BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018145
(360 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/341 (53%), Positives = 238/341 (69%), Gaps = 8/341 (2%)
Query: 28 AMQLAMGVVLPMATQAAIQLGVFEIIAKAG---ELSAPEIAAQLQAQNVKAPMMLDRMLR 84
AMQLA VLPM ++A++L + EIIAKAG ++S EIA+QL N AP+MLDRMLR
Sbjct: 23 AMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLR 82
Query: 85 LLVSHRVLECSVSGGE-----RLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWLG 139
LL + +L CSV + RLY L V+KY V N+DG S+ + DKV MESW
Sbjct: 83 LLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYH 142
Query: 140 LKDAVMEGGIPFNRVHGMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVE 199
LKDAV++GGIPFN+ +GM FEY +PRFN+ +++ M +HSTI M++ILE Y GF+ ++
Sbjct: 143 LKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLK 202
Query: 200 RLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMFESVPEGDAI 259
LVDVGGG G ++ I SKYP IK +NFDLPHV++DAPSY GVEHVGG+MF S+P+ DA+
Sbjct: 203 SLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAV 262
Query: 260 LMKWILHCWDDDHCLRILKNCYKAVPGNGKVIVMNSIVPEIPEVSSAARETSLLDVLLMT 319
MKWI H W D+HCL+ LKNCY+A+P NGKVIV I+P P+ S A + +DV+++
Sbjct: 263 FMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLA 322
Query: 320 RDGGGRERTKKEYTELAIAAGFKGINFASCVCNLYIMEFFK 360
+ GG+ERT+KE+ +LA AGF+G N YIMEF K
Sbjct: 323 HNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/342 (52%), Positives = 244/342 (71%), Gaps = 9/342 (2%)
Query: 28 AMQLAMGVVLPMATQAAIQLGVFEIIAKA----GELSAPEIAAQLQAQNVKAPMMLDRML 83
AMQLA VLPMA +AAI+L V EI+AK+ G +S EIAAQL N +AP+MLDR+L
Sbjct: 25 AMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVL 84
Query: 84 RLLVSHRVLECSV----SGG-ERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWL 138
RLL S+ V+ ++ SG ERLY L PV K+ N+DG SL F+ L DKV +E W
Sbjct: 85 RLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWF 144
Query: 139 GLKDAVMEGGIPFNRVHGMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNV 198
LKDA++EGGIPFN+ +GM+IF+Y + R N+ +++ M ++STI M++ILE Y GF+ +
Sbjct: 145 YLKDAILEGGIPFNKAYGMNIFDYHGTDHRINKVFNKGMSSNSTITMKKILEMYNGFEGL 204
Query: 199 ERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMFESVPEGDA 258
+VDVGGG G SMI +KYP I A+NFDLPHV+QDAP+++GVEH+GG+MF+ VP+GDA
Sbjct: 205 TTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDA 264
Query: 259 ILMKWILHCWDDDHCLRILKNCYKAVPGNGKVIVMNSIVPEIPEVSSAARETSLLDVLLM 318
I +KWI H W D+HCL++LKNCY A+P +GKVIV I+P P+ S A + D L++
Sbjct: 265 IFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALML 324
Query: 319 TRDGGGRERTKKEYTELAIAAGFKGINFASCVCNLYIMEFFK 360
+ GG+ERT+KE+ LA+A+GF+G ASC N Y+MEF K
Sbjct: 325 AYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 336 bits (862), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 163/341 (47%), Positives = 224/341 (65%), Gaps = 8/341 (2%)
Query: 28 AMQLAMGVVLPMATQAAIQLGVFEIIAKAG--ELSAPEIAAQL-QAQNVKAPMMLDRMLR 84
A+QLA VLPM + AI+LG+ EI+ AG L+ E+AA+L A N +AP M+DR+LR
Sbjct: 24 ALQLASSSVLPMTLKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILR 83
Query: 85 LLVSHRVLECSVSGGE-----RLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWLG 139
LL S+ V+ C V G+ R Y PV K+ N+DG S+ + DKV MESW
Sbjct: 84 LLASYNVVTCLVEEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYY 143
Query: 140 LKDAVMEGGIPFNRVHGMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVE 199
LKDAV++GGIPFN+ +GM FEY +PRFN ++E M NHS I +++LE Y GF+ +
Sbjct: 144 LKDAVLDGGIPFNKAYGMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLLELYHGFEGLG 203
Query: 200 RLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMFESVPEGDAI 259
LVDVGGG G T++ I + YP IK VNFDLPHV+ +AP + GV HVGG+MF+ VP GD I
Sbjct: 204 TLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSGDTI 263
Query: 260 LMKWILHCWDDDHCLRILKNCYKAVPGNGKVIVMNSIVPEIPEVSSAARETSLLDVLLMT 319
LMKWILH W D HC +LKNCY A+P +GKV+++ I+P PE + +++ +D++++
Sbjct: 264 LMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLA 323
Query: 320 RDGGGRERTKKEYTELAIAAGFKGINFASCVCNLYIMEFFK 360
+ GGRER ++E+ LA AGF G+ N + +EF K
Sbjct: 324 HNPGGRERYEREFQALARGAGFTGVKSTYIYANAWAIEFTK 364
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/346 (41%), Positives = 208/346 (60%), Gaps = 14/346 (4%)
Query: 28 AMQLAMGVVLPMATQAAIQLGVFEIIAKAGE----LSAPEIAAQLQA--QNVKAPMMLDR 81
AM L +V P AAI L +FEIIAKA +S EIA++L A Q+ P LDR
Sbjct: 28 AMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDR 87
Query: 82 MLRLLVSHRVLECSV-----SGGERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMES 136
MLRLL S+ VL + G ER+Y L+ V KY V ++ L F ++
Sbjct: 88 MLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQV 147
Query: 137 WLGLKDAVMEGGIP-FNRVHGMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGF 195
W+ K+AV++ I F VHG+ +E+ + + N+ ++++M + M+R+LE Y GF
Sbjct: 148 WMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGF 207
Query: 196 QNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMFESVPE 255
+ + LVDVGGG G L +I SKYP IK +NFDLP V+++AP +G+EHVGG+MF SVP+
Sbjct: 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQ 267
Query: 256 GDAILMKWILHCWDDDHCLRILKNCYKAVPGNGKVIVMNSIVPEIPEVSSAARETSLLDV 315
GDA+++K + H W D+ C+ L NC+KA+ NGKVI++ I+PE P S ++ S LD
Sbjct: 268 GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDN 327
Query: 316 LLMTRDGGGRERTKKEYTELAIAAGFKGINFASCVCN-LYIMEFFK 360
L+ GGRERT+K+Y +L+ +GF A N L +MEF+K
Sbjct: 328 LMFIT-VGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 235 bits (600), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 140/346 (40%), Positives = 199/346 (57%), Gaps = 14/346 (4%)
Query: 28 AMQLAMGVVLPMATQAAIQLGVFEIIAKA---GELSAP-EIAAQLQA--QNVKAPMMLDR 81
A L +V P AAI L +FEIIAKA G +P EIA++L A Q+ P LDR
Sbjct: 28 AXVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFXSPSEIASKLPASTQHSDLPNRLDR 87
Query: 82 MLRLLVSHRVLECSV-----SGGERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMES 136
LRLL S+ VL + G ER+Y L+ V KY V ++ L F ++
Sbjct: 88 XLRLLASYSVLTSTTRTIEDGGAERVYGLSXVGKYLVPDESRGYLASFTTFLCYPALLQV 147
Query: 137 WLGLKDAVMEGGIP-FNRVHGMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGF 195
W K+AV++ I F VHG+ +E+ + + N+ ++++ + +R LE Y GF
Sbjct: 148 WXNFKEAVVDEDIDLFKNVHGVTKYEFXGKDKKXNQIFNKSXVDVCATEXKRXLEIYTGF 207
Query: 196 QNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMFESVPE 255
+ + LVDVGGG G L +I SKYP IK +NFDLP V+++AP +G+EHVGG+ F SVP+
Sbjct: 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDXFASVPQ 267
Query: 256 GDAILMKWILHCWDDDHCLRILKNCYKAVPGNGKVIVMNSIVPEIPEVSSAARETSLLDV 315
GDA ++K + H W D+ C+ L NC+KA+ NGKVI++ I+PE P S ++ S LD
Sbjct: 268 GDAXILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDN 327
Query: 316 LLMTRDGGGRERTKKEYTELAIAAGFKGINFASCVCN-LYIMEFFK 360
L GGRERT+K+Y +L+ +GF A N L + EF+K
Sbjct: 328 LXFIT-VGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVXEFYK 372
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 169/326 (51%), Gaps = 10/326 (3%)
Query: 39 MATQAAIQLGVFEIIAKAGE-LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVS 97
M+ + A+++ + II G+ +S + + LQ + K + R++R L + E ++
Sbjct: 31 MSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGN-VRRLMRYLAHNGFFEI-IT 88
Query: 98 GGERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWLGLKDAVMEGGIP-FNRVHG 156
E YAL S+ V D L + LD S+ LK + E + F G
Sbjct: 89 KEEESYALTVASELLVRGSD-LCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLG 147
Query: 157 MHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMIT 216
+++ NP +N ++++AM + S + + + F +E +VDVGGG G T +I
Sbjct: 148 SGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIIC 207
Query: 217 SKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMFESVPEGDAILMKWILHCWDDDHCLRI 276
+P++K + FD P VV++ + +VGG+MF S+P DA+L+K+ILH W D CLRI
Sbjct: 208 ETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRI 267
Query: 277 LKNCYKAVPGN---GKVIVMNSIVPEIPEVSSAARETSLLDVLLMTRDGGGRERTKKEYT 333
LK C +AV + GKV +++ ++ + + + + L+DV + + G+ER ++E+
Sbjct: 268 LKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLN--GKERNEEEWK 325
Query: 334 ELAIAAGFKGINFASCVCNLYIMEFF 359
+L I AGF+ + L ++E +
Sbjct: 326 KLFIEAGFQHYKISPLTGFLSLIEIY 351
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 165/313 (52%), Gaps = 13/313 (4%)
Query: 39 MATQAAIQLGVFEIIAKAGE-LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLEC--- 94
M+ + +I++ + II G+ ++ + + LQ + K + R++R L + E
Sbjct: 31 MSLKWSIEMNIPNIIHNHGKPITLSNLVSILQIPSTKVDN-VQRLMRYLAHNGFFEIITN 89
Query: 95 -SVSGGERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWLGLKDAVMEGGIPFNR 153
+ E YAL S+ V + L + LD S+ LK V E +
Sbjct: 90 QELENEEEAYALTVASELLVKGTE-LCLAPMVECVLDPTLSTSFHNLKKWVYEEDLTLFA 148
Query: 154 VH-GMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTL 212
V+ G ++E+ + NP +N Y++A+ + S + + + F+ +E +VDVGGG G T
Sbjct: 149 VNLGCDLWEFLNKNPEYNTLYNDALASDSKMINLAMKDCNLVFEGLESIVDVGGGNGTTG 208
Query: 213 SMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMFESVPEGDAILMKWILHCWDDDH 272
+I +P++ V FD P VV++ + +VGG+MF SVP+ DA+L+K +LH W D
Sbjct: 209 KIICETFPKLTCVVFDRPKVVENLCGSNNLTYVGGDMFISVPKADAVLLKAVLHDWTDKD 268
Query: 273 CLRILKNCYKAVPGN---GKVIVMNSIVPEIPEVSSAARETSLLDVLLMTRDGGGRERTK 329
C++ILK C +AV + GKVIV++ ++ E + + + L++V + + G+ER +
Sbjct: 269 CIKILKKCKEAVTSDGKRGKVIVIDMVINEKKDENQLTQIKLLMNVTISCVN--GKERNE 326
Query: 330 KEYTELAIAAGFK 342
+E+ +L I AGF+
Sbjct: 327 EEWKKLFIEAGFQ 339
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 160/321 (49%), Gaps = 10/321 (3%)
Query: 44 AIQLGVFEIIAKAGE-LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSGGERL 102
A++ + II G+ +S + + LQ + K + R+ R L + E ++ E
Sbjct: 36 AVEXNIPNIIQNHGKPISLSNLVSILQVPSSKIGNV-RRLXRYLAHNGFFEI-ITKEEES 93
Query: 103 YALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWLGLKDAVMEGGIP-FNRVHGMHIFE 161
YAL S+ V D L + LD S+ LK + E + F G ++
Sbjct: 94 YALTVASELLVRGSD-LCLAPXVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWD 152
Query: 162 YASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQ 221
+ NP +N ++++A + S + + + F +E +VDVGGG G T +I +P+
Sbjct: 153 FLDKNPEYNTSFNDAXASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPK 212
Query: 222 IKAVNFDLPHVVQDAPSYAGVEHVGGNMFESVPEGDAILMKWILHCWDDDHCLRILKNCY 281
+K + FD P VV++ + +VGG+ F S+P DA+L+K+ILH W D CLRILK C
Sbjct: 213 LKCIVFDRPQVVENLSGSNNLTYVGGDXFTSIPNADAVLLKYILHNWTDKDCLRILKKCK 272
Query: 282 KAVPGN---GKVIVMNSIVPEIPEVSSAARETSLLDVLLMTRDGGGRERTKKEYTELAIA 338
+AV + GKV +++ ++ + + + + L DV + G+ER ++E+ +L I
Sbjct: 273 EAVTNDGKRGKVTIIDXVIDKKKDENQVTQIKLLXDVNXACLN--GKERNEEEWKKLFIE 330
Query: 339 AGFKGINFASCVCNLYIMEFF 359
AGF+ + L ++E +
Sbjct: 331 AGFQHYKISPLTGFLSLIEIY 351
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 163/337 (48%), Gaps = 32/337 (9%)
Query: 27 HAMQLAMGVVLPMATQAAIQLGVFEIIAKAGE-LSAPEIAAQLQAQNVKAPMMLDRMLRL 85
H + V MA ++A++LG+ + I G+ ++ E+A+ L+ K + L R LRL
Sbjct: 9 HLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNI-LHRFLRL 67
Query: 86 LVSHRVLECSVSGGERL-------YALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWL 138
L + ++ G+ Y+L P SK +S K L + L ++ W
Sbjct: 68 LTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGK-PTCLSSIVKGALHPSSLDMWS 126
Query: 139 GLKDAVMEGGIPFNRVHGMHIFEYASGNPRFN------ETYHEAMFNHSTIAMERIL--- 189
K FN +FE A+G ++ E+ +MF + + R+
Sbjct: 127 SSKKW-------FNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLV 179
Query: 190 --EHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGG 247
E+ F+ +E LVDVGGG G +I +P +K FD P VV + + VGG
Sbjct: 180 LQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGG 239
Query: 248 NMFESVPEGDAILMKWILHCWDDDHCLRILKNCYKAVP---GNGKVIVMNSIVPEIPEVS 304
+MF+S+P DA+L+KW+LH W+D+ L+ILKN +A+ +GKVI+++ + E +
Sbjct: 240 DMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSD-D 298
Query: 305 SAARETSLLDVLLMTRDGGGRERTKKEYTELAIAAGF 341
E L L+M G+ERTK+E+ +L AGF
Sbjct: 299 RGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGF 335
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 163/337 (48%), Gaps = 32/337 (9%)
Query: 27 HAMQLAMGVVLPMATQAAIQLGVFEIIAKAGE-LSAPEIAAQLQAQNVKAPMMLDRMLRL 85
H + V MA ++A++LG+ + I G+ ++ E+A+ L+ K + L R LRL
Sbjct: 13 HLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNI-LHRFLRL 71
Query: 86 LVSHRVLECSVSGGERL-------YALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWL 138
L + ++ G+ Y+L P SK +S K L + L ++ W
Sbjct: 72 LTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGK-PTCLSSIVKGALHPSSLDMWS 130
Query: 139 GLKDAVMEGGIPFNRVHGMHIFEYASGNPRFN------ETYHEAMFNHSTIAMERIL--- 189
K FN +FE A+G ++ E+ +MF + + R+
Sbjct: 131 SSKKW-------FNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLV 183
Query: 190 --EHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGG 247
E+ F+ +E LVDVGGG G +I +P +K FD P VV + + VGG
Sbjct: 184 LQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGG 243
Query: 248 NMFESVPEGDAILMKWILHCWDDDHCLRILKNCYKAVP---GNGKVIVMNSIVPEIPEVS 304
+MF+S+P DA+L+KW+LH W+D+ L+ILKN +A+ +GKVI+++ + E +
Sbjct: 244 DMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSD-D 302
Query: 305 SAARETSLLDVLLMTRDGGGRERTKKEYTELAIAAGF 341
E L L+M G+ERTK+E+ +L AGF
Sbjct: 303 RGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGF 339
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 163/337 (48%), Gaps = 32/337 (9%)
Query: 27 HAMQLAMGVVLPMATQAAIQLGVFEIIAKAGE-LSAPEIAAQLQAQNVKAPMMLDRMLRL 85
H + V MA ++A++LG+ + I G+ ++ E+A+ L+ K + L R LRL
Sbjct: 12 HLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNI-LHRFLRL 70
Query: 86 LVSHRVLECSVSGGERL-------YALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWL 138
L + ++ G+ Y+L P SK +S K L + L ++ W
Sbjct: 71 LTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGK-PTCLSSIVKGALHPSSLDMWS 129
Query: 139 GLKDAVMEGGIPFNRVHGMHIFEYASGNPRFN------ETYHEAMFNHSTIAMERIL--- 189
K FN +FE A+G ++ E+ +MF + + R+
Sbjct: 130 SSKKW-------FNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLV 182
Query: 190 --EHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGG 247
E+ F+ +E LVDVGGG G +I +P +K FD P VV + + VGG
Sbjct: 183 LQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGG 242
Query: 248 NMFESVPEGDAILMKWILHCWDDDHCLRILKNCYKAVP---GNGKVIVMNSIVPEIPEVS 304
+MF+S+P DA+L+KW+LH W+D+ L+ILKN +A+ +GKVI+++ + E +
Sbjct: 243 DMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSD-D 301
Query: 305 SAARETSLLDVLLMTRDGGGRERTKKEYTELAIAAGF 341
E L L+M G+ERTK+E+ +L AGF
Sbjct: 302 RGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGF 338
>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
Length = 348
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 122/289 (42%), Gaps = 16/289 (5%)
Query: 59 LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSGGERLYALNPVSKYFVSNKDG 118
+ P A+L A L R+LRLL V+ S + +AL S+
Sbjct: 52 VDGPRTPAELAAATGTDADALRRVLRLLAVRDVVRES----DGRFALTDKGAALRSDSPV 107
Query: 119 ASLGHFMALPLDKVFMESWLGLKDAVMEGGIPFNRVHGMHIFEYASGNPRFNETYHEAMF 178
+ + D F + A+ F + G + Y G+ Y+E
Sbjct: 108 PARAGILXF-TDTXFWTXSHRVASALGPERPAFADIFGSSLDAYFDGDAEVEALYYEGXE 166
Query: 179 NHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQ---- 234
S A IL F + DVGGG G L + ++P ++ V D VV
Sbjct: 167 TVSA-AEHLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRL 225
Query: 235 DAPSYAGV-EHVGGNMFESVPEGDAILMKWILHCWDDDHCLRILKNCYKAVPGNGKVIVM 293
DAP AG + V G+ VP D ++K ILH W D+ +RIL NC + P +G+V+V+
Sbjct: 226 DAPDVAGRWKVVEGDFLREVPHADVHVLKRILHNWGDEDSVRILTNCRRVXPAHGRVLVI 285
Query: 294 NSIVPEIPEVSSAARETSLLDVLLMTRDGGGRERTKKEYTELAIAAGFK 342
+++VPE + + ++E + T G+ERT E L AAG +
Sbjct: 286 DAVVPEGND-AHQSKEXDFXXLAART----GQERTAAELEPLFTAAGLR 329
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 119/255 (46%), Gaps = 20/255 (7%)
Query: 98 GGERLYALNPVSKYFVSNKDG--ASLGHFMALPLDKVFMESWLGLKDAVMEGGIPFNRVH 155
G + L+A N +S + + A+ F A P +W L +V G F+ +
Sbjct: 105 GHDDLFAQNALSAVLLPDPASPVATDARFQAAPW---HWRAWEQLTHSVRTGEASFDVAN 161
Query: 156 GMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMI 215
G ++ +P+ E ++ A + S ++ Y+ F VD+GGG G + +
Sbjct: 162 GTSFWQLTHEDPKARELFNRAXGSVSLTEAGQVAAAYD-FSGAATAVDIGGGRGSLXAAV 220
Query: 216 TSKYPQIKAVNFDLPHVVQDAPSYAG-------VEHVGGNMFESVPEG-DAILMKWILHC 267
+P ++ + P V ++A E + G+ FE++P+G D L+K +LH
Sbjct: 221 LDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVYLIKHVLHD 280
Query: 268 WDDDHCLRILKNCYKAVPGNGKVIVMNSIVPEIPEVSSAARETSLLDVLLMTRDGGGRER 327
WDDD +RIL+ A + +++V+++++ E P S+ + LL ++ GG ER
Sbjct: 281 WDDDDVVRILRRIATAXKPDSRLLVIDNLIDERPAASTLFVDLLLLVLV------GGAER 334
Query: 328 TKKEYTELAIAAGFK 342
++ E+ L +G +
Sbjct: 335 SESEFAALLEKSGLR 349
>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam
pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam And
N-Acetylserotonin
Length = 353
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 145/328 (44%), Gaps = 25/328 (7%)
Query: 32 AMGVVLPMATQAAIQLGVFEIIAKA-GELSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHR 90
A G ++ AA +LGVF+++A+A G L +AA ++A ++LD + VS +
Sbjct: 16 ANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGTELLLD----ICVSLK 71
Query: 91 VLECSVSGGERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWLGLKDAVMEGGIP 150
+L+ GG+ Y +S +++ S + + + W L DAV EG
Sbjct: 72 LLKVETRGGKAFYRNTELSSDYLTTVSPTSQCSMLKY-MGRTSYRCWGHLADAVREGRNQ 130
Query: 151 FNRVHGMHIFE-----YASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVERLVDVG 205
+ G+ E Y S R + +A+ ++ +L ++ + D+G
Sbjct: 131 YLETFGVPAEELFTAIYRSEGERLQ--FMQALQEVWSVNGRSVLTAFD-LSVFPLMCDLG 187
Query: 206 GGFGVTLSMITSKYPQIKAVNFDLPHVVQDAP---SYAGVEHVG---GNMF-ESVPEGDA 258
GG G S YP K FD+P VV A S+ E + G+ F + +PE D
Sbjct: 188 GGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADL 247
Query: 259 ILMKWILHCWDDDHCLRILKNCYKAVPGNGKVIVMNSIVPEIPEVSSAARETSLLDVLLM 318
++ +LH W D C +L+ Y G ++V+ S++ E + S L++L+
Sbjct: 248 YILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYS-LNMLVQ 306
Query: 319 TRDGGGRERTKKEYTELAIAAGFKGINF 346
T G+ERT Y L +AGF+ F
Sbjct: 307 TE---GQERTPTHYHMLLSSAGFRDFQF 331
>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Methionine (Sam)
pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Homocystein (Sah)
Length = 374
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 144/319 (45%), Gaps = 26/319 (8%)
Query: 35 VVLPMATQAAIQLGVFEIIAKAGELSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLEC 94
+V PMA + A L + + + L+ + A L + P L R++R L VLE
Sbjct: 27 LVTPMALRVAATLRLVDHL-----LAGADTLAGLADRTDTHPQALSRLVRHLTVVGVLE- 80
Query: 95 SVSGGERL-YALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWL---GLKDAVMEGGIP 150
GGE+ L P ++ + DG L L+ + L GL D V G
Sbjct: 81 ---GGEKQGRPLRP-TRLGMLLADGHPAQQRAWLDLNGAVSHADLAFTGLLDVVRTGRPA 136
Query: 151 FNRVHGMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGV 210
+ +G +E S + +++ M +A E + Y+ + V ++DVGGG G
Sbjct: 137 YAGRYGRPFWEDLSADVALADSFDALMSCDEDLAYEAPADAYD-WSAVRHVLDVGGGNGG 195
Query: 211 TLSMITSKYPQIKAVNFDLPHVVQ-------DAPSYAGVEHVGGNMFESVP-EGDAILMK 262
L+ I + P ++ +L + DA V G+ F+ +P D +L+
Sbjct: 196 MLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLS 255
Query: 263 WILHCWDDDHCLRILKNCYKAVPGNGKVIVMNSIVPEIPEVSSAARETSLLDVLLMTRDG 322
++L W D+ L IL+ C +A+ G+++V++ ++ + ++LLD+ ++T
Sbjct: 256 FVLLNWSDEDALTILRGCVRALEPGGRLLVLDRA--DVEGDGADRFFSTLLDLRMLTF-M 312
Query: 323 GGRERTKKEYTELAIAAGF 341
GGR RT+ E +LA +AG
Sbjct: 313 GGRVRTRDEVVDLAGSAGL 331
>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
Length = 334
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 136/308 (44%), Gaps = 31/308 (10%)
Query: 44 AIQLGVFEIIAKAGELSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSGGERLY 103
A +LG+ ++I ++G S +AA + + + + R++RLLV+ + + G Y
Sbjct: 28 ATRLGLADLI-ESGIDSDETLAAAVGSDAER----IHRLMRLLVAFEIFQGDTRDG---Y 79
Query: 104 ALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWLGLKDAVMEGGIPFNRVHGMHIFEYA 163
A P S + + + +G+ M L + F +W +A++ G F G + Y
Sbjct: 80 ANTPTS-HLLRDVEGSF--RDMVLFYGEEFHAAWTPACEALLSGTPGFELAFGEDFYSYL 136
Query: 164 SGNPRFNETYHEAMFNHSTIAMERI--LEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQ 221
P + AM S +A I L + G VDVGGG G I P
Sbjct: 137 KRCPDAGRRFLLAM-KASNLAFHEIPRLLDFRG----RSFVDVGGGSGELTKAILQAEPS 191
Query: 222 IKAVNFDLPH---VVQDAPS--YAG--VEHVGGNMFESVPE-GDAILMKWILHCWDDDHC 273
+ V D V +D S AG V VGG+M + VP GD L+ I+ D+
Sbjct: 192 ARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLDEAAS 251
Query: 274 LRILKNCYKAVPGNGKVIVMNSIVPEIPEVSSAARETSLLDVLLMTRDGGGRERTKKEYT 333
LR+L NC +A+ G+G+V+V+ + S + + L DV L GR RT +E
Sbjct: 252 LRLLGNCREAMAGDGRVVVIERTI----SASEPSPMSVLWDVHLFMA-CAGRHRTTEEVV 306
Query: 334 ELAIAAGF 341
+L GF
Sbjct: 307 DLLGRGGF 314
>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
Length = 360
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 143/315 (45%), Gaps = 27/315 (8%)
Query: 38 PMATQAAIQLGVFE-IIAKAGELSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSV 96
PM + A L + + I+A A + A L A+ P L R++R LV+ +LE
Sbjct: 33 PMVVRTAATLRLVDHILAGARTVKA------LAARTDTRPEALLRLIRHLVAIGLLEEDA 86
Query: 97 SGGERLYALNPVSKYFVSNKDGASLG-HFMALPLDKVFMESWLGLKDAVMEGGIPFNRVH 155
G + V + + A H + + + + S+ L DA+ G + ++
Sbjct: 87 PGE---FVPTEVGELLADDHPAAQRAWHDLTQAVARADI-SFTRLPDAIRTGRPTYESIY 142
Query: 156 GMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMI 215
G +E +G P ++ + +A + Y+ + NV ++DVGGG G + I
Sbjct: 143 GKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYD-WTNVRHVLDVGGGKGGFAAAI 201
Query: 216 TSKYPQIKAVNFDLPHVVQDAPSYAG-------VEHVGGNMFESVP-EGDAILMKWILHC 267
+ P + A ++ V A SY V+ V G+ FE +P + DAI++ ++L
Sbjct: 202 ARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLLN 261
Query: 268 WDDDHCLRILKNCYKAVPGNGKVIVMNSIVPEIPEVSSAARETSL-LDVLLMTRDGGGRE 326
W D +RIL C +A+ G++++ ++ E S + T L L +L+ GG
Sbjct: 262 WPDHDAVRILTRCAEALEPGGRILIHER--DDLHENSFNEQFTELDLRMLVFL---GGAL 316
Query: 327 RTKKEYTELAIAAGF 341
RT++++ LA +AG
Sbjct: 317 RTREKWDGLAASAGL 331
>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDS|B Chain B, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDU|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With Sinefungin (Sfg)
Length = 374
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 140/319 (43%), Gaps = 26/319 (8%)
Query: 35 VVLPMATQAAIQLGVFEIIAKAGELSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLEC 94
+V P A + A L + + + L+ + A L + P L R++R L VLE
Sbjct: 27 LVTPXALRVAATLRLVDHL-----LAGADTLAGLADRTDTHPQALSRLVRHLTVVGVLE- 80
Query: 95 SVSGGERL-YALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWL---GLKDAVMEGGIP 150
GGE+ L P ++ DG L L+ + L GL D V G
Sbjct: 81 ---GGEKQGRPLRP-TRLGXLLADGHPAQQRAWLDLNGAVSHADLAFTGLLDVVRTGRPA 136
Query: 151 FNRVHGMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGV 210
+ +G +E S + +++ +A E + Y+ + V ++DVGGG G
Sbjct: 137 YAGRYGRPFWEDLSADVALADSFDALXSCDEDLAYEAPADAYD-WSAVRHVLDVGGGNGG 195
Query: 211 TLSMITSKYPQIKAVNFDLPHVVQ-------DAPSYAGVEHVGGNMFESVP-EGDAILMK 262
L+ I + P ++ +L + DA V G+ F+ +P D +L+
Sbjct: 196 XLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLS 255
Query: 263 WILHCWDDDHCLRILKNCYKAVPGNGKVIVMNSIVPEIPEVSSAARETSLLDVLLMTRDG 322
++L W D+ L IL+ C +A+ G+++V++ ++ + ++LLD+ +T
Sbjct: 256 FVLLNWSDEDALTILRGCVRALEPGGRLLVLDRA--DVEGDGADRFFSTLLDLRXLTF-X 312
Query: 323 GGRERTKKEYTELAIAAGF 341
GGR RT+ E +LA +AG
Sbjct: 313 GGRVRTRDEVVDLAGSAGL 331
>pdb|1X19|A Chain A, Crystal Structure Of Bchu Involved In Bacteriochlorophyll
C Biosynthesis
pdb|1X1A|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Methionine
pdb|1X1B|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine
pdb|1X1C|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn2+
pdb|1X1D|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn-Bacteriopheophorbide D
Length = 359
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 122/281 (43%), Gaps = 46/281 (16%)
Query: 42 QAAIQLGVFEIIAKAGELSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSGGER 101
+AAI+L +F +A+ P+ A L A P L+ +L L RV+ ++ G+
Sbjct: 49 KAAIELDLFSHMAEG-----PKDLATLAADTGSVPPRLEMLLETLRQMRVI--NLEDGK- 100
Query: 102 LYALNPVSKYFVS------NKDGASLGHFMALPLDKVFMESWLGLKDAV-----MEGGIP 150
++L + Y S N + MA D +M GL AV +G +P
Sbjct: 101 -WSLTEFADYMFSPTPKEPNLHQTPVAKAMAFLADDFYM----GLSQAVRGQKNFKGQVP 155
Query: 151 FNRVHGMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGV 210
+ V N F E + +++ A++ +LE + V++++DVGGG G
Sbjct: 156 YPPVT-------REDNLYFEEIHR----SNAKFAIQLLLEEAK-LDGVKKMIDVGGGIGD 203
Query: 211 TLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMF--------ESVPEGDAILMK 262
+ + +P++ + +LP + A + V M ES PE DA+L
Sbjct: 204 ISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFC 263
Query: 263 WILHCWDDDHCLRILKNCYKAVPGNGKVIVMNSIV--PEIP 301
IL+ ++ + K + A+ G++++++ ++ PE P
Sbjct: 264 RILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENP 304
>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
Length = 332
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 247 GNMFESVPEG-DAILMKWILHCWDDDHCLRILKNCYKAVPGNGKVIVMNSIVPEIPEVSS 305
G+ F+ +P G ++ +LH WDD + IL+ C +A G V+V+ ++ + E +
Sbjct: 226 GSFFDPLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD--EHAG 283
Query: 306 AARETSLLDVLLMTRDGGGRERTKKEYTELAIAAGFKGINFASCVCNLYIMEF 358
+ +L GG+ER+ E ELA AG + A + + I+E
Sbjct: 284 TGMDLRMLTYF------GGKERSLAELGELAAQAGLA-VRAAHPISYVSIVEM 329
>pdb|3DP7|A Chain A, Crystal Structure Of Sam-Dependent Methyltransferase From
Bacteroides Vulgatus Atcc 8482
pdb|3DP7|B Chain B, Crystal Structure Of Sam-Dependent Methyltransferase From
Bacteroides Vulgatus Atcc 8482
Length = 363
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 123/291 (42%), Gaps = 42/291 (14%)
Query: 28 AMQLAMGVVLPMATQAAIQLGVFEIIAKAGE-LSAPEIAAQLQAQNVKAPMMLDRMLRLL 86
A ++A G V+ ++ ++ G+F++++ E + EI+ + A ++L+ L
Sbjct: 19 AQEIAFGPVVFQVSRLMLKFGIFQLLSGKREGYTLQEISGRTGLTRYAAQVLLEA--SLT 76
Query: 87 VSHRVLECSVSGGERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWLGLKDAVME 146
+ +LE E Y L +F+ N A + M D V + L++A++
Sbjct: 77 IGTILLE------EDRYVLAKAG-WFLLNDKMARVN--MEFNHD-VNYQGLFHLEEALLN 126
Query: 147 GGIPFNRVHGM--HIFEYASGNPR--------FNETYHEAMFNHSTIAMERILEHYEGFQ 196
G +V G I+E S P F+ Y + F A+E + H+
Sbjct: 127 GRPEGLKVFGEWPTIYEGLSQLPEQVQKSWFGFDHFYSDQSFGK---ALEIVFSHHP--- 180
Query: 197 NVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQ----DAPSYAGVEHV---GGNM 249
+RL+D+GG G + +++ DLP ++ +G E + G N+
Sbjct: 181 --KRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANL 238
Query: 250 FES---VPEG-DAILMKWILHCWDDDHCLRILKNCYKAVPGNGKVIVMNSI 296
+ P G DA+ M L C+ ++ + IL +++ + KV +M ++
Sbjct: 239 LDRDVPFPTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETL 289
>pdb|2EX4|A Chain A, Crystal Structure Of Human Methyltransferase Ad-003 In
Complex With S-adenosyl-l-homocysteine
pdb|2EX4|B Chain B, Crystal Structure Of Human Methyltransferase Ad-003 In
Complex With S-adenosyl-l-homocysteine
Length = 241
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 11/132 (8%)
Query: 178 FNHSTIAMERILEHYEGFQNVERLVDVGGGFG-VTLSMITSKYPQIKAVNFDLPHVVQDA 236
N S ++R L +D G G G +T ++ + ++ V+ +VQ A
Sbjct: 60 INSSRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQ-A 118
Query: 237 PSYAGVEH--------VGGNMFESVPEG-DAILMKWILHCWDDDHCLRILKNCYKAVPGN 287
+Y G E G F P+ D I ++W++ D H L+ C ++ N
Sbjct: 119 KTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN 178
Query: 288 GKVIVMNSIVPE 299
G +++ +++ E
Sbjct: 179 GIIVIKDNMAQE 190
>pdb|2R3S|A Chain A, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
pdb|2R3S|B Chain B, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
Length = 335
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 124/318 (38%), Gaps = 38/318 (11%)
Query: 40 ATQAAIQLGVFEIIAKAGELSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSGG 99
A +AA++L VF I++ E S+ +A + Q +R R L + V+ +
Sbjct: 22 AIKAAVELNVFTAISQGIE-SSQSLAQKCQTS--------ERGXRXLCDYLVIIGFXTKQ 72
Query: 100 ERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWLGLKDAVMEGGIPFNRVHGMHI 159
Y L S F+ + +G + L + L AV++GG + +
Sbjct: 73 AEGYRLTSDSAXFLDRQSKFYVGDAIEFLLSPXITNGFNDLTAAVLKGGTAISSEGTL-- 130
Query: 160 FEYASGNP---RFNETYHEAMFNHSTIAMERILEHYEGFQNVE--RLVDVGGGFGVTLSM 214
+ +P +F + N + + + + E+ +E +++D+ G+
Sbjct: 131 ---SPEHPVWVQFAKAXSPXXANPAQLIAQLVNEN-----KIEPLKVLDISASHGLFGIA 182
Query: 215 ITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVG-------GNMFESVPEG---DAILMKWI 264
+ P + D V++ A A ++ V G+ FE V G D +L+
Sbjct: 183 VAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFE-VDYGNDYDLVLLPNF 241
Query: 265 LHCWDDDHCLRILKNCYKAVPGNGKVIVMNSIVPEIPEVSSAARETSLLDVLLMTRDGGG 324
LH +D C ++L+ A+ GKVIV + +P ++ + + ++ + G
Sbjct: 242 LHHFDVATCEQLLRKIKTALAVEGKVIVFD-FIPNSDRITPP--DAAAFSLVXLATTPNG 298
Query: 325 RERTKKEYTELAIAAGFK 342
T EY AGF
Sbjct: 299 DAYTFAEYESXFSNAGFS 316
>pdb|3MCZ|A Chain A, The Structure Of An O-Methyltransferase Family Protein
From Burkholderia Thailandensis.
pdb|3MCZ|B Chain B, The Structure Of An O-Methyltransferase Family Protein
From Burkholderia Thailandensis
Length = 352
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 195 FQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGG------- 247
F ++D+ GG G L+ + ++PQ+ +DLP A +GG
Sbjct: 177 FARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEK 236
Query: 248 NMFESVP-EG---DAILMKWILHCWDDDHCLRILKNCYKAVPGNGKVIVMN 294
N+ ++ EG D + + LH +D ++ + V G ++++
Sbjct: 237 NLLDARNFEGGAADVVXLNDCLHYFDAREAREVIGHAAGLVKPGGALLILT 287
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,561,274
Number of Sequences: 62578
Number of extensions: 450707
Number of successful extensions: 1117
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1056
Number of HSP's gapped (non-prelim): 24
length of query: 360
length of database: 14,973,337
effective HSP length: 100
effective length of query: 260
effective length of database: 8,715,537
effective search space: 2266039620
effective search space used: 2266039620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)