t~--~~~--i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~ 292 (360)
+. .|||++.. +.+ |++++.++........+....-..|+++++|++|++|+++..-- ..|..+.. .
T Consensus 125 g~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~f--------td~~~~~~-e 195 (355)
T 3sre_A 125 NTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYF--------IDPYLKSW-E 195 (355)
T ss_dssp CCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSC--------SSHHHHHH-H
T ss_pred CcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEe--------CCcccccc-h
Confidence 43 69999876 334 55666544322222233222223689999999999999875310 11111110 0
Q ss_pred hCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEE-C-CEEEEEeCCCCeEEEEeCC
Q 018144 293 AYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-D-NHLYVISLTSNFIGKVQLS 360 (360)
Q Consensus 293 ~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~-g~Lylgs~~~~~i~~~~l~ 360 (360)
.+ ...+.+.|++++++ ++..... + +..+.++... + ..||+++...++|.+++++
T Consensus 196 ~~--------~~~~~g~vyr~d~~-~~~~~~~---~--l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 196 MH--------LGLAWSFVTYYSPN-DVRVVAE---G--FDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp HH--------TTCCCEEEEEECTT-CCEEEEE---E--ESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred hh--------ccCCccEEEEEECC-eEEEeec---C--CcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 00 02235899999984 4332222 2 3445666665 3 5899999999999999863
No 114
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.77 E-value=2.8e-06 Score=79.02 Aligned_cols=202 Identities=13% Similarity=0.127 Sum_probs=120.2
Q ss_pred CCCCEEEEecCCeEEEEE--CCeeeE-E----------EecCCeEEEEeCCCcEEEEc-CCC-eEEEeeccCCcc--ccc
Q 018144 88 KNGVIYTATRDGWIKRLQ--DGTWVN-W----------KFIDSHLIICDNANGLHKVS-EDG-VENFLSYVNGSK--LRF 150 (360)
Q Consensus 88 ~~G~l~v~~~~G~I~~~~--~g~~~~-~----------~~~~g~L~v~~~~~gl~~~~-~~g-~~~l~~~~~~~~--~~~ 150 (360)
.+|.||+++.+|.|+.++ +|+..- . ...++.+|++....+++.++ .+| ....... .... ...
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~-~~~~~~~~~ 180 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNL-DMPSLSLRG 180 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC-CC-----CC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeC-CCCceeecC
Confidence 378999999999999999 675421 0 12367899988777899999 788 4332221 1111 111
Q ss_pred cccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCc-------------ceEEEecC
Q 018144 151 ANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA-------------NGVALSRD 217 (360)
Q Consensus 151 ~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~p-------------ngia~~~d 217 (360)
....+++ +|.+|+. ...+.|+.+|+.+|+....... ..| ....+ .+
T Consensus 181 ~~~~~~~-~~~v~~g------------------~~~g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~~~~~~~p~~-~~ 239 (376)
T 3q7m_A 181 ESAPTTA-FGAAVVG------------------GDNGRVSAVLMEQGQMIWQQRI-SQATGSTEIDRLSDVDTTPVV-VN 239 (376)
T ss_dssp CCCCEEE-TTEEEEC------------------CTTTEEEEEETTTCCEEEEEEC-CC-----------CCCCCCEE-ET
T ss_pred CCCcEEE-CCEEEEE------------------cCCCEEEEEECCCCcEEEEEec-ccCCCCcccccccccCCCcEE-EC
Confidence 1223333 6789983 3457899999988877543211 111 11122 23
Q ss_pred CCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCcc
Q 018144 218 EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 297 (360)
Q Consensus 218 g~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 297 (360)
..+|++.. .+.|+.++.+..+. .+..... ....+..+ ++++|+++..
T Consensus 240 -~~v~~~~~-~g~l~~~d~~tG~~----~w~~~~~-~~~~~~~~-~~~l~~~~~~------------------------- 286 (376)
T 3q7m_A 240 -GVVFALAY-NGNLTALDLRSGQI----MWKRELG-SVNDFIVD-GNRIYLVDQN------------------------- 286 (376)
T ss_dssp -TEEEEECT-TSCEEEEETTTCCE----EEEECCC-CEEEEEEE-TTEEEEEETT-------------------------
T ss_pred -CEEEEEec-CcEEEEEECCCCcE----EeeccCC-CCCCceEE-CCEEEEEcCC-------------------------
Confidence 45887764 46799999753221 1211121 23345554 6789999865
Q ss_pred ccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCCCCeEEEEe
Q 018144 298 FSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 358 (360)
Q Consensus 298 ~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~~~i~~~~ 358 (360)
+.|+.+|+ +|+.+.......+ ...+.....+++||+++.. ..|..++
T Consensus 287 ----------g~l~~~d~~tG~~~w~~~~~~~---~~~~~~~~~~~~l~v~~~~-g~l~~~d 334 (376)
T 3q7m_A 287 ----------DRVMALTIDGGVTLWTQSDLLH---RLLTSPVLYNGNLVVGDSE-GYLHWIN 334 (376)
T ss_dssp ----------CCEEEEETTTCCEEEEECTTTT---SCCCCCEEETTEEEEECTT-SEEEEEE
T ss_pred ----------CeEEEEECCCCcEEEeecccCC---CcccCCEEECCEEEEEeCC-CeEEEEE
Confidence 57899996 6888766653222 1234445568899998864 3455554
No 115
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.75 E-value=2.6e-06 Score=77.49 Aligned_cols=79 Identities=16% Similarity=0.114 Sum_probs=54.6
Q ss_pred CcceEEEec-CCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcch
Q 018144 208 FANGVALSR-DEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSK 285 (360)
Q Consensus 208 ~pngia~~~-dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~ 285 (360)
.+.++++++ |++.+|++ .+.|.+|+++..+. ...+. ....|.+++++++|+ ||++...
T Consensus 256 ~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~~--~~~~~--~~~~~~~~~~s~dg~~l~~~~~~------------- 315 (349)
T 1jmx_B 256 LYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRKL--IKAAN--LDHTYYCVAFDKKGDKLYLGGTF------------- 315 (349)
T ss_dssp CEEEEEECSSCTTEEEEE---ESEEEEEETTTTEE--EEEEE--CSSCCCEEEECSSSSCEEEESBS-------------
T ss_pred cceeeEecCCCCCEEEEE---cCeEEEEECccCeE--EEEEc--CCCCccceEECCCCCEEEEecCC-------------
Confidence 567888889 99999988 46899999864321 11221 233578999999984 7775322
Q ss_pred hHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCC
Q 018144 286 LIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTG 328 (360)
Q Consensus 286 ~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g 328 (360)
+.|..+|. .++.+..+..+.|
T Consensus 316 ----------------------~~v~v~d~~~~~~~~~~~~~~~ 337 (349)
T 1jmx_B 316 ----------------------NDLAVFNPDTLEKVKNIKLPGG 337 (349)
T ss_dssp ----------------------SEEEEEETTTTEEEEEEECSSS
T ss_pred ----------------------CeEEEEeccccceeeeeecCCC
Confidence 57888886 5777888776633
No 116
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.75 E-value=2e-06 Score=84.59 Aligned_cols=224 Identities=15% Similarity=0.110 Sum_probs=135.9
Q ss_pred CcceEEEcCCC-CEEEEecCCeEEEEE-C---Cee----------eEEEe------cCCeEEEEeC-CCcEEEEc-CCC-
Q 018144 80 HPEDASMDKNG-VIYTATRDGWIKRLQ-D---GTW----------VNWKF------IDSHLIICDN-ANGLHKVS-EDG- 135 (360)
Q Consensus 80 ~Pe~i~~d~~G-~l~v~~~~G~I~~~~-~---g~~----------~~~~~------~~g~L~v~~~-~~gl~~~~-~~g- 135 (360)
.|.+++++++| .||+++.++.|..++ + ++. ..+.. .+..||+++. ...+..+| .++
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 48899999987 578888889999988 3 221 12222 2446888885 45677777 566
Q ss_pred -eEEEeec---cCC---ccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE--EeCC
Q 018144 136 -VENFLSY---VNG---SKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL--VADG 205 (360)
Q Consensus 136 -~~~l~~~---~~~---~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~--~~~~ 205 (360)
+..+... ..+ .+-..+..++++++|. +|++. ...+.|..+|..+++... ....
T Consensus 260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~-----------------~~~g~i~vvd~~~~~~l~~~~i~~ 322 (543)
T 1nir_A 260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV-----------------KETGKVLLVNYKDIDNLTVTSIGA 322 (543)
T ss_dssp EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE-----------------TTTTEEEEEECTTSSSCEEEEEEC
T ss_pred cceeecccCcccCccccccCCceEEEEECCCCCEEEEEE-----------------CCCCeEEEEEecCCCcceeEEecc
Confidence 4444321 111 0112466788888774 55543 235789999886543211 1123
Q ss_pred CcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeecc-CCCCCC-ceeE-EcCC-CCEEEEEecCchhHHHHh
Q 018144 206 FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAE-NLPGAP-DNIN-LAPD-GTFWIAIIKLDARRMKIL 281 (360)
Q Consensus 206 l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~-~~~g~p-d~i~-~d~~-G~lwva~~~~~~~~~~~~ 281 (360)
..+|.+++++|||+++|++....+.|..+|.+..+.. ..+.. ..| .| .+.. .+++ |.+|++....
T Consensus 323 ~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~--~~i~~g~~p-h~g~g~~~~~p~~g~~~~s~~~~-------- 391 (543)
T 1nir_A 323 APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLS--ALVDVGKTP-HPGRGANFVHPKYGPVWSTSHLG-------- 391 (543)
T ss_dssp CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEE--EEEECSSSB-CCTTCEEEEETTTEEEEEEEBSS--------
T ss_pred CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEE--EeeccCCCC-CCCCCcccCCCCCccEEEeccCC--------
Confidence 4579999999999999999887889999998643221 11111 111 12 2333 3665 7899876421
Q ss_pred hcchhHHHHHHhCCccccccccCCCceEEEEECCC--------CcEEEEEeCCCCCcccceeeEEEE--CCEEEEEeC-C
Q 018144 282 NSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED--------GTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISL-T 350 (360)
Q Consensus 282 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~--------g~~~~~~~~~~g~~~~~~t~~~~~--~g~Lylgs~-~ 350 (360)
.+.|..++.+ +++++.+....+. +..+..+ +.+||+++- +
T Consensus 392 -------------------------d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~----~~~v~~~pdg~~l~v~~~~~ 442 (543)
T 1nir_A 392 -------------------------DGSISLIGTDPKNHPQYAWKKVAELQGQGGG----SLFIKTHPKSSHLYVDTTFN 442 (543)
T ss_dssp -------------------------SSEEEEEECCTTTCTTTBTSEEEEEECSCSC----CCCEECCTTCCEEEECCTTC
T ss_pred -------------------------CceEEEEEeCCCCCchhcCeEEEEEEcCCCC----ceEEEcCCCCCcEEEecCCC
Confidence 1345555532 6888888764432 2233443 478999873 2
Q ss_pred -----CCeEEEEeCC
Q 018144 351 -----SNFIGKVQLS 360 (360)
Q Consensus 351 -----~~~i~~~~l~ 360 (360)
++.|.+++++
T Consensus 443 ~~~~~~~~v~v~d~~ 457 (543)
T 1nir_A 443 PDARISQSVAVFDLK 457 (543)
T ss_dssp SSHHHHTCEEEEETT
T ss_pred CCcccCceEEEEECC
Confidence 4488888753
No 117
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.74 E-value=2.4e-06 Score=77.79 Aligned_cols=101 Identities=19% Similarity=0.153 Sum_probs=70.9
Q ss_pred ccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-------CcCcceEEEecCCCEE
Q 018144 150 FANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-------FYFANGVALSRDEDYV 221 (360)
Q Consensus 150 ~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-------l~~pngia~~~dg~~l 221 (360)
.+.+++++++|+ +|+++. ..+.|+.+|.++++....... ...++++++++||+.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~-----------------~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 106 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNN-----------------HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEV 106 (349)
T ss_dssp SSCEEEECTTSSEEEEEET-----------------TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEE
T ss_pred CCceeEECCCCCEEEEEeC-----------------CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEE
Confidence 477899999996 888753 246899999988876543321 2338999999999999
Q ss_pred EEEeCC-----------CCEEEEEEecCCcCc-ceeeeccCCCCCCceeEEcCCCCEEEE
Q 018144 222 VVCESW-----------KFRCRKYWLKGERKG-KLETFAENLPGAPDNINLAPDGTFWIA 269 (360)
Q Consensus 222 ~v~~t~-----------~~~i~~~~~~g~~~~-~~~~~~~~~~g~pd~i~~d~~G~lwva 269 (360)
|++... .+.|..++++..+.. ....+. .+..+.+++++++|++|++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~l~~~ 164 (349)
T 1jmx_B 107 YATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP--MPRQVYLMRAADDGSLYVA 164 (349)
T ss_dssp EEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE--CCSSCCCEEECTTSCEEEE
T ss_pred EEEcccccccccccccCCCeEEEEECCCccccceeeecc--CCCcccceeECCCCcEEEc
Confidence 998843 468999998643222 122221 2334677889999998885
No 118
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.71 E-value=2.7e-06 Score=80.84 Aligned_cols=224 Identities=11% Similarity=0.005 Sum_probs=120.3
Q ss_pred CCEEEEecC-----CeEEEEE--CCeeeE---------EEe--cCCeEEEEeC----------CCcEEEEc-CCC--eEE
Q 018144 90 GVIYTATRD-----GWIKRLQ--DGTWVN---------WKF--IDSHLIICDN----------ANGLHKVS-EDG--VEN 138 (360)
Q Consensus 90 G~l~v~~~~-----G~I~~~~--~g~~~~---------~~~--~~g~L~v~~~----------~~gl~~~~-~~g--~~~ 138 (360)
..+|+.+.. +.|..|| ++++.. +.. .+.+|||++. .+.+..|| .++ ...
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~ 164 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIAD 164 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEE
T ss_pred CEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCCceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEE
Confidence 368988842 6899998 554321 221 2456999984 23578888 565 333
Q ss_pred EeeccCCc--cccccccEEEcCCC-cEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC----CcCcce
Q 018144 139 FLSYVNGS--KLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG----FYFANG 211 (360)
Q Consensus 139 l~~~~~~~--~~~~~n~l~~d~dG-~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~----l~~png 211 (360)
+....... ....|.++++++|| ++|+++.. ..+.|..+|..++++...... ...|.|
T Consensus 165 I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----------------~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g 228 (426)
T 3c75_H 165 IELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----------------PAPAVGVVDLEGKTFDRMLDVPDCYHIFPAS 228 (426)
T ss_dssp EEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----------------SSCEEEEEETTTTEEEEEEECCSEEEEEEEE
T ss_pred EECCCccccccCCCcceEEEcCCCCEEEEEecC----------------CCCeEEEEECCCCeEEEEEEcCCceeeccCC
Confidence 32110000 01468999999999 69998632 124566666655544321110 011222
Q ss_pred ----EEE-------------------------------------ecCCCEEEEEeCCCCEEEEEEecCCcCc---ceeee
Q 018144 212 ----VAL-------------------------------------SRDEDYVVVCESWKFRCRKYWLKGERKG---KLETF 247 (360)
Q Consensus 212 ----ia~-------------------------------------~~dg~~l~v~~t~~~~i~~~~~~g~~~~---~~~~~ 247 (360)
+++ +++++.+|+... .++|+.+|..+.... ..+..
T Consensus 229 ~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g~V~ViD~~~~~~~v~~~~~~~ 307 (426)
T 3c75_H 229 PTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-TGKIFQADLTAEGATFRAPIEAL 307 (426)
T ss_dssp TTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-TSEEEEEEECSSCEEECCCEESS
T ss_pred CcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-CCcEEEEeccCCceEEeeeeeec
Confidence 333 444444444433 345666665432211 01100
Q ss_pred ccC---CCCCCce---eEEcCCC-CEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcE
Q 018144 248 AEN---LPGAPDN---INLAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTI 319 (360)
Q Consensus 248 ~~~---~~g~pd~---i~~d~~G-~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~ 319 (360)
... ..-.|.+ ++++++| ++||++...... -+ -...+.|..||. .+++
T Consensus 308 ~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~g----th---------------------k~~s~~VsVID~~T~kv 362 (426)
T 3c75_H 308 TEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEW----KH---------------------KAASRFVVVLNAETGER 362 (426)
T ss_dssp CTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTT----CT---------------------TSCEEEEEEEETTTCCE
T ss_pred cccccccccccCCceeeEEcCCCCEEEEEecccccc----cc---------------------cCCCCEEEEEECCCCeE
Confidence 000 0002333 7888876 589987531000 00 001357999996 5788
Q ss_pred EEEEeCCCCCcccceeeEEEE--CC-EEEEEeCCCCeEEEEeCC
Q 018144 320 IRNLVDPTGQLMSFVTSGLQV--DN-HLYVISLTSNFIGKVQLS 360 (360)
Q Consensus 320 ~~~~~~~~g~~~~~~t~~~~~--~g-~Lylgs~~~~~i~~~~l~ 360 (360)
+..+..+. .+.++... +. .||+++..++.|.+++++
T Consensus 363 v~~I~vg~-----~P~gia~spDg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 363 INKIELGH-----EIDSINVSQDAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp EEEEEEEE-----EECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred EEEEECCC-----CcCeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence 88876432 24445554 45 799988899999999863
No 119
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.69 E-value=3.5e-06 Score=79.86 Aligned_cols=177 Identities=14% Similarity=0.159 Sum_probs=106.0
Q ss_pred CCCcceEEEcCCCCEEEEe-cC------CeEEEEE--CCeee-EEE--------------ec-CCeEEEEeC--------
Q 018144 78 VNHPEDASMDKNGVIYTAT-RD------GWIKRLQ--DGTWV-NWK--------------FI-DSHLIICDN-------- 124 (360)
Q Consensus 78 ~~~Pe~i~~d~~G~l~v~~-~~------G~I~~~~--~g~~~-~~~--------------~~-~g~L~v~~~-------- 124 (360)
...|..+...++| ||+++ .+ |+|..+| ++++. .|. .. .+.++++++
T Consensus 137 ~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~ 215 (462)
T 2ece_A 137 YSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIED 215 (462)
T ss_dssp EEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTT
T ss_pred CCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccc
Confidence 3579999999999 99876 33 6899998 44432 111 22 234666543
Q ss_pred -----------CCcEEEEc-CCC--eEEEeeccCCccccccccEEE--cCCC-cEEEEeC-CCCCCCccceecccccCCc
Q 018144 125 -----------ANGLHKVS-EDG--VENFLSYVNGSKLRFANDVVE--ASDG-SLYFTVS-SSKYLPHEYCLDILEGKPH 186 (360)
Q Consensus 125 -----------~~gl~~~~-~~g--~~~l~~~~~~~~~~~~n~l~~--d~dG-~l~vtd~-~~~~~~~~~~~~~~~~~~~ 186 (360)
.+.|..++ .++ ...+..... -..|.+|.+ +++| .+|++.. +.+. -.
T Consensus 216 g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~---g~~P~~i~f~~~Pdg~~aYV~~e~~~~~-------------Ls 279 (462)
T 2ece_A 216 GLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE---NRMALELRPLHDPTKLMGFINMVVSLKD-------------LS 279 (462)
T ss_dssp CCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT---EEEEEEEEECSSTTCCEEEEEEEEETTT-------------CC
T ss_pred ccchhhhhhccCCEEEEEECCCCcEeeEEecCCC---CCccceeEeeECCCCCEEEEEEeeeccC-------------CC
Confidence 35677777 555 333322111 134667766 8888 5888753 0000 12
Q ss_pred cEEEEEcCCCCeEEEEe-----C----C------------CcCcceEEEecCCCEEEEEeCCCCEEEEEEecCC-cCcce
Q 018144 187 GQLLKYDPSSNITTLVA-----D----G------------FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGE-RKGKL 244 (360)
Q Consensus 187 g~l~~~d~~tg~~~~~~-----~----~------------l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~-~~~~~ 244 (360)
+.|+++..+.|+++... . . ...|.+|.+++||++|||++.+.+.|..|+++.. +....
T Consensus 280 s~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv 359 (462)
T 2ece_A 280 SSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLT 359 (462)
T ss_dssp EEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEE
T ss_pred ceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE
Confidence 34443332224332211 1 0 2458899999999999999999999999998532 11111
Q ss_pred eee-cc------------CCCCCCceeEEcCCCC-EEEEEe
Q 018144 245 ETF-AE------------NLPGAPDNINLAPDGT-FWIAII 271 (360)
Q Consensus 245 ~~~-~~------------~~~g~pd~i~~d~~G~-lwva~~ 271 (360)
..+ .. ...+.|.++.+++||+ +||++.
T Consensus 360 ~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNs 400 (462)
T 2ece_A 360 GKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNS 400 (462)
T ss_dssp EEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECC
T ss_pred EEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcC
Confidence 111 11 1234699999999995 888873
No 120
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.69 E-value=8.2e-06 Score=75.82 Aligned_cols=199 Identities=15% Similarity=0.176 Sum_probs=120.2
Q ss_pred CCCEEEEecCCeEEEEE--CCeeeE----------------EEecCCeEEEEeCCCcEEEEc-CCC-eEEEeeccC--Cc
Q 018144 89 NGVIYTATRDGWIKRLQ--DGTWVN----------------WKFIDSHLIICDNANGLHKVS-EDG-VENFLSYVN--GS 146 (360)
Q Consensus 89 ~G~l~v~~~~G~I~~~~--~g~~~~----------------~~~~~g~L~v~~~~~gl~~~~-~~g-~~~l~~~~~--~~ 146 (360)
+|.+|+++.+|.|+.++ +|+..- ....++.+|++....+++.++ .+| ......... +.
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~ 222 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGS 222 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC----
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCC
Confidence 67999999999999999 675321 012367899987667799999 678 433221110 00
Q ss_pred ----cccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEE
Q 018144 147 ----KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVV 222 (360)
Q Consensus 147 ----~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~ 222 (360)
.+.......+..+|.+|++. ..+.|+.+|+.+|+...... .....+++.+ ++.+|
T Consensus 223 ~~~~~~~~~~~~p~~~~~~v~~~~------------------~~g~l~~~d~~tG~~~w~~~-~~~~~~~~~~--~~~l~ 281 (376)
T 3q7m_A 223 TEIDRLSDVDTTPVVVNGVVFALA------------------YNGNLTALDLRSGQIMWKRE-LGSVNDFIVD--GNRIY 281 (376)
T ss_dssp -------CCCCCCEEETTEEEEEC------------------TTSCEEEEETTTCCEEEEEC-CCCEEEEEEE--TTEEE
T ss_pred cccccccccCCCcEEECCEEEEEe------------------cCcEEEEEECCCCcEEeecc-CCCCCCceEE--CCEEE
Confidence 00001111122368899953 34689999998888754332 3334455544 44688
Q ss_pred EEeCCCCEEEEEEecCCcCcceeeeccC-CC-CCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccc
Q 018144 223 VCESWKFRCRKYWLKGERKGKLETFAEN-LP-GAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQ 300 (360)
Q Consensus 223 v~~t~~~~i~~~~~~g~~~~~~~~~~~~-~~-g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 300 (360)
++.. .+.|+.++.+..+. .+... .. .......++ +|.+|+++..
T Consensus 282 ~~~~-~g~l~~~d~~tG~~----~w~~~~~~~~~~~~~~~~-~~~l~v~~~~---------------------------- 327 (376)
T 3q7m_A 282 LVDQ-NDRVMALTIDGGVT----LWTQSDLLHRLLTSPVLY-NGNLVVGDSE---------------------------- 327 (376)
T ss_dssp EEET-TCCEEEEETTTCCE----EEEECTTTTSCCCCCEEE-TTEEEEECTT----------------------------
T ss_pred EEcC-CCeEEEEECCCCcE----EEeecccCCCcccCCEEE-CCEEEEEeCC----------------------------
Confidence 8876 45799999754321 11111 11 112223333 5789998865
Q ss_pred cccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCCCC
Q 018144 301 FITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSN 352 (360)
Q Consensus 301 ~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~~ 352 (360)
+.|..+|+ +|+++..+....+. ..+.....+++||+++..+.
T Consensus 328 -------g~l~~~d~~tG~~~~~~~~~~~~---~~~~~~~~~~~l~v~~~~G~ 370 (376)
T 3q7m_A 328 -------GYLHWINVEDGRFVAQQKVDSSG---FQTEPVAADGKLLIQAKDGT 370 (376)
T ss_dssp -------SEEEEEETTTCCEEEEEECCTTC---BCSCCEEETTEEEEEBTTSC
T ss_pred -------CeEEEEECCCCcEEEEEecCCCc---ceeCCEEECCEEEEEeCCCE
Confidence 68999995 68888777653332 23344556899999997654
No 121
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.67 E-value=9.9e-06 Score=80.01 Aligned_cols=215 Identities=9% Similarity=-0.019 Sum_probs=133.7
Q ss_pred EcCCCCEEEEe-cCCeEEEEE--CCeee----------EEEe--cCCeEEEEeCCCcEEEEc-C--CCeEEEeeccCCcc
Q 018144 86 MDKNGVIYTAT-RDGWIKRLQ--DGTWV----------NWKF--IDSHLIICDNANGLHKVS-E--DGVENFLSYVNGSK 147 (360)
Q Consensus 86 ~d~~G~l~v~~-~~G~I~~~~--~g~~~----------~~~~--~~g~L~v~~~~~gl~~~~-~--~g~~~l~~~~~~~~ 147 (360)
.|+++.+|++. .+|.|..+| ++++. .+.. .+..+|+++....+..|| . ++ +.+.....+
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~-~~v~~i~~G-- 239 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP-TTVAEIKIG-- 239 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC-CEEEEEECC--
T ss_pred cCCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC-cEeEEEecC--
Confidence 34456778877 678888888 44332 1222 244689998777788898 4 44 222221122
Q ss_pred ccccccEEEc----CCC-cEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC--C----------CcCcc
Q 018144 148 LRFANDVVEA----SDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--G----------FYFAN 210 (360)
Q Consensus 148 ~~~~n~l~~d----~dG-~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~--~----------l~~pn 210 (360)
..|.+++++ +|| .+|+++. ..+.+..+|..|.+...... + .....
T Consensus 240 -~~P~~ia~s~~~~pDGk~l~v~n~-----------------~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva 301 (567)
T 1qks_A 240 -SEARSIETSKMEGWEDKYAIAGAY-----------------WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVA 301 (567)
T ss_dssp -SEEEEEEECCSTTCTTTEEEEEEE-----------------ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEE
T ss_pred -CCCceeEEccccCCCCCEEEEEEc-----------------cCCeEEEEECCCCcEEEEEeccccccccccccCCCceE
Confidence 247899999 588 5888753 24678889988776644321 1 11335
Q ss_pred eEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchhHHH
Q 018144 211 GVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKH 289 (360)
Q Consensus 211 gia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~ 289 (360)
++..++++..++++....+.|+.++....+.-....+ ....+|.++.+|++|+ +|++...
T Consensus 302 ~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i--~~~~~~~d~~~~pdgr~~~va~~~----------------- 362 (567)
T 1qks_A 302 AILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI--SAERFLHDGGLDGSHRYFITAANA----------------- 362 (567)
T ss_dssp EEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE--ECCSSEEEEEECTTSCEEEEEEGG-----------------
T ss_pred EEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee--eccccccCceECCCCCEEEEEeCC-----------------
Confidence 7888898888888888888999999754221111111 1223678899999997 5666654
Q ss_pred HHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccce-eeEE-EE--CCEEEEEe-CCCCeEEEEeC
Q 018144 290 VLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFV-TSGL-QV--DNHLYVIS-LTSNFIGKVQL 359 (360)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~-t~~~-~~--~g~Lylgs-~~~~~i~~~~l 359 (360)
.+.|..+|. +++++..+... |. ..++ .++. .+ ++.+|+.+ +.++.|.+++.
T Consensus 363 -----------------sn~V~ViD~~t~kl~~~i~vg-g~-~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~ 419 (567)
T 1qks_A 363 -----------------RNKLVVIDTKEGKLVAIEDTG-GQ-TPHPGRGANFVHPTFGPVWATSHMGDDSVALIGT 419 (567)
T ss_dssp -----------------GTEEEEEETTTTEEEEEEECS-SS-SBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEEC
T ss_pred -----------------CCeEEEEECCCCcEEEEEecc-Cc-CCCCccceeeECCCCCcEEEeCCCCCCeEEEecC
Confidence 357888885 56776666430 22 1221 2222 23 37899865 56688998875
No 122
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.63 E-value=6e-05 Score=67.74 Aligned_cols=213 Identities=13% Similarity=0.039 Sum_probs=129.7
Q ss_pred CcceEEEcCCCC-EEEEecCCeEEEEE--CCee--e-E----------EEe-cCC-eEEEEeCCCcEEEEc-CCC--eEE
Q 018144 80 HPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW--V-N----------WKF-IDS-HLIICDNANGLHKVS-EDG--VEN 138 (360)
Q Consensus 80 ~Pe~i~~d~~G~-l~v~~~~G~I~~~~--~g~~--~-~----------~~~-~~g-~L~v~~~~~gl~~~~-~~g--~~~ 138 (360)
...++++.++|. |++++.+|.|..++ +++. . . +.. +++ .|++++.++.+..++ .++ ...
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~ 178 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ 178 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeee
Confidence 456788888876 55666889888888 3331 1 1 111 233 466666556677777 555 333
Q ss_pred EeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCC
Q 018144 139 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDE 218 (360)
Q Consensus 139 l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg 218 (360)
+. ... ..+..++++++|...++ +...|.|..+|..+++.............+++++++
T Consensus 179 ~~-~~~----~~i~~~~~~~~~~~l~~-----------------~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~ 236 (337)
T 1gxr_A 179 FQ-GHT----DGASCIDISNDGTKLWT-----------------GGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTG 236 (337)
T ss_dssp EC-CCS----SCEEEEEECTTSSEEEE-----------------EETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTS
T ss_pred ee-ccc----CceEEEEECCCCCEEEE-----------------EecCCcEEEEECCCCceEeeecCCCceEEEEECCCC
Confidence 31 111 24678899999976664 223578999998877765544444456789999999
Q ss_pred CEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccc
Q 018144 219 DYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLF 298 (360)
Q Consensus 219 ~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 298 (360)
+.++++.. .+.|..++.+..+. ..+. ...+....+.++++|++.++...
T Consensus 237 ~~l~~~~~-~~~i~~~~~~~~~~---~~~~-~~~~~v~~~~~~~~~~~l~~~~~-------------------------- 285 (337)
T 1gxr_A 237 EWLAVGME-SSNVEVLHVNKPDK---YQLH-LHESCVLSLKFAYCGKWFVSTGK-------------------------- 285 (337)
T ss_dssp SEEEEEET-TSCEEEEETTSSCE---EEEC-CCSSCEEEEEECTTSSEEEEEET--------------------------
T ss_pred CEEEEEcC-CCcEEEEECCCCCe---EEEc-CCccceeEEEECCCCCEEEEecC--------------------------
Confidence 97776664 56799998865321 1221 23344677889999986665544
Q ss_pred cccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEE-CC-EEEEEeCCCCeEEEEeC
Q 018144 299 SQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DN-HLYVISLTSNFIGKVQL 359 (360)
Q Consensus 299 ~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~g-~Lylgs~~~~~i~~~~l 359 (360)
.+.|..++. .++.+...... ..++++... ++ .|+.++ ....|..+++
T Consensus 286 --------dg~i~~~~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~-~dg~i~iw~~ 335 (337)
T 1gxr_A 286 --------DNLLNAWRTPYGASIFQSKES-----SSVLSCDISVDDKYIVTGS-GDKKATVYEV 335 (337)
T ss_dssp --------TSEEEEEETTTCCEEEEEECS-----SCEEEEEECTTSCEEEEEE-TTSCEEEEEE
T ss_pred --------CCcEEEEECCCCeEEEEecCC-----CcEEEEEECCCCCEEEEec-CCCeEEEEEE
Confidence 256777774 56655444321 246666665 34 455444 5566666653
No 123
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.60 E-value=1.4e-05 Score=75.73 Aligned_cols=178 Identities=9% Similarity=0.063 Sum_probs=108.1
Q ss_pred CCCEEEEe-cCCeEEEEE-C-C----eee-EE------------------EecCCeEEEEeCC-------CcEEEEc-CC
Q 018144 89 NGVIYTAT-RDGWIKRLQ-D-G----TWV-NW------------------KFIDSHLIICDNA-------NGLHKVS-ED 134 (360)
Q Consensus 89 ~G~l~v~~-~~G~I~~~~-~-g----~~~-~~------------------~~~~g~L~v~~~~-------~gl~~~~-~~ 134 (360)
...||+.. .+++|+.+| . . ++. .+ ..++| |||+..+ ++++.+| ++
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T 173 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYS 173 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTT
T ss_pred CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCC
Confidence 45788888 788999999 2 2 221 11 11345 9987644 3788898 55
Q ss_pred C--eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCC-----ccceecccccCCccEEEEEcCCCCeEEEEeCC--
Q 018144 135 G--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLP-----HEYCLDILEGKPHGQLLKYDPSSNITTLVADG-- 205 (360)
Q Consensus 135 g--~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~-----~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-- 205 (360)
+ ...+. ....+..+++++...+++++.++.. |+. ..+..+.+++....+|..||.++++......-
T Consensus 174 ~~v~~~~~--~~~~~~~~~Yd~~~~p~~~~mvsS~---wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~ 248 (462)
T 2ece_A 174 FEPLGKWE--IDRGDQYLAYDFWWNLPNEVLVSSE---WAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE 248 (462)
T ss_dssp CCEEEECC--SBCTTCCCCCCEEEETTTTEEEECB---CCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT
T ss_pred CeEEEEEc--cCCCCccccceEEECCCCCEEEEcc---CcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC
Confidence 5 33332 1222334677888899997666531 110 01111111123467899999987765443221
Q ss_pred -CcCcceEEE--ecCCCEEEEEeC-----CCCEEEEEEecCCcCcceeee--cc-----CC----------CCCCceeEE
Q 018144 206 -FYFANGVAL--SRDEDYVVVCES-----WKFRCRKYWLKGERKGKLETF--AE-----NL----------PGAPDNINL 260 (360)
Q Consensus 206 -l~~pngia~--~~dg~~l~v~~t-----~~~~i~~~~~~g~~~~~~~~~--~~-----~~----------~g~pd~i~~ 260 (360)
...|.++.+ +|+++++|++.. ..+.|.+|..++......+++ .. .+ +..|.+|.+
T Consensus 249 ~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~l 328 (462)
T 2ece_A 249 ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDI 328 (462)
T ss_dssp TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEE
T ss_pred CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEE
Confidence 246778877 999999999987 777888776654322111111 00 11 256899999
Q ss_pred cCCCC-EEEEEec
Q 018144 261 APDGT-FWIAIIK 272 (360)
Q Consensus 261 d~~G~-lwva~~~ 272 (360)
++||+ |||++..
T Consensus 329 S~DGrfLYVSnrg 341 (462)
T 2ece_A 329 SLDDKFLYLSLWG 341 (462)
T ss_dssp CTTSCEEEEEETT
T ss_pred CCCCCEEEEEeCC
Confidence 99995 9999887
No 124
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.56 E-value=4.7e-05 Score=75.18 Aligned_cols=229 Identities=13% Similarity=0.096 Sum_probs=135.5
Q ss_pred CCcceEEEcCCC-CEEEEecCCeEEEEE-C-C--ee----------eEEEec-----CC-eEEEEeCC-CcEEEEc-CCC
Q 018144 79 NHPEDASMDKNG-VIYTATRDGWIKRLQ-D-G--TW----------VNWKFI-----DS-HLIICDNA-NGLHKVS-EDG 135 (360)
Q Consensus 79 ~~Pe~i~~d~~G-~l~v~~~~G~I~~~~-~-g--~~----------~~~~~~-----~g-~L~v~~~~-~gl~~~~-~~g 135 (360)
..|+++++++|| .+|+++.+|.|..+| . . +. ..+... +| .+|+++.. +.+..+| .+.
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 478999999987 579998889999998 4 2 11 122333 34 68988865 4566777 555
Q ss_pred --eEEEeec---cCCc---cccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE--EeCC
Q 018144 136 --VENFLSY---VNGS---KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL--VADG 205 (360)
Q Consensus 136 --~~~l~~~---~~~~---~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~--~~~~ 205 (360)
+..+... .++. +...+..+...+++..|+.. ....|.|..+|..+.+... ....
T Consensus 277 ~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~----------------~~~~g~v~~vd~~~~~~~~v~~i~~ 340 (567)
T 1qks_A 277 EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN----------------VKETGKILLVDYTDLNNLKTTEISA 340 (567)
T ss_dssp CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE----------------ETTTTEEEEEETTCSSEEEEEEEEC
T ss_pred cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEE----------------ecCCCeEEEEecCCCccceeeeeec
Confidence 4433321 1110 01133466666766544422 2346789999876542211 1123
Q ss_pred CcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCC-ceeE-EcCC-CCEEEEEecCchhHHHHhh
Q 018144 206 FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAP-DNIN-LAPD-GTFWIAIIKLDARRMKILN 282 (360)
Q Consensus 206 l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~p-d~i~-~d~~-G~lwva~~~~~~~~~~~~~ 282 (360)
-.++.++.+++||+++|++....++|..+|.+..+....-......| .| .+.. ++++ |.+|++....
T Consensus 341 ~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~P-hpg~g~~~~~p~~g~v~~t~~~g--------- 410 (567)
T 1qks_A 341 ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTP-HPGRGANFVHPTFGPVWATSHMG--------- 410 (567)
T ss_dssp CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSB-CCTTCEEEEETTTEEEEEEEBSS---------
T ss_pred cccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCC-CCccceeeECCCCCcEEEeCCCC---------
Confidence 45788999999999999999888999999986543211111101111 22 2444 4665 6799876431
Q ss_pred cchhHHHHHHhCCccccccccCCCceEEEEECCC--------CcEEEEEeCCCCCcccceeeEEEECCEEEEEeC-C---
Q 018144 283 SSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED--------GTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISL-T--- 350 (360)
Q Consensus 283 ~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~--------g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~-~--- 350 (360)
.+.|..++.+ .++++.+....+. +.......++.+||+.+- .
T Consensus 411 ------------------------~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g--~~~i~~~p~~~~l~v~~~~~~~~ 464 (567)
T 1qks_A 411 ------------------------DDSVALIGTDPEGHPDNAWKILDSFPALGGG--SLFIKTHPNSQYLYVDATLNPEA 464 (567)
T ss_dssp ------------------------SSEEEEEECCTTTCTTTBTSEEEEEECSCSC--CCCEECCTTCSEEEEECTTCSSH
T ss_pred ------------------------CCeEEEecCCCCCCccccCEEEEEEecCCCC--CEEEEeCCCCCeEEEecCCCCCc
Confidence 2467777653 4677777654221 111111223478999884 3
Q ss_pred --CCeEEEEeC
Q 018144 351 --SNFIGKVQL 359 (360)
Q Consensus 351 --~~~i~~~~l 359 (360)
++.|+++++
T Consensus 465 ~~~~~v~v~d~ 475 (567)
T 1qks_A 465 EISGSVAVFDI 475 (567)
T ss_dssp HHHTCEEEEEG
T ss_pred ccCceEEEEEC
Confidence 358999875
No 125
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.54 E-value=2.1e-05 Score=71.34 Aligned_cols=203 Identities=15% Similarity=0.141 Sum_probs=126.6
Q ss_pred cceEEEcCCCCEEEEe-cC-------------CeEEEEE-CCee-e--------EEEecCCeEEEEe---C-CCcEEEEc
Q 018144 81 PEDASMDKNGVIYTAT-RD-------------GWIKRLQ-DGTW-V--------NWKFIDSHLIICD---N-ANGLHKVS 132 (360)
Q Consensus 81 Pe~i~~d~~G~l~v~~-~~-------------G~I~~~~-~g~~-~--------~~~~~~g~L~v~~---~-~~gl~~~~ 132 (360)
+..|.++ ++.||... .+ ..|++++ +|.. + .+...++.||.++ . ...|++++
T Consensus 57 ~~~i~~~-g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~ 135 (302)
T 3s25_A 57 AMYINAD-KNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDPCIYASLIGNYIYYLHYDTQTATSLYRIR 135 (302)
T ss_dssp EEEEEEC-SSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSCEEEEEEETTEEEEEEESSSSCEEEEEEE
T ss_pred eeeEEEc-CCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCCccEEEEeCCEEEEEeecCCCCceEEEEE
Confidence 4455554 55777765 32 4799999 5531 1 2344578899887 2 24688888
Q ss_pred CCC--eEEEeeccCCccccccccEEEcCCC-cEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCc
Q 018144 133 EDG--VENFLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA 209 (360)
Q Consensus 133 ~~g--~~~l~~~~~~~~~~~~n~l~~d~dG-~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~p 209 (360)
-+| .+.+..... ..++.+| .||+|+.+ ...|++.+.+++..+.+..+ +
T Consensus 136 ~dGs~~~~lt~~~~---------~~~~~~g~~iy~t~~g-----------------~~~Iy~~~l~g~~~~~l~~~---~ 186 (302)
T 3s25_A 136 IDGEEKKKIKNHYL---------FTCNTSDRYFYYNNPK-----------------NGQLYRYDTASQSEALFYDC---N 186 (302)
T ss_dssp TTSCCCEEEESSCC---------CCSEEETTEEEEECTT-----------------TCCEEEEETTTTEEEEEECS---C
T ss_pred CCCCCeEEEeCCCc---------eEeeEECCEEEEEeCC-----------------CceEEEEECCCCCEEEEeCC---C
Confidence 444 555543211 1223444 79998652 34799999887766655443 2
Q ss_pred ceEEEecCCCEEEEEeCCC-CEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCC-CEEEEEecCchhHHHHhhcchhH
Q 018144 210 NGVALSRDEDYVVVCESWK-FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDG-TFWIAIIKLDARRMKILNSSKLI 287 (360)
Q Consensus 210 ngia~~~dg~~l~v~~t~~-~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G-~lwva~~~~~~~~~~~~~~~~~~ 287 (360)
..+.+.|+++.+|+++... .+|.+.+++|.. .+++.+. ..| .++++| .||.+....
T Consensus 187 ~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~---~~~Lt~~--~~~---~~~~~g~~Iy~~~~~~-------------- 244 (302)
T 3s25_A 187 CYKPVVLDDTNVYYMDVNRDNAIVHVNINNPN---PVVLTEA--NIE---HYNVYGSLIFYQRGGD-------------- 244 (302)
T ss_dssp EEEEEEEETTEEEEEEGGGTTEEEEECSSSCC---CEECSCS--CEE---EEEEETTEEEEEECSS--------------
T ss_pred ccceeeecCCEEEEEEcCCCcEEEEEECCCCC---eEEEeCC--Ccc---eEEECCCEEEEEECCC--------------
Confidence 2245678999999998753 589999998743 3333321 122 255555 465543321
Q ss_pred HHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCCCCeEEEEeCC
Q 018144 288 KHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQLS 360 (360)
Q Consensus 288 r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~~~i~~~~l~ 360 (360)
...|.+++.||...+.+...+ +..+...+++||........|.+++++
T Consensus 245 -------------------~~~i~~~~~DG~~r~~l~~~~------~~~i~i~~d~Iy~td~~~~~i~~~~~d 292 (302)
T 3s25_A 245 -------------------NPALCVVKNDGTGFKELAKGE------FCNINVTSQYVYFTDFVSNKEYCTSTQ 292 (302)
T ss_dssp -------------------SCEEEEEETTSCCCEEEEESC------EEEEEECSSEEEEEETTTCCEEEEESS
T ss_pred -------------------CcEEEEEECCCCccEEeeCCc------cceEEEeCCEEEEEECCCCeEEEEECC
Confidence 257889999987655554322 335667889999999988889888764
No 126
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.53 E-value=3e-05 Score=70.28 Aligned_cols=200 Identities=9% Similarity=0.093 Sum_probs=121.0
Q ss_pred CCCEEEEe--cCCeEEEEE-CCe-ee--------EEEecCCeEEEEeCC--------------CcEEEEcCCC--eEEEe
Q 018144 89 NGVIYTAT--RDGWIKRLQ-DGT-WV--------NWKFIDSHLIICDNA--------------NGLHKVSEDG--VENFL 140 (360)
Q Consensus 89 ~G~l~v~~--~~G~I~~~~-~g~-~~--------~~~~~~g~L~v~~~~--------------~gl~~~~~~g--~~~l~ 140 (360)
++.||+.. .+++||+++ +|. .+ .+...++.||.+... ..|++++.+| .+.+.
T Consensus 25 g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~ 104 (302)
T 3s25_A 25 DGEVFFSNTNDNGRLYAMNIDGSNIHKLSNDTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLD 104 (302)
T ss_dssp TTEEEEEEGGGTTEEEEEETTSCSCEEEEEEEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEE
T ss_pred CCEEEEEeCCCCceEEEEcCCCCCCEEccCCceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEee
Confidence 77899987 468999999 662 22 233446778776543 2577777444 44443
Q ss_pred eccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCE
Q 018144 141 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDY 220 (360)
Q Consensus 141 ~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~ 220 (360)
.. . .+.+.++ ++.||++|.+ ......|++++.++...+.+..... .+++++++.
T Consensus 105 ~~-~------~~~~s~~-g~~Iy~~~~~--------------~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~ 158 (302)
T 3s25_A 105 PD-P------CIYASLI-GNYIYYLHYD--------------TQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRY 158 (302)
T ss_dssp CS-C------EEEEEEE-TTEEEEEEES--------------SSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTE
T ss_pred cC-C------ccEEEEe-CCEEEEEeec--------------CCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCE
Confidence 22 1 1233332 3479998711 0124579999988666666654422 456888999
Q ss_pred EEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCC-CCEEEEEecCchhHHHHhhcchhHHHHHHhCCcccc
Q 018144 221 VVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPD-GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFS 299 (360)
Q Consensus 221 l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~-G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 299 (360)
||+++.+...|++.+++|.. .+.+.+. +..+.+.++ |.||......
T Consensus 159 iy~t~~g~~~Iy~~~l~g~~---~~~l~~~----~~~~~~~P~g~~iy~t~~~~-------------------------- 205 (302)
T 3s25_A 159 FYYNNPKNGQLYRYDTASQS---EALFYDC----NCYKPVVLDDTNVYYMDVNR-------------------------- 205 (302)
T ss_dssp EEEECTTTCCEEEEETTTTE---EEEEECS----CEEEEEEEETTEEEEEEGGG--------------------------
T ss_pred EEEEeCCCceEEEEECCCCC---EEEEeCC----CccceeeecCCEEEEEEcCC--------------------------
Confidence 99999877899999988743 2222221 223445544 4566655441
Q ss_pred ccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEECCEEEEEe-CCCCeEEEEeCC
Q 018144 300 QFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVIS-LTSNFIGKVQLS 360 (360)
Q Consensus 300 ~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs-~~~~~i~~~~l~ 360 (360)
...|.+.+.+|...+.+.+.. ...+...++.||..+ -..+.|.++++|
T Consensus 206 -------~~~I~~~~ldG~~~~~Lt~~~------~~~~~~~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 206 -------DNAIVHVNINNPNPVVLTEAN------IEHYNVYGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp -------TTEEEEECSSSCCCEECSCSC------EEEEEEETTEEEEEECSSSCEEEEEETT
T ss_pred -------CcEEEEEECCCCCeEEEeCCC------cceEEECCCEEEEEECCCCcEEEEEECC
Confidence 137888888887655554311 123555677888763 345777777664
No 127
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.52 E-value=1.4e-05 Score=72.12 Aligned_cols=114 Identities=11% Similarity=0.006 Sum_probs=71.4
Q ss_pred CeEEEEeCC-CcEEEEc-CCC-e-EEEeeccCCccccccccEEEcCCC-cEEEEeCCCCCCCccceecccccCCccEEEE
Q 018144 117 SHLIICDNA-NGLHKVS-EDG-V-ENFLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLK 191 (360)
Q Consensus 117 g~L~v~~~~-~gl~~~~-~~g-~-~~l~~~~~~~~~~~~n~l~~d~dG-~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~ 191 (360)
..+|++... ..+..++ .++ . ..+.....+.....+.+++++++| .+|+++.........+ ....+.|..
T Consensus 46 ~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~------~~~~~~i~v 119 (337)
T 1pby_B 46 RIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHF------EVQPTRVAL 119 (337)
T ss_dssp SEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCE------EECCCEEEE
T ss_pred CEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccc------cccCceEEE
Confidence 368888765 4577788 666 3 333221111111257899999999 6888752100000000 002468999
Q ss_pred EcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCC
Q 018144 192 YDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGE 239 (360)
Q Consensus 192 ~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~ 239 (360)
+|.++++..........++++++++||+.+|+++ +.|..+++++.
T Consensus 120 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~---~~i~~~d~~~~ 164 (337)
T 1pby_B 120 YDAETLSRRKAFEAPRQITMLAWARDGSKLYGLG---RDLHVMDPEAG 164 (337)
T ss_dssp EETTTTEEEEEEECCSSCCCEEECTTSSCEEEES---SSEEEEETTTT
T ss_pred EECCCCcEEEEEeCCCCcceeEECCCCCEEEEeC---CeEEEEECCCC
Confidence 9998887655444445789999999999898883 56999998643
No 128
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.51 E-value=3.3e-05 Score=72.15 Aligned_cols=80 Identities=13% Similarity=0.051 Sum_probs=55.5
Q ss_pred ccccEEEcCCC-cEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe-CC-------CcCcceEEEecCCCE
Q 018144 150 FANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DG-------FYFANGVALSRDEDY 220 (360)
Q Consensus 150 ~~n~l~~d~dG-~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~-~~-------l~~pngia~~~dg~~ 220 (360)
.| ++++++|| .+|+++....-. ..+...+.|..||+.+.+..... .+ ...|.+++++|||++
T Consensus 68 ~p-~i~~spDg~~lyv~n~~~~~~--------~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~ 138 (373)
T 2mad_H 68 LP-NPVAAHSGSEFALASTSFSRI--------AKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNAD 138 (373)
T ss_pred CC-CeEECCCCCEEEEEecccccc--------ccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCE
Confidence 46 99999999 599987431000 00122457889999876654321 11 246899999999999
Q ss_pred EEEEeCC-CCEEEEEEecCC
Q 018144 221 VVVCESW-KFRCRKYWLKGE 239 (360)
Q Consensus 221 l~v~~t~-~~~i~~~~~~g~ 239 (360)
||+++.. .+.|..+| +..
T Consensus 139 l~v~n~~~~~~v~viD-~t~ 157 (373)
T 2mad_H 139 LLFFQFAAGPAVGLVV-QGG 157 (373)
T ss_pred EEEEecCCCCeEEEEE-CCC
Confidence 9999864 57899999 754
No 129
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.51 E-value=0.00021 Score=64.04 Aligned_cols=169 Identities=15% Similarity=0.196 Sum_probs=99.2
Q ss_pred CCcceEEEcCCCCEE-EEecCCeEEEEE--CCeeeE-----------EEe-cCCe-EEEEeCCCcEEEEc-CCC--eEEE
Q 018144 79 NHPEDASMDKNGVIY-TATRDGWIKRLQ--DGTWVN-----------WKF-IDSH-LIICDNANGLHKVS-EDG--VENF 139 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~-v~~~~G~I~~~~--~g~~~~-----------~~~-~~g~-L~v~~~~~gl~~~~-~~g--~~~l 139 (360)
..-.++++.++|... +++.+|.|..++ +++... +.. ++++ |..+..++-+..++ .++ ...+
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 103 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 103 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEE
Confidence 455778888888654 555888888777 443221 111 2344 44444444455566 555 3333
Q ss_pred eeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-CcCcceEEEecCC
Q 018144 140 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVALSRDE 218 (360)
Q Consensus 140 ~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-l~~pngia~~~dg 218 (360)
. ... ..+..+.+.++|++.++ +...+.|..+|..+++....... ......+++++++
T Consensus 104 ~-~~~----~~v~~~~~~~~~~~l~s-----------------~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 161 (312)
T 4ery_A 104 K-GHS----NYVFCCNFNPQSNLIVS-----------------GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 161 (312)
T ss_dssp E-CCS----SCEEEEEECSSSSEEEE-----------------EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred c-CCC----CCEEEEEEcCCCCEEEE-----------------EeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCC
Confidence 2 111 24667888999987775 23356788899877765443332 3345789999999
Q ss_pred CEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 219 DYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 219 ~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
+.++.+.. .+.|..+++...+ ....+..........+.++++|++.++...
T Consensus 162 ~~l~~~~~-d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 212 (312)
T 4ery_A 162 SLIVSSSY-DGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATL 212 (312)
T ss_dssp SEEEEEET-TSCEEEEETTTCC--EEEEECCSSCCCEEEEEECTTSSEEEEEET
T ss_pred CEEEEEeC-CCcEEEEECCCCc--eeeEEeccCCCceEEEEECCCCCEEEEEcC
Confidence 86665554 5678888875321 122222112222345778999986665443
No 130
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.47 E-value=3.9e-05 Score=71.78 Aligned_cols=192 Identities=15% Similarity=0.098 Sum_probs=113.3
Q ss_pred CCcceEEEcCCC-CEEEEec--CCeEEEEE--CCeeeE-EE--------ecCCe-EEEEeCCCcEEEEc-CC-C-eEEEe
Q 018144 79 NHPEDASMDKNG-VIYTATR--DGWIKRLQ--DGTWVN-WK--------FIDSH-LIICDNANGLHKVS-ED-G-VENFL 140 (360)
Q Consensus 79 ~~Pe~i~~d~~G-~l~v~~~--~G~I~~~~--~g~~~~-~~--------~~~g~-L~v~~~~~gl~~~~-~~-g-~~~l~ 140 (360)
..|+.+++++|| .+|+++. ++.|..+| ++++.. +. ..+.+ ++....++.+..++ .+ + +....
T Consensus 137 ~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~ 216 (386)
T 3sjl_D 137 TYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITH 216 (386)
T ss_dssp CCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEE
T ss_pred CCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEee
Confidence 379999999988 4899873 68899999 565432 21 11222 33333345566666 43 5 42211
Q ss_pred e-ccCCccccccccEEE-cCCCcE-EEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC----------Cc
Q 018144 141 S-YVNGSKLRFANDVVE-ASDGSL-YFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG----------FY 207 (360)
Q Consensus 141 ~-~~~~~~~~~~n~l~~-d~dG~l-~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~----------l~ 207 (360)
. .++.......+...+ .++|++ |+| ..|.|+.+|..++..+....- -.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~dG~~~~vs-------------------~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~ 277 (386)
T 3sjl_D 217 TEVFHPEDEFLINHPAYSQKAGRLVWPT-------------------YTGKIHQIDLSSGDAKFLPAVEALTEAERADGW 277 (386)
T ss_dssp CCCCSCTTSCBCSCCEEETTTTEEEEEB-------------------TTSEEEEEECTTSSCEECCCEESSCHHHHHTTE
T ss_pred cceeccccccccccceeEcCCCcEEEEe-------------------CCCEEEEEECCCCcceeecceeccccccccccc
Confidence 1 111111111222344 378875 543 246899999876654332110 11
Q ss_pred Ccc---eEEEecCCCEEEEEeC---------CCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC--EEEEEecC
Q 018144 208 FAN---GVALSRDEDYVVVCES---------WKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT--FWIAIIKL 273 (360)
Q Consensus 208 ~pn---gia~~~dg~~l~v~~t---------~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~--lwva~~~~ 273 (360)
.|. .++++++++.+|++.. ..++|+.+|.+..+.- ..+. ....|.++.+++||. ||+++..
T Consensus 278 ~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~--~~i~--vg~~~~~lavs~D~~~~ly~tn~~- 352 (386)
T 3sjl_D 278 RPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL--AKFE--MGHEIDSINVSQDEKPLLYALSTG- 352 (386)
T ss_dssp EECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE--EEEE--EEEEECEEEECSSSSCEEEEEETT-
T ss_pred cCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEE--EEEE--CCCCcceEEECCCCCeEEEEEcCC-
Confidence 233 4888999999999853 2368999998653321 1111 112478999999995 5665543
Q ss_pred chhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCC
Q 018144 274 DARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPT 327 (360)
Q Consensus 274 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~ 327 (360)
.+.|..+|. .++++..+..+.
T Consensus 353 ---------------------------------~~~VsViD~~t~k~~~~i~~~~ 374 (386)
T 3sjl_D 353 ---------------------------------DKTLYIHDAESGEELRSVNQLG 374 (386)
T ss_dssp ---------------------------------TTEEEEEETTTCCEEEEECCCC
T ss_pred ---------------------------------CCeEEEEECCCCcEEEEecCCC
Confidence 357889995 789998887653
No 131
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.46 E-value=0.00036 Score=63.32 Aligned_cols=217 Identities=15% Similarity=0.112 Sum_probs=126.6
Q ss_pred CCcceEEEcCCCCEEE-EecCCeEEEEE--CCeee-EEE-----------ecCCe-EEEEeCCCcEEEEc-CCC-e-EEE
Q 018144 79 NHPEDASMDKNGVIYT-ATRDGWIKRLQ--DGTWV-NWK-----------FIDSH-LIICDNANGLHKVS-EDG-V-ENF 139 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v-~~~~G~I~~~~--~g~~~-~~~-----------~~~g~-L~v~~~~~gl~~~~-~~g-~-~~l 139 (360)
..-.++++.+++.+.+ ++.+|.|..++ +++.. .+. .++++ |..+.....+..++ .++ . ..+
T Consensus 81 ~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~ 160 (321)
T 3ow8_A 81 LGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL 160 (321)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEE
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEe
Confidence 3455677777776554 44788888888 55322 111 12344 44444344455566 555 2 222
Q ss_pred eeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-CcCcceEEEecCC
Q 018144 140 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVALSRDE 218 (360)
Q Consensus 140 ~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-l~~pngia~~~dg 218 (360)
. . .+ ..+..+++.++|+..++ +...|.|..+|..+++......+ ....+.++++||+
T Consensus 161 ~-~-~~---~~v~~~~~spdg~~las-----------------g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~ 218 (321)
T 3ow8_A 161 D-T-RG---KFILSIAYSPDGKYLAS-----------------GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 218 (321)
T ss_dssp E-C-SS---SCEEEEEECTTSSEEEE-----------------EETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTS
T ss_pred c-C-CC---ceEEEEEECCCCCEEEE-----------------EcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCC
Confidence 1 1 11 24678899999987765 23356788899888876554443 3346899999999
Q ss_pred CEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccc
Q 018144 219 DYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLF 298 (360)
Q Consensus 219 ~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 298 (360)
+.| ++....+.|..+++.... ....+. ...+....+++.++|.+.++...
T Consensus 219 ~~l-~s~s~dg~i~iwd~~~~~--~~~~~~-~h~~~v~~~~~sp~~~~l~s~s~-------------------------- 268 (321)
T 3ow8_A 219 QLL-VTASDDGYIKIYDVQHAN--LAGTLS-GHASWVLNVAFCPDDTHFVSSSS-------------------------- 268 (321)
T ss_dssp CEE-EEECTTSCEEEEETTTCC--EEEEEC-CCSSCEEEEEECTTSSEEEEEET--------------------------
T ss_pred CEE-EEEcCCCeEEEEECCCcc--eeEEEc-CCCCceEEEEECCCCCEEEEEeC--------------------------
Confidence 855 444456678888875422 112221 22234567888999987665544
Q ss_pred cccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCCeEEEEeC
Q 018144 299 SQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 299 ~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~~~l 359 (360)
.+.|..+|. .++.+..+....+ .+.++... ++...+..-....|..+++
T Consensus 269 --------D~~v~iwd~~~~~~~~~~~~h~~----~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 269 --------DKSVKVWDVGTRTCVHTFFDHQD----QVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp --------TSCEEEEETTTTEEEEEECCCSS----CEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred --------CCcEEEEeCCCCEEEEEEcCCCC----cEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 245666664 5677777654333 46677776 3444444444555665543
No 132
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.45 E-value=2.8e-05 Score=72.19 Aligned_cols=76 Identities=12% Similarity=0.149 Sum_probs=54.4
Q ss_pred ccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC
Q 018144 186 HGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT 265 (360)
Q Consensus 186 ~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~ 265 (360)
.+.|..||.++++......... |.++++++||++||++.. +.|..||.+..++.....+. .....|.+++++++|+
T Consensus 285 ~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~-~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 285 AAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTIE-GAAEASLQVQFHPVGG 360 (361)
T ss_dssp CSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEET-TSCSSEEEEEECCCSC
T ss_pred CceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEec-cCCCCcEEEEecCCCC
Confidence 3579999999888765443334 999999999999998885 78999997643112222221 2334699999999985
No 133
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.43 E-value=0.00036 Score=65.07 Aligned_cols=231 Identities=10% Similarity=0.022 Sum_probs=124.5
Q ss_pred EecCCCCCCcceEEEcCCC-CEEEEec----------CCeEEEEE--CCeeeE------------------EE--ecCCe
Q 018144 72 KVGEGSVNHPEDASMDKNG-VIYTATR----------DGWIKRLQ--DGTWVN------------------WK--FIDSH 118 (360)
Q Consensus 72 ~~~~~~~~~Pe~i~~d~~G-~l~v~~~----------~G~I~~~~--~g~~~~------------------~~--~~~g~ 118 (360)
+++.| ..| ++++.+|| .+|+++. ++.|..+| +++... +. ..+..
T Consensus 62 ~i~~g--~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~ 138 (373)
T 2mad_H 62 HVNGG--FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNAD 138 (373)
T ss_pred EecCC--CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCE
Confidence 45544 478 99999987 5888862 45688888 332211 11 12456
Q ss_pred EEEEeCC--CcEEEEcCCCeEEEeeccCCccccccccEEEcCCC-cEEEEeCCCCCCCccceecccccCCccEEEEEcCC
Q 018144 119 LIICDNA--NGLHKVSEDGVENFLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS 195 (360)
Q Consensus 119 L~v~~~~--~gl~~~~~~g~~~l~~~~~~~~~~~~n~l~~d~dG-~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 195 (360)
||+++.. +.+..+| ...+......+ .+.++.+.++| +.|++.. ..|.+..+|.
T Consensus 139 l~v~n~~~~~~v~viD-~t~~~~~~~i~-----~~~~~~~~~~~~~~~~~~~-----------------~dg~~~~vd~- 194 (373)
T 2mad_H 139 LLFFQFAAGPAVGLVV-QGGSSDDQLLS-----SPTCYHIHPGAPSTFYLLC-----------------AQGGLAKTDH- 194 (373)
T ss_pred EEEEecCCCCeEEEEE-CCCCEEeEEcC-----CCceEEEEeCCCceEEEEc-----------------CCCCEEEEEC-
Confidence 8888743 4577777 43111111011 11223344444 5666532 3567888887
Q ss_pred CCeEEEEeC-----CCcCc--ceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeec---c---CCCCCCce---eE
Q 018144 196 SNITTLVAD-----GFYFA--NGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFA---E---NLPGAPDN---IN 259 (360)
Q Consensus 196 tg~~~~~~~-----~l~~p--ngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~---~---~~~g~pd~---i~ 259 (360)
+++...... ....| ...++.+++..+|+... .+.++.++..+........+. . ...-.|++ +.
T Consensus 195 ~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~ 273 (373)
T 2mad_H 195 AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVY-SGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVA 273 (373)
T ss_pred CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcC-CceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEE
Confidence 665542111 01111 22345566555555553 467998888643211111111 0 01113666 78
Q ss_pred EcCCC-CEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEeCCCCCcccceeeE
Q 018144 260 LAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSG 337 (360)
Q Consensus 260 ~d~~G-~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~g~~~~~~t~~ 337 (360)
++++| .+||+....... - .....+.|..+|.+ ++++..+..+. .+.++
T Consensus 274 ~s~d~~~lyV~~~~~~~~----~---------------------~~~~~~~V~VID~~t~~vv~~i~~g~-----~p~~i 323 (373)
T 2mad_H 274 YLKSSDGIYLLTSEQSAW----K---------------------LHAAAKEVTSVTGLVGQTSSQISLGH-----DVDAI 323 (373)
T ss_pred ECCCCCEEEEEeccCCcc----c---------------------ccCCCCeEEEEECCCCEEEEEEECCC-----CcCeE
Confidence 88887 599987531000 0 00013579999975 67778875433 23444
Q ss_pred EEE--CC-EEEEEeCCCCeEEEEeCC
Q 018144 338 LQV--DN-HLYVISLTSNFIGKVQLS 360 (360)
Q Consensus 338 ~~~--~g-~Lylgs~~~~~i~~~~l~ 360 (360)
... +. .||+++..++.|.+++++
T Consensus 324 ~~s~Dg~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 324 SVAQDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred EECCCCCeEEEEEcCCCCeEEEEECC
Confidence 443 45 588877789999999863
No 134
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.40 E-value=3.5e-05 Score=75.47 Aligned_cols=195 Identities=11% Similarity=0.055 Sum_probs=115.0
Q ss_pred EecCCCCCCcceEEEcC--CC-CEEEEe-cCCeEEEEE--CCee------------eEEE----ecCCeEEEEeC-----
Q 018144 72 KVGEGSVNHPEDASMDK--NG-VIYTAT-RDGWIKRLQ--DGTW------------VNWK----FIDSHLIICDN----- 124 (360)
Q Consensus 72 ~~~~~~~~~Pe~i~~d~--~G-~l~v~~-~~G~I~~~~--~g~~------------~~~~----~~~g~L~v~~~----- 124 (360)
.+.-|....|..-..|. || .+|+.+ .+++|.+++ +.+. +.+. ..++.+|+++.
T Consensus 81 ~~~~gd~hh~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~ 160 (595)
T 1fwx_A 81 IHDNGDLHHVHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPL 160 (595)
T ss_dssp SCCCCCBCCEEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEES
T ss_pred ecccCCCCccccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEeccccccc
Confidence 35456566765444442 43 789988 677899998 3331 1222 23456888741
Q ss_pred ------------CC-cEEEEc-CCC--eEEEeeccCCccccccccEEEcCCC-cEEEEeCCCCCC---------Cccce-
Q 018144 125 ------------AN-GLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYL---------PHEYC- 177 (360)
Q Consensus 125 ------------~~-gl~~~~-~~g--~~~l~~~~~~~~~~~~n~l~~d~dG-~l~vtd~~~~~~---------~~~~~- 177 (360)
+. -+..+| .+. ...+. ..+ .|.++++++|| .+|+|...+.-+ ..++.
T Consensus 161 ~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~--Vgg----~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~ 234 (595)
T 1fwx_A 161 VNDGTNMEDVANYVNVFTAVDADKWEVAWQVL--VSG----NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIV 234 (595)
T ss_dssp SCSSSSTTCGGGEEEEEEEEETTTTEEEEEEE--ESS----CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEE
T ss_pred CCCCcccccccccCceEEEEECCCCeEEEEEE--eCC----CccceEECCCCCEEEEEecCcccCcchhhccccccceEE
Confidence 12 233455 333 11121 112 47899999998 588877543221 00110
Q ss_pred -------eccc-cc--CCccEEEEEcCCC--CeE-EEEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCc----
Q 018144 178 -------LDIL-EG--KPHGQLLKYDPSS--NIT-TLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGER---- 240 (360)
Q Consensus 178 -------~~~~-~~--~~~g~l~~~d~~t--g~~-~~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~---- 240 (360)
.... .+ ...++|-.+|..+ ++. ......-..|.|+.++|||+++|+++...+.|..|+.+..+
T Consensus 235 V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~ 314 (595)
T 1fwx_A 235 VFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFY 314 (595)
T ss_dssp EEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHH
T ss_pred EeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccc
Confidence 0000 01 0124588999886 433 33333446899999999999999999999999999986321
Q ss_pred --Cc-ceeeeccCCC-CCCceeEEcCCCCEEEEEec
Q 018144 241 --KG-KLETFAENLP-GAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 241 --~~-~~~~~~~~~~-g~pd~i~~d~~G~lwva~~~ 272 (360)
+. ...+..+... ..|-.+++|++|++|+++.-
T Consensus 315 ~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~l 350 (595)
T 1fwx_A 315 ENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFL 350 (595)
T ss_dssp SCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETT
T ss_pred cccCcccceEEEcCCCCCcceEEECCCCeEEEEEec
Confidence 11 1112222222 25999999999999998865
No 135
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.38 E-value=5.7e-06 Score=78.59 Aligned_cols=121 Identities=13% Similarity=0.012 Sum_probs=82.2
Q ss_pred CCC-cEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeC---------C
Q 018144 158 SDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCES---------W 227 (360)
Q Consensus 158 ~dG-~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t---------~ 227 (360)
+++ ++|+++.... .. .+.|..||+.++++.........| |+++++||+.+||+++ .
T Consensus 82 ~~~~~vyV~n~~~~------------~~-~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~ 147 (426)
T 3c75_H 82 PDARRVYIQDPAHF------------AA-ITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKR 147 (426)
T ss_dssp CCTTEEEEEECTTT------------CS-SEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEE
T ss_pred CCCCEEEEECCCcC------------CC-CCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCC
Confidence 344 6999986410 00 168999999999886554444578 9999999999999986 2
Q ss_pred CCEEEEEEecCCcCcceeeecc-C----CCCCCceeEEcCCC-CEEEEEecCchhHHHHhhcchhHHHHHHhCCcccccc
Q 018144 228 KFRCRKYWLKGERKGKLETFAE-N----LPGAPDNINLAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQF 301 (360)
Q Consensus 228 ~~~i~~~~~~g~~~~~~~~~~~-~----~~g~pd~i~~d~~G-~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 301 (360)
.+.|..||....+.. .++-.. . ....|.++++++|| .+||+....
T Consensus 148 ~~~VsviD~~t~~vv-~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~---------------------------- 198 (426)
T 3c75_H 148 TDYVEVFDPVTFLPI-ADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP---------------------------- 198 (426)
T ss_dssp EEEEEEECTTTCCEE-EEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS----------------------------
T ss_pred CCEEEEEECCCCcEE-EEEECCCccccccCCCcceEEEcCCCCEEEEEecCC----------------------------
Confidence 456899987543221 111111 0 01358999999999 599987531
Q ss_pred ccCCCceEEEEECC-CCcEEEEEeCC
Q 018144 302 ITLGGGAHLIHVAE-DGTIIRNLVDP 326 (360)
Q Consensus 302 ~~~~~~~~v~~~~~-~g~~~~~~~~~ 326 (360)
.+.|..+|. .++++..+..+
T Consensus 199 -----~~~VsVID~~t~kvv~~I~v~ 219 (426)
T 3c75_H 199 -----APAVGVVDLEGKTFDRMLDVP 219 (426)
T ss_dssp -----SCEEEEEETTTTEEEEEEECC
T ss_pred -----CCeEEEEECCCCeEEEEEEcC
Confidence 257889996 56777777654
No 136
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.38 E-value=0.00022 Score=69.63 Aligned_cols=212 Identities=12% Similarity=0.155 Sum_probs=125.6
Q ss_pred CCcceEEEcCCCCEE-EEecCCeEEEEE-CCeee-----------EEEe-cCCe-EEEEeCCCcEEEEcCCC--eEEEee
Q 018144 79 NHPEDASMDKNGVIY-TATRDGWIKRLQ-DGTWV-----------NWKF-IDSH-LIICDNANGLHKVSEDG--VENFLS 141 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~-v~~~~G~I~~~~-~g~~~-----------~~~~-~~g~-L~v~~~~~gl~~~~~~g--~~~l~~ 141 (360)
....++++.++|... +++.+|.|..++ +++.. .+.. ++|+ |..+..++.+..++.++ ...+..
T Consensus 345 ~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~ 424 (577)
T 2ymu_A 345 SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTG 424 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEEC
T ss_pred CCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecC
Confidence 345678888887654 455788887777 55321 1222 2344 44444444455555544 433321
Q ss_pred ccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEE
Q 018144 142 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYV 221 (360)
Q Consensus 142 ~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l 221 (360)
. . ..+.++++.+|+...++- ...+.|..+|.+......+.........++++||++.|
T Consensus 425 ~-~----~~v~~~~~s~d~~~l~~~-----------------~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~l 482 (577)
T 2ymu_A 425 H-S----SSVWGVAFSPDDQTIASA-----------------SDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTI 482 (577)
T ss_dssp C-S----SCEEEEEECTTSSEEEEE-----------------ETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEE
T ss_pred C-C----CCeEEEEECCCCCEEEEE-----------------cCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 1 1 246788999999876652 23567888887644444444334456789999999866
Q ss_pred EEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCcccccc
Q 018144 222 VVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQF 301 (360)
Q Consensus 222 ~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 301 (360)
..+. ..+.|..++.++.. ...+. ........+++.++|++.++...
T Consensus 483 as~~-~d~~i~iw~~~~~~---~~~~~-~h~~~v~~l~~s~dg~~l~s~~~----------------------------- 528 (577)
T 2ymu_A 483 ASAS-DDKTVKLWNRNGQL---LQTLT-GHSSSVRGVAFSPDGQTIASASD----------------------------- 528 (577)
T ss_dssp EEEE-TTSEEEEEETTSCE---EEEEE-CCSSCEEEEEECTTSSCEEEEET-----------------------------
T ss_pred EEEe-CCCEEEEEcCCCCE---EEEEe-CCCCCEEEEEEcCCCCEEEEEEC-----------------------------
Confidence 5554 45678878765432 22222 22234567889999986655443
Q ss_pred ccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEEE-CCE-EEEEeCCCCeEEE
Q 018144 302 ITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNH-LYVISLTSNFIGK 356 (360)
Q Consensus 302 ~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~-Lylgs~~~~~i~~ 356 (360)
.+.|..+|.+|+.+..+....+ .++++.+. +|+ |.-++. ...|.+
T Consensus 529 -----dg~v~lwd~~~~~~~~~~~h~~----~v~~~~fs~dg~~l~s~~~-D~~i~~ 575 (577)
T 2ymu_A 529 -----DKTVKLWNRNGQLLQTLTGHSS----SVWGVAFSPDGQTIASASS-DKTVKL 575 (577)
T ss_dssp -----TSEEEEECTTSCEEEEEECCSS----CEEEEEECTTSSCEEEEET-TSCEEE
T ss_pred -----cCEEEEEeCCCCEEEEEcCCCC----CEEEEEEcCCCCEEEEEeC-CCEEEE
Confidence 2567778888998888765333 57777776 444 444443 333443
No 137
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.37 E-value=0.00045 Score=61.87 Aligned_cols=169 Identities=14% Similarity=0.111 Sum_probs=100.5
Q ss_pred CCcceEEEcCCCCEEEEecCCeEEEEE--CCe----eeE------------EEe-cCC-eEEEEeCCCcEEEEc-CCC-e
Q 018144 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DGT----WVN------------WKF-IDS-HLIICDNANGLHKVS-EDG-V 136 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v~~~~G~I~~~~--~g~----~~~------------~~~-~~g-~L~v~~~~~gl~~~~-~~g-~ 136 (360)
....++++.++|.+.++..+|.|..++ +++ ... +.. +++ .|+++..++.+..++ .++ .
T Consensus 52 ~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 131 (337)
T 1gxr_A 52 EVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP 131 (337)
T ss_dssp SCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--
T ss_pred CceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCc
Confidence 456688899888766655589888888 321 111 111 233 355655555566666 444 2
Q ss_pred EEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-CcCcceEEEe
Q 018144 137 ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVALS 215 (360)
Q Consensus 137 ~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-l~~pngia~~ 215 (360)
...... .+. ...+..+++.++|+..++ +...|.|..+|..+++....... ......++++
T Consensus 132 ~~~~~~-~~~-~~~i~~~~~~~~~~~l~~-----------------~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~ 192 (337)
T 1gxr_A 132 RIKAEL-TSS-APACYALAISPDSKVCFS-----------------CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 192 (337)
T ss_dssp EEEEEE-ECS-SSCEEEEEECTTSSEEEE-----------------EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred ceeeec-ccC-CCceEEEEECCCCCEEEE-----------------EeCCCcEEEEeCCCCceeeeeecccCceEEEEEC
Confidence 222111 111 124678889999876654 22356788999887766544332 3456789999
Q ss_pred cCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEe
Q 018144 216 RDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 271 (360)
Q Consensus 216 ~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 271 (360)
++++.++.+.. .+.|..+++...+. ...+ ...+....+.++++|++.+...
T Consensus 193 ~~~~~l~~~~~-dg~i~~~d~~~~~~--~~~~--~~~~~v~~~~~s~~~~~l~~~~ 243 (337)
T 1gxr_A 193 NDGTKLWTGGL-DNTVRSWDLREGRQ--LQQH--DFTSQIFSLGYCPTGEWLAVGM 243 (337)
T ss_dssp TTSSEEEEEET-TSEEEEEETTTTEE--EEEE--ECSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCEEEEEec-CCcEEEEECCCCce--Eeee--cCCCceEEEEECCCCCEEEEEc
Confidence 99986766654 57899998764321 1112 1233456788888887555443
No 138
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.37 E-value=1e-05 Score=75.68 Aligned_cols=123 Identities=15% Similarity=0.082 Sum_probs=82.2
Q ss_pred EcCCC-cEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCC-------
Q 018144 156 EASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESW------- 227 (360)
Q Consensus 156 ~d~dG-~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~------- 227 (360)
..++| ++|++|... ....+.|+.+|..++++.........|+ ++++|||+.+|++++.
T Consensus 40 ~~pd~~~vyV~~~~~-------------~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G 105 (386)
T 3sjl_D 40 PAPDARRVYVNDPAH-------------FAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARG 105 (386)
T ss_dssp CCCCTTEEEEEECGG-------------GCSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEE
T ss_pred cCCCCCEEEEEcCcc-------------cCCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccC
Confidence 35677 699998631 1124689999999988765444445575 9999999999999852
Q ss_pred --CCEEEEEEecCCcCcceeeeccC-C----CCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchhHHHHHHhCCcccc
Q 018144 228 --KFRCRKYWLKGERKGKLETFAEN-L----PGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFS 299 (360)
Q Consensus 228 --~~~i~~~~~~g~~~~~~~~~~~~-~----~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 299 (360)
.+.|.+||....+.. .++-... . ...|.++++++||+ +||++...
T Consensus 106 ~~~~~VsviD~~t~~v~-~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~-------------------------- 158 (386)
T 3sjl_D 106 ERTDYVEVFDPVTLLPT-ADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP-------------------------- 158 (386)
T ss_dssp EEEEEEEEECTTTCCEE-EEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS--------------------------
T ss_pred CCCCEEEEEECCCCeEE-EEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC--------------------------
Confidence 345888887543211 1111100 0 12699999999995 89987531
Q ss_pred ccccCCCceEEEEECC-CCcEEEEEeCC
Q 018144 300 QFITLGGGAHLIHVAE-DGTIIRNLVDP 326 (360)
Q Consensus 300 ~~~~~~~~~~v~~~~~-~g~~~~~~~~~ 326 (360)
.+.|..+|. .++++..+..+
T Consensus 159 -------~~~VsVID~~t~~vv~tI~v~ 179 (386)
T 3sjl_D 159 -------APAVGVVDLEGKAFKRMLDVP 179 (386)
T ss_dssp -------SCEEEEEETTTTEEEEEEECC
T ss_pred -------CCeEEEEECCCCcEEEEEECC
Confidence 257888885 57777777654
No 139
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.36 E-value=0.00033 Score=64.87 Aligned_cols=44 Identities=7% Similarity=-0.006 Sum_probs=30.7
Q ss_pred eEEEEECC-CCcEEEEEeCCCCCcccceeeEEEE--CCEEEEEeCCCCeEEEEeC
Q 018144 308 AHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 308 ~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~--~g~Lylgs~~~~~i~~~~l 359 (360)
..|..+|. .++++..+.... +.++... +.+||+++. +.|.++++
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~------p~~ia~spdg~~l~v~n~--~~v~v~D~ 332 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD------ALSMTIDQQRNLMLTLDG--GNVNVYDI 332 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT------CCEEEEETTTTEEEEECS--SCEEEEEC
T ss_pred ceEEEEECCCCcEEEEEecCC------eeEEEECCCCCEEEEeCC--CeEEEEEC
Confidence 47888886 577777776432 4455554 478998874 88998875
No 140
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.34 E-value=0.00053 Score=62.52 Aligned_cols=220 Identities=9% Similarity=0.018 Sum_probs=123.2
Q ss_pred CcceEEEcCCCCEE-EEecCCeEEEEE--CCe---eeEEE----------e-cCC-eEEEEeCCCcEEEEc-CCC-eEEE
Q 018144 80 HPEDASMDKNGVIY-TATRDGWIKRLQ--DGT---WVNWK----------F-IDS-HLIICDNANGLHKVS-EDG-VENF 139 (360)
Q Consensus 80 ~Pe~i~~d~~G~l~-v~~~~G~I~~~~--~g~---~~~~~----------~-~~g-~L~v~~~~~gl~~~~-~~g-~~~l 139 (360)
.-.++++.++|.+. +++.+|.|..++ +++ ...+. . +++ .|+.+..++.+..++ .++ ....
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 89 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT 89 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeee
Confidence 44677888888655 455888888887 553 22221 1 233 355555444565666 455 3222
Q ss_pred eeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCe----EEEEeCC-CcCcceEEE
Q 018144 140 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI----TTLVADG-FYFANGVAL 214 (360)
Q Consensus 140 ~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~----~~~~~~~-l~~pngia~ 214 (360)
...... ...+..+++.++|+..++- ...+.|..+|..+++ ....... ......+++
T Consensus 90 ~~~~~~--~~~v~~~~~~~~~~~l~~~-----------------~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~ 150 (372)
T 1k8k_C 90 LVILRI--NRAARCVRWAPNEKKFAVG-----------------SGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDW 150 (372)
T ss_dssp EECCCC--SSCEEEEEECTTSSEEEEE-----------------ETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEE
T ss_pred EEeecC--CCceeEEEECCCCCEEEEE-----------------eCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEE
Confidence 111111 1346788999999766642 223456555554443 2222222 345678999
Q ss_pred ecCCCEEEEEeCCCCEEEEEEecCCc---------------Ccc-eeeeccCCCCCCceeEEcCCCCEEEEEecCchhHH
Q 018144 215 SRDEDYVVVCESWKFRCRKYWLKGER---------------KGK-LETFAENLPGAPDNINLAPDGTFWIAIIKLDARRM 278 (360)
Q Consensus 215 ~~dg~~l~v~~t~~~~i~~~~~~g~~---------------~~~-~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~ 278 (360)
+++++.++.+.. .+.|..|++.... .+. ...+. ...+....+.++++|++.++...
T Consensus 151 ~~~~~~l~~~~~-dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~------ 222 (372)
T 1k8k_C 151 HPNSVLLAAGSC-DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSANGSRVAWVSH------ 222 (372)
T ss_dssp CTTSSEEEEEET-TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECSSSSEEEEEET------
T ss_pred cCCCCEEEEEcC-CCCEEEEEcccccccccccccccccccchhhheEecC-CCCCeEEEEEECCCCCEEEEEeC------
Confidence 999986665554 5678888853110 011 11111 12234567888999975554443
Q ss_pred HHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCCeEEE
Q 018144 279 KILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGK 356 (360)
Q Consensus 279 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~ 356 (360)
.+.|..+|. +++.+..+....+ .+..+... ++.+.+++ ....|..
T Consensus 223 ----------------------------d~~i~i~d~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~-~d~~i~i 269 (372)
T 1k8k_C 223 ----------------------------DSTVCLADADKKMAVATLASETL----PLLAVTFITESSLVAAG-HDCFPVL 269 (372)
T ss_dssp ----------------------------TTEEEEEEGGGTTEEEEEECSSC----CEEEEEEEETTEEEEEE-TTSSCEE
T ss_pred ----------------------------CCEEEEEECCCCceeEEEccCCC----CeEEEEEecCCCEEEEE-eCCeEEE
Confidence 256777774 6777777765432 45666665 57766666 6666666
Q ss_pred EeC
Q 018144 357 VQL 359 (360)
Q Consensus 357 ~~l 359 (360)
+++
T Consensus 270 ~~~ 272 (372)
T 1k8k_C 270 FTY 272 (372)
T ss_dssp EEE
T ss_pred EEc
Confidence 553
No 141
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.32 E-value=0.00061 Score=66.42 Aligned_cols=167 Identities=13% Similarity=0.190 Sum_probs=95.9
Q ss_pred CCcceEEEcCCCCEEE-EecCCeEEEEE-CCe-eeE----------EEe-cCCe-EEEEeCCCcEEEEcCCC--eEEEee
Q 018144 79 NHPEDASMDKNGVIYT-ATRDGWIKRLQ-DGT-WVN----------WKF-IDSH-LIICDNANGLHKVSEDG--VENFLS 141 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v-~~~~G~I~~~~-~g~-~~~----------~~~-~~g~-L~v~~~~~gl~~~~~~g--~~~l~~ 141 (360)
....++++.++|...+ ++.+|.|..++ +++ ... +.. ++|+ |..+..++.+..++.++ +..+..
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~ 383 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTG 383 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEEC
T ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecC
Confidence 3456788888876554 45788887777 442 221 111 2344 33444333344445444 333321
Q ss_pred ccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEE
Q 018144 142 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYV 221 (360)
Q Consensus 142 ~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l 221 (360)
.. ..+..++++++|+..++ +...+.|..+|.+......+...-....+++++||++.+
T Consensus 384 -~~----~~v~~~~~s~dg~~l~~-----------------~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l 441 (577)
T 2ymu_A 384 -HS----SSVRGVAFSPDGQTIAS-----------------ASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTI 441 (577)
T ss_dssp -CS----SCEEEEEECTTSSCEEE-----------------EETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred -CC----CCeEEEEECCCCCEEEE-----------------EeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEE
Confidence 11 24678899999976664 223567888886533334443333456789999999866
Q ss_pred EEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 222 VVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 222 ~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
..+. ..+.|..++.+++. ...+. ........++++++|.+.++...
T Consensus 442 ~~~~-~d~~v~~w~~~~~~---~~~~~-~~~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 442 ASAS-DDKTVKLWNRNGQL---LQTLT-GHSSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp EEEE-TTSEEEEEETTSCE---EEEEE-CCSSCEEEEEECTTSCEEEEEET
T ss_pred EEEc-CCCEEEEEECCCCE---EEEEc-CCCCCEEEEEEcCCCCEEEEEeC
Confidence 5555 45678888865432 22222 22234567888999987665544
No 142
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.26 E-value=0.0023 Score=57.85 Aligned_cols=166 Identities=13% Similarity=0.092 Sum_probs=93.7
Q ss_pred CcceEEEcCC----C-CEEEEecCCeEEEEE--CCeeeE-EE------------e-cCCe-EEEEeCCCcEEEEc-CCC-
Q 018144 80 HPEDASMDKN----G-VIYTATRDGWIKRLQ--DGTWVN-WK------------F-IDSH-LIICDNANGLHKVS-EDG- 135 (360)
Q Consensus 80 ~Pe~i~~d~~----G-~l~v~~~~G~I~~~~--~g~~~~-~~------------~-~~g~-L~v~~~~~gl~~~~-~~g- 135 (360)
.-.++++.++ + .|..|+.||.|..++ +++... +. . .++. +..+..+.-+..++ .++
T Consensus 34 ~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~ 113 (321)
T 3ow8_A 34 AIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGK 113 (321)
T ss_dssp CEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE
T ss_pred cEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCC
Confidence 3456666543 3 355666888776666 443221 11 1 1233 33334344455556 555
Q ss_pred -eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEE-eCCCcCcceEE
Q 018144 136 -VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVA 213 (360)
Q Consensus 136 -~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~-~~~l~~pngia 213 (360)
...+... . ..+..+++.++|+..++- ...|.+..+|..+++.... .........++
T Consensus 114 ~~~~~~~~-~----~~~~~~~~spdg~~l~~g-----------------~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~ 171 (321)
T 3ow8_A 114 QIKSIDAG-P----VDAWTLAFSPDSQYLATG-----------------THVGKVNIFGVESGKKEYSLDTRGKFILSIA 171 (321)
T ss_dssp EEEEEECC-T----TCCCCEEECTTSSEEEEE-----------------CTTSEEEEEETTTCSEEEEEECSSSCEEEEE
T ss_pred EEEEEeCC-C----ccEEEEEECCCCCEEEEE-----------------cCCCcEEEEEcCCCceeEEecCCCceEEEEE
Confidence 3333211 1 235678999999877752 3357788888876665433 23334567899
Q ss_pred EecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEe
Q 018144 214 LSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 271 (360)
Q Consensus 214 ~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 271 (360)
++||++.+..+.. .+.|..+++...+ ....+. ........++++++|.+.++..
T Consensus 172 ~spdg~~lasg~~-dg~i~iwd~~~~~--~~~~~~-~h~~~v~~l~~spd~~~l~s~s 225 (321)
T 3ow8_A 172 YSPDGKYLASGAI-DGIINIFDIATGK--LLHTLE-GHAMPIRSLTFSPDSQLLVTAS 225 (321)
T ss_dssp ECTTSSEEEEEET-TSCEEEEETTTTE--EEEEEC-CCSSCCCEEEECTTSCEEEEEC
T ss_pred ECCCCCEEEEEcC-CCeEEEEECCCCc--EEEEEc-ccCCceeEEEEcCCCCEEEEEc
Confidence 9999996666554 5678888875422 112221 2223356788899888666543
No 143
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.26 E-value=3.5e-05 Score=71.82 Aligned_cols=78 Identities=9% Similarity=-0.036 Sum_probs=54.8
Q ss_pred ccccEEEcCCC-cEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC-C-------CcCcceEEEecCCCE
Q 018144 150 FANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-G-------FYFANGVALSRDEDY 220 (360)
Q Consensus 150 ~~n~l~~d~dG-~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~-~-------l~~pngia~~~dg~~ 220 (360)
.| ++++++|| .+|+++.....+ ..++..+.|..||+.+++...... + ...|.+++++|||++
T Consensus 67 ~P-~i~~spDg~~lyVan~~~~r~--------~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~ 137 (368)
T 1mda_H 67 LS-LAVAGHSGSDFALASTSFARS--------AKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSAC 137 (368)
T ss_dssp TC-EEEECTTSSCEEEEEEEETTT--------TSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSC
T ss_pred CC-ceEECCCCCEEEEEccccccc--------ccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCE
Confidence 36 89999999 699997531100 012235689999999887754321 1 257999999999999
Q ss_pred EEEEeCC-CCEEEE--EEe
Q 018144 221 VVVCESW-KFRCRK--YWL 236 (360)
Q Consensus 221 l~v~~t~-~~~i~~--~~~ 236 (360)
+||++.. .+.+.. +|.
T Consensus 138 lyVan~~~~~~v~V~~iD~ 156 (368)
T 1mda_H 138 LLFFLFGSSAAAGLSVPGA 156 (368)
T ss_dssp EEEEECSSSCEEEEEETTT
T ss_pred EEEEccCCCCeEEEEEEch
Confidence 9999864 456666 554
No 144
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.26 E-value=0.00051 Score=64.83 Aligned_cols=128 Identities=19% Similarity=0.196 Sum_probs=78.8
Q ss_pred eEEEEeCCC---cEEEEc-CCC-eEEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEE
Q 018144 118 HLIICDNAN---GLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLK 191 (360)
Q Consensus 118 ~L~v~~~~~---gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~ 191 (360)
.|..+.... .++.++ .+| .+.+... . ..+..+++++||+ |+++-+. .....|+.
T Consensus 192 ~la~~s~~~~~~~i~~~d~~tg~~~~l~~~-~----~~~~~~~~spdg~~la~~~~~---------------~g~~~i~~ 251 (415)
T 2hqs_A 192 KLAYVTFESGRSALVIQTLANGAVRQVASF-P----RHNGAPAFSPDGSKLAFALSK---------------TGSLNLYV 251 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCEEEEECC-S----SCEEEEEECTTSSEEEEEECT---------------TSSCEEEE
T ss_pred EEEEEEecCCCcEEEEEECCCCcEEEeecC-C----CcccCEEEcCCCCEEEEEEec---------------CCCceEEE
Confidence 455555443 577777 666 5444221 1 2456889999996 6655321 12346999
Q ss_pred EcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCCC--CEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEE
Q 018144 192 YDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK--FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIA 269 (360)
Q Consensus 192 ~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~~--~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva 269 (360)
+|..+++...+.........++++|||+.++++.... .+|+.++.++.+. ..+. ........++++++|...+.
T Consensus 252 ~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~---~~l~-~~~~~~~~~~~spdG~~l~~ 327 (415)
T 2hqs_A 252 MDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP---QRIT-WEGSQNQDADVSSDGKFMVM 327 (415)
T ss_dssp EETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC---EECC-CSSSEEEEEEECTTSSEEEE
T ss_pred EECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE---EEEe-cCCCcccCeEECCCCCEEEE
Confidence 9998888766554444567899999999777776432 3788888865432 2221 11223445778899974443
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.25 E-value=0.00069 Score=59.19 Aligned_cols=134 Identities=14% Similarity=0.125 Sum_probs=76.8
Q ss_pred CCeEEEEeCCCcEEEEc-CC-C-eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEE
Q 018144 116 DSHLIICDNANGLHKVS-ED-G-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKY 192 (360)
Q Consensus 116 ~g~L~v~~~~~gl~~~~-~~-g-~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~ 192 (360)
+|+.++......++.++ .+ + ...+.... ....+.+++++++|+..++-... ......|+.+
T Consensus 52 dg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~-------------~~~~~~l~~~ 115 (297)
T 2ojh_A 52 DGKYLLLNSEGLLYRLSLAGDPSPEKVDTGF---ATICNNDHGISPDGALYAISDKV-------------EFGKSAIYLL 115 (297)
T ss_dssp TSSEEEEEETTEEEEEESSSCCSCEECCCTT---CCCBCSCCEECTTSSEEEEEECT-------------TTSSCEEEEE
T ss_pred CCCEEEEEcCCeEEEEeCCCCCCceEecccc---ccccccceEECCCCCEEEEEEeC-------------CCCcceEEEE
Confidence 45433333356677787 66 6 44432221 11356788999999744432110 1124689999
Q ss_pred cCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCCCC--EEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC-EEEE
Q 018144 193 DPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKF--RCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIA 269 (360)
Q Consensus 193 d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~~~--~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva 269 (360)
+..+++...+.. ....+.+++++|++.++++....+ +|+.++.++. ....+. ...+.+..+.++++|+ ++++
T Consensus 116 ~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~---~~~~~~-~~~~~~~~~~~s~dg~~l~~~ 190 (297)
T 2ojh_A 116 PSTGGTPRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG---VETRLT-HGEGRNDGPDYSPDGRWIYFN 190 (297)
T ss_dssp ETTCCCCEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC---CEEECC-CSSSCEEEEEECTTSSEEEEE
T ss_pred ECCCCceEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCC---cceEcc-cCCCccccceECCCCCEEEEE
Confidence 987776655433 234778899999998876554444 4555555432 222222 2233456788899987 4444
Q ss_pred E
Q 018144 270 I 270 (360)
Q Consensus 270 ~ 270 (360)
.
T Consensus 191 ~ 191 (297)
T 2ojh_A 191 S 191 (297)
T ss_dssp E
T ss_pred e
Confidence 3
No 146
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.24 E-value=0.00033 Score=66.14 Aligned_cols=192 Identities=16% Similarity=0.114 Sum_probs=115.7
Q ss_pred CcceEEEcCCCC-EEEEecC---CeEEEEE--CCeeeEEE-----------ecCCe-EEEEeCC---CcEEEEc-CCC-e
Q 018144 80 HPEDASMDKNGV-IYTATRD---GWIKRLQ--DGTWVNWK-----------FIDSH-LIICDNA---NGLHKVS-EDG-V 136 (360)
Q Consensus 80 ~Pe~i~~d~~G~-l~v~~~~---G~I~~~~--~g~~~~~~-----------~~~g~-L~v~~~~---~gl~~~~-~~g-~ 136 (360)
...++++.++|. |.+++.+ ..|+.++ +|+...+. .++|+ |+++... ..|+.++ .++ .
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~ 259 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI 259 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE
Confidence 456678888886 4445444 3788888 55443322 12444 5534322 2377777 566 5
Q ss_pred EEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEe
Q 018144 137 ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALS 215 (360)
Q Consensus 137 ~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~ 215 (360)
..+... . .....+++++||+ |+++... .....|+.+|..+++.+.+.........++++
T Consensus 260 ~~l~~~-~----~~~~~~~~spdg~~l~~~s~~---------------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s 319 (415)
T 2hqs_A 260 RQVTDG-R----SNNTEPTWFPDSQNLAFTSDQ---------------AGRPQVYKVNINGGAPQRITWEGSQNQDADVS 319 (415)
T ss_dssp EECCCC-S----SCEEEEEECTTSSEEEEEECT---------------TSSCEEEEEETTSSCCEECCCSSSEEEEEEEC
T ss_pred EeCcCC-C----CcccceEECCCCCEEEEEECC---------------CCCcEEEEEECCCCCEEEEecCCCcccCeEEC
Confidence 443211 1 2356788999996 5554211 11237999999888766554434456688999
Q ss_pred cCCCEEEEEeCC--CCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCE-EEEEecCchhHHHHhhcchhHHHHHH
Q 018144 216 RDEDYVVVCESW--KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTF-WIAIIKLDARRMKILNSSKLIKHVLA 292 (360)
Q Consensus 216 ~dg~~l~v~~t~--~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~l-wva~~~~~~~~~~~~~~~~~~r~~~~ 292 (360)
|||+.++++... ...|+.+++++.+ ...+... .....+++.++|+. ..+....
T Consensus 320 pdG~~l~~~~~~~g~~~i~~~d~~~~~---~~~l~~~--~~~~~~~~spdg~~l~~~s~~~------------------- 375 (415)
T 2hqs_A 320 SDGKFMVMVSSNGGQQHIAKQDLATGG---VQVLSST--FLDETPSLAPNGTMVIYSSSQG------------------- 375 (415)
T ss_dssp TTSSEEEEEEECSSCEEEEEEETTTCC---EEECCCS--SSCEEEEECTTSSEEEEEEEET-------------------
T ss_pred CCCCEEEEEECcCCceEEEEEECCCCC---EEEecCC--CCcCCeEEcCCCCEEEEEEcCC-------------------
Confidence 999988877654 3478888886532 2222211 24567889999974 4443321
Q ss_pred hCCccccccccCCCceEEEEECCCCcEEEEEeCCCC
Q 018144 293 AYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTG 328 (360)
Q Consensus 293 ~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g 328 (360)
....|+.++.+|+....+....|
T Consensus 376 -------------~~~~l~~~d~~g~~~~~l~~~~~ 398 (415)
T 2hqs_A 376 -------------MGSVLNLVSTDGRFKARLPATDG 398 (415)
T ss_dssp -------------TEEEEEEEETTSCCEEECCCSSS
T ss_pred -------------CccEEEEEECCCCcEEEeeCCCC
Confidence 12378888888887777665444
No 147
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.23 E-value=0.0011 Score=61.75 Aligned_cols=178 Identities=8% Similarity=0.038 Sum_probs=112.5
Q ss_pred CCCCcceEEEcCCCCEEEEecC----------------CeEEEEE--CC--eee-E----------------EEec----
Q 018144 77 SVNHPEDASMDKNGVIYTATRD----------------GWIKRLQ--DG--TWV-N----------------WKFI---- 115 (360)
Q Consensus 77 ~~~~Pe~i~~d~~G~l~v~~~~----------------G~I~~~~--~g--~~~-~----------------~~~~---- 115 (360)
.+.+.-.+.+|+.|.||+-+.+ -+|+.+| ++ +.. . +...
T Consensus 85 ~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~ 164 (381)
T 3q6k_A 85 ELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANP 164 (381)
T ss_dssp SSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCT
T ss_pred ceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccC
Confidence 3788999999999999998722 1588888 44 322 1 1111
Q ss_pred -----CCeEEEEeCC-CcEEEEc-CCC--eEEEeec----------cCCccc---cccccEEEcCC----C-cEEEEeCC
Q 018144 116 -----DSHLIICDNA-NGLHKVS-EDG--VENFLSY----------VNGSKL---RFANDVVEASD----G-SLYFTVSS 168 (360)
Q Consensus 116 -----~g~L~v~~~~-~gl~~~~-~~g--~~~l~~~----------~~~~~~---~~~n~l~~d~d----G-~l~vtd~~ 168 (360)
++.+||+|.. .||+.+| .+| .+.+... ..|..+ ..+++|+++++ + .||+.--+
T Consensus 165 ~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pls 244 (381)
T 3q6k_A 165 KGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGS 244 (381)
T ss_dssp TTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESS
T ss_pred CCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECC
Confidence 3569999975 6999999 777 4433110 123222 36778888876 4 68886432
Q ss_pred CCCCCccceecccccCCccEEEEEcC------C-CCeEEEEeCCC--cCcceEEEe-cCCCEEEEEeCCCCEEEEEEecC
Q 018144 169 SKYLPHEYCLDILEGKPHGQLLKYDP------S-SNITTLVADGF--YFANGVALS-RDEDYVVVCESWKFRCRKYWLKG 238 (360)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~g~l~~~d~------~-tg~~~~~~~~l--~~pngia~~-~dg~~l~v~~t~~~~i~~~~~~g 238 (360)
..++|++.. . ..+++.+.+-. ...-+.+++ .+| .||+++...+.|.+++.++
T Consensus 245 -----------------s~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G-~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 245 -----------------AIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTK-VIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp -----------------CSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTC-EEEEEESSSSEEEEEETTS
T ss_pred -----------------CCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCC-eEEEEeccCCeEEEEeCCC
Confidence 225666641 1 12333332221 222346676 555 6999999999999999876
Q ss_pred -Cc-CcceeeeccC-CCCCCceeEEcCCCCEEEEEec
Q 018144 239 -ER-KGKLETFAEN-LPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 239 -~~-~~~~~~~~~~-~~g~pd~i~~d~~G~lwva~~~ 272 (360)
+. ..+.+++... .--.|+++.+|.+|.||+....
T Consensus 307 ~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 307 MPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp CSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEECS
T ss_pred CccccCceEEEEECCCccccCeEEECCCCeEEEEECc
Confidence 31 2344554432 2236999999999999998765
No 148
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.19 E-value=0.00079 Score=61.86 Aligned_cols=163 Identities=9% Similarity=0.050 Sum_probs=96.0
Q ss_pred cceEEEcCCCCEEEEecCCeEEEEE--CCee---------------eEEEe-cCCe-EEEEeCCCcEEEEc-CCC--eEE
Q 018144 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGTW---------------VNWKF-IDSH-LIICDNANGLHKVS-EDG--VEN 138 (360)
Q Consensus 81 Pe~i~~d~~G~l~v~~~~G~I~~~~--~g~~---------------~~~~~-~~g~-L~v~~~~~gl~~~~-~~g--~~~ 138 (360)
-.++++.+++.|.+++.+|.|..++ +++. ..+.+ ++|+ |..++.++-+..++ .++ +..
T Consensus 85 v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~ 164 (344)
T 4gqb_B 85 VADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSS 164 (344)
T ss_dssp EEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 3567888899999999999888877 4421 11111 2444 44444444465666 666 333
Q ss_pred EeeccCCccccccccEEEcCCC-cEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC---CCcCcceEEE
Q 018144 139 FLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD---GFYFANGVAL 214 (360)
Q Consensus 139 l~~~~~~~~~~~~n~l~~d~dG-~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~---~l~~pngia~ 214 (360)
+. ... ..++.+++.++| .++++- ..++.|..+|..+++...... .....+.+++
T Consensus 165 ~~-~h~----~~V~~~~~~~~~~~~l~s~-----------------s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 222 (344)
T 4gqb_B 165 YR-AHA----AQVTCVAASPHKDSVFLSC-----------------SEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAW 222 (344)
T ss_dssp EC-CCS----SCEEEEEECSSCTTEEEEE-----------------ETTSCEEEEETTSSSCEEECC----CCCEEEEEE
T ss_pred Ec-CcC----CceEEEEecCCCCCceeee-----------------ccccccccccccccceeeeeecceeeccceeeee
Confidence 31 111 346788888887 576652 235678888987776544322 1234678899
Q ss_pred ecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEE
Q 018144 215 SRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWI 268 (360)
Q Consensus 215 ~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwv 268 (360)
++++..++++....+.|..+|+...+. ...+. ........+++.++|.-++
T Consensus 223 ~p~~~~~l~sg~~dg~v~~wd~~~~~~--~~~~~-~h~~~v~~v~fsp~g~~~l 273 (344)
T 4gqb_B 223 HPQQSEVFVFGDENGTVSLVDTKSTSC--VLSSA-VHSQCVTGLVFSPHSVPFL 273 (344)
T ss_dssp CSSCTTEEEEEETTSEEEEEESCC--C--CEEEE-CCSSCEEEEEECSSSSCCE
T ss_pred cCCCCcceEEeccCCcEEEEECCCCcE--EEEEc-CCCCCEEEEEEccCCCeEE
Confidence 986655666666667888888754321 12222 1223345678888885333
No 149
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.19 E-value=0.0013 Score=62.27 Aligned_cols=102 Identities=10% Similarity=0.064 Sum_probs=61.9
Q ss_pred ccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE-----EeCCCcCcceEEEecC---CCEE
Q 018144 150 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-----VADGFYFANGVALSRD---EDYV 221 (360)
Q Consensus 150 ~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~-----~~~~l~~pngia~~~d---g~~l 221 (360)
.+..++++++|...++ +...|.++.++..+++... +.......+.+++++| ++.+
T Consensus 151 ~v~~~~~sp~~~~l~~-----------------~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l 213 (450)
T 2vdu_B 151 RPNAISIAEDDTTVII-----------------ADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFI 213 (450)
T ss_dssp CEEEEEECTTSSEEEE-----------------EETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEE
T ss_pred CceEEEEcCCCCEEEE-----------------EeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEE
Confidence 4678899999965553 2235678888876554321 1112235678999999 8756
Q ss_pred EEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 222 VVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 222 ~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
+.+. ..+.|..+++...+ ....+.....+....+++. +|++.++...
T Consensus 214 ~s~~-~d~~i~vwd~~~~~--~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~ 260 (450)
T 2vdu_B 214 ITSD-RDEHIKISHYPQCF--IVDKWLFGHKHFVSSICCG-KDYLLLSAGG 260 (450)
T ss_dssp EEEE-TTSCEEEEEESCTT--CEEEECCCCSSCEEEEEEC-STTEEEEEES
T ss_pred EEEc-CCCcEEEEECCCCc--eeeeeecCCCCceEEEEEC-CCCEEEEEeC
Confidence 5555 45678888875432 1222222233446778888 8876665443
No 150
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.17 E-value=0.0022 Score=58.31 Aligned_cols=212 Identities=12% Similarity=0.096 Sum_probs=124.8
Q ss_pred cceEEEcCCCCEE-EEecCCeEEEEE--CCe--ee---E----------EE-ecCCeEEEEeCCCcEEEEc-CCC--eEE
Q 018144 81 PEDASMDKNGVIY-TATRDGWIKRLQ--DGT--WV---N----------WK-FIDSHLIICDNANGLHKVS-EDG--VEN 138 (360)
Q Consensus 81 Pe~i~~d~~G~l~-v~~~~G~I~~~~--~g~--~~---~----------~~-~~~g~L~v~~~~~gl~~~~-~~g--~~~ 138 (360)
..++++.++|... +++.+|.|..++ +++ .. . +. ..++.|..+..++.+..++ .++ ...
T Consensus 100 v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~ 179 (340)
T 1got_B 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTT 179 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEE
Confidence 4467788877654 455788877777 221 11 1 11 1355666666555666667 566 333
Q ss_pred EeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-CcCcceEEEecC
Q 018144 139 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVALSRD 217 (360)
Q Consensus 139 l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-l~~pngia~~~d 217 (360)
+ .... ..+..+++.++|.++++ +...+.|..+|..+++......+ ....+.++++|+
T Consensus 180 ~-~~h~----~~v~~~~~~~~~~~l~s-----------------g~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~ 237 (340)
T 1got_B 180 F-TGHT----GDVMSLSLAPDTRLFVS-----------------GACDASAKLWDVREGMCRQTFTGHESDINAICFFPN 237 (340)
T ss_dssp E-CCCS----SCEEEEEECTTSSEEEE-----------------EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTT
T ss_pred E-cCCC----CceEEEEECCCCCEEEE-----------------EeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCC
Confidence 3 1111 24678899999988776 23356788899877765543333 345788999999
Q ss_pred CCEEEEEeCCCCEEEEEEecCCcCcceeeecc-CCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCc
Q 018144 218 EDYVVVCESWKFRCRKYWLKGERKGKLETFAE-NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 296 (360)
Q Consensus 218 g~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~-~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~ 296 (360)
++.++.+. ..+.|..+++.... ....+.. ........++++++|.+.++...
T Consensus 238 ~~~l~s~s-~d~~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~------------------------ 290 (340)
T 1got_B 238 GNAFATGS-DDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFSKSGRLLLAGYD------------------------ 290 (340)
T ss_dssp SSEEEEEE-TTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEET------------------------
T ss_pred CCEEEEEc-CCCcEEEEECCCCc--EEEEEccCCcccceEEEEECCCCCEEEEECC------------------------
Confidence 98665554 45678888875321 1122211 11112456788999987776554
Q ss_pred cccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEE-CCE-EEEEeCCCCeEEE
Q 018144 297 LFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNH-LYVISLTSNFIGK 356 (360)
Q Consensus 297 ~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~g~-Lylgs~~~~~i~~ 356 (360)
.+.|..+|. .++.+..+....+ .++++... +|. |.-|+. ...|..
T Consensus 291 ----------d~~i~vwd~~~~~~~~~~~~h~~----~v~~~~~s~dg~~l~s~s~-D~~i~i 338 (340)
T 1got_B 291 ----------DFNCNVWDALKADRAGVLAGHDN----RVSCLGVTDDGMAVATGSW-DSFLKI 338 (340)
T ss_dssp ----------TSEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSSCEEEEET-TSCEEE
T ss_pred ----------CCeEEEEEcccCcEeeEeecCCC----cEEEEEEcCCCCEEEEEcC-CccEEe
Confidence 256777774 5677777664333 46677665 344 444443 334433
No 151
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.17 E-value=0.0021 Score=58.53 Aligned_cols=171 Identities=11% Similarity=0.052 Sum_probs=95.4
Q ss_pred CCCcceEEEcCCCCEE-EEecCCeEEEEE--CCee-eEEE----------e-cCCe-EEEEeCCCcEEEEc-CCC---eE
Q 018144 78 VNHPEDASMDKNGVIY-TATRDGWIKRLQ--DGTW-VNWK----------F-IDSH-LIICDNANGLHKVS-EDG---VE 137 (360)
Q Consensus 78 ~~~Pe~i~~d~~G~l~-v~~~~G~I~~~~--~g~~-~~~~----------~-~~g~-L~v~~~~~gl~~~~-~~g---~~ 137 (360)
...-.++++.++|.+. .++.+|.|..++ +++. ..+. . ++|+ |..+..++-+..++ .++ .+
T Consensus 55 ~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~ 134 (340)
T 1got_B 55 LAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVR 134 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCE
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcce
Confidence 3455678888888654 555899988888 4432 1111 1 2343 44444444444444 322 22
Q ss_pred EEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-CcCcceEEEec
Q 018144 138 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVALSR 216 (360)
Q Consensus 138 ~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-l~~pngia~~~ 216 (360)
.... ..+. ...+..+.+.+++.+..+ ...+.|..+|..+++......+ ......+++++
T Consensus 135 ~~~~-~~~h-~~~v~~~~~~~~~~l~s~------------------s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~ 194 (340)
T 1got_B 135 VSRE-LAGH-TGYLSCCRFLDDNQIVTS------------------SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP 194 (340)
T ss_dssp EEEE-EECC-SSCEEEEEEEETTEEEEE------------------ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred eEEE-ecCC-CccEEEEEECCCCcEEEE------------------ECCCcEEEEECCCCcEEEEEcCCCCceEEEEECC
Confidence 2211 1111 123455666677765443 2356788889887776544333 33567899999
Q ss_pred CCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 217 DEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 217 dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
+++.+ ++....+.|..+++.... ....+. ........+++.++|++.++...
T Consensus 195 ~~~~l-~sg~~d~~v~~wd~~~~~--~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~ 246 (340)
T 1got_B 195 DTRLF-VSGACDASAKLWDVREGM--CRQTFT-GHESDINAICFFPNGNAFATGSD 246 (340)
T ss_dssp TSSEE-EEEETTSCEEEEETTTCS--EEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCEE-EEEeCCCcEEEEECCCCe--eEEEEc-CCcCCEEEEEEcCCCCEEEEEcC
Confidence 99854 444456678888875321 122222 22334567888999987665443
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.16 E-value=0.00085 Score=67.46 Aligned_cols=185 Identities=12% Similarity=0.062 Sum_probs=99.1
Q ss_pred CCcceEEEcCCCCEEEEecCCeEEEEE--CCeeeEEEe-----------cCCe-EEEEeCCCcEEEEc-CC-----C-eE
Q 018144 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKF-----------IDSH-LIICDNANGLHKVS-ED-----G-VE 137 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v~~~~G~I~~~~--~g~~~~~~~-----------~~g~-L~v~~~~~gl~~~~-~~-----g-~~ 137 (360)
..+.++++.+++.+.++ .++.|+.++ +++...+.. ++|+ |..+ .+..|+.++ .+ + ..
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~ 159 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAI 159 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCE
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcE
Confidence 45778889888655554 458888888 554433221 2443 4433 355677777 56 6 44
Q ss_pred EEeeccCCc----------cccccccEEEcCCCc-EEEEeCCCCCCCccce---------------ecc-cccCCccEEE
Q 018144 138 NFLSYVNGS----------KLRFANDVVEASDGS-LYFTVSSSKYLPHEYC---------------LDI-LEGKPHGQLL 190 (360)
Q Consensus 138 ~l~~~~~~~----------~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~---------------~~~-~~~~~~g~l~ 190 (360)
.+....... .+..+.++++++||+ |+++.... -....+. +.. -.......|+
T Consensus 160 ~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~-~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 238 (706)
T 2z3z_A 160 AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQ-SMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVG 238 (706)
T ss_dssp ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEEC-TTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEE
T ss_pred EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECC-CCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEE
Confidence 332111110 012257899999996 54442100 0000000 000 0011346799
Q ss_pred EEcCCCCeEEEEeCC---CcCcceEEEecCCCEEEEEeCCC----CEEEEEEecCCcCcceeeec-cCCCC---CCceeE
Q 018144 191 KYDPSSNITTLVADG---FYFANGVALSRDEDYVVVCESWK----FRCRKYWLKGERKGKLETFA-ENLPG---APDNIN 259 (360)
Q Consensus 191 ~~d~~tg~~~~~~~~---l~~pngia~~~dg~~l~v~~t~~----~~i~~~~~~g~~~~~~~~~~-~~~~g---~pd~i~ 259 (360)
.+|.++++...+... ...+..++++|||+.++++.... ..|+.++.++.+ ....+. ..... ....+.
T Consensus 239 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~--~~~~~~~~~~~~~~~~~~~~~ 316 (706)
T 2z3z_A 239 IYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR--FVRTLFVETDKHYVEPLHPLT 316 (706)
T ss_dssp EEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC--EEEEEEEEECSSCCCCCSCCE
T ss_pred EEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc--eeeEEEEccCCCeECccCCce
Confidence 999988887655422 23456899999999888765432 378888876431 111111 11111 135678
Q ss_pred EcC--CCCEEE
Q 018144 260 LAP--DGTFWI 268 (360)
Q Consensus 260 ~d~--~G~lwv 268 (360)
+.+ +|.+.+
T Consensus 317 ~sp~~dg~~l~ 327 (706)
T 2z3z_A 317 FLPGSNNQFIW 327 (706)
T ss_dssp ECTTCSSEEEE
T ss_pred eecCCCCEEEE
Confidence 888 887433
No 153
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.16 E-value=0.0002 Score=66.14 Aligned_cols=169 Identities=11% Similarity=0.081 Sum_probs=92.6
Q ss_pred cceEEEcCCCCEEEEe-c------CCeEEEEE--CCe---------------eeEEE-ecCCeEEEEeCCCcEEEEc-CC
Q 018144 81 PEDASMDKNGVIYTAT-R------DGWIKRLQ--DGT---------------WVNWK-FIDSHLIICDNANGLHKVS-ED 134 (360)
Q Consensus 81 Pe~i~~d~~G~l~v~~-~------~G~I~~~~--~g~---------------~~~~~-~~~g~L~v~~~~~gl~~~~-~~ 134 (360)
-.++++.+||.+.++. . +|.|..++ ++. +..+. .+++++.++..++.+..++ .+
T Consensus 45 V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~ 124 (357)
T 4g56_B 45 IGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILE 124 (357)
T ss_dssp EEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC----
T ss_pred EEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccc
Confidence 4578888899877665 3 56677665 331 11122 2456777776554444445 33
Q ss_pred C--eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-CcCcce
Q 018144 135 G--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANG 211 (360)
Q Consensus 135 g--~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-l~~png 211 (360)
+ .........+. -..++.+++.++|+..++ +...+.|..+|..+++....... ....+.
T Consensus 125 ~~~~~~~~~~~~~h-~~~V~~v~~spdg~~l~s-----------------gs~dg~v~iwd~~~~~~~~~~~~h~~~v~~ 186 (357)
T 4g56_B 125 KESLLVNKFAKYEH-DDIVKTLSVFSDGTQAVS-----------------GGKDFSVKVWDLSQKAVLKSYNAHSSEVNC 186 (357)
T ss_dssp ----CCCCEEECCC-SSCEEEEEECSSSSEEEE-----------------EETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred cceeEEEeeccCCC-CCCEEEEEECCCCCEEEE-----------------EeCCCeEEEEECCCCcEEEEEcCCCCCEEE
Confidence 3 11110001111 134778999999987775 23356788899888876554433 345678
Q ss_pred EEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCC-CEEE
Q 018144 212 VALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDG-TFWI 268 (360)
Q Consensus 212 ia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G-~lwv 268 (360)
++++++++.++++....+.|..+++...+......+. .....+..+++.+++ ++.+
T Consensus 187 v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~~~v~~v~~sp~~~~~la 243 (357)
T 4g56_B 187 VAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFC-ASDTIPTSVTWHPEKDDTFA 243 (357)
T ss_dssp EEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCT-TCCSCEEEEEECTTSTTEEE
T ss_pred EEEccCCCceeeeeccCCceEEEECCCCceeeeeeec-cccccccchhhhhcccceEE
Confidence 9999988656666555667888877533211111111 122234556676654 4443
No 154
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.16 E-value=0.0017 Score=58.80 Aligned_cols=234 Identities=14% Similarity=0.064 Sum_probs=122.9
Q ss_pred CCcceEEEcCCCCE-EEEecCCeEEEEE--CCeeeE-E---------Ee-cCC-eEEEEeCC-----CcEEEEc-CCC--
Q 018144 79 NHPEDASMDKNGVI-YTATRDGWIKRLQ--DGTWVN-W---------KF-IDS-HLIICDNA-----NGLHKVS-EDG-- 135 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l-~v~~~~G~I~~~~--~g~~~~-~---------~~-~~g-~L~v~~~~-----~gl~~~~-~~g-- 135 (360)
..-.++++.++|.. ++++.+|.|..++ +++... + .. +++ .|+++... ..+..++ ..+
T Consensus 75 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~ 154 (369)
T 3zwl_B 75 GTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSA 154 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTT
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCcc
Confidence 34567888887754 4555889898888 443221 1 11 233 34444433 3444454 211
Q ss_pred eEEEeecc--C------CccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCC-CeEEEE-eCC
Q 018144 136 VENFLSYV--N------GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NITTLV-ADG 205 (360)
Q Consensus 136 ~~~l~~~~--~------~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t-g~~~~~-~~~ 205 (360)
...+.... . ......+..++++++|+..++ +...|.|..+|..+ ++.... ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------------~~~dg~i~i~d~~~~~~~~~~~~~~ 217 (369)
T 3zwl_B 155 THELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIA-----------------GHKDGKISKYDVSNNYEYVDSIDLH 217 (369)
T ss_dssp TCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEE-----------------EETTSEEEEEETTTTTEEEEEEECC
T ss_pred ceeecccccceeeeccCCcCccceeEEEEcCCCCEEEE-----------------EcCCCEEEEEECCCCcEeEEEEecC
Confidence 11111000 0 000115677888888876554 23357899999876 444332 223
Q ss_pred CcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCch-hHHHHhhcc
Q 018144 206 FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDA-RRMKILNSS 284 (360)
Q Consensus 206 l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~-~~~~~~~~~ 284 (360)
......++++++++.++.+.. .+.|..+++...+ ....+. .......+.++++|.+.+....... ......
T Consensus 218 ~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~--~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--- 289 (369)
T 3zwl_B 218 EKSISDMQFSPDLTYFITSSR-DTNSFLVDVSTLQ--VLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTS--- 289 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEET-TSEEEEEETTTCC--EEEEEE--CSSCEEEEEECSSSSEEEEEECCC-----------
T ss_pred CCceeEEEECCCCCEEEEecC-CceEEEEECCCCc--eeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEe---
Confidence 445678999999987766654 5688889875422 122222 2233567888888875554333110 000000
Q ss_pred hhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCCeEEEEeC
Q 018144 285 KLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 285 ~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~~~l 359 (360)
.......+..++. .++.+..+....+ .++.+... ++++.+..-....|..+++
T Consensus 290 ------------------~~~~~~~i~~~d~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 290 ------------------ANEGKFEARFYHKIFEEEIGRVQGHFG----PLNTVAISPQGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp -----------------------CEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred ------------------cCCCcceeEEEecCCCcchhheecccC----cEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 0001114555564 5666666654433 46677765 4554444445667776654
No 155
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.14 E-value=0.001 Score=61.51 Aligned_cols=218 Identities=13% Similarity=0.086 Sum_probs=125.7
Q ss_pred CcceEEEcCCCCE-EEEecCCeEEEEE-CCeee-----------EEEe-cCC-eEEEEeCCCcEEEEc-CCC--eEEEee
Q 018144 80 HPEDASMDKNGVI-YTATRDGWIKRLQ-DGTWV-----------NWKF-IDS-HLIICDNANGLHKVS-EDG--VENFLS 141 (360)
Q Consensus 80 ~Pe~i~~d~~G~l-~v~~~~G~I~~~~-~g~~~-----------~~~~-~~g-~L~v~~~~~gl~~~~-~~g--~~~l~~ 141 (360)
...++++.++|.+ .+++.+|.|..++ +++.. .+.. +++ .|+.++.++.+..++ .++ ...+..
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 189 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFEL 189 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECC
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeec
Confidence 4567888888764 5566888888888 55322 1222 233 466666556677777 566 333321
Q ss_pred ccCCc----------cccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC-CCcCcc
Q 018144 142 YVNGS----------KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-GFYFAN 210 (360)
Q Consensus 142 ~~~~~----------~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~-~l~~pn 210 (360)
..... ....+..+.+.+++.++++ ...|.|..+|..+++...... ......
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~g~i~~~d~~~~~~~~~~~~~~~~i~ 251 (425)
T 1r5m_A 190 KETGGSSINAENHSGDGSLGVDVEWVDDDKFVIP------------------GPKGAIFVYQITEKTPTGKLIGHHGPIS 251 (425)
T ss_dssp C---------------CCCBSCCEEEETTEEEEE------------------CGGGCEEEEETTCSSCSEEECCCSSCEE
T ss_pred cccCccceeeccccCCcceeeEEEEcCCCEEEEE------------------cCCCeEEEEEcCCCceeeeeccCCCceE
Confidence 11000 0011667778787776663 235788999987665433322 234467
Q ss_pred eEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHH
Q 018144 211 GVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHV 290 (360)
Q Consensus 211 gia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~ 290 (360)
.++++++++.++.+.. .+.|..+++...+ ....+. ........+.+.++| +.++...
T Consensus 252 ~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~--~~~~~~-~~~~~i~~~~~~~~~-~l~~~~~------------------ 308 (425)
T 1r5m_A 252 VLEFNDTNKLLLSASD-DGTLRIWHGGNGN--SQNCFY-GHSQSIVSASWVGDD-KVISCSM------------------ 308 (425)
T ss_dssp EEEEETTTTEEEEEET-TSCEEEECSSSBS--CSEEEC-CCSSCEEEEEEETTT-EEEEEET------------------
T ss_pred EEEECCCCCEEEEEcC-CCEEEEEECCCCc--cceEec-CCCccEEEEEECCCC-EEEEEeC------------------
Confidence 8999999986666654 5678888875422 122221 223345678888888 4443333
Q ss_pred HHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEE-CC-EEEEEeCCCCeEEEEeC
Q 018144 291 LAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DN-HLYVISLTSNFIGKVQL 359 (360)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~g-~Lylgs~~~~~i~~~~l 359 (360)
.+.|..++. +++.+..+....+ .++.+... ++ .|+.++ ....|..+++
T Consensus 309 ----------------d~~i~i~d~~~~~~~~~~~~~~~----~i~~~~~s~~~~~l~~~~-~dg~i~i~~~ 359 (425)
T 1r5m_A 309 ----------------DGSVRLWSLKQNTLLALSIVDGV----PIFAGRISQDGQKYAVAF-MDGQVNVYDL 359 (425)
T ss_dssp ----------------TSEEEEEETTTTEEEEEEECTTC----CEEEEEECTTSSEEEEEE-TTSCEEEEEC
T ss_pred ----------------CCcEEEEECCCCcEeEecccCCc----cEEEEEEcCCCCEEEEEE-CCCeEEEEEC
Confidence 257777774 5677766664333 46666665 34 455544 4556766654
No 156
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.13 E-value=0.00085 Score=58.58 Aligned_cols=165 Identities=14% Similarity=0.095 Sum_probs=97.8
Q ss_pred CCcceEEEcCCCCEEEEecCCeEEEEE--C-CeeeEEE-------------ecCC-eEEEEeC----CCcEEEEc-CCC-
Q 018144 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--D-GTWVNWK-------------FIDS-HLIICDN----ANGLHKVS-EDG- 135 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v~~~~G~I~~~~--~-g~~~~~~-------------~~~g-~L~v~~~----~~gl~~~~-~~g- 135 (360)
....++++.++|..++...++.|+.++ + ++...+. .++| .|+++.. ...++.++ .++
T Consensus 42 ~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~ 121 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT 121 (297)
T ss_dssp SCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC
T ss_pred cceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc
Confidence 456788999999876666688999999 5 5433221 1233 3444442 23566666 444
Q ss_pred eEEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEE
Q 018144 136 VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVAL 214 (360)
Q Consensus 136 ~~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~ 214 (360)
.+.+... ..++.+++.++|+ |+++... ...-.|+.++..+++...+.........+++
T Consensus 122 ~~~~~~~------~~~~~~~~spdg~~l~~~~~~---------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (297)
T 2ojh_A 122 PRLMTKN------LPSYWHGWSPDGKSFTYCGIR---------------DQVFDIYSMDIDSGVETRLTHGEGRNDGPDY 180 (297)
T ss_dssp CEECCSS------SSEEEEEECTTSSEEEEEEEE---------------TTEEEEEEEETTTCCEEECCCSSSCEEEEEE
T ss_pred eEEeecC------CCccceEECCCCCEEEEEECC---------------CCceEEEEEECCCCcceEcccCCCccccceE
Confidence 4333211 1256678899996 5544211 1122688888877777665554556788999
Q ss_pred ecCCCEEEEEeC--CCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEE
Q 018144 215 SRDEDYVVVCES--WKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWI 268 (360)
Q Consensus 215 ~~dg~~l~v~~t--~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwv 268 (360)
++||+.++++.. ...+|+.++.++.. ...+. ........+.++++|+..+
T Consensus 181 s~dg~~l~~~~~~~~~~~i~~~~~~~~~---~~~~~-~~~~~~~~~~~s~dg~~l~ 232 (297)
T 2ojh_A 181 SPDGRWIYFNSSRTGQMQIWRVRVDGSS---VERIT-DSAYGDWFPHPSPSGDKVV 232 (297)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTSSC---EEECC-CCSEEEEEEEECTTSSEEE
T ss_pred CCCCCEEEEEecCCCCccEEEECCCCCC---cEEEe-cCCcccCCeEECCCCCEEE
Confidence 999998877753 34567777654432 22221 1122244577899997443
No 157
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.12 E-value=0.00028 Score=64.73 Aligned_cols=132 Identities=16% Similarity=0.168 Sum_probs=86.0
Q ss_pred EEEEEcCCCCeEEEEe-------CCCcCcceEEE--ecC-CC-EEEEEeCCCCEEEEEEecCC---cCc--ceeeeccCC
Q 018144 188 QLLKYDPSSNITTLVA-------DGFYFANGVAL--SRD-ED-YVVVCESWKFRCRKYWLKGE---RKG--KLETFAENL 251 (360)
Q Consensus 188 ~l~~~d~~tg~~~~~~-------~~l~~pngia~--~~d-g~-~l~v~~t~~~~i~~~~~~g~---~~~--~~~~~~~~~ 251 (360)
.+|.+||++++++.+. +.+..|.|+|+ +++ ++ ++|+++.. +++..|++... +.. ....| .+
T Consensus 102 ~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f--~l 178 (355)
T 3amr_A 102 EIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAF--KM 178 (355)
T ss_dssp EEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEE--EC
T ss_pred EEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEe--cC
Confidence 4567798888877662 34578999999 664 43 57777765 68888776321 111 11222 24
Q ss_pred CCCCceeEEcC-CCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC--C----CcEEEEEe
Q 018144 252 PGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE--D----GTIIRNLV 324 (360)
Q Consensus 252 ~g~pd~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~--~----g~~~~~~~ 324 (360)
++-|.++++|+ .|.|||+... .+|++|+. + ++++..+.
T Consensus 179 gsq~EgcvvDd~~g~Lyv~eEd-----------------------------------~GIw~~da~p~~~~~~~~v~~~~ 223 (355)
T 3amr_A 179 NSQTEGMAADDEYGRLYIAEED-----------------------------------EAIWKFSAEPDGGSNGTVIDRAD 223 (355)
T ss_dssp SSCEEEEEEETTTTEEEEEETT-----------------------------------TEEEEEECSTTSCSCCEEEEEBS
T ss_pred CCCcceEEEcCCCCeEEEeccc-----------------------------------ceEEEEeCCcCCCCCceEEEEec
Confidence 55688999985 6799999876 36999984 3 33444332
Q ss_pred CCCCCcccceeeEEEE--C---CEEEEEeCCCCeEEEEeC
Q 018144 325 DPTGQLMSFVTSGLQV--D---NHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 325 ~~~g~~~~~~t~~~~~--~---g~Lylgs~~~~~i~~~~l 359 (360)
.+.....+.++... . |+|++++-.++.+.+++.
T Consensus 224 --~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 224 --GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp --SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEES
T ss_pred --CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEEC
Confidence 23223356666553 2 579999999999999875
No 158
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.10 E-value=0.0034 Score=58.40 Aligned_cols=166 Identities=10% Similarity=0.062 Sum_probs=102.2
Q ss_pred CcceEEEcCCCC-EEEEecCCeEEEEE--CCee-e----------EEEecCCeEEEEeCCCcEEEEc-C-CC--eEEEee
Q 018144 80 HPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW-V----------NWKFIDSHLIICDNANGLHKVS-E-DG--VENFLS 141 (360)
Q Consensus 80 ~Pe~i~~d~~G~-l~v~~~~G~I~~~~--~g~~-~----------~~~~~~g~L~v~~~~~gl~~~~-~-~g--~~~l~~ 141 (360)
...++++.++|. |.+++.+|.|..++ +++. . .+...+..|+.++.++.+..++ . .+ ...+.
T Consensus 136 ~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~- 214 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQ- 214 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEE-
T ss_pred CEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEc-
Confidence 356788888775 45566888888888 4432 1 1223344456666555566666 4 23 22221
Q ss_pred ccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe-CCCcCcceEEEecCCCE
Q 018144 142 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDY 220 (360)
Q Consensus 142 ~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~-~~l~~pngia~~~dg~~ 220 (360)
... ..+..+++.++|.+.++ +...+.|..+|..+++..... ........+++++++..
T Consensus 215 ~~~----~~v~~~~~~~~~~~l~s-----------------~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 273 (401)
T 4aez_A 215 GHS----SEVCGLAWRSDGLQLAS-----------------GGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSN 273 (401)
T ss_dssp CCS----SCEEEEEECTTSSEEEE-----------------EETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTT
T ss_pred CCC----CCeeEEEEcCCCCEEEE-----------------EeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCC
Confidence 111 24678899999987665 223567888998776654433 33445689999998876
Q ss_pred EEEEeC--CCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEe
Q 018144 221 VVVCES--WKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 271 (360)
Q Consensus 221 l~v~~t--~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 271 (360)
++++.. ..+.|..+++...+ ....+. .......+++.++|...++..
T Consensus 274 ll~~~~gs~d~~i~i~d~~~~~--~~~~~~--~~~~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 274 LLATGGGTMDKQIHFWNAATGA--RVNTVD--AGSQVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp EEEEECCTTTCEEEEEETTTCC--EEEEEE--CSSCEEEEEECSSSSEEEEEE
T ss_pred EEEEecCCCCCEEEEEECCCCC--EEEEEe--CCCcEEEEEECCCCCeEEEEe
Confidence 777754 46788888875432 122221 223466788899998776654
No 159
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.10 E-value=0.0051 Score=57.15 Aligned_cols=216 Identities=13% Similarity=0.089 Sum_probs=117.5
Q ss_pred ceEEEcCCCCEE-EEecCCeEEEEE--CCeeeE-----------EEe-cCC-eEEEEeCCCcEEEEc-CCC-eEEEeecc
Q 018144 82 EDASMDKNGVIY-TATRDGWIKRLQ--DGTWVN-----------WKF-IDS-HLIICDNANGLHKVS-EDG-VENFLSYV 143 (360)
Q Consensus 82 e~i~~d~~G~l~-v~~~~G~I~~~~--~g~~~~-----------~~~-~~g-~L~v~~~~~gl~~~~-~~g-~~~l~~~~ 143 (360)
.++++.++|... +++.+|.|..++ +++... +.. +++ .|+.+..++-+..++ .++ .......
T Consensus 127 ~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~- 205 (393)
T 1erj_A 127 RSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI- 205 (393)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEc-
Confidence 478888888654 455889888888 443221 111 233 455555444555566 556 2221111
Q ss_pred CCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC--------CCcCcceEEE
Q 018144 144 NGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--------GFYFANGVAL 214 (360)
Q Consensus 144 ~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~--------~l~~pngia~ 214 (360)
. ..+..+++.+ +|++.++- ...+.|..+|..+++...... .......+++
T Consensus 206 ~----~~v~~~~~~~~~~~~l~~~-----------------s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 264 (393)
T 1erj_A 206 E----DGVTTVAVSPGDGKYIAAG-----------------SLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF 264 (393)
T ss_dssp S----SCEEEEEECSTTCCEEEEE-----------------ETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEE
T ss_pred C----CCcEEEEEECCCCCEEEEE-----------------cCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEE
Confidence 1 2355677887 77776652 235678888887776543221 1224578999
Q ss_pred ecCCCEEEEEeCCCCEEEEEEecCCcC---------cceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcch
Q 018144 215 SRDEDYVVVCESWKFRCRKYWLKGERK---------GKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSK 285 (360)
Q Consensus 215 ~~dg~~l~v~~t~~~~i~~~~~~g~~~---------~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~ 285 (360)
++|++.++.+. ..+.|..+++..... +...............+++.++|.+.++...
T Consensus 265 ~~~g~~l~s~s-~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~------------- 330 (393)
T 1erj_A 265 TRDGQSVVSGS-LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK------------- 330 (393)
T ss_dssp CTTSSEEEEEE-TTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEET-------------
T ss_pred CCCCCEEEEEe-CCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeC-------------
Confidence 99998665554 457788888753211 0011000111223345667777765554433
Q ss_pred hHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEE-------CCEEEEEeCCCCeEEEE
Q 018144 286 LIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-------DNHLYVISLTSNFIGKV 357 (360)
Q Consensus 286 ~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-------~g~Lylgs~~~~~i~~~ 357 (360)
.+.|..+|. .|+.+..+....+ .+.++... ++.+++.+-....|..+
T Consensus 331 ---------------------D~~v~iwd~~~~~~~~~l~~h~~----~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW 385 (393)
T 1erj_A 331 ---------------------DRGVLFWDKKSGNPLLMLQGHRN----SVISVAVANGSSLGPEYNVFATGSGDCKARIW 385 (393)
T ss_dssp ---------------------TSEEEEEETTTCCEEEEEECCSS----CEEEEEECSSCTTCTTCEEEEEEETTSEEEEE
T ss_pred ---------------------CCeEEEEECCCCeEEEEECCCCC----CEEEEEecCCcCcCCCCCEEEEECCCCcEEEC
Confidence 256777774 5777776654332 35555543 24555555555566555
Q ss_pred e
Q 018144 358 Q 358 (360)
Q Consensus 358 ~ 358 (360)
+
T Consensus 386 ~ 386 (393)
T 1erj_A 386 K 386 (393)
T ss_dssp E
T ss_pred c
Confidence 4
No 160
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.09 E-value=3.7e-05 Score=71.63 Aligned_cols=98 Identities=4% Similarity=-0.131 Sum_probs=67.1
Q ss_pred CcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeC---------CCCE
Q 018144 160 GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCES---------WKFR 230 (360)
Q Consensus 160 G~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t---------~~~~ 230 (360)
.++|+++...+ .... .|..||++++++.........| ++++++|++.+||+++ ..+.
T Consensus 32 ~~~yV~~~~~~------------~~~d-~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~ 97 (368)
T 1mda_H 32 RRSHITLPAYF------------AGTT-ENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDY 97 (368)
T ss_dssp TEEEEEECTTT------------CSSE-EEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEE
T ss_pred CeEEEECCccC------------Cccc-eEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCE
Confidence 57999986511 0011 7999999998886544444568 9999999999999984 2467
Q ss_pred EEEEEecCCcCcceeeeccCC-----CCCCceeEEcCCC-CEEEEEec
Q 018144 231 CRKYWLKGERKGKLETFAENL-----PGAPDNINLAPDG-TFWIAIIK 272 (360)
Q Consensus 231 i~~~~~~g~~~~~~~~~~~~~-----~g~pd~i~~d~~G-~lwva~~~ 272 (360)
|..||+...+.. .++-.... ...|.++++++|| .+||+...
T Consensus 98 VsviD~~T~~vv-~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~ 144 (368)
T 1mda_H 98 VEVFDPVTFLPI-ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG 144 (368)
T ss_dssp EEEECTTTCCEE-EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS
T ss_pred EEEEECCCCCEE-EEEECCCccccccCCCcceEEEcCCCCEEEEEccC
Confidence 999998643221 11111100 1259999999999 69998764
No 161
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.08 E-value=0.0012 Score=61.51 Aligned_cols=136 Identities=10% Similarity=0.027 Sum_probs=84.6
Q ss_pred cceEEEcCCC-CEEEEecCCeEEEEE-C-Ce---------eeE--EEecCC-eEEEEeCCCcEEEEc-CCC-eEEEeecc
Q 018144 81 PEDASMDKNG-VIYTATRDGWIKRLQ-D-GT---------WVN--WKFIDS-HLIICDNANGLHKVS-EDG-VENFLSYV 143 (360)
Q Consensus 81 Pe~i~~d~~G-~l~v~~~~G~I~~~~-~-g~---------~~~--~~~~~g-~L~v~~~~~gl~~~~-~~g-~~~l~~~~ 143 (360)
..+++++++| .|++++.+|.|+.++ . ++ ... +...++ .|.+++.++.+..++ .++ ........
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h 138 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAH 138 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSS
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccc
Confidence 4477888765 577777899999888 3 21 111 112344 455555555566667 555 32221111
Q ss_pred CCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE-EeCCCcCcceEEEecCCCEEE
Q 018144 144 NGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGFYFANGVALSRDEDYVV 222 (360)
Q Consensus 144 ~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~-~~~~l~~pngia~~~dg~~l~ 222 (360)
. ..+..+++.++|.+.++ +...+.|..+|..+++... +.........++++++++.++
T Consensus 139 ~----~~v~~~~~~~~~~~l~s-----------------~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 197 (420)
T 3vl1_A 139 V----SEITKLKFFPSGEALIS-----------------SSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVL 197 (420)
T ss_dssp S----SCEEEEEECTTSSEEEE-----------------EETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEE
T ss_pred c----CccEEEEECCCCCEEEE-----------------EeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEE
Confidence 1 35788999999986664 2345788899987665433 332344567899999998666
Q ss_pred EEeCCCCEEEEEEecC
Q 018144 223 VCESWKFRCRKYWLKG 238 (360)
Q Consensus 223 v~~t~~~~i~~~~~~g 238 (360)
.+.. .+.|..+++..
T Consensus 198 s~~~-d~~v~iwd~~~ 212 (420)
T 3vl1_A 198 SASL-DGTIRLWECGT 212 (420)
T ss_dssp EEET-TSCEEEEETTT
T ss_pred EEcC-CCcEEEeECCC
Confidence 5554 56788888753
No 162
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.08 E-value=0.0026 Score=58.60 Aligned_cols=156 Identities=12% Similarity=-0.019 Sum_probs=97.0
Q ss_pred cccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-------CcCcceEEEecCCCEE
Q 018144 149 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-------FYFANGVALSRDEDYV 221 (360)
Q Consensus 149 ~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-------l~~pngia~~~dg~~l 221 (360)
..+..+++.++| +.++ +...|.|..+|..+++....... ......++++++++.+
T Consensus 187 ~~i~~~~~~~~~-~l~~-----------------~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l 248 (397)
T 1sq9_A 187 QFATSVDISERG-LIAT-----------------GFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLL 248 (397)
T ss_dssp CCCCEEEECTTS-EEEE-----------------ECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEE
T ss_pred CCceEEEECCCc-eEEE-----------------EeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEE
Confidence 357889999999 5554 33467899999887766544333 4456789999999866
Q ss_pred EEEeCCC---CEEEEEEecCCcCcceeeeccC------------CCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchh
Q 018144 222 VVCESWK---FRCRKYWLKGERKGKLETFAEN------------LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKL 286 (360)
Q Consensus 222 ~v~~t~~---~~i~~~~~~g~~~~~~~~~~~~------------~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~ 286 (360)
+++.. . +.|..|++...+ ....+... .......+.++++|++.++...
T Consensus 249 ~~~~~-d~~~g~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------- 311 (397)
T 1sq9_A 249 AIAHD-SNSFGCITLYETEFGE--RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW-------------- 311 (397)
T ss_dssp EEEEE-ETTEEEEEEEETTTCC--EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET--------------
T ss_pred EEEec-CCCCceEEEEECCCCc--ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC--------------
Confidence 65553 4 578888875321 12222210 2233567888999986665443
Q ss_pred HHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEe------CC-----CCCc------ccceeeEEEEC-C-----
Q 018144 287 IKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLV------DP-----TGQL------MSFVTSGLQVD-N----- 342 (360)
Q Consensus 287 ~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~------~~-----~g~~------~~~~t~~~~~~-g----- 342 (360)
.+.|..++. +++.+..+. .. .|.. ...++.+.... +
T Consensus 312 --------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~ 371 (397)
T 1sq9_A 312 --------------------DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGM 371 (397)
T ss_dssp --------------------TSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBST
T ss_pred --------------------CCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccc
Confidence 256777774 577777776 21 0000 23577777764 4
Q ss_pred -----EEEEEeCCCCeEEEEeC
Q 018144 343 -----HLYVISLTSNFIGKVQL 359 (360)
Q Consensus 343 -----~Lylgs~~~~~i~~~~l 359 (360)
++++..-....|..+++
T Consensus 372 ~~~~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 372 GADLNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp TCTTSCEEEEEETTTEEEEEEE
T ss_pred cccccceEEEecCCCcEEEEEc
Confidence 45555556777777765
No 163
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.07 E-value=0.00061 Score=63.10 Aligned_cols=166 Identities=11% Similarity=0.065 Sum_probs=98.8
Q ss_pred CCcceEEEcCCCC-EEEEecCCeEEEEE--CCeeeE-E-------------------------E-ecCCeEEEEeCCCcE
Q 018144 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVN-W-------------------------K-FIDSHLIICDNANGL 128 (360)
Q Consensus 79 ~~Pe~i~~d~~G~-l~v~~~~G~I~~~~--~g~~~~-~-------------------------~-~~~g~L~v~~~~~gl 128 (360)
....++++.++|. |++++.+|.|..++ +++... + . ..++.++++...+.+
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 229 (425)
T 1r5m_A 150 APIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAI 229 (425)
T ss_dssp SCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCE
T ss_pred ccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeE
Confidence 4556788888776 55666889898888 443211 1 0 124556666555556
Q ss_pred EEEc-CCC--eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC-
Q 018144 129 HKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD- 204 (360)
Q Consensus 129 ~~~~-~~g--~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~- 204 (360)
..++ .++ ...+. ... ..+..+++.++|...++- ...+.|..+|..+++......
T Consensus 230 ~~~d~~~~~~~~~~~-~~~----~~i~~~~~~~~~~~l~~~-----------------~~d~~i~i~d~~~~~~~~~~~~ 287 (425)
T 1r5m_A 230 FVYQITEKTPTGKLI-GHH----GPISVLEFNDTNKLLLSA-----------------SDDGTLRIWHGGNGNSQNCFYG 287 (425)
T ss_dssp EEEETTCSSCSEEEC-CCS----SCEEEEEEETTTTEEEEE-----------------ETTSCEEEECSSSBSCSEEECC
T ss_pred EEEEcCCCceeeeec-cCC----CceEEEEECCCCCEEEEE-----------------cCCCEEEEEECCCCccceEecC
Confidence 6677 444 33332 111 246788899999766642 235678888877665433322
Q ss_pred CCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEe
Q 018144 205 GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 271 (360)
Q Consensus 205 ~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 271 (360)
.......+++++++ .++.+. ..+.|..+++...+ ....+. ........+.++++|++.++..
T Consensus 288 ~~~~i~~~~~~~~~-~l~~~~-~d~~i~i~d~~~~~--~~~~~~-~~~~~i~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 288 HSQSIVSASWVGDD-KVISCS-MDGSVRLWSLKQNT--LLALSI-VDGVPIFAGRISQDGQKYAVAF 349 (425)
T ss_dssp CSSCEEEEEEETTT-EEEEEE-TTSEEEEEETTTTE--EEEEEE-CTTCCEEEEEECTTSSEEEEEE
T ss_pred CCccEEEEEECCCC-EEEEEe-CCCcEEEEECCCCc--EeEecc-cCCccEEEEEEcCCCCEEEEEE
Confidence 33456789999998 455444 56789999875422 112221 2223456788888887555443
No 164
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.06 E-value=0.0026 Score=58.30 Aligned_cols=169 Identities=11% Similarity=0.100 Sum_probs=95.2
Q ss_pred cceEEEcCCCCEEEEecC-------CeEEEEE---CC--------------eeeEEEe-cCCeEEEEeCCCcEEEEc-CC
Q 018144 81 PEDASMDKNGVIYTATRD-------GWIKRLQ---DG--------------TWVNWKF-IDSHLIICDNANGLHKVS-ED 134 (360)
Q Consensus 81 Pe~i~~d~~G~l~v~~~~-------G~I~~~~---~g--------------~~~~~~~-~~g~L~v~~~~~gl~~~~-~~ 134 (360)
-+++++.+||.+.++..+ +.+..++ .+ .+..+.+ .++.|..+..++-+..++ .+
T Consensus 33 v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~ 112 (344)
T 4gqb_B 33 LEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSGAVELWELDE 112 (344)
T ss_dssp EEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEETTSEEEEEEECT
T ss_pred EEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEECCCEEEEEeccC
Confidence 356788889988776643 2333332 11 1122222 356677776555455556 54
Q ss_pred C--eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-CcCcce
Q 018144 135 G--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANG 211 (360)
Q Consensus 135 g--~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-l~~png 211 (360)
+ ...+.....+. -..++.+++.++|+..++ +...+.|..+|..+++......+ ....+.
T Consensus 113 ~~~~~~~~~~~~~H-~~~V~~v~~spdg~~l~s-----------------gs~d~~i~iwd~~~~~~~~~~~~h~~~V~~ 174 (344)
T 4gqb_B 113 NETLIVSKFCKYEH-DDIVSTVSVLSSGTQAVS-----------------GSKDICIKVWDLAQQVVLSSYRAHAAQVTC 174 (344)
T ss_dssp TSSCEEEEEEEECC-SSCEEEEEECTTSSEEEE-----------------EETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCceeEeeccccCC-CCCEEEEEECCCCCEEEE-----------------EeCCCeEEEEECCCCcEEEEEcCcCCceEE
Confidence 4 33322111111 135788999999987775 23356788899888877554443 345678
Q ss_pred EEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCC-CCCceeEEcCC-CCEEEE
Q 018144 212 VALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLP-GAPDNINLAPD-GTFWIA 269 (360)
Q Consensus 212 ia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~-g~pd~i~~d~~-G~lwva 269 (360)
+++++++..++++.+..+.|..+|+...+. ...+..... ..+..+++.++ +++.++
T Consensus 175 ~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~l~s 232 (344)
T 4gqb_B 175 VAASPHKDSVFLSCSEDNRILLWDTRCPKP--ASQIGCSAPGYLPTSLAWHPQQSEVFVF 232 (344)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTSSSC--EEECC----CCCEEEEEECSSCTTEEEE
T ss_pred EEecCCCCCceeeeccccccccccccccce--eeeeecceeeccceeeeecCCCCcceEE
Confidence 999999865666666667788888754321 111211111 12445666664 455554
No 165
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.06 E-value=0.0018 Score=60.29 Aligned_cols=213 Identities=13% Similarity=0.066 Sum_probs=118.7
Q ss_pred EEcCCCCE-EEEecCCeEEEEE--CCeee-----------EEEe-cCC-eEEEEeCCCcEEEEc-CCC--eEEEeeccCC
Q 018144 85 SMDKNGVI-YTATRDGWIKRLQ--DGTWV-----------NWKF-IDS-HLIICDNANGLHKVS-EDG--VENFLSYVNG 145 (360)
Q Consensus 85 ~~d~~G~l-~v~~~~G~I~~~~--~g~~~-----------~~~~-~~g-~L~v~~~~~gl~~~~-~~g--~~~l~~~~~~ 145 (360)
++.++|.+ .+++.+|.|..++ +++.. .+.. +++ .|+.+..++.+..++ .++ ...+. ...
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~h~- 181 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI-GHR- 181 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE-CCS-
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc-CCC-
Confidence 44556654 4555888888887 34322 1222 234 355555555566677 555 44442 111
Q ss_pred ccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC--------------------
Q 018144 146 SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-------------------- 205 (360)
Q Consensus 146 ~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-------------------- 205 (360)
..+..+++.++|...++- ...+.|..+|..+++.......
T Consensus 182 ---~~v~~~~~~~~~~~l~s~-----------------~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 241 (420)
T 3vl1_A 182 ---ATVTDIAIIDRGRNVLSA-----------------SLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQ 241 (420)
T ss_dssp ---SCEEEEEEETTTTEEEEE-----------------ETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSS
T ss_pred ---CcEEEEEEcCCCCEEEEE-----------------cCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcce
Confidence 246788999999866652 2345677788776665443321
Q ss_pred -----CcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHH
Q 018144 206 -----FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMK 279 (360)
Q Consensus 206 -----l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~ 279 (360)
......++++++++.++.+. ..+.|..+++...+ ....+.....+....++++++|. +.++...
T Consensus 242 ~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~------- 311 (420)
T 3vl1_A 242 LHEISTSKKNNLEFGTYGKYVIAGH-VSGVITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAGYE------- 311 (420)
T ss_dssp CGGGCCCCCCTTCSSCTTEEEEEEE-TTSCEEEEETTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEEEET-------
T ss_pred eeecccCcccceEEcCCCCEEEEEc-CCCeEEEEECCCCc--eeEEcccccCCCceeEEEeCCCCCEEEEEeC-------
Confidence 12234466788887665555 45678888875421 11222212233456788899987 4444333
Q ss_pred HhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CC-cEEEEEeCCCCCcccceeeEEEECCEEEEEeCCCCeEEEE
Q 018144 280 ILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DG-TIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKV 357 (360)
Q Consensus 280 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g-~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~~~i~~~ 357 (360)
.+.|..+|. ++ ..+..+....+ ..++.+...++.+++..-....|..+
T Consensus 312 ---------------------------dg~i~vwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~l~s~~~d~~v~iw 361 (420)
T 3vl1_A 312 ---------------------------NGMLAQWDLRSPECPVGEFLINEG---TPINNVYFAAGALFVSSGFDTSIKLD 361 (420)
T ss_dssp ---------------------------TSEEEEEETTCTTSCSEEEEESTT---SCEEEEEEETTEEEEEETTTEEEEEE
T ss_pred ---------------------------CCeEEEEEcCCCcCchhhhhccCC---CCceEEEeCCCCEEEEecCCccEEEE
Confidence 256667774 33 33444543222 24566666677766666666666666
Q ss_pred eC
Q 018144 358 QL 359 (360)
Q Consensus 358 ~l 359 (360)
++
T Consensus 362 ~~ 363 (420)
T 3vl1_A 362 II 363 (420)
T ss_dssp EE
T ss_pred ec
Confidence 53
No 166
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.05 E-value=0.0052 Score=54.83 Aligned_cols=137 Identities=10% Similarity=0.090 Sum_probs=82.7
Q ss_pred CCcceEEEcCCCCEE-EEecCCeEEEEE--CCee-eEE------------EecCCeEEEEeCCCcEEEEc-CCC--eEEE
Q 018144 79 NHPEDASMDKNGVIY-TATRDGWIKRLQ--DGTW-VNW------------KFIDSHLIICDNANGLHKVS-EDG--VENF 139 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~-v~~~~G~I~~~~--~g~~-~~~------------~~~~g~L~v~~~~~gl~~~~-~~g--~~~l 139 (360)
..-.++++.++|.+. .++.+|.|..++ +++. ..+ ...+..|..+..++.+..++ .++ ...+
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~ 93 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF 93 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEE
Confidence 456788899888755 455889888888 4432 111 11223355555555566666 566 3333
Q ss_pred eeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCC-eEEEEeCC-CcCcceEEEec-
Q 018144 140 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-ITTLVADG-FYFANGVALSR- 216 (360)
Q Consensus 140 ~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg-~~~~~~~~-l~~pngia~~~- 216 (360)
. ... ..++.+++.+++.+.+| +...+.|..+|..++ .......+ ....+.++++|
T Consensus 94 ~-~h~----~~v~~~~~~~~~~~l~s-----------------gs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~ 151 (304)
T 2ynn_A 94 E-AHP----DYIRSIAVHPTKPYVLS-----------------GSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK 151 (304)
T ss_dssp E-CCS----SCEEEEEECSSSSEEEE-----------------EETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTT
T ss_pred e-CCC----CcEEEEEEcCCCCEEEE-----------------ECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCC
Confidence 2 111 34778999999987775 233567777886655 33333332 34567899998
Q ss_pred CCCEEEEEeCCCCEEEEEEecC
Q 018144 217 DEDYVVVCESWKFRCRKYWLKG 238 (360)
Q Consensus 217 dg~~l~v~~t~~~~i~~~~~~g 238 (360)
++. ++++....+.|..+++..
T Consensus 152 ~~~-~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 152 DPS-TFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp CTT-EEEEEETTSEEEEEETTC
T ss_pred CCC-EEEEEeCCCeEEEEECCC
Confidence 556 445555567888888743
No 167
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.04 E-value=0.0012 Score=61.32 Aligned_cols=224 Identities=9% Similarity=0.025 Sum_probs=126.1
Q ss_pred CcceEEEcCCCC-EEEEecCCeEEEEE-CC------eeeE----------EEe-cC-Ce-EEEEeCCCcEEEEc-CCCe-
Q 018144 80 HPEDASMDKNGV-IYTATRDGWIKRLQ-DG------TWVN----------WKF-ID-SH-LIICDNANGLHKVS-EDGV- 136 (360)
Q Consensus 80 ~Pe~i~~d~~G~-l~v~~~~G~I~~~~-~g------~~~~----------~~~-~~-g~-L~v~~~~~gl~~~~-~~g~- 136 (360)
...++++.++|. |.+++.+|.|..++ .. .... +.. ++ ++ |+.+..++.+..++ .++.
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 148 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTE 148 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSS
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcc
Confidence 456788888775 55566889888887 32 1111 111 12 33 44444334455555 3221
Q ss_pred -----EEEeeccCCccccccccEEEcCC-CcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-----
Q 018144 137 -----ENFLSYVNGSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG----- 205 (360)
Q Consensus 137 -----~~l~~~~~~~~~~~~n~l~~d~d-G~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~----- 205 (360)
..+...........+..+++.++ +.++++- ...+.|..+|..+++.......
T Consensus 149 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-----------------~~dg~v~iwd~~~~~~~~~~~~~~~~~ 211 (416)
T 2pm9_A 149 SPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASA-----------------GSSNFASIWDLKAKKEVIHLSYTSPNS 211 (416)
T ss_dssp CTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEE-----------------SSSSCEEEEETTTTEEEEEECCCCCSS
T ss_pred ccccccccccccccCCCCCeeEEEeCCCCCcEEEEE-----------------cCCCCEEEEECCCCCcceEEecccccc
Confidence 11111000011235788999998 5777652 2356788899887766544332
Q ss_pred --CcCcceEEEecCCCEEEEEeCCCC---EEEEEEecCCcCcceeeeccCCCCCCceeEEcC-CCCEEEEEecCchhHHH
Q 018144 206 --FYFANGVALSRDEDYVVVCESWKF---RCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMK 279 (360)
Q Consensus 206 --l~~pngia~~~dg~~l~v~~t~~~---~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~-~G~lwva~~~~~~~~~~ 279 (360)
....+.+++++++..++++....+ .|..+++..... ....+..........+++.+ +|++.++...
T Consensus 212 ~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~------- 283 (416)
T 2pm9_A 212 GIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGR------- 283 (416)
T ss_dssp CCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEES-------
T ss_pred ccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeC-------
Confidence 345678999999743444444444 788888764211 11111101223456788887 7765555443
Q ss_pred HhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEEC-C-EEEEEeCCCCeEEE
Q 018144 280 ILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVD-N-HLYVISLTSNFIGK 356 (360)
Q Consensus 280 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~-g-~Lylgs~~~~~i~~ 356 (360)
.+.|..+|. +++.+..+....+ .++.+.... + .+++..-....|..
T Consensus 284 ---------------------------dg~v~~wd~~~~~~~~~~~~~~~----~v~~~~~s~~~~~~l~s~~~d~~i~i 332 (416)
T 2pm9_A 284 ---------------------------DNTVLLWNPESAEQLSQFPARGN----WCFKTKFAPEAPDLFACASFDNKIEV 332 (416)
T ss_dssp ---------------------------SSEEEEECSSSCCEEEEEECSSS----CCCCEEECTTCTTEEEECCSSSEEEE
T ss_pred ---------------------------CCCEEEeeCCCCccceeecCCCC----ceEEEEECCCCCCEEEEEecCCcEEE
Confidence 256777784 5777777765433 456666653 4 56666556677777
Q ss_pred EeC
Q 018144 357 VQL 359 (360)
Q Consensus 357 ~~l 359 (360)
+++
T Consensus 333 w~~ 335 (416)
T 2pm9_A 333 QTL 335 (416)
T ss_dssp EES
T ss_pred EEc
Confidence 765
No 168
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.03 E-value=0.00046 Score=67.86 Aligned_cols=130 Identities=13% Similarity=0.078 Sum_probs=80.9
Q ss_pred EEEEeCCCcEEEEc-CCC-eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCC
Q 018144 119 LIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS 196 (360)
Q Consensus 119 L~v~~~~~gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t 196 (360)
+|++....++..++ .+| .+.+.... ..++++++||+.+++-+. .......|+.+|.++
T Consensus 125 ~~~s~~~~~~~l~d~~~g~~~~l~~~~-------~~~~~~spDG~~la~~~~-------------~~~~~~~i~~~d~~~ 184 (582)
T 3o4h_A 125 VFTGATEDRVALYALDGGGLRELARLP-------GFGFVSDIRGDLIAGLGF-------------FGGGRVSLFTSNLSS 184 (582)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEES-------SCEEEEEEETTEEEEEEE-------------EETTEEEEEEEETTT
T ss_pred EEEecCCCCceEEEccCCcEEEeecCC-------CceEEECCCCCEEEEEEE-------------cCCCCeEEEEEcCCC
Confidence 45555455666667 666 55543221 167889999975553211 011125699999988
Q ss_pred CeEEEEeCCCcCcceEEEecCCCEEEEEeCCC-CEEEEEEecCCcCcceeeeccCCCCCCceeE--------EcCCCCEE
Q 018144 197 NITTLVADGFYFANGVALSRDEDYVVVCESWK-FRCRKYWLKGERKGKLETFAENLPGAPDNIN--------LAPDGTFW 267 (360)
Q Consensus 197 g~~~~~~~~l~~pngia~~~dg~~l~v~~t~~-~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~--------~d~~G~lw 267 (360)
++.+.+.......+.++++|||+.++.++..+ ..|++++.++.+ ...+ ......+.++. +++||.++
T Consensus 185 g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~spdg~~~ 260 (582)
T 3o4h_A 185 GGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS---VEDL-ELPSKDFSSYRPTAITWLGYLPDGRLA 260 (582)
T ss_dssp CCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC---EEEC-CCSCSHHHHHCCSEEEEEEECTTSCEE
T ss_pred CCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc---EEEc-cCCCcChhhhhhccccceeEcCCCcEE
Confidence 88887755545568899999999888665533 278899886543 2222 12222234455 89999887
Q ss_pred EEEec
Q 018144 268 IAIIK 272 (360)
Q Consensus 268 va~~~ 272 (360)
++...
T Consensus 261 ~~~~~ 265 (582)
T 3o4h_A 261 VVARR 265 (582)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 76654
No 169
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=98.03 E-value=0.00025 Score=66.48 Aligned_cols=204 Identities=12% Similarity=0.087 Sum_probs=111.3
Q ss_pred EcCCCCEEEEecCCeEEEEE-C--C-eeeE------------EE-ec--CCeEEEEeCCC----cEEEEcCCC--eEEEe
Q 018144 86 MDKNGVIYTATRDGWIKRLQ-D--G-TWVN------------WK-FI--DSHLIICDNAN----GLHKVSEDG--VENFL 140 (360)
Q Consensus 86 ~d~~G~l~v~~~~G~I~~~~-~--g-~~~~------------~~-~~--~g~L~v~~~~~----gl~~~~~~g--~~~l~ 140 (360)
.|++|.||+|+..| +++++ + | .++. +. ++ .++||++.... ||++.+..| .+.+.
T Consensus 19 ~d~~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~ 97 (394)
T 3b7f_A 19 ESGPVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEAT 97 (394)
T ss_dssp CCSCCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECS
T ss_pred CCCCCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECC
Confidence 56688999999765 77766 3 2 3332 12 22 57899987654 688776545 44442
Q ss_pred ec--cCCc-------cccccccEEEcC---CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC---
Q 018144 141 SY--VNGS-------KLRFANDVVEAS---DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--- 205 (360)
Q Consensus 141 ~~--~~~~-------~~~~~n~l~~d~---dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~--- 205 (360)
.. .... ....+..|++++ .++||+.. ..++|++.+......+.+...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~------------------~~ggl~~S~DgG~tW~~~~~~~~~ 159 (394)
T 3b7f_A 98 RPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGT------------------SPQGLFRSTDHGASWEPVAGFNDH 159 (394)
T ss_dssp BCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEE------------------ETTEEEEESSTTSBCEECHHHHTC
T ss_pred ccccCCCcccccccccccceeEEEeCCCCCCCEEEEEe------------------cCCcEEEEcCCCCCeEECcCccCC
Confidence 21 1111 112344678885 67899942 246799987654455543210
Q ss_pred --------------C--cCcceEEEec-CCCEEEEEeCCCCEEEEEEecCCcCcceeeeccC-----CC------C-CCc
Q 018144 206 --------------F--YFANGVALSR-DEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN-----LP------G-APD 256 (360)
Q Consensus 206 --------------l--~~pngia~~~-dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~-----~~------g-~pd 256 (360)
. .....|++++ +.+.+|++... +.|++.+-.|.. .+.+... ++ + ...
T Consensus 160 p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-ggl~~s~DgG~t---W~~~~~~~~~~~~p~~~~~~g~~~~ 235 (394)
T 3b7f_A 160 PMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-GGVFESTDAGTD---WKPLNRGCAANFLPDPNVEFGHDPH 235 (394)
T ss_dssp TTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET-BEEEEESSTTSS---CEECCTTCCCTTSSSSSSSSCBCEE
T ss_pred ccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC-CCEEEECCCCCC---ceECCCCccccccCCCccccCccee
Confidence 0 1123677886 33457877543 457776533322 2222111 11 0 123
Q ss_pred eeEEcCC--CCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeC--CCCCccc
Q 018144 257 NINLAPD--GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVD--PTGQLMS 332 (360)
Q Consensus 257 ~i~~d~~--G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~--~~g~~~~ 332 (360)
.|+++++ +.+|++... +|++.+..|+..+.+.. +.+. ..
T Consensus 236 ~i~~~~~~~~~l~vg~~~------------------------------------gl~~s~D~G~tW~~~~~~l~~~~-~~ 278 (394)
T 3b7f_A 236 CVVQHPAAPDILYQQNHC------------------------------------GIYRMDRREGVWKRIGDAMPREV-GD 278 (394)
T ss_dssp EEEECSSSTTEEEEEETT------------------------------------EEEEEETTTTEEECGGGGSCTTT-CS
T ss_pred EEEECCCCCCEEEEEcCC------------------------------------eEEEeCCCCCcceECCCCCCCCC-cc
Confidence 5677875 789998754 68887777776655432 1110 02
Q ss_pred ceeeEEEE---CCEEEEEeC
Q 018144 333 FVTSGLQV---DNHLYVISL 349 (360)
Q Consensus 333 ~~t~~~~~---~g~Lylgs~ 349 (360)
....+..+ .+.||+++.
T Consensus 279 ~~~~i~~~p~~~~~l~~~t~ 298 (394)
T 3b7f_A 279 IGFPIVVHQRDPRTVWVFPM 298 (394)
T ss_dssp CEEEEEECSSCTTCEEEEEC
T ss_pred ceEEEEECCCCCCEEEEEec
Confidence 23345553 478998863
No 170
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.02 E-value=0.0064 Score=53.62 Aligned_cols=213 Identities=13% Similarity=0.090 Sum_probs=122.6
Q ss_pred CCcceEEEcCCCCE-EEEecCCeEEEEE--CC---e-----------eeEEEecCCeEEEEeCCCcEEEEcCCC-eEEEe
Q 018144 79 NHPEDASMDKNGVI-YTATRDGWIKRLQ--DG---T-----------WVNWKFIDSHLIICDNANGLHKVSEDG-VENFL 140 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l-~v~~~~G~I~~~~--~g---~-----------~~~~~~~~g~L~v~~~~~gl~~~~~~g-~~~l~ 140 (360)
....++++.+++.+ ++++.+|.|..++ +. + +..+...++.|+.+..++.+..++... ...+.
T Consensus 60 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 139 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWKEGSLVYNLQ 139 (313)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTEEEEEEE
T ss_pred ccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEcCCcEEEecc
Confidence 45667888887764 5556888887776 21 1 122333345555655555455555222 22221
Q ss_pred eccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC-CCcCcceEEEecCC
Q 018144 141 SYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-GFYFANGVALSRDE 218 (360)
Q Consensus 141 ~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~-~l~~pngia~~~dg 218 (360)
... ..+..+.+.+ ++...++ +...+.|..+|.. .....+.. .......+++++++
T Consensus 140 -~~~----~~v~~~~~~~~~~~~l~~-----------------~~~d~~i~i~d~~-~~~~~~~~~~~~~i~~~~~~~~~ 196 (313)
T 3odt_A 140 -AHN----ASVWDAKVVSFSENKFLT-----------------ASADKTIKLWQND-KVIKTFSGIHNDVVRHLAVVDDG 196 (313)
T ss_dssp -CCS----SCEEEEEEEETTTTEEEE-----------------EETTSCEEEEETT-EEEEEECSSCSSCEEEEEEEETT
T ss_pred -cCC----CceeEEEEccCCCCEEEE-----------------EECCCCEEEEecC-ceEEEEeccCcccEEEEEEcCCC
Confidence 111 2345666655 6665554 2235678888843 22222322 34456789999998
Q ss_pred CEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccc
Q 018144 219 DYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLF 298 (360)
Q Consensus 219 ~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 298 (360)
. ++.+. ..+.|..+++...+ ....+. ...+....++++++|.+..+...
T Consensus 197 ~-~~~~~-~dg~i~i~d~~~~~--~~~~~~-~~~~~i~~~~~~~~~~l~~~~~d-------------------------- 245 (313)
T 3odt_A 197 H-FISCS-NDGLIKLVDMHTGD--VLRTYE-GHESFVYCIKLLPNGDIVSCGED-------------------------- 245 (313)
T ss_dssp E-EEEEE-TTSEEEEEETTTCC--EEEEEE-CCSSCEEEEEECTTSCEEEEETT--------------------------
T ss_pred e-EEEcc-CCCeEEEEECCchh--hhhhhh-cCCceEEEEEEecCCCEEEEecC--------------------------
Confidence 6 54444 46789999875321 122222 23334667889999976666544
Q ss_pred cccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCCeEEEEeC
Q 018144 299 SQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 299 ~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~~~l 359 (360)
+.|..+|. +++....+....+ .++.+... ++++..++ ....|..+++
T Consensus 246 ---------g~v~iwd~~~~~~~~~~~~~~~----~i~~~~~~~~~~~~~~~-~dg~i~iw~~ 294 (313)
T 3odt_A 246 ---------RTVRIWSKENGSLKQVITLPAI----SIWSVDCMSNGDIIVGS-SDNLVRIFSQ 294 (313)
T ss_dssp ---------SEEEEECTTTCCEEEEEECSSS----CEEEEEECTTSCEEEEE-TTSCEEEEES
T ss_pred ---------CEEEEEECCCCceeEEEeccCc----eEEEEEEccCCCEEEEe-CCCcEEEEeC
Confidence 57888884 6788877766543 46667665 46655544 4666777665
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.99 E-value=0.0004 Score=64.07 Aligned_cols=140 Identities=9% Similarity=-0.065 Sum_probs=80.0
Q ss_pred eEEEcCCCC-EEEEecCCeEEEEE--CCeeeEEE--------------ecCCeEEEEe----------------------
Q 018144 83 DASMDKNGV-IYTATRDGWIKRLQ--DGTWVNWK--------------FIDSHLIICD---------------------- 123 (360)
Q Consensus 83 ~i~~d~~G~-l~v~~~~G~I~~~~--~g~~~~~~--------------~~~g~L~v~~---------------------- 123 (360)
++++.++|. |+++..++.|++++ +++...+. ..+++++++.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFT 164 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGG
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhcc
Confidence 457888874 66676777899998 45433211 2234433321
Q ss_pred -CCCcEEEEc-CCC-eEEEeeccCCccccccccEEEcC-CCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCe
Q 018144 124 -NANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEAS-DGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI 198 (360)
Q Consensus 124 -~~~gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~-dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~ 198 (360)
....|+.++ .+| .+.+.... ..+.++.+++ ||. |.++.... . ......|+.+|.++++
T Consensus 165 ~~~~~l~~~d~~~g~~~~l~~~~-----~~~~~~~~sp~dg~~l~~~~~~~-~-----------~~~~~~l~~~d~~~~~ 227 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGESTVILQEN-----QWLGHPIYRPYDDSTVAFCHEGP-H-----------DLVDARMWLINEDGTN 227 (388)
T ss_dssp CCCEEEEEEETTTCCEEEEEEES-----SCEEEEEEETTEEEEEEEEECSC-T-----------TTSSCSEEEEETTSCC
T ss_pred CCcceEEEEECCCCceEEeecCC-----ccccccEECCCCCCEEEEEEecC-C-----------CCCcceEEEEeCCCCc
Confidence 113577777 566 55553221 2356788999 885 43432110 0 0113479999987776
Q ss_pred EEEEeCCC--cCcceEEEecCCCEE-EEEeCCCC---EEEEEEecCC
Q 018144 199 TTLVADGF--YFANGVALSRDEDYV-VVCESWKF---RCRKYWLKGE 239 (360)
Q Consensus 199 ~~~~~~~l--~~pngia~~~dg~~l-~v~~t~~~---~i~~~~~~g~ 239 (360)
.+.+.... ......+++|||+.| |++...+. .|+++++++.
T Consensus 228 ~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (388)
T 3pe7_A 228 MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETL 274 (388)
T ss_dssp CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTC
T ss_pred eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCC
Confidence 66554432 124467899999866 44543322 3889988654
No 172
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.97 E-value=0.0047 Score=57.82 Aligned_cols=137 Identities=11% Similarity=0.140 Sum_probs=81.9
Q ss_pred CCcceEEEcCCCCEE-EEecCCeEEEEE--CCeee-----------EEEe-cCCe-EEEEeCCCcEEEEc-CCC--eEEE
Q 018144 79 NHPEDASMDKNGVIY-TATRDGWIKRLQ--DGTWV-----------NWKF-IDSH-LIICDNANGLHKVS-EDG--VENF 139 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~-v~~~~G~I~~~~--~g~~~-----------~~~~-~~g~-L~v~~~~~gl~~~~-~~g--~~~l 139 (360)
....++++.+++.+. .|+.+|.|..++ +++.. .+.. ++|. |..+..++-+..++ .++ +..+
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~ 188 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM 188 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECC
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE
Confidence 345678888887655 445889998888 45322 1221 2343 33444444444455 333 2222
Q ss_pred eeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEE-eCCCcCcceEEEecCC
Q 018144 140 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDE 218 (360)
Q Consensus 140 ~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~-~~~l~~pngia~~~dg 218 (360)
.+. ...+..+++.++|...++ +...+.|..+|..+++.... .......+.+++++|+
T Consensus 189 ----~~h-~~~V~~v~~~p~~~~l~s-----------------~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g 246 (410)
T 1vyh_C 189 ----HGH-DHNVSSVSIMPNGDHIVS-----------------ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246 (410)
T ss_dssp ----CCC-SSCEEEEEECSSSSEEEE-----------------EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred ----cCC-CCCEEEEEEeCCCCEEEE-----------------EeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCC
Confidence 111 134678899999987775 33467888899887765433 2223456788999999
Q ss_pred CEEEEEeCCCCEEEEEEecC
Q 018144 219 DYVVVCESWKFRCRKYWLKG 238 (360)
Q Consensus 219 ~~l~v~~t~~~~i~~~~~~g 238 (360)
+.++.+. ..+.|..+++..
T Consensus 247 ~~l~s~s-~D~~v~vwd~~~ 265 (410)
T 1vyh_C 247 TLIASCS-NDQTVRVWVVAT 265 (410)
T ss_dssp SEEEEEE-TTSCEEEEETTT
T ss_pred CEEEEEc-CCCeEEEEECCC
Confidence 8555554 456788887653
No 173
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.95 E-value=0.0015 Score=60.09 Aligned_cols=164 Identities=11% Similarity=0.093 Sum_probs=93.0
Q ss_pred cceEEEcCCCCEEEEecCCeEEEEE--CCe---------------eeEEEe-cCCe-EEEEeCCCcEEEEc-CCC--eEE
Q 018144 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGT---------------WVNWKF-IDSH-LIICDNANGLHKVS-EDG--VEN 138 (360)
Q Consensus 81 Pe~i~~d~~G~l~v~~~~G~I~~~~--~g~---------------~~~~~~-~~g~-L~v~~~~~gl~~~~-~~g--~~~ 138 (360)
-.++++.+++.+.+++.+|.|..++ +++ +..+.. ++|+ |..+..++-+..++ .++ ...
T Consensus 97 V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~ 176 (357)
T 4g56_B 97 VTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKS 176 (357)
T ss_dssp EEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 4568888999999988889887766 332 111222 2444 44455445566667 566 333
Q ss_pred EeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC---CCcCcceEEE
Q 018144 139 FLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD---GFYFANGVAL 214 (360)
Q Consensus 139 l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~---~l~~pngia~ 214 (360)
+. .. ...++.+++.+++. ++++- ...+.|..+|..+++...... ....+..+++
T Consensus 177 ~~-~h----~~~v~~v~~s~~~~~~~~s~-----------------~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~ 234 (357)
T 4g56_B 177 YN-AH----SSEVNCVAACPGKDTIFLSC-----------------GEDGRILLWDTRKPKPATRIDFCASDTIPTSVTW 234 (357)
T ss_dssp EC-CC----SSCEEEEEECTTCSSCEEEE-----------------ETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEE
T ss_pred Ec-CC----CCCEEEEEEccCCCceeeee-----------------ccCCceEEEECCCCceeeeeeeccccccccchhh
Confidence 31 11 13467788887773 55542 235678888887665433221 1234678999
Q ss_pred ecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEE
Q 018144 215 SRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIA 269 (360)
Q Consensus 215 ~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva 269 (360)
+|++..++++....+.|..+++...+. ...+. ........+++.++|.-+++
T Consensus 235 sp~~~~~la~g~~d~~i~~wd~~~~~~--~~~~~-~~~~~v~~l~~sp~~~~~la 286 (357)
T 4g56_B 235 HPEKDDTFACGDETGNVSLVNIKNPDS--AQTSA-VHSQNITGLAYSYHSSPFLA 286 (357)
T ss_dssp CTTSTTEEEEEESSSCEEEEESSCGGG--CEEEC-CCSSCEEEEEECSSSSCCEE
T ss_pred hhcccceEEEeecccceeEEECCCCcE--eEEEe-ccceeEEEEEEcCCCCCEEE
Confidence 998655666655567788888754321 22221 12223456788888754443
No 174
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.95 E-value=0.0053 Score=57.46 Aligned_cols=216 Identities=13% Similarity=0.095 Sum_probs=123.8
Q ss_pred CcceEEEcCCCCEE-EEecCCeEEEEE--CCe-----------eeEEEe-cCC-eEEEEeCCCcEEEEc-CCC--eEEEe
Q 018144 80 HPEDASMDKNGVIY-TATRDGWIKRLQ--DGT-----------WVNWKF-IDS-HLIICDNANGLHKVS-EDG--VENFL 140 (360)
Q Consensus 80 ~Pe~i~~d~~G~l~-v~~~~G~I~~~~--~g~-----------~~~~~~-~~g-~L~v~~~~~gl~~~~-~~g--~~~l~ 140 (360)
.-.++++.++|.+. .++.+|.|..++ +++ +..+.. +++ .|..++.++-+..++ .++ ...+.
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~ 231 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 34678888887655 455888887777 332 112222 234 355555555566666 666 33332
Q ss_pred eccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC-CCcCcceEEEecC--
Q 018144 141 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-GFYFANGVALSRD-- 217 (360)
Q Consensus 141 ~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~-~l~~pngia~~~d-- 217 (360)
. .. ..++.+.+.++|.+.++- ...+.|..+|..+++...... .....+.++++|+
T Consensus 232 ~-h~----~~v~~~~~~~~g~~l~s~-----------------s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 289 (410)
T 1vyh_C 232 G-HR----EWVRMVRPNQDGTLIASC-----------------SNDQTVRVWVVATKECKAELREHRHVVECISWAPESS 289 (410)
T ss_dssp C-CS----SCEEEEEECTTSSEEEEE-----------------ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCG
T ss_pred C-CC----ccEEEEEECCCCCEEEEE-----------------cCCCeEEEEECCCCceeeEecCCCceEEEEEEcCccc
Confidence 1 11 246678888999877762 235678888877776544332 2334567788775
Q ss_pred ------------------CCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHH
Q 018144 218 ------------------EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMK 279 (360)
Q Consensus 218 ------------------g~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~ 279 (360)
+. ++++.+..+.|..+++.... ....+. ...+....+.++++|.+.++...
T Consensus 290 ~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~~~~--~~~~~~-~h~~~v~~v~~~~~g~~l~s~s~------- 358 (410)
T 1vyh_C 290 YSSISEATGSETKKSGKPGP-FLLSGSRDKTIKMWDVSTGM--CLMTLV-GHDNWVRGVLFHSGGKFILSCAD------- 358 (410)
T ss_dssp GGGGGGCCSCC-------CC-EEEEEETTSEEEEEETTTTE--EEEEEE-CCSSCEEEEEECSSSSCEEEEET-------
T ss_pred ccchhhhccccccccCCCCC-EEEEEeCCCeEEEEECCCCc--eEEEEE-CCCCcEEEEEEcCCCCEEEEEeC-------
Confidence 44 44454556778888875321 112222 22234567888999976555443
Q ss_pred HhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEEC-CEEEEEeCCCCeEEEE
Q 018144 280 ILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVD-NHLYVISLTSNFIGKV 357 (360)
Q Consensus 280 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~-g~Lylgs~~~~~i~~~ 357 (360)
.+.|..+|. .++.+..+.... ..++++.... +.+.+..-....|.++
T Consensus 359 ---------------------------D~~i~vwd~~~~~~~~~~~~h~----~~v~~l~~~~~~~~l~sgs~D~~i~vW 407 (410)
T 1vyh_C 359 ---------------------------DKTLRVWDYKNKRCMKTLNAHE----HFVTSLDFHKTAPYVVTGSVDQTVKVW 407 (410)
T ss_dssp ---------------------------TTEEEEECCTTSCCCEEEECCS----SCEEEEEECSSSSCEEEEETTSEEEEE
T ss_pred ---------------------------CCeEEEEECCCCceEEEEcCCC----CcEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 246777774 566666665433 3577777764 4444444445566665
Q ss_pred eC
Q 018144 358 QL 359 (360)
Q Consensus 358 ~l 359 (360)
++
T Consensus 408 ~~ 409 (410)
T 1vyh_C 408 EC 409 (410)
T ss_dssp C-
T ss_pred eC
Confidence 54
No 175
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.95 E-value=0.009 Score=60.71 Aligned_cols=169 Identities=11% Similarity=0.102 Sum_probs=97.5
Q ss_pred CCcceEEEcCCCCE-EEEecCCeEEEEE--CCeee-E------------EEecCCeEEEEeCCCcEEEEc-CCC--eEEE
Q 018144 79 NHPEDASMDKNGVI-YTATRDGWIKRLQ--DGTWV-N------------WKFIDSHLIICDNANGLHKVS-EDG--VENF 139 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l-~v~~~~G~I~~~~--~g~~~-~------------~~~~~g~L~v~~~~~gl~~~~-~~g--~~~l 139 (360)
....++++.++|.. .+++.+|.|..++ +++.. . |...+..|.+++.++.+..++ .++ ...+
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 93 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF 93 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 45678899988864 4555888888888 44321 1 111233466666555566667 566 3333
Q ss_pred eeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCC-eEEEEe-CCCcCcceEEEec-
Q 018144 140 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-ITTLVA-DGFYFANGVALSR- 216 (360)
Q Consensus 140 ~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg-~~~~~~-~~l~~pngia~~~- 216 (360)
. ... ..+..+++.++|...++ +...|.|..+|..++ ...... ........++++|
T Consensus 94 ~-~~~----~~v~~~~~s~~~~~l~~-----------------~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~ 151 (814)
T 3mkq_A 94 E-AHP----DYIRSIAVHPTKPYVLS-----------------GSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK 151 (814)
T ss_dssp E-CCS----SCEEEEEECSSSSEEEE-----------------EETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETT
T ss_pred e-cCC----CCEEEEEEeCCCCEEEE-----------------EcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcC
Confidence 2 111 24678899999975554 223567888887655 333322 2334567899999
Q ss_pred CCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcC--CCCEEEEEec
Q 018144 217 DEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAP--DGTFWIAIIK 272 (360)
Q Consensus 217 dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~--~G~lwva~~~ 272 (360)
+++.++ +.+..+.|..+++..... ...+..........+.+.+ +|.+.++...
T Consensus 152 ~~~~l~-~~~~dg~v~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 206 (814)
T 3mkq_A 152 DPSTFA-SGCLDRTVKVWSLGQSTP--NFTLTTGQERGVNYVDYYPLPDKPYMITASD 206 (814)
T ss_dssp EEEEEE-EEETTSEEEEEETTCSSC--SEEEECCCTTCCCEEEECCSTTCCEEEEECT
T ss_pred CCCEEE-EEeCCCeEEEEECCCCcc--eeEEecCCCCCEEEEEEEECCCCCEEEEEeC
Confidence 666444 444567898888754321 1122212223355677766 7765554433
No 176
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.94 E-value=0.0024 Score=58.80 Aligned_cols=170 Identities=10% Similarity=0.038 Sum_probs=100.4
Q ss_pred CCcceEEEcCCC--CEEEEecCCeEEEEE--CCeee-------------EEEec--CCe-EEEEeCCCcEEEEc-CCC-e
Q 018144 79 NHPEDASMDKNG--VIYTATRDGWIKRLQ--DGTWV-------------NWKFI--DSH-LIICDNANGLHKVS-EDG-V 136 (360)
Q Consensus 79 ~~Pe~i~~d~~G--~l~v~~~~G~I~~~~--~g~~~-------------~~~~~--~g~-L~v~~~~~gl~~~~-~~g-~ 136 (360)
..-.++++.++| .|.+++.+|.|..++ +++.. .+... +++ |+.+..++.+..++ .++ .
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 153 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVI 153 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEE
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCce
Confidence 456678888887 456666899888888 33221 12221 223 44455444455566 444 4
Q ss_pred EEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEec
Q 018144 137 ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSR 216 (360)
Q Consensus 137 ~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~ 216 (360)
..+.... + ....+..+++.++|...++ +...+.|..+|........+.........+++++
T Consensus 154 ~~~~~~~-~-~~~~v~~~~~~~~~~~l~~-----------------~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~ 214 (383)
T 3ei3_B 154 QVFAKTD-S-WDYWYCCVDVSVSRQMLAT-----------------GDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNP 214 (383)
T ss_dssp EEEECCC-C-SSCCEEEEEEETTTTEEEE-----------------EETTSEEEEEETTSCEEEEEECSSSCEEEEEECS
T ss_pred EEEeccC-C-CCCCeEEEEECCCCCEEEE-----------------ECCCCCEEEEECCCCEEEEeccCCCcEEEEEECC
Confidence 4442211 1 0134678899999986665 2345788899986444444444445678999999
Q ss_pred CCC-EEEEEeCCCCEEEEEEecCCcC-cce-eeeccCCCCCCceeEEcC-CCCEEEEE
Q 018144 217 DED-YVVVCESWKFRCRKYWLKGERK-GKL-ETFAENLPGAPDNINLAP-DGTFWIAI 270 (360)
Q Consensus 217 dg~-~l~v~~t~~~~i~~~~~~g~~~-~~~-~~~~~~~~g~pd~i~~d~-~G~lwva~ 270 (360)
+++ .++.+. ..+.|..+++...+. ... ..+ ...+....+.+++ +|++.++.
T Consensus 215 ~~~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~ 269 (383)
T 3ei3_B 215 RCDWLMATSS-VDATVKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTT 269 (383)
T ss_dssp SCTTEEEEEE-TTSEEEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEE
T ss_pred CCCCEEEEEe-CCCEEEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEE
Confidence 998 454444 467888898864221 111 222 1333466788888 88755543
No 177
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.94 E-value=0.0096 Score=52.97 Aligned_cols=137 Identities=15% Similarity=0.132 Sum_probs=83.9
Q ss_pred CCcceEEEcCCCCEE-EEecCCeEEEEE--CCeee-EE----------Ee-cCC-eEEEEeCCCcEEEEc-CCC--eEEE
Q 018144 79 NHPEDASMDKNGVIY-TATRDGWIKRLQ--DGTWV-NW----------KF-IDS-HLIICDNANGLHKVS-EDG--VENF 139 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~-v~~~~G~I~~~~--~g~~~-~~----------~~-~~g-~L~v~~~~~gl~~~~-~~g--~~~l 139 (360)
..-.++++.++|.+. +++.+|.|..++ +++.. .+ .. +++ .|+.+..++.+..++ .++ ...+
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 145 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 145 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEe
Confidence 455678888887655 455888888888 44321 11 11 233 344555555566677 555 3333
Q ss_pred eeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe-C-CCcCcceEEEecC
Q 018144 140 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-D-GFYFANGVALSRD 217 (360)
Q Consensus 140 ~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~-~-~l~~pngia~~~d 217 (360)
.. .. ..+..+++.++|.+.++ +...+.|..+|..+++..... . .......++++++
T Consensus 146 ~~-~~----~~v~~~~~~~~~~~l~~-----------------~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (312)
T 4ery_A 146 PA-HS----DPVSAVHFNRDGSLIVS-----------------SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 203 (312)
T ss_dssp CC-CS----SCEEEEEECTTSSEEEE-----------------EETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTT
T ss_pred cC-CC----CcEEEEEEcCCCCEEEE-----------------EeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCC
Confidence 11 11 23677889999987665 223567888998776653322 2 2234567899999
Q ss_pred CCEEEEEeCCCCEEEEEEecC
Q 018144 218 EDYVVVCESWKFRCRKYWLKG 238 (360)
Q Consensus 218 g~~l~v~~t~~~~i~~~~~~g 238 (360)
++.++.+.. .+.|..|++..
T Consensus 204 ~~~l~~~~~-d~~i~iwd~~~ 223 (312)
T 4ery_A 204 GKYILAATL-DNTLKLWDYSK 223 (312)
T ss_dssp SSEEEEEET-TTEEEEEETTT
T ss_pred CCEEEEEcC-CCeEEEEECCC
Confidence 986666554 57888888754
No 178
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.92 E-value=0.0061 Score=56.02 Aligned_cols=226 Identities=12% Similarity=0.009 Sum_probs=118.6
Q ss_pred CCcceEEEcCCCCEEEEecCCeEEEEE--CCe-------eeEE----------E-ecC----C---e-EEEEeCCCcEEE
Q 018144 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DGT-------WVNW----------K-FID----S---H-LIICDNANGLHK 130 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v~~~~G~I~~~~--~g~-------~~~~----------~-~~~----g---~-L~v~~~~~gl~~ 130 (360)
..-.++++++ ..|.+++.+|.|..++ +++ ...+ . ..+ + + |+.+..++.+..
T Consensus 17 ~~i~~~~~~~-~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~i 95 (397)
T 1sq9_A 17 ADIFSVSACN-SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLF 95 (397)
T ss_dssp SCEEEEEECS-SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEE
T ss_pred cCeEEEEecC-CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEE
Confidence 3456677776 6677777888888887 333 2221 1 123 4 4 444444444555
Q ss_pred Ec-CCC-e--EEEeeccCCcc----ccccccEEEc----CCCcE-EEEeCCCCCCCccceecccccCCccEEEEEcCCC-
Q 018144 131 VS-EDG-V--ENFLSYVNGSK----LRFANDVVEA----SDGSL-YFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS- 196 (360)
Q Consensus 131 ~~-~~g-~--~~l~~~~~~~~----~~~~n~l~~d----~dG~l-~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t- 196 (360)
++ .++ . ........... ...+..+++. ++|.. .++- ...|.|..+|..+
T Consensus 96 w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-----------------~~dg~i~iwd~~~~ 158 (397)
T 1sq9_A 96 YRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVAT-----------------DVKGTTYIWKFHPF 158 (397)
T ss_dssp EEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEE-----------------ETTSCEEEEEEESS
T ss_pred EEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEE-----------------eCCCcEEEEeCCcc
Confidence 55 333 2 11111111110 1357788898 88876 5542 2245666666544
Q ss_pred -----Ce-EE-----EE-------eCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccC---C---C
Q 018144 197 -----NI-TT-----LV-------ADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN---L---P 252 (360)
Q Consensus 197 -----g~-~~-----~~-------~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~---~---~ 252 (360)
++ +. .+ .........+++++++ .++ +....+.|..|++...+ ....+. . . .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~-~~~~dg~i~i~d~~~~~--~~~~~~-~~~~h~~~~ 233 (397)
T 1sq9_A 159 ADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIA-TGFNNGTVQISELSTLR--PLYNFE-SQHSMINNS 233 (397)
T ss_dssp SSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEE-EECTTSEEEEEETTTTE--EEEEEE-CCC---CCC
T ss_pred ccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEE-EEeCCCcEEEEECCCCc--eeEEEe-ccccccccC
Confidence 21 11 22 1123457889999999 454 44556789999875421 122222 1 1 3
Q ss_pred CCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCC---
Q 018144 253 GAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTG--- 328 (360)
Q Consensus 253 g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g--- 328 (360)
.....++++++|++.++.... ...+.|..+|. +++.+..+..+.-
T Consensus 234 ~~i~~i~~~~~~~~l~~~~~d-------------------------------~~~g~i~i~d~~~~~~~~~~~~~~~~~~ 282 (397)
T 1sq9_A 234 NSIRSVKFSPQGSLLAIAHDS-------------------------------NSFGCITLYETEFGERIGSLSVPTHSSQ 282 (397)
T ss_dssp CCEEEEEECSSTTEEEEEEEE-------------------------------TTEEEEEEEETTTCCEEEEECBC-----
T ss_pred CccceEEECCCCCEEEEEecC-------------------------------CCCceEEEEECCCCcccceeccCccccc
Confidence 345678889999866654430 00156777774 6777777754100
Q ss_pred ------CcccceeeEEEE-CC-EEEEEeCCCCeEEEEeC
Q 018144 329 ------QLMSFVTSGLQV-DN-HLYVISLTSNFIGKVQL 359 (360)
Q Consensus 329 ------~~~~~~t~~~~~-~g-~Lylgs~~~~~i~~~~l 359 (360)
.....++.+... ++ .|+.++ ....|..+++
T Consensus 283 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~ 320 (397)
T 1sq9_A 283 ASLGEFAHSSWVMSLSFNDSGETLCSAG-WDGKLRFWDV 320 (397)
T ss_dssp ---CCBSBSSCEEEEEECSSSSEEEEEE-TTSEEEEEET
T ss_pred ccccccccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEc
Confidence 012346666665 34 444444 5666777665
No 179
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.92 E-value=0.014 Score=54.12 Aligned_cols=168 Identities=13% Similarity=0.042 Sum_probs=95.3
Q ss_pred CcceEEEcCCCCEEEEecCCeEEEEE--CCeee-----------------------------EEEe-cCCe-EEEEeCCC
Q 018144 80 HPEDASMDKNGVIYTATRDGWIKRLQ--DGTWV-----------------------------NWKF-IDSH-LIICDNAN 126 (360)
Q Consensus 80 ~Pe~i~~d~~G~l~v~~~~G~I~~~~--~g~~~-----------------------------~~~~-~~g~-L~v~~~~~ 126 (360)
.-.++++.++|.+.++..++.+..++ +|+.. .+.. ++|+ |..+..++
T Consensus 66 ~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~ 145 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDR 145 (393)
T ss_dssp CCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCC
Confidence 34678899999876665566666665 44221 1111 2344 44444444
Q ss_pred cEEEEc-CCC-eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC
Q 018144 127 GLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD 204 (360)
Q Consensus 127 gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~ 204 (360)
-+..++ .++ ......... ..+..+++.++|...++- ...+.|..+|..+++......
T Consensus 146 ~i~iwd~~~~~~~~~~~~h~----~~v~~~~~~p~~~~l~s~-----------------s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 146 LIRIWDIENRKIVMILQGHE----QDIYSLDYFPSGDKLVSG-----------------SGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp CEEEEETTTTEEEEEECCCS----SCEEEEEECTTSSEEEEE-----------------ETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEEECCCCcEEEEEccCC----CCEEEEEEcCCCCEEEEe-----------------cCCCcEEEEECCCCeeEEEEE
Confidence 455566 555 222111111 246788999999876652 235778889988887654433
Q ss_pred CCcCcceEEEec-CCCEEEEEeCCCCEEEEEEecCCcCcceeeec------cCCCCCCceeEEcCCCCEEEEEe
Q 018144 205 GFYFANGVALSR-DEDYVVVCESWKFRCRKYWLKGERKGKLETFA------ENLPGAPDNINLAPDGTFWIAII 271 (360)
Q Consensus 205 ~l~~pngia~~~-dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~------~~~~g~pd~i~~d~~G~lwva~~ 271 (360)
.......+++++ +++.+..+. ..+.|..++...... ...+. .........++++++|.+.++..
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~s-~d~~v~iwd~~~~~~--~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s 275 (393)
T 1erj_A 205 IEDGVTTVAVSPGDGKYIAAGS-LDRAVRVWDSETGFL--VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS 275 (393)
T ss_dssp CSSCEEEEEECSTTCCEEEEEE-TTSCEEEEETTTCCE--EEEEC------CCCSSCEEEEEECTTSSEEEEEE
T ss_pred cCCCcEEEEEECCCCCEEEEEc-CCCcEEEEECCCCcE--EEeecccccCCCCCCCCEEEEEECCCCCEEEEEe
Confidence 334567788998 787555544 456788888753221 11110 01112345677888887655443
No 180
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.91 E-value=0.0038 Score=56.26 Aligned_cols=167 Identities=8% Similarity=0.045 Sum_probs=93.0
Q ss_pred CcceEEEcCC----CCEEEEecCCeEEEEE--CCe--eeE----------EE-------ecCC-eEEEEeCCCcEEEEc-
Q 018144 80 HPEDASMDKN----GVIYTATRDGWIKRLQ--DGT--WVN----------WK-------FIDS-HLIICDNANGLHKVS- 132 (360)
Q Consensus 80 ~Pe~i~~d~~----G~l~v~~~~G~I~~~~--~g~--~~~----------~~-------~~~g-~L~v~~~~~gl~~~~- 132 (360)
.-.++++.++ ..|++++.+|.|..++ +++ ... +. ..++ .|+.+..++.+..++
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~ 146 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDP 146 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECT
T ss_pred cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeC
Confidence 4456777776 4567777889888887 332 111 11 0123 344455444566666
Q ss_pred CCC---eEEEeeccCCccccccccEE----EcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC
Q 018144 133 EDG---VENFLSYVNGSKLRFANDVV----EASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG 205 (360)
Q Consensus 133 ~~g---~~~l~~~~~~~~~~~~n~l~----~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~ 205 (360)
.++ ...+. ...+.....+..++ +.++|++.++ +...+.|..+|..+++.......
T Consensus 147 ~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~l~~-----------------~~~d~~i~i~d~~~~~~~~~~~~ 208 (357)
T 3i2n_A 147 RQKDDPVANME-PVQGENKRDCWTVAFGNAYNQEERVVCA-----------------GYDNGDIKLFDLRNMALRWETNI 208 (357)
T ss_dssp TSCSSCSEEEC-CCTTSCCCCEEEEEEECCCC-CCCEEEE-----------------EETTSEEEEEETTTTEEEEEEEC
T ss_pred CCCCCcceecc-ccCCCCCCceEEEEEEeccCCCCCEEEE-----------------EccCCeEEEEECccCceeeecCC
Confidence 333 33331 11221112344555 5577876664 23357899999988876544433
Q ss_pred CcCcceEEEec---CCCEEEEEeCCCCEEEEEEecCCcC-cceeeec-cCCCCCCceeEEcCCCC
Q 018144 206 FYFANGVALSR---DEDYVVVCESWKFRCRKYWLKGERK-GKLETFA-ENLPGAPDNINLAPDGT 265 (360)
Q Consensus 206 l~~pngia~~~---dg~~l~v~~t~~~~i~~~~~~g~~~-~~~~~~~-~~~~g~pd~i~~d~~G~ 265 (360)
......+++++ +++.++++. ..+.|..|++...+. ....... .........+.+.++|.
T Consensus 209 ~~~v~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 272 (357)
T 3i2n_A 209 KNGVCSLEFDRKDISMNKLVATS-LEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNR 272 (357)
T ss_dssp SSCEEEEEESCSSSSCCEEEEEE-STTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEE
T ss_pred CCceEEEEcCCCCCCCCEEEEEC-CCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCC
Confidence 45678899999 888666665 457888888754321 1111110 12223455677888887
No 181
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.90 E-value=0.0033 Score=57.81 Aligned_cols=181 Identities=14% Similarity=0.147 Sum_probs=96.3
Q ss_pred EEcCCCC-EEEEec-CC--eEEEEE--CCeeeE-------------EEecCCeEEEEeCCCcEEEEc-CCC-eEEEeecc
Q 018144 85 SMDKNGV-IYTATR-DG--WIKRLQ--DGTWVN-------------WKFIDSHLIICDNANGLHKVS-EDG-VENFLSYV 143 (360)
Q Consensus 85 ~~d~~G~-l~v~~~-~G--~I~~~~--~g~~~~-------------~~~~~g~L~v~~~~~gl~~~~-~~g-~~~l~~~~ 143 (360)
++.+||. |+++.. +| .|+.++ +|+... |...+..|+.+.....++.++ .++ .+.+....
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~ 121 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVP 121 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeech
Confidence 4556765 544443 45 478777 443322 222234577766666788888 666 44443221
Q ss_pred CCccccccccEEEcCCCcEEEEeCCC--CCC-Cccce--ecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEec-C
Q 018144 144 NGSKLRFANDVVEASDGSLYFTVSSS--KYL-PHEYC--LDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSR-D 217 (360)
Q Consensus 144 ~~~~~~~~n~l~~d~dG~l~vtd~~~--~~~-~~~~~--~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~-d 217 (360)
.+. ........+++|+..++-... .+. ...+. ...........|+.+|..+++.+.+.......+.++++| |
T Consensus 122 ~~~--~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~d 199 (388)
T 3pe7_A 122 AEW--VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYD 199 (388)
T ss_dssp TTE--EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTE
T ss_pred hhc--ccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCC
Confidence 110 001122347888766532100 000 00000 011223345789999999898877765555668899999 9
Q ss_pred CCEEEEEeCC-----CCEEEEEEecCCcCcceeeeccCCCC-CCceeEEcCCCC-E-EEEE
Q 018144 218 EDYVVVCESW-----KFRCRKYWLKGERKGKLETFAENLPG-APDNINLAPDGT-F-WIAI 270 (360)
Q Consensus 218 g~~l~v~~t~-----~~~i~~~~~~g~~~~~~~~~~~~~~g-~pd~i~~d~~G~-l-wva~ 270 (360)
|+.++++... ..+|+.++.++... ..+.....+ ......+++||+ | |++.
T Consensus 200 g~~l~~~~~~~~~~~~~~l~~~d~~~~~~---~~l~~~~~~~~~~~~~~spdg~~l~~~~~ 257 (388)
T 3pe7_A 200 DSTVAFCHEGPHDLVDARMWLINEDGTNM---RKVKTHAEGESCTHEFWVPDGSALVYVSY 257 (388)
T ss_dssp EEEEEEEECSCTTTSSCSEEEEETTSCCC---EESCCCCTTEEEEEEEECTTSSCEEEEEE
T ss_pred CCEEEEEEecCCCCCcceEEEEeCCCCce---EEeeeCCCCcccccceECCCCCEEEEEec
Confidence 9877665543 34799998765422 222211111 123457889996 5 4443
No 182
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.89 E-value=0.0045 Score=62.08 Aligned_cols=133 Identities=13% Similarity=0.177 Sum_probs=74.4
Q ss_pred eEEEEeCCC-----cEEEEc-CCC--eEEEeeccCCccccccccEEEcC--CCcEEEEeCCCCCCCccceecccccCCcc
Q 018144 118 HLIICDNAN-----GLHKVS-EDG--VENFLSYVNGSKLRFANDVVEAS--DGSLYFTVSSSKYLPHEYCLDILEGKPHG 187 (360)
Q Consensus 118 ~L~v~~~~~-----gl~~~~-~~g--~~~l~~~~~~~~~~~~n~l~~d~--dG~l~vtd~~~~~~~~~~~~~~~~~~~~g 187 (360)
.|+++.... .++.++ .+| .+.+............+.+++.+ ||.+.++-.. ....
T Consensus 271 ~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~---------------~g~~ 335 (706)
T 2z3z_A 271 ILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRR---------------DGWN 335 (706)
T ss_dssp EEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECT---------------TSSC
T ss_pred EEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEcc---------------CCcc
Confidence 366654332 466677 555 33332221111111246788998 9975443211 1234
Q ss_pred EEEEEcCCCCeEEEEeCCCcCcce-EEEecCCCEEEEEeCCCC----EEEEEEecCCcCcceeeeccCCCCCCceeEEcC
Q 018144 188 QLLKYDPSSNITTLVADGFYFANG-VALSRDEDYVVVCESWKF----RCRKYWLKGERKGKLETFAENLPGAPDNINLAP 262 (360)
Q Consensus 188 ~l~~~d~~tg~~~~~~~~l~~png-ia~~~dg~~l~v~~t~~~----~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~ 262 (360)
.|+.+|.+++..+.+..+...... +++++||+.+|++....+ .|++++.++.. .+.+. .......+.+++
T Consensus 336 ~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~---~~~l~--~~~~~~~~~~sp 410 (706)
T 2z3z_A 336 HLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK---TKDLT--PESGMHRTQLSP 410 (706)
T ss_dssp EEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC---CEESC--CSSSEEEEEECT
T ss_pred EEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC---ceecc--CCCceEEEEECC
Confidence 789998765655555433323334 789999998988877654 78888876532 22221 112244677788
Q ss_pred CCCEEEEE
Q 018144 263 DGTFWIAI 270 (360)
Q Consensus 263 ~G~lwva~ 270 (360)
+|+.++..
T Consensus 411 dg~~l~~~ 418 (706)
T 2z3z_A 411 DGSAIIDI 418 (706)
T ss_dssp TSSEEEEE
T ss_pred CCCEEEEE
Confidence 88755543
No 183
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.89 E-value=0.0019 Score=65.19 Aligned_cols=186 Identities=12% Similarity=0.024 Sum_probs=97.6
Q ss_pred cceEEEcCCCCEEEEecCCeEEEEE--CC---eeeE----------EE-ecCCe-EEEEeCCCcEEEEc-CCC-eEEEee
Q 018144 81 PEDASMDKNGVIYTATRDGWIKRLQ--DG---TWVN----------WK-FIDSH-LIICDNANGLHKVS-EDG-VENFLS 141 (360)
Q Consensus 81 Pe~i~~d~~G~l~v~~~~G~I~~~~--~g---~~~~----------~~-~~~g~-L~v~~~~~gl~~~~-~~g-~~~l~~ 141 (360)
..++++.+||...+...++.|+.++ ++ +... .. .++|+ |..+. .+.|+.++ .++ ...+..
T Consensus 111 v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp SCCCEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCC
T ss_pred cceeEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEecc
Confidence 4678899998754444348899998 44 3221 11 13454 44433 45688888 556 444322
Q ss_pred ccCCc------------cccccccEEEcCCCc-EEEEeCC-CCCCC-------------ccceecc-cccCCccEEEEEc
Q 018144 142 YVNGS------------KLRFANDVVEASDGS-LYFTVSS-SKYLP-------------HEYCLDI-LEGKPHGQLLKYD 193 (360)
Q Consensus 142 ~~~~~------------~~~~~n~l~~d~dG~-l~vtd~~-~~~~~-------------~~~~~~~-~~~~~~g~l~~~d 193 (360)
..... .+..+.++++++||+ |+++... ..... ....+.. -+......|+.+|
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 11110 011257899999995 6665321 00000 0000000 0001122788899
Q ss_pred CCC-CeEEEEeC---CCcCcceEEEecCCCEEEEEeC----CCCEEEEEEecCCcCcceeeeccCCCC---CCceeEEcC
Q 018144 194 PSS-NITTLVAD---GFYFANGVALSRDEDYVVVCES----WKFRCRKYWLKGERKGKLETFAENLPG---APDNINLAP 262 (360)
Q Consensus 194 ~~t-g~~~~~~~---~l~~pngia~~~dg~~l~v~~t----~~~~i~~~~~~g~~~~~~~~~~~~~~g---~pd~i~~d~ 262 (360)
.++ ++...+.. .......+++ +||+.|+++.. ....|+.++.++.+. ...+.....+ ....+++.+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~~~~~~~~~~sp 346 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ--RVLAHETSPTWVPLHNSLRFLD 346 (741)
T ss_dssp SSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE--EEEEEEECSSCCCCCSCCEECT
T ss_pred CCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce--EEEEEcCCCCcCCcCCceEECC
Confidence 888 77665532 2234578899 99998887653 234678888764322 1122111111 234688888
Q ss_pred CCCEEEEE
Q 018144 263 DGTFWIAI 270 (360)
Q Consensus 263 ~G~lwva~ 270 (360)
||++++..
T Consensus 347 dg~~~~~~ 354 (741)
T 2ecf_A 347 DGSILWSS 354 (741)
T ss_dssp TSCEEEEE
T ss_pred CCeEEEEe
Confidence 99854443
No 184
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.88 E-value=0.0013 Score=64.33 Aligned_cols=109 Identities=7% Similarity=-0.001 Sum_probs=65.9
Q ss_pred CCeEEEEeCCC-cEEEEc-CCC-eEEEeeccCCccccccccEEE-c-CCC-cEEEEeCCCC-CCCccceecccccCCccE
Q 018144 116 DSHLIICDNAN-GLHKVS-EDG-VENFLSYVNGSKLRFANDVVE-A-SDG-SLYFTVSSSK-YLPHEYCLDILEGKPHGQ 188 (360)
Q Consensus 116 ~g~L~v~~~~~-gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~-d-~dG-~l~vtd~~~~-~~~~~~~~~~~~~~~~g~ 188 (360)
+..|||++..+ .+.++| .+. ...+.+...+ ..|.++++ . ++| .+|+++...- ...+....+. .....+.
T Consensus 101 G~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g---~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~-~~~~~~~ 176 (595)
T 1fwx_A 101 GRFLFMNDKANTRVARVRCDVMKCDAILEIPNA---KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED-VANYVNV 176 (595)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEEECSSC---CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC-GGGEEEE
T ss_pred CCEEEEEcCCCCEEEEEECCCceEeeEEeCCCC---CCCcceeeeecCCCcEEEEecccccccCCCCccccc-ccccCce
Confidence 34599988764 588888 555 3322221112 34778887 4 666 6888753211 0000000111 1233467
Q ss_pred EEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCCC
Q 018144 189 LLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK 228 (360)
Q Consensus 189 l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~~ 228 (360)
+..+|.++.++.....--..|.++++++||+++|++....
T Consensus 177 vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~s 216 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNS 216 (595)
T ss_dssp EEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCT
T ss_pred EEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCc
Confidence 8999999887755433223799999999999999998665
No 185
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.87 E-value=0.014 Score=52.65 Aligned_cols=155 Identities=11% Similarity=-0.009 Sum_probs=89.0
Q ss_pred ccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCC--
Q 018144 150 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESW-- 227 (360)
Q Consensus 150 ~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~-- 227 (360)
.+..+++.++|+..++- ...|.|..+|..+++.............++++++++.++++...
T Consensus 76 ~v~~~~~~~~~~~l~s~-----------------~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 138 (369)
T 3zwl_B 76 TIWSIDVDCFTKYCVTG-----------------SADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVM 138 (369)
T ss_dssp CEEEEEECTTSSEEEEE-----------------ETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBT
T ss_pred cEEEEEEcCCCCEEEEE-----------------eCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCcc
Confidence 35677888888766642 23577888998777765544444567889999999977766543
Q ss_pred --CCEEEEEEecCCcC-cceeeec-------cCCCC--CCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCC
Q 018144 228 --KFRCRKYWLKGERK-GKLETFA-------ENLPG--APDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYP 295 (360)
Q Consensus 228 --~~~i~~~~~~g~~~-~~~~~~~-------~~~~g--~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~ 295 (360)
.+.|..++++.... ....... ....+ ....++++++|++.+....
T Consensus 139 ~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------------------- 195 (369)
T 3zwl_B 139 KNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHK----------------------- 195 (369)
T ss_dssp TBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEET-----------------------
T ss_pred CCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcC-----------------------
Confidence 16788888764321 1111100 01111 3456777888875554433
Q ss_pred ccccccccCCCceEEEEECCC--CcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCCeEEEEeC
Q 018144 296 KLFSQFITLGGGAHLIHVAED--GTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 296 ~~~~~~~~~~~~~~v~~~~~~--g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~~~l 359 (360)
.+.|..+|.. ++.+..+....+ .+..+... ++.+.+..-....|..+++
T Consensus 196 -----------dg~i~i~d~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 247 (369)
T 3zwl_B 196 -----------DGKISKYDVSNNYEYVDSIDLHEK----SISDMQFSPDLTYFITSSRDTNSFLVDV 247 (369)
T ss_dssp -----------TSEEEEEETTTTTEEEEEEECCSS----CEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred -----------CCEEEEEECCCCcEeEEEEecCCC----ceeEEEECCCCCEEEEecCCceEEEEEC
Confidence 2466666653 456666654332 35555554 3333333334455666554
No 186
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.86 E-value=0.0087 Score=58.95 Aligned_cols=42 Identities=19% Similarity=0.269 Sum_probs=29.1
Q ss_pred eEEEEECC-CCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCCC
Q 018144 308 AHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTS 351 (360)
Q Consensus 308 ~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~ 351 (360)
+.|..+|. +|+++..+..+.+.. ..+ .+...+|++|++...+
T Consensus 485 g~l~a~D~~tG~~lw~~~~~~~~~-~~p-~~~~~~G~~yv~~~~G 527 (571)
T 2ad6_A 485 GYLKALDNKDGKELWNFKMPSGGI-GSP-MTYSFKGKQYIGSMYG 527 (571)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCC-SCC-EEEEETTEEEEEEEEC
T ss_pred CeEEEEECCCCCEEEEEeCCCCcE-eee-EEEEECCEEEEEEECC
Confidence 68999995 799999988766531 112 2234689999987643
No 187
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.86 E-value=0.012 Score=53.26 Aligned_cols=173 Identities=16% Similarity=0.147 Sum_probs=93.3
Q ss_pred CCcceEEEcCCCCEE-EEecCCeEEEEE-C-Cee-------------eEEEe--c--CCeEEEEeCCCcEEEEc-CCC-e
Q 018144 79 NHPEDASMDKNGVIY-TATRDGWIKRLQ-D-GTW-------------VNWKF--I--DSHLIICDNANGLHKVS-EDG-V 136 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~-v~~~~G~I~~~~-~-g~~-------------~~~~~--~--~g~L~v~~~~~gl~~~~-~~g-~ 136 (360)
..-.++++.++|... +++.+|.|..++ . +.. ..+.. . +..|+.++.+.-+..++ .++ .
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 91 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW 91 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEE
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCce
Confidence 345577888887644 455788777776 2 221 11222 1 33455555444455566 455 3
Q ss_pred EEEeeccCCccccccccEEEcCC--CcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeE---EEEeCCCcCcce
Q 018144 137 ENFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT---TLVADGFYFANG 211 (360)
Q Consensus 137 ~~l~~~~~~~~~~~~n~l~~d~d--G~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~---~~~~~~l~~png 211 (360)
..+.... +. ...+..+++.++ |.+.++ +...+.|..+|..++.. ..+.........
T Consensus 92 ~~~~~~~-~~-~~~v~~~~~~~~~~~~~l~~-----------------~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~ 152 (379)
T 3jrp_A 92 SQIAVHA-VH-SASVNSVQWAPHEYGPLLLV-----------------ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNS 152 (379)
T ss_dssp EEEEEEC-CC-SSCEEEEEECCGGGCSEEEE-----------------EETTSEEEEEECCTTSCCCEEEEECCTTCEEE
T ss_pred eEeeeec-CC-CcceEEEEeCCCCCCCEEEE-----------------ecCCCcEEEEecCCCCceeeEEecCCCCceEE
Confidence 2322111 11 134678888888 776664 22356788888765521 222223345678
Q ss_pred EEEec-------------CCCEEEEEeCCCCEEEEEEecCCcCc-ceeeeccCCCCCCceeEEcCC---CCEEEEEe
Q 018144 212 VALSR-------------DEDYVVVCESWKFRCRKYWLKGERKG-KLETFAENLPGAPDNINLAPD---GTFWIAII 271 (360)
Q Consensus 212 ia~~~-------------dg~~l~v~~t~~~~i~~~~~~g~~~~-~~~~~~~~~~g~pd~i~~d~~---G~lwva~~ 271 (360)
+++++ |++.++.+.. .+.|..|++...... ..........+....+++.++ |++.++..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 153 ASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp EEECCCC----------CTTCEEEEEET-TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred EEEcCccccccccccCCCCCCEEEEEeC-CCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 88988 6775655554 567888887643211 111111122234556788888 65555443
No 188
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.84 E-value=0.017 Score=52.86 Aligned_cols=214 Identities=12% Similarity=0.102 Sum_probs=118.6
Q ss_pred CcceEEEcCCCCEEEE-ecCCeEEEEE-C-C-----------------eeeEEEe--cCCeEEEEeCCCcEEEEc-CCC-
Q 018144 80 HPEDASMDKNGVIYTA-TRDGWIKRLQ-D-G-----------------TWVNWKF--IDSHLIICDNANGLHKVS-EDG- 135 (360)
Q Consensus 80 ~Pe~i~~d~~G~l~v~-~~~G~I~~~~-~-g-----------------~~~~~~~--~~g~L~v~~~~~gl~~~~-~~g- 135 (360)
...++++.++|...+. ..++.+..++ . + .+..+.. .+..|..++.++-+..++ .++
T Consensus 108 ~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~ 187 (354)
T 2pbi_B 108 WVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ 187 (354)
T ss_dssp CCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC
T ss_pred CEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe
Confidence 3456788888876554 4788777665 2 1 0111111 233456666555565666 555
Q ss_pred -eEEEeeccCCccccccccEEEcC--CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-CcCcce
Q 018144 136 -VENFLSYVNGSKLRFANDVVEAS--DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANG 211 (360)
Q Consensus 136 -~~~l~~~~~~~~~~~~n~l~~d~--dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-l~~png 211 (360)
...+.. .. ..+..+.+.+ +|+..++ +...|.|..+|..+++....... ....+.
T Consensus 188 ~~~~~~~-h~----~~v~~~~~~~~~~g~~l~s-----------------gs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~ 245 (354)
T 2pbi_B 188 LLQSFHG-HG----ADVLCLDLAPSETGNTFVS-----------------GGCDKKAMVWDMRSGQCVQAFETHESDVNS 245 (354)
T ss_dssp EEEEEEC-CS----SCEEEEEECCCSSCCEEEE-----------------EETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEEEEcC-CC----CCeEEEEEEeCCCCCEEEE-----------------EeCCCeEEEEECCCCcEEEEecCCCCCeEE
Confidence 333321 11 1244555654 5666664 33467889999887776544333 345688
Q ss_pred EEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccC-CCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHH
Q 018144 212 VALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHV 290 (360)
Q Consensus 212 ia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~-~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~ 290 (360)
++++|+++.++.+. ..+.|..+++.... ....+... .......+.+.++|.+.++...
T Consensus 246 v~~~p~~~~l~s~s-~D~~v~lwd~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~------------------ 304 (354)
T 2pbi_B 246 VRYYPSGDAFASGS-DDATCRLYDLRADR--EVAIYSKESIIFGASSVDFSLSGRLLFAGYN------------------ 304 (354)
T ss_dssp EEECTTSSEEEEEE-TTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEET------------------
T ss_pred EEEeCCCCEEEEEe-CCCeEEEEECCCCc--EEEEEcCCCcccceeEEEEeCCCCEEEEEEC------------------
Confidence 99999998655554 45678888875321 12222211 1112346778899987665544
Q ss_pred HHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCCeEEE
Q 018144 291 LAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGK 356 (360)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~ 356 (360)
.+.|..+|. +|+.+..+.... ..++++... +|.+.+..-....|..
T Consensus 305 ----------------d~~i~vwd~~~~~~~~~l~~h~----~~v~~l~~spdg~~l~sgs~D~~v~v 352 (354)
T 2pbi_B 305 ----------------DYTINVWDVLKGSRVSILFGHE----NRVSTLRVSPDGTAFCSGSWDHTLRV 352 (354)
T ss_dssp ----------------TSCEEEEETTTCSEEEEECCCS----SCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred ----------------CCcEEEEECCCCceEEEEECCC----CcEEEEEECCCCCEEEEEcCCCCEEe
Confidence 245666674 677766665332 356777776 3443333333444443
No 189
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.83 E-value=0.013 Score=53.24 Aligned_cols=170 Identities=10% Similarity=0.077 Sum_probs=92.0
Q ss_pred cceEEEcCCCCEEE-EecCCeEEEEE--CCeee--------------EEEe-cCCe-EEEEeCCCcEEEEc-CCC-eEEE
Q 018144 81 PEDASMDKNGVIYT-ATRDGWIKRLQ--DGTWV--------------NWKF-IDSH-LIICDNANGLHKVS-EDG-VENF 139 (360)
Q Consensus 81 Pe~i~~d~~G~l~v-~~~~G~I~~~~--~g~~~--------------~~~~-~~g~-L~v~~~~~gl~~~~-~~g-~~~l 139 (360)
-.++++.++|.+.+ ++.+|.|..++ +++.. .+.. ++|+ |..+..+..+...+ .++ .+.+
T Consensus 19 v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~ 98 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECV 98 (345)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEE
Confidence 34788888887554 55788877776 44211 1111 2343 44455444454555 444 3322
Q ss_pred eeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeE-E---EEeCCCcCcceEEEe
Q 018144 140 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT-T---LVADGFYFANGVALS 215 (360)
Q Consensus 140 ~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~-~---~~~~~l~~pngia~~ 215 (360)
.. ..+. ...++.+++.++|++.++- ...+.|..+|..+++. . .+.......+.++++
T Consensus 99 ~~-~~~h-~~~v~~v~~sp~~~~l~s~-----------------s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (345)
T 3fm0_A 99 TT-LEGH-ENEVKSVAWAPSGNLLATC-----------------SRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159 (345)
T ss_dssp EE-ECCC-SSCEEEEEECTTSSEEEEE-----------------ETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEEC
T ss_pred EE-ccCC-CCCceEEEEeCCCCEEEEE-----------------ECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEEC
Confidence 21 1121 1357789999999877752 2345666676554421 1 122223346789999
Q ss_pred cCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEe
Q 018144 216 RDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 271 (360)
Q Consensus 216 ~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 271 (360)
|+++.+..+. ..+.|..++...........+. ...+....++++++|++.++..
T Consensus 160 p~~~~l~s~s-~d~~i~~w~~~~~~~~~~~~~~-~h~~~v~~l~~sp~g~~l~s~s 213 (345)
T 3fm0_A 160 PSQELLASAS-YDDTVKLYREEEDDWVCCATLE-GHESTVWSLAFDPSGQRLASCS 213 (345)
T ss_dssp SSSSCEEEEE-TTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCEEEEEe-CCCcEEEEEecCCCEEEEEEec-CCCCceEEEEECCCCCEEEEEe
Confidence 9998555554 4566777776432111111221 2223355678888887655443
No 190
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.82 E-value=8.9e-05 Score=72.97 Aligned_cols=75 Identities=16% Similarity=0.194 Sum_probs=53.9
Q ss_pred ccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC--CcCcceEEEecCCCEEEE
Q 018144 146 SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FYFANGVALSRDEDYVVV 223 (360)
Q Consensus 146 ~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~--l~~pngia~~~dg~~l~v 223 (360)
..+..|++|++|++|+|||+..+..-.... +....++.++.+++.+|++..+..+ -+...|++++||++.||+
T Consensus 473 ~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~-----~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 473 NMFNSPDGLGFDKAGRLWILTDGDSSNAGD-----FAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp TCCCCEEEEEECTTCCEEEEECCCCCCSGG-----GTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CCccCCcceEECCCCCEEEEecCCCccccc-----ccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEE
Confidence 346789999999999999986542211111 1122356789999999999887643 345679999999998887
Q ss_pred Ee
Q 018144 224 CE 225 (360)
Q Consensus 224 ~~ 225 (360)
.-
T Consensus 548 ni 549 (592)
T 3zwu_A 548 GI 549 (592)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 191
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.81 E-value=0.02 Score=52.76 Aligned_cols=139 Identities=9% Similarity=-0.021 Sum_probs=77.3
Q ss_pred CCccEEEEEcCC-CCeE-EEEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccC------CCCCC
Q 018144 184 KPHGQLLKYDPS-SNIT-TLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN------LPGAP 255 (360)
Q Consensus 184 ~~~g~l~~~d~~-tg~~-~~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~------~~g~p 255 (360)
...+.|..+|.. +++. ..+.......+.++++||++.+ ++.+..+.|..+++.... ....+... .....
T Consensus 225 s~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l-~s~s~D~~i~lwd~~~~~--~~~~~~~~~~~~~~~~~~v 301 (380)
T 3iz6_a 225 SCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRF-GTGSDDGTCRLFDMRTGH--QLQVYNREPDRNDNELPIV 301 (380)
T ss_dssp ETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEE-EEECSSSCEEEEETTTTE--EEEEECCCCSSSCCSSCSC
T ss_pred ECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeE-EEEcCCCeEEEEECCCCc--EEEEecccccccccccCce
Confidence 345667777764 2222 2222223456899999999854 555556778888875321 11222110 11124
Q ss_pred ceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccce
Q 018144 256 DNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFV 334 (360)
Q Consensus 256 d~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~ 334 (360)
..+++.++|.+.++... .+.|..+|. .++....+..........+
T Consensus 302 ~~~~~s~~g~~l~~g~~----------------------------------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 347 (380)
T 3iz6_a 302 TSVAFSISGRLLFAGYS----------------------------------NGDCYVWDTLLAEMVLNLGTLQNSHEGRI 347 (380)
T ss_dssp SEEEECSSSSEEEEECT----------------------------------TSCEEEEETTTCCEEEEECCSCSSCCCCC
T ss_pred EEEEECCCCCEEEEEEC----------------------------------CCCEEEEECCCCceEEEEecccCCCCCce
Confidence 57889999987766544 256777774 5666666532211123456
Q ss_pred eeEEEE-CCEEEEEeCCCCeEEEEeC
Q 018144 335 TSGLQV-DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 335 t~~~~~-~g~Lylgs~~~~~i~~~~l 359 (360)
+++... +|.+.+..-....|..+++
T Consensus 348 ~~l~~s~dg~~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 348 SCLGLSSDGSALCTGSWDKNLKIWAF 373 (380)
T ss_dssp CEEEECSSSSEEEEECTTSCEEEEEC
T ss_pred EEEEECCCCCEEEEeeCCCCEEEEec
Confidence 777765 4544444444556666554
No 192
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.81 E-value=0.007 Score=60.93 Aligned_cols=40 Identities=23% Similarity=0.253 Sum_probs=27.9
Q ss_pred eEEEEECC-CCcEEEEEeCCCCCcccceeeEEEECCEEEEEeC
Q 018144 308 AHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISL 349 (360)
Q Consensus 308 ~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~ 349 (360)
+.+..+|. +|+++..+..+.+.... + ...+.+|+.|++..
T Consensus 498 g~l~a~D~~tG~~lw~~~~~~~~~~~-p-~~y~~~G~~~v~~~ 538 (677)
T 1kb0_A 498 GRLVAYHAATGEKLWEAPTGTGVVAA-P-STYMVDGRQYVSVA 538 (677)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSC-C-EEEEETTEEEEEEE
T ss_pred CcEEEEECCCCceeeeeeCCCCcccC-C-EEEEeCCEEEEEEe
Confidence 68999995 79999999887764222 2 12346888888753
No 193
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.79 E-value=0.0096 Score=53.98 Aligned_cols=170 Identities=8% Similarity=-0.052 Sum_probs=95.8
Q ss_pred CCcceEEEcCCCCE-EEEecCCeEEEEE--CCeeeE-------------EEe-cCC-eEEEEeCCCcEEEEc-CCC--eE
Q 018144 79 NHPEDASMDKNGVI-YTATRDGWIKRLQ--DGTWVN-------------WKF-IDS-HLIICDNANGLHKVS-EDG--VE 137 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l-~v~~~~G~I~~~~--~g~~~~-------------~~~-~~g-~L~v~~~~~gl~~~~-~~g--~~ 137 (360)
....++++.++|.+ ++++.+|.|..++ +++... +.. +++ .|+++..++.+..++ ..+ ..
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~ 132 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW 132 (372)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEE
T ss_pred CcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcce
Confidence 45567888887765 4555888888887 554221 111 233 455555545455555 332 22
Q ss_pred EEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcC------------------CCCeE
Q 018144 138 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP------------------SSNIT 199 (360)
Q Consensus 138 ~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~------------------~tg~~ 199 (360)
.......+ ....+..+++.++|...++- ...|.|..+|. .+++.
T Consensus 133 ~~~~~~~~-~~~~i~~~~~~~~~~~l~~~-----------------~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (372)
T 1k8k_C 133 VCKHIKKP-IRSTVLSLDWHPNSVLLAAG-----------------SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGEL 194 (372)
T ss_dssp EEEEECTT-CCSCEEEEEECTTSSEEEEE-----------------ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCE
T ss_pred eeeeeecc-cCCCeeEEEEcCCCCEEEEE-----------------cCCCCEEEEEcccccccccccccccccccchhhh
Confidence 22111111 11357788999999866652 23456777773 23443
Q ss_pred EEEe-CCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEE
Q 018144 200 TLVA-DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAI 270 (360)
Q Consensus 200 ~~~~-~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~ 270 (360)
.... ......+.++++++++.++.+. ..+.|..|++...+ ....+. ........++++++|.+.++.
T Consensus 195 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 195 MFESSSSCGWVHGVCFSANGSRVAWVS-HDSTVCLADADKKM--AVATLA-SETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp EEECCCCSSCEEEEEECSSSSEEEEEE-TTTEEEEEEGGGTT--EEEEEE-CSSCCEEEEEEEETTEEEEEE
T ss_pred eEecCCCCCeEEEEEECCCCCEEEEEe-CCCEEEEEECCCCc--eeEEEc-cCCCCeEEEEEecCCCEEEEE
Confidence 3322 2234567899999998666665 45789999985322 222222 222234667788888766554
No 194
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.79 E-value=0.0034 Score=58.30 Aligned_cols=171 Identities=15% Similarity=0.099 Sum_probs=102.2
Q ss_pred CCcceEEEcCCC-C-EEEEecCCeEEEEE--CCeee-EE------------Ee-cCC-eEEEEeCCCcEEEEc-CCC--e
Q 018144 79 NHPEDASMDKNG-V-IYTATRDGWIKRLQ--DGTWV-NW------------KF-IDS-HLIICDNANGLHKVS-EDG--V 136 (360)
Q Consensus 79 ~~Pe~i~~d~~G-~-l~v~~~~G~I~~~~--~g~~~-~~------------~~-~~g-~L~v~~~~~gl~~~~-~~g--~ 136 (360)
....++++.++| + |+.++.+|.|..++ +++.. .+ .. +++ .|+.+..++.+..++ .++ .
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVV 211 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEE
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCcee
Confidence 345678888886 3 55666889898888 44322 12 11 133 355555555566677 566 3
Q ss_pred EEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeE--EEE-eCCCcCcceEE
Q 018144 137 ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT--TLV-ADGFYFANGVA 213 (360)
Q Consensus 137 ~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~--~~~-~~~l~~pngia 213 (360)
..+.....+ ..+..+++.++|.+.++-.+ ....+.|..+|..+++. ... .........++
T Consensus 212 ~~~~~~~~~---~~~~~~~~~~~~~~l~~g~~--------------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 274 (402)
T 2aq5_A 212 AEKDRPHEG---TRPVHAVFVSEGKILTTGFS--------------RMSERQVALWDTKHLEEPLSLQELDTSSGVLLPF 274 (402)
T ss_dssp EEEECSSCS---SSCCEEEECSTTEEEEEEEC--------------TTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEE
T ss_pred eeeccCCCC---CcceEEEEcCCCcEEEEecc--------------CCCCceEEEEcCccccCCceEEeccCCCceeEEE
Confidence 333112111 23677889999987775210 02357888899876542 112 22334567899
Q ss_pred EecCCCEEEEEeCCCCEEEEEEecCCc--CcceeeeccCCCCCCceeEEcCCCCEEE
Q 018144 214 LSRDEDYVVVCESWKFRCRKYWLKGER--KGKLETFAENLPGAPDNINLAPDGTFWI 268 (360)
Q Consensus 214 ~~~dg~~l~v~~t~~~~i~~~~~~g~~--~~~~~~~~~~~~g~pd~i~~d~~G~lwv 268 (360)
+++|++.++++....+.|..|+++..+ ......+. ..+...++++.++|.+.+
T Consensus 275 ~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~--~~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS--SKESQRGMGYMPKRGLEV 329 (402)
T ss_dssp EETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC--CSSCCSEEEECCGGGSCG
T ss_pred EcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc--cCCcccceEEecccccce
Confidence 999999888888767789999987543 22222221 223466788888776543
No 195
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.78 E-value=0.027 Score=54.84 Aligned_cols=218 Identities=11% Similarity=0.102 Sum_probs=122.7
Q ss_pred cceEEEcC--CCCEE-EEecCCeEEEEE--CC------eeeE---EE----------e-cCCe-EEEEeCCC---cEEEE
Q 018144 81 PEDASMDK--NGVIY-TATRDGWIKRLQ--DG------TWVN---WK----------F-IDSH-LIICDNAN---GLHKV 131 (360)
Q Consensus 81 Pe~i~~d~--~G~l~-v~~~~G~I~~~~--~g------~~~~---~~----------~-~~g~-L~v~~~~~---gl~~~ 131 (360)
..++++.+ +|.+. +++.+|.|..++ ++ +... +. . ++++ |.++.... +.+.+
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~ 146 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFIS 146 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEE
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEE
Confidence 57889998 88654 555888887777 33 1111 11 1 2333 44444331 22222
Q ss_pred cCCC--eEEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCC-c
Q 018144 132 SEDG--VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-Y 207 (360)
Q Consensus 132 ~~~g--~~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l-~ 207 (360)
-..+ ...+. +. ...+..+++.++|. +.++ +...+.|..+|..+++........ .
T Consensus 147 ~d~~~~~~~~~----~~-~~~v~~~~~~~~~~~~l~~-----------------~~~d~~v~vwd~~~~~~~~~~~~~~~ 204 (615)
T 1pgu_A 147 WDSGNSLGEVS----GH-SQRINACHLKQSRPMRSMT-----------------VGDDGSVVFYQGPPFKFSASDRTHHK 204 (615)
T ss_dssp TTTCCEEEECC----SC-SSCEEEEEECSSSSCEEEE-----------------EETTTEEEEEETTTBEEEEEECSSSC
T ss_pred EECCCcceeee----cC-CccEEEEEECCCCCcEEEE-----------------EeCCCcEEEEeCCCcceeeeecccCC
Confidence 2233 22221 11 13467889999986 5554 233578888998777665544332 2
Q ss_pred ---CcceEEEecC-CCEEEEEeCCCCEEEEEEecCCcCcceeeecc---CCCCCCceeEEcCCCCEEEEEecCchhHHHH
Q 018144 208 ---FANGVALSRD-EDYVVVCESWKFRCRKYWLKGERKGKLETFAE---NLPGAPDNINLAPDGTFWIAIIKLDARRMKI 280 (360)
Q Consensus 208 ---~pngia~~~d-g~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~---~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~ 280 (360)
....++++++ ++.++.+.. .+.|..+++...+ ....+.. ...+....+.+. +|.+.++...
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~~~-dg~i~vwd~~~~~--~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~-------- 272 (615)
T 1pgu_A 205 QGSFVRDVEFSPDSGEFVITVGS-DRKISCFDGKSGE--FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGA-------- 272 (615)
T ss_dssp TTCCEEEEEECSTTCCEEEEEET-TCCEEEEETTTCC--EEEECCBTTBCCCSCEEEEEES-SSSEEEEEET--------
T ss_pred CCceEEEEEECCCCCCEEEEEeC-CCeEEEEECCCCC--EeEEecccccccCCceEEEEEc-CCCEEEEEcC--------
Confidence 4678999999 886665554 5678888875322 1222211 222345567888 8876665544
Q ss_pred hhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEE-ECCEEEEEeCCCCeEEEEe
Q 018144 281 LNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQ-VDNHLYVISLTSNFIGKVQ 358 (360)
Q Consensus 281 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~-~~g~Lylgs~~~~~i~~~~ 358 (360)
.+.|..++. +++.+..+..........+..+.. .++.|..++. ...|..++
T Consensus 273 --------------------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~g~i~~~d 325 (615)
T 1pgu_A 273 --------------------------DATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSL-DGTLNFYE 325 (615)
T ss_dssp --------------------------TSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEET-TSCEEEEE
T ss_pred --------------------------CCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEEC-CCCEEEEE
Confidence 256777775 577777777653322334444444 4466666654 44555554
Q ss_pred C
Q 018144 359 L 359 (360)
Q Consensus 359 l 359 (360)
+
T Consensus 326 ~ 326 (615)
T 1pgu_A 326 L 326 (615)
T ss_dssp T
T ss_pred C
Confidence 3
No 196
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.77 E-value=0.0015 Score=61.66 Aligned_cols=170 Identities=11% Similarity=0.058 Sum_probs=94.2
Q ss_pred cceEEEcC-CC-CEEEEecCCeEEEEE--CCe-------------eeEEEe--cCCe-EEEEeCCCcEEEEc-CCC-eEE
Q 018144 81 PEDASMDK-NG-VIYTATRDGWIKRLQ--DGT-------------WVNWKF--IDSH-LIICDNANGLHKVS-EDG-VEN 138 (360)
Q Consensus 81 Pe~i~~d~-~G-~l~v~~~~G~I~~~~--~g~-------------~~~~~~--~~g~-L~v~~~~~gl~~~~-~~g-~~~ 138 (360)
-.+|++.+ ++ .|.+|+.+|.|..++ .++ +..+.+ .++. |+.+..++-+..+| +++ .+.
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~ 201 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRV 201 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeE
Confidence 45788886 44 466778899988887 332 112222 2344 44444344455556 555 544
Q ss_pred EeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCC
Q 018144 139 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDE 218 (360)
Q Consensus 139 l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg 218 (360)
+...... ......++++++|.+.++ +...|.|..+|.++..+..+.......+.++++|++
T Consensus 202 ~~~~~~~--~~~~~~~~~~~~~~~l~~-----------------g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~ 262 (435)
T 4e54_B 202 FASSDTI--NIWFCSLDVSASSRMVVT-----------------GDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCC 262 (435)
T ss_dssp EECCSSC--SCCCCCEEEETTTTEEEE-----------------ECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTC
T ss_pred EeccCCC--CccEEEEEECCCCCEEEE-----------------EeCCCcEeeeccCcceeEEEecccceEEeeeecCCC
Confidence 4322111 124567889999987775 334577888887654433332223356789999998
Q ss_pred CEEEEEeCCCCEEEEEEecCCcC-cceeeeccCCCCCCceeEEcCCCCEEEEE
Q 018144 219 DYVVVCESWKFRCRKYWLKGERK-GKLETFAENLPGAPDNINLAPDGTFWIAI 270 (360)
Q Consensus 219 ~~l~v~~t~~~~i~~~~~~g~~~-~~~~~~~~~~~g~pd~i~~d~~G~lwva~ 270 (360)
+.++++....+.|..+++...+. ...... .........++++++|++.++.
T Consensus 263 ~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~spdg~~l~s~ 314 (435)
T 4e54_B 263 DWFLATASVDQTVKIWDLRQVRGKASFLYS-LPHRHPVNAACFSPDGARLLTT 314 (435)
T ss_dssp SSEEEEEETTSBCCEEETTTCCSSSCCSBC-CBCSSCEEECCBCTTSSEEEEE
T ss_pred ceEEEEecCcceeeEEecccccccceEEEe-eeccccccceeECCCCCeeEEE
Confidence 76666655566787888753221 111110 0111223456667777655443
No 197
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.77 E-value=0.011 Score=55.90 Aligned_cols=169 Identities=11% Similarity=0.112 Sum_probs=103.4
Q ss_pred CCcceEEEcCCCC-EEEEecCCeEEEEE--CCee---------------eEEE-ecC---Ce-EEEEeCCCcEEEEc-CC
Q 018144 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW---------------VNWK-FID---SH-LIICDNANGLHKVS-ED 134 (360)
Q Consensus 79 ~~Pe~i~~d~~G~-l~v~~~~G~I~~~~--~g~~---------------~~~~-~~~---g~-L~v~~~~~gl~~~~-~~ 134 (360)
..+.++++.++|. |++++.+|.|+.++ +++. ..+. .++ ++ |+.++.+..+..++ .+
T Consensus 150 ~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~ 229 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ 229 (450)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC
T ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC
Confidence 4567899998875 56667889999887 3321 1111 123 54 44555555566666 55
Q ss_pred C--eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-------
Q 018144 135 G--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG------- 205 (360)
Q Consensus 135 g--~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~------- 205 (360)
+ ...+..... ..+..+++. +|.+.++- ...+.|..+|..+++.......
T Consensus 230 ~~~~~~~~~~h~----~~v~~~~~s-d~~~l~s~-----------------~~d~~v~vwd~~~~~~~~~~~~~~~~~~~ 287 (450)
T 2vdu_B 230 CFIVDKWLFGHK----HFVSSICCG-KDYLLLSA-----------------GGDDKIFAWDWKTGKNLSTFDYNSLIKPY 287 (450)
T ss_dssp TTCEEEECCCCS----SCEEEEEEC-STTEEEEE-----------------ESSSEEEEEETTTCCEEEEEECHHHHGGG
T ss_pred CceeeeeecCCC----CceEEEEEC-CCCEEEEE-----------------eCCCeEEEEECCCCcEeeeecchhhhhhh
Confidence 5 333221111 356788898 88877752 2357888899887765432210
Q ss_pred -------------------CcCcceEEEecCCCEEEEEeCCCCEEEEEEe--cC-CcCcceeeeccCCCCCCceeEEcCC
Q 018144 206 -------------------FYFANGVALSRDEDYVVVCESWKFRCRKYWL--KG-ERKGKLETFAENLPGAPDNINLAPD 263 (360)
Q Consensus 206 -------------------l~~pngia~~~dg~~l~v~~t~~~~i~~~~~--~g-~~~~~~~~~~~~~~g~pd~i~~d~~ 263 (360)
-....+++++++++.++++....+.|..|++ .. ........+. ..+.+..+++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~--~~~~v~~~~~~~- 364 (450)
T 2vdu_B 288 LNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIIT--FPYNVISLSAHN- 364 (450)
T ss_dssp CCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEE--CSSCEEEEEEET-
T ss_pred hhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEec--cCCceEEEEecC-
Confidence 1234578999999988888756788999988 22 1112222222 224577888888
Q ss_pred CCEEEEEec
Q 018144 264 GTFWIAIIK 272 (360)
Q Consensus 264 G~lwva~~~ 272 (360)
+.+|++...
T Consensus 365 ~~~~v~~~~ 373 (450)
T 2vdu_B 365 DEFQVTLDN 373 (450)
T ss_dssp TEEEEEECC
T ss_pred CcEEEEEec
Confidence 468887655
No 198
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.76 E-value=0.012 Score=57.33 Aligned_cols=228 Identities=14% Similarity=0.046 Sum_probs=117.5
Q ss_pred CCcceEEEcCCCCEEEEecCCeEEEEE--CC----e------------eeEEEe-c--CCe-EEEEeCCCcEEEEc-CCC
Q 018144 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DG----T------------WVNWKF-I--DSH-LIICDNANGLHKVS-EDG 135 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v~~~~G~I~~~~--~g----~------------~~~~~~-~--~g~-L~v~~~~~gl~~~~-~~g 135 (360)
..+.+++++++|.+.+...++.|..++ ++ + +..+.. + +++ |..++.++.+..++ .++
T Consensus 19 ~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~ 98 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFD 98 (615)
T ss_dssp TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEE
T ss_pred CceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCC
Confidence 456778888888765544577777777 44 2 222222 2 333 34444333344444 211
Q ss_pred ------eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCc
Q 018144 136 ------VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA 209 (360)
Q Consensus 136 ------~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~p 209 (360)
........... ...+..+++.++|+..++-... ....+.|+.+|.. .....+.......
T Consensus 99 ~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~~-------------~~~~~~v~~~d~~-~~~~~~~~~~~~v 163 (615)
T 1pgu_A 99 KESNSVEVNVKSEFQVL-AGPISDISWDFEGRRLCVVGEG-------------RDNFGVFISWDSG-NSLGEVSGHSQRI 163 (615)
T ss_dssp GGGTEEEEEEEEEEECC-SSCEEEEEECTTSSEEEEEECC-------------SSCSEEEEETTTC-CEEEECCSCSSCE
T ss_pred cccccccccccchhhcc-cccEEEEEEeCCCCEEEEeccC-------------CCCccEEEEEECC-CcceeeecCCccE
Confidence 00111111111 1347788999999765542210 0113678888732 3333333334457
Q ss_pred ceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCC---CCceeEEcCC-CCEEEEEecCchhHHHHhhcch
Q 018144 210 NGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPG---APDNINLAPD-GTFWIAIIKLDARRMKILNSSK 285 (360)
Q Consensus 210 ngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g---~pd~i~~d~~-G~lwva~~~~~~~~~~~~~~~~ 285 (360)
+.++++++++.++++....+.|..++....+ ....+. .... ....+++.++ |++.++...
T Consensus 164 ~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~--~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~------------- 227 (615)
T 1pgu_A 164 NACHLKQSRPMRSMTVGDDGSVVFYQGPPFK--FSASDR-THHKQGSFVRDVEFSPDSGEFVITVGS------------- 227 (615)
T ss_dssp EEEEECSSSSCEEEEEETTTEEEEEETTTBE--EEEEEC-SSSCTTCCEEEEEECSTTCCEEEEEET-------------
T ss_pred EEEEECCCCCcEEEEEeCCCcEEEEeCCCcc--eeeeec-ccCCCCceEEEEEECCCCCCEEEEEeC-------------
Confidence 8899999997455555556788888864321 112222 1222 3456888988 876554433
Q ss_pred hHHHHHHhCCccccccccCCCceEEEEEC-CCCcEEEEEeCCCCCcccceeeEEEEC-CEEEEEeCCCCeEEEEeC
Q 018144 286 LIKHVLAAYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQVD-NHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 286 ~~r~~~~~~~~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~~-g~Lylgs~~~~~i~~~~l 359 (360)
.+.|..+| .+++.+..+..+.......+..+...+ ..|+.++ ....|..+++
T Consensus 228 ---------------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~-~d~~i~~wd~ 281 (615)
T 1pgu_A 228 ---------------------DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVG-ADATIRVWDV 281 (615)
T ss_dssp ---------------------TCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEE-TTSEEEEEET
T ss_pred ---------------------CCeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEc-CCCcEEEEEC
Confidence 24566677 457777666220000012355555534 3444444 3455666554
No 199
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.75 E-value=0.0015 Score=59.86 Aligned_cols=138 Identities=7% Similarity=-0.011 Sum_probs=72.8
Q ss_pred CcceEEEcCCCCEEEEe-cCCeEEEEE--CCeee-------------EEEe-cCC-eEEEEeCCCcEEEEc-CCCe--EE
Q 018144 80 HPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWV-------------NWKF-IDS-HLIICDNANGLHKVS-EDGV--EN 138 (360)
Q Consensus 80 ~Pe~i~~d~~G~l~v~~-~~G~I~~~~--~g~~~-------------~~~~-~~g-~L~v~~~~~gl~~~~-~~g~--~~ 138 (360)
.-.++++.++|.+.+.. .+|.|..++ ++..+ .+.. +++ .|..+..++.+..++ .++. ..
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~ 92 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQ 92 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCC
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceee
Confidence 34567888888755444 778777666 44211 1111 233 344455444455555 3221 11
Q ss_pred EeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCe----EEEEeC-CCcCcceEE
Q 018144 139 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI----TTLVAD-GFYFANGVA 213 (360)
Q Consensus 139 l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~----~~~~~~-~l~~pngia 213 (360)
... ..+. ...+..+++.++|+..++ +...+.|..+|..+++ ...+.. .....+.++
T Consensus 93 ~~~-~~~~-~~~v~~~~~~~~~~~l~~-----------------~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~ 153 (377)
T 3dwl_C 93 TLV-LLRL-NRAATFVRWSPNEDKFAV-----------------GSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLD 153 (377)
T ss_dssp EEE-CCCC-SSCEEEEECCTTSSCCEE-----------------EESSSCEEECCC-----CCCCEEECSSCCSCEEEEE
T ss_pred eeE-eccc-CCceEEEEECCCCCEEEE-----------------EecCCeEEEEEECCcccceeeeEeecccCCCeEEEE
Confidence 111 1111 134678888888875554 2234667778876654 333333 344567899
Q ss_pred EecCCCEEEEEeCCCCEEEEEEec
Q 018144 214 LSRDEDYVVVCESWKFRCRKYWLK 237 (360)
Q Consensus 214 ~~~dg~~l~v~~t~~~~i~~~~~~ 237 (360)
++++++.++.+.. .+.|..++++
T Consensus 154 ~~~~~~~l~~~~~-d~~i~iwd~~ 176 (377)
T 3dwl_C 154 WHPNNVLLAAGCA-DRKAYVLSAY 176 (377)
T ss_dssp ECTTSSEEEEEES-SSCEEEEEEC
T ss_pred EcCCCCEEEEEeC-CCEEEEEEEE
Confidence 9999986665554 4678888874
No 200
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.71 E-value=0.0053 Score=61.88 Aligned_cols=123 Identities=11% Similarity=0.196 Sum_probs=67.8
Q ss_pred cEEEEc-CCC-eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC
Q 018144 127 GLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD 204 (360)
Q Consensus 127 gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~ 204 (360)
.++.++ .+| .+.+.......-....+.+++.+||+++++... .....|+.+|.+++ ...+..
T Consensus 313 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~---------------~g~~~l~~~~~~~~-~~~l~~ 376 (741)
T 2ecf_A 313 DLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSER---------------TGFQHLYRIDSKGK-AAALTH 376 (741)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECT---------------TSSCEEEEECSSSC-EEESCC
T ss_pred EEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecC---------------CCccEEEEEcCCCC-eeeeee
Confidence 466677 566 444332211111113457899999986665322 11247999987644 444433
Q ss_pred CCcCcceE-EEecCCCEEEEEeCCC----CEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEE
Q 018144 205 GFYFANGV-ALSRDEDYVVVCESWK----FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAI 270 (360)
Q Consensus 205 ~l~~pngi-a~~~dg~~l~v~~t~~----~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~ 270 (360)
+......+ ++++||+.++++.... .+|++++.++.. .+.+.. .. ....+.++++|+..+..
T Consensus 377 ~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~---~~~l~~-~~-~~~~~~~spdg~~l~~~ 442 (741)
T 2ecf_A 377 GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQ---PQRLSK-AP-GMHSASFARNASVYVDS 442 (741)
T ss_dssp SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCC---CEECCC-SC-SEEEEEECTTSSEEEEE
T ss_pred cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCC---eeeccc-CC-CceEEEECCCCCEEEEE
Confidence 33333455 5999999887776543 356666654432 222221 11 23457788999765544
No 201
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.71 E-value=0.0011 Score=66.09 Aligned_cols=145 Identities=14% Similarity=0.032 Sum_probs=81.5
Q ss_pred EEEEeC-CCcEEEEc-C--C-C-eEEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEE
Q 018144 119 LIICDN-ANGLHKVS-E--D-G-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLK 191 (360)
Q Consensus 119 L~v~~~-~~gl~~~~-~--~-g-~~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~ 191 (360)
|..+.. ...|+.++ . . + .+.+.............++++++||+ |+++..... . .........|+.
T Consensus 94 la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~-~-------~~~~~~~~~i~~ 165 (662)
T 3azo_A 94 LVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFT-G-------EGPSDVRRFLAA 165 (662)
T ss_dssp EEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEEC-S-------SSTTCEEEEEEE
T ss_pred EEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEeccc-C-------CCCCCceeEEEE
Confidence 444433 24677777 4 2 6 54443211000112456788999996 555421100 0 000012257999
Q ss_pred EcCCC------CeEEEEe-CCCcCcceEEEecCCCEEEEEeCCC-------CEEEEEEecC-CcCcceeeeccCCCCCCc
Q 018144 192 YDPSS------NITTLVA-DGFYFANGVALSRDEDYVVVCESWK-------FRCRKYWLKG-ERKGKLETFAENLPGAPD 256 (360)
Q Consensus 192 ~d~~t------g~~~~~~-~~l~~pngia~~~dg~~l~v~~t~~-------~~i~~~~~~g-~~~~~~~~~~~~~~g~pd 256 (360)
+|.++ ++.+.+. .+......++++|||+.|+++.... ..|+.+++++ ........+.....+.+.
T Consensus 166 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~ 245 (662)
T 3azo_A 166 VPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIA 245 (662)
T ss_dssp EETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEE
T ss_pred EECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEc
Confidence 99987 6776665 5455667889999999887766432 4799999873 322233333222223455
Q ss_pred eeEEcCCCCEEEEEe
Q 018144 257 NINLAPDGTFWIAII 271 (360)
Q Consensus 257 ~i~~d~~G~lwva~~ 271 (360)
.+.+.+||.+++...
T Consensus 246 ~~~~spdg~l~~~~~ 260 (662)
T 3azo_A 246 QAEWAPDGSLIVATD 260 (662)
T ss_dssp EEEECTTSCEEEEEC
T ss_pred ceEECCCCeEEEEEC
Confidence 678889998766554
No 202
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.70 E-value=0.0057 Score=60.81 Aligned_cols=108 Identities=8% Similarity=-0.022 Sum_probs=60.0
Q ss_pred ccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCC-CC---eEEEEeCC-CcCcceEEEecCCCEEEE
Q 018144 150 FANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SN---ITTLVADG-FYFANGVALSRDEDYVVV 223 (360)
Q Consensus 150 ~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-tg---~~~~~~~~-l~~pngia~~~dg~~l~v 223 (360)
....+++++||+ |+++..... ...| ....|+.+|.+ +| +.+.+..+ ......+++++||+ +|+
T Consensus 189 ~~~~~~~SpDG~~la~~~~~~~--~~~~--------~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~ 257 (662)
T 3azo_A 189 FVTGPRLSPDGRQAVWLAWDHP--RMPW--------EGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIV 257 (662)
T ss_dssp EECCCEECTTSSEEEEEEECTT--CCTT--------TCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEE
T ss_pred cccCceECCCCCEEEEEECCCC--CCCC--------CCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEE
Confidence 456778999996 555432100 0000 12468888887 56 55555443 34567899999999 555
Q ss_pred EeCCCC--EEEEEEecCCcCcceeeeccCCCC------C--CceeEEcCCCCEEEEEe
Q 018144 224 CESWKF--RCRKYWLKGERKGKLETFAENLPG------A--PDNINLAPDGTFWIAII 271 (360)
Q Consensus 224 ~~t~~~--~i~~~~~~g~~~~~~~~~~~~~~g------~--pd~i~~d~~G~lwva~~ 271 (360)
+....+ +|++++.++.+ .+.+...... . ...+++.++|.+++...
T Consensus 258 ~~~~~~~~~l~~~~~~~~~---~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~ 312 (662)
T 3azo_A 258 ATDRTGWWNLHRVDPATGA---ATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG 312 (662)
T ss_dssp EECTTSSCEEEEECTTTCC---EEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB
T ss_pred EECCCCCeEEEEEECCCCc---eeecccccccccCccccccCceEeEeCCCEEEEEEE
Confidence 544344 78888874432 1111111000 1 23566777788766543
No 203
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.70 E-value=0.03 Score=55.13 Aligned_cols=50 Identities=14% Similarity=0.347 Sum_probs=36.4
Q ss_pred EEEcCCCCEEEEecCCeEEEEE--CCeeeEEE-----------------ecCCeEEEEeC------CCcEEEEc-CCC
Q 018144 84 ASMDKNGVIYTATRDGWIKRLQ--DGTWVNWK-----------------FIDSHLIICDN------ANGLHKVS-EDG 135 (360)
Q Consensus 84 i~~d~~G~l~v~~~~G~I~~~~--~g~~~~~~-----------------~~~g~L~v~~~------~~gl~~~~-~~g 135 (360)
++++ ++.||+++.+|.|+.+| +|+.. |. ..++.+|++.. ...++.+| .+|
T Consensus 111 ~~~~-~~~v~v~~~dg~l~alD~~tG~~~-W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG 186 (571)
T 2ad6_A 111 LAYG-AGQIVKKQANGHLLALDAKTGKIN-WEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTG 186 (571)
T ss_dssp CEEE-TTEEEEECTTSEEEEEETTTCCEE-EEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTC
T ss_pred cEEE-CCEEEEEeCCCEEEEEECCCCCEE-EEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCC
Confidence 3454 77999999999999999 77532 11 12678999875 35688899 788
No 204
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.69 E-value=0.0092 Score=54.75 Aligned_cols=136 Identities=12% Similarity=0.051 Sum_probs=82.0
Q ss_pred CcceEEEcC-CC-CEEEEecCCeEEEEE-CC-eeeEEE-------------e-cC-CeEEEEeCCCcEEEEcCCC--eEE
Q 018144 80 HPEDASMDK-NG-VIYTATRDGWIKRLQ-DG-TWVNWK-------------F-ID-SHLIICDNANGLHKVSEDG--VEN 138 (360)
Q Consensus 80 ~Pe~i~~d~-~G-~l~v~~~~G~I~~~~-~g-~~~~~~-------------~-~~-g~L~v~~~~~gl~~~~~~g--~~~ 138 (360)
.-.++++.+ ++ .|++++.+|.|..++ .+ ....+. . ++ ..|+.++.+..+..++-++ ...
T Consensus 120 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 199 (383)
T 3ei3_B 120 AITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFK 199 (383)
T ss_dssp BEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEE
T ss_pred ceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEE
Confidence 445778877 44 455666889888888 43 222221 1 12 3355555455555566333 433
Q ss_pred EeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCC----CeEEEEeCCCcCcceEE
Q 018144 139 FLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS----NITTLVADGFYFANGVA 213 (360)
Q Consensus 139 l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t----g~~~~~~~~l~~pngia 213 (360)
+... . ..+..+++.++|. ++++- ...+.|..+|..+ ++.............++
T Consensus 200 ~~~h-~----~~v~~~~~~~~~~~~l~s~-----------------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 257 (383)
T 3ei3_B 200 EKLH-K----AKVTHAEFNPRCDWLMATS-----------------SVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAY 257 (383)
T ss_dssp EECS-S----SCEEEEEECSSCTTEEEEE-----------------ETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEE
T ss_pred eccC-C----CcEEEEEECCCCCCEEEEE-----------------eCCCEEEEEeCCCCCcccceEEEecCCCceEEEE
Confidence 3211 1 3577899999997 66652 2356788888765 44433333344678899
Q ss_pred Eec-CCCEEEEEeCCCCEEEEEEecC
Q 018144 214 LSR-DEDYVVVCESWKFRCRKYWLKG 238 (360)
Q Consensus 214 ~~~-dg~~l~v~~t~~~~i~~~~~~g 238 (360)
+++ +++.++.+.. .+.|..+++..
T Consensus 258 ~s~~~~~~l~~~~~-d~~i~iwd~~~ 282 (383)
T 3ei3_B 258 FNPTDSTKLLTTDQ-RNEIRVYSSYD 282 (383)
T ss_dssp ECTTTSCEEEEEES-SSEEEEEETTB
T ss_pred EcCCCCCEEEEEcC-CCcEEEEECCC
Confidence 999 9986665554 57899999864
No 205
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=97.69 E-value=0.0028 Score=59.19 Aligned_cols=170 Identities=12% Similarity=0.136 Sum_probs=98.6
Q ss_pred CCcceEEEcC--CCCEEEEecCC----eEEEEE-CCe-ee---------------------E---EEec----CCeEEEE
Q 018144 79 NHPEDASMDK--NGVIYTATRDG----WIKRLQ-DGT-WV---------------------N---WKFI----DSHLIIC 122 (360)
Q Consensus 79 ~~Pe~i~~d~--~G~l~v~~~~G----~I~~~~-~g~-~~---------------------~---~~~~----~g~L~v~ 122 (360)
..-.+|++|+ ++.||+++..| .|++.+ .|+ ++ . +... .++||++
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g 134 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAG 134 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEE
Confidence 3467899998 78999999777 899886 331 11 1 2221 5789998
Q ss_pred eCCCcEEEEcCCC--eEEEeecc--C------------CccccccccEEEcC--CCcEEEEeCCCCCCCccceecccccC
Q 018144 123 DNANGLHKVSEDG--VENFLSYV--N------------GSKLRFANDVVEAS--DGSLYFTVSSSKYLPHEYCLDILEGK 184 (360)
Q Consensus 123 ~~~~gl~~~~~~g--~~~l~~~~--~------------~~~~~~~n~l~~d~--dG~l~vtd~~~~~~~~~~~~~~~~~~ 184 (360)
....||++.+..| .+.+.... . +.....+..|++|+ .++||++.
T Consensus 135 ~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~------------------ 196 (394)
T 3b7f_A 135 TSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGM------------------ 196 (394)
T ss_dssp EETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEE------------------
T ss_pred ecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEE------------------
Confidence 8777888887555 44432110 0 01112345788886 46899953
Q ss_pred CccEEEEEcCCCCeEEEEeCCC-------------cCcceEEEecC-CCEEEEEeCCCCEEEEEEecCCcCcceeeeccC
Q 018144 185 PHGQLLKYDPSSNITTLVADGF-------------YFANGVALSRD-EDYVVVCESWKFRCRKYWLKGERKGKLETFAEN 250 (360)
Q Consensus 185 ~~g~l~~~d~~tg~~~~~~~~l-------------~~pngia~~~d-g~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~ 250 (360)
..++|++.+......+.+..++ .....|+++++ .+.+|+... ..|++.+-.|.. .+.+...
T Consensus 197 ~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~--~gl~~s~D~G~t---W~~~~~~ 271 (394)
T 3b7f_A 197 SSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH--CGIYRMDRREGV---WKRIGDA 271 (394)
T ss_dssp ETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET--TEEEEEETTTTE---EECGGGG
T ss_pred CCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC--CeEEEeCCCCCc---ceECCCC
Confidence 2356888876544555443221 12456788875 356888764 468887644432 2222111
Q ss_pred CCC----CCceeEEc--CCCCEEEEEe
Q 018144 251 LPG----APDNINLA--PDGTFWIAII 271 (360)
Q Consensus 251 ~~g----~pd~i~~d--~~G~lwva~~ 271 (360)
++. +...+++| ..+.+|++..
T Consensus 272 l~~~~~~~~~~i~~~p~~~~~l~~~t~ 298 (394)
T 3b7f_A 272 MPREVGDIGFPIVVHQRDPRTVWVFPM 298 (394)
T ss_dssp SCTTTCSCEEEEEECSSCTTCEEEEEC
T ss_pred CCCCCccceEEEEECCCCCCEEEEEec
Confidence 221 11246677 4678999864
No 206
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.67 E-value=0.024 Score=56.06 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=29.9
Q ss_pred ceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCCC
Q 018144 307 GAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTS 351 (360)
Q Consensus 307 ~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~ 351 (360)
.+.+..+|. +|+++..+..+.+.... + .+.+.+|++|++...+
T Consensus 493 dg~l~A~D~~tG~~lW~~~l~~g~~~~-P-~~y~~~G~qyv~~~~G 536 (599)
T 1w6s_A 493 DGYLKARDSDTGDLLWKFKIPSGAIGY-P-MTYTHKGTQYVAIYYG 536 (599)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCCCSC-C-EEEEETTEEEEEEEEC
T ss_pred CCeEEEEECCCCCEEEEeeCCCCcEec-c-EEEEeCCEEEEEEEcc
Confidence 468999995 79999999887765222 2 2235789999876543
No 207
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.66 E-value=0.029 Score=50.29 Aligned_cols=169 Identities=11% Similarity=0.105 Sum_probs=90.9
Q ss_pred CCcceEEEcCCC-C-EEEEecCCeEEEEE-CC---e----eeEE----------Ee-cCCe-EEEEeCCCcEEEEc-CCC
Q 018144 79 NHPEDASMDKNG-V-IYTATRDGWIKRLQ-DG---T----WVNW----------KF-IDSH-LIICDNANGLHKVS-EDG 135 (360)
Q Consensus 79 ~~Pe~i~~d~~G-~-l~v~~~~G~I~~~~-~g---~----~~~~----------~~-~~g~-L~v~~~~~gl~~~~-~~g 135 (360)
..-.++++.+++ . |..++.||.|..++ .+ + ...+ .. .+|+ |..+..++-+..++ .++
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~ 97 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATG 97 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 345667777643 4 55666888877665 21 1 1111 11 2344 44455445555566 666
Q ss_pred --eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEE
Q 018144 136 --VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVA 213 (360)
Q Consensus 136 --~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia 213 (360)
...+. ... ..+..++++++|.+.++- ...+.|..+|........+.........++
T Consensus 98 ~~~~~~~-~h~----~~v~~~~~~~~~~~l~s~-----------------s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~ 155 (319)
T 3frx_A 98 ETYQRFV-GHK----SDVMSVDIDKKASMIISG-----------------SRDKTIKVWTIKGQCLATLLGHNDWVSQVR 155 (319)
T ss_dssp EEEEEEE-CCS----SCEEEEEECTTSCEEEEE-----------------ETTSCEEEEETTSCEEEEECCCSSCEEEEE
T ss_pred CeeEEEc-cCC----CcEEEEEEcCCCCEEEEE-----------------eCCCeEEEEECCCCeEEEEeccCCcEEEEE
Confidence 33332 111 246788999999877762 235667778876444444433333456677
Q ss_pred EecCCC-----EEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 214 LSRDED-----YVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 214 ~~~dg~-----~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
+.+.+. ..+++....+.|..+++...+ ....+. ...+....+++.++|++.++...
T Consensus 156 ~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~-~h~~~v~~~~~sp~g~~l~s~~~ 216 (319)
T 3frx_A 156 VVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ--IEADFI-GHNSNINTLTASPDGTLIASAGK 216 (319)
T ss_dssp ECCC------CCEEEEEETTSCEEEEETTTTE--EEEEEC-CCCSCEEEEEECTTSSEEEEEET
T ss_pred EccCCCCCCCccEEEEEeCCCEEEEEECCcch--hheeec-CCCCcEEEEEEcCCCCEEEEEeC
Confidence 776432 144444455678888875321 111221 22233556788899986665443
No 208
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.66 E-value=0.024 Score=49.78 Aligned_cols=212 Identities=9% Similarity=0.056 Sum_probs=109.7
Q ss_pred CCcceEEEcCCC-CEEEEecCCeEEEEE--CCeeeE-E----------E-ecCC-eEEEEeCCCcEEEEc-CCC--eEEE
Q 018144 79 NHPEDASMDKNG-VIYTATRDGWIKRLQ--DGTWVN-W----------K-FIDS-HLIICDNANGLHKVS-EDG--VENF 139 (360)
Q Consensus 79 ~~Pe~i~~d~~G-~l~v~~~~G~I~~~~--~g~~~~-~----------~-~~~g-~L~v~~~~~gl~~~~-~~g--~~~l 139 (360)
..-.++++ +++ .|.+++.+|.|..++ +++... + . .+++ .|+++..+.-+..++ .+. .+.+
T Consensus 19 ~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~ 97 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPL 97 (313)
T ss_dssp SCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-
T ss_pred CCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcc
Confidence 44556777 544 566677899888888 443221 1 1 1233 344554444344444 211 1111
Q ss_pred eeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEE-EEeCCCcCcceEEEec-C
Q 018144 140 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT-LVADGFYFANGVALSR-D 217 (360)
Q Consensus 140 ~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~-~~~~~l~~pngia~~~-d 217 (360)
.. ..+. ...+..+.+ +++..++ +...+.|..+|. ++.. .+.........+++.+ +
T Consensus 98 ~~-~~~~-~~~i~~~~~--~~~~l~~-----------------~~~d~~i~~~d~--~~~~~~~~~~~~~v~~~~~~~~~ 154 (313)
T 3odt_A 98 YT-LIGH-QGNVCSLSF--QDGVVIS-----------------GSWDKTAKVWKE--GSLVYNLQAHNASVWDAKVVSFS 154 (313)
T ss_dssp CE-ECCC-SSCEEEEEE--ETTEEEE-----------------EETTSEEEEEET--TEEEEEEECCSSCEEEEEEEETT
T ss_pred cc-hhhc-ccCEEEEEe--cCCEEEE-----------------EeCCCCEEEEcC--CcEEEecccCCCceeEEEEccCC
Confidence 11 0111 123455666 3444443 233567888883 4333 3333344556788877 7
Q ss_pred CCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCcc
Q 018144 218 EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 297 (360)
Q Consensus 218 g~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 297 (360)
++.++.+.. .+.|..++.. .....+..........+.+.++|.+..+...
T Consensus 155 ~~~l~~~~~-d~~i~i~d~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d------------------------- 204 (313)
T 3odt_A 155 ENKFLTASA-DKTIKLWQND----KVIKTFSGIHNDVVRHLAVVDDGHFISCSND------------------------- 204 (313)
T ss_dssp TTEEEEEET-TSCEEEEETT----EEEEEECSSCSSCEEEEEEEETTEEEEEETT-------------------------
T ss_pred CCEEEEEEC-CCCEEEEecC----ceEEEEeccCcccEEEEEEcCCCeEEEccCC-------------------------
Confidence 876665554 5678888732 1222232223344567888888886555544
Q ss_pred ccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCCeEEEEeC
Q 018144 298 FSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 298 ~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~~~l 359 (360)
+.|..+|. +++.+..+....+ .++.+... +++|+.++ ....|..+++
T Consensus 205 ----------g~i~i~d~~~~~~~~~~~~~~~----~i~~~~~~~~~~l~~~~-~dg~v~iwd~ 253 (313)
T 3odt_A 205 ----------GLIKLVDMHTGDVLRTYEGHES----FVYCIKLLPNGDIVSCG-EDRTVRIWSK 253 (313)
T ss_dssp ----------SEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSCEEEEE-TTSEEEEECT
T ss_pred ----------CeEEEEECCchhhhhhhhcCCc----eEEEEEEecCCCEEEEe-cCCEEEEEEC
Confidence 46667774 4677766654333 35666665 35555444 3445555543
No 209
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.65 E-value=0.002 Score=54.94 Aligned_cols=147 Identities=15% Similarity=0.050 Sum_probs=90.0
Q ss_pred hhcccceEecCCCCCCcceEEEcCCCCEEEEecCCeEEEEE--CC-------e------------eeEEEecCCeEEEEe
Q 018144 65 TQLQDFIKVGEGSVNHPEDASMDKNGVIYTATRDGWIKRLQ--DG-------T------------WVNWKFIDSHLIICD 123 (360)
Q Consensus 65 ~~l~~~~~~~~~~~~~Pe~i~~d~~G~l~v~~~~G~I~~~~--~g-------~------------~~~~~~~~g~L~v~~ 123 (360)
.-+..+.+++.+.+..-.+++++++|.||.. .+|.||+++ ++ . ...+.+.+|.||+.+
T Consensus 27 ~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav~ 105 (236)
T 1tl2_A 27 NWLARATLIGKGGWSNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAVS 105 (236)
T ss_dssp CHHHHSEEEESSSCTTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEEE
T ss_pred chhhhccccCccccccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEeC
Confidence 3446778888866788899999999999998 889999998 31 1 112345688999884
Q ss_pred CCCcEEEEc-C-CC-eEEEe--eccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCC-CC
Q 018144 124 NANGLHKVS-E-DG-VENFL--SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SN 197 (360)
Q Consensus 124 ~~~gl~~~~-~-~g-~~~l~--~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-tg 197 (360)
+..|++++ + ++ -..+. +.+..........|.++++|.||..+ .+.+++-.+- +.
T Consensus 106 -dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-------------------dg~lyr~~~P~~~ 165 (236)
T 1tl2_A 106 -KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-------------------GQQFYKALPPVSN 165 (236)
T ss_dssp -TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-------------------TTEEEEECCCSST
T ss_pred -CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-------------------CCcEEecCCCCCC
Confidence 56688888 3 33 22221 11111112345788999999999964 3456553332 11
Q ss_pred ------eEEEEe-CCCcCcceEEEecCCCEEEEEeCCCCEEEEEE
Q 018144 198 ------ITTLVA-DGFYFANGVALSRDEDYVVVCESWKFRCRKYW 235 (360)
Q Consensus 198 ------~~~~~~-~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~ 235 (360)
..+.+. .+...-.-+.+++++. ||.++ ++++++..
T Consensus 166 ~~~wl~~~~~~g~~g~~~yr~l~f~~~G~-l~~v~--~g~~Y~~~ 207 (236)
T 1tl2_A 166 QDNWLARATKIGQGGWDTFKFLFFSSVGT-LFGVQ--GGKFYEDY 207 (236)
T ss_dssp TCCHHHHCEEEESSSGGGEEEEEECTTSC-EEEEE--TTEEEEES
T ss_pred CcccccccceeccCCcceEEEEEECCCCc-EEEEe--CCeEEecC
Confidence 111122 2222222355788886 66666 56787754
No 210
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.65 E-value=0.039 Score=55.30 Aligned_cols=170 Identities=11% Similarity=0.116 Sum_probs=92.9
Q ss_pred CcceEEEcCCCCEE-EEecCCeEEEEE--CCeee-EE----------Ee-cCC-eEEEEeCCCcEEEEcC-CC-eEEEee
Q 018144 80 HPEDASMDKNGVIY-TATRDGWIKRLQ--DGTWV-NW----------KF-IDS-HLIICDNANGLHKVSE-DG-VENFLS 141 (360)
Q Consensus 80 ~Pe~i~~d~~G~l~-v~~~~G~I~~~~--~g~~~-~~----------~~-~~g-~L~v~~~~~gl~~~~~-~g-~~~l~~ 141 (360)
.-.++++.++|.+. .++.+|.|..++ +++.. .+ .. +++ .|..++.++.+..++. .. ...+..
T Consensus 432 ~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~ 511 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISE 511 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECS
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeecc
Confidence 34567788877654 455788888777 44321 11 11 223 3444444444444552 22 222211
Q ss_pred ccCCccccccccEEEcCCC--cEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-CcCcceEEEecCC
Q 018144 142 YVNGSKLRFANDVVEASDG--SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVALSRDE 218 (360)
Q Consensus 142 ~~~~~~~~~~n~l~~d~dG--~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-l~~pngia~~~dg 218 (360)
...+. ...+..+++.+++ ...++ +...+.|..+|..+++......+ ....+.+++++|+
T Consensus 512 ~~~~h-~~~v~~~~~~~~~~~~~l~s-----------------~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg 573 (694)
T 3dm0_A 512 GGEGH-RDWVSCVRFSPNTLQPTIVS-----------------ASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG 573 (694)
T ss_dssp STTSC-SSCEEEEEECSCSSSCEEEE-----------------EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred CCCCC-CCcEEEEEEeCCCCcceEEE-----------------EeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCC
Confidence 11111 1245677777766 34443 23356788888877766544433 3456789999999
Q ss_pred CEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 219 DYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 219 ~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
+.+..+. ..+.|..+++...+ ....-........+++.++|.+.++...
T Consensus 574 ~~l~sg~-~Dg~i~iwd~~~~~----~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 622 (694)
T 3dm0_A 574 SLCASGG-KDGVVLLWDLAEGK----KLYSLEANSVIHALCFSPNRYWLCAATE 622 (694)
T ss_dssp SEEEEEE-TTSBCEEEETTTTE----EEECCBCSSCEEEEEECSSSSEEEEEET
T ss_pred CEEEEEe-CCCeEEEEECCCCc----eEEEecCCCcEEEEEEcCCCcEEEEEcC
Confidence 8555444 45678888875321 1111112234566888888876665544
No 211
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.64 E-value=0.024 Score=52.40 Aligned_cols=168 Identities=11% Similarity=-0.004 Sum_probs=98.3
Q ss_pred CCcceEEEcC-CCCEE-EEecCCeEEEEE--CCe--------eeEE----------Ee-cCC--eEEEEeCCCcEEEEc-
Q 018144 79 NHPEDASMDK-NGVIY-TATRDGWIKRLQ--DGT--------WVNW----------KF-IDS--HLIICDNANGLHKVS- 132 (360)
Q Consensus 79 ~~Pe~i~~d~-~G~l~-v~~~~G~I~~~~--~g~--------~~~~----------~~-~~g--~L~v~~~~~gl~~~~- 132 (360)
..-.++++.+ ++.+. +++.+|.|..++ ++. ...+ .. +++ .|+.++.++.+..++
T Consensus 82 ~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 161 (402)
T 2aq5_A 82 APVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDV 161 (402)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEET
T ss_pred CCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEEC
Confidence 3456788887 66554 555889888888 431 1111 11 233 345555555566677
Q ss_pred CCC--eEEEe-eccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe-CCCc-
Q 018144 133 EDG--VENFL-SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFY- 207 (360)
Q Consensus 133 ~~g--~~~l~-~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~-~~l~- 207 (360)
.++ ...+. ... ...+..+++.++|...++ +...+.|..+|..+++..... ....
T Consensus 162 ~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~-----------------~~~d~~i~iwd~~~~~~~~~~~~~~~~ 220 (402)
T 2aq5_A 162 GTGAAVLTLGPDVH----PDTIYSVDWSRDGALICT-----------------SCRDKRVRVIEPRKGTVVAEKDRPHEG 220 (402)
T ss_dssp TTTEEEEEECTTTC----CSCEEEEEECTTSSCEEE-----------------EETTSEEEEEETTTTEEEEEEECSSCS
T ss_pred CCCCccEEEecCCC----CCceEEEEECCCCCEEEE-----------------EecCCcEEEEeCCCCceeeeeccCCCC
Confidence 566 33331 111 134678899999976664 223578999998877765443 2322
Q ss_pred -CcceEEEecCCCEEEEEe--CCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEE
Q 018144 208 -FANGVALSRDEDYVVVCE--SWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWI 268 (360)
Q Consensus 208 -~pngia~~~dg~~l~v~~--t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwv 268 (360)
.+..+++++|++.++++. +..+.|..+++...... ..............+.++++|++.+
T Consensus 221 ~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~ 283 (402)
T 2aq5_A 221 TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEP-LSLQELDTSSGVLLPFFDPDTNIVY 283 (402)
T ss_dssp SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSC-SEEEECCCCSSCEEEEEETTTTEEE
T ss_pred CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCC-ceEEeccCCCceeEEEEcCCCCEEE
Confidence 368899999987554442 45677888887643221 1111111223456788899887554
No 212
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.64 E-value=0.01 Score=60.21 Aligned_cols=168 Identities=13% Similarity=0.083 Sum_probs=94.8
Q ss_pred CCcceEEEcCCCC-EEEEecCCeEEEEE--CCee-eEE----------Ee-cCC-eEEEEeCCCcEEEEc-CCC--eEEE
Q 018144 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW-VNW----------KF-IDS-HLIICDNANGLHKVS-EDG--VENF 139 (360)
Q Consensus 79 ~~Pe~i~~d~~G~-l~v~~~~G~I~~~~--~g~~-~~~----------~~-~~g-~L~v~~~~~gl~~~~-~~g--~~~l 139 (360)
....++++.++|. |.+++.+|.|..++ +++. ..+ .. +++ .|..++.++.+..++ .++ ....
T Consensus 56 ~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 135 (814)
T 3mkq_A 56 TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT 135 (814)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEE
T ss_pred CcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEE
Confidence 3456788888776 55666889888888 4432 111 11 233 355555444455555 433 2111
Q ss_pred eeccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE-EeCC-CcCcceEEEec
Q 018144 140 LSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADG-FYFANGVALSR 216 (360)
Q Consensus 140 ~~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~-~~~~-l~~pngia~~~ 216 (360)
..... ..+..+++.+ +|...++ +...|.|..+|..+++... +... ....+.+++++
T Consensus 136 ~~~~~----~~v~~~~~~p~~~~~l~~-----------------~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 194 (814)
T 3mkq_A 136 FEGHE----HFVMCVAFNPKDPSTFAS-----------------GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYP 194 (814)
T ss_dssp EECCS----SCEEEEEEETTEEEEEEE-----------------EETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECC
T ss_pred EcCCC----CcEEEEEEEcCCCCEEEE-----------------EeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEE
Confidence 11111 2467788888 7766664 2335778888876554332 2222 25567899998
Q ss_pred --CCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEe
Q 018144 217 --DEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 271 (360)
Q Consensus 217 --dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 271 (360)
++..++++ +..+.|..++....+ ....+. ...+....+++.++|.+.++..
T Consensus 195 ~~~~~~l~~~-~~dg~i~~~d~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~ 247 (814)
T 3mkq_A 195 LPDKPYMITA-SDDLTIKIWDYQTKS--CVATLE-GHMSNVSFAVFHPTLPIIISGS 247 (814)
T ss_dssp STTCCEEEEE-CTTSEEEEEETTTTE--EEEEEE-CCSSCEEEEEECSSSSEEEEEE
T ss_pred CCCCCEEEEE-eCCCEEEEEECCCCc--EEEEEc-CCCCCEEEEEEcCCCCEEEEEe
Confidence 88755554 456788888875422 122221 2223345677888887555443
No 213
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.64 E-value=0.036 Score=50.67 Aligned_cols=137 Identities=9% Similarity=0.004 Sum_probs=79.4
Q ss_pred CCcceEEEcC-CC-CEEEEecCCeEEEEE--CCeeeEE-E---------e-c---CC-eEEEEeCCCcEEEEc-CCC--e
Q 018144 79 NHPEDASMDK-NG-VIYTATRDGWIKRLQ--DGTWVNW-K---------F-I---DS-HLIICDNANGLHKVS-EDG--V 136 (360)
Q Consensus 79 ~~Pe~i~~d~-~G-~l~v~~~~G~I~~~~--~g~~~~~-~---------~-~---~g-~L~v~~~~~gl~~~~-~~g--~ 136 (360)
....++++.+ ++ .+..++.+|.|..++ +++.... . . . ++ .++++..+..+..++ .++ .
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 179 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS 179 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee
Confidence 3456778877 55 455666889898888 4432211 1 1 0 22 355555555666677 555 3
Q ss_pred EEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCe--EEEE-----------
Q 018144 137 ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI--TTLV----------- 202 (360)
Q Consensus 137 ~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~--~~~~----------- 202 (360)
..+. ... ..+..+++.++|. ++++ +...|.|..+|..+++ ...+
T Consensus 180 ~~~~-~~~----~~v~~~~~~~~~~~ll~~-----------------~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 237 (408)
T 4a11_B 180 HILQ-GHR----QEILAVSWSPRYDYILAT-----------------ASADSRVKLWDVRRASGCLITLDQHNGKKSQAV 237 (408)
T ss_dssp EEEC-CCC----SCEEEEEECSSCTTEEEE-----------------EETTSCEEEEETTCSSCCSEECCTTTTCSCCCT
T ss_pred eeec-CCC----CcEEEEEECCCCCcEEEE-----------------EcCCCcEEEEECCCCCcccccccccccccceee
Confidence 3332 111 2467888999886 5554 2234567777765442 1111
Q ss_pred ----eCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecC
Q 018144 203 ----ADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG 238 (360)
Q Consensus 203 ----~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g 238 (360)
.........++++++++.++.+.. .+.|..+++..
T Consensus 238 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~vwd~~~ 276 (408)
T 4a11_B 238 ESANTAHNGKVNGLCFTSDGLHLLTVGT-DNRMRLWNSSN 276 (408)
T ss_dssp TTSSCSCSSCEEEEEECTTSSEEEEEET-TSCEEEEETTT
T ss_pred ccccccccCceeEEEEcCCCCEEEEecC-CCeEEEEECCC
Confidence 011224568999999987766665 56788888764
No 214
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.64 E-value=0.03 Score=50.29 Aligned_cols=144 Identities=6% Similarity=0.060 Sum_probs=86.9
Q ss_pred EecCCCCCCcceEEEcC-----CCCEEEEecCCeEEEEE-C-Ce-eeEE---------------Ee-cC----Ce-EEEE
Q 018144 72 KVGEGSVNHPEDASMDK-----NGVIYTATRDGWIKRLQ-D-GT-WVNW---------------KF-ID----SH-LIIC 122 (360)
Q Consensus 72 ~~~~~~~~~Pe~i~~d~-----~G~l~v~~~~G~I~~~~-~-g~-~~~~---------------~~-~~----g~-L~v~ 122 (360)
.+..+--..-.++++.+ +..++++..+|.|..++ . ++ ...+ .. .+ |+ |+++
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 44444334556778875 33477777788887777 2 32 1111 11 12 33 4455
Q ss_pred eCCCcEEEEc-CCC--eEEEeeccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCe
Q 018144 123 DNANGLHKVS-EDG--VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI 198 (360)
Q Consensus 123 ~~~~gl~~~~-~~g--~~~l~~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~ 198 (360)
..++.+..++ .++ ...+. ... ..+..+++.+ ++++.++ +...|.|..+|..+++
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~-~~~----~~i~~~~~~~~~~~~l~s-----------------~~~dg~i~iwd~~~~~ 149 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYV-GHG----NAINELKFHPRDPNLLLS-----------------VSKDHALRLWNIQTDT 149 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEE-SCC----SCEEEEEECSSCTTEEEE-----------------EETTSCEEEEETTTTE
T ss_pred cCCCEEEEEEchhceEeeeec-CCC----CcEEEEEECCCCCCEEEE-----------------EeCCCeEEEEEeecCe
Confidence 5444566666 555 33332 111 3477889998 7877665 2335778899988777
Q ss_pred EEEEe----CCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecC
Q 018144 199 TTLVA----DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG 238 (360)
Q Consensus 199 ~~~~~----~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g 238 (360)
..... ........++++++++.++.+.. .+.|..+++..
T Consensus 150 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i~d~~~ 192 (366)
T 3k26_A 150 LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGM-DHSLKLWRINS 192 (366)
T ss_dssp EEEEECSTTSCSSCEEEEEECTTSSEEEEEET-TSCEEEEESCS
T ss_pred EEEEecccccccCceeEEEECCCCCEEEEecC-CCCEEEEECCC
Confidence 65544 22345678999999986666654 56788888753
No 215
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.63 E-value=0.015 Score=53.18 Aligned_cols=167 Identities=10% Similarity=0.096 Sum_probs=88.4
Q ss_pred cCCCCEEEEe-cCCeEEEEE-CCeeeEEEec--------------CC----eEEEEeCC---CcEEEE--c-CCC-eEEE
Q 018144 87 DKNGVIYTAT-RDGWIKRLQ-DGTWVNWKFI--------------DS----HLIICDNA---NGLHKV--S-EDG-VENF 139 (360)
Q Consensus 87 d~~G~l~v~~-~~G~I~~~~-~g~~~~~~~~--------------~g----~L~v~~~~---~gl~~~--~-~~g-~~~l 139 (360)
|+...+++++ ..++|+.++ +|+....... +| .+++++.. +.+..| + .++ ++.+
T Consensus 37 dp~~s~ii~t~k~~gL~Vydl~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 37 TPQNSKLITTNKKSGLVVYSLDGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp CGGGCEEEEEETTTEEEEEETTSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred CCCccEEEEEcCCCCEEEEcCCCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 3344566666 667788888 6653322110 12 24666654 334444 5 344 4444
Q ss_pred eecc-C-CccccccccEEE--cCC-Cc--EEEEeCCCCCCCccceecccccCCccEEEEEcC---CCCeEE----EEeCC
Q 018144 140 LSYV-N-GSKLRFANDVVE--ASD-GS--LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP---SSNITT----LVADG 205 (360)
Q Consensus 140 ~~~~-~-~~~~~~~n~l~~--d~d-G~--l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~---~tg~~~----~~~~~ 205 (360)
.... + +..+..|+++|. +++ |. +|+++. .|++..|+. ..|+++ ....-
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k------------------~G~~~q~~l~~~~~g~~~~~lVR~f~l 178 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK------------------EGEFEQYELKADKNGYISGKKVRAFKM 178 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS------------------SSEEEEEEEEECTTSCEEEEEEEEEEC
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC------------------CCeEEEEEEEeCCCCcccceEEEEecC
Confidence 2110 0 122367999999 764 54 666542 245544332 223221 11122
Q ss_pred CcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeec----cCCCCCCceeEEc--CCCC--EEEEEec
Q 018144 206 FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFA----ENLPGAPDNINLA--PDGT--FWIAIIK 272 (360)
Q Consensus 206 l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~----~~~~g~pd~i~~d--~~G~--lwva~~~ 272 (360)
...|.|+++++....||+++.. ..|++|+.+.....+.+.+. ..+..-+.||++. ++|. |++++.+
T Consensus 179 gsq~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG 252 (355)
T 3amr_A 179 NSQTEGMAADDEYGRLYIAEED-EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQG 252 (355)
T ss_dssp SSCEEEEEEETTTTEEEEEETT-TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGG
T ss_pred CCCcceEEEcCCCCeEEEeccc-ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCC
Confidence 3578899999988899999987 56999996533211112221 1122246788883 4443 5555544
No 216
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.63 E-value=0.0084 Score=60.36 Aligned_cols=100 Identities=11% Similarity=0.175 Sum_probs=61.4
Q ss_pred CCCEEEEecCCeEEEEE--CCeeeE----------------------EEecCCeEEEEeCCCcEEEEc-CCC-eEEEeec
Q 018144 89 NGVIYTATRDGWIKRLQ--DGTWVN----------------------WKFIDSHLIICDNANGLHKVS-EDG-VENFLSY 142 (360)
Q Consensus 89 ~G~l~v~~~~G~I~~~~--~g~~~~----------------------~~~~~g~L~v~~~~~gl~~~~-~~g-~~~l~~~ 142 (360)
+|.||+++.++.|+.+| +|+..- ....+++||+++.+..|+.+| .+| ...-...
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 156 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNT 156 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEET
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeecC
Confidence 78999999889999999 675320 112367899998778899999 788 3322221
Q ss_pred c-CCcc-ccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE
Q 018144 143 V-NGSK-LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL 201 (360)
Q Consensus 143 ~-~~~~-~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~ 201 (360)
. +... ........+ .+|.+|++.....+ ...|.|+.||..||+...
T Consensus 157 ~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~------------~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 157 FEGQKGSLTITGAPRV-FKGKVIIGNGGAEY------------GVRGYITAYDAETGERKW 204 (677)
T ss_dssp TTTCCSSCBCCSCCEE-ETTEEEECCBCTTT------------CCBCEEEEEETTTCCEEE
T ss_pred CcCcCcCcccccCcEE-ECCEEEEEeccccc------------CCCCEEEEEECCCCcEEE
Confidence 1 1000 011111223 25789996543111 124789999999898754
No 217
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.61 E-value=0.025 Score=60.48 Aligned_cols=171 Identities=16% Similarity=0.162 Sum_probs=97.4
Q ss_pred CCcceEEEcCCCCEEE-EecCCeEEEEE--CCeee-----------EEEe-cCCe-EEEEeCCCcEEEEc-CCC--eEEE
Q 018144 79 NHPEDASMDKNGVIYT-ATRDGWIKRLQ--DGTWV-----------NWKF-IDSH-LIICDNANGLHKVS-EDG--VENF 139 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v-~~~~G~I~~~~--~g~~~-----------~~~~-~~g~-L~v~~~~~gl~~~~-~~g--~~~l 139 (360)
..-.++++.++|.+.+ ++.+|.|..++ +++.. .+.. ++|+ |..++.++.+..++ .++ ...+
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~ 695 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTY 695 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 3455778888886554 45888888888 44321 1222 2343 44555445566667 566 3333
Q ss_pred eeccCCccccccccEEEcCC--CcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-CcCcceEEEec
Q 018144 140 LSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVALSR 216 (360)
Q Consensus 140 ~~~~~~~~~~~~n~l~~d~d--G~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-l~~pngia~~~ 216 (360)
. ... ..+..+++.++ +.+.++ +...+.|..+|..+++......+ ....+.+++++
T Consensus 696 ~-~~~----~~v~~~~~~~~~~~~~l~s-----------------g~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp 753 (1249)
T 3sfz_A 696 D-EHS----EQVNCCHFTNKSNHLLLAT-----------------GSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSP 753 (1249)
T ss_dssp E-CCS----SCEEEEEECSSSSCCEEEE-----------------EETTSCEEEEETTSSSEEEEECCCSSCEEEEEECS
T ss_pred c-CCC----CcEEEEEEecCCCceEEEE-----------------EeCCCeEEEEECCCcchhheecCCCCCEEEEEEec
Confidence 2 111 24567778774 345554 23356788899887776543333 34567899999
Q ss_pred CCCEEEEEeCCCCEEEEEEecCCcC-cceee---e------ccCCCCCCceeEEcCCCCEEEEEec
Q 018144 217 DEDYVVVCESWKFRCRKYWLKGERK-GKLET---F------AENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 217 dg~~l~v~~t~~~~i~~~~~~g~~~-~~~~~---~------~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
+++.++.+. ..+.|..+++..... ..... + ..........+++.++|...++...
T Consensus 754 ~~~~l~s~s-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~ 818 (1249)
T 3sfz_A 754 DDELLASCS-ADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK 818 (1249)
T ss_dssp STTEEEEEE-SSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEET
T ss_pred CCCEEEEEE-CCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcC
Confidence 998665554 456788888753311 11100 0 0001113456778889987666544
No 218
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.61 E-value=0.014 Score=54.92 Aligned_cols=173 Identities=13% Similarity=0.093 Sum_probs=97.4
Q ss_pred CCcceEEEcCC-CC-EEEEecCCeEEEEE--C----------Cee-eEE----------Ee-cCC--eEEEEeCCCcEEE
Q 018144 79 NHPEDASMDKN-GV-IYTATRDGWIKRLQ--D----------GTW-VNW----------KF-IDS--HLIICDNANGLHK 130 (360)
Q Consensus 79 ~~Pe~i~~d~~-G~-l~v~~~~G~I~~~~--~----------g~~-~~~----------~~-~~g--~L~v~~~~~gl~~ 130 (360)
..+.++++.++ +. |++++.+|.|..++ . .+. ..+ .. +.+ .|..+..++.+..
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 208 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICL 208 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEE
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEE
Confidence 46778888886 44 45556889898888 3 111 111 11 122 3444444444555
Q ss_pred Ec-CCC---eEEEe--eccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCe----E
Q 018144 131 VS-EDG---VENFL--SYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI----T 199 (360)
Q Consensus 131 ~~-~~g---~~~l~--~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~----~ 199 (360)
++ .++ ...+. ....+. ...++++++.+ ++.++++.+ ..|.|..+|..++. .
T Consensus 209 wd~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~l~s~~-----------------~dg~i~i~d~~~~~~~~~~ 270 (430)
T 2xyi_A 209 WDINATPKEHRVIDAKNIFTGH-TAVVEDVAWHLLHESLFGSVA-----------------DDQKLMIWDTRNNNTSKPS 270 (430)
T ss_dssp EETTSCCBGGGEEECSEEECCC-SSCEEEEEECSSCTTEEEEEE-----------------TTSEEEEEETTCSCSSSCS
T ss_pred EeCCCCCCCCceeccceeecCC-CCCEeeeEEeCCCCCEEEEEe-----------------CCCeEEEEECCCCCCCcce
Confidence 66 332 11110 111111 13477889988 567777632 35788889887552 2
Q ss_pred EEEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC-EEEEEe
Q 018144 200 TLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAII 271 (360)
Q Consensus 200 ~~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~ 271 (360)
..+......++.++++++++.++++....+.|..|++.... .....+. ...+....+.+.++|. ++++..
T Consensus 271 ~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-~~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~ 341 (430)
T 2xyi_A 271 HTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK-LKLHSFE-SHKDEIFQVQWSPHNETILASSG 341 (430)
T ss_dssp EEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-SCSEEEE-CCSSCEEEEEECSSCTTEEEEEE
T ss_pred eEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-CCeEEee-cCCCCEEEEEECCCCCCEEEEEe
Confidence 22323344678999999988666666667789999986421 1122222 2233456788888884 555443
No 219
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.57 E-value=0.05 Score=50.35 Aligned_cols=158 Identities=10% Similarity=-0.022 Sum_probs=88.6
Q ss_pred EEEcCCCCEEEEecCCeEEEEE--CCeeeEE------------Ee-cCC-eEEEEeCCCcEEEEc-CCC--eEEEeeccC
Q 018144 84 ASMDKNGVIYTATRDGWIKRLQ--DGTWVNW------------KF-IDS-HLIICDNANGLHKVS-EDG--VENFLSYVN 144 (360)
Q Consensus 84 i~~d~~G~l~v~~~~G~I~~~~--~g~~~~~------------~~-~~g-~L~v~~~~~gl~~~~-~~g--~~~l~~~~~ 144 (360)
+..++ +.+.+++.+|.|+.++ +++.... .. +++ .|.++..++.+..++ .++ ...+. ...
T Consensus 99 ~~~s~-~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~ 176 (401)
T 4aez_A 99 LDWSN-LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA-GHQ 176 (401)
T ss_dssp EEECT-TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCS
T ss_pred EeecC-CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec-CCC
Confidence 44543 5677777888888888 5543221 11 133 455555555566666 555 33332 111
Q ss_pred CccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCC-Ce-EEEEeCCCcCcceEEEecCCCEEE
Q 018144 145 GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NI-TTLVADGFYFANGVALSRDEDYVV 222 (360)
Q Consensus 145 ~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t-g~-~~~~~~~l~~pngia~~~dg~~l~ 222 (360)
..+..+.++ +++.++ +...|.|..+|..+ +. ...+........+++++++++.++
T Consensus 177 ----~~v~~~~~~--~~~l~~-----------------~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 233 (401)
T 4aez_A 177 ----ARVGCLSWN--RHVLSS-----------------GSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLA 233 (401)
T ss_dssp ----SCEEEEEEE--TTEEEE-----------------EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred ----CceEEEEEC--CCEEEE-----------------EcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEE
Confidence 234566663 444443 23457788888763 22 233333344678899999998666
Q ss_pred EEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC-EEEEE
Q 018144 223 VCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAI 270 (360)
Q Consensus 223 v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~ 270 (360)
.+.. .+.|..+++...+ ....+. ........+++.++|. +.++.
T Consensus 234 s~~~-d~~v~iwd~~~~~--~~~~~~-~~~~~v~~~~~~p~~~~ll~~~ 278 (401)
T 4aez_A 234 SGGN-DNVVQIWDARSSI--PKFTKT-NHNAAVKAVAWCPWQSNLLATG 278 (401)
T ss_dssp EEET-TSCEEEEETTCSS--EEEEEC-CCSSCCCEEEECTTSTTEEEEE
T ss_pred EEeC-CCeEEEccCCCCC--ccEEec-CCcceEEEEEECCCCCCEEEEe
Confidence 6554 5678888875421 111221 2333467788888774 55543
No 220
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.55 E-value=0.022 Score=51.25 Aligned_cols=137 Identities=13% Similarity=0.049 Sum_probs=76.1
Q ss_pred CcceEEEcCC----C-CEEEEecCCeEEEEE--CCeee-----------EEEe-c-CCe-EEEEeCCCcEEEEc-CCC--
Q 018144 80 HPEDASMDKN----G-VIYTATRDGWIKRLQ--DGTWV-----------NWKF-I-DSH-LIICDNANGLHKVS-EDG-- 135 (360)
Q Consensus 80 ~Pe~i~~d~~----G-~l~v~~~~G~I~~~~--~g~~~-----------~~~~-~-~g~-L~v~~~~~gl~~~~-~~g-- 135 (360)
.-.++++.++ | .|.+++.+|.|..++ +++.. .+.. + ++. |..++.++.+..++ .++
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 150 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL 150 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE
Confidence 3456777766 3 356666889888887 44321 1222 2 344 45555455566677 566
Q ss_pred eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEE-------------
Q 018144 136 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV------------- 202 (360)
Q Consensus 136 ~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~------------- 202 (360)
...+. ...+. ...+..++++++|...++- ...|.|..+|..+++....
T Consensus 151 ~~~~~-~~~~~-~~~v~~~~~~~~~~~l~~~-----------------~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 211 (366)
T 3k26_A 151 VAIFG-GVEGH-RDEVLSADYDLLGEKIMSC-----------------GMDHSLKLWRINSKRMMNAIKESYDYNPNKTN 211 (366)
T ss_dssp EEEEC-STTSC-SSCEEEEEECTTSSEEEEE-----------------ETTSCEEEEESCSHHHHHHHHHHHTCCGGGCS
T ss_pred EEEec-ccccc-cCceeEEEECCCCCEEEEe-----------------cCCCCEEEEECCCCccccccceeEEecCCCCc
Confidence 33331 11111 1357788999998766642 2345677777664432110
Q ss_pred ----------------eCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecC
Q 018144 203 ----------------ADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG 238 (360)
Q Consensus 203 ----------------~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g 238 (360)
.........++++ ++ ++++.+..+.|..+++..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~~wd~~~ 260 (366)
T 3k26_A 212 RPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD-LILSKSCENAIVCWKPGK 260 (366)
T ss_dssp SCCCCEEECCCSEEECSSCSSCCCEEEEE--TT-EEEEECSSSEEEEEEESS
T ss_pred ccccceeeccCccccccCCcceEEEEEEc--CC-EEEEEecCCEEEEEeCCC
Confidence 0012235677887 55 445555577898888754
No 221
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.53 E-value=0.023 Score=50.80 Aligned_cols=169 Identities=9% Similarity=0.030 Sum_probs=91.0
Q ss_pred CCcceEEEcCCCC-EEEEecCCeEEEEE--CCe----eeEE----------Ee-cCCe--EEEEeCCCcEEEEcC-CC--
Q 018144 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGT----WVNW----------KF-IDSH--LIICDNANGLHKVSE-DG-- 135 (360)
Q Consensus 79 ~~Pe~i~~d~~G~-l~v~~~~G~I~~~~--~g~----~~~~----------~~-~~g~--L~v~~~~~gl~~~~~-~g-- 135 (360)
..-.++++.++|. |++++.+|.|..++ +++ .... .. +++. |+.+..++.+..++- ..
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~ 91 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS 91 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc
Confidence 3456778887765 55666888887777 333 2211 11 2344 666665555666663 33
Q ss_pred eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCC---------CeEEEEeCCC
Q 018144 136 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS---------NITTLVADGF 206 (360)
Q Consensus 136 ~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t---------g~~~~~~~~l 206 (360)
...+.... . ...+..+++.+ +...++- ...+.|..+|..+ ++........
T Consensus 92 ~~~~~~~~--~-~~~v~~l~~~~-~~~l~s~-----------------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 150 (342)
T 1yfq_A 92 FQALTNNE--A-NLGICRICKYG-DDKLIAA-----------------SWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVK 150 (342)
T ss_dssp EEECBSCC--C-CSCEEEEEEET-TTEEEEE-----------------ETTSEEEEECHHHHTTBCEEEEESCSSSSSSC
T ss_pred eEeccccC--C-CCceEEEEeCC-CCEEEEE-----------------cCCCeEEEEcccccccccccccCCeeeEEeeC
Confidence 32221100 1 13467788888 7666642 2356777777643 2211111122
Q ss_pred cCcceEEEecCCCEEEEEeCCCCEEEEEEecC-CcCcceeeeccCCCCCCceeEEcC-CCCEEEEEec
Q 018144 207 YFANGVALSRDEDYVVVCESWKFRCRKYWLKG-ERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIK 272 (360)
Q Consensus 207 ~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g-~~~~~~~~~~~~~~g~pd~i~~d~-~G~lwva~~~ 272 (360)
..+..+++++++ ++++. ..+.|..|++.. .... ...........+..+.+.+ +|++.+....
T Consensus 151 ~~v~~~~~~~~~--l~~~~-~d~~i~i~d~~~~~~~~-~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~ 214 (342)
T 1yfq_A 151 NKIFTMDTNSSR--LIVGM-NNSQVQWFRLPLCEDDN-GTIEESGLKYQIRDVALLPKEQEGYACSSI 214 (342)
T ss_dssp CCEEEEEECSSE--EEEEE-STTEEEEEESSCCTTCC-CEEEECSCSSCEEEEEECSGGGCEEEEEET
T ss_pred CceEEEEecCCc--EEEEe-CCCeEEEEECCcccccc-ceeeecCCCCceeEEEECCCCCCEEEEEec
Confidence 345678888876 55554 456899999865 2211 1112112333456788888 8875554433
No 222
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.53 E-value=0.00084 Score=64.41 Aligned_cols=108 Identities=19% Similarity=0.225 Sum_probs=67.3
Q ss_pred ccccccEEEcCCCc--EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCe----EEEE----eCC-----CcCcceE
Q 018144 148 LRFANDVVEASDGS--LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI----TTLV----ADG-----FYFANGV 212 (360)
Q Consensus 148 ~~~~n~l~~d~dG~--l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~----~~~~----~~~-----l~~pngi 212 (360)
+..|.+|++.+||. |||++. .|+|+.++++... +..+ ..+ ....-||
T Consensus 13 L~~P~~~a~~pdG~~rl~V~er------------------~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgi 74 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILEK------------------EGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSL 74 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEET------------------TTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEE
T ss_pred CCCceEEEECCCCCeEEEEEeC------------------CceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceee
Confidence 35688999999985 999752 4789999865321 1111 111 2345689
Q ss_pred EEecC---CCEEEEEeCCC------------CEEEEEEecCC---c--CcceeeeccCC-CC---CCceeEEcCCCCEEE
Q 018144 213 ALSRD---EDYVVVCESWK------------FRCRKYWLKGE---R--KGKLETFAENL-PG---APDNINLAPDGTFWI 268 (360)
Q Consensus 213 a~~~d---g~~l~v~~t~~------------~~i~~~~~~g~---~--~~~~~~~~~~~-~g---~pd~i~~d~~G~lwv 268 (360)
+++|+ +..+|++.+.. .+|.||..+.. . ....+++.+.. +. ....|++++||.|||
T Consensus 75 a~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv 154 (463)
T 2wg3_C 75 AFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYI 154 (463)
T ss_dssp EECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEE
T ss_pred EeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEE
Confidence 99986 34688886521 48999988632 1 12233332211 11 234589999999999
Q ss_pred EEecC
Q 018144 269 AIIKL 273 (360)
Q Consensus 269 a~~~~ 273 (360)
++...
T Consensus 155 ~~Gd~ 159 (463)
T 2wg3_C 155 ILGDG 159 (463)
T ss_dssp EECCT
T ss_pred EeCCC
Confidence 98764
No 223
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.53 E-value=0.035 Score=59.43 Aligned_cols=168 Identities=14% Similarity=0.121 Sum_probs=97.0
Q ss_pred CCcceEEEcCCCCEE-EEecCCeEEEEE--CCeee-EE----------Eec---CCeEE-EEeCCCcEEEEc-CCC--eE
Q 018144 79 NHPEDASMDKNGVIY-TATRDGWIKRLQ--DGTWV-NW----------KFI---DSHLI-ICDNANGLHKVS-EDG--VE 137 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~-v~~~~G~I~~~~--~g~~~-~~----------~~~---~g~L~-v~~~~~gl~~~~-~~g--~~ 137 (360)
....++++.++|... +++.+|.|..++ +++.. .+ ... ++.+. .++.++.+..++ .++ ..
T Consensus 658 ~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~ 737 (1249)
T 3sfz_A 658 DEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRN 737 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEE
T ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhh
Confidence 345678888887654 455889888888 55322 11 111 22233 333334455566 555 33
Q ss_pred EEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC-------------
Q 018144 138 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD------------- 204 (360)
Q Consensus 138 ~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~------------- 204 (360)
.+. .. ...+..+++.++|...++- ...|.|..+|..+++......
T Consensus 738 ~~~-~h----~~~v~~~~~sp~~~~l~s~-----------------s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 795 (1249)
T 3sfz_A 738 TMF-GH----TNSVNHCRFSPDDELLASC-----------------SADGTLRLWDVRSANERKSINVKRFFLSSEDPPE 795 (1249)
T ss_dssp EEC-CC----SSCEEEEEECSSTTEEEEE-----------------ESSSEEEEEEGGGTEEEEEEECCCCC--------
T ss_pred eec-CC----CCCEEEEEEecCCCEEEEE-----------------ECCCeEEEEeCCCCcccceecccccccccCCccc
Confidence 321 11 1347788999999877753 235677778776554432211
Q ss_pred -CCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 205 -GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 205 -~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
.......+++++||+.++++. .+.+..++..... ....+.....+....+.++++|++.++...
T Consensus 796 ~~~~~v~~~~~s~dg~~l~~~~--~~~v~~~d~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 860 (1249)
T 3sfz_A 796 DVEVIVKCCSWSADGDKIIVAA--KNKVLLFDIHTSG--LLAEIHTGHHSTIQYCDFSPYDHLAVIALS 860 (1249)
T ss_dssp CCCCCBCCCCBCTTSSEEEEEE--TTEEEEEETTTCC--EEEEEECSSSSCCCEEEECSSTTEEEEECS
T ss_pred cccceEEEEEECCCCCEEEEEc--CCcEEEEEecCCC--ceeEEcCCCCCceEEEEEcCCCCEEEEEeC
Confidence 011356788999999777766 4678888875432 122222223344667888999987665544
No 224
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.53 E-value=0.033 Score=54.95 Aligned_cols=60 Identities=25% Similarity=0.391 Sum_probs=37.1
Q ss_pred cceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEe
Q 018144 209 ANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 271 (360)
Q Consensus 209 pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 271 (360)
++.++++|||+.+..+. ..+.|..+++++......... ...+....+++.++|.+.++..
T Consensus 451 v~~va~spdg~~lasgs-~D~~v~lwd~~~~~~~~~~~~--~h~~~v~~v~fspdg~~las~s 510 (611)
T 1nr0_A 451 SSCVALSNDKQFVAVGG-QDSKVHVYKLSGASVSEVKTI--VHPAEITSVAFSNNGAFLVATD 510 (611)
T ss_dssp EEEEEECTTSCEEEEEE-TTSEEEEEEEETTEEEEEEEE--ECSSCEEEEEECTTSSEEEEEE
T ss_pred ceEEEEeCCCCEEEEeC-CCCeEEEEEccCCceeeeecc--CCCCceEEEEECCCCCEEEEEc
Confidence 46788999998655554 456788888765322111111 2333456788899998666544
No 225
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.50 E-value=0.041 Score=54.26 Aligned_cols=41 Identities=10% Similarity=0.093 Sum_probs=29.2
Q ss_pred eEEEEECC-CCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCC
Q 018144 308 AHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLT 350 (360)
Q Consensus 308 ~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~ 350 (360)
+.+..+|. +|+++..+..+.+.... + .+.+.+|++|++...
T Consensus 507 g~l~A~D~~tG~~lW~~~~~~g~~a~-P-~~y~~~G~qYv~~~~ 548 (582)
T 1flg_A 507 GYFKAFDAKSGKELWKFQTGSGIVSP-P-ITWEQDGEQYLGVTV 548 (582)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSC-C-EEEEETTEEEEEEEE
T ss_pred CcEEEEECCCCCEEEEecCCCCcccC-c-eEEEECCEEEEEEEc
Confidence 68999995 79999999887764221 2 223478999998543
No 226
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.48 E-value=0.014 Score=53.44 Aligned_cols=121 Identities=12% Similarity=0.035 Sum_probs=65.3
Q ss_pred cEEEEc-CCC-eEEEeeccCCccccccccEEEcC-CCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEE
Q 018144 127 GLHKVS-EDG-VENFLSYVNGSKLRFANDVVEAS-DGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV 202 (360)
Q Consensus 127 gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~-dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~ 202 (360)
.++.++ .++ .+.+.... ..+..+.+.+ +|. |+++.... . ......|+.+|.++++.+.+
T Consensus 169 ~l~~~d~~~g~~~~~~~~~-----~~~~~~~~sp~dg~~l~~~~~~~-~-----------~~~~~~l~~~d~~~~~~~~l 231 (396)
T 3c5m_A 169 RLIKVDIETGELEVIHQDT-----AWLGHPIYRPFDDSTVGFCHEGP-H-----------DLVDARMWLVNEDGSNVRKI 231 (396)
T ss_dssp EEEEEETTTCCEEEEEEES-----SCEEEEEEETTEEEEEEEEECSC-S-----------SSCSCCCEEEETTSCCCEES
T ss_pred eEEEEECCCCcEEeeccCC-----cccccceECCCCCCEEEEEecCC-C-----------CCCCceEEEEECCCCceeEe
Confidence 466666 555 44443211 2345677888 664 55542110 0 00114688899876666555
Q ss_pred eCC--CcCcceEEEecCCCEEEEEeC--CCC--EEEEEEecCCcCcceeeeccCCCCCCceeEEcC-CCCEEEEE
Q 018144 203 ADG--FYFANGVALSRDEDYVVVCES--WKF--RCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAI 270 (360)
Q Consensus 203 ~~~--l~~pngia~~~dg~~l~v~~t--~~~--~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~-~G~lwva~ 270 (360)
... ...+..++++|||+.|+++.. ... .|+++++++.+ ...+. ..++. +..+.+ +|++++..
T Consensus 232 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~---~~~l~-~~~~~--~~~~s~~dg~~l~~~ 300 (396)
T 3c5m_A 232 KEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE---NEEVM-VMPPC--SHLMSNFDGSLMVGD 300 (396)
T ss_dssp SCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC---EEEEE-ECCSE--EEEEECSSSSEEEEE
T ss_pred eccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCC---eEEee-eCCCC--CCCccCCCCceEEEe
Confidence 432 223566899999986655532 222 38888875432 22222 12221 267777 89866543
No 227
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.48 E-value=0.036 Score=54.74 Aligned_cols=172 Identities=10% Similarity=0.033 Sum_probs=92.2
Q ss_pred CCcceEEEcCCCCEEEEecCCeEEEEE--CCee-----------eEEEe-cCCeEEE-EeCCCcEEEEc-CCC--e-EEE
Q 018144 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DGTW-----------VNWKF-IDSHLII-CDNANGLHKVS-EDG--V-ENF 139 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v~~~~G~I~~~~--~g~~-----------~~~~~-~~g~L~v-~~~~~gl~~~~-~~g--~-~~l 139 (360)
..|..++++++|...+...++.|...+ +++. ..+.+ ++|++.+ ++.++-+...+ .++ . ...
T Consensus 19 g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~ 98 (611)
T 1nr0_A 19 GTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTT 98 (611)
T ss_dssp TCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEE
T ss_pred CceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEe
Confidence 467888899998765554456676666 3321 12222 3455333 33333344455 333 1 111
Q ss_pred eeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEE-EEeCCCcCcceEEEecCC
Q 018144 140 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT-LVADGFYFANGVALSRDE 218 (360)
Q Consensus 140 ~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~-~~~~~l~~pngia~~~dg 218 (360)
..... ..+++++++++|...++-+.. ....+.|..+|. ++.. .+.......+.++++|++
T Consensus 99 ~~~~~----~~v~~v~fs~dg~~l~~~~~~-------------~~~~~~v~~wd~--~~~~~~l~gh~~~v~~v~f~p~~ 159 (611)
T 1nr0_A 99 IPVFS----GPVKDISWDSESKRIAAVGEG-------------RERFGHVFLFDT--GTSNGNLTGQARAMNSVDFKPSR 159 (611)
T ss_dssp EECSS----SCEEEEEECTTSCEEEEEECC-------------SSCSEEEEETTT--CCBCBCCCCCSSCEEEEEECSSS
T ss_pred ecccC----CceEEEEECCCCCEEEEEECC-------------CCceeEEEEeeC--CCCcceecCCCCCceEEEECCCC
Confidence 11111 247889999999866643210 011246777763 3221 122223356789999998
Q ss_pred CEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 219 DYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 219 ~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
...+++.+..+.|..++....+ ....+. ........+++.++|.+.++...
T Consensus 160 ~~~l~s~s~D~~v~lwd~~~~~--~~~~l~-~H~~~V~~v~fspdg~~las~s~ 210 (611)
T 1nr0_A 160 PFRIISGSDDNTVAIFEGPPFK--FKSTFG-EHTKFVHSVRYNPDGSLFASTGG 210 (611)
T ss_dssp SCEEEEEETTSCEEEEETTTBE--EEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred CeEEEEEeCCCeEEEEECCCCe--Eeeeec-cccCceEEEEECCCCCEEEEEEC
Confidence 7555565556677777753211 112222 22334567888999987665443
No 228
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.48 E-value=0.072 Score=50.06 Aligned_cols=170 Identities=7% Similarity=-0.020 Sum_probs=100.8
Q ss_pred CCeEEEEeCCCcEEEEc-CCC--eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEE
Q 018144 116 DSHLIICDNANGLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKY 192 (360)
Q Consensus 116 ~g~L~v~~~~~gl~~~~-~~g--~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~ 192 (360)
+..|.++..++.+..++ .++ ...+. .. ...+..++++++|...++ +...|.|..+
T Consensus 280 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~----~~~v~~~~~~~~~~~l~s-----------------g~~dg~i~vw 337 (464)
T 3v7d_B 280 GNIVVSGSYDNTLIVWDVAQMKCLYILS-GH----TDRIYSTIYDHERKRCIS-----------------ASMDTTIRIW 337 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEEC-CC----SSCEEEEEEETTTTEEEE-----------------EETTSCEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEec-CC----CCCEEEEEEcCCCCEEEE-----------------EeCCCcEEEE
Confidence 34466666555666677 555 33331 11 134678889999876665 2335778899
Q ss_pred cCCCCeEEEEeCC-CcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEe
Q 018144 193 DPSSNITTLVADG-FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 271 (360)
Q Consensus 193 d~~tg~~~~~~~~-l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 271 (360)
|..+++......+ ......++++ ++.++.+. ..+.|..+++.... . .+..........+++.++|++.++..
T Consensus 338 d~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s-~dg~v~vwd~~~~~--~--~~~~~~~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 338 DLENGELMYTLQGHTALVGLLRLS--DKFLVSAA-ADGSIRGWDANDYS--R--KFSYHHTNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEE-TTSEEEEEETTTCC--E--EEEEECTTCCCEEEEEECSSEEEEEE
T ss_pred ECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEe-CCCcEEEEECCCCc--e--eeeecCCCCccEEEEEeCCCEEEEec
Confidence 9887876544333 2334566665 45455444 46788888875422 1 11111222345567788888766554
Q ss_pred cCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEEC-CCCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCC
Q 018144 272 KLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLT 350 (360)
Q Consensus 272 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~ 350 (360)
. +.|..+| .+|+.+..+.... ...+..+..+++.+.+++-.
T Consensus 411 d-----------------------------------g~i~iwd~~~g~~~~~~~~~~---~~~v~~v~~~~~~l~~~~~~ 452 (464)
T 3v7d_B 411 E-----------------------------------NQFNIYNLRSGKLVHANILKD---ADQIWSVNFKGKTLVAAVEK 452 (464)
T ss_dssp T-----------------------------------TEEEEEETTTCCEEESCTTTT---CSEEEEEEEETTEEEEEEEE
T ss_pred C-----------------------------------CeEEEEECCCCcEEehhhccC---CCcEEEEEecCCEEEEEEEe
Confidence 4 4677777 4677766433322 24577888888888877655
Q ss_pred CC
Q 018144 351 SN 352 (360)
Q Consensus 351 ~~ 352 (360)
+.
T Consensus 453 ~g 454 (464)
T 3v7d_B 453 DG 454 (464)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 229
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.48 E-value=0.027 Score=50.94 Aligned_cols=104 Identities=10% Similarity=0.013 Sum_probs=65.6
Q ss_pred ccccEEEcC--CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC--CcCcceEEEecCCCEEEEEe
Q 018144 150 FANDVVEAS--DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FYFANGVALSRDEDYVVVCE 225 (360)
Q Consensus 150 ~~n~l~~d~--dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~--l~~pngia~~~dg~~l~v~~ 225 (360)
.+..+++.+ +|++.++ +...|.|..+|..+++....... ....+.++++||+.. +++.
T Consensus 127 ~v~~~~~~~~~~~~~l~s-----------------~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~-lasg 188 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIW-----------------ADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLL-LALY 188 (343)
T ss_dssp CEEEEECCC---CCEEEE-----------------EETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCE-EEEE
T ss_pred CEEEEEcCCCCCCCEEEE-----------------EeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCE-EEEE
Confidence 367788888 8887775 23357788899887776443322 224678999999984 4444
Q ss_pred CCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 226 SWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 226 t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
+..+.|..+++...+.. ...+.....+....+.+.++|.+.++...
T Consensus 189 ~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs~~g~~l~s~~~ 234 (343)
T 3lrv_A 189 SPDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFADNGYWMVVECD 234 (343)
T ss_dssp CTTSCEEEEESSCTTSC-CEECCCCTTSCEEEEEECTTSSEEEEEES
T ss_pred cCCCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEeCCCCEEEEEeC
Confidence 45678999998643221 01222112344667888999976665544
No 230
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.44 E-value=0.047 Score=50.11 Aligned_cols=154 Identities=12% Similarity=0.065 Sum_probs=90.8
Q ss_pred ccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC---CcCcceEEEecCCCEEEEEeC
Q 018144 150 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG---FYFANGVALSRDEDYVVVCES 226 (360)
Q Consensus 150 ~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~---l~~pngia~~~dg~~l~v~~t 226 (360)
.+++|++.+||.+.++-+ .+.+.+++..+++....... -...+.++++||++.++.+..
T Consensus 178 ~V~~v~fspdg~~l~s~s------------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~ 239 (365)
T 4h5i_A 178 EVKDLHFSTDGKVVAYIT------------------GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASL 239 (365)
T ss_dssp CCCEEEECTTSSEEEEEC------------------SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEE
T ss_pred ceEEEEEccCCceEEecc------------------ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEec
Confidence 478999999998777532 23566777666654332211 223578999999987766654
Q ss_pred CCC---EEEEEEecCCcCcce--eeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCcccccc
Q 018144 227 WKF---RCRKYWLKGERKGKL--ETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQF 301 (360)
Q Consensus 227 ~~~---~i~~~~~~g~~~~~~--~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 301 (360)
.+. .+..++......... ..+. ........+++.++|++.++...
T Consensus 240 d~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~V~~~~~Spdg~~lasgs~----------------------------- 289 (365)
T 4h5i_A 240 KKGKGIVLTKISIKSGNTSVLRSKQVT-NRFKGITSMDVDMKGELAVLASN----------------------------- 289 (365)
T ss_dssp SSSCCEEEEEEEEETTEEEEEEEEEEE-SSCSCEEEEEECTTSCEEEEEET-----------------------------
T ss_pred CCcceeEEeecccccceecceeeeeec-CCCCCeEeEEECCCCCceEEEcC-----------------------------
Confidence 332 355555533211111 1111 12223456788999986654433
Q ss_pred ccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCCeEEEEeC
Q 018144 302 ITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 302 ~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~~~l 359 (360)
.+.|..+|. +++.+..+.. |- ...++++.+. +|++.+..-..+.|.++++
T Consensus 290 -----D~~V~iwd~~~~~~~~~~~~--gH-~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 290 -----DNSIALVKLKDLSMSKIFKQ--AH-SFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp -----TSCEEEEETTTTEEEEEETT--SS-SSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred -----CCEEEEEECCCCcEEEEecC--cc-cCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 245666774 5777766532 21 2357888887 5666666666777877765
No 231
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.44 E-value=0.0032 Score=61.74 Aligned_cols=161 Identities=15% Similarity=0.074 Sum_probs=89.0
Q ss_pred CcceEEEcCCC--CEEEEecCCeEEEEE--CCeeeEEE---------ecCCeEEE-EeCC----CcEEEEc-CCC-eEEE
Q 018144 80 HPEDASMDKNG--VIYTATRDGWIKRLQ--DGTWVNWK---------FIDSHLII-CDNA----NGLHKVS-EDG-VENF 139 (360)
Q Consensus 80 ~Pe~i~~d~~G--~l~v~~~~G~I~~~~--~g~~~~~~---------~~~g~L~v-~~~~----~gl~~~~-~~g-~~~l 139 (360)
+....++.++| .+|++..++.+..++ +|+.+.+. .++|+.++ +... ..++.++ .+| .+.+
T Consensus 111 ~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l 190 (582)
T 3o4h_A 111 PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVF 190 (582)
T ss_dssp SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEE
T ss_pred CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEe
Confidence 33344444444 566665555555666 56543322 13454333 3322 3477777 666 6655
Q ss_pred eeccCCccccccccEEEcCCCcEEEE-eCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCC-cCcceEE----
Q 018144 140 LSYVNGSKLRFANDVVEASDGSLYFT-VSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-YFANGVA---- 213 (360)
Q Consensus 140 ~~~~~~~~~~~~n~l~~d~dG~l~vt-d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l-~~pngia---- 213 (360)
... . ...+.+++++||+..++ +.. ....|+.+|.++++.+ +..+. ..+.+++
T Consensus 191 ~~~-~----~~~~~~~~SpDG~~l~~~~~~----------------~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 191 DSG-E----GSFSSASISPGMKVTAGLETA----------------REARLVTVDPRDGSVE-DLELPSKDFSSYRPTAI 248 (582)
T ss_dssp CCS-S----CEEEEEEECTTSCEEEEEECS----------------SCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEE
T ss_pred ecC-C----CccccceECCCCCEEEEccCC----------------CeeEEEEEcCCCCcEE-EccCCCcChhhhhhccc
Confidence 321 1 23477899999974443 211 1237999999988877 43332 2234455
Q ss_pred ----EecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 214 ----LSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 214 ----~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
++|||. ++++....+.+..|.+ |.. .. ...+....+.++ +|.+++....
T Consensus 249 ~~~~~spdg~-~~~~~~~~g~~~l~~~-g~~----~~---~~~~~v~~~~~s-dg~~l~~~s~ 301 (582)
T 3o4h_A 249 TWLGYLPDGR-LAVVARREGRSAVFID-GER----VE---APQGNHGRVVLW-RGKLVTSHTS 301 (582)
T ss_dssp EEEEECTTSC-EEEEEEETTEEEEEET-TEE----EC---CCSSEEEEEEEE-TTEEEEEEEE
T ss_pred cceeEcCCCc-EEEEEEcCCcEEEEEE-CCe----ec---cCCCceEEEEec-CCEEEEEEcC
Confidence 999995 6666655667777776 321 11 112234467777 7876665443
No 232
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.41 E-value=0.058 Score=49.15 Aligned_cols=164 Identities=13% Similarity=0.146 Sum_probs=96.7
Q ss_pred ceEEEcCCC-CEEEEecCCeEEEEE--CCeee-EE----------Ee---cCC-eEEEEeCCCcEEEEc-CCC--eEEEe
Q 018144 82 EDASMDKNG-VIYTATRDGWIKRLQ--DGTWV-NW----------KF---IDS-HLIICDNANGLHKVS-EDG--VENFL 140 (360)
Q Consensus 82 e~i~~d~~G-~l~v~~~~G~I~~~~--~g~~~-~~----------~~---~~g-~L~v~~~~~gl~~~~-~~g--~~~l~ 140 (360)
.++++.+++ .|..++.+|.|..++ +++.. .+ .. .+| .|+.+..++.+..++ .++ ...+.
T Consensus 158 ~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~ 237 (354)
T 2pbi_B 158 SACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE 237 (354)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 456777766 466677899888888 44321 11 11 123 455555555666677 566 33331
Q ss_pred eccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC---CcCcceEEEecC
Q 018144 141 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG---FYFANGVALSRD 217 (360)
Q Consensus 141 ~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~---l~~pngia~~~d 217 (360)
... ..++.+++.++|...++- ...+.|..+|..+++....... ......++++++
T Consensus 238 -~h~----~~v~~v~~~p~~~~l~s~-----------------s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~ 295 (354)
T 2pbi_B 238 -THE----SDVNSVRYYPSGDAFASG-----------------SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLS 295 (354)
T ss_dssp -CCS----SCEEEEEECTTSSEEEEE-----------------ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred -CCC----CCeEEEEEeCCCCEEEEE-----------------eCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCC
Confidence 111 347789999999877752 2356788888766654333221 224568899999
Q ss_pred CCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEe
Q 018144 218 EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 271 (360)
Q Consensus 218 g~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 271 (360)
++.++.+. ..+.|..++..... ....+. ...+....+++.++|.+.++..
T Consensus 296 g~~l~~g~-~d~~i~vwd~~~~~--~~~~l~-~h~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 296 GRLLFAGY-NDYTINVWDVLKGS--RVSILF-GHENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp SSEEEEEE-TTSCEEEEETTTCS--EEEEEC-CCSSCEEEEEECTTSSCEEEEE
T ss_pred CCEEEEEE-CCCcEEEEECCCCc--eEEEEE-CCCCcEEEEEECCCCCEEEEEc
Confidence 98666555 45678888874321 122222 2233456688899997655443
No 233
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.41 E-value=0.01 Score=54.67 Aligned_cols=139 Identities=15% Similarity=0.172 Sum_probs=82.9
Q ss_pred CcceEEEcCCCCEEEEecCCeEEEEE--CCeee-------------EEE-ecCCe-EEEEeCCC--c--EEEEc-CCC-e
Q 018144 80 HPEDASMDKNGVIYTATRDGWIKRLQ--DGTWV-------------NWK-FIDSH-LIICDNAN--G--LHKVS-EDG-V 136 (360)
Q Consensus 80 ~Pe~i~~d~~G~l~v~~~~G~I~~~~--~g~~~-------------~~~-~~~g~-L~v~~~~~--g--l~~~~-~~g-~ 136 (360)
.-.++++.++|.+.+...++.+.+++ +++.. .+. .++|. +..+...+ + +..++ ..+ .
T Consensus 178 ~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~ 257 (365)
T 4h5i_A 178 EVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNT 257 (365)
T ss_dssp CCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEE
T ss_pred ceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccccee
Confidence 35688999999888777677788877 44321 111 12444 33333332 2 22333 333 2
Q ss_pred EEEe-eccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE-EeCC-CcCcceEE
Q 018144 137 ENFL-SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADG-FYFANGVA 213 (360)
Q Consensus 137 ~~l~-~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~-~~~~-l~~pngia 213 (360)
.... ....+. ...++.+++.+||++.++ +..++.|..+|..+++... +..+ ....+.++
T Consensus 258 ~~~~~~~~~~~-~~~V~~~~~Spdg~~las-----------------gs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~ 319 (365)
T 4h5i_A 258 SVLRSKQVTNR-FKGITSMDVDMKGELAVL-----------------ASNDNSIALVKLKDLSMSKIFKQAHSFAITEVT 319 (365)
T ss_dssp EEEEEEEEESS-CSCEEEEEECTTSCEEEE-----------------EETTSCEEEEETTTTEEEEEETTSSSSCEEEEE
T ss_pred cceeeeeecCC-CCCeEeEEECCCCCceEE-----------------EcCCCEEEEEECCCCcEEEEecCcccCCEEEEE
Confidence 2111 111111 134678899999987775 3345778899998887644 3333 33568999
Q ss_pred EecCCCEEEEEeCCCCEEEEEEec
Q 018144 214 LSRDEDYVVVCESWKFRCRKYWLK 237 (360)
Q Consensus 214 ~~~dg~~l~v~~t~~~~i~~~~~~ 237 (360)
|+|||+.| ++.+..+.|..+++.
T Consensus 320 fSpdg~~l-aS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 320 ISPDSTYV-ASVSAANTIHIIKLP 342 (365)
T ss_dssp ECTTSCEE-EEEETTSEEEEEECC
T ss_pred ECCCCCEE-EEEeCCCeEEEEEcC
Confidence 99999844 555556788888874
No 234
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.38 E-value=0.04 Score=55.26 Aligned_cols=41 Identities=10% Similarity=0.251 Sum_probs=28.6
Q ss_pred eEEEEECC-CCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCC
Q 018144 308 AHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLT 350 (360)
Q Consensus 308 ~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~ 350 (360)
+.|..+|. .|+++..+..+.+.... +. ....+|++|++...
T Consensus 479 g~l~a~d~~tG~~l~~~~~~~~~~~~-p~-~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 479 GQMHAYSADKGEALWQFEAQSGIVAA-PM-TFELAGRQYVAIMA 520 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSC-CE-EEEETTEEEEEEEE
T ss_pred ccchhhhhhcChhheEecCCCCcccC-ce-EEEECCEEEEEEEe
Confidence 68899985 69999999887654222 22 22578999987654
No 235
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.38 E-value=0.043 Score=54.98 Aligned_cols=168 Identities=15% Similarity=0.146 Sum_probs=92.5
Q ss_pred CcceEEEcCC-CC-EEEEecCCeEEEEE-C-C-----e-----------eeEEEe-cCCe-EEEEeCCCcEEEEc-CCC-
Q 018144 80 HPEDASMDKN-GV-IYTATRDGWIKRLQ-D-G-----T-----------WVNWKF-IDSH-LIICDNANGLHKVS-EDG- 135 (360)
Q Consensus 80 ~Pe~i~~d~~-G~-l~v~~~~G~I~~~~-~-g-----~-----------~~~~~~-~~g~-L~v~~~~~gl~~~~-~~g- 135 (360)
.-.+|++.++ +. |..++.||.|..++ + + . +..+.. ++|+ |..++.++.+..++ .++
T Consensus 384 ~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~ 463 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGV 463 (694)
T ss_dssp CEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred eeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 3456677654 34 45566888887776 2 1 1 111111 2444 44444444455566 566
Q ss_pred -eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC----CcCcc
Q 018144 136 -VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG----FYFAN 210 (360)
Q Consensus 136 -~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~----l~~pn 210 (360)
...+. ... ..+..+++.++|+..+|- ...+.|..+|..+.....+... ....+
T Consensus 464 ~~~~~~-~h~----~~v~~~~~s~~~~~l~s~-----------------s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~ 521 (694)
T 3dm0_A 464 STRRFV-GHT----KDVLSVAFSLDNRQIVSA-----------------SRDRTIKLWNTLGECKYTISEGGEGHRDWVS 521 (694)
T ss_dssp EEEEEE-CCS----SCEEEEEECTTSSCEEEE-----------------ETTSCEEEECTTSCEEEEECSSTTSCSSCEE
T ss_pred ceeEEe-CCC----CCEEEEEEeCCCCEEEEE-----------------eCCCEEEEEECCCCcceeeccCCCCCCCcEE
Confidence 33332 111 246788999999766652 2356677788654433333221 12356
Q ss_pred eEEEecCCC-EEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 211 GVALSRDED-YVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 211 gia~~~dg~-~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
.+++++++. .++++.+..+.|..+++...+. ...+. ...+....++++++|++.++...
T Consensus 522 ~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~--~~~~~-~h~~~v~~v~~spdg~~l~sg~~ 581 (694)
T 3dm0_A 522 CVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL--RSTLA-GHTGYVSTVAVSPDGSLCASGGK 581 (694)
T ss_dssp EEEECSCSSSCEEEEEETTSCEEEEETTTCCE--EEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEeCCCCcceEEEEeCCCeEEEEECCCCcE--EEEEc-CCCCCEEEEEEeCCCCEEEEEeC
Confidence 889999862 2445555567788888754321 12221 23344567888999987665543
No 236
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.38 E-value=0.0055 Score=61.56 Aligned_cols=56 Identities=11% Similarity=-0.043 Sum_probs=38.3
Q ss_pred cccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCc-------------------Ccc
Q 018144 151 ANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFY-------------------FAN 210 (360)
Q Consensus 151 ~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~-------------------~pn 210 (360)
+..+++++||+ |.++. .+.|+.+|.++++...+..... ...
T Consensus 116 ~~~~~~SPdG~~la~~~-------------------~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~ 176 (723)
T 1xfd_A 116 LQYAGWGPKGQQLIFIF-------------------ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHI 176 (723)
T ss_dssp CSBCCBCSSTTCEEEEE-------------------TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSE
T ss_pred ccccEECCCCCEEEEEE-------------------CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcc
Confidence 56778999995 44431 2478999988777665543211 225
Q ss_pred eEEEecCCCEEEEEe
Q 018144 211 GVALSRDEDYVVVCE 225 (360)
Q Consensus 211 gia~~~dg~~l~v~~ 225 (360)
+++++|||+.|+++.
T Consensus 177 ~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 177 AHWWSPDGTRLAYAA 191 (723)
T ss_dssp EEEECTTSSEEEEEE
T ss_pred eEEECCCCCEEEEEE
Confidence 799999999887765
No 237
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.37 E-value=0.059 Score=50.12 Aligned_cols=104 Identities=10% Similarity=0.067 Sum_probs=62.1
Q ss_pred ccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCC-CeEEEEe--------CCCcCcceEEEecCC-C
Q 018144 150 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NITTLVA--------DGFYFANGVALSRDE-D 219 (360)
Q Consensus 150 ~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t-g~~~~~~--------~~l~~pngia~~~dg-~ 219 (360)
.+..+++.++|++.++ + ..+.|..+|..+ ++..... ......+.++++|++ +
T Consensus 179 ~v~~~~~~~~~~~l~s-----------------~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 240 (447)
T 3dw8_B 179 HINSISINSDYETYLS-----------------A-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN 240 (447)
T ss_dssp CCCEEEECTTSSEEEE-----------------E-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT
T ss_pred ceEEEEEcCCCCEEEE-----------------e-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc
Confidence 5678899999987775 2 356788888762 2222211 112346789999998 7
Q ss_pred EEEEEeCCCCEEEEEEecCCcCc--ceeeeccCCC-----------CCCceeEEcCCCCEEEEEec
Q 018144 220 YVVVCESWKFRCRKYWLKGERKG--KLETFAENLP-----------GAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 220 ~l~v~~t~~~~i~~~~~~g~~~~--~~~~~~~~~~-----------g~pd~i~~d~~G~lwva~~~ 272 (360)
.++.+. ..+.|..+++...+.. ....+..... +....+.++++|.+.++...
T Consensus 241 ~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 241 TFVYSS-SKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp EEEEEE-TTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred EEEEEe-CCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence 555544 4567888887643321 1233321111 13557888999987665443
No 238
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.36 E-value=0.00055 Score=63.59 Aligned_cols=128 Identities=16% Similarity=0.192 Sum_probs=54.9
Q ss_pred EEcCCCCEEEEecCCeEEEEE--CCeeeE-EE---------ecCCeEEEEe-CCCcEEEEc-CCC-e-EEEeeccCCccc
Q 018144 85 SMDKNGVIYTATRDGWIKRLQ--DGTWVN-WK---------FIDSHLIICD-NANGLHKVS-EDG-V-ENFLSYVNGSKL 148 (360)
Q Consensus 85 ~~d~~G~l~v~~~~G~I~~~~--~g~~~~-~~---------~~~g~L~v~~-~~~gl~~~~-~~g-~-~~l~~~~~~~~~ 148 (360)
+++ ++.||+++.+|.|+.+| +|+..- +. ..+|.+|++. .+..++.+| ++| . ..+.........
T Consensus 6 ~v~-~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 6 TLP-ETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ 84 (369)
T ss_dssp --C-TTEEEEEETTSEEEEEETTTCCEEEEEECCCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT
T ss_pred eee-CCEEEEEcCCCEEEEEECCCCCEEEEecCCCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc
Confidence 443 78899999999999999 675331 11 1245567653 445688888 566 3 222111000000
Q ss_pred cccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCCC
Q 018144 149 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK 228 (360)
Q Consensus 149 ~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~~ 228 (360)
..| ++..+|.||+. ...+.|+.+|+++|+....... ......+++++.+|++.. .
T Consensus 85 ~sp---~~~~~~~v~~g------------------~~dg~v~a~D~~tG~~~w~~~~---~~~~~~~p~~~~v~~~~~-d 139 (369)
T 2hz6_A 85 ASP---CRSSDGILYMG------------------KKQDIWYVIDLLTGEKQQTLSS---AFADSLSPSTSLLYLGRT-E 139 (369)
T ss_dssp TCS---CC-----CCCC------------------EEEEEEEEECCC-------------------------EEEEEE-E
T ss_pred cCc---eEecCCEEEEE------------------eCCCEEEEEECCCCcEEEEecC---CCcccccccCCEEEEEec-C
Confidence 111 22235667762 2357899999998876543221 112344556777887754 4
Q ss_pred CEEEEEEecC
Q 018144 229 FRCRKYWLKG 238 (360)
Q Consensus 229 ~~i~~~~~~g 238 (360)
+.|+.++.+.
T Consensus 140 g~v~a~d~~t 149 (369)
T 2hz6_A 140 YTITMYDTKT 149 (369)
T ss_dssp EEEECCCSSS
T ss_pred CEEEEEECCC
Confidence 5788888753
No 239
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.33 E-value=0.054 Score=49.82 Aligned_cols=157 Identities=14% Similarity=0.110 Sum_probs=91.5
Q ss_pred CCEEEEecCCeEEEEE--CCeee-EE---------------Ee--cCCeEEE-EeCCCcEEEEc-C-CC--eEEEeeccC
Q 018144 90 GVIYTATRDGWIKRLQ--DGTWV-NW---------------KF--IDSHLII-CDNANGLHKVS-E-DG--VENFLSYVN 144 (360)
Q Consensus 90 G~l~v~~~~G~I~~~~--~g~~~-~~---------------~~--~~g~L~v-~~~~~gl~~~~-~-~g--~~~l~~~~~ 144 (360)
..|..++.+|.|..++ +++.. .+ .. .++.+++ +..++-+..+| . .+ ...+. ...
T Consensus 171 ~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~-~h~ 249 (380)
T 3iz6_a 171 TRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH-GHE 249 (380)
T ss_dssp SCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC-CCS
T ss_pred CEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC-CcC
Confidence 3577888899888887 44321 11 11 1344444 33334455555 3 22 33331 111
Q ss_pred CccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC--------CcCcceEEEec
Q 018144 145 GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--------FYFANGVALSR 216 (360)
Q Consensus 145 ~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~--------l~~pngia~~~ 216 (360)
..++.+++.++|...+| +...+.|..+|..+++....... ......+++++
T Consensus 250 ----~~v~~v~~~p~~~~l~s-----------------~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 308 (380)
T 3iz6_a 250 ----GDINSVKFFPDGQRFGT-----------------GSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSI 308 (380)
T ss_dssp ----SCCCEEEECTTSSEEEE-----------------ECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECS
T ss_pred ----CCeEEEEEecCCCeEEE-----------------EcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECC
Confidence 35789999999987776 33467788888887765443221 12357899999
Q ss_pred CCCEEEEEeCCCCEEEEEEecCCcCcceeeec---cCCCCCCceeEEcCCCCEEEEEe
Q 018144 217 DEDYVVVCESWKFRCRKYWLKGERKGKLETFA---ENLPGAPDNINLAPDGTFWIAII 271 (360)
Q Consensus 217 dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~---~~~~g~pd~i~~d~~G~lwva~~ 271 (360)
+|+.++.+ ...+.|..++....+ ....+. ....+....+++.++|.+.++..
T Consensus 309 ~g~~l~~g-~~dg~i~vwd~~~~~--~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 363 (380)
T 3iz6_a 309 SGRLLFAG-YSNGDCYVWDTLLAE--MVLNLGTLQNSHEGRISCLGLSSDGSALCTGS 363 (380)
T ss_dssp SSSEEEEE-CTTSCEEEEETTTCC--EEEEECCSCSSCCCCCCEEEECSSSSEEEEEC
T ss_pred CCCEEEEE-ECCCCEEEEECCCCc--eEEEEecccCCCCCceEEEEECCCCCEEEEee
Confidence 99855554 456778888864321 111111 12334466788999998666543
No 240
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.32 E-value=0.088 Score=47.51 Aligned_cols=168 Identities=9% Similarity=0.045 Sum_probs=87.4
Q ss_pred CcceEEEcCCCCEE-EEecCCeEEEEE--CCee-eEEE----------e-cCC-eEEEEeCCCcEEEEc-CCCeEEEeec
Q 018144 80 HPEDASMDKNGVIY-TATRDGWIKRLQ--DGTW-VNWK----------F-IDS-HLIICDNANGLHKVS-EDGVENFLSY 142 (360)
Q Consensus 80 ~Pe~i~~d~~G~l~-v~~~~G~I~~~~--~g~~-~~~~----------~-~~g-~L~v~~~~~gl~~~~-~~g~~~l~~~ 142 (360)
.-.++++.+++.+. .++.+|.|..++ +++. ..+. . +++ .|..+..++.+..++ ..........
T Consensus 78 ~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 157 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAE 157 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCT
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeec
Confidence 44677888887654 455888888887 4432 1221 1 233 344444444454555 3221111111
Q ss_pred cCCccccccccEEEcCCC----------cEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEE-EEeCCCcCcce
Q 018144 143 VNGSKLRFANDVVEASDG----------SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT-LVADGFYFANG 211 (360)
Q Consensus 143 ~~~~~~~~~n~l~~d~dG----------~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~-~~~~~l~~png 211 (360)
..+ ....+..+.+.+++ .+.++ +...+.|..+|.. ++.. .+.......+.
T Consensus 158 ~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~l~s-----------------~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~ 218 (343)
T 2xzm_R 158 KEN-HSDWVSCVRYSPIMKSANKVQPFAPYFAS-----------------VGWDGRLKVWNTN-FQIRYTFKAHESNVNH 218 (343)
T ss_dssp TTS-CSSCEEEEEECCCCCSCSCCCSSCCEEEE-----------------EETTSEEEEEETT-TEEEEEEECCSSCEEE
T ss_pred ccC-CCceeeeeeeccccccccccCCCCCEEEE-----------------EcCCCEEEEEcCC-CceeEEEcCccccceE
Confidence 001 11235566666665 33332 3345778888854 4333 23223345678
Q ss_pred EEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEE
Q 018144 212 VALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAI 270 (360)
Q Consensus 212 ia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~ 270 (360)
++++|||+.|..+. ..+.|..+++..... ....+. .......++++++|.+..+.
T Consensus 219 ~~~s~~g~~l~sgs-~dg~v~iwd~~~~~~-~~~~~~--~~~~v~~v~~sp~~~~la~~ 273 (343)
T 2xzm_R 219 LSISPNGKYIATGG-KDKKLLIWDILNLTY-PQREFD--AGSTINQIAFNPKLQWVAVG 273 (343)
T ss_dssp EEECTTSSEEEEEE-TTCEEEEEESSCCSS-CSEEEE--CSSCEEEEEECSSSCEEEEE
T ss_pred EEECCCCCEEEEEc-CCCeEEEEECCCCcc-cceeec--CCCcEEEEEECCCCCEEEEE
Confidence 99999998655444 467888888732211 111221 11235678888888755433
No 241
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.30 E-value=0.094 Score=47.43 Aligned_cols=169 Identities=13% Similarity=0.145 Sum_probs=88.5
Q ss_pred CcceEEEcCCCCEEEEecCCeEEEEE-CCe-ee--------------EEEecCCeEEEEeCCCcEEEEcCCC--eEEEee
Q 018144 80 HPEDASMDKNGVIYTATRDGWIKRLQ-DGT-WV--------------NWKFIDSHLIICDNANGLHKVSEDG--VENFLS 141 (360)
Q Consensus 80 ~Pe~i~~d~~G~l~v~~~~G~I~~~~-~g~-~~--------------~~~~~~g~L~v~~~~~gl~~~~~~g--~~~l~~ 141 (360)
.-.+|++..++.+|+....|.|++-. .|+ ++ .+...++++|++....++++-+..| .+.+..
T Consensus 37 ~~~~v~~~~~~~~~~~G~~g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~S~DgG~tW~~~~~ 116 (327)
T 2xbg_A 37 TILDMSFIDRHHGWLVGVNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPL 116 (327)
T ss_dssp CEEEEEESSSSCEEEEETTTEEEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTEEEEESSTTSSCEECCC
T ss_pred cEEEEEECCCCcEEEEcCCCeEEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCeEEEECCCCCCceECcc
Confidence 45566666677888766777787765 331 11 1222356788765444454433334 333321
Q ss_pred ccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCC-cCcceEEEecCCCE
Q 018144 142 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-YFANGVALSRDEDY 220 (360)
Q Consensus 142 ~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l-~~pngia~~~dg~~ 220 (360)
.. ..+ ..++.|++.+++++|+.. ..|.|++-+-.....+...... ....++++++++.
T Consensus 117 ~~-~~~-~~~~~i~~~~~~~~~~~~------------------~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~- 175 (327)
T 2xbg_A 117 DP-KLP-GSPRLIKALGNGSAEMIT------------------NVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGE- 175 (327)
T ss_dssp CT-TCS-SCEEEEEEEETTEEEEEE------------------TTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSC-
T ss_pred cc-CCC-CCeEEEEEECCCCEEEEe------------------CCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCc-
Confidence 11 000 124567777778888852 1345776543323444443322 2345788888886
Q ss_pred EEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 221 VVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 221 l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
+|+... .+.+++-+-.+.. ..+......+.....+.++++|++|++...
T Consensus 176 ~~~~g~-~G~~~~S~d~gG~--tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 224 (327)
T 2xbg_A 176 YVAVSS-RGSFYSTWEPGQT--AWEPHNRTTSRRLHNMGFTPDGRLWMIVNG 224 (327)
T ss_dssp EEEEET-TSSEEEEECTTCS--SCEEEECCSSSCEEEEEECTTSCEEEEETT
T ss_pred EEEEEC-CCcEEEEeCCCCC--ceeECCCCCCCccceeEECCCCCEEEEeCC
Confidence 444443 3457765432111 112221112223456778888999987654
No 242
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.29 E-value=0.062 Score=54.11 Aligned_cols=41 Identities=20% Similarity=0.295 Sum_probs=29.1
Q ss_pred eEEEEECC-CCcEEEEEeCCCCCcccceeeEEEECCEEEEEeCC
Q 018144 308 AHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLT 350 (360)
Q Consensus 308 ~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~ 350 (360)
+.|..+|. +|+++..+..+.+.... +. ..+.+|+.|++...
T Consensus 496 g~l~a~D~~tG~~lw~~~~~~~~~~~-p~-ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 496 GRVIAYAADTGEKLWEQPAASGVMAA-PV-TYSVDGEQYVTFMA 537 (689)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSC-CE-EEEETTEEEEEEEE
T ss_pred CcEEEEECCCCccceeeeCCCCcccC-ce-EEEECCEEEEEEEe
Confidence 68999995 69999999887764222 21 22578999988653
No 243
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.28 E-value=0.033 Score=50.53 Aligned_cols=102 Identities=7% Similarity=0.041 Sum_probs=58.2
Q ss_pred ccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE--EeC-CCcCcceEEEecCCCEEEEEeC
Q 018144 150 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL--VAD-GFYFANGVALSRDEDYVVVCES 226 (360)
Q Consensus 150 ~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~--~~~-~l~~pngia~~~dg~~l~v~~t 226 (360)
.+..+++.++|+..++- ...+.+..+|..++..+. ... .....+.++++|+++.|..+.
T Consensus 63 ~v~~~~~sp~g~~l~s~-----------------s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s- 124 (345)
T 3fm0_A 63 TVRKVAWSPCGNYLASA-----------------SFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS- 124 (345)
T ss_dssp CEEEEEECTTSSEEEEE-----------------ETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEE-
T ss_pred cEEEEEECCCCCEEEEE-----------------ECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEE-
Confidence 47788999999876652 224556666655454322 222 234568899999998665555
Q ss_pred CCCEEEEEEecCCcCcc-eeeeccCCCCCCceeEEcCCCCEEEEE
Q 018144 227 WKFRCRKYWLKGERKGK-LETFAENLPGAPDNINLAPDGTFWIAI 270 (360)
Q Consensus 227 ~~~~i~~~~~~g~~~~~-~~~~~~~~~g~pd~i~~d~~G~lwva~ 270 (360)
..+.|..++++...... ...+. ........+++.++|.+.++.
T Consensus 125 ~D~~v~iwd~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~s~ 168 (345)
T 3fm0_A 125 RDKSVWVWEVDEEDEYECVSVLN-SHTQDVKHVVWHPSQELLASA 168 (345)
T ss_dssp TTSCEEEEEECTTSCEEEEEEEC-CCCSCEEEEEECSSSSCEEEE
T ss_pred CCCeEEEEECCCCCCeEEEEEec-CcCCCeEEEEECCCCCEEEEE
Confidence 45678888875432111 12221 122234456777877654443
No 244
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.26 E-value=0.065 Score=56.49 Aligned_cols=131 Identities=11% Similarity=0.075 Sum_probs=75.0
Q ss_pred eEEEcCCC-CEEEEecCCeEE-EEE--CCeee----------EEEe-cCC-eEEEEeCCCcEEEEc-CCC-eEEEeeccC
Q 018144 83 DASMDKNG-VIYTATRDGWIK-RLQ--DGTWV----------NWKF-IDS-HLIICDNANGLHKVS-EDG-VENFLSYVN 144 (360)
Q Consensus 83 ~i~~d~~G-~l~v~~~~G~I~-~~~--~g~~~----------~~~~-~~g-~L~v~~~~~gl~~~~-~~g-~~~l~~~~~ 144 (360)
++++. +| .|++++.++.|+ .++ .++.. .+.. ++| .|+.+.....++.++ .+| ...+.....
T Consensus 342 ~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~ 420 (1045)
T 1k32_A 342 RRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE 420 (1045)
T ss_dssp EECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS
T ss_pred eeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCC
Confidence 44555 54 344444556677 666 33222 1111 234 466666556788888 677 554432221
Q ss_pred CccccccccEEEcCCCcEE-EEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEE
Q 018144 145 GSKLRFANDVVEASDGSLY-FTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVV 223 (360)
Q Consensus 145 ~~~~~~~n~l~~d~dG~l~-vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v 223 (360)
..+..+++++||+.. ++.....+.. .....+.|+.+|.++++...+.........+++++||+.+++
T Consensus 421 ----~~v~~~~~SpDG~~la~~~~~~~~~~--------~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~ 488 (1045)
T 1k32_A 421 ----AMITDFTISDNSRFIAYGFPLKHGET--------DGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYY 488 (1045)
T ss_dssp ----SCCCCEEECTTSCEEEEEEEECSSTT--------CSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEE
T ss_pred ----CCccceEECCCCCeEEEEecCccccc--------cCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEE
Confidence 235788999999743 3221100000 001235799999988886655555556678999999998887
Q ss_pred EeC
Q 018144 224 CES 226 (360)
Q Consensus 224 ~~t 226 (360)
...
T Consensus 489 ~s~ 491 (1045)
T 1k32_A 489 LSY 491 (1045)
T ss_dssp EES
T ss_pred Eec
Confidence 765
No 245
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.26 E-value=0.037 Score=49.58 Aligned_cols=166 Identities=15% Similarity=0.052 Sum_probs=85.7
Q ss_pred CCcceEEEcCCCCEEE-Ee-c---CCeEEEEE--CCeeeE------------EEe-cC----CeEEEEeCCCcEEEEc-C
Q 018144 79 NHPEDASMDKNGVIYT-AT-R---DGWIKRLQ--DGTWVN------------WKF-ID----SHLIICDNANGLHKVS-E 133 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v-~~-~---~G~I~~~~--~g~~~~------------~~~-~~----g~L~v~~~~~gl~~~~-~ 133 (360)
....++++.++|..++ +. . +|.|..++ +++... +.. ++ ..|+.+..++.+..++ .
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 98 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLE 98 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTT
T ss_pred CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCC
Confidence 4567888888774433 33 3 78888777 443221 111 12 3455555555566666 3
Q ss_pred CC---eEEEeeccCCccccccccE------EEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCe--EEEE
Q 018144 134 DG---VENFLSYVNGSKLRFANDV------VEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI--TTLV 202 (360)
Q Consensus 134 ~g---~~~l~~~~~~~~~~~~n~l------~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~--~~~~ 202 (360)
++ ...+. ... ..+..+ ++.++|+..++ +...+.|..+|..+++ ...+
T Consensus 99 ~~~~~~~~~~-~~~----~~v~~~~~~~~~~~s~~~~~l~~-----------------~~~d~~i~vwd~~~~~~~~~~~ 156 (357)
T 3i2n_A 99 APEMPVYSVK-GHK----EIINAIDGIGGLGIGEGAPEIVT-----------------GSRDGTVKVWDPRQKDDPVANM 156 (357)
T ss_dssp SCSSCSEEEC-CCS----SCEEEEEEESGGGCC-CCCEEEE-----------------EETTSCEEEECTTSCSSCSEEE
T ss_pred CCCccEEEEE-ecc----cceEEEeeccccccCCCccEEEE-----------------EeCCCeEEEEeCCCCCCcceec
Confidence 33 22221 111 123334 44677776664 2235678888877654 2222
Q ss_pred eC--C--CcCcceEE----EecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcC---CCCEEEEEe
Q 018144 203 AD--G--FYFANGVA----LSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAP---DGTFWIAII 271 (360)
Q Consensus 203 ~~--~--l~~pngia----~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~---~G~lwva~~ 271 (360)
.. + ......++ ++++++.++.+. ..+.|..+++...+. ... .........+.+++ +|++.++..
T Consensus 157 ~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~---~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~ 231 (357)
T 3i2n_A 157 EPVQGENKRDCWTVAFGNAYNQEERVVCAGY-DNGDIKLFDLRNMAL---RWE-TNIKNGVCSLEFDRKDISMNKLVATS 231 (357)
T ss_dssp CCCTTSCCCCEEEEEEECCCC-CCCEEEEEE-TTSEEEEEETTTTEE---EEE-EECSSCEEEEEESCSSSSCCEEEEEE
T ss_pred cccCCCCCCceEEEEEEeccCCCCCEEEEEc-cCCeEEEEECccCce---eee-cCCCCceEEEEcCCCCCCCCEEEEEC
Confidence 21 1 11334455 678998666555 457899999865332 111 12233456778887 776554433
No 246
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.21 E-value=0.093 Score=53.05 Aligned_cols=138 Identities=15% Similarity=0.061 Sum_probs=71.6
Q ss_pred cEEEEEcCCC---C---eEEEEeC------CCcCcceEEEecCCCEEEEE-eCCC--CEEEEEEecCCc----Cc-ceee
Q 018144 187 GQLLKYDPSS---N---ITTLVAD------GFYFANGVALSRDEDYVVVC-ESWK--FRCRKYWLKGER----KG-KLET 246 (360)
Q Consensus 187 g~l~~~d~~t---g---~~~~~~~------~l~~pngia~~~dg~~l~v~-~t~~--~~i~~~~~~g~~----~~-~~~~ 246 (360)
..|+.+|.++ + +...+.. .......++++|||+.++.. .... ..|+.++.++.+ .. ....
T Consensus 228 ~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l 307 (740)
T 4a5s_A 228 VKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQH 307 (740)
T ss_dssp EEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCE
T ss_pred eEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEe
Confidence 3688899887 6 4444432 22335578899999843333 2222 257888876543 00 1111
Q ss_pred eccCCCCC-----CceeEEcCCCCEEE-EEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEE
Q 018144 247 FAENLPGA-----PDNINLAPDGTFWI-AIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTII 320 (360)
Q Consensus 247 ~~~~~~g~-----pd~i~~d~~G~lwv-a~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~ 320 (360)
+.+...+. +....+.+||..++ .... ......|+.++.+|...
T Consensus 308 ~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~-------------------------------~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 308 IEMSTTGWVGRFRPSEPHFTLDGNSFYKIISN-------------------------------EEGYRHICYFQIDKKDC 356 (740)
T ss_dssp EEECSSSCSSSSSCCCCEECTTSSEEEEEEEC-------------------------------TTSCEEEEEEETTCSSC
T ss_pred eeccCCceEccCcCCCceEcCCCCEEEEEEEc-------------------------------CCCceEEEEEECCCCce
Confidence 11111111 34677889997322 2211 01135788888877655
Q ss_pred EEEeCCCCCcccceeeEE-EECCEEEEEeCC------CCeEEEEeC
Q 018144 321 RNLVDPTGQLMSFVTSGL-QVDNHLYVISLT------SNFIGKVQL 359 (360)
Q Consensus 321 ~~~~~~~g~~~~~~t~~~-~~~g~Lylgs~~------~~~i~~~~l 359 (360)
..+...+. .+..+. .+++.||+.+.. ...|.++++
T Consensus 357 ~~lT~g~~----~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~ 398 (740)
T 4a5s_A 357 TFITKGTW----EVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQL 398 (740)
T ss_dssp EESCCSSS----CEEEEEEECSSEEEEEESCGGGCTTCBEEEEEET
T ss_pred EecccCCE----EEEEEEEEeCCEEEEEEecCCCCCceeEEEEEEC
Confidence 54443221 233332 346777777654 235555544
No 247
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.21 E-value=0.053 Score=49.52 Aligned_cols=138 Identities=12% Similarity=0.079 Sum_probs=77.2
Q ss_pred CCcceEEEcC-CCCE-EEEecCCeEEEEE--CCee------------------------eEEEe-c-CC-eEEEEeCCCc
Q 018144 79 NHPEDASMDK-NGVI-YTATRDGWIKRLQ--DGTW------------------------VNWKF-I-DS-HLIICDNANG 127 (360)
Q Consensus 79 ~~Pe~i~~d~-~G~l-~v~~~~G~I~~~~--~g~~------------------------~~~~~-~-~g-~L~v~~~~~g 127 (360)
..-.++++.+ +|.+ .+++.+|.|..++ +++. ..+.. + ++ .|..++.++.
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~ 123 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKT 123 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSE
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCe
Confidence 4556788888 7765 4555889888888 3311 11111 1 33 3444444444
Q ss_pred EEEEc-CCC-eEEEeeccCCccccccccEEEcC---CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEE
Q 018144 128 LHKVS-EDG-VENFLSYVNGSKLRFANDVVEAS---DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV 202 (360)
Q Consensus 128 l~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~---dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~ 202 (360)
+..++ .++ ...... .. ..+..+.+.+ ++.+.++ +...+.|..+|..+++....
T Consensus 124 i~iwd~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~v~~~d~~~~~~~~~ 181 (408)
T 4a11_B 124 LKVWDTNTLQTADVFN-FE----ETVYSHHMSPVSTKHCLVAV-----------------GTRGPKVQLCDLKSGSCSHI 181 (408)
T ss_dssp EEEEETTTTEEEEEEE-CS----SCEEEEEECSSCSSCCEEEE-----------------EESSSSEEEEESSSSCCCEE
T ss_pred EEEeeCCCCccceecc-CC----CceeeeEeecCCCCCcEEEE-----------------EcCCCeEEEEeCCCcceeee
Confidence 55566 555 222211 11 1234455554 3434443 22356788888876654433
Q ss_pred eC-CCcCcceEEEecCCCEEEEEeCCCCEEEEEEecC
Q 018144 203 AD-GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG 238 (360)
Q Consensus 203 ~~-~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g 238 (360)
.. .......++++++++.++++....+.|..+++..
T Consensus 182 ~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 182 LQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp ECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTC
T ss_pred ecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCC
Confidence 33 3345678999999986555555567788888753
No 248
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.19 E-value=0.14 Score=47.64 Aligned_cols=139 Identities=4% Similarity=0.030 Sum_probs=79.3
Q ss_pred CCccEEEEEcCCCCeEEEEeCC---CcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeE-
Q 018144 184 KPHGQLLKYDPSSNITTLVADG---FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNIN- 259 (360)
Q Consensus 184 ~~~g~l~~~d~~tg~~~~~~~~---l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~- 259 (360)
...+.|..+|..+++....... ....+.++++++++.++.+.. .+.|..+++...+ ....+..........++
T Consensus 189 ~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~ 265 (437)
T 3gre_A 189 TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTT-RGIIDIWDIRFNV--LIRSWSFGDHAPITHVEV 265 (437)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEET-TSCEEEEETTTTE--EEEEEBCTTCEEEEEEEE
T ss_pred eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcC-CCeEEEEEcCCcc--EEEEEecCCCCceEEEEe
Confidence 3467899999887766543332 346788999999986665554 5678888875321 11122101111123342
Q ss_pred ---EcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCC------
Q 018144 260 ---LAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQ------ 329 (360)
Q Consensus 260 ---~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~------ 329 (360)
++++|.+.++... .+.|..+|. +++.+..+....+.
T Consensus 266 ~~~~s~~~~~l~s~~~----------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 311 (437)
T 3gre_A 266 CQFYGKNSVIVVGGSS----------------------------------KTFLTIWNFVKGHCQYAFINSDEQPSMEHF 311 (437)
T ss_dssp CTTTCTTEEEEEEEST----------------------------------TEEEEEEETTTTEEEEEEESSSSCCCGGGG
T ss_pred ccccCCCccEEEEEcC----------------------------------CCcEEEEEcCCCcEEEEEEcCCCCCcccee
Confidence 2345644444333 256666775 46766666532210
Q ss_pred ----------------cccceeeEEEECCEEEEEeCCCCeEEEEeC
Q 018144 330 ----------------LMSFVTSGLQVDNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 330 ----------------~~~~~t~~~~~~g~Lylgs~~~~~i~~~~l 359 (360)
....++.+...++.+.+..-....|..+++
T Consensus 312 ~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~ 357 (437)
T 3gre_A 312 LPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSL 357 (437)
T ss_dssp SCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEET
T ss_pred cccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEEC
Confidence 123366677777776666666778877765
No 249
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.19 E-value=0.11 Score=45.92 Aligned_cols=134 Identities=14% Similarity=0.065 Sum_probs=70.9
Q ss_pred CCcceEEEcCCCC-EEEEecCCeEEEEE--CCe----e-----------eEEEec---CCe-EEEEeCCCcEEEEc-CCC
Q 018144 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGT----W-----------VNWKFI---DSH-LIICDNANGLHKVS-EDG 135 (360)
Q Consensus 79 ~~Pe~i~~d~~G~-l~v~~~~G~I~~~~--~g~----~-----------~~~~~~---~g~-L~v~~~~~gl~~~~-~~g 135 (360)
..-.++++.++|. |.+++.+|.|..++ ++. . ..+... ++. |..+..++-+..++ .++
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~ 91 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPD 91 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTT
T ss_pred cceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCC
Confidence 4566788888876 45555888888877 221 1 112221 243 44444444455555 332
Q ss_pred -e-------EEEeeccCCccccccccEEEcCC--CcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE----
Q 018144 136 -V-------ENFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL---- 201 (360)
Q Consensus 136 -~-------~~l~~~~~~~~~~~~n~l~~d~d--G~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~---- 201 (360)
. +.+... .+. ...+..+++.++ |.+.++ +...|.|..+|..+++...
T Consensus 92 ~~~~~~~~~~~~~~~-~~~-~~~v~~~~~~~~~~~~~l~~-----------------~~~dg~v~iwd~~~~~~~~~~~~ 152 (351)
T 3f3f_A 92 QEECSGRRWNKLCTL-NDS-KGSLYSVKFAPAHLGLKLAC-----------------LGNDGILRLYDALEPSDLRSWTL 152 (351)
T ss_dssp SCTTSSCSEEEEEEE-CCC-SSCEEEEEECCGGGCSEEEE-----------------EETTCEEEEEECSSTTCTTCCEE
T ss_pred cccccccCcceeeee-ccc-CCceeEEEEcCCCCCcEEEE-----------------ecCCCcEEEecCCChHHhccccc
Confidence 1 222111 111 134678888888 876554 2235678888865543210
Q ss_pred ---Ee-------CCCcCcceEEEecC---CCEEEEEeCCCCEEE
Q 018144 202 ---VA-------DGFYFANGVALSRD---EDYVVVCESWKFRCR 232 (360)
Q Consensus 202 ---~~-------~~l~~pngia~~~d---g~~l~v~~t~~~~i~ 232 (360)
.. ........++++|+ ++.++++.. .+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~-~~~~~ 195 (351)
T 3f3f_A 153 TSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSAL-EQAII 195 (351)
T ss_dssp EEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEET-TEEEE
T ss_pred cccccccccccCCcccceeEEEeccCCCCCcEEEEecC-CCcEE
Confidence 00 11234567889887 776665554 34443
No 250
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.18 E-value=0.24 Score=49.73 Aligned_cols=173 Identities=9% Similarity=0.093 Sum_probs=89.0
Q ss_pred eEEEcCCCCE-EEEe-cCC----eEEEEE--CCeeeE------------EEecCCeEEEEeCCCc---------------
Q 018144 83 DASMDKNGVI-YTAT-RDG----WIKRLQ--DGTWVN------------WKFIDSHLIICDNANG--------------- 127 (360)
Q Consensus 83 ~i~~d~~G~l-~v~~-~~G----~I~~~~--~g~~~~------------~~~~~g~L~v~~~~~g--------------- 127 (360)
++++.+||.. .++. .+| .|+.++ +|+... |...+..|+.+.....
T Consensus 129 ~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (710)
T 2xdw_A 129 GYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQ 208 (710)
T ss_dssp EEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCC
T ss_pred EEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCC
Confidence 5677788864 3333 344 688888 554332 1112335666654433
Q ss_pred -EEEEc-CCC-e--EEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCC-----
Q 018144 128 -LHKVS-EDG-V--ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS----- 196 (360)
Q Consensus 128 -l~~~~-~~g-~--~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t----- 196 (360)
++.++ .++ . ..+....... .+..++.+++||+ |.++-... ......|+.+|.++
T Consensus 209 ~v~~~~l~t~~~~~~~v~~~~~~~--~~~~~~~~SpDg~~l~~~~~~~-------------~~~~~~l~~~d~~~~~~~~ 273 (710)
T 2xdw_A 209 KLYYHVLGTDQSEDILCAEFPDEP--KWMGGAELSDDGRYVLLSIREG-------------CDPVNRLWYCDLQQESNGI 273 (710)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCT--TCEEEEEECTTSCEEEEEEECS-------------SSSCCEEEEEEGGGSSSSS
T ss_pred EEEEEECCCCcccceEEeccCCCC--eEEEEEEEcCCCCEEEEEEEcc-------------CCCccEEEEEECccccccc
Confidence 66666 444 2 2222211111 1345778899996 44432110 01135788888765
Q ss_pred -C--eEEEEeCCCcCcceEEEecCCCEEEEEeCC---CCEEEEEEecCCcCcceeeeccCCC-CCCceeEEcCCCCEEEE
Q 018144 197 -N--ITTLVADGFYFANGVALSRDEDYVVVCESW---KFRCRKYWLKGERKGKLETFAENLP-GAPDNINLAPDGTFWIA 269 (360)
Q Consensus 197 -g--~~~~~~~~l~~pngia~~~dg~~l~v~~t~---~~~i~~~~~~g~~~~~~~~~~~~~~-g~pd~i~~d~~G~lwva 269 (360)
+ ..+.+...... ....+++||+.+|+.... ..+|+++++++......+.+..... ....++.+.+++.+++.
T Consensus 274 ~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~ 352 (710)
T 2xdw_A 274 TGILKWVKLIDNFEG-EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLC 352 (710)
T ss_dssp CSSCCCEEEECSSSS-CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEE
T ss_pred CCccceEEeeCCCCc-EEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEE
Confidence 4 35555433222 223578899888887653 3479999986542212233322211 12345566656666665
Q ss_pred Ee
Q 018144 270 II 271 (360)
Q Consensus 270 ~~ 271 (360)
..
T Consensus 353 ~~ 354 (710)
T 2xdw_A 353 YL 354 (710)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 251
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.16 E-value=0.022 Score=57.87 Aligned_cols=172 Identities=15% Similarity=0.129 Sum_probs=91.1
Q ss_pred CcceEEEcCCCC-EEEEecCCeEEEEE--CCee-------------eEEEe-cC--C-eEEEEeCCCcEEEEc-CCC-eE
Q 018144 80 HPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW-------------VNWKF-ID--S-HLIICDNANGLHKVS-EDG-VE 137 (360)
Q Consensus 80 ~Pe~i~~d~~G~-l~v~~~~G~I~~~~--~g~~-------------~~~~~-~~--g-~L~v~~~~~gl~~~~-~~g-~~ 137 (360)
.-.++++.++|. |.+++.+|.|..++ ++.. ..+.. .+ + .|..+..++-+..++ .++ ..
T Consensus 11 ~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~ 90 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS 90 (753)
T ss_dssp CEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEE
T ss_pred eeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccc
Confidence 344566666664 55666888877776 2321 12222 12 3 344555444455566 445 32
Q ss_pred EEeeccCCccccccccEEEcCC--CcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCe---EEEEeCCCcCcceE
Q 018144 138 NFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI---TTLVADGFYFANGV 212 (360)
Q Consensus 138 ~l~~~~~~~~~~~~n~l~~d~d--G~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~---~~~~~~~l~~pngi 212 (360)
..... .+. ...+..+++.++ |.+.++ +...|.|..+|..++. ...+.........+
T Consensus 91 ~~~~~-~~h-~~~V~~v~~sp~~~~~~l~s-----------------gs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l 151 (753)
T 3jro_A 91 QIAVH-AVH-SASVNSVQWAPHEYGPLLLV-----------------ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSA 151 (753)
T ss_dssp EEEEE-CCC-SSCEEEEEECCGGGCSEEEE-----------------EETTSEEEEEECCSSSCCCCEEEECCSSCEEEE
T ss_pred ccccc-cCC-CCCeEEEEECCCCCCCEEEE-----------------EeCCCcEEEEEeecCCCcceeEeecCCCceEEE
Confidence 22211 111 134678888888 876665 3345778888876552 12222233456778
Q ss_pred EEec-------------CCCEEEEEeCCCCEEEEEEecCCcCc-ceeeeccCCCCCCceeEEcCC---CCEEEEEe
Q 018144 213 ALSR-------------DEDYVVVCESWKFRCRKYWLKGERKG-KLETFAENLPGAPDNINLAPD---GTFWIAII 271 (360)
Q Consensus 213 a~~~-------------dg~~l~v~~t~~~~i~~~~~~g~~~~-~~~~~~~~~~g~pd~i~~d~~---G~lwva~~ 271 (360)
+++| |++.++.+. ..+.|..+++...... ..........+....+++.++ |++.++..
T Consensus 152 ~~~p~~~~~~~~~~~~~d~~~l~sgs-~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 152 SWAPATIEEDGEHNGTKESRKFVTGG-ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp EECCCC---------CGGGCCEEEEE-TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred EecCcccccccccccCCCCCEEEEEE-CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe
Confidence 8888 476555555 4567888887643211 111111122334556778887 66555443
No 252
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.15 E-value=0.02 Score=52.81 Aligned_cols=133 Identities=10% Similarity=0.051 Sum_probs=72.3
Q ss_pred eEEEEeCCCcEEEEc-CC---CeEEEeeccCCccccccccEEEcCC-CcEEEEeCCCCCCCccceecccccCCccEEEEE
Q 018144 118 HLIICDNANGLHKVS-ED---GVENFLSYVNGSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKY 192 (360)
Q Consensus 118 ~L~v~~~~~gl~~~~-~~---g~~~l~~~~~~~~~~~~n~l~~d~d-G~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~ 192 (360)
.|..+..++.+..++ .+ +.+.+.. ..+. ...+..+++.++ +++.++- ...+.|..+
T Consensus 81 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~-~~~h-~~~v~~~~~~~~~~~~l~s~-----------------~~dg~v~iw 141 (416)
T 2pm9_A 81 IIAGALDNGSLELYSTNEANNAINSMAR-FSNH-SSSVKTVKFNAKQDNVLASG-----------------GNNGEIFIW 141 (416)
T ss_dssp CEEEEESSSCEEEECCSSTTSCCCEEEE-CCCS-SSCCCEEEECSSSTTBEEEE-----------------CSSSCEEBC
T ss_pred eEEEEccCCeEEEeecccccccccchhh-ccCC-ccceEEEEEcCCCCCEEEEE-----------------cCCCeEEEE
Confidence 455555555566666 43 2111111 1111 135788999987 6766652 235678888
Q ss_pred cCCCCe------EEEEe----CCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCC-----CCCCce
Q 018144 193 DPSSNI------TTLVA----DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENL-----PGAPDN 257 (360)
Q Consensus 193 d~~tg~------~~~~~----~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~-----~g~pd~ 257 (360)
|..+++ ..... ........+++++++..++++....+.|..++++..+ ....+.... ......
T Consensus 142 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~ 219 (416)
T 2pm9_A 142 DMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKK--EVIHLSYTSPNSGIKQQLSV 219 (416)
T ss_dssp BTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTE--EEEEECCCCCSSCCCCCEEE
T ss_pred ECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC--cceEEeccccccccCCceEE
Confidence 877664 21111 1223567899999943355565556779989876432 111221111 234566
Q ss_pred eEEcCCC-CEEEEEe
Q 018144 258 INLAPDG-TFWIAII 271 (360)
Q Consensus 258 i~~d~~G-~lwva~~ 271 (360)
+++.++| ++.++..
T Consensus 220 ~~~~~~~~~~l~~~~ 234 (416)
T 2pm9_A 220 VEWHPKNSTRVATAT 234 (416)
T ss_dssp EEECSSCTTEEEEEE
T ss_pred EEECCCCCCEEEEEE
Confidence 8888887 4444433
No 253
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.12 E-value=0.14 Score=45.78 Aligned_cols=166 Identities=11% Similarity=0.108 Sum_probs=90.4
Q ss_pred CcceEEEcCCCCEE-EEecCCeEEEEE--CCeee-EEE----------e-cCCe-EEEEeCCCcEEEEc-CCC-eEEEee
Q 018144 80 HPEDASMDKNGVIY-TATRDGWIKRLQ--DGTWV-NWK----------F-IDSH-LIICDNANGLHKVS-EDG-VENFLS 141 (360)
Q Consensus 80 ~Pe~i~~d~~G~l~-v~~~~G~I~~~~--~g~~~-~~~----------~-~~g~-L~v~~~~~gl~~~~-~~g-~~~l~~ 141 (360)
.-.++++.++|... .++.+|.|..++ +++.. .+. . +++. |..+..++-+..++ +.. ...+..
T Consensus 67 ~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~ 146 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLG 146 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECC
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Confidence 44567888887654 555889888888 55422 121 1 2333 33444344444555 333 333311
Q ss_pred ccCCccccccccEEEcC------CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-CcCcceEEE
Q 018144 142 YVNGSKLRFANDVVEAS------DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVAL 214 (360)
Q Consensus 142 ~~~~~~~~~~n~l~~d~------dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-l~~pngia~ 214 (360)
. . ..+..+.+.+ ++...++ +...+.|..+|..+++......+ ....+.+++
T Consensus 147 h-~----~~v~~~~~~~~~~~~~~~~~l~s-----------------~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~ 204 (319)
T 3frx_A 147 H-N----DWVSQVRVVPNEKADDDSVTIIS-----------------AGNDKMVKAWNLNQFQIEADFIGHNSNINTLTA 204 (319)
T ss_dssp C-S----SCEEEEEECCC------CCEEEE-----------------EETTSCEEEEETTTTEEEEEECCCCSCEEEEEE
T ss_pred c-C----CcEEEEEEccCCCCCCCccEEEE-----------------EeCCCEEEEEECCcchhheeecCCCCcEEEEEE
Confidence 1 1 1234455544 3334443 23356788888877765543333 345678999
Q ss_pred ecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 215 SRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 215 ~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
+|||+.+..+. ..+.|..+++...+ ....+. .......+++.++|.+.++...
T Consensus 205 sp~g~~l~s~~-~dg~i~iwd~~~~~--~~~~~~--~~~~v~~~~~sp~~~~la~~~~ 257 (319)
T 3frx_A 205 SPDGTLIASAG-KDGEIMLWNLAAKK--AMYTLS--AQDEVFSLAFSPNRYWLAAATA 257 (319)
T ss_dssp CTTSSEEEEEE-TTCEEEEEETTTTE--EEEEEE--CCSCEEEEEECSSSSEEEEEET
T ss_pred cCCCCEEEEEe-CCCeEEEEECCCCc--EEEEec--CCCcEEEEEEcCCCCEEEEEcC
Confidence 99998555444 45778888875432 111221 1223566888999876655443
No 254
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.09 E-value=0.071 Score=53.65 Aligned_cols=100 Identities=13% Similarity=0.206 Sum_probs=61.0
Q ss_pred CCCEEEEecCCeEEEEE--CCeee--E--------------------EEecCCeEEEEeCCCcEEEEc-CCC-eEEEeec
Q 018144 89 NGVIYTATRDGWIKRLQ--DGTWV--N--------------------WKFIDSHLIICDNANGLHKVS-EDG-VENFLSY 142 (360)
Q Consensus 89 ~G~l~v~~~~G~I~~~~--~g~~~--~--------------------~~~~~g~L~v~~~~~gl~~~~-~~g-~~~l~~~ 142 (360)
+|.||+++.++.|+.+| +|+.. . ....+++||+++.+..++.+| .+| ...-...
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~ 149 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDT 149 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeecC
Confidence 78999999889999999 67421 0 112367899998777899999 788 3322221
Q ss_pred c-CCcc-ccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE
Q 018144 143 V-NGSK-LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL 201 (360)
Q Consensus 143 ~-~~~~-~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~ 201 (360)
. +... ......-.+ .+|.+|+..+...+ ...|.|+.+|.+||+...
T Consensus 150 ~~~~~~~~~~~~sP~v-~~g~v~vg~~~~~~------------~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 150 RADHKRSYTITGAPRV-VNGKVVIGNGGAEF------------GVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp CSCTTSCCBCCSCCEE-ETTEEEECCBCTTT------------CCBCEEEEEETTTCCEEE
T ss_pred cCCCCCCccccCCcEE-ECCEEEEEeCCCcc------------CCCCEEEEEECCCCcEEE
Confidence 1 1100 000111122 26789886433111 135789999999998754
No 255
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.07 E-value=0.2 Score=46.81 Aligned_cols=131 Identities=14% Similarity=0.069 Sum_probs=69.5
Q ss_pred CccEEEEEcCCCCeEEEEeCC-CcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCC
Q 018144 185 PHGQLLKYDPSSNITTLVADG-FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPD 263 (360)
Q Consensus 185 ~~g~l~~~d~~tg~~~~~~~~-l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~ 263 (360)
..|.|..+|..+++......+ ......+++ +++.++.+.. .+.|..+++...+ ....+. ........+.. +
T Consensus 257 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-d~~i~i~d~~~~~--~~~~~~-~~~~~v~~~~~--~ 328 (445)
T 2ovr_B 257 YDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL-DTSIRVWDVETGN--CIHTLT-GHQSLTSGMEL--K 328 (445)
T ss_dssp TTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEET-TSCEEEEETTTCC--EEEEEC-CCCSCEEEEEE--E
T ss_pred CCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeC-CCeEEEEECCCCC--EEEEEc-CCcccEEEEEE--e
Confidence 356788888776665443332 223345555 7776666654 5678888875422 112221 12222333444 3
Q ss_pred CCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccceeeEEEECC
Q 018144 264 GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDN 342 (360)
Q Consensus 264 G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g 342 (360)
|++.++... .+.|..+|. +++.+..+..+.+. ...++++..++.
T Consensus 329 ~~~l~~~~~----------------------------------dg~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~ 373 (445)
T 2ovr_B 329 DNILVSGNA----------------------------------DSTVKIWDIKTGQCLQTLQGPNKH-QSAVTCLQFNKN 373 (445)
T ss_dssp TTEEEEEET----------------------------------TSCEEEEETTTCCEEEEECSTTSC-SSCEEEEEECSS
T ss_pred CCEEEEEeC----------------------------------CCeEEEEECCCCcEEEEEccCCCC-CCCEEEEEECCC
Confidence 444444333 246666774 67777777654322 235666666656
Q ss_pred EEEEEeCCCCeEEEEeC
Q 018144 343 HLYVISLTSNFIGKVQL 359 (360)
Q Consensus 343 ~Lylgs~~~~~i~~~~l 359 (360)
.|..|+. ...|..+++
T Consensus 374 ~l~s~~~-dg~v~iwd~ 389 (445)
T 2ovr_B 374 FVITSSD-DGTVKLWDL 389 (445)
T ss_dssp EEEEEET-TSEEEEEET
T ss_pred EEEEEeC-CCeEEEEEC
Confidence 6665553 455665554
No 256
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.07 E-value=0.035 Score=55.67 Aligned_cols=99 Identities=14% Similarity=0.233 Sum_probs=61.1
Q ss_pred CCCEEEEecCCeEEEEE--CCeeeEEE-----------------------ecCCeEEEEeCCCcEEEEc-CCC-eEEEee
Q 018144 89 NGVIYTATRDGWIKRLQ--DGTWVNWK-----------------------FIDSHLIICDNANGLHKVS-EDG-VENFLS 141 (360)
Q Consensus 89 ~G~l~v~~~~G~I~~~~--~g~~~~~~-----------------------~~~g~L~v~~~~~gl~~~~-~~g-~~~l~~ 141 (360)
+|.||+++.+|.|+.+| +|+.. |. ..++++|+++.+..++.+| .+| ...-..
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~-W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 144 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKEL-WRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQ 144 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEE-EEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhc-eEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeec
Confidence 78999999999999999 67532 21 1357899998777899999 788 332222
Q ss_pred ccCC-ccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE
Q 018144 142 YVNG-SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL 201 (360)
Q Consensus 142 ~~~~-~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~ 201 (360)
.... ..........+ .+|.+|+......+ ...|.|+.+|.+||+...
T Consensus 145 ~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~------------~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 145 TTDPAKPYSITGAPRV-VKGKVIIGNGGAEY------------GVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp CSCTTSSCBCCSCCEE-ETTEEEECCBCTTT------------CCBCEEEEEETTTCCEEE
T ss_pred cCCCCCcceecCCCEE-ECCEEEEeCCCCCc------------CCCCEEEEEECCCCcEEE
Confidence 1111 00011111123 26789986433111 124789999999898754
No 257
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.06 E-value=0.044 Score=50.00 Aligned_cols=83 Identities=17% Similarity=0.174 Sum_probs=50.8
Q ss_pred CccEEEEEcCCCCeEEEEeCCCcCcceEEEec-CCCEEEEEeCCC-----CEEEEEEecCCcCcceeeeccCCCC-CCce
Q 018144 185 PHGQLLKYDPSSNITTLVADGFYFANGVALSR-DEDYVVVCESWK-----FRCRKYWLKGERKGKLETFAENLPG-APDN 257 (360)
Q Consensus 185 ~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~-dg~~l~v~~t~~-----~~i~~~~~~g~~~~~~~~~~~~~~g-~pd~ 257 (360)
....|+.+|.++++...+.........++++| |++.++++.... .+|+.++.++... ..+....++ .+..
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~---~~l~~~~~~~~~~~ 242 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV---RKIKEHAEGESCTH 242 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC---EESSCCCTTEEEEE
T ss_pred CcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce---eEeeccCCCccccc
Confidence 34679999998888776654444567889999 777555544322 4789998865321 222211111 2344
Q ss_pred eEEcCCCC-EEEEE
Q 018144 258 INLAPDGT-FWIAI 270 (360)
Q Consensus 258 i~~d~~G~-lwva~ 270 (360)
+.++++|+ |+++.
T Consensus 243 ~~~spdg~~l~~~~ 256 (396)
T 3c5m_A 243 EFWIPDGSAMAYVS 256 (396)
T ss_dssp EEECTTSSCEEEEE
T ss_pred eEECCCCCEEEEEe
Confidence 67889986 55443
No 258
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.27 Score=48.06 Aligned_cols=99 Identities=7% Similarity=-0.039 Sum_probs=58.6
Q ss_pred ccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCe--------EEEEeCC----CcCcceEEEecC
Q 018144 150 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI--------TTLVADG----FYFANGVALSRD 217 (360)
Q Consensus 150 ~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~--------~~~~~~~----l~~pngia~~~d 217 (360)
.+..+++.+||.+.++ +...|.|..+|..++. +..+... ......++++||
T Consensus 131 sv~svafSPDG~~LAs-----------------gs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd 193 (588)
T 2j04_A 131 TYHCFEWNPIESSIVV-----------------GNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED 193 (588)
T ss_dssp CEEEEEECSSSSCEEE-----------------EETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT
T ss_pred cEEEEEEcCCCCEEEE-----------------EcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCC
Confidence 4778999999975553 3346788889988764 2333211 235678999999
Q ss_pred CCEEEEEeCCCCEEEEEEecCCcCcc-eeeeccCCCCCCceeEEcCCCCEEEEE
Q 018144 218 EDYVVVCESWKFRCRKYWLKGERKGK-LETFAENLPGAPDNINLAPDGTFWIAI 270 (360)
Q Consensus 218 g~~l~v~~t~~~~i~~~~~~g~~~~~-~~~~~~~~~g~pd~i~~d~~G~lwva~ 270 (360)
| + ++....+.+..+++++....+ ...+..........+++. |+..++.
T Consensus 194 g--L-aass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa 242 (588)
T 2j04_A 194 V--L-VAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLT 242 (588)
T ss_dssp E--E-EEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEE
T ss_pred c--E-EEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEE
Confidence 8 4 344446778888887654321 112211111235667776 4544444
No 259
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.02 E-value=0.14 Score=51.36 Aligned_cols=101 Identities=11% Similarity=-0.036 Sum_probs=60.1
Q ss_pred cccEEEcCCCc-EEEE-eCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCCC
Q 018144 151 ANDVVEASDGS-LYFT-VSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK 228 (360)
Q Consensus 151 ~n~l~~d~dG~-l~vt-d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~~ 228 (360)
..++.+++||+ |.++ +.+ +.....|+.+|.++|+.......-....+++++|||+.++++....
T Consensus 127 ~~~~~~SPDg~~la~~~~~~--------------G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~ 192 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSAS--------------GSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQ 192 (710)
T ss_dssp EEEEEECTTSSEEEEEEEET--------------TCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCC
T ss_pred EEEEEECCCCCEEEEEEcCC--------------CCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECC
Confidence 45678899996 4333 211 1122378999998888754322112246799999999888876432
Q ss_pred ---------------CEEEEEEecCCcCcceeeeccC-CCCCCceeEEcCCCC
Q 018144 229 ---------------FRCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGT 265 (360)
Q Consensus 229 ---------------~~i~~~~~~g~~~~~~~~~~~~-~~g~pd~i~~d~~G~ 265 (360)
..|+++++.+.......++... .+....++.+++||+
T Consensus 193 ~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~ 245 (710)
T 2xdw_A 193 QDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGR 245 (710)
T ss_dssp CSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC
T ss_pred ccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCC
Confidence 3488888764332222333221 122334678899997
No 260
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.01 E-value=0.22 Score=46.46 Aligned_cols=136 Identities=15% Similarity=0.099 Sum_probs=71.3
Q ss_pred CCccEEEEEcCCCCeEEEEeCC-CcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeecc--CCCCCCceeEE
Q 018144 184 KPHGQLLKYDPSSNITTLVADG-FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAE--NLPGAPDNINL 260 (360)
Q Consensus 184 ~~~g~l~~~d~~tg~~~~~~~~-l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~--~~~g~pd~i~~ 260 (360)
...+.|..+|..+++......+ ......+ ..+++.++.+. ..+.|..+++...+ ....+.. ...+....+.+
T Consensus 296 ~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~-~dg~i~vwd~~~~~--~~~~~~~~~~~~~~v~~~~~ 370 (445)
T 2ovr_B 296 SLDTSIRVWDVETGNCIHTLTGHQSLTSGM--ELKDNILVSGN-ADSTVKIWDIKTGQ--CLQTLQGPNKHQSAVTCLQF 370 (445)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCCSCEEEE--EEETTEEEEEE-TTSCEEEEETTTCC--EEEEECSTTSCSSCEEEEEE
T ss_pred eCCCeEEEEECCCCCEEEEEcCCcccEEEE--EEeCCEEEEEe-CCCeEEEEECCCCc--EEEEEccCCCCCCCEEEEEE
Confidence 3456788888877765443332 1223334 44566555554 45678888875321 1222211 01222334555
Q ss_pred cCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCC-CCCcccceeeEE
Q 018144 261 APDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDP-TGQLMSFVTSGL 338 (360)
Q Consensus 261 d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~-~g~~~~~~t~~~ 338 (360)
+ +++.++... .+.|..++. +|+.+..+... .+.....+.++.
T Consensus 371 ~--~~~l~s~~~----------------------------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 414 (445)
T 2ovr_B 371 N--KNFVITSSD----------------------------------DGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIR 414 (445)
T ss_dssp C--SSEEEEEET----------------------------------TSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEE
T ss_pred C--CCEEEEEeC----------------------------------CCeEEEEECCCCceeeeeeccccCCCCceEEEEE
Confidence 4 555444433 257777774 67877777322 122234567777
Q ss_pred EEC-CE-EEEEeCCCC---eEEEEeCC
Q 018144 339 QVD-NH-LYVISLTSN---FIGKVQLS 360 (360)
Q Consensus 339 ~~~-g~-Lylgs~~~~---~i~~~~l~ 360 (360)
... +. |..|+..+. +|.+++++
T Consensus 415 ~s~~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 415 ASNTKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp ECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred ecCCEEEEEEcccCCCCccEEEEEECC
Confidence 765 33 344444443 57777753
No 261
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.00 E-value=0.14 Score=45.88 Aligned_cols=82 Identities=10% Similarity=0.047 Sum_probs=43.5
Q ss_pred CCcceEEEcCC---C-CEEEEecCCeEEEEE--C-Ceee--EE----------Ee-cCC-eEEEEeCCCcEEEEc-CCC-
Q 018144 79 NHPEDASMDKN---G-VIYTATRDGWIKRLQ--D-GTWV--NW----------KF-IDS-HLIICDNANGLHKVS-EDG- 135 (360)
Q Consensus 79 ~~Pe~i~~d~~---G-~l~v~~~~G~I~~~~--~-g~~~--~~----------~~-~~g-~L~v~~~~~gl~~~~-~~g- 135 (360)
..-.++++.++ | .|.+++.+|.|..++ + +... .+ .. +++ .|+.++.++.+..++ .++
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 119 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQ 119 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCC
Confidence 45577888887 3 456666889888887 3 4321 11 11 234 355555555566666 555
Q ss_pred eEEEeeccCCccccccccEEE--cCCCcEEEE
Q 018144 136 VENFLSYVNGSKLRFANDVVE--ASDGSLYFT 165 (360)
Q Consensus 136 ~~~l~~~~~~~~~~~~n~l~~--d~dG~l~vt 165 (360)
...+.. .. ..+..+.+ +++|.+.++
T Consensus 120 ~~~~~~-~~----~~v~~~~~~~~~~~~~l~~ 146 (368)
T 3mmy_A 120 AIQIAQ-HD----APVKTIHWIKAPNYSCVMT 146 (368)
T ss_dssp EEEEEE-CS----SCEEEEEEEECSSCEEEEE
T ss_pred ceeecc-cc----CceEEEEEEeCCCCCEEEE
Confidence 333221 11 23455565 566654443
No 262
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.99 E-value=0.17 Score=44.78 Aligned_cols=170 Identities=10% Similarity=0.057 Sum_probs=90.8
Q ss_pred CCcceEEEcCCCCEE-EEecCCeEEEEE--CCeeeEE------------Eec-CCeEEEEeCCCcEEEEc-CCCeEEEee
Q 018144 79 NHPEDASMDKNGVIY-TATRDGWIKRLQ--DGTWVNW------------KFI-DSHLIICDNANGLHKVS-EDGVENFLS 141 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~-v~~~~G~I~~~~--~g~~~~~------------~~~-~g~L~v~~~~~gl~~~~-~~g~~~l~~ 141 (360)
....++++.++|.+. .++.+|.|..++ .+..... ... +..|..+..++.+..++ .........
T Consensus 87 ~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~ 166 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQ 166 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred CCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEE
Confidence 455678888888654 555888888777 3321111 111 23344454444455555 222211111
Q ss_pred ccCCccccccccEEEcCCC--cEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-CcCcceEEEecCC
Q 018144 142 YVNGSKLRFANDVVEASDG--SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVALSRDE 218 (360)
Q Consensus 142 ~~~~~~~~~~n~l~~d~dG--~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-l~~pngia~~~dg 218 (360)
..+. ...+..+++..++ .+.++- ...+.|..+|..+++......+ ....+.++++||+
T Consensus 167 -~~~~-~~~v~~~~~~~~~~~~~~~s~-----------------~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~ 227 (340)
T 4aow_A 167 -DESH-SEWVSCVRFSPNSSNPIIVSC-----------------GWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDG 227 (340)
T ss_dssp -SSSC-SSCEEEEEECSCSSSCEEEEE-----------------ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS
T ss_pred -eccc-cCcccceEEccCCCCcEEEEE-----------------cCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCC
Confidence 1111 1234455555443 345542 2345677888877776554433 3345789999999
Q ss_pred CEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 219 DYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 219 ~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
+.++.+. ..+.|..+++...+ ....+. .......+.+.+++.+..+...
T Consensus 228 ~~l~s~s-~Dg~i~iwd~~~~~--~~~~~~--~~~~v~~~~~~~~~~~~~~~~d 276 (340)
T 4aow_A 228 SLCASGG-KDGQAMLWDLNEGK--HLYTLD--GGDIINALCFSPNRYWLCAATG 276 (340)
T ss_dssp SEEEEEE-TTCEEEEEETTTTE--EEEEEE--CSSCEEEEEECSSSSEEEEEET
T ss_pred CEEEEEe-CCCeEEEEEeccCc--eeeeec--CCceEEeeecCCCCceeeccCC
Confidence 8665554 45788888875421 112221 1223455667777777766554
No 263
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.98 E-value=0.19 Score=45.20 Aligned_cols=131 Identities=19% Similarity=0.061 Sum_probs=75.4
Q ss_pred CCeEEE-EeCCCcEEEEc-CCC-eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEE
Q 018144 116 DSHLII-CDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKY 192 (360)
Q Consensus 116 ~g~L~v-~~~~~gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~ 192 (360)
++.+++ ++.++.+..++ .++ ......... ...+..+++.++|.+.++ +...|.|..+
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~---~~~i~~~~~~pdg~~las-----------------g~~dg~i~iw 197 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQYIVHSAKS---DVEYSSGVLHKDSLLLAL-----------------YSPDGILDVY 197 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCEEEEECCCS---SCCCCEEEECTTSCEEEE-----------------ECTTSCEEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEecCC---CCceEEEEECCCCCEEEE-----------------EcCCCEEEEE
Confidence 344444 55445566666 555 322211111 124778999999988775 3346788889
Q ss_pred cCCCCeEE--EEeC-CCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcC-cceeeeccCCCCCCc---eeEEcCCCC
Q 018144 193 DPSSNITT--LVAD-GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERK-GKLETFAENLPGAPD---NINLAPDGT 265 (360)
Q Consensus 193 d~~tg~~~--~~~~-~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~-~~~~~~~~~~~g~pd---~i~~d~~G~ 265 (360)
|..+++.. .+.. .....+.+++++++..|..+. . +.|..+|+...+. ...+.+.. ...+- .++++++|.
T Consensus 198 d~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~-~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~ 273 (343)
T 3lrv_A 198 NLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-D-QTVVCFDLRKDVGTLAYPTYTI--PEFKTGTVTYDIDDSGK 273 (343)
T ss_dssp ESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-S-SBEEEEETTSSTTCBSSCCCBC-------CCEEEEECTTSS
T ss_pred ECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-C-CeEEEEEcCCCCcceeeccccc--ccccccceEEEECCCCC
Confidence 98777643 2322 234567899999998776666 3 3788888764321 11111110 11222 388999998
Q ss_pred EEEEE
Q 018144 266 FWIAI 270 (360)
Q Consensus 266 lwva~ 270 (360)
+.++.
T Consensus 274 ~l~~~ 278 (343)
T 3lrv_A 274 NMIAY 278 (343)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66653
No 264
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.98 E-value=0.021 Score=60.36 Aligned_cols=165 Identities=10% Similarity=0.056 Sum_probs=97.6
Q ss_pred CcceEEEc-CCCC-EEEEecCCeEEEEE--CCeeeEE-----------EecCC-eEEEEeCCCcEE-EEc-CCC-eEEEe
Q 018144 80 HPEDASMD-KNGV-IYTATRDGWIKRLQ--DGTWVNW-----------KFIDS-HLIICDNANGLH-KVS-EDG-VENFL 140 (360)
Q Consensus 80 ~Pe~i~~d-~~G~-l~v~~~~G~I~~~~--~g~~~~~-----------~~~~g-~L~v~~~~~gl~-~~~-~~g-~~~l~ 140 (360)
...++++. ++|. |.++. ++.|+.++ +++...+ ...+| .|+.+.....++ .++ .++ .+.+.
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~~~l~ 375 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFE 375 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECC
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCCceEec
Confidence 36788898 8886 44444 67788777 3432221 11122 355544445677 667 445 44432
Q ss_pred eccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-CcCcceEEEecCCC
Q 018144 141 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVALSRDED 219 (360)
Q Consensus 141 ~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-l~~pngia~~~dg~ 219 (360)
. . ...+..+++++||+..++- ...+.|+.+|.++++...+..+ ......++++|||+
T Consensus 376 -~-~---~~~~~~~~~SpDG~~la~~-----------------~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~ 433 (1045)
T 1k32_A 376 -E-N---LGNVFAMGVDRNGKFAVVA-----------------NDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSR 433 (1045)
T ss_dssp -C-C---CCSEEEEEECTTSSEEEEE-----------------ETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSC
T ss_pred -C-C---ccceeeeEECCCCCEEEEE-----------------CCCCeEEEEECCCCceEEeccCCCCCccceEECCCCC
Confidence 1 1 1346788999999744421 1235799999988888766533 33447899999999
Q ss_pred EEEEEeCCC---------CEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC-EEEEEe
Q 018144 220 YVVVCESWK---------FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAII 271 (360)
Q Consensus 220 ~l~v~~t~~---------~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~ 271 (360)
.+.++.... ..|+.+++++.+ ...+.. .......+.++++|. |+++..
T Consensus 434 ~la~~~~~~~~~~~~~~~~~i~l~d~~~g~---~~~l~~-~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 434 FIAYGFPLKHGETDGYVMQAIHVYDMEGRK---IFAATT-ENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEEEEEEECSSTTCSCCEEEEEEEETTTTE---EEECSC-SSSBEEEEEECTTSCEEEEEES
T ss_pred eEEEEecCccccccCCCCCeEEEEECCCCc---EEEeeC-CCcccCCceEcCCCCEEEEEec
Confidence 776665422 478888876532 222221 111234577888886 555543
No 265
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.97 E-value=0.25 Score=46.27 Aligned_cols=54 Identities=9% Similarity=0.075 Sum_probs=37.6
Q ss_pred CCccEEEEEcCCCCeEEEEeCC-CcCcceEEEecCCCEEEEEeCCCCEEEEEEecC
Q 018144 184 KPHGQLLKYDPSSNITTLVADG-FYFANGVALSRDEDYVVVCESWKFRCRKYWLKG 238 (360)
Q Consensus 184 ~~~g~l~~~d~~tg~~~~~~~~-l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g 238 (360)
...+.|..+|..+++......+ ......++++++++.++.+.. .+.|..+++..
T Consensus 287 ~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~-dg~i~vwd~~~ 341 (464)
T 3v7d_B 287 SYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM-DTTIRIWDLEN 341 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEET-TSCEEEEETTT
T ss_pred eCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeC-CCcEEEEECCC
Confidence 3457788899877766544332 345678999999986666554 56788888753
No 266
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.97 E-value=0.2 Score=45.19 Aligned_cols=212 Identities=8% Similarity=0.045 Sum_probs=109.2
Q ss_pred ceEEEcCCCCEEEEecCCeEEEEE-CCe-ee-------------EEE-ecCCeEEEEeCCCcEEEEcCCC--eEEEeecc
Q 018144 82 EDASMDKNGVIYTATRDGWIKRLQ-DGT-WV-------------NWK-FIDSHLIICDNANGLHKVSEDG--VENFLSYV 143 (360)
Q Consensus 82 e~i~~d~~G~l~v~~~~G~I~~~~-~g~-~~-------------~~~-~~~g~L~v~~~~~gl~~~~~~g--~~~l~~~~ 143 (360)
.+|++++ +.+|+....|.|++-. .|+ ++ .+. ..++++|++....++++-...| .+.+....
T Consensus 83 ~~i~~~~-~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~~ 161 (327)
T 2xbg_A 83 NSVSFQG-NEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEA 161 (327)
T ss_dssp EEEEEET-TEEEEEEETTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEEECSC
T ss_pred EEEEecC-CeEEEEECCCeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEeecCC
Confidence 3567764 6788877778888865 331 11 111 2457788776544555544444 44443221
Q ss_pred CCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCC-CCeEEEEeCC-CcCcceEEEecCCCEE
Q 018144 144 NGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SNITTLVADG-FYFANGVALSRDEDYV 221 (360)
Q Consensus 144 ~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-tg~~~~~~~~-l~~pngia~~~dg~~l 221 (360)
. ..+.+++++++|.+|+.. ..|.+++-+.. ....+.+... -.....++++++++ +
T Consensus 162 ~----~~~~~~~~~~~~~~~~~g------------------~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~-~ 218 (327)
T 2xbg_A 162 I----GVMRNLNRSPSGEYVAVS------------------SRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR-L 218 (327)
T ss_dssp C----CCEEEEEECTTSCEEEEE------------------TTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSC-E
T ss_pred C----cceEEEEEcCCCcEEEEE------------------CCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCC-E
Confidence 1 235677888888888742 13456665432 1233333221 22345777888887 5
Q ss_pred EEEeCCCCEEEEEEecCCcCcceeeeccC-CCC--CCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccc
Q 018144 222 VVCESWKFRCRKYWLKGERKGKLETFAEN-LPG--APDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLF 298 (360)
Q Consensus 222 ~v~~t~~~~i~~~~~~g~~~~~~~~~~~~-~~g--~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 298 (360)
|++.. .+.+++...++.+ +.+..... ++. ....+..++++.+|++...
T Consensus 219 ~~~~~-~G~~~~s~~D~G~--tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~-------------------------- 269 (327)
T 2xbg_A 219 WMIVN-GGKIAFSDPDNSE--NWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA-------------------------- 269 (327)
T ss_dssp EEEET-TTEEEEEETTEEE--EECCCBCTTSSCCSCEEEEEESSSSCEEEEEST--------------------------
T ss_pred EEEeC-CceEEEecCCCCC--eeEeccCCcccCCcceEEEEecCCCEEEEEeCC--------------------------
Confidence 55554 3456554333211 11111100 111 1124556778899997654
Q ss_pred cccccCCCceEEEEECCCCcEEEEEeCCCCCcccceeeEEE-ECCEEEEEeCCCCeEEEE
Q 018144 299 SQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQ-VDNHLYVISLTSNFIGKV 357 (360)
Q Consensus 299 ~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~-~~g~Lylgs~~~~~i~~~ 357 (360)
+.+++-...|+.-..+..+.+. ...+..+.. .++.+|+.+..+ .|.++
T Consensus 270 ---------g~i~~S~DgG~tW~~~~~~~~~-~~~~~~v~~~~~~~~~~~G~~G-~i~~~ 318 (327)
T 2xbg_A 270 ---------GALLCSQDGGQTWQQDVDVKKV-PSNFYKILFFSPDQGFILGQKG-ILLRY 318 (327)
T ss_dssp ---------TCEEEESSTTSSCEECGGGTTS-SSCCCEEEEEETTEEEEECSTT-EEEEE
T ss_pred ---------CeEEEeCCCCcccEEcCccCCC-CCCeEEEEEECCCceEEEcCCc-eEEEE
Confidence 3465544456654444322111 112344444 468888887654 55554
No 267
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=96.95 E-value=0.12 Score=51.75 Aligned_cols=186 Identities=11% Similarity=0.010 Sum_probs=93.1
Q ss_pred CcceEEEcCCCC-EEEEecC---------CeEEEEE--CCeeeEEE--------------ecCC-eEEEEeCCCcEEEEc
Q 018144 80 HPEDASMDKNGV-IYTATRD---------GWIKRLQ--DGTWVNWK--------------FIDS-HLIICDNANGLHKVS 132 (360)
Q Consensus 80 ~Pe~i~~d~~G~-l~v~~~~---------G~I~~~~--~g~~~~~~--------------~~~g-~L~v~~~~~gl~~~~ 132 (360)
...++++.+||. |.++..+ +.|+.++ +|+...+. .++| .|..+. .+.++.++
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~ 140 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCA 140 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEES
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEE-CCeEEEEE
Confidence 377899999997 4444432 6777887 45432221 1234 344433 35688888
Q ss_pred -CCC-eEEEeec-cCCc-------------cccccccEEEcCCCc-EEEEeCCCCCCCccceec------------c-c-
Q 018144 133 -EDG-VENFLSY-VNGS-------------KLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLD------------I-L- 181 (360)
Q Consensus 133 -~~g-~~~l~~~-~~~~-------------~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~------------~-~- 181 (360)
.+| ...+... ..+. .+.....+++++||+ |.++.... -....+... + +
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND-SRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC-TTSCEEEECCCSSSSSCCCEEEECC
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC-CccceEEeeccCCcCCCcceeccCC
Confidence 556 4444322 1110 011235789999996 54442110 000000000 0 0
Q ss_pred -cc--CCccEEEEEcCCCCeE-EEEeCC------CcCcceEEEecCCCEEEEEe-CC--CCEEEEEEecCCcCcceeeec
Q 018144 182 -EG--KPHGQLLKYDPSSNIT-TLVADG------FYFANGVALSRDEDYVVVCE-SW--KFRCRKYWLKGERKGKLETFA 248 (360)
Q Consensus 182 -~~--~~~g~l~~~d~~tg~~-~~~~~~------l~~pngia~~~dg~~l~v~~-t~--~~~i~~~~~~g~~~~~~~~~~ 248 (360)
.+ .....|+.+|..+++. ..+... ......++++|||+.++... .. ...|+.+++++.+.. ..+.
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~--~~~~ 297 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCT--KKHE 297 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEE--EEEE
T ss_pred CCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcce--EEEE
Confidence 00 1123788999887764 333221 12345689999998664442 21 235777787543221 1111
Q ss_pred cCCCCC----CceeEEcCCCC-EEEE
Q 018144 249 ENLPGA----PDNINLAPDGT-FWIA 269 (360)
Q Consensus 249 ~~~~g~----pd~i~~d~~G~-lwva 269 (360)
....+. +..+++.+||+ |++.
T Consensus 298 ~~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 298 DESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp EECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred eccCCEEeccCCCceEcCCCCeEEEE
Confidence 111121 24678888886 4443
No 268
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.89 E-value=0.054 Score=48.29 Aligned_cols=99 Identities=8% Similarity=0.039 Sum_probs=62.8
Q ss_pred ccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcC-CCCeEEEEeC--CCcCcceEEEecCCCEEEEEe
Q 018144 150 FANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP-SSNITTLVAD--GFYFANGVALSRDEDYVVVCE 225 (360)
Q Consensus 150 ~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~-~tg~~~~~~~--~l~~pngia~~~dg~~l~v~~ 225 (360)
.+..+++.++|+ ..++ +...|.|..+|. .+++...+.. .......+++++ ++.++.+.
T Consensus 58 ~v~~~~~~~~~~~~l~~-----------------~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~ 119 (342)
T 1yfq_A 58 PLLCCNFIDNTDLQIYV-----------------GTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAAS 119 (342)
T ss_dssp CEEEEEEEESSSEEEEE-----------------EETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEE
T ss_pred ceEEEEECCCCCcEEEE-----------------EcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEc
Confidence 467888999898 5554 233578999998 8787765544 444567899999 77565555
Q ss_pred CCCCEEEEEEecC---------CcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 226 SWKFRCRKYWLKG---------ERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 226 t~~~~i~~~~~~g---------~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
..+.|..+++.. .+. ...+ ...+.+..+.+++++ +.++...
T Consensus 120 -~d~~i~iwd~~~~~~~~~~~~~~~--~~~~--~~~~~v~~~~~~~~~-l~~~~~d 169 (342)
T 1yfq_A 120 -WDGLIEVIDPRNYGDGVIAVKNLN--SNNT--KVKNKIFTMDTNSSR-LIVGMNN 169 (342)
T ss_dssp -TTSEEEEECHHHHTTBCEEEEESC--SSSS--SSCCCEEEEEECSSE-EEEEEST
T ss_pred -CCCeEEEEcccccccccccccCCe--eeEE--eeCCceEEEEecCCc-EEEEeCC
Confidence 457788887653 110 1111 133345667777776 6666544
No 269
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.89 E-value=0.17 Score=45.48 Aligned_cols=72 Identities=14% Similarity=0.010 Sum_probs=46.8
Q ss_pred ccccEEEcCC--CcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE---EeCCCcCcceEEEecC--CCEEE
Q 018144 150 FANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL---VADGFYFANGVALSRD--EDYVV 222 (360)
Q Consensus 150 ~~n~l~~d~d--G~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~---~~~~l~~pngia~~~d--g~~l~ 222 (360)
.+..+++.++ |++.++ +..+|.|..+|..+++... +.........++++++ ++.++
T Consensus 57 ~v~~~~~~~~~~~~~l~s-----------------~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 119 (379)
T 3jrp_A 57 PVWRVDWAHPKFGTILAS-----------------CSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLL 119 (379)
T ss_dssp CEEEEEECCGGGCSEEEE-----------------EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred cEEEEEeCCCCCCCEEEE-----------------eccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEE
Confidence 4667787755 776664 2235677778877675322 2223345678999998 87666
Q ss_pred EEeCCCCEEEEEEecCC
Q 018144 223 VCESWKFRCRKYWLKGE 239 (360)
Q Consensus 223 v~~t~~~~i~~~~~~g~ 239 (360)
++. ..+.|..+++...
T Consensus 120 ~~~-~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 120 VAS-SDGKVSVVEFKEN 135 (379)
T ss_dssp EEE-TTSEEEEEECCTT
T ss_pred Eec-CCCcEEEEecCCC
Confidence 555 4578998988653
No 270
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.89 E-value=0.16 Score=50.93 Aligned_cols=105 Identities=15% Similarity=0.001 Sum_probs=60.2
Q ss_pred cccEEEcCCCc-EEE-EeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCc--ceEEEecCCCEEEEEeC
Q 018144 151 ANDVVEASDGS-LYF-TVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA--NGVALSRDEDYVVVCES 226 (360)
Q Consensus 151 ~n~l~~d~dG~-l~v-td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~p--ngia~~~dg~~l~v~~t 226 (360)
..++.+++||+ |.+ .+.+ +.....|+.+|.++|+... ...+... .++++++||+.++.+..
T Consensus 123 ~~~~~~SPDG~~la~~~~~~--------------G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~ 187 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPN--------------AADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWL 187 (695)
T ss_dssp EEEEEECTTSSEEEEEEEET--------------TCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTSSEEEEEEC
T ss_pred EEEEEECCCCCEEEEEECCC--------------CCceEEEEEEECCCCCCcC-CcccCcccccceEEecCCCEEEEEEe
Confidence 45678889996 333 2211 2223578999998887530 1112222 68999999998877765
Q ss_pred C------------CCEEEEEEecCCcCcceeeeccC-CCCCCceeEEcCCCC-EEEEE
Q 018144 227 W------------KFRCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGT-FWIAI 270 (360)
Q Consensus 227 ~------------~~~i~~~~~~g~~~~~~~~~~~~-~~g~pd~i~~d~~G~-lwva~ 270 (360)
. ...|+++++.+.......++... .+....++.+++||. |.++.
T Consensus 188 d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~ 245 (695)
T 2bkl_A 188 PTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYI 245 (695)
T ss_dssp CCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEE
T ss_pred cCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEE
Confidence 2 23488888765432222333211 112234677899996 44443
No 271
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.87 E-value=0.22 Score=46.10 Aligned_cols=143 Identities=13% Similarity=0.098 Sum_probs=81.0
Q ss_pred CCCcceEEEcCCCCEEEEecCCeEEEEE-C-Ce-ee------------------EEEe-cCC-e-EEEEeCCCcEEEEc-
Q 018144 78 VNHPEDASMDKNGVIYTATRDGWIKRLQ-D-GT-WV------------------NWKF-IDS-H-LIICDNANGLHKVS- 132 (360)
Q Consensus 78 ~~~Pe~i~~d~~G~l~v~~~~G~I~~~~-~-g~-~~------------------~~~~-~~g-~-L~v~~~~~gl~~~~- 132 (360)
-....++++.++|.+.++..+|.|..++ . +. .. .+.. +++ . |..+..++.+..++
T Consensus 177 ~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 177 TYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp SSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred CcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 3456788999988877666788888888 4 21 11 1111 233 3 44555444566666
Q ss_pred CCC-e-----EEEeeccCCcc-------ccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCC-Ce
Q 018144 133 EDG-V-----ENFLSYVNGSK-------LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NI 198 (360)
Q Consensus 133 ~~g-~-----~~l~~~~~~~~-------~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t-g~ 198 (360)
.++ . ..+........ ...+..++++++|.+.++ +.. +.|..+|..+ ++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-----------------~~~-~~v~iwd~~~~~~ 318 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMT-----------------RDY-LSVKVWDLNMENR 318 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEE-----------------EES-SEEEEEETTCCSS
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEE-----------------eeC-CeEEEEeCCCCcc
Confidence 444 3 22211100000 015778999999987775 223 6788888764 43
Q ss_pred EEEEeCCCcC----------------cceEEEecCCCEEEEEeCCCCEEEEEEecCC
Q 018144 199 TTLVADGFYF----------------ANGVALSRDEDYVVVCESWKFRCRKYWLKGE 239 (360)
Q Consensus 199 ~~~~~~~l~~----------------pngia~~~dg~~l~v~~t~~~~i~~~~~~g~ 239 (360)
.......... ...+++++|++.+ ++.+..+.|..++.+..
T Consensus 319 ~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 319 PVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV-MTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE-EEECSTTEEEEEETTTC
T ss_pred ccceeeccccccccccccccccccccceEEEECCCCCEE-EEeccCCEEEEEEcCCC
Confidence 2211111111 1238999999866 55556778988987643
No 272
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.86 E-value=0.22 Score=44.00 Aligned_cols=166 Identities=13% Similarity=0.108 Sum_probs=87.0
Q ss_pred ceEEEcCCCC-EEEEecCCeEEEEE--CCee-eEE----------Ee-cCCe-EEEEeCCCcEEEEc-CCC--eEEEeec
Q 018144 82 EDASMDKNGV-IYTATRDGWIKRLQ--DGTW-VNW----------KF-IDSH-LIICDNANGLHKVS-EDG--VENFLSY 142 (360)
Q Consensus 82 e~i~~d~~G~-l~v~~~~G~I~~~~--~g~~-~~~----------~~-~~g~-L~v~~~~~gl~~~~-~~g--~~~l~~~ 142 (360)
.++++.+++. |.+++.+|.|..++ +++. ..+ .. +++. |..+..++-+..++ .++ ......
T Consensus 59 ~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~- 137 (304)
T 2ynn_A 59 RAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE- 137 (304)
T ss_dssp EEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEEC-
T ss_pred EEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhc-
Confidence 4566766665 45566888888888 4432 111 11 2333 44444444455556 444 221111
Q ss_pred cCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE-EeCC-CcCcceEEEec--C
Q 018144 143 VNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADG-FYFANGVALSR--D 217 (360)
Q Consensus 143 ~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~-~~~~-l~~pngia~~~--d 217 (360)
+. ...+..+++.+ ++.+.++ +...+.|..+|..+++... +..+ ....+.+++.+ +
T Consensus 138 --~h-~~~v~~v~~~p~~~~~l~s-----------------gs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 197 (304)
T 2ynn_A 138 --GH-EHFVMCVAFNPKDPSTFAS-----------------GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPD 197 (304)
T ss_dssp --CC-CSCEEEEEECTTCTTEEEE-----------------EETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTT
T ss_pred --cc-CCcEEEEEECCCCCCEEEE-----------------EeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCC
Confidence 11 13467888887 5666665 2345678888875443221 2222 22345566665 6
Q ss_pred CCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 218 EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 218 g~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
+..++ +.+..+.|..+++...+ ....+. ........+++.+++.+.++...
T Consensus 198 ~~~l~-s~s~D~~i~iWd~~~~~--~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~ 248 (304)
T 2ynn_A 198 KPYMI-TASDDLTIKIWDYQTKS--CVATLE-GHMSNVSFAVFHPTLPIIISGSE 248 (304)
T ss_dssp CCEEE-EEETTSEEEEEETTTTE--EEEEEE-CCSSCEEEEEECSSSSEEEEEET
T ss_pred CCEEE-EEcCCCeEEEEeCCCCc--cceeeC-CCCCCEEEEEECCCCCEEEEEcC
Confidence 66444 44456788888875321 112221 12223445778888886665443
No 273
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.85 E-value=0.13 Score=46.13 Aligned_cols=100 Identities=14% Similarity=0.125 Sum_probs=61.7
Q ss_pred cccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCC--
Q 018144 151 ANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESW-- 227 (360)
Q Consensus 151 ~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~-- 227 (360)
+..+.+++||+ |.++... .......|+.+|.++++...+..... ...++++|||+.++++...
T Consensus 61 ~~~~~~SpDg~~la~~~~~-------------~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~ 126 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRAN-------------EEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRR 126 (347)
T ss_dssp CEEEEECTTSSEEEEEEEE-------------TTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCC
T ss_pred CCCeEECCCCCEEEEEEec-------------cCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCC
Confidence 45678899995 5553211 00123469999988887766543333 7789999999988777532
Q ss_pred ------------------------CCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEE
Q 018144 228 ------------------------KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAI 270 (360)
Q Consensus 228 ------------------------~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~ 270 (360)
...|+++++++.+. ...+.. + ....+.+.++| +.+..
T Consensus 127 ~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~--~~~l~~--~-~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 127 EDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV--IEEFEK--P-RFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp C---------CCCC---------CEEEEEEEETTTTEE--EEEEEE--E-TTCEEEEETTE-EEEEE
T ss_pred CcCCcEEEcccceeecCcccccCccceEEEEECCCCeE--EeeecC--C-CcccccCCCCe-EEEEE
Confidence 24688888765332 022222 2 35677888888 55544
No 274
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.091 Score=54.61 Aligned_cols=168 Identities=13% Similarity=0.107 Sum_probs=98.5
Q ss_pred CCcceEEEcCCCCEE-EEecCCeEEEEE-C-Ce----------eeEEEecCCe-EEEEeCCCcEEEEc-CCC--eEEEee
Q 018144 79 NHPEDASMDKNGVIY-TATRDGWIKRLQ-D-GT----------WVNWKFIDSH-LIICDNANGLHKVS-EDG--VENFLS 141 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~-v~~~~G~I~~~~-~-g~----------~~~~~~~~g~-L~v~~~~~gl~~~~-~~g--~~~l~~ 141 (360)
....+++++++|.+. +|+.+|.|..++ . ++ +..+.+..|+ |..++.++.+...+ .++ +..+.
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~~~- 96 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTTVF- 96 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEEEEE-
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEEEEc-
Confidence 467889999988755 555889888877 3 22 2222322354 55555555566667 555 33332
Q ss_pred ccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe-----------C-CCcCc
Q 018144 142 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-----------D-GFYFA 209 (360)
Q Consensus 142 ~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~-----------~-~l~~p 209 (360)
.. ..+..++++++|+..++ +...|.|..+|..+++...+. . .....
T Consensus 97 -~~----~~V~~v~~sp~g~~l~s-----------------gs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V 154 (902)
T 2oaj_A 97 -VP----GKITSIDTDASLDWMLI-----------------GLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPI 154 (902)
T ss_dssp -CS----SCEEEEECCTTCSEEEE-----------------EETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCC
T ss_pred -CC----CCEEEEEECCCCCEEEE-----------------EcCCCcEEEEECCCCccccceeccccccccccccCCCCe
Confidence 11 24678889999975553 334577888998877653211 1 12346
Q ss_pred ceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccC-----------------CCCCCceeEEcCCCCEEEEEec
Q 018144 210 NGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN-----------------LPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 210 ngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~-----------------~~g~pd~i~~d~~G~lwva~~~ 272 (360)
..++++|++..++++....+.| .++++..+. ...+... .......+++.++|++.++...
T Consensus 155 ~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~ 231 (902)
T 2oaj_A 155 VSIQWNPRDIGTVLISYEYVTL-TYSLVENEI--KQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE 231 (902)
T ss_dssp CEEEEETTEEEEEEEECSSCEE-EEETTTTEE--EEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET
T ss_pred EEEEEccCCCCEEEEEeCCCcE-EEECCCCce--EEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEEC
Confidence 7899999753355555566777 888754321 1122111 0122456778899986665544
No 275
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.84 E-value=0.017 Score=56.17 Aligned_cols=116 Identities=17% Similarity=0.194 Sum_probs=72.1
Q ss_pred CcceEEEecCCCEEEEEeCCC---------------------CEEEEEEecCCc----Ccceeeecc-------------
Q 018144 208 FANGVALSRDEDYVVVCESWK---------------------FRCRKYWLKGER----KGKLETFAE------------- 249 (360)
Q Consensus 208 ~pngia~~~dg~~l~v~~t~~---------------------~~i~~~~~~g~~----~~~~~~~~~------------- 249 (360)
.|-+++++|....+|++-|++ +.|+++..++.. ..+.+++..
T Consensus 385 RpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~~~ 464 (592)
T 4a9v_A 385 RPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPKG 464 (592)
T ss_dssp CEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGGG
T ss_pred CccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccccc
Confidence 466889988555599987642 578998875421 111233321
Q ss_pred --------CCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEE
Q 018144 250 --------NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTII 320 (360)
Q Consensus 250 --------~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~ 320 (360)
..-..|||+++|++|+||+++-..... .. .........|+++++ .|++.
T Consensus 465 g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~------------------~g----~~~~~gnn~v~~~dp~tGel~ 522 (592)
T 4a9v_A 465 GSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSN------------------AG----DFAGMGNNQMLCADPATGEIR 522 (592)
T ss_dssp CCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCC------------------SG----GGTTCCSCEEEEECTTTCCEE
T ss_pred CccCccccCccCCCCceEECCCCCEEEEeCCCcCc------------------cc----cccccCCceEEEEeCCCCeEE
Confidence 011359999999999999966542100 00 000112358999998 57877
Q ss_pred EEEeCCCCCcccceeeEEEE--CCEEEEEe
Q 018144 321 RNLVDPTGQLMSFVTSGLQV--DNHLYVIS 348 (360)
Q Consensus 321 ~~~~~~~g~~~~~~t~~~~~--~g~Lylgs 348 (360)
..+..|.+ ..++++.+. +..||+.-
T Consensus 523 ~fl~~P~~---aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 523 RFMVGPIG---CEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEECCTT---CEEEEEEECTTSSEEEEEE
T ss_pred EEEeCCCC---ccccCCEECCCCCEEEEEE
Confidence 77766665 367888886 36899874
No 276
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.80 E-value=0.18 Score=46.77 Aligned_cols=139 Identities=13% Similarity=0.066 Sum_probs=79.1
Q ss_pred CCcceEEEcCCCC-EEEEecCCeEEEEE-C----Ceee---------EEEe-----------------cCCe-EEEEeCC
Q 018144 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ-D----GTWV---------NWKF-----------------IDSH-LIICDNA 125 (360)
Q Consensus 79 ~~Pe~i~~d~~G~-l~v~~~~G~I~~~~-~----g~~~---------~~~~-----------------~~g~-L~v~~~~ 125 (360)
....++++.+++. |.+++.+|.|..++ . ++.. .+.. .++. |+.++.+
T Consensus 112 ~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 191 (437)
T 3gre_A 112 STVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNL 191 (437)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETT
T ss_pred CCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCC
Confidence 3456788888775 55566888776665 2 2111 1110 1233 4455555
Q ss_pred CcEEEEc-CCC--eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEE
Q 018144 126 NGLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV 202 (360)
Q Consensus 126 ~gl~~~~-~~g--~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~ 202 (360)
+.+..++ .++ ...+.... ....+..++++++|...++ +...|.|..+|..+++....
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s-----------------~~~dg~i~iwd~~~~~~~~~ 251 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENSP---RHGAVSSICIDEECCVLIL-----------------GTTRGIIDIWDIRFNVLIRS 251 (437)
T ss_dssp SEEEEEETTTCCEEEEEECCG---GGCCEEEEEECTTSCEEEE-----------------EETTSCEEEEETTTTEEEEE
T ss_pred CeEEEEeCCCCeeeEEEccCC---CCCceEEEEECCCCCEEEE-----------------EcCCCeEEEEEcCCccEEEE
Confidence 5566677 555 33332210 1135788999999987665 23356788899877766443
Q ss_pred e--CCCcCcceEEEe----cCCCEEEEEeCCCCEEEEEEecC
Q 018144 203 A--DGFYFANGVALS----RDEDYVVVCESWKFRCRKYWLKG 238 (360)
Q Consensus 203 ~--~~l~~pngia~~----~dg~~l~v~~t~~~~i~~~~~~g 238 (360)
. ........++++ +++. ++++.+..+.|..+++..
T Consensus 252 ~~~~~~~~v~~~~~~~~~s~~~~-~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 252 WSFGDHAPITHVEVCQFYGKNSV-IVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp EBCTTCEEEEEEEECTTTCTTEE-EEEEESTTEEEEEEETTT
T ss_pred EecCCCCceEEEEeccccCCCcc-EEEEEcCCCcEEEEEcCC
Confidence 2 222234567554 4554 555555566788888753
No 277
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.79 E-value=0.3 Score=45.46 Aligned_cols=52 Identities=10% Similarity=-0.021 Sum_probs=31.1
Q ss_pred CCccEEEEEcCCCCeEEEEeCC-CcCcceEEEecCCCEEEEEeCCCCEEEEEEecC
Q 018144 184 KPHGQLLKYDPSSNITTLVADG-FYFANGVALSRDEDYVVVCESWKFRCRKYWLKG 238 (360)
Q Consensus 184 ~~~g~l~~~d~~tg~~~~~~~~-l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g 238 (360)
...|.|..+|..+++......+ ......+++ +++.++.+. ..+.|..+++..
T Consensus 273 ~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~-~dg~i~iwd~~~ 325 (435)
T 1p22_A 273 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGS-SDNTIRLWDIEC 325 (435)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEE-TTSCEEEEETTT
T ss_pred eCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEe-CCCeEEEEECCC
Confidence 3457888899887765443322 223344555 456555554 456788888753
No 278
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.78 E-value=0.42 Score=47.91 Aligned_cols=81 Identities=9% Similarity=0.007 Sum_probs=46.3
Q ss_pred ccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCC--eEEEEeCCCcCcceEEEecCCCEEEEEeCC-
Q 018144 152 NDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN--ITTLVADGFYFANGVALSRDEDYVVVCESW- 227 (360)
Q Consensus 152 n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg--~~~~~~~~l~~pngia~~~dg~~l~v~~t~- 227 (360)
.++.+++||+ |+++-.. ....+.|+.+|.+++ +.+.+......-.. .++++|+.+|+....
T Consensus 237 ~~~~~SpDg~~l~~~~~~--------------~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~~~~g~~l~~~t~~~ 301 (693)
T 3iuj_A 237 VGATVTEDDRFLLISAAN--------------STSGNRLYVKDLSQENAPLLTVQGDLDADVS-LVDNKGSTLYLLTNRD 301 (693)
T ss_dssp EEEEECTTSCEEEEEEES--------------SSSCCEEEEEETTSTTCCCEEEECSSSSCEE-EEEEETTEEEEEECTT
T ss_pred EEEEEcCCCCEEEEEEcc--------------CCCCcEEEEEECCCCCCceEEEeCCCCceEE-EEeccCCEEEEEECCC
Confidence 4567889996 5554322 112347888887655 45555433222112 267777777776543
Q ss_pred --CCEEEEEEecCCcCcceeee
Q 018144 228 --KFRCRKYWLKGERKGKLETF 247 (360)
Q Consensus 228 --~~~i~~~~~~g~~~~~~~~~ 247 (360)
+.+|+++++++......+.+
T Consensus 302 ~~~~~l~~~d~~~~~~~~~~~l 323 (693)
T 3iuj_A 302 APNRRLVTVDAANPGPAHWRDL 323 (693)
T ss_dssp CTTCEEEEEETTSCCGGGCEEE
T ss_pred CCCCEEEEEeCCCCCccccEEE
Confidence 36899999876443333333
No 279
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.77 E-value=0.006 Score=55.76 Aligned_cols=103 Identities=15% Similarity=0.046 Sum_probs=56.5
Q ss_pred ccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCe----EEEEeCCCcCcceEEEecCCCEEEEEe
Q 018144 150 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI----TTLVADGFYFANGVALSRDEDYVVVCE 225 (360)
Q Consensus 150 ~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~----~~~~~~~l~~pngia~~~dg~~l~v~~ 225 (360)
.+..+++.++|++.++- ...+.|..+|..+++ ...+.........++++++++.++.+.
T Consensus 57 ~v~~~~~s~~~~~l~s~-----------------s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 119 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTC-----------------SQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGS 119 (377)
T ss_dssp CEEEEEECTTTCCEEEE-----------------ETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEE
T ss_pred eEEEEEEeCCCCEEEEE-----------------eCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEe
Confidence 46788999998766642 234667778876665 222223334567899999998666665
Q ss_pred CCCCEEEEEEecCCcC-cceeeeccCCCCCCceeEEcCCCCEEEEE
Q 018144 226 SWKFRCRKYWLKGERK-GKLETFAENLPGAPDNINLAPDGTFWIAI 270 (360)
Q Consensus 226 t~~~~i~~~~~~g~~~-~~~~~~~~~~~g~pd~i~~d~~G~lwva~ 270 (360)
. .+.|..++++.... .....+.....+....+++.++|++.++.
T Consensus 120 ~-d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 120 G-ARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp S-SSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred c-CCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 4 45687777754321 11223322133445677888888755543
No 280
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.76 E-value=0.15 Score=47.59 Aligned_cols=154 Identities=6% Similarity=-0.058 Sum_probs=89.5
Q ss_pred ccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeE--------EEEeCCCcCcceEEEecCCCE
Q 018144 150 FANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT--------TLVADGFYFANGVALSRDEDY 220 (360)
Q Consensus 150 ~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~--------~~~~~~l~~pngia~~~dg~~ 220 (360)
.+..+++.+++. +.++- ...|.|..+|..++.. ..+.......+.+++++++..
T Consensus 183 ~v~~l~~~~~~~~~l~s~-----------------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 245 (430)
T 2xyi_A 183 EGYGLSWNPNLNGYLLSA-----------------SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHES 245 (430)
T ss_dssp CCCCEEECTTSTTEEEEE-----------------CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTT
T ss_pred CeEEEEeCCCCCCeEEEE-----------------eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCC
Confidence 467889998886 66652 2356788888765211 112222335678999995444
Q ss_pred EEEEeCCCCEEEEEEecCCc-CcceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchhHHHHHHhCCccc
Q 018144 221 VVVCESWKFRCRKYWLKGER-KGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLF 298 (360)
Q Consensus 221 l~v~~t~~~~i~~~~~~g~~-~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 298 (360)
++++....+.|..|++.... ......+. .....+..+.+.++|. ++++...
T Consensus 246 ~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~v~~i~~~p~~~~~l~tg~~-------------------------- 298 (430)
T 2xyi_A 246 LFGSVADDQKLMIWDTRNNNTSKPSHTVD-AHTAEVNCLSFNPYSEFILATGSA-------------------------- 298 (430)
T ss_dssp EEEEEETTSEEEEEETTCSCSSSCSEEEE-CCSSCEEEEEECSSCTTEEEEEET--------------------------
T ss_pred EEEEEeCCCeEEEEECCCCCCCcceeEee-cCCCCeEEEEeCCCCCCEEEEEeC--------------------------
Confidence 66666667889999986432 11122221 2333467788999885 5544433
Q ss_pred cccccCCCceEEEEECCC--CcEEEEEeCCCCCcccceeeEEEEC-C-EEEEEeCCCCeEEEEeC
Q 018144 299 SQFITLGGGAHLIHVAED--GTIIRNLVDPTGQLMSFVTSGLQVD-N-HLYVISLTSNFIGKVQL 359 (360)
Q Consensus 299 ~~~~~~~~~~~v~~~~~~--g~~~~~~~~~~g~~~~~~t~~~~~~-g-~Lylgs~~~~~i~~~~l 359 (360)
.+.|..+|.. ++.+..+.... ..++++.... + .+++.+-..+.|.++++
T Consensus 299 --------dg~v~vwd~~~~~~~~~~~~~h~----~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~ 351 (430)
T 2xyi_A 299 --------DKTVALWDLRNLKLKLHSFESHK----DEIFQVQWSPHNETILASSGTDRRLHVWDL 351 (430)
T ss_dssp --------TSEEEEEETTCTTSCSEEEECCS----SCEEEEEECSSCTTEEEEEETTSCCEEEEG
T ss_pred --------CCeEEEEeCCCCCCCeEEeecCC----CCEEEEEECCCCCCEEEEEeCCCcEEEEeC
Confidence 2456666642 44455554332 2466666653 3 45665555667776654
No 281
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.72 E-value=0.3 Score=43.69 Aligned_cols=103 Identities=11% Similarity=0.046 Sum_probs=55.4
Q ss_pred ccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCC-------CeEEEEeC-CCcCcceEEEecCCCEE
Q 018144 150 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-------NITTLVAD-GFYFANGVALSRDEDYV 221 (360)
Q Consensus 150 ~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t-------g~~~~~~~-~l~~pngia~~~dg~~l 221 (360)
.++.+++.++|.+.++- ...+.|..+|..+ .+...... .....+.++++|+++.|
T Consensus 60 ~v~~v~~sp~~~~las~-----------------s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l 122 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAG-----------------SFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYL 122 (330)
T ss_dssp CEEEEEECTTSSEEEEE-----------------ETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEE
T ss_pred CEEEEEECCCCCEEEEE-----------------eCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEE
Confidence 46678888888766652 2244566665531 12211122 22346789999999866
Q ss_pred EEEeCCCCEEEEEEecCC-cC-cceeeeccCCCCCCceeEEcCCCCEEEEEe
Q 018144 222 VVCESWKFRCRKYWLKGE-RK-GKLETFAENLPGAPDNINLAPDGTFWIAII 271 (360)
Q Consensus 222 ~v~~t~~~~i~~~~~~g~-~~-~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 271 (360)
..+. ..+.|..++++.. .. .....+. ........+.+.++|++.++..
T Consensus 123 as~s-~D~~v~iwd~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s 172 (330)
T 2hes_X 123 ATCS-RDKSVWIWETDESGEEYECISVLQ-EHSQDVKHVIWHPSEALLASSS 172 (330)
T ss_dssp EEEE-TTSCEEEEECCTTCCCCEEEEEEC-CCSSCEEEEEECSSSSEEEEEE
T ss_pred EEEe-CCCEEEEEeccCCCCCeEEEEEec-cCCCceEEEEECCCCCEEEEEc
Confidence 5554 4567888887321 11 1112222 2223345677788887666544
No 282
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.64 E-value=0.026 Score=55.50 Aligned_cols=115 Identities=17% Similarity=0.212 Sum_probs=72.0
Q ss_pred CcceEEEecCCCEEEEEeCCC---------------------CEEEEEEecCCcCc----ceeeecc-------------
Q 018144 208 FANGVALSRDEDYVVVCESWK---------------------FRCRKYWLKGERKG----KLETFAE------------- 249 (360)
Q Consensus 208 ~pngia~~~dg~~l~v~~t~~---------------------~~i~~~~~~g~~~~----~~~~~~~------------- 249 (360)
.|.++.+++....+|++-|++ +.|++|..++.... +.+++..
T Consensus 385 RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~~~ 464 (592)
T 3zwu_A 385 RPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPKG 464 (592)
T ss_dssp CEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGGG
T ss_pred ccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccccccc
Confidence 467899998544599997742 46999987643211 1122210
Q ss_pred --------CCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEE
Q 018144 250 --------NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTII 320 (360)
Q Consensus 250 --------~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~ 320 (360)
+.-..||||++|++|+|||++-+..+...++ .......++.+++ .|++.
T Consensus 465 ~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~----------------------~~~gnn~~~~~~~~~g~~~ 522 (592)
T 3zwu_A 465 GSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDF----------------------AGMGNNQMLCADPATGEIR 522 (592)
T ss_dssp CCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGG----------------------TTTCSCEEEEECTTTCCEE
T ss_pred cccccCCCCCccCCcceEECCCCCEEEEecCCCcccccc----------------------cccccceEEEEeCCCCeEE
Confidence 0112599999999999999987632111000 0112346777776 47777
Q ss_pred EEEeCCCCCcccceeeEEEEC--CEEEEE
Q 018144 321 RNLVDPTGQLMSFVTSGLQVD--NHLYVI 347 (360)
Q Consensus 321 ~~~~~~~g~~~~~~t~~~~~~--g~Lylg 347 (360)
..+..|.|. .++++.+.. ..||+.
T Consensus 523 rf~~~P~ga---E~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 523 RFMVGPIGC---EVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEECCTTC---EEEEEEECTTSSEEEEE
T ss_pred EEEeCCCCc---cCcCeeECCCCCEEEEE
Confidence 777777764 788888863 578875
No 283
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.59 E-value=0.25 Score=48.58 Aligned_cols=100 Identities=17% Similarity=0.214 Sum_probs=57.5
Q ss_pred CCCEEEEecCCeEEEEE--CCeee--E------------------EEecCCeEEEEeCCCcEEEEc-CCC-eEEEeeccC
Q 018144 89 NGVIYTATRDGWIKRLQ--DGTWV--N------------------WKFIDSHLIICDNANGLHKVS-EDG-VENFLSYVN 144 (360)
Q Consensus 89 ~G~l~v~~~~G~I~~~~--~g~~~--~------------------~~~~~g~L~v~~~~~gl~~~~-~~g-~~~l~~~~~ 144 (360)
+|.||+++..+.|+.+| +|+.. . ....++++|+++.+..|+.+| .+| ...-.....
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~ 147 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFAD 147 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECSC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecCCC
Confidence 78999999756699999 67532 0 012367899998888899999 788 432211111
Q ss_pred ---CccccccccEEEcC--CC--cEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE
Q 018144 145 ---GSKLRFANDVVEAS--DG--SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL 201 (360)
Q Consensus 145 ---~~~~~~~n~l~~d~--dG--~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~ 201 (360)
+..+... -+..+. +| .||+...+.. ....|.|+.+|..||+...
T Consensus 148 ~~~~~~~~~s-P~v~~~~~~G~~~v~vg~~~~e------------~~~~g~v~alD~~tG~~~W 198 (582)
T 1flg_A 148 HGAGYTMTGA-PTIVKDGKTGKVLLIHGSSGDE------------FGVVGRLFARDPDTGEEIW 198 (582)
T ss_dssp GGGTCBCCSC-CEEEECTTTCCEEEEECCBCGG------------GCCBCEEEEECTTTCCEEE
T ss_pred CCcCcccccC-CEEeCCCcCCcEEEEEeccccc------------cCCCCEEEEEECCCCCEEe
Confidence 0011111 111221 23 6777432210 1125789999998888654
No 284
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.59 E-value=0.45 Score=44.05 Aligned_cols=216 Identities=11% Similarity=-0.026 Sum_probs=110.8
Q ss_pred ceEEEcCCCCE-EEEecCCeEEEEE--CCeeeE-----------EEecCCeEEEEeCCCcEEEEc-CCC---eEEEeecc
Q 018144 82 EDASMDKNGVI-YTATRDGWIKRLQ--DGTWVN-----------WKFIDSHLIICDNANGLHKVS-EDG---VENFLSYV 143 (360)
Q Consensus 82 e~i~~d~~G~l-~v~~~~G~I~~~~--~g~~~~-----------~~~~~g~L~v~~~~~gl~~~~-~~g---~~~l~~~~ 143 (360)
.++++.++|.. .+|+.+|.|..++ +++... +...+..|..+..+..+...+ ... +..+. ..
T Consensus 151 ~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~-~h 229 (420)
T 4gga_A 151 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLS-GH 229 (420)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEE-CC
T ss_pred EEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEec-cc
Confidence 57888888764 4566888888887 443221 112222344444344444444 222 22221 11
Q ss_pred CCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeE-----EEEeCCCcCcceEEEecCC
Q 018144 144 NGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT-----TLVADGFYFANGVALSRDE 218 (360)
Q Consensus 144 ~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~-----~~~~~~l~~pngia~~~dg 218 (360)
...+..+...++|...++- ...+.+..++..+++. ............+++++++
T Consensus 230 ----~~~~~~~~~~~~g~~l~s~-----------------~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~ 288 (420)
T 4gga_A 230 ----SQEVCGLRWAPDGRHLASG-----------------GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQ 288 (420)
T ss_dssp ----SSCEEEEEECTTSSEEEEE-----------------ETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTC
T ss_pred ----ccceeeeeecCCCCeeeee-----------------eccccceEEeeccccccceeeeeecccCCceeeeeeCCCc
Confidence 1235567777888766642 2245566666654432 1122222345678888876
Q ss_pred CEEEEEe--CCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCc
Q 018144 219 DYVVVCE--SWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 296 (360)
Q Consensus 219 ~~l~v~~--t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~ 296 (360)
..++++. +..+.|..+++..... ...+. .......+...++++..++..+..
T Consensus 289 ~~~la~~~gs~D~~I~iwd~~t~~~--~~~~~--~~~~v~~~~~~~~~~~lv~~sg~~---------------------- 342 (420)
T 4gga_A 289 SNVLATGGGTSDRHIRIWNVCSGAC--LSAVD--AHSQVCSILWSPHYKELISGHGFA---------------------- 342 (420)
T ss_dssp TTEEEEEECTTTCEEEEEETTTTEE--EEEEE--CSSCEEEEEEETTTTEEEEEECTT----------------------
T ss_pred ccEEEEEeecCCCEEEEEeCCcccc--ceeec--cccceeeeeecCCCCeEEEEEecC----------------------
Confidence 5455443 3345677777653211 11111 122345666777777655543310
Q ss_pred cccccccCCCceEEEEEC-CCCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCCeEEEEeC
Q 018144 297 LFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 297 ~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~~~l 359 (360)
.+.|..+| ++++.+..+..-. ..++++... +|.+.+..-....|...++
T Consensus 343 ----------d~~I~iwd~~~~~~v~~l~gH~----~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 343 ----------QNQLVIWKYPTMAKVAELKGHT----SRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp ----------TCCEEEEETTTCCEEEEECCCS----SCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred ----------CCEEEEEECCCCcEEEEEcCCC----CCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 24566666 4677777775433 346777665 3544444334455655543
No 285
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.55 E-value=0.5 Score=47.32 Aligned_cols=106 Identities=10% Similarity=0.001 Sum_probs=60.6
Q ss_pred ccccEEEcCCCc--EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCC
Q 018144 150 FANDVVEASDGS--LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESW 227 (360)
Q Consensus 150 ~~n~l~~d~dG~--l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~ 227 (360)
...++.+++||+ +|..|.+ +.....|+.+|.++|+.......-....+++++ ||+.++++...
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~--------------G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~ 194 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLA--------------GSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYD 194 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECS--------------SCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESS
T ss_pred EEEEEEECCCCCEEEEEEecC--------------CCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEec
Confidence 456778999996 4444432 222347889999988864331111113578899 99988887644
Q ss_pred ------------CCEEEEEEecCCcCcceeeeccCC--CCCCceeEEcCCCC-EEEEE
Q 018144 228 ------------KFRCRKYWLKGERKGKLETFAENL--PGAPDNINLAPDGT-FWIAI 270 (360)
Q Consensus 228 ------------~~~i~~~~~~g~~~~~~~~~~~~~--~g~pd~i~~d~~G~-lwva~ 270 (360)
...|+++++.........++.... +..-.++.+++||. |.+..
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~ 252 (693)
T 3iuj_A 195 KPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISA 252 (693)
T ss_dssp CCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEE
T ss_pred CcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEE
Confidence 245888887543322233443211 11223566789997 44443
No 286
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.46 E-value=0.16 Score=50.90 Aligned_cols=153 Identities=8% Similarity=-0.028 Sum_probs=75.4
Q ss_pred cceEEEcCCCC-EEEEec---------CCeEEEEE--CCee---eEE-------E-ecCC-eEEEEeCCCcEEEEc-CCC
Q 018144 81 PEDASMDKNGV-IYTATR---------DGWIKRLQ--DGTW---VNW-------K-FIDS-HLIICDNANGLHKVS-EDG 135 (360)
Q Consensus 81 Pe~i~~d~~G~-l~v~~~---------~G~I~~~~--~g~~---~~~-------~-~~~g-~L~v~~~~~gl~~~~-~~g 135 (360)
..++++.+||. |.+++. ++.|+.++ +|+. ..+ . .++| .|..+. .+.|+.++ .+|
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g 140 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGD 140 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCC
Confidence 56788999987 444443 47888888 5554 221 1 1244 344433 55677777 555
Q ss_pred -eEEEeecc-CCcc-------------ccccccEEEcCCCc-EEEEeCCCCCCCccceec---------------cc--c
Q 018144 136 -VENFLSYV-NGSK-------------LRFANDVVEASDGS-LYFTVSSSKYLPHEYCLD---------------IL--E 182 (360)
Q Consensus 136 -~~~l~~~~-~~~~-------------~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~---------------~~--~ 182 (360)
...+.... .... +.....+++.+||+ |.++... .-....+... .. .
T Consensus 141 ~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~ 219 (719)
T 1z68_A 141 PPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN-DTDIPVIAYSYYGDEQYPRTINIPYPKAGA 219 (719)
T ss_dssp CCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE-CTTSCEEEEEECCSSSSCEEEEEECCBTTS
T ss_pred CcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC-CCCCceEEeeccCCCCCccceeecCCCCCC
Confidence 44332111 1000 01225789999996 4443110 0000000000 00 0
Q ss_pred cCCccEEEEEcCCCCeEE---EEe------CCCcCcceEEEecCCCEEEEEe-CCC--CEEEEEE
Q 018144 183 GKPHGQLLKYDPSSNITT---LVA------DGFYFANGVALSRDEDYVVVCE-SWK--FRCRKYW 235 (360)
Q Consensus 183 ~~~~g~l~~~d~~tg~~~---~~~------~~l~~pngia~~~dg~~l~v~~-t~~--~~i~~~~ 235 (360)
......|+.+|.++++.. .+. ........++++||++.++... ... ..|+.++
T Consensus 220 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 220 KNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp CCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred CCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 112236888888766531 221 1122346789999986444322 222 3577888
No 287
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.46 E-value=0.49 Score=42.86 Aligned_cols=86 Identities=16% Similarity=0.112 Sum_probs=50.0
Q ss_pred cCCccEEEEEcCCCCe-----------------EEEEeCCCcCcceEEEecCCCEEEEEeCCCCE-EEEEEecCCcCcce
Q 018144 183 GKPHGQLLKYDPSSNI-----------------TTLVADGFYFANGVALSRDEDYVVVCESWKFR-CRKYWLKGERKGKL 244 (360)
Q Consensus 183 ~~~~g~l~~~d~~tg~-----------------~~~~~~~l~~pngia~~~dg~~l~v~~t~~~~-i~~~~~~g~~~~~~ 244 (360)
+...|.|..+|..+++ ...+.......+.++++|||+.+..+. ..+. |..++....+ ..
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s-~d~~~v~iwd~~~~~--~~ 231 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCS-QDGTIIRVFKTEDGV--LV 231 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEE-TTCSEEEEEETTTCC--EE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEe-CCCCEEEEEECCCCc--EE
Confidence 3456778888887654 333333334567899999998555544 4565 7777775321 12
Q ss_pred eeeccC-CCCCCceeEEcCCCCEEEEEe
Q 018144 245 ETFAEN-LPGAPDNINLAPDGTFWIAII 271 (360)
Q Consensus 245 ~~~~~~-~~g~pd~i~~d~~G~lwva~~ 271 (360)
..+... ..+....++++++|++.++..
T Consensus 232 ~~~~~g~h~~~v~~~~~s~~~~~l~s~s 259 (355)
T 3vu4_A 232 REFRRGLDRADVVDMKWSTDGSKLAVVS 259 (355)
T ss_dssp EEEECTTCCSCEEEEEECTTSCEEEEEE
T ss_pred EEEEcCCCCCcEEEEEECCCCCEEEEEE
Confidence 223211 333455678888887666543
No 288
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.44 E-value=0.14 Score=49.70 Aligned_cols=138 Identities=10% Similarity=0.007 Sum_probs=79.2
Q ss_pred CcceEEEcCCCCEEEEecCCeEEEEE--CCe-e-----------eEE--Ee-cCC-eEEEEeCCCc-EEEEc-CCC--eE
Q 018144 80 HPEDASMDKNGVIYTATRDGWIKRLQ--DGT-W-----------VNW--KF-IDS-HLIICDNANG-LHKVS-EDG--VE 137 (360)
Q Consensus 80 ~Pe~i~~d~~G~l~v~~~~G~I~~~~--~g~-~-----------~~~--~~-~~g-~L~v~~~~~g-l~~~~-~~g--~~ 137 (360)
...++++.+++.|.+|+.||.|..++ ++. . ..+ .. .+| .++++....| +..+| +++ ..
T Consensus 268 ~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~ 347 (524)
T 2j04_B 268 LITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTK 347 (524)
T ss_dssp CEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHC
T ss_pred CEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccc
Confidence 34567777777888888999998888 342 1 112 11 233 4433332333 33344 333 22
Q ss_pred EEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeE-EEEeCCCcCcceEEEec
Q 018144 138 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT-TLVADGFYFANGVALSR 216 (360)
Q Consensus 138 ~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~-~~~~~~l~~pngia~~~ 216 (360)
.+.....+ ..+..+++.++|..+++-+ ..+.|..+|..++.. ..+.......+.++++|
T Consensus 348 ~~~~~~~~---~~v~~v~fsp~~~~l~s~~-----------------~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp 407 (524)
T 2j04_B 348 TTVSRFRG---SNLVPVVYCPQIYSYIYSD-----------------GASSLRAVPSRAAFAVHPLVSRETTITAIGVSR 407 (524)
T ss_dssp EEEEECSC---CSCCCEEEETTTTEEEEEC-----------------SSSEEEEEETTCTTCCEEEEECSSCEEEEECCS
T ss_pred cccccccc---CcccceEeCCCcCeEEEeC-----------------CCCcEEEEECcccccceeeecCCCceEEEEeCC
Confidence 22111111 1256789999998777532 245677788766553 33333334678999999
Q ss_pred CCCEEEEEeCCCCEEEEEEecC
Q 018144 217 DEDYVVVCESWKFRCRKYWLKG 238 (360)
Q Consensus 217 dg~~l~v~~t~~~~i~~~~~~g 238 (360)
+|+.+ ++.+..+.|..+++.+
T Consensus 408 ~g~~l-~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 408 LHPMV-LAGSADGSLIITNAAR 428 (524)
T ss_dssp SCCBC-EEEETTTEEECCBSCS
T ss_pred CCCeE-EEEECCCEEEEEechH
Confidence 99855 4545567787777644
No 289
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.43 E-value=0.49 Score=46.68 Aligned_cols=99 Identities=15% Similarity=0.158 Sum_probs=57.8
Q ss_pred CCCEEEEec-CCeEEEEE---CCeee----------------------EEEe--cCCe----EEEEeCCCcEEEEc-CCC
Q 018144 89 NGVIYTATR-DGWIKRLQ---DGTWV----------------------NWKF--IDSH----LIICDNANGLHKVS-EDG 135 (360)
Q Consensus 89 ~G~l~v~~~-~G~I~~~~---~g~~~----------------------~~~~--~~g~----L~v~~~~~gl~~~~-~~g 135 (360)
+|.||+++. ++.|+.+| +|+.. .... .+++ ||+++.+..|+.+| .+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 778999887 78888887 34321 0112 3566 99988777899999 788
Q ss_pred -eEEEeeccCCcc--ccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE
Q 018144 136 -VENFLSYVNGSK--LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL 201 (360)
Q Consensus 136 -~~~l~~~~~~~~--~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~ 201 (360)
...-.. ..... ......-.+ .+|.||+..+...+ ...|.|+.||.+||+...
T Consensus 142 ~~~W~~~-~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~------------g~~g~v~A~D~~TG~~~W 196 (599)
T 1w6s_A 142 ETVWKVE-NSDIKVGSTLTIAPYV-VKDKVIIGSSGAEL------------GVRGYLTAYDVKTGEQVW 196 (599)
T ss_dssp CEEEEEE-CCCGGGTCBCCSCCEE-ETTEEEECCBCGGG------------TCCCEEEEEETTTCCEEE
T ss_pred CEEEeec-CCCCCccceeecCCEE-ECCEEEEEeccccc------------CCCCeEEEEECCCCcEEE
Confidence 332211 11100 000111123 25788885432110 125789999999998754
No 290
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.42 E-value=0.67 Score=46.72 Aligned_cols=105 Identities=14% Similarity=0.115 Sum_probs=58.6
Q ss_pred cccEEEcCCCc-EEE-EeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCCC
Q 018144 151 ANDVVEASDGS-LYF-TVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK 228 (360)
Q Consensus 151 ~n~l~~d~dG~-l~v-td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~~ 228 (360)
..++.+++||+ |.+ ++.. +.....|+.+|.++|+.......-....++++++| +.++++....
T Consensus 165 ~~~~~~SPDG~~la~~~~~~--------------G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~ 229 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSVQDG--------------GSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAE 229 (741)
T ss_dssp EEEEEECTTSSEEEEEEEET--------------TCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCC
T ss_pred EEeEEECCCCCEEEEEEcCC--------------CCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecC
Confidence 45678899996 333 2211 11224689999988876443111111257899999 8888876432
Q ss_pred -------------CEEEEEEecCCcCcceeeeccC-CCCCCceeEEcCCCC-EEEEE
Q 018144 229 -------------FRCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGT-FWIAI 270 (360)
Q Consensus 229 -------------~~i~~~~~~g~~~~~~~~~~~~-~~g~pd~i~~d~~G~-lwva~ 270 (360)
.+|+++++.+.......++... .+....++.+++||+ |.+..
T Consensus 230 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~ 286 (741)
T 1yr2_A 230 PKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITS 286 (741)
T ss_dssp C--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred cccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEE
Confidence 3588888754332222333211 111234677889996 44433
No 291
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.36 E-value=0.42 Score=47.81 Aligned_cols=104 Identities=11% Similarity=0.075 Sum_probs=55.5
Q ss_pred cccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeC---
Q 018144 151 ANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCES--- 226 (360)
Q Consensus 151 ~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t--- 226 (360)
..++.+++||+ |.++-.. ......|+.++..+++.+.+............ ++|+ +|+...
T Consensus 229 ~~~~~~SpDG~~l~~~~~~--------------~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~ 292 (695)
T 2bkl_A 229 FLQSDLSRDGKYLFVYILR--------------GWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGA 292 (695)
T ss_dssp EEEEEECTTSCCEEEEEEE--------------TTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTC
T ss_pred EEEEEECCCCCEEEEEEeC--------------CCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCC
Confidence 45778899995 5443211 00234688888766776666543333333333 6777 766654
Q ss_pred CCCEEEEEEecCCcCcceeeeccCC-CCCCceeEEcCCCCEEEEEe
Q 018144 227 WKFRCRKYWLKGERKGKLETFAENL-PGAPDNINLAPDGTFWIAII 271 (360)
Q Consensus 227 ~~~~i~~~~~~g~~~~~~~~~~~~~-~g~pd~i~~d~~G~lwva~~ 271 (360)
...+|+++++++......+.+.... .....++.++ ++.+++...
T Consensus 293 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~ 337 (695)
T 2bkl_A 293 PRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYL 337 (695)
T ss_dssp TTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEE
T ss_pred CCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEE
Confidence 3578999988653322222322111 1123345555 556666543
No 292
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.35 E-value=0.016 Score=49.46 Aligned_cols=100 Identities=11% Similarity=0.066 Sum_probs=62.3
Q ss_pred ccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCC-------eEEEEeC-CCcCcceEEEecCCCEE
Q 018144 150 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-------ITTLVAD-GFYFANGVALSRDEDYV 221 (360)
Q Consensus 150 ~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg-------~~~~~~~-~l~~pngia~~~dg~~l 221 (360)
...+++++++|.||.. ..|.|+++++.++ .-+.+-. +...=..+.++++|. |
T Consensus 42 ~~~~laf~P~G~LYaV-------------------~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~-L 101 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-------------------LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGY-L 101 (236)
T ss_dssp TCSEEEECTTSCEEEE-------------------ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSC-E
T ss_pred cceeEEECCCccEEEE-------------------eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCC-E
Confidence 4569999999999995 2468999998662 2222221 222335688999996 8
Q ss_pred EEEeCCCCEEEEEEe--cCCc--CcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 222 VVCESWKFRCRKYWL--KGER--KGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 222 ~v~~t~~~~i~~~~~--~g~~--~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
|++ + .++|+|++. ++.. +.....+.+..=.--.-+.+|++|+||... .
T Consensus 102 Yav-~-dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-d 153 (236)
T 1tl2_A 102 YAV-S-KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-G 153 (236)
T ss_dssp EEE-E-TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-T
T ss_pred EEe-C-CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-C
Confidence 888 3 378999876 2211 111122211000012457889999999988 5
No 293
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.31 E-value=0.18 Score=47.17 Aligned_cols=123 Identities=11% Similarity=0.041 Sum_probs=70.5
Q ss_pred EEEEeCCCcEEEEc-CCC-eEEEeeccCCccccccccEEEcC-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCC
Q 018144 119 LIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS 195 (360)
Q Consensus 119 L~v~~~~~gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 195 (360)
|..|+.++-|..++ .++ ...+... .+. ...+++|++.+ +|++.+|- ..+|.|..+|..
T Consensus 135 lasGs~dg~i~lWd~~~~~~~~~~~~-~gH-~~~V~~l~f~p~~~~~l~s~-----------------s~D~~v~iwd~~ 195 (435)
T 4e54_B 135 VAVGSKGGDIMLWNFGIKDKPTFIKG-IGA-GGSITGLKFNPLNTNQFYAS-----------------SMEGTTRLQDFK 195 (435)
T ss_dssp EEEEETTSCEEEECSSCCSCCEEECC-CSS-SCCCCEEEECSSCTTEEEEE-----------------CSSSCEEEEETT
T ss_pred EEEEeCCCEEEEEECCCCCceeEEEc-cCC-CCCEEEEEEeCCCCCEEEEE-----------------eCCCEEEEeecc
Confidence 44455444555666 444 2222111 111 13578999986 67777752 235678888887
Q ss_pred CCeEEEEeCCC---cCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC
Q 018144 196 SNITTLVADGF---YFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT 265 (360)
Q Consensus 196 tg~~~~~~~~l---~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~ 265 (360)
++....+.... .....++++++++.++ +....+.|..+++++....... ........+.+.++|.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~g~~dg~i~~wd~~~~~~~~~~----~h~~~v~~v~~~p~~~ 263 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVV-TGDNVGNVILLNMDGKELWNLR----MHKKKVTHVALNPCCD 263 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEE-EECSSSBEEEEESSSCBCCCSB----CCSSCEEEEEECTTCS
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEE-EEeCCCcEeeeccCcceeEEEe----cccceEEeeeecCCCc
Confidence 66665544321 2345789999998554 4445678888988764322211 1122345577777775
No 294
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.29 E-value=0.075 Score=53.26 Aligned_cols=116 Identities=9% Similarity=0.031 Sum_probs=66.4
Q ss_pred eEEEcCCCCEEEEecCCeEEEEE--CCeeeEE--------------Ee-cCCe-EEEEeC---------CCcEEEEc-CC
Q 018144 83 DASMDKNGVIYTATRDGWIKRLQ--DGTWVNW--------------KF-IDSH-LIICDN---------ANGLHKVS-ED 134 (360)
Q Consensus 83 ~i~~d~~G~l~v~~~~G~I~~~~--~g~~~~~--------------~~-~~g~-L~v~~~---------~~gl~~~~-~~ 134 (360)
++.+.++|.++..+.+|.|+.++ +|+...+ .. ++|+ |..+.. ...++.++ .+
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 55666677655555667777777 4432221 11 2443 444432 13455555 44
Q ss_pred C-e---EEEeeccCCccccccccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCC---
Q 018144 135 G-V---ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF--- 206 (360)
Q Consensus 135 g-~---~~l~~~~~~~~~~~~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l--- 206 (360)
| . +.+ . ..+..++++|||+ |.++ ..+.|+.+|..+++...+....
T Consensus 100 g~~~~~~~l----~----~~~~~~~~SPDG~~la~~-------------------~~~~i~~~~~~~g~~~~l~~~~~~~ 152 (719)
T 1z68_A 100 GEFVRGNEL----P----RPIQYLCWSPVGSKLAYV-------------------YQNNIYLKQRPGDPPFQITFNGREN 152 (719)
T ss_dssp TEECCSSCC----C----SSBCCEEECSSTTCEEEE-------------------ETTEEEEESSTTSCCEECCCCCBTT
T ss_pred Cccccceec----C----cccccceECCCCCEEEEE-------------------ECCeEEEEeCCCCCcEEEecCCCcC
Confidence 4 3 222 1 2367789999995 5443 1347888888777765543211
Q ss_pred ----------------cCcceEEEecCCCEEEEEe
Q 018144 207 ----------------YFANGVALSRDEDYVVVCE 225 (360)
Q Consensus 207 ----------------~~pngia~~~dg~~l~v~~ 225 (360)
....+++++|||+.|+++.
T Consensus 153 ~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 153 KIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp TEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred CeEcccccceeeeecccCcccEEECCCCCEEEEEE
Confidence 1125899999999887765
No 295
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.29 E-value=0.37 Score=48.80 Aligned_cols=72 Identities=14% Similarity=0.010 Sum_probs=47.9
Q ss_pred ccccEEEcCC--CcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE---EeCCCcCcceEEEecC--CCEEE
Q 018144 150 FANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL---VADGFYFANGVALSRD--EDYVV 222 (360)
Q Consensus 150 ~~n~l~~d~d--G~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~---~~~~l~~pngia~~~d--g~~l~ 222 (360)
.+..+++.++ |+..++ +...|.|..+|..+++... ..........++++++ ++.++
T Consensus 55 ~V~~l~~s~~~~~~~l~s-----------------~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~ 117 (753)
T 3jro_A 55 PVWRVDWAHPKFGTILAS-----------------CSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLL 117 (753)
T ss_dssp CEEEEEECCTTSCSEEEE-----------------EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred ceEEEEecCCCCCCEEEE-----------------EeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEE
Confidence 4677888776 776665 2335678888877775322 2223345678999998 87665
Q ss_pred EEeCCCCEEEEEEecCC
Q 018144 223 VCESWKFRCRKYWLKGE 239 (360)
Q Consensus 223 v~~t~~~~i~~~~~~g~ 239 (360)
.+. ..+.|..+++...
T Consensus 118 sgs-~dg~I~vwdl~~~ 133 (753)
T 3jro_A 118 VAS-SDGKVSVVEFKEN 133 (753)
T ss_dssp EEE-TTSEEEEEECCSS
T ss_pred EEe-CCCcEEEEEeecC
Confidence 555 4678999998654
No 296
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.24 E-value=1.2 Score=44.93 Aligned_cols=104 Identities=12% Similarity=0.101 Sum_probs=55.4
Q ss_pred cccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCC--e-EEEEeCCCcCcceEEEecCCCEEEEEeC
Q 018144 151 ANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN--I-TTLVADGFYFANGVALSRDEDYVVVCES 226 (360)
Q Consensus 151 ~n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg--~-~~~~~~~l~~pngia~~~dg~~l~v~~t 226 (360)
..++.+++||+ |.++-... ......|+.+|.+++ + .+.+.......... +++||+.+|+...
T Consensus 270 ~~~~~~SpDG~~l~~~~~~~-------------~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~ 335 (741)
T 1yr2_A 270 GHGASVSSDGRWVVITSSEG-------------TDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSG 335 (741)
T ss_dssp EEEEEECTTSCEEEEEEECT-------------TCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEEC
T ss_pred EEEEEECCCCCEEEEEEEcc-------------CCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEEC
Confidence 45678899995 44432110 002347888888766 5 55554433222223 4588888877754
Q ss_pred C---CCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEE
Q 018144 227 W---KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAI 270 (360)
Q Consensus 227 ~---~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~ 270 (360)
. +.+|+++++++.. ...+.+.........++..+ ++.+++..
T Consensus 336 ~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~~~-~~~lv~~~ 380 (741)
T 1yr2_A 336 DGAPLKKIVRVDLSGST-PRFDTVVPESKDNLESVGIA-GNRLFASY 380 (741)
T ss_dssp TTCTTCEEEEEECSSSS-CEEEEEECCCSSEEEEEEEE-BTEEEEEE
T ss_pred CCCCCCEEEEEeCCCCc-cccEEEecCCCCeEEEEEEE-CCEEEEEE
Confidence 2 4679999986532 22233322222222344555 44555544
No 297
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.04 E-value=0.78 Score=41.09 Aligned_cols=71 Identities=14% Similarity=0.124 Sum_probs=49.3
Q ss_pred ccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe-CCCcCcceEEEecCCCEEEEEeCCC
Q 018144 150 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCESWK 228 (360)
Q Consensus 150 ~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~-~~l~~pngia~~~dg~~l~v~~t~~ 228 (360)
.++.+++.++|.+.+|- ...+.|..+|..+++..... ......+.++++||++.++.+.. .
T Consensus 78 ~V~~~~~~~~~~~l~s~-----------------s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~-d 139 (343)
T 2xzm_R 78 FVSDLALSQENCFAISS-----------------SWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGA-E 139 (343)
T ss_dssp CEEEEEECSSTTEEEEE-----------------ETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEET-T
T ss_pred ceEEEEECCCCCEEEEE-----------------cCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcC-C
Confidence 46778888999877752 33577888898777654332 23345678999999996665554 5
Q ss_pred CEEEEEEecC
Q 018144 229 FRCRKYWLKG 238 (360)
Q Consensus 229 ~~i~~~~~~g 238 (360)
+.|..+++.+
T Consensus 140 ~~i~~wd~~~ 149 (343)
T 2xzm_R 140 REIKLWNILG 149 (343)
T ss_dssp SCEEEEESSS
T ss_pred CEEEEEeccC
Confidence 6788888753
No 298
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.99 E-value=0.73 Score=40.33 Aligned_cols=71 Identities=10% Similarity=-0.096 Sum_probs=45.1
Q ss_pred ccccEEEcC--CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCe----------EEEEeCCCcCcceEEEecC
Q 018144 150 FANDVVEAS--DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI----------TTLVADGFYFANGVALSRD 217 (360)
Q Consensus 150 ~~n~l~~d~--dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~----------~~~~~~~l~~pngia~~~d 217 (360)
.+..+++.+ +|.+.++ +...|.|..+|..+++ ...+.........++++++
T Consensus 59 ~v~~~~~~~~~d~~~l~s-----------------~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 121 (351)
T 3f3f_A 59 SIVAIDWASPEYGRIIAS-----------------ASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPA 121 (351)
T ss_dssp CEEEEEECCGGGCSEEEE-----------------EETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCG
T ss_pred cEEEEEEcCCCCCCEEEE-----------------EcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCC
Confidence 467788877 5776664 2234567777766542 2222223345678999999
Q ss_pred --CCEEEEEeCCCCEEEEEEecC
Q 018144 218 --EDYVVVCESWKFRCRKYWLKG 238 (360)
Q Consensus 218 --g~~l~v~~t~~~~i~~~~~~g 238 (360)
++.++.+. ..+.|..+++..
T Consensus 122 ~~~~~l~~~~-~dg~v~iwd~~~ 143 (351)
T 3f3f_A 122 HLGLKLACLG-NDGILRLYDALE 143 (351)
T ss_dssp GGCSEEEEEE-TTCEEEEEECSS
T ss_pred CCCcEEEEec-CCCcEEEecCCC
Confidence 88665555 457899898764
No 299
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=95.98 E-value=0.8 Score=40.73 Aligned_cols=117 Identities=8% Similarity=0.032 Sum_probs=61.6
Q ss_pred cEEEEc-CCC-e-EEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe
Q 018144 127 GLHKVS-EDG-V-ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA 203 (360)
Q Consensus 127 gl~~~~-~~g-~-~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~ 203 (360)
.++.++ .+| . +.+.. + .+..+++.+|| ++++-....-. . ...+...|+.+| +++.+.+.
T Consensus 153 ~l~~~d~~~~~~~~~l~~--~-----~~~~~~~spdg-~~~~~~~~~~~--~------~~~~~~~l~~~d--~~~~~~l~ 214 (347)
T 2gop_A 153 TFWIFDTESEEVIEEFEK--P-----RFSSGIWHRDK-IVVNVPHREII--P------QYFKFWDIYIWE--DGKEEKMF 214 (347)
T ss_dssp EEEEEETTTTEEEEEEEE--E-----TTCEEEEETTE-EEEEEECCCSS--C------CSSCCEEEEEEE--TTEEEEEE
T ss_pred eEEEEECCCCeEEeeecC--C-----CcccccCCCCe-EEEEEeccccc--c------cccccccEEEeC--CCceEEec
Confidence 466777 556 4 55532 1 35677889999 66653210000 0 000134789998 57776655
Q ss_pred CCCcCcceEEEecCCCEEEEEeCC-------CCEEEEEEecCCcCcceeeeccCCCCCCce-eEEcCCCCEEEEEe
Q 018144 204 DGFYFANGVALSRDEDYVVVCESW-------KFRCRKYWLKGERKGKLETFAENLPGAPDN-INLAPDGTFWIAII 271 (360)
Q Consensus 204 ~~l~~pngia~~~dg~~l~v~~t~-------~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~-i~~d~~G~lwva~~ 271 (360)
.. .. -..++|||+.++++... ...|+.++ .+ ....+.........+ +.++ +| +++...
T Consensus 215 ~~-~~--~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~----~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~ 280 (347)
T 2gop_A 215 EK-VS--FYAVDSDGERILLYGKPEKKYMSEHNKLYIYD-GK----EVMGILDEVDRGVGQAKIKD-GK-VYFTLF 280 (347)
T ss_dssp EE-ES--EEEEEECSSCEEEEECCSSSCCCSSCEEEEEC-SS----CEEESSTTCCSEEEEEEEET-TE-EEEEEE
T ss_pred cC-cc--eeeECCCCCEEEEEEccccCCccccceEEEEC-CC----ceEeccccCCcccCCccEEc-Cc-EEEEEe
Confidence 43 22 22348999877666532 35788887 32 222222122222333 6677 77 665543
No 300
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.96 E-value=0.78 Score=40.39 Aligned_cols=170 Identities=14% Similarity=0.118 Sum_probs=83.0
Q ss_pred CCcceEEEcCC-CCE-EEEecCCeEEEEE--CCe----------------eeEEEe-cCCe-EEEEeCCCcEEEEc-CCC
Q 018144 79 NHPEDASMDKN-GVI-YTATRDGWIKRLQ--DGT----------------WVNWKF-IDSH-LIICDNANGLHKVS-EDG 135 (360)
Q Consensus 79 ~~Pe~i~~d~~-G~l-~v~~~~G~I~~~~--~g~----------------~~~~~~-~~g~-L~v~~~~~gl~~~~-~~g 135 (360)
..-.+|++.++ +.+ ..++.||.|..++ +++ +..+.. ++|+ |..+..+..+...+ ..+
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~ 118 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 118 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeeccc
Confidence 34567888875 554 4566889887776 221 011111 2344 34444333344444 333
Q ss_pred -eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC-C-CcCcceE
Q 018144 136 -VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-G-FYFANGV 212 (360)
Q Consensus 136 -~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~-~-l~~pngi 212 (360)
......... .........+++...++ +...+.+..+|........... + ....+.+
T Consensus 119 ~~~~~~~~~~----~~~~~~~~~~~~~~l~s-----------------~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~ 177 (340)
T 4aow_A 119 TTTRRFVGHT----KDVLSVAFSSDNRQIVS-----------------GSRDKTIKLWNTLGVCKYTVQDESHSEWVSCV 177 (340)
T ss_dssp EEEEEEECCS----SCEEEEEECTTSSCEEE-----------------EETTSCEEEECTTSCEEEEECSSSCSSCEEEE
T ss_pred ceeeeecCCC----CceeEEEEeecCcccee-----------------ecCCCeEEEEEeCCCceEEEEeccccCcccce
Confidence 221111111 12334455666655553 2234566677765443322221 1 2334567
Q ss_pred EEecCCC-EEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 018144 213 ALSRDED-YVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 213 a~~~dg~-~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 272 (360)
++++++. .++++....+.|..++....+ ....+. ...+....++++++|++.++...
T Consensus 178 ~~~~~~~~~~~~s~~~d~~i~i~d~~~~~--~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~ 235 (340)
T 4aow_A 178 RFSPNSSNPIIVSCGWDKLVKVWNLANCK--LKTNHI-GHTGYLNTVTVSPDGSLCASGGK 235 (340)
T ss_dssp EECSCSSSCEEEEEETTSCEEEEETTTTE--EEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred EEccCCCCcEEEEEcCCCEEEEEECCCCc--eeeEec-CCCCcEEEEEECCCCCEEEEEeC
Confidence 7776643 244454445667777765322 112221 22334556888999987665443
No 301
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.78 E-value=1.2 Score=41.26 Aligned_cols=52 Identities=6% Similarity=-0.011 Sum_probs=30.2
Q ss_pred CccEEEEEcCCCCeEEEEeCC-CcCcceEEEecCCCEEEEEeCCCCEEEEEEecCC
Q 018144 185 PHGQLLKYDPSSNITTLVADG-FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGE 239 (360)
Q Consensus 185 ~~g~l~~~d~~tg~~~~~~~~-l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~ 239 (360)
..|.|..+|..+++......+ ......++++ ++.++.+. ..+.|..+++...
T Consensus 191 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s-~dg~i~vwd~~~~ 243 (435)
T 1p22_A 191 SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCS-KDRSIAVWDMASP 243 (435)
T ss_dssp TTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEE-TTSCEEEEECSSS
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEee-CCCcEEEEeCCCC
Confidence 356778888777765443322 2234455554 44455554 4567888887643
No 302
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.76 E-value=0.98 Score=39.98 Aligned_cols=83 Identities=23% Similarity=0.199 Sum_probs=43.0
Q ss_pred cceEEEcCCCCEE-EEecCCeEEEEE--CCee---e----------EEEe--c-CC-eEEEEeCCCcEEEEc-CCC-eEE
Q 018144 81 PEDASMDKNGVIY-TATRDGWIKRLQ--DGTW---V----------NWKF--I-DS-HLIICDNANGLHKVS-EDG-VEN 138 (360)
Q Consensus 81 Pe~i~~d~~G~l~-v~~~~G~I~~~~--~g~~---~----------~~~~--~-~g-~L~v~~~~~gl~~~~-~~g-~~~ 138 (360)
-.+++++++|... .++.||.|..++ +++. . .+.. + ++ .|..+..++-+...+ +++ .+.
T Consensus 16 V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~ 95 (316)
T 3bg1_A 16 IHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEK 95 (316)
T ss_dssp EEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCE
T ss_pred EEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceE
Confidence 3567888877654 445788777776 4431 1 1222 1 13 344444445555556 444 222
Q ss_pred EeeccCCccccccccEEEcCC--CcEEEE
Q 018144 139 FLSYVNGSKLRFANDVVEASD--GSLYFT 165 (360)
Q Consensus 139 l~~~~~~~~~~~~n~l~~d~d--G~l~vt 165 (360)
... ..+. ...++.+++.++ |.+.++
T Consensus 96 ~~~-~~~h-~~~V~~v~~~p~~~g~~las 122 (316)
T 3bg1_A 96 SHE-HAGH-DSSVNSVCWAPHDYGLILAC 122 (316)
T ss_dssp EEE-ECCC-SSCCCEEEECCTTTCSCEEE
T ss_pred EEE-ccCC-CCceEEEEECCCCCCcEEEE
Confidence 211 1111 135788888886 665554
No 303
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.41 E-value=1.4 Score=39.29 Aligned_cols=138 Identities=8% Similarity=-0.008 Sum_probs=72.4
Q ss_pred CcceEEEcCCCCEE-EEecCCeEEEEE-CC--------e-----------eeEEEe-cCCe-EEEEeCCCcEEEEc-C-C
Q 018144 80 HPEDASMDKNGVIY-TATRDGWIKRLQ-DG--------T-----------WVNWKF-IDSH-LIICDNANGLHKVS-E-D 134 (360)
Q Consensus 80 ~Pe~i~~d~~G~l~-v~~~~G~I~~~~-~g--------~-----------~~~~~~-~~g~-L~v~~~~~gl~~~~-~-~ 134 (360)
.-.++++.++|.+. .++.+|.|..++ .. + +..+.. ++|+ |..+..++-+..++ . .
T Consensus 60 ~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~ 139 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDES 139 (330)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTT
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCC
Confidence 35678888888755 455788777765 21 0 111111 2344 44444444455555 2 2
Q ss_pred C--eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEE--EeC-CCcCc
Q 018144 135 G--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL--VAD-GFYFA 209 (360)
Q Consensus 135 g--~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~--~~~-~l~~p 209 (360)
+ .+.+.. ..+. ...++.+++.++|.+.+|- ...+.|..+|..++..+. ... .....
T Consensus 140 ~~~~~~~~~-~~~h-~~~v~~v~~~p~~~~l~s~-----------------s~D~~i~iW~~~~~~~~~~~~~~~h~~~v 200 (330)
T 2hes_X 140 GEEYECISV-LQEH-SQDVKHVIWHPSEALLASS-----------------SYDDTVRIWKDYDDDWECVAVLNGHEGTV 200 (330)
T ss_dssp CCCCEEEEE-ECCC-SSCEEEEEECSSSSEEEEE-----------------ETTSCEEEEEEETTEEEEEEEECCCSSCE
T ss_pred CCCeEEEEE-eccC-CCceEEEEECCCCCEEEEE-----------------cCCCeEEEEECCCCCeeEEEEccCCCCcE
Confidence 2 222211 1111 1346788999999877763 234556666654443222 222 23345
Q ss_pred ceEEEecC--CCEEEEEeCCCCEEEEEEec
Q 018144 210 NGVALSRD--EDYVVVCESWKFRCRKYWLK 237 (360)
Q Consensus 210 ngia~~~d--g~~l~v~~t~~~~i~~~~~~ 237 (360)
..++++++ +..+ ++....+.|..+++.
T Consensus 201 ~~~~~~~~~~~~~l-~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 201 WSSDFDKTEGVFRL-CSGSDDSTVRVWKYM 229 (330)
T ss_dssp EEEEECCSSSSCEE-EEEETTSCEEEEEEE
T ss_pred EEEEecCCCCeeEE-EEEeCCCeEEEEEec
Confidence 78899998 5434 444445567767664
No 304
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=95.07 E-value=0.18 Score=47.55 Aligned_cols=102 Identities=7% Similarity=-0.064 Sum_probs=57.4
Q ss_pred ccccEEEcCCCcEEE----EeCCCCCCCccceecccccCCccEEEEEcCCCC-----eE------EEEeC-CCcCcceEE
Q 018144 150 FANDVVEASDGSLYF----TVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-----IT------TLVAD-GFYFANGVA 213 (360)
Q Consensus 150 ~~n~l~~d~dG~l~v----td~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg-----~~------~~~~~-~l~~pngia 213 (360)
.++.++++++|+..+ + +...+.|..+|..++ +. ..... .......++
T Consensus 94 ~v~~l~~spdg~~lav~~~s-----------------gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 156 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMS-----------------SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMK 156 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEE-----------------TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEE
T ss_pred cccEEEEcCCCCEEEEEEec-----------------cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEE
Confidence 467889999997544 3 223456777765432 10 11111 133567899
Q ss_pred EecC-CCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC-EEEEEec
Q 018144 214 LSRD-EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIK 272 (360)
Q Consensus 214 ~~~d-g~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~ 272 (360)
++|+ ++ ++++.+..+.|..+|+..... ..... ........++++++|+ |.++...
T Consensus 157 ~~p~~~~-~las~s~Dg~v~iwD~~~~~~--~~~~~-~~~~~v~~v~wspdg~~lasgs~d 213 (434)
T 2oit_A 157 WNPTVPS-MVAVCLADGSIAVLQVTETVK--VCATL-PSTVAVTSVCWSPKGKQLAVGKQN 213 (434)
T ss_dssp ECSSCTT-EEEEEETTSCEEEEEESSSEE--EEEEE-CGGGCEEEEEECTTSSCEEEEETT
T ss_pred ECCCCCC-EEEEEECCCeEEEEEcCCCcc--eeecc-CCCCceeEEEEcCCCCEEEEEcCC
Confidence 9998 55 555555567788888864311 11111 1122456788898886 4445433
No 305
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=94.87 E-value=1.9 Score=38.08 Aligned_cols=71 Identities=20% Similarity=0.145 Sum_probs=50.8
Q ss_pred ccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEE--ecCCCEEEEEeCC
Q 018144 150 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVAL--SRDEDYVVVCESW 227 (360)
Q Consensus 150 ~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~--~~dg~~l~v~~t~ 227 (360)
.+..+++.++|...++ +...|.|..+|..+++.............+++ +++++.++.+. .
T Consensus 88 ~v~~~~~~~~~~~l~s-----------------~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~ 149 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFT-----------------ASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGS-W 149 (368)
T ss_dssp CEEEEEECTTSSEEEE-----------------EETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEE-T
T ss_pred CEEEEEECcCCCEEEE-----------------EcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEcc-C
Confidence 4778899999986664 22357889999888877665444455678898 88887555554 4
Q ss_pred CCEEEEEEecC
Q 018144 228 KFRCRKYWLKG 238 (360)
Q Consensus 228 ~~~i~~~~~~g 238 (360)
.+.|..+++..
T Consensus 150 dg~i~vwd~~~ 160 (368)
T 3mmy_A 150 DKTLKFWDTRS 160 (368)
T ss_dssp TSEEEEECSSC
T ss_pred CCcEEEEECCC
Confidence 57788888754
No 306
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.78 E-value=1.8 Score=37.45 Aligned_cols=216 Identities=11% Similarity=-0.022 Sum_probs=107.9
Q ss_pred ceEEEcCCCCEE-EEecCCeEEEEE--CCeeeE-E----------EecCCeEEEEeCCCcEEEEc-CCC---eEEEeecc
Q 018144 82 EDASMDKNGVIY-TATRDGWIKRLQ--DGTWVN-W----------KFIDSHLIICDNANGLHKVS-EDG---VENFLSYV 143 (360)
Q Consensus 82 e~i~~d~~G~l~-v~~~~G~I~~~~--~g~~~~-~----------~~~~g~L~v~~~~~gl~~~~-~~g---~~~l~~~~ 143 (360)
.++++.++|... +|+.+|.|..++ +++... + ...+..+..+.....+...+ ..+ ...+. ..
T Consensus 71 ~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~-~~ 149 (318)
T 4ggc_A 71 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLS-GH 149 (318)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEE-CC
T ss_pred EEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEc-Cc
Confidence 578888887654 556889888888 554321 1 11122233333333233333 332 22221 11
Q ss_pred CCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEE-----EEeCCCcCcceEEEecCC
Q 018144 144 NGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT-----LVADGFYFANGVALSRDE 218 (360)
Q Consensus 144 ~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~-----~~~~~l~~pngia~~~dg 218 (360)
......+...++|+..++- ...+.|..+|..+++.. ...........+++.+++
T Consensus 150 ----~~~~~~~~~~~~~~~l~s~-----------------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 208 (318)
T 4ggc_A 150 ----SQEVCGLRWAPDGRHLASG-----------------GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQ 208 (318)
T ss_dssp ----SSCEEEEEECTTSSEEEEE-----------------ETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTS
T ss_pred ----cCceEEEEEcCCCCEEEEE-----------------ecCcceeEEECCCCcccccceeeecccCCceEEEEecCCC
Confidence 1235566777888766652 23466777777654321 111122234567777765
Q ss_pred CEEE-EEe-CCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCc
Q 018144 219 DYVV-VCE-SWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 296 (360)
Q Consensus 219 ~~l~-v~~-t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~ 296 (360)
..++ ++. ...+.|..++..... ..... ........+.+.++++..+...+.
T Consensus 209 ~~~~~~~~~~~~~~i~lwd~~~~~--~~~~~--~~~~~v~~~~~~~~~~~~~~~sg~----------------------- 261 (318)
T 4ggc_A 209 SNVLATGGGTSDRHIRIWNVCSGA--CLSAV--DAHSQVCSILWSPHYKELISGHGF----------------------- 261 (318)
T ss_dssp TTEEEEEECTTTCEEEEEETTTCC--EEEEE--ECSSCEEEEEEETTTTEEEEEECT-----------------------
T ss_pred CcEEEEEecCCCCEEEEEeccccc--ccccc--cceeeeeeeeecccccceEEEEEc-----------------------
Confidence 4343 333 333455555543321 11111 111223455666767654433321
Q ss_pred cccccccCCCceEEEEEC-CCCcEEEEEeCCCCCcccceeeEEEE-CCEEEEEeCCCCeEEEEeC
Q 018144 297 LFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 359 (360)
Q Consensus 297 ~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~Lylgs~~~~~i~~~~l 359 (360)
..+.|..+| .+++.+..+.... ..++++... +|.+.+..-....|...++
T Consensus 262 ---------~d~~i~iwd~~~~~~~~~l~gH~----~~V~~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 262 ---------AQNQLVIWKYPTMAKVAELKGHT----SRVLSLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp ---------TTCCEEEEETTTCCEEEEECCCS----SCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred ---------CCCEEEEEECCCCcEEEEEcCCC----CCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 024566667 4678887775433 357777776 4554444445566766654
No 307
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=94.70 E-value=2 Score=44.39 Aligned_cols=97 Identities=13% Similarity=0.083 Sum_probs=61.7
Q ss_pred ccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCCCC
Q 018144 150 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKF 229 (360)
Q Consensus 150 ~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~~~ 229 (360)
.+..++++++|.+.++ +...|.|..+|..+++.......-.....+++++ |+.|+.+ ...+
T Consensus 19 ~V~~lafspdg~~lAs-----------------gs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~-s~D~ 79 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAI-----------------ATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVI-NAKD 79 (902)
T ss_dssp CEEEEEEETTTTEEEE-----------------EETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEE-ETTC
T ss_pred CcEEEEECCCCCEEEE-----------------EeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEE-ECcC
Confidence 4678999999987775 3346788889887666544333333467899999 7745444 4567
Q ss_pred EEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEE
Q 018144 230 RCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIA 269 (360)
Q Consensus 230 ~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva 269 (360)
.|..++++..+ ....+. .++....++++++|++.+.
T Consensus 80 ~v~lWd~~~~~--~~~~~~--~~~~V~~v~~sp~g~~l~s 115 (902)
T 2oaj_A 80 TVYVLSLYSQK--VLTTVF--VPGKITSIDTDASLDWMLI 115 (902)
T ss_dssp EEEEEETTTCS--EEEEEE--CSSCEEEEECCTTCSEEEE
T ss_pred eEEEEECCCCc--EEEEEc--CCCCEEEEEECCCCCEEEE
Confidence 88888875432 122221 2234556778888874443
No 308
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=94.57 E-value=2.1 Score=37.26 Aligned_cols=164 Identities=15% Similarity=0.102 Sum_probs=80.3
Q ss_pred CcceEEEcCCCCEE-EEecCCeEEEEE-CC---e-----------eeEEEe--c-CCe-EEEEeCCCcEEEEc-CCC-eE
Q 018144 80 HPEDASMDKNGVIY-TATRDGWIKRLQ-DG---T-----------WVNWKF--I-DSH-LIICDNANGLHKVS-EDG-VE 137 (360)
Q Consensus 80 ~Pe~i~~d~~G~l~-v~~~~G~I~~~~-~g---~-----------~~~~~~--~-~g~-L~v~~~~~gl~~~~-~~g-~~ 137 (360)
.-.+++++++|... .++.+|.|..++ ++ + +..+.. + .++ |..+..++-+...+ .++ ..
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~ 90 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWS 90 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBC
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceE
Confidence 34577888888655 445788887777 32 1 111222 1 133 33344334344445 333 21
Q ss_pred EEeeccCCccccccccEEEcCC--CcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCe---EEEEeCCCcCcceE
Q 018144 138 NFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI---TTLVADGFYFANGV 212 (360)
Q Consensus 138 ~l~~~~~~~~~~~~n~l~~d~d--G~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~---~~~~~~~l~~pngi 212 (360)
.+.. ..+. ...++.+++.++ |.+.++ +...+.|..+|..++. ...+.......+.+
T Consensus 91 ~~~~-~~~h-~~~v~~v~~~p~~~g~~l~s-----------------~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~ 151 (297)
T 2pm7_B 91 QIAV-HAVH-SASVNSVQWAPHEYGPMLLV-----------------ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSA 151 (297)
T ss_dssp CCEE-ECCC-SSCEEEEEECCGGGCSEEEE-----------------EETTSEEEEEEBCSSSCBCCEEEECCSSCEEEE
T ss_pred EEEE-eecC-CCceeEEEeCcCCCCcEEEE-----------------EECCCcEEEEEecCCCceeeeeeecccCccceE
Confidence 1111 0111 124677888876 666554 2235667777765432 12222222345677
Q ss_pred EEecC-------------CCEEEEEeCCCCEEEEEEecCCcCc--ceeeeccCCCCCCceeEEcCCC
Q 018144 213 ALSRD-------------EDYVVVCESWKFRCRKYWLKGERKG--KLETFAENLPGAPDNINLAPDG 264 (360)
Q Consensus 213 a~~~d-------------g~~l~v~~t~~~~i~~~~~~g~~~~--~~~~~~~~~~g~pd~i~~d~~G 264 (360)
+++|+ ++ ++++....+.|..++.+..... ....+. ........+++.++|
T Consensus 152 ~~~p~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-~H~~~V~~v~~sp~~ 216 (297)
T 2pm7_B 152 SWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTV 216 (297)
T ss_dssp EECCCC------------CC-EEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCC
T ss_pred eecCCcccccccCCCCCCcc-eEEEEcCCCcEEEEEEcCCCceEEEEEEec-CCCCceEEEEECCCC
Confidence 88876 34 4444444567777777542211 111121 122234567777775
No 309
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.48 E-value=1.4 Score=44.49 Aligned_cols=104 Identities=14% Similarity=0.068 Sum_probs=58.1
Q ss_pred cccEEEc-CCCc-EEEE-eCCCCCCCccceecccccCCccEEEEEcCCCC-eEEEEeCCCc-CcceEEEecCCCEEEEEe
Q 018144 151 ANDVVEA-SDGS-LYFT-VSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-ITTLVADGFY-FANGVALSRDEDYVVVCE 225 (360)
Q Consensus 151 ~n~l~~d-~dG~-l~vt-d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg-~~~~~~~~l~-~pngia~~~dg~~l~v~~ 225 (360)
.....++ +||+ |.++ |.. +.....|+.+|.++| +. +...+. ...++++++||+.++++.
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~--------------G~~~~~l~v~dl~~g~~~--l~~~~~~~~~~~~WspDg~~l~y~~ 239 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMS--------------GNEVYTIEFKRISDPSQT--IADKVSGTNGEIVWGPDHTSLFYVT 239 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESS--------------SSSCEEEEEEETTCTTCC--CCCCEEEECSCCEECSSTTEEEEEE
T ss_pred EeeeEecCCCCCEEEEEEeCC--------------CCceEEEEEEECCCCCEe--CCccccCceeeEEEecCCCEEEEEE
Confidence 4456889 9996 4443 322 222346999999887 52 111111 135789999998777765
Q ss_pred CCC----CEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCC-EEEEE
Q 018144 226 SWK----FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAI 270 (360)
Q Consensus 226 t~~----~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~ 270 (360)
... .+|+++++.+.......++......+-.++.+++||. |.+..
T Consensus 240 ~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~ 289 (751)
T 2xe4_A 240 KDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGS 289 (751)
T ss_dssp ECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEE
T ss_pred ECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEe
Confidence 421 3688888765432223333322222333566788886 44433
No 310
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=94.24 E-value=1.5 Score=42.92 Aligned_cols=111 Identities=10% Similarity=0.035 Sum_probs=60.3
Q ss_pred CcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCC---CCCCceeEEcCCCC-EEEEEecCchhHHHHhhc
Q 018144 208 FANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENL---PGAPDNINLAPDGT-FWIAIIKLDARRMKILNS 283 (360)
Q Consensus 208 ~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~---~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~ 283 (360)
....++++|||+.+-++. ..+.|..++.++ ....+.... ......+++.+||. |.++...
T Consensus 87 ~V~~vawSPdG~~LAs~s-~dg~V~iwd~~~----~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~D----------- 150 (588)
T 2j04_A 87 YPRVCKPSPIDDWMAVLS-NNGNVSVFKDNK----MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNED----------- 150 (588)
T ss_dssp CEEEEEECSSSSCEEEEE-TTSCEEEEETTE----EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETT-----------
T ss_pred cEEEEEECCCCCEEEEEe-CCCcEEEEeCCc----eeeeccCCCccccccEEEEEEcCCCCEEEEEcCC-----------
Confidence 457899999998555544 456677776432 112221010 01245788999996 5555443
Q ss_pred chhHHHHHHhCCccccccccCCCceEEEEECCCCc--------EEEEEeCCCCCcccceeeEEEECCEEEEEeCCCCeEE
Q 018144 284 SKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGT--------IIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIG 355 (360)
Q Consensus 284 ~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~--------~~~~~~~~~g~~~~~~t~~~~~~g~Lylgs~~~~~i~ 355 (360)
+.|..++.+++ .+..+....+...+.+..+....+. .+++-.++.+.
T Consensus 151 ------------------------GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVr 205 (588)
T 2j04_A 151 ------------------------GELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVF 205 (588)
T ss_dssp ------------------------SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEE
T ss_pred ------------------------CEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEE
Confidence 45666665433 2445432221123567777776533 44444566666
Q ss_pred EEeC
Q 018144 356 KVQL 359 (360)
Q Consensus 356 ~~~l 359 (360)
.+++
T Consensus 206 lWd~ 209 (588)
T 2j04_A 206 SMTV 209 (588)
T ss_dssp EECC
T ss_pred EEEC
Confidence 5544
No 311
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=93.85 E-value=0.038 Score=51.03 Aligned_cols=50 Identities=10% Similarity=-0.080 Sum_probs=27.5
Q ss_pred ccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEec
Q 018144 186 HGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLK 237 (360)
Q Consensus 186 ~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~ 237 (360)
.|.|+.+|.++|+....... .......+..++. +|++.+..+.|+.++.+
T Consensus 18 dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~ 67 (369)
T 2hz6_A 18 DGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSK 67 (369)
T ss_dssp TSEEEEEETTTCCEEEEEEC-CCSCCCC-----C-CEEECTTTCCEEEC---
T ss_pred CCEEEEEECCCCCEEEEecC-CCceecceEcCCC-EEEEeCCCCEEEEEECC
Confidence 57899999988987643332 2222233344554 66766667789999874
No 312
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.78 E-value=1.8 Score=41.86 Aligned_cols=164 Identities=12% Similarity=0.040 Sum_probs=84.9
Q ss_pred CcceEEEcCC------C-CEEEEecCCeEEEEE--CCe----------------------eeEEEe-cCCeEEEEeCCCc
Q 018144 80 HPEDASMDKN------G-VIYTATRDGWIKRLQ--DGT----------------------WVNWKF-IDSHLIICDNANG 127 (360)
Q Consensus 80 ~Pe~i~~d~~------G-~l~v~~~~G~I~~~~--~g~----------------------~~~~~~-~~g~L~v~~~~~g 127 (360)
...++++.++ + .|-.++.+|.|..++ +++ +..+.. .++.|..+..++-
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~Dgt 288 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGF 288 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSE
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCE
Confidence 3456777664 3 344456888887777 331 111222 2345555554444
Q ss_pred EEEEc-CCC---eEEEeeccCCccccccccE--EEcCCC-cEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEE
Q 018144 128 LHKVS-EDG---VENFLSYVNGSKLRFANDV--VEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT 200 (360)
Q Consensus 128 l~~~~-~~g---~~~l~~~~~~~~~~~~n~l--~~d~dG-~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~ 200 (360)
+..++ .++ ...+. ... ..+++| +..++| ++.+|- ..++.|..+|..+++..
T Consensus 289 V~lWD~~~~~~~~~~~~-~H~----~~V~sv~~~~s~~g~~~laS~-----------------S~D~tvklWD~~~~~~~ 346 (524)
T 2j04_B 289 VAEFDLTDPEVPSFYDQ-VHD----SYILSVSTAYSDFEDTVVSTV-----------------AVDGYFYIFNPKDIATT 346 (524)
T ss_dssp EEEEETTBCSSCSEEEE-CSS----SCEEEEEEECCTTSCCEEEEE-----------------ETTSEEEEECGGGHHHH
T ss_pred EEEEECCCCCCceEEee-ccc----ccEEEEEEEcCCCCCeEEEEe-----------------ccCCeEEEEECCCCCcc
Confidence 55555 433 22221 111 235666 346677 776752 33567888887554321
Q ss_pred E-EeCCC--cCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCEEEE
Q 018144 201 L-VADGF--YFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIA 269 (360)
Q Consensus 201 ~-~~~~l--~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva 269 (360)
. +.... .....++++|+++. +++....+.|..+++..... ...+. ...+....+++.++|.+.++
T Consensus 347 ~~~~~~~~~~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~~~--~~~l~-gH~~~V~sva~Sp~g~~l~S 414 (524)
T 2j04_B 347 KTTVSRFRGSNLVPVVYCPQIYS-YIYSDGASSLRAVPSRAAFA--VHPLV-SRETTITAIGVSRLHPMVLA 414 (524)
T ss_dssp CEEEEECSCCSCCCEEEETTTTE-EEEECSSSEEEEEETTCTTC--CEEEE-ECSSCEEEEECCSSCCBCEE
T ss_pred cccccccccCcccceEeCCCcCe-EEEeCCCCcEEEEECccccc--ceeee-cCCCceEEEEeCCCCCeEEE
Confidence 1 11111 12467999999985 55555566777777643221 11222 12233456677777764443
No 313
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=93.71 E-value=1 Score=45.38 Aligned_cols=77 Identities=10% Similarity=-0.110 Sum_probs=47.8
Q ss_pred ccEEEcCCCc-EEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCCCCE
Q 018144 152 NDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFR 230 (360)
Q Consensus 152 n~l~~d~dG~-l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~~~~ 230 (360)
+++.+++||+ |.++.... .+......+.++.+|.++++.+.+..........+++|||+.|..+. .+.
T Consensus 65 ~~~~~Spdg~~l~~~~~~~---------~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~--~~~ 133 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYV---------KQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW--NND 133 (740)
T ss_dssp CEEEECTTSSEEEEEEEEE---------ECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE--TTE
T ss_pred cceEECCCCCEEEEEECCe---------eeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE--CCe
Confidence 4578899996 44432110 00001223678899999888765443333456789999998776664 357
Q ss_pred EEEEEecCC
Q 018144 231 CRKYWLKGE 239 (360)
Q Consensus 231 i~~~~~~g~ 239 (360)
|+.++.++.
T Consensus 134 i~~~~~~~~ 142 (740)
T 4a5s_A 134 IYVKIEPNL 142 (740)
T ss_dssp EEEESSTTS
T ss_pred EEEEECCCC
Confidence 888877653
No 314
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=93.35 E-value=1.2 Score=40.12 Aligned_cols=72 Identities=10% Similarity=0.007 Sum_probs=50.4
Q ss_pred ccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccE-EEEEcCCCCeEEEEeC---CCcCcceEEEecCCCEEEEEe
Q 018144 150 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQ-LLKYDPSSNITTLVAD---GFYFANGVALSRDEDYVVVCE 225 (360)
Q Consensus 150 ~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~-l~~~d~~tg~~~~~~~---~l~~pngia~~~dg~~l~v~~ 225 (360)
.+..++++++|++.+| +...+. |..+|..+++...... .....+.++++||++.+..+.
T Consensus 197 ~v~~~~~s~~g~~l~s-----------------~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s 259 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVAT-----------------CSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVS 259 (355)
T ss_dssp CEEEEEECTTSSEEEE-----------------EETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEE
T ss_pred ceEEEEECCCCCEEEE-----------------EeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEE
Confidence 4678899999987775 234566 8888988776544332 234567899999998665554
Q ss_pred CCCCEEEEEEecCC
Q 018144 226 SWKFRCRKYWLKGE 239 (360)
Q Consensus 226 t~~~~i~~~~~~g~ 239 (360)
..+.|..++++..
T Consensus 260 -~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 260 -DKWTLHVFEIFND 272 (355)
T ss_dssp -TTCEEEEEESSCC
T ss_pred -CCCEEEEEEccCC
Confidence 4578888887643
No 315
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=92.84 E-value=4.3 Score=40.14 Aligned_cols=56 Identities=16% Similarity=0.144 Sum_probs=34.2
Q ss_pred EEEcCCCCEEEEe--cCCeEEEEE--CCeeeEE------------Ee-cCCeEEEEeC-C------CcEEEEc-CCC-eE
Q 018144 84 ASMDKNGVIYTAT--RDGWIKRLQ--DGTWVNW------------KF-IDSHLIICDN-A------NGLHKVS-EDG-VE 137 (360)
Q Consensus 84 i~~d~~G~l~v~~--~~G~I~~~~--~g~~~~~------------~~-~~g~L~v~~~-~------~gl~~~~-~~g-~~ 137 (360)
+++..+|.||+.. .+..+.++| +++++.. .. .+|+|||... . ..+.++| .++ .+
T Consensus 248 ~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT 327 (656)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred ccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce
Confidence 5556688999865 345789998 5554432 12 3788888654 1 2366677 455 44
Q ss_pred EE
Q 018144 138 NF 139 (360)
Q Consensus 138 ~l 139 (360)
.+
T Consensus 328 ~~ 329 (656)
T 1k3i_A 328 SL 329 (656)
T ss_dssp EE
T ss_pred eC
Confidence 44
No 316
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.58 E-value=0.4 Score=43.62 Aligned_cols=96 Identities=13% Similarity=0.273 Sum_probs=56.8
Q ss_pred CCCEEEEecCCeEEEEE--CCeeeEEEe-----------------cCCeEEEEe--CCCcEEEEc-CCCeEEEeeccC--
Q 018144 89 NGVIYTATRDGWIKRLQ--DGTWVNWKF-----------------IDSHLIICD--NANGLHKVS-EDGVENFLSYVN-- 144 (360)
Q Consensus 89 ~G~l~v~~~~G~I~~~~--~g~~~~~~~-----------------~~g~L~v~~--~~~gl~~~~-~~g~~~l~~~~~-- 144 (360)
+|.+|+++.+|.|+.+| +|+.. |.. .++.+|+.. .+..|+.++ .+|.+.+.....
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~-W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHII-WSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEE-EEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEE-EEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 56889999999999999 67532 221 134677764 345688888 667332321111
Q ss_pred --CccccccccEEE------cCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEe
Q 018144 145 --GSKLRFANDVVE------ASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA 203 (360)
Q Consensus 145 --~~~~~~~n~l~~------d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~ 203 (360)
..++..-....+ +.+|.+|+ +...|+++.+|..||+.....
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~------------------Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYT------------------GSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEE------------------CEEEEEEEEEETTTCCEEEEE
T ss_pred eeccccccCCCceeecccccccCCEEEE------------------EecCCEEEEEECCCCcEEEEE
Confidence 111111111122 25778888 455789999999999886543
No 317
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=92.19 E-value=5.7 Score=34.86 Aligned_cols=71 Identities=13% Similarity=0.004 Sum_probs=43.7
Q ss_pred ccccEEEcC--CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEE---EEeCCCcCcceEEEecC--CCEEE
Q 018144 150 FANDVVEAS--DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT---LVADGFYFANGVALSRD--EDYVV 222 (360)
Q Consensus 150 ~~n~l~~d~--dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~---~~~~~l~~pngia~~~d--g~~l~ 222 (360)
.+..+++.+ +|++.+| +...+.|..+|..+++.. .+.......+.++++|+ +. ++
T Consensus 59 ~V~~v~~~~~~~~~~l~s-----------------~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~-~l 120 (316)
T 3bg1_A 59 PVWQVAWAHPMYGNILAS-----------------CSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGL-IL 120 (316)
T ss_dssp CEEEEEECCGGGSSCEEE-----------------EETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCS-CE
T ss_pred cEEEEEeCCCCCCCEEEE-----------------EECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCc-EE
Confidence 466777754 4666664 223567888888766422 22222345789999997 55 44
Q ss_pred EEeCCCCEEEEEEecC
Q 018144 223 VCESWKFRCRKYWLKG 238 (360)
Q Consensus 223 v~~t~~~~i~~~~~~g 238 (360)
++.+..+.|..++...
T Consensus 121 asgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 121 ACGSSDGAISLLTYTG 136 (316)
T ss_dssp EEECSSSCEEEEEECS
T ss_pred EEEcCCCCEEEEecCC
Confidence 5555566788777754
No 318
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=91.39 E-value=6.6 Score=34.01 Aligned_cols=71 Identities=13% Similarity=-0.003 Sum_probs=44.2
Q ss_pred ccccEEEcC--CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEE---EEeCCCcCcceEEEecC--CCEEE
Q 018144 150 FANDVVEAS--DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT---LVADGFYFANGVALSRD--EDYVV 222 (360)
Q Consensus 150 ~~n~l~~d~--dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~---~~~~~l~~pngia~~~d--g~~l~ 222 (360)
.++.+++.+ +|++.+| +..++.|..+|..+++.. .+.......+.++++|+ +..+.
T Consensus 55 ~V~~v~~s~~~~g~~l~s-----------------~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~ 117 (297)
T 2pm7_B 55 PVWRVDWAHPKFGTILAS-----------------CSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLL 117 (297)
T ss_dssp CEEEEEECCGGGCSEEEE-----------------EETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred CeEEEEecCCCcCCEEEE-----------------EcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEE
Confidence 456777754 4777665 233567888887766422 22222335678999987 76555
Q ss_pred EEeCCCCEEEEEEecC
Q 018144 223 VCESWKFRCRKYWLKG 238 (360)
Q Consensus 223 v~~t~~~~i~~~~~~g 238 (360)
.+. ..+.|..+++..
T Consensus 118 s~s-~d~~v~~wd~~~ 132 (297)
T 2pm7_B 118 VAS-SDGKVSVVEFKE 132 (297)
T ss_dssp EEE-TTSEEEEEEBCS
T ss_pred EEE-CCCcEEEEEecC
Confidence 444 467888888754
No 319
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=90.73 E-value=4.7 Score=37.61 Aligned_cols=72 Identities=10% Similarity=0.003 Sum_probs=49.1
Q ss_pred cccccEEEcCC-CcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC-CcCcceEEEecCCCEEEEEeC
Q 018144 149 RFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVALSRDEDYVVVCES 226 (360)
Q Consensus 149 ~~~n~l~~d~d-G~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~-l~~pngia~~~dg~~l~v~~t 226 (360)
..+.++++.++ ++++++- ...|.|..+|..+++......+ ....+.++++++|+.|+++..
T Consensus 150 ~~V~~v~~~p~~~~~las~-----------------s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~ 212 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVAVC-----------------LADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQ 212 (434)
T ss_dssp GSEEEEEECSSCTTEEEEE-----------------ETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEET
T ss_pred CceEEEEECCCCCCEEEEE-----------------ECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcC
Confidence 35778899987 6777752 2356788888876644322222 345788999999997776664
Q ss_pred CCCEEEEEEecC
Q 018144 227 WKFRCRKYWLKG 238 (360)
Q Consensus 227 ~~~~i~~~~~~g 238 (360)
.+.|..|+.++
T Consensus 213 -dg~v~iwd~~~ 223 (434)
T 2oit_A 213 -NGTVVQYLPTL 223 (434)
T ss_dssp -TSCEEEECTTC
T ss_pred -CCcEEEEccCC
Confidence 56788888753
No 320
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=89.44 E-value=12 Score=34.06 Aligned_cols=130 Identities=8% Similarity=0.027 Sum_probs=67.2
Q ss_pred eEEEcCCCCEEEEecCCeEEEEE--CCeeeE-------------EEe-cCC-eEEEEeCCCcEEEEc-CCC--eEEEeec
Q 018144 83 DASMDKNGVIYTATRDGWIKRLQ--DGTWVN-------------WKF-IDS-HLIICDNANGLHKVS-EDG--VENFLSY 142 (360)
Q Consensus 83 ~i~~d~~G~l~v~~~~G~I~~~~--~g~~~~-------------~~~-~~g-~L~v~~~~~gl~~~~-~~g--~~~l~~~ 142 (360)
.|.+.+++.|-+|. ++.|+.++ +|+... +.. ++| .|.++..++.+..++ .++ +..+ ..
T Consensus 110 ~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~-~~ 187 (420)
T 4gga_A 110 LVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM-TS 187 (420)
T ss_dssp CEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-CC
T ss_pred eEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE-eC
Confidence 35555555444544 67787777 554322 221 233 355555555566666 555 3322 11
Q ss_pred cCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCe--EEEEeCCCcCcceEEEecCCCE
Q 018144 143 VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI--TTLVADGFYFANGVALSRDEDY 220 (360)
Q Consensus 143 ~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~--~~~~~~~l~~pngia~~~dg~~ 220 (360)
.. ..+.. +..++.+.++ +...+.+..+|..+.. +..+........++.++++++.
T Consensus 188 h~----~~v~~--~s~~~~~l~s-----------------gs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~ 244 (420)
T 4gga_A 188 HS----ARVGS--LSWNSYILSS-----------------GSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH 244 (420)
T ss_dssp CS----SCEEE--EEEETTEEEE-----------------EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE
T ss_pred CC----CceEE--EeeCCCEEEE-----------------EeCCCceeEeeecccceeeEEecccccceeeeeecCCCCe
Confidence 11 11223 3334555554 2234566666654332 2223333455678899999986
Q ss_pred EEEEeCCCCEEEEEEecC
Q 018144 221 VVVCESWKFRCRKYWLKG 238 (360)
Q Consensus 221 l~v~~t~~~~i~~~~~~g 238 (360)
+..+. ..+.+..++...
T Consensus 245 l~s~~-~D~~v~i~~~~~ 261 (420)
T 4gga_A 245 LASGG-NDNLVNVWPSAP 261 (420)
T ss_dssp EEEEE-TTSCEEEEESSC
T ss_pred eeeee-ccccceEEeecc
Confidence 65554 456677777653
No 321
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=87.22 E-value=17 Score=33.01 Aligned_cols=55 Identities=5% Similarity=-0.156 Sum_probs=34.9
Q ss_pred cccEEEcC---CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC----CcCcceEEEecCCCEEE
Q 018144 151 ANDVVEAS---DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG----FYFANGVALSRDEDYVV 222 (360)
Q Consensus 151 ~n~l~~d~---dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~----l~~pngia~~~dg~~l~ 222 (360)
...+++.+ +|.+.++- ..++.|..+|.++|+......+ ......++++|||+.+.
T Consensus 181 v~~l~fs~~~g~~~~LaSg-----------------S~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lv 242 (356)
T 2w18_A 181 ETILTFAEVQGMQEALLGT-----------------TIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFI 242 (356)
T ss_dssp SCEEEEEEEETSTTEEEEE-----------------ETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEE
T ss_pred eeeEEeeccCCCCceEEEe-----------------cCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEE
Confidence 34555555 67888863 3467788899998876443322 22345668999997553
No 322
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=86.89 E-value=12 Score=33.91 Aligned_cols=53 Identities=9% Similarity=-0.007 Sum_probs=35.0
Q ss_pred CCccEEEEEcCCCCeEEEE-eCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecC
Q 018144 184 KPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG 238 (360)
Q Consensus 184 ~~~g~l~~~d~~tg~~~~~-~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g 238 (360)
...|.|..+|..+++.... .......+.++++|||+.|-++.. +++..+.+.|
T Consensus 336 s~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~--~Gv~lvrL~g 389 (393)
T 4gq1_A 336 SQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATE--GSVLLTRLMG 389 (393)
T ss_dssp TTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEES--SEEEEEEEGG
T ss_pred CCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeC--CCeEEEEEeC
Confidence 3467888899877655332 222334678999999997766653 4576666543
No 323
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=84.42 E-value=3.6 Score=37.27 Aligned_cols=105 Identities=13% Similarity=0.093 Sum_probs=56.8
Q ss_pred CCccEEEEEcCCCCeEEEEeCCCc-CcceEEEe----cCCCEEEEEe-CCCCEEEEEEecCCcCcceeeeccCC-CCCCc
Q 018144 184 KPHGQLLKYDPSSNITTLVADGFY-FANGVALS----RDEDYVVVCE-SWKFRCRKYWLKGERKGKLETFAENL-PGAPD 256 (360)
Q Consensus 184 ~~~g~l~~~d~~tg~~~~~~~~l~-~pngia~~----~dg~~l~v~~-t~~~~i~~~~~~g~~~~~~~~~~~~~-~g~pd 256 (360)
+.+|.|+.+|.++|+......... .| -+... +++..+|+.+ +..++|+.++.+.+.. ....-...+ ...|-
T Consensus 17 t~dG~l~Ald~~tG~~~W~~~~~~~~p-~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~-~~~~~~~~lv~~SP~ 94 (339)
T 2be1_A 17 DVEGGLHAVDRRNGHIIWSIEPENFQP-LIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQ-KLPLSIRQLVSTSPL 94 (339)
T ss_dssp ETTSCEEEEETTTTEEEEEECGGGSCC-SEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEE-EEEEEHHHHHTTCSE
T ss_pred eCCCeEEEEECCCCcEEEEecCCccCC-cEEecCCccccCCcEEEEEECCCCEEEEEECCCCcE-Eeeeccccceecccc
Confidence 456789999988888765433210 11 01100 1223477776 5678888888653211 111100000 00110
Q ss_pred ----eeEE------cCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeC
Q 018144 257 ----NINL------APDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVD 325 (360)
Q Consensus 257 ----~i~~------d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~ 325 (360)
...+ +.+|.+|++... +.++.+|. +|+++..+..
T Consensus 95 ~~~~~pvv~~~~~~~~~g~Vy~Gs~~-----------------------------------g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 95 HLKTNIVVNDSGKIVEDEKVYTGSMR-----------------------------------TIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp EEECC----------CCEEEEECEEE-----------------------------------EEEEEEETTTCCEEEEEST
T ss_pred ccCCCceeecccccccCCEEEEEecC-----------------------------------CEEEEEECCCCcEEEEEec
Confidence 1112 267889999876 78999995 6999888864
No 324
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=84.16 E-value=3.6 Score=39.97 Aligned_cols=85 Identities=13% Similarity=0.095 Sum_probs=57.6
Q ss_pred EEEEEcCCC----C-eEEEEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecC------CcC-cc-eeeeccCCCC-
Q 018144 188 QLLKYDPSS----N-ITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG------ERK-GK-LETFAENLPG- 253 (360)
Q Consensus 188 ~l~~~d~~t----g-~~~~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g------~~~-~~-~~~~~~~~~g- 253 (360)
++-.+|... + .+..+...-..|+|+-++|||++++++.-....+..|+.+. .+. .- ..+..+...|
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 566777653 1 33444445578999999999999999999889999999752 111 10 1112222223
Q ss_pred CCceeEEcCCCCEEEEEec
Q 018144 254 APDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 254 ~pd~i~~d~~G~lwva~~~ 272 (360)
.|--.++|.+|+.|.+++-
T Consensus 379 GPlHt~Fd~~G~aYTtlfi 397 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFI 397 (638)
T ss_dssp CEEEEEECSSSEEEEEETT
T ss_pred cccEEEECCCCceEeeeee
Confidence 4778899999999999863
No 325
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=82.09 E-value=44 Score=33.44 Aligned_cols=26 Identities=15% Similarity=0.198 Sum_probs=21.6
Q ss_pred CcceEEEcCC--CCEEEEecCCeEEEEE
Q 018144 80 HPEDASMDKN--GVIYTATRDGWIKRLQ 105 (360)
Q Consensus 80 ~Pe~i~~d~~--G~l~v~~~~G~I~~~~ 105 (360)
.-.+|++++. +.+|+++..|+|+|.+
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~ 51 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD 51 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC
Confidence 4567899874 7899999888899998
No 326
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=80.15 E-value=53 Score=33.18 Aligned_cols=29 Identities=14% Similarity=0.097 Sum_probs=22.3
Q ss_pred CCcceEEEcC--CCCEEEEecCCeEEEEE-CC
Q 018144 79 NHPEDASMDK--NGVIYTATRDGWIKRLQ-DG 107 (360)
Q Consensus 79 ~~Pe~i~~d~--~G~l~v~~~~G~I~~~~-~g 107 (360)
..-.+|++++ .+.+|+++..|.|+|-+ .|
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG 46 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWDAGT 46 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETTT
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEecCCC
Confidence 3556788886 47899999888899988 44
No 327
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=78.24 E-value=57 Score=32.39 Aligned_cols=135 Identities=12% Similarity=0.120 Sum_probs=73.1
Q ss_pred CCCCEEEEec-----CCeEEEEE--CCeeeEEE------------------ec--CCeEEEEeCC-------CcEEEEc-
Q 018144 88 KNGVIYTATR-----DGWIKRLQ--DGTWVNWK------------------FI--DSHLIICDNA-------NGLHKVS- 132 (360)
Q Consensus 88 ~~G~l~v~~~-----~G~I~~~~--~g~~~~~~------------------~~--~g~L~v~~~~-------~gl~~~~- 132 (360)
-++.||+-.. ...+++++ +++++.+. .. ++.|||.... +.++++|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 4677887542 13578888 55555443 12 6667775421 2356666
Q ss_pred CCC-eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCC--CcC-
Q 018144 133 EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FYF- 208 (360)
Q Consensus 133 ~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~--l~~- 208 (360)
.+. .+.+.. .... +.-...++-.+|.||+.-.. ...+.+++||+.+++++.+... ...
T Consensus 476 ~t~~W~~~~~-~p~~--R~~h~~~~~~~~~iyv~GG~---------------~~~~~v~~yd~~t~~W~~~~~~g~~p~~ 537 (695)
T 2zwa_A 476 KTREWSMIKS-LSHT--RFRHSACSLPDGNVLILGGV---------------TEGPAMLLYNVTEEIFKDVTPKDEFFQN 537 (695)
T ss_dssp TTTEEEECCC-CSBC--CBSCEEEECTTSCEEEECCB---------------CSSCSEEEEETTTTEEEECCCSSGGGGS
T ss_pred CCCcEEECCC-CCCC--cccceEEEEcCCEEEEECCC---------------CCCCCEEEEECCCCceEEccCCCCCCCc
Confidence 444 333321 1111 12233344347899994211 0011689999999988776531 221
Q ss_pred ---cceEEEecCCCEEEEEeCC-------CCEEEEEEecCCc
Q 018144 209 ---ANGVALSRDEDYVVVCESW-------KFRCRKYWLKGER 240 (360)
Q Consensus 209 ---pngia~~~dg~~l~v~~t~-------~~~i~~~~~~g~~ 240 (360)
...++++.+.+.+|+..-. .+.+++|+++...
T Consensus 538 r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 538 SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 2235566653458887532 2568999987543
No 328
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=77.90 E-value=14 Score=33.58 Aligned_cols=73 Identities=11% Similarity=-0.026 Sum_probs=47.1
Q ss_pred cccccEEEcC--------CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeE-EEEeCCCcCcceEEEecCCC
Q 018144 149 RFANDVVEAS--------DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT-TLVADGFYFANGVALSRDED 219 (360)
Q Consensus 149 ~~~n~l~~d~--------dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~-~~~~~~l~~pngia~~~dg~ 219 (360)
..+++|++.+ ||++.+|- ..++.|..+|..++.. ......-.....++++|++.
T Consensus 137 ~~v~~v~~~p~~~~~~~~d~~~las~-----------------s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~ 199 (393)
T 4gq1_A 137 NFVNDIDIADVYSADNRLAEQVIASV-----------------GDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNP 199 (393)
T ss_dssp SCEEEEEEEEEECTTCSEEEEEEEEE-----------------ETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEE
T ss_pred CceEEEEEccccccccCCCCCEEEEE-----------------ECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCC
Confidence 3578888875 77777762 2356677777654433 22333334567899999886
Q ss_pred EEEEEeCCCCEEEEEEecC
Q 018144 220 YVVVCESWKFRCRKYWLKG 238 (360)
Q Consensus 220 ~l~v~~t~~~~i~~~~~~g 238 (360)
.++++....+.|..+|+..
T Consensus 200 ~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 200 NQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp EEEEEEETTSEEEEEETTC
T ss_pred ceEEecCCCCEEEEEECCC
Confidence 5555655667888888753
No 329
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=76.26 E-value=47 Score=30.44 Aligned_cols=116 Identities=9% Similarity=0.131 Sum_probs=70.5
Q ss_pred CCcceEEEcCCCCEEEEecCCeEEEEE-CC--ee----------eEEEecCCeEEEEeCCCcEEEEc-CCC-eEEEeecc
Q 018144 79 NHPEDASMDKNGVIYTATRDGWIKRLQ-DG--TW----------VNWKFIDSHLIICDNANGLHKVS-EDG-VENFLSYV 143 (360)
Q Consensus 79 ~~Pe~i~~d~~G~l~v~~~~G~I~~~~-~g--~~----------~~~~~~~g~L~v~~~~~gl~~~~-~~g-~~~l~~~~ 143 (360)
..+..+++ .+..|+++ .+|.|..++ .. +. ..+.....++.+++.++.++.++ +++ ...+.
T Consensus 88 p~V~~l~f-d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~~~--- 162 (388)
T 1xip_A 88 PDVIFVCF-HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQLA--- 162 (388)
T ss_dssp TTEEEEEE-ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEE---
T ss_pred CCeeEEEE-CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccccc---
Confidence 34888888 35567777 778888888 22 11 11112233466666666677777 555 43322
Q ss_pred CCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeE--E-EEe------C---CCcCcce
Q 018144 144 NGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT--T-LVA------D---GFYFANG 211 (360)
Q Consensus 144 ~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~--~-~~~------~---~l~~png 211 (360)
..+..+++.++| +.++ ..+|.+..|++++++. + .+. + +-..+..
T Consensus 163 -----~~Vs~v~WSpkG-~~vg------------------~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~s 218 (388)
T 1xip_A 163 -----QNVTSFDVTNSQ-LAVL------------------LKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLS 218 (388)
T ss_dssp -----ESEEEEEECSSE-EEEE------------------ETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEE
T ss_pred -----CCceEEEEcCCc-eEEE------------------EcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEE
Confidence 246688999999 4442 2456677778877774 2 231 1 2345678
Q ss_pred EEEecCCCEEEE
Q 018144 212 VALSRDEDYVVV 223 (360)
Q Consensus 212 ia~~~dg~~l~v 223 (360)
|.+.+++.++.+
T Consensus 219 I~wl~~~~flv~ 230 (388)
T 1xip_A 219 VTILSPQDFLAV 230 (388)
T ss_dssp EEESSSSEEEEE
T ss_pred EEEecCCeEEEE
Confidence 889888875554
No 330
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=71.13 E-value=87 Score=31.24 Aligned_cols=75 Identities=11% Similarity=0.084 Sum_probs=44.3
Q ss_pred ccEEEcCCC-cEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeE---EEEe-CCCcCcceEEEecCCCEEEEEeC
Q 018144 152 NDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT---TLVA-DGFYFANGVALSRDEDYVVVCES 226 (360)
Q Consensus 152 n~l~~d~dG-~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~---~~~~-~~l~~pngia~~~dg~~l~v~~t 226 (360)
.+++..+|| .|+++.... ......|++++..+++. ..+. ....+-.++.+++||+.|+++..
T Consensus 224 ~~~~WspDg~~l~y~~~d~-------------~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~ 290 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDE-------------TLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQ 290 (751)
T ss_dssp SCCEECSSTTEEEEEEECT-------------TCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEE
T ss_pred eeEEEecCCCEEEEEEECC-------------CCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEec
Confidence 467788888 566653110 00113688888776532 1221 12223457789999998877653
Q ss_pred --CCCEEEEEEecCC
Q 018144 227 --WKFRCRKYWLKGE 239 (360)
Q Consensus 227 --~~~~i~~~~~~g~ 239 (360)
....|+.++++++
T Consensus 291 ~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 291 SPETAEVHLLDLRKG 305 (751)
T ss_dssp CSSCEEEEEEESSSC
T ss_pred CCCCceEEEEECCCC
Confidence 2457888888653
No 331
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=70.50 E-value=40 Score=33.05 Aligned_cols=82 Identities=9% Similarity=-0.095 Sum_probs=46.0
Q ss_pred EEEEcCCCCeEEEEeCCCcCcceEEEec-CCCEEEEEeC-C----------CCEEEEEEecCCcCcceeeeccCCCCCCc
Q 018144 189 LLKYDPSSNITTLVADGFYFANGVALSR-DEDYVVVCES-W----------KFRCRKYWLKGERKGKLETFAENLPGAPD 256 (360)
Q Consensus 189 l~~~d~~tg~~~~~~~~l~~pngia~~~-dg~~l~v~~t-~----------~~~i~~~~~~g~~~~~~~~~~~~~~g~pd 256 (360)
+..+|+.+++.+.+..--..+...++.+ +++ +|+... . ...+.+||+...+-............+-.
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~~~~~av~~~~g~-l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~ 246 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIVPAAAAIEPTSGR-VLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCP 246 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSCCSEEEEETTTTE-EEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSC
T ss_pred cccCCCCCCeeeeeccCCCCceeEEEEecCCE-EEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccc
Confidence 4567888888776543222456778877 665 666531 1 12577888765433322222211112233
Q ss_pred eeEEcCCCCEEEEEe
Q 018144 257 NINLAPDGTFWIAII 271 (360)
Q Consensus 257 ~i~~d~~G~lwva~~ 271 (360)
+.++..+|.||+.-.
T Consensus 247 ~~~~~~~g~lyv~GG 261 (656)
T 1k3i_A 247 GISMDGNGQIVVTGG 261 (656)
T ss_dssp EEEECTTSCEEEECS
T ss_pred cccCCCCCCEEEeCC
Confidence 466677899999653
No 332
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=66.58 E-value=58 Score=27.46 Aligned_cols=52 Identities=8% Similarity=-0.073 Sum_probs=29.6
Q ss_pred ccEEEEEcCCCCeE--EEEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecC
Q 018144 186 HGQLLKYDPSSNIT--TLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG 238 (360)
Q Consensus 186 ~g~l~~~d~~tg~~--~~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g 238 (360)
.+.+..++..++.. ..+.........+++.++++.++.+. ..+.|..++...
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~iwd~~~ 181 (318)
T 4ggc_A 128 SGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG-NDNLVNVWPSAP 181 (318)
T ss_dssp TSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE-TTSCEEEEESSC
T ss_pred CCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEe-cCcceeEEECCC
Confidence 34455454433322 22233344567788899998665554 456788888753
No 333
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=65.81 E-value=1.1e+02 Score=30.54 Aligned_cols=27 Identities=19% Similarity=0.151 Sum_probs=21.2
Q ss_pred CCcceEEEcCC--CCEEEEecCCeEEEEE
Q 018144 79 NHPEDASMDKN--GVIYTATRDGWIKRLQ 105 (360)
Q Consensus 79 ~~Pe~i~~d~~--G~l~v~~~~G~I~~~~ 105 (360)
..-.+|++++. +.+|+++..|+|+|-.
T Consensus 21 g~i~~i~~~p~~~~~~y~~~~~ggv~~S~ 49 (763)
T 3a0f_A 21 GFISGLVAHPTEKDLIYARTDIGGTYRWN 49 (763)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEE
T ss_pred CceeEEEeCCCCCCEEEEEeccCcEEEEC
Confidence 35567888873 5799999888899987
No 334
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=62.85 E-value=38 Score=30.85 Aligned_cols=99 Identities=13% Similarity=0.075 Sum_probs=59.1
Q ss_pred cCCCEEEEEeCCCC--EEEEEEecCCcCcceeeeccCC---CCCCc-eeEEcCCCCEEEEEecCchhHHHHhhcchhHHH
Q 018144 216 RDEDYVVVCESWKF--RCRKYWLKGERKGKLETFAENL---PGAPD-NINLAPDGTFWIAIIKLDARRMKILNSSKLIKH 289 (360)
Q Consensus 216 ~dg~~l~v~~t~~~--~i~~~~~~g~~~~~~~~~~~~~---~g~pd-~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~ 289 (360)
.+.+.|+.-+...+ .|..||++..+....-.+.... -+.+. ++.+-.+..||+....
T Consensus 37 ~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~----------------- 99 (369)
T 3s9j_A 37 NGKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNN----------------- 99 (369)
T ss_dssp TTEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGG-----------------
T ss_pred CCcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCC-----------------
Confidence 34457877787767 8999998765433222221111 12342 3556677789998766
Q ss_pred HHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCC-cccc-------eeeEEEECCEEEEEe
Q 018144 290 VLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQ-LMSF-------VTSGLQVDNHLYVIS 348 (360)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~-~~~~-------~t~~~~~~g~Lylgs 348 (360)
..+|..+|.+|+++..+.-.... .+.. -..+...++.||++.
T Consensus 100 -----------------~~~i~l~n~~G~~~~k~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~ 149 (369)
T 3s9j_A 100 -----------------ISRLSSINSQGEIIRNYNFQTPEGRFTPLSFGSYYNAPAFIKDSCIFLRQ 149 (369)
T ss_dssp -----------------GTEEEEECTTCCEEEEEECCCTTSCCCCCCCBTTTTBCCEEETTEEEEEC
T ss_pred -----------------cceEEEECCCceEEEEEecCCCccccccccccccccCcceecCceEEEec
Confidence 35899999999999887532211 1111 123445567777753
No 335
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=59.61 E-value=1.4e+02 Score=29.96 Aligned_cols=58 Identities=16% Similarity=0.251 Sum_probs=35.4
Q ss_pred ccccEEEcCC--CcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCC-------cCcceEEEecC-CC
Q 018144 150 FANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-------YFANGVALSRD-ED 219 (360)
Q Consensus 150 ~~n~l~~d~d--G~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l-------~~pngia~~~d-g~ 219 (360)
.+.+|++++. +.+|+.. ..++|++-+......+.+.... .....|++++. .+
T Consensus 16 ~i~~i~~~p~~~~~~~a~~------------------~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~ 77 (789)
T 1sqj_A 16 YITGIVAHPKTKDLLYART------------------DIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPD 77 (789)
T ss_dssp CEEEEEECSSSTTCEEEEE------------------SSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEE
T ss_pred cEEEEEECCCCCCEEEEEe------------------cCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCC
Confidence 5677888764 5788842 3457888765544555543322 23567888874 35
Q ss_pred EEEEEe
Q 018144 220 YVVVCE 225 (360)
Q Consensus 220 ~l~v~~ 225 (360)
.+|++.
T Consensus 78 ~i~~~~ 83 (789)
T 1sqj_A 78 RLYLAQ 83 (789)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 677764
No 336
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=56.27 E-value=79 Score=31.72 Aligned_cols=138 Identities=11% Similarity=0.028 Sum_probs=66.6
Q ss_pred eEEEcC--CCCEEEEecCCeEEEEE-CC-eeeEE--------------Ee---cCCeEEEEeCCCcEEEEcCCC--eEEE
Q 018144 83 DASMDK--NGVIYTATRDGWIKRLQ-DG-TWVNW--------------KF---IDSHLIICDNANGLHKVSEDG--VENF 139 (360)
Q Consensus 83 ~i~~d~--~G~l~v~~~~G~I~~~~-~g-~~~~~--------------~~---~~g~L~v~~~~~gl~~~~~~g--~~~l 139 (360)
.|++|+ .+.+|+++ +|.||+-. .| .++.+ .. .+++||++....+|++-+..| .+.+
T Consensus 592 ~i~~d~~~~~~~y~g~-~g~v~~S~DgG~tW~~~~~~lp~~~~~~~~i~~~~~~~~~l~~~~~~~~l~~S~D~G~tW~~~ 670 (763)
T 3a0f_A 592 GIAADRVQANTFYVYV-EGDFFVSTDGGKSYTKKGNGLPCCWTYTGTPVTSNLRAGELWVSVKGVGIYHSTDFGNTFTAL 670 (763)
T ss_dssp CEEECSSSTTCEEEEE-TTEEEEESSTTSBCEEECBTSCCSSCCCEEEEECSSSTTCEEEEETTTEEEEESSTTSBCEEC
T ss_pred eEEEeccCCCEEEEEc-CCCEEEEeCCCcCccccccCCCcccCccccEEECCCCCCcEEEEcCCCeEEEEcCCCCCceEc
Confidence 567775 45788884 67777765 33 12211 11 256789888666776665444 4444
Q ss_pred eeccCCcccc--ccccEEEc-C-CCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeC---CCcCcceE
Q 018144 140 LSYVNGSKLR--FANDVVEA-S-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD---GFYFANGV 212 (360)
Q Consensus 140 ~~~~~~~~~~--~~n~l~~d-~-dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~---~l~~pngi 212 (360)
. ........ .-.++++. . ...||+.-.. +....++||+=+-.....+.+.. ++..+..|
T Consensus 671 ~-~~~~~~~~~~~~~g~~~~~~~~~~l~~~G~~-------------~~~~~~gl~~S~D~G~tW~~~~~~~~~~~~~~~i 736 (763)
T 3a0f_A 671 A-GSGSSLNPAVFSIGAPQTPNATETLFLWGIP-------------SASQPEGLYMSTDNGGLWTRLNDDAHNYGGATVI 736 (763)
T ss_dssp T-TBTTTBEEEEEEEECCSSTTSSCEEEEEEEC-------------STTSCSEEEEESSTTSCCEECSCTTCCTBCEEEE
T ss_pred c-CCCcccccceeEEeeecCCCCCceEEEEEEc-------------ccCCCcEEEEeCCCCCCcEeccCccccCCCcceE
Confidence 2 11111000 00011111 1 2367774200 00123567776544334454442 23333357
Q ss_pred EEecCC-CEEEEEeCCCCEEEEEEe
Q 018144 213 ALSRDE-DYVVVCESWKFRCRKYWL 236 (360)
Q Consensus 213 a~~~dg-~~l~v~~t~~~~i~~~~~ 236 (360)
+.++.. ..||++..+ ..|+.-++
T Consensus 737 ~~~p~~~~~v~~~T~G-rGi~~g~~ 760 (763)
T 3a0f_A 737 SGDPRIYGRVYIGMNG-RGIICAQA 760 (763)
T ss_dssp EECTTSTTEEEEEEBS-SCEEEEES
T ss_pred EeCCCCCCEEEEeCCC-CeEEEEec
Confidence 777743 357777654 45665554
No 337
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=49.30 E-value=1.4e+02 Score=29.64 Aligned_cols=58 Identities=22% Similarity=0.355 Sum_probs=38.6
Q ss_pred ccccEEEcCC--CcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCC-------cCcceEEEec-CCC
Q 018144 150 FANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-------YFANGVALSR-DED 219 (360)
Q Consensus 150 ~~n~l~~d~d--G~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l-------~~pngia~~~-dg~ 219 (360)
.+.+|++++. +.+|+. ...++|++-+......+.+.... .....|+++| +.+
T Consensus 24 ~i~~i~~~p~~~~~~~~~------------------~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~ 85 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYAR------------------AAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPN 85 (737)
T ss_dssp CCCEEEECSSSTTCEEEE------------------CSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTT
T ss_pred eeeEEEECCCCCCEEEEE------------------ecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCC
Confidence 5778999876 689984 23467999886655666554322 2245788887 445
Q ss_pred EEEEEe
Q 018144 220 YVVVCE 225 (360)
Q Consensus 220 ~l~v~~ 225 (360)
.+|++.
T Consensus 86 ~v~v~~ 91 (737)
T 2cn3_A 86 RVYIVA 91 (737)
T ss_dssp CEEEEE
T ss_pred EEEEEe
Confidence 688875
No 338
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=47.53 E-value=1.3e+02 Score=25.51 Aligned_cols=188 Identities=10% Similarity=0.011 Sum_probs=91.0
Q ss_pred CCeEEEEeCC------CcEEEEc-CCC-eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCcc
Q 018144 116 DSHLIICDNA------NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHG 187 (360)
Q Consensus 116 ~g~L~v~~~~------~gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g 187 (360)
++.|||.... +.+.++| .++ .+.+... ... +.-..+++ -+|.||+.-... ......
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~--r~~~~~~~-~~~~iyv~GG~~------------~~~~~~ 124 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM-RDR--RSTLGAAV-LNGLLYAVGGFD------------GSTGLS 124 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCC-SSC--CBSCEEEE-ETTEEEEEEEEC------------SSCEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCC-Ccc--ccceEEEE-ECCEEEEEcCCC------------CCccCc
Confidence 5667765431 2477777 555 4444321 111 11122333 367899842110 011234
Q ss_pred EEEEEcCCCCeEEEEeCCCcCc---ceEEEecCCCEEEEEeCC-------CCEEEEEEecCCcCcceeeeccCCCC--CC
Q 018144 188 QLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCESW-------KFRCRKYWLKGERKGKLETFAENLPG--AP 255 (360)
Q Consensus 188 ~l~~~d~~tg~~~~~~~~l~~p---ngia~~~dg~~l~v~~t~-------~~~i~~~~~~g~~~~~~~~~~~~~~g--~p 255 (360)
.+.+||+.+++.+.+.. +..+ ..++. -++ .+|+..-. ...+.+|+++.. ..+... ..+. .-
T Consensus 125 ~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~---~W~~~~-~~p~~r~~ 197 (302)
T 2xn4_A 125 SVEAYNIKSNEWFHVAP-MNTRRSSVGVGV-VGG-LLYAVGGYDVASRQCLSTVECYNATTN---EWTYIA-EMSTRRSG 197 (302)
T ss_dssp EEEEEETTTTEEEEECC-CSSCCBSCEEEE-ETT-EEEEECCEETTTTEECCCEEEEETTTT---EEEEEC-CCSSCCBS
T ss_pred eEEEEeCCCCeEeecCC-CCCcccCceEEE-ECC-EEEEEeCCCCCCCccccEEEEEeCCCC---cEEECC-CCcccccc
Confidence 68999999888877642 2222 23333 244 47776321 245888987543 222222 1221 11
Q ss_pred ceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeC-CCCCcccce
Q 018144 256 DNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVD-PTGQLMSFV 334 (360)
Q Consensus 256 d~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~-~~g~~~~~~ 334 (360)
..++. -++.||+--.... ......+.+||++...-..+.. +... ..
T Consensus 198 ~~~~~-~~~~iyv~GG~~~-----------------------------~~~~~~~~~yd~~~~~W~~~~~~~~~r---~~ 244 (302)
T 2xn4_A 198 AGVGV-LNNLLYAVGGHDG-----------------------------PLVRKSVEVYDPTTNAWRQVADMNMCR---RN 244 (302)
T ss_dssp CEEEE-ETTEEEEECCBSS-----------------------------SSBCCCEEEEETTTTEEEEECCCSSCC---BS
T ss_pred ccEEE-ECCEEEEECCCCC-----------------------------CcccceEEEEeCCCCCEeeCCCCCCcc---cc
Confidence 12222 2567888532210 0112468889987665555543 2221 22
Q ss_pred eeEEEECCEEEEEeC-C----CCeEEEEeC
Q 018144 335 TSGLQVDNHLYVISL-T----SNFIGKVQL 359 (360)
Q Consensus 335 t~~~~~~g~Lylgs~-~----~~~i~~~~l 359 (360)
..++..+++||+-+= . .+.+.++++
T Consensus 245 ~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 245 AGVCAVNGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp CEEEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred CeEEEECCEEEEECCcCCCcccccEEEEcC
Confidence 334556788887642 2 234566554
No 339
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=47.30 E-value=1.4e+02 Score=25.66 Aligned_cols=123 Identities=15% Similarity=0.011 Sum_probs=62.8
Q ss_pred ccEEEEEcCCCCeEEEEeCCCcCc---ceEEEecCCCEEEEEeCC------CCEEEEEEecCCcCcceeeeccCCCC-CC
Q 018144 186 HGQLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCESW------KFRCRKYWLKGERKGKLETFAENLPG-AP 255 (360)
Q Consensus 186 ~g~l~~~d~~tg~~~~~~~~l~~p---ngia~~~dg~~l~v~~t~------~~~i~~~~~~g~~~~~~~~~~~~~~g-~p 255 (360)
...+++||+.+++.+.+.. +..+ ...+. -++ .+|+..-. ...+.+|++... +.+... ..+. .-
T Consensus 116 ~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~-~~p~~r~ 188 (315)
T 4asc_A 116 LDSVMCYDRLSFKWGESDP-LPYVVYGHTVLS-HMD-LVYVIGGKGSDRKCLNKMCVYDPKKF---EWKELA-PMQTARS 188 (315)
T ss_dssp CCCEEEEETTTTEEEECCC-CSSCCBSCEEEE-ETT-EEEEECCBCTTSCBCCCEEEEETTTT---EEEECC-CCSSCCB
T ss_pred cceEEEECCCCCcEeECCC-CCCcccceeEEE-ECC-EEEEEeCCCCCCcccceEEEEeCCCC---eEEECC-CCCCchh
Confidence 3569999999888876542 2222 22333 344 47777532 246888987543 222222 1221 11
Q ss_pred ceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeC-CCCCcccce
Q 018144 256 DNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVD-PTGQLMSFV 334 (360)
Q Consensus 256 d~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~-~~g~~~~~~ 334 (360)
.--+.--+|.|||.-.... ......+.++|++...-..+.. |... ..
T Consensus 189 ~~~~~~~~~~iyv~GG~~~-----------------------------~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~ 236 (315)
T 4asc_A 189 LFGATVHDGRIIVAAGVTD-----------------------------TGLTSSAEVYSITDNKWAPFEAFPQER---SS 236 (315)
T ss_dssp SCEEEEETTEEEEEEEECS-----------------------------SSEEEEEEEEETTTTEEEEECCCSSCC---BS
T ss_pred ceEEEEECCEEEEEeccCC-----------------------------CCccceEEEEECCCCeEEECCCCCCcc---cc
Confidence 1111222567888543210 0112478899987665555543 2222 22
Q ss_pred eeEEEECCEEEEE
Q 018144 335 TSGLQVDNHLYVI 347 (360)
Q Consensus 335 t~~~~~~g~Lylg 347 (360)
.+++..+++||+-
T Consensus 237 ~~~~~~~~~l~v~ 249 (315)
T 4asc_A 237 LSLVSLVGTLYAI 249 (315)
T ss_dssp CEEEEETTEEEEE
T ss_pred eeEEEECCEEEEE
Confidence 3445567788774
No 340
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=46.65 E-value=2.2e+02 Score=27.80 Aligned_cols=65 Identities=14% Similarity=0.090 Sum_probs=40.8
Q ss_pred cCcceEEEecCCCEEEEEeCCCCEEEEEEecC-------CcCcceeeeccC--CCC---CCceeEEcCCCCEEEEEec
Q 018144 207 YFANGVALSRDEDYVVVCESWKFRCRKYWLKG-------ERKGKLETFAEN--LPG---APDNINLAPDGTFWIAIIK 272 (360)
Q Consensus 207 ~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g-------~~~~~~~~~~~~--~~g---~pd~i~~d~~G~lwva~~~ 272 (360)
-.|--.+++++| ..|.+-.-...|.+++++. ++......-.+. .|| .+-+-..+++|...+++..
T Consensus 378 lGPlHt~Fd~~G-~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 378 LGPLHTTFDGRG-NAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp SCEEEEEECSSS-EEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred CcccEEEECCCC-ceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 467889999999 6999998888999998752 221111000111 222 1223345889998888875
No 341
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=46.60 E-value=1.4e+02 Score=25.54 Aligned_cols=49 Identities=18% Similarity=0.294 Sum_probs=29.4
Q ss_pred cEEEEEcCCCCeEEEEeCCCcCc---ceEEEecCCCEEEEEeCC-----CCEEEEEEecC
Q 018144 187 GQLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCESW-----KFRCRKYWLKG 238 (360)
Q Consensus 187 g~l~~~d~~tg~~~~~~~~l~~p---ngia~~~dg~~l~v~~t~-----~~~i~~~~~~g 238 (360)
..+.+||+.+++.+.+.. +..+ ...+.. ++ .+|+..-. ...+.+|+++.
T Consensus 137 ~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~ 193 (308)
T 1zgk_A 137 NSVERYEPERDEWHLVAP-MLTRRIGVGVAVL-NR-LLYAVGGFDGTNRLNSAECYYPER 193 (308)
T ss_dssp CCEEEEETTTTEEEECCC-CSSCCBSCEEEEE-TT-EEEEECCBCSSCBCCCEEEEETTT
T ss_pred ccEEEECCCCCeEeECCC-CCccccceEEEEE-CC-EEEEEeCCCCCCcCceEEEEeCCC
Confidence 468999999888876542 2222 233333 44 57777421 24588898754
No 342
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=46.47 E-value=1.4e+02 Score=25.44 Aligned_cols=50 Identities=4% Similarity=-0.145 Sum_probs=30.2
Q ss_pred ccEEEEEcCCCCeEEEEeCCCcCc---ceEEEecCCCEEEEEeCC------CCEEEEEEecC
Q 018144 186 HGQLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCESW------KFRCRKYWLKG 238 (360)
Q Consensus 186 ~g~l~~~d~~tg~~~~~~~~l~~p---ngia~~~dg~~l~v~~t~------~~~i~~~~~~g 238 (360)
...+++||+.+++.+.+.. +..+ ...+. -++ .+|+..-. ...+.+||+..
T Consensus 69 ~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~~d~~~ 127 (306)
T 3ii7_A 69 IKRMDCYNVVKDSWYSKLG-PPTPRDSLAACA-AEG-KIYTSGGSEVGNSALYLFECYDTRT 127 (306)
T ss_dssp CCEEEEEETTTTEEEEEEC-CSSCCBSCEEEE-ETT-EEEEECCBBTTBSCCCCEEEEETTT
T ss_pred cceEEEEeCCCCeEEECCC-CCccccceeEEE-ECC-EEEEECCCCCCCcEeeeEEEEeCCC
Confidence 4579999999998876643 2222 22332 244 47776432 24588898754
No 343
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=46.09 E-value=1.5e+02 Score=25.84 Aligned_cols=48 Identities=13% Similarity=0.074 Sum_probs=28.5
Q ss_pred cEEEEEcCCCCeEEEEeCCCcCc----ceEEEecCCCEEEEEeC------CCCEEEEEEec
Q 018144 187 GQLLKYDPSSNITTLVADGFYFA----NGVALSRDEDYVVVCES------WKFRCRKYWLK 237 (360)
Q Consensus 187 g~l~~~d~~tg~~~~~~~~l~~p----ngia~~~dg~~l~v~~t------~~~~i~~~~~~ 237 (360)
..+.+||+.+++.+.+.. +..+ .+++.. ++ .+|+..- ....+++|+++
T Consensus 168 ~~v~~yd~~~~~W~~~~~-~p~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~v~~~d~d 225 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGE-SPWYGTAGAAVVNK-GD-KTWLINGEAKPGLRTDAVFELDFT 225 (357)
T ss_dssp CEEEEEETTTTEEEEEEE-CSSCCCBSCEEEEE-TT-EEEEECCEEETTEECCCEEEEECC
T ss_pred ccEEEEeCCCCcEEECCC-CCCCCcccccEEEE-CC-EEEEEeeecCCCcccCceEEEEec
Confidence 579999999988877642 2211 233333 34 4777632 12457778763
No 344
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=45.77 E-value=1.7e+02 Score=26.37 Aligned_cols=145 Identities=9% Similarity=-0.073 Sum_probs=68.1
Q ss_pred CCeEEEEeCCCcEEE-Ec-CCC--eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEE
Q 018144 116 DSHLIICDNANGLHK-VS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLK 191 (360)
Q Consensus 116 ~g~L~v~~~~~gl~~-~~-~~g--~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~ 191 (360)
++.++++....+.++ .| ++| +..+... .........+++.++|.+.++-+... ...++..+...+.+..
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~--~~~v~~v~~vafSpdG~~lvs~s~~~-----~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKMHID--DSYQASVCHKAYSEMGLLFIVLSHPC-----AKESESLRSPVFQLIV 264 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEEECC--C---CCCEEEEEEETTEEEEEEC-----------------CCEEEEE
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEEcCC--CcceeeeEEEEECCCCCEEEEeccCC-----CcceeeccCCCcEEEE
Confidence 446666654545444 56 677 4555311 11123456678999998776533210 0112334555677888
Q ss_pred EcCCCCeEEEEe-----CCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeeeccCCCCCCceeEEcCCCCE
Q 018144 192 YDPSSNITTLVA-----DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTF 266 (360)
Q Consensus 192 ~d~~tg~~~~~~-----~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~~~~g~pd~i~~d~~G~l 266 (360)
+|+.+++..... ++. ..+-+..+.++. +.++.+..+.|..+|+...+ ....+.......-..+++.++|.+
T Consensus 265 Wd~~tgk~l~v~~~~~p~Gh-~~~~lsg~~sg~-~lASgS~DgTIkIWDl~tGk--~l~tL~gH~~~vvs~vafSPDG~~ 340 (356)
T 2w18_A 265 INPKTTLSVGVMLYCLPPGQ-AGRFLEGDVKDH-CAAAILTSGTIAIWDLLLGQ--CTALLPPVSDQHWSFVKWSGTDSH 340 (356)
T ss_dssp EETTTTEEEEEEEECCCTTC-CCCEEEEEEETT-EEEEEETTSCEEEEETTTCS--EEEEECCC--CCCCEEEECSSSSE
T ss_pred EECCCCEEEEEEEeeccCCC-cceeEccccCCC-EEEEEcCCCcEEEEECCCCc--EEEEecCCCCCeEEEEEECCCCCE
Confidence 899888754321 111 001122222233 44554445677778875322 112222111111223678999987
Q ss_pred EEEEe
Q 018144 267 WIAII 271 (360)
Q Consensus 267 wva~~ 271 (360)
.++..
T Consensus 341 LaSGS 345 (356)
T 2w18_A 341 LLAGQ 345 (356)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 66544
No 345
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=43.46 E-value=1.3e+02 Score=29.83 Aligned_cols=47 Identities=15% Similarity=0.270 Sum_probs=22.0
Q ss_pred EEEeCCCcEEEEcCCC--eEEEeeccCCccccccccEEEcCC--CcEEEEe
Q 018144 120 IICDNANGLHKVSEDG--VENFLSYVNGSKLRFANDVVEASD--GSLYFTV 166 (360)
Q Consensus 120 ~v~~~~~gl~~~~~~g--~~~l~~~~~~~~~~~~n~l~~d~d--G~l~vtd 166 (360)
|+.....|+++-+..| .+.+........+.....|++++. +++|++-
T Consensus 59 ~~~t~~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~vyvag 109 (685)
T 3f6k_A 59 IMTFGQSKLYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLTA 109 (685)
T ss_dssp ----CEEEEEEESSTTSSCEECGGGGTTCCBCGGGCEEECSTTCCCEEEEE
T ss_pred EEeecCCeEEEEeCCCCCceECcCCCCCCcccceeEEEECCCCCCEEEEEE
Confidence 3333335566655444 444433222222223467888873 3688763
No 346
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=42.62 E-value=1.6e+02 Score=25.12 Aligned_cols=49 Identities=18% Similarity=0.166 Sum_probs=29.0
Q ss_pred cEEEEEcCCCCeEEEEeCCCcCc---ceEEEecCCCEEEEEeCC-----CCEEEEEEecC
Q 018144 187 GQLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCESW-----KFRCRKYWLKG 238 (360)
Q Consensus 187 g~l~~~d~~tg~~~~~~~~l~~p---ngia~~~dg~~l~v~~t~-----~~~i~~~~~~g 238 (360)
..+++||+.+++.+.+.. +..+ .+++.. ++ .+|+..-. ...+.+||+..
T Consensus 90 ~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAP-MSVPRNRIGVGVI-DG-HIYAVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp CCEEEEETTTTEEEECCC-CSSCCBTCEEEEE-TT-EEEEECCEETTEECCCEEEEETTT
T ss_pred ceEEEECCCCCeEeECCC-CCcCccccEEEEE-CC-EEEEEcCCCCCcccccEEEECCCC
Confidence 468999999888876542 2222 233332 44 47777321 24588888754
No 347
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=41.82 E-value=1.6e+02 Score=24.95 Aligned_cols=107 Identities=14% Similarity=0.120 Sum_probs=56.2
Q ss_pred cCCeEEEEeCC-----CcEEEEc-CCC-eEEEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCcc
Q 018144 115 IDSHLIICDNA-----NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHG 187 (360)
Q Consensus 115 ~~g~L~v~~~~-----~gl~~~~-~~g-~~~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g 187 (360)
.++.|||.... +.+.+++ .++ .+.+... +..+ .-..+ +.-+|.||+.-... .......
T Consensus 54 ~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r--~~~~~-~~~~~~iyv~GG~~-----------~~~~~~~ 118 (306)
T 3ii7_A 54 WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGP-PTPR--DSLAA-CAAEGKIYTSGGSE-----------VGNSALY 118 (306)
T ss_dssp ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECC-SSCC--BSCEE-EEETTEEEEECCBB-----------TTBSCCC
T ss_pred ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCC-Cccc--cceeE-EEECCEEEEECCCC-----------CCCcEee
Confidence 36778876431 4577788 555 5444321 1111 11222 23367899852210 0012235
Q ss_pred EEEEEcCCCCeEEEEeCCCcCc---ceEEEecCCCEEEEEeCC---------CCEEEEEEecCC
Q 018144 188 QLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCESW---------KFRCRKYWLKGE 239 (360)
Q Consensus 188 ~l~~~d~~tg~~~~~~~~l~~p---ngia~~~dg~~l~v~~t~---------~~~i~~~~~~g~ 239 (360)
.+++||+.+++.+.+.. +..+ ...+. -++ .+|+..-. ...+.+||++..
T Consensus 119 ~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 119 LFECYDTRTESWHTKPS-MLTQRCSHGMVE-ANG-LIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp CEEEEETTTTEEEEECC-CSSCCBSCEEEE-ETT-EEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred eEEEEeCCCCceEeCCC-CcCCcceeEEEE-ECC-EEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 69999999888876632 2222 22333 344 47777421 345888987543
No 348
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=41.29 E-value=1.8e+02 Score=25.33 Aligned_cols=38 Identities=8% Similarity=0.032 Sum_probs=21.5
Q ss_pred eEEEEECCCCcEEEEEeC-CCCCcccceeeEEEECCEEEEE
Q 018144 308 AHLIHVAEDGTIIRNLVD-PTGQLMSFVTSGLQVDNHLYVI 347 (360)
Q Consensus 308 ~~v~~~~~~g~~~~~~~~-~~g~~~~~~t~~~~~~g~Lylg 347 (360)
..+.+||+....-+.+.. |... ....+++..+++||+-
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~--~~~~~~~~~~~~iyv~ 206 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYG--TAGAAVVNKGDKTWLI 206 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCC--CBSCEEEEETTEEEEE
T ss_pred ccEEEEeCCCCcEEECCCCCCCC--cccccEEEECCEEEEE
Confidence 578999987655444432 2211 1113455567888875
No 349
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=39.94 E-value=1.8e+02 Score=24.88 Aligned_cols=49 Identities=10% Similarity=-0.066 Sum_probs=29.0
Q ss_pred cEEEEEcCCCCeEEEEeCCCcCc---ceEEEecCCCEEEEEeCC--------CCEEEEEEecC
Q 018144 187 GQLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCESW--------KFRCRKYWLKG 238 (360)
Q Consensus 187 g~l~~~d~~tg~~~~~~~~l~~p---ngia~~~dg~~l~v~~t~--------~~~i~~~~~~g 238 (360)
..+++||+.+++.+.+.. +..| .+++.. ++ .+|+..-. .+.+.+|++..
T Consensus 67 ~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~ 126 (315)
T 4asc_A 67 AYFLQFDHLDSEWLGMPP-LPSPRCLFGLGEA-LN-SIYVVGGREIKDGERCLDSVMCYDRLS 126 (315)
T ss_dssp EEEEEEETTTTEEEECCC-BSSCEESCEEEEE-TT-EEEEECCEESSTTCCBCCCEEEEETTT
T ss_pred cceEEecCCCCeEEECCC-CCcchhceeEEEE-CC-EEEEEeCCcCCCCCcccceEEEECCCC
Confidence 348999999888876532 2222 233333 44 57776431 24588888754
No 350
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=39.59 E-value=1.7e+02 Score=24.64 Aligned_cols=135 Identities=10% Similarity=0.061 Sum_probs=67.2
Q ss_pred ccEEEEEcCCCCe---EEEEeCCCcCc---ceEEEecCCCEEEEEeCC-----CCEEEEEEecCCcCcceeeeccC-CCC
Q 018144 186 HGQLLKYDPSSNI---TTLVADGFYFA---NGVALSRDEDYVVVCESW-----KFRCRKYWLKGERKGKLETFAEN-LPG 253 (360)
Q Consensus 186 ~g~l~~~d~~tg~---~~~~~~~l~~p---ngia~~~dg~~l~v~~t~-----~~~i~~~~~~g~~~~~~~~~~~~-~~g 253 (360)
...+++||+.+++ .+.+.. +..+ ..++.. ++ .+|+..-. ...+.+||+...+ .+..... .+.
T Consensus 77 ~~~~~~~d~~~~~~~~W~~~~~-~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~d~~~~~---W~~~~~~p~~r 150 (301)
T 2vpj_A 77 LSSVECLDYTADEDGVWYSVAP-MNVRRGLAGATTL-GD-MIYVSGGFDGSRRHTSMERYDPNIDQ---WSMLGDMQTAR 150 (301)
T ss_dssp CCCEEEEETTCCTTCCCEEECC-CSSCCBSCEEEEE-TT-EEEEECCBCSSCBCCEEEEEETTTTE---EEEEEECSSCC
T ss_pred CceEEEEECCCCCCCeeEECCC-CCCCccceeEEEE-CC-EEEEEcccCCCcccceEEEEcCCCCe---EEECCCCCCCc
Confidence 3569999998887 766532 2222 223332 44 47777421 2468899875432 2222211 111
Q ss_pred CCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeC-CCCCccc
Q 018144 254 APDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVD-PTGQLMS 332 (360)
Q Consensus 254 ~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~-~~g~~~~ 332 (360)
.-...+. -+|.||+...... ......+.++|++......+.. |...
T Consensus 151 ~~~~~~~-~~~~iyv~GG~~~-----------------------------~~~~~~~~~~d~~~~~W~~~~~~p~~r--- 197 (301)
T 2vpj_A 151 EGAGLVV-ASGVIYCLGGYDG-----------------------------LNILNSVEKYDPHTGHWTNVTPMATKR--- 197 (301)
T ss_dssp BSCEEEE-ETTEEEEECCBCS-----------------------------SCBCCCEEEEETTTTEEEEECCCSSCC---
T ss_pred ccceEEE-ECCEEEEECCCCC-----------------------------CcccceEEEEeCCCCcEEeCCCCCccc---
Confidence 1112222 2577888532210 0112468889987665554432 2221
Q ss_pred ceeeEEEECCEEEEEe-CC----CCeEEEEeC
Q 018144 333 FVTSGLQVDNHLYVIS-LT----SNFIGKVQL 359 (360)
Q Consensus 333 ~~t~~~~~~g~Lylgs-~~----~~~i~~~~l 359 (360)
...+++..+++||+-+ .. .+.+.++++
T Consensus 198 ~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 229 (301)
T 2vpj_A 198 SGAGVALLNDHIYVVGGFDGTAHLSSVEAYNI 229 (301)
T ss_dssp BSCEEEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred ccceEEEECCEEEEEeCCCCCcccceEEEEeC
Confidence 2234455577887754 22 244555554
No 351
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=35.94 E-value=2.1e+02 Score=24.48 Aligned_cols=48 Identities=15% Similarity=-0.032 Sum_probs=28.0
Q ss_pred EEEEEcCCCCeEEEEeCCCcCc---ceEEEecCCCEEEEEeCC-------CCEEEEEEecC
Q 018144 188 QLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCESW-------KFRCRKYWLKG 238 (360)
Q Consensus 188 ~l~~~d~~tg~~~~~~~~l~~p---ngia~~~dg~~l~v~~t~-------~~~i~~~~~~g 238 (360)
.+++||+.+++.+.+. .+..+ .+++.. ++ .+|+..-. ...+.+||+..
T Consensus 79 ~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~~ 136 (318)
T 2woz_A 79 YFFQLDNVSSEWVGLP-PLPSARCLFGLGEV-DD-KIYVVAGKDLQTEASLDSVLCYDPVA 136 (318)
T ss_dssp EEEEEETTTTEEEECS-CBSSCBCSCEEEEE-TT-EEEEEEEEBTTTCCEEEEEEEEETTT
T ss_pred cEEEEeCCCCcEEECC-CCCccccccceEEE-CC-EEEEEcCccCCCCcccceEEEEeCCC
Confidence 4899999988887653 22222 233333 44 47776421 13578888754
No 352
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=35.18 E-value=2.6e+02 Score=25.39 Aligned_cols=80 Identities=13% Similarity=0.092 Sum_probs=45.0
Q ss_pred CccEEEEEcCCCCeEEEEeCCCcCcceEEEecCCCEEEEEeCCCCEEEEEEecCCcCcceeee------ccC--CCCCCc
Q 018144 185 PHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETF------AEN--LPGAPD 256 (360)
Q Consensus 185 ~~g~l~~~d~~tg~~~~~~~~l~~pngia~~~dg~~l~v~~t~~~~i~~~~~~g~~~~~~~~~------~~~--~~g~pd 256 (360)
.+|.|+.+|.++++..... .....++++++| +++.. ..+.+..|++++........+ .+. ....+.
T Consensus 144 ~dG~L~v~dl~~~~~~~~~---~~Vs~v~WSpkG--~~vg~-~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~ 217 (388)
T 1xip_A 144 SVNDLSALDLRTKSTKQLA---QNVTSFDVTNSQ--LAVLL-KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPL 217 (388)
T ss_dssp TTSEEEEEETTTCCEEEEE---ESEEEEEECSSE--EEEEE-TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEE
T ss_pred CCCCEEEEEccCCcccccc---CCceEEEEcCCc--eEEEE-cCCcEEEEcCCCccccccceecCCcccccccCCCeeEE
Confidence 3577888887766655432 356789999999 33343 346688888765432112222 110 122345
Q ss_pred eeEEcCCCCEEEEE
Q 018144 257 NINLAPDGTFWIAI 270 (360)
Q Consensus 257 ~i~~d~~G~lwva~ 270 (360)
.|..-+++.+.++-
T Consensus 218 sI~wl~~~~flv~y 231 (388)
T 1xip_A 218 SVTILSPQDFLAVF 231 (388)
T ss_dssp EEEESSSSEEEEEE
T ss_pred EEEEecCCeEEEEE
Confidence 56666766555543
No 353
>4aay_B AROB; oxidoreductase, rieske, iron sulfur, molybdopterin; HET: MGD; 2.70A {Rhizobium species}
Probab=32.17 E-value=1.8e+02 Score=23.15 Aligned_cols=15 Identities=13% Similarity=0.248 Sum_probs=11.1
Q ss_pred cccEEEcCCCcEEEE
Q 018144 151 ANDVVEASDGSLYFT 165 (360)
Q Consensus 151 ~n~l~~d~dG~l~vt 165 (360)
...+.+|.+|.||..
T Consensus 147 ~y~v~vd~dG~V~av 161 (175)
T 4aay_B 147 QYVLRVADNGDIFAE 161 (175)
T ss_dssp BEEEEECTTSEEEEE
T ss_pred EEEEEEEcCCEEEEE
Confidence 446778888999974
No 354
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=26.55 E-value=4.4e+02 Score=25.39 Aligned_cols=20 Identities=15% Similarity=0.315 Sum_probs=16.4
Q ss_pred EEEEECCCCcEEEEEeCCCC
Q 018144 309 HLIHVAEDGTIIRNLVDPTG 328 (360)
Q Consensus 309 ~v~~~~~~g~~~~~~~~~~g 328 (360)
.|++++.+|++...+..+.+
T Consensus 377 ~I~~Id~tG~V~W~LGg~~~ 396 (571)
T 3elq_A 377 GVVKIGRDKQVKWILAPSKG 396 (571)
T ss_dssp EEEEEETTSCEEEEESCSTT
T ss_pred EEEEEcCCCcEEEEECCCCC
Confidence 78899989999998876653
No 355
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=25.95 E-value=3e+02 Score=23.33 Aligned_cols=49 Identities=18% Similarity=0.151 Sum_probs=29.9
Q ss_pred cEEEEEcCCCCeEEEEeCCCcCc---ceEEEecCCCEEEEEeCC------CCEEEEEEecC
Q 018144 187 GQLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCESW------KFRCRKYWLKG 238 (360)
Q Consensus 187 g~l~~~d~~tg~~~~~~~~l~~p---ngia~~~dg~~l~v~~t~------~~~i~~~~~~g 238 (360)
..+++||+.+++.+.+.. +..+ ...+. .++ .+|+..-. .+.+.+||++.
T Consensus 127 ~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~~ 184 (318)
T 2woz_A 127 DSVLCYDPVAAKWSEVKN-LPIKVYGHNVIS-HNG-MIYCLGGKTDDKKCTNRVFIYNPKK 184 (318)
T ss_dssp EEEEEEETTTTEEEEECC-CSSCEESCEEEE-ETT-EEEEECCEESSSCBCCCEEEEETTT
T ss_pred ceEEEEeCCCCCEeECCC-CCCcccccEEEE-ECC-EEEEEcCCCCCCCccceEEEEcCCC
Confidence 579999999888876642 2222 23333 455 47776421 24588999764
No 356
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=23.07 E-value=5.4e+02 Score=25.17 Aligned_cols=111 Identities=8% Similarity=0.064 Sum_probs=57.3
Q ss_pred cCCeEEEEeCC-----CcEEEEc-CCC-eEEEe-ecc-C-CccccccccEEEcC-CCcEEEEeCCCCCCCccceeccccc
Q 018144 115 IDSHLIICDNA-----NGLHKVS-EDG-VENFL-SYV-N-GSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEG 183 (360)
Q Consensus 115 ~~g~L~v~~~~-----~gl~~~~-~~g-~~~l~-~~~-~-~~~~~~~n~l~~d~-dG~l~vtd~~~~~~~~~~~~~~~~~ 183 (360)
.++.|||.... +.++.++ .++ .+.+. ... . ...-+.-..+++-. +|.||+.-.... ..
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~-----------~~ 464 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKA-----------PH 464 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSS-----------TT
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCC-----------CC
Confidence 35667765432 3477788 555 55554 200 0 11112223444444 789999522100 00
Q ss_pred CCccEEEEEcCCCCeEEEEeCCCcCc---ceEEEecCCCEEEEEeCCC--CEEEEEEecC
Q 018144 184 KPHGQLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCESWK--FRCRKYWLKG 238 (360)
Q Consensus 184 ~~~g~l~~~d~~tg~~~~~~~~l~~p---ngia~~~dg~~l~v~~t~~--~~i~~~~~~g 238 (360)
.....+++||+.+++++.+. .+..| ...+.-.+++ +|+..-.. ..+.+||+..
T Consensus 465 ~~~~dv~~yd~~t~~W~~~~-~~p~~R~~h~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t 522 (695)
T 2zwa_A 465 QGLSDNWIFDMKTREWSMIK-SLSHTRFRHSACSLPDGN-VLILGGVTEGPAMLLYNVTE 522 (695)
T ss_dssp CBCCCCEEEETTTTEEEECC-CCSBCCBSCEEEECTTSC-EEEECCBCSSCSEEEEETTT
T ss_pred CccccEEEEeCCCCcEEECC-CCCCCcccceEEEEcCCE-EEEECCCCCCCCEEEEECCC
Confidence 12346899999988887653 22222 2344433665 77764211 1588998764
No 357
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=21.55 E-value=3e+02 Score=26.57 Aligned_cols=53 Identities=17% Similarity=0.122 Sum_probs=35.8
Q ss_pred ccEEEEEcCCCCeEEEEeC---CCcCcceE----EEecCC----CEEEEEeCCCCEEEEEEecCC
Q 018144 186 HGQLLKYDPSSNITTLVAD---GFYFANGV----ALSRDE----DYVVVCESWKFRCRKYWLKGE 239 (360)
Q Consensus 186 ~g~l~~~d~~tg~~~~~~~---~l~~pngi----a~~~dg----~~l~v~~t~~~~i~~~~~~g~ 239 (360)
...||.+|.++|++..... ....++|+ .++.|+ +.+|+.+.. +.|+|||+.+.
T Consensus 222 ~~~Lyv~d~~tG~li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~-GnlWRfDl~~~ 285 (570)
T 3hx6_A 222 KAALLIIDMETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQ-GNLWRFDLIAG 285 (570)
T ss_dssp CEEEEEEETTTCCEEEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEEEETT-SEEEEEECSCS
T ss_pred ccEEEEEECCCCceEEEEecCCCCccCCccccceEEecCCCCceeEEEEEeCC-CcEEEEEcCCC
Confidence 4579999999988654321 12234554 255554 479999974 68999999754
No 358
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=21.08 E-value=3.7e+02 Score=22.49 Aligned_cols=49 Identities=20% Similarity=0.180 Sum_probs=28.6
Q ss_pred cEEEEEcCCCCeEEEEeCCCcCc---ceEEEecCCCEEEEEeC-C-C---CEEEEEEecC
Q 018144 187 GQLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCES-W-K---FRCRKYWLKG 238 (360)
Q Consensus 187 g~l~~~d~~tg~~~~~~~~l~~p---ngia~~~dg~~l~v~~t-~-~---~~i~~~~~~g 238 (360)
..+++||+.+++.+.+.. +..+ .+++.. ++ .+|+..- . . ..+.+|++..
T Consensus 77 ~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~~~ 133 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVAN-MRDRRSTLGAAVL-NG-LLYAVGGFDGSTGLSSVEAYNIKS 133 (302)
T ss_dssp CCEEEEETTTTEEEEECC-CSSCCBSCEEEEE-TT-EEEEEEEECSSCEEEEEEEEETTT
T ss_pred cceEEECCCCCceeeCCC-CCccccceEEEEE-CC-EEEEEcCCCCCccCceEEEEeCCC
Confidence 468999999888877643 2222 233332 44 4666532 1 1 3577888754
No 359
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=20.02 E-value=3.8e+02 Score=22.31 Aligned_cols=131 Identities=16% Similarity=0.207 Sum_probs=70.4
Q ss_pred CCCEEEEe-cC-----CeEEEEE--CCe---eeEEE------------ecCCeEEEEeCC------CcEEEEc-CCC-eE
Q 018144 89 NGVIYTAT-RD-----GWIKRLQ--DGT---WVNWK------------FIDSHLIICDNA------NGLHKVS-EDG-VE 137 (360)
Q Consensus 89 ~G~l~v~~-~~-----G~I~~~~--~g~---~~~~~------------~~~g~L~v~~~~------~gl~~~~-~~g-~~ 137 (360)
++.||+-. .+ ..+++++ +++ ++.+. ..++.|||.... +.+..+| .++ .+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 56787643 22 3688888 555 54331 236778886532 2477788 555 55
Q ss_pred EEeeccCCccccccccEEEcCCCcEEEEeCCCCCCCccceecccccCCccEEEEEcCCCCeEEEEeCCCcCc---ceEEE
Q 018144 138 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA---NGVAL 214 (360)
Q Consensus 138 ~l~~~~~~~~~~~~n~l~~d~dG~l~vtd~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tg~~~~~~~~l~~p---ngia~ 214 (360)
.+... ... ..-...++ -+|.||+.-.... ......+.+||+.+++.+.+. .+..+ ..++.
T Consensus 142 ~~~~~-p~~--r~~~~~~~-~~~~iyv~GG~~~------------~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~ 204 (301)
T 2vpj_A 142 MLGDM-QTA--REGAGLVV-ASGVIYCLGGYDG------------LNILNSVEKYDPHTGHWTNVT-PMATKRSGAGVAL 204 (301)
T ss_dssp EEEEC-SSC--CBSCEEEE-ETTEEEEECCBCS------------SCBCCCEEEEETTTTEEEEEC-CCSSCCBSCEEEE
T ss_pred ECCCC-CCC--cccceEEE-ECCEEEEECCCCC------------CcccceEEEEeCCCCcEEeCC-CCCcccccceEEE
Confidence 44322 111 11122222 3688999522100 012356899999989887763 22222 12332
Q ss_pred ecCCCEEEEEeCC-----CCEEEEEEecC
Q 018144 215 SRDEDYVVVCESW-----KFRCRKYWLKG 238 (360)
Q Consensus 215 ~~dg~~l~v~~t~-----~~~i~~~~~~g 238 (360)
-++ .+|+..-. ...+.+|+++.
T Consensus 205 -~~~-~i~v~GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 205 -LND-HIYVVGGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp -ETT-EEEEECCBCSSSBCCCEEEEETTT
T ss_pred -ECC-EEEEEeCCCCCcccceEEEEeCCC
Confidence 244 47776432 24688998754
Done!