BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018146
(360 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O95433|AHSA1_HUMAN Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Homo
sapiens GN=AHSA1 PE=1 SV=1
Length = 338
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 180/359 (50%), Gaps = 25/359 (6%)
Query: 1 MAKYGEGDKRWIVEDRPDGANVHNWHWAETDCLEWSRNLLNGLLSDLTILDGEGNLFVKT 60
MAK+GEGD RWIVE+R D NV+NWHW E D WS + L L + + + EG +
Sbjct: 1 MAKWGEGDPRWIVEERADATNVNNWHWTERDASNWSTDKLKTLFLAVQVQNEEGK--CEV 58
Query: 61 KKIEKVEGEAYVNVRKGKIIPGYELNVTVSWEGEAKDGDGGSLLKVDGLVEIPYISDENA 120
++ K++GEA +N RKGK+I YE +V ++W G +K G ++ G VEIP +SDEN+
Sbjct: 59 TEVSKLDGEASINNRKGKLIFFYEWSVKLNWTGTSKSG-----VQYKGHVEIPNLSDENS 113
Query: 121 DENPEIRVSVKDEGPLGKRLKDAMWVKGKPVIEEKVKVYVEAMARGGPCKDELESKNVSS 180
+ EI VS+ + P L M +G ++ E + +Y+ + K E +
Sbjct: 114 VDEVEISVSLAKDEP-DTNLVALMKEEGVKLLREAMGIYISTL------KTEFTQGMILP 166
Query: 181 KSKNDNISSSSSSSTSYVSQTVKNDVVAEKKEVKKEVKKKEGFKNISLSEKFSCRAKDLY 240
+++ + + K A K + V K I+L E F ++LY
Sbjct: 167 TMNGESVDPVGQPALKTEERKAKP---APSKTQARPVGVKIPTCKITLKETFLTSPEELY 223
Query: 241 EILMDENRWKGFTQSNARISKEVNGEISIFDGSVTGKNLELQEGKLIVQKWRFGSWPDGI 300
+ + + FT + A + + G+ + DG+V+G+ +L K IV KWRF SWP+G
Sbjct: 224 RVFTTQELVQAFTHAPATLEADRGGKFHMVDGNVSGEFTDLVPEKHIVMKWRFKSWPEGH 283
Query: 301 ESTVRLVFDEPEPGVTVVKLTHNDVPEEDRYGNATVVENTERGWRDLIFQRIRAVFGFG 359
+T+ L F + + G T + + +P + E T +GW+ F+ I+ FG+G
Sbjct: 284 FATITLTFID-KNGETELCMEGRGIPAPEE-------ERTRQGWQRYYFEGIKQTFGYG 334
>sp|Q8BK64|AHSA1_MOUSE Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Mus
musculus GN=Ahsa1 PE=2 SV=2
Length = 338
Score = 169 bits (427), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 179/364 (49%), Gaps = 35/364 (9%)
Query: 1 MAKYGEGDKRWIVEDRPDGANVHNWHWAETDCLEWSRNLLNGLLSDLTILDGEGNLFVKT 60
MAK+GEGD RWIVE+R D NV+NWHW E D WS L L + + + EG V
Sbjct: 1 MAKWGEGDPRWIVEERADATNVNNWHWTERDASNWSTEKLKTLFLAVRVENEEGKCEV-- 58
Query: 61 KKIEKVEGEAYVNVRKGKIIPGYELNVTVSWEGEAKDGDGGSLLKVDGLVEIPYISDENA 120
++ K++GEA +N RKGK+I YE + ++W G +K G ++ G VEIP +SDEN+
Sbjct: 59 TEVNKLDGEASINNRKGKLIFFYEWTIKLNWTGTSKSG-----VQYKGHVEIPNLSDENS 113
Query: 121 DENPEIRVSVKDEGPLGKRLKDAMWVKGKPVIEEKVKVYVEAMARGGPCKDELESKNVSS 180
+ EI VS+ + P L M G ++ E V +Y+ + K E +
Sbjct: 114 VDEVEISVSLAKDEP-DTNLVALMKEDGVKLLREAVGIYISTL------KTEFTQGMI-- 164
Query: 181 KSKNDNISSSSSSSTSYVSQ-TVKNDVVAEKKEVKKEVKKKEGFK----NISLSEKFSCR 235
+ + + S V Q +K + K K K G K I+L E F
Sbjct: 165 ------LPTVNGESVDPVGQPALKTETCKAKSAPSKSQAKPVGVKIPTCKITLKETFLTS 218
Query: 236 AKDLYEILMDENRWKGFTQSNARISKEVNGEISIFDGSVTGKNLELQEGKLIVQKWRFGS 295
++LY + + + FT + A + + G+ + DG+VTG+ +L K I KWRF S
Sbjct: 219 PEELYRVFTTQELVQAFTHAPAALEADRGGKFHMVDGNVTGEFTDLVPEKHIAMKWRFKS 278
Query: 296 WPDGIESTVRLVFDEPEPGVTVVKLTHNDVPEEDRYGNATVVENTERGWRDLIFQRIRAV 355
WP+G +T+ L F + + G T + + +P + E T +GW+ F+ I+
Sbjct: 279 WPEGHFATITLTFID-KNGETELCMEGRGIPAPEE-------ERTRQGWQRYYFEGIKQT 330
Query: 356 FGFG 359
FG+G
Sbjct: 331 FGYG 334
>sp|Q55DB6|AHSA_DICDI Activator of 90 kDa heat shock protein ATPase homolog
OS=Dictyostelium discoideum GN=ahsa PE=2 SV=1
Length = 383
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 183/394 (46%), Gaps = 52/394 (13%)
Query: 1 MAKYGEGDKRWIVEDRPDGANVHNWHWAETDCLEWSRNLLNGLLSDLTILDGEGNLFVKT 60
MAK GEGD RWIVE+R DG NV+ WHW+E DCL WS+N + GL I + + F K
Sbjct: 1 MAKVGEGDPRWIVENREDGHNVNGWHWSEKDCLPWSKNTIGGLFDKKVIQETDEYTF-KI 59
Query: 61 KKIEKVEGEAYVNVRKGKIIPGYELNVTVSWE---------------------------- 92
V GE N RKGK I YEL+V ++WE
Sbjct: 60 SSTPVVSGECTANNRKGKTIFLYELDVKMNWEVVFKPKKVLPPPPTTKSKGAADDIDEED 119
Query: 93 --GEAKDGDGGSLLKVDGLVEIPYISDENADENPEIRVSVK-----DEGPLGKRLKDAMW 145
G+ + + G +PYISDEN DE P +R ++ DE + ++
Sbjct: 120 DDGKPAEPIITQKKTISGEFTVPYISDENGDEAPTVRYTINTTADNDETKQSINMVQSLL 179
Query: 146 -VKGKPVIEEKVKVYVEAMARGGPCKDELESKNVSSKSKNDNISSSSSSSTSYVSQTVKN 204
G P ++ + + +++ + K E SK +S+ +++++++T+ + K
Sbjct: 180 KSHGVPFVQSQCQEFIKLL------KKEFVSKKQVEQSQQQQTANTTTNTTTTTNTVPK- 232
Query: 205 DVVAEKKEVKKEVKKKEGFKNISLSEKFSCRAKDLYEILMDENRWKGFTQSNARISKEVN 264
V + KK K + L E+F C D Y++ ++ N+ + FTQS+ E
Sbjct: 233 -VTSSTVIFNSTPTKKPTTKTLKLKEEFQCSPMDAYDVFVNINKLRAFTQSDCTFENEEG 291
Query: 265 GEISIFDGSVTGKNLELQEGKLIVQKWRFGSWPDGIESTVRLVFDEPEPGVTVVKLTHND 324
G+ S++ GS+ G N L G IVQ WR +W G+ES V + F +T V++
Sbjct: 292 GKFSLYGGSIQGVNKTLSPGSKIVQTWRLDNWSKGVESQVTITFSVDGKPLTNVEIVQTG 351
Query: 325 VPEEDRYGNATVVENTERGWRDLIFQRIRAVFGF 358
+P ++ E TE GW+ I RI+ F +
Sbjct: 352 IPIDE-------FEKTEEGWKRNILDRIKHTFSY 378
>sp|Q8N9S3|AHSA2_MOUSE Activator of 90 kDa heat shock protein ATPase homolog 2 OS=Mus
musculus GN=Ahsa2 PE=2 SV=2
Length = 331
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 181/357 (50%), Gaps = 34/357 (9%)
Query: 1 MAKYGEGDKRWIVEDRPDGANVHNWHWAETDCLEWSRNLLNGLLSDLTILDGEGNLFVKT 60
MAK+G+GD RWIVE+R DG NV+NWHW E D WS+ L LL + + + G +
Sbjct: 1 MAKWGQGDPRWIVEEREDGTNVNNWHWTERDATIWSKGKLRELLVGIAMENEAGR--CEI 58
Query: 61 KKIEKVEGEAYVNVRKGKIIPGYELNVTVSWEGEAKDGDGGSLLKVDGLVEIPYISDENA 120
++++VEGEA N RKGK+I YE N+ ++W+G K+ K GL+EIP +S+EN
Sbjct: 59 SELKQVEGEASCNSRKGKLIFFYEWNIKLAWKGTVKESGA----KHKGLIEIPSLSEENE 114
Query: 121 DENPEIRVSVKDEGPLGKRLKDAMWVKGKPVIEEKVKVYVEAMARGGPCKDELESKNVSS 180
+ E+ VS K +G G+ LKD M G + E + Y++A+ L +K V++
Sbjct: 115 INDTEVNVS-KKKGD-GEILKDLMRTTGTAKVREALGEYLKALKTEFTTGMILPTKAVAT 172
Query: 181 KSKN-DNISSSSSSSTSYVSQTVKNDVVAEKKEVKKEVKKKEGFKNISLSEKFSCRAKDL 239
+ + + S V+ V+ VA + L+E F + L
Sbjct: 173 QELTLQRKLNENKLQASPVALGVRIPTVA-----------------LHLTELFDTTVEQL 215
Query: 240 YEILMDENRWKGFTQSNARISKEVNGEISIFDGSVTGKNLELQEGKLIVQKWRFGSWPDG 299
Y I + + F++S A + E G+ +FDG+++G+ +EL + I+ KWR +WP+
Sbjct: 216 YSIFTVKELVQKFSKSPAVLEAERGGKFQMFDGNISGEYVELVTNRKIIMKWRCRNWPEE 275
Query: 300 IESTVRLVFDEPEPGVTVVKLTHNDVPEEDRYGNATVVENTERGWRDLIFQRIRAVF 356
+TV L F P PG T ++L VP EN + W+ F+ I+ +
Sbjct: 276 HYATVELNFV-PAPGQTELQLDCKGVP-------VCKEENMKFCWQKQHFEEIKGLL 324
>sp|A6QQC0|AHSA2_BOVIN Activator of 90 kDa heat shock protein ATPase homolog 2 OS=Bos
taurus GN=AHSA2 PE=2 SV=1
Length = 260
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 140/274 (51%), Gaps = 29/274 (10%)
Query: 1 MAKYGEGDKRWIVEDRPDGANVHNWHWAETDCLEWSRNLLNGLLSDLTILDGEGNLFVKT 60
MAK+G+GD RWIVE+R DG NV+NWHW E D WS+ L LL +T+ + G +
Sbjct: 1 MAKWGQGDPRWIVEEREDGTNVNNWHWTERDATSWSKGRLRELLVGITVENEAGR--CEI 58
Query: 61 KKIEKVEGEAYVNVRKGKIIPGYELNVTVSWEGEAKDGDGGSLLKVDGLVEIPYISDENA 120
++++VEGEA + RKGK+I YE N+ + W+G ++ K GL+EIP +S+EN
Sbjct: 59 SELKQVEGEASCSSRKGKLIFFYEWNIKLGWKGIIRESGA----KHKGLIEIPSLSEENE 114
Query: 121 DENPEIRVSVKDEGPLGKRLKDAMWVKGKPVIEEKVKVYVEAMARGGPCKDELESKNVSS 180
++ E+ VS K +G G LKD M G + E + Y++A+ L +K +++
Sbjct: 115 VDDTEVNVS-KKKGD-GDILKDLMKTAGTAKVREALGDYLKALKTEFTMGMILPTKAMAA 172
Query: 181 KSKNDNISSSSSS----STSYVSQTVKNDVVAEKKEVKKEVKKKEGFKNISLSEKFSCRA 236
+ S ++ ++S V+ V+ VA + ++E F
Sbjct: 173 QELTVERKLSENALQIQASSRVALGVRIPTVA-----------------LHMTELFDTAI 215
Query: 237 KDLYEILMDENRWKGFTQSNARISKEVNGEISIF 270
+ LY I ++ + F++S A + E G+ +
Sbjct: 216 EQLYRIFTVKDLVQKFSKSPAVLEAEKGGKFQML 249
>sp|Q9P782|YNY8_SCHPO Uncharacterized protein C1711.08 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC1711.08 PE=2 SV=1
Length = 336
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 155/364 (42%), Gaps = 62/364 (17%)
Query: 21 NVHNWHWAETDCLEWSRNLLNGLLSDLTILDGEGNLFVKTKKIEKVEGEAYVNVRKGKII 80
N +NWHW DC WS N L I EG + ++ EG+ V++RK K+I
Sbjct: 7 NPNNWHWTSKDCRVWSHEYFNKELPK--IQASEGPTSARITQVNSCEGDVDVSMRKRKVI 64
Query: 81 PGYELNVTVSWEGEAKDGDGGSLLKVDGLVEIPYISDENADENP----EIRVSVKDEGPL 136
++L + + ++GE KDG ++ G + P +S + + +I + K++ P+
Sbjct: 65 TIFDLKIQMEFKGETKDG-----VEATGSITCPELSYDLGYSDYVFDIDIYSASKEKEPI 119
Query: 137 GKRLKDAMWVKGKPVIEEKVKVYVEA---------------MARGGPCKDELESKNVSSK 181
+ +++ + + + + +V ++ ARG P + N S
Sbjct: 120 KELVREKIIPQIRQLFSGFSQVLLQTHGDDVYLSTEEHNGNAARGLPVHSSFKQNNSSQT 179
Query: 182 SKN---DNISSSSSSSTSYVSQTVKNDVVAEKKEVKKEVKKKEGFKNISLSEKFSCRAKD 238
S N +++ S S S VS V +IS + F A +
Sbjct: 180 SSNKGTTTVAAGSGSDGSRVSAVVNT-------------------ADISENYTFDAPANE 220
Query: 239 LYEILMDENRWKGFTQSNARISKEVNGEISIFDGSVTGKNLELQEGKLIVQKWRFGSWPD 298
LY +D R ++++ ++ G S+F G+V GK L L+E K IVQ WR SWP
Sbjct: 221 LYATFLDPARVAAWSRAPPQLDVRPQGAFSLFHGNVVGKFLVLEENKKIVQTWRLSSWPT 280
Query: 299 GIESTVRLVFDEPEPGVTVVKLTHNDVP---EEDRYGNATVVENTERGWRDLIFQRIRAV 355
G + + FD+ + T +++ VP EE GN +D + I+ V
Sbjct: 281 GHYAEITFTFDQAD-SYTTLRMIMKGVPIGEEEVVQGNI----------QDYYIRPIKTV 329
Query: 356 FGFG 359
FGFG
Sbjct: 330 FGFG 333
>sp|Q719I0|AHSA2_HUMAN Activator of 90 kDa heat shock protein ATPase homolog 2 OS=Homo
sapiens GN=AHSA2 PE=2 SV=2
Length = 299
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 160/358 (44%), Gaps = 72/358 (20%)
Query: 1 MAKYGEGDKRWIVEDRPDGANVHNWHWAETDCLEWSRNLLNGLLSDLTILDGEGNLFVKT 60
MAK+G+G+ WIVE+R DG NV+NW W E D S+ LL + + + G +
Sbjct: 1 MAKWGQGNPHWIVEEREDGTNVNNWRWTERDATSLSKGKFQELLVGIVVENDAGR--GEI 58
Query: 61 KKIEKVEGEAYVNVRKGKIIPGYELNVTVSWEGEAKDGDGGSLLKVDGLVEIPYISDENA 120
++++VEGEA + RKGK+I YE N+ + W+G K+ S +K GL+EIP +S+EN
Sbjct: 59 NELKQVEGEASCSSRKGKLIFFYEWNIKLGWKGIVKE----SGVKHKGLIEIPNLSEENE 114
Query: 121 DENPEIRVSVKDEGPLGKRLKDAMWVKGKPVIEEKVKVYVEAMARGGPCKDELESKNVSS 180
++ E+ +S K +G G LKD M G + E + Y++A+ L +K +++
Sbjct: 115 VDDTEVSLS-KKKGD-GVILKDLMKTAGTAKVREALGDYLKALKTEFTTGMILPTKAMAT 172
Query: 181 KSKNDNISSSSSS----STSYVSQTVKNDVVAEKKEVKKEVKKKEGFKNISLSEKFSCRA 236
+ S ++ ++S V+ V+ VA + + E F
Sbjct: 173 QELTVKRKLSGNTLQVQASSPVALGVRIPTVA-----------------LHMMELFDTTV 215
Query: 237 KDLYEILMDENRWKGFTQSNARISKEVNGEISIFDGSVTGKNLELQEGKLIVQKWRFGSW 296
+ LY I FT KE+ K I+ KWR G+W
Sbjct: 216 EQLYSI---------FT------VKELT-------------------NKKIIMKWRCGNW 241
Query: 297 PDGIESTVRLVFDEPEPGVTVVKLTHNDVPEEDRYGNATVVENTERGWRDLIFQRIRA 354
P+ + V L F P G T ++L + + EN + W+ F+ I+
Sbjct: 242 PEEHYAMVALNFV-PTLGQTELQL--------KEFLSICKEENMKFCWQKQHFEEIKG 290
>sp|Q12449|AHA1_YEAST Hsp90 co-chaperone AHA1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=AHA1 PE=1 SV=1
Length = 350
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 155/368 (42%), Gaps = 54/368 (14%)
Query: 21 NVHNWHWAETDCLEWSRNLLNGLLSDLTILDGEGNLFVKTKKIEKVEGEAYVNVRKGKII 80
N +NWHW + +C+ W++ L + + + K K + +EG+ VN RKGK+I
Sbjct: 5 NPNNWHWVDKNCIGWAKEYFKQKLVGVEAGSVKDKKYAKIKSVSSIEGDCEVNQRKGKVI 64
Query: 81 PGYELNVTVSWEGEAKDGDGGSLLKVDGLVEIPYISDENADENPEIRVSVKDEG------ 134
++L +TV EG D GS L +G + +P ++ ++ + + +S+ E
Sbjct: 65 SLFDLKITVLIEGHV-DSKDGSALPFEGSINVPEVAFDSEASSYQFDISIFKETSELSEA 123
Query: 135 -PLGK-----RLKDAMWVKGKPVI----------EEKVKVYVEAMARGGPCKDELESKNV 178
PL + +L+ GK ++ E +VK RG E K+
Sbjct: 124 KPLIRSELLPKLRQIFQQFGKDLLATHGNDIQVPESQVK---SNYTRGNQKSSFTEIKDS 180
Query: 179 SSKSKNDNISSSSSSSTSYVSQTVKNDVVAEKKEVKKEVKKKEGFKNISLSEKFSCRAKD 238
+SK K + + SS+S+S VS T K +I L F+ + +
Sbjct: 181 ASKPKKNALPSSTSTSAP-VSSTNKVPQNGSGNST-----------SIYLEPTFNVPSSE 228
Query: 239 LYEILMDENRWKGFTQS----NARISKEVNGEISIFDGSVTGKNLELQEGKLIVQKWRFG 294
LYE +D+ R +T+S N+ E + +F G+V + + ++ K +V W+
Sbjct: 229 LYETFLDKQRILAWTRSAQFFNSGPKLETKEKFELFGGNVISELVSCEKDKKLVFHWKLK 288
Query: 295 SWPDGIESTVRLVFDEPEPGVTV---VKLTHNDVPEEDRYGNATVVENTERGWRDLIFQR 351
W ST+ + F E + VK T V EEDR + + +
Sbjct: 289 DWSAPFNSTIEMTFHESQEFHETKLQVKWTGIPVGEEDR---------VRANFEEYYVRS 339
Query: 352 IRAVFGFG 359
I+ FGFG
Sbjct: 340 IKLTFGFG 347
>sp|P53834|HCH1_YEAST Hsp90 co-chaperone HCH1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HCH1 PE=1 SV=1
Length = 153
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 21 NVHNWHWAETDCLEWSRNLLNGLLSDLTILDGEGNLFVKTKKIEKVEGEAYVNVRKGKII 80
N +NWHW + + L WS++ LNG L+ L+ + +G ++ ++ + G++ V+ RKGK I
Sbjct: 5 NPNNWHWVDKNTLPWSKDYLNGKLTSLSTVSSDGKSKIELTQVSSITGDSNVSQRKGKPI 64
Query: 81 PGYEL----NVTVSWEGEAKDGDGGSLLKVDGLVEIP-YISDEN 119
++L NV V+ KD + + DG +EIP ++ DE+
Sbjct: 65 CYFDLQLSMNVKVTNLDTNKDDEDDDGILADGKLEIPEFMHDES 108
>sp|P08291|POLG_CXB1J Genome polyprotein OS=Coxsackievirus B1 (strain Japan) PE=3 SV=3
Length = 2182
Score = 34.3 bits (77), Expect = 1.5, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 167 GPCKDELE------SKNVSSKSKN-DNISSSSSSSTSYVSQTVKNDVVAEKKEVKKEVKK 219
GP ++ +E + VSSK N ++I + +++ T + SQ V +D + + + VK +
Sbjct: 571 GPVEESVERAMVRVADTVSSKPTNSESIPALTAAETGHTSQVVPSDTM-QTRHVKNYHSR 629
Query: 220 KEGFKNISLSEKFSCRAKDLYEILMDENRWKGFTQ 254
E S E F CR+ +Y + N KG+ +
Sbjct: 630 SE-----SSIENFLCRSACVYYATYNNNSEKGYAE 659
>sp|Q94129|WRT4_CAEEL Warthog protein 4 OS=Caenorhabditis elegans GN=wrt-4 PE=2 SV=2
Length = 557
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 110 VEIPYISDENADENPEI--RVSVKDEGPLGKRLKDAMWVKGKPV---IEEKVKVYVEAMA 164
+PY DEN + NP RV++ D + R K M+ + K + I +K +Y +
Sbjct: 425 CSVPYSEDENINANPVPAERVNIGDCFYIAHRKKSQMYQRVKVLDINIVQKTGIYSPMTS 484
Query: 165 RGGPCKDELESKNVSSKSKNDNISSSSSSSTS 196
RG D + + S S+ DN S ++ T+
Sbjct: 485 RGHLLVDRIHA---SCHSETDNYSLQNTFFTN 513
>sp|Q8ECA2|FLGI_SHEON Flagellar P-ring protein OS=Shewanella oneidensis (strain MR-1)
GN=flgI PE=3 SV=1
Length = 363
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 79 IIPGYELNVTVSWEGEAKDGDGGSLLK 105
I PG EL+VTVS GEAK GG+LL+
Sbjct: 95 IKPGQELDVTVSSLGEAKSLRGGTLLQ 121
>sp|Q0HX20|FLGI_SHESR Flagellar P-ring protein OS=Shewanella sp. (strain MR-7) GN=flgI
PE=3 SV=1
Length = 363
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 79 IIPGYELNVTVSWEGEAKDGDGGSLLK 105
I PG EL+VTVS GEAK GG+LL+
Sbjct: 95 IKPGQELDVTVSSLGEAKSLRGGTLLQ 121
>sp|Q0HKS1|FLGI_SHESM Flagellar P-ring protein OS=Shewanella sp. (strain MR-4) GN=flgI
PE=3 SV=1
Length = 363
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 79 IIPGYELNVTVSWEGEAKDGDGGSLLK 105
I PG EL+VTVS GEAK GG+LL+
Sbjct: 95 IKPGQELDVTVSSLGEAKSLRGGTLLQ 121
>sp|C5B7B9|NAPA_EDWI9 Periplasmic nitrate reductase OS=Edwardsiella ictaluri (strain
93-146) GN=napA PE=3 SV=1
Length = 829
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 45 SDLTILDGEGNLFVKTKKIEKVEGEAYVNVRKGKIIPGYELNVTVSWEGEAKD 97
SDL IL+ N ++ +++ + +VN+RKG GY L T E AK+
Sbjct: 264 SDLVILNYIANYIIQNNAVDQAFMDKHVNIRKGATDIGYGLRPTDPLEKAAKN 316
>sp|Q9US12|YK66_SCHPO Putative zinc metalloproteinase C607.06c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC607.06c PE=2 SV=1
Length = 612
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 12/126 (9%)
Query: 186 NISSSSSSSTSYVSQTVKNDVVAEKKEVKKEVKKKEGFKNISLSEKFS---CRAKDLYEI 242
N SS+ +S+ K + E+ K K + F + SE++ C K+L I
Sbjct: 437 NASSNQDYRVRVLSRNFKCIDLNNVPEIIKNAKVESSFGTVYRSERYGLRGCNGKELSNI 496
Query: 243 LMDENRWKGFTQSNARISKEVNG-EISIFDGSV-------TGKNLELQEGKLIVQKWRFG 294
L+ ++K T+ ++G E+ D SV + + E+Q +++ + R G
Sbjct: 497 LIAPEKFKP-TKIRVHCGLALDGIEVFFGDESVLLGNRGGSPHDFEIQGSQIVGFQIRCG 555
Query: 295 SWPDGI 300
+W DGI
Sbjct: 556 AWVDGI 561
>sp|A1SWQ0|NAPA_PSYIN Periplasmic nitrate reductase OS=Psychromonas ingrahamii (strain
37) GN=napA PE=3 SV=1
Length = 831
Score = 32.3 bits (72), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 41 NGLL----SDLTILDGEGNLFVKTKKIEKVEGEAYVNVRKGKIIPGYELNVTVSWEGEAK 96
NG++ SDL IL+ N ++ ++K E + N RKG GY L T + A+
Sbjct: 257 NGMIFTPQSDLAILNFIANYIIQNDAVDKDFIEKHTNFRKGVTDIGYGLRPTDPLQKAAE 316
Query: 97 DGDGGS 102
+ D G+
Sbjct: 317 NPDSGA 322
>sp|E1WAU5|TAMB_SALTS Translocation and assembly module TamB OS=Salmonella typhimurium
(strain SL1344) GN=tamB PE=3 SV=1
Length = 1259
Score = 31.6 bits (70), Expect = 9.3, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 109 LVEIPYISDENADE--NPEIRVSVKDEGPLGKRLKDAMWVKGKPVIEEKVKVYV 160
L+ +P ++D +E P+I DE PLG+ LKD KPV+ E V++
Sbjct: 179 LIALPKVADVAQEEVVEPKIEKPQPDEKPLGETLKDLF---AKPVMPEMTDVHL 229
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.133 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 145,687,105
Number of Sequences: 539616
Number of extensions: 6618082
Number of successful extensions: 23688
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 22903
Number of HSP's gapped (non-prelim): 613
length of query: 360
length of database: 191,569,459
effective HSP length: 119
effective length of query: 241
effective length of database: 127,355,155
effective search space: 30692592355
effective search space used: 30692592355
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)