Query 018147
Match_columns 360
No_of_seqs 367 out of 2764
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 06:32:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018147.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018147hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02231 alanine transaminase 100.0 4.2E-62 9.2E-67 491.4 32.4 355 1-360 1-363 (534)
2 KOG0258 Alanine aminotransfera 100.0 9.7E-63 2.1E-67 453.9 24.4 300 50-356 2-302 (475)
3 PTZ00377 alanine aminotransfer 100.0 3.2E-53 7E-58 424.7 32.2 307 53-360 2-311 (481)
4 PLN02368 alanine transaminase 100.0 1.9E-50 4.2E-55 395.3 31.3 297 54-360 4-303 (407)
5 COG0436 Aspartate/tyrosine/aro 100.0 2.9E-44 6.2E-49 349.9 25.7 240 67-360 5-247 (393)
6 PRK13355 bifunctional HTH-doma 100.0 3.6E-41 7.9E-46 340.4 25.8 246 60-360 118-364 (517)
7 KOG0257 Kynurenine aminotransf 100.0 2.4E-41 5.1E-46 316.8 19.9 239 62-360 9-256 (420)
8 PRK07366 succinyldiaminopimela 100.0 1.4E-39 2.9E-44 318.0 25.1 245 62-360 4-250 (388)
9 PRK09147 succinyldiaminopimela 100.0 3.7E-39 8.1E-44 315.7 26.5 249 62-360 2-256 (396)
10 PRK07681 aspartate aminotransf 100.0 5E-39 1.1E-43 315.1 24.9 244 61-360 5-250 (399)
11 PRK06855 aminotransferase; Val 100.0 1.2E-38 2.6E-43 315.4 24.9 221 97-360 32-254 (433)
12 TIGR03538 DapC_gpp succinyldia 100.0 2.7E-38 5.9E-43 309.3 26.1 249 62-360 1-255 (393)
13 PLN00175 aminotransferase fami 100.0 3.5E-38 7.7E-43 310.3 26.0 237 61-360 32-270 (413)
14 PLN00143 tyrosine/nicotianamin 100.0 3.1E-38 6.8E-43 310.4 25.3 221 97-360 32-253 (409)
15 PRK08636 aspartate aminotransf 100.0 4.7E-38 1E-42 308.7 25.9 246 66-360 11-259 (403)
16 PRK08960 hypothetical protein; 100.0 3.5E-38 7.6E-43 308.0 24.6 238 63-360 7-245 (387)
17 PLN02187 rooty/superroot1 100.0 4.5E-38 9.7E-43 313.3 25.7 221 97-360 66-287 (462)
18 PRK08068 transaminase; Reviewe 100.0 3.8E-38 8.2E-43 307.9 24.6 243 63-360 7-251 (389)
19 PRK06207 aspartate aminotransf 100.0 7.6E-38 1.6E-42 307.3 25.7 239 74-360 19-262 (405)
20 PLN00145 tyrosine/nicotianamin 100.0 7.3E-38 1.6E-42 309.4 25.6 240 71-360 33-273 (430)
21 PRK05942 aspartate aminotransf 100.0 8.9E-38 1.9E-42 305.8 25.4 242 64-360 11-254 (394)
22 PRK06348 aspartate aminotransf 100.0 8.1E-38 1.8E-42 305.1 24.5 216 97-360 29-245 (384)
23 TIGR03540 DapC_direct LL-diami 100.0 9.4E-38 2E-42 304.4 24.1 242 64-360 5-248 (383)
24 PRK09276 LL-diaminopimelate am 100.0 1.3E-37 2.8E-42 303.7 24.7 244 62-360 5-250 (385)
25 KOG0259 Tyrosine aminotransfer 100.0 1.2E-37 2.5E-42 287.6 22.5 221 97-360 61-282 (447)
26 PRK09265 aminotransferase AlaT 100.0 2.9E-37 6.3E-42 303.1 24.6 244 62-360 7-251 (404)
27 PRK06290 aspartate aminotransf 100.0 3.5E-37 7.5E-42 302.9 24.9 217 96-360 43-262 (410)
28 PLN02656 tyrosine transaminase 100.0 3.8E-37 8.3E-42 302.7 25.0 221 97-360 31-252 (409)
29 PRK07590 L,L-diaminopimelate a 100.0 3.2E-37 6.9E-42 303.3 23.4 245 59-360 2-260 (409)
30 PRK07337 aminotransferase; Val 100.0 8.4E-37 1.8E-41 298.3 24.2 238 63-360 5-243 (388)
31 PRK09148 aminotransferase; Val 100.0 1.1E-36 2.5E-41 299.0 24.7 241 65-360 7-249 (405)
32 PRK08912 hypothetical protein; 100.0 1.8E-36 3.8E-41 295.9 24.4 215 98-360 27-243 (387)
33 PRK09257 aromatic amino acid a 100.0 5.7E-37 1.2E-41 300.3 20.1 207 142-360 47-257 (396)
34 PRK06107 aspartate aminotransf 100.0 3.1E-36 6.7E-41 295.7 24.7 218 97-360 33-252 (402)
35 PTZ00376 aspartate aminotransf 100.0 8.4E-37 1.8E-41 299.9 20.1 192 159-360 64-262 (404)
36 PRK05839 hypothetical protein; 100.0 5.4E-36 1.2E-40 291.3 25.1 217 97-360 24-243 (374)
37 PTZ00433 tyrosine aminotransfe 100.0 3.3E-36 7.1E-41 296.4 23.0 221 97-360 33-260 (412)
38 PRK12414 putative aminotransfe 100.0 6.8E-36 1.5E-40 291.5 24.2 216 97-360 29-246 (384)
39 PLN02450 1-aminocyclopropane-1 100.0 3.3E-36 7.1E-41 300.4 22.2 198 160-360 79-283 (468)
40 PRK07682 hypothetical protein; 100.0 8.2E-36 1.8E-40 290.3 23.7 215 98-360 21-237 (378)
41 TIGR03537 DapC succinyldiamino 100.0 1E-35 2.3E-40 286.7 24.0 211 99-360 2-217 (350)
42 PRK08361 aspartate aminotransf 100.0 1.3E-35 2.9E-40 290.1 24.2 215 97-360 33-248 (391)
43 PLN02607 1-aminocyclopropane-1 100.0 1.1E-35 2.3E-40 294.8 23.8 198 160-360 88-290 (447)
44 PRK08363 alanine aminotransfer 100.0 1.2E-35 2.5E-40 291.2 23.5 218 97-360 30-248 (398)
45 PRK07550 hypothetical protein; 100.0 2.2E-35 4.7E-40 288.1 25.2 218 97-360 29-247 (386)
46 PRK07777 aminotransferase; Val 100.0 2.2E-35 4.8E-40 288.1 25.2 216 98-360 25-243 (387)
47 PRK06108 aspartate aminotransf 100.0 1.7E-35 3.8E-40 288.0 24.3 218 97-360 24-243 (382)
48 PRK05764 aspartate aminotransf 100.0 2.1E-35 4.5E-40 288.7 24.7 245 61-360 4-249 (393)
49 PRK07683 aminotransferase A; V 100.0 3.9E-35 8.5E-40 286.5 24.5 215 97-360 28-244 (387)
50 PRK09082 methionine aminotrans 100.0 3.7E-35 8E-40 286.6 24.1 216 97-360 30-247 (386)
51 PLN02376 1-aminocyclopropane-1 100.0 1.3E-35 2.8E-40 297.5 21.0 199 159-360 86-290 (496)
52 TIGR01264 tyr_amTase_E tyrosin 100.0 3.7E-35 8E-40 287.9 23.5 221 96-360 30-251 (401)
53 COG1167 ARO8 Transcriptional r 100.0 3.7E-35 8E-40 291.7 23.0 216 128-360 89-309 (459)
54 PRK07324 transaminase; Validat 100.0 1.8E-35 3.9E-40 287.5 19.0 207 97-360 26-233 (373)
55 PRK07309 aromatic amino acid a 100.0 1.3E-34 2.9E-39 283.1 25.3 217 97-360 30-248 (391)
56 PRK05957 aspartate aminotransf 100.0 1.4E-34 3E-39 282.8 24.4 215 98-360 28-244 (389)
57 PRK06836 aspartate aminotransf 100.0 3.4E-34 7.4E-39 280.5 25.7 216 97-360 33-255 (394)
58 TIGR01265 tyr_nico_aTase tyros 100.0 3.3E-34 7.2E-39 281.4 25.6 221 97-360 31-252 (403)
59 PRK07568 aspartate aminotransf 100.0 3E-34 6.5E-39 280.9 24.6 215 97-360 30-246 (397)
60 PRK08175 aminotransferase; Val 100.0 3.4E-34 7.3E-39 280.6 24.7 218 97-360 29-248 (395)
61 PRK09275 aspartate aminotransf 100.0 3.4E-34 7.4E-39 286.2 20.7 196 139-360 113-322 (527)
62 TIGR03542 DAPAT_plant LL-diami 100.0 6.7E-34 1.5E-38 279.1 22.0 240 62-360 4-257 (402)
63 PLN02397 aspartate transaminas 100.0 8.8E-34 1.9E-38 279.9 22.5 190 160-360 84-280 (423)
64 PRK15481 transcriptional regul 100.0 4.5E-34 9.7E-39 282.8 19.0 190 142-360 101-292 (431)
65 COG1168 MalY Bifunctional PLP- 100.0 2.3E-33 5E-38 260.7 22.2 216 97-359 25-242 (388)
66 PRK01533 histidinol-phosphate 100.0 1E-33 2.2E-38 274.4 19.9 204 97-360 29-233 (366)
67 PRK03317 histidinol-phosphate 100.0 1.4E-33 3E-38 273.7 20.7 200 139-360 39-239 (368)
68 PF00155 Aminotran_1_2: Aminot 100.0 5.9E-34 1.3E-38 275.2 17.9 227 98-360 2-232 (363)
69 PRK02610 histidinol-phosphate 100.0 2.4E-33 5.1E-38 272.7 22.0 201 139-360 41-245 (374)
70 PRK06358 threonine-phosphate d 100.0 7.5E-33 1.6E-37 267.3 23.1 192 139-360 32-224 (354)
71 TIGR03801 asp_4_decarbox aspar 100.0 4.6E-33 1E-37 277.7 20.2 195 141-360 108-321 (521)
72 PRK14809 histidinol-phosphate 100.0 6E-33 1.3E-37 268.2 20.4 203 97-360 30-233 (357)
73 PRK05166 histidinol-phosphate 100.0 9.4E-33 2E-37 268.2 20.1 206 97-360 36-242 (371)
74 TIGR03539 DapC_actino succinyl 100.0 3.3E-32 7.1E-37 263.1 21.1 224 69-360 2-228 (357)
75 PRK08056 threonine-phosphate d 100.0 2.1E-32 4.5E-37 264.4 19.4 203 97-360 20-223 (356)
76 PRK08153 histidinol-phosphate 100.0 3.2E-32 6.9E-37 264.4 19.2 201 98-360 33-234 (369)
77 PRK07865 N-succinyldiaminopime 100.0 1.1E-31 2.3E-36 260.1 22.1 205 97-360 27-234 (364)
78 PRK08637 hypothetical protein; 100.0 1E-31 2.2E-36 262.5 21.7 208 144-360 21-238 (388)
79 PRK09440 avtA valine--pyruvate 100.0 4.1E-32 9E-37 267.5 19.0 218 97-360 30-259 (416)
80 PLN02672 methionine S-methyltr 100.0 1.9E-31 4.2E-36 281.4 24.3 208 139-360 710-921 (1082)
81 PRK03158 histidinol-phosphate 100.0 1E-31 2.2E-36 259.7 20.2 204 97-360 29-233 (359)
82 PRK09105 putative aminotransfe 100.0 1.5E-31 3.2E-36 259.7 18.8 188 139-360 56-244 (370)
83 PLN03026 histidinol-phosphate 100.0 2.6E-31 5.6E-36 258.9 19.8 199 97-360 52-251 (380)
84 PRK05387 histidinol-phosphate 100.0 2.7E-31 5.9E-36 256.0 19.2 196 98-360 25-221 (353)
85 PRK07392 threonine-phosphate d 100.0 7.2E-31 1.6E-35 254.0 21.7 189 139-360 35-227 (360)
86 PRK06225 aspartate aminotransf 100.0 7.6E-31 1.6E-35 255.6 21.5 207 97-360 28-236 (380)
87 PRK04870 histidinol-phosphate 100.0 9E-31 1.9E-35 252.9 20.2 202 97-360 26-228 (356)
88 COG0079 HisC Histidinol-phosph 100.0 1E-30 2.2E-35 251.0 20.3 198 129-360 23-223 (356)
89 PRK14807 histidinol-phosphate 100.0 1.7E-30 3.6E-35 250.7 21.3 189 139-360 35-224 (351)
90 PRK03321 putative aminotransfe 100.0 1E-30 2.2E-35 252.1 19.5 192 139-360 35-227 (352)
91 PRK02731 histidinol-phosphate 100.0 5.1E-30 1.1E-34 248.5 20.2 204 97-360 32-236 (367)
92 PRK03967 histidinol-phosphate 100.0 5.2E-30 1.1E-34 245.9 20.1 184 139-360 31-215 (337)
93 KOG0256 1-aminocyclopropane-1- 100.0 4.6E-30 1E-34 239.3 17.8 196 160-359 114-313 (471)
94 PRK01688 histidinol-phosphate 100.0 2.1E-30 4.6E-35 249.9 16.0 172 160-360 51-224 (351)
95 PRK14808 histidinol-phosphate 100.0 7.8E-30 1.7E-34 244.5 18.5 194 97-360 19-213 (335)
96 TIGR01141 hisC histidinol-phos 100.0 7.8E-30 1.7E-34 245.2 18.3 202 97-360 19-221 (346)
97 PRK04781 histidinol-phosphate 100.0 6.2E-30 1.3E-34 247.9 17.7 176 160-360 53-231 (364)
98 PRK08354 putative aminotransfe 100.0 1.8E-29 3.9E-34 239.5 20.1 171 141-360 22-193 (311)
99 PRK06425 histidinol-phosphate 100.0 1.8E-29 3.8E-34 241.7 16.9 170 160-360 34-204 (332)
100 PRK04635 histidinol-phosphate 100.0 1.3E-29 2.8E-34 244.8 15.9 170 160-360 54-225 (354)
101 PRK00950 histidinol-phosphate 100.0 5.9E-29 1.3E-33 240.4 20.3 199 97-360 34-234 (361)
102 PRK07908 hypothetical protein; 100.0 1.4E-28 3E-33 237.0 20.3 180 139-360 35-215 (349)
103 PRK05664 threonine-phosphate d 100.0 3.7E-28 7.9E-33 232.5 18.1 156 163-360 47-203 (330)
104 PRK06959 putative threonine-ph 100.0 1.5E-27 3.3E-32 229.0 16.7 160 161-360 49-209 (339)
105 TIGR01140 L_thr_O3P_dcar L-thr 99.9 5.1E-27 1.1E-31 224.5 18.0 164 160-360 41-205 (330)
106 PRK13238 tnaA tryptophanase/L- 99.9 8E-26 1.7E-30 224.5 21.4 201 67-318 15-228 (460)
107 COG1448 TyrB Aspartate/tyrosin 99.9 1.8E-25 3.9E-30 208.3 18.6 244 67-359 4-256 (396)
108 KOG0634 Aromatic amino acid am 99.9 1.1E-25 2.4E-30 211.6 15.9 198 159-360 92-305 (472)
109 cd00609 AAT_like Aspartate ami 99.9 5.1E-24 1.1E-28 203.5 21.6 204 139-360 11-215 (350)
110 cd00617 Tnase_like Tryptophana 99.9 1.5E-21 3.3E-26 191.8 22.0 183 79-312 2-195 (431)
111 PRK06939 2-amino-3-ketobutyrat 99.9 2.6E-21 5.6E-26 189.1 22.1 198 139-360 56-253 (397)
112 TIGR01822 2am3keto_CoA 2-amino 99.9 6.2E-21 1.3E-25 186.5 22.6 191 139-360 52-249 (393)
113 COG3977 Alanine-alpha-ketoisov 99.9 2.2E-21 4.7E-26 174.9 14.7 242 70-359 3-258 (417)
114 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 4.7E-20 1E-24 178.5 22.4 195 139-360 12-211 (361)
115 TIGR03392 FeS_syn_CsdA cystein 99.9 3.2E-20 7E-25 181.9 21.4 187 139-360 27-228 (398)
116 TIGR01825 gly_Cac_T_rel pyrido 99.9 4.7E-20 1E-24 179.7 21.5 195 139-360 47-241 (385)
117 PRK07049 methionine gamma-lyas 99.9 2.5E-20 5.4E-25 184.0 18.8 168 160-360 77-253 (427)
118 TIGR00858 bioF 8-amino-7-oxono 99.8 1.2E-19 2.6E-24 174.6 22.4 187 140-354 31-221 (360)
119 KOG0633 Histidinol phosphate a 99.8 1.3E-21 2.7E-26 173.3 7.6 172 162-360 65-238 (375)
120 PRK10874 cysteine sulfinate de 99.8 9.5E-20 2.1E-24 178.7 21.2 184 139-354 30-226 (401)
121 TIGR01976 am_tr_V_VC1184 cyste 99.8 2.7E-19 5.7E-24 175.2 20.7 188 139-360 28-226 (397)
122 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 6.6E-19 1.4E-23 172.1 22.7 196 138-360 30-230 (387)
123 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 1.1E-18 2.3E-23 169.6 23.3 165 169-360 53-218 (370)
124 cd00613 GDC-P Glycine cleavage 99.8 3.9E-19 8.4E-24 174.0 20.3 200 97-360 20-235 (398)
125 cd06502 TA_like Low-specificit 99.8 1.4E-19 3E-24 173.1 16.6 190 136-353 6-199 (338)
126 PRK10534 L-threonine aldolase; 99.8 9.9E-20 2.1E-24 174.2 15.0 165 130-313 1-170 (333)
127 PLN02721 threonine aldolase 99.8 2.6E-19 5.5E-24 172.3 17.7 160 140-314 18-182 (353)
128 PLN02242 methionine gamma-lyas 99.8 2E-19 4.3E-24 177.1 16.2 151 169-360 78-235 (418)
129 PRK09295 bifunctional cysteine 99.8 7.5E-19 1.6E-23 172.7 20.0 198 130-360 24-235 (406)
130 cd06454 KBL_like KBL_like; thi 99.8 1E-18 2.2E-23 167.7 20.3 201 130-354 3-206 (349)
131 cd06450 DOPA_deC_like DOPA dec 99.8 7.6E-19 1.7E-23 168.5 19.1 187 160-360 27-226 (345)
132 KOG1411 Aspartate aminotransfe 99.8 1.5E-19 3.3E-24 165.8 13.0 254 60-359 23-283 (427)
133 PRK06234 methionine gamma-lyas 99.8 4.9E-19 1.1E-23 173.7 17.6 155 165-360 62-224 (400)
134 KOG1412 Aspartate aminotransfe 99.8 8E-19 1.7E-23 159.0 16.3 226 97-359 30-263 (410)
135 TIGR02080 O_succ_thio_ly O-suc 99.8 6.9E-19 1.5E-23 171.5 17.0 159 160-360 45-209 (382)
136 TIGR01979 sufS cysteine desulf 99.8 2.7E-18 5.9E-23 168.4 20.6 184 139-354 29-225 (403)
137 PRK08133 O-succinylhomoserine 99.8 1.3E-18 2.8E-23 170.1 17.9 151 169-360 63-218 (390)
138 cd06453 SufS_like Cysteine des 99.8 1.4E-18 3E-23 168.7 17.7 189 139-360 10-210 (373)
139 PLN02855 Bifunctional selenocy 99.8 3.6E-18 7.9E-23 168.8 19.7 188 139-360 43-244 (424)
140 cd06451 AGAT_like Alanine-glyo 99.8 2.7E-18 5.8E-23 165.6 17.9 193 132-360 2-196 (356)
141 cd00615 Orn_deC_like Ornithine 99.8 2.8E-18 6.1E-23 161.6 17.2 163 169-359 61-228 (294)
142 TIGR00707 argD acetylornithine 99.8 3.1E-18 6.7E-23 166.6 17.8 193 140-360 44-249 (379)
143 cd00378 SHMT Serine-glycine hy 99.8 1.7E-18 3.7E-23 169.8 16.0 196 137-360 28-233 (402)
144 TIGR01437 selA_rel uncharacter 99.8 1.1E-17 2.3E-22 162.2 21.2 174 140-360 25-218 (363)
145 PRK05958 8-amino-7-oxononanoat 99.8 1.3E-17 2.9E-22 162.1 21.9 202 128-354 39-243 (385)
146 PRK02948 cysteine desulfurase; 99.8 4.6E-18 9.9E-23 165.7 18.6 185 138-354 10-204 (381)
147 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 2.6E-18 5.7E-23 169.4 16.7 158 161-360 52-214 (418)
148 PRK02627 acetylornithine amino 99.8 2.8E-18 6.2E-23 167.9 16.8 203 127-360 38-261 (396)
149 TIGR01977 am_tr_V_EF2568 cyste 99.8 7.9E-18 1.7E-22 163.5 19.8 161 137-314 9-178 (376)
150 PRK08045 cystathionine gamma-s 99.8 3.8E-18 8.2E-23 166.4 17.5 159 160-360 46-210 (386)
151 TIGR02379 ECA_wecE TDP-4-keto- 99.8 6.6E-18 1.4E-22 164.3 18.6 153 140-319 9-163 (376)
152 PRK07504 O-succinylhomoserine 99.8 6.1E-18 1.3E-22 165.8 17.9 159 160-360 59-222 (398)
153 PRK07179 hypothetical protein; 99.8 1.9E-17 4.2E-22 162.8 21.2 198 130-360 56-259 (407)
154 PRK06460 hypothetical protein; 99.8 4E-18 8.6E-23 165.9 16.1 153 167-360 45-203 (376)
155 PRK07503 methionine gamma-lyas 99.8 5.3E-18 1.1E-22 166.5 17.0 158 161-360 60-223 (403)
156 PRK08861 cystathionine gamma-s 99.8 6.6E-18 1.4E-22 164.6 17.3 159 160-360 47-211 (388)
157 PRK08249 cystathionine gamma-s 99.8 6.5E-18 1.4E-22 165.4 16.6 155 162-358 60-219 (398)
158 TIGR03576 pyridox_MJ0158 pyrid 99.8 2.3E-17 5.1E-22 158.7 19.7 176 141-360 35-213 (346)
159 PRK03244 argD acetylornithine 99.8 1.1E-17 2.5E-22 163.9 17.5 208 127-360 42-262 (398)
160 PLN02822 serine palmitoyltrans 99.8 4.6E-17 1E-21 163.1 21.6 207 126-357 107-325 (481)
161 PRK08247 cystathionine gamma-s 99.8 1.1E-17 2.3E-22 162.4 16.0 158 160-360 46-209 (366)
162 TIGR01328 met_gam_lyase methio 99.8 1.4E-17 3.1E-22 162.8 16.9 158 160-359 53-215 (391)
163 PRK07811 cystathionine gamma-s 99.8 2E-17 4.4E-22 161.6 17.4 153 167-360 61-219 (388)
164 PRK08776 cystathionine gamma-s 99.8 2.3E-17 4.9E-22 161.9 17.4 158 161-360 55-218 (405)
165 PRK07050 cystathionine beta-ly 99.8 1.5E-17 3.2E-22 162.8 16.0 159 160-360 59-223 (394)
166 TIGR01325 O_suc_HS_sulf O-succ 99.8 3.5E-17 7.6E-22 159.6 18.4 157 160-358 48-209 (380)
167 PRK01278 argD acetylornithine 99.8 1.8E-17 3.8E-22 162.1 16.3 193 140-360 48-254 (389)
168 cd00610 OAT_like Acetyl ornith 99.8 3.6E-17 7.9E-22 160.8 18.5 210 128-360 36-270 (413)
169 cd01494 AAT_I Aspartate aminot 99.7 3.2E-17 7E-22 140.1 15.1 164 169-360 2-166 (170)
170 PLN02409 serine--glyoxylate am 99.7 6.3E-17 1.4E-21 158.9 19.0 199 131-360 11-211 (401)
171 PRK07810 O-succinylhomoserine 99.7 3.3E-17 7.1E-22 160.8 16.9 157 160-358 64-225 (403)
172 PRK14012 cysteine desulfurase; 99.7 3.7E-17 7.9E-22 160.7 17.0 158 139-314 14-185 (404)
173 TIGR03403 nifS_epsilon cystein 99.7 1E-16 2.3E-21 156.2 19.4 162 139-314 10-181 (382)
174 PRK06767 methionine gamma-lyas 99.7 6.2E-17 1.3E-21 158.1 17.8 159 160-360 55-219 (386)
175 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 1.2E-16 2.7E-21 155.5 18.4 150 141-316 10-159 (375)
176 PRK09028 cystathionine beta-ly 99.7 5.1E-17 1.1E-21 158.3 15.6 153 161-354 53-211 (394)
177 PRK13392 5-aminolevulinate syn 99.7 2.7E-16 5.9E-21 154.8 20.9 199 129-354 47-252 (410)
178 PLN02483 serine palmitoyltrans 99.7 2.4E-16 5.2E-21 158.2 19.9 186 144-354 120-315 (489)
179 PRK05939 hypothetical protein; 99.7 7.4E-17 1.6E-21 157.9 15.7 148 171-360 51-203 (397)
180 PRK07582 cystathionine gamma-l 99.7 9E-17 1.9E-21 155.9 15.7 155 160-360 45-205 (366)
181 PRK08248 O-acetylhomoserine am 99.7 1.6E-16 3.4E-21 157.0 17.5 151 169-360 66-221 (431)
182 PRK06702 O-acetylhomoserine am 99.7 2.9E-16 6.3E-21 154.4 19.0 150 169-358 63-222 (432)
183 PRK08574 cystathionine gamma-s 99.7 1.7E-16 3.8E-21 154.8 17.2 146 168-354 54-202 (385)
184 PRK11658 UDP-4-amino-4-deoxy-L 99.7 2.6E-16 5.6E-21 153.4 18.3 152 140-319 12-165 (379)
185 cd00614 CGS_like CGS_like: Cys 99.7 1.8E-16 3.9E-21 154.0 16.4 152 168-360 41-198 (369)
186 PRK06084 O-acetylhomoserine am 99.7 3.2E-16 6.9E-21 154.7 17.8 150 169-359 60-214 (425)
187 PRK00451 glycine dehydrogenase 99.7 6.3E-16 1.4E-20 153.9 19.8 124 170-308 108-238 (447)
188 TIGR03235 DNA_S_dndA cysteine 99.7 7.2E-16 1.6E-20 148.7 19.1 158 139-314 9-179 (353)
189 TIGR03301 PhnW-AepZ 2-aminoeth 99.7 7.8E-16 1.7E-20 148.0 19.1 190 136-360 6-197 (355)
190 PRK13479 2-aminoethylphosphona 99.7 8.9E-16 1.9E-20 148.9 19.4 193 133-360 9-203 (368)
191 PRK05967 cystathionine beta-ly 99.7 3.5E-16 7.6E-21 152.3 16.2 156 167-359 60-221 (395)
192 TIGR03402 FeS_nifS cysteine de 99.7 1.1E-15 2.5E-20 148.7 19.0 159 139-314 10-177 (379)
193 TIGR01329 cysta_beta_ly_E cyst 99.7 6.3E-16 1.4E-20 150.6 17.1 160 161-360 39-204 (378)
194 PRK13520 L-tyrosine decarboxyl 99.7 9.9E-16 2.1E-20 148.4 18.2 160 140-316 32-194 (371)
195 PRK07671 cystathionine beta-ly 99.7 6.3E-16 1.4E-20 150.5 16.8 152 160-354 44-199 (377)
196 TIGR01324 cysta_beta_ly_B cyst 99.7 6.3E-16 1.4E-20 150.3 16.5 152 161-354 42-200 (377)
197 TIGR02006 IscS cysteine desulf 99.7 5.8E-16 1.3E-20 152.1 16.0 158 139-314 14-183 (402)
198 PRK08064 cystathionine beta-ly 99.7 7.5E-16 1.6E-20 150.7 16.4 144 169-354 56-203 (390)
199 PLN02509 cystathionine beta-ly 99.7 1.3E-15 2.9E-20 151.1 17.4 155 160-354 124-282 (464)
200 PRK00011 glyA serine hydroxyme 99.7 1.1E-15 2.3E-20 150.9 16.6 193 139-360 36-237 (416)
201 PRK07269 cystathionine gamma-s 99.7 1.6E-15 3.5E-20 146.8 16.7 154 160-354 48-201 (364)
202 TIGR00713 hemL glutamate-1-sem 99.7 1.8E-15 3.8E-20 149.7 16.6 206 127-360 47-273 (423)
203 TIGR01821 5aminolev_synth 5-am 99.7 5.8E-15 1.3E-19 145.0 20.1 198 128-353 45-250 (402)
204 TIGR02326 transamin_PhnW 2-ami 99.7 2.8E-15 6E-20 145.2 17.3 161 169-360 37-201 (363)
205 PLN03227 serine palmitoyltrans 99.7 8.8E-15 1.9E-19 143.3 20.5 191 139-353 12-213 (392)
206 PRK09064 5-aminolevulinate syn 99.7 1.5E-14 3.3E-19 142.3 22.2 199 128-353 46-251 (407)
207 PRK06176 cystathionine gamma-s 99.7 2.8E-15 6E-20 146.1 16.7 152 160-354 44-199 (380)
208 TIGR03588 PseC UDP-4-keto-6-de 99.7 8E-15 1.7E-19 143.0 19.9 152 140-315 8-160 (380)
209 PRK05994 O-acetylhomoserine am 99.6 4.5E-15 9.8E-20 146.7 17.7 145 169-354 65-213 (427)
210 PF12897 Aminotran_MocR: Alani 99.6 5E-15 1.1E-19 139.1 16.8 185 159-359 60-263 (425)
211 TIGR03812 tyr_de_CO2_Arch tyro 99.6 6E-15 1.3E-19 143.1 17.5 157 143-316 35-196 (373)
212 PRK04366 glycine dehydrogenase 99.6 2.1E-14 4.6E-19 144.1 21.5 159 139-313 81-248 (481)
213 PRK08134 O-acetylhomoserine am 99.6 7.2E-15 1.6E-19 145.3 17.4 145 169-354 66-214 (433)
214 COG0520 csdA Selenocysteine ly 99.6 8.7E-15 1.9E-19 143.1 17.6 158 140-314 34-203 (405)
215 PLN02651 cysteine desulfurase 99.6 1.4E-14 3.1E-19 140.4 17.9 161 137-314 8-179 (364)
216 PRK13393 5-aminolevulinate syn 99.6 5.4E-14 1.2E-18 138.3 21.8 198 128-353 45-250 (406)
217 PRK04073 rocD ornithine--oxo-a 99.6 1.3E-14 2.8E-19 142.3 17.3 206 126-360 38-266 (396)
218 PRK05968 hypothetical protein; 99.6 1.1E-14 2.4E-19 142.4 16.5 150 169-360 65-220 (389)
219 PRK15407 lipopolysaccharide bi 99.6 2.8E-14 6E-19 141.4 19.5 149 140-315 42-198 (438)
220 cd00616 AHBA_syn 3-amino-5-hyd 99.6 2E-14 4.2E-19 138.3 17.9 127 167-314 18-144 (352)
221 PRK02936 argD acetylornithine 99.6 1.8E-14 3.9E-19 140.3 17.8 194 139-360 45-246 (377)
222 PRK00854 rocD ornithine--oxo-a 99.6 1.2E-14 2.6E-19 142.7 16.7 199 127-360 40-267 (401)
223 PRK05093 argD bifunctional N-s 99.6 1.9E-14 4.1E-19 141.5 17.6 198 127-360 39-263 (403)
224 KOG1549 Cysteine desulfurase N 99.6 2.2E-14 4.7E-19 137.2 15.4 159 139-314 54-222 (428)
225 PRK12381 bifunctional succinyl 99.6 3.9E-14 8.5E-19 139.4 16.8 191 141-360 57-262 (406)
226 PRK05937 8-amino-7-oxononanoat 99.6 2.2E-13 4.7E-18 132.5 21.1 193 139-358 18-221 (370)
227 PRK07505 hypothetical protein; 99.6 1.9E-13 4.1E-18 134.4 20.3 198 127-354 45-255 (402)
228 PRK07812 O-acetylhomoserine am 99.6 9.3E-14 2E-18 137.3 16.9 146 169-354 71-220 (436)
229 PF01041 DegT_DnrJ_EryC1: DegT 99.5 2.3E-13 5E-18 132.0 17.7 149 142-316 5-153 (363)
230 COG1104 NifS Cysteine sulfinat 99.5 1E-13 2.2E-18 132.0 14.7 160 138-314 11-182 (386)
231 COG0399 WecE Predicted pyridox 99.5 2E-13 4.4E-18 130.8 16.4 146 141-314 14-160 (374)
232 PTZ00125 ornithine aminotransf 99.5 2.3E-13 5.1E-18 133.4 17.0 206 128-360 31-258 (400)
233 PRK08088 4-aminobutyrate amino 99.5 4.9E-13 1.1E-17 132.4 18.7 214 127-360 40-278 (425)
234 PF00266 Aminotran_5: Aminotra 99.5 5.2E-13 1.1E-17 129.7 18.2 185 137-355 8-205 (371)
235 PRK04260 acetylornithine amino 99.5 8.5E-13 1.8E-17 128.5 17.5 199 128-360 29-244 (375)
236 TIGR01814 kynureninase kynuren 99.5 9.8E-13 2.1E-17 129.5 17.9 174 128-314 26-212 (406)
237 PRK08114 cystathionine beta-ly 99.5 9.2E-13 2E-17 128.4 16.9 145 169-354 64-214 (395)
238 PRK05613 O-acetylhomoserine am 99.5 9.4E-13 2E-17 130.3 17.2 146 169-354 71-220 (437)
239 PF01053 Cys_Met_Meta_PP: Cys/ 99.5 9.6E-13 2.1E-17 127.9 16.4 145 169-354 57-206 (386)
240 TIGR03531 selenium_SpcS O-phos 99.5 1.2E-11 2.5E-16 122.0 23.8 140 169-314 103-246 (444)
241 TIGR03246 arg_catab_astC succi 99.5 2.5E-12 5.5E-17 126.2 17.9 193 140-360 52-258 (397)
242 COG0156 BioF 7-keto-8-aminopel 99.5 1.2E-11 2.6E-16 119.4 21.5 201 127-353 38-245 (388)
243 PLN02955 8-amino-7-oxononanoat 99.4 1.7E-11 3.7E-16 121.1 22.1 199 128-356 102-327 (476)
244 PLN02624 ornithine-delta-amino 99.4 9.6E-12 2.1E-16 124.7 18.2 208 127-360 74-304 (474)
245 PRK04612 argD acetylornithine 99.4 1.9E-11 4.1E-16 120.3 19.1 194 139-360 56-266 (408)
246 PLN03032 serine decarboxylase; 99.4 3.9E-11 8.4E-16 116.3 20.7 163 143-315 38-208 (374)
247 PRK09792 4-aminobutyrate trans 99.4 1.8E-11 3.9E-16 121.0 18.6 202 139-360 56-277 (421)
248 COG0626 MetC Cystathionine bet 99.4 1.3E-11 2.7E-16 119.2 16.9 147 169-355 65-215 (396)
249 PRK04311 selenocysteine syntha 99.4 3.9E-11 8.4E-16 119.4 20.7 190 132-355 90-298 (464)
250 KOG0053 Cystathionine beta-lya 99.4 1.1E-11 2.5E-16 118.4 16.1 145 169-354 79-227 (409)
251 PLN00144 acetylornithine trans 99.4 8.1E-12 1.8E-16 122.0 15.0 193 140-360 32-246 (382)
252 PRK02769 histidine decarboxyla 99.4 4.5E-11 9.8E-16 116.4 20.1 139 169-317 63-207 (380)
253 TIGR02618 tyr_phenol_ly tyrosi 99.4 3.7E-11 8E-16 117.4 18.8 175 162-353 66-256 (450)
254 PRK00062 glutamate-1-semialdeh 99.4 1.2E-11 2.5E-16 122.6 15.6 201 127-360 49-275 (426)
255 PRK08360 4-aminobutyrate amino 99.4 3.3E-11 7.2E-16 119.8 18.7 213 127-360 40-283 (443)
256 TIGR01885 Orn_aminotrans ornit 99.4 2.9E-11 6.3E-16 118.8 17.7 203 126-360 35-266 (401)
257 TIGR00474 selA seryl-tRNA(sec) 99.3 1.1E-10 2.3E-15 115.9 20.6 189 132-354 85-292 (454)
258 TIGR01788 Glu-decarb-GAD gluta 99.3 7.4E-11 1.6E-15 116.5 18.8 163 139-315 52-234 (431)
259 PRK06434 cystathionine gamma-l 99.3 2.7E-11 5.9E-16 117.9 15.4 142 169-354 66-211 (384)
260 COG1103 Archaea-specific pyrid 99.3 1.7E-10 3.6E-15 103.7 18.1 161 169-356 63-224 (382)
261 PLN02994 1-aminocyclopropane-1 99.3 5E-12 1.1E-16 107.2 7.6 65 162-227 87-153 (153)
262 PRK06918 4-aminobutyrate amino 99.3 1.1E-10 2.3E-15 116.5 17.8 215 126-360 52-298 (451)
263 PF01276 OKR_DC_1: Orn/Lys/Arg 99.3 2.4E-11 5.2E-16 118.2 12.3 174 160-353 58-243 (417)
264 TIGR00700 GABAtrnsam 4-aminobu 99.3 1.4E-10 3E-15 114.8 18.0 201 140-360 50-276 (420)
265 PF01212 Beta_elim_lyase: Beta 99.3 3.8E-11 8.2E-16 112.6 13.0 156 141-312 8-167 (290)
266 PRK07495 4-aminobutyrate amino 99.3 2.3E-10 5E-15 113.2 18.4 201 139-360 56-277 (425)
267 COG2873 MET17 O-acetylhomoseri 99.3 4.2E-11 9E-16 112.0 12.0 149 169-358 64-217 (426)
268 PRK13237 tyrosine phenol-lyase 99.3 3.5E-10 7.6E-15 110.9 18.2 176 161-353 72-263 (460)
269 PRK06777 4-aminobutyrate amino 99.2 2.4E-10 5.1E-15 113.1 17.0 214 127-360 39-277 (421)
270 PLN02590 probable tyrosine dec 99.2 6.8E-10 1.5E-14 112.1 19.9 155 160-317 159-331 (539)
271 PLN02880 tyrosine decarboxylas 99.2 6.7E-10 1.5E-14 111.6 19.0 153 162-317 113-283 (490)
272 PF06838 Met_gamma_lyase: Meth 99.2 1.5E-09 3.3E-14 101.8 19.9 183 143-356 28-228 (403)
273 PLN02414 glycine dehydrogenase 99.2 2.6E-10 5.6E-15 121.7 16.3 143 160-314 554-707 (993)
274 PRK13034 serine hydroxymethylt 99.2 4.4E-10 9.4E-15 111.0 16.9 183 140-354 40-235 (416)
275 TIGR00709 dat 2,4-diaminobutyr 99.2 3.8E-09 8.1E-14 105.2 22.0 216 128-360 39-285 (442)
276 TIGR02407 ectoine_ectB diamino 99.2 1.8E-09 3.9E-14 106.6 19.3 217 127-360 34-274 (412)
277 COG0075 Serine-pyruvate aminot 99.2 1.5E-09 3.2E-14 104.4 17.9 161 133-313 9-171 (383)
278 PRK09264 diaminobutyrate--2-ox 99.2 3E-09 6.6E-14 105.4 20.7 216 127-360 38-278 (425)
279 PRK05964 adenosylmethionine--8 99.2 1.2E-09 2.7E-14 108.1 17.6 198 140-360 59-280 (423)
280 PRK08117 4-aminobutyrate amino 99.2 1.7E-09 3.6E-14 107.4 18.6 213 127-360 42-286 (433)
281 COG4992 ArgD Ornithine/acetylo 99.2 6.5E-10 1.4E-14 106.2 14.8 206 127-359 41-262 (404)
282 PRK15029 arginine decarboxylas 99.2 9.9E-10 2.1E-14 114.3 17.1 150 191-353 222-389 (755)
283 PRK06058 4-aminobutyrate amino 99.2 2.1E-09 4.6E-14 107.0 19.0 216 126-360 54-298 (443)
284 COG2008 GLY1 Threonine aldolas 99.2 4.4E-10 9.4E-15 105.3 12.6 162 137-312 9-172 (342)
285 PTZ00094 serine hydroxymethylt 99.1 1.7E-09 3.6E-14 108.0 17.5 185 139-354 45-249 (452)
286 PRK03715 argD acetylornithine 99.1 3E-09 6.6E-14 104.3 18.7 189 141-359 54-257 (395)
287 COG0076 GadB Glutamate decarbo 99.1 2.8E-09 6.1E-14 105.8 17.1 165 140-317 74-251 (460)
288 PRK04013 argD acetylornithine/ 99.1 2E-09 4.3E-14 104.3 15.5 189 140-359 41-239 (364)
289 TIGR03799 NOD_PanD_pyr putativ 99.1 7.3E-09 1.6E-13 104.6 20.1 150 161-315 119-307 (522)
290 PF00282 Pyridoxal_deC: Pyrido 99.1 7.1E-09 1.5E-13 100.8 18.1 167 141-316 52-237 (373)
291 PLN02263 serine decarboxylase 99.1 2E-08 4.3E-13 99.4 20.4 142 168-317 130-277 (470)
292 PRK06541 hypothetical protein; 99.1 9.8E-09 2.1E-13 102.6 18.3 212 127-360 51-301 (460)
293 PRK13578 ornithine decarboxyla 99.0 7.6E-09 1.6E-13 106.8 17.6 153 191-354 191-359 (720)
294 cd00611 PSAT_like Phosphoserin 99.0 1E-09 2.2E-14 106.2 10.2 162 132-314 2-174 (355)
295 PRK08593 4-aminobutyrate amino 99.0 3.3E-08 7.2E-13 98.4 19.1 215 127-360 41-286 (445)
296 TIGR03372 putres_am_tran putre 99.0 5.8E-08 1.3E-12 96.4 19.3 213 126-359 73-303 (442)
297 PRK15400 lysine decarboxylase 98.9 2.1E-08 4.6E-13 103.4 16.0 150 191-354 212-371 (714)
298 COG0160 GabT 4-aminobutyrate a 98.9 6.7E-08 1.5E-12 94.8 18.2 215 126-359 54-300 (447)
299 PLN02724 Molybdenum cofactor s 98.9 6.2E-08 1.3E-12 103.3 19.4 140 169-314 80-241 (805)
300 PRK15399 lysine decarboxylase 98.9 4.8E-08 1E-12 100.9 16.5 149 191-354 212-371 (713)
301 PLN03226 serine hydroxymethylt 98.9 9.8E-08 2.1E-12 95.7 18.4 188 140-353 46-249 (475)
302 PRK11522 putrescine--2-oxoglut 98.9 1.1E-07 2.3E-12 95.1 18.3 212 127-359 81-310 (459)
303 PRK05769 4-aminobutyrate amino 98.9 1.5E-07 3.3E-12 93.6 19.3 215 127-360 53-300 (441)
304 KOG1359 Glycine C-acetyltransf 98.9 3.3E-08 7.2E-13 90.0 12.9 199 127-354 66-267 (417)
305 PRK03080 phosphoserine aminotr 98.9 2.6E-08 5.7E-13 97.2 12.7 161 127-314 10-175 (378)
306 TIGR03811 tyr_de_CO2_Ent tyros 98.8 3.1E-07 6.8E-12 94.0 20.4 166 140-315 95-325 (608)
307 PRK13580 serine hydroxymethylt 98.8 1E-07 2.2E-12 94.8 16.2 192 139-354 60-290 (493)
308 PRK05639 4-aminobutyrate amino 98.8 5.8E-07 1.3E-11 89.8 20.6 214 126-359 51-300 (457)
309 PLN02271 serine hydroxymethylt 98.8 2.5E-07 5.3E-12 92.7 17.1 191 139-354 159-365 (586)
310 PRK05965 hypothetical protein; 98.8 3.2E-07 6.9E-12 91.8 18.0 211 127-358 45-293 (459)
311 PRK06082 4-aminobutyrate amino 98.8 5.7E-07 1.2E-11 89.9 19.3 205 127-356 71-303 (459)
312 PLN02482 glutamate-1-semialdeh 98.8 3.5E-07 7.5E-12 91.7 17.6 205 126-359 97-323 (474)
313 KOG1368 Threonine aldolase [Am 98.8 8.5E-08 1.8E-12 87.5 11.9 143 162-314 51-199 (384)
314 PF04864 Alliinase_C: Allinase 98.8 8E-09 1.7E-13 96.4 5.2 155 169-360 45-205 (363)
315 PRK12389 glutamate-1-semialdeh 98.7 6.3E-07 1.4E-11 88.9 18.6 205 127-359 52-277 (428)
316 COG0001 HemL Glutamate-1-semia 98.7 5.4E-07 1.2E-11 87.3 17.3 198 126-359 51-277 (432)
317 TIGR00461 gcvP glycine dehydro 98.7 2.8E-07 6E-12 97.8 16.4 144 160-314 516-669 (939)
318 PRK06062 hypothetical protein; 98.7 8.4E-07 1.8E-11 88.6 18.6 208 126-356 51-289 (451)
319 PRK07482 hypothetical protein; 98.7 7.2E-07 1.6E-11 89.3 18.1 209 127-356 49-295 (461)
320 COG1982 LdcC Arginine/lysine/o 98.7 3.2E-07 7E-12 91.5 15.3 160 169-354 72-236 (557)
321 KOG2862 Alanine-glyoxylate ami 98.7 6.6E-07 1.4E-11 82.3 15.8 162 132-313 20-183 (385)
322 PRK13360 omega amino acid--pyr 98.7 7.8E-07 1.7E-11 88.6 17.8 195 139-355 62-289 (442)
323 TIGR00508 bioA adenosylmethion 98.7 7E-07 1.5E-11 88.6 17.4 194 139-356 61-283 (427)
324 PRK06938 diaminobutyrate--2-ox 98.7 2.2E-06 4.8E-11 85.8 20.2 216 126-359 61-309 (464)
325 PLN02760 4-aminobutyrate:pyruv 98.7 1.8E-06 3.9E-11 87.2 19.6 208 127-356 88-335 (504)
326 PRK06173 adenosylmethionine--8 98.7 7.6E-07 1.6E-11 88.3 16.6 193 140-356 61-282 (429)
327 PRK06916 adenosylmethionine--8 98.7 1.5E-06 3.2E-11 87.0 18.8 208 127-356 55-299 (460)
328 TIGR01364 serC_1 phosphoserine 98.7 3.8E-07 8.1E-12 88.1 13.9 179 140-354 3-189 (349)
329 PRK06943 adenosylmethionine--8 98.7 1.5E-06 3.2E-11 86.8 18.6 195 139-355 70-296 (453)
330 PRK07986 adenosylmethionine--8 98.7 9.8E-07 2.1E-11 87.5 16.7 193 140-355 60-279 (428)
331 PRK12403 putative aminotransfe 98.6 2.5E-06 5.4E-11 85.4 19.5 196 140-356 71-297 (460)
332 PRK00615 glutamate-1-semialdeh 98.6 1.1E-06 2.3E-11 87.3 16.5 207 126-359 51-278 (433)
333 PRK05630 adenosylmethionine--8 98.6 1.6E-06 3.6E-11 85.8 17.9 193 139-359 56-280 (422)
334 PF00202 Aminotran_3: Aminotra 98.6 1E-06 2.2E-11 84.8 16.0 196 141-358 34-254 (339)
335 PRK09221 beta alanine--pyruvat 98.6 1.9E-06 4.1E-11 85.9 18.4 195 140-355 66-292 (445)
336 PRK05367 glycine dehydrogenase 98.6 8.6E-07 1.9E-11 95.3 16.9 137 166-314 537-681 (954)
337 PF00464 SHMT: Serine hydroxym 98.6 3.3E-07 7.2E-12 89.1 12.3 188 140-354 32-236 (399)
338 PRK06917 hypothetical protein; 98.6 2.9E-06 6.4E-11 84.6 19.3 195 140-356 48-275 (447)
339 TIGR02617 tnaA_trp_ase tryptop 98.6 1.5E-06 3.3E-11 84.8 16.6 192 140-353 55-269 (467)
340 PRK05355 3-phosphoserine/phosp 98.6 4.8E-07 1E-11 87.7 13.1 166 131-314 5-177 (360)
341 PRK07046 aminotransferase; Val 98.6 2.3E-06 4.9E-11 85.5 17.8 201 126-359 73-294 (453)
342 PRK08742 adenosylmethionine--8 98.6 2.4E-06 5.2E-11 85.7 17.8 209 127-356 63-312 (472)
343 PRK07481 hypothetical protein; 98.6 6.3E-06 1.4E-10 82.3 20.5 198 140-355 59-287 (449)
344 COG4100 Cystathionine beta-lya 98.6 1.1E-06 2.4E-11 80.4 13.5 169 159-356 56-239 (416)
345 PRK07030 adenosylmethionine--8 98.6 5E-06 1.1E-10 83.3 19.5 198 139-359 63-294 (466)
346 PRK07480 putative aminotransfe 98.6 2.7E-06 5.9E-11 85.0 17.6 197 140-356 67-294 (456)
347 PRK06931 diaminobutyrate--2-ox 98.6 8.4E-06 1.8E-10 81.6 20.8 215 127-359 57-303 (459)
348 PRK06105 aminotransferase; Pro 98.6 3.1E-06 6.7E-11 84.8 17.7 208 127-355 47-292 (460)
349 COG0161 BioA Adenosylmethionin 98.6 3.2E-06 7E-11 82.8 17.1 194 141-355 62-289 (449)
350 PRK07036 hypothetical protein; 98.5 6.2E-06 1.3E-10 82.7 18.6 211 127-356 50-296 (466)
351 PRK07678 aminotransferase; Val 98.5 6.2E-06 1.3E-10 82.4 18.0 205 127-355 46-287 (451)
352 PRK06149 hypothetical protein; 98.5 5.8E-06 1.3E-10 90.0 18.8 212 127-359 584-823 (972)
353 KOG1360 5-aminolevulinate synt 98.5 2.5E-06 5.5E-11 80.8 13.7 188 139-354 185-377 (570)
354 PRK12566 glycine dehydrogenase 98.5 4.3E-06 9.2E-11 88.6 16.7 168 160-353 529-707 (954)
355 PRK06148 hypothetical protein; 98.5 4.3E-06 9.3E-11 91.2 17.2 213 126-359 622-863 (1013)
356 PRK07483 hypothetical protein; 98.5 6.4E-06 1.4E-10 82.1 17.0 196 139-356 46-275 (443)
357 COG0112 GlyA Glycine/serine hy 98.4 3.4E-06 7.4E-11 80.2 13.2 187 140-354 38-233 (413)
358 PRK06209 glutamate-1-semialdeh 98.4 4.4E-06 9.5E-11 83.0 13.7 184 139-359 64-260 (431)
359 COG1003 GcvP Glycine cleavage 98.4 4.4E-06 9.6E-11 80.1 12.1 142 160-317 95-248 (496)
360 TIGR00699 GABAtrns_euk 4-amino 98.4 5.2E-05 1.1E-09 75.8 20.0 186 126-319 56-301 (464)
361 TIGR01366 serC_3 phosphoserine 98.3 6.1E-06 1.3E-10 80.1 12.3 153 133-314 7-166 (361)
362 COG1921 SelA Selenocysteine sy 98.2 0.00013 2.8E-09 70.2 18.2 188 139-359 38-235 (395)
363 PLN02974 adenosylmethionine-8- 98.2 0.00011 2.3E-09 78.1 18.7 209 129-356 366-660 (817)
364 PRK08297 L-lysine aminotransfe 98.2 8.7E-05 1.9E-09 74.0 17.2 183 127-319 44-275 (443)
365 KOG0629 Glutamate decarboxylas 98.1 0.00012 2.7E-09 70.2 16.3 150 160-314 130-294 (510)
366 KOG1401 Acetylornithine aminot 98.1 0.0001 2.3E-09 70.4 15.6 209 128-359 56-284 (433)
367 PLN02414 glycine dehydrogenase 98.1 3.1E-05 6.6E-10 83.4 13.1 141 139-308 116-268 (993)
368 TIGR03251 LAT_fam L-lysine 6-t 98.0 0.00039 8.5E-09 69.1 18.7 186 127-319 37-268 (431)
369 COG3844 Kynureninase [Amino ac 98.0 6.1E-05 1.3E-09 70.0 11.0 130 170-317 75-210 (407)
370 PRK12462 phosphoserine aminotr 98.0 0.0001 2.3E-09 71.2 12.7 167 130-314 5-179 (364)
371 PRK05367 glycine dehydrogenase 97.9 0.00017 3.6E-09 77.9 14.5 129 160-312 105-244 (954)
372 KOG1404 Alanine-glyoxylate ami 97.9 0.00018 3.9E-09 68.4 12.1 212 127-359 49-290 (442)
373 PF03841 SelA: L-seryl-tRNA se 97.8 6.7E-06 1.5E-10 78.3 1.3 193 136-354 14-217 (367)
374 TIGR01365 serC_2 phosphoserine 97.8 0.00019 4.1E-09 69.9 11.2 127 169-314 37-166 (374)
375 KOG1402 Ornithine aminotransfe 97.8 0.00016 3.4E-09 67.4 10.0 161 137-320 73-258 (427)
376 KOG1383 Glutamate decarboxylas 97.8 0.00012 2.7E-09 70.9 9.3 140 167-317 116-263 (491)
377 COG3033 TnaA Tryptophanase [Am 97.7 0.00068 1.5E-08 64.0 13.4 165 160-334 72-256 (471)
378 KOG1357 Serine palmitoyltransf 97.7 0.00038 8.2E-09 67.4 11.3 166 168-354 179-351 (519)
379 PLN02452 phosphoserine transam 97.7 0.0008 1.7E-08 65.4 13.1 167 130-314 8-181 (365)
380 KOG1358 Serine palmitoyltransf 97.6 0.0019 4.2E-08 61.6 14.3 174 127-319 93-279 (467)
381 KOG0628 Aromatic-L-amino-acid/ 97.6 0.00029 6.2E-09 68.4 8.9 145 167-317 109-279 (511)
382 PF05889 SLA_LP_auto_ag: Solub 97.4 0.0018 3.8E-08 62.4 11.4 134 175-314 60-196 (389)
383 TIGR00461 gcvP glycine dehydro 97.1 0.011 2.5E-07 63.4 14.4 142 139-309 77-229 (939)
384 PF02347 GDC-P: Glycine cleava 96.7 0.019 4.2E-07 56.5 11.7 121 166-308 105-231 (429)
385 COG0403 GcvP Glycine cleavage 96.4 0.15 3.3E-06 49.5 15.3 104 189-308 136-245 (450)
386 PLN02672 methionine S-methyltr 96.2 0.056 1.2E-06 59.1 12.6 148 146-313 408-567 (1082)
387 KOG2040 Glycine dehydrogenase 95.9 0.14 3E-06 52.2 12.9 141 160-313 568-720 (1001)
388 KOG2467 Glycine/serine hydroxy 95.3 0.23 4.9E-06 47.5 11.1 184 141-354 53-256 (477)
389 KOG1403 Predicted alanine-glyo 94.8 0.059 1.3E-06 50.0 5.7 188 127-326 46-265 (452)
390 KOG3843 Predicted serine hydro 94.0 0.64 1.4E-05 42.6 10.3 134 176-314 62-198 (432)
391 PRK12566 glycine dehydrogenase 93.7 2.2 4.7E-05 46.3 15.3 122 160-307 108-241 (954)
392 COG2102 Predicted ATPases of P 93.4 1.3 2.7E-05 39.7 11.0 99 193-307 4-116 (223)
393 KOG1405 4-aminobutyrate aminot 91.9 0.66 1.4E-05 44.2 7.6 66 253-319 254-321 (484)
394 COG1932 SerC Phosphoserine ami 89.6 3.8 8.3E-05 39.3 10.5 99 128-227 4-105 (365)
395 KOG3846 L-kynurenine hydrolase 88.6 3.5 7.5E-05 38.8 9.2 169 129-313 67-254 (465)
396 PRK08265 short chain dehydroge 88.2 11 0.00024 34.2 12.6 101 191-297 7-108 (261)
397 KOG1465 Translation initiation 88.0 16 0.00034 34.4 12.9 103 189-308 161-269 (353)
398 TIGR00290 MJ0570_dom MJ0570-re 85.7 13 0.00029 33.5 11.1 100 193-308 4-116 (223)
399 KOG1201 Hydroxysteroid 17-beta 84.5 24 0.00052 33.1 12.4 102 188-297 36-143 (300)
400 PF00106 adh_short: short chai 84.5 13 0.00029 30.7 10.3 99 193-297 3-109 (167)
401 TIGR03679 arCOG00187 arCOG0018 84.0 26 0.00056 31.4 12.3 102 193-307 1-116 (218)
402 cd02742 GH20_hexosaminidase Be 81.3 3.5 7.6E-05 39.0 5.9 70 228-308 21-90 (303)
403 TIGR00289 conserved hypothetic 81.1 23 0.0005 31.9 10.8 100 193-308 4-116 (222)
404 KOG2790 Phosphoserine aminotra 80.7 15 0.00033 34.3 9.4 171 128-312 6-184 (370)
405 PF05368 NmrA: NmrA-like famil 80.3 24 0.00052 31.3 10.9 90 199-307 8-98 (233)
406 cd06568 GH20_SpHex_like A subg 79.2 3.4 7.3E-05 39.6 5.1 72 227-308 22-93 (329)
407 PRK05872 short chain dehydroge 78.4 48 0.001 30.7 12.7 101 190-296 9-113 (296)
408 PRK06500 short chain dehydroge 78.3 48 0.001 29.4 12.2 80 192-277 8-87 (249)
409 PRK07063 short chain dehydroge 78.3 51 0.0011 29.6 12.7 101 190-296 7-114 (260)
410 PRK12936 3-ketoacyl-(acyl-carr 78.0 48 0.0011 29.2 12.7 80 192-277 8-87 (245)
411 TIGR03573 WbuX N-acetyl sugar 77.5 64 0.0014 31.0 13.4 107 190-317 60-174 (343)
412 PRK12481 2-deoxy-D-gluconate 3 77.5 48 0.001 29.8 12.1 80 191-276 9-89 (251)
413 PRK08862 short chain dehydroge 77.5 39 0.00085 30.1 11.3 82 191-279 6-91 (227)
414 COG4221 Short-chain alcohol de 77.4 27 0.00059 31.8 10.0 101 191-298 6-111 (246)
415 PRK06194 hypothetical protein; 77.0 59 0.0013 29.7 12.8 81 191-277 7-90 (287)
416 cd06562 GH20_HexA_HexB-like Be 77.0 4.2 9E-05 39.3 5.0 67 227-308 22-88 (348)
417 cd01994 Alpha_ANH_like_IV This 76.6 52 0.0011 28.9 12.2 103 193-308 3-119 (194)
418 PRK05876 short chain dehydroge 76.5 59 0.0013 29.8 12.5 82 191-279 7-91 (275)
419 cd06570 GH20_chitobiase-like_1 75.1 4.5 9.8E-05 38.4 4.6 64 228-308 23-86 (311)
420 PRK07024 short chain dehydroge 74.9 64 0.0014 29.0 12.3 80 192-277 4-85 (257)
421 PRK08277 D-mannonate oxidoredu 74.5 68 0.0015 29.2 12.5 82 190-277 10-94 (278)
422 PRK06139 short chain dehydroge 74.5 62 0.0013 30.8 12.4 100 191-298 8-114 (330)
423 PRK06935 2-deoxy-D-gluconate 3 74.5 65 0.0014 28.9 12.1 82 190-277 15-98 (258)
424 PRK07067 sorbitol dehydrogenas 74.4 65 0.0014 28.9 12.4 80 192-277 8-87 (257)
425 PRK06114 short chain dehydroge 73.7 68 0.0015 28.8 12.1 81 191-277 9-93 (254)
426 PRK08589 short chain dehydroge 73.2 73 0.0016 29.0 12.7 96 192-295 8-110 (272)
427 PRK06483 dihydromonapterin red 73.2 66 0.0014 28.4 12.0 98 192-297 4-103 (236)
428 TIGR01470 cysG_Nterm siroheme 73.1 59 0.0013 28.8 11.1 102 188-317 7-110 (205)
429 PRK05717 oxidoreductase; Valid 73.0 62 0.0013 29.0 11.6 80 192-277 12-91 (255)
430 PF01902 ATP_bind_4: ATP-bindi 72.9 16 0.00035 32.8 7.4 100 193-308 4-116 (218)
431 TIGR03581 EF_0839 conserved hy 72.8 71 0.0015 28.6 12.8 160 140-318 39-217 (236)
432 PRK05867 short chain dehydroge 72.6 71 0.0015 28.6 12.6 81 191-277 10-93 (253)
433 PRK07231 fabG 3-ketoacyl-(acyl 72.0 71 0.0015 28.3 12.2 82 191-278 6-89 (251)
434 PRK06841 short chain dehydroge 71.6 74 0.0016 28.3 12.5 82 190-277 15-96 (255)
435 PF05378 Hydant_A_N: Hydantoin 71.5 66 0.0014 27.7 11.0 46 251-303 130-176 (176)
436 PRK07478 short chain dehydroge 71.3 76 0.0017 28.3 12.2 79 192-277 8-90 (254)
437 PRK05678 succinyl-CoA syntheta 71.0 14 0.0003 34.8 6.8 75 222-314 51-127 (291)
438 PRK06079 enoyl-(acyl carrier p 71.0 60 0.0013 29.2 11.0 81 191-279 8-91 (252)
439 PRK12859 3-ketoacyl-(acyl-carr 70.9 52 0.0011 29.6 10.6 82 190-277 6-103 (256)
440 PF10087 DUF2325: Uncharacteri 70.5 46 0.00099 25.4 9.2 71 223-308 10-80 (97)
441 TIGR02415 23BDH acetoin reduct 70.3 79 0.0017 28.1 12.1 96 193-294 3-103 (254)
442 cd06569 GH20_Sm-chitobiase-lik 70.0 9.6 0.00021 38.1 5.8 82 227-308 26-115 (445)
443 PRK11070 ssDNA exonuclease Rec 69.1 67 0.0015 33.3 11.8 100 196-312 52-160 (575)
444 PRK07097 gluconate 5-dehydroge 68.9 89 0.0019 28.2 12.8 101 191-297 11-116 (265)
445 PRK08263 short chain dehydroge 68.9 92 0.002 28.3 11.9 79 192-277 5-84 (275)
446 TIGR01832 kduD 2-deoxy-D-gluco 68.8 84 0.0018 27.8 12.8 83 189-277 4-87 (248)
447 PRK07791 short chain dehydroge 68.8 97 0.0021 28.5 12.7 99 192-297 8-121 (286)
448 PRK12743 oxidoreductase; Provi 68.6 81 0.0018 28.3 11.3 80 192-277 4-87 (256)
449 PRK08063 enoyl-(acyl carrier p 68.6 83 0.0018 27.9 11.3 81 192-278 6-90 (250)
450 PRK06128 oxidoreductase; Provi 68.5 76 0.0017 29.4 11.4 101 191-297 56-164 (300)
451 PRK06484 short chain dehydroge 68.3 70 0.0015 32.2 11.9 80 192-277 7-86 (520)
452 PRK05854 short chain dehydroge 67.9 75 0.0016 29.8 11.3 79 192-277 16-100 (313)
453 PRK08309 short chain dehydroge 67.9 79 0.0017 27.2 11.8 96 193-305 3-101 (177)
454 PRK07109 short chain dehydroge 67.8 1.1E+02 0.0024 29.1 12.5 78 191-275 9-90 (334)
455 PRK12938 acetyacetyl-CoA reduc 67.8 79 0.0017 28.0 11.0 80 192-277 4-88 (246)
456 TIGR01019 sucCoAalpha succinyl 67.7 18 0.00038 34.0 6.7 75 222-314 49-125 (286)
457 PRK08176 pdxK pyridoxal-pyrido 67.6 67 0.0014 29.8 10.7 56 252-314 68-130 (281)
458 PRK07523 gluconate 5-dehydroge 67.2 93 0.002 27.8 12.9 81 191-277 11-94 (255)
459 PRK06484 short chain dehydroge 67.0 78 0.0017 31.9 11.9 99 192-297 270-373 (520)
460 PF08543 Phos_pyr_kin: Phospho 66.9 20 0.00043 32.6 6.9 56 251-314 42-97 (246)
461 PRK08085 gluconate 5-dehydroge 66.9 95 0.0021 27.7 12.9 81 191-277 10-93 (254)
462 COG2240 PdxK Pyridoxal/pyridox 66.8 84 0.0018 29.4 10.8 56 252-314 53-115 (281)
463 COG2870 RfaE ADP-heptose synth 66.7 21 0.00047 34.9 7.1 110 196-314 72-182 (467)
464 PRK08278 short chain dehydroge 65.7 1.1E+02 0.0023 27.9 12.6 81 191-277 7-97 (273)
465 COG0300 DltE Short-chain dehyd 65.4 81 0.0018 29.2 10.5 99 192-297 7-113 (265)
466 PRK07985 oxidoreductase; Provi 65.2 1.1E+02 0.0025 28.2 11.8 100 191-296 50-157 (294)
467 PRK08936 glucose-1-dehydrogena 65.1 1E+02 0.0023 27.6 11.7 82 190-277 7-92 (261)
468 PF02662 FlpD: Methyl-viologen 65.1 25 0.00053 28.6 6.3 58 237-304 29-91 (124)
469 PRK06482 short chain dehydroge 65.0 1.1E+02 0.0024 27.7 11.7 79 193-277 5-83 (276)
470 PRK08643 acetoin reductase; Va 64.8 1E+02 0.0023 27.4 12.3 79 193-278 5-87 (256)
471 PRK07062 short chain dehydroge 64.5 1.1E+02 0.0023 27.5 12.5 81 191-277 9-94 (265)
472 PRK12429 3-hydroxybutyrate deh 64.2 1E+02 0.0023 27.3 12.2 82 191-278 5-89 (258)
473 cd06564 GH20_DspB_LnbB-like Gl 64.2 15 0.00032 35.0 5.7 79 228-308 22-100 (326)
474 PRK07825 short chain dehydroge 64.2 1.1E+02 0.0024 27.6 12.2 78 192-277 7-85 (273)
475 PRK08339 short chain dehydroge 63.6 1.2E+02 0.0025 27.6 12.3 95 192-294 10-111 (263)
476 PF00728 Glyco_hydro_20: Glyco 63.4 5.7 0.00012 38.0 2.7 69 228-308 23-91 (351)
477 cd06563 GH20_chitobiase-like T 63.2 15 0.00033 35.5 5.6 77 228-308 23-104 (357)
478 PRK07666 fabG 3-ketoacyl-(acyl 63.1 1.1E+02 0.0023 27.0 12.8 83 192-281 9-95 (239)
479 PRK10538 malonic semialdehyde 63.1 1.1E+02 0.0024 27.2 11.9 78 193-277 3-81 (248)
480 smart00642 Aamy Alpha-amylase 62.6 45 0.00098 28.4 7.8 27 288-314 68-94 (166)
481 PF14258 DUF4350: Domain of un 62.5 46 0.001 23.6 6.8 61 227-309 9-70 (70)
482 PRK07453 protochlorophyllide o 62.4 1.4E+02 0.003 28.0 12.4 79 192-277 8-90 (322)
483 PRK07792 fabG 3-ketoacyl-(acyl 62.4 1.3E+02 0.0029 27.9 13.2 97 191-296 13-117 (306)
484 TIGR03325 BphB_TodD cis-2,3-di 62.4 71 0.0015 28.8 9.7 79 191-276 6-85 (262)
485 PRK12935 acetoacetyl-CoA reduc 62.3 1.1E+02 0.0024 27.0 11.6 79 192-277 8-91 (247)
486 PRK09242 tropinone reductase; 62.2 1.2E+02 0.0025 27.2 12.7 98 191-295 10-115 (257)
487 PRK06200 2,3-dihydroxy-2,3-dih 62.0 71 0.0015 28.8 9.6 80 191-276 7-86 (263)
488 KOG1199 Short-chain alcohol de 61.9 41 0.00089 29.1 7.2 76 194-275 13-88 (260)
489 COG1105 FruK Fructose-1-phosph 61.8 1.5E+02 0.0032 28.2 12.7 64 249-315 108-171 (310)
490 PRK06463 fabG 3-ketoacyl-(acyl 61.7 1.2E+02 0.0026 27.1 12.4 79 191-277 8-86 (255)
491 PLN02955 8-amino-7-oxononanoat 61.1 1.9E+02 0.0042 29.3 13.7 137 160-314 109-261 (476)
492 PRK06197 short chain dehydroge 60.9 88 0.0019 29.0 10.3 79 192-277 18-102 (306)
493 PRK07035 short chain dehydroge 60.7 1.2E+02 0.0027 26.9 12.7 81 191-277 9-92 (252)
494 PF02571 CbiJ: Precorrin-6x re 60.4 28 0.00061 31.9 6.5 95 192-307 2-97 (249)
495 PF01301 Glyco_hydro_35: Glyco 60.2 9.6 0.00021 36.3 3.5 60 250-309 19-82 (319)
496 PRK08993 2-deoxy-D-gluconate 3 60.0 1.3E+02 0.0028 26.9 13.0 82 191-279 11-93 (253)
497 PRK07890 short chain dehydroge 60.0 1.3E+02 0.0027 26.8 10.9 81 191-277 6-89 (258)
498 TIGR00649 MG423 conserved hypo 59.8 85 0.0019 31.0 10.4 97 191-304 287-401 (422)
499 COG1648 CysG Siroheme synthase 59.7 1E+02 0.0023 27.4 9.9 102 187-317 9-113 (210)
500 PRK05650 short chain dehydroge 59.3 1.4E+02 0.003 27.0 11.3 79 193-277 3-84 (270)
No 1
>PLN02231 alanine transaminase
Probab=100.00 E-value=4.2e-62 Score=491.44 Aligned_cols=355 Identities=82% Similarity=1.233 Sum_probs=302.5
Q ss_pred CchhhhcccccccccccccccC--cC-Cccccccccc---cccccccCCCCCCCCCCCCCcccccccChhhhccccchhc
Q 018147 1 MRRFVIGRGRNFLNRSHQQNLL--SS-SSSHCQSRFL---SSTSVIDSPSSSSMAPTSSPAITVDSLNPKVLKCEYAVRG 74 (360)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (360)
|++++.++.+++.++|..-... +. +..|++.++. ++++. ++ ..+.++...+|+++||++|.+++|++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~y~vrg 75 (534)
T PLN02231 1 MRRFLINQAKGLVDHSRRQHHKSPSFLSPQPRPLASLSRFSSTSE-MS----ASDSTSSLPVTLDTINPKVLKCEYAVRG 75 (534)
T ss_pred CchHHHhHHHHHHHHhhhhhhcCCCCCCCCCCchhHHHhhhhhhh-cc----cccccCCCcCChhhcCHHHHHhhhhccc
Confidence 8888888888887765433111 11 2223332221 11111 11 1233466789999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHc
Q 018147 75 EIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQ 154 (360)
Q Consensus 75 ~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~ 154 (360)
+|+.+|++++++|+++++++||++||++|||||+.++|+|++|+|+++++++.|+++++..++..+|.++++++.+.+.+
T Consensus 76 ~~~~~a~~~~~~~~~~~~~~pf~~~~~~nig~p~~~~~~~~~~~r~v~~~~~~p~~i~~~~~~~~fp~~~i~~a~~~l~~ 155 (534)
T PLN02231 76 EIVTIAQRLQEELKTNPGSYPFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSLLDKSETHGLFSADAIERAWQILDQ 155 (534)
T ss_pred hHHHHHHHHHHHHhcCCCcCChhhhhhhccCCHHHcCCCccHHHHHHHHhccCCccCCCCCccccCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999888876
Q ss_pred CCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHH
Q 018147 155 IPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL 234 (360)
Q Consensus 155 ~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~ 234 (360)
.......+|+++.|.++||++||+|+.+++|+++++++|++|+|+++|+..++++++..+||+|+++.|+|+.|...++.
T Consensus 156 ~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~ 235 (534)
T PLN02231 156 IPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIAL 235 (534)
T ss_pred cCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHH
Confidence 53224778999999999999999999999999999999999999999999999999844799999999999999999999
Q ss_pred cCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 235 HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 235 ~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
+|++++.++++++++|++|+++|++++++.+.++.++|+|+++|||||||.+++.+++++|+++|+++|++||+||+|++
T Consensus 236 ~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~ 315 (534)
T PLN02231 236 HGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQE 315 (534)
T ss_pred cCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchh
Confidence 99999999999888899999999999987666666799999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc--ccccccC
Q 018147 315 NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY--FHFFSKW 360 (360)
Q Consensus 315 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~--g~~RvGw 360 (360)
++|++..++.++.++...++..+.++++|+++||||+|. +|+|+||
T Consensus 316 l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy 363 (534)
T PLN02231 316 NVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGY 363 (534)
T ss_pred cccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEE
Confidence 999654468888887654432123447999999999875 6999999
No 2
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.7e-63 Score=453.90 Aligned_cols=300 Identities=58% Similarity=0.933 Sum_probs=288.3
Q ss_pred CCCCCcccccccChhhhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCC
Q 018147 50 PTSSPAITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPS 129 (360)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~ 129 (360)
+.+.+.+|.+++|++|.+++|++||+|..||.|++++|++| .++||++||++|||||+.+||+|++|+|||+++|.+|.
T Consensus 2 ~~~~~~lt~~~~N~~V~k~eYAVRG~i~~rA~El~~eL~~~-~~~PF~eiI~aNIGnpqamgQ~PiTF~RQvlal~~~p~ 80 (475)
T KOG0258|consen 2 FRSAKALTLDSLNPNVKKAEYAVRGPIVIRADELEKELKKG-VKKPFDEIIRANIGNPQAMGQKPITFLRQVLALCQYPE 80 (475)
T ss_pred CccccccchhhcChhhhhhhhhhccchhhhHHHHHHHHHhc-ccCChHHHHhhcCCCHHHhCCCChhHHHHHHHHhcChh
Confidence 34667899999999999999999999999999999999999 67999999999999999999999999999999999999
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHH
Q 018147 130 ILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQL 209 (360)
Q Consensus 130 ~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~ 209 (360)
++|.++ +|.++++++...+...++ +.+.|+.++|++-+|+.+|+|+.+|+|.+++|++|++|.|++.|+..++..
T Consensus 81 lLd~~~----fp~Dai~RA~~~L~~~gG-s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l 155 (475)
T KOG0258|consen 81 LLDSPE----FPTDAIKRAKRILNDCGG-SLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSL 155 (475)
T ss_pred hcCCCC----CCHHHHHHHHHHHHhcCC-cccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHH
Confidence 999876 999999999999999886 799999999999999999999999999999999999999999999999999
Q ss_pred HccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCH
Q 018147 210 LIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (360)
Q Consensus 210 l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~ 289 (360)
++.++++.|++|.|+||.|...+..+|+..+.|.++++.+|.+|.++|++.+.+++ ++.++++++++||.||||+++++
T Consensus 156 ~~~~~~~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~ 234 (475)
T KOG0258|consen 156 LIAGKKTGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSE 234 (475)
T ss_pred HhcCCCCceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcH
Confidence 99889999999999999999999999999999999999999999999999999988 88999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCC-CceEEEEeccCcCccccc
Q 018147 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK-DISLVSFQSVSKGRYFHF 356 (360)
Q Consensus 290 ~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~i~~~S~SK~~~g~~ 356 (360)
+.+++|+.+|.+++++++.||+|++++|.+..+|+|+++++.+|+..|+ ++.++.++|.||++.|+|
T Consensus 235 e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gEC 302 (475)
T KOG0258|consen 235 ENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGEC 302 (475)
T ss_pred HHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeee
Confidence 9999999999999999999999999999987789999999999998887 889999999999999865
No 3
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=3.2e-53 Score=424.72 Aligned_cols=307 Identities=51% Similarity=0.860 Sum_probs=275.8
Q ss_pred CCcccccccChhhhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccc
Q 018147 53 SPAITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILD 132 (360)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~ 132 (360)
++.++++++|+++.+++|++++++..+|+++++++++|++++|+.+||+|+||+|+.+|++|.+++|++++....|++|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~ 81 (481)
T PTZ00377 2 MKSFTVEDINPRVVAAEYAVRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLE 81 (481)
T ss_pred CCcCCccccCHHHhhhhhhcCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhc
Confidence 46789999999999999999999999999999999999888999999999999998889999999999999999999999
Q ss_pred cCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc
Q 018147 133 RSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR 212 (360)
Q Consensus 133 ~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~ 212 (360)
++.+...+|..+++++.+.++.... ....|++..|.++||+++|+++.+++|+.+++++|++|+|+++++..++++++.
T Consensus 82 ~~~~~~~~P~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~ 160 (481)
T PTZ00377 82 DPSVSSLFPADVVARAKEYLNAIGG-GTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIG 160 (481)
T ss_pred CccccccCCHHHHHHHHHHHHhCCC-cccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcc
Confidence 9988888999999998877766432 367899999999999999999999999999999999999999999999999973
Q ss_pred CCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHH
Q 018147 213 SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQ 292 (360)
Q Consensus 213 ~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l 292 (360)
++||+|+++.|+|+.|...++.+|++++.++++++++|++|+++|++++++..+++.++|+|+++|||||||.+++.+++
T Consensus 161 ~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~ 240 (481)
T PTZ00377 161 DPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVM 240 (481)
T ss_pred CCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHH
Confidence 39999999999999999999999999999999988889999999999998755555579999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCC-CceEEEEeccCcCc-c-ccccccC
Q 018147 293 RAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK-DISLVSFQSVSKGR-Y-FHFFSKW 360 (360)
Q Consensus 293 ~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~i~~~S~SK~~-~-g~~RvGw 360 (360)
++|+++|+++|++||+||+|.+++|++..++.++.+...++...++ +.++|+++||||++ + +|+|+||
T Consensus 241 ~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~ 311 (481)
T PTZ00377 241 EEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGY 311 (481)
T ss_pred HHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEE
Confidence 9999999999999999999999999654357787766555543221 23689999999986 4 7999999
No 4
>PLN02368 alanine transaminase
Probab=100.00 E-value=1.9e-50 Score=395.33 Aligned_cols=297 Identities=52% Similarity=0.880 Sum_probs=253.2
Q ss_pred CcccccccChhhhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCcccc
Q 018147 54 PAITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDR 133 (360)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~ 133 (360)
+.++++.+|+++.+++++.++.+..+|.++++++ .+||+|++|+|++.||+|.+|.|||+++++++-.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g---------~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (407)
T PLN02368 4 KALDYESLNENVKKCQYAVRGELYLRASELQKEG---------KKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDD 74 (407)
T ss_pred CCCChhhcCHHHHhhhhhcCCHHHHHHHHHHHHh---------hhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCC
Confidence 4588999999999999999999999999998874 4899999999999999999999999999998644432
Q ss_pred CccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccC
Q 018147 134 SETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS 213 (360)
Q Consensus 134 ~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~ 213 (360)
......+|++.++++...+..... ....|++..|.++||+++|+|+.+++|+.+++++|++|+|+++++..++.+++.+
T Consensus 75 p~~~~~~p~~~i~~a~~~l~~~~~-~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~ 153 (407)
T PLN02368 75 PNVGLLFPADAIARAKHYLSLTSG-GLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRG 153 (407)
T ss_pred ccccccCCHHHHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCC
Confidence 221123577777776655532211 3678999999999999999999998899999999999999999999999988734
Q ss_pred CCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHH
Q 018147 214 ENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQR 293 (360)
Q Consensus 214 ~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~ 293 (360)
+||+|++++|+|+.|...++.+|++++.++++++++|++|++.|++++++...++.++|+++++|||||||.+++.++++
T Consensus 154 pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~ 233 (407)
T PLN02368 154 EKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLR 233 (407)
T ss_pred CCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHH
Confidence 99999999999999999999999999999998887899999999999986544445789999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCC-CCceEEEEeccCcCcc--ccccccC
Q 018147 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE-KDISLVSFQSVSKGRY--FHFFSKW 360 (360)
Q Consensus 294 ~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~-~~~~~i~~~S~SK~~~--g~~RvGw 360 (360)
+|+++|+++|++||+||+|.+++|++..++.|+.++..++...+ .+.++|+++||||+|+ +|+|+||
T Consensus 234 ~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy 303 (407)
T PLN02368 234 EILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGY 303 (407)
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEE
Confidence 99999999999999999999999986435678776654443111 1237999999999985 8999999
No 5
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-44 Score=349.87 Aligned_cols=240 Identities=28% Similarity=0.490 Sum_probs=209.2
Q ss_pred ccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHH
Q 018147 67 KCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIE 146 (360)
Q Consensus 67 ~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~ 146 (360)
+..+.....+...+.++.+.. . + .++|+|++|+|++ ..|+.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~---~---~-~~vi~l~iG~Pd~-----------------------------~~p~~i~~ 48 (393)
T COG0436 5 KVLPSYTFAVLAEAKAAAELK---G---K-EDVIDLSIGEPDF-----------------------------PTPEHIIE 48 (393)
T ss_pred ccCcchhHHHHhHHHHHHHhc---C---C-CCEEEeCCCCCCC-----------------------------CCCHHHHH
Confidence 334455555566555555552 1 1 4799999999998 56889999
Q ss_pred HHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCC-EEEcCChHHHHHHHHHHHccCCCCEEEEcCCCc
Q 018147 147 RAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPND-IFLTDGASPAVHMMMQLLIRSENDGILCPIPQY 225 (360)
Q Consensus 147 ~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~-I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y 225 (360)
++.+.+.+.. . .|.+..|+++||++||+++.+++|..+++++ |++|+|+++|+..++.+++ +|||+|++++|.|
T Consensus 49 a~~~a~~~~~---~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~-~pGDeVlip~P~Y 123 (393)
T COG0436 49 AAIEALEEGG---T-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALL-NPGDEVLIPDPGY 123 (393)
T ss_pred HHHHHHhccc---C-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhc-CCCCEEEEeCCCC
Confidence 9998887742 2 6889999999999999999999999999987 9999999999999999999 5999999999999
Q ss_pred hHHHHHHHHcCCeEEEeecCCC-CCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCC
Q 018147 226 PLYSASIALHGGTLVPYYLDEA-TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGL 304 (360)
Q Consensus 226 ~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i 304 (360)
+.|...++.+|++++.++++.+ ++|.+|+++|++++++ ++|+|+||+||||||.+++++++++|+++|++||+
T Consensus 124 ~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~------ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i 197 (393)
T COG0436 124 PSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP------KTKAIILNSPNNPTGAVYSKEELKAIVELAREHDI 197 (393)
T ss_pred cCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc------cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCe
Confidence 9999999999999999998765 4899999999999998 89999999999999999999999999999999999
Q ss_pred EEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 305 VLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 305 ~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
+||+||+|.+++|++. +++|+....+. .+ ++|+++||||+|+ .|+||||
T Consensus 198 ~ii~DEiY~~l~yd~~-~~~s~~~~~~~-----~~-~~i~i~s~SK~~~mtGwRvG~ 247 (393)
T COG0436 198 IIISDEIYEELVYDGA-EHPSILELAGA-----RD-RTITINSFSKTYGMTGWRIGW 247 (393)
T ss_pred EEEEehhhhhcccCCC-CcCCHhhcCCC-----cc-eEEEEecccccccccccceeE
Confidence 9999999999999985 47787766431 13 7999999999997 6999999
No 6
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=3.6e-41 Score=340.39 Aligned_cols=246 Identities=30% Similarity=0.515 Sum_probs=216.5
Q ss_pred ccChhhhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCC
Q 018147 60 SLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGL 139 (360)
Q Consensus 60 ~~~~~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~ 139 (360)
.+++++.++.+++++.+...+.++++++ .++|+|++|+|...+. .
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g---------~~~i~l~~G~p~~~~~--------------------------~ 162 (517)
T PRK13355 118 KKSHKLDNVLYDVRGPVVDEANRMEAAG---------THILKLNIGNPAPFGF--------------------------R 162 (517)
T ss_pred ChhHHhhccCccHHHHHHHHHHHHHHcC---------CCeEEecCcCCCcCCC--------------------------C
Confidence 3789999999999999999998886652 4899999999974321 3
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEE
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGIL 219 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vl 219 (360)
.|+.+++++.+.+.. ...|++..|.++||++||+++.++++..+++++|++|+|+++++.+++.+++ ++||+|+
T Consensus 163 ~p~~~~~~~~~~~~~-----~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~-~~Gd~Vl 236 (517)
T PRK13355 163 TPDEVVYDMAQQLTD-----TEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALL-DDGDEVL 236 (517)
T ss_pred CCHHHHHHHHHHhhc-----CCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhC-CCCCEEE
Confidence 488888888777653 3479999999999999999998877767899999999999999999999998 5999999
Q ss_pred EcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHH
Q 018147 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (360)
Q Consensus 220 v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la 299 (360)
++.|+|+.|...++.+|++++.++++++++|.+|++++++++++ ++|+|+++|||||||.+++.+++++|+++|
T Consensus 237 i~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~------~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a 310 (517)
T PRK13355 237 IPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITS------RTKAIVIINPNNPTGALYPREVLQQIVDIA 310 (517)
T ss_pred EcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCc------CceEEEEECCCCCCCcCcCHHHHHHHHHHH
Confidence 99999999999999999999999998887899999999998876 799999999999999999999999999999
Q ss_pred HHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCc-cccccccC
Q 018147 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 300 ~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
++|+++||+||+|.+++|++. ++.++..+. +++.+|+++||||.| .+|+|+||
T Consensus 311 ~~~~~~ii~DE~Y~~~~~~~~-~~~s~~~~~-------~~~~vi~~~S~SK~~~~~G~RiG~ 364 (517)
T PRK13355 311 REHQLIIFSDEIYDRLVMDGL-EHTSIASLA-------PDLFCVTFSGLSKSHMIAGYRIGW 364 (517)
T ss_pred HHcCcEEEEehhhhhhcCCCC-CcccHHHhC-------CCCeEEEEecchhhccCcccceEE
Confidence 999999999999999999764 466766542 354688899999998 57999999
No 7
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-41 Score=316.84 Aligned_cols=239 Identities=25% Similarity=0.377 Sum_probs=212.3
Q ss_pred ChhhhccccchhchHHHHHHHHHHHHhcCCCCCCccccee-ccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCC
Q 018147 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILY-CNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (360)
Q Consensus 62 ~~~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~-l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~ 140 (360)
|+++...++.++-++..++.|. ++.+ |++|.|+. ..
T Consensus 9 ~~~l~~~~~~vw~e~~~la~e~--------------~~~~~LgqGfp~~-----------------------------~~ 45 (420)
T KOG0257|consen 9 NRNLSTSKPYVWTEINRLAAEH--------------KVPNPLGQGFPDF-----------------------------PP 45 (420)
T ss_pred cccccccCCcHHHHHHHHHHhc--------------CCCCcccCCCCCC-----------------------------CC
Confidence 4555666677777777777653 3334 99999998 45
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHccCCCCEEE
Q 018147 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGIL 219 (360)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~I~~t~Ga~~al~~~~~~l~~~~gd~Vl 219 (360)
|.-+.+++.+.+.+. ..++|.+..|+++|++++++.+++.+|....++ +|++|.|+.++|..++..++ ++||+|+
T Consensus 46 P~fv~ea~~~~~~~~---~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~-~~GDeVi 121 (420)
T KOG0257|consen 46 PKFVTEAAKNAAKEP---STNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLL-NPGDEVI 121 (420)
T ss_pred cHHHHHHHHHHhccc---hhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHc-CCCCEEE
Confidence 777888888888775 378999999999999999999999888777766 69999999999999999999 5999999
Q ss_pred EcCCCchHHHHHHHHcCCeEEEeecC------CCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHH
Q 018147 220 CPIPQYPLYSASIALHGGTLVPYYLD------EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQR 293 (360)
Q Consensus 220 v~~P~y~~~~~~~~~~g~~~~~v~~~------~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~ 293 (360)
+.+|.|..|...++++|++++.+++. ..++|.+|.++|+.++++ ++|+|++|+||||||.++++++|+
T Consensus 122 i~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~------kTk~Ii~ntPhNPtGkvfsReeLe 195 (420)
T KOG0257|consen 122 VFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE------KTKAIILNTPHNPTGKVFSREELE 195 (420)
T ss_pred EecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccC------CccEEEEeCCCCCcCcccCHHHHH
Confidence 99999999999999999999999988 456899999999999998 899999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc-cccccC
Q 018147 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFSKW 360 (360)
Q Consensus 294 ~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~RvGw 360 (360)
+|+++|++||+++|.||+|..++|++. ++..+..+ ++|.+ ++|.++|+||+|+- |+|+||
T Consensus 196 ~ia~l~~k~~~lvisDevYe~~v~d~~-~h~r~asl-Pgm~e-----rtitvgS~gKtf~~TGWrlGW 256 (420)
T KOG0257|consen 196 RIAELCKKHGLLVISDEVYEWLVYDGN-KHIRIASL-PGMYE-----RTITVGSFGKTFGVTGWRLGW 256 (420)
T ss_pred HHHHHHHHCCEEEEEhhHhHHHhhCCC-cceeeecC-Cchhh-----eEEEeccccceeeeeeeeeee
Confidence 999999999999999999999999986 57888777 88775 89999999999987 999999
No 8
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.4e-39 Score=317.96 Aligned_cols=245 Identities=21% Similarity=0.275 Sum_probs=202.5
Q ss_pred ChhhhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCC
Q 018147 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (360)
Q Consensus 62 ~~~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p 141 (360)
++++..++..++..+...+++.++. + .++|++++|+|.+ .+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~i~l~~~~~~~-----------------------------~~~ 45 (388)
T PRK07366 4 AQRLQPLQSNVFADMDRAKAQARAA----G-----KELIDLSLGSSDL-----------------------------PAP 45 (388)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHhc----C-----CCeEEeCCCCCCC-----------------------------CCC
Confidence 3455555555554444444444443 1 3799999999986 457
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHccCCCCEEEE
Q 018147 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILC 220 (360)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv 220 (360)
+.+.+++.+.+... ....|++..|.++||+++|+|+.+++|+.++++ +|++|+|+++++..++++++. +||+|++
T Consensus 46 ~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~-~gd~Vlv 121 (388)
T PRK07366 46 AHALEAIAQSLHDP---STHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLN-PGDFALL 121 (388)
T ss_pred HHHHHHHHHHHhCc---ccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCC-CCCEEEE
Confidence 77888887766542 256799999999999999999999999999998 699999999999999999994 9999999
Q ss_pred cCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHH
Q 018147 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (360)
Q Consensus 221 ~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~ 300 (360)
++|+|+.|...++..|++++.++++++++|.+|++++++.+.+ ++|+++++|||||||.+++.+++++|+++|+
T Consensus 122 ~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~ 195 (388)
T PRK07366 122 LDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLA------QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQ 195 (388)
T ss_pred cCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcc------cceEEEEeCCCCCCCccCCHHHHHHHHHHHH
Confidence 9999999999999999999999998777789999999887765 6899999999999999999999999999999
Q ss_pred HcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 301 ~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++|++||+||+|.++.|++.....++..... ..+ ++|+++||||.|+ +|+|+||
T Consensus 196 ~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~-----~~~-~vi~~~SfSK~~g~~GlRiG~ 250 (388)
T PRK07366 196 QHDLVLVHDFPYVDLVFDGEVEPPSILQADP-----EKS-VSIEFFTLSKSYNMGGFRIGF 250 (388)
T ss_pred HcCeEEEEecchhhcccCCCCCCCChhhCCC-----Ccc-cEEEEeecccccCCcchhhee
Confidence 9999999999999999876422445544321 012 5899999999995 8999999
No 9
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=3.7e-39 Score=315.73 Aligned_cols=249 Identities=24% Similarity=0.368 Sum_probs=201.3
Q ss_pred ChhhhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCC
Q 018147 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (360)
Q Consensus 62 ~~~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p 141 (360)
++++.+++..+...+...++++.+. .+ .++|++++|+|++ .+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~i~l~~~~p~~-----------------------------~~~ 44 (396)
T PRK09147 2 NPRLDRLQPYPFEKLRALFAGVTPP----AD----LPPISLSIGEPKH-----------------------------PTP 44 (396)
T ss_pred cchhhcCCcchHHHHHHHHHhhhhc----cC----CCeEecCCCCCCC-----------------------------CCC
Confidence 3445556666555555555444221 12 5899999999987 346
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCC-CCCC-CEEEcCChHHHHHHHHHHHccCC---CC
Q 018147 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFP-ADPN-DIFLTDGASPAVHMMMQLLIRSE---ND 216 (360)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~-~~~~-~I~~t~Ga~~al~~~~~~l~~~~---gd 216 (360)
+.+.+++.+.+.. ...|++..|.++||+++|+++.+++|+. ++++ +|++|+|+++++..++++++. + ||
T Consensus 45 ~~~~~~~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~-~~~~gd 118 (396)
T PRK09147 45 AFIKDALAANLDG-----LASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVID-RDGPGP 118 (396)
T ss_pred HHHHHHHHHHhhh-----hcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcC-CCCCCC
Confidence 6677777666542 5679999999999999999999999988 8986 899999999999999999994 8 89
Q ss_pred EEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHH
Q 018147 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (360)
Q Consensus 217 ~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~ 296 (360)
.|+++.|+|+.|...++..|++++.+|++++++|++|++.+++.+.+ ++|+++++|||||||.+++.+++++|+
T Consensus 119 ~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~------~~k~i~l~nP~NPTG~~~s~~~~~~l~ 192 (396)
T PRK09147 119 LVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWA------RTQLLFVCSPGNPTGAVLPLDDWKKLF 192 (396)
T ss_pred EEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhh------ccEEEEEcCCCCCcCccCCHHHHHHHH
Confidence 99999999999999999999999999998777899999999988865 799999999999999999999999999
Q ss_pred HHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCc-cccccccC
Q 018147 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 297 ~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
++|++|+++||+||+|.++.|++..+..+.......+.....+ ++|+++||||.| .+|+|+||
T Consensus 193 ~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vi~~~S~SK~~~~~GlRiG~ 256 (396)
T PRK09147 193 ALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFK-RLVVFHSLSKRSNVPGLRSGF 256 (396)
T ss_pred HHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccc-cEEEEeccccccCCccceeee
Confidence 9999999999999999999987631233332221222110112 689999999987 67999999
No 10
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5e-39 Score=315.12 Aligned_cols=244 Identities=18% Similarity=0.257 Sum_probs=202.5
Q ss_pred cChhhhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCC
Q 018147 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (360)
Q Consensus 61 ~~~~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~ 140 (360)
+++++.++.......+...+.+.+.. + .++|++++|+|+. ..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~i~l~~g~p~~-----------------------------~~ 46 (399)
T PRK07681 5 LATRMKAFQSSIFSELGAYKKEKIAA----G-----HKMIDLSIGNPDM-----------------------------PP 46 (399)
T ss_pred HhHHHhhcCccHHHHHHHHHHHhhhc----C-----CCeEEeCCCCCCC-----------------------------CC
Confidence 34566666666665555555544332 1 4799999999986 34
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHHccCCCCEEE
Q 018147 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGIL 219 (360)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~I~~t~Ga~~al~~~~~~l~~~~gd~Vl 219 (360)
++.+.+++.+.+... ....|+ ..|.++||+++|+|+.+++|+.+++ ++|++|+|+++++..++.+++. +||+|+
T Consensus 47 ~~~~~~~~~~~~~~~---~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~-~Gd~Vl 121 (399)
T PRK07681 47 ADFVREEMVHTANQK---ESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYAN-PGDIIL 121 (399)
T ss_pred CHHHHHHHHHHHhcc---ccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCC-CCCEEE
Confidence 666777777666542 244565 4799999999999999999999998 8999999999999999999994 999999
Q ss_pred EcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHH
Q 018147 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (360)
Q Consensus 220 v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la 299 (360)
+++|+|+.|...++.+|++++.++++++++|.+|++++++++.+ ++++|+++|||||||.+++.+++++|+++|
T Consensus 122 v~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a 195 (399)
T PRK07681 122 VPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIAD------KAKMMILNFPGNPVPAMAHEDFFKEVIAFA 195 (399)
T ss_pred ECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccc------cceEEEEeCCCCCcCcCCCHHHHHHHHHHH
Confidence 99999999999999999999999998777899999999998865 799999999999999999999999999999
Q ss_pred HHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 300 ~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
+++|++||+||+|.++.|++. ++.++.++.. ..+ ++|+++||||.|+ +|+|+||
T Consensus 196 ~~~~~~iI~De~y~~~~~~~~-~~~~~~~~~~-----~~~-~~i~~~S~SK~~~~~GlRiG~ 250 (399)
T PRK07681 196 KKHNIIVVHDFAYAEFYFDGN-KPISFLSVPG-----AKE-VGVEINSLSKSYSLAGSRIGY 250 (399)
T ss_pred HHcCeEEEEeccchhheeCCC-CCCChhhCCC-----Ccc-cEEEEeecccccCCccceeEE
Confidence 999999999999999998764 3555554321 123 5899999999997 8999999
No 11
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1.2e-38 Score=315.44 Aligned_cols=221 Identities=25% Similarity=0.405 Sum_probs=187.3
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
.+++++++|+|+..+. .+|+.+.+++.+.+.+. ...+|++..|.++||+++
T Consensus 32 ~~~~~~~~G~p~~~~~--------------------------~~p~~~~~a~~~~~~~~---~~~~Y~~~~G~~~LReai 82 (433)
T PRK06855 32 VKITWENIGDPIAKGE--------------------------KIPDWMKEIVAELVMDD---KSYGYCPTKGVLETREFL 82 (433)
T ss_pred ccccccccCCCcccCC--------------------------CCCHHHHHHHHHHhhcC---CCCCCCCCCCCHHHHHHH
Confidence 4799999999964222 34666777776666442 367899999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHH-HHcCCeEEEeecCCCCCcCCCHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI-ALHGGTLVPYYLDEATGWGLETS 255 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~-~~~g~~~~~v~~~~~~~~~~d~~ 255 (360)
|+|+.+++|+.+++++|++|+|++++|..++. ++ ++||.|++++|+|+.|.... ...|++++.++++++++|++|++
T Consensus 83 a~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l~-~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~ 160 (433)
T PRK06855 83 AELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-LL-RREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLD 160 (433)
T ss_pred HHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-hc-CCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHH
Confidence 99999999999999999999999999999985 66 59999999999999987653 45689999999987778999999
Q ss_pred HHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCC
Q 018147 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (360)
Q Consensus 256 ~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~ 335 (360)
+|+++++. ..++++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++. ++.++.++.+
T Consensus 161 ~l~~~~~~----~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~-~~~sl~~~~~---- 231 (433)
T PRK06855 161 DLENKVKY----NPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGK-KTVPLSEVIG---- 231 (433)
T ss_pred HHHHHHhc----CCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCCCHHHHcC----
Confidence 99998863 11578999999999999999999999999999999999999999999999764 4667766532
Q ss_pred CCCCceEEEEeccCcCcc-ccccccC
Q 018147 336 GEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 336 ~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
+.++|+++||||.|+ +|+|+||
T Consensus 232 ---~~~~I~~~S~SK~~~~pGlRiG~ 254 (433)
T PRK06855 232 ---DVPGIALKGISKELPWPGSRCGW 254 (433)
T ss_pred ---cCCeEEEecCccccCCCcceEEE
Confidence 225799999999996 9999999
No 12
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2.7e-38 Score=309.31 Aligned_cols=249 Identities=21% Similarity=0.349 Sum_probs=203.6
Q ss_pred ChhhhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCC
Q 018147 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (360)
Q Consensus 62 ~~~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p 141 (360)
|+++..++......+...+.++... ...++|++++|+|+. .+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~l~~~~p~~-----------------------------~~~ 43 (393)
T TIGR03538 1 NPNLSRLQPYPFEKLAALLAGVTPP--------ASKPPIALSIGEPKH-----------------------------PTP 43 (393)
T ss_pred CchhhhCCccHHHHHHHHHHhhhhh--------cCCCeEEecCCCCCC-----------------------------CCC
Confidence 4556666666666667776655332 114899999999987 457
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCC--CCCC-CEEEcCChHHHHHHHHHHHccCCCCE-
Q 018147 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFP--ADPN-DIFLTDGASPAVHMMMQLLIRSENDG- 217 (360)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~--~~~~-~I~~t~Ga~~al~~~~~~l~~~~gd~- 217 (360)
+.+.+++.+.+.. ...|++..|.++||+++|+|+.+++|++ ++++ +|++|+|+++++..++++++ ++||+
T Consensus 44 ~~~~~a~~~~~~~-----~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~-~~gd~~ 117 (393)
T TIGR03538 44 AFVLEALRENLHG-----LSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVI-NPGQAP 117 (393)
T ss_pred HHHHHHHHHHhhc-----cCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHc-CCCCcc
Confidence 7777777766542 5679999999999999999999988876 7885 79999999999999999999 49986
Q ss_pred -EEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHH
Q 018147 218 -ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (360)
Q Consensus 218 -Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~ 296 (360)
|+++.|+|+.|...++..|++++.++++++++|.+|++++++++.+ ++|+|+++|||||||.+++.+++++|+
T Consensus 118 ~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~i~l~~p~NPtG~~~s~~~~~~l~ 191 (393)
T TIGR03538 118 LVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWR------RCQLLFVCSPGNPTGAVLSLDTLKKLI 191 (393)
T ss_pred eEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhh------cceEEEEeCCCCCcCcccCHHHHHHHH
Confidence 9999999999999999999999999998777899999999998876 789999999999999999999999999
Q ss_pred HHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCc-cccccccC
Q 018147 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 297 ~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
++|+++|++||+||+|.++.|++..++.++......++....+ ++|+++||||.| .+|+|+||
T Consensus 192 ~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vi~i~S~SK~~~~~GlRvG~ 255 (393)
T TIGR03538 192 ELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFR-RCLVFHSLSKRSNLPGLRSGF 255 (393)
T ss_pred HHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccc-cEEEEecchhhcCCcccceEE
Confidence 9999999999999999999887522344443332222210112 689999999986 57999998
No 13
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=3.5e-38 Score=310.31 Aligned_cols=237 Identities=22% Similarity=0.375 Sum_probs=200.5
Q ss_pred cChhhhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCC
Q 018147 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (360)
Q Consensus 61 ~~~~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~ 140 (360)
+++++..+....+..+...+ .. .++|++++|+|+. ..
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~----~~----------~~~i~l~~G~P~~-----------------------------~~ 68 (413)
T PLN00175 32 VAKRLEKFKTTIFTQMSSLA----IK----------HGAINLGQGFPNF-----------------------------DG 68 (413)
T ss_pred hhHHhhcCCCCHHHHHHHHh----hc----------CCeEecCCCCCCC-----------------------------CC
Confidence 45666666666554433332 11 3799999999997 34
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHccCCCCEEE
Q 018147 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGIL 219 (360)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~I~~t~Ga~~al~~~~~~l~~~~gd~Vl 219 (360)
|+.+.+++.+.+.+ ....|++..|.++||+++++++.+++|+.++++ +|++|+|+++|+..++..++ ++||+|+
T Consensus 69 ~~~~~~~~~~~~~~----~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~-~~gd~Vl 143 (413)
T PLN00175 69 PDFVKEAAIQAIRD----GKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLI-NPGDEVI 143 (413)
T ss_pred CHHHHHHHHHHHhc----CCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhC-CCCCEEE
Confidence 67777777777765 256899999999999999999999999999998 79999999999999999998 5999999
Q ss_pred EcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHH
Q 018147 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (360)
Q Consensus 220 v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la 299 (360)
+++|+|+.|...++..|++++.+++++++ |.+|+++|++.+.+ ++|+|+++|||||||.+++.+++++|+++|
T Consensus 144 v~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~~~~l~~~~~~------~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a 216 (413)
T PLN00175 144 LFAPFYDSYEATLSMAGAKIKTVTLRPPD-FAVPEDELKAAFTS------KTRAILINTPHNPTGKMFTREELELIASLC 216 (413)
T ss_pred EeCCCchhHHHHHHHcCCEEEEEECCccc-CCCCHHHHHHhcCc------CceEEEecCCCCCCCcCCCHHHHHHHHHHH
Confidence 99999999999999999999999997654 89999999998876 789999999999999999999999999999
Q ss_pred HHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 300 ~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++++++||+||+|.++.|++. +.++.++. .+ .+ ++|+++||||.|+ +|+|+||
T Consensus 217 ~~~~~~ii~De~Y~~l~~~~~--~~s~~~~~-~~----~~-~vi~i~SfSK~~~~~G~RiG~ 270 (413)
T PLN00175 217 KENDVLAFTDEVYDKLAFEGD--HISMASLP-GM----YE-RTVTMNSLGKTFSLTGWKIGW 270 (413)
T ss_pred HHcCcEEEEecccCccccCCc--ccChhhCC-CC----cC-cEEEEecchhhccCcchheee
Confidence 999999999999999998653 55655442 11 12 6899999999998 8999999
No 14
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=3.1e-38 Score=310.43 Aligned_cols=221 Identities=23% Similarity=0.379 Sum_probs=191.6
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+++|+|++|+|+..+. ...|+.+.+++.+.+.+. ....|++..|.++||+++
T Consensus 32 ~~~i~l~~G~p~~~~~-------------------------~~~p~~~~~a~~~~~~~~---~~~~Y~~~~G~~~lr~ai 83 (409)
T PLN00143 32 RLAISFGFGDPSCFEC-------------------------FRTTNIAEDAIVEAVRSA---KFNSYAPTGGILPARRAI 83 (409)
T ss_pred CceeeCCCCCCCCCCC-------------------------CCCCHHHHHHHHHHHhCc---CCCCCCCCCCCHHHHHHH
Confidence 6899999999982100 045788888888877653 256799999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
|+|+.+++|+++++++|++|+|+++++.+++++++ ++||.|+++.|+|+.|...++..|++++.++++++++|.+|+++
T Consensus 84 a~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 162 (409)
T PLN00143 84 ADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLA-RPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDA 162 (409)
T ss_pred HHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHc-CCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHH
Confidence 99999999999999999999999999999999999 59999999999999999999999999999999766679999999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
|++++++ ++++++++|||||||.+++.+++++|+++|++++++||+||+|.+++|++. ++.++..+..
T Consensus 163 l~~~~~~------~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~~~~~~~~~----- 230 (409)
T PLN00143 163 VEAIADE------NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSK-PFVPMGLFAS----- 230 (409)
T ss_pred HHHhccc------CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCC-CCcchhhhcc-----
Confidence 9988765 789999999999999999999999999999999999999999999999763 3445443311
Q ss_pred CCCceEEEEeccCcCc-cccccccC
Q 018147 337 EKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
..++|+++||||.| .+|+|+||
T Consensus 231 --~~~vi~~~SfSK~f~~pGlRvG~ 253 (409)
T PLN00143 231 --IVPVITLGSISKRWMIPGWGLGW 253 (409)
T ss_pred --cCcEEEEccchhhcCCCccceEE
Confidence 12689999999995 67999999
No 15
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-38 Score=308.68 Aligned_cols=246 Identities=22% Similarity=0.300 Sum_probs=201.2
Q ss_pred hccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHH
Q 018147 66 LKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSI 145 (360)
Q Consensus 66 ~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~ 145 (360)
..+.....+.+...+.++++. + .+++++++|+|+. ..|+.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~l~~g~p~~-----------------------------~~~~~~~ 52 (403)
T PRK08636 11 KRLPKYVFAEVNELKMAARRA----G-----EDIIDFSMGNPDG-----------------------------PTPQHII 52 (403)
T ss_pred HhCCccHHHHHHHHHHHHHhc----C-----CCEEEcCCcCCCC-----------------------------CCCHHHH
Confidence 344444555566666555543 2 4789999999996 3466677
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCC
Q 018147 146 ERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ 224 (360)
Q Consensus 146 ~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~ 224 (360)
+++.+.+... ....|++..|.++||+++|+|+++++|+.++++ +|++|+|+++++..++++++ ++||+|++++|+
T Consensus 53 ~~~~~~~~~~---~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~ 128 (403)
T PRK08636 53 DKLCESAQKP---KTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAIT-NPGDVAIVPDPA 128 (403)
T ss_pred HHHHHHhcCC---ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhC-CCCCEEEEcCCC
Confidence 7776655432 367899999999999999999999999999998 79999999999999999999 499999999999
Q ss_pred chHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc-CCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcC
Q 018147 225 YPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK-GITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (360)
Q Consensus 225 y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~ 303 (360)
|+.|...++..|++++.++++.+++|++|++.+.+.+++..++ ..++++++++|||||||.+++.+++++|+++|++|+
T Consensus 129 y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~ 208 (403)
T PRK08636 129 YPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKER 208 (403)
T ss_pred CcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999875557899998776666544332 247899999999999999999999999999999999
Q ss_pred CEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCc-cccccccC
Q 018147 304 LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 304 i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
++||+||+|.++.|++. ++.++..+ +. .++ ++|+++||||.| .+|+|+||
T Consensus 209 ~~II~De~Y~~l~~~~~-~~~~~~~~-~~----~~~-~~i~~~S~SK~~~~~GlRiG~ 259 (403)
T PRK08636 209 FYIISDIAYADITFDGY-KTPSILEV-EG----AKD-VAVESYTLSKSYNMAGWRVGF 259 (403)
T ss_pred cEEEEeccchhhccCCC-CCCChhcC-CC----ccc-cEEEEEecccccCCccceeee
Confidence 99999999999998753 35555543 21 134 578899999999 58999999
No 16
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=3.5e-38 Score=307.95 Aligned_cols=238 Identities=23% Similarity=0.315 Sum_probs=205.2
Q ss_pred hhhhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCH
Q 018147 63 PKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (360)
Q Consensus 63 ~~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~ 142 (360)
+++.++.+....++..++.+.+.. + +++|+++.|+|.+ .+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~i~l~~g~~~~-----------------------------~~~~ 48 (387)
T PRK08960 7 RRSRDIEPFHVMALLARANELEAA-----G----HDVIHLEIGEPDF-----------------------------TTAE 48 (387)
T ss_pred hHHHhCCchHHHHHHHHHHHHHhc-----C----CCeEEeCCCCCCC-----------------------------CCCH
Confidence 455566667777777777665443 1 4789999999986 4578
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcC
Q 018147 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222 (360)
Q Consensus 143 ~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~ 222 (360)
.+.+++.+.+... ...|.+..|.+++|+++|+++.+++|+.+++++|++|+|+++++..++.+++ ++||+|++++
T Consensus 49 ~v~~a~~~~~~~~----~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~vlv~~ 123 (387)
T PRK08960 49 PIVAAGQAALAAG----HTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLV-DPGKHWLLAD 123 (387)
T ss_pred HHHHHHHHHHhcC----CCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhc-CCCCEEEEcC
Confidence 8888888877642 4579999999999999999999999999999999999999999999999998 5999999999
Q ss_pred CCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHc
Q 018147 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (360)
Q Consensus 223 P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~ 302 (360)
|+|+.+...++..|.+++.++++++++|.+|++++++++++ +++++++++||||||.+++.+++++|+++|+++
T Consensus 124 p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~ 197 (387)
T PRK08960 124 PGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNA------DTVGALVASPANPTGTLLSRDELAALSQALRAR 197 (387)
T ss_pred CCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCc------cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHc
Confidence 99999999999999999999998777889999999998876 688999999999999999999999999999999
Q ss_pred CCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 303 ~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
|+++|+||+|.++.|++. ..++... ++ ++|+++||||.|+ +|+|+||
T Consensus 198 ~~~li~De~Y~~~~~~~~--~~~~~~~--------~~-~vi~~~S~SK~~g~~GlRiG~ 245 (387)
T PRK08960 198 GGHLVVDEIYHGLTYGVD--AASVLEV--------DD-DAFVLNSFSKYFGMTGWRLGW 245 (387)
T ss_pred CCEEEEEccccccccCCC--CCChhhc--------cC-CEEEEeecccccCCcccEEEE
Confidence 999999999999988653 4444322 12 6899999999996 8999998
No 17
>PLN02187 rooty/superroot1
Probab=100.00 E-value=4.5e-38 Score=313.28 Aligned_cols=221 Identities=24% Similarity=0.425 Sum_probs=193.5
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+++|++++|+|+..+- ...|+++.+++.+.+... ....|++..|.++||+++
T Consensus 66 ~~vi~l~~Gdp~~~p~-------------------------~~~~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lR~ai 117 (462)
T PLN02187 66 KTILPLGHGDPSVYPC-------------------------FRTCIEAEDAVVDVLRSG---KGNSYGPGAGILPARRAV 117 (462)
T ss_pred CCeEECCCCCCCCCCC-------------------------CCCCHHHHHHHHHHHhCC---CCCCCCCCCChHHHHHHH
Confidence 6899999999996210 134677888888877653 246799999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
|+|+.+++|+.+++++|++|+|++++|..++.+++ ++||+|++++|+|+.|...++..|++++.+++.++++|++|+++
T Consensus 118 A~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~ 196 (462)
T PLN02187 118 ADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLA-RPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEG 196 (462)
T ss_pred HHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhc-CCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHH
Confidence 99999989999999999999999999999999999 49999999999999999999999999999999776789999999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
|++++++ ++++++++|||||||.+++.+++++|+++|+++|++||+||+|.+++|++. ++.++..+..
T Consensus 197 l~~~~~~------~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~-~~~s~~~~~~----- 264 (462)
T PLN02187 197 IEAIADE------NTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDN-PFVSMGKFAS----- 264 (462)
T ss_pred HHHhcCC------CcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC-CceeHHHhcc-----
Confidence 9988865 789999999999999999999999999999999999999999999999764 4556654421
Q ss_pred CCCceEEEEeccCcCc-cccccccC
Q 018147 337 EKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
..++|+++||||.| .+|+|+||
T Consensus 265 --~~~vi~l~SfSK~f~~pGlRiG~ 287 (462)
T PLN02187 265 --IVPVLTLAGISKGWVVPGWKIGW 287 (462)
T ss_pred --CCcEEEEecchhhcCCccceeEE
Confidence 22689999999995 57999999
No 18
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=3.8e-38 Score=307.92 Aligned_cols=243 Identities=20% Similarity=0.255 Sum_probs=200.7
Q ss_pred hhhhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCH
Q 018147 63 PKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (360)
Q Consensus 63 ~~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~ 142 (360)
+++.++....+..+...+.+.... + +++|+++.|+|+. ..++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~i~l~~~~p~~-----------------------------~~~~ 48 (389)
T PRK08068 7 ELLKQLPKQFFASLVAKVNKKVAE----G-----HDVINLGQGNPDQ-----------------------------PTPE 48 (389)
T ss_pred hHhhhcCccHHHHHHHHHHHHHhc----C-----CCeEEecCCCCCC-----------------------------CCCH
Confidence 445555555555555554443321 1 3689999999986 3456
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHccCCCCEEEEc
Q 018147 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (360)
Q Consensus 143 ~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~ 221 (360)
.+.+++.+.+... ....|++..|.++||+++|+++.+++|.+++++ +|++|+|+++++..++..++. +||+|+++
T Consensus 49 ~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~-~gd~vlv~ 124 (389)
T PRK08068 49 HIVEALQEAAENP---ANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMN-PGDTILVP 124 (389)
T ss_pred HHHHHHHHHHhCC---CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCC-CCCEEEEc
Confidence 6777777766542 256899999999999999999998889889998 899999999999999999994 99999999
Q ss_pred CCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHH
Q 018147 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (360)
Q Consensus 222 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~ 301 (360)
+|+|+.|...++..|++++.++++++++|.+|++++++.+.+ ++++|+++|||||||.+++.+++++|+++|++
T Consensus 125 ~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~ 198 (389)
T PRK08068 125 DPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAE------KAKLMYLNYPNNPTGAVATKAFFEETVAFAKK 198 (389)
T ss_pred CCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccc------cceEEEEECCCCCCCCcCCHHHHHHHHHHHHH
Confidence 999999999999999999999998776789999999998865 68999999999999999999999999999999
Q ss_pred cCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 302 EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 302 ~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++++||+||+|.++.|++. .+.++..... ..+ ++|+++||||.|+ +|+|+||
T Consensus 199 ~~~~ii~Deay~~~~~~~~-~~~s~~~~~~-----~~~-~~i~~~S~SK~~g~~GlRiG~ 251 (389)
T PRK08068 199 HNIGVVHDFAYGAIGFDGQ-KPVSFLQTPG-----AKD-VGIELYTLSKTFNMAGWRVAF 251 (389)
T ss_pred cCeEEEEehhhhhhccCCC-CCcChhhCCC-----ccC-CEEEEecchhccCCccceeEe
Confidence 9999999999999988753 2445433211 122 5799999999995 8999999
No 19
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.6e-38 Score=307.32 Aligned_cols=239 Identities=20% Similarity=0.332 Sum_probs=201.9
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHH
Q 018147 74 GEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILD 153 (360)
Q Consensus 74 ~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~ 153 (360)
.++-+.|..+++.++..+ +| .++|++++|+|+.. .+|+.+.+++.+.+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~--~~-~~~i~l~~g~~~~~----------------------------~p~~~~~~~~~~~~~ 67 (405)
T PRK06207 19 QEVRQSAAGLEALLRGEP--LP-GRPVDFSHGDVDAH----------------------------EPTPGAFELFSAGVE 67 (405)
T ss_pred HHHHhhhhhhhhhhcCCc--CC-CCceecCCcCCCCC----------------------------CCCHHHHHHHHHHHh
Confidence 355566777777765443 23 57889999999841 346678888777775
Q ss_pred cCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHH
Q 018147 154 QIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI 232 (360)
Q Consensus 154 ~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~ 232 (360)
.. ....|++..|.++||+++++++.+.+|+.+++ ++|++|+|+++++..++..++ ++||+|++++|+|+.|...+
T Consensus 68 ~~---~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~-~~Gd~Vlv~~P~y~~~~~~~ 143 (405)
T PRK06207 68 RG---GVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATV-ARGDKVAIVQPDYFANRKLV 143 (405)
T ss_pred cC---CCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhc-CCCCEEEEeCCCchhHHHHH
Confidence 43 25679999999999999999999999988898 899999999999999999999 59999999999999999999
Q ss_pred HHcCCeEEEeecC---CCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEc
Q 018147 233 ALHGGTLVPYYLD---EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (360)
Q Consensus 233 ~~~g~~~~~v~~~---~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~D 309 (360)
+..|++++.++++ .+++|++|+++|++++++ ++++++++|||||||.+++.+++++|+++|+++|++||+|
T Consensus 144 ~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~------~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~D 217 (405)
T PRK06207 144 EFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA------GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVD 217 (405)
T ss_pred HHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh------cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 9999999999986 334689999999999876 6899999999999999999999999999999999999999
Q ss_pred cCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 310 EVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 310 eaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
|+|.+++|++. ++.++..+ . ...+ ++|+++||||+|+ +|+|+||
T Consensus 218 e~Y~~~~~~~~-~~~~~~~~-~----~~~~-~vi~i~SfSK~~~lpGlRiG~ 262 (405)
T PRK06207 218 QLYSRLLYDGT-SYTHLRAL-P----IDPE-NVITIMGPSKTESLSGYRLGV 262 (405)
T ss_pred ccccccccCCC-CCCchhcC-C----CCcC-cEEEEecchhhccCcccceEE
Confidence 99999999764 34454433 1 1123 6899999999998 8999999
No 20
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=7.3e-38 Score=309.44 Aligned_cols=240 Identities=23% Similarity=0.383 Sum_probs=201.8
Q ss_pred chhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHH
Q 018147 71 AVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQ 150 (360)
Q Consensus 71 ~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~ 150 (360)
.+++.+..++.++.+. . |..++|++++|+|+..+. ...|+++.+++.+
T Consensus 33 ~~~~~~~~~~~~~~~~----~---~~~~~i~l~~G~P~~~~~-------------------------~~~~~~~~~a~~~ 80 (430)
T PLN00145 33 SIRAVLNRVKACVDAG----G---GPRPVLPLGHGDPSAFPC-------------------------FRTAPEAEDAVAA 80 (430)
T ss_pred chhhHHHHHHHhhhcc----c---CCCCeeeCCCCCCCCCCC-------------------------CCCCHHHHHHHHH
Confidence 3555555555554422 1 025899999999985321 1347788888888
Q ss_pred HHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHH
Q 018147 151 ILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA 230 (360)
Q Consensus 151 ~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~ 230 (360)
.+... ....|++..|.+++|+++|+++.+++|.++++++|++|+|+++||.++++.++ ++||+|+++.|+|+.|..
T Consensus 81 al~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~-~~Gd~Vlv~~P~y~~y~~ 156 (430)
T PLN00145 81 ALRSG---KYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLA-QPGANILLPRPGYPLYEA 156 (430)
T ss_pred HHHcC---cCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCCccHHH
Confidence 77653 24579999999999999999999999999999999999999999999999998 599999999999999999
Q ss_pred HHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 018147 231 SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310 (360)
Q Consensus 231 ~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~De 310 (360)
.+...|++++.+++.++++|.+|++.+++.+++ ++++++++|||||||.+++.+++++|+++|+++|++||+||
T Consensus 157 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De 230 (430)
T PLN00145 157 RAVFSGLEVRHFDLLPERGWEVDLEGVEALADE------NTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADE 230 (430)
T ss_pred HHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCc------CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 999999999999987777899999999998876 79999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCc-cccccccC
Q 018147 311 VYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 311 aY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
+|.+++|++. ++.++..+.. ..++|+++||||.| .+|+|+||
T Consensus 231 ~Y~~~~~~~~-~~~~~~~~~~-------~~~vi~~~S~SK~~~~pG~RlG~ 273 (430)
T PLN00145 231 VYDHLTFGSK-PFVPMGVFGE-------VAPVLTLGSISKRWVVPGWRLGW 273 (430)
T ss_pred cchhhccCCC-Cccchhhhcc-------cCcEEEEeccccccCCCCeeEEE
Confidence 9999999764 4566544321 22689999999995 67999999
No 21
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.9e-38 Score=305.80 Aligned_cols=242 Identities=21% Similarity=0.320 Sum_probs=199.2
Q ss_pred hhhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHH
Q 018147 64 KVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSAD 143 (360)
Q Consensus 64 ~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~ 143 (360)
++.++.....+.+...+.+.++. + +++|++++|+|.. .+|..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~-----g----~~~i~l~~g~p~~-----------------------------~~p~~ 52 (394)
T PRK05942 11 RLQALPPYVFARLDELKARAREQ-----G----LDLIDLGMGNPDG-----------------------------AAPQP 52 (394)
T ss_pred hhccCCCcHHHHHHHHHHHHHhc-----C----CCeEEcCCCCCCC-----------------------------CCCHH
Confidence 34444444444444444444432 1 4689999999986 34666
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCC-EEEcCChHHHHHHHHHHHccCCCCEEEEcC
Q 018147 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPND-IFLTDGASPAVHMMMQLLIRSENDGILCPI 222 (360)
Q Consensus 144 v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~-I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~ 222 (360)
+++++.+.+... ....|++..|.++||+++|+|+.+++|+.+++++ |++|+|+++++..++.+++ ++||+|++++
T Consensus 53 ~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~-~~gd~Vlv~~ 128 (394)
T PRK05942 53 VIEAAIAALADP---QNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYV-NPGDVVLVPS 128 (394)
T ss_pred HHHHHHHHHhCC---CCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhC-CCCCEEEEcC
Confidence 777776666432 2578999999999999999999998898899985 8999999999999999998 4999999999
Q ss_pred CCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHc
Q 018147 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (360)
Q Consensus 223 P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~ 302 (360)
|+|+.+...+...|++++.++++.+++|.+|++++++.+.+ ++|+|+++|||||||.+++.+++++|+++|+++
T Consensus 129 P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~ 202 (394)
T PRK05942 129 PAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQ------QAKILYFNYPSNPTTATAPREFFEEIVAFARKY 202 (394)
T ss_pred CCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccc------cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHc
Confidence 99999999999999999999998777799999999998875 799999999999999999999999999999999
Q ss_pred CCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 303 ~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
|++||+||+|.++.|++. .+.++..+. . .++ ++|+++||||.|+ +|+|+||
T Consensus 203 ~~~iI~De~y~~~~~~~~-~~~~~~~~~-~----~~~-~~i~~~SfSK~~~~~GlRiG~ 254 (394)
T PRK05942 203 EIMLVHDLCYAELAFDGY-QPTSLLEIP-G----AKD-IGVEFHTLSKTYNMAGWRVGF 254 (394)
T ss_pred CeEEEEeccchhhccCCC-CCCChhhCC-C----ccc-cEEEEecchhccCChhhheee
Confidence 999999999999998654 344544331 1 123 5799999999995 8999999
No 22
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.1e-38 Score=305.10 Aligned_cols=216 Identities=20% Similarity=0.365 Sum_probs=188.4
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+++|++++|+|+. ..++.+++++.+.+.. ....|++..|.++||+++
T Consensus 29 ~~~i~l~~g~p~~-----------------------------~~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~i 75 (384)
T PRK06348 29 PDIIDLSLGDPDL-----------------------------ITDESIINAAFEDAKK----GHTRYTDSGGDVELIEEI 75 (384)
T ss_pred CCcEEcCCCCCCC-----------------------------CCCHHHHHHHHHHHhc----CCCCCCCCCCcHHHHHHH
Confidence 3689999999986 3356677766554433 256899999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
|+++.+++|+.+++++|++|+|+++++..++.+++ ++||+|+++.|+|+.|...++.+|++++.+++.++++|.+|+++
T Consensus 76 a~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 154 (384)
T PRK06348 76 IKYYSKNYDLSFKRNEIMATVGACHGMYLALQSIL-DPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKK 154 (384)
T ss_pred HHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhc-CCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHH
Confidence 99999999999999999999999999999999998 49999999999999999999999999999998766678999999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
|++++++ ++++|++++||||||.+++.+++++|+++|++++++||+||+|.++.|++. +.++.+.. ++
T Consensus 155 l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~--- 222 (384)
T PRK06348 155 LEALITS------KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYED--FVPMATLA-GM--- 222 (384)
T ss_pred HHHhhCc------CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCC--ccchhhcC-CC---
Confidence 9998875 789999999999999999999999999999999999999999999998653 44544432 11
Q ss_pred CCCceEEEEeccCcCcc-ccccccC
Q 018147 337 EKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++ ++|+++||||+|+ +|+|+||
T Consensus 223 -~~-~vi~~~SfSK~~~l~GlRiG~ 245 (384)
T PRK06348 223 -PE-RTITFGSFSKDFAMTGWRIGY 245 (384)
T ss_pred -cC-cEEEEecchhccCCcccccee
Confidence 23 6899999999998 8999999
No 23
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=9.4e-38 Score=304.42 Aligned_cols=242 Identities=21% Similarity=0.325 Sum_probs=199.4
Q ss_pred hhhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHH
Q 018147 64 KVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSAD 143 (360)
Q Consensus 64 ~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~ 143 (360)
++.++.++.+..+...+.++++. + ++++++++|+|+. ..|+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~l~~~~~~~-----------------------------~~~~~ 46 (383)
T TIGR03540 5 RIENLPPYLFAEIDKKKAEKKAE-----G----VDVISLGIGDPDL-----------------------------PTPKH 46 (383)
T ss_pred hhccCChhHHHHHHHHHHHHHhc-----C----CCeEEeCCCCCCC-----------------------------CCCHH
Confidence 34444444443444445444432 1 4899999999986 34677
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHccCCCCEEEEcC
Q 018147 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPI 222 (360)
Q Consensus 144 v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~ 222 (360)
+.+++.+.+... ....|++..|.++||+++|+|+.+++|++++++ +|++|+|+++++..++..++. +||+|+++.
T Consensus 47 ~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~-~gd~vlv~~ 122 (383)
T TIGR03540 47 IVEALCKAAENP---ENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVN-PGDIVLVPD 122 (383)
T ss_pred HHHHHHHHHhCC---CCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCC-CCCEEEEeC
Confidence 788877766542 256899999999999999999999889888887 699999999999999999994 999999999
Q ss_pred CCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHc
Q 018147 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (360)
Q Consensus 223 P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~ 302 (360)
|+|+.|...++..|++++.++++++++|.+|++++++++.+ ++++|+++|||||||.+++.+++++|+++|+++
T Consensus 123 P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~------~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~ 196 (383)
T TIGR03540 123 PGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAK------KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEY 196 (383)
T ss_pred CCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccc------cceEEEEeCCCCCcCccCCHHHHHHHHHHHHHc
Confidence 99999999999999999999998776788999999988865 799999999999999999999999999999999
Q ss_pred CCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 303 ~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
|++||+||+|.++.|++. .+.++..+.. . .+ ++|+++||||.|+ +|+|+||
T Consensus 197 ~~~ii~De~y~~l~~~~~-~~~~~~~~~~-~----~~-~~i~~~SfSK~~g~~GlRiG~ 248 (383)
T TIGR03540 197 NIIVCHDNAYSEITFDGY-KAPSFLEVDG-A----KD-VGIEFHSLSKTYNMTGWRIGM 248 (383)
T ss_pred CEEEEEecchhhhccCCC-CCcCcccCCC-c----cc-CEEEEEecccccCCccceeeE
Confidence 999999999999988653 3455544311 1 12 5799999999995 8999999
No 24
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-37 Score=303.66 Aligned_cols=244 Identities=23% Similarity=0.328 Sum_probs=203.3
Q ss_pred ChhhhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCC
Q 018147 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (360)
Q Consensus 62 ~~~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p 141 (360)
++++..+.....+.+...+.++++. + .++|+++.|+|+. ..|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~i~l~~~~~~~-----------------------------~~~ 46 (385)
T PRK09276 5 ADRIKNLPPYLFAEIDKKKAEKIAR-----G----VDVISLGIGDPDL-----------------------------PTP 46 (385)
T ss_pred hhHhhhCCccHHHHHHHHHHHHHhc-----C----CCEEEecCCCCCC-----------------------------CCC
Confidence 3445555666566666666555544 1 4789999999986 346
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHccCCCCEEEE
Q 018147 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILC 220 (360)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv 220 (360)
+.+.+++.+.+... ....|++..|.++||+++++|+.+++|..++++ +|++|+|+++++..+++.++. +||+|++
T Consensus 47 ~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~-~gd~Vl~ 122 (385)
T PRK09276 47 DHIIEAMCKAVEDP---ENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVN-PGDVVLV 122 (385)
T ss_pred HHHHHHHHHHHhCC---CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCC-CCCEEEE
Confidence 77777777777642 256899999999999999999999889888887 599999999999999999994 9999999
Q ss_pred cCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHH
Q 018147 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (360)
Q Consensus 221 ~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~ 300 (360)
++|+|+.|...++..|++++.++++.+++|.+|++++++.+.+ ++++|+++|||||||.+++.+++++|+++|+
T Consensus 123 ~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~ 196 (385)
T PRK09276 123 PDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAK------KAKLMFINYPNNPTGAVADLEFFEEVVDFAK 196 (385)
T ss_pred cCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccc------cceEEEEeCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999998766788999999888765 7899999999999999999999999999999
Q ss_pred HcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 301 ~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++|++||+||+|.++.|++. .+.++..... . .+ ++|+++||||.|+ +|+|+||
T Consensus 197 ~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~-~----~~-~~i~~~S~SK~~g~~GlRiG~ 250 (385)
T PRK09276 197 KYDIIVCHDAAYSEIAYDGY-KPPSFLEVPG-A----KD-VGIEFHSLSKTYNMTGWRIGF 250 (385)
T ss_pred HCCcEEEEecchhheecCCC-CCCChhccCC-C----cC-CEEEEecchhhcCCcchhhee
Confidence 99999999999999988754 3455544311 1 12 5799999999995 8999999
No 25
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-37 Score=287.58 Aligned_cols=221 Identities=26% Similarity=0.394 Sum_probs=202.2
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+++|.+++|+|...+- ....+.+.+++.+.++.. ...+|+|+.|+...|+++
T Consensus 61 k~iipl~~GDPsv~~~-------------------------~~ts~~a~~Av~~al~Sg---k~N~Yaps~G~~~AR~AV 112 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPC-------------------------FRTSQEAEQAVVDALRSG---KGNGYAPSVGILPARRAV 112 (447)
T ss_pred ceeccCCCCCCCcccc-------------------------ccCCHHHHHHHHHHHhcC---CCCCcCCccccHHHHHHH
Confidence 3899999999997432 134677888888888875 377999999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
|+|+++.....+++++|++|+|.++||..++.+|.+ ||..|++|.|+|+.|...+...|.+++.|.+-++.+|.+|++.
T Consensus 113 AeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~-p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~ 191 (447)
T KOG0259|consen 113 AEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLAN-PGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDG 191 (447)
T ss_pred HHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcC-CCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHH
Confidence 999988887789999999999999999999999994 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
++..+++ +|.+++++||+||+|.+++.+.+++|+++|++++++||.||+|.+++|++. +|.++.++..
T Consensus 192 veal~DE------NT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~-pfvpmg~fss----- 259 (447)
T KOG0259|consen 192 VEALADE------NTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDK-PFVPMGKFSS----- 259 (447)
T ss_pred HHHhhcc------CeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCC-Cccchhhccc-----
Confidence 9999988 899999999999999999999999999999999999999999999999986 6888877743
Q ss_pred CCCceEEEEeccCcCc-cccccccC
Q 018147 337 EKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
.+.+|.++|+||.| -+|+|+||
T Consensus 260 --iVPVitlggisKrW~VPGWRlGW 282 (447)
T KOG0259|consen 260 --IVPVITLGGISKRWIVPGWRLGW 282 (447)
T ss_pred --cCceEeecccccccccCCceeee
Confidence 45799999999986 68999999
No 26
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=2.9e-37 Score=303.12 Aligned_cols=244 Identities=32% Similarity=0.576 Sum_probs=205.9
Q ss_pred ChhhhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCC
Q 018147 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (360)
Q Consensus 62 ~~~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p 141 (360)
|+++..+++..+..+..++++++.. + .++|++++|+|...+. ..|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~i~l~~g~p~~~~~--------------------------~~~ 51 (404)
T PRK09265 7 SSKLENVCYDIRGPVLKEAKRLEEE-----G----HKILKLNIGNPAPFGF--------------------------EAP 51 (404)
T ss_pred hHHHHhcCcchhHHHHHHHHHHHHc-----C----CCeEEecCCCCCcCCC--------------------------CCC
Confidence 4566778888888788887776443 1 4899999999974222 246
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEc
Q 018147 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (360)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~ 221 (360)
+.+++++.+.+.. ...|++..|.++||+++|+++.++++.++++++|++|+|+++++..++++++ ++||+|+++
T Consensus 52 ~~i~~~~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~Vlv~ 125 (404)
T PRK09265 52 DEILRDVIRNLPT-----AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALL-NNGDEVLVP 125 (404)
T ss_pred HHHHHHHHHHhhc-----CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhC-CCCCEEEEe
Confidence 7787777765542 4579999999999999999998765557899999999999999999999998 499999999
Q ss_pred CCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHH
Q 018147 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (360)
Q Consensus 222 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~ 301 (360)
+|+|+.|...++..|++++.++++.+++|.+|++++++++.+ ++++|+++|||||||.+++.+++++|+++|++
T Consensus 126 ~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~ 199 (404)
T PRK09265 126 APDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITP------RTKAIVIINPNNPTGAVYSKELLEEIVEIARQ 199 (404)
T ss_pred CCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccc------cceEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence 999999999999999999999887666788999999998865 78999999999999999999999999999999
Q ss_pred cCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCc-cccccccC
Q 018147 302 EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 302 ~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
+|++||+||+|.++.|++. ++.++.... ++.++|+++||||.| .+|+|+||
T Consensus 200 ~~~~ii~De~y~~~~~~~~-~~~~~~~~~-------~~~~vi~~~S~SK~~~~pGlRiG~ 251 (404)
T PRK09265 200 HNLIIFADEIYDKILYDGA-VHISIASLA-------PDLLCVTFNGLSKAYRVAGFRVGW 251 (404)
T ss_pred CCCEEEEehhhhhccCCCC-CcCCHHHcC-------CCceEEEEecchhhccCcccceEE
Confidence 9999999999999998764 355655432 233689999999999 68999998
No 27
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-37 Score=302.86 Aligned_cols=217 Identities=23% Similarity=0.361 Sum_probs=187.9
Q ss_pred cccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHH
Q 018147 96 FDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDT 175 (360)
Q Consensus 96 ~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ 175 (360)
..++|+|++|+|.. ..++.+++++.+.+... ....|++ .|.++||++
T Consensus 43 ~~~~i~L~~g~p~~-----------------------------~~~~~~~~~l~~~~~~~---~~~~Y~~-~G~~~lr~a 89 (410)
T PRK06290 43 DMELIDMGVGEPDE-----------------------------MADESVVEVLCEEAKKP---ENRGYAD-NGIQEFKEA 89 (410)
T ss_pred CCCeEEcCCCCCCC-----------------------------CCCHHHHHHHHHHHhCC---CCCCCCC-CCcHHHHHH
Confidence 35799999999987 34667777776655432 2456875 899999999
Q ss_pred HHHHHHhhcCCC-CCCC-CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCC
Q 018147 176 IAAGIEARDGFP-ADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLE 253 (360)
Q Consensus 176 ia~~l~~~~g~~-~~~~-~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d 253 (360)
+|+++.+++|+. ++++ +|++|+|++++|..++++++. +||.|+++.|+|+.|...++..|++++.++++++++|.+|
T Consensus 90 ia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~~-~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d 168 (410)
T PRK06290 90 AARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFIN-PGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPD 168 (410)
T ss_pred HHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhCC-CCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCC
Confidence 999999988987 9997 799999999999999999994 9999999999999999999999999999999987788999
Q ss_pred HHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhh
Q 018147 254 TSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSM 333 (360)
Q Consensus 254 ~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~ 333 (360)
++++++++.+ ++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++. +.++.....
T Consensus 169 ~~~l~~~~~~------~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~--~~s~~~~~~-- 238 (410)
T PRK06290 169 LDSIPKDIKE------KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK--PLSFLSVPG-- 238 (410)
T ss_pred HHHHHHhhcc------cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC--CcChhcCCC--
Confidence 9999988865 789999999999999999999999999999999999999999999988653 445544311
Q ss_pred CCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 334 GYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 334 ~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
..+ ++|+++||||.|+ +|+|+||
T Consensus 239 ---~~~-~~I~i~SfSK~~g~~GlRiG~ 262 (410)
T PRK06290 239 ---AKE-VGVEIHSLSKAYNMTGWRLAF 262 (410)
T ss_pred ---ccc-cEEEEeechhhcCCchhheEe
Confidence 123 5799999999995 8999998
No 28
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=3.8e-37 Score=302.74 Aligned_cols=221 Identities=22% Similarity=0.379 Sum_probs=191.8
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+++|+|++|+|+.... ..+|+.+++++.+.+... ....|++..|.+++|+++
T Consensus 31 ~~~i~l~~G~p~~~~~-------------------------~~~~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~~i 82 (409)
T PLN02656 31 KRVISLGMGDPTAYSC-------------------------FHTTHVAQEAVVDALQSN---KFNGYAPTVGLPQARRAI 82 (409)
T ss_pred CeeeecCCCCCCcCCC-------------------------CCCCHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHH
Confidence 5899999999984110 134777888888777653 256899999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
++++.+.+|+.+++++|++|+|+++++..++.+++ ++||+|++++|+|+.|...++..|++++.++++++++|.+|+++
T Consensus 83 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~ 161 (409)
T PLN02656 83 AEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLA-RPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDA 161 (409)
T ss_pred HHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHh-CCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHH
Confidence 99999989999999999999999999999999998 59999999999999999999999999999999766678999999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
+++++++ ++++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++. .+.++..+.
T Consensus 162 l~~~~~~------~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~------ 228 (409)
T PLN02656 162 VEALADQ------NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSN-PFVPMGVFG------ 228 (409)
T ss_pred HHHHhcc------CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC-CcccHHHhc------
Confidence 9988866 789999999999999999999999999999999999999999999999764 355554431
Q ss_pred CCCceEEEEeccCcC-ccccccccC
Q 018147 337 EKDISLVSFQSVSKG-RYFHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~-~~g~~RvGw 360 (360)
...++|+++||||. ..+|+|+||
T Consensus 229 -~~~~vi~~~SfSK~f~~pGlRiG~ 252 (409)
T PLN02656 229 -SIVPVLTLGSLSKRWIVPGWRLGW 252 (409)
T ss_pred -ccCcEEEEcccchhccCcceeEEE
Confidence 11268999999998 567999998
No 29
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=3.2e-37 Score=303.32 Aligned_cols=245 Identities=24% Similarity=0.344 Sum_probs=199.1
Q ss_pred cccChhhhcccc-chhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccC
Q 018147 59 DSLNPKVLKCEY-AVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQ 137 (360)
Q Consensus 59 ~~~~~~~~~~~~-~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~ 137 (360)
..||.++.++.. ..+.++..++.+.+++- +.++++++++|+|+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~l~~~~~~~---------------------------- 46 (409)
T PRK07590 2 AKINENYLKLKAGYLFPEIARRVNAFREAN-------PEAKIIRLGIGDVTQ---------------------------- 46 (409)
T ss_pred cccccccCccCCcchHHHHHHHHHHHhhhc-------CCCceEEecCcCCCC----------------------------
Confidence 456777776654 45666777777776541 225799999999997
Q ss_pred CCCCHHHHHHHHHHHHcCCC-CCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCC
Q 018147 138 GLFSADSIERAWQILDQIPG-RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (360)
Q Consensus 138 ~~~p~~v~~~~~~~l~~~~~-~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd 216 (360)
.+|+.+.+++.+.+.+... .....|++..|.++||+++|+++.+.+|+++++++|++|+|+++++..++ .++ ++||
T Consensus 47 -~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l~-~~~-~~gd 123 (409)
T PRK07590 47 -PLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNIL-DIF-GPDN 123 (409)
T ss_pred -CCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHHH-Hhc-CCCC
Confidence 4577788888877765321 13578999999999999999999988999999999999999999999875 455 4999
Q ss_pred EEEEcCCCchHHHHHHHHcCCe-----------EEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCccc
Q 018147 217 GILCPIPQYPLYSASIALHGGT-----------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (360)
Q Consensus 217 ~Vlv~~P~y~~~~~~~~~~g~~-----------~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~ 285 (360)
+|++++|+|+.|...++..|.+ ++.++++++++|.+|.++ + ++|+|+++|||||||.
T Consensus 124 ~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------~------~~k~i~l~nP~NPTG~ 191 (409)
T PRK07590 124 TIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE------E------KVDIIYLCFPNNPTGT 191 (409)
T ss_pred EEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc------c------CceEEEEeCCCCCcCC
Confidence 9999999999999999999987 899999866667666432 2 7999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 286 ~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
+++.+++++|+++|+++|++||+||+|.++.+++. .+.++..+ +. ..+ ++|+++||||.|+ +|+|+||
T Consensus 192 ~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~-~~~~~~~~-~~----~~~-~vi~~~SfSK~~~~pGlRiG~ 260 (409)
T PRK07590 192 VLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPS-LPHSIYEI-EG----ARE-CAIEFRSFSKTAGFTGTRCAY 260 (409)
T ss_pred cCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCC-CCcchhhC-CC----ccc-ceEEEecCccccCCcCceeEE
Confidence 99999999999999999999999999999988653 23444433 11 123 6899999999996 9999998
No 30
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=8.4e-37 Score=298.28 Aligned_cols=238 Identities=27% Similarity=0.360 Sum_probs=201.4
Q ss_pred hhhhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCH
Q 018147 63 PKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSA 142 (360)
Q Consensus 63 ~~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~ 142 (360)
+++.+.+...+.++...+.++++. . ++++++++|+|+. ..|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~i~l~~~~~~~-----------------------------~~~~ 46 (388)
T PRK07337 5 ARVDAIEPFYVMELAKEAQALERA----G-----RDIIHMGIGEPDF-----------------------------TAPE 46 (388)
T ss_pred hHhHhcCchHHHHHHHHHHHHHhc----C-----CCEEEeCCcCCCC-----------------------------CCCH
Confidence 445555555555566666555432 1 4799999999986 3467
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcC
Q 018147 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222 (360)
Q Consensus 143 ~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~ 222 (360)
.+.+++.+.+.+ ....|++..|.++||+++|+|+.+++|+.+++++|++|+|+++|+..++..++ ++||+|++++
T Consensus 47 ~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vlv~~ 121 (388)
T PRK07337 47 PVVEAAARALRR----GVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALV-ERGDEVLMPD 121 (388)
T ss_pred HHHHHHHHHHhc----CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhc-CCCCEEEEeC
Confidence 778877777654 25679999999999999999999999999999999999999999999999998 4999999999
Q ss_pred CCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHc
Q 018147 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (360)
Q Consensus 223 P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~ 302 (360)
|+|+.+...++..|++++.++++++++|.+|++++++.+++ ++++|++++||||||.+++.+++++|+++|+++
T Consensus 122 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~ 195 (388)
T PRK07337 122 PSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGE------RTRGVLLASPSNPTGTSIAPDELRRIVEAVRAR 195 (388)
T ss_pred CCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCc------cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHC
Confidence 99999999999999999999998777899999999998876 789999999999999999999999999999999
Q ss_pred CCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 303 GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 303 ~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++++|+||+|.++.|++. +.++... .+ ++|+++||||.|+ +|+|+||
T Consensus 196 ~~~ii~De~y~~~~~~~~--~~~~~~~--------~~-~vi~~~S~SK~~~~~G~RiG~ 243 (388)
T PRK07337 196 GGFTIVDEIYQGLSYDAA--PVSALSL--------GD-DVITINSFSKYFNMTGWRLGW 243 (388)
T ss_pred CCEEEEeccccccccCCC--CcChhhc--------cC-CEEEEEechhhcCCchhheee
Confidence 999999999999888653 3343321 12 5899999999995 8999999
No 31
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=1.1e-36 Score=298.99 Aligned_cols=241 Identities=24% Similarity=0.329 Sum_probs=193.5
Q ss_pred hhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHH
Q 018147 65 VLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADS 144 (360)
Q Consensus 65 ~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v 144 (360)
+.+++..+...+...+.++++. + +++|+++.|+|+. ..|+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~----~-----~~~i~l~~~~p~~-----------------------------~~~~~~ 48 (405)
T PRK09148 7 IRRLPPYVFEQVNRLKAAARAA----G-----ADIIDLGMGNPDL-----------------------------PTPQHI 48 (405)
T ss_pred hhcCCccHHHHHHHHHHHHHhc----C-----CCeEEcCCCCCCC-----------------------------CCCHHH
Confidence 3444555555554454444443 1 4789999999986 447778
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHccCCCCEEEEcCC
Q 018147 145 IERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIP 223 (360)
Q Consensus 145 ~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P 223 (360)
++++.+.+... ....|++..|.++||+++|+++.+++|+.++++ +|++|+|++++|..++..++ ++||+|++++|
T Consensus 49 ~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vl~~~P 124 (405)
T PRK09148 49 VDKLCETAQDP---RTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAIT-APGDVILCPNP 124 (405)
T ss_pred HHHHHHHHcCc---ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhc-CCCCEEEEcCC
Confidence 88877665432 357899999999999999999998889889998 89999999999999999999 49999999999
Q ss_pred CchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcC
Q 018147 224 QYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (360)
Q Consensus 224 ~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~ 303 (360)
+|+.|...++..|++++.++++.++.|..+++++.+...+ +++++++++||||||.+++.+++++|+++|+++|
T Consensus 125 ~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~------~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~ 198 (405)
T PRK09148 125 SYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIP------KPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHD 198 (405)
T ss_pred CCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccc------cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999998765554444443332222 6889999999999999999999999999999999
Q ss_pred CEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 304 LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 304 i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++||+||+|.++.|++. ++.++... + ..++ ++|+++||||.|+ +|+|+||
T Consensus 199 ~~ii~De~Y~~~~~~~~-~~~s~~~~-~----~~~~-~~i~~~SfSK~~~~pGlR~G~ 249 (405)
T PRK09148 199 IIILSDLAYSEIYFDGN-PPPSVLQV-P----GAKD-VTVEFTSMSKTFSMAGWRMGF 249 (405)
T ss_pred eEEEEeccchhhhcCCC-CCCChhhC-C----CccC-cEEEEeccccccCCcchheee
Confidence 99999999999988763 35555443 1 1134 5789999999998 8999999
No 32
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-36 Score=295.89 Aligned_cols=215 Identities=22% Similarity=0.364 Sum_probs=187.7
Q ss_pred cceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHH
Q 018147 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (360)
Q Consensus 98 ~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia 177 (360)
++|++++|+|+. ..|+.+++.+.+.+.+ ....|++..|.++||++++
T Consensus 27 ~~i~l~~g~p~~-----------------------------~~p~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~ia 73 (387)
T PRK08912 27 GAINLGQGFPDD-----------------------------PGPEDVRRAAADALLD----GSNQYPPMMGLPELRQAVA 73 (387)
T ss_pred CeEEccCCCCCC-----------------------------CCCHHHHHHHHHHHhc----CCCCCCCCCCcHHHHHHHH
Confidence 789999999986 3467788777766554 2567999999999999999
Q ss_pred HHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 178 AGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 178 ~~l~~~~g~~~~~~-~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
+++.+.+|+.++++ +|++|+|+++++..++..++. +||+|+++.|+|+.|...++.+|++++.++++++ +|++|+++
T Consensus 74 ~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~-~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~ 151 (387)
T PRK08912 74 AHYARFQGLDLDPETEVMVTSGATEALAAALLALVE-PGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPP-HWRLPRAA 151 (387)
T ss_pred HHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcC-CCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcc-cCcCCHHH
Confidence 99998889999998 999999999999999999984 9999999999999999999999999999998643 57999999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
+++.+.+ ++++++++|||||||.+++.+++++|+++|++++++||+||+|.++.|++. .+.++... .++
T Consensus 152 l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~-~~~--- 220 (387)
T PRK08912 152 LAAAFSP------RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGR-RHIPLMTL-PGM--- 220 (387)
T ss_pred HHHHhCc------cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCC-CCcChhhC-CCc---
Confidence 9998865 789999999999999999999999999999999999999999999998763 35555433 111
Q ss_pred CCCceEEEEeccCcCcc-ccccccC
Q 018147 337 EKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.+ ++|+++||||.|+ +|+|+||
T Consensus 221 -~~-~~i~~~S~SK~~g~~GlRiG~ 243 (387)
T PRK08912 221 -RE-RTVKIGSAGKIFSLTGWKVGF 243 (387)
T ss_pred -cC-ceEEEeechhhccCcCceeEE
Confidence 23 6899999999998 8999998
No 33
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=5.7e-37 Score=300.31 Aligned_cols=207 Identities=19% Similarity=0.156 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCE--EEcCChHHHHHHHHHHHcc-CCCCEE
Q 018147 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDI--FLTDGASPAVHMMMQLLIR-SENDGI 218 (360)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I--~~t~Ga~~al~~~~~~l~~-~~gd~V 218 (360)
+.+.+++.+.+++. ....|++..|.++||+++++|+.+.++..+++++| ++|+|+++|+.++++.+.. ++||+|
T Consensus 47 ~~l~~a~~~~~~~~---~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~V 123 (396)
T PRK09257 47 RAVKKAEARLLETE---TTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKV 123 (396)
T ss_pred HHHHHHHHHhcccc---cCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeE
Confidence 45555555544332 25679999999999999999998776666789987 9999999999999876631 599999
Q ss_pred EEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHH
Q 018147 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (360)
Q Consensus 219 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~l 298 (360)
++++|+|+.|...++..|++++.+++.++++|++|++.++++++.. ..+.+++++++||||||.+++.+++++|+++
T Consensus 124 lv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~---~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~ 200 (396)
T PRK09257 124 WVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQA---PAGDVVLLHGCCHNPTGADLTPEQWDELAEL 200 (396)
T ss_pred EECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999854445899999999988642 1134556668999999999999999999999
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc-cccccC
Q 018147 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFSKW 360 (360)
Q Consensus 299 a~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~RvGw 360 (360)
|++|+++||+||+|.++.|+...++.++..+.. . .+ ++|+++||||.|+. |+|+||
T Consensus 201 a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~-~----~~-~vi~i~SfSK~~~~~GlRiG~ 257 (396)
T PRK09257 201 LKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAA-A----GL-ELLVASSFSKNFGLYGERVGA 257 (396)
T ss_pred HHhCCcEEEEeccccccccchHHHHHHHHHHHh-c----CC-cEEEEEEcCCcCcccccccee
Confidence 999999999999999988752222344443321 1 12 58999999999995 999999
No 34
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-36 Score=295.69 Aligned_cols=218 Identities=22% Similarity=0.357 Sum_probs=191.2
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+++|++++|.|.. ..++.+.+.+.+.+.. ....|++..|.++||+++
T Consensus 33 ~~~i~l~~g~p~~-----------------------------~~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~i 79 (402)
T PRK06107 33 RSIVDLTVGEPDF-----------------------------DTPDHIKQAAVAAIER----GETKYTLVNGTPALRKAI 79 (402)
T ss_pred CCEEEcCCCCCCC-----------------------------CCCHHHHHHHHHHHHc----CCCCCCCCCCCHHHHHHH
Confidence 4799999999986 3467777777777764 256799999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
++++.+++|..+++++|++|+|+++|+..++..++ ++||+|++++|+|..|...+...++.++.++++.+++|.+|+++
T Consensus 80 a~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~-~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 158 (402)
T PRK06107 80 IAKLERRNGLHYADNEITVGGGAKQAIFLALMATL-EAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEA 158 (402)
T ss_pred HHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhc-CCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHH
Confidence 99999988998999999999999999999999888 49999999999999999999999999999988766678899999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHc-CCEEEEccCCCCCccCCCCCCCCHHHHHHhhCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE-GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~-~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~ 335 (360)
+++++++ ++++|++++|+||||.+++.+++++|+++|+++ ++++|+||+|.++.|++. ++.++.+..+++
T Consensus 159 l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~-~~~~~~~~~~~~-- 229 (402)
T PRK06107 159 LEAAITP------RTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDE-PTPHLLAAAPEL-- 229 (402)
T ss_pred HHhhcCc------CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCC-CCCCHHHhCcCc--
Confidence 9998865 789999999999999999999999999999998 999999999999988764 466666553322
Q ss_pred CCCCceEEEEeccCcCcc-ccccccC
Q 018147 336 GEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 336 ~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.+ ++|+++||||.|+ +|+|+||
T Consensus 230 --~~-~vi~~~S~SK~~~~pGlRiG~ 252 (402)
T PRK06107 230 --RD-RVLVTNGVSKTYAMTGWRIGY 252 (402)
T ss_pred --cC-CEEEEeccchhhcCcccceee
Confidence 22 6899999999997 8999999
No 35
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.4e-37 Score=299.87 Aligned_cols=192 Identities=16% Similarity=0.147 Sum_probs=161.6
Q ss_pred CCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEE--EcCChHHHHHHHHH---HHccCCCCEEEEcCCCchHHHHHHH
Q 018147 159 ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIF--LTDGASPAVHMMMQ---LLIRSENDGILCPIPQYPLYSASIA 233 (360)
Q Consensus 159 ~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~--~t~Ga~~al~~~~~---~l~~~~gd~Vlv~~P~y~~~~~~~~ 233 (360)
...+|++..|.++||+++|+|+.+..+..+++++|+ .|.|+++++..++. .++ ++||+|++++|+|+.|...++
T Consensus 64 ~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~-~~Gd~Vlv~~P~y~~~~~~~~ 142 (404)
T PTZ00376 64 LDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFL-PAGTTVYVSNPTWPNHVNIFK 142 (404)
T ss_pred CCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhc-CCCCEEEEcCCCchhHHHHHH
Confidence 357899999999999999999977766678999998 59999999988875 566 599999999999999999999
Q ss_pred HcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCC
Q 018147 234 LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ 313 (360)
Q Consensus 234 ~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~ 313 (360)
.+|++++.+++.++++|++|++.++++++.. .++.++++++|||||||.+++.+++++|+++|++|+++||+||+|.
T Consensus 143 ~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~---~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~ 219 (404)
T PTZ00376 143 SAGLNVKEYRYYDPKTKGLDFDGMLEDLRTA---PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQ 219 (404)
T ss_pred HcCCceeeccccCcccCCcCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhc
Confidence 9999999999965556899999999998642 1135677778999999999999999999999999999999999999
Q ss_pred CCccCCC-CCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 314 ENVYVPE-KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 314 ~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++.|++. .++.++..+.. . .+ ++|+++||||.|+ +|+|+||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~-~----~~-~vi~i~SfSK~~~~~GlRvG~ 262 (404)
T PTZ00376 220 GFASGDLDKDAYAIRLFAE-R----GV-EFLVAQSFSKNMGLYGERIGA 262 (404)
T ss_pred CccCCCHHHHHHHHHHHHh-c----CC-cEEEEEeCCCcccccccccce
Confidence 9998641 11223333221 1 22 5899999999999 8999999
No 36
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=5.4e-36 Score=291.26 Aligned_cols=217 Identities=21% Similarity=0.234 Sum_probs=180.0
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
.++|++++|+|.+ ..|+.+.+++.+... ....|++..|.++||+++
T Consensus 24 ~~~i~l~~~~p~~-----------------------------~~~~~~~~a~~~~~~-----~~~~Y~~~~G~~~lr~ai 69 (374)
T PRK05839 24 YKGLDLTIGEPQF-----------------------------ETPKFIQDALKNNAH-----LLNKYPKSAGEESLREAQ 69 (374)
T ss_pred CCeEEcCCCCCCC-----------------------------CCCHHHHHHHHHHhh-----ccCCCCCCCCCHHHHHHH
Confidence 4899999999986 346666666655443 256799999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 255 (360)
|+++++++|+.+++++|++|+|+++++..++..++. .+||.|+++.|+|+.|...++..|++++.++++++++|.+|++
T Consensus 70 a~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~ 149 (374)
T PRK05839 70 RGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLN 149 (374)
T ss_pred HHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcc
Confidence 999999999999999999999999999999888752 3799999999999999999999999999999987777888866
Q ss_pred HHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhC-
Q 018147 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG- 334 (360)
Q Consensus 256 ~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~- 334 (360)
+.+ + + ++|+|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.+++ ++.++........
T Consensus 150 ~~~--~-~------~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~--~~~s~~~~~~~~~~ 218 (374)
T PRK05839 150 EKE--L-Q------EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT--PPPSLLEASILVGN 218 (374)
T ss_pred hhh--h-c------cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC--CCCCHhhhhcccCc
Confidence 542 2 2 68999999999999999999999999999999999999999999976543 3555544321100
Q ss_pred CCCCCceEEEEeccCcCc-cccccccC
Q 018147 335 YGEKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 335 ~~~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
..+ + ++|+++||||.| .+|+|+||
T Consensus 219 ~~~-~-~vi~~~SfSK~~~~~GlRiG~ 243 (374)
T PRK05839 219 ESF-K-NVLVINSISKRSSAPGLRSGF 243 (374)
T ss_pred ccc-C-cEEEEeccccccCCccceeEE
Confidence 112 2 689999999997 57999999
No 37
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=3.3e-36 Score=296.43 Aligned_cols=221 Identities=22% Similarity=0.388 Sum_probs=188.9
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
.++|++++|+|+... + ..+|+.+.+++.+.+... ....|++..|.++||+++
T Consensus 33 ~~~i~l~~g~p~~~~-----------------~--------~~p~~~~~~a~~~~~~~~---~~~~Y~~~~G~~~Lr~ai 84 (412)
T PTZ00433 33 KSIIKLSVGDPTLDG-----------------N--------LLTPAIQTKALVEAVDSQ---ECNGYPPTVGSPEAREAV 84 (412)
T ss_pred CCeeecCCcCCCCcC-----------------C--------CCCCHHHHHHHHHHhhcC---CCCCCCCCCCcHHHHHHH
Confidence 489999999998410 0 023666777777666642 357899999999999999
Q ss_pred HHHHHhhc------CCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCc
Q 018147 177 AAGIEARD------GFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGW 250 (360)
Q Consensus 177 a~~l~~~~------g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 250 (360)
|+++.+++ |..+++++|++|+|+++++..++.+++ ++||+|+++.|+|+.|...++..|++++.++++++++|
T Consensus 85 a~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~ 163 (412)
T PTZ00433 85 ATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALC-DEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDW 163 (412)
T ss_pred HHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhc-CCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccC
Confidence 99998765 467899999999999999999999998 49999999999999999999999999999999877789
Q ss_pred CCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHH
Q 018147 251 GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVS 330 (360)
Q Consensus 251 ~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~ 330 (360)
++|+++|++++++ ++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.+++|++. .+.++..+.
T Consensus 164 ~~d~~~l~~~~~~------~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~ 236 (412)
T PTZ00433 164 EADLDEIRRLVDD------RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGA-TFTSVADFD 236 (412)
T ss_pred cCCHHHHHHHhcc------CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCC-Cccchhhcc
Confidence 9999999988876 789999999999999999999999999999999999999999999998764 345554442
Q ss_pred HhhCCCCCCceEEEEeccCcCc-cccccccC
Q 018147 331 RSMGYGEKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 331 ~~~~~~~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
. +.++|+++||||.| .+|+|+||
T Consensus 237 ~-------~~~~i~~~SfSK~~~~pGlRlG~ 260 (412)
T PTZ00433 237 T-------TVPRVILGGTAKNLVVPGWRLGW 260 (412)
T ss_pred C-------CCceEEEccchhhcCCCCeeEEE
Confidence 1 22579999999999 68999999
No 38
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=6.8e-36 Score=291.54 Aligned_cols=216 Identities=21% Similarity=0.360 Sum_probs=186.4
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+++|+++.|+|.. .+++.+.+++.+.+.. ....|++..|.++||+++
T Consensus 29 ~~~i~l~~g~p~~-----------------------------~~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~i 75 (384)
T PRK12414 29 HDALNLSQGAPNF-----------------------------APDPALVEGVARAMRD----GHNQYAPMAGIAALREAL 75 (384)
T ss_pred CCeEEcCCCCCCC-----------------------------CCCHHHHHHHHHHHHh----CCCCcCCCCCcHHHHHHH
Confidence 3789999999986 3467777777766654 246799999999999999
Q ss_pred HHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHH
Q 018147 177 AAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (360)
Q Consensus 177 a~~l~~~~g~~~~~-~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 255 (360)
++++++++|..+++ ++|++|+|+++++..++++++ ++||+|+++.|+|..|...++.+|++++.++++++ +|.+|++
T Consensus 76 a~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~ 153 (384)
T PRK12414 76 AEKTERLYGARYDPASEVTVIASASEGLYAAISALV-HPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPE-DFRVNWD 153 (384)
T ss_pred HHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhc-CCCCEEEEeCCCccchHHHHHHcCCEEEEEecCcc-ccccCHH
Confidence 99999988987776 689999999999999999998 59999999999999999999999999999998754 4789999
Q ss_pred HHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCC
Q 018147 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (360)
Q Consensus 256 ~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~ 335 (360)
.|++++++ ++++|+++|||||||.+++.+++++|+++|+++|+++|+||+|.++.|++. ++.++.+. +.+
T Consensus 154 ~l~~~l~~------~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~-~~~~~~~~-~~~-- 223 (384)
T PRK12414 154 EVAAAITP------RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGA-RHHSMARH-REL-- 223 (384)
T ss_pred HHHhhcCc------ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCC-CccCcccC-cCc--
Confidence 99998865 799999999999999999999999999999999999999999999999764 34444332 111
Q ss_pred CCCCceEEEEeccCcCcc-ccccccC
Q 018147 336 GEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 336 ~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.+ ++|+++||||.|+ +|+|+||
T Consensus 224 --~~-~~i~~~SfSK~~~~pGlRiG~ 246 (384)
T PRK12414 224 --AE-RSVIVSSFGKSYHVTGWRVGY 246 (384)
T ss_pred --cC-cEEEEecccccccCccceEEE
Confidence 22 6899999999996 8999999
No 39
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=3.3e-36 Score=300.39 Aligned_cols=198 Identities=23% Similarity=0.390 Sum_probs=172.9
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCC--CCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHH-HcC
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFP--ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA-LHG 236 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~--~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~-~~g 236 (360)
...|++..|.++||+++|+|+.+++|.. +++++|++|+|+++++..++.+++ ++||.|++++|+|+.|...+. ..|
T Consensus 79 l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~-~pGd~Vlv~~P~Y~~~~~~~~~~~g 157 (468)
T PLN02450 79 LALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLA-EPGDAFLLPTPYYPGFDRDLKWRTG 157 (468)
T ss_pred hhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhC-CCCCEEEECCCCCCchHHHHhhcCC
Confidence 4569999999999999999999887744 789999999999999999999999 599999999999999988888 589
Q ss_pred CeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 018147 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (360)
Q Consensus 237 ~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~ 316 (360)
++++.++++++++|.+|+++++++++++.+++.++|+|+++|||||||.+++.+++++|+++|++++++||+||+|.++.
T Consensus 158 ~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~ 237 (468)
T PLN02450 158 VEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTV 237 (468)
T ss_pred cEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccc
Confidence 99999999877789999999999998766666789999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHhh---CCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 317 YVPEKKFHSFKKVSRSM---GYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 317 ~~~~~~~~s~~~~~~~~---~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
|++. ++.++.+..... +....+ ++++++||||.|+ +|+|+||
T Consensus 238 f~~~-~~~s~l~~~~~~~~~~~~~~~-~vi~l~S~SK~~~l~GlRiG~ 283 (468)
T PLN02450 238 FDSP-GFVSVMEVLKDRKLENTDVSN-RVHIVYSLSKDLGLPGFRVGA 283 (468)
T ss_pred cCCC-CcccHHHHhhhcccccCCCCC-cEEEEEeccccCCCCCccEEE
Confidence 9764 466766553211 000123 6999999999997 9999998
No 40
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=8.2e-36 Score=290.26 Aligned_cols=215 Identities=26% Similarity=0.454 Sum_probs=187.0
Q ss_pred cceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHH
Q 018147 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (360)
Q Consensus 98 ~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia 177 (360)
++|+++.|+|+. ..++.+.+++.+.+.+ ....|++..|.+++|+++|
T Consensus 21 ~~i~l~~~~~~~-----------------------------~~~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia 67 (378)
T PRK07682 21 GVISLGVGEPDF-----------------------------VTPWNVREASIRSLEQ----GYTSYTANAGLLELRQEIA 67 (378)
T ss_pred CeEEeCCCCCCC-----------------------------CCCHHHHHHHHHHHhc----CCCCCCCCCCcHHHHHHHH
Confidence 689999999986 3355566776666553 2567999999999999999
Q ss_pred HHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 178 AGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 178 ~~l~~~~g~~~~~~-~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
+++.+++|+.++++ +|++|+|+++|+.+++..++. +||+|++++|+|+.|...++..|++++.++++.+++|++|+++
T Consensus 68 ~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~-~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 146 (378)
T PRK07682 68 KYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIIN-PGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQ 146 (378)
T ss_pred HHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCC-CCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHH
Confidence 99999989888886 799999999999999999984 9999999999999999999999999999998766678999999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
|++++.+ +++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++. +.++.... ++
T Consensus 147 l~~~~~~------~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~--- 214 (378)
T PRK07682 147 IEAAITA------KTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEA--YTSFASIK-GM--- 214 (378)
T ss_pred HHhhcCc------ccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCC--CCChhhcc-cc---
Confidence 9998876 789999999999999999999999999999999999999999999998753 44554432 11
Q ss_pred CCCceEEEEeccCcCcc-ccccccC
Q 018147 337 EKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.+ ++|+++||||.|+ +|+|+||
T Consensus 215 -~~-~~i~~~S~SK~~~~~GlR~G~ 237 (378)
T PRK07682 215 -RE-RTILISGFSKGFAMTGWRLGF 237 (378)
T ss_pred -cC-CEEEEecCcccccChhhhhhh
Confidence 22 6899999999998 8999999
No 41
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=1e-35 Score=286.72 Aligned_cols=211 Identities=23% Similarity=0.416 Sum_probs=184.5
Q ss_pred ceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHH
Q 018147 99 ILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA 178 (360)
Q Consensus 99 vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~ 178 (360)
++++++|+|.. ..++.+.+++.+.... ...|++..|.++||+++++
T Consensus 2 ~~~~~~g~p~~-----------------------------~~~~~~~~~~~~~~~~-----~~~Y~~~~G~~~lr~aia~ 47 (350)
T TIGR03537 2 LFDFGTGDPKE-----------------------------PTPPFIRKALIDAVPE-----VSQYPSALGTKALREAISG 47 (350)
T ss_pred eEeccCCCCCC-----------------------------CCCHHHHHHHHHHHhc-----cCCCCCCCCCHHHHHHHHH
Confidence 67899999876 4467777777766432 5679999999999999999
Q ss_pred HHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHccCCC---CEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCH
Q 018147 179 GIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSEN---DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLET 254 (360)
Q Consensus 179 ~l~~~~g~~~~~~-~I~~t~Ga~~al~~~~~~l~~~~g---d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 254 (360)
++.+++|+.++++ +|++|+|+++++..++..++. +| |+|+++.|+|+.|...++..|++++.++++++++|.+|+
T Consensus 48 ~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~-~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 126 (350)
T TIGR03537 48 WFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFID-PEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRL 126 (350)
T ss_pred HHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcC-CCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCH
Confidence 9999999999998 999999999999999999984 77 699999999999999999999999999998666789999
Q ss_pred HHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhC
Q 018147 255 SEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (360)
Q Consensus 255 ~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~ 334 (360)
+++++++.+ ++|++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ..++... .
T Consensus 127 ~~l~~~~~~------~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~----~ 194 (350)
T TIGR03537 127 EKVEKSILE------ETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEP--PHSALEV----G 194 (350)
T ss_pred HHHHHhhhh------ccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCC--CCchhhc----C
Confidence 999999876 799999999999999999999999999999999999999999999877643 4444332 1
Q ss_pred CCCCCceEEEEeccCcCc-cccccccC
Q 018147 335 YGEKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 335 ~~~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
.+ ++|+++||||.| .+|+|+||
T Consensus 195 ---~~-~~i~~~s~SK~~g~~GlRiG~ 217 (350)
T TIGR03537 195 ---IE-NVLAFHSLSKRSGMTGYRSGF 217 (350)
T ss_pred ---cC-CEEEEeecccccCCcccccee
Confidence 23 689999999999 57999998
No 42
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-35 Score=290.14 Aligned_cols=215 Identities=24% Similarity=0.354 Sum_probs=189.2
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+++|++++|+|+. ..++.+.+++.+.+.. ....|.+..|.++||+++
T Consensus 33 ~~~i~l~~~~~~~-----------------------------~~~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~i 79 (391)
T PRK08361 33 ENVISLGIGEPDF-----------------------------DTPKNIKEAAKRALDE----GWTHYTPNAGIPELREAI 79 (391)
T ss_pred cCeEEcCCCCCCC-----------------------------CCCHHHHHHHHHHHhc----CCCCCCCCCCcHHHHHHH
Confidence 3689999999986 3466777777776654 255798889999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
|+++.+++|..+++++|++|+|+++++..++.+++. +||+|++++|+|..+...++..|++++.++++++++|.+|+++
T Consensus 80 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 158 (391)
T PRK08361 80 AEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLE-EGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDE 158 (391)
T ss_pred HHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcC-CCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHH
Confidence 999998889889999999999999999999999984 9999999999999999999999999999999887778999999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
+++++++ ++++++++|||||||.+++.+++++|+++|+++++++|+||+|.++.|++. ...++.+..
T Consensus 159 l~~~i~~------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~------ 225 (391)
T PRK08361 159 LLELITK------RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGA-KHYPMIKYA------ 225 (391)
T ss_pred HHHhccc------ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCC-CCCCHhhcC------
Confidence 9999876 789999999999999999999999999999999999999999999988653 344544331
Q ss_pred CCCceEEEEeccCcCcc-ccccccC
Q 018147 337 EKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++ ++|+++||||.|+ +|+|+||
T Consensus 226 -~~-~~i~~~s~SK~~~~~GlRiG~ 248 (391)
T PRK08361 226 -PD-NTILANSFSKTFAMTGWRLGF 248 (391)
T ss_pred -CC-CEEEEecCchhcCCcHhhhhh
Confidence 23 5899999999997 8999999
No 43
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.1e-35 Score=294.80 Aligned_cols=198 Identities=26% Similarity=0.456 Sum_probs=176.5
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcC--CCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHH-HcC
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA-LHG 236 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~-~~g 236 (360)
...|.+..|.+.||+++|+|+.+++| .++++++|++|+|+++++.+++..++ +|||.|+++.|+|+.|...+. ..|
T Consensus 88 ~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~-~pGD~Vlv~~P~Y~~f~~~~~~~~g 166 (447)
T PLN02607 88 NALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILA-DPGDALLVPTPYYPGFDRDLRWRTG 166 (447)
T ss_pred hhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhC-CCCCEEEEcCCCCcchHHHHHhcCC
Confidence 45688899999999999999998877 36899999999999999999999999 599999999999999998877 479
Q ss_pred CeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 018147 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (360)
Q Consensus 237 ~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~ 316 (360)
+++++++++++++|.+|+++++++++++++++.++|+|+++|||||||.+++++++++|+++|+++|+++|+||+|.+++
T Consensus 167 ~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~ 246 (447)
T PLN02607 167 VKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSV 246 (447)
T ss_pred cEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccc
Confidence 99999999877789999999999999888888899999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHhhCCCC-CCceEEEEeccCcCcc-ccccccC
Q 018147 317 YVPEKKFHSFKKVSRSMGYGE-KDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 317 ~~~~~~~~s~~~~~~~~~~~~-~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
|++. ++.|+.++..++.... ++ ++++++||||.|+ +|+||||
T Consensus 247 f~~~-~f~S~~s~~~~~~~~~~~~-~v~vi~s~SK~fg~~GlRvG~ 290 (447)
T PLN02607 247 FSAS-EFVSVAEIVEARGYKGVAE-RVHIVYSLSKDLGLPGFRVGT 290 (447)
T ss_pred cCCC-CcccHHHHHhhcCCCCCcC-cEEEEEcchhcCCCCcceEEE
Confidence 9864 5888887654432101 33 7899999999997 8999998
No 44
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=1.2e-35 Score=291.19 Aligned_cols=218 Identities=24% Similarity=0.459 Sum_probs=185.4
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
.++|+++.|.|...+. .+|+.+.+++.+.+... ...|++..|.++||+++
T Consensus 30 ~~~i~l~~g~p~~~~~--------------------------~p~~~~~~~~~~~~~~~----~~~Y~~~~g~~~lr~~i 79 (398)
T PRK08363 30 IKVIRLNIGDPVKFDF--------------------------QPPEHMKEAYCRAIKEG----HNYYGPSEGLPELREAI 79 (398)
T ss_pred CCeEEEeCCCCCcCCC--------------------------CCCHHHHHHHHHHHHcC----CCCCCCCCCcHHHHHHH
Confidence 4899999999963111 34677777777766542 45799999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
++++.+++|+.+++++|++|+|+++|+..++.+++ ++||+|+++.|+|+.|...++.+|++++.++..++++|.+|+++
T Consensus 80 a~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~ 158 (398)
T PRK08363 80 VKREKRKNGVDITPDDVRVTAAVTEALQLIFGALL-DPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDD 158 (398)
T ss_pred HHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhC-CCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHH
Confidence 99999999999999999999999999999999998 49999999999999999999999999998843333467899999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
+++++++ ++++|+++|||||||.+++.+++++|+++|+++|+++|+||+|.++.|++. +.++..+..
T Consensus 159 l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~--~~~~~~~~~----- 225 (398)
T PRK08363 159 IRKKITE------KTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGK--HVSPGSLTK----- 225 (398)
T ss_pred HHhhCCc------ceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc--ccCHHHcCc-----
Confidence 9998865 689999999999999999999999999999999999999999999988653 445443321
Q ss_pred CCCceEEEEeccCcCc-cccccccC
Q 018147 337 EKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
+.++|+++||||.| .+|+|+||
T Consensus 226 --~~~vi~~~SfSK~~~~~GlRiG~ 248 (398)
T PRK08363 226 --DVPVIVMNGLSKVYFATGWRLGY 248 (398)
T ss_pred --CCcEEEEecchhccCCccceEEE
Confidence 12589999999995 68999998
No 45
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-35 Score=288.11 Aligned_cols=218 Identities=22% Similarity=0.271 Sum_probs=186.5
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
..+|+++.|+|.. ..+..+.+.+.+.+.. . ....|++..|.++||+++
T Consensus 29 ~~~i~l~~~~~~~-----------------------------~~~~~~~~~~~~~~~~-~--~~~~Y~~~~G~~~lr~~i 76 (386)
T PRK07550 29 GPLIDLSQAVPGY-----------------------------PPPPELLRALAEAAAD-P--AAHLYGPVEGLPELREAY 76 (386)
T ss_pred CCeEEeCCCCCCC-----------------------------CCCHHHHHHHHHHHhC-c--CCcCCCCCCCCHHHHHHH
Confidence 4689999999886 3356666666666542 2 356799999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
++++.+.+|..+++++|++|+|+++++..++.+++. +||+|+++.|+|+.+...++..|++++.++++++++|.+|+++
T Consensus 77 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~ 155 (386)
T PRK07550 77 AAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAG-AGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAA 155 (386)
T ss_pred HHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcC-CCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHH
Confidence 999999999999999999999999999999999984 9999999999999999999999999999999876678899999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
+++++++ ++++|++++||||||.+++.+++++|+++|+++|++||+||+|.++.++.. ...++.... +
T Consensus 156 l~~~~~~------~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~-~~~~~~~~~-~---- 223 (386)
T PRK07550 156 AEALITP------RTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGG-APHDLFADP-D---- 223 (386)
T ss_pred HHHHhcc------cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC-CCcchhhCC-C----
Confidence 9999976 789999999999999999999999999999999999999999999876543 122322211 0
Q ss_pred CCCceEEEEeccCcCcc-ccccccC
Q 018147 337 EKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
+++ ++|+++||||.|+ +|+|+||
T Consensus 224 ~~~-~~i~~~S~SK~~g~~G~RiG~ 247 (386)
T PRK07550 224 WDD-TLVHLYSFSKSYALTGHRVGA 247 (386)
T ss_pred ccc-cEEEEecchhhccCcccceEe
Confidence 122 6899999999998 8999998
No 46
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=2.2e-35 Score=288.15 Aligned_cols=216 Identities=27% Similarity=0.429 Sum_probs=186.9
Q ss_pred cceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHH
Q 018147 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (360)
Q Consensus 98 ~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia 177 (360)
++|+|++|.|+. ..|+.+++++.+.+.. ....|++..|.++||++++
T Consensus 25 ~~i~l~~g~p~~-----------------------------~~~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia 71 (387)
T PRK07777 25 GAVNLGQGFPDE-----------------------------DGPPEMLEAAQEAIAG----GVNQYPPGPGIPELRAAIA 71 (387)
T ss_pred CeEEccCCCCCC-----------------------------CCCHHHHHHHHHHHhc----CCCCCCCCCCCHHHHHHHH
Confidence 789999999987 2356677776666654 2467999999999999999
Q ss_pred HHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCC-CCcCCCHH
Q 018147 178 AGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEA-TGWGLETS 255 (360)
Q Consensus 178 ~~l~~~~g~~~~~~-~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~ 255 (360)
+++.+++|..++++ +|++|+|+++|+..++..++ ++||+|+++.|+|+.|...++..|.+++.++++++ ++|.+|++
T Consensus 72 ~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~-~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~ 150 (387)
T PRK07777 72 AQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLV-EPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLD 150 (387)
T ss_pred HHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhc-CCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHH
Confidence 99999999888886 79999999999999999998 49999999999999999999999999999999876 47889999
Q ss_pred HHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCC
Q 018147 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (360)
Q Consensus 256 ~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~ 335 (360)
+|++++.+ ++++|++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++. .+.++..+ +++
T Consensus 151 ~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~-~~~~~~~~-~~~-- 220 (387)
T PRK07777 151 ALRAAVTP------RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA-RHLPLATL-PGM-- 220 (387)
T ss_pred HHHHhcCc------ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC-CcccHhhC-CCC--
Confidence 99998875 789999999999999999999999999999999999999999999998664 34455432 111
Q ss_pred CCCCceEEEEeccCcCcc-ccccccC
Q 018147 336 GEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 336 ~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.+ ++|+++||||.|+ +|+|+||
T Consensus 221 --~~-~~i~~~S~SK~~g~~GlRiG~ 243 (387)
T PRK07777 221 --RE-RTVTISSAAKTFNVTGWKIGW 243 (387)
T ss_pred --cC-cEEEEeechhhccCcCceeEE
Confidence 22 5899999999998 8999998
No 47
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-35 Score=288.04 Aligned_cols=218 Identities=26% Similarity=0.414 Sum_probs=189.1
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+++|++++|+|+. ..|+.+.+++.+.+.+. ...|++..|.++||+++
T Consensus 24 ~~~i~l~~g~~~~-----------------------------~~~~~~~~~~~~~~~~~----~~~Y~~~~G~~~lr~~l 70 (382)
T PRK06108 24 EGVLPLWFGESDL-----------------------------PTPDFIRDAAAAALADG----ETFYTHNLGIPELREAL 70 (382)
T ss_pred CCeEEecCCCCCC-----------------------------CCCHHHHHHHHHHHhcC----CCCCCCCCCCHHHHHHH
Confidence 4789999999986 44777888877777652 45699999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCC-CCcCCCHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEA-TGWGLETS 255 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~ 255 (360)
++++.+++|..+++++|++|+|+++++..++..++. +||+|+++.|+|+.|...++..|++++.++++.+ ++|.+|++
T Consensus 71 a~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~ 149 (382)
T PRK06108 71 ARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVG-PGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLD 149 (382)
T ss_pred HHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcC-CCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHH
Confidence 999999889889999999999999999999999985 9999999999999999999999999999999753 46889999
Q ss_pred HHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCC
Q 018147 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (360)
Q Consensus 256 ~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~ 335 (360)
+|++.+++ ++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.|++.....++..+..
T Consensus 150 ~l~~~~~~------~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~---- 219 (382)
T PRK06108 150 RLLAAITP------RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAE---- 219 (382)
T ss_pred HHHHhcCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCC----
Confidence 99998865 68999999999999999999999999999999999999999999999873223445444321
Q ss_pred CCCCceEEEEeccCcCcc-ccccccC
Q 018147 336 GEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 336 ~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
. .+ ++|+++||||.|+ +|+|+||
T Consensus 220 ~-~~-~~i~~~S~SK~~g~~G~RiG~ 243 (382)
T PRK06108 220 P-DD-RIIFVNSFSKNWAMTGWRLGW 243 (382)
T ss_pred C-cC-CEEEEeechhhccCcccceee
Confidence 1 12 6899999999996 7999998
No 48
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-35 Score=288.72 Aligned_cols=245 Identities=25% Similarity=0.413 Sum_probs=207.5
Q ss_pred cChhhhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCC
Q 018147 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (360)
Q Consensus 61 ~~~~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~ 140 (360)
+++++.+++......+...++++... . ++++++++|+|.. ..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~l~~~~~~~-----------------------------~~ 45 (393)
T PRK05764 4 LSKRVSRVTPSATLAVTAKAKELKAQ----G-----RDVISLGAGEPDF-----------------------------DT 45 (393)
T ss_pred hhhhhhhcCchHHHHHHHHHHHHHhc----c-----CCEEEeCCCCCCC-----------------------------CC
Confidence 46677777777666666676665443 1 4799999999986 34
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEE
Q 018147 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (360)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv 220 (360)
++.+.+++.+.+.+. ...|++..|...||+++|+++.+.+|..+++++|++|+|+++++..++..++. +||.|++
T Consensus 46 ~~~~~~~~~~~~~~~----~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~-~gd~vl~ 120 (393)
T PRK05764 46 PEHIKEAAIEALDDG----KTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLD-PGDEVII 120 (393)
T ss_pred CHHHHHHHHHHHhcC----CCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcC-CCCEEEe
Confidence 677777777777642 44699999999999999999999889889999999999999999999999984 9999999
Q ss_pred cCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHH
Q 018147 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (360)
Q Consensus 221 ~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~ 300 (360)
++|+|..|...++.+|.+++.++++++++|.+|++++++++++ +++++++++|+||||.+++.+++++|+++|+
T Consensus 121 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~ 194 (393)
T PRK05764 121 PAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITP------KTKALILNSPSNPTGAVYSPEELEAIADVAV 194 (393)
T ss_pred cCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHH
Confidence 9999999999999999999999998777789999999998865 7899999999999999999999999999999
Q ss_pred HcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 301 ~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++|+++|+||+|.++.|++. .+.++.....+. .+ ++|+++||||.|+ +|+|+||
T Consensus 195 ~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~----~~-~~i~~~s~SK~~~~~G~RiG~ 249 (393)
T PRK05764 195 EHDIWVLSDEIYEKLVYDGA-EFTSIASLSPEL----RD-RTITVNGFSKAYAMTGWRLGY 249 (393)
T ss_pred HCCcEEEEeccccceeeCCC-CcccHHHcCCCC----cC-CEEEEecCcccccCccceeEE
Confidence 99999999999999988653 345555432221 12 5899999999998 8999998
No 49
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=3.9e-35 Score=286.47 Aligned_cols=215 Identities=24% Similarity=0.426 Sum_probs=187.5
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+++|++++|+|+. ..++.+.+++.+.+.. ....|++..|.++||+++
T Consensus 28 ~~~i~l~~~~p~~-----------------------------~~~~~~~~a~~~~~~~----~~~~Y~~~~g~~~lr~~i 74 (387)
T PRK07683 28 DNLISLTIGQPDF-----------------------------PTPSHVKEAAKRAITE----NYTSYTHNAGLLELRKAA 74 (387)
T ss_pred CCeEEecCCCCCC-----------------------------CCCHHHHHHHHHHHhc----CCCCCCCCCCCHHHHHHH
Confidence 4789999999885 3366777777777664 256799999999999999
Q ss_pred HHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHH
Q 018147 177 AAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (360)
Q Consensus 177 a~~l~~~~g~~~~~~-~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 255 (360)
|+++.+++|+.++++ +|++|+|+++|+.++++.++. +||+|+++.|+|+.|...++..|++++.++.+++ +|.+|.+
T Consensus 75 a~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~ 152 (387)
T PRK07683 75 CNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILE-PGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRST-GFRLTAE 152 (387)
T ss_pred HHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCC-CCCEEEEcCCCccchHHHHHHcCCEEEEeecCcc-cCCCCHH
Confidence 999998889989998 999999999999999999984 9999999999999999999999999999998754 5888999
Q ss_pred HHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCC
Q 018147 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (360)
Q Consensus 256 ~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~ 335 (360)
++++.+++ +++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++. ..++.+.. +.
T Consensus 153 ~l~~~~~~------~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~-- 221 (387)
T PRK07683 153 ALENAITE------KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQP--HTSIAHFP-EM-- 221 (387)
T ss_pred HHHHhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCC--cCChhhcc-CC--
Confidence 99998865 789999999999999999999999999999999999999999999988653 44554431 11
Q ss_pred CCCCceEEEEeccCcCcc-ccccccC
Q 018147 336 GEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 336 ~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++ ++|+++||||.|+ +|+|+||
T Consensus 222 --~~-~vi~~~s~SK~~~~pGlRiG~ 244 (387)
T PRK07683 222 --RE-KTIVINGLSKSHSMTGWRIGF 244 (387)
T ss_pred --cC-CeEEEeeccccccCccceeEE
Confidence 23 6899999999998 9999999
No 50
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=3.7e-35 Score=286.56 Aligned_cols=216 Identities=21% Similarity=0.306 Sum_probs=187.6
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+++|++++|+|+. ..++.+.+++.+.+.. ....|++..|.+++|+++
T Consensus 30 ~~~i~l~~g~~~~-----------------------------~~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~~ 76 (386)
T PRK09082 30 HGAINLSQGFPDF-----------------------------DGPPYLVEALAYAMAA----GHNQYPPMTGVAALREAI 76 (386)
T ss_pred CCEEEecCCCCCC-----------------------------CCCHHHHHHHHHHHHc----CCCCCCCCCCcHHHHHHH
Confidence 3689999999986 3466677777776654 246799999999999999
Q ss_pred HHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHH
Q 018147 177 AAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (360)
Q Consensus 177 a~~l~~~~g~~~~~~-~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 255 (360)
++++.+.+|..++++ +|++|+|+++++..++..++ ++||+|+++.|+|+.|...++..|++++.++++++ +|.+|++
T Consensus 77 a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~-~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~ 154 (386)
T PRK09082 77 AAKTARLYGRQYDADSEITVTAGATEALFAAILALV-RPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPP-DFRVDWQ 154 (386)
T ss_pred HHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHc-CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcc-cccCCHH
Confidence 999999889888776 89999999999999999998 59999999999999999999999999999999754 5899999
Q ss_pred HHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCC
Q 018147 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (360)
Q Consensus 256 ~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~ 335 (360)
++++.+++ +++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.|++. ++.++... .++
T Consensus 155 ~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~-~~~s~~~~-~~~-- 224 (386)
T PRK09082 155 RFAAAISP------RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGA-GHASVLRH-PEL-- 224 (386)
T ss_pred HHHHhcCc------cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCC-CCCChhhC-cCc--
Confidence 99998876 789999999999999999999999999999999999999999999999764 35565543 211
Q ss_pred CCCCceEEEEeccCcCcc-ccccccC
Q 018147 336 GEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 336 ~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.+ ++|+++||||.|+ +|+|+||
T Consensus 225 --~~-~~i~~~S~SK~~~~~G~RiG~ 247 (386)
T PRK09082 225 --RE-RAFVVSSFGKTYHVTGWKVGY 247 (386)
T ss_pred --cC-cEEEEeechhhccchhhhhhh
Confidence 22 6899999999995 8999999
No 51
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.3e-35 Score=297.50 Aligned_cols=199 Identities=23% Similarity=0.373 Sum_probs=173.6
Q ss_pred CCCCCCCCcCcHHHHHHHHHHHHhhcC--CCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHH-Hc
Q 018147 159 ATGAYSHSQGIKGLRDTIAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA-LH 235 (360)
Q Consensus 159 ~~~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~-~~ 235 (360)
....|++..|.++||+++|+|+.+++| +.+++++|++|+|+++++..++.+|+ +|||.|++++|+|+.|...++ ..
T Consensus 86 ~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~-~pGD~Vlv~~P~Y~~~~~~~~~~~ 164 (496)
T PLN02376 86 DIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLA-DPGDVFLIPSPYYAAFDRDLRWRT 164 (496)
T ss_pred hhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhC-CCCCEEEECCCCccchHHHHHhhC
Confidence 356799999999999999999999888 66899999999999999999999999 599999999999999998887 58
Q ss_pred CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 018147 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (360)
Q Consensus 236 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~ 315 (360)
|++++.++++.+++|++|++.++++++.+.+.+.++|+|+++|||||||.+++.+++++|+++|++++++||+||+|.++
T Consensus 165 G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~ 244 (496)
T PLN02376 165 GVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAAT 244 (496)
T ss_pred CCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCcccc
Confidence 99999999987777999999999888665544558999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCHHHHHHhhCC--CCCCceEEEEeccCcCcc-ccccccC
Q 018147 316 VYVPEKKFHSFKKVSRSMGY--GEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 316 ~~~~~~~~~s~~~~~~~~~~--~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
+|++. ++.++.++...... ..++ ++++++||||.|+ +|+||||
T Consensus 245 ~f~~~-~~~si~~l~~~~~~~~~~~~-~v~vv~S~SK~~glpGlRvG~ 290 (496)
T PLN02376 245 VFAGG-DFVSVAEVVNDVDISEVNVD-LIHIVYSLSKDMGLPGFRVGI 290 (496)
T ss_pred ccCCC-CcccHHHhhccccccccCCC-eEEEEEeccccCCCCcceEEE
Confidence 99874 47787766432110 0123 5778999999996 8999998
No 52
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=3.7e-35 Score=287.95 Aligned_cols=221 Identities=23% Similarity=0.424 Sum_probs=188.4
Q ss_pred cccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHH
Q 018147 96 FDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDT 175 (360)
Q Consensus 96 ~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ 175 (360)
.+++|+|++|+|+..+ ....++.+.+++.+.+.+. ....|.+..|.++||++
T Consensus 30 ~~~~i~l~~g~p~~~~-------------------------~~~~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~a 81 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFG-------------------------NLPTDPEVMQAMKDSLDSG---KYNGYAPTVGALSAREA 81 (401)
T ss_pred CCCeeecCCCCCCCcC-------------------------CCCCCHHHHHHHHHHHhcc---CCCCCCCCCCCHHHHHH
Confidence 3588999999996210 0134677777777766652 25679999999999999
Q ss_pred HHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHH
Q 018147 176 IAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (360)
Q Consensus 176 ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 255 (360)
+|+++.++ |..+++++|++|+|+++++..++.+++. +||+|+++.|+|+.|...++..|++++.++++.+++|++|++
T Consensus 82 ia~~~~~~-~~~~~~~~i~~t~G~~~al~~~~~~l~~-~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~ 159 (401)
T TIGR01264 82 IASYYHNP-DGPIEADDVVLCSGCSHAIEMCIAALAN-AGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLK 159 (401)
T ss_pred HHHHHhhc-CCCCCHHHEEECcChHHHHHHHHHHhCC-CCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHH
Confidence 99999874 5578999999999999999999999995 999999999999999999999999999999877767899999
Q ss_pred HHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCC
Q 018147 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (360)
Q Consensus 256 ~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~ 335 (360)
.+++++++ ++++++++|||||||.+++.+++++|+++|+++|++||+||+|.+|.|++. .+.++..+.
T Consensus 160 ~l~~~~~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~----- 227 (401)
T TIGR01264 160 QLESLIDE------KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGA-TFEPLASLS----- 227 (401)
T ss_pred HHHHHhcc------CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCc-ccccHHHcC-----
Confidence 99988865 689999999999999999999999999999999999999999999998763 355555442
Q ss_pred CCCCceEEEEeccCcCc-cccccccC
Q 018147 336 GEKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 336 ~~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
++.++|+++||||.| .+|+|+||
T Consensus 228 --~~~~vi~~~SfSK~~~~~GlRiG~ 251 (401)
T TIGR01264 228 --STVPILSCGGLAKRWLVPGWRLGW 251 (401)
T ss_pred --CCCcEEEEccCcccCCCccceEEE
Confidence 233589999999985 67999998
No 53
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-35 Score=291.70 Aligned_cols=216 Identities=25% Similarity=0.427 Sum_probs=187.6
Q ss_pred CCccccCcc---CCCCCHHHHHHHH-HHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 018147 128 PSILDRSET---QGLFSADSIERAW-QILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (360)
Q Consensus 128 p~~l~~~~~---~~~~p~~v~~~~~-~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al 203 (360)
+..++++.+ +..+|.+.++++. +.++.........|.+..|.++||+++++++....|+.+++++|++|+|+++|+
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al 168 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL 168 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence 555555555 3467888887754 444433331267899999999999999999998889999999999999999999
Q ss_pred HHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEe-cCCCC
Q 018147 204 HMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNP 282 (360)
Q Consensus 204 ~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~-~P~NP 282 (360)
.++++.++. |||+|++++|+|+....+++.+|++++.+|++++ ++|+|+|++.++.. ++|+++++ +-|||
T Consensus 169 ~l~~~~l~~-pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~---G~~~e~le~~~~~~-----~~k~~y~~P~~qNP 239 (459)
T COG1167 169 DLLLRLLLD-PGDTVLVEDPTYPGALQALEALGARVIPVPVDED---GIDPEALEEALAQW-----KPKAVYVTPTFQNP 239 (459)
T ss_pred HHHHHHhCC-CCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCC---CCCHHHHHHHHhhc-----CCcEEEECCCCCCC
Confidence 999999995 9999999999999999999999999999999977 99999999999875 79999888 77999
Q ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 283 TG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
||.++|.++.++|+++|++||++||+||+|++|.|++. +..++..+.. ++ ++|+++||||.+++|+||||
T Consensus 240 tG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~-p~~~l~~ld~------~~-rViy~gSFSK~l~PglRlG~ 309 (459)
T COG1167 240 TGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGP-PPPPLKALDA------PG-RVIYLGSFSKTLAPGLRLGY 309 (459)
T ss_pred CCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCC-CCCChHhhCC------CC-CEEEEeeehhhcccccceee
Confidence 99999999999999999999999999999999999875 3445655532 34 89999999999999999999
No 54
>PRK07324 transaminase; Validated
Probab=100.00 E-value=1.8e-35 Score=287.53 Aligned_cols=207 Identities=21% Similarity=0.299 Sum_probs=181.6
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
.+|+++++|+|++ ..|+.+ +++.+.+.+. ...|++..|.++||+++
T Consensus 26 ~~~~~~~~~e~~~-----------------------------~~~~~~-~~~~~~~~~~----~~~Y~~~~G~~~lr~~i 71 (373)
T PRK07324 26 SCIDSLTLEELLA-----------------------------LAGKNP-EAFYQELGQK----KLTYGWIEGSPEFKEAV 71 (373)
T ss_pred CCCCCCcHHHHHh-----------------------------ccCcch-HHHHHHHhcC----CccCCCCCCCHHHHHHH
Confidence 5899999999987 335556 7777776653 45899999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
|+++. .+++++|++|+|+++++..++.+++ ++||+|+++.|+|+.|...++..|++++.++++++++|.+|+++
T Consensus 72 a~~~~-----~~~~~~vi~t~G~~~al~~~~~~l~-~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~ 145 (373)
T PRK07324 72 ASLYQ-----NVKPENILQTNGATGANFLVLYALV-EPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDE 145 (373)
T ss_pred HHHhc-----CCChhhEEEcCChHHHHHHHHHHhC-CCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHH
Confidence 99983 2678999999999999999999998 59999999999999999999999999999999887788999999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
+++.+++ ++|+|++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. +.++....
T Consensus 146 l~~~~~~------~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~--~~s~~~~~------ 211 (373)
T PRK07324 146 LRRLVRP------NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGS--TPSIADLY------ 211 (373)
T ss_pred HHHhCCC------CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC--CCChhhcc------
Confidence 9988765 799999999999999999999999999999999999999999999988653 45554321
Q ss_pred CCCceEEEEeccCcCcc-ccccccC
Q 018147 337 EKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
+ ++|+++||||.|+ +|+|+||
T Consensus 212 -~--~~I~~~s~SK~~~~~G~RiG~ 233 (373)
T PRK07324 212 -E--KGISTNSMSKTYSLPGIRVGW 233 (373)
T ss_pred -C--CEEEEecchhhcCCccceeEE
Confidence 2 5799999999998 7999999
No 55
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.3e-34 Score=283.09 Aligned_cols=217 Identities=25% Similarity=0.384 Sum_probs=186.2
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+++|+++.|+|+. ..|+.+.+++.+.+... ...|.+..|.++||+++
T Consensus 30 ~~~i~l~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~----~~~Y~~~~g~~~lr~~i 76 (391)
T PRK07309 30 PGILKLTLGEPDF-----------------------------TTPDHVKEAAKRAIDAN----QSHYTGMAGLLELRQAA 76 (391)
T ss_pred CCeEEcCCCCCCC-----------------------------CCCHHHHHHHHHHHhcC----CCCCCCCCCcHHHHHHH
Confidence 3689999999986 34666777777666542 44699999999999999
Q ss_pred HHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHH
Q 018147 177 AAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (360)
Q Consensus 177 a~~l~~~~g~~~~~-~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 255 (360)
++++.+++|+.+++ ++|++|+|+++++.+++..++ ++||+|++++|+|..|...++..|.+++.++.++ ++|.+|++
T Consensus 77 a~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~-~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~ 154 (391)
T PRK07309 77 ADFVKEKYNLDYAPENEILVTIGATEALSASLTAIL-EPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTE-NDFVLTPE 154 (391)
T ss_pred HHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCC-cCCcCCHH
Confidence 99999988988775 789999999999999999998 4999999999999999999999999999999864 35789999
Q ss_pred HHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCC
Q 018147 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (360)
Q Consensus 256 ~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~ 335 (360)
.+++++++. ..++++|++++||||||.+++.+++++|+++|++||+++|+||+|.++.|++. .+.++.+..
T Consensus 155 ~l~~~~~~~---~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~-~~~~~~~~~----- 225 (391)
T PRK07309 155 MLEKAILEQ---GDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGE-PHVSIAEYL----- 225 (391)
T ss_pred HHHHHhhcc---CCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCC-CCCCHHHhc-----
Confidence 999988642 12588999999999999999999999999999999999999999999998653 355655442
Q ss_pred CCCCceEEEEeccCcCcc-ccccccC
Q 018147 336 GEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 336 ~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++ ++|+++||||.|+ +|+|+||
T Consensus 226 --~~-~~i~~~S~SK~~g~~GlRvG~ 248 (391)
T PRK07309 226 --PD-QTILINGLSKSHAMTGWRIGL 248 (391)
T ss_pred --cC-CEEEEecChhhccCccceeEE
Confidence 23 6899999999996 8999998
No 56
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-34 Score=282.83 Aligned_cols=215 Identities=22% Similarity=0.311 Sum_probs=185.4
Q ss_pred cceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHH
Q 018147 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (360)
Q Consensus 98 ~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia 177 (360)
++++|+.|.|.. .+|+.+.+++.+.+... ....|.+..|.+++|++++
T Consensus 28 ~~~~l~~g~~~~-----------------------------~~~~~~~~a~~~~~~~~---~~~~Y~~~~G~~~lr~~~~ 75 (389)
T PRK05957 28 GTISLGQGVVSY-----------------------------PPPPEAIEALNNFLANP---ENHKYQAVQGIPPLLEAIT 75 (389)
T ss_pred CeEEccCCCCCC-----------------------------CCCHHHHHHHHHHHhCC---CCCCCCCCCCCHHHHHHHH
Confidence 689999999986 45777888887766543 2467999999999999999
Q ss_pred HHHHhhcCCCCC-CCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 178 AGIEARDGFPAD-PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 178 ~~l~~~~g~~~~-~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
+++.+.+|..++ +++|++|+|+++++..++..++ ++||+|++++|+|..+...++..|++++.++++. +|++|+++
T Consensus 76 ~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~ 152 (389)
T PRK05957 76 QKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAIT-DPGDEIILNTPYYFNHEMAITMAGCQPILVPTDD--NYQLQPEA 152 (389)
T ss_pred HHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCC--CCCcCHHH
Confidence 999998898877 7789999999999999999988 4999999999999999988899999999998853 47899999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
+++++++ ++|+|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++. ++.+......
T Consensus 153 l~~~i~~------~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~-~~~~~~~~~~----- 220 (389)
T PRK05957 153 IEQAITP------KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGV-KHFSPGSIPG----- 220 (389)
T ss_pred HHHhcCc------CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCC-CccChhhCCC-----
Confidence 9999876 799999999999999999999999999999999999999999999988753 3344433211
Q ss_pred CCCceEEEEeccCcCcc-ccccccC
Q 018147 337 EKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
...++|+++||||.|+ +|+|+||
T Consensus 221 -~~~~~i~~~S~SK~~g~~GlRiG~ 244 (389)
T PRK05957 221 -SGNHTISLYSLSKAYGFASWRIGY 244 (389)
T ss_pred -ccCcEEEEecchhhccCccceeEE
Confidence 1126899999999996 8999998
No 57
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-34 Score=280.48 Aligned_cols=216 Identities=23% Similarity=0.350 Sum_probs=187.9
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+++++++.|+|+. ..|+.+.+++.+.+..... ....|.+..|.+++|+++
T Consensus 33 ~~~~~l~~g~p~~-----------------------------~~~~~v~~a~~~~~~~~~~-~~~~y~~~~g~~~lr~~i 82 (394)
T PRK06836 33 DNVFDFSLGNPSV-----------------------------PPPAAVKEALRELAEEEDP-GLHGYMPNAGYPEVREAI 82 (394)
T ss_pred CCeEEecCcCCCC-----------------------------CCCHHHHHHHHHHHhcCCc-CcccCCCCCCCHHHHHHH
Confidence 4789999999886 2366677777766654322 367899999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
++++.+.++..+++++|++|+|+++++..+++.++ ++||.|++++|+|..|...++..|++++.++++++ +|++|+++
T Consensus 83 a~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~ 160 (394)
T PRK06836 83 AESLNRRFGTPLTADHIVMTCGAAGALNVALKAIL-NPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQPDLDA 160 (394)
T ss_pred HHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcCCHHH
Confidence 99999989989999999999999999999999998 49999999999999999999999999999999765 57999999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHH------cCCEEEEccCCCCCccCCCCCCCCHHHHH
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK------EGLVLLADEVYQENVYVPEKKFHSFKKVS 330 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~------~~i~lI~DeaY~~~~~~~~~~~~s~~~~~ 330 (360)
+++++++ ++++|++++|+||||.+++.+++++|+++|++ ||++||+||+|.++.|++. ...++.+.
T Consensus 161 l~~~~~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~- 232 (394)
T PRK06836 161 LEAAITP------KTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGA-EVPYIFKY- 232 (394)
T ss_pred HHhhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCC-CCCChHHc-
Confidence 9999976 79999999999999999999999999999999 8999999999999988753 23343322
Q ss_pred HhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 331 RSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 331 ~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.+ ++|+++||||.|+ +|+|+||
T Consensus 233 -------~~-~~i~~~S~SK~~~~pGlRiG~ 255 (394)
T PRK06836 233 -------YD-NSIVVYSFSKSLSLPGERIGY 255 (394)
T ss_pred -------cC-cEEEEecchhhccCcceeeEE
Confidence 12 5899999999998 8999998
No 58
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=3.3e-34 Score=281.38 Aligned_cols=221 Identities=24% Similarity=0.405 Sum_probs=190.2
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
.++|++++|+|.+.+- ..+++.+.+++.+.+... ....|++..|.+++|+++
T Consensus 31 ~~~i~l~~g~p~~~~~-------------------------~~~~~~~~~~~~~~l~~~---~~~~Y~~~~g~~~lr~~i 82 (403)
T TIGR01265 31 KPIIPLSHGDPSVFGN-------------------------LRTDPEAEEAVKDALRSG---KFNGYAPSVGALAAREAV 82 (403)
T ss_pred CCeEEeCCCCCCccCC-------------------------CCCCHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHH
Confidence 5899999999973111 134677778777776543 245798999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
++++..++|+.+++++|++|+|+++++.+++.+++ .+||+|+++.|+|+.|...++..|++++.++++.+++|++|+++
T Consensus 83 a~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 161 (403)
T TIGR01265 83 AEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALA-NPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDG 161 (403)
T ss_pred HHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhC-CCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHH
Confidence 99999888888899999999999999999999998 59999999999999999999999999999998766678999999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
+++++.+ +++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++. ++.++..+..
T Consensus 162 l~~~~~~------~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~----- 229 (403)
T TIGR01265 162 LEALADE------KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDA-PFIPMASFAS----- 229 (403)
T ss_pred HHHHhCc------CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC-Cccchhhhcc-----
Confidence 9998865 689999999999999999999999999999999999999999999998764 4556554422
Q ss_pred CCCceEEEEeccCcCc-cccccccC
Q 018147 337 EKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
+.++|+++||||.| .+|+|+||
T Consensus 230 --~~~vi~~~S~SK~~~~pGlRiG~ 252 (403)
T TIGR01265 230 --IVPVLSLGGISKRWVVPGWRLGW 252 (403)
T ss_pred --CCcEEEEeecccccCCCcceEEE
Confidence 22689999999996 67999998
No 59
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3e-34 Score=280.90 Aligned_cols=215 Identities=31% Similarity=0.446 Sum_probs=183.6
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
.++|+++.|.|+. ..|+.+.+++.+... ....|++..|.+++|+++
T Consensus 30 ~~~i~l~~~~~~~-----------------------------~~~~~~~~a~~~~~~-----~~~~Y~~~~g~~~lr~~i 75 (397)
T PRK07568 30 IKVYHLNIGQPDI-----------------------------KTPEVFFEAIKNYDE-----EVLAYSHSQGIPELREAF 75 (397)
T ss_pred CCEEEecCCCCCC-----------------------------CCCHHHHHHHHHHhc-----CCcCcCCCCCCHHHHHHH
Confidence 3689999999886 346667777655432 256799999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCC-CHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGL-ETS 255 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-d~~ 255 (360)
++++. .+|.++++++|++|+|+++++..++..++ ++||+|++++|+|..|...++..|++++.++++.+++|.+ +++
T Consensus 76 a~~~~-~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~ 153 (397)
T PRK07568 76 AKYYK-KWGIDVEPDEILITNGGSEAILFAMMAIC-DPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKE 153 (397)
T ss_pred HHHHH-HhCCCCCcceEEEcCChHHHHHHHHHHhc-CCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHH
Confidence 99998 57888999999999999999999999998 4999999999999999999999999999999975555664 689
Q ss_pred HHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCC
Q 018147 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (360)
Q Consensus 256 ~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~ 335 (360)
+|++++++ ++++|+++||+||||.+++.+++++|+++|+++|++||+||+|.++.|++. ++.++..+.. .
T Consensus 154 ~l~~~~~~------~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~-~~~s~~~~~~-~-- 223 (397)
T PRK07568 154 EIEKLITP------KTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGL-KYTSALSLEG-L-- 223 (397)
T ss_pred HHHHhcCc------cceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCC-CccChhhcCC-C--
Confidence 99988866 789999999999999999999999999999999999999999999988764 3556554421 1
Q ss_pred CCCCceEEEEeccCcCcc-ccccccC
Q 018147 336 GEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 336 ~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.+ ++|+++||||.|+ +|+|+||
T Consensus 224 --~~-~~i~~~S~SK~~~~~G~R~G~ 246 (397)
T PRK07568 224 --ED-RVIIIDSVSKRYSACGARIGC 246 (397)
T ss_pred --cC-CEEEEecchhhccCCCcceEE
Confidence 22 6899999999998 6999998
No 60
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=3.4e-34 Score=280.62 Aligned_cols=218 Identities=23% Similarity=0.346 Sum_probs=183.3
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
.++++++.|+|+. ..|+.+++++.+.+... ....|++..|.++||+++
T Consensus 29 ~~~i~l~~g~p~~-----------------------------~~~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~ai 76 (395)
T PRK08175 29 EDIIDFSMGNPDG-----------------------------PTPPHIVEKLCEVAQRP---DTHGYSTSRGIPRLRRAI 76 (395)
T ss_pred CCeEEcCCCCCCC-----------------------------CCCHHHHHHHHHHHhCC---CcCCCCCCCCCHHHHHHH
Confidence 4799999999986 33666777776666442 367899999999999999
Q ss_pred HHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHH
Q 018147 177 AAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (360)
Q Consensus 177 a~~l~~~~g~~~~~~-~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 255 (360)
++++.+++|+.++++ +|++|+|+++++..++..++ ++||+|+++.|+|+.+...++..|++++.+++++++. +.+
T Consensus 77 a~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~ 152 (395)
T PRK08175 77 SRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATL-DHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFN 152 (395)
T ss_pred HHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhC-CCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHH
Confidence 999999899999987 79999999999999999998 5999999999999999999999999999999987643 478
Q ss_pred HHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCC
Q 018147 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (360)
Q Consensus 256 ~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~ 335 (360)
+++++++.. ..++++|++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++. ...++... +.
T Consensus 153 ~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~-~~~~~~~~-~~--- 224 (395)
T PRK08175 153 ELERAIRES---YPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGW-KAPSIMQV-PG--- 224 (395)
T ss_pred HHHHHHhhc---cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCC-CCcchhcC-CC---
Confidence 888877631 12688999999999999999999999999999999999999999999988654 34454433 11
Q ss_pred CCCCceEEEEeccCcCcc-ccccccC
Q 018147 336 GEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 336 ~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
..+ ++|+++||||.|+ +|+|+||
T Consensus 225 -~~~-~~i~~~S~SK~~g~pGlRiG~ 248 (395)
T PRK08175 225 -AKD-VAVEFFTLSKSYNMAGWRIGF 248 (395)
T ss_pred -ccc-CEEEEeeccccccCcchhhee
Confidence 123 5789999999995 8999999
No 61
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-34 Score=286.15 Aligned_cols=196 Identities=20% Similarity=0.230 Sum_probs=158.4
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhh-cCCCC-C--CCCEEEcCChHHHHHHHHHH-----
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEAR-DGFPA-D--PNDIFLTDGASPAVHMMMQL----- 209 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~-~g~~~-~--~~~I~~t~Ga~~al~~~~~~----- 209 (360)
..|+.+.+ +.+.+.. . .|+++.|.+++|+++++++.++ .+... . .++|++|+|+++|+..++.+
T Consensus 113 ~~~~~v~e-~~~~~~~-----~-~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ 185 (527)
T PRK09275 113 DADEFVYE-LVDGIIG-----D-NYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENG 185 (527)
T ss_pred CCCHHHHH-HHHHHhc-----C-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhh
Confidence 33555555 4454432 2 4999999999999999966543 33222 2 34899999999999999886
Q ss_pred HccCCCCEEEEcCCCchHHHHHHHHcC--CeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCC
Q 018147 210 LIRSENDGILCPIPQYPLYSASIALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (360)
Q Consensus 210 l~~~~gd~Vlv~~P~y~~~~~~~~~~g--~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~ 287 (360)
++ +|||+|++++|+|+.|...++..| .+++.++++++++|.+|+++|++++++ ++|+|+|+|||||||.++
T Consensus 186 ll-~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~------~tkai~l~nP~NPTG~v~ 258 (527)
T PRK09275 186 LL-KAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDP------SIKALFLVNPSNPPSVAM 258 (527)
T ss_pred cC-CCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC------CCCEEEEeCCcCCcCCCC
Confidence 56 599999999999999999988775 555666666677899999999998765 899999999999999999
Q ss_pred CHHHHHHHHHHHHH--cCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 288 AEENQRAIVDFCKK--EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 288 ~~~~l~~i~~la~~--~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
+.+++++|+++|++ ++++||+||+|.+|.+ .+.++.... ++ ++|+++||||.|+ +|+|+||
T Consensus 259 s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~----~~~s~~~~~-------~~-~~I~v~SfSK~f~mtG~RlG~ 322 (527)
T PRK09275 259 SDESLEKIADIVNEKRPDLMIITDDVYGTFVD----DFRSLFAVL-------PY-NTILVYSFSKYFGATGWRLGV 322 (527)
T ss_pred CHHHHHHHHHHHHhcCCCcEEEECCCChhhcc----cccCHHHhC-------CC-CEEEEeehhhhccCcHhHHhh
Confidence 99999999999965 4999999999999764 255654432 33 6899999999996 8999999
No 62
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=6.7e-34 Score=279.12 Aligned_cols=240 Identities=25% Similarity=0.400 Sum_probs=188.0
Q ss_pred Chhhhccccc-hhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCC
Q 018147 62 NPKVLKCEYA-VRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (360)
Q Consensus 62 ~~~~~~~~~~-~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~ 140 (360)
|+.+.++..+ ++..+..++.+.+++ .|..++|+++.|+|.. .+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~l~~~~~~~-----------------------------~~ 47 (402)
T TIGR03542 4 NPHFLKLKSSYLFSEINRRVNEFRKK-------HPSADIIRLGIGDTTQ-----------------------------PL 47 (402)
T ss_pred CCCccccCcchHHHHHHHHHHHHHhc-------cCCCCeEEcCCCCCCC-----------------------------CC
Confidence 4555555543 455556666665543 1336899999999987 45
Q ss_pred CHHHHHHHHHHHHcCCC-CCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEE
Q 018147 141 SADSIERAWQILDQIPG-RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGIL 219 (360)
Q Consensus 141 p~~v~~~~~~~l~~~~~-~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vl 219 (360)
++.+.+++.+.+.+... .....|.+..|.++||+++|+++.+. .+++++|++|+|+++++..++ .++ .+||+|+
T Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~it~Ga~~al~~l~-~l~-~~gd~Vl 122 (402)
T TIGR03542 48 PASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFISDGAKCDVFRLQ-SLF-GSDNTVA 122 (402)
T ss_pred CHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEECCCcHHHHHHHH-Hhc-CCCCEEE
Confidence 77788888877765421 12457989999999999999986432 388999999999999999875 455 4999999
Q ss_pred EcCCCchHHHHHHHHcCC-----------eEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCC
Q 018147 220 CPIPQYPLYSASIALHGG-----------TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (360)
Q Consensus 220 v~~P~y~~~~~~~~~~g~-----------~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~ 288 (360)
+++|+|+.|...++.+|+ +++.++++++++|.+|++.. + ++++|+++|||||||.+++
T Consensus 123 v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----~------~~~~i~l~nP~NPTG~~~s 191 (402)
T TIGR03542 123 VQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEE-----P------KIDIIYLCSPNNPTGTVLT 191 (402)
T ss_pred EeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCcccc-----C------CceEEEEeCCCCCCCccCC
Confidence 999999999999999999 99999987666676664321 1 6899999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 289 ~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.+++++|+++|++++++||+||+|.+|.+++. .+.++... +. ..+ ++|+++||||.|+ +|+|+||
T Consensus 192 ~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~-~~~~~~~~-~~----~~~-~vi~~~SfSK~~g~pGlRiG~ 257 (402)
T TIGR03542 192 KEQLKELVDYANEHGSLILFDAAYSAFISDPS-LPHSIFEI-PG----AKE-CAIEFRSFSKTAGFTGVRLGW 257 (402)
T ss_pred HHHHHHHHHHHHHcCeEEEEEchhhhhccCCC-CCcchhhC-CC----Ccc-cEEEEecCccccCCCCcceEE
Confidence 99999999999999999999999999987653 23333332 11 123 6899999999995 8999998
No 63
>PLN02397 aspartate transaminase
Probab=100.00 E-value=8.8e-34 Score=279.88 Aligned_cols=190 Identities=17% Similarity=0.103 Sum_probs=148.9
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCE-----EEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHH
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDI-----FLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL 234 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I-----~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~ 234 (360)
..+|++..|.++||+++++|+.++.+...++++| +.++|+.+ +...+..++ .|||+|++++|+|+.|...++.
T Consensus 84 ~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~-l~~~~~~~~-~pGd~Vlv~~P~y~~y~~~~~~ 161 (423)
T PLN02397 84 NKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLR-LGAEFLARF-YPGSTIYIPNPTWGNHHNIFRD 161 (423)
T ss_pred CCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHH-HHHHHHHHh-CCCCEEEEeCCCchhHHHHHHH
Confidence 5589999999999999999997665433334444 33444433 333444444 4999999999999999999999
Q ss_pred cCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 235 HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 235 ~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
+|++++.+++..+++|++|++.+++.++.. .++++++++++||||||.+++.+++++|+++|++||++||+||+|.+
T Consensus 162 ~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~ 238 (423)
T PLN02397 162 AGVPVRTYRYYDPKTRGLDFDGLLEDLKAA---PDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQG 238 (423)
T ss_pred cCCeEEEeecccCcCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCC
Confidence 999999999854445899999999888642 12577888889999999999999999999999999999999999999
Q ss_pred CccCCC-CCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 315 NVYVPE-KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 315 ~~~~~~-~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
|.|++. .++.++..+.. . .+ ++|+++||||+|+ +|+||||
T Consensus 239 l~~~~~~~~~~~~~~~~~-~----~~-~vI~~~SfSK~~~~~G~RvG~ 280 (423)
T PLN02397 239 FASGDLDADAQSVRMFVE-D----GH-EILVAQSYAKNMGLYGERVGA 280 (423)
T ss_pred ccCCchhhhhHHHHHHHh-c----CC-cEEEEEECcccCCCccccceE
Confidence 998642 12334433321 1 12 5899999999999 7999999
No 64
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=4.5e-34 Score=282.81 Aligned_cols=190 Identities=17% Similarity=0.180 Sum_probs=160.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEc
Q 018147 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (360)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~ 221 (360)
+.+.+++.+.... ...|++..|.++||+++++++.+..+ .+++|++|+|++++|..++++++. |||+|+++
T Consensus 101 p~~~~~~~~~~~~-----~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al~~~~~~l~~-pgd~Vlv~ 171 (431)
T PRK15481 101 PDLSRYFARLSRT-----PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAIERLLCAHLL-PGDSVAVE 171 (431)
T ss_pred HHHHHHHHHhhhh-----hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHHHHHHHHhCC-CCCEEEEe
Confidence 4455555443322 45799999999999999999865432 356999999999999999999994 99999999
Q ss_pred CCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEe-cCCCCcccCCCHHHHHHHHHHHH
Q 018147 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCK 300 (360)
Q Consensus 222 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~-~P~NPTG~~~~~~~l~~i~~la~ 300 (360)
+|+|+.|...++..|++++.++++++ ++|+++|++++++ ++|+++++ |||||||.+++.+++++|+++|+
T Consensus 172 ~P~y~~~~~~~~~~g~~~~~v~~~~~---g~~~~~l~~~~~~------~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~ 242 (431)
T PRK15481 172 DPCFLSSINMLRYAGFSASPVSVDAE---GMQPEKLERALAQ------GARAVILTPRAHNPTGCSLSARRAAALRNLLA 242 (431)
T ss_pred CCCcHHHHHHHHHcCCeEEeeccCCC---CCCHHHHHHHHhc------CCCEEEECCCCCCCCCccCCHHHHHHHHHHHH
Confidence 99999999999999999999999754 6899999999876 78999998 99999999999999999999999
Q ss_pred Hc-CCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 301 KE-GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 301 ~~-~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
++ +++||+||+|.++.+++. .+.... . .+ ++|+++||||.|++|+|+||
T Consensus 243 ~~~~~~ii~De~Y~~~~~~~~---~~~~~~------~-~~-~vi~~~SfSK~~~~GlRiG~ 292 (431)
T PRK15481 243 RYPQVLVIIDDHFALLSSSPY---HSVIPQ------T-TQ-RWALIRSVSKALGPDLRLAF 292 (431)
T ss_pred hcCCceEEecCchhhhccCCC---CCCCcC------C-CC-CEEEEeeeccccCCCceeEE
Confidence 99 999999999999876532 222111 1 23 68999999999999999998
No 65
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-33 Score=260.75 Aligned_cols=216 Identities=22% Similarity=0.392 Sum_probs=195.2
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
++++.|.+.+.++ ..||.+++++++.++. +..+|+ .+..++.+++
T Consensus 25 ~DvlPmWVADMDf-----------------------------~~pp~i~~Al~~rvdh----GvfGY~--~~~~~~~~ai 69 (388)
T COG1168 25 EDVLPMWVADMDF-----------------------------PTPPEIIEALRERVDH----GVFGYP--YGSDELYAAI 69 (388)
T ss_pred CCcceeeeecccC-----------------------------CCCHHHHHHHHHHHhc----CCCCCC--CCCHHHHHHH
Confidence 5899999999998 6799999999999887 477787 5578899999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecC-CCCCcCCCHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLD-EATGWGLETS 255 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~ 255 (360)
++|.++++++.++++.|++++|...++..+++.|.+ +||.|++..|.|+++...++..|.+++..|+. +++.|.+|++
T Consensus 70 ~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~-~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~ 148 (388)
T COG1168 70 AHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTK-PGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFD 148 (388)
T ss_pred HHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCc-CCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHH
Confidence 999999999999999999999999999999999995 99999999999999999999999999999997 5567899999
Q ss_pred HHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCC
Q 018147 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (360)
Q Consensus 256 ~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~ 335 (360)
+|++++.+. ++|++++||||||||.+++++++++|.++|++||+.||+||+|+++++.+. ++.++..+.+...
T Consensus 149 ~LE~~~~~~-----~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~-~h~~~a~ls~~~a- 221 (388)
T COG1168 149 ALEKAFVDE-----RVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGH-KHIPFASLSERFA- 221 (388)
T ss_pred HHHHHHhcC-----CccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCC-CccchhhcChhhh-
Confidence 999999874 689999999999999999999999999999999999999999999999996 5888877766443
Q ss_pred CCCCceEEEEeccCcCcc-cccccc
Q 018147 336 GEKDISLVSFQSVSKGRY-FHFFSK 359 (360)
Q Consensus 336 ~~~~~~~i~~~S~SK~~~-g~~RvG 359 (360)
| +.|.+.|-||+|. +|++..
T Consensus 222 ---~-~~it~~saSKtFNlaGL~~a 242 (388)
T COG1168 222 ---D-NSITLTSASKTFNLAGLKCA 242 (388)
T ss_pred ---c-ceEEEeeccccccchhhhhe
Confidence 4 6899999999985 466543
No 66
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1e-33 Score=274.44 Aligned_cols=204 Identities=16% Similarity=0.269 Sum_probs=172.3
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
.++|+|+.|++.+ ++|+.+++++.+.+.+ ...|+ ..|.++||+++
T Consensus 29 ~~~i~l~~nen~~-----------------------------~~~~~v~~a~~~~~~~-----~~~Yp-~~g~~~Lr~ai 73 (366)
T PRK01533 29 HSFVKLASNENPF-----------------------------GCSPRVLDELQKSWLD-----HALYP-DGGATTLRQTI 73 (366)
T ss_pred CceEEeCCCCCCC-----------------------------CCCHHHHHHHHHHHHh-----cCcCC-CCCHHHHHHHH
Confidence 4789999988876 6788899988776654 22464 56899999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
|+++ ++++++|++|+|+++++..++++++. +||+|++++|+|+.|...++..|++++.+++++ +++|+++
T Consensus 74 a~~~------~~~~~~I~vt~Gs~e~i~~~~~~l~~-~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~---~~~d~~~ 143 (366)
T PRK01533 74 ANKL------HVKMEQVLCGSGLDEVIQIISRAVLK-AGDNIVTAGATFPQYRHHAIIEGCEVKEVALNN---GVYDLDE 143 (366)
T ss_pred HHHh------CCCcceEEECCCHHHHHHHHHHHhcC-CCCEEEEcCCcHHHHHHHHHHcCCEEEEeecCC---CCcCHHH
Confidence 9998 47899999999999999999999984 999999999999999999999999999999853 4799999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
|++++++ ++++++++|||||||.+++.+++++|+++|++++ ++|+||+|.+|.+++. ..+...... .
T Consensus 144 l~~~~~~------~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~--~~~~~~~~~----~ 210 (366)
T PRK01533 144 ISSVVDN------DTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKD--FPETLPLLE----K 210 (366)
T ss_pred HHHHhCc------CCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhcccc--CcchhHHhc----c
Confidence 9998866 7899999999999999999999999999998766 5777999999877542 333333222 1
Q ss_pred CCCceEEEEeccCcCcc-ccccccC
Q 018147 337 EKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++ ++|+++||||.|+ +|+|+||
T Consensus 211 ~~--~vi~~~SfSK~~~l~GlRiG~ 233 (366)
T PRK01533 211 HK--NILVLRTFSKAYGLASFRVGY 233 (366)
T ss_pred CC--CEEEEeCchHHhcChHHHHhH
Confidence 22 5899999999998 8999998
No 67
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-33 Score=273.72 Aligned_cols=200 Identities=17% Similarity=0.173 Sum_probs=169.2
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEE
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~V 218 (360)
..|+.+++++.+.+.+... ....|++ .|.+.||+++|+|+++++|+++++++|++|+|+++++..++++++. +||.|
T Consensus 39 ~~~~~~~~al~~~l~~~~~-~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~-~gd~v 115 (368)
T PRK03317 39 PPSPALVADIAEAVAEAAA-GLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGG-PGRTA 115 (368)
T ss_pred CCCHHHHHHHHHHHhhhhh-hhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcC-CCCEE
Confidence 6688899998887764321 3567865 5899999999999999999999999999999999999999999994 99999
Q ss_pred EEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHH
Q 018147 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (360)
Q Consensus 219 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~l 298 (360)
+++.|+|+.|...++..|.+++.++.+ ++|++|+++++++++.. ++++|+++|||||||.+++.+++++|+++
T Consensus 116 ~v~~P~y~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~ 188 (368)
T PRK03317 116 LGFVPSYSMHPIIARGTHTEWVEGPRA--ADFTLDVDAAVAAIAEH-----RPDVVFLTSPNNPTGTALPLDDVEAILDA 188 (368)
T ss_pred EEeCCChHHHHHHHHhcCCeeEEcccC--CCCCCCHHHHHHHHhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999888764 34799999999998743 68899999999999999998888888877
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 299 a~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
| ++++|+||+|.+|.+++. .+...... .++ ++|+++||||+|+ +|+|+||
T Consensus 189 ~---~~~lI~DE~y~~~~~~~~---~~~~~~~~----~~~--~~i~~~SfSK~~g~~GlRiG~ 239 (368)
T PRK03317 189 A---PGIVVVDEAYAEFRRSGT---PSALTLLP----EYP--RLVVSRTMSKAFAFAGGRLGY 239 (368)
T ss_pred C---CceEEEeCCchhhcccCC---cCHHHHHH----hCC--CEEEEEechhhhccchhhhhh
Confidence 7 699999999999876552 23333322 123 5899999999997 7999998
No 68
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=5.9e-34 Score=275.20 Aligned_cols=227 Identities=26% Similarity=0.486 Sum_probs=190.0
Q ss_pred cceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHH-HHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQ-ILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 98 ~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~-~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
++|+|+.|++....+.|. ++++++++.+ ..... ....|++..|.++||+++
T Consensus 2 ~~I~l~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~i 53 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPP-------------------------PPAAIKAAIRGAATSS---SFLGYPPPQGYPELREAI 53 (363)
T ss_dssp TEEESSSSSTSSTTSSHH-------------------------HHHHHHHHHHHHHHHT---GCTSSTCTTHHHHHHHHH
T ss_pred CEEEEECCCCCCcccccc-------------------------hHHHHHHHHHHhhccc---ccccCCCchhhHHHHHHH
Confidence 689999999998655443 5556666554 22222 478999999999999999
Q ss_pred HHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHH-ccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCH
Q 018147 177 AAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLL-IRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLET 254 (360)
Q Consensus 177 a~~l~~~~g~~~~~~-~I~~t~Ga~~al~~~~~~l-~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 254 (360)
|+++.+.+|+.++++ +|++++|+.+++..++..+ . ++||+|+++.|+|+.|...++..|.+++.++++.+++|.+|+
T Consensus 54 a~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~-~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 132 (363)
T PF00155_consen 54 ADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKI-NPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDP 132 (363)
T ss_dssp HHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHS-STTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETH
T ss_pred HHHhhhccCcccccceEEEEecccccchhhhhhcccc-cccccceecCCccccccccccccCceeeeccccccccccccc
Confidence 999998889999999 9999999999999999999 6 499999999999999999999999999999988777899999
Q ss_pred HHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhC
Q 018147 255 SEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (360)
Q Consensus 255 ~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~ 334 (360)
++|++.+++...++.+++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ++.+......
T Consensus 133 ~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~--- 208 (363)
T PF00155_consen 133 EALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDP-DFGPIRSLLD--- 208 (363)
T ss_dssp HHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSS-HTHHHHGHHT---
T ss_pred cccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCC-ccCccccccc---
Confidence 999999987555544578999999999999999999999999999999999999999999988764 2333222212
Q ss_pred CCCCCceEEEEeccCcCcc-ccccccC
Q 018147 335 YGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 335 ~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.+. ++|+++||||+|+ +|+|+||
T Consensus 209 -~~~--~vi~~~S~SK~~g~~GlRvG~ 232 (363)
T PF00155_consen 209 -EDD--NVIVVGSLSKSFGLPGLRVGY 232 (363)
T ss_dssp -TTS--TEEEEEESTTTTTSGGGTEEE
T ss_pred -ccc--cceeeeecccccccccccccc
Confidence 112 4899999999997 7999998
No 69
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-33 Score=272.75 Aligned_cols=201 Identities=17% Similarity=0.257 Sum_probs=165.5
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhc--CCCCCCCCEEEcCChHHHHHHHHHHHccCCCC
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARD--GFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~--g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd 216 (360)
.+|+.+++++.+.+.... ....|++ .|.++||+++|+|+.+++ |+.+++++|++|+|+++++..++.+++. +||
T Consensus 41 ~~~~~~~~~~~~~~~~~~--~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~~-~g~ 116 (374)
T PRK02610 41 DLPPDLKQKLAWLYQQGI--ESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCL-GGE 116 (374)
T ss_pred CCCHHHHHHHHHHHhhcc--cccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHcC-CCC
Confidence 678889999888766521 1356865 699999999999998876 5779999999999999999988888774 776
Q ss_pred -EEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHH
Q 018147 217 -GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (360)
Q Consensus 217 -~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i 295 (360)
.|+++.|+|+.|...++.+|++++.++++++ +|++|+++|++++++.. ..++|+|+++|||||||.+++.+++++|
T Consensus 117 ~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~~~~~~--~~~~k~i~l~~P~NPTG~~~s~~~l~~l 193 (374)
T PRK02610 117 GSILVAEPTFSMYGILAQTLGIPVVRVGRDPE-TFEIDLAAAQSAIEQTQ--NPPVRVVFVVHPNSPTGNPLTAAELEWL 193 (374)
T ss_pred CeEEEcCCChHHHHHHHHHcCCEEEEecCCcc-cCCCCHHHHHHHHHhhc--CCCceEEEEeCCCCCCCCCCCHHHHHHH
Confidence 8999999999999999999999999998643 58999999999886410 1279999999999999999999999999
Q ss_pred HHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCc-cccccccC
Q 018147 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 296 ~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
+++| ++++||+||+|.+|.+.. .+..+ . .++ ++|+++||||.| .+|+|+||
T Consensus 194 ~~~~--~~~~iI~De~Y~~~~~~~-----~~~~~-~----~~~--~~ivi~SfSK~~g~~GlRiG~ 245 (374)
T PRK02610 194 RSLP--EDILVVIDEAYFEFSQTT-----LVGEL-A----QHP--NWVILRTFSKAFRLAAHRVGY 245 (374)
T ss_pred Hhcc--CCcEEEEeccccccCccc-----hHHHH-h----cCC--CEEEEEecchhccCcccceee
Confidence 9887 489999999999975321 11111 1 123 478899999999 68999999
No 70
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=7.5e-33 Score=267.33 Aligned_cols=192 Identities=19% Similarity=0.277 Sum_probs=162.7
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEE
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~V 218 (360)
.+|+.+++++.+.+.. ...|++. |.++||+++|+|+ ++++++|++|+|+++++..+++++ .+ ++|
T Consensus 32 ~~p~~~~~a~~~~~~~-----~~~Y~~~-~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l~~~~~~~--~~-~~v 96 (354)
T PRK06358 32 GVPESLKQAITENLDK-----LVEYPDP-DYLELRKRIASFE------QLDLENVILGNGATELIFNIVKVT--KP-KKV 96 (354)
T ss_pred CCCHHHHHHHHHHHHh-----hhcCCCc-cHHHHHHHHHHHh------CCChhhEEECCCHHHHHHHHHHHh--CC-CcE
Confidence 4578888888877643 4568765 5899999999998 578999999999999999999986 24 689
Q ss_pred EEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHH
Q 018147 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (360)
Q Consensus 219 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~l 298 (360)
+++.|+|+.|...++..|++++.++++++++|.+| +++++.+.+ ++++++++|||||||.+++.+++++|+++
T Consensus 97 ~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~ 169 (354)
T PRK06358 97 LILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKE------EIDLVFLCNPNNPTGQLISKEEMKKILDK 169 (354)
T ss_pred EEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhcc------CCCEEEEeCCCCCCCCccCHHHHHHHHHH
Confidence 99999999999999999999999999877778999 666665544 68999999999999999999999999999
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 299 a~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
|++++++||+||+|.+|.+++. +.+...... . .+ ++|+++||||.|+ +|+|+||
T Consensus 170 a~~~~~~ii~De~Y~~~~~~~~--~~~~~~~~~----~-~~-~vi~~~S~SK~~gl~G~RiG~ 224 (354)
T PRK06358 170 CEKRNIYLIIDEAFMDFLEENE--TISMINYLE----N-FK-NLIIIRAFTKFFAIPGLRLGY 224 (354)
T ss_pred HHhcCCEEEEeCcccccCCCcc--chhHHHhcc----C-CC-CEEEEEechhhccCcchhhee
Confidence 9999999999999999988654 334333322 1 12 6899999999998 9999999
No 71
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=4.6e-33 Score=277.67 Aligned_cols=195 Identities=22% Similarity=0.270 Sum_probs=157.6
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHH-HHHhhcCCC-CCCC--CEEEcCChHHHHHHHHHH-----Hc
Q 018147 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAA-GIEARDGFP-ADPN--DIFLTDGASPAVHMMMQL-----LI 211 (360)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~-~l~~~~g~~-~~~~--~I~~t~Ga~~al~~~~~~-----l~ 211 (360)
|++.+.++.+.+.. . .|+++.|...+++++++ |+.++++.. ..++ +|++|+|+++|+..++.+ ++
T Consensus 108 ~~~~~~~~~~~~~~-----~-~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll 181 (521)
T TIGR03801 108 PDAFLYEMCDGIIG-----D-NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELL 181 (521)
T ss_pred CCHHHHHHHHHhhc-----C-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcC
Confidence 44556666555422 2 48877888888888874 666554433 3333 899999999999999887 56
Q ss_pred cCCCCEEEEcCCCchHHHHHHHHc--CCeEEEeecCCCCC-----cCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcc
Q 018147 212 RSENDGILCPIPQYPLYSASIALH--GGTLVPYYLDEATG-----WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (360)
Q Consensus 212 ~~~gd~Vlv~~P~y~~~~~~~~~~--g~~~~~v~~~~~~~-----~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG 284 (360)
+|||+|+++.|+|+.|...++.. |++++.++++++++ |.+|.+++++++++ ++|+|+|+|||||||
T Consensus 182 -~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~------~~kai~l~nP~NPTG 254 (521)
T TIGR03801 182 -KKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDP------SIKALFVVNPSNPPS 254 (521)
T ss_pred -CCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCC------CCcEEEEeCCCCCCC
Confidence 59999999999999999987775 78888888865443 99999999987765 799999999999999
Q ss_pred cCCCHHHHHHHHHHHHHc--CCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 285 QVLAEENQRAIVDFCKKE--GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 285 ~~~~~~~l~~i~~la~~~--~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.+++.+++++|+++|+++ +++||+||+|.+|.+ ++.|+.... ++ ++|+++||||.|+ +|+|+||
T Consensus 255 ~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~----~~~sl~~~~-------~~-~vI~v~SfSK~fg~~G~RlG~ 321 (521)
T TIGR03801 255 VAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD----DFRSLFAEL-------PY-NTIGVYSFSKYFGATGWRLGT 321 (521)
T ss_pred CCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc----cccchhhhC-------CC-CEEEEEcchhhccCchhhhhh
Confidence 999999999999999986 899999999999765 255654432 33 6899999999995 8999999
No 72
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6e-33 Score=268.20 Aligned_cols=203 Identities=18% Similarity=0.319 Sum_probs=170.8
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
.++|++++|++.+ .+|+.+++++.+.+.. ...|++ .|.++||+++
T Consensus 30 ~~~i~l~~~~~~~-----------------------------~~~~~~~~~~~~~~~~-----~~~Y~~-~~~~~lr~~i 74 (357)
T PRK14809 30 DDLVKLSSNENPH-----------------------------GPSPAAVEAIREAAER-----VHSYPK-ASHADLTAAL 74 (357)
T ss_pred cceeEecCCCCCC-----------------------------CCCHHHHHHHHHHHhh-----hhcCCC-CCHHHHHHHH
Confidence 4799999998776 5677888887776653 456865 6799999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
|+++ ++++++|++|+|+++++..+++++++ +||.|++++|+|+.|...++..|+.++.++++.+++|.++.++
T Consensus 75 a~~~------~~~~~~I~it~G~~~al~~~~~~~~~-~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~ 147 (357)
T PRK14809 75 ADRW------DVSPEQVWLANGGDGALDYLARAMLD-PGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADT 147 (357)
T ss_pred HHHh------CCCcceEEECCCHHHHHHHHHHHhcC-CCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHH
Confidence 9997 57899999999999999999999984 9999999999999999988999999999999766678888888
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
+++.+. ++|+|+++|||||||.+++.+++++|+++|++ +++||+||+|.++.+++ +...... .
T Consensus 148 ~~~~~~-------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~-----~~~~~~~----~ 210 (357)
T PRK14809 148 VLDAYD-------GERIVYLTSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERP-----SAVALVE----E 210 (357)
T ss_pred HHHhhc-------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCc-----hhHHHHh----h
Confidence 777542 57899999999999999999999999999975 78999999999987642 1112222 1
Q ss_pred CCCceEEEEeccCcCcc-ccccccC
Q 018147 337 EKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.+ ++|+++||||.|+ +|+|+||
T Consensus 211 -~~-~vi~~~SfSK~~~~~GlRiG~ 233 (357)
T PRK14809 211 -RD-DVAVLRTFSKAYGLAGLRLGY 233 (357)
T ss_pred -CC-CEEEEecchhHhcCcchhhee
Confidence 12 6899999999997 8999998
No 73
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.4e-33 Score=268.24 Aligned_cols=206 Identities=18% Similarity=0.258 Sum_probs=173.3
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+++|+++.|.|.. ..|+.+.+++.+.... ...|++..| .+||+++
T Consensus 36 ~~~i~l~~~~~~~-----------------------------~~~~~~~~al~~~~~~-----~~~Y~~~~g-~~lr~~i 80 (371)
T PRK05166 36 PRIAKLGSNENPL-----------------------------GPSPAVRRAFADIAEL-----LRLYPDPQG-RALREAI 80 (371)
T ss_pred cceEEcCCCCCCC-----------------------------CCCHHHHHHHHHHHHH-----hhcCCCCcH-HHHHHHH
Confidence 4789999997765 3466777776654432 557999988 4999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
|+++ ++++++|++|+|+++++..++.+++. +||.|+++.|+|+.+...++..|++++.++++++ |++|+++
T Consensus 81 a~~~------~~~~~~i~~t~G~~~~l~~~~~~~~~-~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~ 151 (371)
T PRK05166 81 AART------GVPADRIILGNGSEDLIAVICRAVLR-PGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPD--LGFDLDA 151 (371)
T ss_pred HHHh------CcCHHHEEEcCCHHHHHHHHHHHhcC-CCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCC--CCCCHHH
Confidence 9987 46789999999999999999999984 9999999999999999999999999999998754 6899999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
+++++++ ++++++++|||||||.+++.+++++|+++|++ +++||+||+|.++.+++. +.++.......
T Consensus 152 l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~--~~~~~~~~~~~--- 219 (371)
T PRK05166 152 LCAAVAR------APRMLMFSNPSNPVGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGDD--YPSALTLLKAR--- 219 (371)
T ss_pred HHHhhhc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcC--cccHHHHHhhc---
Confidence 9998876 68999999999999999999999999999874 889999999999886543 44554443321
Q ss_pred CCCceEEEEeccCcCcc-ccccccC
Q 018147 337 EKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.+ ++|+++||||.|+ +|+|+||
T Consensus 220 -~~-~vi~i~SfSK~~~l~GlRiG~ 242 (371)
T PRK05166 220 -GL-PWIVLRTFSKAYGLAGLRVGY 242 (371)
T ss_pred -CC-CEEEEeechHhhhcchhheee
Confidence 12 5899999999998 9999999
No 74
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=3.3e-32 Score=263.12 Aligned_cols=224 Identities=25% Similarity=0.366 Sum_probs=177.2
Q ss_pred ccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHH
Q 018147 69 EYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERA 148 (360)
Q Consensus 69 ~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~ 148 (360)
++.+...+...+.+.++. + .++|+++.|+|.. .+++.+.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~----~-----~~~i~l~~~~p~~-----------------------------~~~~~~~~~~ 43 (357)
T TIGR03539 2 PDFPWDSLAPYKAKAASH----P-----DGIVDLSVGTPVD-----------------------------PVPPLIRAAL 43 (357)
T ss_pred CcchHHHHHHHHHHhhhC----C-----CCeEEccCCCCCC-----------------------------CCCHHHHHHH
Confidence 455556677777666543 1 4789999999975 3356666666
Q ss_pred HHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCC-CCCCCEEEcCChHHHHHHHHHHH-ccCCCCEEEEcCCCch
Q 018147 149 WQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFP-ADPNDIFLTDGASPAVHMMMQLL-IRSENDGILCPIPQYP 226 (360)
Q Consensus 149 ~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~-~~~~~I~~t~Ga~~al~~~~~~l-~~~~gd~Vlv~~P~y~ 226 (360)
.+... ...|++..|.++||+++++++.+++|+. +++++|++|+|+++++..++..+ + ++||.|++++|+|+
T Consensus 44 ~~~~~------~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~-~~gd~Vl~~~p~y~ 116 (357)
T TIGR03539 44 AAAAD------APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGL-GPGDTVVIPELAYP 116 (357)
T ss_pred HHHHh------hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcC-CCCCEEEECCCCcH
Confidence 54432 4569999999999999999999998987 99999999999999999998888 5 59999999999999
Q ss_pred HHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEE
Q 018147 227 LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL 306 (360)
Q Consensus 227 ~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~l 306 (360)
.|...++..|++++.++ +++.+.. . ++++|++++|+||||.+++.+++++|+++|+++|++|
T Consensus 117 ~~~~~~~~~g~~~~~v~---------~~~~l~~---~------~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~i 178 (357)
T TIGR03539 117 TYEVGALLAGATPVAAD---------DPTELDP---V------GPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVV 178 (357)
T ss_pred HHHHHHHhcCCEEeccC---------ChhhcCc---c------CccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEE
Confidence 99999999999988873 2232221 1 6899999999999999999999999999999999999
Q ss_pred EEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCc-cccccccC
Q 018147 307 LADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 307 I~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
|+||+|.++.|++. ..+... +.......+ ++|+++||||.| .+|+|+||
T Consensus 179 i~De~y~~~~~~~~--~~~~~~--~~~~~~~~~-~vi~~~S~SK~~~~~G~R~G~ 228 (357)
T TIGR03539 179 ASDECYLELGWEGR--PVSILD--PRVCGGDHT-GLLAVHSLSKRSNLAGYRAGF 228 (357)
T ss_pred EEecchhhhccCCC--Ccccee--cccCCCccc-cEEEEeccccccCCCceeEEE
Confidence 99999999888653 222111 110000112 589999999998 68999998
No 75
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.1e-32 Score=264.38 Aligned_cols=203 Identities=19% Similarity=0.261 Sum_probs=168.6
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
.++|++++|.+.. ++|+.+++++.+.+.. ...|++. +..++|+++
T Consensus 20 ~~~i~l~~~~~~~-----------------------------~~p~~~~~a~~~~~~~-----~~~y~~~-~~~~lr~~i 64 (356)
T PRK08056 20 DQLLDFSANINPL-----------------------------GMPVSLKRAIIDNLDC-----AERYPDV-EYRHLHQAL 64 (356)
T ss_pred hhEEEeccccCCC-----------------------------CCCHHHHHHHHHHHHh-----cccCcCc-cHHHHHHHH
Confidence 4789999997776 6688899888776654 2358764 689999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
|+++ .+++++|++|+|+++++..+++.+ .+|+ |++++|+|..|...++..|++++.++++++++|.+| ++
T Consensus 65 a~~~------~~~~~~i~it~Ga~~~l~~~~~~l--~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~ 134 (356)
T PRK08056 65 ARHH------QVPASWILAGNGETESIFAVVSGL--KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DA 134 (356)
T ss_pred HHHh------CcChhhEEECCCHHHHHHHHHHHh--CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HH
Confidence 9997 468999999999999999999987 3775 788899999999999999999999999877678777 44
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
+++.+.+ ++|+|+++|||||||.+++.+++++|+++|++++++||+||+|.++.+++. .+.+. ...
T Consensus 135 ~~~~~~~------~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~---~~~---- 200 (356)
T PRK08056 135 ILEALTP------DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDET-GFIPQ---LAD---- 200 (356)
T ss_pred HHHhccC------CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcch-HHHHH---hcc----
Confidence 5555543 799999999999999999999999999999999999999999999877542 12221 111
Q ss_pred CCCceEEEEeccCcCcc-ccccccC
Q 018147 337 EKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++ ++|+++||||.|+ +|+|+||
T Consensus 201 ~~--~~i~~~S~SK~~~~~G~RiG~ 223 (356)
T PRK08056 201 NP--HLWVLRSLTKFYAIPGLRLGY 223 (356)
T ss_pred CC--CEEEEEechhhccCcchhhee
Confidence 12 5899999999999 8999999
No 76
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-32 Score=264.38 Aligned_cols=201 Identities=16% Similarity=0.220 Sum_probs=170.1
Q ss_pred cceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHH
Q 018147 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (360)
Q Consensus 98 ~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia 177 (360)
.++++++|+|.+ +.|+.+++++.+.+.. ...|++. +..+||+++|
T Consensus 33 ~~~~l~~~~~~~-----------------------------~~~~~~~~a~~~~~~~-----~~~Y~~~-~~~~Lr~~ia 77 (369)
T PRK08153 33 FRARIGANESGF-----------------------------GPSPSVIAAMREAAAE-----IWKYGDP-ENHDLRHALA 77 (369)
T ss_pred ceeEecCCCCCC-----------------------------CCCHHHHHHHHHHHHH-----hhcCCCC-ccHHHHHHHH
Confidence 457999999886 5688898888776643 3468877 4899999999
Q ss_pred HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHH
Q 018147 178 AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (360)
Q Consensus 178 ~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L 257 (360)
+++ ++++++|++|+|+++++..++..++. +||.|+++.|+|+.|...++..|++++.+|++.+ .+|++++
T Consensus 78 ~~~------~~~~~~I~it~G~~~~l~~~~~~~~~-~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~---~~~~~~l 147 (369)
T PRK08153 78 AHH------GVAPENIMVGEGIDGLLGLIVRLYVE-PGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD---REDLDAL 147 (369)
T ss_pred HHh------CCCHHHEEEcCCHHHHHHHHHHHhcC-CCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC---CCCHHHH
Confidence 997 47889999999999999999999984 9999999999999999999999999999998654 6889998
Q ss_pred HHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCC
Q 018147 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (360)
Q Consensus 258 ~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~ 337 (360)
++.+... ++++|+++|||||||.+++.+++.+|+++|+ ++++||+||+|.++.+++. ..++.. .+
T Consensus 148 ~~~~~~~-----~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~~--~~~~~~-------~~ 212 (369)
T PRK08153 148 LDAARRE-----NAPLVYLANPDNPMGSWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAGA--APPIDT-------DD 212 (369)
T ss_pred HHHhccc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCccc--chhhhh-------cC
Confidence 8776532 7899999999999999999999999999887 4999999999999887542 323221 11
Q ss_pred CCceEEEEeccCcCcc-ccccccC
Q 018147 338 KDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 338 ~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
+ ++|+++||||.|+ +|+|+||
T Consensus 213 ~--~~i~~~SfSK~~g~~GlRiG~ 234 (369)
T PRK08153 213 P--NVIRMRTFSKAYGLAGARVGY 234 (369)
T ss_pred C--CEEEEecchHhccCcchheee
Confidence 2 5899999999997 8999999
No 77
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=1.1e-31 Score=260.13 Aligned_cols=205 Identities=25% Similarity=0.369 Sum_probs=166.5
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+++|++++|+|.. ..++.+.+++.+... ...|++..|.++||+++
T Consensus 27 ~~~i~l~~~~p~~-----------------------------~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lr~~i 71 (364)
T PRK07865 27 DGIVDLSVGTPVD-----------------------------PVPPVIQEALAAAAD------APGYPTTAGTPELREAI 71 (364)
T ss_pred CCEEEcCCCCCCC-----------------------------CCCHHHHHHHHHHHh------hCCCCCccCCHHHHHHH
Confidence 3689999999875 235556666554332 24799999999999999
Q ss_pred HHHHHhhcCCC-CCCCCEEEcCChHHHHHHHHHHH-ccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCH
Q 018147 177 AAGIEARDGFP-ADPNDIFLTDGASPAVHMMMQLL-IRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLET 254 (360)
Q Consensus 177 a~~l~~~~g~~-~~~~~I~~t~Ga~~al~~~~~~l-~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 254 (360)
|+|+.+++|++ +++++|++|+|+++++..++..+ + ++||.|+++.|+|+.|...++..|++++.++. +
T Consensus 72 a~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~---------~ 141 (364)
T PRK07865 72 VGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGL-GPGDVVVIPELAYPTYEVGARLAGATVVRADS---------L 141 (364)
T ss_pred HHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcC-CCCCEEEECCCCcccHHHHHHhcCCEEEecCC---------h
Confidence 99999999987 99999999999999999988888 6 49999999999999999999999999988742 2
Q ss_pred HHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhC
Q 018147 255 SEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (360)
Q Consensus 255 ~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~ 334 (360)
+++.. + ++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++. ..+... ....
T Consensus 142 ~~l~~---~------~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~--~~~~ 208 (364)
T PRK07865 142 TELGP---Q------RPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAE--PVSILD--PRVC 208 (364)
T ss_pred hhCCc---c------cceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCC--CCcccc--cccc
Confidence 33322 2 689999999999999999999999999999999999999999999888653 222211 1110
Q ss_pred CCCCCceEEEEeccCcCc-cccccccC
Q 018147 335 YGEKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 335 ~~~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
....+ ++|+++||||.| .+|+|+||
T Consensus 209 ~~~~~-~~i~~~S~SK~~~~~GlRiG~ 234 (364)
T PRK07865 209 GGDHT-GLLAVHSLSKQSNLAGYRAGF 234 (364)
T ss_pred CCccc-eEEEEeechhccCCCceeeEE
Confidence 00112 689999999999 58999998
No 78
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=1e-31 Score=262.53 Aligned_cols=208 Identities=20% Similarity=0.283 Sum_probs=159.7
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCC---CCCEEEcCChHHHHHHHHHHHccCCCCEEEE
Q 018147 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPAD---PNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (360)
Q Consensus 144 v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~---~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv 220 (360)
+++.+.+.+.+.......+|++..|.++||+++++++.++.+ ... .++|++|+|+++++.+++.+++ ++||+|++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vlv 98 (388)
T PRK08637 21 YLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHGLSLVADLFV-DQGDTVLL 98 (388)
T ss_pred hHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHHHHHHHHHHhc-CCCCEEEE
Confidence 444444444432222578999999999999999999987653 233 3689999999999999999999 49999999
Q ss_pred cCCCchHHHHHHH-HcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHH
Q 018147 221 PIPQYPLYSASIA-LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (360)
Q Consensus 221 ~~P~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la 299 (360)
++|+|+.|...+. ..|++++.+++..+ ++++|++++++.++.... ...++++++|||||||.+++.+++++|+++|
T Consensus 99 ~~P~y~~~~~~~~~~~g~~vv~v~~~~~-~~~~d~~~l~~~~~~~~~--~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~ 175 (388)
T PRK08637 99 PDHNWGNYKLTFNTRRGAEIVTYPIFDE-DGGFDTDALKEALQAAYN--KGKVIVILNFPNNPTGYTPTEKEATAIVEAI 175 (388)
T ss_pred cCCCCccHHHHHHHhcCCEEEEecccCC-CCcCCHHHHHHHHHhhcc--CCCEEEEEeCCCCCCCCCCCHHHHHHHHHHH
Confidence 9999999998765 58999999998432 247899999998872111 1344677779999999999999999999998
Q ss_pred HH-----cCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcC-ccccccccC
Q 018147 300 KK-----EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKG-RYFHFFSKW 360 (360)
Q Consensus 300 ~~-----~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~-~~g~~RvGw 360 (360)
++ ++++||+||+|.++.|++. +..++.....+ .++++-+++++||||. ..+|+|+||
T Consensus 176 ~~~~~~~~~~~iI~De~Y~~l~~~~~-~~~~~~~~~~~---~~~~vi~i~~~s~SK~~~~pGlRlG~ 238 (388)
T PRK08637 176 KELADAGTKVVAVVDDAYFGLFYEDS-YKESLFAALAN---LHSNILAVKLDGATKEEFVWGFRVGF 238 (388)
T ss_pred HHHHhcCCcEEEEecccchhcccCCc-cchhhHHHhhc---ccccceEEEeccccccCCCcccceEE
Confidence 75 8999999999999999774 34443222111 1234324567799997 467999999
No 79
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=4.1e-32 Score=267.55 Aligned_cols=218 Identities=22% Similarity=0.267 Sum_probs=164.8
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHH-HHHHHHcCC-CCCCCCCCCCcCcHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIER-AWQILDQIP-GRATGAYSHSQGIKGLRD 174 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~-~~~~l~~~~-~~~~~~Y~~~~G~~~lr~ 174 (360)
+++|++++|+|... .+|...+.+ +.+.+.... ......|++..|.++||+
T Consensus 30 ~~~i~l~~g~p~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~ 81 (416)
T PRK09440 30 PGAIMLGGGNPAHI----------------------------PEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIE 81 (416)
T ss_pred CCceeccCCCCCcc----------------------------CCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHH
Confidence 47899999999851 123334443 444443321 013467999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc----CCCCEEEE-cCCCchHHHHHHHHcCC----eEEEeecC
Q 018147 175 TIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR----SENDGILC-PIPQYPLYSASIALHGG----TLVPYYLD 245 (360)
Q Consensus 175 ~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~----~~gd~Vlv-~~P~y~~~~~~~~~~g~----~~~~v~~~ 245 (360)
++|+|+++++|+.+++++|++|+|+++++.+++++++. ++||.|++ +.|+|+.|...+...|. .+..++++
T Consensus 82 aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~ 161 (416)
T PRK09440 82 ALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLP 161 (416)
T ss_pred HHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeeccccccccc
Confidence 99999999999999999999999999999999999984 26899999 69999999886654442 12223343
Q ss_pred CCC-CcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCC
Q 018147 246 EAT-GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (360)
Q Consensus 246 ~~~-~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~ 324 (360)
.++ +|++|+++|+ +.+ ++++++++|||||||.+++.+++++|+++|++++++||+||+|.++... .
T Consensus 162 ~~~~~~~~d~~~l~--~~~------~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-----~ 228 (416)
T PRK09440 162 EGQFKYHVDFEHLH--IDE------DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPG-----I 228 (416)
T ss_pred ccccccCCCHHHcc--cCC------CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCC-----c
Confidence 322 4789999987 232 6899999999999999999999999999999999999999999864211 1
Q ss_pred CHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 325 SFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 325 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
.+....+. ..+ ++|+++||||...+|+|+||
T Consensus 229 ~~~~~~~~----~~~-~vI~~~SfSK~~~pGlRiG~ 259 (416)
T PRK09440 229 IFSEATPL----WNP-NIILCMSLSKLGLPGVRCGI 259 (416)
T ss_pred chhhcCcc----ccC-CeEEEecccccCCCcceEEE
Confidence 11111111 122 68999999998788999999
No 80
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=1.9e-31 Score=281.41 Aligned_cols=208 Identities=14% Similarity=0.193 Sum_probs=170.5
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHHccCCCCE
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDG 217 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~I~~t~Ga~~al~~~~~~l~~~~gd~ 217 (360)
++|+.+++++.+.+... .| ..|.+++|+++++++.+++|+++++ ++|++|+|+++++..++.++++ +||.
T Consensus 710 ppPp~V~eAi~eal~~~------~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~-pGD~ 780 (1082)
T PLN02672 710 PVPSAVKASIFESFVRQ------NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQ-EGGT 780 (1082)
T ss_pred CCCHHHHHHHHHHHhhc------CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcC-CCCE
Confidence 67888988888776542 12 3456789999999999999998865 5899999999999999999994 9999
Q ss_pred EEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCC-CCcccCCCHHHHHHHH
Q 018147 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG-NPTGQVLAEENQRAIV 296 (360)
Q Consensus 218 Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~-NPTG~~~~~~~l~~i~ 296 (360)
|+++.|+|+.|...++..|++++.++++++++|.+|++.|++++++. +.++|+++||+ ||||.+++.+++++|+
T Consensus 781 VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~-----~~~~I~L~nPnhNPTG~v~S~eeLe~Ll 855 (1082)
T PLN02672 781 LCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETV-----KKPWVYISGPTINPTGLLYSNSEIEEIL 855 (1082)
T ss_pred EEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC-----CCCEEEEECcCCCCcCccCCHHHHHHHH
Confidence 99999999999999999999999999987778999999999998641 34589999996 9999999999999999
Q ss_pred HHHHHcCCEEEEccCCCCCccCCCC-CCCCHHHHHHhhCCCCCCceEEEEeccCcCc-cccccccC
Q 018147 297 DFCKKEGLVLLADEVYQENVYVPEK-KFHSFKKVSRSMGYGEKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 297 ~la~~~~i~lI~DeaY~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
++|++||++||+||+|.++.|++.. ...++......+....++.++|+++||||.| .+|+|+||
T Consensus 856 ela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGy 921 (1082)
T PLN02672 856 SVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGF 921 (1082)
T ss_pred HHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHhee
Confidence 9999999999999999999997642 1122332222211100222689999999876 56999999
No 81
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-31 Score=259.73 Aligned_cols=204 Identities=17% Similarity=0.241 Sum_probs=170.6
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+++|+++.|+|.. +.++.+.+++.+.+.. ..|.+..|.+++|+++
T Consensus 29 ~~~i~l~~n~~~~-----------------------------~~~~~v~~a~~~~~~~------~~~~p~~g~~~lr~~i 73 (359)
T PRK03158 29 EKIVKLASNENPY-----------------------------GPSPKVKEAIAAHLDE------LALYPDGYAPELRTKV 73 (359)
T ss_pred CceEEecCCCCCC-----------------------------CCCHHHHHHHHHHHHH------hhcCCCCcHHHHHHHH
Confidence 4788999888765 4577788887776653 2355667899999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
|+++ .+++++|++|+|+++++..+++++++ +||.|++++|+|+.|...+...|++++.++++ ++++|+++
T Consensus 74 a~~~------~~~~~~i~~t~G~~~~l~~~~~~~~~-~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~ 143 (359)
T PRK03158 74 AKHL------GVDEEQLLFGAGLDEVIQMISRALLN-PGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEA 143 (359)
T ss_pred HHHh------CCCHHHEEECCCHHHHHHHHHHHHhC-CCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHH
Confidence 9998 46789999999999999999999984 99999999999999999999999999999987 25889999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
+++++++ ++++++++|||||||.+++.+++.+|++.|+ +|++||+||+|.++.+++. ..+.......
T Consensus 144 l~~~~~~------~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~--~~~~~~~~~~---- 210 (359)
T PRK03158 144 MLKAIDE------QTKIVWICNPNNPTGTYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAED--YPDTLPLLEK---- 210 (359)
T ss_pred HHHhcCC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCcc--cccHHHHHHh----
Confidence 9988765 7899999999999999999999998888774 6999999999999888653 2232232221
Q ss_pred CCCceEEEEeccCcCcc-ccccccC
Q 018147 337 EKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++ ++|+++||||.|+ +|+|+||
T Consensus 211 ~~--~vi~~~S~SK~~g~~GlRiG~ 233 (359)
T PRK03158 211 YE--NLIVLRTFSKAYGLAALRVGY 233 (359)
T ss_pred cC--CEEEEEechHhhcCcchhheh
Confidence 12 5899999999998 7999999
No 82
>PRK09105 putative aminotransferase; Provisional
Probab=99.98 E-value=1.5e-31 Score=259.74 Aligned_cols=188 Identities=18% Similarity=0.180 Sum_probs=157.6
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEE
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~V 218 (360)
++|+.+++++.+.+.. ...|++.. ..+||+++++++ ++++++|++|+|+++++..++..++. +||+|
T Consensus 56 ~~~~~~~~a~~~~~~~-----~~~Y~~~~-~~~Lr~aia~~~------~v~~e~I~it~Gs~~ai~~~~~~l~~-~gd~V 122 (370)
T PRK09105 56 GPSPAARDAAARSAAL-----SGRYDLEL-EDDLRTLFAAQE------GLPADHVMAYAGSSEPLNYAVLAFTS-PTAGL 122 (370)
T ss_pred CCCHHHHHHHHHHHHH-----hcCCCCch-HHHHHHHHHHHh------CcChhhEEEcCChHHHHHHHHHHHcC-CCCEE
Confidence 6788899988877654 23587765 899999999986 46899999999999999999999984 99999
Q ss_pred EEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHH
Q 018147 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (360)
Q Consensus 219 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~l 298 (360)
++++|+|+.|...++..|++++.+++++ +|.+|++++++. .+ ++++++++|||||||.+++.+++++|++.
T Consensus 123 li~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~------~~~~v~l~nP~NPTG~~~~~~~l~~l~~~ 193 (370)
T PRK09105 123 VTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DP------NAGLIYICNPNNPTGTVTPRADIEWLLAN 193 (370)
T ss_pred EEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CC------CCCEEEEeCCCCCCCcCcCHHHHHHHHHh
Confidence 9999999999999999999999999875 378999999875 22 68899999999999999999999999987
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 299 a~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
|+ ++++||+||+|.+|.. . .+...+... ++ ++|+++||||.|+ +|+|+||
T Consensus 194 ~~-~~~~lIvDEaY~~f~~--~---~s~~~~~~~----~~--~vi~~~SfSK~~g~~GlRiG~ 244 (370)
T PRK09105 194 KP-AGSVLLVDEAYIHFSD--A---PSVVDLVAQ----RK--DLIVLRTFSKLYGMAGMRLGL 244 (370)
T ss_pred CC-CCcEEEEECchHHhcc--C---cchHHHHhh----CC--CEEEEecccHhhcCCccceee
Confidence 64 5899999999988542 1 243343221 12 5899999999996 7999999
No 83
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.98 E-value=2.6e-31 Score=258.94 Aligned_cols=199 Identities=16% Similarity=0.290 Sum_probs=162.8
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+++|+|+.|.+.+ .+|+.+++++.+. . ....|++. +..+||+++
T Consensus 52 ~~~i~l~~n~~p~-----------------------------~~~~~v~~a~~~~-~-----~~~~Yp~~-~~~~lr~~i 95 (380)
T PLN03026 52 EDIVKLDANENPY-----------------------------GPPPEVLEALGNM-K-----FPYVYPDP-ESRRLRAAL 95 (380)
T ss_pred cceEEccCCCCCC-----------------------------CCCHHHHHHHHhh-H-----hhccCCCC-CHHHHHHHH
Confidence 4789999997665 4577777766432 1 13457664 689999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
|+++ ++++++|++|+|+++++..++..++ ++||+|++++|+|+.|...++..|++++.+++++ +|.+|+++
T Consensus 96 a~~~------~~~~~~I~~t~Ga~~~i~~~~~~~~-~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~--~~~~d~~~ 166 (380)
T PLN03026 96 AEDS------GLESENILVGCGADELIDLLMRCVL-DPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTP--DFSLDVPR 166 (380)
T ss_pred HHHh------CcChhhEEEcCCHHHHHHHHHHHhc-CCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCC--CCCcCHHH
Confidence 9998 4788999999999999999999998 4999999999999999999999999999999854 47899999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
|++++... ++++|+++|||||||.+++.+++++|++.+ ++||+||+|.+|.+++. . ..... .
T Consensus 167 l~~~~~~~-----~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~~--~---~~~~~----~ 228 (380)
T PLN03026 167 IVEAVETH-----KPKLLFLTSPNNPDGSIISDDDLLKILELP----ILVVLDEAYIEFSTQES--R---MKWVK----K 228 (380)
T ss_pred HHHHHhcc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHhcC----CEEEEECcchhhcCCcc--h---HHHHH----h
Confidence 99988322 799999999999999999988888888653 89999999999876431 1 12222 1
Q ss_pred CCCceEEEEeccCcCcc-ccccccC
Q 018147 337 EKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++ ++|+++||||.|+ +|+|+||
T Consensus 229 ~~--~viv~~SfSK~~glaGlRiGy 251 (380)
T PLN03026 229 YD--NLIVLRTFSKRAGLAGLRVGY 251 (380)
T ss_pred CC--CEEEEecchHhhcCcccccee
Confidence 23 5899999999998 8999998
No 84
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=2.7e-31 Score=255.99 Aligned_cols=196 Identities=20% Similarity=0.270 Sum_probs=162.1
Q ss_pred cceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHH
Q 018147 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (360)
Q Consensus 98 ~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia 177 (360)
++|++++|+|.+ ++|+.+.+++.+.+.+ ....|++. |.++||+++|
T Consensus 25 ~~i~l~~~~~~~-----------------------------~~~~~~~~a~~~~~~~----~~~~y~~~-~~~~lr~aia 70 (353)
T PRK05387 25 KLIKLNTNENPY-----------------------------PPSPKVLEAIRAALGD----DLRLYPDP-NADALRQAIA 70 (353)
T ss_pred ceeeccCCCCCC-----------------------------CCCHHHHHHHHHHhhh----hhhcCCCC-cHHHHHHHHH
Confidence 688999998775 4577788888776654 24578765 5699999999
Q ss_pred HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHH
Q 018147 178 AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (360)
Q Consensus 178 ~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L 257 (360)
+++ .+++++|++|+|+++++.+++++++. +||+|++++|+|+.|...++.+|++++.+++++ +|++|++++
T Consensus 71 ~~~------~~~~~~I~it~G~~~al~~~~~~l~~-~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l 141 (353)
T PRK05387 71 AYY------GLDPEQVFVGNGSDEVLAHAFLAFFN-HDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDD--DFSIDVEDY 141 (353)
T ss_pred HHh------CCCHHHEEEcCCHHHHHHHHHHHhcC-CCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHH
Confidence 998 47899999999999999999999984 999999999999999999999999999999864 378999988
Q ss_pred HHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCC
Q 018147 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (360)
Q Consensus 258 ~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~ 337 (360)
++ ..++++++|||||||.+++.+++++|+++++ ++++|+||+|.+| .+. ... .... .+
T Consensus 142 ~~----------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~--~~~livDe~y~~~--~~~-~~~---~~~~----~~ 199 (353)
T PRK05387 142 LR----------PNGGIIFPNPNAPTGIALPLAEIERILAANP--DSVVVIDEAYVDF--GGE-SAI---PLID----RY 199 (353)
T ss_pred Hh----------cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC--CcEEEEeCccccc--CCc-chH---HHHh----hC
Confidence 63 4678999999999999999999999988653 8999999999884 332 111 2211 12
Q ss_pred CCceEEEEeccCcCcc-ccccccC
Q 018147 338 KDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 338 ~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
+ ++|+++||||.|+ +|+|+||
T Consensus 200 ~--~~i~~~S~SK~~~~~GlR~G~ 221 (353)
T PRK05387 200 P--NLLVVQTFSKSRSLAGLRVGF 221 (353)
T ss_pred C--CEEEEEehhHhhcchhhhcee
Confidence 2 5899999999998 8999998
No 85
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.97 E-value=7.2e-31 Score=254.01 Aligned_cols=189 Identities=18% Similarity=0.174 Sum_probs=151.2
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEE
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~V 218 (360)
.+|+.+++++.+.+.. ...|++.. ..+||+++|+++ ++++++|++|+|++++|..+++.+. +||.|
T Consensus 35 ~~~~~~~~a~~~~~~~-----~~~Y~~~~-~~~Lr~aia~~~------~v~~~~I~it~G~~~~i~~~~~~l~--~g~~v 100 (360)
T PRK07392 35 GPPESVIAAIQSALSA-----LRHYPDPD-YRELRLALAQHH------QLPPEWILPGNGAAELLTWAGRELA--QLRAV 100 (360)
T ss_pred CCCHHHHHHHHHHHHH-----hhcCCCcC-HHHHHHHHHHHh------CcChhhEEECCCHHHHHHHHHHHhC--CCCeE
Confidence 5688888888776654 45688764 689999999998 5789999999999999999999874 68999
Q ss_pred EEcCCCchHHHHHHHHcCCeEEEeecCCCCCc---CCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHH
Q 018147 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGW---GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (360)
Q Consensus 219 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~---~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i 295 (360)
++++|+|+.|...++.+|++++.+++++++++ ..+++.+++.. .++++++++|||||||.+++++++
T Consensus 101 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~nP~NPTG~~~~~~~l--- 170 (360)
T PRK07392 101 YLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-------TPNDGLLLNNPHNPTGKLWSREAI--- 170 (360)
T ss_pred EEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-------cCCCEEEEeCCCCCCCCCcCHHHH---
Confidence 99999999999999999999999999876554 34555554432 157899999999999999996655
Q ss_pred HHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 296 ~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.++|+++++ +|+||+|.+|.+++. +.++..... .++ ++|+++||||.|+ +|+|+||
T Consensus 171 ~~l~~~~~~-~IiDE~y~~~~~~~~--~~s~~~~~~----~~~--~vi~i~S~SK~~~l~GlRiG~ 227 (360)
T PRK07392 171 LPLLEQFAL-VVVDEAFMDFLPPDA--EQSLIPCLA----EYP--NLIILRSLTKFYSLPGLRLGY 227 (360)
T ss_pred HHHHHHCCE-EEEECchhhhccCcc--ccchHHHhh----cCC--CEEEEEechhhhcCCchheee
Confidence 455567775 666999999987653 445444332 122 5899999999998 9999999
No 86
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.97 E-value=7.6e-31 Score=255.59 Aligned_cols=207 Identities=18% Similarity=0.260 Sum_probs=175.8
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
.++|+++.|.+.. ..++.+.+++.+.+... ....|++..|.+++|+++
T Consensus 28 ~~~i~l~~~~~~~-----------------------------~~~~~~~~a~~~~~~~~---~~~~y~~~~g~~~lr~~i 75 (380)
T PRK06225 28 KEMIWMGQNTNHL-----------------------------GPHEEVREAMIRCIEEG---EYCKYPPPEGFPELRELI 75 (380)
T ss_pred CCeEEccCCCCCC-----------------------------CCCHHHHHHHHHHHhcC---CCCCCCCCcchHHHHHHH
Confidence 3788999887765 45788888888877653 256799999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecC-CCCCcCCCHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLD-EATGWGLETS 255 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~ 255 (360)
|+++ ++++++|++|+|+++++..++++++. +||+|++++|+|..+...++..|++++.++++ ++++|.+|++
T Consensus 76 a~~l------~~~~~~v~~~~g~t~al~~~~~~~~~-~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~ 148 (380)
T PRK06225 76 LKDL------GLDDDEALITAGATESLYLVMRAFLS-PGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPE 148 (380)
T ss_pred HHhc------CCCCCcEEEeCCHHHHHHHHHHHhcC-CCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHH
Confidence 9997 46788999999999999999999984 99999999999999999999999999999975 3446899999
Q ss_pred HHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCC
Q 018147 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (360)
Q Consensus 256 ~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~ 335 (360)
.+++.+++ ++++++++||+||||.+++.+++++|+++|+++|+++|+||+|.+|..+. .+.... .
T Consensus 149 ~l~~~~~~------~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~----~~~~~~----~- 213 (380)
T PRK06225 149 LVKENMDE------NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH----TLAAEY----A- 213 (380)
T ss_pred HHHhhcCC------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC----Cchhhc----C-
Confidence 99998876 78999999999999999999999999999999999999999999865422 121111 1
Q ss_pred CCCCceEEEEeccCcCcc-ccccccC
Q 018147 336 GEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 336 ~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++ ++|++.||||.|+ +|+|+||
T Consensus 214 --~~-~~i~~~s~SK~~g~~G~RiG~ 236 (380)
T PRK06225 214 --PE-HTVTSYSFSKIFGMAGLRIGA 236 (380)
T ss_pred --CC-CEEEEeechhhcCCccceeEE
Confidence 23 5899999999997 7999998
No 87
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=9e-31 Score=252.87 Aligned_cols=202 Identities=17% Similarity=0.255 Sum_probs=168.1
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
.++|++++|++.+ ++|+.+++++.+.+... ....|++ .|.++||+++
T Consensus 26 ~~~i~l~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~---~~~~Y~~-~~~~~lr~~i 72 (356)
T PRK04870 26 TGMVKLDAMENPY-----------------------------RLPAELRAELGERLAEV---ALNRYPD-PRAAALKAAL 72 (356)
T ss_pred CCceeCcCCCCCC-----------------------------CCCHHHHHHHHHHhhcc---ccccCCC-CCHHHHHHHH
Confidence 3788898888776 66899999988877642 2567887 5789999999
Q ss_pred HHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHH
Q 018147 177 AAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (360)
Q Consensus 177 a~~l~~~~g~~~~~-~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 255 (360)
|+++ | +.+ ++|++|+|+++++..++.+++ ++||+|+++.|+|+.|...++..|++++.+++++ +|++|++
T Consensus 73 a~~~----~--~~~~~~I~~t~G~~~~i~~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~--~~~~d~~ 143 (356)
T PRK04870 73 RAAM----G--VPAGADVLLGNGSDELIQLLALACA-KPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTA--DFTLDLP 143 (356)
T ss_pred HHHh----C--cCCCCcEEEcCCHHHHHHHHHHHhc-CCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCC--CCCCCHH
Confidence 9998 2 333 589999999999999999998 4999999999999999999999999999999874 4799999
Q ss_pred HHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCC
Q 018147 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (360)
Q Consensus 256 ~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~ 335 (360)
++++++.+. ++++|+++|||||||.+++.+++++|+++| ++++|+||+|.+|.+.. +. ....
T Consensus 144 ~l~~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~~---~~---~~~~---- 205 (356)
T PRK04870 144 AMLAAIAEH-----RPALVFLAYPNNPTGNLFDDADVERIIEAA---PGLVVVDEAYQPFAGDS---WL---PRLA---- 205 (356)
T ss_pred HHHHHhhcC-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHHC---CCEEEEECCchhhcCcc---hH---HHHh----
Confidence 999998643 789999999999999999999999999998 68999999999965421 11 1111
Q ss_pred CCCCceEEEEeccCcCccccccccC
Q 018147 336 GEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 336 ~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
.++ ++|+++||||...+|+|+||
T Consensus 206 ~~~--~vi~~~S~SK~~~~GlRiG~ 228 (356)
T PRK04870 206 RFP--NLLVMRTVSKLGLAGLRLGY 228 (356)
T ss_pred hCC--CEEEEecchhhhhHHHhhhh
Confidence 112 58999999994456999998
No 88
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.97 E-value=1e-30 Score=251.01 Aligned_cols=198 Identities=23% Similarity=0.396 Sum_probs=170.5
Q ss_pred Ccccc--CccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHH
Q 018147 129 SILDR--SETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMM 206 (360)
Q Consensus 129 ~~l~~--~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~ 206 (360)
+++++ |++|.++|+.+++++.+.+.. ...|++. ...++++++++++ |. +++++|++++|+.+.|..+
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~~-----~~rYPd~-~~~~l~~a~a~~~----~~-~~~~~V~~gnGsde~i~~l 91 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALDK-----LNRYPDP-DYRELRAALAEYY----GV-VDPENVLVGNGSDELIELL 91 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHHh-----hccCCCC-cHHHHHHHHHHHh----CC-CCcceEEEcCChHHHHHHH
Confidence 34444 445889999999998887764 6789988 4899999999998 21 6789999999999999999
Q ss_pred HHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccC
Q 018147 207 MQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (360)
Q Consensus 207 ~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~ 286 (360)
+++++. +||+|+++.|+|..|...++..|++++.+++.+ |.+|++.+.+++.+ ++++|++||||||||..
T Consensus 92 ~~~~~~-~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~------~~~lv~i~nPNNPTG~~ 161 (356)
T COG0079 92 VRAFVE-PGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRD------KTKLVFLCNPNNPTGTL 161 (356)
T ss_pred HHHhhc-CCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhc------CCCEEEEeCCCCCCCCC
Confidence 999994 999999999999999999999999999999876 79999999999987 79999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 287 ~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++.++++++++.+.+ +.+||+||+|.+|.- . +....+. +++ ++|+++||||+|+ +|+|+||
T Consensus 162 ~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~--~----~~~~l~~-----~~~-nlivlRTfSKa~gLAGlRlGy 223 (356)
T COG0079 162 LPREELRALLEALPE-GGLVVIDEAYIEFSP--E----SSLELLK-----YPP-NLIVLRTFSKAFGLAGLRVGY 223 (356)
T ss_pred CCHHHHHHHHHhCCC-CcEEEEeCchhhcCC--c----hhhhhcc-----CCC-CEEEEEecHHhhhcchhceee
Confidence 999999999999988 999999999999543 2 1112211 233 5899999999997 5999998
No 89
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.7e-30 Score=250.68 Aligned_cols=189 Identities=22% Similarity=0.404 Sum_probs=155.8
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEE
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~V 218 (360)
.+|+.+++++.+.+... ....|++.. ..++|+++|+++ ++++++|++|+|+++++..++.+++ ++||+|
T Consensus 35 ~~p~~~~~a~~~~~~~~---~~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~it~G~~~~l~~~~~~l~-~~gd~V 103 (351)
T PRK14807 35 ELPEEVIKNIQEIVKSS---QVNIYPDPT-AEKLREELARYC------SVVPTNIFVGNGSDEIIHLIMLAFI-NKGDVV 103 (351)
T ss_pred CCCHHHHHHHHHHhhcC---cccCCCCcc-HHHHHHHHHHHh------CCCcccEEEecCHHHHHHHHHHHhc-CCCCEE
Confidence 67899999988777542 256787654 799999999997 5788999999999999999999998 499999
Q ss_pred EEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHH
Q 018147 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (360)
Q Consensus 219 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~l 298 (360)
++++|+|+.|...++..|++++.+++++ +|++|++++++++++. ++|+|+++|||||||.+++.+++.+++
T Consensus 104 lv~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l~-- 174 (351)
T PRK14807 104 IYPHPSFAMYSVYSKIAGAVEIPVKLKE--DYTYDVGSFIKVIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKII-- 174 (351)
T ss_pred EEeCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHH--
Confidence 9999999999999999999999999874 3789999999988642 789999999999999999976666655
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 299 a~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++++.++|+||+|.++ + +. ...+. .. .++ ++|+++||||.|+ +|+|+||
T Consensus 175 -~~~~~~~ivDe~y~~~-~-~~-~~~~~---~~----~~~--~vi~~~S~SK~~~~~GlRiG~ 224 (351)
T PRK14807 175 -EKSRGIVVVDEAYFEF-Y-GN-TIVDV---IN----EFE--NLIVLRTLSKAFGLAGLRVGY 224 (351)
T ss_pred -HhCCCEEEEeCcchhh-c-cc-chHHH---hh----hCC--CEEEEecchHhcccchhceee
Confidence 4567889999999986 3 32 12221 11 112 5899999999997 9999999
No 90
>PRK03321 putative aminotransferase; Provisional
Probab=99.97 E-value=1e-30 Score=252.10 Aligned_cols=192 Identities=17% Similarity=0.237 Sum_probs=160.0
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEE
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~V 218 (360)
++|+.+.+++.+.+.. ...|+ ..|..++|+++|+++ ++++++|++|+|+++++..++..++ ++||+|
T Consensus 35 ~~~~~~~~a~~~~~~~-----~~~y~-~~g~~~lr~~ia~~~------~~~~~~I~~~~G~~~~l~~~~~~~~-~~gd~V 101 (352)
T PRK03321 35 GPLPSVRAAIARAAAG-----VNRYP-DMGAVELRAALAEHL------GVPPEHVAVGCGSVALCQQLVQATA-GPGDEV 101 (352)
T ss_pred CCCHHHHHHHHHHHHh-----cCcCC-CCcHHHHHHHHHHHh------CcCHHHEEECCCHHHHHHHHHHHhc-CCCCEE
Confidence 5577888888776653 44575 468999999999998 3678999999999999999999988 499999
Q ss_pred EEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHH
Q 018147 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (360)
Q Consensus 219 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~l 298 (360)
+++.|+|..|...++..|++++.++++++ +++|++.+++++++ ++++++++|||||||.+++.+++.++++.
T Consensus 102 li~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~l~~l~~~ 173 (352)
T PRK03321 102 IFAWRSFEAYPILVQVAGATPVQVPLTPD--HTHDLDAMAAAITD------RTRLIFVCNPNNPTGTVVTPAELARFLDA 173 (352)
T ss_pred EeCCCCHHHHHHHHHHcCCEEEEccCCCC--CCCCHHHHHHhhcc------CCCEEEEeCCCCCcCCCcCHHHHHHHHHh
Confidence 99999999999999999999999998754 58899999998865 78999999999999999998888888876
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 299 a~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
| +++++||+||+|.++.+++. ...++ .... .++ ++|+++||||.|+ +|+|+||
T Consensus 174 ~-~~~~~ii~De~y~~~~~~~~-~~~~~-~~~~----~~~--~vi~~~S~SK~~g~~GlRiG~ 227 (352)
T PRK03321 174 V-PADVLVVLDEAYVEYVRDDD-VPDGL-ELVR----DHP--NVVVLRTFSKAYGLAGLRVGY 227 (352)
T ss_pred C-CCCeEEEEechHHHhccCcC-CCcHH-HHHh----hCC--CEEEEecchHHhhhHHHhhhh
Confidence 5 46999999999999988653 12222 2222 112 5899999999997 8999998
No 91
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=5.1e-30 Score=248.49 Aligned_cols=204 Identities=17% Similarity=0.244 Sum_probs=169.7
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
.++++++.|.+.. ++|+.+++++.+.+.. ...|++.. ..++|+++
T Consensus 32 ~~~i~l~~~~~~~-----------------------------~~~~~~~~a~~~~~~~-----~~~y~~~~-~~~lr~~i 76 (367)
T PRK02731 32 ADIIKLASNENPL-----------------------------GPSPKAIEAIRAAADE-----LHRYPDGS-GFELKAAL 76 (367)
T ss_pred CceEEecCCCCCC-----------------------------CCCHHHHHHHHHHHHh-----hcCCCCCc-HHHHHHHH
Confidence 4789999997765 4577788888777653 45688765 47999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
|+++ ++++++|++|+|+++++..++..+++ +||+|+++.|+|..|...++..|++++.++++ +|++|++.
T Consensus 77 a~~~------~~~~~~i~~t~G~~~~l~~~~~~l~~-~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~~~~~ 146 (367)
T PRK02731 77 AEKF------GVDPERIILGNGSDEILELLARAYLG-PGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAK---DYGHDLDA 146 (367)
T ss_pred HHHh------CcCHHHEEEcCCHHHHHHHHHHHhcC-CCCEEEEecCCHHHHHHHHHHcCCeEEEeccc---CCCCCHHH
Confidence 9997 46789999999999999999999984 99999999999999999889999999999883 36899999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
+++.+++ ++++|+++|||||||.+++.+++++|++.|+ +|+++|+||+|.++.+++. ...++ .... .
T Consensus 147 l~~~~~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~-~~~~~-~~~~-~--- 213 (367)
T PRK02731 147 MLAAVTP------RTRLVFIANPNNPTGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKD-YEDGL-ELVA-K--- 213 (367)
T ss_pred HHHHhCC------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcC-cccHH-HHHh-h---
Confidence 9998865 7899999999999999999999999998875 6999999999999888653 22233 2222 1
Q ss_pred CCCceEEEEeccCcCcc-ccccccC
Q 018147 337 EKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.+ ++|+++||||.|+ +|+|+||
T Consensus 214 -~~-~~i~~~S~SK~~g~~G~RiG~ 236 (367)
T PRK02731 214 -FP-NVVVTRTFSKAYGLAGLRVGY 236 (367)
T ss_pred -cC-CEEEEeeehHhhcCcccceee
Confidence 12 5899999999996 7999999
No 92
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=5.2e-30 Score=245.88 Aligned_cols=184 Identities=21% Similarity=0.330 Sum_probs=151.0
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEE
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~V 218 (360)
..|+.+++++.+.+... ....|++ .|.++||+++|+++ .+++++|++|+|+++++..++..+ +||+|
T Consensus 31 ~~~~~~~~~~~~~~~~~---~~~~Y~~-~g~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l~~~~~~~---~gd~V 97 (337)
T PRK03967 31 DLPEELKEEIFEELKRV---PFNRYPH-ITSDPLREAIAEFY------GLDAENIAVGNGSDELISYLVKLF---EGKHI 97 (337)
T ss_pred CCCHHHHHHHHHHhhcC---ccccCCC-CCHHHHHHHHHHHh------CcCcceEEEcCCHHHHHHHHHHHh---CCCeE
Confidence 56788998888877543 2567864 68999999999998 378999999999999999888765 69999
Q ss_pred EEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHH
Q 018147 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (360)
Q Consensus 219 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~l 298 (360)
+++.|+|+.|...++..|.+++.+++++ +|++|++.+++++ + ++++++++|||||||.+++.+++.+++
T Consensus 98 ~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~-~------~~~~v~~~~P~NPtG~~~~~~~l~~i~-- 166 (337)
T PRK03967 98 VITPPTFGMYSFYAKLNGIPVIDVPLKE--DFTIDGERIAEKA-K------NASAVFICSPNNPTGNLQPEEEILKVL-- 166 (337)
T ss_pred EEeCCChHHHHHHHHHcCCeEEEeecCC--CCCcCHHHHHHhc-c------CCCEEEEeCCCCCCCCCCCHHHHHHHH--
Confidence 9999999999999999999999999875 3789999998764 2 688999999999999999977666554
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 299 a~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++++++|+||+|.+|.. . +...... .++ ++|+++||||.|+ +|+|+||
T Consensus 167 --~~~~~ii~De~y~~~~~--~----~~~~~~~----~~~--~vi~l~S~SK~~~l~GlRiG~ 215 (337)
T PRK03967 167 --ETGKPVVLDEAYAEFSG--K----SLIGLID----EYP--NLILLRTFSKAFGLAGIRAGY 215 (337)
T ss_pred --hcCCEEEEECchhhhcc--c----chHHHHh----hCC--CEEEEecchHhhcchhhhhee
Confidence 36999999999999642 1 1112211 112 5899999999998 9999999
No 93
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=4.6e-30 Score=239.26 Aligned_cols=196 Identities=24% Similarity=0.458 Sum_probs=179.8
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcC--CCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHc-C
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH-G 236 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~-g 236 (360)
...|.+-.|++.+|+++|+|+.+..| +..+|+++++++|++.+...++-.|+ +|||..++|.|+|+++..-++.. |
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLa-dpgdafLvPtPyY~gfdrdl~~rTg 192 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLA-DPGDAFLVPTPYYPGFDRDLRWRTG 192 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhc-CCCceeeecCCCCCcccccceeccC
Confidence 55688889999999999999988765 44789999999999999999999998 69999999999999998877765 8
Q ss_pred CeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 018147 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (360)
Q Consensus 237 ~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~ 316 (360)
+++++|.+...++|++++++||+++.++++.+.++|.|+|+||+||.|.+++++++..++++|.++|+.+|+||+|..-+
T Consensus 193 veivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sV 272 (471)
T KOG0256|consen 193 VEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSV 272 (471)
T ss_pred ceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-cccccc
Q 018147 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSK 359 (360)
Q Consensus 317 ~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvG 359 (360)
|+.. .|.|++++...... .++ ++-++.|+||-|+ +|.|+|
T Consensus 273 F~~~-~F~Sv~ev~~~~~~-~~~-rvHivyslSKD~GlpGfRvG 313 (471)
T KOG0256|consen 273 FDKS-EFRSVLEVRKDPHL-DPD-RVHIVYSLSKDFGLPGFRVG 313 (471)
T ss_pred cCcc-CceEHHHHhhcccc-CCC-cEEEEEEeccccCCCceEEE
Confidence 9986 79999998765532 356 8999999999997 699998
No 94
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=2.1e-30 Score=249.93 Aligned_cols=172 Identities=22% Similarity=0.365 Sum_probs=147.1
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCC-CEEEEcCCCchHHHHHHHHcCCe
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGT 238 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~g-d~Vlv~~P~y~~~~~~~~~~g~~ 238 (360)
...|++.. ..+|++++++++ ++++++|++|+|+++++..++++++. +| |.|+++.|+|+.|...++..|++
T Consensus 51 ~~~Yp~~~-~~~l~~~~a~~~------g~~~~~I~~~~Gs~e~i~~~~~~~~~-~g~~~vli~~P~y~~y~~~~~~~G~~ 122 (351)
T PRK01688 51 LNRYPECQ-PKAVIENYAAYA------GVKPEQVLVSRGADEGIELLIRAFCE-PGKDAILYCPPTYGMYSVSAETIGVE 122 (351)
T ss_pred cccCCCCC-hHHHHHHHHHHh------CCCHHHEEEcCCHHHHHHHHHHHhcC-CCCCEEEEcCCCHHHHHHHHHHcCCE
Confidence 56687765 578888888876 47899999999999999999999984 87 99999999999999999999999
Q ss_pred EEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccC
Q 018147 239 LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYV 318 (360)
Q Consensus 239 ~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~ 318 (360)
++.+++++ +|++|++++++++ + ++++|+++|||||||.+++.+++++|++.|++ +++||+||+|.+|...
T Consensus 123 ~~~v~~~~--~~~~d~~~l~~~~-~------~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~ 192 (351)
T PRK01688 123 IRTVPTLD--NWQLDLPAIADNL-D------GVKVVYVCSPNNPTGNLINPQDLRTLLELTRG-KAIVVADEAYIEFCPQ 192 (351)
T ss_pred EEEeecCC--CCCCCHHHHHHhc-c------CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCCC
Confidence 99999865 3899999999877 3 68999999999999999999999999999986 6899999999996522
Q ss_pred CCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 319 PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 319 ~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.+...... .++ ++|+++||||.|+ +|+|+||
T Consensus 193 -----~s~~~~~~----~~~--n~iv~rSfSK~~glaGlRiGy 224 (351)
T PRK01688 193 -----ASLAGWLA----EYP--HLVILRTLSKAFALAGLRCGF 224 (351)
T ss_pred -----CChHHHHh----hCC--CEEEEecchHhhcCHHHHHhH
Confidence 23333333 123 5899999999998 7999998
No 95
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=7.8e-30 Score=244.49 Aligned_cols=194 Identities=20% Similarity=0.278 Sum_probs=156.3
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
.++|+|++|+|.+ ++|+.+++++.+.+... ....|++. |.++||+++
T Consensus 19 ~~~i~l~~~~~~~-----------------------------~~p~~~~~~~~~~~~~~---~~~~Y~~~-~~~~Lr~ai 65 (335)
T PRK14808 19 RDRTYLALNENPF-----------------------------PFPEDLVDEVFRRLNSD---TLRIYYDS-PDEELIEKI 65 (335)
T ss_pred CceeEecCCCCCC-----------------------------CCCHHHHHHHHHHhhhh---hhhcCCCC-ChHHHHHHH
Confidence 4789999998887 66888999988766542 23447655 799999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
|+++.+++ +++++|++|+|++++|..+++.+ |.|++++|+|+.|...++.+|++++.++++++ |.++...
T Consensus 66 a~~~~~~~---~~~~~i~it~Ga~~~i~~~~~~~-----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~ 135 (335)
T PRK14808 66 LSYLDTDF---LSKNNVSVGNGADEIIYVMMLMF-----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD--LRIPEVN 135 (335)
T ss_pred HHHhCCCC---CCcceEEEcCCHHHHHHHHHHHh-----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc--CCCChhH
Confidence 99996642 78999999999999999999877 57999999999999999999999999998764 4454322
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
+ + ++++++++|||||||.+++.+++++|+ +++++||+||+|.+|. +. .+.+ ....
T Consensus 136 ----~-~------~~~~i~i~nP~NPTG~~~s~~~l~~l~----~~~~~ii~DE~Y~~f~--~~-~~~~---~~~~---- 190 (335)
T PRK14808 136 ----V-G------EGDVVFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAYYEFH--GE-SYVD---LLKK---- 190 (335)
T ss_pred ----c-c------CCCEEEEeCCCCCCCCCcCHHHHHHHH----hcCCEEEEECchhhhc--CC-chHH---HHHh----
Confidence 1 1 468999999999999999988888876 4799999999999963 22 1222 2221
Q ss_pred CCCceEEEEeccCcCcc-ccccccC
Q 018147 337 EKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++ ++|+++||||.|+ +|+|+||
T Consensus 191 ~~--~vi~~~S~SK~~~l~GlRvG~ 213 (335)
T PRK14808 191 YE--NLAVIRTFSKAFSLAAQRIGY 213 (335)
T ss_pred CC--CEEEEEechhhccCcccceEE
Confidence 12 5899999999999 8999998
No 96
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.97 E-value=7.8e-30 Score=245.17 Aligned_cols=202 Identities=21% Similarity=0.356 Sum_probs=169.7
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+++|++++|++.. ..|+.+++++.+.+.. ...|++..| +++|+++
T Consensus 19 ~~~i~l~~~~~~~-----------------------------~~~~~~~~a~~~~~~~-----~~~y~~~~~-~~lr~~i 63 (346)
T TIGR01141 19 KEVIKLNSNENPF-----------------------------GPPPKAKEALRAEADK-----LHRYPDPDP-AELKQAL 63 (346)
T ss_pred CceEEccCCCCCC-----------------------------CCCHHHHHHHHHhHHH-----hhcCCCCCH-HHHHHHH
Confidence 5799999998876 5688899998887643 456888776 8999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHH
Q 018147 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 256 (360)
|+++ ++++++|++|+|+++++..++.+++. +||+|++++|+|+.|...++..|++++.++++++ +.+|+++
T Consensus 64 a~~~------~~~~~~i~~~~G~~~~l~~~~~~l~~-~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~ 134 (346)
T TIGR01141 64 ADYY------GVDPEQILLGNGSDEIIELLIRAFLE-PGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLED 134 (346)
T ss_pred HHHh------CcChHHEEEcCCHHHHHHHHHHHhcC-CCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHH
Confidence 9998 36789999999999999999999984 9999999999999999999999999999998765 5799999
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
+++++.+ ++++|++++|+||||.+++.+++.++++.|+ +++++|+||+|.++.+.+. +. .....
T Consensus 135 l~~~~~~------~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~--~~---~~~~~---- 198 (346)
T TIGR01141 135 ILVAIDD------KPKLVFLCSPNNPTGNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEPS--TL---PLLAE---- 198 (346)
T ss_pred HHHhcCC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCcc--HH---HHHhh----
Confidence 9997654 7999999999999999999999999998887 7999999999998654321 11 22111
Q ss_pred CCCceEEEEeccCcCc-cccccccC
Q 018147 337 EKDISLVSFQSVSKGR-YFHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~-~g~~RvGw 360 (360)
++ ++|+++|+||.| .+|+|+||
T Consensus 199 ~~--~~i~~~S~sK~~g~~G~r~G~ 221 (346)
T TIGR01141 199 YP--NLIVLRTLSKAFGLAGLRIGY 221 (346)
T ss_pred CC--CEEEEehhhHhhhchhhhcee
Confidence 12 479999999999 57999998
No 97
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=6.2e-30 Score=247.88 Aligned_cols=176 Identities=22% Similarity=0.332 Sum_probs=148.1
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCC-CEEEEcCCCchHHHHHHHHcCCe
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGT 238 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~g-d~Vlv~~P~y~~~~~~~~~~g~~ 238 (360)
...|++.. ..+||+++|+++ ++++++|++|+|+++++..++++++. +| |.|+++.|+|..|...++..|++
T Consensus 53 ~~~Y~~~~-~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l~~~~~~~~~-~g~~~vlv~~p~y~~~~~~~~~~g~~ 124 (364)
T PRK04781 53 TRRYPDPQ-PPGLRSALAALY------GCAPEQLLIGRGSDEAIDLLVRALCV-PGRDAVLVTPPVFGMYAVCARLQNAP 124 (364)
T ss_pred hccCCCCC-HHHHHHHHHHHh------CcChHHEEEeCCHHHHHHHHHHHhcC-CCCCeEEEcCCChHHHHHHHHHcCCE
Confidence 45688765 699999999997 46899999999999999999999984 88 89999999999999999999999
Q ss_pred EEEeecCC-CCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCcc
Q 018147 239 LVPYYLDE-ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317 (360)
Q Consensus 239 ~~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~ 317 (360)
++.+++++ +++|.+|++++++.+... ++++|+++|||||||.+++.+++++|+++|+ ++++||+||+|.+|.+
T Consensus 125 ~~~v~~~~~~~~~~~d~~~l~~~~~~~-----~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~ 198 (364)
T PRK04781 125 LVEVPLVDGADGFHADVPAIVAAALAS-----NAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSD 198 (364)
T ss_pred EEEEecCCCccCCCcCHHHHHHHHhcc-----CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcC
Confidence 99999853 456788999987655332 7899999999999999999999999999886 4799999999999875
Q ss_pred CCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 318 VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 318 ~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.. +...... .++ ++|+++||||+|+ +|+|+||
T Consensus 199 ~~-----~~~~~~~----~~~--~vi~~~SfSK~~gl~GlRvGy 231 (364)
T PRK04781 199 VP-----SAVGLLA----RYD--NLAVLRTLSKAHALAAARIGS 231 (364)
T ss_pred Cc-----chHHHHh----hCC--CEEEEecChhhcccccceeee
Confidence 32 2222222 123 5899999999998 8999998
No 98
>PRK08354 putative aminotransferase; Provisional
Probab=99.97 E-value=1.8e-29 Score=239.53 Aligned_cols=171 Identities=16% Similarity=0.248 Sum_probs=142.5
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEE
Q 018147 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (360)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv 220 (360)
|+.+++++.+.+.. ...|+. ...+|+++++++ | ++|++|+|+++++..++..+ . +||+|++
T Consensus 22 p~~~~~a~~~~~~~-----~~~yp~---~~~l~~~ia~~~----~-----~~I~vt~G~~~al~~~~~~~-~-~gd~vlv 82 (311)
T PRK08354 22 PEWLDEMFERAKEI-----SGRYTY---YEWLEEEFSKLF----G-----EPIVITAGITEALYLIGILA-L-RDRKVII 82 (311)
T ss_pred CHHHHHHHHHHHHH-----hhcCCC---hHHHHHHHHHHH----C-----CCEEECCCHHHHHHHHHHhh-C-CCCeEEE
Confidence 56677777666543 335764 467899999886 2 47999999999999888544 3 8999999
Q ss_pred cCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHH
Q 018147 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (360)
Q Consensus 221 ~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~ 300 (360)
++|+|+.|...++..|++++.+ .+|++.|+++++ ++++++++|||||||.+++.+++++|+++|+
T Consensus 83 ~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~-------~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~ 147 (311)
T PRK08354 83 PRHTYGEYERVARFFAARIIKG--------PNDPEKLEELVE-------RNSVVFFCNPNNPDGKFYNFKELKPLLDAVE 147 (311)
T ss_pred eCCCcHHHHHHHHHcCCEEeec--------CCCHHHHHHhhc-------CCCEEEEecCCCCCCCccCHHHHHHHHHHhh
Confidence 9999999999999999999765 457888887764 3678999999999999999999999999999
Q ss_pred HcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 301 ~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++|+++|+||+|.+|.+++. ..+ .+ ++|+++||||.|+ +|+|+||
T Consensus 148 ~~~~~li~De~y~~f~~~~~--~~~------------~~-~vi~~~S~SK~~~l~GlRiG~ 193 (311)
T PRK08354 148 DRNALLILDEAFIDFVKKPE--SPE------------GE-NIIKLRTFTKSYGLPGIRVGY 193 (311)
T ss_pred hcCcEEEEeCcchhcccccc--ccC------------CC-cEEEEeccHhhcCCccceeee
Confidence 99999999999999988652 111 12 6899999999998 9999998
No 99
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=1.8e-29 Score=241.74 Aligned_cols=170 Identities=15% Similarity=0.232 Sum_probs=142.0
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeE
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTL 239 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~ 239 (360)
...|+... ..+||+++|+++ ++++++|++|+|++++|..++. ++ ++| .|++++|+|+.|...++..|+++
T Consensus 34 ~~~Yp~~~-~~~lr~~ia~~~------~~~~~~I~it~Gs~~~l~~~~~-~~-~~~-~vv~~~P~y~~y~~~~~~~G~~v 103 (332)
T PRK06425 34 ISIYPEIS-YTDIEDQIKIYT------QGLKIKVLIGPGLTHFIYRLLS-YI-NVG-NIIIVEPNFNEYKGYAFTHGIRI 103 (332)
T ss_pred cccCcCcC-HHHHHHHHHHHh------CCCcceEEECCCHHHHHHHHHH-Hh-CCC-cEEEeCCChHHHHHHHHHcCCeE
Confidence 45687665 799999999998 5679999999999999999997 45 476 57777999999999999999999
Q ss_pred EEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCC
Q 018147 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (360)
Q Consensus 240 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~ 319 (360)
+.+|+++ +++|.+.+++ . ++|+|+++|||||||.+++.+++++|+++|++++++||+||+|.+|.+++
T Consensus 104 ~~vp~~~---~~~~~~~l~~----~-----~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~ 171 (332)
T PRK06425 104 SALPFNL---INNNPEILNN----Y-----NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR 171 (332)
T ss_pred EEEeCCc---ccCcHHHHhh----c-----CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccccc
Confidence 9999875 3556554432 1 68999999999999999999999999999999999999999999988753
Q ss_pred CCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 320 EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 320 ~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
. .++..... .++ ++|+++||||.|+ +|+|+||
T Consensus 172 ~---~~~~~~~~----~~~--~vi~~~SfSK~~~l~GlRiGy 204 (332)
T PRK06425 172 A---EEDVLLNR----SYG--NVIIGRSLTKILGIPSLRIGY 204 (332)
T ss_pred c---hhHHHHhc----cCC--CEEEEeecHHhcCCchhhhee
Confidence 2 23333322 122 5899999999999 9999999
No 100
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.3e-29 Score=244.77 Aligned_cols=170 Identities=21% Similarity=0.324 Sum_probs=144.4
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCC-CEEEEcCCCchHHHHHHHHcCCe
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGT 238 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~g-d~Vlv~~P~y~~~~~~~~~~g~~ 238 (360)
...|++.. ..+||+++|+++ ++++++|++|+|++++|..++++++. +| |+|+++.|+|+.|...++..|++
T Consensus 54 ~~~Yp~~~-~~~Lr~aia~~~------~~~~~~I~it~Gs~~~i~~~~~~~~~-~g~d~vlv~~P~y~~y~~~~~~~g~~ 125 (354)
T PRK04635 54 LNRYPECQ-PPELINAYSAYA------GVAPEQILTSRGADEAIELLIRAFCE-PGQDSIACFGPTYGMYAISAETFNVG 125 (354)
T ss_pred hccCCCCC-HHHHHHHHHHHh------CcCHHHEEEeCCHHHHHHHHHHHhcC-CCCCeEEEcCCChHHHHHHHHHcCCE
Confidence 55688874 899999999987 57899999999999999999999984 88 99999999999999999999999
Q ss_pred EEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccC
Q 018147 239 LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYV 318 (360)
Q Consensus 239 ~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~ 318 (360)
++.+|+++ +|.+|++.++. + + ++|+|+|+|||||||.+++.+++++|++.|+ +++||+||+|.+|...
T Consensus 126 v~~v~~~~--~~~~~~~~l~~-~-~------~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~ 193 (354)
T PRK04635 126 VKALPLTA--DYQLPLDYIEQ-L-D------GAKLVFICNPNNPTGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFCPE 193 (354)
T ss_pred EEEEecCC--CCCCCHHHHHh-c-c------CCCEEEEeCCCCCCCccCCHHHHHHHHHhCC--CcEEEEeCchHhhccC
Confidence 99999874 37889988863 3 3 7999999999999999999999999998876 4999999999996532
Q ss_pred CCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 319 PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 319 ~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.++..... .++ ++|+++||||.|+ +|+|+||
T Consensus 194 -----~s~~~~~~----~~~--~~iv~~S~SK~~~l~GlRlG~ 225 (354)
T PRK04635 194 -----YSVADLLA----SYP--NLVVLRTLSKAFALAGARCGF 225 (354)
T ss_pred -----cchHHHHh----hCC--CEEEEechHHHhhhhHHHHhh
Confidence 23333322 123 4799999999997 8999998
No 101
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=5.9e-29 Score=240.44 Aligned_cols=199 Identities=19% Similarity=0.304 Sum_probs=162.0
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
.++|++++|++.. +.++.+++++.+.+.. ...|++..+ +++|+++
T Consensus 34 ~~~i~l~~~~~~~-----------------------------~~~~~~~~~~~~~~~~-----~~~y~~~~~-~~lr~~i 78 (361)
T PRK00950 34 ESIIKLGSNENPL-----------------------------GPSPKAVEAIEKELSK-----IHRYPEPDA-PELREAL 78 (361)
T ss_pred cceEEccCCCCCC-----------------------------CCCHHHHHHHHHHHHh-----hcCCCCCCH-HHHHHHH
Confidence 3789999987665 4577788888776654 346877654 9999999
Q ss_pred HHHHHhhcCCCCCCCCEEE-cCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHH
Q 018147 177 AAGIEARDGFPADPNDIFL-TDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~~-t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 255 (360)
|+++ ++++++|++ |+|+++++..+++.++. +||.|+++.|+|+.|...++..|++++.++.+ ++|.+|++
T Consensus 79 a~~~------~~~~~~i~~~~~Ga~~~i~~~~~~~~~-~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~~ 149 (361)
T PRK00950 79 SKYT------GVPVENIIVGGDGMDEVIDTLMRTFID-PGDEVIIPTPTFSYYEISAKAHGAKPVYAKRE--EDFSLDVD 149 (361)
T ss_pred HHHh------CCCHHHEEEeCCCHHHHHHHHHHHhcC-CCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHH
Confidence 9997 467899999 79999999999999884 99999999999999999999999999998854 35789999
Q ss_pred HHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCC
Q 018147 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (360)
Q Consensus 256 ~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~ 335 (360)
.+++++++ +++++++++|+||||.+++.+++ .++|+++|+++|+||+|.++. +. +.. .....
T Consensus 150 ~l~~~~~~------~~~~v~~~~p~nptG~~~~~~~l---~~l~~~~~~~li~De~y~~~~--~~-~~~---~~~~~--- 211 (361)
T PRK00950 150 SVLNAITE------KTKVIFLCTPNNPTGNLIPEEDI---RKILESTDALVFVDEAYVEFA--EY-DYT---PLALE--- 211 (361)
T ss_pred HHHHHhcc------CCCEEEEeCCCCCCCCCcCHHHH---HHHHHHCCcEEEEECchhhhC--cc-chH---HHHHh---
Confidence 99998865 78999999999999999996554 555677899999999999865 21 122 22221
Q ss_pred CCCCceEEEEeccCcCcc-ccccccC
Q 018147 336 GEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 336 ~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.+ ++|+++||||+|+ +|+|+||
T Consensus 212 --~~-~vi~~~S~SK~~g~~GlRiG~ 234 (361)
T PRK00950 212 --YD-NLIIGRTFSKVFGLAGLRIGY 234 (361)
T ss_pred --cC-CEEEEEeehHhhcCchhhcch
Confidence 12 5899999999997 8999999
No 102
>PRK07908 hypothetical protein; Provisional
Probab=99.96 E-value=1.4e-28 Score=236.99 Aligned_cols=180 Identities=20% Similarity=0.253 Sum_probs=146.7
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEE
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~V 218 (360)
.+|+.+++++.+.+.+ ...|++..|..++|+++|+++ ++++++|++|+|+++++..+++ + .+ +.|
T Consensus 35 ~~~~~~~~~~~~~~~~-----~~~Y~~~~g~~~lr~aia~~~------~~~~~~I~it~Ga~~al~~~~~-l--~~-~~v 99 (349)
T PRK07908 35 TPPEWLRERLAARLGD-----LAAYPSTEDERRARAAVAARH------GRTPDEVLLLAGAAEGFALLAR-L--RP-RRA 99 (349)
T ss_pred CCCHHHHHHHHHHhhH-----hhcCCCccchHHHHHHHHHHh------CcChhhEEECCCHHHHHHHHHh-c--CC-CeE
Confidence 5688888888887754 456999899999999999997 4689999999999999999988 4 36 467
Q ss_pred EEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHH
Q 018147 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (360)
Q Consensus 219 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~l 298 (360)
+++.|+|..+...++..|.+++.++++++ |++|++.++ + ++++++++|||||||.+++.+++ .++
T Consensus 100 iv~~P~y~~~~~~~~~~G~~i~~v~~~~~--~~~d~~~l~----~------~~~~i~l~np~NPTG~~~~~~~l---~~l 164 (349)
T PRK07908 100 AVVHPSFTEPEAALRAAGIPVHRVVLDPP--FRLDPAAVP----D------DADLVVIGNPTNPTSVLHPAEQL---LAL 164 (349)
T ss_pred EEeCCCChHHHHHHHHcCCEEEeeccCcc--cCcChhHhc----c------CCCEEEEcCCCCCCCCCcCHHHH---HHH
Confidence 78899999999999999999999999754 788988552 2 68899999999999999997655 455
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 299 a~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
|+ ++.++|+||+|.+++++ . ..++... . .+ ++|+++||||.|+ +|+|+||
T Consensus 165 ~~-~~~~iIvDe~y~~~~~~-~--~~~l~~~-~------~~-~~i~i~S~SK~~~l~GlRiG~ 215 (349)
T PRK07908 165 RR-PGRILVVDEAFADAVPG-E--PESLAGD-D------LP-GVLVLRSLTKTWSLAGLRVGY 215 (349)
T ss_pred Hh-cCCEEEEECcchhhccC-C--ccccccc-c------CC-CEEEEeecccccCCccceeee
Confidence 55 47889999999997543 2 3343321 1 22 5899999999998 8999998
No 103
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.96 E-value=3.7e-28 Score=232.46 Aligned_cols=156 Identities=21% Similarity=0.252 Sum_probs=129.5
Q ss_pred CCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEe
Q 018147 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPY 242 (360)
Q Consensus 163 Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v 242 (360)
|+.. ..+||+++++++ | +++|++|+|++++|.+++. + .+||+|++++|+|+.|...++.+|++++.+
T Consensus 47 yp~~--~~~Lr~~ia~~~----~----~~~I~it~Gs~~al~~~~~--~-~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v 113 (330)
T PRK05664 47 LPET--DDGLEAAARAYY----G----APQLLPVAGSQAAIQALPR--L-RAPGRVGVLSPCYAEHAHAWRRAGHQVREL 113 (330)
T ss_pred CCCC--hHHHHHHHHHHh----C----CCCEEECcCHHHHHHHHHH--c-cCCCEEEEcCCChHHHHHHHHHcCCeEEEe
Confidence 6553 389999999997 2 4799999999999998863 4 499999999999999999999999999998
Q ss_pred ecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCC
Q 018147 243 YLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKK 322 (360)
Q Consensus 243 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~ 322 (360)
+++ +++++++ ++++++++|||||||.+++.+++++|+++|++++++||+||+|.++. .
T Consensus 114 ~~~----------~~~~~~~-------~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~--~--- 171 (330)
T PRK05664 114 DEA----------EVEAALD-------SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNT--P--- 171 (330)
T ss_pred chh----------hHhhhhc-------CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCC--C---
Confidence 753 3444442 57889999999999999999999999999999999999999998753 2
Q ss_pred CCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 323 ~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
..++.... .++ ++|+++||||+|+ +|+|+||
T Consensus 172 ~~s~~~~~-----~~~--~vi~~~SfSK~~gl~GlRiG~ 203 (330)
T PRK05664 172 QHSLAACA-----HRP--GLIVLRSFGKFFGLAGARLGF 203 (330)
T ss_pred cccccccc-----cCC--CEEEEeeccccccCCCcceEE
Confidence 22333321 112 5899999999998 9999998
No 104
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=1.5e-27 Score=229.03 Aligned_cols=160 Identities=23% Similarity=0.302 Sum_probs=129.1
Q ss_pred CCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEE
Q 018147 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLV 240 (360)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~ 240 (360)
..|++.. .+||+++|+++ |+. ++++|++|+|++++|..+.. ++ ++|| |+++.|+|+.|...++.+|++++
T Consensus 49 ~~Yp~~~--~~L~~~ia~~~----~~~-~~~~I~i~~Gs~e~i~~l~~-~~-~~g~-v~v~~P~y~~y~~~~~~~g~~~~ 118 (339)
T PRK06959 49 RRLPEDD--DGLAACAARYY----GAP-DAAHVLPVAGSQAAIRALPA-LL-PRGR-VGIAPLAYSEYAPAFARHGHRVV 118 (339)
T ss_pred HhCCCch--HHHHHHHHHHh----CCC-CcccEEECcCHHHHHHHHHH-hc-CCCe-EEEcCCCcHHHHHHHHHCCCEEE
Confidence 3487653 89999999987 332 35899999999999997765 45 4776 89999999999999999999999
Q ss_pred EeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCC
Q 018147 241 PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPE 320 (360)
Q Consensus 241 ~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~ 320 (360)
.++++. +. +.+ .+++++++|||||||.+++.+++++|++.|++++.++|+||+|.++.+.
T Consensus 119 ~v~~~~--------~~----~~~------~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~-- 178 (339)
T PRK06959 119 PLDEAA--------DT----LPA------ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA-- 178 (339)
T ss_pred eecccc--------hh----ccc------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc--
Confidence 987653 11 222 4678999999999999999999999999999999999999999997542
Q ss_pred CCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 321 KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 321 ~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
.++.... .++ ++|+++||||.|+ +|+|+||
T Consensus 179 ---~s~~~~~-----~~~--~vi~l~SfSK~~gl~GlRiGy 209 (339)
T PRK06959 179 ---ASLAAHT-----DRP--GLVVLRSVGKFFGLAGVRAGF 209 (339)
T ss_pred ---ccchhcc-----CCC--CEEEEecChhhcCCcchheEE
Confidence 2332221 123 4899999999998 9999998
No 105
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.95 E-value=5.1e-27 Score=224.53 Aligned_cols=164 Identities=23% Similarity=0.283 Sum_probs=140.0
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeE
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTL 239 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~ 239 (360)
...|++..| +++|+++++++ ++++++|++|+|+++++..+++.+ .+| .|++++|+|..|...++..|.++
T Consensus 41 ~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~G~~~~i~~~~~~l--~~g-~vl~~~p~y~~~~~~~~~~g~~~ 110 (330)
T TIGR01140 41 WARYPDPEY-DELRAAAAAYY------GLPAASVLPVNGAQEAIYLLPRLL--APG-RVLVLAPTYSEYARAWRAAGHEV 110 (330)
T ss_pred HhhCCCccH-HHHHHHHHHHh------CCChhhEEECCCHHHHHHHHHHHh--CCC-eEEEeCCCcHHHHHHHHHcCCEE
Confidence 567888776 99999999987 367899999999999999987765 477 79999999999999999999999
Q ss_pred EEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCC
Q 018147 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (360)
Q Consensus 240 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~ 319 (360)
+.++ |++++++.++ +++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+..
T Consensus 111 ~~~~---------d~~~l~~~~~-------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~ 174 (330)
T TIGR01140 111 VELP---------DLDRLPAALE-------ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDA 174 (330)
T ss_pred EEeC---------CHHHHHhhcc-------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCcc
Confidence 9886 6888888873 57799999999999999999999999999999999999999999976531
Q ss_pred CCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 320 EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 320 ~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
++..... . .+ ++|+++||||.|+ +|+|+||
T Consensus 175 -----~~~~~~~----~-~~-~~i~~~S~SK~~g~~G~R~G~ 205 (330)
T TIGR01140 175 -----SLAPQAA----R-FP-GLVVLRSLTKFFGLAGLRLGF 205 (330)
T ss_pred -----chhhHhc----c-CC-CEEEEEecchhhcCchhhhhh
Confidence 2222211 1 12 5899999999998 8999999
No 106
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.94 E-value=8e-26 Score=224.54 Aligned_cols=201 Identities=19% Similarity=0.236 Sum_probs=162.3
Q ss_pred ccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCC--cCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHH
Q 018147 67 KCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNP--QSLGQQPITFFREVLALCDHPSILDRSETQGLFSADS 144 (360)
Q Consensus 67 ~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p--~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v 144 (360)
.+++.....+..+++++++++ .++|+|++|+| |+.. . .. ...+
T Consensus 15 ~v~~~~~~~~~~~~~~l~~~g---------~~~~~L~~g~p~~D~~t---d----------------------s~-t~a~ 59 (460)
T PRK13238 15 MVEPIRLTTREERERALAEAG---------YNPFLLKSEDVFIDLLT---D----------------------SG-TGAM 59 (460)
T ss_pred eeccccccCHHHHHHHHHHcC---------CCEEeCCCCCCCCCCCC---C----------------------CC-chhh
Confidence 455666667788888887762 48999999999 4410 0 00 1146
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCC
Q 018147 145 IERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ 224 (360)
Q Consensus 145 ~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~ 224 (360)
.+++.+++.. +...|++..|+++||+++++++. .++|++|+|+++|+..++.++++ ||| |++++|.
T Consensus 60 ~~a~~~a~~~----g~~~Y~~~~g~~~Lreaia~~~~--------~~~vv~t~ggt~A~~~~~~all~-pGD-Vii~~p~ 125 (460)
T PRK13238 60 SDRQWAAMMR----GDEAYAGSRSYYRLEDAVKDIFG--------YPYTIPTHQGRAAEQILFPVLIK-KGD-VVPSNYH 125 (460)
T ss_pred hHHHHHHHHh----CCcccCCCCCHHHHHHHHHHHhC--------CCcEEECCCHHHHHHHHHHHhCC-CCC-EEccCCc
Confidence 6666666654 35689999999999999999982 35799999999999999999984 999 9999999
Q ss_pred chHHHHHHHHcCCeEEEeecCCC------CCcC--CCHHHHHHHHHHHHhcCCCccEEEEecCCCCcc-cCCCHHHHHHH
Q 018147 225 YPLYSASIALHGGTLVPYYLDEA------TGWG--LETSEVKKQLEAAKAKGITVRALVVINPGNPTG-QVLAEENQRAI 295 (360)
Q Consensus 225 y~~~~~~~~~~g~~~~~v~~~~~------~~~~--~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG-~~~~~~~l~~i 295 (360)
|..|...++..|++++.+++++. +.|. +|+++|++++++... .++++|++++|+|||| .+++.+++++|
T Consensus 126 ~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~--~~tk~Ivl~~p~NptGG~v~s~~~l~~I 203 (460)
T PRK13238 126 FDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA--ENVPFIVMTITNNSAGGQPVSMANLRAV 203 (460)
T ss_pred ccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCC--CceeEEEEecCCCCCCCcCCCHHHHHHH
Confidence 99999999999999999998642 3455 999999999975210 2699999999999998 99999999999
Q ss_pred HHHHHHcCCEEEEccCC--CCCccC
Q 018147 296 VDFCKKEGLVLLADEVY--QENVYV 318 (360)
Q Consensus 296 ~~la~~~~i~lI~DeaY--~~~~~~ 318 (360)
.++|++||++||+|+++ ...+|.
T Consensus 204 ~~ia~~~gi~li~Daa~~~e~a~f~ 228 (460)
T PRK13238 204 YEIAKKYGIPVVIDAARFAENAYFI 228 (460)
T ss_pred HHHHHHcCCEEEEECcchhhhhhhh
Confidence 99999999999999965 334453
No 107
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=1.8e-25 Score=208.32 Aligned_cols=244 Identities=19% Similarity=0.187 Sum_probs=192.2
Q ss_pred ccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHH
Q 018147 67 KCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIE 146 (360)
Q Consensus 67 ~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~ 146 (360)
+++.++..+|....+.++++ |.+++|||+||-.....+++. --..++
T Consensus 4 ~i~~~p~DpIlgL~e~f~~D--------~R~~KVNLgIGvY~de~Gk~p-------------------------vl~aV~ 50 (396)
T COG1448 4 KIEAAPADPILGLKEAFKAD--------PRPNKVNLGIGVYKDEDGKTP-------------------------VLRAVK 50 (396)
T ss_pred ccccCCCCchhHHHHHHhcC--------CCcCeeeeeeeeeeCCCCCcc-------------------------hhHHHH
Confidence 45566677888888888876 457999999998877544443 223555
Q ss_pred HHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCC---CCCCCE--EEcCChHHHHHHHHHHHcc-CCCCEEEE
Q 018147 147 RAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFP---ADPNDI--FLTDGASPAVHMMMQLLIR-SENDGILC 220 (360)
Q Consensus 147 ~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~---~~~~~I--~~t~Ga~~al~~~~~~l~~-~~gd~Vlv 220 (360)
++.+.+.+.. ....|.+..|.+++++++++++ +|.+ +..++| +=|.|+|.||.+....+.. .+..+|++
T Consensus 51 ~Ae~~l~~~~--~~k~Yl~i~G~~~f~~~~~~ll---FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwi 125 (396)
T COG1448 51 KAEKRLLEQE--KTKNYLPIEGLPEFLEAVQKLL---FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWI 125 (396)
T ss_pred HHHHHhhccc--cccccCCcCCcHHHHHHHHHHh---cCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEe
Confidence 5555555544 3778999999999999999999 5544 455555 5588999999998887753 36678999
Q ss_pred cCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecC--CCCcccCCCHHHHHHHHHH
Q 018147 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP--GNPTGQVLAEENQRAIVDF 298 (360)
Q Consensus 221 ~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P--~NPTG~~~~~~~l~~i~~l 298 (360)
++|+|+++..+++..|.++..||..+..+-.+|.+.+.+.++.+ ...-|+|.|+ |||||..++.++|++|+++
T Consensus 126 s~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a-----~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~ 200 (396)
T COG1448 126 SDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTA-----PEGSVVLLHGCCHNPTGIDPTEEQWQELADL 200 (396)
T ss_pred CCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhC-----CCCCEEEEecCCCCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999877666689999999999875 3334555544 9999999999999999999
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc-ccccc
Q 018147 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFSK 359 (360)
Q Consensus 299 a~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~RvG 359 (360)
.++++++.+.|-+|++|.-+-+++...++.++..+ ..++++.||||.|+- |-|||
T Consensus 201 ~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~------~~~lva~S~SKnfgLYgERVG 256 (396)
T COG1448 201 IKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVG------PELLVASSFSKNFGLYGERVG 256 (396)
T ss_pred HHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhC------CcEEEEehhhhhhhhhhhccc
Confidence 99999999999999996655444555565555432 248999999999986 88888
No 108
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.93 E-value=1.1e-25 Score=211.61 Aligned_cols=198 Identities=23% Similarity=0.263 Sum_probs=162.1
Q ss_pred CCCCCCCCcCcHHHHHHHHHHHH-hhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCC
Q 018147 159 ATGAYSHSQGIKGLRDTIAAGIE-ARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGG 237 (360)
Q Consensus 159 ~~~~Y~~~~G~~~lr~~ia~~l~-~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~ 237 (360)
...+|+++.|+++|+..+.++.. ..+......-+|++|+|.+.++..+++.++ ++||.|++...+|+.....++..|+
T Consensus 92 ~alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~-N~gd~vlie~~ty~~AL~s~~a~gv 170 (472)
T KOG0634|consen 92 RALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLI-NRGDHVLIEEYTYPSALQSMEALGV 170 (472)
T ss_pred hhhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhh-cCCCceEEecccchHHHHhccccCc
Confidence 36789999999999999999665 333333444489999999999999999999 5999999999999999999999999
Q ss_pred eEEEeecCCCCCcCCCHHHHHHHHHHHHhc---CCCccEEEEe-cCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCC
Q 018147 238 TLVPYYLDEATGWGLETSEVKKQLEAAKAK---GITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ 313 (360)
Q Consensus 238 ~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~---g~~~k~iil~-~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~ 313 (360)
++++|+++++ ++++|.|++.+....-. .+++++++.+ +-+||||..++.+..++|.++|++|+++||+||.|.
T Consensus 171 ~~ipv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy 247 (472)
T KOG0634|consen 171 KIIPVKMDQD---GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYY 247 (472)
T ss_pred eEEeccccCC---CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccc
Confidence 9999999877 89999999998764322 3456666655 569999999999999999999999999999999999
Q ss_pred CCccCC-------CCCCCCHHHHH----HhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 314 ENVYVP-------EKKFHSFKKVS----RSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 314 ~~~~~~-------~~~~~s~~~~~----~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
-+.|+. +.+..+-..+. +.....+-++|||...||||.+++|+|+||
T Consensus 248 ~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~ 305 (472)
T KOG0634|consen 248 FLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGW 305 (472)
T ss_pred eeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEE
Confidence 998873 11233322222 222223346699999999999999999999
No 109
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.92 E-value=5.1e-24 Score=203.53 Aligned_cols=204 Identities=28% Similarity=0.437 Sum_probs=162.9
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEE
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~V 218 (360)
..++.++++..+ ..... ....|.+..|..++++.+++++...+|....++++++++|+++++..++.++.. +||+|
T Consensus 11 ~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~-~g~~v 86 (350)
T cd00609 11 PPPPEVLEALAA-AALRA--GLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLN-PGDEV 86 (350)
T ss_pred CCCHHHHHHHHH-Hhhcc--CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCC-CCCEE
Confidence 345555555444 11111 366788999999999999999999888777788999999999999999999984 89999
Q ss_pred EEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHH
Q 018147 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (360)
Q Consensus 219 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~l 298 (360)
+++.|+|..+...++..|.+++.++.+++..+..+.+.++....+ ++++|++++|+||||.+++.+++++|+++
T Consensus 87 l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~------~~~~v~i~~~~~~tG~~~~~~~l~~l~~~ 160 (350)
T cd00609 87 LVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTP------KTKLLYLNNPNNPTGAVLSEEELEELAEL 160 (350)
T ss_pred EEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCc------cceEEEEECCCCCCCcccCHHHHHHHHHH
Confidence 999999999999999999999999998765443333555544433 79999999999999999999999999999
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 299 a~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
|+++|+++|+|++|+.+.+.+.. ..... ... ..+ ..++++|++|.++ +|.|+||
T Consensus 161 ~~~~~~~~ivD~a~~~~~~~~~~--~~~~~---~~~--~~~-~~~~~~s~~K~~~~~g~~~G~ 215 (350)
T cd00609 161 AKKHGILIISDEAYAELVYDGEP--PPALA---LLD--AYE-RVIVLRSFSKTFGLPGLRIGY 215 (350)
T ss_pred HHhCCeEEEEecchhhceeCCcc--ccccc---CcC--ccC-cEEEEeecccccCCcccceEE
Confidence 99999999999999998876542 11000 011 122 4799999999998 8999997
No 110
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.89 E-value=1.5e-21 Score=191.78 Aligned_cols=183 Identities=15% Similarity=0.238 Sum_probs=147.8
Q ss_pred HHHHHHHHHhcCCCCCCcccceeccCCCC--cCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCC
Q 018147 79 IAQRLQQELQTNPGSHSFDEILYCNIGNP--QSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIP 156 (360)
Q Consensus 79 ~a~~~~~~~~~~~~~~p~~~vi~l~iG~p--~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~ 156 (360)
|++++++.+ .+++.|..|+| |++. .. + -..+.+++.+.+...
T Consensus 2 r~~~l~~~g---------~n~~~l~~~~v~iDllt------------------------ds-~-t~ams~~~~~a~~~g- 45 (431)
T cd00617 2 RERALKEAG---------YNVFLLRSEDVYIDLLT------------------------DS-G-TGAMSDYQWAAMMLG- 45 (431)
T ss_pred hHHHHHHcC---------CCEEeCCCCCcCCCCCC------------------------CC-C-cHHHHHHHHHHHHhC-
Confidence 556666652 48999999999 5421 00 0 124455555555542
Q ss_pred CCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcC
Q 018147 157 GRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHG 236 (360)
Q Consensus 157 ~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g 236 (360)
...|+++.|.++|++++++++. .+++++|+|+++|+.+++.++++ |||.| +++|.|..|...+...|
T Consensus 46 ---d~~Y~~~~g~~~Leeaia~~~g--------~~~vv~t~~Gt~Al~la~~al~~-pGD~V-~~~~~f~~~~~~i~~~G 112 (431)
T cd00617 46 ---DEAYAGSKSFYDLEDAVQDLFG--------FKHIIPTHQGRGAENILFSILLK-PGRTV-PSNMHFDTTRGHIEANG 112 (431)
T ss_pred ---CCccCCCCCHHHHHHHHHHHHC--------CCeEEEcCCHHHHHHHHHHHhCC-CCCEE-ccCCcccchHHHHHhCC
Confidence 4469999999999999999982 36799999999999999999985 99988 68999999999999999
Q ss_pred CeEEEeecCCCCC------cC--CCHHHHHHHHHHHHhcCCCccEEEEecCCCCc-ccCCCHHHHHHHHHHHHHcCCEEE
Q 018147 237 GTLVPYYLDEATG------WG--LETSEVKKQLEAAKAKGITVRALVVINPGNPT-GQVLAEENQRAIVDFCKKEGLVLL 307 (360)
Q Consensus 237 ~~~~~v~~~~~~~------~~--~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPT-G~~~~~~~l~~i~~la~~~~i~lI 307 (360)
++++.++++++.+ |. +|+++|++++++.. ..++++|++++|+||+ |.+++.+++++|.++|++||++||
T Consensus 113 a~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~--~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li 190 (431)
T cd00617 113 AVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVG--AENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVV 190 (431)
T ss_pred CEeEEEecccccccccccCCCCCcCHHHHHHHhCccc--CCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 9999999976532 44 99999999997520 0148899999999998 999999999999999999999999
Q ss_pred EccCC
Q 018147 308 ADEVY 312 (360)
Q Consensus 308 ~DeaY 312 (360)
+|++.
T Consensus 191 ~DaAr 195 (431)
T cd00617 191 LDAAR 195 (431)
T ss_pred EEchh
Confidence 99994
No 111
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.88 E-value=2.6e-21 Score=189.06 Aligned_cols=198 Identities=13% Similarity=0.067 Sum_probs=147.3
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEE
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~V 218 (360)
..++.+++++.+.+..... ....|....|..++++++++++.+.+|. +++|++|+| ++++..++.+++ ++||.|
T Consensus 56 ~~~~~i~~a~~~~~~~~~~-~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~tsG-~~a~~~~~~~l~-~~gd~v 129 (397)
T PRK06939 56 ANHPELIAAAKAALDSHGF-GMASVRFICGTQDLHKELEEKLAKFLGT---EDAILYSSC-FDANGGLFETLL-GKEDAI 129 (397)
T ss_pred CCCHHHHHHHHHHHHHcCC-CCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEEcCh-HHHHHHHHHHhC-CCCCEE
Confidence 3478888888888766321 2234444678999999999999988773 377888888 678888888888 599999
Q ss_pred EEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHH
Q 018147 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (360)
Q Consensus 219 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~l 298 (360)
++++|+|+.+...++.+|++++.++. .|++++++.+++....+.++++|++.+.+||||...+ +++|+++
T Consensus 130 i~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~---~~~l~~l 199 (397)
T PRK06939 130 ISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP---LPEICDL 199 (397)
T ss_pred EEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC---HHHHHHH
Confidence 99999999999999999999887753 4789999888754333335777776677999998655 8999999
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 299 a~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
|+++|++||+||+|....+... ....... ..+. ++ ..|+++||||.|+| .|+||
T Consensus 200 a~~~~~~li~De~~~~g~~~~~--~~~~~~~-~~~~---~~-~~i~~~S~sK~~~g-~r~G~ 253 (397)
T PRK06939 200 ADKYDALVMVDDSHAVGFVGEN--GRGTVEH-FGVM---DR-VDIITGTLGKALGG-ASGGY 253 (397)
T ss_pred HHHhCCEEEEECcccccCcCCC--CCCHHHH-cCCC---CC-CcEEEEECHHHhCc-cCceE
Confidence 9999999999999963222221 1111111 1111 22 35899999999965 48998
No 112
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.88 E-value=6.2e-21 Score=186.49 Aligned_cols=191 Identities=18% Similarity=0.157 Sum_probs=143.9
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCc---Cc----HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHc
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQ---GI----KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI 211 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~---G~----~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~ 211 (360)
..++++++++.+.+.+.. .+|+.+. |. .++++++|+++ | .+++++++|+++|+..++.+++
T Consensus 52 ~~~~~v~~~~~~~~~~~~----~~~~~s~~~~G~~~~~~~le~~ia~~~----g----~~~~ii~~~~~~a~~~~~~~l~ 119 (393)
T TIGR01822 52 SSHPDLIQAAKDALDEHG----FGMSSVRFICGTQDIHKELEAKIAAFL----G----TEDTILYASCFDANGGLFETLL 119 (393)
T ss_pred CCCHHHHHHHHHHHHHhC----CCCCCcCcccCChHHHHHHHHHHHHHh----C----CCcEEEECchHHHHHHHHHHhC
Confidence 457889999988887632 2455555 75 77888888877 2 2567888899999999999998
Q ss_pred cCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHH
Q 018147 212 RSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (360)
Q Consensus 212 ~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~ 291 (360)
++||.|+++.|.|+.+...++..+.+.+.++ .+|+++|++++++....+.++++|++.+++||||.+.+
T Consensus 120 -~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~--- 188 (393)
T TIGR01822 120 -GAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP--- 188 (393)
T ss_pred -CCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC---
Confidence 4999999999999999999888888775543 46899999999864333346778888889999999987
Q ss_pred HHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 292 l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
+++|+++|++||+++|+||+|....++.. ..+..... ++ .++ ..+++.|+||.++| .|+||
T Consensus 189 l~~i~~la~~~~~~li~De~~~~g~~~~~--~~~~~~~~-~~---~~~-~di~~~s~sK~l~g-~r~G~ 249 (393)
T TIGR01822 189 LDEICDLADKYDALVMVDECHATGFLGPT--GRGSHELC-GV---MGR-VDIITGTLGKALGG-ASGGF 249 (393)
T ss_pred HHHHHHHHHHcCCEEEEECCccccCcCCC--CCchHHhc-CC---CCC-CeEEEEEChHHhhC-CCcEE
Confidence 89999999999999999999964333221 22222211 11 123 35889999999864 68997
No 113
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=2.2e-21 Score=174.94 Aligned_cols=242 Identities=20% Similarity=0.288 Sum_probs=163.8
Q ss_pred cchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHH
Q 018147 70 YAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAW 149 (360)
Q Consensus 70 ~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~ 149 (360)
++.+|+-.++-.-+.+.+.+-...+..+.+|.++.|||-..+.. -++|++. ..
T Consensus 3 fs~fGdkft~~sGi~~lMdDl~d~Lrt~g~imLggGNPa~iPem-~~~f~~~--------------------------~a 55 (417)
T COG3977 3 FSLFGDKFTRHSGITQLMDDLNDGLRTPGAIMLGGGNPARIPEM-DDYFQDL--------------------------LA 55 (417)
T ss_pred hhhhhHHhhhhhhHHHHHHHHHhhccCCCceeeCCCCcccChhH-HHHHHHH--------------------------HH
Confidence 44455544443333322222222344567999999999973210 1111111 12
Q ss_pred HHHHcC-CCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccC--CC--CEEEEc-CC
Q 018147 150 QILDQI-PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS--EN--DGILCP-IP 223 (360)
Q Consensus 150 ~~l~~~-~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~--~g--d~Vlv~-~P 223 (360)
+.+.+. .......|..++|...|.++++++++++|||++++++|.+|+|++.+.+.++..|... .| ..|++| .|
T Consensus 56 emla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaP 135 (417)
T COG3977 56 EMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAP 135 (417)
T ss_pred HHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccCh
Confidence 222222 1123678999999999999999999999999999999999999999999999988531 23 346665 48
Q ss_pred CchHHHHHHHHcCCeEEE----eecCCCC--CcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHH
Q 018147 224 QYPLYSASIALHGGTLVP----YYLDEAT--GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (360)
Q Consensus 224 ~y~~~~~~~~~~g~~~~~----v~~~~~~--~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~ 297 (360)
.|.+|..+.-.-. ..+. +.+.+.+ .|.+|.++|.- .+ .+.+|+++.|.||||.+++.+|+.+|.+
T Consensus 136 eYiGY~d~~l~~d-~fVs~kP~iel~~~g~FKY~vDF~~l~i--~e------~~g~ic~SRPtNPTGNVlTdeE~~klda 206 (417)
T COG3977 136 EYIGYADAGLEED-LFVSAKPNIELLPAGQFKYHVDFEHLHI--GE------STGAICVSRPTNPTGNVLTDEELAKLDA 206 (417)
T ss_pred hhccccccccCcc-ceeeccCCcccccccceeeccCHHHccc--cc------ccceEEecCCCCCCCCcccHHHHHHHHH
Confidence 9988876432211 1222 2233333 45678877753 23 6889999999999999999999999999
Q ss_pred HHHHcCCEEEEccCCCCCccCCCCCCCCHH--HHHHhhCCCCCCceEEEEeccCcCcccccccc
Q 018147 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFK--KVSRSMGYGEKDISLVSFQSVSKGRYFHFFSK 359 (360)
Q Consensus 298 la~~~~i~lI~DeaY~~~~~~~~~~~~s~~--~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvG 359 (360)
+|++||+.+|+|.+|+. +|+.+. ...+-. .+ ++|.|.|+||.=-+|.|+|
T Consensus 207 lA~~~giPliIDnAYg~-------PFP~iifsd~~~~w----~~-NiilC~SLSK~GLPG~R~G 258 (417)
T COG3977 207 LARQHGIPLIIDNAYGV-------PFPGIIFSDATPLW----NE-NIILCMSLSKLGLPGSRCG 258 (417)
T ss_pred HhhhcCCcEEEecccCC-------CCCceecccccccC----CC-CEEEEeehhhcCCCCccee
Confidence 99999999999999986 222211 111111 12 6899999999877888887
No 114
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.86 E-value=4.7e-20 Score=178.50 Aligned_cols=195 Identities=14% Similarity=0.073 Sum_probs=146.9
Q ss_pred CCCHHHHHHHHHHHHcCCCCCC-C---CCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCC
Q 018147 139 LFSADSIERAWQILDQIPGRAT-G---AYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE 214 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~-~---~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~ 214 (360)
.+.+++++++.+.......... . .+....-..++++.+|+++ | + +++++|+|+++++..++..++. +
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~--~~i~~~~g~t~al~~~l~~~~~-~ 82 (361)
T cd06452 12 RLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL----G--M--DEARVTPGAREGKFAVMHSLCE-K 82 (361)
T ss_pred CCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc----C--C--ceEEEeCCHHHHHHHHHHHhcC-C
Confidence 5577888887776632211001 1 1111122567888888876 4 3 7899999999999999999984 9
Q ss_pred CCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc-CCCccEEEEecCCCCcccCCCHHHHH
Q 018147 215 NDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK-GITVRALVVINPGNPTGQVLAEENQR 293 (360)
Q Consensus 215 gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-g~~~k~iil~~P~NPTG~~~~~~~l~ 293 (360)
||+|+++.+.|......++..|++++.++.+.+++|.+|++++++++++..+. +.++++|++++|+||||.+.+ ++
T Consensus 83 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~~ 159 (361)
T cd06452 83 GDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---AK 159 (361)
T ss_pred CCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---HH
Confidence 99999999988776677888999999999987656899999999999753221 236889999999999998866 88
Q ss_pred HHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 294 ~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
+|+++|+++|+++|+|++|..... ..+.. +++ ..+++.|+||.++++.|+||
T Consensus 160 ~i~~~~~~~~~~vivD~a~~~g~~-----~~~~~----~~~------~d~~~~s~~K~l~~~~~~G~ 211 (361)
T cd06452 160 KIAKVCHEYGVPLLLNGAYTVGRM-----PVSGK----ELG------ADFIVGSGHKSMAASAPIGV 211 (361)
T ss_pred HHHHHHHHcCCeEEEECCcccCCc-----CCCHH----HcC------CCEEEecCCccccCCCCeEE
Confidence 999999999999999999984211 11111 111 24899999999988889997
No 115
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.86 E-value=3.2e-20 Score=181.88 Aligned_cols=187 Identities=16% Similarity=0.095 Sum_probs=140.8
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCC-------CcCcHHHHHHHHHHHHhhcCCCC-CCCCEEEcCChHHHHHHHHHHH
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSH-------SQGIKGLRDTIAAGIEARDGFPA-DPNDIFLTDGASPAVHMMMQLL 210 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~-------~~G~~~lr~~ia~~l~~~~g~~~-~~~~I~~t~Ga~~al~~~~~~l 210 (360)
..|+.+++++.+.+..... ...+.. ...+.++|+.+|+++ ++ ++++|++|+|++++++.++.++
T Consensus 27 ~~p~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~i~~t~g~t~~l~~~~~~~ 98 (398)
T TIGR03392 27 LKPQAVIDATQQFYRLSSG--TVHRSQHQQAQSLTARYELARQQVARFL------NAPDAENIVWTRGTTESINLVAQSY 98 (398)
T ss_pred CCCHHHHHHHHHHHHhcCC--CCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCCeEEEeCChHHHHHHHHHHh
Confidence 4678888888887764321 111221 123566888888887 33 4789999999999999999988
Q ss_pred c---cCCCCEEEEcCCCchH----HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCc
Q 018147 211 I---RSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT 283 (360)
Q Consensus 211 ~---~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPT 283 (360)
. .++||+|++++|.|+. +...++..|++++.++++.+ +.+|++++++++++ ++++|++++|+|||
T Consensus 99 ~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~i~~------~t~lv~i~~~~n~t 170 (398)
T TIGR03392 99 ARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGAD--LLPDIRQLPELLTP------RTRILALGQMSNVT 170 (398)
T ss_pred hhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCC--CCcCHHHHHHHhcc------CceEEEEECccccc
Confidence 3 1489999999999865 55667888999999998754 57899999999976 79999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 284 GQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 284 G~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
|.+++ +++|+++|+++|+++|+|++|....+. ..+. .+. .| +++.|.+|.+++. ++||
T Consensus 171 G~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~~-----~~~~----~~~---~d---~~~~s~~K~~gp~-G~G~ 228 (398)
T TIGR03392 171 GGCPD---LARAITLAHQYGAVVVVDGAQGVVHGP-----PDVQ----ALD---ID---FYAFSGHKLYGPT-GIGV 228 (398)
T ss_pred cccCC---HHHHHHHHHHcCCEEEEEhhhhcCCCC-----CChh----hcC---CC---EEEEecccccCCC-ceEE
Confidence 99998 888999999999999999999753221 1111 111 23 6677888977652 4675
No 116
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.86 E-value=4.7e-20 Score=179.73 Aligned_cols=195 Identities=14% Similarity=0.125 Sum_probs=147.4
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEE
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~V 218 (360)
..++.+++++.+.+.+... ....|....|..++++++++++.+.+|. ++.|++++|+ +++..++..++ ++||.|
T Consensus 47 ~~~~~~~~a~~~~~~~~~~-~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~~sG~-~a~~~a~~~~~-~~gd~v 120 (385)
T TIGR01825 47 ADHPRLKEAAAQAIQQYGV-GAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVFQSGF-NTNQGVLSALL-RKGDIV 120 (385)
T ss_pred CCCHHHHHHHHHHHHHcCC-CCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEECcHH-HHHHHHHHHhC-CCCCEE
Confidence 3578888888888775432 2456888899999999999999988772 4668888885 56667888888 499999
Q ss_pred EEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHH
Q 018147 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (360)
Q Consensus 219 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~l 298 (360)
+++.|+|+.+...+...|.+++.++ .+|++++++.+++.. .+++++|++.+++||||.+.+ +++|.++
T Consensus 121 i~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~--~~~~~~v~~~~v~~~tG~~~~---~~~i~~l 188 (385)
T TIGR01825 121 LSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENP--SYGKKLIVTDGVFSMDGDVAP---LPEIVEL 188 (385)
T ss_pred EEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhc--cCCCeEEEEecCCcCCCCccC---HHHHHHH
Confidence 9999999999888888888877653 568888988886531 125778888888999999988 8899999
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 299 a~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
|++||+++|+||+|..+.++... ....... .+ .++ .++++.||||+|++ +.||
T Consensus 189 ~~~~~~~li~De~~~~~~~~~~~-~~~~~~~--~~---~~~-~~i~~~s~sK~~~~--~gG~ 241 (385)
T TIGR01825 189 AERYGAVTYVDDAHGSGVMGEAG-RGTVHHF--GL---EDK-VDIQVGTLSKAIGV--VGGY 241 (385)
T ss_pred HHHhCCEEEEECcccccCcCCCC-CccHhhc--CC---CcC-CcEEEEeccHHhhc--CCCE
Confidence 99999999999999887665321 1111111 11 133 57899999999853 3355
No 117
>PRK07049 methionine gamma-lyase; Validated
Probab=99.85 E-value=2.5e-20 Score=183.96 Aligned_cols=168 Identities=20% Similarity=0.219 Sum_probs=131.1
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHH----HHc
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALH 235 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~----~~~ 235 (360)
...|+.+. ...|++.+|++. | .+++++++|+++|+..++.+++. +||.|+++.|.|+.|...+ ...
T Consensus 77 y~R~~~Pt-~~~Le~~lA~le----g----~~~~iv~~sG~~Ai~~~l~al~~-~Gd~Vv~~~p~Y~~~~~~~~~~l~~~ 146 (427)
T PRK07049 77 YSRFNHPN-SEIVEDRLAVYE----G----AESAALFSSGMSAIATTLLAFVR-PGDVILHSQPLYGGTETLLAKTFRNF 146 (427)
T ss_pred ccCCCCcC-HHHHHHHHHHHh----C----CCcEEEEccHHHHHHHHHHHHhC-CCCEEEEcCCCcccHHHHHHHHHHhc
Confidence 35677665 689999999986 2 45788899999999999999995 9999999999999997654 557
Q ss_pred CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHH---cCCEEEEccCC
Q 018147 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK---EGLVLLADEVY 312 (360)
Q Consensus 236 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~---~~i~lI~DeaY 312 (360)
|++++.++. ..|.+.+++++.+..++ .++|+|++++|+||||.+++.+++.+|++.|++ +++++|+||+|
T Consensus 147 Gi~~v~~~~------~~d~~~l~~~l~~~~~~-~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety 219 (427)
T PRK07049 147 GVGAVGFAD------GLSEAAIGAAAEAAAAK-GRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTL 219 (427)
T ss_pred CcEEEEEeC------CCCHHHHHHHHHhhccC-CCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCc
Confidence 988777752 34678888877643221 268999999999999999998888888888654 68999999998
Q ss_pred CCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc--ccccccC
Q 018147 313 QENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY--FHFFSKW 360 (360)
Q Consensus 313 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~--g~~RvGw 360 (360)
....+.. ++ . . . ..|+++||||.|+ +|+|+||
T Consensus 220 ~~~~~~~-----pl----~-~----g--~divv~S~SK~~gG~~glr~G~ 253 (427)
T PRK07049 220 LGPVFQK-----PL----E-H----G--ADLSVYSLTKYVGGHSDLVAGA 253 (427)
T ss_pred cccccCC-----cc----c-c----C--CCEEEEcCceeecCCCCcEEEE
Confidence 7643321 11 1 1 1 2488899999999 5999997
No 118
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.85 E-value=1.2e-19 Score=174.64 Aligned_cols=187 Identities=16% Similarity=0.155 Sum_probs=134.2
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcC----cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCC
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQG----IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN 215 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G----~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~g 215 (360)
.|+++++++.+.+.+.+. ....|....| ..++++++++++ | .+++|++++|+.+.+ .++..++ .+|
T Consensus 31 ~~~~v~~a~~~~~~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~----~---~~~~i~~~~G~~~~~-~~l~~~~-~~g 100 (360)
T TIGR00858 31 SHPEVIQAAQQGAEQYGA-GSTASRLVSGNSPLHEELEEELAEWK----G---TEAALLFSSGYLANV-GVISALV-GKG 100 (360)
T ss_pred CCHHHHHHHHHHHHhcCC-CCCCcCcccCCcHHHHHHHHHHHHHh----C---CCCEEEECchHHHHH-HHHHHhC-CCC
Confidence 368899999888876332 1222332333 345666666665 3 356788888865555 5677777 499
Q ss_pred CEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHH
Q 018147 216 DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (360)
Q Consensus 216 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i 295 (360)
|.|+++.|+|+.+...++..|++++.++. +|++.|++.++.. .+.++++|++.+++||||...+ +++|
T Consensus 101 d~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~--~~~~~~~v~~~~~~~~~G~~~~---~~~i 168 (360)
T TIGR00858 101 DLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKN--RGERRKLIVTDGVFSMDGDIAP---LPQL 168 (360)
T ss_pred CEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHc--ccCCCeEEEEeCCccCCCCCcC---HHHH
Confidence 99999999999999999999999887752 5789999988652 1124677888899999998887 8899
Q ss_pred HHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 296 ~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
.++|+++|+++|+||+|..+.++.. ..+..... .+. ++.++|+++||||+|++
T Consensus 169 ~~l~~~~~~~li~De~~~~~~~~~~--~~~~~~~~-~~~---~~~~~i~i~s~sK~~~~ 221 (360)
T TIGR00858 169 VALAERYGAWLMVDDAHGTGVLGED--GRGTLEHF-GLK---PEPVDIQVGTLSKALGS 221 (360)
T ss_pred HHHHHHcCcEEEEECcccccCcCCC--CCchHHhc-CCC---ccCCcEEEEechhhhhc
Confidence 9999999999999999987666542 22222221 111 12257999999999876
No 119
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=1.3e-21 Score=173.33 Aligned_cols=172 Identities=21% Similarity=0.384 Sum_probs=141.4
Q ss_pred CCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCC-CEEEEcCCCchHHHHHHHHcCCeEE
Q 018147 162 AYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGTLV 240 (360)
Q Consensus 162 ~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~g-d~Vlv~~P~y~~~~~~~~~~g~~~~ 240 (360)
.|+..+ ...++.+++.- .+.++++|++..|+.+.|..+++..| .|| ++|+...|+|..|.--+...++.++
T Consensus 65 ~~~d~r-nk~ls~a~~~d------kpLt~dnic~GvGsDE~ID~iiR~~c-~PGkeKIl~cPPtysMY~v~A~iNd~eVv 136 (375)
T KOG0633|consen 65 VYPDPR-NKRLSDALAQD------KPLTSDNICVGVGSDELIDLIIRCVC-DPGKEKILDCPPTYSMYVVDAAINDAEVV 136 (375)
T ss_pred ccCCcc-cchhhhhcccC------CCCCccceEEecCcHHHHHHHHhhee-cCCccceeecCCcceeEEEEeecCCceEE
Confidence 455544 45566555442 36889999999999999999999999 598 8999999999999988888999999
Q ss_pred EeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCC
Q 018147 241 PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPE 320 (360)
Q Consensus 241 ~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~ 320 (360)
.+|+..+ |.+|.|.+.+.++.. ..+|.+++++|+||||..+..+++++|.+.-. |.++++||+|-+| .+.
T Consensus 137 kvpl~pd--F~lnvdai~evl~~d----s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidF--sg~ 206 (375)
T KOG0633|consen 137 KVPLNPD--FSLNVDAIAEVLELD----SKIKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDF--SGV 206 (375)
T ss_pred EecCCCC--ccccHHHHHHHHhcc----ccceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEee--ccc
Confidence 9999874 999999999988752 36899999999999999999999999987543 7899999999995 442
Q ss_pred CCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc-cccccC
Q 018147 321 KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFSKW 360 (360)
Q Consensus 321 ~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~RvGw 360 (360)
. |-.+++. .||| +|++++|||+|+- |+||||
T Consensus 207 ~---S~~~lV~----kYpN--LivlqTlSKsfGLAGiRvG~ 238 (375)
T KOG0633|consen 207 E---SRMKLVK----KYPN--LIVLQTLSKSFGLAGIRVGY 238 (375)
T ss_pred c---ccchHhH----hCCc--eeehhhhhhhcCcceeEeec
Confidence 1 2223333 4676 7999999999985 999997
No 120
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.85 E-value=9.5e-20 Score=178.74 Aligned_cols=184 Identities=16% Similarity=0.173 Sum_probs=138.1
Q ss_pred CCCHHHHHHHHHHHHcCCCC-CCCCCCC----CcCcHHHHHHHHHHHHhhcCCCC-CCCCEEEcCChHHHHHHHHHHHc-
Q 018147 139 LFSADSIERAWQILDQIPGR-ATGAYSH----SQGIKGLRDTIAAGIEARDGFPA-DPNDIFLTDGASPAVHMMMQLLI- 211 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~-~~~~Y~~----~~G~~~lr~~ia~~l~~~~g~~~-~~~~I~~t~Ga~~al~~~~~~l~- 211 (360)
..|..+++++.+.+.+.... ....+.. ...+.++|+.+|+++ | + ++++|++|+|++++++.+++++.
T Consensus 30 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~~i~~~~~~t~~i~~~~~~~~~ 103 (401)
T PRK10874 30 LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL----N--APDAKNIVWTRGTTESINLVAQSYAR 103 (401)
T ss_pred CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHc----C--CCCCCEEEEECCHHHHHHHHHHHhhh
Confidence 45778888888877653210 0011111 122557777777776 3 4 68899999999999999999983
Q ss_pred --cCCCCEEEEcCCCchH----HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCccc
Q 018147 212 --RSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (360)
Q Consensus 212 --~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~ 285 (360)
..+||+|++++|.|+. +...++..|++++.++++. ++.+|++++++++++ ++++|++++|+||||.
T Consensus 104 ~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~------~t~lv~i~~~~n~tG~ 175 (401)
T PRK10874 104 PRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA--DRLPDVDLLPELITP------RTRILALGQMSNVTGG 175 (401)
T ss_pred ccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC--CCcCCHHHHHHhcCc------CcEEEEEeCCcccccC
Confidence 1489999999999864 5566788899999999865 357899999999976 7999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 286 ~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
+++ +++|+++|+++|+++|+|++|....+. ..+. .++ .| +++.|++|.|++
T Consensus 176 ~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~~-----~~~~----~~~---~d---~~~~s~~K~~gp 226 (401)
T PRK10874 176 CPD---LARAITLAHQAGMVVMVDGAQGAVHFP-----ADVQ----ALD---ID---FYAFSGHKLYGP 226 (401)
T ss_pred cCC---HHHHHHHHHHcCCEEEEECCccccccc-----CCch----hcC---CC---EEEEecccccCC
Confidence 998 889999999999999999999642221 1111 111 23 677999997765
No 121
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.83 E-value=2.7e-19 Score=175.20 Aligned_cols=188 Identities=17% Similarity=0.203 Sum_probs=138.6
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCc----HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH---c
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGI----KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL---I 211 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~----~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l---~ 211 (360)
.+|+.+++++.+.+..........|....+. .++|+.+++++ | +++++|++++|+++++..++.++ .
T Consensus 28 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~----~--~~~~~v~~~~~~t~~l~~~~~~~~~~~ 101 (397)
T TIGR01976 28 QIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLL----N--ADPPEVVFGANATSLTFLLSRAISRRW 101 (397)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHc----C--CCCCeEEEeCCHHHHHHHHHHHHHhcC
Confidence 4688899988888765422112346554443 46666666665 4 45567999999999998888776 4
Q ss_pred cCCCCEEEEcCCCchHH----HHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCC
Q 018147 212 RSENDGILCPIPQYPLY----SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (360)
Q Consensus 212 ~~~gd~Vlv~~P~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~ 287 (360)
++||+|+++.|.|+.. ...++..|++++.++++++ ++.+|++++++++++ ++++|++++|+||||.+.
T Consensus 102 -~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~ 173 (397)
T TIGR01976 102 -GPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSP------RTRLVAVTAASNTLGSIV 173 (397)
T ss_pred -CCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCC------CceEEEEeCCCCCCCccC
Confidence 5999999999988654 3456778999999998753 357899999999876 789999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 288 AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 288 ~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
+ +++|+++|+++|+++|+|+++.. +.. ...+. .++ .| +++.|++|.++ .|+||
T Consensus 174 ~---~~~i~~~~~~~~~~~ivD~a~~~----~~~-~~~~~----~~~---~d---~~~~s~~K~~g--~~~G~ 226 (397)
T TIGR01976 174 D---LAAITELVHAAGALVVVDAVHYA----PHG-LIDVQ----ATG---AD---FLTCSAYKFFG--PHMGI 226 (397)
T ss_pred C---HHHHHHHHHHcCCEEEEehhhhc----ccc-CCCHH----HcC---CC---EEEEechhhcC--CceEE
Confidence 8 89999999999999999999743 111 11111 111 23 55689999874 46775
No 122
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.83 E-value=6.6e-19 Score=172.13 Aligned_cols=196 Identities=13% Similarity=0.095 Sum_probs=149.5
Q ss_pred CCCCHHHHHHHHHHHHcCCC----CCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccC
Q 018147 138 GLFSADSIERAWQILDQIPG----RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS 213 (360)
Q Consensus 138 ~~~p~~v~~~~~~~l~~~~~----~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~ 213 (360)
.++++.+++++.+....... .+...+.....+.++|+.+|+++ | .+++++++|+++++..++.+++.
T Consensus 30 ~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~----g----~~~~~~~~g~t~a~~~al~~l~~- 100 (387)
T PRK09331 30 GILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL----G----MDEARVTHGAREGKFAVMHSLCK- 100 (387)
T ss_pred CCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHhcC-
Confidence 35688888888887744221 01222333335788888898887 3 25688899999999999999984
Q ss_pred CCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHh-cCCCccEEEEecCCCCcccCCCHHHH
Q 018147 214 ENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA-KGITVRALVVINPGNPTGQVLAEENQ 292 (360)
Q Consensus 214 ~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~-~g~~~k~iil~~P~NPTG~~~~~~~l 292 (360)
+||.|+++.+.|......++..|++++.++.+.+.++.+|++.+++++++..+ .++++++|++++|+||||.+.+ +
T Consensus 101 ~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~---l 177 (387)
T PRK09331 101 KGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD---A 177 (387)
T ss_pred CCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc---H
Confidence 99999999999888777788999999999984333568999999999975321 2246899999999999998877 9
Q ss_pred HHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 293 RAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 293 ~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
++|+++|+++|+++|+|++|..-.. ..+.. .++ .| +++.|++|.++++.|+||
T Consensus 178 ~~I~~la~~~g~~livD~a~~~g~~-----~~~~~----~~g---~D---~~~~s~~K~l~~~~~~G~ 230 (387)
T PRK09331 178 KKVAKVAHEYGIPFLLNGAYTVGRM-----PVDGK----KLG---AD---FIVGSGHKSMAASAPSGV 230 (387)
T ss_pred HHHHHHHHHcCCEEEEECCcccCCc-----CCCHH----HcC---CC---EEEeeCcccccCCCCEEE
Confidence 9999999999999999999985221 11111 111 13 788999999988888886
No 123
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.83 E-value=1.1e-18 Score=169.64 Aligned_cols=165 Identities=15% Similarity=0.118 Sum_probs=130.0
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCC
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT 248 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~ 248 (360)
...+++.+|+++ | .+.+++++|+++++..++.+++ ++||.|++..+.|......++..|++++.++.++++
T Consensus 53 ~~~~~e~lA~~~----g----~~~~~i~~g~~~a~~~~~~~l~-~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~ 123 (370)
T TIGR02539 53 IHDFLEDLAEFL----G----MDEARVTHGAREGKFAVMHALC-KEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHP 123 (370)
T ss_pred HHHHHHHHHHHh----C----CCceEEECChHHHHHHHHHHhh-CCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcc
Confidence 456777777776 3 2467779999999999999998 499999999888655446788999999999987666
Q ss_pred CcCCCHHHHHHHHHHHHhc-CCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHH
Q 018147 249 GWGLETSEVKKQLEAAKAK-GITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFK 327 (360)
Q Consensus 249 ~~~~d~~~L~~~i~~~~~~-g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~ 327 (360)
+|.+|+++|++++++..++ ..++++|++++|+||||...+ +++|+++|+++|+++|+||+|...... .+..
T Consensus 124 ~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~~-----~~~~ 195 (370)
T TIGR02539 124 EYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRMP-----VSAK 195 (370)
T ss_pred cCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCcC-----CCHH
Confidence 7899999999999753221 125789999999999999888 888899999999999999999974221 1111
Q ss_pred HHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 328 KVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
. . ..| ++++|+||.|+++.|+||
T Consensus 196 ~----~---~~d---i~v~s~sK~~~~~g~~G~ 218 (370)
T TIGR02539 196 E----I---GAD---FIVGSGHKSMAASGPCGV 218 (370)
T ss_pred H----c---CCC---EEEeeCcccccCCCCEEE
Confidence 1 1 123 667999999998888997
No 124
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.83 E-value=3.9e-19 Score=174.02 Aligned_cols=200 Identities=17% Similarity=0.119 Sum_probs=146.8
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCC-----CcCcHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSH-----SQGIKG 171 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~-----~~G~~~ 171 (360)
..++++++|+|+. ..|+.+.+.+.+. . ....|.+ ..|.++
T Consensus 20 ~~~~~l~~g~~~~-----------------------------~~p~~~~~~~~~~--~----~~~~~~~~~~~~~~g~~~ 64 (398)
T cd00613 20 QSMSFLGSGTYKH-----------------------------NPPAVIKRNILEN--E----FYTAYTPYQPEISQGRLQ 64 (398)
T ss_pred cCcccccccccCC-----------------------------cCcHHHHHHhccc--c----CcccCCCCChhhhhhHHH
Confidence 3679999999997 2344444334333 2 1334555 789999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCEEEcCCh-HHHHHHHHHHHccCC--CCEEEEcCCCchHHHHHHHHcC----CeEEEeec
Q 018147 172 LRDTIAAGIEARDGFPADPNDIFLTDGA-SPAVHMMMQLLIRSE--NDGILCPIPQYPLYSASIALHG----GTLVPYYL 244 (360)
Q Consensus 172 lr~~ia~~l~~~~g~~~~~~~I~~t~Ga-~~al~~~~~~l~~~~--gd~Vlv~~P~y~~~~~~~~~~g----~~~~~v~~ 244 (360)
+++++++++.+.+|. +.+++++++++ +++...++.++. .+ ||+|++++|.|+.+...+...| ++++.+++
T Consensus 65 ~~~~~~~~la~~~g~--~~~~v~~~~~g~~~~~~~~~~~~~-~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~ 141 (398)
T cd00613 65 ALFELQTMLCELTGM--DVANASLQDEATAAAEAAGLAAIR-AYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPS 141 (398)
T ss_pred HHHHHHHHHHHHHCC--CccceeccCchHHHHHHHHHHHHh-cccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEecc
Confidence 999999999998874 44577777644 455455555555 35 9999999999999998888887 89998888
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~ 324 (360)
+++ +.+|++++++++.+ ++++|++++|+ |||.+. +.+++|.++|+++|+++|+|+++........
T Consensus 142 ~~~--~~~d~~~l~~~i~~------~t~~viv~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~~~~---- 206 (398)
T cd00613 142 DEG--GTVDLEALKEEVSE------EVAALMVQYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTGLKP---- 206 (398)
T ss_pred CCC--CCcCHHHHHHhcCC------CeEEEEEECCC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccCCCC----
Confidence 643 47899999998865 79999999985 899984 4569999999999999999998754221111
Q ss_pred CHHHHHHhhCCCCCCceEEEEeccCcCcc----ccccccC
Q 018147 325 SFKKVSRSMGYGEKDISLVSFQSVSKGRY----FHFFSKW 360 (360)
Q Consensus 325 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~----g~~RvGw 360 (360)
. ..++ . -+++.|++|.+. ||.|+||
T Consensus 207 -~----~~~~---~---d~~~~s~~K~~~p~g~Ggp~~g~ 235 (398)
T cd00613 207 -P----GEYG---A---DIVVGNLQKTGVPHGGGGPGAGF 235 (398)
T ss_pred -h----HHcC---C---CEEEeeccccCCCCCCCCCceeE
Confidence 0 0111 2 388999999873 3678876
No 125
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.83 E-value=1.4e-19 Score=173.10 Aligned_cols=190 Identities=15% Similarity=0.111 Sum_probs=140.2
Q ss_pred cCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCC
Q 018147 136 TQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN 215 (360)
Q Consensus 136 ~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~g 215 (360)
++.++|+.+++++.+.+.. ...|.+..+..++++.+++++ | ++++++++|+++++..+++.++ ++|
T Consensus 6 ~~~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~~a~~~----g----~~~~~~~~~gt~a~~~~~~~l~-~~g 71 (338)
T cd06502 6 TVTGPTPEMLEAMAAANVG-----DDVYGEDPTTAKLEARAAELF----G----KEAALFVPSGTAANQLALAAHT-QPG 71 (338)
T ss_pred cCCCCCHHHHHHHHhcccC-----CcccCCCHHHHHHHHHHHHHh----C----CCeEEEecCchHHHHHHHHHhc-CCC
Confidence 3678899999988775432 235666666777887777776 3 5678888888899999999998 599
Q ss_pred CEEEEcCCCchHHHH---HHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc-CCCccEEEEecCCCCcccCCCHHH
Q 018147 216 DGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK-GITVRALVVINPGNPTGQVLAEEN 291 (360)
Q Consensus 216 d~Vlv~~P~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-g~~~k~iil~~P~NPTG~~~~~~~ 291 (360)
|+|+++.|+|..+.. .....|++++.++.+. +.+|+++|++++++..++ ..++++|+++||+|| |.+++.++
T Consensus 72 d~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~ 147 (338)
T cd06502 72 GSVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN---GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDE 147 (338)
T ss_pred CeEEEecCcceeeecCCcHHHHcCceEEeecCCC---CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHH
Confidence 999999999876432 3455899999998743 579999999998742111 125889999999997 67779999
Q ss_pred HHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc
Q 018147 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY 353 (360)
Q Consensus 292 l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 353 (360)
+++|+++|+++|+++|+||+|..+..... ..++..... ..+ +++.|+||.|+
T Consensus 148 l~~i~~~~~~~~~~livDea~~~~~~~~~--~~~~~~~~~-----~~d---~~~~s~sK~~~ 199 (338)
T cd06502 148 LKAISALAKENGLPLHLDGARLANAAAAL--GVALKTYKS-----GVD---SVSFCLSKGGG 199 (338)
T ss_pred HHHHHHHHHHcCCeEeechHHHHHHHHhc--CCCHHHHHh-----cCC---EEEEeccccCC
Confidence 99999999999999999999865322111 112222211 123 45779999986
No 126
>PRK10534 L-threonine aldolase; Provisional
Probab=99.83 E-value=9.9e-20 Score=174.16 Aligned_cols=165 Identities=16% Similarity=0.162 Sum_probs=124.0
Q ss_pred ccccCcc--CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHH
Q 018147 130 ILDRSET--QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMM 207 (360)
Q Consensus 130 ~l~~~~~--~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~ 207 (360)
|+|+++| +. +++.+++++.+... ....|++..+..+|++++|+++ | + +.+++++|+++++.+++
T Consensus 1 ~~~~~~~~~~~-p~~~~~~a~~~~~~-----~~~~Y~~~~~~~~L~~~la~~~----g--~--~~~~v~~~g~~a~~~~l 66 (333)
T PRK10534 1 MIDLRSDTVTR-PSRAMLEAMMAAPV-----GDDVYGDDPTVNALQDYAAELS----G--K--EAALFLPTGTQANLVAL 66 (333)
T ss_pred CcccccccCCC-CCHHHHHHHHhccC-----CCcccCCCHHHHHHHHHHHHHh----C--C--CeEEEeCchHHHHHHHH
Confidence 4566666 55 78888888765332 2457877777999999999997 3 2 44567777888888888
Q ss_pred HHHccCCCCEEEEcCCCchH-HHHH-HHHcC-CeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcc
Q 018147 208 QLLIRSENDGILCPIPQYPL-YSAS-IALHG-GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (360)
Q Consensus 208 ~~l~~~~gd~Vlv~~P~y~~-~~~~-~~~~g-~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG 284 (360)
..++ .+||+|+++.|+|.. |... ....| ++++.+++++ +|.+|+++|++++++...++.++++|+++||+ ||
T Consensus 67 ~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G 141 (333)
T PRK10534 67 LSHC-ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAA--DGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NG 141 (333)
T ss_pred HHhc-CCCCeeEEechhhhhHhcCCchHHhcCceEEeecCCC--CCCCCHHHHHHhhcccCcCcccceEEEEecCC--CC
Confidence 8887 499999999888853 4321 23444 6777777653 48999999999886421111247899999776 59
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccCCC
Q 018147 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQ 313 (360)
Q Consensus 285 ~~~~~~~l~~i~~la~~~~i~lI~DeaY~ 313 (360)
.+++.+++++|+++|+++++++|+||+|.
T Consensus 142 ~v~~~~~l~~i~~~~~~~~~~lvvDEA~~ 170 (333)
T PRK10534 142 KVLPREYLKQAWEFTRERNLALHVDGARI 170 (333)
T ss_pred eecCHHHHHHHHHHHHHcCCeEEeeHHHH
Confidence 99999999999999999999999999986
No 127
>PLN02721 threonine aldolase
Probab=99.82 E-value=2.6e-19 Score=172.28 Aligned_cols=160 Identities=11% Similarity=0.065 Sum_probs=115.6
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEE
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGIL 219 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vl 219 (360)
+++.+.+++.+. .... ....|.+. ..+|++++++++.. +.++++++++++...++..++..+||+|+
T Consensus 18 ~~~~~~~a~~~~--~~~~-~~~~~~~~--~~~l~~~la~~~~~--------~~~~~~~~Gs~a~~~~l~~~~~~~gd~Vl 84 (353)
T PLN02721 18 PTDAMRAAMANA--EVDD-DVLGYDPT--ALRLEEEMAKIFGK--------EAALFVPSGTMGNLISVLVHCDVRGSEVI 84 (353)
T ss_pred CCHHHHHHHHhc--cCCC-cccCCCHH--HHHHHHHHHHHhCC--------ceeEEecCccHHHHHHHHHHccCCCCeEE
Confidence 355566665432 1111 23334333 78999999999832 23455555566666777776622899999
Q ss_pred EcCCCchHHHH---HHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcC-CCccEEEEecC-CCCcccCCCHHHHHH
Q 018147 220 CPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG-ITVRALVVINP-GNPTGQVLAEENQRA 294 (360)
Q Consensus 220 v~~P~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g-~~~k~iil~~P-~NPTG~~~~~~~l~~ 294 (360)
+++|+|..... .+...|++++.++.+++ +.+|++.+++++++...++ +++++|+++++ +||||.+++.+++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~ 162 (353)
T PLN02721 85 LGDNSHIHLYENGGISTLGGVHPRTVKNNED--GTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDK 162 (353)
T ss_pred EcCccceehhcccchhhhcCceeEecCCCcC--CCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHH
Confidence 99999854333 56778999999987643 5789999999997421111 36889999864 889999999999999
Q ss_pred HHHHHHHcCCEEEEccCCCC
Q 018147 295 IVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 295 i~~la~~~~i~lI~DeaY~~ 314 (360)
|+++|+++|+++|+|++|..
T Consensus 163 l~~l~~~~g~~livD~a~~~ 182 (353)
T PLN02721 163 VGELAKRHGLKLHIDGARIF 182 (353)
T ss_pred HHHHHHHcCCEEEEEchhhh
Confidence 99999999999999999853
No 128
>PLN02242 methionine gamma-lyase
Probab=99.82 E-value=2e-19 Score=177.05 Aligned_cols=151 Identities=18% Similarity=0.162 Sum_probs=121.2
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHH-----HHcCCeEEEee
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI-----ALHGGTLVPYY 243 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~-----~~~g~~~~~v~ 243 (360)
..+|++.+|+++ | .+.+++++|+++|+..++.++++ +||+|+++.|.|+.+...+ +..|++++.++
T Consensus 78 ~~~LE~~lA~l~----g----~~~~l~~~sG~~Ai~~al~al~~-~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d 148 (418)
T PLN02242 78 VLNLGRQMAALE----G----TEAAYCTASGMSAISSVLLQLCS-SGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVD 148 (418)
T ss_pred HHHHHHHHHHHh----C----CCeEEEEccHHHHHHHHHHHHhC-CCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcC
Confidence 677888888876 2 35678999999999999999985 9999999999999887665 34687777665
Q ss_pred cCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCC
Q 018147 244 LDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKF 323 (360)
Q Consensus 244 ~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~ 323 (360)
. .|++++++++++. ++|+|++++|+||||.+.+ +++|+++|+++|++||+|++|..+.+...
T Consensus 149 ~-------~d~e~l~~~i~~~-----~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~~~--- 210 (418)
T PLN02242 149 I-------TDLEAVKKAVVPG-----KTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLSPA--- 210 (418)
T ss_pred C-------CCHHHHHHhcCcC-----CCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCCHH---
Confidence 3 2789999988651 3899999999999999987 89999999999999999999987655221
Q ss_pred CCHHHHHHhhCCCCCCceEEEEeccCcCccc-ccc-ccC
Q 018147 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFF-SKW 360 (360)
Q Consensus 324 ~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~R-vGw 360 (360)
.++ ..|+++||||.|+| |.| .||
T Consensus 211 --------~~g------~divv~S~SK~l~g~g~~~gG~ 235 (418)
T PLN02242 211 --------RLG------ADVVVHSISKFISGGADIIAGA 235 (418)
T ss_pred --------HcC------CcEEEEeCccccCCCCCceEEE
Confidence 111 24889999999976 555 465
No 129
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.82 E-value=7.5e-19 Score=172.75 Aligned_cols=198 Identities=12% Similarity=0.080 Sum_probs=142.6
Q ss_pred ccccCcc-CCCCCHHHHHHHHHHHHcCCCC-CCCCCCC----CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 018147 130 ILDRSET-QGLFSADSIERAWQILDQIPGR-ATGAYSH----SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (360)
Q Consensus 130 ~l~~~~~-~~~~p~~v~~~~~~~l~~~~~~-~~~~Y~~----~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al 203 (360)
++.|+.+ ....|..+++++.+.+...... ....|.. ..-..++|+.+|+++ |. .++++|++|+|+++++
T Consensus 24 ~iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~-~~~~~v~~t~g~t~~l 98 (406)
T PRK09295 24 LAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFI----NA-RSAEELVFVRGTTEGI 98 (406)
T ss_pred eEEEeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHc----Cc-CCCCeEEEeCCHHHHH
Confidence 3444444 3346788889888877653210 0111210 122557777888776 31 2578999999999999
Q ss_pred HHHHHHH----ccCCCCEEEEcCCCchH----HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEE
Q 018147 204 HMMMQLL----IRSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALV 275 (360)
Q Consensus 204 ~~~~~~l----~~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~ii 275 (360)
+.+++++ + .+||+|+++.+.|++ |...++..|++++.++++.+ +.+|+++|++++++ ++++|+
T Consensus 99 ~~~~~~~~~~~~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~i~~------~t~lv~ 169 (406)
T PRK09295 99 NLVANSWGNSNV-RAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPD--GTLQLETLPALFDE------RTRLLA 169 (406)
T ss_pred HHHHHHhhhhcC-CCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCC--CCCCHHHHHHhcCC------CcEEEE
Confidence 9998874 4 489999999988763 45566778999999998754 47899999999876 799999
Q ss_pred EecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcccc
Q 018147 276 VINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFH 355 (360)
Q Consensus 276 l~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~ 355 (360)
+++|+||||.+++ +++|+++|+++|+++|+|++|..... ...+. .++ .| +++.|++|.+++.
T Consensus 170 l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~~-----~~~~~----~~~---~D---~~~~s~~K~~gp~ 231 (406)
T PRK09295 170 ITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMHH-----PVDVQ----ALD---CD---FYVFSGHKLYGPT 231 (406)
T ss_pred EecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCcc-----ccCch----hcC---CC---EEEeehhhccCCC
Confidence 9999999999999 88899999999999999999975322 11111 111 23 7789999976652
Q ss_pred ccccC
Q 018147 356 FFSKW 360 (360)
Q Consensus 356 ~RvGw 360 (360)
.+||
T Consensus 232 -G~G~ 235 (406)
T PRK09295 232 -GIGI 235 (406)
T ss_pred -CcEE
Confidence 3665
No 130
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.82 E-value=1e-18 Score=167.73 Aligned_cols=201 Identities=17% Similarity=0.168 Sum_probs=135.6
Q ss_pred ccccCcc---CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHH
Q 018147 130 ILDRSET---QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMM 206 (360)
Q Consensus 130 ~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~ 206 (360)
+++|+.+ ...-|+++++++.+.+++... ....|....|....++.+.+.+.+.+|. ++ .++++++++++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~la~~~~~---~~-~iv~~sg~~a~~~~ 77 (349)
T cd06454 3 VLNFCSNDYLGLANHPEVIEAAKEALDKYGV-GAGGSRLISGTSDLHEELEEELAEFHGK---EA-ALVFSSGYAANDGV 77 (349)
T ss_pred ceecccCCccccCCCHHHHHHHHHHHHHhCC-CCCCcCeecCCchHHHHHHHHHHHHhCC---CC-EEEeccHHHHHHHH
Confidence 3455555 223368899999998876322 1223333334444444444444444442 23 45555557788888
Q ss_pred HHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccC
Q 018147 207 MQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (360)
Q Consensus 207 ~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~ 286 (360)
+.+++ ++||.|+++.|+|+.+...++..|++++.++ .+|.+.+++.+++.. ...+++++++++|+||||..
T Consensus 78 ~~~~~-~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~-------~~~~~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~ 148 (349)
T cd06454 78 LSTLA-GKGDLIISDSLNHASIIDGIRLSGAKKRIFK-------HNDMEDLEKLLREAR-RPYGKKLIVTEGVYSMDGDI 148 (349)
T ss_pred HHHhc-CCCCEEEEehhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHHhh-ccCCCeEEEEeccccCCCCc
Confidence 88888 4999999999999999888899999998775 247788888887532 11256788888999999998
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 287 ~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
.+ +++|+++|+++|+++|+|++|....+... ...+... . .. .....+++.|+||.|++
T Consensus 149 ~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~--~~~~~~~-~-~~---~~~~~i~~~s~sK~~~~ 206 (349)
T cd06454 149 AP---LPELVDLAKKYGAILFVDEAHSVGVYGPH--GRGVEEF-G-GL---TDDVDIIMGTLGKAFGA 206 (349)
T ss_pred cC---HHHHHHHHHHcCCEEEEEccccccccCCC--CCChhhh-c-cc---cccCcEEEeechhhhcc
Confidence 77 88999999999999999999975433321 1111111 1 00 11146899999999875
No 131
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.82 E-value=7.6e-19 Score=168.54 Aligned_cols=187 Identities=14% Similarity=0.106 Sum_probs=148.5
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccC-----------C--CCEEEEcCCCch
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-----------E--NDGILCPIPQYP 226 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~-----------~--gd~Vlv~~P~y~ 226 (360)
...|....+..++++++++++.+.+|.+.+++++++|+|+++++..++.+++.. + ++.|+++.+.|.
T Consensus 27 ~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~ 106 (345)
T cd06450 27 DFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHV 106 (345)
T ss_pred CcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchh
Confidence 345888889999999999999999887655678999999999999999887520 2 347889999999
Q ss_pred HHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEE
Q 018147 227 LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL 306 (360)
Q Consensus 227 ~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~l 306 (360)
.+...++..|.+++.++++++ +.+|+++|++++++...++.+++++++++|+||||.+.+ +++|+++|+++|+++
T Consensus 107 ~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~l 181 (345)
T cd06450 107 SVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP---LEEIADLAEKYDLWL 181 (345)
T ss_pred HHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC---HHHHHHHHHHhCCeE
Confidence 999999989999999998765 389999999999876566667888999999999999866 899999999999999
Q ss_pred EEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 307 LADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 307 I~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
++|++|..+.+.... .... .. ..+++ ..+..|++|.+++..++||
T Consensus 182 ~vD~a~~~~~~~~~~-~~~~---~~----~~~~~-d~~~~s~~K~l~~p~g~g~ 226 (345)
T cd06450 182 HVDAAYGGFLLPFPE-PRHL---DF----GIERV-DSISVDPHKYGLVPLGCSA 226 (345)
T ss_pred EEechhhHHHhhChh-hHHH---hc----Ccccc-CEEEEchhHhhCCCcchHH
Confidence 999999987653221 1000 01 11221 2456799998877777775
No 132
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.81 E-value=1.5e-19 Score=165.75 Aligned_cols=254 Identities=17% Similarity=0.160 Sum_probs=190.3
Q ss_pred ccChhhhccccchhchHHHHHHHHHHHHhcCCCCCCcccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCC
Q 018147 60 SLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGL 139 (360)
Q Consensus 60 ~~~~~~~~~~~~~~~~i~~~a~~~~~~~~~~~~~~p~~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~ 139 (360)
.++.....++.++-.+|....+.++++ |..+.|||++|.......+|. .
T Consensus 23 ~~~s~~s~V~maPpDpILGVTeAfk~D--------~n~~KiNLgvGaYRdd~gKp~-----------------------v 71 (427)
T KOG1411|consen 23 RASSWWSHVEMAPPDPILGVTEAFKKD--------PNPKKINLGVGAYRDDNGKPY-----------------------V 71 (427)
T ss_pred cccchhhcCCCCCCCCcccHHHHHhcC--------CCcceeeecccceecCCCCee-----------------------e
Confidence 334455566666677888888888776 557899999999999777776 2
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEE--cCChHHHHHHHHHHHcc-CCCC
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL--TDGASPAVHMMMQLLIR-SEND 216 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~--t~Ga~~al~~~~~~l~~-~~gd 216 (360)
+| +++++.+.+.... ....|.|..|++++.+..++++.......+..++|+. |-++|.++......+.. -++.
T Consensus 72 L~--~VrkAE~ql~~~~--ldKEYlpI~Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~ 147 (427)
T KOG1411|consen 72 LP--SVRKAEQQLASLS--LDKEYLPITGLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSR 147 (427)
T ss_pred eH--HHHHHHHHHhhhc--ccchhccccchHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhcccc
Confidence 22 5555555444433 3568999999999999999999543333355556655 34667777766555432 3789
Q ss_pred EEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecC--CCCcccCCCHHHHHH
Q 018147 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP--GNPTGQVLAEENQRA 294 (360)
Q Consensus 217 ~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P--~NPTG~~~~~~~l~~ 294 (360)
.|++|+|+|.++.+.+..+|+.+..|......+-++|.+.+.+.+.++ ....++|.+. |||||+..+.++|++
T Consensus 148 ~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~-----p~gs~ilLhaCaHNPTGvDPt~eqw~k 222 (427)
T KOG1411|consen 148 DIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEA-----PEGSIILLHACAHNPTGVDPTKEQWEK 222 (427)
T ss_pred ceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcC-----CCCcEEEeehhhcCCCCCCccHHHHHH
Confidence 999999999999999999999998887766667799999998888774 4445666654 999999999999999
Q ss_pred HHHHHHHcCCEEEEccCCCCCccCCC-CCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc-ccccc
Q 018147 295 IVDFCKKEGLVLLADEVYQENVYVPE-KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFSK 359 (360)
Q Consensus 295 i~~la~~~~i~lI~DeaY~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~RvG 359 (360)
|.++.++++.+.+.|.+|++|..++- .+..+++-++. .+..+++++||.|.++- |=|||
T Consensus 223 i~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~------~g~~~~laQSyAKNMGLYgERvG 283 (427)
T KOG1411|consen 223 ISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVE------DGHEILLAQSYAKNMGLYGERVG 283 (427)
T ss_pred HHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHH------cCCceEeehhhhhhcchhhhccc
Confidence 99999999999999999999877652 23444544444 23478999999997653 44555
No 133
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.81 E-value=4.9e-19 Score=173.65 Aligned_cols=155 Identities=15% Similarity=0.156 Sum_probs=125.1
Q ss_pred CCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHH----HHHHcCCeEE
Q 018147 165 HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHGGTLV 240 (360)
Q Consensus 165 ~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~ 240 (360)
+..+..+|++++|+++ | .+++++++|+++|+..++..++. +||+|+++.|.|+.+.. .++..|++++
T Consensus 62 ~~p~~~~Le~~iA~~~----g----~~~~l~~~sG~~Ai~~al~~ll~-~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~ 132 (400)
T PRK06234 62 GNPTSTEVENKLALLE----G----GEAAVVAASGMGAISSSLWSALK-AGDHVVASDTLYGCTFALLNHGLTRYGVEVT 132 (400)
T ss_pred CCccHHHHHHHHHHHh----C----CCcEEEEcCHHHHHHHHHHHHhC-CCCEEEEecCccchHHHHHHHHHhhCCeEEE
Confidence 4556899999999997 2 24678899999999999988884 99999999998876543 4567899998
Q ss_pred EeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHc--CCEEEEccCCCCCccC
Q 018147 241 PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE--GLVLLADEVYQENVYV 318 (360)
Q Consensus 241 ~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~--~i~lI~DeaY~~~~~~ 318 (360)
.++.. |++++++++++ ++++|++++|+||||.+.+ +++|+++|+++ |+++|+|++|....+.
T Consensus 133 ~vd~~-------d~e~l~~~i~~------~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~ 196 (400)
T PRK06234 133 FVDTS-------NLEEVRNALKA------NTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ 196 (400)
T ss_pred EECCC-------CHHHHHHHhcc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC
Confidence 88643 78999999876 7999999999999999998 88889999997 9999999999886543
Q ss_pred CCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc-cccc-cC
Q 018147 319 PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFS-KW 360 (360)
Q Consensus 319 ~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~Rv-Gw 360 (360)
.. + +.+ .-|+++|+||.++| |.|+ ||
T Consensus 197 ~~-----l-----~~g------~Divv~S~sK~l~g~g~~~gG~ 224 (400)
T PRK06234 197 RP-----L-----QLG------ADVVVHSATKYLNGHGDVIAGF 224 (400)
T ss_pred Cc-----h-----hhC------CcEEEeeccccccCCCCceeEE
Confidence 21 1 111 23899999999976 6554 76
No 134
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.81 E-value=8e-19 Score=159.04 Aligned_cols=226 Identities=15% Similarity=0.170 Sum_probs=173.1
Q ss_pred ccceeccCCCCcCCCCCChhHHHHHHhhcCCCCccccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHH
Q 018147 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (360)
Q Consensus 97 ~~vi~l~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (360)
+..+||++|.......+|+ .+| ++++....+.+... ..+.|.|..|++.++.+.
T Consensus 30 p~KvnL~igAYRtd~g~PW-----------------------vLP--vVk~~e~~i~~d~s-~NHEYLpi~Gl~~F~~~A 83 (410)
T KOG1412|consen 30 PVKVNLGIGAYRTDDGKPW-----------------------VLP--VVKKAEKKIANDQS-LNHEYLPILGLPTFTKAA 83 (410)
T ss_pred cceeecccceEEcCCCCee-----------------------Eeh--hhhhhhhhccCchh-ccchhccccCchhhhhhh
Confidence 5789999999998777776 334 66666555555443 577899999999999999
Q ss_pred HHHHHhhcCCCCCCCCEE--EcCChHHHHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHcC-CeEEEeecCCCCCcCC
Q 018147 177 AAGIEARDGFPADPNDIF--LTDGASPAVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHG-GTLVPYYLDEATGWGL 252 (360)
Q Consensus 177 a~~l~~~~g~~~~~~~I~--~t~Ga~~al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~g-~~~~~v~~~~~~~~~~ 252 (360)
++.+.......+..++++ -+-++++|+.+....|.. -+..+|++..|+|.++..+++..| .++..|+.-+.++-.+
T Consensus 84 ~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~ 163 (410)
T KOG1412|consen 84 TELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCV 163 (410)
T ss_pred HHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCcee
Confidence 999866655556677653 345667777766554421 145679999999999999999999 6677787766666689
Q ss_pred CHHHHHHHHHHHHhcCCCccEEEEecC--CCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCC-CCCCCHHHH
Q 018147 253 ETSEVKKQLEAAKAKGITVRALVVINP--GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPE-KKFHSFKKV 329 (360)
Q Consensus 253 d~~~L~~~i~~~~~~g~~~k~iil~~P--~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~-~~~~s~~~~ 329 (360)
|++.+...|+.+ ..+.|++.+. |||||...++|+|.+|+++.++++++.+.|-+|++|..++. .+...++.+
T Consensus 164 d~e~~Lsdl~~A-----Pe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~f 238 (410)
T KOG1412|consen 164 DLEGFLSDLESA-----PEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYF 238 (410)
T ss_pred cHHHHHHHHhhC-----CCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHH
Confidence 999999999885 5566666643 99999999999999999999999999999999999877663 234445555
Q ss_pred HHhhCCCCCCceEEEEeccCcCccc-ccccc
Q 018147 330 SRSMGYGEKDISLVSFQSVSKGRYF-HFFSK 359 (360)
Q Consensus 330 ~~~~~~~~~~~~~i~~~S~SK~~~g-~~RvG 359 (360)
+. .+..+++++||+|.|+- +=|+|
T Consensus 239 V~------~g~e~fv~QSFaKNfGlYneRvG 263 (410)
T KOG1412|consen 239 VE------QGFELFVCQSFAKNFGLYNERVG 263 (410)
T ss_pred Hh------cCCeEEEEhhhhhhccccccccc
Confidence 44 23368999999998764 55666
No 135
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.81 E-value=6.9e-19 Score=171.46 Aligned_cols=159 Identities=15% Similarity=0.180 Sum_probs=123.0
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHH----c
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----H 235 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~----~ 235 (360)
...|+.+. ...|++.+|++. | .+++++++|+++|+..++.+++. +||+|+++.|+|..+...+.. .
T Consensus 45 Y~R~~~p~-~~~le~~lA~l~----g----~~~v~~~~gg~~Ai~~~l~all~-~GD~Vl~~~p~y~~~~~~~~~~~~~~ 114 (382)
T TIGR02080 45 YSRSGNPT-RDLLQQALAELE----G----GAGAVVTNTGMSAIHLVTTALLG-PDDLLVAPHDCYGGTYRLLNALAKKG 114 (382)
T ss_pred ccCCCCch-HHHHHHHHHHHh----C----CCcEEEEcCHHHHHHHHHHHHcC-CCCEEEEcCCCcHHHHHHHHHHHhhc
Confidence 45666655 678888888876 2 46899999999999999999984 999999999999865443322 2
Q ss_pred CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 018147 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (360)
Q Consensus 236 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~ 315 (360)
|.++..++ ..|++++++++++ ++|+|++++|+||||.+++ +++|+++|+++|+++|+|++|...
T Consensus 115 ~~~v~~~d-------~~d~~~l~~ai~~------~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~ 178 (382)
T TIGR02080 115 CFRVLFVD-------QGDEQALRAALAQ------KPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSP 178 (382)
T ss_pred CeEEEEEC-------CCCHHHHHHhcCc------CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCccc
Confidence 44554432 2378999998876 7999999999999999998 788899999999999999999875
Q ss_pred ccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc--cccccC
Q 018147 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF--HFFSKW 360 (360)
Q Consensus 316 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g--~~RvGw 360 (360)
.+.. ++ .++ .+ |+++|+||.++| |+|.||
T Consensus 179 ~~~~-----pl-----~~g---aD---ivv~S~sK~l~G~~~~~~G~ 209 (382)
T TIGR02080 179 ALQN-----PL-----ALG---AD---LVLHSCTKYLNGHSDVIAGA 209 (382)
T ss_pred ccCC-----ch-----hhC---CC---EEEeecceeccCCCCceeEE
Confidence 4321 11 111 23 788999998864 778875
No 136
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.80 E-value=2.7e-18 Score=168.43 Aligned_cols=184 Identities=15% Similarity=0.126 Sum_probs=136.9
Q ss_pred CCCHHHHHHHHHHHHcCCCC-CCCCCC----CCcCcHHHHHHHHHHHHhhcCCCCC-CCCEEEcCChHHHHHHHHHHHc-
Q 018147 139 LFSADSIERAWQILDQIPGR-ATGAYS----HSQGIKGLRDTIAAGIEARDGFPAD-PNDIFLTDGASPAVHMMMQLLI- 211 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~-~~~~Y~----~~~G~~~lr~~ia~~l~~~~g~~~~-~~~I~~t~Ga~~al~~~~~~l~- 211 (360)
.+|..+++++.+.+.+.... ....+. ...+++++|+.+++++ +++ +++|++|+|+++++..++.++.
T Consensus 29 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------~~~~~~~v~~~~g~t~~l~~~~~~~~~ 102 (403)
T TIGR01979 29 QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFI------NAASDEEIVFTRGTTESINLVAYSWGD 102 (403)
T ss_pred CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CcCCCCeEEEeCCHHHHHHHHHHHhhh
Confidence 45788888887776643210 011111 1224668888888887 334 6799999999999999988751
Q ss_pred --cCCCCEEEEcCCCchH----HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCccc
Q 018147 212 --RSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (360)
Q Consensus 212 --~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~ 285 (360)
.++||+|+++++.|+. +...++..|++++.++++++ +.+|++++++++++ +++++++++|+||||.
T Consensus 103 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~i~~------~~~lv~~~~~~~~tG~ 174 (403)
T TIGR01979 103 SNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDD--GTLDLDDLEKLLTE------KTKLVAITHVSNVLGT 174 (403)
T ss_pred hcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCC--CCCCHHHHHHHhcc------CCeEEEEEcccccccc
Confidence 1489999999998765 34566678999999998743 57899999999976 7999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 286 ~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
+++ +++|.++|+++|+++|+|++|..... ...+. .++ . .+++.|++|.+++
T Consensus 175 ~~~---~~~i~~~~~~~~~~~ivD~a~~~g~~-----~~~~~----~~~---~---d~~~~s~~K~~gp 225 (403)
T TIGR01979 175 VNP---VEEIAKLAHQVGAKVLVDGAQAVPHM-----PVDVQ----ALD---C---DFYVFSGHKMYGP 225 (403)
T ss_pred cCC---HHHHHHHHHHcCCEEEEEchhhcCcc-----ccCcc----ccC---C---CEEEEecccccCC
Confidence 999 88899999999999999999975321 11111 111 2 3788999997764
No 137
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.80 E-value=1.3e-18 Score=170.12 Aligned_cols=151 Identities=15% Similarity=0.179 Sum_probs=121.1
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHH----HHHHHcCCeEEEeec
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS----ASIALHGGTLVPYYL 244 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~----~~~~~~g~~~~~v~~ 244 (360)
..++++.+|+++ | .+++++++|+++|+..++.+++. +||+|+++.+.|.+.. ..+...|++++.+++
T Consensus 63 ~~~le~~la~l~----g----~~~~v~~ssG~~Ai~~al~al~~-~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 133 (390)
T PRK08133 63 VTMFQERLAALE----G----AEACVATASGMAAILAVVMALLQ-AGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL 133 (390)
T ss_pred HHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhC-CCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC
Confidence 667888888776 3 35789999999999999998884 9999999999887543 455678999998875
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~ 324 (360)
+ |++++++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+..
T Consensus 134 ~-------d~~~l~~~i~~------~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~----- 192 (390)
T PRK08133 134 T-------DLDAWRAAVRP------NTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQ----- 192 (390)
T ss_pred C-------CHHHHHHhcCc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCC-----
Confidence 3 68889988876 7999999999999999997 8999999999999999999997643321
Q ss_pred CHHHHHHhhCCCCCCceEEEEeccCcCccc-cccccC
Q 018147 325 SFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFSKW 360 (360)
Q Consensus 325 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~RvGw 360 (360)
++ .++ .| ++++|+||.++| |.|+||
T Consensus 193 pl-----~~g---~D---ivv~S~sK~~~g~g~~~GG 218 (390)
T PRK08133 193 PL-----KLG---AD---VVIHSATKYLDGQGRVLGG 218 (390)
T ss_pred ch-----hhC---Cc---EEEeecceeecCCcceEeE
Confidence 11 111 23 789999999976 777753
No 138
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.80 E-value=1.4e-18 Score=168.65 Aligned_cols=189 Identities=16% Similarity=0.145 Sum_probs=139.9
Q ss_pred CCCHHHHHHHHHHHHcCCCC---CCCCCCC--CcCcHHHHHHHHHHHHhhcCCCCC-CCCEEEcCChHHHHHHHHHHHcc
Q 018147 139 LFSADSIERAWQILDQIPGR---ATGAYSH--SQGIKGLRDTIAAGIEARDGFPAD-PNDIFLTDGASPAVHMMMQLLIR 212 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~---~~~~Y~~--~~G~~~lr~~ia~~l~~~~g~~~~-~~~I~~t~Ga~~al~~~~~~l~~ 212 (360)
.+|+.+++++.+.+.+.... +...+++ ..+..++|+.+++++ | ++ +++|++|+|+++++..++.++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~~~v~~~~g~t~a~~~~~~~l~~ 83 (373)
T cd06453 10 QKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFI----N--APSPDEIIFTRNTTEAINLVAYGLGR 83 (373)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHh----C--CCCCCeEEEeCCHHHHHHHHHHHhhh
Confidence 45788888888877543210 0111111 234566777777776 3 34 67999999999999999999874
Q ss_pred C--CCCEEEEcCCCchHH----HHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccC
Q 018147 213 S--ENDGILCPIPQYPLY----SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (360)
Q Consensus 213 ~--~gd~Vlv~~P~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~ 286 (360)
. +||+|+++++.|+.. ...++..|++++.++++.+ +.+|++++++.+.+ ++++|++++|+||||.+
T Consensus 84 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~------~~~~v~~~~~~~~tG~~ 155 (373)
T cd06453 84 ANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDD--GQLDLEALEKLLTE------RTKLVAVTHVSNVLGTI 155 (373)
T ss_pred cCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCC--CCcCHHHHHHHhcC------CceEEEEeCcccccCCc
Confidence 3 899999999999874 3345577999999998743 57999999999976 78999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 287 ~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
.+ +++|+++|+++|+++|+|++|...... ..+. ..+ .| +++.|+.|.+++ .++||
T Consensus 156 ~~---~~~i~~~~~~~~~~li~D~a~~~~~~~-----~~~~----~~~---~d---~~~~s~~K~~~~-~g~g~ 210 (373)
T cd06453 156 NP---VKEIGEIAHEAGVPVLVDGAQSAGHMP-----VDVQ----DLG---CD---FLAFSGHKMLGP-TGIGV 210 (373)
T ss_pred CC---HHHHHHHHHHcCCEEEEEhhhhcCcee-----eecc----ccC---CC---EEEeccccccCC-CCcEE
Confidence 98 788999999999999999998742211 1111 111 23 556788899987 77775
No 139
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.80 E-value=3.6e-18 Score=168.84 Aligned_cols=188 Identities=16% Similarity=0.160 Sum_probs=137.9
Q ss_pred CCCHHHHHHHHHHHHcCCCC-CC-CCCCC---CcCcHHHHHHHHHHHHhhcCCCC-CCCCEEEcCChHHHHHHHHHHH--
Q 018147 139 LFSADSIERAWQILDQIPGR-AT-GAYSH---SQGIKGLRDTIAAGIEARDGFPA-DPNDIFLTDGASPAVHMMMQLL-- 210 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~-~~-~~Y~~---~~G~~~lr~~ia~~l~~~~g~~~-~~~~I~~t~Ga~~al~~~~~~l-- 210 (360)
..|..+++++.+.+.+.... .. ..|.. ...+.++|+.+++++ ++ ++++|++|+|++++++.+++.+
T Consensus 43 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~~v~~t~g~t~al~~i~~~~~~ 116 (424)
T PLN02855 43 QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFI------NASTSREIVFTRNATEAINLVAYTWGL 116 (424)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHc------CCCCCCEEEEeCCHHHHHHHHHHHhhh
Confidence 35788888888877654220 01 11111 123468888888887 33 3579999999999999998864
Q ss_pred --ccCCCCEEEEcCCCchH----HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcc
Q 018147 211 --IRSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (360)
Q Consensus 211 --~~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG 284 (360)
+ .+||+|+++.+.|+. |...++..|++++.++++.+. .+|++++++++++ ++++|++++|+||||
T Consensus 117 ~~~-~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~--~~~~~~l~~~i~~------~t~lv~i~~~~n~tG 187 (424)
T PLN02855 117 ANL-KPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDE--VLDVEQLKELLSE------KTKLVATHHVSNVLG 187 (424)
T ss_pred hcC-CCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCC--CcCHHHHHHHhcc------CceEEEEeCcccccc
Confidence 4 489999999997764 455667789999999987553 6899999999976 799999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 285 ~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
.+++ +++|+++|+++|+++|+|++|.. +.. ...+. .++ .| +++.|++|.+++. .+||
T Consensus 188 ~~~~---~~~I~~l~~~~g~~vivD~a~~~----g~~-~~~~~----~~~---~d---~~~~s~~K~~gp~-G~G~ 244 (424)
T PLN02855 188 SILP---VEDIVHWAHAVGAKVLVDACQSV----PHM-PVDVQ----TLG---AD---FLVASSHKMCGPT-GIGF 244 (424)
T ss_pred ccCC---HHHHHHHHHHcCCEEEEEhhhhc----CCc-CCCch----hcC---CC---EEEeecccccCCC-ccEE
Confidence 9999 78889999999999999999953 111 11111 111 23 6799999966542 4665
No 140
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.79 E-value=2.7e-18 Score=165.61 Aligned_cols=193 Identities=14% Similarity=0.069 Sum_probs=139.3
Q ss_pred ccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHc
Q 018147 132 DRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI 211 (360)
Q Consensus 132 ~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~ 211 (360)
+|..++...|+.+++++.+.+. ...|. +..++.+.+.+.+.+.+|.+ .++.+++++|+++++..++.+++
T Consensus 2 ~~~~~~~~~~~~v~~a~~~~~~------~~~~~---~~~~~~~~~~~~la~~~g~~-~~~~~~~~~~~t~al~~~~~~~~ 71 (356)
T cd06451 2 LLIPGPSNVPPRVLKAMNRPML------GHRSP---EFLALMDEILEGLRYVFQTE-NGLTFLLSGSGTGAMEAALSNLL 71 (356)
T ss_pred cccCCCcCCCHHHHHHhCCCcc------CCCCH---HHHHHHHHHHHHHHHHhcCC-CCCEEEEecCcHHHHHHHHHHhC
Confidence 4566677788888888754321 11222 23333444444444444531 23457888889999999999998
Q ss_pred cCCCCEEEEcCCCchH--HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCH
Q 018147 212 RSENDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (360)
Q Consensus 212 ~~~gd~Vlv~~P~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~ 289 (360)
. +||+|+++.++|.. +...++..|++++.++.+++ +.+|++++++.+++. ++++|++++|+||||.+.+
T Consensus 72 ~-~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~i~~~-----~~~~v~i~~~~~~~G~~~~- 142 (356)
T cd06451 72 E-PGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWG--EAVSPEEIAEALEQH-----DIKAVTLTHNETSTGVLNP- 142 (356)
T ss_pred C-CCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCC--CCCCHHHHHHHHhcc-----CCCEEEEeccCCCcccccC-
Confidence 4 99999999987765 56778889999999998753 589999999999752 6899999999999999998
Q ss_pred HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 290 ~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
+++|.++|+++|+++|+|++|.- +.. ..++.. ++ .| +++.|.+|.+++...+||
T Consensus 143 --~~~i~~~a~~~~~~li~D~~~~~---g~~--~~~~~~----~~---~d---~~~~s~~K~l~~p~g~G~ 196 (356)
T cd06451 143 --LEGIGALAKKHDALLIVDAVSSL---GGE--PFRMDE----WG---VD---VAYTGSQKALGAPPGLGP 196 (356)
T ss_pred --HHHHHHHHHhcCCEEEEeeehhc---cCc--cccccc----cC---cc---EEEecCchhccCCCCcce
Confidence 78889999999999999998753 211 111111 11 23 556788999987667776
No 141
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.79 E-value=2.8e-18 Score=161.60 Aligned_cols=163 Identities=23% Similarity=0.223 Sum_probs=127.6
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCC
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT 248 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~ 248 (360)
+.++++.+|+++ | . .+-+++|+|+++++..++.+++. +||+|+++.++|..+...+...|++++.++.+.+.
T Consensus 61 i~~~~~~~A~~~----g--a-~~~~~~~~Gst~a~~~~l~al~~-~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~ 132 (294)
T cd00615 61 IKEAQELAARAF----G--A-KHTFFLVNGTSSSNKAVILAVCG-PGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNP 132 (294)
T ss_pred HHHHHHHHHHHh----C--C-CCEEEEcCcHHHHHHHHHHHcCC-CCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCc
Confidence 778888888887 3 1 23455699999999999999985 99999999999999999999999999998876554
Q ss_pred Cc----CCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCC-CccCCCCCC
Q 018147 249 GW----GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE-NVYVPEKKF 323 (360)
Q Consensus 249 ~~----~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~-~~~~~~~~~ 323 (360)
.| .+|++++++++++ .++++++++++| |+||.+++ +++|+++|+++|+++|+||+|.. +.|.+.. .
T Consensus 133 ~~~~~~~i~~~~l~~~l~~----~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~-~ 203 (294)
T cd00615 133 YYGIAGGIPPETFKKALIE----HPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPIL-P 203 (294)
T ss_pred ccCcCCCCCHHHHHHHHHh----CCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCccc-C
Confidence 43 6899999999865 136899999999 79999998 89999999999999999999975 3343321 1
Q ss_pred CCHHHHHHhhCCCCCCceEEEEeccCcCcccccccc
Q 018147 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSK 359 (360)
Q Consensus 324 ~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvG 359 (360)
.+.. .. + ..+++.|++|++ +|+|.|
T Consensus 204 ~~~~----~~-----~-~div~~S~hK~l-~g~~~~ 228 (294)
T cd00615 204 SSAA----MA-----G-ADIVVQSTHKTL-PALTQG 228 (294)
T ss_pred cchh----hc-----C-CcEEEEchhccc-chHhHH
Confidence 1111 11 1 358999999987 445543
No 142
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.79 E-value=3.1e-18 Score=166.60 Aligned_cols=193 Identities=16% Similarity=0.183 Sum_probs=133.7
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc--C----
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR--S---- 213 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~--~---- 213 (360)
.++.+.+++.+.+.+... ....|. .+.++.+++.+.+.+| .+++++++|+++++..+++.+.. .
T Consensus 44 ~~p~v~~a~~~~~~~~~~-~~~~~~-----~~~~~~l~~~la~~~g----~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~ 113 (379)
T TIGR00707 44 AHPKLVEALKEQLEKLVH-VSNLYY-----TEPQEELAEKLVEHSG----ADRVFFCNSGAEANEAALKLARKYTGDKGK 113 (379)
T ss_pred CCHHHHHHHHHHHhhccc-cccccC-----CHHHHHHHHHHHhhCC----CCEEEEeCCcHHHHHHHHHHHHHHhhccCC
Confidence 358889998888876432 122342 2345555666655555 24999999999999998886521 1
Q ss_pred CCCEEEEcCCCchHHHHHHHHcCCeEEE----eecCCCCCcCC--CHHHHHHHHHHHHhcCCCccEEEEecCCCCcccC-
Q 018147 214 ENDGILCPIPQYPLYSASIALHGGTLVP----YYLDEATGWGL--ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV- 286 (360)
Q Consensus 214 ~gd~Vlv~~P~y~~~~~~~~~~g~~~~~----v~~~~~~~~~~--d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~- 286 (360)
+||+|++++|+|..+...+...+..... .++..+..+.. |++.+++.+++ ++++|+++.++||+|..
T Consensus 114 ~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~~~p~~~~~g~~~ 187 (379)
T TIGR00707 114 EKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDD------ETAAVIVEPIQGEGGVNP 187 (379)
T ss_pred CCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhh------CeeEEEEEccccCCCCcc
Confidence 3799999999999887776666554321 23332211222 89999998876 68888886556677764
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 287 ~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
++.+++++|.++|+++|+++|+||+|.++.+.+. +.++. . .+ ..+| ++ +|||++++|+|+||
T Consensus 188 ~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~--~~~~~-~-~~---~~~d--~~---t~sK~~~~G~riG~ 249 (379)
T TIGR00707 188 ASAEFLKALREICKDKDALLIFDEVQTGIGRTGK--FFAYE-H-YG---IEPD--II---TLAKGLGGGVPIGA 249 (379)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCCCccch--hhhHH-h-cC---CCCC--EE---EEcccccCCcccEE
Confidence 6899999999999999999999999998766442 22211 1 11 1244 23 68999999999998
No 143
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.79 E-value=1.7e-18 Score=169.83 Aligned_cols=196 Identities=12% Similarity=-0.017 Sum_probs=142.2
Q ss_pred CCCCCHHHHHHHHHHHHcCC---CCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccC
Q 018147 137 QGLFSADSIERAWQILDQIP---GRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS 213 (360)
Q Consensus 137 ~~~~p~~v~~~~~~~l~~~~---~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~ 213 (360)
+..+++.+.+++.+.+.... ..+...|....+.+.+++.+++++.+.+|.. ..+|++++ +++|+..++.++++
T Consensus 28 ~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~v~~~s-gt~a~~~~l~~l~~- 103 (402)
T cd00378 28 ENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YANVQPHS-GSQANLAVYFALLE- 103 (402)
T ss_pred CCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ceeeecCC-cHHHHHHHHHHhcC-
Confidence 33458888888876543211 1123446667777888888888877777743 44566554 57999999999984
Q ss_pred CCCEEEEcCCCchHHHHH-----HHHcCCeEEEeecCCCC-CcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCC
Q 018147 214 ENDGILCPIPQYPLYSAS-----IALHGGTLVPYYLDEAT-GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (360)
Q Consensus 214 ~gd~Vlv~~P~y~~~~~~-----~~~~g~~~~~v~~~~~~-~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~ 287 (360)
+||+|+++.|+|+.+... ++..|.++..++++.+. ++.+|++++++++... +++++++++|+||+ ..
T Consensus 104 ~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~-----~~~~v~~~~~~~~~--~~ 176 (402)
T cd00378 104 PGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEF-----KPKLIVAGASAYPR--PI 176 (402)
T ss_pred CCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhC-----CCCEEEecCcccCC--Cc
Confidence 999999999999876443 66678887777776542 5799999999998642 68899999998874 33
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCC-CCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 288 AEENQRAIVDFCKKEGLVLLADEVY-QENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 288 ~~~~l~~i~~la~~~~i~lI~DeaY-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
+ +++|+++|+++|+++|+|++| .++.+.+. ....+. ..| +++.|+||.| +|.|.||
T Consensus 177 ~---~~~I~~l~~~~~~~li~D~a~~~g~~~~g~-~~~~~~---------~~d---v~~~s~sK~l-~G~~gg~ 233 (402)
T cd00378 177 D---FKRFREIADEVGAYLLVDMAHVAGLVAGGV-FPNPLP---------GAD---VVTTTTHKTL-RGPRGGL 233 (402)
T ss_pred C---HHHHHHHHHhcCCEEEEEccchhhhhhccc-CCCccc---------CCc---EEEeccccCC-CCCCceE
Confidence 4 889999999999999999995 66555442 111111 123 6799999998 6688886
No 144
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.79 E-value=1.1e-17 Score=162.19 Aligned_cols=174 Identities=17% Similarity=0.185 Sum_probs=137.9
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCC---
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND--- 216 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd--- 216 (360)
.|+++++++.+.+++ |. +..++++++++++.+.+| .+++++|+|+++|+.+++.+++. +||
T Consensus 25 ~~~~v~~a~~~~~~~--------~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~t~al~~al~al~~-~Gd~~~ 88 (363)
T TIGR01437 25 VSDEVADAQKRGAQN--------YF---EIKELVNKTGEYIANLLG----VEDAVIVSSASAGIAQSVAAVIT-RGNRYL 88 (363)
T ss_pred CCHHHHHHHHHHHhc--------CC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCHHHHHHHHHHHHhc-CCCcch
Confidence 588999998887653 22 357888888888888777 35799999999999999999984 888
Q ss_pred ------------EEEEcCCCchHH----HHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEE-EecC
Q 018147 217 ------------GILCPIPQYPLY----SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALV-VINP 279 (360)
Q Consensus 217 ------------~Vlv~~P~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~ii-l~~P 279 (360)
+|+++.|.|..| ...+...|++++.++.+ +.+|++++++++++ ++++++ +++|
T Consensus 89 ~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~----~~~d~~~le~ai~~------~t~ai~~v~~~ 158 (363)
T TIGR01437 89 VENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA----NECSAEQLEAAITE------KTAAILYIKSH 158 (363)
T ss_pred hhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC----CCCCHHHHHHhcCh------hceEEEEEecC
Confidence 999999888866 56778889999998763 47999999999987 788766 5688
Q ss_pred CCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcccccccc
Q 018147 280 GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSK 359 (360)
Q Consensus 280 ~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvG 359 (360)
+||+|.+.+ +++|+++|+++|+++|+|++|... .. ... .++ .| +++.|++|.++| .|.|
T Consensus 159 ~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~~-------~~---~~~-~~g---~D---~~~~S~~K~l~g-p~~G 217 (363)
T TIGR01437 159 HCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEED-------LQ---KYY-RLG---AD---LVIYSGAKAIEG-PTSG 217 (363)
T ss_pred CCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCCc-------hH---HHH-HcC---CC---EEEEeCCcccCC-CceE
Confidence 999999999 788899999999999999999721 11 111 111 13 677999998754 4577
Q ss_pred C
Q 018147 360 W 360 (360)
Q Consensus 360 w 360 (360)
|
T Consensus 218 ~ 218 (363)
T TIGR01437 218 L 218 (363)
T ss_pred E
Confidence 5
No 145
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.79 E-value=1.3e-17 Score=162.10 Aligned_cols=202 Identities=14% Similarity=0.132 Sum_probs=136.4
Q ss_pred CCccccCcc-C--CCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHH
Q 018147 128 PSILDRSET-Q--GLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVH 204 (360)
Q Consensus 128 p~~l~~~~~-~--~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~ 204 (360)
.++||++.+ . ...++.+++++.+.+..... ....|....|...+++.+++.+.+.+| .++.|++++| ++++.
T Consensus 39 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~~---~~~~i~~~~g-~~~~~ 113 (385)
T PRK05958 39 RRMLNFASNDYLGLARHPRLIAAAQQAARRYGA-GSGGSRLVTGNSPAHEALEEELAEWFG---AERALLFSSG-YAANL 113 (385)
T ss_pred ceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCC-CCCCcCcccCCcHHHHHHHHHHHHHhC---CCcEEEECcH-HHHHH
Confidence 344555444 1 13468899999888876321 122344444555556666666655555 2455555555 55666
Q ss_pred HHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcc
Q 018147 205 MMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (360)
Q Consensus 205 ~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG 284 (360)
.++..++ ++||.|+++.|+|+.+...++..|.+++.++. .|++.+++.+++. ..++.++++.+++||||
T Consensus 114 ~~l~~~~-~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~---~~~~~lvi~~~~~~~~G 182 (385)
T PRK05958 114 AVLTALA-GKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKW---RAGRALIVTESVFSMDG 182 (385)
T ss_pred HHHHHhC-CCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhc---cCCCeEEEEEecccCCC
Confidence 6777787 59999999999999999999999999888764 3788999888652 01244555557899999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 285 ~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
...+ +++|+++|+++|+++|+||+|....++... ..+... ..+. ..+ ++|++.|+||+|++
T Consensus 183 ~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g--~~~~~~-~~~~-~~~--~~i~~~s~sK~~~~ 243 (385)
T PRK05958 183 DLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQG--RGLAAE-AGLA-GEP--DVILVGTLGKALGS 243 (385)
T ss_pred CcCC---HHHHHHHHHHhCCEEEEECcccccccCCCC--CchHHh-hCCC-CCC--ceEEEEechhhccc
Confidence 8877 899999999999999999999876554321 111111 1111 112 47999999999864
No 146
>PRK02948 cysteine desulfurase; Provisional
Probab=99.79 E-value=4.6e-18 Score=165.69 Aligned_cols=185 Identities=16% Similarity=0.119 Sum_probs=131.9
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCCCC----CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-
Q 018147 138 GLFSADSIERAWQILDQIPGRATGAYSH----SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR- 212 (360)
Q Consensus 138 ~~~p~~v~~~~~~~l~~~~~~~~~~Y~~----~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~- 212 (360)
..+|+.+++++.+.+..........|.. ..-..++|+.+|+++ | +++++|++|+|+++++..++..++.
T Consensus 10 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~i~~~~g~t~a~~~~~~~~~~~ 83 (381)
T PRK02948 10 TPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMI----G--GEEQGIYFTSGGTESNYLAIQSLLNA 83 (381)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEeCcHHHHHHHHHHHHHHh
Confidence 3568889999888776532101111111 111445566666665 3 5688999999999999998888752
Q ss_pred --CCCCEEEEcCCCchHH---HHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCC
Q 018147 213 --SENDGILCPIPQYPLY---SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (360)
Q Consensus 213 --~~gd~Vlv~~P~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~ 287 (360)
.+||.|++....|+.+ ...++..|++++.++++++ +.+|+++|++++++ ++++|++++|+||||.++
T Consensus 84 ~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~~~ 155 (381)
T PRK02948 84 LPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKS--GLIRLVDLERAITP------DTVLASIQHANSEIGTIQ 155 (381)
T ss_pred ccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCC--CCCCHHHHHHhcCC------CCEEEEEECCcCCcEeeh
Confidence 3789999999666654 4456677999999998754 57899999998865 688999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 288 AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 288 ~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
+ +++|.++|+++|+++|+|+++ .+...+ ..+. .. + ..+++.|++|.+++
T Consensus 156 ~---~~~I~~l~~~~~~~vivD~~~-~~g~~~----~~~~----~~----~--~d~~~~s~~K~~gp 204 (381)
T PRK02948 156 P---IAEIGALLKKYNVLFHSDCVQ-TFGKLP----IDVF----EM----G--IDSLSVSAHKIYGP 204 (381)
T ss_pred h---HHHHHHHHHHcCCEEEEEChh-hccccc----cCcc----cC----C--CCEEEecHHhcCCC
Confidence 8 788999999999999999654 422111 1111 11 1 23678899998764
No 147
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.79 E-value=2.6e-18 Score=169.40 Aligned_cols=158 Identities=16% Similarity=0.125 Sum_probs=125.5
Q ss_pred CCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHH----HHHHHHcC
Q 018147 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY----SASIALHG 236 (360)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~----~~~~~~~g 236 (360)
..|+.+. ..+|++.+|+++ | .+..++++++++|+..++..++. +||+|+++.+.|+.. ...++..|
T Consensus 52 sr~~~p~-~~~le~~lA~l~----g----~~~~v~~~sG~~Ai~~al~~l~~-~Gd~Vl~~~~~y~~t~~~~~~~~~~~G 121 (418)
T TIGR01326 52 SRLMNPT-TDVLEQRIAALE----G----GVAALAVASGQAAITYAILNLAQ-AGDNIVSSSYLYGGTYNLFKHTLKRLG 121 (418)
T ss_pred ECCCChh-HHHHHHHHHHHh----C----CCeEEEEccHHHHHHHHHHHHhC-CCCEEEEECCCcHHHHHHHHHHHHHcC
Confidence 4455444 678888888876 3 25688899999999999988884 999999999988653 44567789
Q ss_pred CeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 018147 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (360)
Q Consensus 237 ~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~ 316 (360)
++++.++.+ |++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....
T Consensus 122 ~~v~~v~~~-------d~~~l~~~l~~------~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~ 185 (418)
T TIGR01326 122 IEVRFVDPD-------DPEEFEKAIDE------NTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPY 185 (418)
T ss_pred cEEEEECCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhh
Confidence 999988742 78999998876 7899999999999999988 8899999999999999999997532
Q ss_pred cCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc-cccccC
Q 018147 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFSKW 360 (360)
Q Consensus 317 ~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~RvGw 360 (360)
+.. ++ . . + ..|+++|+||.++| |.|+||
T Consensus 186 ~~~-----~l----~-~-----g-~Divv~S~sK~l~g~G~~lGg 214 (418)
T TIGR01326 186 LCR-----PI----D-H-----G-ADIVVHSATKYIGGHGTAIGG 214 (418)
T ss_pred cCC-----ch----h-c-----C-CeEEEECccccccCCccceEE
Confidence 111 11 1 1 1 35899999999988 999997
No 148
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.79 E-value=2.8e-18 Score=167.87 Aligned_cols=203 Identities=14% Similarity=0.137 Sum_probs=143.8
Q ss_pred CCCccccCcc----CCCC-CHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET----QGLF-SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~----~~~~-p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
..+++|+..+ ..+. ++.+.+++.+.+..... ....| ..++++++++++.+..| .+++++|+|+++
T Consensus 38 g~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~-----~~~~~~~la~~l~~~~~----~~~v~~~~gg~e 107 (396)
T PRK02627 38 GKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIH-TSNLY-----YIEPQEELAEKLVELSG----MDKVFFCNSGAE 107 (396)
T ss_pred CCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccc-ccccc-----CCHHHHHHHHHHHhhcC----CCEEEECCCcHH
Confidence 3445565544 2344 57888888888775421 11122 35788888988887654 479999999999
Q ss_pred HHHHHHHHHccCCC-------CEEEEcCCCchHHHHHHHHcCCeEE----EeecCCCCCc----CCCHHHHHHHHHHHHh
Q 018147 202 AVHMMMQLLIRSEN-------DGILCPIPQYPLYSASIALHGGTLV----PYYLDEATGW----GLETSEVKKQLEAAKA 266 (360)
Q Consensus 202 al~~~~~~l~~~~g-------d~Vlv~~P~y~~~~~~~~~~g~~~~----~v~~~~~~~~----~~d~~~L~~~i~~~~~ 266 (360)
|+..+++.+.. .+ ++|++..+.|..+.......+.... ..++.. ++ ..|++++++++.+
T Consensus 108 A~~~al~~a~~-~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~i~~--- 181 (396)
T PRK02627 108 ANEAAIKLARK-YGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVE--GFIYVPFNDIEALKAAITD--- 181 (396)
T ss_pred HHHHHHHHHHH-HhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCC--CceEeCCCCHHHHHHhcCC---
Confidence 99999997653 22 7799999999877655544433221 111111 11 2288999998854
Q ss_pred cCCCccEEEEecCCCCcc-cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEE
Q 018147 267 KGITVRALVVINPGNPTG-QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSF 345 (360)
Q Consensus 267 ~g~~~k~iil~~P~NPTG-~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~ 345 (360)
++++|+++.++||+| .+++.+.+++|.++|+++|+++|+||+|.++.+.+. +.++... + ..+| +
T Consensus 182 ---~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~--~~~~~~~--~---~~pd-----i 246 (396)
T PRK02627 182 ---KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGK--LFAYQHY--G---IEPD-----I 246 (396)
T ss_pred ---CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCc--eeeehhc--C---CCCC-----E
Confidence 789999998899999 688999999999999999999999999999766543 2222111 1 1244 2
Q ss_pred eccCcCccccccccC
Q 018147 346 QSVSKGRYFHFFSKW 360 (360)
Q Consensus 346 ~S~SK~~~g~~RvGw 360 (360)
.+|||++++|+|+||
T Consensus 247 ~t~sK~~~~G~rig~ 261 (396)
T PRK02627 247 MTLAKGLGGGVPIGA 261 (396)
T ss_pred EEEcchhhCCcccEE
Confidence 479999999999998
No 149
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.79 E-value=7.9e-18 Score=163.48 Aligned_cols=161 Identities=16% Similarity=0.251 Sum_probs=128.0
Q ss_pred CCCCCHHHHHHHHHHHHcCCC-CCCCCCCC----CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHc
Q 018147 137 QGLFSADSIERAWQILDQIPG-RATGAYSH----SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI 211 (360)
Q Consensus 137 ~~~~p~~v~~~~~~~l~~~~~-~~~~~Y~~----~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~ 211 (360)
+...|+.+++++.+.+..... .....|.. ..+..++|+.+++++ |.. ..++|++|+|+++++..++.+++
T Consensus 9 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~g~t~al~~~~~~~~ 83 (376)
T TIGR01977 9 TYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLF----NAP-SSAHVVFTNNATTALNIALKGLL 83 (376)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHh----CcC-CCCeEEEeCCHHHHHHHHHHhcc
Confidence 446688899988888776421 11223443 245678888888877 321 34589999999999999999988
Q ss_pred cCCCCEEEEcCCCchHHHH----HHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCC
Q 018147 212 RSENDGILCPIPQYPLYSA----SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (360)
Q Consensus 212 ~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~ 287 (360)
. +||+|+++.+.|+.+.. .++.+|.+++.++.+.+ +.+|++++++++++ +++++++++|+||||.++
T Consensus 84 ~-~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~~~~------~~~~v~~~~~~n~tG~~~ 154 (376)
T TIGR01977 84 K-EGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNE--GLISPERIKRAIKT------NTKLIVVSHASNVTGTIL 154 (376)
T ss_pred C-CCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCC--CCcCHHHHHHhcCC------CCeEEEEECCCCCccccC
Confidence 4 99999999999987643 44556999999988653 57899999999865 789999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 288 AEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 288 ~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
+ +++|.++|+++|+++|+|+++..
T Consensus 155 ~---~~~i~~l~~~~~~~livD~a~~~ 178 (376)
T TIGR01977 155 P---IEEIGELAQENGIFFILDAAQTA 178 (376)
T ss_pred C---HHHHHHHHHHcCCEEEEEhhhcc
Confidence 9 77889999999999999999975
No 150
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=3.8e-18 Score=166.42 Aligned_cols=159 Identities=14% Similarity=0.183 Sum_probs=122.1
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHH----Hc
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA----LH 235 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~----~~ 235 (360)
...|+.+. ...|++++|++. | .+++++++|+++++..++..++. +||+|+++.|.|+.....+. ..
T Consensus 46 Y~R~~~pt-~~~L~~~lA~l~----g----~~~~i~~~sg~~Ai~~~l~~l~~-~GD~Vl~~~~~y~~~~~~~~~~~~~~ 115 (386)
T PRK08045 46 YSRRGNPT-RDVVQRALAELE----G----GAGAVLTNTGMSAIHLVTTVFLK-PGDLLVAPHDCYGGSYRLFDSLAKRG 115 (386)
T ss_pred eeCCCCcc-HHHHHHHHHHHh----C----CCeEEEECCHHHHHHHHHHHHcC-CCCEEEEcCCCcHHHHHHHHHHHhhC
Confidence 55666664 788888888886 3 24699999999999999999984 99999999999996433322 23
Q ss_pred CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 018147 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (360)
Q Consensus 236 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~ 315 (360)
|.++..++ ..|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...
T Consensus 116 gi~v~~vd-------~~d~e~l~~~l~~------~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~ 179 (386)
T PRK08045 116 CYRVLFVD-------QGDEQALRAALAE------KPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSP 179 (386)
T ss_pred CeEEEEeC-------CCCHHHHHHhccc------CCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcc
Confidence 34555542 3578999998876 7999999999999999998 788889999999999999999875
Q ss_pred ccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc--cccccC
Q 018147 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF--HFFSKW 360 (360)
Q Consensus 316 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g--~~RvGw 360 (360)
.... ++ ..+ .| ++++|++|.++| +++.||
T Consensus 180 ~~~~-----pl-----~~g---aD---ivv~S~tK~l~G~~d~~~G~ 210 (386)
T PRK08045 180 ALQN-----PL-----ALG---AD---LVLHSCTKYLNGHSDVVAGV 210 (386)
T ss_pred ccCC-----ch-----hhC---CC---EEEeecceeccCCCCceeEE
Confidence 3321 11 111 23 889999998874 667765
No 151
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.78 E-value=6.6e-18 Score=164.32 Aligned_cols=153 Identities=17% Similarity=0.257 Sum_probs=124.0
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH-ccCCCCEE
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGI 218 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l-~~~~gd~V 218 (360)
+..+.++++.+.+.+.. . + |...+++++++++.+..| .+++++|+|+++|+.+++.++ + +|||+|
T Consensus 9 ~~~~e~~a~~~~~~~~~---~--~----~~g~~~~~~e~~la~~~g----~~~~v~~~sgt~aL~~~l~al~~-~pGd~V 74 (376)
T TIGR02379 9 VTGQELEYIAEAISEGK---L--S----GDGPFSRRCETWLENRTG----TKKALLTPSCTAALEMAALLLDI-QPGDEV 74 (376)
T ss_pred CCHHHHHHHHHHHHcCC---c--c----CCcHHHHHHHHHHHHHhC----CCeEEEeCCHHHHHHHHHHHcCC-CCcCEE
Confidence 35666777777776521 1 1 223466677777766544 478999999999999999887 5 599999
Q ss_pred EEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHH
Q 018147 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (360)
Q Consensus 219 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~l 298 (360)
+++.++|+.+...+...|++++.++++++ +|.+|++++++++++ ++|+|+ |+||+|...+ +++|.++
T Consensus 75 iv~~~t~~~~~~~~~~~G~~~v~vd~d~~-~~~~d~~~le~~i~~------~tk~Ii---p~~~~G~~~d---~~~I~~l 141 (376)
T TIGR02379 75 IMPSYTFVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIESAITH------RTKAIV---PVHYAGVACD---MDTIMAL 141 (376)
T ss_pred EECCCCcHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCc------CceEEE---EeCCCCCccC---HHHHHHH
Confidence 99999999999999999999999999865 488999999999876 788886 5678999887 8899999
Q ss_pred HHHcCCEEEEccCCCCCc-cCC
Q 018147 299 CKKEGLVLLADEVYQENV-YVP 319 (360)
Q Consensus 299 a~~~~i~lI~DeaY~~~~-~~~ 319 (360)
|+++|++||+|++|+... |++
T Consensus 142 a~~~~i~vIeDaa~~~g~~~~~ 163 (376)
T TIGR02379 142 ANKHQLFVIEDAAQGVMSTYKG 163 (376)
T ss_pred HHHCCCEEEEECccccCCccCC
Confidence 999999999999998764 444
No 152
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.78 E-value=6.1e-18 Score=165.76 Aligned_cols=159 Identities=17% Similarity=0.203 Sum_probs=123.3
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHH----HHHc
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALH 235 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~----~~~~ 235 (360)
...|+.+. ...|++.+|+++ | . +..+++++++.++..++..++ ++||+|+++.|.|..+... +...
T Consensus 59 y~r~~~p~-~~~Le~~lA~l~----G--~--~~~~~~~sG~~Ai~~~l~~~l-~~Gd~Vl~~~~~y~~~~~~~~~~~~~~ 128 (398)
T PRK07504 59 YSRYSNPT-VDMFEKRMCALE----G--A--EDARATASGMAAVTAAILCQV-KAGDHVVAARALFGSCRYVVETLLPRY 128 (398)
T ss_pred eecCCCch-HHHHHHHHHHHh----C--C--CeeeEecCHHHHHHHHHHHHh-CCCCEEEEcCCchhHHHHHHHHHHhhc
Confidence 34565554 788999999886 3 2 233456778889988887777 4999999999999976544 3456
Q ss_pred CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 018147 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (360)
Q Consensus 236 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~ 315 (360)
|++++.++ .+|++++++++++ ++|+|++++|+||||.+++ +++|.++|+++|+++|+|++|...
T Consensus 129 G~~v~~vd-------~~d~e~l~~ai~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~ 192 (398)
T PRK07504 129 GIESTLVD-------GLDLDNWEKAVRP------NTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATP 192 (398)
T ss_pred CeEEEEEC-------CCCHHHHHHhcCc------CceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCcccc
Confidence 88888874 3689999999876 7999999999999999998 888999999999999999999875
Q ss_pred ccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc-cccccC
Q 018147 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFSKW 360 (360)
Q Consensus 316 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~RvGw 360 (360)
.+... + .++ . .++++|+||.|+| |.|+||
T Consensus 193 ~~~~~-----~-----~~g---a---Divv~S~sK~l~g~g~~~GG 222 (398)
T PRK07504 193 LFQKP-----L-----ELG---A---HIVVYSATKHIDGQGRCLGG 222 (398)
T ss_pred ccCCc-----h-----hhC---C---CEEEeeccccccCCccceEE
Confidence 44211 1 111 1 3789999999976 888863
No 153
>PRK07179 hypothetical protein; Provisional
Probab=99.78 E-value=1.9e-17 Score=162.82 Aligned_cols=198 Identities=15% Similarity=0.079 Sum_probs=141.3
Q ss_pred ccccCcc---CCCCCHHHHHHHHHHHHcCCCCC--CCCCC-CCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 018147 130 ILDRSET---QGLFSADSIERAWQILDQIPGRA--TGAYS-HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (360)
Q Consensus 130 ~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~--~~~Y~-~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al 203 (360)
+++++.+ ...-.|++++++.+.+.+.+... ...|. ......+|++.+|+++ | .+.+++++|+++|+
T Consensus 56 ~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~----g----~~~~~~~~sG~~An 127 (407)
T PRK07179 56 AIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT----G----FESCLLCQSGWAAN 127 (407)
T ss_pred EEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh----C----CCcEEEECCHHHHH
Confidence 4444444 22347889999988887643210 11121 1123567777777776 3 35678899999999
Q ss_pred HHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCc
Q 018147 204 HMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT 283 (360)
Q Consensus 204 ~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPT 283 (360)
..++++++. +||.|++..+.|......++..|++++.++ ..|+++|++++++. ++++|++.+|+|||
T Consensus 128 ~~~l~~l~~-~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~-----~~~lV~v~~v~n~t 194 (407)
T PRK07179 128 VGLLQTIAD-PNTPVYIDFFAHMSLWEGVRAAGAQAHPFR-------HNDVDHLRRQIERH-----GPGIIVVDSVYSTT 194 (407)
T ss_pred HHHHHHhCC-CCCEEEEECCcCHHHHHHHHHCCCeEEEec-------CCCHHHHHHHHHhc-----CCeEEEECCCCCCC
Confidence 999999985 999999999999988888888898877654 24899999998752 46788888999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 284 GQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 284 G~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
|.+.+ +++|.++|+++|+++|+||+|....++.. ...+.... ++. ++ -.+++.|+||++++ |+||
T Consensus 195 G~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~--g~g~~~~~-~~~---~~-vdi~~~S~sK~~g~--~~G~ 259 (407)
T PRK07179 195 GTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQ--GAGLVAEL-GLT---SR-VHFITASLAKAFAG--RAGI 259 (407)
T ss_pred Ccccc---HHHHHHHHHHcCCEEEEECcccccCcCCC--CCchHHhc-CCC---CC-CCEEEeechHhhhc--cCeE
Confidence 99999 78899999999999999999986444322 11222111 110 11 13788999999975 6886
No 154
>PRK06460 hypothetical protein; Provisional
Probab=99.78 E-value=4e-18 Score=165.88 Aligned_cols=153 Identities=14% Similarity=0.187 Sum_probs=113.8
Q ss_pred cCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCC----CchHHHHHHHHcCCeEEEe
Q 018147 167 QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIP----QYPLYSASIALHGGTLVPY 242 (360)
Q Consensus 167 ~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P----~y~~~~~~~~~~g~~~~~v 242 (360)
....+|++.+|+++ | . ...+++ +++++++..++..+++ +||+|+++.| +|..|...++..|+++..+
T Consensus 45 p~~~~L~~~lA~l~----g--~-~~~v~~-~sG~~ai~~~l~al~~-~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~ 115 (376)
T PRK06460 45 PTVLELTKKIVELE----N--A-EMGVAF-SSGMGAISTTALALLK-PGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDAS 115 (376)
T ss_pred ccHHHHHHHHHHHh----C--C-CcEEEe-CCHHHHHHHHHHHHhC-CCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEE
Confidence 35889999999987 2 2 234555 4457999999999985 9999999975 4556667788899998887
Q ss_pred ecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCC
Q 018147 243 YLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKK 322 (360)
Q Consensus 243 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~ 322 (360)
+.++ .+.+++.+++ ++|+|++++|+||||.+++ +++|+++|+++|+++|+|++|..... .
T Consensus 116 ~~~~-------~~~l~~~~~~------~tklV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~~~-~--- 175 (376)
T PRK06460 116 NPGS-------DNIIEKAKSK------RYDVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTPIN-Q--- 175 (376)
T ss_pred CCCC-------HHHHHHhcCC------CceEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCcccc-C---
Confidence 7542 2334433333 7899999999999999999 66788999999999999999986321 1
Q ss_pred CCCHHHHHHhhCCCCCCceEEEEeccCcCccc--cccccC
Q 018147 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF--HFFSKW 360 (360)
Q Consensus 323 ~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g--~~RvGw 360 (360)
. .. . . + ..|+++|+||.|+| +.|.||
T Consensus 176 -~---~l-~-~-----~-~divv~S~sK~l~G~~~~~~G~ 203 (376)
T PRK06460 176 -K---PL-E-L-----G-ADIVVHSASKFLAGHNDVIAGL 203 (376)
T ss_pred -C---hh-h-c-----C-CCEEEeecceeccCCCCceEEE
Confidence 1 11 0 0 1 24899999999875 478887
No 155
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.78 E-value=5.3e-18 Score=166.45 Aligned_cols=158 Identities=15% Similarity=0.198 Sum_probs=122.5
Q ss_pred CCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchH----HHHHHHHcC
Q 018147 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALHG 236 (360)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~----~~~~~~~~g 236 (360)
..|+.+. ...|++.+|+++ | .+..+++++++.|+..++..++ .+||+|+++.|.|.. +...++..|
T Consensus 60 ~r~~~p~-~~~le~~lA~l~----g----~~~~i~~~sG~~Al~~~l~~ll-~~Gd~Viv~~~~y~~t~~~~~~~~~~~G 129 (403)
T PRK07503 60 SRISNPT-LALLEQRMASLE----G----GEAAVALASGMGAITATLWTLL-RPGDEVIVDQTLYGCTFAFLHHGLGEFG 129 (403)
T ss_pred eCCCCch-HHHHHHHHHHHh----C----CCcEEEEcCHHHHHHHHHHHHc-CCCCEEEEccCccchHHHHHHHHHhhCC
Confidence 3444443 788888888886 2 2345666677899999998888 499999999998864 334456789
Q ss_pred CeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 018147 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (360)
Q Consensus 237 ~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~ 316 (360)
++++.++.+ |++++++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|....
T Consensus 130 ~~v~~vd~~-------d~~~l~~~i~~------~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~ 193 (403)
T PRK07503 130 VTVRHVDLT-------DPAALKAAISD------KTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPY 193 (403)
T ss_pred EEEEEeCCC-------CHHHHHHhcCc------cCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccc
Confidence 998888653 68899998876 7999999999999999988 8899999999999999999998643
Q ss_pred cCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc--cccccC
Q 018147 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF--HFFSKW 360 (360)
Q Consensus 317 ~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g--~~RvGw 360 (360)
... ++ ..+ .| |+++|+||.++| ++|.||
T Consensus 194 ~~~-----~l-----~~g---~D---i~v~S~tK~l~g~gd~~gG~ 223 (403)
T PRK07503 194 LQR-----PL-----ELG---AD---LVVHSATKYLGGHGDITAGL 223 (403)
T ss_pred cCC-----ch-----hhC---CC---EEEccccccccCCCceeEEE
Confidence 321 11 111 23 889999999986 577775
No 156
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=6.6e-18 Score=164.55 Aligned_cols=159 Identities=14% Similarity=0.130 Sum_probs=124.7
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHH----HHHc
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALH 235 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~----~~~~ 235 (360)
..+|+.+. ...|++++|++. | .+++++|+|+++|+..++.+++ ++||+|+++.|.|...... ....
T Consensus 47 Y~R~~npt-~~~Le~~lA~le----g----~e~ivvt~gg~~Ai~~~l~all-~~Gd~Il~~~~~y~~~~~~~~~~~~~~ 116 (388)
T PRK08861 47 YTRSGNPN-RGLLEQTLSELE----S----GKGAVVTNCGTSALNLWVSALL-GPDDLIVAPHDCYGGTYRLFNTRANKG 116 (388)
T ss_pred ccCCCCch-HHHHHHHHHHHh----C----CCeEEEECCHHHHHHHHHHHHc-CCCCEEEEcCCchHHHHHHHHHHHhcC
Confidence 44566655 788888888887 2 5899999999999999999998 4999999999999864332 2334
Q ss_pred CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 018147 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (360)
Q Consensus 236 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~ 315 (360)
|.+++.++ ..|++++++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...
T Consensus 117 gi~v~~vd-------~~d~e~l~~~i~~------~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~ 180 (388)
T PRK08861 117 DFKVQFVD-------QSDAAALDAALAK------KPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTP 180 (388)
T ss_pred CeEEEEEC-------CCCHHHHHHhcCc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcccc
Confidence 67777764 2478999988876 7999999999999999999 778899999999999999999875
Q ss_pred ccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc--cccccC
Q 018147 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF--HFFSKW 360 (360)
Q Consensus 316 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g--~~RvGw 360 (360)
.+... . .++ -| ++++|++|.++| +++-||
T Consensus 181 ~~~~p--l--------~~G---aD---ivv~S~tK~l~G~~d~~gG~ 211 (388)
T PRK08861 181 VLQKP--L--------ELG---AD---FVIHSTTKYINGHSDVIGGV 211 (388)
T ss_pred ccCCC--c--------ccC---CC---EEEeecceeccCCCcceeEE
Confidence 44321 1 111 23 889999998875 455554
No 157
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.77 E-value=6.5e-18 Score=165.43 Aligned_cols=155 Identities=12% Similarity=0.153 Sum_probs=120.1
Q ss_pred CCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHH----HHHHcCC
Q 018147 162 AYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHGG 237 (360)
Q Consensus 162 ~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~----~~~~~g~ 237 (360)
.|+.+. ...|++.+|+++ | .++.++++++++|+..++.+++. +||+|+++.|.|..... .+...|+
T Consensus 60 r~~~p~-~~~le~~lA~l~----g----~~~~i~~ssG~~Ai~~~l~all~-~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi 129 (398)
T PRK08249 60 RNTNPT-VQAFEEKVRILE----G----AEAATAFSTGMAAISNTLYTFLK-PGDRVVSIKDTYGGTNKIFTEFLPRMGV 129 (398)
T ss_pred CCCChH-HHHHHHHHHHHh----C----CCeEEEeCChHHHHHHHHHHhcC-CCCEEEEcCCchHHHHHHHHHHHhhCCe
Confidence 344443 678888888887 2 34567777778999999998884 99999999999987543 4556788
Q ss_pred eEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCcc
Q 018147 238 TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317 (360)
Q Consensus 238 ~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~ 317 (360)
+++.++ ..|++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.....
T Consensus 130 ~v~~vd-------~~d~e~l~~~i~~------~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~ 193 (398)
T PRK08249 130 DVTLCE-------TGDHEQIEAEIAK------GCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPIN 193 (398)
T ss_pred EEEEcC-------CCCHHHHHHhcCC------CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCcccc
Confidence 887664 2489999999876 7999999999999999999 88899999999999999999997543
Q ss_pred CCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc-cccc
Q 018147 318 VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFS 358 (360)
Q Consensus 318 ~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~Rv 358 (360)
.. ++ ..+ .| ++++|+||.++| +.++
T Consensus 194 ~~-----~l-----~~~---~D---ivv~S~sK~l~g~~~~~ 219 (398)
T PRK08249 194 QN-----PL-----ALG---AD---LVIHSATKFLSGHADAL 219 (398)
T ss_pred CC-----ch-----hhC---CC---EEeccCceecCCCCCce
Confidence 21 11 111 23 778999999976 5454
No 158
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.77 E-value=2.3e-17 Score=158.66 Aligned_cols=176 Identities=17% Similarity=0.144 Sum_probs=128.6
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEE
Q 018147 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (360)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv 220 (360)
.|.+++++.+.++... |..++.+++.+.+.+.+| ++++++++++|+.+++..++.+++ ++||.|++
T Consensus 35 ~~~~~~~~~~~~~~~~-----------g~~~~~~~Le~~lA~~~g--~~~e~ilv~~gg~~a~~~~~~al~-~~gd~Vli 100 (346)
T TIGR03576 35 GFKIDEEDLELLETYV-----------GPAIFEEKVQELGREHLG--GPEEKILVFNRTSSAILATILALE-PPGRKVVH 100 (346)
T ss_pred ChhHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHHHcC--CCcceEEEECCHHHHHHHHHHHhC-CCCCEEEE
Confidence 5668888888777631 344555555555555555 468999999999999999999999 49999997
Q ss_pred c---CCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHH
Q 018147 221 P---IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (360)
Q Consensus 221 ~---~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~ 297 (360)
+ .|+|+.|...++..|++++.+ .++++++. . + ++++|++ +++|++|.+++.+++++|++
T Consensus 101 ~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~-~-~------~~~lIii-tg~s~~G~v~~~~~L~~i~~ 162 (346)
T TIGR03576 101 YLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK-I-D------GTSLVVI-TGSTMDLKVVSEEDLKRVIK 162 (346)
T ss_pred CCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh-C-c------CceEEEE-ECCCCCCcccCHHHHHHHHH
Confidence 5 479999999999999986432 13444322 1 1 5677776 55799999999999999999
Q ss_pred HHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 298 la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
+|+++|+++|+||+|..++..... ..+.. ..+ .| |++.||||++ +|+|+||
T Consensus 163 la~~~~~~livDEAy~~~~~~~~~-~~~~~----~~~---~d---ivv~s~SKal-aG~r~G~ 213 (346)
T TIGR03576 163 QAKSKEAIVLVDDASGARVRRLYG-QPPAL----DLG---AD---LVVTSTDKLM-DGPRGGL 213 (346)
T ss_pred HHHHcCCEEEEECCccccccccCC-CCCHH----HcC---Cc---EEEeccchhc-cccceEE
Confidence 999999999999999987643211 11211 111 23 6677999954 5689997
No 159
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.77 E-value=1.1e-17 Score=163.90 Aligned_cols=208 Identities=11% Similarity=0.041 Sum_probs=139.1
Q ss_pred CCCccccCcc----CCCC-CHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET----QGLF-SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~----~~~~-p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
+.+++|+..+ ..+. ++.+.+++.+.+.+... ....|....+ .++++++.+.+|. ..++++++++|+++
T Consensus 42 g~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~-~~~~~~~~~~-----~~la~~l~~~~~~-~~~~~v~~~~sgse 114 (398)
T PRK03244 42 GKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGH-VSNLFATEPQ-----IALAERLVELLGA-PEGGRVFFCNSGAE 114 (398)
T ss_pred CCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccC-ccCccCCHHH-----HHHHHHHHHhCCC-CCCCEEEEeCchHH
Confidence 4456666553 3344 78899999988887532 1234654432 3555555555552 24579999999999
Q ss_pred HHHHHHHHHccCCC-CEEEEcCCCchHHHHHHHHc-CCeEEEeec---CCCCC-c-CCCHHHHHHHHHHHHhcCCCccEE
Q 018147 202 AVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALH-GGTLVPYYL---DEATG-W-GLETSEVKKQLEAAKAKGITVRAL 274 (360)
Q Consensus 202 al~~~~~~l~~~~g-d~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~---~~~~~-~-~~d~~~L~~~i~~~~~~g~~~k~i 274 (360)
|+..+++.+.. +| +.|+..+++|..+....... |......+. ..+-. + ..|++.+++.+.+ ++++|
T Consensus 115 a~~~al~~~~~-~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~av 187 (398)
T PRK03244 115 ANEAAFKLARL-TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDD------DTAAV 187 (398)
T ss_pred HHHHHHHHHHH-HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcC------CeEEE
Confidence 99999997764 55 56777788998775443332 221111000 00000 0 1378899888754 78899
Q ss_pred EEecCCCCcccCCCHHH-HHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc
Q 018147 275 VVINPGNPTGQVLAEEN-QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY 353 (360)
Q Consensus 275 il~~P~NPTG~~~~~~~-l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 353 (360)
+++.++||||.+++.++ +++|.++|++||+++|+||+|.++.+.+. ...+ .. .+ ..|| +-+|||+++
T Consensus 188 iiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~--~~~~-~~-~~---~~pD-----i~t~sK~l~ 255 (398)
T PRK03244 188 FLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGA--WFAH-QH-DG---VTPD-----VVTLAKGLG 255 (398)
T ss_pred EEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccch--HHhh-hh-hC---CCCC-----EEEEchhhh
Confidence 99888999999997765 99999999999999999999998655442 1111 11 11 1256 238899999
Q ss_pred ccccccC
Q 018147 354 FHFFSKW 360 (360)
Q Consensus 354 g~~RvGw 360 (360)
+|+|+||
T Consensus 256 ~G~~ig~ 262 (398)
T PRK03244 256 GGLPIGA 262 (398)
T ss_pred CCcccEE
Confidence 9999997
No 160
>PLN02822 serine palmitoyltransferase
Probab=99.77 E-value=4.6e-17 Score=163.10 Aligned_cols=207 Identities=15% Similarity=0.112 Sum_probs=149.9
Q ss_pred CCCCccccCcc---CCCCCHHHHHHHHHHHHcCCCC---CCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCCh
Q 018147 126 DHPSILDRSET---QGLFSADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGA 199 (360)
Q Consensus 126 ~~p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~---~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga 199 (360)
+..+++|++.+ ....++++++++.+.+++.+.. ....|++..+..+|++++|+++. .++.|++++|.
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s~G~ 179 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYSYGL 179 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEECCHH
Confidence 34556676655 3345889999999999874320 12357777889999999999982 35789999888
Q ss_pred HHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc---CCCc-cEEE
Q 018147 200 SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK---GITV-RALV 275 (360)
Q Consensus 200 ~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~---g~~~-k~ii 275 (360)
+ ++..++.++++ +||.|++....|..+...+...|.+++.++.. |.+.++..+++..+. .+++ ++|+
T Consensus 180 ~-a~~sai~a~~~-~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~~~~~Iv 250 (481)
T PLN02822 180 S-TIFSVIPAFCK-KGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-------DMESLRNTLEKLTAENKRKKKLRRYIV 250 (481)
T ss_pred H-HHHHHHHHhCC-CCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-------CHHHHHHHHHHHhhhhcccCCCcEEEE
Confidence 7 56788889984 99999999888888888888899999988755 345555555443221 1245 5777
Q ss_pred EecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc--
Q 018147 276 VINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY-- 353 (360)
Q Consensus 276 l~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-- 353 (360)
+..++|+||.+.+ +++|+++|++||+++|+||+|...+++.. ...+.... ++.. .+ ..|++.||||+|+
T Consensus 251 ve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~--G~G~~e~~-~v~~--~~-~dii~~s~sKalg~~ 321 (481)
T PLN02822 251 VEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKS--GRGLSEHF-GVPI--EK-IDIITAAMGHALATE 321 (481)
T ss_pred EecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCC--CCChHHHc-CCCC--CC-CeEEEecchhhhhhC
Confidence 7788999999999 89999999999999999999998777643 11222211 1110 12 3488999999998
Q ss_pred cccc
Q 018147 354 FHFF 357 (360)
Q Consensus 354 g~~R 357 (360)
||.=
T Consensus 322 GG~i 325 (481)
T PLN02822 322 GGFC 325 (481)
T ss_pred CeEE
Confidence 6543
No 161
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.76 E-value=1.1e-17 Score=162.38 Aligned_cols=158 Identities=18% Similarity=0.224 Sum_probs=120.7
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchH----HHHHHHHc
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALH 235 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~----~~~~~~~~ 235 (360)
...|+.+. ..+|++.+|++. | . +..++++|+++|+..++. ++ .+||+|+++.|.|+. +...++..
T Consensus 46 y~r~~~pt-~~~le~~la~l~----g--~--~~~~~~~sG~~ai~~~~~-ll-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~ 114 (366)
T PRK08247 46 YSRTGNPT-RGVLEQAIADLE----G--G--DQGFACSSGMAAIQLVMS-LF-RSGDELIVSSDLYGGTYRLFEEHWKKW 114 (366)
T ss_pred ccCCCCch-HHHHHHHHHHHh----C--C--CcEEEEcCHHHHHHHHHH-Hh-CCCCEEEEecCCcCcHHHHHHHHhhcc
Confidence 44566655 788888888886 3 2 334778888999998764 66 499999999999986 34455668
Q ss_pred CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 018147 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (360)
Q Consensus 236 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~ 315 (360)
|++++.++. .|++++++++++ ++++|++++|+||+|. ..++++|+++|+++|+++|+|++|...
T Consensus 115 G~~v~~vd~-------~d~~~l~~~i~~------~tklv~le~P~NP~~~---~~dl~~I~~la~~~g~~lIvD~t~~~~ 178 (366)
T PRK08247 115 NVRFVYVNT-------ASLKAIEQAITP------NTKAIFIETPTNPLMQ---ETDIAAIAKIAKKHGLLLIVDNTFYTP 178 (366)
T ss_pred CceEEEECC-------CCHHHHHHhccc------CceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCccc
Confidence 999988764 378999998876 7999999999999764 566999999999999999999999643
Q ss_pred ccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc--cccccC
Q 018147 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF--HFFSKW 360 (360)
Q Consensus 316 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g--~~RvGw 360 (360)
.+.. ++ . . . ..|+++|+||.++| +++.||
T Consensus 179 ~~~~-----p~----~-~-----g-~di~i~S~sK~~~g~~d~~~G~ 209 (366)
T PRK08247 179 VLQR-----PL----E-E-----G-ADIVIHSATKYLGGHNDVLAGL 209 (366)
T ss_pred cccC-----ch----h-c-----C-CcEEEeecceeccCCCceeeeE
Confidence 2221 11 0 1 1 24899999999986 677775
No 162
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.76 E-value=1.4e-17 Score=162.81 Aligned_cols=158 Identities=15% Similarity=0.188 Sum_probs=122.5
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchH----HHHHHHHc
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALH 235 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~----~~~~~~~~ 235 (360)
...|+.+. ...|++.+|++. | .+..+++++++.|+..++..++. +||+|+++.|.|.. +...+...
T Consensus 53 y~r~~~p~-~~~le~~lA~l~----g----~~~av~~~sG~~Ai~~~l~al~~-~Gd~Vi~~~~~y~~t~~~~~~~~~~~ 122 (391)
T TIGR01328 53 YSRLGNPT-VSNLEGRIAFLE----G----TEAAVATSSGMGAIAATLLTILK-AGDHLISDECLYGCTFALLEHALTKF 122 (391)
T ss_pred eeCCCCch-HHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhC-CCCEEEEecCcchHHHHHHHHHHhcC
Confidence 34455554 678999999887 2 24467788888999999998884 99999999998764 34455668
Q ss_pred CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 018147 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (360)
Q Consensus 236 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~ 315 (360)
|+++..++++ |++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...
T Consensus 123 G~~~~~vd~~-------d~e~l~~~i~~------~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~ 186 (391)
T TIGR01328 123 GIQVDFINMA-------IPEEVKAHIKD------NTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATP 186 (391)
T ss_pred CeEEEEECCC-------CHHHHHHhhcc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchh
Confidence 9888888653 68899998876 7999999999999999998 888999999999999999999864
Q ss_pred ccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc-ccccc
Q 018147 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFSK 359 (360)
Q Consensus 316 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~RvG 359 (360)
.+... + ..+ .| |+++|+||.+++ |.|+|
T Consensus 187 ~~~~~-----~-----~~g---~D---ivv~S~sK~lgg~g~~~g 215 (391)
T TIGR01328 187 MLTNP-----V-----ALG---VD---VVVHSATKYIGGHGDVVA 215 (391)
T ss_pred ccCCc-----h-----hcC---CC---EEEccccccccCCCCceE
Confidence 43211 1 111 23 788999999986 66543
No 163
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.76 E-value=2e-17 Score=161.56 Aligned_cols=153 Identities=16% Similarity=0.170 Sum_probs=117.3
Q ss_pred cCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHH----HcCCeEEEe
Q 018147 167 QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA----LHGGTLVPY 242 (360)
Q Consensus 167 ~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~----~~g~~~~~v 242 (360)
....+|++++|++... +..++++++++|+..++.+++ ++||+|+++.|+|......+. ..|+++..+
T Consensus 61 p~~~~Le~~lA~~~g~--------~~~i~~~sG~~Ai~~~l~all-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~ 131 (388)
T PRK07811 61 PTRTALEEQLAALEGG--------AYGRAFSSGMAATDCLLRAVL-RPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPV 131 (388)
T ss_pred ccHHHHHHHHHHHhCC--------CceEEeCCHHHHHHHHHHHHh-CCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEe
Confidence 4588999999998722 223444566899999999998 499999999999985433333 247777766
Q ss_pred ecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCC
Q 018147 243 YLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKK 322 (360)
Q Consensus 243 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~ 322 (360)
+. .|++++++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 132 d~-------~d~e~l~~~i~~------~tklV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~~--- 192 (388)
T PRK07811 132 DL-------SDLDAVRAAITP------RTKLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQQ--- 192 (388)
T ss_pred CC-------CCHHHHHHhcCc------CCeEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccCC---
Confidence 53 378999998876 7999999999999998866 9999999999999999999998743321
Q ss_pred CCCHHHHHHhhCCCCCCceEEEEeccCcCccc--cccccC
Q 018147 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF--HFFSKW 360 (360)
Q Consensus 323 ~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g--~~RvGw 360 (360)
++ .++ .| +++.|++|.++| +++.||
T Consensus 193 --p~-----~~g---aD---ivv~S~sK~l~g~~~~~gG~ 219 (388)
T PRK07811 193 --PL-----ALG---AD---VVVHSTTKYIGGHSDVVGGA 219 (388)
T ss_pred --ch-----hhC---Cc---EEEecCceeecCCCCcEEEE
Confidence 11 111 23 889999999986 466776
No 164
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.76 E-value=2.3e-17 Score=161.88 Aligned_cols=158 Identities=15% Similarity=0.234 Sum_probs=117.2
Q ss_pred CCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchH----HHHHHHHcC
Q 018147 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALHG 236 (360)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~----~~~~~~~~g 236 (360)
..|+.+. ...|++.+|++. | .++.+ +++++++++..++.+++. +||+|+++.|.|.. +...++..|
T Consensus 55 ~R~~~p~-~~~Le~~lA~l~----g---~~~~v-~~~sG~~Ai~~~l~all~-pGD~Vvv~~p~Y~~t~~~~~~~~~~~g 124 (405)
T PRK08776 55 TRSGNPT-RDLLGEALAELE----G---GAGGV-ITATGMGAINLVLNALLQ-PGDTLVVPHDAYGGSWRLFNALAKKGH 124 (405)
T ss_pred cCCCChH-HHHHHHHHHHHh----C---CCceE-EEcCHHHHHHHHHHHHhC-CCCEEEEccCCchHHHHHHHHHHHhcC
Confidence 3444433 456777777664 4 13445 455558999999999984 99999999999987 445556668
Q ss_pred CeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 018147 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (360)
Q Consensus 237 ~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~ 316 (360)
.+++.+++ .|+++|++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|....
T Consensus 125 ~~v~~v~~-------~d~~~l~~~i~~------~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~ 188 (405)
T PRK08776 125 FALITADL-------TDPRSLADALAQ------SPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPA 188 (405)
T ss_pred cEEEEECC-------CCHHHHHHhcCc------CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCcccc
Confidence 88887754 378899988865 7999999999999999976 8999999999999999999997632
Q ss_pred cCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc--cccccC
Q 018147 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF--HFFSKW 360 (360)
Q Consensus 317 ~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g--~~RvGw 360 (360)
. +.++ . ++ .| +++.|.+|.++| ++..||
T Consensus 189 ~-----~~pl-~----~g---aD---ivv~S~tK~l~g~~~~~~G~ 218 (405)
T PRK08776 189 L-----QKPL-E----FG---AD---LVLHSTTKYINGHSDVVGGA 218 (405)
T ss_pred c-----CCcc-c----cc---CC---EEEecCceeecCCCCceEEE
Confidence 1 1121 1 11 23 889999999875 456664
No 165
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=1.5e-17 Score=162.77 Aligned_cols=159 Identities=18% Similarity=0.163 Sum_probs=121.5
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHH----HHHHc
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALH 235 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~----~~~~~ 235 (360)
...|+.+. ..+|++.++++. | .+++++++|+++|+..++.++++ +||+|+++.|+|..+.. .+...
T Consensus 59 Y~r~~~pt-~~~Le~~lA~l~----g----~~~~l~~~sgt~Ai~~~l~al~~-~GD~Vl~~~~~y~~~~~~~~~~~~~~ 128 (394)
T PRK07050 59 YGLHATPT-SLALAQRLAEIE----G----GRHALLQPSGLAAISLVYFGLVK-AGDDVLIPDNAYGPNRDHGEWLARDF 128 (394)
T ss_pred cCCCCCHH-HHHHHHHHHHHh----C----CCeEEEeccHHHHHHHHHHHHhC-CCCEEEEecCCcccHHHHHHHHHHhc
Confidence 34454443 667777777765 3 46899999999999999999984 99999999999997664 45667
Q ss_pred CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 018147 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (360)
Q Consensus 236 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~ 315 (360)
|++++.++.. +.+.+++++++ ++|+|++++|+||+|. ..++++|+++|+++|+++|+|++|...
T Consensus 129 Gi~v~~vd~~-------~~~~l~~~i~~------~tklV~le~p~Np~~~---~~di~~I~~ia~~~gi~livD~a~a~~ 192 (394)
T PRK07050 129 GITVRFYDPL-------IGAGIADLIQP------NTRLIWLEAPGSVTME---VPDVPAITAAARARGVVTAIDNTYSAG 192 (394)
T ss_pred CeEEEEECCC-------CHHHHHHhcCC------CCeEEEEECCCCCCcc---HhhHHHHHHHHHHcCCEEEEECCcccc
Confidence 9998887632 34678887765 7999999999999975 456999999999999999999999774
Q ss_pred ccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcccc--ccccC
Q 018147 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFH--FFSKW 360 (360)
Q Consensus 316 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~--~RvGw 360 (360)
.+.. .. ..+ .-|+++|+||.++|+ ++.||
T Consensus 193 ~~~~--------~l--~~G------aDi~v~S~tK~~~g~~~~~gG~ 223 (394)
T PRK07050 193 LAFK--------PF--EHG------VDISVQALTKYQSGGSDVLMGA 223 (394)
T ss_pred cccC--------HH--HcC------CeEEEEECCceecCCCCeeEEE
Confidence 3211 11 111 138899999999764 44664
No 166
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.76 E-value=3.5e-17 Score=159.56 Aligned_cols=157 Identities=17% Similarity=0.250 Sum_probs=123.8
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchH----HHHHHHHc
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALH 235 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~----~~~~~~~~ 235 (360)
...|..+. ..+|++.+++++ | .+++++++++++|+..++.+++. +||+|+++.+.|.. +...++..
T Consensus 48 y~r~~~p~-~~~le~~la~l~----g----~~~~~~~~sG~~Ai~~al~al~~-~Gd~Vl~~~~~~~~t~~~~~~~~~~~ 117 (380)
T TIGR01325 48 YSRYANPT-VAAFEERIAALE----G----AERAVATATGMSAIQAALMTLLQ-AGDHVVASRSLFGSTVGFISEILPRF 117 (380)
T ss_pred eecCCCch-HHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhC-CCCEEEEecCCcchHHHHHHHHHHHh
Confidence 34565554 788888888876 2 25788899999999999999884 99999999988864 34466778
Q ss_pred CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 018147 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (360)
Q Consensus 236 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~ 315 (360)
|.+++.++.+ |++++++++++ ++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|...
T Consensus 118 g~~v~~v~~~-------d~~~l~~~i~~------~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~ 181 (380)
T TIGR01325 118 GIEVSFVDPT-------DLNAWEAAVKP------NTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATP 181 (380)
T ss_pred CCEEEEECCC-------CHHHHHHhcCC------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccc
Confidence 9998888653 68888888865 7899999999999999988 899999999999999999999875
Q ss_pred ccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc-cccc
Q 018147 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFS 358 (360)
Q Consensus 316 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~Rv 358 (360)
.+.. ++ .++ .| |++.|+||.++| |.++
T Consensus 182 ~~~~-----pl-----~~g---~D---ivv~S~sK~l~g~g~~~ 209 (380)
T TIGR01325 182 VLQQ-----PL-----KLG---AD---VVVYSATKHIDGQGRVM 209 (380)
T ss_pred ccCC-----ch-----hhC---CC---EEEeeccceecCCCCeE
Confidence 4322 11 111 23 788899999987 5666
No 167
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.75 E-value=1.8e-17 Score=162.14 Aligned_cols=193 Identities=14% Similarity=0.137 Sum_probs=134.8
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHc---cCCCC
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI---RSEND 216 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~---~~~gd 216 (360)
-+|.+++++.+.+........ .| ..+....+++.+.+.. ..+++++++|+++|+..+++.+. .++||
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~~-~~-----~~~~~~~la~~l~~~~----~~~~v~~~~sGseA~~~al~~ar~~~~~~G~ 117 (389)
T PRK01278 48 AHPHLVEALKEQAEKLWHVSN-LY-----RIPEQERLAERLVENS----FADKVFFTNSGAEAVECAIKTARRYHYGKGH 117 (389)
T ss_pred CCHHHHHHHHHHHHhcCcccc-cc-----CChHHHHHHHHHHhhC----CCCEEEEcCCcHHHHHHHHHHHHHHHHhcCC
Confidence 478899999888876322111 12 1233445556655432 24689999999999999988762 13666
Q ss_pred ----EEEEcCCCchHHHHHHHHcCCeEEEeecC-C-CCCcC----CCHHHHHHHHHHHHhcCCCccEEEEecCCCCcc-c
Q 018147 217 ----GILCPIPQYPLYSASIALHGGTLVPYYLD-E-ATGWG----LETSEVKKQLEAAKAKGITVRALVVINPGNPTG-Q 285 (360)
Q Consensus 217 ----~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~-~-~~~~~----~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG-~ 285 (360)
+|++.++.|+.+.......+......... + ..++. .|++.+++++++ ++++|+++.++||+| .
T Consensus 118 ~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~avivep~~~~~G~~ 191 (389)
T PRK01278 118 PERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITP------NTAAILIEPIQGEGGIR 191 (389)
T ss_pred CCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCC------CeEEEEEecccCCCCCc
Confidence 89999999998877666655443222110 0 11122 589999998865 788888887788888 7
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 286 ~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
+++.+.+++|.++|++||+++|+||+|.++.+.+. ..... . .++ .+| +.+|||++++|+|+||
T Consensus 192 ~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~--~~~~~-~-~~~---~pd-----i~t~sK~l~~G~~ig~ 254 (389)
T PRK01278 192 PAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGK--LFAHE-W-AGV---TPD-----IMAVAKGIGGGFPLGA 254 (389)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc--ceeec-c-cCC---CCC-----EEEEehhccCCcceEE
Confidence 88999999999999999999999999999766553 21111 1 011 144 3589999999999998
No 168
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.75 E-value=3.6e-17 Score=160.80 Aligned_cols=210 Identities=16% Similarity=0.121 Sum_probs=142.5
Q ss_pred CCccccCcc----CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 018147 128 PSILDRSET----QGL-FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (360)
Q Consensus 128 p~~l~~~~~----~~~-~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~a 202 (360)
.+++|+..+ ..+ .++.+++++.+.+... ..|....+..++...+++.+.+.+|. ..+++++++|+++|
T Consensus 36 ~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~sgsea 108 (413)
T cd00610 36 NRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKL-----THFSLGFFYNEPAVELAELLLALTPE--GLDKVFFVNSGTEA 108 (413)
T ss_pred CEEEEcCccHHhhccCCCCHHHHHHHHHHHHhC-----cCccCcccCCHHHHHHHHHHHHhCCC--CCCEEEEcCcHHHH
Confidence 345555543 223 6888999998888653 23444334566777777777776653 57899999999999
Q ss_pred HHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHcC-------------CeEEEeecCCC----CCcCCCHHHHHHHHHHH
Q 018147 203 VHMMMQLLIR-SENDGILCPIPQYPLYSASIALHG-------------GTLVPYYLDEA----TGWGLETSEVKKQLEAA 264 (360)
Q Consensus 203 l~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~g-------------~~~~~v~~~~~----~~~~~d~~~L~~~i~~~ 264 (360)
+..+++.+.. .+++.|++.+++|..+.......+ ..++.+|.+.. ..+..|++.|++.+++.
T Consensus 109 ~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 188 (413)
T cd00610 109 VEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH 188 (413)
T ss_pred HHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC
Confidence 9999998741 368999999999998655443322 23455555421 12455889998888642
Q ss_pred HhcCCCccEEEEecC-CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceE
Q 018147 265 KAKGITVRALVVINP-GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISL 342 (360)
Q Consensus 265 ~~~g~~~k~iil~~P-~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 342 (360)
..+++ +++++| +|++|.++ +.+.+++|.++|+++|+++|+||+|.++...+. ...+ .. . +..+|
T Consensus 189 ---~~~~~-~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~--~~~~-~~---~-~~~~d--- 254 (413)
T cd00610 189 ---PEEVA-AVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGK--MFAF-EH---F-GVEPD--- 254 (413)
T ss_pred ---CCCEE-EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc--hhhH-hh---c-CCCCC---
Confidence 11344 444555 66779876 677799999999999999999999998644332 1111 11 1 11234
Q ss_pred EEEeccCcCccccccccC
Q 018147 343 VSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 343 i~~~S~SK~~~g~~RvGw 360 (360)
+.||||++++|+|+||
T Consensus 255 --~~t~sK~l~~g~~~g~ 270 (413)
T cd00610 255 --IVTLGKGLGGGLPLGA 270 (413)
T ss_pred --eEEEcccccCccccEE
Confidence 3589999999999998
No 169
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.75 E-value=3.2e-17 Score=140.09 Aligned_cols=164 Identities=15% Similarity=0.130 Sum_probs=127.0
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHH-HHHHHcCCeEEEeecCCC
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS-ASIALHGGTLVPYYLDEA 247 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~-~~~~~~g~~~~~v~~~~~ 247 (360)
+.++++.+++++. .+.+++++++|+++|+..++..+.. ++++|+++.+.|+... ..+...|++++.++.+..
T Consensus 2 ~~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 74 (170)
T cd01494 2 LEELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLG-PGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDA 74 (170)
T ss_pred HHHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhCC-CCCEEEEeecccceehhhHHHhcCCEEEEeccCCC
Confidence 3578888888872 5678999999999999999999984 8999999999999888 888889999999988765
Q ss_pred CCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHH
Q 018147 248 TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFK 327 (360)
Q Consensus 248 ~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~ 327 (360)
.....+.+.+++... ..+++++++++|+||+|...+ .++|.++|+++|+++|+|++|..+...... .
T Consensus 75 ~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~-----~ 141 (170)
T cd01494 75 GYGGLDVAILEELKA-----KPNVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPG-----V 141 (170)
T ss_pred Cccchhhhhhhhccc-----cCceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccc-----c
Confidence 433333334443322 237899999999999999988 588889999999999999999997665421 0
Q ss_pred HHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 328 KVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
.. .. .+ ..+++.|++|.|++ -++||
T Consensus 142 ~~-~~-----~~-~d~~~~s~~K~~~~-~~~G~ 166 (170)
T cd01494 142 LI-PE-----GG-ADVVTFSLHKNLGG-EGGGV 166 (170)
T ss_pred cc-cc-----cc-CCEEEEEcccccCC-CceEE
Confidence 00 10 11 23788999999988 78876
No 170
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.75 E-value=6.3e-17 Score=158.94 Aligned_cols=199 Identities=12% Similarity=0.025 Sum_probs=145.3
Q ss_pred cccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH
Q 018147 131 LDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL 210 (360)
Q Consensus 131 l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l 210 (360)
+-+..+|...|+.+++++.+.. ..|. ..+..++++++++.+.+.+|.+ ..+.+++++|+++++..++..+
T Consensus 11 ~l~~pGP~~~~~~V~~a~~~~~--------~~~~-~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~ 80 (401)
T PLN02409 11 HLFVPGPVNIPERVLRAMNRPN--------EDHR-SPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNT 80 (401)
T ss_pred eeccCCCCCCCHHHHHHhcCCC--------CCCC-CHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhc
Confidence 3455667777888887764321 1222 3457889999999998888853 2346788889999999999888
Q ss_pred ccCCCCEEEEcCCCchHH--HHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCC
Q 018147 211 IRSENDGILCPIPQYPLY--SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (360)
Q Consensus 211 ~~~~gd~Vlv~~P~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~ 288 (360)
+ ++||+|++.++.|..+ ...++.+|++++.++.+.+. .+|++++++++++. ...++++|++++++||||.+++
T Consensus 81 ~-~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~--~~~~~~l~~~l~~~--~~~~~k~v~~~~~~~~tG~~~~ 155 (401)
T PLN02409 81 L-SPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQ--GADLDILKSKLRQD--TNHKIKAVCVVHNETSTGVTND 155 (401)
T ss_pred C-CCCCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCC--CCCHHHHHHHHhhC--cCCCccEEEEEeecccccccCC
Confidence 8 4999999999988654 56778889999999987542 57999999998751 0016899999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 289 ~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
.+++.++++ |+++|+++|+|+++.-... ...+ ..++ -| +++.|.+|.|++..++||
T Consensus 156 ~~~i~~l~~-~~~~g~~~vvD~v~s~g~~-----~id~----~~~~---~D---~~~~s~~K~l~~P~G~G~ 211 (401)
T PLN02409 156 LAGVRKLLD-CAQHPALLLVDGVSSIGAL-----DFRM----DEWG---VD---VALTGSQKALSLPTGLGI 211 (401)
T ss_pred HHHHHHHHh-hhccCcEEEEEcccccCCc-----cccc----cccC---cc---EEEEcCccccCcCCCcce
Confidence 555555544 9999999999999873111 1111 1111 12 666777999987667887
No 171
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.75 E-value=3.3e-17 Score=160.75 Aligned_cols=157 Identities=16% Similarity=0.200 Sum_probs=124.8
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCC----CchHHHHHHHHc
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIP----QYPLYSASIALH 235 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P----~y~~~~~~~~~~ 235 (360)
...|+.+. ..+|++.+|++. | .++.+++++++.|+..++.+++ .+||+|+++.. +|..+...++..
T Consensus 64 Y~r~~~p~-~~~le~~lA~l~----g----~~~al~~~sG~~Ai~~~l~all-~~Gd~Vl~~~~~~~~t~~~~~~~~~~~ 133 (403)
T PRK07810 64 YSRYGNPT-VSMFEERLRLIE----G----AEACFATASGMSAVFTALGALL-GAGDRLVAARSLFGSCFVVCNEILPRW 133 (403)
T ss_pred eeCCCCch-HHHHHHHHHHHh----C----CCcEEEECChHHHHHHHHHHHh-CCCCEEEEccCCcchHHHHHHHHHHHc
Confidence 44566655 788888888886 2 3478888888899999998888 49999998874 445566677888
Q ss_pred CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 018147 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (360)
Q Consensus 236 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~ 315 (360)
|++++.++. .|++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...
T Consensus 134 G~~v~~vd~-------~d~~~l~~ai~~------~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~ 197 (403)
T PRK07810 134 GVETVFVDG-------EDLSQWEEALSV------PTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATP 197 (403)
T ss_pred CcEEEEECC-------CCHHHHHHhcCc------CceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCcc
Confidence 999998863 278999999876 7999999999999999997 999999999999999999999875
Q ss_pred ccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc-cccc
Q 018147 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFS 358 (360)
Q Consensus 316 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~Rv 358 (360)
.+... + .++ .| |+++|++|.++| |.++
T Consensus 198 ~~~~~-----~-----~~g---aD---ivv~S~tK~l~g~g~~~ 225 (403)
T PRK07810 198 LLQRG-----L-----PLG---AD---VVVYSGTKHIDGQGRVL 225 (403)
T ss_pred ccCCh-----h-----hcC---Cc---EEEccCCceecCCcCce
Confidence 44321 1 111 23 789999999986 6676
No 172
>PRK14012 cysteine desulfurase; Provisional
Probab=99.75 E-value=3.7e-17 Score=160.71 Aligned_cols=158 Identities=15% Similarity=0.214 Sum_probs=122.8
Q ss_pred CCCHHHHHHHHHHHH--cCCCCCCCC------CCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH
Q 018147 139 LFSADSIERAWQILD--QIPGRATGA------YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL 210 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~--~~~~~~~~~------Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l 210 (360)
.+|+.+++++.+.+. .... .... +.......++|+.+++++ ++++++|++++|+++++..++.++
T Consensus 14 ~~~~~v~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~ia~~~------g~~~~~v~~~~g~t~al~~~l~~l 86 (404)
T PRK14012 14 PVDPRVAEKMMPYLTMDGTFG-NPASRSHRFGWQAEEAVDIARNQIADLI------GADPREIVFTSGATESDNLAIKGA 86 (404)
T ss_pred CCCHHHHHHHHHHHHhcccCc-CCCchhhHHHHHHHHHHHHHHHHHHHHc------CcCcCeEEEeCCHHHHHHHHHHHH
Confidence 568888888877775 2111 0111 111123556677777776 456788999999999999988776
Q ss_pred c---cCCCCEEEEcCCCchHHHHHHH---HcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcc
Q 018147 211 I---RSENDGILCPIPQYPLYSASIA---LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (360)
Q Consensus 211 ~---~~~gd~Vlv~~P~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG 284 (360)
. ..+||+|+++.++|+.+...++ ..|++++.++.+++ +.+|+++|++++++ +++++++++++||||
T Consensus 87 ~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~--g~~d~~~l~~~i~~------~t~lv~~~~~~n~tG 158 (404)
T PRK14012 87 AHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSN--GIIDLEKLEAAMRD------DTILVSIMHVNNEIG 158 (404)
T ss_pred HHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCC--CcCCHHHHHHhcCC------CCEEEEEECcCCCcc
Confidence 4 2489999999999987755443 45999999988743 57899999999976 789999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 285 ~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
.+.+ +++|.++|+++|+++|+|+++..
T Consensus 159 ~~~~---~~~I~~la~~~g~~vivD~a~~~ 185 (404)
T PRK14012 159 VIQD---IAAIGEICRERGIIFHVDAAQSV 185 (404)
T ss_pred chhh---HHHHHHHHHHcCCEEEEEcchhc
Confidence 9998 88999999999999999999864
No 173
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.74 E-value=1e-16 Score=156.22 Aligned_cols=162 Identities=15% Similarity=0.234 Sum_probs=125.9
Q ss_pred CCCHHHHHHHHHHHHcCCC--CCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHc-----
Q 018147 139 LFSADSIERAWQILDQIPG--RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI----- 211 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~--~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~----- 211 (360)
..++.+++++.+.+.+... ...+.|+. .+...++++++++... .|. .++++|++|+|+++++..+++++.
T Consensus 10 ~~~~~v~~~~~~~~~~~~~n~~~~~~~~~-~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal~~~~~~~~~~~~~ 86 (382)
T TIGR03403 10 MLDPKVKELMDPFFCDIYGNPNSLHQFGT-ATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESNNWVLKGVYFDEIL 86 (382)
T ss_pred CCCHHHHHHHHHHHHhcCcCCccccHHHH-HHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHHHHHHHHHHHhhcc
Confidence 4577899998887765321 12334443 4577888888888753 231 267899999999999999998763
Q ss_pred cCCCCEEEEcCCCchHHHHH---HHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCC
Q 018147 212 RSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (360)
Q Consensus 212 ~~~gd~Vlv~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~ 288 (360)
...+++|+++...|+.+... ++..|++++.++++++ +.+|++++++++++ +++++++++|+||||.+++
T Consensus 87 ~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~--g~~d~~~l~~~i~~------~t~lv~~~~~~n~tG~~~~ 158 (382)
T TIGR03403 87 KGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQ--GTITAEQVREAITE------KTALVSVMWANNETGMIFP 158 (382)
T ss_pred cCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCC--CCCCHHHHHHhccc------CCeEEEEEcccCCCccccC
Confidence 22357899998777765543 5568999999998754 47899999999876 7899999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 289 EENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 289 ~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
+++|.++|+++|+++|+|+++..
T Consensus 159 ---~~~I~~la~~~g~~~ivD~a~~~ 181 (382)
T TIGR03403 159 ---IKEIGEICKERGVLFHTDAVQAI 181 (382)
T ss_pred ---HHHHHHHHHHcCCEEEEechhhc
Confidence 77889999999999999999764
No 174
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.74 E-value=6.2e-17 Score=158.13 Aligned_cols=159 Identities=14% Similarity=0.177 Sum_probs=117.5
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHH----c
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----H 235 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~----~ 235 (360)
...|+.+. ..+|++.+|+++ | .++.+++++++.|+..++.+++ .+||+|+++.|.|......+.. .
T Consensus 55 y~r~~~pt-~~~Le~~lA~l~----G----~~~al~~~sG~~Ai~~~l~al~-~~Gd~Vv~~~~~y~~~~~~~~~~~~~~ 124 (386)
T PRK06767 55 YSRLGNPT-VKLFEERMAVLE----G----GEEALAFGSGMAAISATLIGFL-KAGDHIICSNGLYGCTYGFLEVLEEKF 124 (386)
T ss_pred ccCCCCcc-hHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEcCCcHHHHHHHHHHHHhhc
Confidence 34455554 688899998887 3 2344555555789999998888 4999999999988876554433 4
Q ss_pred CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 018147 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (360)
Q Consensus 236 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~ 315 (360)
|.++..++ ..|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...
T Consensus 125 gi~~~~~~-------~~d~~~l~~~i~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~ 188 (386)
T PRK06767 125 MITHSFCD-------METEADIENKIRP------NTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSP 188 (386)
T ss_pred CeEEEEeC-------CCCHHHHHHhhCc------CceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCccc
Confidence 55554443 2378999998876 7999999999999999998 888999999999999999999753
Q ss_pred ccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc-cccc-cC
Q 018147 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFS-KW 360 (360)
Q Consensus 316 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~Rv-Gw 360 (360)
.+.. ++ ..+ .| ++++|+||.++| |.|+ ||
T Consensus 189 ~~~~-----pl-----~~g---~D---iv~~S~sK~l~g~g~~~gG~ 219 (386)
T PRK06767 189 YLQR-----PL-----ELG---CD---AVVHSATKYIGGHGDVVAGV 219 (386)
T ss_pred ccCC-----ch-----hcC---Cc---EEEecCcceecCCCCceeEE
Confidence 3321 11 011 13 788999999976 7775 64
No 175
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.73 E-value=1.2e-16 Score=155.50 Aligned_cols=150 Identities=17% Similarity=0.243 Sum_probs=121.0
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEE
Q 018147 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (360)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv 220 (360)
..+.++++.+.+.... .| |...+++++++++++.+| .+++++++|+++|+.+++.++..++||+|++
T Consensus 10 ~~~~~~~~~~~l~~~~-----~~----g~~~~~~~~e~~la~~~g----~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv 76 (375)
T PRK11706 10 VGTELDYIQQAMSSGK-----LC----GDGGFTRRCQQWLEQRFG----SAKVLLTPSCTAALEMAALLLDIQPGDEVIM 76 (375)
T ss_pred CHHHHHHHHHHHHcCC-----cc----CCCHHHHHHHHHHHHHhC----CCeEEEECCHHHHHHHHHHHhCCCCCCEEEE
Confidence 4555666666665421 12 234567777777776655 4689999999999999887663259999999
Q ss_pred cCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHH
Q 018147 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (360)
Q Consensus 221 ~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~ 300 (360)
+.|+|+.+...+...|++++.++++++ +|.+|++++++++++ ++|+|+++| ++|...+ +++|.++|+
T Consensus 77 ~~~t~~~~~~~~~~~G~~~v~~d~d~~-~~~~d~~~le~~i~~------~tk~i~~~~---~~G~~~~---~~~i~~la~ 143 (375)
T PRK11706 77 PSYTFVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIEAAITP------KTRAIVPVH---YAGVACE---MDTIMALAK 143 (375)
T ss_pred CCCCcHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhcCC------CCeEEEEeC---CCCCccC---HHHHHHHHH
Confidence 999999999999999999999999865 578999999999876 789988764 6898766 789999999
Q ss_pred HcCCEEEEccCCCCCc
Q 018147 301 KEGLVLLADEVYQENV 316 (360)
Q Consensus 301 ~~~i~lI~DeaY~~~~ 316 (360)
++|++||+|++|+...
T Consensus 144 ~~~i~vIeD~a~a~g~ 159 (375)
T PRK11706 144 KHNLFVVEDAAQGVMS 159 (375)
T ss_pred HcCCEEEEECcccccc
Confidence 9999999999998865
No 176
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=5.1e-17 Score=158.33 Aligned_cols=153 Identities=16% Similarity=0.180 Sum_probs=118.8
Q ss_pred CCCCCC--cCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHH----HHH
Q 018147 161 GAYSHS--QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IAL 234 (360)
Q Consensus 161 ~~Y~~~--~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~----~~~ 234 (360)
..|+.. .....|++.+|++. | .+++++++|+++|+..++.++++ +||+|++++|.|.++... +..
T Consensus 53 ~~Y~r~~npt~~~Le~~iA~le----~----~~~~~~~~sG~~Ai~~~l~all~-~GD~Vvv~~~~Y~~t~~l~~~~l~~ 123 (394)
T PRK09028 53 MFYGRRGTPTHFAFQAAIVELE----G----GAGTALYPSGAAAISNALLSFLK-AGDHLLMVDSCYEPTRDLCDKILKG 123 (394)
T ss_pred ceecCCCCchHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhC-CCCEEEEECCCcHHHHHHHHHhhhh
Confidence 346652 34579999999885 1 25789999999999999999984 999999999999877653 345
Q ss_pred cCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 235 HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 235 ~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
.|.++..++.. +.+.+++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|..
T Consensus 124 ~Gi~v~~v~~~-------~~e~l~~~l~~------~TklV~lespsNPtg~v~d---l~~I~~la~~~g~~lvvD~t~a~ 187 (394)
T PRK09028 124 FGIETTYYDPM-------IGEGIRELIRP------NTKVLFLESPGSITMEVQD---VPTLSRIAHEHDIVVMLDNTWAS 187 (394)
T ss_pred cceEEEEECCC-------CHHHHHHhcCc------CceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCccc
Confidence 68887766432 45778888766 7999999999999988754 99999999999999999999986
Q ss_pred CccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 315 NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 315 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
.+... ++ .++ -| |+++|.+|.++|
T Consensus 188 p~~~~-----Pl-----~~G---aD---ivv~S~tK~l~G 211 (394)
T PRK09028 188 PINSR-----PF-----EMG---VD---ISIQAATKYIVG 211 (394)
T ss_pred cccCC-----cc-----ccC---ce---EEEEeCCeEecC
Confidence 33211 11 122 23 899999998876
No 177
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.73 E-value=2.7e-16 Score=154.85 Aligned_cols=199 Identities=13% Similarity=0.061 Sum_probs=134.9
Q ss_pred CccccCcc---CCCCCHHHHHHHHHHHHcCCCC---CCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 018147 129 SILDRSET---QGLFSADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (360)
Q Consensus 129 ~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~---~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~a 202 (360)
+++++..+ +...++.+++++.+.+...... ....|+......+|++.+|+++ | .++.|++++|+ ++
T Consensus 47 ~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~----g---~~~~i~~~sG~-~a 118 (410)
T PRK13392 47 RVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH----G---KESALLFTSGY-VS 118 (410)
T ss_pred eEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh----C---CCCEEEECcHH-HH
Confidence 35555555 6677999999998888764310 0112333323567788887776 4 25677778775 56
Q ss_pred HHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCC
Q 018147 203 VHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN 281 (360)
Q Consensus 203 l~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~N 281 (360)
...++..+.. .+||.|++....|..+...++..|+++..++.. |.+.+++.++.. ...++++|++++|+|
T Consensus 119 ~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~--~~~~t~~v~i~~~~n 189 (410)
T PRK13392 119 NDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-------DLADLEEQLASV--DPDRPKLIAFESVYS 189 (410)
T ss_pred HHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhc--cCCCCEEEEEeCCCC
Confidence 6666666642 378988888778888877888889987766421 456666666532 112688999999999
Q ss_pred CcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 282 PTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 282 PTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
|||.+.+ +++|.++|+++|+++|+||+|....++.. ...+... .++. ++ -.|+++||||+|+.
T Consensus 190 ~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~--g~g~~~~-~~~~---~~-~div~~tlsK~~g~ 252 (410)
T PRK13392 190 MDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGAR--GGGIAER-DGLM---DR-IDMIQGTLAKAFGC 252 (410)
T ss_pred CCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCC--CCchhhh-ccCC---CC-CcEEEEEChHhhhc
Confidence 9999998 88999999999999999999995555432 2222211 1111 11 12788999998854
No 178
>PLN02483 serine palmitoyltransferase
Probab=99.73 E-value=2.4e-16 Score=158.24 Aligned_cols=186 Identities=15% Similarity=0.126 Sum_probs=129.8
Q ss_pred HHHHHHHHHHcCCC---CCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEE
Q 018147 144 SIERAWQILDQIPG---RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (360)
Q Consensus 144 v~~~~~~~l~~~~~---~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv 220 (360)
..+++.+.+.+.+. .....|+...+..++++.+|+++. .++.|++++|....+ .++.+++ ++||.|++
T Consensus 120 ~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-------~~~ai~~~~G~~an~-~~i~al~-~~Gd~Vi~ 190 (489)
T PLN02483 120 CTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-------KPAAIVFGMGYATNS-TIIPALI-GKGGLIIS 190 (489)
T ss_pred HHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-------CCcEEEECCHHHHHH-HHHHHhC-CCCCEEEE
Confidence 34444444444321 134458888889999999999982 356788888755544 6677787 59999999
Q ss_pred cCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcC-CC-----ccEEEEecC-CCCcccCCCHHHHH
Q 018147 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG-IT-----VRALVVINP-GNPTGQVLAEENQR 293 (360)
Q Consensus 221 ~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g-~~-----~k~iil~~P-~NPTG~~~~~~~l~ 293 (360)
+.|+|+.+...++..|++++.++.. |++.+++.+++....+ ++ .++++++++ .|++|.+.+ ++
T Consensus 191 d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~---l~ 260 (489)
T PLN02483 191 DSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK---LP 260 (489)
T ss_pred cchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccC---HH
Confidence 9999999999999999999998753 4677777776432211 12 366777755 699999887 99
Q ss_pred HHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 294 ~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
+|+++|+++|+++|+||+|....++.. ...+.... ++.. .+ ..|+++||||+|++
T Consensus 261 ~I~~la~~~~~~livDEa~s~g~~G~~--G~g~~~~~-~v~~--~~-~dI~~~SfSKs~g~ 315 (489)
T PLN02483 261 EIVAVCKKYKAYVYLDEAHSIGAVGKT--GRGVCELL-GVDP--AD-VDIMMGTFTKSFGS 315 (489)
T ss_pred HHHHHHHHcCCEEEEECcCccCccCCC--CCchHHhc-CCCc--cc-CcEEEEecchhccc
Confidence 999999999999999999985433321 11121211 1110 12 46899999999864
No 179
>PRK05939 hypothetical protein; Provisional
Probab=99.73 E-value=7.4e-17 Score=157.87 Aligned_cols=148 Identities=16% Similarity=0.175 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHH---HHHHHcCCeEEEeecCCC
Q 018147 171 GLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEA 247 (360)
Q Consensus 171 ~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~---~~~~~~g~~~~~v~~~~~ 247 (360)
.|.+.+|++. | .+..+++++++.|+..++.+++ ++||+|+++.+.|+.+. ..++..|++++.++..
T Consensus 51 ~lE~~la~le----g----~~~~v~~ssG~~Ai~~~l~all-~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-- 119 (397)
T PRK05939 51 ALEAKITKME----G----GVGTVCFATGMAAIAAVFLTLL-RAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-- 119 (397)
T ss_pred HHHHHHHHHh----C----CCeEEEeCCHHHHHHHHHHHHc-CCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC--
Confidence 7777787775 2 2334555555899999999888 49999999999997543 3566789999888652
Q ss_pred CCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC-ccCCCCCCCCH
Q 018147 248 TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN-VYVPEKKFHSF 326 (360)
Q Consensus 248 ~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~-~~~~~~~~~s~ 326 (360)
|++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|... .++..
T Consensus 120 -----d~e~l~~~l~~------~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~~~------ 179 (397)
T PRK05939 120 -----DVQNVAAAIRP------NTRMVFVETIANPGTQVAD---LAGIGALCRERGLLYVVDNTMTSPWLFRPK------ 179 (397)
T ss_pred -----CHHHHHHhCCC------CCeEEEEECCCCCCCCHHh---HHHHHHHHHHcCCEEEEECCcccccccCcc------
Confidence 78999998876 7999999999999999854 999999999999999999998642 12110
Q ss_pred HHHHHhhCCCCCCceEEEEeccCcCccc-cccccC
Q 018147 327 KKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFSKW 360 (360)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~RvGw 360 (360)
.++ .-|+++|+||.++| |.++||
T Consensus 180 -----~~g------aDivv~S~sK~~~g~g~~igg 203 (397)
T PRK05939 180 -----DVG------ASLVINSLSKYIAGHGNALGG 203 (397)
T ss_pred -----ccC------CEEEEecCeecccCCCCeEEE
Confidence 111 24899999999987 888876
No 180
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.72 E-value=9e-17 Score=155.89 Aligned_cols=155 Identities=16% Similarity=0.183 Sum_probs=116.7
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHH----HHc
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALH 235 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~----~~~ 235 (360)
...|+.+ ...+|++++|++. .++.++++++++|+..++.+++ ++||+|+++.|.|..+...+ +..
T Consensus 45 y~ry~~p-~~~~Le~~lA~l~---------~~~~v~~~sG~~Ai~~~l~all-~~Gd~Vl~~~~~y~~~~~~~~~~l~~~ 113 (366)
T PRK07582 45 YGRASNP-TWRALEAALGELE---------GAEALVFPSGMAAITAVLRALL-RPGDTVVVPADGYYQVRALAREYLAPL 113 (366)
T ss_pred eECCCCc-cHHHHHHHHHHHc---------CCCEEEECCHHHHHHHHHHHhc-CCCCEEEEeCCCcHhHHHHHHHHHhcC
Confidence 4456554 4899999999885 2345556666789999999888 49999999999998886644 447
Q ss_pred CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 018147 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (360)
Q Consensus 236 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~ 315 (360)
|++++.++.+++ .+ .+.+ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|...
T Consensus 114 G~~v~~v~~~~~------~~----~~~~------~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~ 174 (366)
T PRK07582 114 GVTVREAPTAGM------AE----AALA------GADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATP 174 (366)
T ss_pred eEEEEEECCCCh------HH----Hhcc------CceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCc
Confidence 999999886532 11 1222 6899999999999998877 999999999999999999999642
Q ss_pred ccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc--cccccC
Q 018147 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF--HFFSKW 360 (360)
Q Consensus 316 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g--~~RvGw 360 (360)
.+. .++ +++ .| ++++|+||.++| |+|+||
T Consensus 175 --~~~---~p~-----~~g---~D---ivv~S~sK~l~G~~g~~~G~ 205 (366)
T PRK07582 175 --LGQ---RPL-----ELG---AD---LVVASDTKALTGHSDLLLGY 205 (366)
T ss_pred --ccc---Cch-----hcC---Cc---EEEecccccccCCCCeeEEE
Confidence 121 111 111 23 788999999876 799997
No 181
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=1.6e-16 Score=156.99 Aligned_cols=151 Identities=18% Similarity=0.201 Sum_probs=119.3
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchH----HHHHHHHcCCeEEEeec
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALHGGTLVPYYL 244 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~v~~ 244 (360)
...|.+.+|++. | .+..++++|+++|+..++..++ .+||+|+++.+.|+. +...++..|++++.++.
T Consensus 66 ~~~Le~~lA~le----g----~~~al~~~sG~~Ai~~al~~ll-~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~ 136 (431)
T PRK08248 66 TDVFEKRIAALE----G----GIGALAVSSGQAAITYSILNIA-SAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP 136 (431)
T ss_pred HHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC
Confidence 566777777765 3 4678889999999999998888 499999999998864 34556778999998875
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~ 324 (360)
.|++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..- +. ..
T Consensus 137 -------~d~e~l~~ai~~------~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~-~~----~~ 195 (431)
T PRK08248 137 -------SDPENFEAAITD------KTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASP-YL----LR 195 (431)
T ss_pred -------CCHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCcc-cc----CC
Confidence 278999998876 7999999999999999999 789999999999999999998631 11 11
Q ss_pred CHHHHHHhhCCCCCCceEEEEeccCcCccc-cccccC
Q 018147 325 SFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFSKW 360 (360)
Q Consensus 325 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~RvGw 360 (360)
++ .++ . -|+++|++|.++| |.++|+
T Consensus 196 pl-----~~g---a---Divv~S~tK~lgg~g~~~Gg 221 (431)
T PRK08248 196 PI-----EHG---A---DIVVHSATKFIGGHGTSIGG 221 (431)
T ss_pred hh-----HcC---C---CEEEEcCccccCCCCCceEE
Confidence 11 111 2 3888999999987 778763
No 182
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=2.9e-16 Score=154.44 Aligned_cols=150 Identities=15% Similarity=0.163 Sum_probs=119.1
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHH----HHHcCCeEEEeec
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALHGGTLVPYYL 244 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~----~~~~g~~~~~v~~ 244 (360)
...|.+.+|++. | .+..+++++++.|+.+++.+++ .+||+|+++.+.|...... +...|+++..+..
T Consensus 63 v~~lE~~la~le----g----~~~av~~~SG~aAi~~al~all-~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 63 LAAFEQKLAELE----G----GVGAVATASGQAAIMLAVLNIC-SSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred HHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHhc-CCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 677777887776 2 3457889999999999999888 4999999999999865554 6778999988843
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~ 324 (360)
.+|+++++++|++ ++|+|++.+|+||++.+.+ +++|+++|+++|+++|+|++|..-.+..
T Consensus 134 ------~~d~~~l~~~I~~------~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~~~~----- 193 (432)
T PRK06702 134 ------NLTADEIVALAND------KTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPYLCQ----- 193 (432)
T ss_pred ------CCCHHHHHHhCCc------CCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchhhCC-----
Confidence 4689999999987 8999999999999999999 9999999999999999999985311111
Q ss_pred CHHHHHHhhCCCCCCceEEEEeccCcCcc------ccccc
Q 018147 325 SFKKVSRSMGYGEKDISLVSFQSVSKGRY------FHFFS 358 (360)
Q Consensus 325 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~------g~~Rv 358 (360)
+ + ..+ -| |+++|+||.++ ||+++
T Consensus 194 p---l--~~G---AD---Ivv~S~TKy~~Ghsd~l~G~v~ 222 (432)
T PRK06702 194 A---F--EHG---AN---IIVHSTTKYIDGHASSLGGIVI 222 (432)
T ss_pred h---h--hcC---CC---EEEEccccccCCCcceeceEEE
Confidence 1 1 111 12 89999999544 46665
No 183
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.72 E-value=1.7e-16 Score=154.79 Aligned_cols=146 Identities=16% Similarity=0.219 Sum_probs=115.2
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHH---HcCCeEEEeec
Q 018147 168 GIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---LHGGTLVPYYL 244 (360)
Q Consensus 168 G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~---~~g~~~~~v~~ 244 (360)
...+|++.+|+++ | .+++++++|+++|+..++..++. +||+|+++.|.|..+...++ ..|+++..+
T Consensus 54 ~~~~lE~~lA~l~----g----~~~~l~~~sG~~Ai~~~l~~ll~-~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~-- 122 (385)
T PRK08574 54 TLRPLEEALAKLE----G----GVDALAFNSGMAAISTLFFSLLK-AGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLA-- 122 (385)
T ss_pred cHHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHHhC-CCCEEEEcCCCchhHHHHHHHhhccCcEEEEE--
Confidence 3788999999987 2 35788889999999999998884 99999999999998776653 457776654
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~ 324 (360)
.+|++++++++++. ++|+|++++|+||||.+++ +++|+++|+++|+++|+|++|.......
T Consensus 123 ------~~d~~~l~~~i~~~-----~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~----- 183 (385)
T PRK08574 123 ------YPSTEDIIEAIKEG-----RTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLYR----- 183 (385)
T ss_pred ------CCCHHHHHHhcCcc-----CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccCC-----
Confidence 23678888887642 6899999999999999999 8899999999999999999996432211
Q ss_pred CHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 325 SFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 325 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
++ ..+ . -+++.|+||.++|
T Consensus 184 ~l-----~~G---a---Divv~S~sK~l~g 202 (385)
T PRK08574 184 PL-----RHG---A---DFVVHSLTKYIAG 202 (385)
T ss_pred hh-----hhC---C---cEEEeeCceeecC
Confidence 11 111 1 3889999999875
No 184
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.72 E-value=2.6e-16 Score=153.45 Aligned_cols=152 Identities=15% Similarity=0.203 Sum_probs=124.2
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH-ccCCCCEE
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGI 218 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l-~~~~gd~V 218 (360)
+.++.++++.+.+.+. ...+++ ...+|++++|+++ | .+++++++|+++|+.+++.++ + ++||+|
T Consensus 12 ~~~~e~~~~~~~l~~~----~~~~g~--~~~~le~~la~~~----g----~~~~v~~~sgt~al~lal~al~~-~~Gd~V 76 (379)
T PRK11658 12 MGDEELAAVKEVLRSG----WITTGP--KNQALEQAFCQLT----G----NQHAIAVSSATAGMHITLMALGI-GPGDEV 76 (379)
T ss_pred CCHHHHHHHHHHHHcC----CccCCH--hHHHHHHHHHHHh----C----CCeEEEECCHHHHHHHHHHHcCC-CCCCEE
Confidence 3566677777777652 322333 4799999999998 2 246888999999999999998 6 599999
Q ss_pred EEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHH
Q 018147 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (360)
Q Consensus 219 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~l 298 (360)
+++.++|..+...+...|++++.++++.+ +|.+|++.+++++++ ++|+|+ |.||+|...+ +++|.++
T Consensus 77 iv~~~~~~~~~~~~~~~G~~~v~vd~~~~-~~~~d~~~l~~~i~~------~tkav~---~~~~~G~~~d---~~~i~~~ 143 (379)
T PRK11658 77 ITPSLTWVSTLNMIVLLGATPVMVDVDRD-TLMVTPEAIEAAITP------RTKAII---PVHYAGAPAD---LDAIRAI 143 (379)
T ss_pred EECCCcHHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhccc------CCeEEE---EeCCCCCcCC---HHHHHHH
Confidence 99999999999999999999999998764 478999999999876 788887 5567899877 8899999
Q ss_pred HHHcCCEEEEccCCCC-CccCC
Q 018147 299 CKKEGLVLLADEVYQE-NVYVP 319 (360)
Q Consensus 299 a~~~~i~lI~DeaY~~-~~~~~ 319 (360)
|+++|+++|+|++|.. ..+.+
T Consensus 144 a~~~gi~vi~D~a~a~g~~~~~ 165 (379)
T PRK11658 144 GERYGIPVIEDAAHAVGTYYKG 165 (379)
T ss_pred HHHcCCeEEEECCCccCCeECC
Confidence 9999999999999984 34443
No 185
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.71 E-value=1.8e-16 Score=154.05 Aligned_cols=152 Identities=16% Similarity=0.204 Sum_probs=120.4
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHH----HHHHcCCeEEEee
Q 018147 168 GIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHGGTLVPYY 243 (360)
Q Consensus 168 G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~ 243 (360)
-..+|++.++++. | .++.++++++++|+..++.+++. +||+|+++.+.|..... .++..|+++..++
T Consensus 41 ~~~~le~~la~l~----g----~~~a~~~~sG~~Ai~~~l~~l~~-~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 111 (369)
T cd00614 41 TVDALEKKLAALE----G----GEAALAFSSGMAAISTVLLALLK-AGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVD 111 (369)
T ss_pred hHHHHHHHHHHHH----C----CCCEEEEcCHHHHHHHHHHHHcC-CCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeC
Confidence 3678888888876 3 25677788889999999999984 99999999999987543 3456788888876
Q ss_pred cCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCC
Q 018147 244 LDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKF 323 (360)
Q Consensus 244 ~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~ 323 (360)
.+ |++++++++++ ++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|++|....+...
T Consensus 112 ~~-------d~~~l~~~i~~------~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~~~--- 172 (369)
T cd00614 112 PD-------DPEALEAAIKP------ETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQRP--- 172 (369)
T ss_pred CC-------CHHHHHHhcCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcCCh---
Confidence 43 58889888865 7999999999999999998 88999999999999999999987544211
Q ss_pred CCHHHHHHhhCCCCCCceEEEEeccCcCccc--cccccC
Q 018147 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGRYF--HFFSKW 360 (360)
Q Consensus 324 ~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g--~~RvGw 360 (360)
+ .++ . -++++|+||.++| +++.||
T Consensus 173 --~-----~~g---~---Divv~S~tK~l~g~~~~~gG~ 198 (369)
T cd00614 173 --L-----ELG---A---DIVVHSATKYIGGHSDVIAGV 198 (369)
T ss_pred --h-----hhC---C---cEEEeccceeccCCCCceEEE
Confidence 1 111 2 3889999999986 477776
No 186
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=3.2e-16 Score=154.65 Aligned_cols=150 Identities=18% Similarity=0.181 Sum_probs=115.5
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHH----cCCeEEEeec
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVPYYL 244 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~----~g~~~~~v~~ 244 (360)
...|++.+|++. | .+..++++++++|+..++.+++. +||+|+++.+.|......+.. .|.++..++
T Consensus 60 ~~~Le~~lA~l~----g----~~~~l~~ssG~~Ai~~al~al~~-~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d- 129 (425)
T PRK06084 60 NDVLEQRVAALE----G----GVGALAVASGMAAITYAIQTIAE-AGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAA- 129 (425)
T ss_pred HHHHHHHHHHHh----C----CCceeEehhHHHHHHHHHHHHhC-CCCEEEEeCCCcchHHHHHHHhcccceeEEEEEC-
Confidence 567777777775 3 24567788888999999999985 999999999999854444332 465655554
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~ 324 (360)
..|++++++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|.......
T Consensus 130 ------~~d~e~le~ai~~------~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~~----- 189 (425)
T PRK06084 130 ------HDDIAALEALIDE------RTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLCR----- 189 (425)
T ss_pred ------CCCHHHHHHHhcc------CCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCC-----
Confidence 2379999999976 7999999999999999998 8999999999999999999998533211
Q ss_pred CHHHHHHhhCCCCCCceEEEEeccCcCccc-ccccc
Q 018147 325 SFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFSK 359 (360)
Q Consensus 325 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~RvG 359 (360)
++ ..+ .| |+++|++|.++| |.++|
T Consensus 190 p~-----~~g---aD---ivv~S~tK~l~G~g~~~g 214 (425)
T PRK06084 190 PF-----EHG---AD---IVVHSLTKYIGGHGTSIG 214 (425)
T ss_pred hh-----hcC---CC---EEEECchhccccccccee
Confidence 11 111 23 899999999976 67666
No 187
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.71 E-value=6.3e-16 Score=153.90 Aligned_cols=124 Identities=17% Similarity=0.241 Sum_probs=103.6
Q ss_pred HHHHHHHH---HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHH----cCCeEEEe
Q 018147 170 KGLRDTIA---AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVPY 242 (360)
Q Consensus 170 ~~lr~~ia---~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~----~g~~~~~v 242 (360)
..++++++ +++.+.+|. +++++++|+|+++++..++.++...+||+|+++.+.|+.|...++. .|++++.+
T Consensus 108 ~g~~~~~~e~~~~la~l~g~--~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v 185 (447)
T PRK00451 108 QGTLQAIFEYQTMICELTGM--DVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEV 185 (447)
T ss_pred hHHHHHHHHHHHHHHHHhCC--CcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEe
Confidence 33666666 444777774 5668999999999999988887424899999999999998887665 69999999
Q ss_pred ecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEE
Q 018147 243 YLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (360)
Q Consensus 243 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~ 308 (360)
+++++ .+|+++|++++++ ++++|++++| ||||.+.+ +++|+++|+++|+++|+
T Consensus 186 ~~~~~---~~d~~~l~~~i~~------~t~~v~l~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv 238 (447)
T PRK00451 186 PYEDG---VTDLEALEAAVDD------DTAAVVVQYP-NFFGVIED---LEEIAEIAHAGGALFIV 238 (447)
T ss_pred cCCCC---CCCHHHHHHhcCC------CeEEEEEECC-CCCCeeCC---HHHHHHHHHHCCCEEEE
Confidence 98753 7899999999876 7999999999 89999977 99999999999999988
No 188
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.70 E-value=7.2e-16 Score=148.70 Aligned_cols=158 Identities=16% Similarity=0.242 Sum_probs=120.2
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCC------cCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHS------QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR 212 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~------~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~ 212 (360)
.+|+.+++++.+.+..... ....+... .-..++|+.+++++ ++++++|++|+|+++++..++..+..
T Consensus 9 ~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~t~a~~~~l~~l~~ 81 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFG-NPSSRTHEFGHNAKKAVERARKQVAEAL------GADTEEVIFTSGATESNNLAILGLAR 81 (353)
T ss_pred CCCHHHHHHHHHHHHhcCC-CCCchhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHH
Confidence 5688899998887754211 01111111 11456777777766 35788999999999999999888752
Q ss_pred ---CCC-CEEEEcCCCchHHHH---HHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCccc
Q 018147 213 ---SEN-DGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (360)
Q Consensus 213 ---~~g-d~Vlv~~P~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~ 285 (360)
.+| +.|++....|+.+.. .++..|++++.++++++ +.+|+++|++++++ ++++|++++++||||.
T Consensus 82 ~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~--~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~ 153 (353)
T TIGR03235 82 AGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDES--GRIDVDELADAIRP------DTLLVSIMHVNNETGS 153 (353)
T ss_pred hcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCC--CcCCHHHHHHhCCC------CCEEEEEEcccCCcee
Confidence 255 778888877775543 44557999999998754 47899999998865 6899999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 286 VLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 286 ~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
+++ +++|.++|+++|+++|+|+++.-
T Consensus 154 ~~~---~~~I~~l~~~~~~~~ivD~a~~~ 179 (353)
T TIGR03235 154 IQP---IREIAEVLEAHEAFFHVDAAQVV 179 (353)
T ss_pred ccC---HHHHHHHHHHcCCEEEEEchhhc
Confidence 998 89999999999999999999764
No 189
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.70 E-value=7.8e-16 Score=147.96 Aligned_cols=190 Identities=15% Similarity=0.073 Sum_probs=131.7
Q ss_pred cCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCC
Q 018147 136 TQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN 215 (360)
Q Consensus 136 ~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~g 215 (360)
+|..+++.+.+++....... ...|. .-...+|+.+++++ |.+-+...|++++|+++++..++..++. +|
T Consensus 6 ~p~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~la~~~----~~~~~~~~i~~~~~gt~~l~~~~~~~~~-~~ 74 (355)
T TIGR03301 6 GPLSTSATVRDAMLVDWCHW----DSEFN--DVTDQVRDRLLALA----GGDDNHTCVLLQGSGTFAVEATIGSLVP-RD 74 (355)
T ss_pred CCCCCCHHHHHHhhhhccCC----CHHHH--HHHHHHHHHHHHHh----cCCCCCcEEEEeCCcHHHHHHHHHhccC-CC
Confidence 34566777777765522110 11232 22456666666665 4332223688899999999999999985 78
Q ss_pred CEEEEcCC-CchH-HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHH
Q 018147 216 DGILCPIP-QYPL-YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQR 293 (360)
Q Consensus 216 d~Vlv~~P-~y~~-~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~ 293 (360)
|+|++..+ .|+. +...++..|.+++.++++.+ +.+|++++++++++. ++++.+++++++||||.+.+ ++
T Consensus 75 ~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~--~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~~G~~~~---~~ 145 (355)
T TIGR03301 75 GKLLVLINGAYGERLAKICEYLGIPHTDLNFSEY--EPPDLNRIEEALAAD----PDITHVATVHHETTTGILNP---LE 145 (355)
T ss_pred CeEEEECCCchhhHHHHHHHHcCCceEEEecCCC--CCCCHHHHHHHHHhC----CCceEEEEEecCCcccchhH---HH
Confidence 88776654 4543 56677889999999988643 588999999998751 25667888899999999987 89
Q ss_pred HHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 294 ~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
+|+++|+++|+++|+|+++.. +.. ..++... + .-+++.|++|.++|..++||
T Consensus 146 ~i~~l~~~~~~~livD~~~s~---g~~--~~~~~~~---------~-~d~~~~s~~K~l~~~~G~g~ 197 (355)
T TIGR03301 146 AIAKVARSHGAVLIVDAMSSF---GAI--PIDIEEL---------D-VDALIASANKCLEGVPGFGF 197 (355)
T ss_pred HHHHHHHHcCCEEEEEecccc---CCc--ccchhhc---------C-ccEEEecCCcccccCCceeE
Confidence 999999999999999986653 221 1222211 1 23778999998876555676
No 190
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.70 E-value=8.9e-16 Score=148.85 Aligned_cols=193 Identities=13% Similarity=0.019 Sum_probs=134.8
Q ss_pred cCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc
Q 018147 133 RSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR 212 (360)
Q Consensus 133 ~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~ 212 (360)
+..+|...++.+.+++.+.... ....|.. -..++|+.+++++ |.+-+.+.|++++|+++++..++..+..
T Consensus 9 ~~pgP~~~~~~~~~a~~~~~~~----~~~~~~~--~~~~~~~~l~~l~----~~~~~~~~i~~~~~gt~~l~~~~~~l~~ 78 (368)
T PRK13479 9 LTPGPLTTSRTVREAMLRDWGS----WDDDFNA--LTASVRAKLVAIA----TGEEGYTCVPLQGSGTFSVEAAIGSLVP 78 (368)
T ss_pred ecCCCCCCCHHHHHHhCCCCCC----CChHHHH--HHHHHHHHHHHHh----CCCCCceEEEEcCCcHHHHHHHHHhccC
Confidence 3445666677777665432210 0111332 3566666666665 4222235688999999999999999985
Q ss_pred CCCCEEEEcCCCchHH--HHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHH
Q 018147 213 SENDGILCPIPQYPLY--SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (360)
Q Consensus 213 ~~gd~Vlv~~P~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~ 290 (360)
+||.|+++.+.|... ...++.+|++++.++++++ +.+|++++++++++. ++++++++++|+||||...+
T Consensus 79 -~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~~--~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~tG~~~~-- 149 (368)
T PRK13479 79 -RDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGED--EPPDAAEVEAALAAD----PRITHVALVHCETTTGILNP-- 149 (368)
T ss_pred -CCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCCC--CCCCHHHHHHHHHhC----CCCcEEEEEcccCccccccC--
Confidence 999999998887665 4777889999999998753 478999999988751 24678999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 291 ~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
+++|.++|+++|+++|+| +|+. ++.. ..++... ..| +++.|++|.+.|...+||
T Consensus 150 -~~~i~~l~~~~~~~livD-a~~~--~g~~--~~~~~~~-------~~d---~~v~s~~K~l~g~~G~G~ 203 (368)
T PRK13479 150 -LDEIAAVAKRHGKRLIVD-AMSS--FGAI--PIDIAEL-------GID---ALISSANKCIEGVPGFGF 203 (368)
T ss_pred -HHHHHHHHHHcCCEEEEE-cccc--cCCc--ccccccc-------Cce---EEEecCccccccCCCceE
Confidence 788999999999999999 5555 3322 1122111 123 566899998765444676
No 191
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.70 E-value=3.5e-16 Score=152.30 Aligned_cols=156 Identities=17% Similarity=0.227 Sum_probs=116.1
Q ss_pred cCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHH----HHHHcCCeEEEe
Q 018147 167 QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHGGTLVPY 242 (360)
Q Consensus 167 ~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v 242 (360)
.+....++.+++.+....| .++.+ +++++++|+..++.++++ +||+|+++.|.|+++.. .++..|+++..+
T Consensus 60 R~gnPt~~~Le~~la~le~---~~~~v-~~sSG~aAi~~~l~all~-~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~v 134 (395)
T PRK05967 60 TRGTPTTDALCKAIDALEG---SAGTI-LVPSGLAAVTVPFLGFLS-PGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYY 134 (395)
T ss_pred CCCChHHHHHHHHHHHHhC---CCCEE-EECcHHHHHHHHHHHhcC-CCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEe
Confidence 3345556666666655433 23444 555578999999999985 99999999999998764 457789988887
Q ss_pred ecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCC
Q 018147 243 YLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKK 322 (360)
Q Consensus 243 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~ 322 (360)
+.. +.+.+++++++ ++|+|++++|+||++.+ .++++|+++|+++|+++|+|++|...++...
T Consensus 135 d~~-------~~e~l~~al~~------~TklV~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~~~~p-- 196 (395)
T PRK05967 135 DPE-------IGAGIAKLMRP------NTKVVHTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPLYFRP-- 196 (395)
T ss_pred CCC-------CHHHHHHhcCc------CceEEEEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCceecCh--
Confidence 532 34778888876 79999999999997654 5699999999999999999999987543321
Q ss_pred CCCHHHHHHhhCCCCCCceEEEEeccCcCccc--ccccc
Q 018147 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF--HFFSK 359 (360)
Q Consensus 323 ~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g--~~RvG 359 (360)
+ +++ -| |+++|.+|.++| +...|
T Consensus 197 ---l-----~~G---aD---ivv~S~tKy~~Gh~d~~~G 221 (395)
T PRK05967 197 ---L-----DFG---VD---ISIHAATKYPSGHSDILLG 221 (395)
T ss_pred ---h-----HcC---CC---EEEEecccccCCCCCeeEE
Confidence 1 122 23 899999999877 44444
No 192
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.69 E-value=1.1e-15 Score=148.70 Aligned_cols=159 Identities=18% Similarity=0.295 Sum_probs=119.6
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCC----CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc--
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSH----SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-- 212 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~----~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-- 212 (360)
.+|+.+++++.+.+.+........+.. ..-+.++|+.+++++ | +++++|++|+|+++++..++..+..
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~i~~t~~~t~a~~~al~~~~~~~ 83 (379)
T TIGR03402 10 RVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLL----G--AEPDEIIFTSGGTESDNTAIKSALAAQ 83 (379)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEeCcHHHHHHHHHHHHHHhc
Confidence 567889998888776431100001110 112345556666655 4 5688999999999999999887641
Q ss_pred CCCCEEEEcCCCchHHHHH---HHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCH
Q 018147 213 SENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (360)
Q Consensus 213 ~~gd~Vlv~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~ 289 (360)
.+||.|++....|+.+... ++..|.+++.++++.+ +.+|++++++++++ +++++++++++||||.+++
T Consensus 84 ~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~--g~~~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~~- 154 (379)
T TIGR03402 84 PEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEE--GRLDLEELRAAITD------DTALVSVMWANNETGTIFP- 154 (379)
T ss_pred CCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCC--CcCCHHHHHHhcCC------CcEEEEEEcccCCeeeccc-
Confidence 3578999999888876543 4446999999988654 46899999999876 7899999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 290 ENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 290 ~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
+++|.++|+++|+++|+|+++..
T Consensus 155 --~~~I~~l~~~~g~~vivD~~~~~ 177 (379)
T TIGR03402 155 --IEEIGEIAKERGALFHTDAVQAV 177 (379)
T ss_pred --HHHHHHHHHHcCCEEEEECcccc
Confidence 67899999999999999999874
No 193
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.69 E-value=6.3e-16 Score=150.58 Aligned_cols=160 Identities=16% Similarity=0.265 Sum_probs=116.6
Q ss_pred CCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHH----HHHHcC
Q 018147 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHG 236 (360)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~----~~~~~g 236 (360)
..|+.. |.+. ++++.+.+.+.+| .++++++++++.++..++. ++ ++||+|+++.+.|..+.. .+...|
T Consensus 39 ~~Y~r~-~~p~-~~~le~~la~l~g----~~~~l~~~sG~~al~~~l~-ll-~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G 110 (378)
T TIGR01329 39 YDYTRS-GNPT-RTALESLLAKLDK----ADRAFAFSSGMAALDVITR-LL-NNGDEIIAGDDLYGGTDRLLTQVVPRSG 110 (378)
T ss_pred CccCCC-CChH-HHHHHHHHHHHhC----CCcEEEECCHHHHHHHHHH-Hh-CCCCEEEEcCCCchHHHHHHHHHHHHcC
Confidence 346554 2222 3444444444444 2566777777889998876 66 599999999999987654 345579
Q ss_pred CeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 018147 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (360)
Q Consensus 237 ~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~ 316 (360)
++++.+++. |++++++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|....
T Consensus 111 ~~v~~vd~~-------d~~~le~~i~~------~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~ 174 (378)
T TIGR01329 111 VVVVHVDTT-------DLDKVKAALGP------KTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPL 174 (378)
T ss_pred cEEEEeCCC-------CHHHHHHhcCc------CceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccc
Confidence 999988753 78999998875 7999999999999999998 9999999999999999999985422
Q ss_pred cCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc--cccccC
Q 018147 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF--HFFSKW 360 (360)
Q Consensus 317 ~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g--~~RvGw 360 (360)
. ..++ .++ .| ++++|++|.++| +.+.||
T Consensus 175 ~-----~~~l-----~~g---~D---i~v~S~tK~l~G~~~~~~G~ 204 (378)
T TIGR01329 175 L-----CNPL-----ELG---AD---IVYHSATKFLAGHSDVMAGV 204 (378)
T ss_pred c-----CChh-----hcC---Cc---EEEEecceeccCCccceeEE
Confidence 1 1111 111 23 889999998875 466664
No 194
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.69 E-value=9.9e-16 Score=148.41 Aligned_cols=160 Identities=16% Similarity=0.173 Sum_probs=125.5
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc---CCCC
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR---SEND 216 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~---~~gd 216 (360)
..+.+++++.+.+..... ....| .|..++.+.+++.+.+.+| ++++++++++|+++++..++..+.. .+||
T Consensus 32 ~~~~~~~a~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~la~~~g--~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~ 105 (371)
T PRK13520 32 PHPIARKAHEMFLETNLG-DPGLF---PGTAKLEEEAVEMLGELLH--LPDAYGYITSGGTEANIQAVRAARNLAKAEKP 105 (371)
T ss_pred chHHHHHHHHHHHhcCCC-CcccC---ccHHHHHHHHHHHHHHHhC--CCCCCeEEecCcHHHHHHHHHHHHhhccCCCc
Confidence 356677888777765322 12223 2345555566666666556 4456789999999999998877653 1579
Q ss_pred EEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHH
Q 018147 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (360)
Q Consensus 217 ~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~ 296 (360)
+|++.++.|..+...++..|.+++.++.+++ +.+|+++|++++++ ++++|++++++|+||.+.+ +++|.
T Consensus 106 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~------~~~~vi~~~~~~~tG~~~~---l~~I~ 174 (371)
T PRK13520 106 NIVVPESAHFSFDKAADMLGVELRRAPLDDD--YRVDVKAVEDLIDD------NTIGIVGIAGTTELGQVDP---IPELS 174 (371)
T ss_pred eEEecCcchHHHHHHHHHcCceEEEecCCCC--CcCCHHHHHHHHhh------CCEEEEEEcCCcCCcccCC---HHHHH
Confidence 9999999999999999999999999988643 47899999999987 6778888889999999998 88999
Q ss_pred HHHHHcCCEEEEccCCCCCc
Q 018147 297 DFCKKEGLVLLADEVYQENV 316 (360)
Q Consensus 297 ~la~~~~i~lI~DeaY~~~~ 316 (360)
++|+++|+++++|++|..+.
T Consensus 175 ~l~~~~g~~livD~a~~~~~ 194 (371)
T PRK13520 175 KIALENGIFLHVDAAFGGFV 194 (371)
T ss_pred HHHHHcCCCEEEEecchhHH
Confidence 99999999999999998754
No 195
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=6.3e-16 Score=150.47 Aligned_cols=152 Identities=19% Similarity=0.231 Sum_probs=112.1
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCch-HHHH---HHHHc
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP-LYSA---SIALH 235 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~-~~~~---~~~~~ 235 (360)
...|+.+. ...|++.+|++. | . +..+++.+| +.++..++. ++ .+||+|+++.|.|+ .|.. .+...
T Consensus 44 y~r~~~p~-~~~Le~~lA~l~----g--~-~~~~~~~sG-~aai~~~~~-~l-~~Gd~Viv~~~~y~~~~~~~~~~~~~~ 112 (377)
T PRK07671 44 YSRTGNPT-RAALEELIAVLE----G--G-HAGFAFGSG-MAAITAVMM-LF-SSGDHVILTDDVYGGTYRVMTKVLNRF 112 (377)
T ss_pred cCCCCChH-HHHHHHHHHHHh----C--C-CceEEeCCH-HHHHHHHHH-Hh-CCCCEEEECCCccchHHHHHHHHHhcC
Confidence 33444444 677888888876 3 2 234555555 678877664 56 49999999999998 4432 34557
Q ss_pred CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 018147 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (360)
Q Consensus 236 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~ 315 (360)
|++++.++. .|++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...
T Consensus 113 G~~v~~v~~-------~d~~~l~~ai~~------~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~ 176 (377)
T PRK07671 113 GIEHTFVDT-------SNLEEVEEAIRP------NTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTP 176 (377)
T ss_pred CeEEEEECC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCcc
Confidence 998888753 378999999876 7999999999999999977 888999999999999999999764
Q ss_pred ccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 316 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
.+.. + + .++ . -|+++|+||.++|
T Consensus 177 ~~~~---p--~-----~~g---~---Divv~S~sK~l~G 199 (377)
T PRK07671 177 YWQS---P--I-----SLG---A---DIVLHSATKYLGG 199 (377)
T ss_pred ccCC---h--h-----hhC---C---eEEEecCcccccC
Confidence 3321 1 1 111 1 3899999999874
No 196
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.69 E-value=6.3e-16 Score=150.32 Aligned_cols=152 Identities=17% Similarity=0.221 Sum_probs=117.1
Q ss_pred CCCCCCcCc---HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHH----HH
Q 018147 161 GAYSHSQGI---KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IA 233 (360)
Q Consensus 161 ~~Y~~~~G~---~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~----~~ 233 (360)
..|+. .|. ..|++.+|++. | .+++++++|+++|+..++.++++ +||+|++++|.|+..... ++
T Consensus 42 ~~Y~r-~gnPt~~~lE~~lA~l~----g----~~~~~~~~sG~~Ai~~al~all~-~GD~Vl~~~~~y~~t~~~~~~~~~ 111 (377)
T TIGR01324 42 LTYGR-RGTLTHFALQDAMCELE----G----GAGCYLYPSGLAAVTNSILAFVK-AGDHVLMVDSAYEPTRYFCDIVLK 111 (377)
T ss_pred CcccC-CCCccHHHHHHHHHHHh----C----CCcEEEECcHHHHHHHHHHHhcC-CCCEEEEcCCCcHHHHHHHHHHHH
Confidence 34553 344 58888888876 2 46899999999999999999984 999999999999876543 35
Q ss_pred HcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCC
Q 018147 234 LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ 313 (360)
Q Consensus 234 ~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~ 313 (360)
..|+++..++.. +.+.+++++++ ++|+|++++|+||+|.+.+ +++|+++|+++|+++|+|++|.
T Consensus 112 ~~gi~v~~~d~~-------~~e~l~~~i~~------~tklV~lesp~Np~g~~~d---l~~I~~la~~~g~~livD~t~a 175 (377)
T TIGR01324 112 RMGVDITYYDPL-------IGEDIATLIQP------NTKVLFLEAPSSITFEIQD---IPAIAKAARNPGIVIMIDNTWA 175 (377)
T ss_pred hcCcEEEEECCC-------CHHHHHHhcCC------CceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCc
Confidence 578887766422 23778888776 7999999999999987755 9999999999999999999998
Q ss_pred CCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 314 ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 314 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
.-.... ++ .++ .| |+++|++|.++|
T Consensus 176 ~g~~~~-----pl-----~~g---aD---ivv~S~tK~l~G 200 (377)
T TIGR01324 176 AGLLFK-----PL-----EHG---VD---ISIQAGTKYLVG 200 (377)
T ss_pred cccccC-----cc-----ccC---ce---EEEecCceeccC
Confidence 643321 11 111 23 889999999875
No 197
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.68 E-value=5.8e-16 Score=152.11 Aligned_cols=158 Identities=15% Similarity=0.204 Sum_probs=123.0
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCC--CC----CCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHc-
Q 018147 139 LFSADSIERAWQILDQIPGRATG--AY----SHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI- 211 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~--~Y----~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~- 211 (360)
..|+.+++++.+.+..... ... .+ .....+.++|+.+++++ ++++++|++|+|+++++..++..+.
T Consensus 14 ~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~t~a~~~~l~~l~~ 86 (402)
T TIGR02006 14 PVDPRVAEKMMPYLTEKFG-NPASRSHSFGWEAEEAVENARNQVAELI------GADSREIVFTSGATESNNLAIKGIAH 86 (402)
T ss_pred CCCHHHHHHHHHHHHhcCC-CCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHH
Confidence 4688899988777754321 111 11 11123556677777776 4578899999999999999887763
Q ss_pred --cCCCCEEEEcCCCchHHHHHH---HHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccC
Q 018147 212 --RSENDGILCPIPQYPLYSASI---ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (360)
Q Consensus 212 --~~~gd~Vlv~~P~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~ 286 (360)
..+||.|+++.+.|+.+...+ +..|.+++.++++++ +.+|++.+++++++ +++++++++++||||.+
T Consensus 87 ~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~------~~~lv~v~~~~n~tG~~ 158 (402)
T TIGR02006 87 FYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSN--GLIDLEELKAAIRD------DTILVSIMHVNNEIGVI 158 (402)
T ss_pred hhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCC--CcCCHHHHHHhcCC------CCEEEEEECCCcCceec
Confidence 148999999999999765543 456999999988754 47899999998875 68899999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 287 LAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 287 ~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
.+ +++|.++|+++|+++++|+++..
T Consensus 159 ~~---~~~I~~l~~~~g~~livD~a~a~ 183 (402)
T TIGR02006 159 QD---IAAIGEICRERKVFFHVDAAQSV 183 (402)
T ss_pred cc---HHHHHHHHHHcCCEEEEEcchhc
Confidence 98 88999999999999999999865
No 198
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.68 E-value=7.5e-16 Score=150.67 Aligned_cols=144 Identities=20% Similarity=0.256 Sum_probs=110.3
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchH----HHHHHHHcCCeEEEeec
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALHGGTLVPYYL 244 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~v~~ 244 (360)
...|++.+|++. | .+ +.+++++| +.++..++. ++ .+||+|+++.|.|+. +...++..|++++.+++
T Consensus 56 ~~~le~~lA~l~----g--~~-~~v~~~sG-~~ai~~~l~-~l-~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 125 (390)
T PRK08064 56 REALEDIIAELE----G--GT-KGFAFASG-MAAISTAFL-LL-SKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM 125 (390)
T ss_pred HHHHHHHHHHHh----C--CC-CeEEECCH-HHHHHHHHH-Hh-CCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC
Confidence 567888888876 3 23 45666555 678888886 55 499999999998873 23456678999999875
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~ 324 (360)
. |++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|.......
T Consensus 126 ~-------d~~~l~~~l~~------~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~----- 184 (390)
T PRK08064 126 T-------NLEEVAQNIKP------NTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQK----- 184 (390)
T ss_pred C-------CHHHHHHhcCC------CceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCcccccC-----
Confidence 3 68889888876 7999999999999999987 8889999999999999999998743221
Q ss_pred CHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 325 SFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 325 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
++ .++ ..++++|++|.++|
T Consensus 185 ~~-----~~g------~Divv~S~tK~~~G 203 (390)
T PRK08064 185 PL-----DLG------ADVVLHSATKFLAG 203 (390)
T ss_pred ch-----hhC------CcEEEeecceeccC
Confidence 11 111 13789999998863
No 199
>PLN02509 cystathionine beta-lyase
Probab=99.68 E-value=1.3e-15 Score=151.12 Aligned_cols=155 Identities=19% Similarity=0.247 Sum_probs=118.9
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHH----HHHHc
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALH 235 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~----~~~~~ 235 (360)
...|... |.+ .++++++++.+..| .+++++++|+++++..++. ++ ++||+|+++.|.|+.+.. .+...
T Consensus 124 ~~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~~~SG~aAi~~il~-ll-~~GD~VI~~~~~y~~t~~ll~~~l~~~ 195 (464)
T PLN02509 124 PYDYTRS-GNP-TRDALESLLAKLDK----ADRAFCFTSGMAALSAVTH-LI-KNGEEIVAGDDVYGGSDRLLSQVVPRS 195 (464)
T ss_pred CCccCCC-CCH-HHHHHHHHHHHHhC----CCEEEEeCcHHHHHHHHHH-Hh-CCCCEEEEcCCchhhHHHHHHHHHHHC
Confidence 3567765 665 67888888877654 4567777888899977664 56 599999999999998763 34567
Q ss_pred CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 018147 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (360)
Q Consensus 236 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~ 315 (360)
|++++.++. .|++++++++++ ++|+|++++|+||||.+. ++++|+++|+++|+++|+|++|...
T Consensus 196 G~~v~~vd~-------~d~e~l~~ai~~------~TklV~lesPsNPtG~i~---Dl~~I~~lAk~~g~~lIVD~A~a~~ 259 (464)
T PLN02509 196 GVVVKRVNT-------TNLDEVAAAIGP------QTKLVWLESPTNPRQQIS---DIRKIAEMAHAQGALVLVDNSIMSP 259 (464)
T ss_pred CeEEEEeCC-------CCHHHHHHhCCc------CCeEEEEECCCCCCCCHH---HHHHHHHHHHHcCCEEEEECCcccc
Confidence 998887753 368889988866 799999999999999874 5999999999999999999998764
Q ss_pred ccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 316 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
..... . ..+ .| ++++|++|.++|
T Consensus 260 ~~~~p--------l--~~g---aD---ivv~S~tK~l~G 282 (464)
T PLN02509 260 VLSRP--------L--ELG---AD---IVMHSATKFIAG 282 (464)
T ss_pred ccCCh--------h--hcC---Cc---EEEecCcccccC
Confidence 33211 1 111 23 889999998865
No 200
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.68 E-value=1.1e-15 Score=150.88 Aligned_cols=193 Identities=13% Similarity=0.025 Sum_probs=123.4
Q ss_pred CCCHHHHHHHHHHHHcCCC--CCCCCCC-CCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCC
Q 018147 139 LFSADSIERAWQILDQIPG--RATGAYS-HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN 215 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~--~~~~~Y~-~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~g 215 (360)
.+|+.+++++...+..... .....|. ...-...+.+...+.+++.+|. +..+|++++| ++++..++.+++ ++|
T Consensus 36 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~i~~~sg-t~al~~~l~~l~-~~g 111 (416)
T PRK00011 36 FVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGA--EYANVQPHSG-SQANAAVYFALL-KPG 111 (416)
T ss_pred cCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCC--CceeeecCCc-hHHHHHHHHHhc-CCC
Confidence 3588898887665432210 0011111 1111222322233345554553 4455766665 679999999998 499
Q ss_pred CEEEEcCCCchHHHH-----HHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHH
Q 018147 216 DGILCPIPQYPLYSA-----SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (360)
Q Consensus 216 d~Vlv~~P~y~~~~~-----~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~ 290 (360)
|+|+++.|+|..+.. .+...|++++.++++.+ ++.+|++++++++++. ++++|++++++|+ ...+
T Consensus 112 d~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~-----~~k~v~~~~~~~~--~~~~-- 181 (416)
T PRK00011 112 DTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEE-TGLIDYDEVEKLALEH-----KPKLIIAGASAYS--RPID-- 181 (416)
T ss_pred CEEEEeccccCCccccccccccccceeeEeecCcCcc-cCCcCHHHHHHHHHhc-----CCCEEEECCCcCC--CccC--
Confidence 999999999976432 12334678888887643 4689999999999753 6888888766654 4445
Q ss_pred HHHHHHHHHHHcCCEEEEccCCC-CCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 291 NQRAIVDFCKKEGLVLLADEVYQ-ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 291 ~l~~i~~la~~~~i~lI~DeaY~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
+++|+++|+++|+++|+|++|. ++.+.+. ....+. ..| +++.|+||++ +|.|.||
T Consensus 182 -~~~I~~la~~~~~~livD~a~~~g~~~~g~-~~~~~~---------~~d---i~~~S~~K~l-~g~~gg~ 237 (416)
T PRK00011 182 -FKRFREIADEVGAYLMVDMAHIAGLVAAGV-HPSPVP---------HAD---VVTTTTHKTL-RGPRGGL 237 (416)
T ss_pred -HHHHHHHHHHcCCEEEEECcchhcccccCc-cCCCCC---------CCc---EEEecCCcCC-CCCCceE
Confidence 8999999999999999999975 3333221 011110 022 7799999988 5677776
No 201
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.67 E-value=1.6e-15 Score=146.82 Aligned_cols=154 Identities=12% Similarity=0.155 Sum_probs=114.7
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeE
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTL 239 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~ 239 (360)
...|+.+. ..+|++++|++. ..+++++++|+++|+.+++. ++ ++||+|+++.+.|..-...+.......
T Consensus 48 Y~R~~~p~-~~~le~~lA~le--------g~~~~v~~~sG~aAi~~~l~-~l-~~GD~VI~~~~~yg~~~~~~~~~~~~~ 116 (364)
T PRK07269 48 YTRTKNPT-RAKLEETLAAIE--------SADYALATSSGMSAIVLAFS-VF-PVGSKVVAVRDLYGGSFRWFNQQEKEG 116 (364)
T ss_pred eeCCCCcc-HHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHH-Hh-CCCCEEEEecCCcCchHHHHHHHHhcC
Confidence 44555554 789999999987 36789999999999999985 55 599999999999875444333221000
Q ss_pred EEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCC
Q 018147 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (360)
Q Consensus 240 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~ 319 (360)
.+.. .|..|++++++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+..
T Consensus 117 -~~~~----~~~~d~~~l~~~i~~------~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~~~ 182 (364)
T PRK07269 117 -RFHF----TYANTEEELIAAIEE------DTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIYQR 182 (364)
T ss_pred -cEEE----EecCCHHHHHHhcCc------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 0111 245689999999976 7999999999999999886 9999999999999999999976533221
Q ss_pred CCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 320 EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 320 ~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
++ ..+ .| |+++|++|.++|
T Consensus 183 -----pl-----~~g---aD---ivv~S~tK~l~g 201 (364)
T PRK07269 183 -----PI-----ELG---AD---IVLHSATKYLSG 201 (364)
T ss_pred -----ch-----hhC---Cc---EEEecCceeccC
Confidence 11 111 23 899999998874
No 202
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.66 E-value=1.8e-15 Score=149.67 Aligned_cols=206 Identities=14% Similarity=0.051 Sum_probs=139.4
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
...+||+..+ -.--++.+++++.+.+.+.. ..+.+..+..+|++++++++.. .++|++++|+++
T Consensus 47 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~----~~~~~~~~~~~lae~l~~~~~~-------~~~v~~~~sGse 115 (423)
T TIGR00713 47 GNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGT----SYGAPTEAEILLAKEIISRVPS-------VEMVRFVNSGTE 115 (423)
T ss_pred CCEEEEccccccccccCCCCHHHHHHHHHHHHhCC----cCCCCCHHHHHHHHHHHHhCCc-------ccEEEEeCCHHH
Confidence 4456666554 22457899999999887632 2223455788999999887621 368999999999
Q ss_pred HHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHc---CCeEEEeecCCC-------CCc---CCCHHHHHHHHHHHHhc
Q 018147 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIALH---GGTLVPYYLDEA-------TGW---GLETSEVKKQLEAAKAK 267 (360)
Q Consensus 202 al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~-------~~~---~~d~~~L~~~i~~~~~~ 267 (360)
|+..+++.... ...++|+...+.|..+...+... +......+..+. ..+ ..|+++|++.++..
T Consensus 116 A~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~--- 192 (423)
T TIGR00713 116 ATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEY--- 192 (423)
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHc---
Confidence 99998886431 24689999999999876543321 111111111100 000 02789999988632
Q ss_pred CCCccEEEEe-cCCCCcccCCC-HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEE
Q 018147 268 GITVRALVVI-NPGNPTGQVLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSF 345 (360)
Q Consensus 268 g~~~k~iil~-~P~NPTG~~~~-~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~ 345 (360)
+.++++|++. .|+| +|.+.+ ++.+++|.++|++||+++|+||+|.++.++.. +. . .. .+ ..|| +
T Consensus 193 ~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~--~~-~-~~-~~---~~pD-----i 258 (423)
T TIGR00713 193 GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALG--GA-Q-EY-FG---VEPD-----L 258 (423)
T ss_pred CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcc--hh-H-HH-hC---CCcc-----h
Confidence 1267888886 8888 798888 58899999999999999999999999855321 11 1 11 11 1255 2
Q ss_pred eccCcCccccccccC
Q 018147 346 QSVSKGRYFHFFSKW 360 (360)
Q Consensus 346 ~S~SK~~~g~~RvGw 360 (360)
-+|||++++|+|+||
T Consensus 259 ~t~sK~l~~G~pig~ 273 (423)
T TIGR00713 259 TTLGKIIGGGLPVGA 273 (423)
T ss_pred hhhhhhhcCCCceee
Confidence 379999999999998
No 203
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.66 E-value=5.8e-15 Score=145.00 Aligned_cols=198 Identities=12% Similarity=0.068 Sum_probs=133.3
Q ss_pred CCccccCcc---CCCCCHHHHHHHHHHHHcCCCCCCC----CCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 018147 128 PSILDRSET---QGLFSADSIERAWQILDQIPGRATG----AYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (360)
Q Consensus 128 p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~----~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~ 200 (360)
.++++++++ +...+|++++++.+.++..+. +.. .|....-..+|++.+|+++ | .++ .+++++++
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~-~~~~s~~~~g~~~~~~~Le~~la~~~----g---~~~-~l~~~sG~ 115 (402)
T TIGR01821 45 KDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGA-GAGGTRNISGTNIPHVELEAELADLH----G---KES-ALVFTSGY 115 (402)
T ss_pred eeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCC-CCcchhhhhCCcHHHHHHHHHHHHHh----C---CCe-EEEECchH
Confidence 457788777 667789999999998887532 111 1222223456677776665 3 133 44445457
Q ss_pred HHHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecC
Q 018147 201 PAVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (360)
Q Consensus 201 ~al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P 279 (360)
+++..++..+.. .+++.|+.....|......+...|+++..++. .|++++++.++.. ...++++|++++|
T Consensus 116 ~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~--~~~~~~~v~~e~~ 186 (402)
T TIGR01821 116 VANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSV--DPNRPKIIAFESV 186 (402)
T ss_pred HHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhc--cCCCCeEEEEcCC
Confidence 888888887752 26777777666777777777888887765532 2678888877632 1125789999999
Q ss_pred CCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc
Q 018147 280 GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY 353 (360)
Q Consensus 280 ~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 353 (360)
+||||.+.+ +++|.++|+++|+++|+||+|...+++.. ...+... .++. ++ ..|+++||||+|+
T Consensus 187 ~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~--g~g~~~~-~~~~---~~-~div~~t~sKa~g 250 (402)
T TIGR01821 187 YSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPR--GGGIAER-DGLM---HR-IDIIEGTLAKAFG 250 (402)
T ss_pred CCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCC--CCccchh-ccCC---CC-CeEEEEechhhhc
Confidence 999999998 89999999999999999999985545432 1111111 1111 12 2478899999987
No 204
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.66 E-value=2.8e-15 Score=145.17 Aligned_cols=161 Identities=14% Similarity=0.082 Sum_probs=120.2
Q ss_pred cHHHHHHHHHHHHhhcCCCCCC--CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHH--HHHHHHcCCeEEEeec
Q 018147 169 IKGLRDTIAAGIEARDGFPADP--NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY--SASIALHGGTLVPYYL 244 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~--~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~--~~~~~~~g~~~~~v~~ 244 (360)
..++|+.+++++ | +++ ++|++|+|+++++..++.++.. +||.|++..+.+.+. ...++..|.+++.+++
T Consensus 37 ~~~~r~~la~l~----~--~~~~~~~i~~t~~~t~al~~~~~~l~~-~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~ 109 (363)
T TIGR02326 37 VEQIRQQLLALA----T--AEEGYTSVLLQGSGTFAVEAVIGSAVP-KDGKLLVVINGAYGARIVQIAEYLGIPHHVVDT 109 (363)
T ss_pred HHHHHHHHHHHh----C--CCCCceEEEEcCCCHHHHHHHHHhcCC-CCCeEEEEeCChhhHHHHHHHHHcCCceEEEeC
Confidence 344556666655 4 344 4799999999999999999985 888877766655443 4667889999999998
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~ 324 (360)
+++ +.+|++++++++++. ++++++.+++++||||..++ +++|+++|+++|+++|+|+++. ++.. ..
T Consensus 110 ~~~--~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~---~g~~--~~ 175 (363)
T TIGR02326 110 GEV--EPPDVVEVEAILAAD----PAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSS---FGGI--PI 175 (363)
T ss_pred CCC--CCCCHHHHHHHHhhC----CCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEcccc---ccCc--cc
Confidence 754 478999999998752 24677888999999999998 8899999999999999998764 3322 22
Q ss_pred CHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 325 SFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 325 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
++.+. + .| +++.|++|.++|...+||
T Consensus 176 ~~~~~----~---~D---~~~~s~~K~l~~p~G~G~ 201 (363)
T TIGR02326 176 DIAEL----H---ID---YLISSANKCIQGVPGFGF 201 (363)
T ss_pred chhhc----C---cc---EEEecCccccccCCcceE
Confidence 22211 1 23 778999999876655675
No 205
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.66 E-value=8.8e-15 Score=143.27 Aligned_cols=191 Identities=15% Similarity=0.101 Sum_probs=131.8
Q ss_pred CCCHHHHHHHHHHHHcCCC---CCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCC
Q 018147 139 LFSADSIERAWQILDQIPG---RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN 215 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~---~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~g 215 (360)
...+++++++.+.+++.+. .....|+...+..+|++++|+++. . ++.+++++|.++.+ .++..++ ++|
T Consensus 12 ~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g------~-e~al~~~sG~~a~~-~~i~~l~-~~G 82 (392)
T PLN03227 12 SSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLG------T-ESAILYSDGASTTS-STVAAFA-KRG 82 (392)
T ss_pred CCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhC------C-CcEEEecCcHHHHH-HHHHHhC-CCC
Confidence 3467889998888876321 112347777788999999999982 1 36788888877777 5566677 499
Q ss_pred CEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHh--------cCCCccEEEEecCCCCcccCC
Q 018147 216 DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA--------KGITVRALVVINPGNPTGQVL 287 (360)
Q Consensus 216 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~--------~g~~~k~iil~~P~NPTG~~~ 287 (360)
|.|+++.+.|..+...+...+++++.++.. |++.+++.++.... ..+++++|++..+.||+|.+.
T Consensus 83 D~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~-------d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~ 155 (392)
T PLN03227 83 DLLVVDRGVNEALLVGVSLSRANVRWFRHN-------DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLA 155 (392)
T ss_pred CEEEEeccccHHHHHHHHHcCCeEEEeCCC-------CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCccc
Confidence 999999999999988888888887776543 34444443332211 123577888889999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc
Q 018147 288 AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY 353 (360)
Q Consensus 288 ~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 353 (360)
+ +++|.++|+++|+++|+||+|. +...+.. -....... ++... .+ .-|++.|+||+++
T Consensus 156 ~---l~~i~~l~~~~g~~livDe~~~-~g~~g~~-G~g~~~~~-g~~p~-~~-~Div~~slsk~~g 213 (392)
T PLN03227 156 P---LKELVALKEEFHYRLILDESFS-FGTLGKS-GRGSLEHA-GLKPM-VH-AEIVTFSLENAFG 213 (392)
T ss_pred C---HHHHHHHHHHcCCEEEEECccc-ccccCCC-CCcHHHHc-CCCCC-CC-ceEEEeechhhhh
Confidence 9 8899999999999999999997 3332221 11222211 11100 11 2488889999865
No 206
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.66 E-value=1.5e-14 Score=142.27 Aligned_cols=199 Identities=13% Similarity=0.041 Sum_probs=133.4
Q ss_pred CCccccCcc---CCCCCHHHHHHHHHHHHcCCCCC---CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 128 PSILDRSET---QGLFSADSIERAWQILDQIPGRA---TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 128 p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
.++++++++ ....+|++++++.+.+....... ...|.+..-..+|++.+|+++ | .++.+++++|. +
T Consensus 46 ~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~----g---~~~~~~~~sG~-~ 117 (407)
T PRK09064 46 REVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLH----G---KEAALVFTSGY-V 117 (407)
T ss_pred ceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHh----C---CCcEEEECcHH-H
Confidence 567888777 66778999999988887643200 112333334566777777765 4 24556666664 5
Q ss_pred HHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCC
Q 018147 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (360)
Q Consensus 202 al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~ 280 (360)
+...++..+.. .+++.|+.....|......++..|.++..++. .|++++++.++.. ...++++|++++|+
T Consensus 118 an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~--~~~~~~~v~~~~v~ 188 (407)
T PRK09064 118 SNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAA--DPDRPKLIAFESVY 188 (407)
T ss_pred HHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhc--cCCCCeEEEEeCCC
Confidence 65566666542 26776666666777777777778887765543 3678888877631 11267899999999
Q ss_pred CCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc
Q 018147 281 NPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY 353 (360)
Q Consensus 281 NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 353 (360)
||+|.+.+ +++|.++|+++|+++|+||+|....|+.. ...+... .++. ++ ..|+++||||+|+
T Consensus 189 s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~--g~g~~~~-~~~~---~~-~div~~t~sKa~g 251 (407)
T PRK09064 189 SMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPR--GGGIAER-DGLM---DR-IDIIEGTLAKAFG 251 (407)
T ss_pred CCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCC--CCChHHh-cCCC---CC-CeEEEEecchhhh
Confidence 99999998 89999999999999999999985445432 1122221 1111 12 2588999999987
No 207
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.66 E-value=2.8e-15 Score=146.10 Aligned_cols=152 Identities=18% Similarity=0.201 Sum_probs=112.5
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHH----HHHHHc
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS----ASIALH 235 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~----~~~~~~ 235 (360)
+..|+.+. ...|++.+|++. | .+..+++ ++++.|+..++. ++ .+||+|+++.|.|+... ..+...
T Consensus 44 y~r~~~p~-~~~Le~~la~l~----g---~~~al~~-~SG~~Al~~~l~-~l-~pGd~Vi~~~~~y~~t~~~~~~~~~~~ 112 (380)
T PRK06176 44 YSRSGNPT-RFALEELIADLE----G---GVKGFAF-ASGLAGIHAVFS-LF-QSGDHVLLGDDVYGGTFRLFDKVLVKN 112 (380)
T ss_pred ccCCCChh-HHHHHHHHHHHh----C---CCCEEEE-CCHHHHHHHHHH-Hc-CCCCEEEEcCCChhHHHHHHHHHHHhc
Confidence 34444444 677788887775 3 1234555 445678887775 55 59999999999997543 345667
Q ss_pred CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 018147 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (360)
Q Consensus 236 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~ 315 (360)
|++++.++. .|++++++++++ ++++|++.+|+||||.+.+ +++|+++|+++|+++|+|++|...
T Consensus 113 gi~v~~vd~-------~d~e~l~~ai~~------~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~ 176 (380)
T PRK06176 113 GLSCTIIDT-------SDLSQIKKAIKP------NTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATP 176 (380)
T ss_pred CeEEEEcCC-------CCHHHHHHhcCc------CceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCcccc
Confidence 888887753 378999998876 7999999999999999998 889999999999999999999875
Q ss_pred ccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 316 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
.+... + ..+ .| +++.|++|.++|
T Consensus 177 ~~~~p-----~-----~~g---aD---ivv~S~tK~l~g 199 (380)
T PRK06176 177 YYQNP-----L-----LLG---AD---IVVHSGTKYLGG 199 (380)
T ss_pred ccCCc-----c-----ccC---CC---EEEecCceeccC
Confidence 43321 1 111 23 889999998864
No 208
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.66 E-value=8e-15 Score=142.99 Aligned_cols=152 Identities=18% Similarity=0.264 Sum_probs=120.9
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH-ccCCCCEE
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGI 218 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l-~~~~gd~V 218 (360)
+..+.++++.+.+... . |....+..+|++++++++. .++.++++|+++|+..++.++ + .+||+|
T Consensus 8 ~~~~~~~~v~~~~~~~----~--~~~g~~~~~le~~la~~~g--------~~~~v~~~sgt~al~~~l~al~~-~~Gd~V 72 (380)
T TIGR03588 8 IDQDDIDAVVEVLKSD----F--LTQGPTVPAFEEALAEYVG--------AKYAVAFNSATSALHIACLALGV-GPGDRV 72 (380)
T ss_pred CCHHHHHHHHHHHhcC----C--ccCChhHHHHHHHHHHHHC--------CCeEEEEcCHHHHHHHHHHHcCC-CCCCEE
Confidence 3556677777777652 2 3334457899999999982 234566778899999999998 5 499999
Q ss_pred EEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHH
Q 018147 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (360)
Q Consensus 219 lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~l 298 (360)
+++.++|..+...+...|++++.++++++ ++.+|++++++++++. +.+++++|+++| ++|...+ +++|.++
T Consensus 73 iv~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~--~~~~t~~v~~~~---~~G~~~~---~~~i~~l 143 (380)
T TIGR03588 73 WTTPITFVATANCALYCGAKVDFVDIDPD-TGNIDEDALEKKLAAA--KGKLPKAIVPVD---FAGKSVD---MQAIAAL 143 (380)
T ss_pred EeCCcchHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHhhcc--cCCCceEEEEeC---CCCccCC---HHHHHHH
Confidence 99999999999999999999999999764 4789999999999731 001688888654 6888776 8999999
Q ss_pred HHHcCCEEEEccCCCCC
Q 018147 299 CKKEGLVLLADEVYQEN 315 (360)
Q Consensus 299 a~~~~i~lI~DeaY~~~ 315 (360)
|+++|++||+|+++...
T Consensus 144 ~~~~~~~lI~D~a~a~g 160 (380)
T TIGR03588 144 AKKHGLKIIEDASHALG 160 (380)
T ss_pred HHHcCCEEEEECCCccc
Confidence 99999999999999864
No 209
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.65 E-value=4.5e-15 Score=146.71 Aligned_cols=145 Identities=17% Similarity=0.223 Sum_probs=114.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHH----HHHHHHcCCeEEEeec
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY----SASIALHGGTLVPYYL 244 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~----~~~~~~~g~~~~~v~~ 244 (360)
...|.+.+|++. | .+..++++++++|+..++.+++. +||+|+++.+.|... ...+...|++++.++.
T Consensus 65 ~~~le~~lA~l~----g----~~~al~~~SG~~Ai~~al~all~-pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (427)
T PRK05994 65 NAVLEERVAALE----G----GTAALAVASGHAAQFLVFHTLLQ-PGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA 135 (427)
T ss_pred HHHHHHHHHHHh----C----CCcEEEEcCHHHHHHHHHHHHhC-CCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence 466777777775 3 24578888899999999999884 999999999999853 3446778999888764
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~ 324 (360)
. |++.+++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 136 ~-------d~~~l~~ai~~------~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~----- 194 (427)
T PRK05994 136 D-------DPASFERAITP------RTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYLIR----- 194 (427)
T ss_pred C-------CHHHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccccCC-----
Confidence 2 78899998876 7999999999999999998 8899999999999999999997532211
Q ss_pred CHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 325 SFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 325 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
++ .++ .| +++.|++|.++|
T Consensus 195 pl-----~~g---aD---ivv~S~tK~lgg 213 (427)
T PRK05994 195 PI-----EHG---AD---IVVHSLTKFLGG 213 (427)
T ss_pred cc-----ccC---Cc---EEEEcCccccCC
Confidence 11 111 24 888999998875
No 210
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.65 E-value=5e-15 Score=139.07 Aligned_cols=185 Identities=19% Similarity=0.289 Sum_probs=121.7
Q ss_pred CCCCC-CCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH-HHH-HHHHcc-----------CCCCEEEEcCCC
Q 018147 159 ATGAY-SHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV-HMM-MQLLIR-----------SENDGILCPIPQ 224 (360)
Q Consensus 159 ~~~~Y-~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al-~~~-~~~l~~-----------~~gd~Vlv~~P~ 224 (360)
....| +...|++++|+-.|+.+ ++++++|++..+++-.| +.+ ..+++. .+.-+.++|.|+
T Consensus 60 D~RNY~G~l~Gipe~r~l~a~ll------gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPG 133 (425)
T PF12897_consen 60 DCRNYPGGLDGIPEARELFAELL------GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPG 133 (425)
T ss_dssp BTTSS-S-SS--HHHHHHHHHHH------TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES-
T ss_pred cccCCCCccCChHHHHHHHHHHh------CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCC
Confidence 46789 99999999999999999 68899999987765544 222 222221 123468999999
Q ss_pred chHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEe-cCCCCcccCCCHHHHHHHHHH-HHHc
Q 018147 225 YPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDF-CKKE 302 (360)
Q Consensus 225 y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~-~P~NPTG~~~~~~~l~~i~~l-a~~~ 302 (360)
|..+..+.+.+|.+.++||+.++ ++|+|.+++.+.+ .+.+|.|++. ..+||||.++|.+..++++.+ ....
T Consensus 134 YDRHFai~E~~Giemi~VpM~~d---GPDmD~Ve~LV~~----D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~ 206 (425)
T PF12897_consen 134 YDRHFAITEHFGIEMIPVPMTED---GPDMDMVEELVAE----DPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAP 206 (425)
T ss_dssp -HHHHHHHHHCT-EEEEEEEETT---EE-HHHHHHHTHT----STTEEEEEE-SSS-TTT-----HHHHHHHHHS--SST
T ss_pred chHHHHHHHhhCcEEEecCCCCC---CCCHHHHHHHHhc----CCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCc
Confidence 99999999999999999999988 9999999998854 2378888866 559999999999999999998 4457
Q ss_pred CCEEEEccCCCCCcc-CCCC--CCCCHHHHHHhhCCCCCCceEEEEeccCcCcccccccc
Q 018147 303 GLVLLADEVYQENVY-VPEK--KFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSK 359 (360)
Q Consensus 303 ~i~lI~DeaY~~~~~-~~~~--~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvG 359 (360)
+..|+-|++|.--.+ ++.. ....+...+...+. || +++.+.|.||.-.+|-.|+
T Consensus 207 DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGn--pd-rv~~F~STSKITf~GaGva 263 (425)
T PF12897_consen 207 DFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGN--PD-RVYVFASTSKITFPGAGVA 263 (425)
T ss_dssp T-EEEEE-TTTT-BSSSSSS------HHHHHHHTT---TT-SEEEEEESTTTS-TTSS-E
T ss_pred CeEEEeecCceEeeccccccchhhhHHHHHHHHcCC--CC-eEEEEecccccccCCccee
Confidence 999999999976555 2221 12367777666654 88 8999999999655554444
No 211
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.64 E-value=6e-15 Score=143.08 Aligned_cols=157 Identities=14% Similarity=0.200 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-----CCCCE
Q 018147 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-----SENDG 217 (360)
Q Consensus 143 ~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-----~~gd~ 217 (360)
.+.+++.+.+..... ....|+ |...+.+.+.+.+.+..| ++++++++++|+++++..++.++.. .+||+
T Consensus 35 ~~~~a~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~la~~~g--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 108 (373)
T TIGR03812 35 IAVKAYDMFIETNLG-DPGLFP---GTKKIEEEVVGSLGNLLH--LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPN 108 (373)
T ss_pred HHHHHHHHHhhcCCC-CcccCc---cHHHHHHHHHHHHHHHhC--CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcE
Confidence 345555555444321 122232 334444555555555445 4567889999999999888766541 36799
Q ss_pred EEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHH
Q 018147 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (360)
Q Consensus 218 Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~ 297 (360)
|+++.++|..|...++..|++++.+++++ ++.+|++++++++++ ++..+++++|+||||.+.+ +++|.+
T Consensus 109 vl~~~~~h~~~~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~l~~------~~~~vv~~~~~~~tG~~~~---~~~i~~ 177 (373)
T TIGR03812 109 IIVPESAHFSFEKAAEMLGLELRYAPLDE--DYTVDVKDVEDLIDD------NTIGIVGIAGTTELGQIDD---IEELSK 177 (373)
T ss_pred EEECCcchHHHHHHHHHcCCeEEEEeeCC--CCCcCHHHHHHHHhh------CcEEEEEECCCCCCCccCC---HHHHHH
Confidence 99999999999999999999999999864 368999999999976 5655666678999999987 888999
Q ss_pred HHHHcCCEEEEccCCCCCc
Q 018147 298 FCKKEGLVLLADEVYQENV 316 (360)
Q Consensus 298 la~~~~i~lI~DeaY~~~~ 316 (360)
+|+++|+++|+|++|..+.
T Consensus 178 l~~~~~~~livD~a~~~~~ 196 (373)
T TIGR03812 178 IALENGIYLHVDAAFGGFV 196 (373)
T ss_pred HHHHcCCeEEEEcCchhHH
Confidence 9999999999999998653
No 212
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.64 E-value=2.1e-14 Score=144.07 Aligned_cols=159 Identities=17% Similarity=0.182 Sum_probs=125.0
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCC---CCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHH--HHHHccC
Q 018147 139 LFSADSIERAWQILDQIPGRATGAY---SHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMM--MQLLIRS 213 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y---~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~--~~~l~~~ 213 (360)
.+|+.+.+.+.+.... . ..+.| ...+|..++++++++++.+.+|.+ ...+..++|+.+.+..+ ++.+..+
T Consensus 81 ~~~p~i~~~~~~~~~~-~--~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~~~GA~a~~~~l~~~r~~~~~ 155 (481)
T PRK04366 81 KYNPKINEKVARLPGF-A--ELHPLQPEETVQGALELMYELQEWLKEITGMD--AVTLQPAAGAHGELTGLLMIRAYHEA 155 (481)
T ss_pred CCCHHHHHHHHhCcch-h--cCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEeCcHHHHHHHHHHHHHHHhhc
Confidence 5688788777653111 1 36678 457899999999999999998853 34555566766665533 3322224
Q ss_pred CCC----EEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCH
Q 018147 214 END----GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (360)
Q Consensus 214 ~gd----~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~ 289 (360)
+|| +|+++.|.|+.|...++..|++++.++++. +|.+|+++|++++++ ++++|++++|+ |||.+ .
T Consensus 156 ~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~--~~~~D~e~L~~~i~~------~t~~V~v~~Pn-~tG~~--~ 224 (481)
T PRK04366 156 RGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNE--DGLVDLEALKAAVGE------DTAALMLTNPN-TLGLF--E 224 (481)
T ss_pred cCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCC--CCCcCHHHHHhhccc------CCeEEEEeCCC-Ccccc--c
Confidence 776 999999999999999999999999999864 368999999999876 79999999998 99954 4
Q ss_pred HHHHHHHHHHHHcCCEEEEccCCC
Q 018147 290 ENQRAIVDFCKKEGLVLLADEVYQ 313 (360)
Q Consensus 290 ~~l~~i~~la~~~~i~lI~DeaY~ 313 (360)
+++++|+++|+++|+++++|.++.
T Consensus 225 ~dl~eI~~~a~~~gal~iVD~a~~ 248 (481)
T PRK04366 225 RNILEIAEIVHEAGGLLYYDGANL 248 (481)
T ss_pred hHHHHHHHHHHHcCCEEEEEecCh
Confidence 579999999999999999999974
No 213
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.64 E-value=7.2e-15 Score=145.26 Aligned_cols=145 Identities=19% Similarity=0.213 Sum_probs=116.2
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHH----HHcCCeEEEeec
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLVPYYL 244 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~v~~ 244 (360)
..+|++.+|+++ | .+..++|+++++|+.+++..++. +||+|+++...|......+ ...|++++.++.
T Consensus 66 ~~~le~~lA~l~----g----~~~av~~sSGt~Al~~al~~ll~-~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 136 (433)
T PRK08134 66 VAVLEERVAALE----G----GVGAIATASGQAALHLAIATLMG-AGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP 136 (433)
T ss_pred HHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHHhC-CCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence 677888888776 2 23478899999999999998874 9999999999998654443 457999988875
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~ 324 (360)
+ |++++++++++ ++|+|++.+|+||+|.+.+ +++|+++|+++|+++|+|.++..-....
T Consensus 137 ~-------d~~~l~~~i~~------~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~~~----- 195 (433)
T PRK08134 137 G-------DIDGWRAAIRP------NTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYLLR----- 195 (433)
T ss_pred C-------CHHHHHHhcCC------CCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC-----
Confidence 3 68999999987 8999999999999999999 9999999999999999999986532211
Q ss_pred CHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 325 SFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 325 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
++ .++ -| +++.|.+|.++|
T Consensus 196 pl-----~~G---aD---~vv~S~tK~l~g 214 (433)
T PRK08134 196 PF-----EHG---AD---LVYHSATKFLGG 214 (433)
T ss_pred ch-----hcC---CC---EEEeccccccCC
Confidence 11 111 23 888999998875
No 214
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.63 E-value=8.7e-15 Score=143.13 Aligned_cols=158 Identities=16% Similarity=0.216 Sum_probs=129.0
Q ss_pred CCHHHHHHHHHHHHcCCC-CCCCCCCCCc----CcHHHHHHHHHHHHhhcCCCCC-CCCEEEcCChHHHHHHHHHHHc--
Q 018147 140 FSADSIERAWQILDQIPG-RATGAYSHSQ----GIKGLRDTIAAGIEARDGFPAD-PNDIFLTDGASPAVHMMMQLLI-- 211 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~-~~~~~Y~~~~----G~~~lr~~ia~~l~~~~g~~~~-~~~I~~t~Ga~~al~~~~~~l~-- 211 (360)
.|..+++++.+.+..... .+...|.... -+++.|+.+|+|+ +.+ .++|++|.|+|++|+.+..++.
T Consensus 34 ~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~------~a~~~~eIvft~~tT~aln~va~~l~~~ 107 (405)
T COG0520 34 KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFL------NADSSDEIVFTRGTTEALNLVARGLGRS 107 (405)
T ss_pred CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHh------CCCCCCeEEEeCChhHHHHHHHHHhhhh
Confidence 688999998887754322 1223333332 3567788888887 456 4899999999999999999983
Q ss_pred cCCCCEEEEcCCCch----HHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCC
Q 018147 212 RSENDGILCPIPQYP----LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (360)
Q Consensus 212 ~~~gd~Vlv~~P~y~----~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~ 287 (360)
..+||+|++..-.|+ ++....+..|++++.+|++++ ..++.+.++..+++ ++|+|.+++-+|.||.+.
T Consensus 108 ~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~--g~~~~~~~~~~i~~------~Tklvais~vSn~tG~~~ 179 (405)
T COG0520 108 LKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDD--GLLDLDALEKLITP------KTKLVALSHVSNVTGTVN 179 (405)
T ss_pred hcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCC--CCcCHHHHHHhcCC------CceEEEEECccccccccc
Confidence 248999999998887 456666777999999999844 48899999998887 899999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 288 AEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 288 ~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
+ +++|+++|+++|+++++|.+.+-
T Consensus 180 p---v~~I~~la~~~ga~v~VDaaq~~ 203 (405)
T COG0520 180 P---VKEIAELAHEHGALVLVDAAQAA 203 (405)
T ss_pred h---HHHHHHHHHHcCCEEEEECcccc
Confidence 9 99999999999999999999765
No 215
>PLN02651 cysteine desulfurase
Probab=99.63 E-value=1.4e-14 Score=140.39 Aligned_cols=161 Identities=14% Similarity=0.238 Sum_probs=119.9
Q ss_pred CCCCCHHHHHHHHHHHHcCCCC-CCCCC--CC--CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHc
Q 018147 137 QGLFSADSIERAWQILDQIPGR-ATGAY--SH--SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI 211 (360)
Q Consensus 137 ~~~~p~~v~~~~~~~l~~~~~~-~~~~Y--~~--~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~ 211 (360)
+..+|+.+++++.+.+...... ....+ .. ..-..++|+.+++++ | .++++|++|+|++++++.++..+.
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~v~~t~~~t~a~~~~l~~~~ 81 (364)
T PLN02651 8 TTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI----G--ADPKEIIFTSGATESNNLAIKGVM 81 (364)
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEeCCHHHHHHHHHHHHH
Confidence 3357888999988777542110 00011 11 111345556666655 4 567899999999999888776652
Q ss_pred ---cCCCCEEEEcCCCchHHHHH---HHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCccc
Q 018147 212 ---RSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (360)
Q Consensus 212 ---~~~gd~Vlv~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~ 285 (360)
..+||+|++....|+.+... ++..|.+++.++++++ +.+|++++++++++ +++++++++++||||.
T Consensus 82 ~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~i~~------~t~lv~v~~~~n~tG~ 153 (364)
T PLN02651 82 HFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSD--GLVDLDELAAAIRP------DTALVSVMAVNNEIGV 153 (364)
T ss_pred HhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCC--CcCCHHHHHHhcCC------CcEEEEEECCCCCcee
Confidence 14899999999888765433 3456899999988643 47899999999976 7899999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 286 VLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 286 ~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
+.+ +++|.++|+++|+++++|.++..
T Consensus 154 ~~~---l~~I~~~~~~~g~~~~vD~a~~~ 179 (364)
T PLN02651 154 IQP---VEEIGELCREKKVLFHTDAAQAV 179 (364)
T ss_pred ccc---HHHHHHHHHHcCCEEEEEcchhh
Confidence 998 88999999999999999999875
No 216
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.62 E-value=5.4e-14 Score=138.35 Aligned_cols=198 Identities=13% Similarity=0.067 Sum_probs=132.8
Q ss_pred CCccccCcc---CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcC----cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 018147 128 PSILDRSET---QGLFSADSIERAWQILDQIPGRATGAYSHSQG----IKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (360)
Q Consensus 128 p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G----~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~ 200 (360)
.++++++++ ...-+|++++++.+.++.... +...+....| ..+|.+.+|+++ |. +..+++++| +
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~-~~~~s~~~~~~~~~~~~le~~la~~~----g~---~~~~~~~SG-~ 115 (406)
T PRK13393 45 REVTVWCSNDYLGMGQHPAVLAAMHEALDTCGA-GAGGTRNISGTNHYHVLLEAELADLH----GK---EAALLFTSG-Y 115 (406)
T ss_pred ccEEEeecccccCCCCCHHHHHHHHHHHHHcCC-CCcccccccCChHHHHHHHHHHHHHh----CC---CcEEEeCCc-H
Confidence 457888888 334589999999998887542 1112222223 345555555554 41 344555555 5
Q ss_pred HHHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecC
Q 018147 201 PAVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (360)
Q Consensus 201 ~al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P 279 (360)
++...++..+.. .+||.|++....|......+...|.+++.++. .|++.+++.++.. +..++++|+++++
T Consensus 116 ~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~--~~~~~~~v~~~~v 186 (406)
T PRK13393 116 VSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDL--DPHRPKLVAFESV 186 (406)
T ss_pred HHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhc--cCCCCEEEEEcCC
Confidence 688888886653 26787777778888888888888888776653 3677787777532 1125778889999
Q ss_pred CCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc
Q 018147 280 GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY 353 (360)
Q Consensus 280 ~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 353 (360)
+|++|.+.+ +++|.++|+++|+++|+||+|....++.. ...+... .++. ++ ..|+++||||+|+
T Consensus 187 ~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~--G~g~~~~-~~~~---~~-~~i~~~tlsKa~g 250 (406)
T PRK13393 187 YSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPR--GGGIAER-EGLA---DR-LTIIEGTLAKAFG 250 (406)
T ss_pred CCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCC--CCchhhh-cCCC---CC-CeEEEEeCchhhc
Confidence 999999999 89999999999999999999985555432 1122111 1111 22 2577899999987
No 217
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.62 E-value=1.3e-14 Score=142.27 Aligned_cols=206 Identities=15% Similarity=0.113 Sum_probs=129.7
Q ss_pred CCCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 018147 126 DHPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (360)
Q Consensus 126 ~~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~ 200 (360)
+..+++|+..+ -.--+|.+++++.+.++.... ...+.. ......+++.+.+..+ .+.++++++++
T Consensus 38 ~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~--~~~~~~----~~~~~~l~~~l~~~~~----~~~~~~~~SGs 107 (396)
T PRK04073 38 EGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTL--TSRAFH----SDQLGPWYEKVAKLTG----KDMVLPMNTGA 107 (396)
T ss_pred CCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccc--cccccC----CHHHHHHHHHHHhcCC----CCeEEEcCChH
Confidence 34556776555 223478999999988876532 111111 2233444555544333 36899999999
Q ss_pred HHHHHHHHHHcc--------CCC-CEEEEcCCCchHHH-HHHHHcCCeEEE---eecCCC---CCcCCCHHHHHHHHHHH
Q 018147 201 PAVHMMMQLLIR--------SEN-DGILCPIPQYPLYS-ASIALHGGTLVP---YYLDEA---TGWGLETSEVKKQLEAA 264 (360)
Q Consensus 201 ~al~~~~~~l~~--------~~g-d~Vlv~~P~y~~~~-~~~~~~g~~~~~---v~~~~~---~~~~~d~~~L~~~i~~~ 264 (360)
+|+..+++.... .+| ++|+...-.|.... ..+...+..... -+...+ -.| .|++++++.+++
T Consensus 108 eA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~i~~- 185 (396)
T PRK04073 108 EAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-GDLEALKAAITP- 185 (396)
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-CCHHHHHHhccc-
Confidence 999999887631 023 67888877776543 333333311000 000000 001 278889888865
Q ss_pred HhcCCCccEEEEecCCCCcccCCCHH-HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEE
Q 018147 265 KAKGITVRALVVINPGNPTGQVLAEE-NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLV 343 (360)
Q Consensus 265 ~~~g~~~k~iil~~P~NPTG~~~~~~-~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i 343 (360)
++++|+++.++||||.+++.+ .+++|.++|+++|+++|+||+|.++.+.+. ...+ +.....+|
T Consensus 186 -----~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~--~~~~-----~~~~~~pd---- 249 (396)
T PRK04073 186 -----NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGK--LFAC-----DWDNVTPD---- 249 (396)
T ss_pred -----CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcH--HHHh-----hhcCCCCC----
Confidence 688888888899999998865 699999999999999999999999655442 1111 11111245
Q ss_pred EEeccCcCcccc-ccccC
Q 018147 344 SFQSVSKGRYFH-FFSKW 360 (360)
Q Consensus 344 ~~~S~SK~~~g~-~RvGw 360 (360)
+.+|||++++| +|+||
T Consensus 250 -i~~~sK~lg~gg~~ig~ 266 (396)
T PRK04073 250 -MYILGKALGGGVFPISC 266 (396)
T ss_pred -EEEecccccCCCCcceE
Confidence 33579999875 99997
No 218
>PRK05968 hypothetical protein; Provisional
Probab=99.62 E-value=1.1e-14 Score=142.39 Aligned_cols=150 Identities=17% Similarity=0.186 Sum_probs=112.1
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchH----HHHHHHHcCCeEEEeec
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALHGGTLVPYYL 244 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~v~~ 244 (360)
..+|++.+|+++ | .+..+++++++.|+..++.+++. +||+|+++.+.|.. +...+...|++++.++.
T Consensus 65 ~~~le~~lA~l~----g----~~~av~~~sG~~Ai~~al~al~~-~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 65 VRAFEEMLAKLE----G----AEDARGFASGMAAISSTVLSFVE-PGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred HHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhC-CCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence 578888888876 3 12344556667899999888884 99999999999985 34566778999988753
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~ 324 (360)
. |++++++++ + ++|+|++++|+||++ +..++++|+++|+++|+++|+|++|....+...
T Consensus 136 ~-------d~~~l~~~i-~------~tklV~ie~pt~~~~---~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p---- 194 (389)
T PRK05968 136 R-------DEEAVAKAL-P------GAKLLYLESPTSWVF---ELQDVAALAALAKRHGVVTMIDNSWASPVFQRP---- 194 (389)
T ss_pred C-------CHHHHHHhc-c------cCCEEEEECCCCCCC---cHHHHHHHHHHHHHcCCEEEEECCCcchhccCc----
Confidence 2 788898887 3 689999987776655 556799999999999999999999987543321
Q ss_pred CHHHHHHhhCCCCCCceEEEEeccCcCccc--cccccC
Q 018147 325 SFKKVSRSMGYGEKDISLVSFQSVSKGRYF--HFFSKW 360 (360)
Q Consensus 325 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g--~~RvGw 360 (360)
+ ..+ -| +++.|+||.++| +.+.||
T Consensus 195 -~-----~~g---~D---ivv~S~tK~l~g~~~~~gG~ 220 (389)
T PRK05968 195 -I-----TLG---VD---LVIHSASKYLGGHSDTVAGV 220 (389)
T ss_pred -h-----hcC---Cc---EEEeeccccccCCCCeEEEE
Confidence 1 111 13 788899999985 356664
No 219
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.62 E-value=2.8e-14 Score=141.45 Aligned_cols=149 Identities=15% Similarity=0.209 Sum_probs=118.1
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHc--------
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI-------- 211 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~-------- 211 (360)
++.+.++++.+.+... ...+++. ..+|++++|+++ | .+++++++|+++++..++.+++
T Consensus 42 ~~~~~~~a~~~~~~~~----~~~~G~~--~~~fe~~lA~~~----g----~~~~v~~~sGt~al~~aL~al~~~~~~~~~ 107 (438)
T PRK15407 42 IDAKELQNLVDASLDF----WLTTGRF--NDAFEKKLAEFL----G----VRYALLVNSGSSANLLAFSALTSPKLGDRA 107 (438)
T ss_pred CCHHHHHHHHHHHHhC----cccCChh--HHHHHHHHHHHh----C----CCeEEEECCHHHHHHHHHHHHhhccccccC
Confidence 4555566665555431 3333332 578999999997 2 3479999999999999988762
Q ss_pred cCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHH
Q 018147 212 RSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (360)
Q Consensus 212 ~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~ 291 (360)
..+||+|+++.++|+.+...+...|++++.++++.+ +|.+|++.+++++++ ++++|+++++ +|... +
T Consensus 108 ~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~-~~~id~~~le~~i~~------~tkaVi~~~~---~G~p~---d 174 (438)
T PRK15407 108 LKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVELP-TYNIDASLLEAAVSP------KTKAIMIAHT---LGNPF---D 174 (438)
T ss_pred CCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHcCc------CCeEEEEeCC---CCChh---h
Confidence 158999999999999999999999999999998753 578999999999876 7999999875 34333 4
Q ss_pred HHHHHHHHHHcCCEEEEccCCCCC
Q 018147 292 QRAIVDFCKKEGLVLLADEVYQEN 315 (360)
Q Consensus 292 l~~i~~la~~~~i~lI~DeaY~~~ 315 (360)
+++|.++|+++|++||+|++|...
T Consensus 175 l~~I~~la~~~gi~vIeDaa~a~G 198 (438)
T PRK15407 175 LAAVKAFCDKHNLWLIEDNCDALG 198 (438)
T ss_pred HHHHHHHHHHCCCEEEEECccchh
Confidence 899999999999999999999764
No 220
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.62 E-value=2e-14 Score=138.26 Aligned_cols=127 Identities=17% Similarity=0.288 Sum_probs=109.2
Q ss_pred cCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCC
Q 018147 167 QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDE 246 (360)
Q Consensus 167 ~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~ 246 (360)
....++++.+++++ | .+++++++|+++|+..++..+...+||+|+++.++|..+...+...|++++.+++++
T Consensus 18 ~~~~~~~~~la~~~----~----~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~ 89 (352)
T cd00616 18 PKVREFEKAFAEYL----G----VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDIDP 89 (352)
T ss_pred HHHHHHHHHHHHHh----C----CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCC
Confidence 35789999999987 2 356888889999999999988324999999999999999999999999999999875
Q ss_pred CCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 247 ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 247 ~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
++|.+|++.+++.+++ ++++|+++| ++|.+.+ +++|.++|+++|+++|+|++|..
T Consensus 90 -~~~~~d~~~l~~~i~~------~~~~v~~~~---~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~ 144 (352)
T cd00616 90 -DTYNIDPELIEAAITP------RTKAIIPVH---LYGNPAD---MDAIMAIAKRHGLPVIEDAAQAL 144 (352)
T ss_pred -CcCCcCHHHHHHhcCc------CCeEEEEEC---CCCCcCC---HHHHHHHHHHcCCeEEEECCCCC
Confidence 3578999999998865 789888765 6898877 88889999999999999999975
No 221
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.62 E-value=1.8e-14 Score=140.27 Aligned_cols=194 Identities=14% Similarity=0.136 Sum_probs=132.4
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCC-CE
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DG 217 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~g-d~ 217 (360)
.-++.+++++.+.+++... .. ..+..++++.+++++.+..+ .+.+++++++++|+..+++.....+| +.
T Consensus 45 ~~~p~v~~a~~~~~~~~~~-----~~-~~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~a~~~A~~~a~~~~g~~~ 114 (377)
T PRK02936 45 HCHPTVTKAVQEQLDDIWH-----VS-NLFTNSLQEEVASLLAENSA----GDLVFFCNSGAEANEAALKLARKHTGKSK 114 (377)
T ss_pred CCCHHHHHHHHHHHHhccc-----cc-cccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHHHHHHHHHHHHHhcCCCe
Confidence 3578899999998876421 11 22356889999999977543 25799999999999999986431234 67
Q ss_pred EEEcCCCchHHHH-HHHHcCCeEE---EeecCCCCCcC--CCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccC-CCHH
Q 018147 218 ILCPIPQYPLYSA-SIALHGGTLV---PYYLDEATGWG--LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEE 290 (360)
Q Consensus 218 Vlv~~P~y~~~~~-~~~~~g~~~~---~v~~~~~~~~~--~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~-~~~~ 290 (360)
|++.++.|+.... .+...+.... ..++.++..+- .|++.+++.+.+ ++++|++..+++++|.. .+.+
T Consensus 115 vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~ii~e~i~~~~G~~~~~~~ 188 (377)
T PRK02936 115 IVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE------EVAAVMLEVVQGEGGVIPADPA 188 (377)
T ss_pred EEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC------CeEEEEEecccCCCCCccCCHH
Confidence 9999998874432 2222222111 11111110011 178899988865 68888888889998877 5789
Q ss_pred HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 291 ~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
.+++|.++|++||+++|+||+|.++.+.+. +.++... ++ .+| + .+|||++++|+|+||
T Consensus 189 ~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~--~~~~~~~--~~---~~d--i---~t~sK~l~~G~~ig~ 246 (377)
T PRK02936 189 FLQEVQTLCKKFGALLIIDEVQTGIGRTGT--LFAYEQF--GL---DPD--I---VTVAKGLGNGIPVGA 246 (377)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCcCch--hhHHHhh--CC---CCc--E---EEEcccccCCCccEE
Confidence 999999999999999999999998766553 2222111 11 244 2 379999999999997
No 222
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.62 E-value=1.2e-14 Score=142.67 Aligned_cols=199 Identities=12% Similarity=0.099 Sum_probs=130.1
Q ss_pred CCCccccCcc--CCCC---CHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET--QGLF---SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~--~~~~---p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
+.+++|+..+ ...+ ++.+.+++.+.++.... ...+....-..+|.+.++++ .| .+.+++++++++
T Consensus 40 g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~----~~----~~~~~~~~SGs~ 109 (401)
T PRK00854 40 GNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTL--TSRAFRNDQLAPLYEELAAL----TG----SHKVLPMNSGAE 109 (401)
T ss_pred CCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccc--cccccCCHHHHHHHHHHHhh----CC----CCEEEEeCCcHH
Confidence 4456666555 2233 88899999988887532 11111222234455555544 33 358999999999
Q ss_pred HHHHHHHHHcc--------CCC-CEEEEcCCCchHHHHHHHHcCCe-------------EEEeecCCCCCcCCCHHHHHH
Q 018147 202 AVHMMMQLLIR--------SEN-DGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEATGWGLETSEVKK 259 (360)
Q Consensus 202 al~~~~~~l~~--------~~g-d~Vlv~~P~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~~~d~~~L~~ 259 (360)
|+..+++.+.. .+| ++|++..-.|......+...+.. +..++ -.|++.|++
T Consensus 110 A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~ 182 (401)
T PRK00854 110 AVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-------FGDAEALEA 182 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-------CCCHHHHHH
Confidence 99999998842 123 67888887776654333332221 11111 137899999
Q ss_pred HHHHHHhcCCCccEEEEecCCCCcccCCCHH-HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCC
Q 018147 260 QLEAAKAKGITVRALVVINPGNPTGQVLAEE-NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (360)
Q Consensus 260 ~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~-~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~ 338 (360)
++.+ ++++|++++|+||+|.+++.+ .+++|.++|++||+++|+||+|.++.+.+. ... ....++ .+
T Consensus 183 ~i~~------~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~--~~~--~~~~g~---~~ 249 (401)
T PRK00854 183 AITP------NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGK--LLA--EEHEGI---EA 249 (401)
T ss_pred HhCC------CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCch--HhH--HhhcCC---CC
Confidence 8865 789999999999999999854 699999999999999999999998655442 111 101111 24
Q ss_pred CceEEEEeccCcCcccc-ccccC
Q 018147 339 DISLVSFQSVSKGRYFH-FFSKW 360 (360)
Q Consensus 339 ~~~~i~~~S~SK~~~g~-~RvGw 360 (360)
| +++ +||++++| +|+||
T Consensus 250 D--~~~---~~K~l~gg~~~ig~ 267 (401)
T PRK00854 250 D--VTL---IGKALSGGFYPVSA 267 (401)
T ss_pred C--EEE---ecccccCCccCeEE
Confidence 5 232 37998887 68886
No 223
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.61 E-value=1.9e-14 Score=141.47 Aligned_cols=198 Identities=14% Similarity=0.129 Sum_probs=128.3
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
+.+++|+..+ -..-+|++++++.+.+..... . .... ..+....+++.+.+..+ .+.+++++++++
T Consensus 39 G~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~--~---~~~~-~~~~~~~l~~~l~~~~~----~~~~~~~~sGse 108 (403)
T PRK05093 39 GKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWH--I---SNVF-TNEPALRLAKKLIDATF----AERVFFANSGAE 108 (403)
T ss_pred CCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCc--c---cCcc-CCHHHHHHHHHHHhhCC----CCEEEEeCchHH
Confidence 3445665443 223588899998888876321 1 1111 11223455555555432 368999999999
Q ss_pred HHHHHHHHHcc-------CCCCEEEEcCCCchHHHH-HHHHcCC------------eEEEeecCCCCCcCCCHHHHHHHH
Q 018147 202 AVHMMMQLLIR-------SENDGILCPIPQYPLYSA-SIALHGG------------TLVPYYLDEATGWGLETSEVKKQL 261 (360)
Q Consensus 202 al~~~~~~l~~-------~~gd~Vlv~~P~y~~~~~-~~~~~g~------------~~~~v~~~~~~~~~~d~~~L~~~i 261 (360)
|+..+++.... ...+.|+..+-.|.+... .+...|. .++.++ -.|++++++.+
T Consensus 109 A~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l 181 (403)
T PRK05093 109 ANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVP-------FNDLAAVKAVI 181 (403)
T ss_pred HHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeC-------CCCHHHHHHHh
Confidence 99999986521 023567777777766433 2222111 111111 11788998888
Q ss_pred HHHHhcCCCccEEEEecCCCCcccCC--CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCC
Q 018147 262 EAAKAKGITVRALVVINPGNPTGQVL--AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKD 339 (360)
Q Consensus 262 ~~~~~~g~~~k~iil~~P~NPTG~~~--~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~ 339 (360)
.+ ++++|+++ |.||+|.++ +.+.+++|.++|++||+++|+||+|.++.+.+. ..++... ++ .+|
T Consensus 182 ~~------~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~--~~~~~~~--~~---~pd 247 (403)
T PRK05093 182 DD------HTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGD--LFAYMHY--GV---TPD 247 (403)
T ss_pred cC------CeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc--chhhhhc--CC---CCC
Confidence 64 67777666 999998876 889999999999999999999999999877653 2221111 11 144
Q ss_pred ceEEEEeccCcCccccccccC
Q 018147 340 ISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 340 ~~~i~~~S~SK~~~g~~RvGw 360 (360)
+.||||++++|+|+||
T Consensus 248 -----i~s~sK~l~~G~rig~ 263 (403)
T PRK05093 248 -----ILTSAKALGGGFPIGA 263 (403)
T ss_pred -----EEEecccccCCcceEE
Confidence 4689999999999998
No 224
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.60 E-value=2.2e-14 Score=137.20 Aligned_cols=159 Identities=18% Similarity=0.310 Sum_probs=131.9
Q ss_pred CCCHHHHHHHHHHHHcCCCC--CC-CCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCC
Q 018147 139 LFSADSIERAWQILDQIPGR--AT-GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN 215 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~--~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~g 215 (360)
..++.|++++.+.+...... .. ..+....+.++.|+.+|+++ +.++.+|++|+|+|++++++++.+.+..+
T Consensus 54 p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI------nAd~~dIiFts~ATEs~Nlvl~~v~~~~~ 127 (428)
T KOG1549|consen 54 PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI------NADPSDIVFTSGATESNNLVLKGVARFFG 127 (428)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh------CCCCCcEEEeCCchHHHHHHHHHhhcccc
Confidence 35888999988877654221 11 33334556889999999999 56888899999999999999999876567
Q ss_pred C----EEEEcCCCchHHHHH---HHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCC
Q 018147 216 D----GILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (360)
Q Consensus 216 d----~Vlv~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~ 288 (360)
| .|++..-.|+..... ++..|..++.+|+..+ ...|.+.+++.|++ +|+++.|.+.+|-+|+++|
T Consensus 128 ~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~--~~~d~~~~~~~i~~------~T~lv~I~~Vnn~~gv~~P 199 (428)
T KOG1549|consen 128 DKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDS--GLVDISKLREAIRS------KTRLVSIMHVNNEIGVLQP 199 (428)
T ss_pred ccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCcc--ccccHHHHHHhcCC------CceEEEEEecccCcccccc
Confidence 7 899999888876554 4445999999999844 47899999999998 8999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 289 EENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 289 ~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
+++|+++|+++|+.+++|.+++-
T Consensus 200 ---v~EI~~icr~~~v~v~~DaAQav 222 (428)
T KOG1549|consen 200 ---VKEIVKICREEGVQVHVDAAQAV 222 (428)
T ss_pred ---HHHHHHHhCcCCcEEEeehhhhc
Confidence 99999999999999999999875
No 225
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.59 E-value=3.9e-14 Score=139.38 Aligned_cols=191 Identities=14% Similarity=0.110 Sum_probs=126.8
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-------C
Q 018147 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-------S 213 (360)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-------~ 213 (360)
+|.+++++.+.+..... ....|. .+...++++.+.+..+ .+.+++++++++|+..+++.... .
T Consensus 57 ~p~v~~A~~~~~~~~~~-~~~~~~-----~~~~~~la~~l~~~~~----~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~ 126 (406)
T PRK12381 57 HPALREALNEQASKFWH-TGNGYT-----NEPVLRLAKKLIDATF----ADRVFFCNSGAEANEAALKLARKYAHDRYGS 126 (406)
T ss_pred CHHHHHHHHHHHhhccc-ccCccC-----CHHHHHHHHHHHhhCC----CCeEEEcCCcHHHHHHHHHHHHHHHhhcCCC
Confidence 78899999988876422 111222 2223445555544322 46999999999999999987531 1
Q ss_pred CCCEEEEcCCCchHHHHHHHHcCCeEEE----eecCCC--CCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCC
Q 018147 214 ENDGILCPIPQYPLYSASIALHGGTLVP----YYLDEA--TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (360)
Q Consensus 214 ~gd~Vlv~~P~y~~~~~~~~~~g~~~~~----v~~~~~--~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~ 287 (360)
....|+.....|.+........+..... .++.++ .-...|++.+++.+++ ++++|++ +|.|++|.++
T Consensus 127 ~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~aavii-EPv~~~gg~~ 199 (406)
T PRK12381 127 HKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDD------QTCAVIV-EPIQGEGGVI 199 (406)
T ss_pred CCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccC------CeeEEEE-eCCcCCCCCc
Confidence 3567999999998776544433322110 011110 0012478899888864 6766666 7999999876
Q ss_pred --CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 288 --AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 288 --~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
+.+.+++|.++|++||+++|+||+|.++.+.+. ...+.. .++ .+| +.+|||++++|+|+||
T Consensus 200 ~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~--~~~~~~--~~v---~pD-----i~t~sK~l~gG~~ig~ 262 (406)
T PRK12381 200 PADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGE--LYAYMH--YGV---TPD-----VLTTAKALGGGFPIGA 262 (406)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcc--hhhhHh--hCC---CCC-----EEEehhhhhCCCceEE
Confidence 689999999999999999999999998766553 222111 111 245 3599999999999997
No 226
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.58 E-value=2.2e-13 Score=132.50 Aligned_cols=193 Identities=16% Similarity=0.101 Sum_probs=124.1
Q ss_pred CCCHHHHHHHHHHHHcCC------CCCCCCCC----CCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHH
Q 018147 139 LFSADSIERAWQILDQIP------GRATGAYS----HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQ 208 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~------~~~~~~Y~----~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~ 208 (360)
..++.+.+++.+.+.... ..+..+.. ...-+.++++.+|+++ | . ++.+++++|....+ .++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~----~--~-~~~l~~~sG~~a~~-~~~~ 89 (370)
T PRK05937 18 SRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFH----G--A-PEAFIVPSGYMANL-GLCA 89 (370)
T ss_pred CCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHh----C--C-CeEEEECChHHHHH-HHHH
Confidence 445667777766665531 11222333 2223566777777776 3 2 34477777775544 4555
Q ss_pred HHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCC
Q 018147 209 LLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (360)
Q Consensus 209 ~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~ 288 (360)
.+. ++||.|++..-.|......++......+.++ ..|+++|++.+++..+.++++.+|++++++|+||.+.+
T Consensus 90 ~~~-~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p 161 (370)
T PRK05937 90 HLS-SVTDYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP 161 (370)
T ss_pred HhC-CCCCEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC
Confidence 555 4788888878788777777776654444442 35899999999764322224556777899999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc-cccc
Q 018147 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFS 358 (360)
Q Consensus 289 ~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~Rv 358 (360)
+++|.++|+++|+++++||+|....++.. ...+. ..++ +++. .+.+.||||.+++ |.++
T Consensus 162 ---l~eI~~l~~~~~~~livDea~~~G~~g~~--g~g~~---~~~~--~~~~-~~~~~tlsK~~g~~G~~v 221 (370)
T PRK05937 162 ---LEQIIALSKKYHAHLIVDEAHAMGIFGDD--GKGFC---HSLG--YENF-YAVLVTYSKALGSMGAAL 221 (370)
T ss_pred ---HHHHHHHHHHcCCEEEEECCccccccCCC--CCchH---HhhC--CCCC-cEEEEechhhhhcCceEE
Confidence 88999999999999999999987544432 11111 1111 2332 3678999999976 6554
No 227
>PRK07505 hypothetical protein; Provisional
Probab=99.57 E-value=1.9e-13 Score=134.35 Aligned_cols=198 Identities=14% Similarity=0.066 Sum_probs=120.1
Q ss_pred CCCccccCcc-CC--CCCHHHHHHHHHHHHcCC-CCCCCCC--CCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 018147 127 HPSILDRSET-QG--LFSADSIERAWQILDQIP-GRATGAY--SHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (360)
Q Consensus 127 ~p~~l~~~~~-~~--~~p~~v~~~~~~~l~~~~-~~~~~~Y--~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~ 200 (360)
+..++|+..+ .. .-+|++++++.+.+...+ ....... .......++++.+++++ | . +.+++++| +
T Consensus 45 g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~--~~~~~~sG-~ 115 (402)
T PRK07505 45 GHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF----G--A--SVLTFTSC-S 115 (402)
T ss_pred CceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh----C--C--CEEEECCh-H
Confidence 4456777554 22 458999999999887632 1000000 01122344555555443 4 2 45556655 5
Q ss_pred HHHHHHHHHHcc---CCCC-EEEEcCCCchH-HH--HHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccE
Q 018147 201 PAVHMMMQLLIR---SEND-GILCPIPQYPL-YS--ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRA 273 (360)
Q Consensus 201 ~al~~~~~~l~~---~~gd-~Vlv~~P~y~~-~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~ 273 (360)
+|...++..+.. .+|+ .|++.+..|.+ +. ......+.+++.+|. .|++.+++++++ ++++
T Consensus 116 ~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~------~~~~ 182 (402)
T PRK07505 116 AAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKT------NKTV 182 (402)
T ss_pred HHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhc------CCCE
Confidence 666666654321 1232 36666655533 21 112223566676654 378999988865 5789
Q ss_pred EEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc
Q 018147 274 LVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY 353 (360)
Q Consensus 274 iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 353 (360)
+++++|+||||.+++ +++|.++|+++|+++|+||+|....|+........ ..++...++ ++|+++||||+|+
T Consensus 183 ~vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~----~~~~~~~~d-~~i~~~s~sK~~~ 254 (402)
T PRK07505 183 AYVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVR----SELDYRLNE-RTIIAASLGKAFG 254 (402)
T ss_pred EEEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHH----HHcCCCCCC-CeEEEEechhhhh
Confidence 999999999999999 78888999999999999999966555432111111 112110244 5899999999987
Q ss_pred c
Q 018147 354 F 354 (360)
Q Consensus 354 g 354 (360)
+
T Consensus 255 ~ 255 (402)
T PRK07505 255 A 255 (402)
T ss_pred c
Confidence 6
No 228
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.56 E-value=9.3e-14 Score=137.32 Aligned_cols=146 Identities=16% Similarity=0.141 Sum_probs=110.8
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHH----HHHHcCCeEEEeec
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHGGTLVPYYL 244 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~~ 244 (360)
...|.+.+|++. | .+..+++++++.|+..++.+++. +||+|+++...|..... .+...|++++.++
T Consensus 71 ~~~Le~~lA~l~----g----~~~av~~sSG~aAi~~al~all~-~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (436)
T PRK07812 71 QDVVEQRIAALE----G----GVAALLLASGQAAETFAILNLAG-AGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE- 140 (436)
T ss_pred HHHHHHHHHHHh----C----CCeEEEEccHHHHHHHHHHHHhC-CCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-
Confidence 456777777665 3 34567777889999999999985 99999999988876543 3444687777774
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~ 324 (360)
+. .|++++++++++ ++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|+++..-....
T Consensus 141 d~-----~d~e~l~~ai~~------~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~~~----- 201 (436)
T PRK07812 141 DP-----DDLDAWRAAVRP------NTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYLIR----- 201 (436)
T ss_pred CC-----CCHHHHHHhCCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCC-----
Confidence 21 278999988876 7999999999999999999 8999999999999999999876522211
Q ss_pred CHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 325 SFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 325 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
++ .++ .| +++.|++|.++|
T Consensus 202 pl-----~~G---aD---ivv~S~tK~lgg 220 (436)
T PRK07812 202 PL-----EHG---AD---IVVHSATKYLGG 220 (436)
T ss_pred ch-----hcC---CC---EEEEecccccCC
Confidence 11 111 23 677999998875
No 229
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.54 E-value=2.3e-13 Score=131.96 Aligned_cols=149 Identities=16% Similarity=0.266 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEc
Q 018147 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (360)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~ 221 (360)
.+.++++.+.+++.. ...+ ..-..+|.+++++++ ..++++.+++++.||.+++.++--++||+|++|
T Consensus 5 ~e~~~~v~~~l~s~~---~~~~--g~~~~~fE~~~a~~~--------g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p 71 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGW---LSTY--GPYVEEFEKEFAEYF--------GVKYAVAVSSGTSALHLALRALGLGPGDEVIVP 71 (363)
T ss_dssp HHHHHHHHHHHHHTC---CSSS--SHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEE
T ss_pred HHHHHHHHHHHHhCC---ccCC--CHHHHHHHHHHHHHh--------CCCeEEEeCChhHHHHHHHHhcCCCcCceEecC
Confidence 345566667776642 2222 233688999999988 367899999999999999999854699999999
Q ss_pred CCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHH
Q 018147 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (360)
Q Consensus 222 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~ 301 (360)
.-+|+....++...|++++.++++++ ++.+|++.+++++++ ++|+|++.|.. |... ++++|.++|++
T Consensus 72 ~~t~~~~~~ai~~~G~~pv~~Di~~~-~~~id~~~~~~~i~~------~t~ai~~~h~~---G~~~---d~~~i~~~~~~ 138 (363)
T PF01041_consen 72 AYTFPATASAILWAGAEPVFVDIDPE-TLNIDPEALEKAITP------KTKAILVVHLF---GNPA---DMDAIRAIARK 138 (363)
T ss_dssp SSS-THHHHHHHHTT-EEEEE-BETT-TSSB-HHHHHHHHHT------TEEEEEEE-GG---GB------HHHHHHHHHH
T ss_pred CCcchHHHHHHHHhccEEEEEeccCC-cCCcCHHHHHHHhcc------CccEEEEecCC---CCcc---cHHHHHHHHHH
Confidence 99999999999999999999999965 589999999999998 89999988762 3333 49999999999
Q ss_pred cCCEEEEccCCCCCc
Q 018147 302 EGLVLLADEVYQENV 316 (360)
Q Consensus 302 ~~i~lI~DeaY~~~~ 316 (360)
+|++||+|.++....
T Consensus 139 ~~i~lIeD~a~a~g~ 153 (363)
T PF01041_consen 139 HGIPLIEDAAQAFGA 153 (363)
T ss_dssp TT-EEEEE-TTTTT-
T ss_pred cCCcEEEccccccCc
Confidence 999999999998743
No 230
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.54 E-value=1e-13 Score=132.01 Aligned_cols=160 Identities=16% Similarity=0.275 Sum_probs=131.6
Q ss_pred CCCCHHHHHHHHHHHHcCC--CCCCCCCCC--CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH--c
Q 018147 138 GLFSADSIERAWQILDQIP--GRATGAYSH--SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL--I 211 (360)
Q Consensus 138 ~~~p~~v~~~~~~~l~~~~--~~~~~~Y~~--~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l--~ 211 (360)
..+.+++++++...+.... ....+.|+- ...+++.|+.||+.+ ++++++|++|+|+||+.++++... .
T Consensus 11 Tp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll------ga~~~eIiFTSG~TEsnNlaI~g~~~a 84 (386)
T COG1104 11 TPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL------GADPEEIIFTSGATESNNLAIKGAALA 84 (386)
T ss_pred CCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh------CCCCCeEEEecCCcHHHHHHHHhhHHh
Confidence 3557889999888877651 113444542 334677788888887 578899999999999999999873 2
Q ss_pred c---CCCCEEEEcCCCchHHHHHHHHc---CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCccc
Q 018147 212 R---SENDGILCPIPQYPLYSASIALH---GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (360)
Q Consensus 212 ~---~~gd~Vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~ 285 (360)
. ..|..|+++.-.++...+.++.+ |.++.+++++.++ .+|+++|+++|++ ++.+|.|...||-||.
T Consensus 85 ~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G--~v~~e~L~~al~~------~T~LVSim~aNnE~G~ 156 (386)
T COG1104 85 YRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNG--LVDLEQLEEALRP------DTILVSIMHANNETGT 156 (386)
T ss_pred hhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCC--eEcHHHHHHhcCC------CceEEEEEecccCeee
Confidence 1 24789999999999888877776 9999999999864 7899999999987 7889999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 286 VLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 286 ~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
+.| +++|.++|+++++++++|.+..-
T Consensus 157 IQp---I~ei~~i~k~~~i~fHvDAvQa~ 182 (386)
T COG1104 157 IQP---IAEIGEICKERGILFHVDAVQAV 182 (386)
T ss_pred ccc---HHHHHHHHHHcCCeEEEehhhhc
Confidence 999 99999999999999999988754
No 231
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.54 E-value=2e-13 Score=130.81 Aligned_cols=146 Identities=14% Similarity=0.243 Sum_probs=122.5
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEE
Q 018147 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (360)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv 220 (360)
-.+.++++.+.+++. +...++. ..+|.+++++|+ .....+.++++|.|+.+++++|.-+|||+|++
T Consensus 14 ~~~e~~~v~~vl~sg----~i~~G~~--v~~FE~~~ae~~--------G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ 79 (374)
T COG0399 14 GEEELAAVQEVLKSG----WLTGGPF--VRRFEQAFAEYL--------GVKYAVAVSSGTAALHLALLALAIGPGDEVIV 79 (374)
T ss_pred chHHHHHHHHHHHcC----CeecChH--HHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhcCCCCCCEEEe
Confidence 455666777777763 3334332 688999999997 46788999999999999999664469999999
Q ss_pred cCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecC-CCCcccCCCHHHHHHHHHHH
Q 018147 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP-GNPTGQVLAEENQRAIVDFC 299 (360)
Q Consensus 221 ~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P-~NPTG~~~~~~~l~~i~~la 299 (360)
+.-+|....+.+...|+++++++++++ +|.+|++.+|++|++ ++|+|+..|- .+|. + +++|.++|
T Consensus 80 ps~TfvATan~i~~~Ga~PVFvDid~~-T~nid~~~ie~aIt~------~tKAIipVhl~G~~~----d---m~~i~~la 145 (374)
T COG0399 80 PSFTFVATANAVLLVGAKPVFVDIDPD-TLNIDPDLIEAAITP------RTKAIIPVHLAGQPC----D---MDAIMALA 145 (374)
T ss_pred cCCchHHHHHHHHHcCCeEEEEecCCc-ccCCCHHHHHHHccc------CCeEEEEehhccCCC----C---HHHHHHHH
Confidence 999999999999999999999999976 689999999999998 7999998865 4543 4 99999999
Q ss_pred HHcCCEEEEccCCCC
Q 018147 300 KKEGLVLLADEVYQE 314 (360)
Q Consensus 300 ~~~~i~lI~DeaY~~ 314 (360)
++||++||+|.+++.
T Consensus 146 ~~~~l~vIEDaAqa~ 160 (374)
T COG0399 146 KRHGLPVIEDAAQAH 160 (374)
T ss_pred HHcCCeEEEEcchhc
Confidence 999999999999765
No 232
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.53 E-value=2.3e-13 Score=133.44 Aligned_cols=206 Identities=11% Similarity=0.041 Sum_probs=127.5
Q ss_pred CCccccCcc--C---CCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 018147 128 PSILDRSET--Q---GLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (360)
Q Consensus 128 p~~l~~~~~--~---~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~a 202 (360)
.+++|+..+ . .--+|++++++.+.++.... ....-. ....+.+++.+.+..| .+.+++++++++|
T Consensus 31 ~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~--~~~~~~----~~~~~~~~~~l~~~~~----~~~~~~~~SGs~A 100 (400)
T PTZ00125 31 KKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTL--TSRAFY----NDVLGLAEKYITDLFG----YDKVLPMNSGAEA 100 (400)
T ss_pred CEEEEcccCHhhccCCcCCHHHHHHHHHHHHhccc--cccccc----CHHHHHHHHHHHhCCC----CCEEEEeCCcHHH
Confidence 345565544 1 12488899999888776432 111101 1233444555544333 3678899999999
Q ss_pred HHHHHHHHcc---------CCCCEEEEcCCCchHHHHH-HHHcCCeEEE---eecCCCC-C-cCCCHHHHHHHHHHHHhc
Q 018147 203 VHMMMQLLIR---------SENDGILCPIPQYPLYSAS-IALHGGTLVP---YYLDEAT-G-WGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 203 l~~~~~~l~~---------~~gd~Vlv~~P~y~~~~~~-~~~~g~~~~~---v~~~~~~-~-~~~d~~~L~~~i~~~~~~ 267 (360)
...+++.+.. ..++.|++.+-.|...... +...+..... .+...+- . ...|+++|++.++.
T Consensus 101 ~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---- 176 (400)
T PTZ00125 101 GETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQD---- 176 (400)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCC----
Confidence 9999987641 0347788888777654433 3322221110 0110000 0 01379999998852
Q ss_pred CCCccEEEEecCCCCcccCCCH-HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEe
Q 018147 268 GITVRALVVINPGNPTGQVLAE-ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (360)
Q Consensus 268 g~~~k~iil~~P~NPTG~~~~~-~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~ 346 (360)
.++++|++..++||||.+++. +.+++|.++|++||+++|+||+|.++.+.+. .... .. .+ ..+| ++
T Consensus 177 -~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~--~~~~-~~-~~---~~pd--~~--- 243 (400)
T PTZ00125 177 -PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGK--LLAH-DH-EG---VKPD--IV--- 243 (400)
T ss_pred -CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch--hhHH-Hh-cC---CCCC--EE---
Confidence 168889888889999999974 5599999999999999999999988655543 1111 00 11 1245 23
Q ss_pred ccCcCccccc-cccC
Q 018147 347 SVSKGRYFHF-FSKW 360 (360)
Q Consensus 347 S~SK~~~g~~-RvGw 360 (360)
++||++++|. |+||
T Consensus 244 ~~sK~l~~g~~~ig~ 258 (400)
T PTZ00125 244 LLGKALSGGLYPISA 258 (400)
T ss_pred EEcccccCCCcCcEE
Confidence 4789999886 9997
No 233
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.53 E-value=4.9e-13 Score=132.39 Aligned_cols=214 Identities=12% Similarity=0.103 Sum_probs=128.7
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
...++|+..+ ..--++++.+++.+.+.+... .+....+.+. ..++|+++....+.+.. +.+++++++++
T Consensus 40 G~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~----~~~~~~~~~~-~~~la~~l~~~~~~~~~-~~~~f~~sGse 113 (425)
T PRK08088 40 GREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSH----TCFQVLAYEP-YLELCEKMNQKVPGDFA-KKTLLVTTGSE 113 (425)
T ss_pred CCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCC----ccccccCCHH-HHHHHHHHHHhCCCCCC-CEEEEeCCcHH
Confidence 4456666554 122388899999888876421 1222222333 34778888776553332 35666666667
Q ss_pred HHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHcCCeEE----------------EeecCCCCCcCC--CHHHHHHHHH
Q 018147 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLV----------------PYYLDEATGWGL--ETSEVKKQLE 262 (360)
Q Consensus 202 al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~----------------~v~~~~~~~~~~--d~~~L~~~i~ 262 (360)
|+..+++.... .....|+...++|.+....+...+.... ++|.+.. +... +++.|++.++
T Consensus 114 a~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~~l~ 192 (425)
T PRK08088 114 AVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH-GVSEDDAIASIERIFK 192 (425)
T ss_pred HHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcccc-CccHHHHHHHHHHHHH
Confidence 66666655431 1235677779999887765555443211 1222111 1111 1445777665
Q ss_pred HHHhcCCCccEEEEe-cCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCce
Q 018147 263 AAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDIS 341 (360)
Q Consensus 263 ~~~~~g~~~k~iil~-~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 341 (360)
.. ....++.++++. ..+|+.....+.+.+++|.++|+++|+++|+||+|.++.+.+. ..++.. . . .
T Consensus 193 ~~-~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~--~~~~~~----~-~-----~ 259 (425)
T PRK08088 193 ND-AAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGT--LFAMEQ----M-G-----V 259 (425)
T ss_pred hc-cCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc--hhHHhh----c-C-----C
Confidence 21 111245555544 3378877888999999999999999999999999998655442 222211 1 1 1
Q ss_pred EEEEeccCcCccccccccC
Q 018147 342 LVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 342 ~i~~~S~SK~~~g~~RvGw 360 (360)
..-+.||||++++|+|+||
T Consensus 260 ~pdi~s~sK~l~~G~rig~ 278 (425)
T PRK08088 260 AADLTTFAKSIAGGFPLAG 278 (425)
T ss_pred CCCEEEEeccccCCCccee
Confidence 2337899999999999998
No 234
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.52 E-value=5.2e-13 Score=129.72 Aligned_cols=185 Identities=16% Similarity=0.207 Sum_probs=136.3
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCC-CCCCCCC----cCcHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHH
Q 018147 137 QGLFSADSIERAWQILDQIPGRA-TGAYSHS----QGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLL 210 (360)
Q Consensus 137 ~~~~p~~v~~~~~~~l~~~~~~~-~~~Y~~~----~G~~~lr~~ia~~l~~~~g~~~~~-~~I~~t~Ga~~al~~~~~~l 210 (360)
+...|+.+++++.+.+....... ...+... .-+.+.|+.+++++ ++++ ++|++++|++++++.++..+
T Consensus 8 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~l------g~~~~~~v~~~~~~t~a~~~~~~~l 81 (371)
T PF00266_consen 8 TGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLL------GAPPDEEVVFTSNGTEALNAVASSL 81 (371)
T ss_dssp S-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHH------TSSTTEEEEEESSHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhc------CCccccccccccccchhhhhhhhcc
Confidence 44678999999988877542211 1112111 22456677777777 3566 78999999999999999999
Q ss_pred ---ccCCCCEEEEcCCCchHHH----HHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCc
Q 018147 211 ---IRSENDGILCPIPQYPLYS----ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT 283 (360)
Q Consensus 211 ---~~~~gd~Vlv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPT 283 (360)
. .+||+|++..-.|+... ...+..|.++..++.+.++ .+|++++++++++ +++++++++.+|-|
T Consensus 82 ~~~~-~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~--~~~~~~~~~~l~~------~~~lv~~~~~~~~t 152 (371)
T PF00266_consen 82 LNPL-KPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGG--SLDLEDLEEALNP------DTRLVSISHVENST 152 (371)
T ss_dssp HHHG-TTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTS--SCSHHHHHHHHHT------TESEEEEESBETTT
T ss_pred cccc-ccccccccccccccccccccccccccchhhhccccccccc--hhhhhhhhhhhcc------ccceEEeecccccc
Confidence 5 49999999999988655 4445679999999887653 7899999999976 89999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcccc
Q 018147 284 GQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFH 355 (360)
Q Consensus 284 G~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~ 355 (360)
|...+ +++|.++|+++|+++++|.++.--...- .+ ..+ ..| +++.|.-| +.|.
T Consensus 153 G~~~p---i~~I~~~~~~~~~~~~vD~~~~~g~~~i-----d~----~~~---~~D---~~~~s~~K-l~gp 205 (371)
T PF00266_consen 153 GVRNP---IEEIAKLAHEYGALLVVDAAQSAGCVPI-----DL----DEL---GAD---FLVFSSHK-LGGP 205 (371)
T ss_dssp TBBSS---HHHHHHHHHHTTSEEEEE-TTTTTTSS-------T----TTT---TES---EEEEESTS-TTSS
T ss_pred cEEee---eceehhhhhccCCceeEechhccccccc-----cc----ccc---ccc---eeeecccc-cCCC
Confidence 99999 9999999999999999999987632211 11 111 123 68889999 6654
No 235
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.50 E-value=8.5e-13 Score=128.52 Aligned_cols=199 Identities=16% Similarity=0.182 Sum_probs=131.9
Q ss_pred CCccccCcc----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHH
Q 018147 128 PSILDRSET----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPA 202 (360)
Q Consensus 128 p~~l~~~~~----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~I~~t~Ga~~a 202 (360)
..++|+..+ ..+..|++++++.+.+.... .+... -..++++++++.+.. .++ .++++++++++
T Consensus 29 ~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~-----~~~~~-~~~~~~~~la~~l~~------~~~~~~~~~~SGseA 96 (375)
T PRK04260 29 KKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIW-----HSPNL-YLNSLQEEVAQKLIG------DKDYLAFFCNSGAEA 96 (375)
T ss_pred CEEEECCCCcccccCCCCHHHHHHHHHHHHhcC-----cccCc-cCCHHHHHHHHHHhc------CcCCEEEEcCccHHH
Confidence 345666444 23557889999988887632 12221 246788889887632 133 36889999999
Q ss_pred HHHHHHHHcc-CCCCEEEEcCCCchHHH-HHHHHcCCeEE---------EeecCCCCCcCCCHHHHHHHHHHHHhcCCCc
Q 018147 203 VHMMMQLLIR-SENDGILCPIPQYPLYS-ASIALHGGTLV---------PYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (360)
Q Consensus 203 l~~~~~~l~~-~~gd~Vlv~~P~y~~~~-~~~~~~g~~~~---------~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~ 271 (360)
+..+++.... ..+++|++.+..|.... ..+...|.... .++... ..|++.+++.+.+ ++
T Consensus 97 ~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~dl~~l~~~l~~------~~ 166 (375)
T PRK04260 97 NEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI----FNDLNSVKALVNK------NT 166 (375)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC----CCCHHHHHHhcCC------Ce
Confidence 9988877531 24678999888887533 33333232111 011100 1378888887754 67
Q ss_pred cEEEEecCCCCcccCCC-HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCc
Q 018147 272 RALVVINPGNPTGQVLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSK 350 (360)
Q Consensus 272 k~iil~~P~NPTG~~~~-~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK 350 (360)
.+|++..++|++|.+.+ .+.++++.++|+++|+++|+||+|.++...+. ..++.. .++ .|| +.||||
T Consensus 167 a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~--~~~~~~--~~~---~pd-----i~t~sK 234 (375)
T PRK04260 167 AAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGK--LYAFEH--YGI---EPD-----IFTLAK 234 (375)
T ss_pred EEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc--hhhhHh--hCC---CCC-----EEEecc
Confidence 78888888999998765 56799999999999999999999998654432 222111 111 256 338999
Q ss_pred CccccccccC
Q 018147 351 GRYFHFFSKW 360 (360)
Q Consensus 351 ~~~g~~RvGw 360 (360)
++++|+|+||
T Consensus 235 ~l~~G~~ig~ 244 (375)
T PRK04260 235 GLANGVPVGA 244 (375)
T ss_pred cccCCcceEE
Confidence 9999999997
No 236
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.50 E-value=9.8e-13 Score=129.45 Aligned_cols=174 Identities=17% Similarity=0.210 Sum_probs=116.4
Q ss_pred CCccccCcc-CCCCCHHHHHHHHHHHHcCCCCCC-CCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHH
Q 018147 128 PSILDRSET-QGLFSADSIERAWQILDQIPGRAT-GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHM 205 (360)
Q Consensus 128 p~~l~~~~~-~~~~p~~v~~~~~~~l~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~ 205 (360)
+.++.|+.+ ....|..+.+++.+.+........ ..|....+...+.+++.+ + +..| +++++|++|+|++++++.
T Consensus 26 ~~~iyld~~a~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g--~~~~~v~~~~~~t~~l~~ 101 (406)
T TIGR01814 26 NAVIYLDGNSLGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVG--AKEDEVVVMNTLTINLHL 101 (406)
T ss_pred CCcEEecCCCcCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccC--CCCCcEEEeCCchHHHHH
Confidence 344555544 224477777887766654321001 111101111222222222 1 2234 678999999999999999
Q ss_pred HHHHHccCCC---CEEEEcCCCchHH----HHHHHHcCCeE----EEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEE
Q 018147 206 MMQLLIRSEN---DGILCPIPQYPLY----SASIALHGGTL----VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRAL 274 (360)
Q Consensus 206 ~~~~l~~~~g---d~Vlv~~P~y~~~----~~~~~~~g~~~----~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~i 274 (360)
++..+.. ++ +.|++....|+.. ...++..|+++ +.++.+. ++.+|++.+++.++.. ++++++|
T Consensus 102 ~~~~~~~-~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~--~g~~~~~~l~~~~~~~---~~~t~lv 175 (406)
T TIGR01814 102 LLASFYK-PTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPRE--EETLRLEDILDTIEKN---GDDIAVI 175 (406)
T ss_pred HHHHhcC-CcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCC--CCccCHHHHHHHHHhc---CCCeEEE
Confidence 9998763 54 3688888899863 23445678887 3444433 3467999999887531 2378999
Q ss_pred EEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 275 VVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 275 il~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
++++++|.||.+++ +++|+++|+++|+++++|+++.-
T Consensus 176 ~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~ 212 (406)
T TIGR01814 176 LLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAV 212 (406)
T ss_pred EEeccccccceecC---HHHHHHHHHHcCCEEEEEccccc
Confidence 99999999999998 99999999999999999999876
No 237
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.49 E-value=9.2e-13 Score=128.35 Aligned_cols=145 Identities=19% Similarity=0.205 Sum_probs=112.9
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHH----HHHcCCeEEEeec
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALHGGTLVPYYL 244 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~----~~~~g~~~~~v~~ 244 (360)
...|.+.+|++ .| .+..+++++++.|+..++..+++ +||+|+++...|.+.... ++..|.++..++.
T Consensus 64 ~~~le~~la~L----Eg----~~~a~~~~SGmaAi~~~~~~ll~-~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~ 134 (395)
T PRK08114 64 HFSLQEAMCEL----EG----GAGCALYPCGAAAVANAILAFVE-QGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP 134 (395)
T ss_pred HHHHHHHHHHH----hC----CCeEEEEhHHHHHHHHHHHHHcC-CCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence 44555555554 23 46788888899999999998884 999999999888766554 4667999888763
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcC--CEEEEccCCCCCccCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG--LVLLADEVYQENVYVPEKK 322 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~--i~lI~DeaY~~~~~~~~~~ 322 (360)
.|.+++++++++ ++|+|++.+|.||||.+.+ +++|+++|+++| +++++|.++..-..-..
T Consensus 135 -------~d~~~l~~~l~~------~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~p-- 196 (395)
T PRK08114 135 -------LIGADIAKLIQP------NTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVLFKA-- 196 (395)
T ss_pred -------CCHHHHHHhcCC------CceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccccCH--
Confidence 367889998876 7999999999999999998 999999999984 99999999976332111
Q ss_pred CCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 323 ~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
..++ -| |+++|.+|.++|
T Consensus 197 --------l~~G---aD---ivv~S~tKyl~G 214 (395)
T PRK08114 197 --------LDFG---ID---ISIQAGTKYLVG 214 (395)
T ss_pred --------HHcC---Cc---EEEEcCcccccC
Confidence 1122 23 899999998876
No 238
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.49 E-value=9.4e-13 Score=130.26 Aligned_cols=146 Identities=17% Similarity=0.206 Sum_probs=109.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHH----HHHHHcCCeEEEeec
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS----ASIALHGGTLVPYYL 244 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~----~~~~~~g~~~~~v~~ 244 (360)
...+++.+++++ | . .+.|++++| +.|+..++..++ .+||+|+++...|.... ..+...|++++.++
T Consensus 71 ~~~le~~la~l~----g--~-~~~v~fsSG-~~Ai~~al~~ll-~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (437)
T PRK05613 71 VEALENRIASLE----G--G-VHAVAFASG-QAAETAAILNLA-GAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE- 140 (437)
T ss_pred HHHHHHHHHHHh----C--C-CeEEEeCCH-HHHHHHHHHHhc-CCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-
Confidence 456666666665 3 1 244555555 588888888887 49999999999998763 45577899999887
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~ 324 (360)
+. .|++++++++++ ++++|++.++.||+|.+.+ +++|+++|+++|+++|+|.++...... .
T Consensus 141 ~~-----~d~e~l~~~l~~------~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~~-----~ 201 (437)
T PRK05613 141 NP-----DDPESWQAAVQP------NTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAALV-----R 201 (437)
T ss_pred CC-----CCHHHHHHhCCc------cCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCcccccc-----C
Confidence 22 278999999877 7999999999999999988 999999999999999999998652221 1
Q ss_pred CHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 325 SFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 325 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
++ .++ -| +++.|+.|.++|
T Consensus 202 p~-----~~G---aD---ivv~S~~K~l~G 220 (437)
T PRK05613 202 PL-----ELG---AD---VVVASLTKFYTG 220 (437)
T ss_pred hH-----HhC---CC---EEEeeccceecC
Confidence 11 122 23 889999998876
No 239
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.48 E-value=9.6e-13 Score=127.92 Aligned_cols=145 Identities=19% Similarity=0.256 Sum_probs=110.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHH----cCCeEEEeec
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVPYYL 244 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~----~g~~~~~v~~ 244 (360)
...|.+.+|+.. | .+.++++++++.|+..++.++++ +||+|+++...|......++. .|.++..++.
T Consensus 57 ~~~le~~la~Le----~----g~~a~~~~SGmaAi~~~l~~ll~-~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~ 127 (386)
T PF01053_consen 57 VRALEQRLAALE----G----GEDALLFSSGMAAISAALLALLK-PGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP 127 (386)
T ss_dssp HHHHHHHHHHHH----T-----SEEEEESSHHHHHHHHHHHHS--TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST
T ss_pred HHHHHHHHHHhh----c----ccceeeccchHHHHHHHHHhhcc-cCCceEecCCccCcchhhhhhhhcccCcEEEEeCc
Confidence 344555555543 3 37799999999999999999995 999999999999877655554 6898888753
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcC-CEEEEccCCCCCccCCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG-LVLLADEVYQENVYVPEKKF 323 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~-i~lI~DeaY~~~~~~~~~~~ 323 (360)
-|++++++++++ ++++|++..|.||+..+.+ +++|+++|+++| +++|+|+.+....+-.
T Consensus 128 -------~d~~~l~~~l~~------~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~~~---- 187 (386)
T PF01053_consen 128 -------TDLEALEAALRP------NTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYNQN---- 187 (386)
T ss_dssp -------TSHHHHHHHHCT------TEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC-----
T ss_pred -------hhHHHHHhhccc------cceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceeeec----
Confidence 378999999987 8999999999999988887 999999999998 9999999998743321
Q ss_pred CCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 324 ~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
++ .++ -| |+++|.+|.++|
T Consensus 188 -pL-----~~G---aD---ivv~S~TKyl~G 206 (386)
T PF01053_consen 188 -PL-----ELG---AD---IVVHSATKYLSG 206 (386)
T ss_dssp -GG-----GGT----S---EEEEETTTTTTT
T ss_pred -cC-----cCC---ce---EEEeeccccccC
Confidence 11 111 13 899999998876
No 240
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.48 E-value=1.2e-11 Score=122.04 Aligned_cols=140 Identities=10% Similarity=0.110 Sum_probs=109.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH-HHHHHHHHHHcc-C-CCCEEEEcCCCchHHHHHHHHcCCeEEEeec-
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGAS-PAVHMMMQLLIR-S-ENDGILCPIPQYPLYSASIALHGGTLVPYYL- 244 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~-~al~~~~~~l~~-~-~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~- 244 (360)
...+.+.+.+.+.+..|.. +.+..++++|+| .++.+++.++-. . +||.|+++.-+|.....++...|++++.++.
T Consensus 103 ~~~l~~~~e~~~~~~~G~~-~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~ 181 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLR-SIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETV 181 (444)
T ss_pred HHHHHHHHHHHHHHHcCCC-CCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeee
Confidence 5666667777776666743 124688888888 588777777641 1 5899999999999999999999999999996
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
.++++|.+|+++|+++|++. +.+..++++++|+ |+.....+++++|+++|++||+++|+|++|+.
T Consensus 182 ~d~~~~~iD~e~Le~aIt~~---~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~ 246 (444)
T TIGR03531 182 LDGDELTTDVEDIERAIEEI---GPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGL 246 (444)
T ss_pred ecCcCCCcCHHHHHHHHHhc---cCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcC
Confidence 24457999999999999852 1134566766776 66666677899999999999999999999985
No 241
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.46 E-value=2.5e-12 Score=126.19 Aligned_cols=193 Identities=12% Similarity=0.104 Sum_probs=119.3
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc------C
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------S 213 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~------~ 213 (360)
-+|++++++.+.++..... ...|. .+....+++.+.+..+ .+.+++++++++|...+++.... +
T Consensus 52 ~~p~v~~a~~~~~~~~~~~-~~~~~-----~~~~~~la~~L~~~~~----~~~~~f~~SGseA~e~Alk~ar~~~~~~~~ 121 (397)
T TIGR03246 52 AHPELVKALIEQADKLWHI-GNGYT-----NEPVLRLAKKLVDATF----ADKVFFCNSGAEANEAALKLARRYALDKHG 121 (397)
T ss_pred CCHHHHHHHHHHHHhcccc-cCccC-----CHHHHHHHHHHHhhCC----CCEEEEeCCcHHHHHHHHHHHHHHHHhcCC
Confidence 4888999999888763210 11222 2334455555554333 36899999999999999997621 0
Q ss_pred -CCCEEEEcCCCchHHHH-HHHHcCCeEEE---eecCCCC-Cc-CCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccC
Q 018147 214 -ENDGILCPIPQYPLYSA-SIALHGGTLVP---YYLDEAT-GW-GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (360)
Q Consensus 214 -~gd~Vlv~~P~y~~~~~-~~~~~g~~~~~---v~~~~~~-~~-~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~ 286 (360)
..+.|+..+-.|..... .+...+..... -|...+- .+ ..|++.+++.+.+ ++++|++..++++.|..
T Consensus 122 ~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~aavi~Epi~~~~G~~ 195 (397)
T TIGR03246 122 ADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISD------KTCAVIVEPIQGEGGVV 195 (397)
T ss_pred CCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhcc------CeEEEEEecccCCCCCc
Confidence 23567777777766533 33333321100 0000000 00 1278999988864 67777766334444544
Q ss_pred C-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 287 L-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 287 ~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
. +.+.+++|.++|++||+++|+||+|.++...+. ....... ++ .+| +-++||++++|+++||
T Consensus 196 ~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~--~~a~~~~--gv---~pD-----i~t~~K~lggG~piga 258 (397)
T TIGR03246 196 PADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGE--LYAYMHY--GV---TPD-----ILTSAKALGGGFPIGA 258 (397)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEechhhcCCcccc--chhhhhc--CC---CCC-----EEEeehhhhCCcceeE
Confidence 3 789999999999999999999999988755443 2221111 11 255 2378999999999997
No 242
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.45 E-value=1.2e-11 Score=119.42 Aligned_cols=201 Identities=15% Similarity=0.157 Sum_probs=141.0
Q ss_pred CCCccccCcc---CCCCCHHHHHHHHHHHHcCCCCCCC----CCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCCh
Q 018147 127 HPSILDRSET---QGLFSADSIERAWQILDQIPGRATG----AYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGA 199 (360)
Q Consensus 127 ~p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~----~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga 199 (360)
.+.++||++| ...-.+++++++.+.+++.+. +.. -++...-+.+|.+.+|+|+ | .+.-+++++|-
T Consensus 38 ~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~-g~~gsR~i~G~~~~h~~LE~~lA~f~----g---~e~al~f~SGy 109 (388)
T COG0156 38 GRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGV-GAGGSRLISGTSDLHVELEEELADFL----G---AEAALLFSSGF 109 (388)
T ss_pred CceeEeeeccCcccccCCHHHHHHHHHHHHHhCC-CCCCcCcccCCcHHHHHHHHHHHHHh----C---CCcEEEEcccc
Confidence 4667888888 556688899999999988532 122 2333333556666666665 4 23455666665
Q ss_pred HHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecC
Q 018147 200 SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (360)
Q Consensus 200 ~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P 279 (360)
.|...++.+|+. ++|-|+...-.|....+.++..+++++.+.. .|++.|++.+++.+..+.+.+.|+...-
T Consensus 110 -~AN~~~i~~l~~-~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~IvtegV 180 (388)
T COG0156 110 -VANLGLLSALLK-KGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTEGV 180 (388)
T ss_pred -hhHHHHHHHhcC-CCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEecc
Confidence 455566778884 8999999999999999999999999998864 4789999999886533332334443343
Q ss_pred CCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc
Q 018147 280 GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY 353 (360)
Q Consensus 280 ~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 353 (360)
-.=.|-+-+ +++|++++++|+.++++||+|+--++++.. ..+.... ++.. .+ ..|.++||||+|+
T Consensus 181 fSMdGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~G--rG~~e~~-g~~~--~~-vdi~~gTlsKAlG 245 (388)
T COG0156 181 FSMDGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPNG--RGLAEHF-GLEP--EE-VDIIVGTLGKALG 245 (388)
T ss_pred ccCCCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCCC--ccHHHHh-CCCC--cc-ceEEEEEchhhhc
Confidence 333677777 999999999999999999999999998642 2222221 1111 12 3699999999886
No 243
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.44 E-value=1.7e-11 Score=121.15 Aligned_cols=199 Identities=15% Similarity=0.057 Sum_probs=133.2
Q ss_pred CCccccCcc---CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCc----HHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 018147 128 PSILDRSET---QGLFSADSIERAWQILDQIPGRATGAYSHSQGI----KGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (360)
Q Consensus 128 p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~----~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~ 200 (360)
.++++|+.+ .....+++++++.+.+++.+. +..+=.-..|. .+|.+.+|+|+ | .+..++.+.+.
T Consensus 102 r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~-g~~gSrl~~G~~~~h~~LE~~LA~f~----g----~e~all~sSGy 172 (476)
T PLN02955 102 KKLLLFSGNDYLGLSSHPTISNAAANAAKEYGM-GPKGSALICGYTTYHRLLESSLADLK----K----KEDCLVCPTGF 172 (476)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHHcCC-CCCCcCccccChHHHHHHHHHHHHHH----C----CCcEEEECChH
Confidence 356677777 556688899999998887653 22222223344 56777777776 3 34555555555
Q ss_pred HHHHHHHHHHc-------------cCCCCEEEEcCCCchHHHHHHHHc----CCeEEEeecCCCCCcCCCHHHHHHHHHH
Q 018147 201 PAVHMMMQLLI-------------RSENDGILCPIPQYPLYSASIALH----GGTLVPYYLDEATGWGLETSEVKKQLEA 263 (360)
Q Consensus 201 ~al~~~~~~l~-------------~~~gd~Vlv~~P~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 263 (360)
.|...++.+|. .+.+|.|+...-.|......++.. +++++.++. -|++.|++.++.
T Consensus 173 ~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le~~L~~ 245 (476)
T PLN02955 173 AANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLNSLLSS 245 (476)
T ss_pred HHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHHHHHHh
Confidence 55555555552 135677888888898888888876 466666653 379999999875
Q ss_pred HHhcCCCccEEEEecC-CCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceE
Q 018147 264 AKAKGITVRALVVINP-GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISL 342 (360)
Q Consensus 264 ~~~~g~~~k~iil~~P-~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 342 (360)
... +. .+|++.+ -++.|-+.+ +++|.++|++||.++|+||+|..++++.. -...... ++ ..++ ..
T Consensus 246 ~~~---~~-~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~--G~G~~e~---~g-~~~d-i~ 311 (476)
T PLN02955 246 CKM---KR-KVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGEN--GGGVAEE---FN-CEAD-VD 311 (476)
T ss_pred CCC---Cc-eEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCC--CCcHHHH---hC-CCCC-Cc
Confidence 321 23 4555555 788999999 88899999999999999999999888753 1222221 11 0134 46
Q ss_pred EEEeccCcCcc--ccc
Q 018147 343 VSFQSVSKGRY--FHF 356 (360)
Q Consensus 343 i~~~S~SK~~~--g~~ 356 (360)
|+++||||+|+ ||.
T Consensus 312 ii~~TLsKA~G~~GGf 327 (476)
T PLN02955 312 LCVGTLSKAAGCHGGF 327 (476)
T ss_pred EEEEeCccchhccCce
Confidence 99999999987 665
No 244
>PLN02624 ornithine-delta-aminotransferase
Probab=99.41 E-value=9.6e-12 Score=124.66 Aligned_cols=208 Identities=12% Similarity=0.096 Sum_probs=127.3
Q ss_pred CCCccccCcc--CC---CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET--QG---LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~--~~---~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
...+||+..+ .. --+|.+++++.+.+..... ....|. .....+|.+.++++ .+ .+.+++++++++
T Consensus 74 G~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~-~~~~~~-~~~~~~la~~L~~~----~~----~~~~~f~~SGse 143 (474)
T PLN02624 74 GKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTL-SSRAFY-NDKFPEFAEYLTSM----FG----YDMVLPMNTGAE 143 (474)
T ss_pred CCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCC-cccccC-CHHHHHHHHHHHhh----cC----CCeEEEeCChHH
Confidence 4556777555 12 2289999999998887542 111122 22234444444443 33 368999999999
Q ss_pred HHHHHHHHHcc------C-C-CC-EEEEcCCCchHHHHHHHHcCCeEE-E---eecCCCC---CcCCCHHHHHHHHHHHH
Q 018147 202 AVHMMMQLLIR------S-E-ND-GILCPIPQYPLYSASIALHGGTLV-P---YYLDEAT---GWGLETSEVKKQLEAAK 265 (360)
Q Consensus 202 al~~~~~~l~~------~-~-gd-~Vlv~~P~y~~~~~~~~~~g~~~~-~---v~~~~~~---~~~~d~~~L~~~i~~~~ 265 (360)
|+..+++.... + + +. .|+...-.|.+............. . .|..++- .| -|++.+++.++.
T Consensus 144 A~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~-- 220 (474)
T PLN02624 144 GVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-GDLDALEKIFEE-- 220 (474)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-CCHHHHHHHHHh--
Confidence 99999875431 0 1 22 577776667654332222211110 0 0110000 01 268889888864
Q ss_pred hcCCCccEEEEecCCCCcccCCCHHH-HHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEE
Q 018147 266 AKGITVRALVVINPGNPTGQVLAEEN-QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVS 344 (360)
Q Consensus 266 ~~g~~~k~iil~~P~NPTG~~~~~~~-l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~ 344 (360)
.+.++.+|++..++|++|.+++.++ +++|.++|++||+++|+||+|.++.+.+. ...+ .. .+ ..+| ++
T Consensus 221 -~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~--~~a~-~~-~~---i~pD--iv- 289 (474)
T PLN02624 221 -DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGK--MLAC-DW-EE---VRPD--VV- 289 (474)
T ss_pred -CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcc--hhhH-Hh-cC---CCCC--EE-
Confidence 2236778888888999999998775 99999999999999999999998655442 1111 00 11 1244 23
Q ss_pred EeccCcCcccc-ccccC
Q 018147 345 FQSVSKGRYFH-FFSKW 360 (360)
Q Consensus 345 ~~S~SK~~~g~-~RvGw 360 (360)
+|||++++| +++||
T Consensus 290 --~lsK~lggG~~piga 304 (474)
T PLN02624 290 --ILGKALGGGVIPVSA 304 (474)
T ss_pred --EecccccCCCCccee
Confidence 368999887 79986
No 245
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.40 E-value=1.9e-11 Score=120.27 Aligned_cols=194 Identities=11% Similarity=0.054 Sum_probs=125.4
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-----C
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-----S 213 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-----~ 213 (360)
--+|.+++++.+.+..... . .... ..+....+++.+.+..+ ..+.+++++++++|+..+++.... +
T Consensus 56 h~~p~v~~ai~~q~~~~~~--~---~~~~-~~~~~~~la~~L~~~~~---~~~~v~f~~sGseA~e~AlklAr~~~~~~g 126 (408)
T PRK04612 56 HNDPDLVAALTEQAGKLWH--T---SNVF-YSAPPLKLAEELVTASR---FAEKVFLCNSGTEANEAAIKLVRKWASSQG 126 (408)
T ss_pred CCCHHHHHHHHHHHHhccc--c---cccc-CCHHHHHHHHHHHhhCC---CCCEEEEcCchHHHHHHHHHHHHHHHHhhC
Confidence 3478899999888876422 1 1111 12334556666655322 126899999999999999886531 1
Q ss_pred --C-CCEEEEcCCCchHHHHHHHH-cCCeEEE---eecCCC---CCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCc
Q 018147 214 --E-NDGILCPIPQYPLYSASIAL-HGGTLVP---YYLDEA---TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT 283 (360)
Q Consensus 214 --~-gd~Vlv~~P~y~~~~~~~~~-~g~~~~~---v~~~~~---~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPT 283 (360)
+ ..+|+.....|.+....... .|..... .++..+ -.| .|++.+++.+.. +..+.+++.|.+++
T Consensus 127 ~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~~~~------~~~aavi~eP~~~~ 199 (408)
T PRK04612 127 RPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-NDVEALEAAMAG------GDVAAVMLEPIQGE 199 (408)
T ss_pred CCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-CCHHHHHHhhCC------CCEEEEEECCccCC
Confidence 1 24688888888765443322 2211100 011110 011 278888887753 45678888998888
Q ss_pred ccCCC--HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccccC
Q 018147 284 GQVLA--EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 284 G~~~~--~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
|.+++ .+.+++|.++|+++|+++|+||+|.++...+. +. .... .+ ....+.+|||++++|+|+||
T Consensus 200 gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~--~~---a~~~------~~-~~pdi~t~~K~l~~G~piga 266 (408)
T PRK04612 200 GGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGT--LF---AHWQ------EQ-VTPDIVTLAKALGGGFPIGA 266 (408)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc--hh---hhhh------cC-CCCCEEEEcchhcCCCceEE
Confidence 88777 56899999999999999999999998766542 21 1111 11 13457899999999999997
No 246
>PLN03032 serine decarboxylase; Provisional
Probab=99.40 E-value=3.9e-11 Score=116.26 Aligned_cols=163 Identities=7% Similarity=-0.068 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCE--EEcCChHHHHHHHHHHHcc-CCCCEEE
Q 018147 143 DSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDI--FLTDGASPAVHMMMQLLIR-SENDGIL 219 (360)
Q Consensus 143 ~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I--~~t~Ga~~al~~~~~~l~~-~~gd~Vl 219 (360)
.+++++.+.+.+........+.......++.+.+.+++.+.+| ++++++ ++|+|+|++...++..... .++..|+
T Consensus 38 ~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg--~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi 115 (374)
T PLN03032 38 GELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE--LEKDEYWGYITTCGTEGNLHGILVGREVFPDGILY 115 (374)
T ss_pred HHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhC--CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEE
Confidence 3666766666543221122222223457778888888887777 456666 9999999999888776531 2456899
Q ss_pred EcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHH
Q 018147 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (360)
Q Consensus 220 v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la 299 (360)
++.-.|.....+++.+|..+..+|++++ ..+|+++|+++|++. ..++.+|+++..+|+||.+-+ +++|+++|
T Consensus 116 ~s~~~H~Sv~kaa~~lg~~~~~V~~d~~--g~id~~~L~~~i~~~---~~~~~lvv~tagtt~tG~idp---i~eI~~i~ 187 (374)
T PLN03032 116 ASRESHYSVFKAARMYRMEAVKVPTLPS--GEIDYDDLERALAKN---RDKPAILNVNIGTTVKGAVDD---LDRILRIL 187 (374)
T ss_pred eCCCceeHHHHHHHHcCCCCeEeeeCCC--CcCcHHHHHHHHHHc---CCCCEEEEEEecCcCCccCCC---HHHHHHHH
Confidence 9999999999999999999999998765 489999999999762 114667788889999999977 88999999
Q ss_pred HHcC-----CEEEEccCCCCC
Q 018147 300 KKEG-----LVLLADEVYQEN 315 (360)
Q Consensus 300 ~~~~-----i~lI~DeaY~~~ 315 (360)
+++| +|+++|.+|+.+
T Consensus 188 ~~~g~~~~~~~lHvDaA~gg~ 208 (374)
T PLN03032 188 KELGYTEDRFYIHCDGALFGL 208 (374)
T ss_pred HHhCCCCCCeeEEEEccchhh
Confidence 9996 599999999774
No 247
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.39 E-value=1.8e-11 Score=121.03 Aligned_cols=202 Identities=15% Similarity=0.117 Sum_probs=125.4
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccC-CCCE
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-ENDG 217 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~-~gd~ 217 (360)
--+|.+++++.+.+..... ..+.. ...+....+|+.+.+.... ...+.+++++++++|+..+++....- ...+
T Consensus 56 h~~p~v~~ai~~ql~~~~~---~~~~~--~~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ 129 (421)
T PRK09792 56 HRHPDLVAAVEQQLQQFTH---TAYQI--VPYESYVTLAEKINALAPV-SGQAKTAFFTTGAEAVENAVKIARAHTGRPG 129 (421)
T ss_pred CCCHHHHHHHHHHHHhccC---cccCc--cCCHHHHHHHHHHHHhCCC-CCCceEEEeCChHHHHHHHHHHHHHhcCCCe
Confidence 3488899999988876421 11211 1223344556655543221 12357899999999999998876421 2357
Q ss_pred EEEcCCCchHHHHHHHHc-CC-------------eEEEeecCCCCCcCC----CHHHHHHHHHHHHhcCCCccEEEEecC
Q 018147 218 ILCPIPQYPLYSASIALH-GG-------------TLVPYYLDEATGWGL----ETSEVKKQLEAAKAKGITVRALVVINP 279 (360)
Q Consensus 218 Vlv~~P~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~~~~----d~~~L~~~i~~~~~~g~~~k~iil~~P 279 (360)
|+.....|.+........ |. .++.+|...+.. ++ +++.+++.++... ...++.+|++.-.
T Consensus 130 ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~-~~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPv 207 (421)
T PRK09792 130 VIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLH-GISTQDSLDAIERLFKSDI-EAKQVAAIIFEPV 207 (421)
T ss_pred EEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccc-cccHHHHHHHHHHHHHhcc-CCCceEEEEEccc
Confidence 888888887654322221 21 122222221110 12 2366666665310 0125666666544
Q ss_pred CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccccc
Q 018147 280 GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFS 358 (360)
Q Consensus 280 ~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~Rv 358 (360)
++|+|..+ +.+.+++|.++|++||+++|+||+|.+|.+.+. ..++..+ + ..|| +.+|||++++|+|+
T Consensus 208 q~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~--~~a~~~~----~-~~pD-----i~t~gK~l~~G~pi 275 (421)
T PRK09792 208 QGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGK--LFAMDHY----A-DKPD-----LMTMAKSLAGGMPL 275 (421)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCc--hhHHHhc----C-CCCc-----EEEeehhhcCCCce
Confidence 89999876 889999999999999999999999999877653 3332222 1 1255 57899999999999
Q ss_pred cC
Q 018147 359 KW 360 (360)
Q Consensus 359 Gw 360 (360)
||
T Consensus 276 ga 277 (421)
T PRK09792 276 SG 277 (421)
T ss_pred EE
Confidence 97
No 248
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.39 E-value=1.3e-11 Score=119.23 Aligned_cols=147 Identities=18% Similarity=0.213 Sum_probs=114.0
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHH----HHHHHcCCeEEEeec
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS----ASIALHGGTLVPYYL 244 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~----~~~~~~g~~~~~v~~ 244 (360)
...|.+.++++- ..++.+.+++++.||..++..|++ +||.|+++...|.+.. ..++..|.++..++.
T Consensus 65 ~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~-~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~ 135 (396)
T COG0626 65 RDALEEALAELE--------GGEDAFAFSSGMAAISTALLALLK-AGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP 135 (396)
T ss_pred HHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcC-CCCEEEecCCccchHHHHHHHHHHhcCeEEEEECC
Confidence 456666666653 357789999999999999999985 9999999998887543 445667888887653
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~ 324 (360)
. +.+++++++.+ +++|+|++-.|.|||-.+.+ +.+|+++|+++|+++|+|+.|..-++...
T Consensus 136 ~-------~~~~~~~~~~~-----~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q~P---- 196 (396)
T COG0626 136 G-------DDEALEAAIKE-----PNTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQRP---- 196 (396)
T ss_pred C-------ChHHHHHHhcc-----cCceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCcccccccCh----
Confidence 2 45566666652 17999999999999998888 99999999999999999999998666542
Q ss_pred CHHHHHHhhCCCCCCceEEEEeccCcCcccc
Q 018147 325 SFKKVSRSMGYGEKDISLVSFQSVSKGRYFH 355 (360)
Q Consensus 325 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~ 355 (360)
-.++ -| |+++|.+|.++|.
T Consensus 197 ------L~~G---aD---IVvhSaTKyl~GH 215 (396)
T COG0626 197 ------LELG---AD---IVVHSATKYLGGH 215 (396)
T ss_pred ------hhcC---CC---EEEEeccccccCC
Confidence 1222 23 8999999998873
No 249
>PRK04311 selenocysteine synthase; Provisional
Probab=99.39 E-value=3.9e-11 Score=119.35 Aligned_cols=190 Identities=15% Similarity=0.141 Sum_probs=129.0
Q ss_pred ccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCC-----cCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHH
Q 018147 132 DRSETQGLFSADSIERAWQILDQIPGRATGAYSHS-----QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMM 206 (360)
Q Consensus 132 ~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~-----~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~ 206 (360)
..|.+...+|+++++++.+.+.... ...|... .-+..+++.+++++ | .++.+++++++.|+..+
T Consensus 90 ~tNlg~s~l~~~v~eav~~~~~~~~---~le~~l~~g~~g~r~~~~e~~lA~l~----G----ae~a~vv~sgtaAl~l~ 158 (464)
T PRK04311 90 HTNLGRALLSEAAIEAVTEAARGYS---NLEYDLATGKRGSRDRALAALLCALT----G----AEDALVVNNNAAAVLLA 158 (464)
T ss_pred eccCCCCCCCHHHHHHHHHHHhccc---ccccchhhcccchHHHHHHHHHHHHh----C----CCeEEEECCHHHHHHHH
Confidence 3444445678999999988876532 1122211 11356677777766 3 34677888888999998
Q ss_pred HHHHccCCCCEEEEcCCCchH------HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCC
Q 018147 207 MQLLIRSENDGILCPIPQYPL------YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (360)
Q Consensus 207 ~~~l~~~~gd~Vlv~~P~y~~------~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~ 280 (360)
+..+ .+||+|+++...+.. +...++..|++++.+..+. ..+++++++++++ ++++|++.+++
T Consensus 159 l~~l--~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~------~TklV~~vh~s 226 (464)
T PRK04311 159 LNAL--AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINE------NTALLLKVHTS 226 (464)
T ss_pred HHHh--CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCc------cCeEEEEEcCC
Confidence 8775 489999999864432 2345677899999987543 3478999999987 79999999999
Q ss_pred CC--cc--cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc----cCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCc
Q 018147 281 NP--TG--QVLAEENQRAIVDFCKKEGLVLLADEVYQENV----YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGR 352 (360)
Q Consensus 281 NP--TG--~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~----~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~ 352 (360)
|| +| ...+ +++|+++|+++|+++|+|.+.+.+. |.-. ..+.+.+.. .++ -| +++.|..|.+
T Consensus 227 N~~i~G~~~~~d---l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~-~~p~~~~~l-~~G---aD---iv~fSg~K~L 295 (464)
T PRK04311 227 NYRIEGFTKEVS---LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLP-DEPTVQELL-AAG---VD---LVTFSGDKLL 295 (464)
T ss_pred CccccccCCcCC---HHHHHHHHHHcCCeEEEECCCcccccchhccCC-CCCchhhHH-hcC---Cc---EEEecCcccc
Confidence 99 34 4455 9999999999999999999644321 1100 011222221 122 23 8889999988
Q ss_pred ccc
Q 018147 353 YFH 355 (360)
Q Consensus 353 ~g~ 355 (360)
+|.
T Consensus 296 gGp 298 (464)
T PRK04311 296 GGP 298 (464)
T ss_pred cCC
Confidence 753
No 250
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.39 E-value=1.1e-11 Score=118.40 Aligned_cols=145 Identities=19% Similarity=0.208 Sum_probs=114.8
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHH----HcCCeEEEeec
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA----LHGGTLVPYYL 244 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~----~~g~~~~~v~~ 244 (360)
...+.+.+++.. | ..+.+++++++.|+..++..|+ ..|+.|+..+..|......++ .+|++...+.+
T Consensus 79 ~~~le~~iaal~----g----a~~~l~fsSGmaA~~~al~~L~-~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~ 149 (409)
T KOG0053|consen 79 RDVLESGIAALE----G----AAHALLFSSGMAAITVALLHLL-PAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV 149 (409)
T ss_pred hHHHHHHHHHHh----C----CceEEEecccHHHHHHHHHHhc-CCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech
Confidence 345555555544 3 4568888889999999999999 599999999999987655444 46777777654
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~ 324 (360)
+ +++++++++++ ++++|++-.|.||+..+.+ +++|.++|+++|++||+|+.+...++.+.
T Consensus 150 ~-------~~~~~~~~i~~------~t~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~~p---- 209 (409)
T KOG0053|consen 150 D-------DLKKILKAIKE------NTKAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQDP---- 209 (409)
T ss_pred h-------hHHHHHHhhcc------CceEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCcccccCh----
Confidence 4 57888888887 7999999999999999988 99999999999999999999998654432
Q ss_pred CHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 325 SFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 325 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
-.++ -| |+++|.+|.++|
T Consensus 210 ------L~lG---AD---IV~hSaTKyi~G 227 (409)
T KOG0053|consen 210 ------LPLG---AD---IVVHSATKYIGG 227 (409)
T ss_pred ------hhcC---CC---EEEEeeeeeecC
Confidence 1122 24 899999999887
No 251
>PLN00144 acetylornithine transaminase
Probab=99.38 E-value=8.1e-12 Score=121.96 Aligned_cols=193 Identities=10% Similarity=0.014 Sum_probs=121.5
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc--C----
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR--S---- 213 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~--~---- 213 (360)
-+|++++++.+.+..... ...+ ...+....+|+.+.+.. ..+.+++++++++|+..+++.... .
T Consensus 32 ~~p~v~~ai~~q~~~~~~--~~~~----~~~~~~~~la~~l~~~~----~~~~v~f~~sGseA~e~AlklAr~~~~~~~~ 101 (382)
T PLN00144 32 GDPDWVKAVAEQAGTLAH--VSNV----YHTIPQVELAKRLVASS----FADRVFFCNSGTEANEAAIKFARKYQRVRAP 101 (382)
T ss_pred CCHHHHHHHHHHHHhcCC--cccc----ccCHHHHHHHHHHHhcC----CCCeEEEeCCcHHHHHHHHHHHHHHHhccCC
Confidence 378899999998886432 1111 11234455666665432 246899999999999999886531 0
Q ss_pred --C------CCEEEEcCCCchHHHHHHHHcCCeE-E---EeecCCCCCc--CCCHHHHHHHHHHHHhcCCCccEEEEecC
Q 018147 214 --E------NDGILCPIPQYPLYSASIALHGGTL-V---PYYLDEATGW--GLETSEVKKQLEAAKAKGITVRALVVINP 279 (360)
Q Consensus 214 --~------gd~Vlv~~P~y~~~~~~~~~~g~~~-~---~v~~~~~~~~--~~d~~~L~~~i~~~~~~g~~~k~iil~~P 279 (360)
+ ..+|+...-.|.+............ . ..+...+..+ -.|++.|++.+.. .++++|++.--
T Consensus 102 ~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~aavi~eP~ 176 (382)
T PLN00144 102 DKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQK-----GKTAAVFVEPV 176 (382)
T ss_pred CCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCC-----CCeEEEEEccc
Confidence 0 2468888888887654433322211 0 0111110000 1268888887743 15666665533
Q ss_pred CCCcccCCCHHH--HHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcccccc
Q 018147 280 GNPTGQVLAEEN--QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFF 357 (360)
Q Consensus 280 ~NPTG~~~~~~~--l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~R 357 (360)
+|| |.+++.+. +++|.++|++||+++|+||+|.+|...+. ..+. .. .+ ..|| +.+|||++++|+|
T Consensus 177 q~~-gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~--~~~~-~~-~~---~~PD-----i~t~sK~l~~G~p 243 (382)
T PLN00144 177 QGE-GGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGY--LWAH-EA-YG---VEPD-----IMTLAKPLAGGLP 243 (382)
T ss_pred cCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch--Hhhh-hh-cC---CCCC-----EEEecccccCCcc
Confidence 889 55555444 99999999999999999999999766553 2111 01 11 1256 7889999999999
Q ss_pred ccC
Q 018147 358 SKW 360 (360)
Q Consensus 358 vGw 360 (360)
+||
T Consensus 244 ig~ 246 (382)
T PLN00144 244 IGA 246 (382)
T ss_pred eEE
Confidence 997
No 252
>PRK02769 histidine decarboxylase; Provisional
Probab=99.38 E-value=4.5e-11 Score=116.36 Aligned_cols=139 Identities=10% Similarity=-0.016 Sum_probs=112.3
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCE--EEcCChHHHHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHcCCeEEEeecC
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDI--FLTDGASPAVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLVPYYLD 245 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I--~~t~Ga~~al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~ 245 (360)
..++.+.+.+++.+.+|. +++++ ++|+|+|++...++..... .+++.|+++.-.|+.....++.+|.+.+.++.+
T Consensus 63 ~~~~e~~~~~~~a~l~g~--~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~ 140 (380)
T PRK02769 63 SFDFERDVMNFFAELFKI--PFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSL 140 (380)
T ss_pred hHHHHHHHHHHHHHHhCC--CCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccC
Confidence 466777777777777664 34444 8899999997666544321 378899999999999999999999998888887
Q ss_pred CCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcC---CEEEEccCCCCCcc
Q 018147 246 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG---LVLLADEVYQENVY 317 (360)
Q Consensus 246 ~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~---i~lI~DeaY~~~~~ 317 (360)
++ ..+|+++|++++++. +.++.+|+++.++|+||.+-+ +++|+++|+++| +++++|.+|+.+..
T Consensus 141 ~~--g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~ 207 (380)
T PRK02769 141 PN--GEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMIL 207 (380)
T ss_pred CC--CcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceee
Confidence 53 479999999999873 335889999999999999988 899999999998 69999999988544
No 253
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.37 E-value=3.7e-11 Score=117.42 Aligned_cols=175 Identities=19% Similarity=0.195 Sum_probs=129.6
Q ss_pred CCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchH-HHHHHHHcCCeEE
Q 018147 162 AYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL-YSASIALHGGTLV 240 (360)
Q Consensus 162 ~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~-~~~~~~~~g~~~~ 240 (360)
.|..+....+|.+++++++ ..+.++.|++++.|+++++...+ +|||.| +.++|.. +...++..|+.++
T Consensus 66 ~yag~~s~~~lE~~va~~~--------G~~~av~v~sGT~Al~ll~~l~l-~pGDeV--psn~~f~Tt~ahIe~~Gav~v 134 (450)
T TIGR02618 66 AYAGSRNFYHLERTVRELY--------GFKYVVPTHQGRGAENLLSQIAI-KPGDYV--PGNMYFTTTRYHQEKNGATFV 134 (450)
T ss_pred hhcCCCcHHHHHHHHHHHH--------CCCeEEEcCCHHHHHHHHHHhCC-CCcCEE--CCceeHHHHHHHHHhCCeEEE
Confidence 5888878899999999998 34679999999999998876667 499977 7778754 4444788898777
Q ss_pred EeecCC--------CCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCC-cccCCCHHHHHHHHHHHHHcCCEEEEccC
Q 018147 241 PYYLDE--------ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP-TGQVLAEENQRAIVDFCKKEGLVLLADEV 311 (360)
Q Consensus 241 ~v~~~~--------~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NP-TG~~~~~~~l~~i~~la~~~~i~lI~Dea 311 (360)
.++.++ ..++.+|+++|+++|++.. ..++++|.+.+++|- .|.+++.+++++|.++|++||+.||+|.+
T Consensus 135 Di~~dea~~~~~~~p~~GniD~~~Le~aI~~~~--~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaA 212 (450)
T TIGR02618 135 DIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVG--ADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDAT 212 (450)
T ss_pred eeecccccccccCCCCCCCcCHHHHHHHhcccc--CcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 665442 3356889999999997521 124567888899885 58999999999999999999999999998
Q ss_pred CCC-Ccc-----CCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc
Q 018147 312 YQE-NVY-----VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY 353 (360)
Q Consensus 312 Y~~-~~~-----~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 353 (360)
... ..+ ++.-...++..+..+|.. +-| .++.|..|.+.
T Consensus 213 R~~gNA~~I~~re~g~~~~~i~ei~~e~~~-~aD---~~~~S~~Kd~~ 256 (450)
T TIGR02618 213 RCVENAYFIKEREQGYEDKSIAEILKEMMS-YAD---GCTMSGKKDCL 256 (450)
T ss_pred chhhChhhhhcccccccCCCHHHHHHHHhc-cCc---EEEEeeccCCC
Confidence 755 212 111124466666666543 345 46778888543
No 254
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.37 E-value=1.2e-11 Score=122.62 Aligned_cols=201 Identities=14% Similarity=0.066 Sum_probs=131.0
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
+..++|+..+ -..-++.+++++.+.+++. ...|....+..+|.+.+++.+ . ..+.+++++++++
T Consensus 49 G~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~----~~~~~~~~~~~~la~~L~~~~----~---~~~~v~~~~sGse 117 (426)
T PRK00062 49 GNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKG----LSFGAPTELEVELAELVIELV----P---SIEMVRMVNSGTE 117 (426)
T ss_pred CCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhC----CcCCCCCHHHHHHHHHHHHhC----C---CCCEEEEecCHHH
Confidence 4455665544 1245888999999988773 223444444555555555543 1 3568999999999
Q ss_pred HHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHc-CCe------------EE-----EeecCCCCCcCCCHHHHHHHHH
Q 018147 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIALH-GGT------------LV-----PYYLDEATGWGLETSEVKKQLE 262 (360)
Q Consensus 202 al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~-g~~------------~~-----~v~~~~~~~~~~d~~~L~~~i~ 262 (360)
|+..+++.... ..++.|+..++.|.++...+... |.. .. .+... ..|++.+++.++
T Consensus 118 A~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~ 192 (426)
T PRK00062 118 ATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP-----YNDLEAVEELFE 192 (426)
T ss_pred HHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcC-----CCCHHHHHHHHH
Confidence 99999997542 13688999999999876433322 100 00 01111 137888988886
Q ss_pred HHHhcCCCccEEEEe-cCCCCcccCCC-HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCc
Q 018147 263 AAKAKGITVRALVVI-NPGNPTGQVLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDI 340 (360)
Q Consensus 263 ~~~~~g~~~k~iil~-~P~NPTG~~~~-~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 340 (360)
.. ..++.+|++. -++| +|.+.+ .+.+++|.++|++||+++|+||+|.++.+++ .... ... + ..||
T Consensus 193 ~~---~~~~aaiivEpv~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~---~~~~-~~~-~---~~pD- 259 (426)
T PRK00062 193 EY---GDEIAAVIVEPVAGN-MGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL---GGAQ-GYY-G---VTPD- 259 (426)
T ss_pred hC---CCcEEEEEEeCCcCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC---ccHH-HHh-C---CCcc-
Confidence 42 1256566665 3355 787776 7789999999999999999999999874432 1111 111 1 1245
Q ss_pred eEEEEeccCcCccccccccC
Q 018147 341 SLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 341 ~~i~~~S~SK~~~g~~RvGw 360 (360)
+.+|||++++|+++||
T Consensus 260 ----i~~~gK~l~~G~p~ga 275 (426)
T PRK00062 260 ----LTTLGKIIGGGLPVGA 275 (426)
T ss_pred ----hHhhhhHhhCCCccee
Confidence 4689999999999986
No 255
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.37 E-value=3.3e-11 Score=119.76 Aligned_cols=213 Identities=15% Similarity=0.131 Sum_probs=127.7
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
...+||+..+ -.--+|.+.+++.+.+..... +.......+.+.++|+.+.+..+ ..-+.+++++++++
T Consensus 40 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~-----~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGsE 112 (443)
T PRK08360 40 GNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIH-----YTPIYGFPVEPLLLAEKLIEIAP--GDNPKVSFGLSGSD 112 (443)
T ss_pred CCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccC-----ccccccCcHHHHHHHHHHHHhCC--CCCCEEEEcCCHHH
Confidence 4455666444 224488899999988876432 11111123445566666655432 12258999999999
Q ss_pred HHHHHHHHHcc-CCCCEEEEcCCCchHHHH-HHHHcCC------------eEEEeecCCC--CCcC--------CCHHHH
Q 018147 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSA-SIALHGG------------TLVPYYLDEA--TGWG--------LETSEV 257 (360)
Q Consensus 202 al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~-~~~~~g~------------~~~~v~~~~~--~~~~--------~d~~~L 257 (360)
|+..+++.... .....|+...-.|.+... .+...|. .+..++.... ..|. -+++.+
T Consensus 113 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (443)
T PRK08360 113 ANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYI 192 (443)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHH
Confidence 99999887532 134567777777765432 2222221 1222222110 0011 123445
Q ss_pred HHHHHHHHhcCCCccEEEEecC-CCCcccCCC-HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCC
Q 018147 258 KKQLEAAKAKGITVRALVVINP-GNPTGQVLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (360)
Q Consensus 258 ~~~i~~~~~~g~~~k~iil~~P-~NPTG~~~~-~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~ 335 (360)
++.++... .+.++++|++. | +||+|.+++ .+.+++|.++|++||+++|+||+|.++.+.+. +.+.... ++
T Consensus 193 ~~~l~~~~-~~~~iAAvi~e-P~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~--~~a~~~~--~~-- 264 (443)
T PRK08360 193 KEKFEGEV-YAEGVAALFAE-PIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGK--WFAIEHF--GV-- 264 (443)
T ss_pred HHHHHhcc-CCCCeEEEEEC-CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc--chhhhhc--CC--
Confidence 55553210 12367666665 6 799999887 55799999999999999999999999766553 2222111 11
Q ss_pred CCCCceEEEEeccCcCccccccccC
Q 018147 336 GEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 336 ~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
.|| ++ +|||++++|+|+||
T Consensus 265 -~pD--ii---tlsK~l~~G~piga 283 (443)
T PRK08360 265 -EPD--II---TLGKPLGGGLPISA 283 (443)
T ss_pred -CCC--EE---EecccccCCceeEE
Confidence 255 23 67999999999997
No 256
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.36 E-value=2.9e-11 Score=118.80 Aligned_cols=203 Identities=14% Similarity=0.144 Sum_probs=127.4
Q ss_pred CCCCccccCcc--CCC---CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 018147 126 DHPSILDRSET--QGL---FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (360)
Q Consensus 126 ~~p~~l~~~~~--~~~---~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~ 200 (360)
++.+++|+..+ ... -+|.+++++.+.++.... ....+ . ......+++.+.+..| .+.++++++++
T Consensus 35 ~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~-~~~~~-~----~~~~~~l~~~l~~~~~----~~~~~~~~SGs 104 (401)
T TIGR01885 35 EGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTL-SSRAF-Y----NDVFGEFAEYVTKLFG----YDKVLPMNTGA 104 (401)
T ss_pred CCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccc-ccccc-C----CHHHHHHHHHHHhhcC----CCEEEEeCccH
Confidence 34556777666 122 389999999888876432 11111 1 2233444444444434 36899999999
Q ss_pred HHHHHHHHHHcc--------CC-CCEEEEcCCCchHH-HHHHHHcCC------------eEEEeecCCCCCcCCCHHHHH
Q 018147 201 PAVHMMMQLLIR--------SE-NDGILCPIPQYPLY-SASIALHGG------------TLVPYYLDEATGWGLETSEVK 258 (360)
Q Consensus 201 ~al~~~~~~l~~--------~~-gd~Vlv~~P~y~~~-~~~~~~~g~------------~~~~v~~~~~~~~~~d~~~L~ 258 (360)
+|+..+++.+.. .+ .+.|+...-.|... ...+...+. .+..++ ..|+++|+
T Consensus 105 ~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le 177 (401)
T TIGR01885 105 EAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIP-------YNNLEALE 177 (401)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeC-------CCCHHHHH
Confidence 999999987521 12 35677777777642 333333221 122221 12689999
Q ss_pred HHHHHHHhcCCCccEEEEecCCCCcccCCCHH-HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCC
Q 018147 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEE-NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (360)
Q Consensus 259 ~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~-~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~ 337 (360)
+.+++. +.++.+|++..+++++|.+.+.+ .+++|.++|++||+++|+||+|.++.+.+. ..++ .. .++ .
T Consensus 178 ~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~--~~~~-~~-~~~---~ 247 (401)
T TIGR01885 178 EALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGK--LLCV-DH-ENV---K 247 (401)
T ss_pred HHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch--hhHH-hh-cCC---C
Confidence 888642 23566777667799999999654 699999999999999999999988655543 2121 11 111 1
Q ss_pred CCceEEEEeccCcCcccc-ccccC
Q 018147 338 KDISLVSFQSVSKGRYFH-FFSKW 360 (360)
Q Consensus 338 ~~~~~i~~~S~SK~~~g~-~RvGw 360 (360)
+| ++ ++||++++| +|+||
T Consensus 248 ~d--i~---~~gK~l~~g~~~ig~ 266 (401)
T TIGR01885 248 PD--IV---LLGKALSGGVYPVSA 266 (401)
T ss_pred CC--EE---EeeccccCCCCCcEE
Confidence 44 23 468999876 78886
No 257
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.34 E-value=1.1e-10 Score=115.94 Aligned_cols=189 Identities=13% Similarity=0.140 Sum_probs=127.2
Q ss_pred ccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCC-----CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHH
Q 018147 132 DRSETQGLFSADSIERAWQILDQIPGRATGAYSH-----SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMM 206 (360)
Q Consensus 132 ~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~-----~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~ 206 (360)
..|.+...+|+++++++.+.+..... ..|.- ..-+..+++.+++++ | .+..+++++++.|+..+
T Consensus 85 ~tNlg~s~l~~~vieAv~~~~~~y~~---l~~~l~~g~~g~r~~~le~~lA~l~----g----ae~alvv~sg~aAi~l~ 153 (454)
T TIGR00474 85 HTNLGRAPLAEEAIEAVTDAARGYSN---LEYDLETGKRGSRYSHVEGLLCELT----G----AEDALVVNNNAAAVLLA 153 (454)
T ss_pred eccCCCCCCCHHHHHHHHHHHhcccc---hhccccccccchHHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHH
Confidence 33444446789999999888875421 12221 111467777777776 3 23456677788899888
Q ss_pred HHHHccCCCCEEEEcCCCchH------HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCC
Q 018147 207 MQLLIRSENDGILCPIPQYPL------YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (360)
Q Consensus 207 ~~~l~~~~gd~Vlv~~P~y~~------~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~ 280 (360)
+..+ .+||+|+++...|.. +...++..|++++.++.+. ..+++++++++++ ++++|++.+++
T Consensus 154 l~~l--~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~------~T~lv~~~h~s 221 (454)
T TIGR00474 154 LNTL--AKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITE------NTALLLKVHTS 221 (454)
T ss_pred HHHh--CCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCc------CCEEEEEEccC
Confidence 8665 489999999876532 2345677899999887542 3478999999977 79999999999
Q ss_pred CCc--c--cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc----cCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCc
Q 018147 281 NPT--G--QVLAEENQRAIVDFCKKEGLVLLADEVYQENV----YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGR 352 (360)
Q Consensus 281 NPT--G--~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~----~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~ 352 (360)
|++ | .+.+ +++|+++|+++|+++++|...+-+. |+-. ..+.+.... .++ -| +++.|..|.+
T Consensus 222 N~~~~G~~~~~d---l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~-~~p~~~~~~-~~G---aD---iv~fSg~K~L 290 (454)
T TIGR00474 222 NYRIVGFTEEVS---IAELVALGREHGLPVMEDLGSGSLVDLSRYGLP-DEPTVQEVI-AAG---VD---LVTFSGDKLL 290 (454)
T ss_pred cccccCCCCCCC---HHHHHHHHHHcCCeEEEECCCcccccchhccCC-CCcccccHh-HcC---CC---EEEecCcccc
Confidence 995 5 3556 9999999999999999998644321 1000 011111111 122 23 8889999988
Q ss_pred cc
Q 018147 353 YF 354 (360)
Q Consensus 353 ~g 354 (360)
+|
T Consensus 291 gG 292 (454)
T TIGR00474 291 GG 292 (454)
T ss_pred CC
Confidence 65
No 258
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.33 E-value=7.4e-11 Score=116.53 Aligned_cols=163 Identities=10% Similarity=0.028 Sum_probs=125.2
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEE--cCChHHHHHHHHHHHcc----
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL--TDGASPAVHMMMQLLIR---- 212 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~--t~Ga~~al~~~~~~l~~---- 212 (360)
...+.+.+.+...+..... .... .....++.+.+.+++.+.+|.+-..+++.. |+|+|++...++.+...
T Consensus 52 ~~~p~~~~~~~~~l~~~~~-np~s---~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~ 127 (431)
T TIGR01788 52 WMEPEARKLMDETINKNMI-DKDE---YPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRK 127 (431)
T ss_pred CCCHHHHHHHHHHHhcCCC-Cccc---CccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHH
Confidence 3456677777777765422 1212 223457888888888888775311145544 89999999988765431
Q ss_pred ---CC-----CCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcc
Q 018147 213 ---SE-----NDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (360)
Q Consensus 213 ---~~-----gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG 284 (360)
.. +-.|+++.-.|+++...++..|.++..+|++++ ++.+|+++|+++|++ ++.+|+++..+|.||
T Consensus 128 ~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~-~~~vd~~~L~~~i~~------~t~lV~~t~g~t~tG 200 (431)
T TIGR01788 128 RMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPG-RYVIDPEQVVEAVDE------NTIGVVCILGTTYTG 200 (431)
T ss_pred HHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCC-ceeeCHHHHHHHHhh------CCeEEEEEeCCCCCc
Confidence 01 236999999999999999999999999999863 457999999999987 788899999999999
Q ss_pred cCCCHHHHHHHHHHHHHc------CCEEEEccCCCCC
Q 018147 285 QVLAEENQRAIVDFCKKE------GLVLLADEVYQEN 315 (360)
Q Consensus 285 ~~~~~~~l~~i~~la~~~------~i~lI~DeaY~~~ 315 (360)
.+-| +++|+++|+++ |+|+++|.+|+.+
T Consensus 201 ~idp---i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~ 234 (431)
T TIGR01788 201 EYED---VKALNDALDEYNAKTGWDIPIHVDAASGGF 234 (431)
T ss_pred ccCC---HHHHHHHHHHHHhhhCCCceEEEecccHHH
Confidence 9999 89999999999 9999999999964
No 259
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.33 E-value=2.7e-11 Score=117.93 Aligned_cols=142 Identities=15% Similarity=0.209 Sum_probs=104.0
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCch----HHHHHHHHcCCeEEEeec
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP----LYSASIALHGGTLVPYYL 244 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~----~~~~~~~~~g~~~~~v~~ 244 (360)
..+|.+.++++. | .+..+++++++.||.+++.++++ +||+|+++.+.|. .+...+...|++++.+++
T Consensus 66 ~~~lE~~la~le----g----~~~av~~sSG~aAi~~al~all~-~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~ 136 (384)
T PRK06434 66 VQAFEEKYAVLE----N----AEHALSFSSGMGAITSAILSLIK-KGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDT 136 (384)
T ss_pred HHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHHhC-CCCEEEEecCccchHHHHHHHHHHhcCcEEEEECC
Confidence 566666676665 3 35678888888999999999884 9999999887554 444667778999999988
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~ 324 (360)
++.+.+.++. + ++++|++.+|.|||+.+.+ +++|+++|++++ +++|.++..-. ...
T Consensus 137 ~~~~~~~l~~--------~------~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~~-~~~---- 192 (384)
T PRK06434 137 DRLNSLDFDP--------S------NYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASPY-NQN---- 192 (384)
T ss_pred CChhheeecC--------C------CeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCcc-cCC----
Confidence 7543343321 1 6899999999999999876 999999999998 45699975422 111
Q ss_pred CHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 325 SFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 325 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
++ +.+ .| ++++|.+|.++|
T Consensus 193 pl-----~~g---aD---ivv~S~tK~i~G 211 (384)
T PRK06434 193 PL-----DLG---AD---VVIHSATKYISG 211 (384)
T ss_pred ch-----hcC---CC---EEEeecccccCC
Confidence 11 111 23 888999998875
No 260
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.32 E-value=1.7e-10 Score=103.66 Aligned_cols=161 Identities=17% Similarity=0.167 Sum_probs=131.6
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCC
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT 248 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~ 248 (360)
+..+.+.+++|+ ..|.+-+|+|+.++-+.++.+++. +||.|++....+....-+++.+|+++..+|-....
T Consensus 63 I~~F~~dlaeFl--------g~D~~R~t~GARe~KfavMhal~~-~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~P 133 (382)
T COG1103 63 IKDFLEDLAEFL--------GMDEVRVTAGAREAKFAVMHALCK-EGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYP 133 (382)
T ss_pred HHHHHHHHHHHh--------CCceeeecccchhhHHHHHHHhcc-CCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCC
Confidence 567888899887 367899999999999999999995 99999999988877667889999999999988777
Q ss_pred CcCCCHHHHHHHHHHHHhcC-CCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHH
Q 018147 249 GWGLETSEVKKQLEAAKAKG-ITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFK 327 (360)
Q Consensus 249 ~~~~d~~~L~~~i~~~~~~g-~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~ 327 (360)
.|.++++...+.|++-.+++ ..+.+.++++|..--|...+ .++++++|+++|+.++...+|.--. .+.|.+
T Consensus 134 ey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D---akkva~ic~e~gvPlllN~AYt~Gr-----mpvs~k 205 (382)
T COG1103 134 EYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD---AKKVAKICREYGVPLLLNCAYTVGR-----MPVSGK 205 (382)
T ss_pred ceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh---hHHHHHHHHHcCCceEeecceeecc-----cccccc
Confidence 89999999999999877765 56778888898766666554 8999999999999999999997622 334433
Q ss_pred HHHHhhCCCCCCceEEEEeccCcCccccc
Q 018147 328 KVSRSMGYGEKDISLVSFQSVSKGRYFHF 356 (360)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~S~SK~~~g~~ 356 (360)
.. + .| ++++|--|+++..-
T Consensus 206 e~----g---~D---FiVgSGHKsmAAs~ 224 (382)
T COG1103 206 EI----G---AD---FIVGSGHKSMAASA 224 (382)
T ss_pred cc----C---CC---EEEecCccchhccC
Confidence 22 1 24 67899999876543
No 261
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.31 E-value=5e-12 Score=107.17 Aligned_cols=65 Identities=26% Similarity=0.461 Sum_probs=60.5
Q ss_pred CCCCCcCcHHHHHHHHHHHHhhcC--CCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchH
Q 018147 162 AYSHSQGIKGLRDTIAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL 227 (360)
Q Consensus 162 ~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~ 227 (360)
.|++..|.++||+++|+|+.+++| +.+++++|++|+|+++++..++..++ ++||.|++++|+|+.
T Consensus 87 ~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~-dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 87 LFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIA-DPGDAFLVPTPYYAA 153 (153)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHc-CCCCEEEEeCCCCCC
Confidence 388899999999999999999988 67889999999999999999999999 599999999999963
No 262
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.30 E-value=1.1e-10 Score=116.53 Aligned_cols=215 Identities=14% Similarity=0.116 Sum_probs=125.0
Q ss_pred CCCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 018147 126 DHPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (360)
Q Consensus 126 ~~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~ 200 (360)
+...+||+..+ -.--+|.+.+++.+.+..........+ ..+.+..+|+.+.+..... ..+.++++++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~-----~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGs 125 (451)
T PRK06918 52 DGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNVM-----MYEPYIELAEKLAALAPGS-FDKKVLFLNSGA 125 (451)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCcccccc-----ccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcH
Confidence 34456666554 223478899999988876431001111 1234555666665543211 115899999999
Q ss_pred HHHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHc-CC-------------eEEEeecCC--CCCcCCC--------HH
Q 018147 201 PAVHMMMQLLIR-SENDGILCPIPQYPLYSASIALH-GG-------------TLVPYYLDE--ATGWGLE--------TS 255 (360)
Q Consensus 201 ~al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~-g~-------------~~~~v~~~~--~~~~~~d--------~~ 255 (360)
+|+..+++.... .....|+.....|.+........ +. .+..+|... ....++. .+
T Consensus 126 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (451)
T PRK06918 126 EAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIE 205 (451)
T ss_pred HHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHH
Confidence 999999886532 13456888888887665433322 21 011222110 0001111 12
Q ss_pred HHHHHHHHHHhcCCCccEEEEecCCCCc-ccCCC-HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhh
Q 018147 256 EVKKQLEAAKAKGITVRALVVINPGNPT-GQVLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSM 333 (360)
Q Consensus 256 ~L~~~i~~~~~~g~~~k~iil~~P~NPT-G~~~~-~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~ 333 (360)
.+++.+... ...+..+.+|..|-+.. |.+++ .+.+++|.++|++||+++|+||+|.+|.+.+. +.++..+
T Consensus 206 ~~~~~~~~~--~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~--~~a~~~~---- 277 (451)
T PRK06918 206 EFKNFFISE--VAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGK--YFAIEHF---- 277 (451)
T ss_pred HHHHHHHhh--cCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCc--eehhHhc----
Confidence 233333211 11123466667785554 55454 55599999999999999999999999877653 3333322
Q ss_pred CCCCCCceEEEEeccCcCccccccccC
Q 018147 334 GYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 334 ~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
. ..|| +.||||++++|+|+||
T Consensus 278 ~-v~pD-----i~t~sK~l~~G~pig~ 298 (451)
T PRK06918 278 D-VVPD-----LITVSKSLGAGVPISG 298 (451)
T ss_pred C-CCCC-----EEeeehhhcCCCccEE
Confidence 1 1255 4489999999999998
No 263
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.29 E-value=2.4e-11 Score=118.19 Aligned_cols=174 Identities=20% Similarity=0.328 Sum_probs=117.1
Q ss_pred CCCCCCCcC-cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCe
Q 018147 160 TGAYSHSQG-IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGT 238 (360)
Q Consensus 160 ~~~Y~~~~G-~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~ 238 (360)
......+.| +.+..+.+|+.+ | ..+..++++|+|.++..++.+++. +||.|+++..+|-.....+...|++
T Consensus 58 lD~L~~p~G~I~eAe~~aA~~f----G---Ad~t~flvnGsT~g~~a~i~a~~~-~gd~VLv~RN~HkSv~~alil~ga~ 129 (417)
T PF01276_consen 58 LDDLHDPEGIIKEAEELAARAF----G---ADKTFFLVNGSTSGNQAMIMALCR-PGDKVLVDRNCHKSVYNALILSGAI 129 (417)
T ss_dssp CBBTTTTBTHHHHHHHHHHHHH----T---ESEEEEESSHHHHHHHHHHHHHTT-TTCEEEEETT--HHHHHHHHHHTEE
T ss_pred cCcccCCccHHHHHHHHHHHhc----C---CCeEEEEecCchHHHHHHHHHhcC-CCCEEEEcCCcHHHHHHHHHHcCCe
Confidence 333334444 344455555554 4 234578899999999999999995 9999999999999999999999999
Q ss_pred EEEeecCCCCCcC----CCH-----HHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEc
Q 018147 239 LVPYYLDEATGWG----LET-----SEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (360)
Q Consensus 239 ~~~v~~~~~~~~~----~d~-----~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~D 309 (360)
+++++.. .+.++ +++ +.+++++++.... +.+++++|++|+. -|.+.+ +++|+++|+++++.|++|
T Consensus 130 Pvyi~p~-~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~-k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvD 203 (417)
T PF01276_consen 130 PVYIPPE-DNEYGIIGGISPDEFNEEDIEEALKEHPDA-KAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVD 203 (417)
T ss_dssp EEEEEEE-E-TTS-BEEB-GGGGSHHHHHHHHHHCTTC-HCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE
T ss_pred EEEecCC-ccccCCccCCChhhhhHHHHHHHHHhCccc-cCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEE
Confidence 9998765 33343 455 8888888763110 0144599999987 599988 999999999999999999
Q ss_pred cCCCCCc-cCCCCCCCCHHHHHHhhCC-CCCCceEEEEeccCcCcc
Q 018147 310 EVYQENV-YVPEKKFHSFKKVSRSMGY-GEKDISLVSFQSVSKGRY 353 (360)
Q Consensus 310 eaY~~~~-~~~~~~~~s~~~~~~~~~~-~~~~~~~i~~~S~SK~~~ 353 (360)
|||+... |. ++..-.-.++. ...+..+++++|.-|.++
T Consensus 204 EAhGah~~F~------~lp~~a~~~gad~~~~~~~~vvqS~HKtL~ 243 (417)
T PF01276_consen 204 EAHGAHFGFH------PLPRSALALGADRPNDPGIIVVQSTHKTLP 243 (417)
T ss_dssp -TT-TTGGCS------GGGTTCSSTTSS-CTSBEEEEEEEHHHHSS
T ss_pred ccccccccCC------CCccchhhccCccccccceeeeechhhccc
Confidence 9998732 22 11111111211 123446799999999765
No 264
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.29 E-value=1.4e-10 Score=114.77 Aligned_cols=201 Identities=13% Similarity=0.108 Sum_probs=117.4
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-CCCCEE
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDGI 218 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-~~gd~V 218 (360)
-+|++++++.+.+.+... ..+... ..+.+..+|+.+.+... ....+.+++++++++|+..+++.... ....+|
T Consensus 50 ~~p~v~~a~~~ql~~~~~---~~~~~~--~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~i 123 (420)
T TIGR00700 50 SHPRVVDAVRTQVAEFTH---TCFMVT--PYEGYVALAEKLNRIAP-GSGPKKSVFFNSGAEAVENAVKIARSYTGRPGV 123 (420)
T ss_pred CCHHHHHHHHHHHHhccC---cccccc--CChHHHHHHHHHHHhCC-CCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcE
Confidence 378899999988876431 112111 12233445555544321 11235799999999999998886532 133568
Q ss_pred EEcCCCchHHHHHHHHc-CC-------------eEEEeecCC--CC-------CcCCCHHHHHHHHHHHHhcCCCccEEE
Q 018147 219 LCPIPQYPLYSASIALH-GG-------------TLVPYYLDE--AT-------GWGLETSEVKKQLEAAKAKGITVRALV 275 (360)
Q Consensus 219 lv~~P~y~~~~~~~~~~-g~-------------~~~~v~~~~--~~-------~~~~d~~~L~~~i~~~~~~g~~~k~ii 275 (360)
+...-.|.+........ +. .+..++... .. .+.-+++.+++.+... ....++.+|+
T Consensus 124 i~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iAavi 202 (420)
T TIGR00700 124 VAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVID-VGANNVAALV 202 (420)
T ss_pred EEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhh-cCCCcEEEEE
Confidence 88888887654332222 11 111122110 00 0001244555555311 1122454554
Q ss_pred EecC-CCCcccCCCHH-HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc
Q 018147 276 VINP-GNPTGQVLAEE-NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY 353 (360)
Q Consensus 276 l~~P-~NPTG~~~~~~-~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 353 (360)
..| +.-+|.+++.+ .+++|.++|++||+++|+||+|.+|.+.+. +.++... +..+| +-+|||+++
T Consensus 203 -~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~--~~a~~~~-----~~~pD-----i~~lsK~l~ 269 (420)
T TIGR00700 203 -IEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGA--MFACEHE-----GPEPD-----LITTAKSLA 269 (420)
T ss_pred -ECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccch--hHHHhhc-----CCCCC-----EEEeecccc
Confidence 455 55678876555 499999999999999999999999877653 2222211 11255 345999999
Q ss_pred ccccccC
Q 018147 354 FHFFSKW 360 (360)
Q Consensus 354 g~~RvGw 360 (360)
+|+|+||
T Consensus 270 ~G~pig~ 276 (420)
T TIGR00700 270 DGLPLSG 276 (420)
T ss_pred CCcceEE
Confidence 9999998
No 265
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.29 E-value=3.8e-11 Score=112.58 Aligned_cols=156 Identities=19% Similarity=0.278 Sum_probs=117.7
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEE
Q 018147 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (360)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv 220 (360)
.+++++++.+... +...|+...-..++.+.+++.+ | .+..+++.+++.+-.++++.++. |++.|++
T Consensus 8 ~~~m~~a~~~a~~-----gd~~Yg~D~~~~~l~~~i~~l~----g----~e~a~f~~sGT~An~~al~~~~~-~~~~vi~ 73 (290)
T PF01212_consen 8 TPAMLEAMAAANV-----GDDAYGEDPTTARLEERIAELF----G----KEAALFVPSGTMANQLALRAHLR-PGESVIC 73 (290)
T ss_dssp -HHEEHHHHHTTS-----B-CCTTSSHHHHHHHHHHHHHH----T----SSEEEEESSHHHHHHHHHHHHHH-TTEEEEE
T ss_pred CHHHHHHHHcccc-----CCcccCCChhHHHHHHHHHHHc----C----CCEEEEeCCCChHHHHHHHHHHh-cCCceec
Confidence 5556666633221 2336888887888888888887 3 45667888999999999999995 9999999
Q ss_pred cCCCchHHH---HHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCc-ccCCCHHHHHHHH
Q 018147 221 PIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT-GQVLAEENQRAIV 296 (360)
Q Consensus 221 ~~P~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPT-G~~~~~~~l~~i~ 296 (360)
..+.|.... ......|.+++.++..+.+ .+++++|++.+........++++|+|.+|+|-. |.+++.+++++|.
T Consensus 74 ~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G--~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~ 151 (290)
T PF01212_consen 74 ADTAHIHFDETGAIEELSGAKLIPLPSDDDG--KLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAIS 151 (290)
T ss_dssp ETTEHHHHSSTTHHHHHTTCEEEEEBECTGT--BB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHH
T ss_pred cccceeeeeccchhhHhcCcEEEECCCcccC--CCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHH
Confidence 999876432 2335589999999887632 789999999998854333468899999999864 8899999999999
Q ss_pred HHHHHcCCEEEEccCC
Q 018147 297 DFCKKEGLVLLADEVY 312 (360)
Q Consensus 297 ~la~~~~i~lI~DeaY 312 (360)
++|+++|+.++.|.+=
T Consensus 152 ~~a~~~gl~lhmDGAR 167 (290)
T PF01212_consen 152 ELAREHGLPLHMDGAR 167 (290)
T ss_dssp HHHHHHT-EEEEEETT
T ss_pred HHHHhCceEEEEehhh
Confidence 9999999999999874
No 266
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.27 E-value=2.3e-10 Score=113.20 Aligned_cols=201 Identities=13% Similarity=0.093 Sum_probs=118.8
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-CCCCE
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDG 217 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-~~gd~ 217 (360)
--+|.+++++.+.+..... ....+.+ .+....+|+.+.+..... ..+.+++++++++|+..+++.... ....+
T Consensus 56 h~~p~v~~ai~~ql~~l~~-~~~~~~~----~~~~~~la~~l~~~~p~~-~~~~v~f~~SGseA~e~AlklAr~~tgr~~ 129 (425)
T PRK07495 56 HRHPRVIAAVKAQLDRFTH-TCHQVVP----YENYVRLAERLNALVPGD-FAKKTIFVTTGAEAVENAVKIARAATGRSA 129 (425)
T ss_pred CCCHHHHHHHHHHHhhccC-cccCccC----CHHHHHHHHHHHHhCCCC-CCCEEEECCchHHHHHHHHHHHHHhhCCCe
Confidence 3478899999988876431 0111111 233444556555543211 125899999999999999886532 13457
Q ss_pred EEEcCCCchHHHHHHHHc-CC-------------eEEEeecCCCCCcCCC----HHHHHHHHHHHHhcCCCccEEEEe-c
Q 018147 218 ILCPIPQYPLYSASIALH-GG-------------TLVPYYLDEATGWGLE----TSEVKKQLEAAKAKGITVRALVVI-N 278 (360)
Q Consensus 218 Vlv~~P~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~~~~d----~~~L~~~i~~~~~~g~~~k~iil~-~ 278 (360)
|+...-.|.+........ |. .++.+|..... .+.+ ++.+++.+... ..+.++.+|++. .
T Consensus 130 ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~~~~-~~~~~iaavi~EPv 207 (425)
T PRK07495 130 VIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLFKAD-VDPQRVAAIIIEPV 207 (425)
T ss_pred EEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHHHhc-cCCCceEEEEECCc
Confidence 888888887654322211 10 12233332111 1233 33445544321 011246555554 2
Q ss_pred CCCCcc-cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcccccc
Q 018147 279 PGNPTG-QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFF 357 (360)
Q Consensus 279 P~NPTG-~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~R 357 (360)
.+| +| ...+.+.+++|.++|++||+++|+||+|.+|...+. ...+... + ..|| +.+|||++++|++
T Consensus 208 ~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~--~~a~~~~--g---v~pD-----i~tlsK~l~~G~p 274 (425)
T PRK07495 208 QGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGK--LFAMEHH--E---VAAD-----LTTMAKGLAGGFP 274 (425)
T ss_pred cCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCC--ceeeccc--C---CCCC-----EEeehhhhcCCcc
Confidence 256 77 457899999999999999999999999998765553 2111111 0 1133 6889999999999
Q ss_pred ccC
Q 018147 358 SKW 360 (360)
Q Consensus 358 vGw 360 (360)
+||
T Consensus 275 iga 277 (425)
T PRK07495 275 LAA 277 (425)
T ss_pred ceE
Confidence 986
No 267
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.27 E-value=4.2e-11 Score=111.98 Aligned_cols=149 Identities=19% Similarity=0.216 Sum_probs=113.9
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCch----HHHHHHHHcCCeEEEeec
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP----LYSASIALHGGTLVPYYL 244 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~----~~~~~~~~~g~~~~~v~~ 244 (360)
...|.+.||.+- .|. --+.+++++.|+..++..++. +||.|+...--|. .+...++..|.++.++.-
T Consensus 64 ~~vlE~RiAaLE---GG~-----aa~a~aSG~AA~~~ai~~la~-aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~ 134 (426)
T COG2873 64 TDVLEERIAALE---GGV-----AALAVASGQAAITYAILNLAG-AGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDP 134 (426)
T ss_pred HHHHHHHHHHhh---cch-----hhhhhccchHHHHHHHHHhcc-CCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCC
Confidence 355666666553 121 234567789999999999995 9999998886555 456677889999999753
Q ss_pred CCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCC
Q 018147 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (360)
Q Consensus 245 ~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~ 324 (360)
.|++.++++|++ ++|+|++..-.||-+.+++ +++|+++|+++|+.+|+|.....-++-.
T Consensus 135 -------~d~~~~~~aI~~------nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpyl~r----- 193 (426)
T COG2873 135 -------DDPENFEAAIDE------NTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPYLCR----- 193 (426)
T ss_pred -------CCHHHHHHHhCc------ccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcceecc-----
Confidence 368999999998 8999999999999999998 9999999999999999999887632211
Q ss_pred CHHHHHHhhCCCCCCceEEEEeccCcCccc-cccc
Q 018147 325 SFKKVSRSMGYGEKDISLVSFQSVSKGRYF-HFFS 358 (360)
Q Consensus 325 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g-~~Rv 358 (360)
++. .+ -| |+++|.||..+| |--+
T Consensus 194 P~~-----hG---AD---IVvHS~TK~igGhGt~i 217 (426)
T COG2873 194 PIE-----HG---AD---IVVHSATKYIGGHGTAI 217 (426)
T ss_pred hhh-----cC---CC---EEEEeecccccCCcccc
Confidence 111 11 23 899999998876 4433
No 268
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.25 E-value=3.5e-10 Score=110.88 Aligned_cols=176 Identities=18% Similarity=0.233 Sum_probs=125.1
Q ss_pred CCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHH-HHHHHcCCeE
Q 018147 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS-ASIALHGGTL 239 (360)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~-~~~~~~g~~~ 239 (360)
-.|..+....+|.+++++++ | .+.++.|+.++.|+++++...+ ++||.| +..+|.... ..+...|+.+
T Consensus 72 d~Yagd~s~~~LE~~vAe~l----G----~e~aV~v~sGTaAl~ll~~l~v-~pGd~V--p~n~~f~Tt~ahI~~~Ga~f 140 (460)
T PRK13237 72 EAYAGSRNFYHLEETVQEYY----G----FKHVVPTHQGRGAENLLSRIAI-KPGQYV--PGNMYFTTTRYHQELNGGIF 140 (460)
T ss_pred hhhcCCCcHHHHHHHHHHHH----C----CCeEEEeCCHHHHHHHHHHhCC-CCcCEE--CCccchHhhHHHHHhCCcEE
Confidence 35888878999999999998 3 4569999999999998766666 499965 555454443 4377788865
Q ss_pred EEeecC--------CCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCc-ccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 018147 240 VPYYLD--------EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT-GQVLAEENQRAIVDFCKKEGLVLLADE 310 (360)
Q Consensus 240 ~~v~~~--------~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPT-G~~~~~~~l~~i~~la~~~~i~lI~De 310 (360)
+-+..+ ...++.+|++.|+++|++.. ..+++++.+.+++|-. |+..|.+++++|.++|++||+.||+|.
T Consensus 141 vDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~--~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~Da 218 (460)
T PRK13237 141 VDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG--AENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDA 218 (460)
T ss_pred EeeecccccccccCCCCCCCcCHHHHHHHhcccc--CCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEEC
Confidence 555322 22357899999999997521 1256678888888988 799999999999999999999999999
Q ss_pred CCCCC-c-cC----CCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc
Q 018147 311 VYQEN-V-YV----PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY 353 (360)
Q Consensus 311 aY~~~-~-~~----~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 353 (360)
+...- . |- ..-.-.++..++.++.. +.| +...|++|.+.
T Consensus 219 Ara~gna~fI~~re~~y~~~~i~ei~~e~~s-~aD---~~t~S~~K~~~ 263 (460)
T PRK13237 219 TRCVENAYFIKEREEGYQDKSIKEIVHEMFS-YAD---GCTMSGKKDCL 263 (460)
T ss_pred cchhcChhhhcccccccCCCcHhHHhhhccC-cCc---EEEEeCCCCCC
Confidence 87531 1 10 10012345455555542 344 66778999764
No 269
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.25 E-value=2.4e-10 Score=113.06 Aligned_cols=214 Identities=17% Similarity=0.125 Sum_probs=126.2
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
...+||+..+ -.--+|++++++.+.+.+... ..+... ..+....+|+.+.+.... -..+.+++++++++
T Consensus 39 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~---~~~~~~--~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGse 112 (421)
T PRK06777 39 GREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTH---TAYQIV--PYASYVTLAERINALAPI-DGPAKTAFFTTGAE 112 (421)
T ss_pred CCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhccc---cccccc--CChHHHHHHHHHHHhCCC-CCCceEEEeCCcHH
Confidence 4455665444 223478899999988876431 112111 122334455555443210 12368999999999
Q ss_pred HHHHHHHHHccC-CCCEEEEcCCCchHHHHHHHHc-CCe-------------EEEeecCCCCCcC----CCHHHHHHHHH
Q 018147 202 AVHMMMQLLIRS-ENDGILCPIPQYPLYSASIALH-GGT-------------LVPYYLDEATGWG----LETSEVKKQLE 262 (360)
Q Consensus 202 al~~~~~~l~~~-~gd~Vlv~~P~y~~~~~~~~~~-g~~-------------~~~v~~~~~~~~~----~d~~~L~~~i~ 262 (360)
|+..+++....- ...+|+...-.|.+........ |.. +..++.... .++ -+++.+++.+.
T Consensus 113 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~l~~~~~ 191 (421)
T PRK06777 113 AVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNE-LHGVSVEEALSSVERLFK 191 (421)
T ss_pred HHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcc-ccCcCHHHHHHHHHHHHH
Confidence 999998865321 2356888888887665443322 210 111111110 011 12556666664
Q ss_pred HHHhcCCCccEEEEecCCCCccc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCce
Q 018147 263 AAKAKGITVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDIS 341 (360)
Q Consensus 263 ~~~~~g~~~k~iil~~P~NPTG~-~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 341 (360)
... ...++.+|++.-.++..|. +.+.+.+++|.++|++||+++|+||+|.++.+.+. +.++... +..+|
T Consensus 192 ~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~--~~~~~~~-----~~~pD-- 261 (421)
T PRK06777 192 ADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGK--LFAMEYY-----DVKPD-- 261 (421)
T ss_pred hcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCc--hhhhhhc-----CCCCC--
Confidence 210 1124555554433777785 57899999999999999999999999999766553 3222211 11255
Q ss_pred EEEEeccCcCccccccccC
Q 018147 342 LVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 342 ~i~~~S~SK~~~g~~RvGw 360 (360)
++ ++||++++|+|+||
T Consensus 262 iv---~~sK~l~~G~piga 277 (421)
T PRK06777 262 LI---TMAKSLGGGMPISA 277 (421)
T ss_pred EE---eeehhhcCCCceEE
Confidence 22 79999999999997
No 270
>PLN02590 probable tyrosine decarboxylase
Probab=99.24 E-value=6.8e-10 Score=112.08 Aligned_cols=155 Identities=13% Similarity=0.098 Sum_probs=121.3
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCC-----CCCEEEcCChHHHHHHHHHHHcc----------CCCCEEEEcCCC
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPAD-----PNDIFLTDGASPAVHMMMQLLIR----------SENDGILCPIPQ 224 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~-----~~~I~~t~Ga~~al~~~~~~l~~----------~~gd~Vlv~~P~ 224 (360)
...|..+.+..++.+.+.+|+.+..|++-. ...=++|+|++++...++.+... .+.-.|++.+-+
T Consensus 159 ~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~a 238 (539)
T PLN02590 159 GFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQT 238 (539)
T ss_pred cCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCc
Confidence 345666667899999999999999987632 12356788888887666554321 022256677888
Q ss_pred chHHHHHHHHcCC---eEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHH
Q 018147 225 YPLYSASIALHGG---TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (360)
Q Consensus 225 y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~ 301 (360)
|.....++..+|. +++.+|++..+++.+|++.|+++|++..++|..+-+|+.+-..-.||.+=+ +++|+++|++
T Consensus 239 H~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp---l~~Ia~i~~~ 315 (539)
T PLN02590 239 HSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP---LVPLGNIAKK 315 (539)
T ss_pred hHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHH
Confidence 9999999999987 588899887667899999999999987777766666666677778998866 9999999999
Q ss_pred cCCEEEEccCCCCCcc
Q 018147 302 EGLVLLADEVYQENVY 317 (360)
Q Consensus 302 ~~i~lI~DeaY~~~~~ 317 (360)
||+|+.+|.||+.+..
T Consensus 316 ~g~WlHVDaA~GG~al 331 (539)
T PLN02590 316 YGIWLHVDAAYAGNAC 331 (539)
T ss_pred hCCeEEEecchhhhhh
Confidence 9999999999999653
No 271
>PLN02880 tyrosine decarboxylase
Probab=99.22 E-value=6.7e-10 Score=111.63 Aligned_cols=153 Identities=12% Similarity=0.093 Sum_probs=119.9
Q ss_pred CCCCCcCcHHHHHHHHHHHHhhcCCCCCC-----CCEEEcCChHHHHHHHHHHHcc----C------CCCEEEEcCCCch
Q 018147 162 AYSHSQGIKGLRDTIAAGIEARDGFPADP-----NDIFLTDGASPAVHMMMQLLIR----S------ENDGILCPIPQYP 226 (360)
Q Consensus 162 ~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-----~~I~~t~Ga~~al~~~~~~l~~----~------~gd~Vlv~~P~y~ 226 (360)
.|..+.+..++.+.+.+|+.+.+|++-.. ..-++|+|++++...++.+... . +.-.|++++-.|.
T Consensus 113 ~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~ 192 (490)
T PLN02880 113 SWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHS 192 (490)
T ss_pred ccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchH
Confidence 44455567899999999999998875321 2467788888887665544321 0 1124667888899
Q ss_pred HHHHHHHHcCCe---EEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcC
Q 018147 227 LYSASIALHGGT---LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (360)
Q Consensus 227 ~~~~~~~~~g~~---~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~ 303 (360)
...+++..+|.. ++.+|.++++++.+|++.|+++|++..++|..+-+|+.+-....||.+-+ +++|+++|+++|
T Consensus 193 Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~~~~~ 269 (490)
T PLN02880 193 ALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIAKSNG 269 (490)
T ss_pred HHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHHHHcC
Confidence 999999999984 78889887666899999999999987777766666666677888999988 999999999999
Q ss_pred CEEEEccCCCCCcc
Q 018147 304 LVLLADEVYQENVY 317 (360)
Q Consensus 304 i~lI~DeaY~~~~~ 317 (360)
+|+++|.+|+....
T Consensus 270 iwlHVDaA~gg~~~ 283 (490)
T PLN02880 270 MWFHVDAAYAGSAC 283 (490)
T ss_pred CEEEEehhhHHHHH
Confidence 99999999999644
No 272
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.22 E-value=1.5e-09 Score=101.83 Aligned_cols=183 Identities=18% Similarity=0.192 Sum_probs=112.9
Q ss_pred HHHHHHHH-HHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEE---cCChHHHHHHHHHHHccCCCCEE
Q 018147 143 DSIERAWQ-ILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL---TDGASPAVHMMMQLLIRSENDGI 218 (360)
Q Consensus 143 ~v~~~~~~-~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~---t~Ga~~al~~~~~~l~~~~gd~V 218 (360)
.|++++++ .+.+.......+|+... .=|+.+-+-+.+-+| .|.-++ .-++|+||..++..+++ |||++
T Consensus 28 KVL~Af~~~~vs~~hf~~tTGYGY~D---~GRd~le~iyA~vfg----aE~ALVRpq~vSGTHAi~~~Lfg~Lr-pGD~l 99 (403)
T PF06838_consen 28 KVLKAFQENRVSDSHFAGTTGYGYDD---IGRDKLERIYADVFG----AEDALVRPQFVSGTHAIALALFGVLR-PGDEL 99 (403)
T ss_dssp HHHHHHHHTT--GGGCS---TT-TT----HHHHHHHHHHHHHCT-----SEEEEETTS-SHHHHHHHHHHHH---TT-EE
T ss_pred HHHHHHHHcCCChhhcCCCCcCCCCC---ccHHHHHHHHHHHhC----chhhhhcccccchHHHHHHHHHhcCC-CCCeE
Confidence 45666543 22222223466676643 235555555555555 444444 34689999999999996 99999
Q ss_pred EEcC-CCchHHHHHH----------HHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEe-cCCCCcccC
Q 018147 219 LCPI-PQYPLYSASI----------ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQV 286 (360)
Q Consensus 219 lv~~-P~y~~~~~~~----------~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~-~P~NPTG~~ 286 (360)
+... .-|.....++ +..|.+...+++.+++ .+|.+.+++++++ ++|+|+|. +-..-+=..
T Consensus 100 l~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg--~~D~~~i~~~~~~------~tk~v~IQRSrGYs~R~s 171 (403)
T PF06838_consen 100 LSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDG--TIDWEAIKKALKP------NTKMVLIQRSRGYSWRPS 171 (403)
T ss_dssp EESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTS--SB-HHHHHHHHHT------TEEEEEEE-S-TTSSS--
T ss_pred EEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCC--CcCHHHHHHhhcc------CceEEEEecCCCCCCCCC
Confidence 8654 3344444443 5568899999999875 8899999999997 89999998 546666667
Q ss_pred CCHHHHHHHHHHHHHc--CCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccc
Q 018147 287 LAEENQRAIVDFCKKE--GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHF 356 (360)
Q Consensus 287 ~~~~~l~~i~~la~~~--~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~ 356 (360)
++.++++++++++++. ++++++|++|++|+-..+ + .+++ -| ++.+|+-|..+||+
T Consensus 172 l~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~E--P-------~~vG---AD---l~aGSLIKNpGGgi 228 (403)
T PF06838_consen 172 LTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQE--P-------TEVG---AD---LMAGSLIKNPGGGI 228 (403)
T ss_dssp --HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS---G-------GGGT----S---EEEEETTSGGGTTT
T ss_pred CCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccC--c-------cccc---hh---heeccceeCCCCCc
Confidence 8889999999999885 799999999999765443 1 2333 24 88999999988875
No 273
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.22 E-value=2.6e-10 Score=121.65 Aligned_cols=143 Identities=20% Similarity=0.207 Sum_probs=117.6
Q ss_pred CCCCCC---CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH----HHHHHHHHHHccCCCC----EEEEcCCCchHH
Q 018147 160 TGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS----PAVHMMMQLLIRSEND----GILCPIPQYPLY 228 (360)
Q Consensus 160 ~~~Y~~---~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~----~al~~~~~~l~~~~gd----~Vlv~~P~y~~~ 228 (360)
.+.|.| .+|+.++.+.+.+++.+..|. ++|.++++++ +++.++++.+.+.+|| .|+++...|...
T Consensus 554 ~hp~~p~~~~~g~~~~~~~~r~~la~i~g~----~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn 629 (993)
T PLN02414 554 IHPFAPVDQAQGYQEMFEDLGDLLCEITGF----DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTN 629 (993)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHhCC----CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccC
Confidence 444555 457666666666676666563 8999999988 8999999999853488 899999999988
Q ss_pred HHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEE
Q 018147 229 SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (360)
Q Consensus 229 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~ 308 (360)
...+...|.+++.+++++++ .+|+++|+++++++ ..++++|++++|+|-+|...+ +++|+++|+++|+++++
T Consensus 630 ~a~a~~~G~~vv~v~~d~~G--~vDle~L~~~i~~~---~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~v 701 (993)
T PLN02414 630 PASAAMCGMKIVVVGTDAKG--NINIEELRKAAEAH---KDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVYM 701 (993)
T ss_pred HHHHHHCCCEEEEeccCCCC--CcCHHHHHHHHhcc---CCCeEEEEEECCCccccccch---HHHHHHHHHHcCCEEEE
Confidence 88888899999999997553 79999999999742 016889999999999998866 99999999999999999
Q ss_pred ccCCCC
Q 018147 309 DEVYQE 314 (360)
Q Consensus 309 DeaY~~ 314 (360)
|.++..
T Consensus 702 DgAq~~ 707 (993)
T PLN02414 702 DGANMN 707 (993)
T ss_pred EecCHH
Confidence 999843
No 274
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.21 E-value=4.4e-10 Score=111.02 Aligned_cols=183 Identities=13% Similarity=0.083 Sum_probs=114.2
Q ss_pred CCHHHHHHHHHHH-HcCCC--CCCCCCCCCcCcHHHHH----HHHHHHHhhcCCCCCCCCE-EEcCChHHHHHHHHHHHc
Q 018147 140 FSADSIERAWQIL-DQIPG--RATGAYSHSQGIKGLRD----TIAAGIEARDGFPADPNDI-FLTDGASPAVHMMMQLLI 211 (360)
Q Consensus 140 ~p~~v~~~~~~~l-~~~~~--~~~~~Y~~~~G~~~lr~----~ia~~l~~~~g~~~~~~~I-~~t~Ga~~al~~~~~~l~ 211 (360)
++|.+++++...+ ..... .+..-|....-..+|.+ .+++++ | .+.. +.+++++.|+..++.+++
T Consensus 40 ~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~----g----~~~alv~~~SG~~A~~~~l~al~ 111 (416)
T PRK13034 40 TSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLF----G----CDYANVQPHSGSQANGAVYLALL 111 (416)
T ss_pred CCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHh----C----CCceEEecCCcHHHHHHHHHHhc
Confidence 4888998887775 43321 00111111122445555 555554 4 2345 456788999999999998
Q ss_pred cCCCCEEEEcCCCchH-HHHHHHH--cCCeE--EEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccC
Q 018147 212 RSENDGILCPIPQYPL-YSASIAL--HGGTL--VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (360)
Q Consensus 212 ~~~gd~Vlv~~P~y~~-~~~~~~~--~g~~~--~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~ 286 (360)
. +||+|+++...|.. +...++. .+... ..+.++.. ++.+|++++++.++.. ++|+|++.++. +|..
T Consensus 112 ~-~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~~~le~~l~~~-----~~klVi~~~~~--~g~~ 182 (416)
T PRK13034 112 K-PGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRL-TGLIDYDEVEELAKEH-----KPKLIIAGFSA--YPRE 182 (416)
T ss_pred C-CCCEEEEcCccceeeeecCCcceeccceeeeEEcccccc-cCCcCHHHHHHHHhhc-----CCeEEEECCCc--cccc
Confidence 4 99999999998865 2211111 12211 23444333 3578999999988652 57888776655 3555
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 287 ~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
.+ +.+|.++|+++|+++|+|+++.--++.......++ .+ --+++.|++|.++|
T Consensus 183 ~d---l~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~-----------~~-~Di~~~s~~K~l~g 235 (416)
T PRK13034 183 LD---FARFREIADEVGALLMVDMAHIAGLVAAGEHPNPF-----------PH-AHVVTTTTHKTLRG 235 (416)
T ss_pred cC---HHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCC-----------CC-ceEEEEeCcccCCC
Confidence 55 88889999999999999999876554332111111 11 13888999999853
No 275
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.18 E-value=3.8e-09 Score=105.17 Aligned_cols=216 Identities=13% Similarity=0.033 Sum_probs=122.5
Q ss_pred CCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCC-EEEcCChHH
Q 018147 128 PSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPND-IFLTDGASP 201 (360)
Q Consensus 128 p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~-I~~t~Ga~~ 201 (360)
..+||+..+ -.--+|++++++.+.+..... ....|. ..+.+..+|+.+.+.......... +++++++++
T Consensus 39 ~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~-~~~~~~----~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsE 113 (442)
T TIGR00709 39 KEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLP-LHTLDL----TTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGAD 113 (442)
T ss_pred CEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccC-cccccc----CcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHH
Confidence 345555444 223478899999888876321 011111 124555666666654321101134 455689999
Q ss_pred HHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHc-CC------------eEEEeecCCC--CCcC----CCHHHH----
Q 018147 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIALH-GG------------TLVPYYLDEA--TGWG----LETSEV---- 257 (360)
Q Consensus 202 al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~-g~------------~~~~v~~~~~--~~~~----~d~~~L---- 257 (360)
|+..+++.... ....+|+...-.|.+....+... |. .+..++.... ..|. .+.+.+
T Consensus 114 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (442)
T TIGR00709 114 AVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYF 193 (442)
T ss_pred HHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHH
Confidence 99999887542 13457888888888765443332 20 1222222111 0011 112222
Q ss_pred HHHHHHHHhcCCCccEEEEecC-CCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 258 KKQLEAAKAKGITVRALVVINP-GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 258 ~~~i~~~~~~g~~~k~iil~~P-~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
++.+........++.++++... +|+...+.+++.+++|.++|++||+++|.||+|.+|...+. +..+... + .
T Consensus 194 ~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~--~~a~~~~--g---v 266 (442)
T TIGR00709 194 ENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGT--MFAFEHA--G---I 266 (442)
T ss_pred HHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCc--hhHHHHc--C---C
Confidence 2333211111124666666644 45544557899999999999999999999999999766553 3332221 1 2
Q ss_pred CCCceEEEEeccCcCccccccccC
Q 018147 337 EKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
.|| +++ +||++++|+++||
T Consensus 267 ~PD--iv~---~gK~l~~G~Piga 285 (442)
T TIGR00709 267 EPD--FVV---MSKAVGGGLPLAV 285 (442)
T ss_pred CCc--EEE---EcccccCCcccEE
Confidence 366 233 8999999999986
No 276
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.18 E-value=1.8e-09 Score=106.55 Aligned_cols=217 Identities=12% Similarity=0.041 Sum_probs=126.0
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCC-CCCCEEE-cCCh
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPA-DPNDIFL-TDGA 199 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~-~~~~I~~-t~Ga 199 (360)
...+||+..+ -.--+|.+++++.+.+.+... .... ....+.+..+|+.+.+....+. ..+.+++ ++++
T Consensus 34 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~--~~~~---~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sG 108 (412)
T TIGR02407 34 GKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGI--IHSL---DMATEAKREFLETFNEIILKPRGLDYKVQFPGPTG 108 (412)
T ss_pred CCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccc--eecc---ccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCc
Confidence 4455666444 224488899999988875322 1111 1123445556666655321011 1124655 5889
Q ss_pred HHHHHHHHHHHccC-CCCEEEEcCCCchHHHHHHHHc-CC------------eEEEeecCCCCCc-CCCHHHHHHHHHHH
Q 018147 200 SPAVHMMMQLLIRS-ENDGILCPIPQYPLYSASIALH-GG------------TLVPYYLDEATGW-GLETSEVKKQLEAA 264 (360)
Q Consensus 200 ~~al~~~~~~l~~~-~gd~Vlv~~P~y~~~~~~~~~~-g~------------~~~~v~~~~~~~~-~~d~~~L~~~i~~~ 264 (360)
++|+..+++....- ...+|+...-.|.+....+... |. .++.+|....... .-+++.+++.+.+.
T Consensus 109 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~ 188 (412)
T TIGR02407 109 TNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDS 188 (412)
T ss_pred hHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhc
Confidence 99999998876421 3467888888887665433321 21 1222332110000 01366777777542
Q ss_pred HhcCCCccEEEEecCCCCccc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEE
Q 018147 265 KAKGITVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLV 343 (360)
Q Consensus 265 ~~~g~~~k~iil~~P~NPTG~-~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i 343 (360)
.....++.+|++.--+++.|. +.+.+.+++|.++|+++|+++|+||++.+|...+. ...+. ...-.||
T Consensus 189 ~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~--~~a~~-----~~~v~PD---- 257 (412)
T TIGR02407 189 SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGT--FFSFE-----PAGIEPD---- 257 (412)
T ss_pred cCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch--hHHhc-----ccCCCCC----
Confidence 111124555554433788888 56888999999999999999999999998643332 11111 0111266
Q ss_pred EEeccCcCccc-cccccC
Q 018147 344 SFQSVSKGRYF-HFFSKW 360 (360)
Q Consensus 344 ~~~S~SK~~~g-~~RvGw 360 (360)
+.++||++++ |+|+||
T Consensus 258 -i~~~~K~lg~~G~piga 274 (412)
T TIGR02407 258 -IVCLSKSISGYGLPLAL 274 (412)
T ss_pred -EEEechhccCCccceeE
Confidence 2358999998 999987
No 277
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.18 E-value=1.5e-09 Score=104.36 Aligned_cols=161 Identities=15% Similarity=0.215 Sum_probs=122.4
Q ss_pred cCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc
Q 018147 133 RSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR 212 (360)
Q Consensus 133 ~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~ 212 (360)
+..+|...++++++++.+.. .+...+ -...+-+.+.+.++..++.. +.+-++++.+++.++..++..++.
T Consensus 9 l~PGP~~v~~~V~~am~~~~-------~~h~s~--~F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~ 78 (383)
T COG0075 9 LTPGPVPVPPRVLLAMARPM-------VGHRSP--DFVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVE 78 (383)
T ss_pred eeCCCCCCCHHHHHHhcCCC-------CCCCCH--HHHHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHhccC
Confidence 44456677888887764321 122222 13445555555555555522 224466778899999999999995
Q ss_pred CCCCEEEEcCCCch--HHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHH
Q 018147 213 SENDGILCPIPQYP--LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (360)
Q Consensus 213 ~~gd~Vlv~~P~y~--~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~ 290 (360)
|||+|++...... .+..+++.+|++++.+...... .+|++++++++++ +++.++|.++|.-.+||...+
T Consensus 79 -pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~--~v~p~~v~~~L~~----~~~~~~V~~vH~ETSTGvlnp-- 149 (383)
T COG0075 79 -PGDKVLVVVNGKFGERFAEIAERYGAEVVVLEVEWGE--AVDPEEVEEALDK----DPDIKAVAVVHNETSTGVLNP-- 149 (383)
T ss_pred -CCCeEEEEeCChHHHHHHHHHHHhCCceEEEeCCCCC--CCCHHHHHHHHhc----CCCccEEEEEeccCcccccCc--
Confidence 9999999987776 4678999999999999887553 7899999999984 346889999999999999988
Q ss_pred HHHHHHHHHHHcCCEEEEccCCC
Q 018147 291 NQRAIVDFCKKEGLVLLADEVYQ 313 (360)
Q Consensus 291 ~l~~i~~la~~~~i~lI~DeaY~ 313 (360)
+++|+++|++||.++|+|.+-+
T Consensus 150 -l~~I~~~~k~~g~l~iVDaVsS 171 (383)
T COG0075 150 -LKEIAKAAKEHGALLIVDAVSS 171 (383)
T ss_pred -HHHHHHHHHHcCCEEEEEeccc
Confidence 9999999999999999998865
No 278
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.17 E-value=3e-09 Score=105.36 Aligned_cols=216 Identities=14% Similarity=0.086 Sum_probs=123.6
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCC-CEEE-cCCh
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFL-TDGA 199 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~-~I~~-t~Ga 199 (360)
...+||+..+ -.--+|.+.+++.+.+..... .... ......+..+++.+.+....+...+ .+++ ++++
T Consensus 38 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~--~~~~---~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sG 112 (425)
T PRK09264 38 GKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGI--THGL---DMHTTAKREFLETFEETILKPRGLDYKVQFTGPTG 112 (425)
T ss_pred CCEeeecccchhhccCCCCCHHHHHHHHHHHHhccc--cccc---ccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCH
Confidence 4455665444 223478899999888875322 1111 0112345555665554321111112 5656 5799
Q ss_pred HHHHHHHHHHHccC-CCCEEEEcCCCchHHHHHHHHc-C------------CeEEEeecCCCCCcC-CCHHHHHHHHHHH
Q 018147 200 SPAVHMMMQLLIRS-ENDGILCPIPQYPLYSASIALH-G------------GTLVPYYLDEATGWG-LETSEVKKQLEAA 264 (360)
Q Consensus 200 ~~al~~~~~~l~~~-~gd~Vlv~~P~y~~~~~~~~~~-g------------~~~~~v~~~~~~~~~-~d~~~L~~~i~~~ 264 (360)
++|+..+++....- ...+|+.....|.+........ | ..+..+|........ -|++++++.+...
T Consensus 113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~ 192 (425)
T PRK09264 113 TNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDS 192 (425)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhc
Confidence 99999998876421 3457888888887654332221 1 012333322110001 2567788877643
Q ss_pred HhcCCCccEEEEecC-CCCccc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceE
Q 018147 265 KAKGITVRALVVINP-GNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISL 342 (360)
Q Consensus 265 ~~~g~~~k~iil~~P-~NPTG~-~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 342 (360)
.....++.+| |..| ..-.|. +.+.+.+++|.++|++||+++|+||++.++...+. ...+.. .+ -.||
T Consensus 193 ~~~~~~~aav-i~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~--~~~~~~--~~---v~PD--- 261 (425)
T PRK09264 193 SSGVDLPAAV-IVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGT--FFSFER--AG---ITPD--- 261 (425)
T ss_pred cCCCCceEEE-EEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccH--HHHHhh--cC---CCCC---
Confidence 1111134444 4555 444565 56888999999999999999999999998644442 111111 11 1256
Q ss_pred EEEeccCcCccc-cccccC
Q 018147 343 VSFQSVSKGRYF-HFFSKW 360 (360)
Q Consensus 343 i~~~S~SK~~~g-~~RvGw 360 (360)
+-+|||++++ |+++||
T Consensus 262 --i~t~~K~l~~~G~piga 278 (425)
T PRK09264 262 --IVTLSKSISGYGLPMAL 278 (425)
T ss_pred --EEEeccccCCCccceEE
Confidence 2367999998 999885
No 279
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.17 E-value=1.2e-09 Score=108.10 Aligned_cols=198 Identities=14% Similarity=0.135 Sum_probs=119.6
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-------
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------- 212 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~------- 212 (360)
-+|++.+++.+.+..........|. .+.+..+|+.+.+... -..+.+++++++++|+..+++....
T Consensus 59 ~~p~v~~ai~~q~~~~~~~~~~~~~-----~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~A~klar~~~~~~~~ 131 (423)
T PRK05964 59 NHPYIDQAIREQLDRLDHVIFAGFT-----HEPAERLAQRLVALTP--GGLDHVFFSDSGSVAVEVALKMALQYWRNRGE 131 (423)
T ss_pred CCHHHHHHHHHHHhhCCCccccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCC
Confidence 3788999999888764320111222 2345566666655432 1236899999999999999886531
Q ss_pred CCCCEEEEcCCCchHHHHHHHHcCCe-------------EEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecC
Q 018147 213 SENDGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (360)
Q Consensus 213 ~~gd~Vlv~~P~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P 279 (360)
....+|+...-.|.+........... +..++....+....+++.+++.+.+. +.++.+|++ .|
T Consensus 132 ~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~---~~~iaavi~-Ep 207 (423)
T PRK05964 132 PGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKH---AGEIAAFIV-EP 207 (423)
T ss_pred CCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC---CCcEEEEEE-ec
Confidence 12357888888887654333222111 12222221100011267777777531 124555555 45
Q ss_pred --CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcccc-
Q 018147 280 --GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFH- 355 (360)
Q Consensus 280 --~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~- 355 (360)
++..|... +.+.+++|.++|++||+++|+||++.++...+. ...+ . .....|| +-++||++++|
T Consensus 208 ~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~--~~a~-~----~~~v~pD-----i~~~~K~l~gG~ 275 (423)
T PRK05964 208 LVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGT--LFAC-E----QAGVSPD-----IMCLSKGLTGGY 275 (423)
T ss_pred ccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcc--hhHH-H----hcCCCCC-----eeeeehhhhcCc
Confidence 66778766 889999999999999999999999988655442 1111 1 1111255 24678999887
Q ss_pred ccccC
Q 018147 356 FFSKW 360 (360)
Q Consensus 356 ~RvGw 360 (360)
+++|+
T Consensus 276 ~p~~a 280 (423)
T PRK05964 276 LPLAA 280 (423)
T ss_pred ccceE
Confidence 77763
No 280
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.17 E-value=1.7e-09 Score=107.45 Aligned_cols=213 Identities=13% Similarity=0.110 Sum_probs=122.8
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
...++|+..+ -.--+|.+++++.+.++.........|. .+....+++.+.+... -..+.+++++++++
T Consensus 42 G~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~-----~~~~~~la~~L~~~~~--~~~~~v~f~~SGse 114 (433)
T PRK08117 42 GKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIY-----YESILKLAEELAEITP--GGLDCFFFSNSGAE 114 (433)
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEeCcHHH
Confidence 4456666554 2235788999999888764321111121 2344455555555431 12467999999999
Q ss_pred HHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHH-HcC--C-----------eEEEeecCCCC--CcC--------CCHHH
Q 018147 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIA-LHG--G-----------TLVPYYLDEAT--GWG--------LETSE 256 (360)
Q Consensus 202 al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~-~~g--~-----------~~~~v~~~~~~--~~~--------~d~~~ 256 (360)
|...+++.... .....|+...-.|.+...... ..+ . .+..+|..... .++ -+++.
T Consensus 115 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (433)
T PRK08117 115 AIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRD 194 (433)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHH
Confidence 99999886421 123578887777776543321 111 0 01222221100 001 14455
Q ss_pred HHHHHHHHHhcCCCccEEEEecC-CCCcccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhC
Q 018147 257 VKKQLEAAKAKGITVRALVVINP-GNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P-~NPTG~~-~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~ 334 (360)
+++.++.... +.++ +.+|..| ..-.|.+ .+.+.+++|.++|++||+++|+||+|.+|...+. .... . ..
T Consensus 195 l~~~~~~~~~-~~~~-aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~--~~~~-~---~~- 265 (433)
T PRK08117 195 LESLFKHQVT-PEEV-AAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGE--WFAA-Q---TF- 265 (433)
T ss_pred HHHHHHhccC-CCcE-EEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCcccc--chhH-h---hc-
Confidence 6665543111 1244 4455555 4445665 4678899999999999999999999999655543 1111 1 11
Q ss_pred CCCCCceEEEEeccCcCccccccccC
Q 018147 335 YGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 335 ~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
+..+| +.+|||++++|+++||
T Consensus 266 gv~pD-----i~t~sK~lg~G~piga 286 (433)
T PRK08117 266 GVVPD-----IMTIAKGIASGLPLSA 286 (433)
T ss_pred CCCCC-----EeehhhhccCCCccee
Confidence 11144 4699999999999986
No 281
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.17 E-value=6.5e-10 Score=106.16 Aligned_cols=206 Identities=13% Similarity=0.097 Sum_probs=132.1
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
..++||+..+ -.--+|.+++++.+.++.... ....|.. +.+.++|+.+.+..+ ..+.|+++++++|
T Consensus 41 G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h-~sn~~~~-----~~~~~la~~L~~~s~---~~d~vff~NSGaE 111 (404)
T COG4992 41 GREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWH-VSNLFYN-----EPQAELAEKLVELSP---FADRVFFCNSGAE 111 (404)
T ss_pred CCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhh-cccccCC-----hHHHHHHHHHHhhCc---cccEEEEcCCcHH
Confidence 4556676655 335689999999888776532 1222322 344555555544322 3789999999999
Q ss_pred HHHHHHHHHcc--C-C-CCEEEEcCCCchHHHHHHHHcCCeEE----EeecCCCCCcC--CCHHHHHHHHHHHHhcCCCc
Q 018147 202 AVHMMMQLLIR--S-E-NDGILCPIPQYPLYSASIALHGGTLV----PYYLDEATGWG--LETSEVKKQLEAAKAKGITV 271 (360)
Q Consensus 202 al~~~~~~l~~--~-~-gd~Vlv~~P~y~~~~~~~~~~g~~~~----~v~~~~~~~~~--~d~~~L~~~i~~~~~~g~~~ 271 (360)
|+..++..... . + ..+|+.....|.+-.-..-..+.+.. +-|+.+.-.+. -|++++++++++ ++
T Consensus 112 A~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~~------~t 185 (404)
T COG4992 112 ANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAIDE------DT 185 (404)
T ss_pred HHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhcc------Ce
Confidence 99999987643 1 1 23677777776643222111222211 01222211111 189999999988 78
Q ss_pred cEEEEecCCCCcccCCCHH-HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCc
Q 018147 272 RALVVINPGNPTGQVLAEE-NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSK 350 (360)
Q Consensus 272 k~iil~~P~NPTG~~~~~~-~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK 350 (360)
.+|++---+--.|++.+.+ -++++-++|++||+++|.||+..++...+. +..+..+ .-.|| +-++.|
T Consensus 186 aAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk--~fA~e~~-----gV~PD-----I~tlaK 253 (404)
T COG4992 186 AAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGK--LFAYEHY-----GVEPD-----ILTLAK 253 (404)
T ss_pred EEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccch--HHHHHHh-----CCCCC-----EEEeec
Confidence 7777765577778777654 599999999999999999999999766664 2222111 22377 457889
Q ss_pred Ccccccccc
Q 018147 351 GRYFHFFSK 359 (360)
Q Consensus 351 ~~~g~~RvG 359 (360)
+++||.-||
T Consensus 254 ~LgGG~Pig 262 (404)
T COG4992 254 ALGGGFPIG 262 (404)
T ss_pred cccCCccce
Confidence 999997665
No 282
>PRK15029 arginine decarboxylase; Provisional
Probab=99.16 E-value=9.9e-10 Score=114.25 Aligned_cols=150 Identities=17% Similarity=0.155 Sum_probs=113.0
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCC----C-----HHHHHHHH
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGL----E-----TSEVKKQL 261 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~----d-----~~~L~~~i 261 (360)
...++++|+|.++..++.+++. +||.|+++..+|-+..+.+.+.|+++++++... +.|++ + ++.+++++
T Consensus 222 ~t~FlvNGST~gn~a~i~a~~~-~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~-~~~Gi~~~i~~~~~~~e~i~~~l 299 (755)
T PRK15029 222 RSWSVVVGTSGSNRTIMQACMT-DNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSR-NRYGIIGPIYPQEMQPETLQKKI 299 (755)
T ss_pred cEEEEeCChhHHHHHHHHHhcC-CCCEEEeecccHHHHHHHHHHcCCeEEEecccc-cccCCccCCCccccCHHHHHHHH
Confidence 4688999999999999999995 999999999999999999999999999986443 23333 4 88999988
Q ss_pred HHHH----hcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC-ccCCCCCCC--CHHHHHH-h-
Q 018147 262 EAAK----AKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN-VYVPEKKFH--SFKKVSR-S- 332 (360)
Q Consensus 262 ~~~~----~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~-~~~~~~~~~--s~~~~~~-~- 332 (360)
++.. +++.++++++|++|+. -|.+.+ +++|+++|+++++.|++||||+.. .|.+. ++ +.....+ .
T Consensus 300 ~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F~~~--~p~~sa~~~~~~~~ 373 (755)
T PRK15029 300 SESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARFNPI--YADHYAMRGEPGDH 373 (755)
T ss_pred HhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEEEECccccccccCcc--cccccccccccccc
Confidence 6531 1234566999999987 599988 899999999999999999999773 33332 22 1110000 0
Q ss_pred hCCCCCCceEEEEeccCcCcc
Q 018147 333 MGYGEKDISLVSFQSVSKGRY 353 (360)
Q Consensus 333 ~~~~~~~~~~i~~~S~SK~~~ 353 (360)
.+ .+ +++++|.-|.++
T Consensus 374 ~G---ad--~~vvqStHKtL~ 389 (755)
T PRK15029 374 NG---PT--VFATHSTHKLLN 389 (755)
T ss_pred CC---Cc--eEEEEchhhccc
Confidence 11 22 589999999765
No 283
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.16 E-value=2.1e-09 Score=107.01 Aligned_cols=216 Identities=13% Similarity=0.106 Sum_probs=125.1
Q ss_pred CCCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 018147 126 DHPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (360)
Q Consensus 126 ~~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~ 200 (360)
+...+||+..+ -.--++++++++.+.+.+.. . +....+..+.+..+|+.+.+..... ..+.++++++++
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~--~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f~~sGs 127 (443)
T PRK06058 54 DGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFT---H--TCFMVTPYEGYVAVAEQLNRLTPGD-HEKRSALFNSGA 127 (443)
T ss_pred CCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhcc---C--ccccccCCHHHHHHHHHHHHhCCCC-CCCEEEEeCCcH
Confidence 35567777555 23447889999998887632 1 1111223456667777776654311 124788888889
Q ss_pred HHHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHc-CC-------------eEEEeecC--CCC--CcCCCH-HHHHHH
Q 018147 201 PAVHMMMQLLIR-SENDGILCPIPQYPLYSASIALH-GG-------------TLVPYYLD--EAT--GWGLET-SEVKKQ 260 (360)
Q Consensus 201 ~al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~-g~-------------~~~~v~~~--~~~--~~~~d~-~~L~~~ 260 (360)
+|+..+++.... ...++|+.....|.++....... +. .+..++.. ... .+..+. +.+++.
T Consensus 128 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (443)
T PRK06058 128 EAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARA 207 (443)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHH
Confidence 999999884321 13478999999998776443322 11 11112211 000 001111 222222
Q ss_pred HHHHHh--cCCCccEEEEecCCCCcccCC--CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 261 LEAAKA--KGITVRALVVINPGNPTGQVL--AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 261 i~~~~~--~g~~~k~iil~~P~NPTG~~~--~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
++...+ ...++. .+|..|-+..|.++ +.+.+++|.++|++||+++|.||++.+|...+. .... +..+.
T Consensus 208 ~~~l~~~~~~~~iA-avi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~--~fa~-----~~~gv 279 (443)
T PRK06058 208 ITVIEKQVGADNLA-AVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGA--WFAC-----EHEGI 279 (443)
T ss_pred HHHHHHhhCCCceE-EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChh--hhHH-----HhcCC
Confidence 221111 112454 45577866665433 477899999999999999999999999765543 2111 11112
Q ss_pred CCCceEEEEeccCcCccccccccC
Q 018147 337 EKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
.|| ++ +++|++++|+++|+
T Consensus 280 ~PD--iv---~~gK~l~~G~Pi~a 298 (443)
T PRK06058 280 VPD--LI---TTAKGIAGGLPLSA 298 (443)
T ss_pred CCC--EE---EEcccccCCCccEE
Confidence 366 23 44899999999885
No 284
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.15 E-value=4.4e-10 Score=105.31 Aligned_cols=162 Identities=14% Similarity=0.148 Sum_probs=113.0
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCC
Q 018147 137 QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (360)
Q Consensus 137 ~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd 216 (360)
..+..+++++++.+.-.. ....|+...-...+.+.+++. +| .+.++++.++|++..+++...++ ||+
T Consensus 9 ~~g~~~~m~eam~~a~~~----~~~~YG~D~~~~~~e~~~ae~----~g----~~a~~Fv~sGT~aN~lal~~~~~-~~~ 75 (342)
T COG2008 9 VAGPTPEMREALAAANAV----GDDVYGEDPTTNALEQRIAEL----FG----KEAALFVPSGTQANQLALAAHCQ-PGE 75 (342)
T ss_pred cCCCCHHHHHHHHhcccc----CCCCCCCCHHHHHHHHHHHHH----hC----CceEEEecCccHHHHHHHHHhcC-CCC
Confidence 456677788776654321 355677665444444444444 44 27899999999999999999995 999
Q ss_pred EEEEcCCCchHHHH--HHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHH
Q 018147 217 GILCPIPQYPLYSA--SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRA 294 (360)
Q Consensus 217 ~Vlv~~P~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~ 294 (360)
.|++..-.|..... .++.++ ....++..+..+-.+++++++..+...--....+.++++.|.+|--|.++|.+++++
T Consensus 76 ~vi~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~ 154 (342)
T COG2008 76 SVICHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEA 154 (342)
T ss_pred eEEEeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHH
Confidence 99999877653321 233332 122333333333489999999988751102235667777777778899999999999
Q ss_pred HHHHHHHcCCEEEEccCC
Q 018147 295 IVDFCKKEGLVLLADEVY 312 (360)
Q Consensus 295 i~~la~~~~i~lI~DeaY 312 (360)
|.++|+++|+.|..|.+=
T Consensus 155 i~~~~k~~~l~LHmDGAR 172 (342)
T COG2008 155 ISAVCKEHGLPLHMDGAR 172 (342)
T ss_pred HHHHHHHhCCceeechHH
Confidence 999999999999999864
No 285
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.15 E-value=1.7e-09 Score=108.04 Aligned_cols=185 Identities=14% Similarity=0.095 Sum_probs=117.4
Q ss_pred CCCHHHHHHHHHHHHcCC--CCCCCCCCC-CcCcHH----HHHHHHHHHHhhcCCCCCCCCEEEc---CChHHHHHHHHH
Q 018147 139 LFSADSIERAWQILDQIP--GRATGAYSH-SQGIKG----LRDTIAAGIEARDGFPADPNDIFLT---DGASPAVHMMMQ 208 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~--~~~~~~Y~~-~~G~~~----lr~~ia~~l~~~~g~~~~~~~I~~t---~Ga~~al~~~~~ 208 (360)
.+++.+++.+...+.+.. ......|.. ..-... .|+.+++++ | ++++++.++ +|++++...++.
T Consensus 45 ~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf----~--a~~~~~~~~~~~~sgt~an~~v~~ 118 (452)
T PTZ00094 45 FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF----G--LDPEEWGVNVQPYSGSPANFAVYT 118 (452)
T ss_pred cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCcccceeecCCCchHHHHHHHHH
Confidence 357888888777765532 111112221 111222 233444444 4 466777666 788999999999
Q ss_pred HHccCCCCEEEEcCCCchHHHHHHHH----------cCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEec
Q 018147 209 LLIRSENDGILCPIPQYPLYSASIAL----------HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN 278 (360)
Q Consensus 209 ~l~~~~gd~Vlv~~P~y~~~~~~~~~----------~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~ 278 (360)
++++ +||+|++....+..+...... .+.++..++++.+ ..+|+++|++.+++. +++++++.+
T Consensus 119 al~~-~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~--g~id~~~L~~~l~~~-----~~~lvi~~~ 190 (452)
T PTZ00094 119 ALLQ-PHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEK--GLIDYDKLEELAKAF-----RPKLIIAGA 190 (452)
T ss_pred HhcC-CCCEEEecccccCCcccccccccccccccceeeeeeeecccCCC--CCcCHHHHHHHHHHh-----CCCEEEEeC
Confidence 9984 999999988777655433211 1133445555543 479999999999753 567666543
Q ss_pred CCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 279 PGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 279 P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
+.+|...+ +++|.++|+++|+++++|+++.--.........++ . .-| +++.|..|.+.|
T Consensus 191 --s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~----~-----~~D---~l~~S~hK~l~G 249 (452)
T PTZ00094 191 --SAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPF----P-----YAD---VVTTTTHKSLRG 249 (452)
T ss_pred --CCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCC----C-----CCc---EEEcCCccCCCC
Confidence 34899988 88888999999999999999976544332101111 0 123 778999997753
No 286
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.14 E-value=3e-09 Score=104.32 Aligned_cols=189 Identities=13% Similarity=0.096 Sum_probs=119.7
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-----CCC
Q 018147 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-----SEN 215 (360)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-----~~g 215 (360)
+|.+++++.+.+..... .+. ....++...+|+++.+.. ..+.+++++++++|+..+++.... .+|
T Consensus 54 ~p~v~~a~~~q~~~~~~----~~~--~~~~~~~~~la~~l~~~~----~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~ 123 (395)
T PRK03715 54 NPGMVEALAAQAEKLIN----PSP--AFYNEPMAKLAGLLTQHS----CFDKVFFANSGAEANEGAIKLARKWGRKHKNG 123 (395)
T ss_pred CHHHHHHHHHHHHhccc----ccc--cccCHHHHHHHHHHhhcc----CCCEEEEeCCcHHHHHHHHHHHHHHhhccCCC
Confidence 78899999888775421 111 123567778888886542 246899999999999999988741 123
Q ss_pred -CEEEEcCCCchHHHH-HHHHcCCeEE---EeecCCCCCc----CCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccC
Q 018147 216 -DGILCPIPQYPLYSA-SIALHGGTLV---PYYLDEATGW----GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (360)
Q Consensus 216 -d~Vlv~~P~y~~~~~-~~~~~g~~~~---~v~~~~~~~~----~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~ 286 (360)
..|+.....|..... .+...|.... ..|... ++ ..|++.+++.+.+ ++.+|++.-.++..|.+
T Consensus 124 r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l~~------~~aavi~Epv~~~gG~~ 195 (395)
T PRK03715 124 AYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVP--GFPKAELNDIASVEKLITD------KTVAVMLEPVQGEGGVI 195 (395)
T ss_pred CcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCC--CceeeCCchHHHHHHHcCC------CceEEEEeCCcCCCCCc
Confidence 568888888876543 3333332211 111111 11 1368888887754 56666555435555655
Q ss_pred C-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcccccccc
Q 018147 287 L-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSK 359 (360)
Q Consensus 287 ~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvG 359 (360)
. +.+.+++|.++|++||+++|+||++.++.-.+. ...+.. .++ .|| +-+|||++++|.-+|
T Consensus 196 ~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~--~~a~~~--~gv---~PD-----i~t~gK~lg~G~p~~ 257 (395)
T PRK03715 196 PATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGT--LFAYEL--SGI---EPD-----IMTLGKGIGGGVPLA 257 (395)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcc--hhhHhh--cCC---CCc-----eeeehhhhhCCcceE
Confidence 4 678899999999999999999999998533332 111111 111 256 357899999876554
No 287
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.11 E-value=2.8e-09 Score=105.85 Aligned_cols=165 Identities=13% Similarity=0.162 Sum_probs=127.4
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccC----C-
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS----E- 214 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~----~- 214 (360)
.++.+.+.+...+..... .+..|+ +..++.+.+..++.+.++.+ ..-.=.+|.|+|+++.+.+.+..+. .
T Consensus 74 ~~~~a~~~~~~~~~~nl~-d~~~~p---~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~ 148 (460)
T COG0076 74 VPPVAAELLVSALNKNLG-DPDESP---AAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRAL 148 (460)
T ss_pred CHHHHHHHHHHHHhhcCC-CcccCh---hHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhh
Confidence 355555556666655432 344444 57899999999999998865 3334588999999998777664320 1
Q ss_pred --CC------EEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccC
Q 018147 215 --ND------GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (360)
Q Consensus 215 --gd------~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~ 286 (360)
+. .|+++.-.|..+...++.+|.....++.+.. ++.+|++++++++++....| +|+.+-+..+||.+
T Consensus 149 ~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~i 223 (460)
T COG0076 149 AESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSI 223 (460)
T ss_pred hcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCc----eEEEEecCCCCCcc
Confidence 11 6999999999999999999999999999875 57999999999999842111 37777888899987
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCCCCcc
Q 018147 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVY 317 (360)
Q Consensus 287 ~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~ 317 (360)
=+ +++|.++|+++++|+++|.||++++.
T Consensus 224 Dd---i~~ia~ia~~~~i~lHVDAA~GG~~~ 251 (460)
T COG0076 224 DD---IEELADIAEEYGIWLHVDAAFGGFLL 251 (460)
T ss_pred CC---HHHHHHHHHHcCCcEEEEccccceee
Confidence 55 99999999999999999999999765
No 288
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.11 E-value=2e-09 Score=104.34 Aligned_cols=189 Identities=13% Similarity=0.104 Sum_probs=117.5
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCC-CEE
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGI 218 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~g-d~V 218 (360)
-+|++++++.+.+.+.... ...|.. +.+..+++.+.+..+ .+.+++++++++|+..+++......| ++|
T Consensus 41 ~~p~v~~ai~~ql~~~~~~-~~~~~~-----~~~~~la~~l~~~~~----~~~v~~~~SGseA~e~Alklar~~~gr~~I 110 (364)
T PRK04013 41 NHPEWVEEMSEQLEKLVVA-GPMFEH-----EEKEEMLEELSKWVN----YEYVYMGNSGTEAVEAALKFARLYTGRKEI 110 (364)
T ss_pred CCHHHHHHHHHHHHhcCCc-cCCcCC-----HHHHHHHHHHHhhcC----CCEEEEeCchHHHHHHHHHHHHHHhCCCEE
Confidence 3688999999888875321 112332 233444444443322 36899999999999999997753345 889
Q ss_pred EEcCCCchHHHHHHHHc-C-------CeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccC-CCH
Q 018147 219 LCPIPQYPLYSASIALH-G-------GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAE 289 (360)
Q Consensus 219 lv~~P~y~~~~~~~~~~-g-------~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~-~~~ 289 (360)
+...-+|.+........ + .......... -.| .|.+.+++.+.+ ++.+|++...+...|.. .+.
T Consensus 111 i~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~-~~~-~d~~~l~~~i~~------~~aAvivEpi~g~gG~~~~~~ 182 (364)
T PRK04013 111 IAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKH-IPF-NDVEAAKEAITK------ETAAVIFEPIQGEGGIVPAKE 182 (364)
T ss_pred EEECCccccCchhhccCCCCcccccCCCCCCCCcEE-ecC-CCHHHHHHHhcC------CcEEEEEcCCcCCCCCcCCCH
Confidence 99998888765333221 1 1100000000 011 267888887764 68777766555444554 456
Q ss_pred HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcccccccc
Q 018147 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSK 359 (360)
Q Consensus 290 ~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvG 359 (360)
+-+++|.++|++||+++|+||+..++ ..+. +..+.. ....|| +-+++|++++|+-+|
T Consensus 183 ~yl~~lr~lc~~~gillI~DEv~tG~-RtG~--~~a~~~-----~gv~PD-----iv~~gK~lggG~P~~ 239 (364)
T PRK04013 183 EFVKTLRDLTEDVGALLIADEVQSGL-RTGK--FLAIEH-----YKVEPD-----IVTMGKGIGNGVPVS 239 (364)
T ss_pred HHHHHHHHHHHHcCCEEEEechhhcC-CCCc--hhHHHh-----cCCCCC-----EEEecccccCCceeE
Confidence 78999999999999999999999986 4442 222211 112367 345599999886543
No 289
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.10 E-value=7.3e-09 Score=104.64 Aligned_cols=150 Identities=11% Similarity=0.066 Sum_probs=112.4
Q ss_pred CCCCCCcCcHHHHHHHHHHHHhhcCCC---------CCC--CCEEEcCChHHHHHHHHHHHcc---C-------------
Q 018147 161 GAYSHSQGIKGLRDTIAAGIEARDGFP---------ADP--NDIFLTDGASPAVHMMMQLLIR---S------------- 213 (360)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~---------~~~--~~I~~t~Ga~~al~~~~~~l~~---~------------- 213 (360)
..|..+....++.+.+.+|+.+..+.. -.+ ..-++|+|+|+|...++.+... .
T Consensus 119 ~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl 198 (522)
T TIGR03799 119 VKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGL 198 (522)
T ss_pred ceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccc
Confidence 345555567899999999998876411 011 2347788888888776655321 0
Q ss_pred ---------CCCEEEEcCCCchHHHHHHHHcCC---eEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCC
Q 018147 214 ---------ENDGILCPIPQYPLYSASIALHGG---TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN 281 (360)
Q Consensus 214 ---------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~N 281 (360)
++..|+++.-.|.....+++..|. +++.+|++++ +.+|+++|+++|++..+++.++-+|+-+..++
T Consensus 199 ~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~--g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt 276 (522)
T TIGR03799 199 FAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDAN--NRIDVDALRDKCAELAEQNIKPLAIVGVAGTT 276 (522)
T ss_pred hhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCC--CcCCHHHHHHHHHHHHHCCCCcEEEEEEecCc
Confidence 134688888999999999999987 7889999764 58999999999987655554443344445577
Q ss_pred CcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 018147 282 PTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (360)
Q Consensus 282 PTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~ 315 (360)
.||.+-+ +++|+++|+++|+|+++|.+|+..
T Consensus 277 ~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~ 307 (522)
T TIGR03799 277 ETGNIDP---LDEMADIAQELGCHFHVDAAWGGA 307 (522)
T ss_pred CCCCcCC---HHHHHHHHHHcCCeEEEEchhhhH
Confidence 8999988 999999999999999999999874
No 290
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.08 E-value=7.1e-09 Score=100.83 Aligned_cols=167 Identities=18% Similarity=0.172 Sum_probs=120.2
Q ss_pred CHHHHHHH-HHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCC-----CCCEEEcCChHHHHHHHHHHHcc--
Q 018147 141 SADSIERA-WQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPAD-----PNDIFLTDGASPAVHMMMQLLIR-- 212 (360)
Q Consensus 141 p~~v~~~~-~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~-----~~~I~~t~Ga~~al~~~~~~l~~-- 212 (360)
+..++..+ ...++.. ...|.......++.+.+.+|+.+..|++-+ ...=++|+|+++++..++.+...
T Consensus 52 ~~~i~~~~l~~~~n~n----~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~ 127 (373)
T PF00282_consen 52 PASILADLLASALNQN----GFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERA 127 (373)
T ss_dssp HHHHHHHHHHHHHT-B----TTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccc----ccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHH
Confidence 44454443 3444432 334555556789999999999999997721 23468889999998777655421
Q ss_pred -----CCC-----C-EEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCC
Q 018147 213 -----SEN-----D-GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN 281 (360)
Q Consensus 213 -----~~g-----d-~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~N 281 (360)
..| . .|++.+-.|.....++..+|..++.+|++++ +.+|+++|++++++..++|..+-+|+.+-...
T Consensus 128 ~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~~--~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt 205 (373)
T PF00282_consen 128 LPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDED--GRMDIEALEKALEKDIANGKTPFAVVATAGTT 205 (373)
T ss_dssp HHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBTT--SSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-T
T ss_pred hhhhhhcccccccccccccccccccHHHHhcceeeeEEEEecCCcc--hhhhHHHhhhhhcccccccccceeeeccCCCc
Confidence 012 2 4667777899999999999999999999984 58999999999998777764454566667788
Q ss_pred CcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 018147 282 PTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (360)
Q Consensus 282 PTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~ 316 (360)
.||.+ |++++|+++|+++++|+.+|.+|++..
T Consensus 206 ~~Ga~---D~l~~i~~i~~~~~~wlHVDaA~gg~~ 237 (373)
T PF00282_consen 206 NTGAI---DPLEEIADICEKYNIWLHVDAAYGGSA 237 (373)
T ss_dssp TTSBB----SHHHHHHHHHHCT-EEEEEETTGGGG
T ss_pred ccccc---cCHHHHhhhccccceeeeecccccccc
Confidence 89988 559999999999999999999999933
No 291
>PLN02263 serine decarboxylase
Probab=99.06 E-value=2e-08 Score=99.39 Aligned_cols=142 Identities=8% Similarity=-0.083 Sum_probs=113.1
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCC
Q 018147 168 GIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLVPYYLDE 246 (360)
Q Consensus 168 G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~ 246 (360)
+..++.+.+.+|+.+.+|.+-+.-.=++|+|+|++...++.+... .+...|+++.-.|....++++.+|.+++.+|.++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~ 209 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTLV 209 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccCC
Confidence 468899999999999888642222347899999999887776542 1334788999999999999999999999999875
Q ss_pred CCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCC-----EEEEccCCCCCcc
Q 018147 247 ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGL-----VLLADEVYQENVY 317 (360)
Q Consensus 247 ~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i-----~lI~DeaY~~~~~ 317 (360)
+ +.+|+++|+++|.+.. .++-+|+.+-+..++|.+=+ +++|.++|+++|+ |+.+|.+|++++.
T Consensus 210 ~--g~mD~~aL~~aI~~d~---~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~l 277 (470)
T PLN02263 210 S--GEIDCADFKAKLLANK---DKPAIINVNIGTTVKGAVDD---LDLVIKTLEECGFSQDRFYIHCDGALFGLMM 277 (470)
T ss_pred C--CcCcHHHHHHHHHhCC---CCcEEEEEEecCCCCcCCCC---HHHHHHHHHHcCCccCCeeEEEeccchhhHh
Confidence 4 6899999999997621 12445556677889999866 9999999999997 9999999988654
No 292
>PRK06541 hypothetical protein; Provisional
Probab=99.05 E-value=9.8e-09 Score=102.58 Aligned_cols=212 Identities=17% Similarity=0.139 Sum_probs=123.0
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
...+||+..+ -.--+|.+++++.+.+..........|. .+.+..+|+.+.+... ...+.+++++++++
T Consensus 51 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~-----~~~~~~la~~l~~~~p--~~~~~v~f~~sGse 123 (460)
T PRK06541 51 GKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWSYA-----HPPAIELAERLAALAP--GDLNRVFFTTGGSE 123 (460)
T ss_pred CCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccccC-----CHHHHHHHHHHHHhCC--CCcCEEEEcCCcHH
Confidence 3445555443 2233788999999888764320111222 2334445555554322 22368999999999
Q ss_pred HHHHHHHHHcc-----C--CCCEEEEcCCCchHHHHHHHHc-CC------------eEEEeecCCCC---CcCCC-----
Q 018147 202 AVHMMMQLLIR-----S--ENDGILCPIPQYPLYSASIALH-GG------------TLVPYYLDEAT---GWGLE----- 253 (360)
Q Consensus 202 al~~~~~~l~~-----~--~gd~Vlv~~P~y~~~~~~~~~~-g~------------~~~~v~~~~~~---~~~~d----- 253 (360)
|+..+++.... + ...+|+...-.|.+........ |. .+..+|....- .|+-+
T Consensus 124 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 203 (460)
T PRK06541 124 AVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFG 203 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHH
Confidence 99998886532 1 1367888887777654332221 11 11222211100 01122
Q ss_pred ---HHHHHHHHHHHHhcCCCccEEEEecC-CCCcccCCC-HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHH
Q 018147 254 ---TSEVKKQLEAAKAKGITVRALVVINP-GNPTGQVLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKK 328 (360)
Q Consensus 254 ---~~~L~~~i~~~~~~g~~~k~iil~~P-~NPTG~~~~-~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~ 328 (360)
++.+++.++.. +++..+.+|..| +++.|.+.+ .+.+++|.++|+++|+++|+||+|.+|.-.+. ...+..
T Consensus 204 ~~~~~~l~~~l~~~---~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~--~~a~~~ 278 (460)
T PRK06541 204 RWAADRIEEAIEFE---GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGE--MFGCER 278 (460)
T ss_pred HHHHHHHHHHHHhc---CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCch--hhhhhh
Confidence 24555555421 223456777778 889998865 78899999999999999999999988632221 111110
Q ss_pred HHHhhCCCCCCceEEEEeccCcCccccc-cccC
Q 018147 329 VSRSMGYGEKDISLVSFQSVSKGRYFHF-FSKW 360 (360)
Q Consensus 329 ~~~~~~~~~~~~~~i~~~S~SK~~~g~~-RvGw 360 (360)
.+ -.|| ++ +|||++++|. ++|+
T Consensus 279 --~g---v~PD--iv---t~gK~l~~G~~piga 301 (460)
T PRK06541 279 --FG---YVPD--II---TCAKGITSGYSPLGA 301 (460)
T ss_pred --cC---CCCC--EE---EecccccCCccceeE
Confidence 11 1256 22 5899999986 7774
No 293
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.05 E-value=7.6e-09 Score=106.83 Aligned_cols=153 Identities=16% Similarity=0.194 Sum_probs=109.1
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHH-HHHcCCeEEEeecCCCCCcCC----CHHH-----HHHH
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS-IALHGGTLVPYYLDEATGWGL----ETSE-----VKKQ 260 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~-~~~~g~~~~~v~~~~~~~~~~----d~~~-----L~~~ 260 (360)
.-.++++|+|.++..++.+++. +||.|++...+|-+..+. +.+.|+++++++... +.|++ +.+. ++++
T Consensus 191 ~tyFlvNGTS~gn~a~i~a~~~-~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~-n~~Gi~g~I~~~~~~~~~i~~~ 268 (720)
T PRK13578 191 KTYFVLNGTSASNKVVTNALLT-PGDLVLFDRNNHKSNHHGALIQAGATPVYLETAR-NPFGFIGGIDAHCFDEEYLREQ 268 (720)
T ss_pred ceEEEeCChhHHHHHHHHHhcC-CCCEEEeecccHHHHHHHHHHHcCCeEEEeeccc-cccCCcCCCChHHccHHHHHHH
Confidence 4578899999999999999995 999999999999998884 899999999987654 33543 5544 8888
Q ss_pred HHHH-Hh--cC-CCccEEEEecCCCCcccCCCHHHHHHHHHH-HHHcCCEEEEccCCCCCc-cCCCCCCCCHHHHHHhhC
Q 018147 261 LEAA-KA--KG-ITVRALVVINPGNPTGQVLAEENQRAIVDF-CKKEGLVLLADEVYQENV-YVPEKKFHSFKKVSRSMG 334 (360)
Q Consensus 261 i~~~-~~--~g-~~~k~iil~~P~NPTG~~~~~~~l~~i~~l-a~~~~i~lI~DeaY~~~~-~~~~~~~~s~~~~~~~~~ 334 (360)
|++. .. +. +..|+++|++|+. -|.+++ +++|+++ ++.++ .|++||||.... |.+. ...+....-+++
T Consensus 269 i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~llvDEAhgah~~F~p~--~~~~p~~al~~G 341 (720)
T PRK13578 269 IREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YILFDSAWVGYEQFIPM--MADCSPLLLELN 341 (720)
T ss_pred HHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cEEEeCcchhhhccCcc--cccCChhhhhcC
Confidence 8654 11 11 2258999999986 599998 7888887 57777 999999998742 2221 001111111233
Q ss_pred CCCCCceEEEEeccCcCccc
Q 018147 335 YGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 335 ~~~~~~~~i~~~S~SK~~~g 354 (360)
...| -+++++|.-|.+++
T Consensus 342 aD~p--~i~v~QStHKtL~a 359 (720)
T PRK13578 342 ENDP--GIFVTQSVHKQQAG 359 (720)
T ss_pred CCCC--CeEEEEChhhcchh
Confidence 3223 36899999997653
No 294
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.04 E-value=1e-09 Score=106.16 Aligned_cols=162 Identities=13% Similarity=0.098 Sum_probs=107.9
Q ss_pred ccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCC-------cCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCC-hHHHH
Q 018147 132 DRSETQGLFSADSIERAWQILDQIPGRATGAYSHS-------QGIKGLRDTIAAGIEARDGFPADPNDIFLTDG-ASPAV 203 (360)
Q Consensus 132 ~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~-------~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~G-a~~al 203 (360)
+|+.+|...|+.|++++.+.+.+..+.+...|... .-+.+.|+.+++++ |. -++++|++|+| +|+++
T Consensus 2 ~~~pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~----~~-~~~~~vvf~~gs~T~a~ 76 (355)
T cd00611 2 NFSAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELL----NI-PDNYKVLFLQGGATGQF 76 (355)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHh----CC-CCCceEEEEcCCchHHH
Confidence 46677888899999999887754322123334333 22456677777766 32 24678999988 99999
Q ss_pred HHHHHHHcc--CCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCC-HHHHHHHHHHHHhcCCCccEEEEecCC
Q 018147 204 HMMMQLLIR--SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLE-TSEVKKQLEAAKAKGITVRALVVINPG 280 (360)
Q Consensus 204 ~~~~~~l~~--~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d-~~~L~~~i~~~~~~g~~~k~iil~~P~ 280 (360)
+.++..+.. ++||.|++ .+....+...++..|.+++.++.++++.|. + ++..+..+++ ++++|.+++-.
T Consensus 77 ~~~~~~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~-~~~~~~~~~~~~------~~~lV~~~h~~ 148 (355)
T cd00611 77 AAVPLNLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKYT-KIPDVETWDLAP------DAAYVHYCSNE 148 (355)
T ss_pred HHHHHhcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCCC-CCCCHhhcCCCC------CCCEEEEeCCc
Confidence 999999974 24454443 233233444778889999998876443331 2 2222222333 79999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 281 NPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 281 NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
|.||..++ ++++.+|+++++|.+..-
T Consensus 149 t~tG~~~~--------~i~~~~g~~~~VDa~qs~ 174 (355)
T cd00611 149 TIHGVEFD--------EVPDTGGVPLVADMSSNI 174 (355)
T ss_pred ccccEEcc--------eecccCCCeEEEEccccc
Confidence 99999743 344559999999998775
No 295
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=98.99 E-value=3.3e-08 Score=98.44 Aligned_cols=215 Identities=13% Similarity=0.068 Sum_probs=120.9
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
...+||+..+ -.--+|.+++++.+.+...... ...+. ..+....+++.+.+.... ...+.|++++++++
T Consensus 41 G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~-~~~~~----~~~~~~~lae~L~~~~p~-~~~~~v~f~~SGse 114 (445)
T PRK08593 41 GKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHY-TPAYM----YHEPLVRLAKKLCELAPG-DFEKRVTFGLSGSD 114 (445)
T ss_pred CCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCc-ccccc----CCHHHHHHHHHHHHhCCC-CCCCEEEECCchHH
Confidence 4455666443 2234788999999888764320 11111 123444556666554321 11257999999999
Q ss_pred HHHHHHHHHccC-CCCEEEEcCCCchHHHHHH-HHcCC-------------eEEEeecCCC--CCcC-CCH-------HH
Q 018147 202 AVHMMMQLLIRS-ENDGILCPIPQYPLYSASI-ALHGG-------------TLVPYYLDEA--TGWG-LET-------SE 256 (360)
Q Consensus 202 al~~~~~~l~~~-~gd~Vlv~~P~y~~~~~~~-~~~g~-------------~~~~v~~~~~--~~~~-~d~-------~~ 256 (360)
|+..+++....- ....|+...-.|.+..... ...+. .+..+|.... ..+. .+. ++
T Consensus 115 A~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 194 (445)
T PRK08593 115 ANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAP 194 (445)
T ss_pred HHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHH
Confidence 999999864321 2356787777777654322 22221 1222322111 0011 111 23
Q ss_pred HHHHHHHHHhcCCCccEEEEecCCCCcccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCC
Q 018147 257 VKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P~NPTG~~-~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~ 335 (360)
+++.+.... ...++.+|++.-.....|.+ .+.+.+++|.++|++||+++|+||+|.+|...+. ...+.. . .
T Consensus 195 ~~~~~~~~~-~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~--~~a~~~----~-g 266 (445)
T PRK08593 195 LKEMFEKYL-PADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGK--WSSISH----F-N 266 (445)
T ss_pred HHHHHHhhc-CCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCch--HHHHHh----c-C
Confidence 333332110 01246555555446666776 6788899999999999999999999998644432 111111 1 1
Q ss_pred CCCCceEEEEeccCcCccccccccC
Q 018147 336 GEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 336 ~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
-.|| +-++||++++|+++||
T Consensus 267 v~pD-----i~t~gK~l~~G~p~ga 286 (445)
T PRK08593 267 ITPD-----LMSFGKSLAGGMPMSA 286 (445)
T ss_pred CCCC-----EeeecccccCCcccEE
Confidence 1256 3378999999998885
No 296
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.95 E-value=5.8e-08 Score=96.42 Aligned_cols=213 Identities=15% Similarity=0.096 Sum_probs=124.5
Q ss_pred CCCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 018147 126 DHPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (360)
Q Consensus 126 ~~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~ 200 (360)
+...+||+..+ -.--+|.+++++.+.+..... ...|.. .+.+..+|+.+.+... -..+.++++++++
T Consensus 73 dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~--~~~~~~----~~~~~~lAe~L~~~~p--~~~~~v~f~~SGs 144 (442)
T TIGR03372 73 QGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPL--HSQELL----DPLRALLAKTLAALTP--GKLKYSFFCNSGT 144 (442)
T ss_pred CCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCC--cccccC----CHHHHHHHHHHHHhCC--CCcCEEEEeCCch
Confidence 34556776554 334578899999998877542 223332 2344555555554322 1225789999999
Q ss_pred HHHHHHHHHHccC----CCCEEEEcCCCchHHHHHHHHcCCeEE----EeecCCCCC--cCCCHHHHHHHHHHHHhcCCC
Q 018147 201 PAVHMMMQLLIRS----ENDGILCPIPQYPLYSASIALHGGTLV----PYYLDEATG--WGLETSEVKKQLEAAKAKGIT 270 (360)
Q Consensus 201 ~al~~~~~~l~~~----~gd~Vlv~~P~y~~~~~~~~~~g~~~~----~v~~~~~~~--~~~d~~~L~~~i~~~~~~g~~ 270 (360)
+|...+++....- ....|+...-.|.+..........+.. ..|+.+.-. --.|.+.+++.++.....+.+
T Consensus 145 EA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~ 224 (442)
T TIGR03372 145 ESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDD 224 (442)
T ss_pred HHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCc
Confidence 9999998865321 235788888888766543333221110 111111000 012677888777543222334
Q ss_pred ccEEEEecC-CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEecc
Q 018147 271 VRALVVINP-GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV 348 (360)
Q Consensus 271 ~k~iil~~P-~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~ 348 (360)
+.+|+ ..| ..--|.+. +++-++++.++|++||+++|+||++.+|.-.+. ...+... + -.|| | -++
T Consensus 225 vAavI-vEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~--~~a~e~~--g---v~PD---i--vt~ 291 (442)
T TIGR03372 225 VAAII-LEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGK--MFACEHE--G---VQPD---I--LCL 291 (442)
T ss_pred EEEEE-EeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcccc--chhhhhc--C---CCCC---e--eee
Confidence 54555 445 44456655 567799999999999999999999988533332 2221111 1 1266 2 248
Q ss_pred CcCcccc-cccc
Q 018147 349 SKGRYFH-FFSK 359 (360)
Q Consensus 349 SK~~~g~-~RvG 359 (360)
+|++++| .-+|
T Consensus 292 gK~lg~G~~Pig 303 (442)
T TIGR03372 292 AKALGGGVMPIG 303 (442)
T ss_pred hhhhcCCcccce
Confidence 9999888 3443
No 297
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.94 E-value=2.1e-08 Score=103.45 Aligned_cols=150 Identities=13% Similarity=0.078 Sum_probs=107.8
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCC----C-----HHHHHHHH
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGL----E-----TSEVKKQL 261 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~----d-----~~~L~~~i 261 (360)
...++++|+|.++..++.+++. +||.|++...+|-+..+.+.+.|+++++++... +.|++ + .+.+++++
T Consensus 212 ~tyfvvNGTS~~n~av~~a~~~-~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~r-n~~Gi~g~I~~~~~~~e~i~~~i 289 (714)
T PRK15400 212 RSYMVTNGTSTANKIVGMYSAP-AGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTR-NAYGILGGIPQSEFQHATIAKRV 289 (714)
T ss_pred cEEEEeCchHHHHHHHHHHhcC-CCCEEEeecccHHHHHHHHHHcCCeEEEecccc-cccCCccCCCccccCHHHHHHHH
Confidence 4578899999999999999994 999999999999999999999999999987554 34443 4 78888888
Q ss_pred HHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc-cCCCCCCCCHHHHHHhhCCCCCCc
Q 018147 262 EAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV-YVPEKKFHSFKKVSRSMGYGEKDI 340 (360)
Q Consensus 262 ~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~-~~~~~~~~s~~~~~~~~~~~~~~~ 340 (360)
++... .+++++++|++|+. -|.+++ +++|+++|..++ |++||||.... |.+.-+..+.. . .+...++
T Consensus 290 ~~~p~-ak~p~~~vit~pTY-dG~~yd---~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sam---~-~ga~~~~- 357 (714)
T PRK15400 290 KETPN-ATWPVHAVITNSTY-DGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGM---S-GGRVEGK- 357 (714)
T ss_pred HhCcc-ccCccEEEEECCCC-ccEecC---HHHHHHHhCCCC--EEEEccchhhhccCcccCCcChh---h-cCCCCCC-
Confidence 65321 11334789999965 699998 778888887777 68999998742 32210111111 1 1111113
Q ss_pred eEEEEeccCcCccc
Q 018147 341 SLVSFQSVSKGRYF 354 (360)
Q Consensus 341 ~~i~~~S~SK~~~g 354 (360)
-+++++|.-|.+++
T Consensus 358 ~i~vtQStHKtL~a 371 (714)
T PRK15400 358 VIYETQSTHKLLAA 371 (714)
T ss_pred ceEEEEchhhcccc
Confidence 36899999997654
No 298
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.93 E-value=6.7e-08 Score=94.79 Aligned_cols=215 Identities=15% Similarity=0.157 Sum_probs=130.3
Q ss_pred CCCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCC-CCCCEEEcCCh
Q 018147 126 DHPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPA-DPNDIFLTDGA 199 (360)
Q Consensus 126 ~~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~-~~~~I~~t~Ga 199 (360)
+...+||+.++ -.--+|.+++++.+.+..... ....|... +...++|+.+.+.. +- ..+.+++++++
T Consensus 54 dG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h-~~~~~~~~----e~~v~~ae~L~~~~--p~~~~~~~~f~~sG 126 (447)
T COG0160 54 DGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNH-THTRDLYY----EPYVELAEKLTALA--PGSGLKKVFFGNSG 126 (447)
T ss_pred CCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhc-ccCCcccc----hhHHHHHHHHHHhC--CcccCCeEEecCCc
Confidence 45667787764 445699999999998887542 12333332 33444444444422 22 35679999999
Q ss_pred HHHHHHHHHHHcc-CCCCEEEEcCCCchHHHHHH-HHcC-------------CeEEEeecC--CCCCcCCC--------H
Q 018147 200 SPAVHMMMQLLIR-SENDGILCPIPQYPLYSASI-ALHG-------------GTLVPYYLD--EATGWGLE--------T 254 (360)
Q Consensus 200 ~~al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~-~~~g-------------~~~~~v~~~--~~~~~~~d--------~ 254 (360)
++|+..+++.... .....|+...-.|.+..... ..-| ..+..+|.. ..+.|..+ .
T Consensus 127 aeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~ 206 (447)
T COG0160 127 AEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDAL 206 (447)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHH
Confidence 9999999987532 13467888887777543322 2211 113333332 22222222 2
Q ss_pred HHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCH-HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhh
Q 018147 255 SEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE-ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSM 333 (360)
Q Consensus 255 ~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~-~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~ 333 (360)
+.++..+........++.++++---+.-.|.+.+. +-++++.++|++||+++|+||+..++.-.+. +..+... +
T Consensus 207 ~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~--~fa~E~~--g- 281 (447)
T COG0160 207 EYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGK--MFAFEHF--G- 281 (447)
T ss_pred HHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc--chhhhhc--C-
Confidence 33444343332223345455544447777776654 5699999999999999999999999776663 5554432 1
Q ss_pred CCCCCCceEEEEeccCcCcccccccc
Q 018147 334 GYGEKDISLVSFQSVSKGRYFHFFSK 359 (360)
Q Consensus 334 ~~~~~~~~~i~~~S~SK~~~g~~RvG 359 (360)
-.|| +=++||++++|+-+|
T Consensus 282 --v~PD-----ivt~aK~ig~G~Pl~ 300 (447)
T COG0160 282 --VEPD-----IVTLAKSLGGGLPLS 300 (447)
T ss_pred --CCCC-----EEEecccccCCCcee
Confidence 1367 456899999987554
No 299
>PLN02724 Molybdenum cofactor sulfurase
Probab=98.93 E-value=6.2e-08 Score=103.25 Aligned_cols=140 Identities=14% Similarity=0.140 Sum_probs=93.1
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCC--CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHH---HHHHcCCeEEEee
Q 018147 169 IKGLRDTIAAGIEARDGFPADPN--DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYY 243 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~--~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~---~~~~~g~~~~~v~ 243 (360)
+.+.|+.+|+++ +++++ +|++|+|+|+|+++++..+...+||+|++..-.|+.... .++..|+++..++
T Consensus 80 ~e~aR~~ia~~l------ga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~ 153 (805)
T PLN02724 80 IESARQQVLEYF------NAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVD 153 (805)
T ss_pred HHHHHHHHHHHh------CCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEecc
Confidence 567778888877 34454 589999999999999998843589999998877765443 3445699999988
Q ss_pred cCCCC------CcCCCH--HHHHHHHHH----HHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHc-----CCEE
Q 018147 244 LDEAT------GWGLET--SEVKKQLEA----AKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE-----GLVL 306 (360)
Q Consensus 244 ~~~~~------~~~~d~--~~L~~~i~~----~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~-----~i~l 306 (360)
++.+. .-.++. +.|++.++. ....+.++++|.+++-+|-||.++|.+.+.++.+.++++ ++++
T Consensus 154 ~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v 233 (805)
T PLN02724 154 IEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMV 233 (805)
T ss_pred chhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEE
Confidence 76211 112332 556655421 001123578999999999999999955433333322222 3579
Q ss_pred EEccCCCC
Q 018147 307 LADEVYQE 314 (360)
Q Consensus 307 I~DeaY~~ 314 (360)
++|.+..-
T Consensus 234 ~vDaaQ~~ 241 (805)
T PLN02724 234 LLDAAKGC 241 (805)
T ss_pred Eeehhhhc
Confidence 99988654
No 300
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.89 E-value=4.8e-08 Score=100.87 Aligned_cols=149 Identities=11% Similarity=0.021 Sum_probs=105.9
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcC----CCH-----HHHHHHH
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWG----LET-----SEVKKQL 261 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~----~d~-----~~L~~~i 261 (360)
.-.++++|+|.++..++.+++. +||.|++...+|-+..+.+.+.|+++++++... +.|+ ++. +.+++++
T Consensus 212 ~tyfvvNGTS~~n~av~~a~~~-~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~-n~~Gi~g~I~~~~~~~e~I~~~i 289 (713)
T PRK15399 212 QSYIVTNGTSTSNKIVGMYAAP-AGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTR-NALGILGGIPRREFTRDSIEEKV 289 (713)
T ss_pred cEEEEeCChHHHHHHHHHHhcC-CCCEEEeecccHHHHHHHHHHcCCeeEEecccc-cccCCcCCCChhhccHHHHHHHH
Confidence 4578899999999999999995 999999999999999999999999999987543 2344 345 8888888
Q ss_pred HHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEE-EEccCCCCCc-cCCCCCCCCHHHHHHhhCCCCCC
Q 018147 262 EAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL-LADEVYQENV-YVPEKKFHSFKKVSRSMGYGEKD 339 (360)
Q Consensus 262 ~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~l-I~DeaY~~~~-~~~~~~~~s~~~~~~~~~~~~~~ 339 (360)
++... .+++++++|++|+. -|.+++ +++|++.| |+.+ ++||||.... |.+.-+..+... .. ..+|
T Consensus 290 ~~~p~-~~~p~~vvit~pTY-dGi~yd---~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~sam~---~~--~~aD 356 (713)
T PRK15399 290 AATTQ-AQWPVHAVITNSTY-DGLLYN---TDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKSGMS---GE--RVPG 356 (713)
T ss_pred HhCCC-cCCceEEEEECCCC-CceeeC---HHHHHHHh---CCCEEEEeccchhhhhcCcccCCcChhh---CC--CCCC
Confidence 75321 12457899999965 699998 67777777 5655 6999998732 222101111111 10 0135
Q ss_pred ceEEEEeccCcCccc
Q 018147 340 ISLVSFQSVSKGRYF 354 (360)
Q Consensus 340 ~~~i~~~S~SK~~~g 354 (360)
.-+++++|.-|.+++
T Consensus 357 ~~i~~tQStHKtL~a 371 (713)
T PRK15399 357 KVIFETQSTHKMLAA 371 (713)
T ss_pred eeeeeeeehhccccc
Confidence 446779999997654
No 301
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=98.89 E-value=9.8e-08 Score=95.65 Aligned_cols=188 Identities=14% Similarity=0.071 Sum_probs=109.5
Q ss_pred CCHHHHHHHHHHHHcCCCCC---CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEE---cCChHHHHHHHHHHHccC
Q 018147 140 FSADSIERAWQILDQIPGRA---TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL---TDGASPAVHMMMQLLIRS 213 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~---t~Ga~~al~~~~~~l~~~ 213 (360)
.++.+++++...+.+....+ ..-|+-..-+.++.+...+...+.++ ...+.+++ ..+++.|...++.+|++
T Consensus 46 ~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~--~~~~~~~~nv~~~SG~~AN~av~~aL~~- 122 (475)
T PLN03226 46 TSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFR--LDPEKWGVNVQPLSGSPANFAVYTALLQ- 122 (475)
T ss_pred CCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhC--CCcceeEEecCcCchHHHHHHHHHHhCC-
Confidence 47778888877773322111 12233233333443322233333343 33444433 25567788888888885
Q ss_pred CCCEEEEcCC---CchHHHHHHH---HcCCe----EEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCc
Q 018147 214 ENDGILCPIP---QYPLYSASIA---LHGGT----LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT 283 (360)
Q Consensus 214 ~gd~Vlv~~P---~y~~~~~~~~---~~g~~----~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPT 283 (360)
|||+|+..+. .|..+..... ..+.. ++.+.++.+ +..+|+++|++.+.+. ++++|++. .++ +
T Consensus 123 pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~-~g~iD~d~Le~~l~~~-----~pklIv~~-~S~-~ 194 (475)
T PLN03226 123 PHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDES-TGLIDYDKLEKKAMLF-----RPKLIIAG-ASA-Y 194 (475)
T ss_pred CCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCC-CCCcCHHHHHHHHhhc-----CCeEEEEe-cCc-C
Confidence 9999998552 3333222211 11222 124444543 3479999999998753 67766553 333 6
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc
Q 018147 284 GQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY 353 (360)
Q Consensus 284 G~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 353 (360)
|...+ +++|.++|+++|.++++|+++.--+..... ..+.. . +-| +++.|++|++.
T Consensus 195 s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~-~~~p~---~-----~~D---iv~~t~hK~L~ 249 (475)
T PLN03226 195 PRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQE-AASPF---E-----YCD---VVTTTTHKSLR 249 (475)
T ss_pred CCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCC-CCCCC---C-----CCe---EEEecCccccc
Confidence 67776 778999999999999999998775554321 11110 1 123 77899999884
No 302
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.88 E-value=1.1e-07 Score=95.07 Aligned_cols=212 Identities=15% Similarity=0.109 Sum_probs=124.1
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
...++|+..+ -.--+|++++++.+.+..... ...|.. .+.+..+|+.+.+... -..+.+++++++++
T Consensus 81 G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~--~~~~~~----~~~~~~lae~L~~~~p--~~~~~v~f~~SGsE 152 (459)
T PRK11522 81 GQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPL--HSQELL----DPLRAMLAKTLAALTP--GKLKYSFFCNSGTE 152 (459)
T ss_pred CCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcc--cccccC----CHHHHHHHHHHHHhCC--CCCCEEEEeCCchH
Confidence 4556776555 334478899999998876532 222222 3344555665554322 22368999999999
Q ss_pred HHHHHHHHHccC---C-CCEEEEcCCCchHHHHHHHHc-CCeEEE---eecCCCCCc--CCCHHHHHHHHHHHHhcCCCc
Q 018147 202 AVHMMMQLLIRS---E-NDGILCPIPQYPLYSASIALH-GGTLVP---YYLDEATGW--GLETSEVKKQLEAAKAKGITV 271 (360)
Q Consensus 202 al~~~~~~l~~~---~-gd~Vlv~~P~y~~~~~~~~~~-g~~~~~---v~~~~~~~~--~~d~~~L~~~i~~~~~~g~~~ 271 (360)
|+..+++....- . ...|+...-.|.+........ |..... .|+.+.-.+ -.|.+.+++.++.....+.++
T Consensus 153 Ave~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i 232 (459)
T PRK11522 153 SVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDV 232 (459)
T ss_pred HHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcE
Confidence 999998865321 1 236888888887765433322 211111 111111000 126788888886532223345
Q ss_pred cEEEEecC-CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccC
Q 018147 272 RALVVINP-GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS 349 (360)
Q Consensus 272 k~iil~~P-~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~S 349 (360)
.+|+ ..| ..-.|.+. +.+-++++.++|++||+++|+||++.+|.-.+. ...+.. .+ ..|| | -+|+
T Consensus 233 AavI-vEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~--~~a~e~--~g---v~PD---i--vt~g 299 (459)
T PRK11522 233 AAVI-LEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGK--MFACEH--EN---VQPD---I--LCLA 299 (459)
T ss_pred EEEE-EecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccch--hhhhhc--cC---CCCC---E--EEec
Confidence 4444 445 44456654 566799999999999999999999987533332 111111 11 2266 2 2789
Q ss_pred cCcccc-cccc
Q 018147 350 KGRYFH-FFSK 359 (360)
Q Consensus 350 K~~~g~-~RvG 359 (360)
|++++| +-+|
T Consensus 300 K~lggG~~Pig 310 (459)
T PRK11522 300 KALGGGVMPIG 310 (459)
T ss_pred hhhhCCCccce
Confidence 999988 3443
No 303
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.88 E-value=1.5e-07 Score=93.63 Aligned_cols=215 Identities=11% Similarity=0.105 Sum_probs=120.9
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
...+||+..+ -.--+|.+.+++.+.+..........|. .+....+|+.+.+....+ ..+.+++++++++
T Consensus 53 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~-----~~~~~~lAe~L~~~~p~~-~~~~v~f~~SGsE 126 (441)
T PRK05769 53 GNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFY-----YEPAVELAERLVEIAPGG-FEKKVFFTNSGTE 126 (441)
T ss_pred CCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCcccC-----CHHHHHHHHHHHHhCCCC-CCCEEEECCchHH
Confidence 4456676555 2234788999999888764320111121 234556666665543210 1368999999999
Q ss_pred HHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHc-CC-------------eEEEeecCCC--CCcC-CC--------HH
Q 018147 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIALH-GG-------------TLVPYYLDEA--TGWG-LE--------TS 255 (360)
Q Consensus 202 al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~-g~-------------~~~~v~~~~~--~~~~-~d--------~~ 255 (360)
|+..+++.... ....+|+...-.|.+........ |. .+..++.... ..|. -+ ++
T Consensus 127 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (441)
T PRK05769 127 SNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLD 206 (441)
T ss_pred HHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHH
Confidence 99999886532 13467888888887665432222 21 1222222110 0011 11 22
Q ss_pred HHHHHHHHHHhcCCCccEEEEecC-CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhh
Q 018147 256 EVKKQLEAAKAKGITVRALVVINP-GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSM 333 (360)
Q Consensus 256 ~L~~~i~~~~~~g~~~k~iil~~P-~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~ 333 (360)
.+++.+-+....+.++.+ +|..| ..-.|.+. +.+.+++|.++|++||+++|+||++.++...+. ...+..+ ++
T Consensus 207 ~le~~~~~~~~~~~~iaa-vi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~--~~a~~~~--gv 281 (441)
T PRK05769 207 FIEDYLFKKLVPPEEVAA-IIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGK--MFAIEHF--GV 281 (441)
T ss_pred HHHHHHHhhccCCCceEE-EEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc--eehhhcc--CC
Confidence 233322111001124544 44556 44456644 567899999999999999999999998655442 2222111 11
Q ss_pred CCCCCCceEEEEeccCcCccccccccC
Q 018147 334 GYGEKDISLVSFQSVSKGRYFHFFSKW 360 (360)
Q Consensus 334 ~~~~~~~~~i~~~S~SK~~~g~~RvGw 360 (360)
.|| ++ +|||++++|.++|+
T Consensus 282 ---~pD--iv---t~~K~l~~G~p~ga 300 (441)
T PRK05769 282 ---EPD--II---TLAKAIAGGLPLGA 300 (441)
T ss_pred ---CCC--EE---EEcccccCCcccEE
Confidence 256 23 58999999988874
No 304
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=98.88 E-value=3.3e-08 Score=89.96 Aligned_cols=199 Identities=14% Similarity=0.123 Sum_probs=133.8
Q ss_pred CCCccccCcc---CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 018147 127 HPSILDRSET---QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (360)
Q Consensus 127 ~p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al 203 (360)
+..+++|+.| ...-+|+++++..+++.+.+. +...-.-..|.....+.+...+.+.++ .|+.++.+.+-.|.
T Consensus 66 ~k~ilnFcaNnYLGLsshPeii~a~~~aleeyGa-GlssvrfIcGtq~iHk~LE~kiAqfh~----rED~ilypscfdAN 140 (417)
T KOG1359|consen 66 DKKILNFCANNYLGLSSHPEIINAGQKALEEYGA-GLSSVRFICGTQDIHKLLESKIAQFHG----REDTILYPSCFDAN 140 (417)
T ss_pred ccceeeecccccccccCChHHHHHHHHHHHHhCC-CccceeEEecchHHHHHHHHHHHHHhC----CCceEEeccccccc
Confidence 4567888877 556789999999999888643 333333345666666666555555555 46666666677777
Q ss_pred HHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCc
Q 018147 204 HMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT 283 (360)
Q Consensus 204 ~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPT 283 (360)
..++.+++. |.|.|+...-.+....+.++++. .+ -.+|+-.++..+.++.+. +.|+|+-...=.-.
T Consensus 141 ag~feail~-pedAvfSDeLNhASIIdGirLck----ry-------~h~dv~~l~~~l~~a~k~--r~klv~TDg~FSMD 206 (417)
T KOG1359|consen 141 AGAFEAILT-PEDAVFSDELNHASIIDGIRLCK----RY-------RHVDVFDLEHCLISACKM--RLKLVVTDGVFSMD 206 (417)
T ss_pred hHHHHHhcC-hhhhhhccccccchhhhhhHHHh----hh-------ccchhHHHHHHHHHhhhh--eEEEEEecceeccC
Confidence 788888884 99999999888888888777765 11 145677777666543211 45555533333345
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 284 GQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 284 G~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
|-+.| +++|.+++++||.++++||++..+.++... ......+.-| .++ .|+..+++|+++|
T Consensus 207 GdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~tG--rGt~E~~~vm----~~v-diinsTLgKAlGg 267 (417)
T KOG1359|consen 207 GDIAP---LEEISQLAKKYGALLFIDECHATGFFGETG--RGTAEEFGVM----GDV-DIINSTLGKALGG 267 (417)
T ss_pred CCccc---HHHHHHHHHhcCcEEEEeecccceeecCCC--CChHHHhCCC----Ccc-eehhhhhhhhhcC
Confidence 66666 999999999999999999999999887542 2222222222 232 4778999998764
No 305
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=98.86 E-value=2.6e-08 Score=97.19 Aligned_cols=161 Identities=12% Similarity=0.022 Sum_probs=107.0
Q ss_pred CCCccccCccCCCCCHH-HHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcC-ChHHHHH
Q 018147 127 HPSILDRSETQGLFSAD-SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTD-GASPAVH 204 (360)
Q Consensus 127 ~p~~l~~~~~~~~~p~~-v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~-Ga~~al~ 204 (360)
.|..+.|+.+|..+++. +++++.+.+.... .....-..-+.+.|+.+++++ |.+ ++++|+++. ++|.+++
T Consensus 10 ~~~~~~f~~Gp~~~~~~~v~~a~~~~~~~~~---hr~~~f~~~~~~~r~~l~~l~----~~~-~~~~v~~~~gs~T~~~~ 81 (378)
T PRK03080 10 RPADPRFSSGPCKKRPGWQLEALADALLGRS---HRQKPVKALLKRVIEGTRELL----SLP-EGYEVGIVPGSDTGAWE 81 (378)
T ss_pred CCCCCCcCCCCcCCChHHHHHHHHhhhcccC---cCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEEECCchHHHHH
Confidence 35567788888889998 8888765433211 111111223455566666665 421 345788775 8999999
Q ss_pred HHHHHHccCCCCEEEEcCCCchH-HHH-HHHHcCC-eEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCC
Q 018147 205 MMMQLLIRSENDGILCPIPQYPL-YSA-SIALHGG-TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN 281 (360)
Q Consensus 205 ~~~~~l~~~~gd~Vlv~~P~y~~-~~~-~~~~~g~-~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~N 281 (360)
.++..++.++++.|++ .-.|+. +.. +.+.+|. ++..++.+.. ..+|+++++ .++.|.+++-.|
T Consensus 82 ~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~g--~~~d~~~i~-----------~~~~V~~~h~~t 147 (378)
T PRK03080 82 MALWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEADYG--SLPDLSAVD-----------FDRDVVFTWNGT 147 (378)
T ss_pred HHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCCC--CCCCHhhcC-----------CCCCEEEEecCC
Confidence 9999997412455555 445543 333 2356788 8888876543 356766532 245688899999
Q ss_pred CcccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 282 PTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 282 PTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
.||..++ +++|++ +++|+++|+|.+..-
T Consensus 148 ~tG~~~p---i~~I~~--~~~g~~~vVDa~qs~ 175 (378)
T PRK03080 148 TTGVRVP---VARWIG--ADREGLTICDATSAA 175 (378)
T ss_pred ccceecc---chhhcc--ccCCCeEEEeccccc
Confidence 9999999 777777 788999999988765
No 306
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.85 E-value=3.1e-07 Score=93.96 Aligned_cols=166 Identities=16% Similarity=0.172 Sum_probs=120.1
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccC---C--
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS---E-- 214 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~---~-- 214 (360)
.++.++..+...+-+. ....|..+.+...+.+.+.+++.+..|++- ..=.+|+|+|+|...++....+. |
T Consensus 95 ~~paila~~~a~~~N~---n~~~~e~SP~~t~lE~~vi~~la~l~G~~~--~~G~~TsGGT~ANl~aL~~AR~~k~~p~a 169 (608)
T TIGR03811 95 LMPAILAYNYAMLWNG---NNVAYESSPATSQMEEEVGKEFATLMGYKN--GWGHIVADGSLANLEGLWYARNIKSLPFA 169 (608)
T ss_pred CHHHHHHHHHHHHhCC---CCCccccCchHHHHHHHHHHHHHHHhCCCC--CCeEEeCChHHHHHHHHHHHHHhhhccch
Confidence 4455555444433332 244555566778999999999999999753 33446788887776554443210 0
Q ss_pred ----------------------------------------------C------CEEEEcCCCchHHHHHHHHcCC---eE
Q 018147 215 ----------------------------------------------N------DGILCPIPQYPLYSASIALHGG---TL 239 (360)
Q Consensus 215 ----------------------------------------------g------d~Vlv~~P~y~~~~~~~~~~g~---~~ 239 (360)
| -.|+++.-.|..+..++..+|. .+
T Consensus 170 ~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~v 249 (608)
T TIGR03811 170 MKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQV 249 (608)
T ss_pred hhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccE
Confidence 0 0578888889999999999998 58
Q ss_pred EEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHH---HHcCC--EEEEccCCCC
Q 018147 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC---KKEGL--VLLADEVYQE 314 (360)
Q Consensus 240 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la---~~~~i--~lI~DeaY~~ 314 (360)
+.+|++++ +.+|++.|++.|++..++|..+-+|+.+-....+|.+=+ +++|+++| +++|+ |+.+|.||++
T Consensus 250 v~VpvD~~--~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDp---l~eI~~l~~~~~~~gl~~~lHVDAAyGG 324 (608)
T TIGR03811 250 IPVPVDSN--YRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDG---IDKIVALRNKLMKEGIYFYLHVDAAYGG 324 (608)
T ss_pred EEeecCCC--CcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCC---HHHHHHHHHHHHHcCCceeEeeeccccc
Confidence 89998765 699999999999987777766666777777888999977 55555555 77898 6999999999
Q ss_pred C
Q 018147 315 N 315 (360)
Q Consensus 315 ~ 315 (360)
+
T Consensus 325 ~ 325 (608)
T TIGR03811 325 Y 325 (608)
T ss_pred h
Confidence 5
No 307
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=98.84 E-value=1e-07 Score=94.78 Aligned_cols=192 Identities=13% Similarity=0.022 Sum_probs=123.9
Q ss_pred CCCHHHHHHHHHHHHcCCCC---CCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCC-
Q 018147 139 LFSADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE- 214 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~---~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~- 214 (360)
..++.+.+++...+.+.... +...|+....+.++.....+..++.+| .+.-+|-.-+|+ .|...++.+++. |
T Consensus 60 ~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~--a~~anvqp~Sg~-~An~~v~~all~-~~ 135 (493)
T PRK13580 60 YSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFG--AEHAYVQPHSGA-DANLVAFWAILA-HK 135 (493)
T ss_pred cCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhC--CCcccccCCCcH-HHHHHHHHHHhc-cc
Confidence 34677777765544443211 223455566667777777777777776 333456656655 555566677764 4
Q ss_pred ------------------------------CCEEEEcCCCchHHH-----HHHHHcCCeEEEeecCCCCCcCCCHHHHHH
Q 018147 215 ------------------------------NDGILCPIPQYPLYS-----ASIALHGGTLVPYYLDEATGWGLETSEVKK 259 (360)
Q Consensus 215 ------------------------------gd~Vlv~~P~y~~~~-----~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~ 259 (360)
||+|+..++....+. ..+.....+.+.++++.+ +..+|++++++
T Consensus 136 ~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~-~g~iD~d~l~~ 214 (493)
T PRK13580 136 VESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPD-TGLLDYDEIAA 214 (493)
T ss_pred ccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcc-cCccCHHHHHH
Confidence 799998876654331 112222356677777754 34799999999
Q ss_pred HHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCC
Q 018147 260 QLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKD 339 (360)
Q Consensus 260 ~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~ 339 (360)
.+++ +++.|++++.+|- |...+ +++|.++|+++|+++++|+++.--++.+.. ... ...+ + .+-|
T Consensus 215 ~~~~------~~plvii~g~S~~-~~~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg~~-~~~--~~~~-~--~~~D 278 (493)
T PRK13580 215 LARE------FKPLILVAGYSAY-PRRVN---FAKLREIADEVGAVLMVDMAHFAGLVAGKV-FTG--DEDP-V--PHAD 278 (493)
T ss_pred HHhh------cCCEEEEeCcccc-CCCcC---HHHHHHHHHHcCCEEEEECchhhceecccc-chh--hcCC-C--CCCc
Confidence 9988 6778888888776 44667 899999999999999999999886665431 100 0000 0 0123
Q ss_pred ceEEEEeccCcCccc
Q 018147 340 ISLVSFQSVSKGRYF 354 (360)
Q Consensus 340 ~~~i~~~S~SK~~~g 354 (360)
|+++|++|++.|
T Consensus 279 ---~vtgT~hKaL~G 290 (493)
T PRK13580 279 ---IVTTTTHKTLRG 290 (493)
T ss_pred ---EEEeCChhhccC
Confidence 788999998843
No 308
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.81 E-value=5.8e-07 Score=89.83 Aligned_cols=214 Identities=17% Similarity=0.149 Sum_probs=117.9
Q ss_pred CCCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 018147 126 DHPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (360)
Q Consensus 126 ~~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~ 200 (360)
+...+||+..+ -.--+|.+.+++.+.+..... ....|... +....+|+.+.+..+ ...+.++++++++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~-~~~~~~~~----~~~~~lae~L~~~~p--~~~~~v~f~~SGs 123 (457)
T PRK05639 51 DGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQH-SMIGYTHS----ERAIRVAEKLAEISP--IENPKVLFGLSGS 123 (457)
T ss_pred CCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccc-cccCccCC----HHHHHHHHHHHhhCC--CCcCEEEEeCchH
Confidence 34556666554 234478899999888876432 11123222 233445555554322 2236899999999
Q ss_pred HHHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHH-cCC-------------eEEEeecCCC--CCcC----CCHHH---
Q 018147 201 PAVHMMMQLLIR-SENDGILCPIPQYPLYSASIAL-HGG-------------TLVPYYLDEA--TGWG----LETSE--- 256 (360)
Q Consensus 201 ~al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~-~g~-------------~~~~v~~~~~--~~~~----~d~~~--- 256 (360)
+|+..+++.... .....|+.....|.+....... .|. .++.+|.... ..|. -+.++
T Consensus 124 EA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 203 (457)
T PRK05639 124 DAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELIN 203 (457)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHH
Confidence 999999887542 1345788888888765433222 121 1222322210 0011 02332
Q ss_pred -----HHHHHHHHHhcCCCccEEEEecC-CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHH
Q 018147 257 -----VKKQLEAAKAKGITVRALVVINP-GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKV 329 (360)
Q Consensus 257 -----L~~~i~~~~~~g~~~k~iil~~P-~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~ 329 (360)
+++.+........++.+|+ ..| +...|.+. +.+-+++|.++|++||+++|.||++.+|...+. ......
T Consensus 204 ~~~~~le~~l~~~~~~~~~iAAvI-~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~--~~a~~~- 279 (457)
T PRK05639 204 RFLDYLENYVFSHVVPPDEVAALF-AEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGK--WFASEW- 279 (457)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCch--HHHHHh-
Confidence 3332221100122454555 455 44456644 577899999999999999999999998533332 111111
Q ss_pred HHhhCCCCCCceEEEEeccCcCcccccccc
Q 018147 330 SRSMGYGEKDISLVSFQSVSKGRYFHFFSK 359 (360)
Q Consensus 330 ~~~~~~~~~~~~~i~~~S~SK~~~g~~RvG 359 (360)
-+ -.|| +++ |+|++++|.-+|
T Consensus 280 -~g---v~PD--iv~---~gK~l~gG~pi~ 300 (457)
T PRK05639 280 -FE---VKPD--LII---FGKGVASGMGLS 300 (457)
T ss_pred -cC---CCCC--EEE---echhhcCCCcce
Confidence 11 2367 233 899999886544
No 309
>PLN02271 serine hydroxymethyltransferase
Probab=98.79 E-value=2.5e-07 Score=92.74 Aligned_cols=191 Identities=12% Similarity=0.048 Sum_probs=120.5
Q ss_pred CCCHHHHHHHHHHHHcCCCC---CCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCC--CCEEEcCChHHHHHHHHHHHccC
Q 018147 139 LFSADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADP--NDIFLTDGASPAVHMMMQLLIRS 213 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~---~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~--~~I~~t~Ga~~al~~~~~~l~~~ 213 (360)
..++.+++++...+.+.... +...|+-...+.++.....+...+.+|..... -+|-.- +++.|...++.+|++
T Consensus 159 ~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~-SGs~AN~aV~~ALl~- 236 (586)
T PLN02271 159 FVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY-SCTSANFAVYTGLLL- 236 (586)
T ss_pred cCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec-cHHHHHHHHHHHhcC-
Confidence 55777777765544443211 12234444445556555556665656633211 345555 456777788888884
Q ss_pred CCCEEEEcCCCchHHHHH---------HHHcCCeE--EEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCC
Q 018147 214 ENDGILCPIPQYPLYSAS---------IALHGGTL--VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282 (360)
Q Consensus 214 ~gd~Vlv~~P~y~~~~~~---------~~~~g~~~--~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NP 282 (360)
|||+|+..+..+.++... +...|..+ ++|+++++ +..+|++++++..... ++|+|++..-.||
T Consensus 237 PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~-~g~IDyd~lek~a~~~-----rPKLII~g~Sayp 310 (586)
T PLN02271 237 PGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQ-TGYIDYDKLEEKALDF-----RPKILICGGSSYP 310 (586)
T ss_pred CCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccc-cCccCHHHHHHHhhhc-----CCeEEEECchhcc
Confidence 999999988877765432 23345444 44446544 3479999999854432 8999998777777
Q ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 283 TG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
..++ +++|.++|+++|+++++|.++..-...... +++-.. +-| |+..|..|++.|
T Consensus 311 --r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~-~~sP~~--------~aD---vvt~TTHKtLrG 365 (586)
T PLN02271 311 --REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKE-CVNPFD--------YCD---IVTSTTHKSLRG 365 (586)
T ss_pred --CcCC---HHHHHHHHHHcCCEEEEECcccccccccCc-CCCCCc--------CCc---EEEeCCcccCCC
Confidence 5566 888899999999999999999764443321 211111 123 788899998854
No 310
>PRK05965 hypothetical protein; Provisional
Probab=98.79 E-value=3.2e-07 Score=91.80 Aligned_cols=211 Identities=16% Similarity=0.128 Sum_probs=119.8
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCC-CCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGA-YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~-Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~ 200 (360)
...+||+..+ -.--+|++++++.+.+..... ... |.. ..+.+..+|+.+.+... -..+.++++++++
T Consensus 45 G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~--~~~~~~~---~~~~~~~lae~L~~~~p--~~~~~v~f~~sGS 117 (459)
T PRK05965 45 GHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPY--ATGYFHF---GSEPAIRLAAKLAERAP--GSLNHVYFTLGGS 117 (459)
T ss_pred CCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCC--ccccccc---CCHHHHHHHHHHHhhCC--CCcCEEEEeCChh
Confidence 3445665444 123378899999998876432 111 111 12334456666655422 2346899999999
Q ss_pred HHHHHHHHHHcc-----C-C-CCEEEEcCCCchHHHHHH-HHcCC------------eEEEeecC--CCCCcCCCH----
Q 018147 201 PAVHMMMQLLIR-----S-E-NDGILCPIPQYPLYSASI-ALHGG------------TLVPYYLD--EATGWGLET---- 254 (360)
Q Consensus 201 ~al~~~~~~l~~-----~-~-gd~Vlv~~P~y~~~~~~~-~~~g~------------~~~~v~~~--~~~~~~~d~---- 254 (360)
+|+..+++.... + + ..+|+...-.|.+..... ...+. .+..++.. ....+.-|.
T Consensus 118 EAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (459)
T PRK05965 118 DAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAII 197 (459)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHH
Confidence 999999987431 1 2 356888888887664321 11111 01122211 000111232
Q ss_pred ----HHHHHHHHHHHhcCCCccEEEEecCCCCcccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHH
Q 018147 255 ----SEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKV 329 (360)
Q Consensus 255 ----~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~-~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~ 329 (360)
+++++.+... ...++.+|++.-.+...|.+ .+.+-+++|.++|++||+++|.||+..+|...+. ...+..
T Consensus 198 ~~~~~~l~~~i~~~--~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~--~~a~~~- 272 (459)
T PRK05965 198 AASVAALRAKVAEL--GADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGP--LFACEA- 272 (459)
T ss_pred HHHHHHHHHHHHhc--CCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCch--hhhHhh-
Confidence 4566666431 11245555544335555665 4667899999999999999999999999654442 222211
Q ss_pred HHhhCCCCCCceEEEEeccCcCccccc-cc
Q 018147 330 SRSMGYGEKDISLVSFQSVSKGRYFHF-FS 358 (360)
Q Consensus 330 ~~~~~~~~~~~~~i~~~S~SK~~~g~~-Rv 358 (360)
....|| +-.++|+++||. -+
T Consensus 273 ----~gv~PD-----iv~~gKgl~gG~~Pi 293 (459)
T PRK05965 273 ----EGVVPD-----LMTVAKGLTSGYVPM 293 (459)
T ss_pred ----cCCCCC-----eEEechhhccCCcce
Confidence 112377 345689999884 44
No 311
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.77 E-value=5.7e-07 Score=89.92 Aligned_cols=205 Identities=15% Similarity=0.193 Sum_probs=117.1
Q ss_pred CCCccccCcc----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 018147 127 HPSILDRSET----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (360)
Q Consensus 127 ~p~~l~~~~~----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~a 202 (360)
...+||+..+ -.--+|++++++.+.+..... ....|. .+.+..+++.+.+..+ -..+.+++++++++|
T Consensus 71 G~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~-~~~~~~-----~~~~~~lae~L~~~~p--~~~~~v~f~~sGseA 142 (459)
T PRK06082 71 GKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPF-SPRRFT-----NETAIECAEKLTEIAG--GELNRVLFAPGGTSA 142 (459)
T ss_pred CCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCC-ccCccC-----CHHHHHHHHHHHHhCC--CCCCEEEECCCcHHH
Confidence 4456665422 123588899999988876432 111122 2445566666655433 123689999999999
Q ss_pred HHHHHHHHcc-CCCCEEEEcCCCchHHHH-HHHHcCCe------------EEEeecCCC--CCcC-CC------HHHHHH
Q 018147 203 VHMMMQLLIR-SENDGILCPIPQYPLYSA-SIALHGGT------------LVPYYLDEA--TGWG-LE------TSEVKK 259 (360)
Q Consensus 203 l~~~~~~l~~-~~gd~Vlv~~P~y~~~~~-~~~~~g~~------------~~~v~~~~~--~~~~-~d------~~~L~~ 259 (360)
+..+++.... ....+|+...-.|..... .+...|.. +..++.... ..|. .| ++.+++
T Consensus 143 ve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 222 (459)
T PRK06082 143 IGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEY 222 (459)
T ss_pred HHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHH
Confidence 9999887532 123678887777776543 22222211 111221100 0011 01 244555
Q ss_pred HHHHHHhcCCCccEEEEecC-CCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCC
Q 018147 260 QLEAAKAKGITVRALVVINP-GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (360)
Q Consensus 260 ~i~~~~~~g~~~k~iil~~P-~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~ 338 (360)
.++. ..++ +.+|..| .+-.+.+.+.+-+++|.++|++||+++|.||+..+|.-.+. ...+.. -+ -.|
T Consensus 223 ~i~~----~~~v-AavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~--~fa~e~--~g---v~P 290 (459)
T PRK06082 223 VIEK----EGGI-GAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGE--WFTHQA--YG---IEP 290 (459)
T ss_pred HHhc----CCCE-EEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch--hhHhHh--hC---CCC
Confidence 5542 1245 4445555 44334466778899999999999999999999998533332 111111 11 236
Q ss_pred CceEEEEeccCcCccccc
Q 018147 339 DISLVSFQSVSKGRYFHF 356 (360)
Q Consensus 339 ~~~~i~~~S~SK~~~g~~ 356 (360)
| ++ .++|++++|.
T Consensus 291 D--iv---~~gKgl~gG~ 303 (459)
T PRK06082 291 D--IL---CIGKGLGGGL 303 (459)
T ss_pred C--EE---EecccccCCC
Confidence 7 23 3899999884
No 312
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.77 E-value=3.5e-07 Score=91.66 Aligned_cols=205 Identities=15% Similarity=0.085 Sum_probs=124.5
Q ss_pred CCCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 018147 126 DHPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (360)
Q Consensus 126 ~~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~ 200 (360)
+..++||+..+ -.--+|.+.+++.+.+.... .|.. ..+....+|+.+.+... ..+.+.++++++
T Consensus 97 dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~-----~~~~---~~~~~~~lAe~l~~~~p---~~~~v~f~~SGs 165 (474)
T PLN02482 97 DGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGT-----SFGA---PCLLENVLAEMVIDAVP---SVEMVRFVNSGT 165 (474)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHhhCC-----CCCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCChH
Confidence 45667887555 22347889999999887642 1221 12455667777766542 147899999999
Q ss_pred HHHHHHHHHHccC-CCCEEEEcCCCchHHHHHHH-Hc--CCeEE------EeecC--CC---CCcCCCHHHHHHHHHHHH
Q 018147 201 PAVHMMMQLLIRS-ENDGILCPIPQYPLYSASIA-LH--GGTLV------PYYLD--EA---TGWGLETSEVKKQLEAAK 265 (360)
Q Consensus 201 ~al~~~~~~l~~~-~gd~Vlv~~P~y~~~~~~~~-~~--g~~~~------~v~~~--~~---~~~~~d~~~L~~~i~~~~ 265 (360)
+|...+++....- ..++|+...-.|.++...+. .. |.... .++.. ++ -.| -|++.+++.++..
T Consensus 166 EA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~- 243 (474)
T PLN02482 166 EACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDLEAVKKLFEAN- 243 (474)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CChHHHHHHHHhC-
Confidence 9999998875421 34678888888877643211 11 10000 00000 00 001 1688898888642
Q ss_pred hcCCCccEEEEecC-CCCcccCCC-HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEE
Q 018147 266 AKGITVRALVVINP-GNPTGQVLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLV 343 (360)
Q Consensus 266 ~~g~~~k~iil~~P-~NPTG~~~~-~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i 343 (360)
+.++ +.+|..| ..-.|.+.+ .+.+++|.++|++||+++|+||+..++ ..+. .... .. -+ ..||
T Consensus 244 --~~~i-AavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~--~ga~-~~-~g---v~PD---- 308 (474)
T PLN02482 244 --KGEI-AAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAY--GGAQ-EY-FG---ITPD---- 308 (474)
T ss_pred --CCce-EEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCc--chHh-HH-hC---CCCC----
Confidence 1134 4445555 444576655 677999999999999999999999886 3332 1111 11 11 1266
Q ss_pred EEeccCcCcccccccc
Q 018147 344 SFQSVSKGRYFHFFSK 359 (360)
Q Consensus 344 ~~~S~SK~~~g~~RvG 359 (360)
+-+|+|++++|.-+|
T Consensus 309 -i~t~gK~lggG~Pig 323 (474)
T PLN02482 309 -LTTLGKVIGGGLPVG 323 (474)
T ss_pred -EEEecchhhCCCceE
Confidence 247899999886554
No 313
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=98.77 E-value=8.5e-08 Score=87.52 Aligned_cols=143 Identities=15% Similarity=0.188 Sum_probs=106.4
Q ss_pred CCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCch-HHHH--HHHHcCCe
Q 018147 162 AYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP-LYSA--SIALHGGT 238 (360)
Q Consensus 162 ~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~-~~~~--~~~~~g~~ 238 (360)
-|+...-...|.+.+|+.+. ++..+++++|.+..+-.++..+- .+|.+|++-+-.+- .|.. +....|+.
T Consensus 51 VyGeD~tt~rLE~~vA~l~G-------KEAgLFv~SGTmgNllaIm~Hc~-~rg~eii~gd~~HI~~~E~gg~s~l~gv~ 122 (384)
T KOG1368|consen 51 VYGEDPTTNRLEQRVAELFG-------KEAGLFVPSGTMGNLLAIMVHCH-QRGSEIIVGDRAHIHRYEQGGISQLAGVH 122 (384)
T ss_pred cccCCccHHHHHHHHHHHhC-------ccceeeecccccccHHHHHHHhc-CCCceEEeccchheeehhccChhhhccce
Confidence 35554456899999999873 23457888887777655555554 59999999987664 3332 33445777
Q ss_pred EEEeecCCCCCcCCCHHHHHHHHHHHH--hcCCCccEEEEecCCCCcc-cCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 239 LVPYYLDEATGWGLETSEVKKQLEAAK--AKGITVRALVVINPGNPTG-QVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 239 ~~~v~~~~~~~~~~d~~~L~~~i~~~~--~~g~~~k~iil~~P~NPTG-~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
+.++...+++ .+++++++.++.... -.++.+++|.+.|-||-+| .++|.+++++|.+||+++|+-+.+|.+=-.
T Consensus 123 ~~tv~~e~dg--tm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~ 199 (384)
T KOG1368|consen 123 VRTVKNENDG--TMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIF 199 (384)
T ss_pred eEeeeeCCCC--eeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhh
Confidence 7777655543 789999999997422 1235789999999988777 999999999999999999999999987543
No 314
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.76 E-value=8e-09 Score=96.38 Aligned_cols=155 Identities=17% Similarity=0.217 Sum_probs=87.3
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccC-----CCCEEEEcCCCchHHHHHHHHcCCeEEEee
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-----ENDGILCPIPQYPLYSASIALHGGTLVPYY 243 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~-----~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~ 243 (360)
.++|.+.|.++.+...+...+-..|++++|+++.++.++.+|... +--.|+...|+|+.|.............+.
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~ 124 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA 124 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence 467777777766554444344457999999999999999998632 124599999999999987655543333333
Q ss_pred cCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCC
Q 018147 244 LDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKF 323 (360)
Q Consensus 244 ~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~ 323 (360)
-+.. .|. +-+ ....-+=+++.||||.|.+ .+.++ +..+..+|.|-+|..-.|.+-
T Consensus 125 Gda~-~~~-~~~------------~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyTpI--- 179 (363)
T PF04864_consen 125 GDAS-NFK-NSD------------NPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYTPI--- 179 (363)
T ss_dssp EECC-CGT-T-S-------------CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS-----
T ss_pred ccHH-hhc-cCC------------CCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeeccccccc---
Confidence 3322 232 100 0123344788999999986 33344 445567899999998555432
Q ss_pred CCHHHHHHhhCCCCCCceEEEEeccCcCcc-ccccccC
Q 018147 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGRY-FHFFSKW 360 (360)
Q Consensus 324 ~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~-g~~RvGw 360 (360)
..-.+ .| |.+.|+||.=+ +|.|+||
T Consensus 180 ---~~~aD------~D---iMLFT~SK~TGHAGSR~GW 205 (363)
T PF04864_consen 180 ---TAPAD------HD---IMLFTLSKLTGHAGSRFGW 205 (363)
T ss_dssp ----S-B--------S---EEEEEHHHHCS-GGG-EEE
T ss_pred ---CCCCC------Cc---eEEEEEecccCccccccce
Confidence 22111 34 89999999543 5889999
No 315
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.75 E-value=6.3e-07 Score=88.92 Aligned_cols=205 Identities=13% Similarity=0.016 Sum_probs=120.6
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
...+||+..+ -.--+|.+++++.+.+.... ...+. .+.+..+|+.+.+... ..+.+++++++++
T Consensus 52 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~~~~-----~~~~~~la~~l~~~~p---~~~~v~f~~sGse 120 (428)
T PRK12389 52 GNKYIDYLAAYGPIITGHAHPHITKAITEAAENGV---LYGTP-----TELEIEFAKMLKEAIP---SLEKVRFVNSGTE 120 (428)
T ss_pred CCEEEEccccccccccCCCCHHHHHHHHHHHHhCC---ccCCC-----CHHHHHHHHHHHHhCC---CCcEEEEeCCHHH
Confidence 4456665444 22347889999988887642 11221 2334556666655432 2468999999999
Q ss_pred HHHHHHHHHccC-CCCEEEEcCCCchHHHHHHHH-cCCeEEE--------eecC-CCCCc---CCCHHHHHHHHHHHHhc
Q 018147 202 AVHMMMQLLIRS-ENDGILCPIPQYPLYSASIAL-HGGTLVP--------YYLD-EATGW---GLETSEVKKQLEAAKAK 267 (360)
Q Consensus 202 al~~~~~~l~~~-~gd~Vlv~~P~y~~~~~~~~~-~g~~~~~--------v~~~-~~~~~---~~d~~~L~~~i~~~~~~ 267 (360)
|+..+++....- ....|+...-.|.+....+.. .|..... ++.. ..+.. -.|++.+++.++..
T Consensus 121 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~--- 197 (428)
T PRK12389 121 AVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKW--- 197 (428)
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhc---
Confidence 999999865421 346788888778765443222 2211110 0000 00000 12688888888642
Q ss_pred CCCccEEEEecC-CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEE
Q 018147 268 GITVRALVVINP-GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSF 345 (360)
Q Consensus 268 g~~~k~iil~~P-~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~ 345 (360)
+.++.+|+ ..| ..-.|.+. +.+.+++|.++|+++|+++|.||++.+|. .+. . ..... -+ ..|| +
T Consensus 198 ~~~vaavi-~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~R-t~~--~-~a~~~-~g---v~PD-----i 263 (428)
T PRK12389 198 GDEVAAVL-VEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFR-FMY--G-GAQDL-LG---VEPD-----L 263 (428)
T ss_pred CCcEEEEE-EeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccc-cCc--c-hhhHH-hC---CCCC-----e
Confidence 12454444 445 55567655 56789999999999999999999999862 221 1 00011 11 2366 2
Q ss_pred eccCcCcccccccc
Q 018147 346 QSVSKGRYFHFFSK 359 (360)
Q Consensus 346 ~S~SK~~~g~~RvG 359 (360)
-+++|++++|+-+|
T Consensus 264 vt~gK~lggG~Pi~ 277 (428)
T PRK12389 264 TALGKIIGGGLPIG 277 (428)
T ss_pred eeechhhcCCCcee
Confidence 47899999886554
No 316
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.75 E-value=5.4e-07 Score=87.25 Aligned_cols=198 Identities=18% Similarity=0.168 Sum_probs=132.3
Q ss_pred CCCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 018147 126 DHPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (360)
Q Consensus 126 ~~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~ 200 (360)
+...+||+.-+ -.--+|.|.+++.+.+... ..|+.+. ++.-.+|+.+.++.+ ..|.|-+++++|
T Consensus 51 DGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G-----~~fg~Pt---e~Ei~~Aell~~~~p---~~e~vrfvnSGT 119 (432)
T COG0001 51 DGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERG-----LSFGAPT---ELEVELAELLIERVP---SIEKVRFVNSGT 119 (432)
T ss_pred CCCEeeehhccCcccccCCCCHHHHHHHHHHHHhc-----CCCCCCC---HHHHHHHHHHHHhcC---cccEEEEecchh
Confidence 35567776555 2244788999999988873 2455543 455667777777644 348899999999
Q ss_pred HHHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHH-cC--C-----------------eEEEeecCCCCCcCCCHHHHHH
Q 018147 201 PAVHMMMQLLIR-SENDGILCPIPQYPLYSASIAL-HG--G-----------------TLVPYYLDEATGWGLETSEVKK 259 (360)
Q Consensus 201 ~al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~-~g--~-----------------~~~~v~~~~~~~~~~d~~~L~~ 259 (360)
+|...+++.... -.-|.|+...-+|..+.+.+.. .| . ..+.+|.+ |++.+++
T Consensus 120 EAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-------D~~al~~ 192 (432)
T COG0001 120 EATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-------DLEALEE 192 (432)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC-------CHHHHHH
Confidence 999988876521 1458899999888876654433 22 1 11222211 7999999
Q ss_pred HHHHHHhcCCCccEEEEecC--CCCcccCCCH-HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 260 QLEAAKAKGITVRALVVINP--GNPTGQVLAE-ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 260 ~i~~~~~~g~~~k~iil~~P--~NPTG~~~~~-~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
++++. +.++.+ ||..| +| -|.+.+. +.+++|.++|+++|+++|.||+-..|...-. -......+
T Consensus 193 ~~~~~---g~~IAa-VIvEPv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~g-Gaq~~~gi------- 259 (432)
T COG0001 193 AFEEY---GDDIAA-VIVEPVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALG-GAQGYYGV------- 259 (432)
T ss_pred HHHHc---CCcEEE-EEeccccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCc-ccccccCc-------
Confidence 98873 224544 44555 66 4776665 4699999999999999999999998765421 01122111
Q ss_pred CCCceEEEEeccCcCcccccccc
Q 018147 337 EKDISLVSFQSVSKGRYFHFFSK 359 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~g~~RvG 359 (360)
.|| +..|.|..+||+-+|
T Consensus 260 ~PD-----lttlGKiIGGGlP~g 277 (432)
T COG0001 260 EPD-----LTTLGKIIGGGLPIG 277 (432)
T ss_pred Ccc-----hhhhhhhhcCCccee
Confidence 256 678899999988765
No 317
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.74 E-value=2.8e-07 Score=97.80 Aligned_cols=144 Identities=16% Similarity=0.212 Sum_probs=104.5
Q ss_pred CCCCCC---CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHH---HHHHHcc----CCCCEEEEcCCCchHHH
Q 018147 160 TGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHM---MMQLLIR----SENDGILCPIPQYPLYS 229 (360)
Q Consensus 160 ~~~Y~~---~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~---~~~~l~~----~~gd~Vlv~~P~y~~~~ 229 (360)
.+.|.| .+|..++...+..|+.+..|.+ .-. +..+|+.+|-.. +++.... ...+.|+++.-.+....
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd--~~S-l~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP 592 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFD--AIS-LQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP 592 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC--Ccc-cCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH
Confidence 455655 4678888888999999888865 222 223334433332 3333211 12357999998886656
Q ss_pred HHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEc
Q 018147 230 ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (360)
Q Consensus 230 ~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~D 309 (360)
..++..|.+++.++++++ ..+|+++|+++++++ +.++++|++++|+| +|.+-+ ++++|+++|+++|.++++|
T Consensus 593 asa~~~G~~Vv~V~~d~~--G~iDle~L~~~i~~~---~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VD 664 (939)
T TIGR00461 593 ASAAMAGMQVVPVNCDQD--GNIDLVDLKNKAEQH---GDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLD 664 (939)
T ss_pred HHHHHCCCEEEEeccCCC--CCcCHHHHHHHHhhc---CCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEE
Confidence 668889999999998754 389999999999751 23789999999999 787743 4999999999999999999
Q ss_pred cCCCC
Q 018147 310 EVYQE 314 (360)
Q Consensus 310 eaY~~ 314 (360)
.++..
T Consensus 665 gAq~~ 669 (939)
T TIGR00461 665 GANMN 669 (939)
T ss_pred ecChh
Confidence 99844
No 318
>PRK06062 hypothetical protein; Provisional
Probab=98.72 E-value=8.4e-07 Score=88.58 Aligned_cols=208 Identities=17% Similarity=0.226 Sum_probs=119.4
Q ss_pred CCCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 018147 126 DHPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (360)
Q Consensus 126 ~~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~ 200 (360)
+...+||+..+ -.--+|++++++.+.+..... ....| ..+.+..+|+.+.+... -..+.++++++++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~-~~~~~-----~~~~~~~lae~L~~~~p--~~~~~v~f~~SGs 122 (451)
T PRK06062 51 EGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCT-VAPAH-----ANDARSEAARLIAERAP--GDLSKVFFTNGGA 122 (451)
T ss_pred CCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCC-cCCcc-----CCHHHHHHHHHHHHhCC--CCCCEEEEcCChH
Confidence 34556676554 234478899999988876432 11122 23344556666655432 1246899999999
Q ss_pred HHHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHc-CCe-----------EEEeecCC--CCCcC--CC-------HHH
Q 018147 201 PAVHMMMQLLIR-SENDGILCPIPQYPLYSASIALH-GGT-----------LVPYYLDE--ATGWG--LE-------TSE 256 (360)
Q Consensus 201 ~al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~-g~~-----------~~~v~~~~--~~~~~--~d-------~~~ 256 (360)
+|...+++.... ....+|+...-.|.+........ +.. +..++... ...|. -| ++.
T Consensus 123 EAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 202 (451)
T PRK06062 123 DANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAH 202 (451)
T ss_pred HHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHH
Confidence 999999887542 13457888887787654333222 111 11111110 00111 12 456
Q ss_pred HHHHHHHHHhcCCCccEEEEecC-CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhC
Q 018147 257 VKKQLEAAKAKGITVRALVVINP-GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (360)
Q Consensus 257 L~~~i~~~~~~g~~~k~iil~~P-~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~ 334 (360)
+++.++.. ...++.+|+ ..| ..--|.+. +.+-+++|.++|+++|+++|.||++.+|.-.+. ...+.. .+
T Consensus 203 le~~l~~~--~~~~iAavi-iEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~--~~a~~~--~g-- 273 (451)
T PRK06062 203 LERVIELE--GPSTIAAIL-LESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGK--WFAIEH--FG-- 273 (451)
T ss_pred HHHHHHhc--CCCceEEEE-EccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcH--HHHHHh--cC--
Confidence 66666421 112454444 455 43346664 677899999999999999999999998533332 111111 11
Q ss_pred CCCCCceEEEEeccCcCccccc
Q 018147 335 YGEKDISLVSFQSVSKGRYFHF 356 (360)
Q Consensus 335 ~~~~~~~~i~~~S~SK~~~g~~ 356 (360)
-.|| +-+|+|++++|.
T Consensus 274 -v~PD-----i~t~gK~lggG~ 289 (451)
T PRK06062 274 -VVPD-----LITFAKGVNSGY 289 (451)
T ss_pred -CCCC-----eeeechhhhcCC
Confidence 2367 346899999884
No 319
>PRK07482 hypothetical protein; Provisional
Probab=98.72 E-value=7.2e-07 Score=89.31 Aligned_cols=209 Identities=17% Similarity=0.104 Sum_probs=119.3
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
...+||+..+ -.--+|++++++.++++.... ...+. .-..+.+..+|+.+.+... -..+.+++++++++
T Consensus 49 G~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~--~~~~~--~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGSE 122 (461)
T PRK07482 49 GRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAY--YHTYV--GHGTEASITLSKRIIDRAP--AGMSKVYYGLSGSD 122 (461)
T ss_pred CCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCc--ccccc--ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchHH
Confidence 4456666555 223488899999998887431 11110 0123455566666655432 23468999999999
Q ss_pred HHHHHHHHHcc------CC-CCEEEEcCCCchHHHHHHHHcCC-------------eEEEeecCC--CCC-cCC------
Q 018147 202 AVHMMMQLLIR------SE-NDGILCPIPQYPLYSASIALHGG-------------TLVPYYLDE--ATG-WGL------ 252 (360)
Q Consensus 202 al~~~~~~l~~------~~-gd~Vlv~~P~y~~~~~~~~~~g~-------------~~~~v~~~~--~~~-~~~------ 252 (360)
|+..+++.... .+ ..+|+...-.|.+.......... .+..++... ... ++.
T Consensus 123 Ave~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 202 (461)
T PRK07482 123 ANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFS 202 (461)
T ss_pred HHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHH
Confidence 99999987631 11 35688888888765432221111 111111110 000 000
Q ss_pred --CHHHHHHHHHHHHhcCCCccEEEEecC-CCCcccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHH
Q 018147 253 --ETSEVKKQLEAAKAKGITVRALVVINP-GNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKK 328 (360)
Q Consensus 253 --d~~~L~~~i~~~~~~g~~~k~iil~~P-~NPTG~~-~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~ 328 (360)
+++.+++.+... ...++.+| |..| +.-.|.+ .+.+-+++|.++|++||+++|.||+..+|...+. ...+..
T Consensus 203 ~~~~~~l~~~~~~~--~~~~iAAv-i~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~--~~a~~~ 277 (461)
T PRK07482 203 AYCADELEELILAE--GPDTIAAF-IAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGS--MFGSDH 277 (461)
T ss_pred HHHHHHHHHHHHhc--CCCcEEEE-EECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcc--hhhHHh
Confidence 345666666421 11245444 4555 4445666 4677899999999999999999999999644442 212111
Q ss_pred HHHhhCCCCCCceEEEEeccCcCccccc
Q 018147 329 VSRSMGYGEKDISLVSFQSVSKGRYFHF 356 (360)
Q Consensus 329 ~~~~~~~~~~~~~~i~~~S~SK~~~g~~ 356 (360)
.+..|| +-.++|+++||.
T Consensus 278 -----~gv~PD-----iv~~gKgl~gG~ 295 (461)
T PRK07482 278 -----YGIEPD-----LITVAKGLTSAY 295 (461)
T ss_pred -----cCCCCC-----EEEEccccccCc
Confidence 112377 233689998884
No 320
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.72 E-value=3.2e-07 Score=91.53 Aligned_cols=160 Identities=20% Similarity=0.189 Sum_probs=118.9
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCC
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT 248 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~ 248 (360)
+.+..+.+|+.+ | .....++++|.+.++..++.+++. +||.|+++.+++-+....+-..|+.++++....+.
T Consensus 72 i~eAqe~aA~~f----g---Ad~tyFvvNGTS~ank~vi~a~~~-~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np 143 (557)
T COG1982 72 IKEAQELAARVF----G---ADHTYFVVNGTSTANKAVINAVLT-PGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNP 143 (557)
T ss_pred HHHHHHHHHHHh----C---CCceEEEECCccHHHHHHHHhhcC-CCCEEEecCCccHHHHHHHHHcCCceEEecCCCCc
Confidence 445555555554 3 123588999999999999999995 99999999999999999999999999988655443
Q ss_pred Cc----CCCHHHHHHHHHHHHhcCCCc-cEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCC
Q 018147 249 GW----GLETSEVKKQLEAAKAKGITV-RALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKF 323 (360)
Q Consensus 249 ~~----~~d~~~L~~~i~~~~~~g~~~-k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~ 323 (360)
.| +++.+.+++++.++. .. |+++|+||.. -|++++ +++|++++...++|+..|+++.-. ++-....
T Consensus 144 ~~gi~ggI~~~~~~~~l~~~~----~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~-~~~~~~l 214 (557)
T COG1982 144 LYGIIGGIPLETFKEALLAHP----DAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAH-FDFSPML 214 (557)
T ss_pred cccccCCCCHHHHHHHHHhCh----hhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCccc-ccccccC
Confidence 23 468999998886642 34 7899999876 599998 888899999999999999998763 2211111
Q ss_pred CCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 324 ~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
.. .. . ....+++.+|.-|.+++
T Consensus 215 ~~-~~--~------~~~~~~~tqS~HK~l~a 236 (557)
T COG1982 215 PE-SA--L------NGGADFVTQSTHKLLAA 236 (557)
T ss_pred cc-hh--h------hcCceEEEechhhhhhh
Confidence 11 11 1 11247889999997654
No 321
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=98.71 E-value=6.6e-07 Score=82.26 Aligned_cols=162 Identities=14% Similarity=0.134 Sum_probs=114.3
Q ss_pred ccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHc
Q 018147 132 DRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI 211 (360)
Q Consensus 132 ~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~ 211 (360)
-+..+|..+|..+++++.. . ..+|..+. ...+-+.+.+-++..+. ..++.-.++...++.++..++..++
T Consensus 20 L~gPGPsnl~~~V~~A~~~----~----~lgh~sPe-~~qIm~~v~egikyVFk-T~n~~tf~isgsGh~g~E~al~N~l 89 (385)
T KOG2862|consen 20 LLGPGPSNLSGRVQEAMSR----P----SLGHMSPE-FVQIMDEVLEGIKYVFK-TANAQTFVISGSGHSGWEAALVNLL 89 (385)
T ss_pred eecCCCcCCCHHHHHhhcC----C----ccccCCHH-HHHHHHHHHHHHHHHhc-cCCCceEEEecCCcchHHHHHHhhc
Confidence 3455566778777766432 1 33344332 33333333333322222 1233345666667899999999999
Q ss_pred cCCCCEEEEcCC-Cch-HHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCH
Q 018147 212 RSENDGILCPIP-QYP-LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (360)
Q Consensus 212 ~~~gd~Vlv~~P-~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~ 289 (360)
. |||.|++..- .|. .+.+..+.+|+++..++.+... ...++++++++..+ +++++++++-..-||+.-+
T Consensus 90 e-Pgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~--~~~le~i~~~lsqh-----~p~~vfv~hgdsSTgV~q~- 160 (385)
T KOG2862|consen 90 E-PGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQ--AVPLEEITEKLSQH-----KPKAVFVTHGDSSTGVLQD- 160 (385)
T ss_pred C-CCCeEEEEEechHHHHHHHHHHhhCceeeEEecCccc--CccHHHHHHHHHhc-----CCceEEEEecCccccccch-
Confidence 5 9999988774 443 4678899999999999877653 68999999999886 8999999999889998755
Q ss_pred HHHHHHHHHHHHcCCEEEEccCCC
Q 018147 290 ENQRAIVDFCKKEGLVLLADEVYQ 313 (360)
Q Consensus 290 ~~l~~i~~la~~~~i~lI~DeaY~ 313 (360)
-++.+-++|++|+.++++|.+-+
T Consensus 161 -~~~~~g~lc~k~~~lllVD~VaS 183 (385)
T KOG2862|consen 161 -LLAISGELCHKHEALLLVDTVAS 183 (385)
T ss_pred -HHHHHHHHhhcCCeEEEEechhh
Confidence 45666788999999999998864
No 322
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=98.71 E-value=7.8e-07 Score=88.59 Aligned_cols=195 Identities=14% Similarity=0.149 Sum_probs=110.7
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-----C
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-----S 213 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-----~ 213 (360)
--+|.+++++.+.+++... ...+.. ..+....+|+.+.+... -..+.+++++++++|+..+++.... +
T Consensus 62 h~~p~v~~ai~~ql~~l~~--~~~~~~---~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~AlklAr~~~~~~g 134 (442)
T PRK13360 62 HGRPEIVEAVRAQAGELDY--APAFQM---GHPKAFELANRIAEIAP--GGLNHVFFTNSGSESVDTALKIALAYHRARG 134 (442)
T ss_pred CCCHHHHHHHHHHHHhCCC--cccCCc---CCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcC
Confidence 3478899999988876432 111111 12334456666654321 1235899999999999999886431 0
Q ss_pred --CCCEEEEcCCCchHHHHHHH-HcC------------CeEEEeecCC---CCCcCC--------CHHHHHHHHHHHHhc
Q 018147 214 --ENDGILCPIPQYPLYSASIA-LHG------------GTLVPYYLDE---ATGWGL--------ETSEVKKQLEAAKAK 267 (360)
Q Consensus 214 --~gd~Vlv~~P~y~~~~~~~~-~~g------------~~~~~v~~~~---~~~~~~--------d~~~L~~~i~~~~~~ 267 (360)
...+|+...-.|.+...... ..| ..+..+|... ...|.. ..+.|++.+... .
T Consensus 135 ~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~ 212 (442)
T PRK13360 135 EGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH--D 212 (442)
T ss_pred CCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc--C
Confidence 13578888888876543211 111 1112222211 111211 134666666421 1
Q ss_pred CCCccEEEEecC-CCCcccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEE
Q 018147 268 GITVRALVVINP-GNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSF 345 (360)
Q Consensus 268 g~~~k~iil~~P-~NPTG~~-~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~ 345 (360)
..++ +.+|..| ..-.|.+ .+.+-+++|.++|++||+++|+||++.++...+. ...+. . .+ -.|| +
T Consensus 213 ~~~~-aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~--~~a~~-~-~g---v~PD-----i 279 (442)
T PRK13360 213 ASTI-AAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGA--PFAAQ-Y-FG---VTPD-----L 279 (442)
T ss_pred CCcE-EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc--chhhh-h-cC---CCCc-----e
Confidence 1234 4455556 4445665 4567799999999999999999999988643332 21111 1 11 1266 2
Q ss_pred eccCcCcccc
Q 018147 346 QSVSKGRYFH 355 (360)
Q Consensus 346 ~S~SK~~~g~ 355 (360)
-+|||++++|
T Consensus 280 vt~gK~l~gG 289 (442)
T PRK13360 280 LTCAKGLTNG 289 (442)
T ss_pred eeeeeccccC
Confidence 3789999877
No 323
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.71 E-value=7e-07 Score=88.57 Aligned_cols=194 Identities=13% Similarity=0.158 Sum_probs=109.8
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc------
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------ 212 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~------ 212 (360)
.-+|++++++.+.++.........+. .. ....+++.+.+..+ -.-+.+++++++++|+..+++....
T Consensus 61 h~~p~v~~ai~~~~~~~~~~~~~~~~-~~----~~~~la~~l~~~~~--~~~~~v~f~~sGseA~e~AlklAr~~~~~~~ 133 (427)
T TIGR00508 61 YNHPRLNAAAQKQIDKMSHVMFGGFT-HK----PAIELCQKLVKMTP--NALDCVFLADSGSVAVEVALKMALQYWQAKG 133 (427)
T ss_pred CCCHHHHHHHHHHHHhcCCccccccC-CH----HHHHHHHHHHhhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhhC
Confidence 44788999998888764321111111 11 22334444444322 1236899999999999988886542
Q ss_pred CC-CCEEEEcCCCchHHHHHHHHc-CCe-------------EEEeecCCCCCcC-----CCHHHHHHHHHHHHhcCCCcc
Q 018147 213 SE-NDGILCPIPQYPLYSASIALH-GGT-------------LVPYYLDEATGWG-----LETSEVKKQLEAAKAKGITVR 272 (360)
Q Consensus 213 ~~-gd~Vlv~~P~y~~~~~~~~~~-g~~-------------~~~v~~~~~~~~~-----~d~~~L~~~i~~~~~~g~~~k 272 (360)
.+ ..+|+...-.|.+....+... +.. +..++.. ...+. -|++++++.+... +.++.
T Consensus 134 ~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~l~~~l~~~---~~~va 209 (427)
T TIGR00508 134 EKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAP-QNRFDEEWNEEAITPLAKLMELH---SDEIA 209 (427)
T ss_pred CCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCC-CccccchhHHHHHHHHHHHHHhc---CCcEE
Confidence 02 357888888887654322221 211 0111110 00111 1456666666532 12454
Q ss_pred EEEEecC--CCCccc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccC
Q 018147 273 ALVVINP--GNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS 349 (360)
Q Consensus 273 ~iil~~P--~NPTG~-~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~S 349 (360)
.+|..| ++--|. ..+.+.+++|.++|++||+++|+||++.++...+. ...... .++ .|| ++ .++
T Consensus 210 -avivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~--~~~~~~--~~v---~pD--i~---~~g 276 (427)
T TIGR00508 210 -AVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGK--LFACEH--AGV---VPD--IL---CVG 276 (427)
T ss_pred -EEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc--cchhhh--cCC---CCC--EE---Eec
Confidence 444555 444454 44688999999999999999999999988644442 211111 111 256 23 379
Q ss_pred cCccccc
Q 018147 350 KGRYFHF 356 (360)
Q Consensus 350 K~~~g~~ 356 (360)
|+++||+
T Consensus 277 K~l~gG~ 283 (427)
T TIGR00508 277 KALTGGY 283 (427)
T ss_pred hhhhcCc
Confidence 9998885
No 324
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.68 E-value=2.2e-06 Score=85.83 Aligned_cols=216 Identities=14% Similarity=0.072 Sum_probs=118.4
Q ss_pred CCCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCC-CCEEEc-CC
Q 018147 126 DHPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLT-DG 198 (360)
Q Consensus 126 ~~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~I~~t-~G 198 (360)
+...+||+..+ -.--+|.+++++.+.+.+........|. .+.+..+|+.+.+........ +.++++ ++
T Consensus 61 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~-----~~~~~~la~~L~~~~p~~~~~~~~v~f~~~S 135 (464)
T PRK06938 61 EGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLT-----TPVKDQFVQDLFASLPEAFAREAKIQFCGPT 135 (464)
T ss_pred CCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccccccC-----CHHHHHHHHHHHHhCcccccccceEEEeCCC
Confidence 35567776554 2234788999998888653210011121 233444555554432111111 356564 68
Q ss_pred hHHHHHHHHHHHccC-CCCEEEEcCCCchHHHHHHHHc-CC------------eEEEeecCCC--CCcC--------CCH
Q 018147 199 ASPAVHMMMQLLIRS-ENDGILCPIPQYPLYSASIALH-GG------------TLVPYYLDEA--TGWG--------LET 254 (360)
Q Consensus 199 a~~al~~~~~~l~~~-~gd~Vlv~~P~y~~~~~~~~~~-g~------------~~~~v~~~~~--~~~~--------~d~ 254 (360)
+++|+..+++....- ...+|+...-.|.+........ |. .+..++.... ..++ .++
T Consensus 136 GSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 215 (464)
T PRK06938 136 GTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANL 215 (464)
T ss_pred cHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHH
Confidence 899999998875421 3467888887787654332221 10 1222222111 0011 125
Q ss_pred HHHHHHHHHHHhcCCCccEEEEecC-CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHh
Q 018147 255 SEVKKQLEAAKAKGITVRALVVINP-GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRS 332 (360)
Q Consensus 255 ~~L~~~i~~~~~~g~~~k~iil~~P-~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~ 332 (360)
+.+++.+++......++.+| |.-| +.--|.+. +.+-++++.++|+++|+++|.||+..+|.-.+. ...+..
T Consensus 216 ~~l~~~i~~~~~~~~~iAAv-I~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~--~~a~e~---- 288 (464)
T PRK06938 216 HYLENLLDDPESGVVLPAAV-ILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGK--MFAFEH---- 288 (464)
T ss_pred HHHHHHHHhhccCCCceEEE-EEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcH--HHHHHh----
Confidence 66777775421111235444 4556 33346554 578899999999999999999999999643332 111111
Q ss_pred hCCCCCCceEEEEeccCcCcccccccc
Q 018147 333 MGYGEKDISLVSFQSVSKGRYFHFFSK 359 (360)
Q Consensus 333 ~~~~~~~~~~i~~~S~SK~~~g~~RvG 359 (360)
.+-.|| +-.++|+++||+-+|
T Consensus 289 -~gv~PD-----iv~~gKglggG~Pls 309 (464)
T PRK06938 289 -AGIIPD-----VVVLSKAIGGSLPLA 309 (464)
T ss_pred -cCCCCC-----EEEeeccccCCCceE
Confidence 112377 334589998886554
No 325
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.68 E-value=1.8e-06 Score=87.24 Aligned_cols=208 Identities=15% Similarity=0.111 Sum_probs=118.1
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
...+||+..+ -.--+|++++++.+.+..... ...+ ..+..+....+|+.+.+... +.+.+.+++++++++
T Consensus 88 G~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~--~~~~--~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SGsE 162 (504)
T PLN02760 88 GKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPF--YHSF--WNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSGSE 162 (504)
T ss_pred CCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccc--eecc--cccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCChHH
Confidence 4456665553 224478899999998876432 1111 11233455666666655422 122357899999999
Q ss_pred HHHHHHHHHcc------CC-CCEEEEcCCCchHHHH-HHHHcCCe------------EEEeecCCCCCcC----------
Q 018147 202 AVHMMMQLLIR------SE-NDGILCPIPQYPLYSA-SIALHGGT------------LVPYYLDEATGWG---------- 251 (360)
Q Consensus 202 al~~~~~~l~~------~~-gd~Vlv~~P~y~~~~~-~~~~~g~~------------~~~v~~~~~~~~~---------- 251 (360)
|...+++.... .+ ...|+...-.|.+... .+...|.. +..++... .|.
T Consensus 163 A~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~ 240 (504)
T PLN02760 163 ANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPH--YWRFHLPGETEEE 240 (504)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCc--ccccCCCCCcHHH
Confidence 99999987631 12 2578888877776543 22222221 11111110 011
Q ss_pred ---CCHHHHHHHHHHHHhcCCCccEEEEecC-CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCH
Q 018147 252 ---LETSEVKKQLEAAKAKGITVRALVVINP-GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSF 326 (360)
Q Consensus 252 ---~d~~~L~~~i~~~~~~g~~~k~iil~~P-~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~ 326 (360)
...++|++.+... ...++ +.+|..| ..-.|.+. +.+-+++|.++|++||+++|.||++.+|.-.+. ...+
T Consensus 241 ~~~~~~~~le~~l~~~--~~~~i-AAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~--~~a~ 315 (504)
T PLN02760 241 FSTRLADNLENLILKE--GPETI-AAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGT--MFGC 315 (504)
T ss_pred HHHHHHHHHHHHHHhc--CCCce-EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccch--hhHH
Confidence 0123455555321 11134 4455556 44446554 567899999999999999999999988644442 1111
Q ss_pred HHHHHhhCCCCCCceEEEEeccCcCccccc
Q 018147 327 KKVSRSMGYGEKDISLVSFQSVSKGRYFHF 356 (360)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~ 356 (360)
. . .+-.|| +-+|+|++++|.
T Consensus 316 e----~-~gv~PD-----ivtlgK~lggG~ 335 (504)
T PLN02760 316 D----K-YNIKPD-----LVSLAKALSSAY 335 (504)
T ss_pred H----h-cCCCCc-----EEEecccccCCc
Confidence 1 1 112266 467799998873
No 326
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.68 E-value=7.6e-07 Score=88.30 Aligned_cols=193 Identities=15% Similarity=0.159 Sum_probs=110.0
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc------C
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------S 213 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~------~ 213 (360)
-+|.+++++.+.+.+........|. .+.+..+|+.+.+... ...+.+++++++++|+..+++.... .
T Consensus 61 ~~p~v~~ai~~q~~~~~~~~~~~~~-----~~~~~~lae~L~~~~p--~~~~~v~f~~sGseAve~AlklAr~~~~~~g~ 133 (429)
T PRK06173 61 NHPRLNAAATNQLAKMSHIMFGGFT-----HEPAVELAQKLLEILP--PSLNKIFFADSGSVAVEVAMKMALQYQQAKGE 133 (429)
T ss_pred CCHHHHHHHHHHHHhcCCccccccC-----CHHHHHHHHHHHhhCC--CCcCEEEEeCCchHHHHHHHHHHHHHHHHhCC
Confidence 3688999998888775321111122 2233445555544322 2346899999999999999887542 0
Q ss_pred C-CCEEEEcCCCchHHHHH-HHHcCC-------------eEEEeecCCCCCcC-----CCHHHHHHHHHHHHhcCCCccE
Q 018147 214 E-NDGILCPIPQYPLYSAS-IALHGG-------------TLVPYYLDEATGWG-----LETSEVKKQLEAAKAKGITVRA 273 (360)
Q Consensus 214 ~-gd~Vlv~~P~y~~~~~~-~~~~g~-------------~~~~v~~~~~~~~~-----~d~~~L~~~i~~~~~~g~~~k~ 273 (360)
+ ..+|+...-.|.+.... +...|. .+..+|.... .+. -+++.|++.+.. .+.++.+
T Consensus 134 ~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~l~~l~~~i~~---~~~~iAA 209 (429)
T PRK06173 134 VQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSI-KFGEEWNDEAIEPLQDLLEQ---KGDEIAA 209 (429)
T ss_pred CCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCc-ccchhHHHHHHHHHHHHHHh---CCCcEEE
Confidence 2 35688888888764221 111110 0112221100 011 135556666653 1224555
Q ss_pred EEEecC--CCCcccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCc
Q 018147 274 LVVINP--GNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSK 350 (360)
Q Consensus 274 iil~~P--~NPTG~~-~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK 350 (360)
|++ .| +.-.|.. .+.+-+++|.++|++||+++|+||++.++...+. ...+.. .+ ..|| |+ .|+|
T Consensus 210 vi~-EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~--~~a~~~--~g---v~PD---iv--~~gK 276 (429)
T PRK06173 210 LIL-EPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGK--LFALEH--AG---VVPD---IM--CIGK 276 (429)
T ss_pred EEE-cchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCc--chHHHh--cC---CCCC---EE--Eeeh
Confidence 554 45 5555665 5778899999999999999999999987533332 111111 11 1266 23 3899
Q ss_pred Cccccc
Q 018147 351 GRYFHF 356 (360)
Q Consensus 351 ~~~g~~ 356 (360)
+++||.
T Consensus 277 ~l~gG~ 282 (429)
T PRK06173 277 ALTGGY 282 (429)
T ss_pred hhhCCc
Confidence 998884
No 327
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.67 E-value=1.5e-06 Score=87.04 Aligned_cols=208 Identities=13% Similarity=0.142 Sum_probs=118.3
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
...+||+..+ -.--+|.+++++.+.+..........+. .+.+..+|+.+.+... ...+.+++++++++
T Consensus 55 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~-----~~~~~~lae~L~~~~p--~~~~~v~f~~SGse 127 (460)
T PRK06916 55 GNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLA-----NVPSILLAEKLIEVVP--EGLKKVFYSDSGAT 127 (460)
T ss_pred CCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEeCCcHH
Confidence 3445665443 2345888999999888874321111121 2334455555554432 22368999999999
Q ss_pred HHHHHHHHHcc-------CCCCEEEEcCCCchHHHHHHHHc-CC------------eEEEeecCC--CCCcC--------
Q 018147 202 AVHMMMQLLIR-------SENDGILCPIPQYPLYSASIALH-GG------------TLVPYYLDE--ATGWG-------- 251 (360)
Q Consensus 202 al~~~~~~l~~-------~~gd~Vlv~~P~y~~~~~~~~~~-g~------------~~~~v~~~~--~~~~~-------- 251 (360)
|+..+++.... ....+|+...-.|.+....+... |. .+..+|... ...+.
T Consensus 128 Ave~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~ 207 (460)
T PRK06916 128 AVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVK 207 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHH
Confidence 99999886542 12367888888887654332222 21 112222110 00011
Q ss_pred CCHHHHHHHHHHHHhcCCCccEEEEec-CCCCcccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHH
Q 018147 252 LETSEVKKQLEAAKAKGITVRALVVIN-PGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKV 329 (360)
Q Consensus 252 ~d~~~L~~~i~~~~~~g~~~k~iil~~-P~NPTG~~-~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~ 329 (360)
-+++++++.++. .+.++.+|++.- .+.-.|.+ .+.+-+++|.++|+++|+++|.||+..+|...+. ...+..
T Consensus 208 ~~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~--~~a~~~- 281 (460)
T PRK06916 208 KHLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGK--MFACEH- 281 (460)
T ss_pred HHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCch--hhHHHh-
Confidence 124555555542 122565555443 25555765 4778899999999999999999999988643332 111111
Q ss_pred HHhhCCCCCCceEEEEeccCcCccccc
Q 018147 330 SRSMGYGEKDISLVSFQSVSKGRYFHF 356 (360)
Q Consensus 330 ~~~~~~~~~~~~~i~~~S~SK~~~g~~ 356 (360)
..-.|| +-.++|+++||.
T Consensus 282 ----~gv~PD-----iv~~gK~l~gG~ 299 (460)
T PRK06916 282 ----ENVTPD-----IMTAGKGLTGGY 299 (460)
T ss_pred ----cCCCCC-----eeeeehhhhcCc
Confidence 112367 235799998883
No 328
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=98.67 E-value=3.8e-07 Score=88.09 Aligned_cols=179 Identities=11% Similarity=0.027 Sum_probs=119.7
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcH---HHHHHHHHHHHhhcCCCCCCCCEEEcCC-hHHHHHHHHHHHccCCC
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIK---GLRDTIAAGIEARDGFPADPNDIFLTDG-ASPAVHMMMQLLIRSEN 215 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~---~lr~~ia~~l~~~~g~~~~~~~I~~t~G-a~~al~~~~~~l~~~~g 215 (360)
.|..+++++.+.+....+.+...|....-.+ ++-+.+.+.+++.++.+ +..+|+++.| +|.|++.++..++. +|
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~nl~~-~~ 80 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPLNLLA-EG 80 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcCC-CC
Confidence 5888999999888753332344444433334 55555566666655631 2346888776 99999999999985 89
Q ss_pred CEEEEcCCCch--HHHHHHHHcCCeEEEeecCCCCCc--CCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHH
Q 018147 216 DGILCPIPQYP--LYSASIALHGGTLVPYYLDEATGW--GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (360)
Q Consensus 216 d~Vlv~~P~y~--~~~~~~~~~g~~~~~v~~~~~~~~--~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~ 291 (360)
|+|++..-+.. .+...++.+|. +..+..++...| .+++++++. + +++++|.+++-.|.||+..+
T Consensus 81 ~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~v~~th~ETstGv~~~--- 148 (349)
T TIGR01364 81 KVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--S------EDAAYVHYCANETIHGVEFR--- 148 (349)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--C------CCCCEEEEcCCCCcccEecc---
Confidence 99888776554 35677888898 777765533223 356665552 2 27899999999999999765
Q ss_pred HHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 292 l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
++++.+++++++|.+-.--.. ...+.+. . +++.|--|.|++
T Consensus 149 -----~l~~~~~~l~iVDavss~g~~-----~id~~~~-----------d-~~~~ssqK~lgP 189 (349)
T TIGR01364 149 -----ELPDVKNAPLVADMSSNILSR-----PIDVSKF-----------G-LIYAGAQKNIGP 189 (349)
T ss_pred -----eecccCCCeEEEEccccccCc-----cCCHHHc-----------c-EEEEecccccCC
Confidence 556668999999998765211 2222211 2 677777898765
No 329
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.67 E-value=1.5e-06 Score=86.82 Aligned_cols=195 Identities=15% Similarity=0.148 Sum_probs=112.9
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-----C
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-----S 213 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-----~ 213 (360)
--+|.+++++.+.+..........|. .+.+..+|+.+.+..+ ..-+.+++++++++|+..+++.... .
T Consensus 70 h~~p~v~~Ai~~ql~~~~~~~~~~~~-----~~~~~~lAe~L~~~~p--~~~~~v~f~~sGseAve~AlKlA~~~~~~rg 142 (453)
T PRK06943 70 HANPRINAALKDQLDTLEHAMLAGCT-----HEPAIELAERLAALTG--GTLGHAFFASDGASAVEIALKMSFHAWRNRG 142 (453)
T ss_pred CCCHHHHHHHHHHHHhcCCccccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEeCCCHHHHHHHHHHHHHHHHHhC
Confidence 34788999999888764321111122 2344556666655432 1225899999999999999987521 1
Q ss_pred --CCCEEEEcCCCchHHHHHHHH-cCC------------eEEEeecCCC--CCcC--------CCHHHHHHHHHHHHhcC
Q 018147 214 --ENDGILCPIPQYPLYSASIAL-HGG------------TLVPYYLDEA--TGWG--------LETSEVKKQLEAAKAKG 268 (360)
Q Consensus 214 --~gd~Vlv~~P~y~~~~~~~~~-~g~------------~~~~v~~~~~--~~~~--------~d~~~L~~~i~~~~~~g 268 (360)
...+|+...-.|.+....... .|. .+..++.... ..+. -+++++++.+.. .+
T Consensus 143 ~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~ 219 (453)
T PRK06943 143 RGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAE---RA 219 (453)
T ss_pred CCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHh---CC
Confidence 236788888888765422221 110 1112221110 0011 124566666642 12
Q ss_pred CCccEEEEec-CCCCcccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEe
Q 018147 269 ITVRALVVIN-PGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (360)
Q Consensus 269 ~~~k~iil~~-P~NPTG~~-~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~ 346 (360)
.++.+|++.- .+.-.|.+ .+.+-+++|.++|++||+++|.||+..+|-..+. ...+..+ .-.|| +-
T Consensus 220 ~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~--~fa~~~~-----gv~PD-----iv 287 (453)
T PRK06943 220 GKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGT--FFACEQA-----GVWPD-----FL 287 (453)
T ss_pred CceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcc--hhHHHhC-----CCCCC-----eE
Confidence 2565555543 25555664 5677899999999999999999999999644442 2222111 12377 23
Q ss_pred ccCcCcccc
Q 018147 347 SVSKGRYFH 355 (360)
Q Consensus 347 S~SK~~~g~ 355 (360)
.++|+++||
T Consensus 288 t~gKgl~gG 296 (453)
T PRK06943 288 CLSKGISGG 296 (453)
T ss_pred eeehhhccC
Confidence 458998888
No 330
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.66 E-value=9.8e-07 Score=87.46 Aligned_cols=193 Identities=14% Similarity=0.145 Sum_probs=111.0
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc------C
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------S 213 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~------~ 213 (360)
-+|.+++++.+.+.+........+ ..+.+..+|+.+.+..+ ...+.+++++++++|+..+++.... .
T Consensus 60 ~~p~i~~Ai~~q~~~~~~~~~~~~-----~~~~~~~la~~L~~~~p--~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~ 132 (428)
T PRK07986 60 NHPQLNAAMKSQIDAMSHVMFGGI-----THPPAIELCRKLVAMTP--QPLECVFLADSGSVAVEVAMKMALQYWQAKGE 132 (428)
T ss_pred CCHHHHHHHHHHHhhcCCcccccc-----CCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCC
Confidence 368899999888876432011111 12345556666655432 2246899999999999999886542 1
Q ss_pred CCCEEEEcCCCchHHHHHHHHc-CCe-------------EEEeecCCC---CCc-CCCHHHHHHHHHHHHhcCCCccEEE
Q 018147 214 ENDGILCPIPQYPLYSASIALH-GGT-------------LVPYYLDEA---TGW-GLETSEVKKQLEAAKAKGITVRALV 275 (360)
Q Consensus 214 ~gd~Vlv~~P~y~~~~~~~~~~-g~~-------------~~~v~~~~~---~~~-~~d~~~L~~~i~~~~~~g~~~k~ii 275 (360)
...+|+...-+|.+........ +.. +..++.... ..| .-|++++++.++.. +.++.+|+
T Consensus 133 ~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~---~~~iaavi 209 (428)
T PRK07986 133 PRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAH---RHEIAAVI 209 (428)
T ss_pred CCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhC---CCcEEEEE
Confidence 2467888888887643222211 211 111211100 001 12456777777531 22444444
Q ss_pred EecC--CCCcccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCc
Q 018147 276 VINP--GNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGR 352 (360)
Q Consensus 276 l~~P--~NPTG~~-~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~ 352 (360)
..| +.-.|.+ .+.+.+++|.++|+++|+++|+||++.++...+. ...+.. ..-.|| ++ .|+|++
T Consensus 210 -~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~--~fa~~~-----~gv~PD--i~---t~gK~l 276 (428)
T PRK07986 210 -LEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGK--LFACEH-----AGIAPD--IL---CLGKAL 276 (428)
T ss_pred -EechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCC--eeeecc-----cCCCCC--EE---Eechhh
Confidence 444 4444653 4568899999999999999999999988533332 111111 111256 23 489999
Q ss_pred ccc
Q 018147 353 YFH 355 (360)
Q Consensus 353 ~g~ 355 (360)
+||
T Consensus 277 ~gG 279 (428)
T PRK07986 277 TGG 279 (428)
T ss_pred hCC
Confidence 888
No 331
>PRK12403 putative aminotransferase; Provisional
Probab=98.65 E-value=2.5e-06 Score=85.42 Aligned_cols=196 Identities=17% Similarity=0.152 Sum_probs=106.9
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc------C
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------S 213 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~------~ 213 (360)
-+|.+++++.+.++.... ...+ ..+..+....+++.+.+..+ -.-+.+++++++++|+..+++.... .
T Consensus 71 ~hp~v~~A~~~q~~~~~~--~~~~--~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~ 144 (460)
T PRK12403 71 GRKDLAAAAARQMEQLPY--YNMF--FHTTHPAVIELSELLFSLLP--GHYSHAIYTNSGSEANEVLIRTVRRYWQVLGK 144 (460)
T ss_pred CCHHHHHHHHHHHHhCCC--eecc--cccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCC
Confidence 478899999998887432 1111 01223344555555554432 1236899999999999999987641 1
Q ss_pred CCCE-EEEcCCCchHHHH-HHHHcCCe-----------EEEeecCC--CCCcCCC--------HHHHHHHHHHHHhcCCC
Q 018147 214 ENDG-ILCPIPQYPLYSA-SIALHGGT-----------LVPYYLDE--ATGWGLE--------TSEVKKQLEAAKAKGIT 270 (360)
Q Consensus 214 ~gd~-Vlv~~P~y~~~~~-~~~~~g~~-----------~~~v~~~~--~~~~~~d--------~~~L~~~i~~~~~~g~~ 270 (360)
+++. |+...-.|.+... .+...|.. +..+|... ...+.+. .+.+++.+.+. ...+
T Consensus 145 ~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~ 222 (460)
T PRK12403 145 PQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILEL--GAEN 222 (460)
T ss_pred CCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHh--CCCc
Confidence 3333 4454556665432 22222211 11221110 0001111 24454544321 1113
Q ss_pred ccEEEEecC-CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEecc
Q 018147 271 VRALVVINP-GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV 348 (360)
Q Consensus 271 ~k~iil~~P-~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~ 348 (360)
+. .+|..| ..-.|.+. +.+-+++|.++|++||+++|.||+...|.-.+. ...+..+ + -.|| ++ .+
T Consensus 223 ia-avI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~--~~a~e~~--g---v~PD--iv---~~ 289 (460)
T PRK12403 223 VA-GFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGE--WFAHEHF--G---FEPD--TL---SI 289 (460)
T ss_pred eE-EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch--hhhhhhc--C---CCCC--eE---EE
Confidence 43 444556 44446554 567799999999999999999999988643332 1111111 1 1266 23 38
Q ss_pred CcCccccc
Q 018147 349 SKGRYFHF 356 (360)
Q Consensus 349 SK~~~g~~ 356 (360)
+|++++|.
T Consensus 290 gK~lggG~ 297 (460)
T PRK12403 290 AKGLTSGY 297 (460)
T ss_pred cccccccc
Confidence 99999884
No 332
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.64 E-value=1.1e-06 Score=87.33 Aligned_cols=207 Identities=14% Similarity=0.051 Sum_probs=119.1
Q ss_pred CCCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 018147 126 DHPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (360)
Q Consensus 126 ~~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~ 200 (360)
+...+||+..+ -.--+|.+.+++.+.+.... ...+. .+.+..+|+.+.+..+ ...+.++++++++
T Consensus 51 dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~~~~-----~~~~~~la~~L~~~~~--~~~~~v~f~~SGs 120 (433)
T PRK00615 51 LGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGT---SYGLT-----SEQEILFAEELFSYLG--LEDHKIRFVSSGT 120 (433)
T ss_pred CCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCC---CCCCC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCchH
Confidence 34556666544 22447889999988887642 11111 2334555666655432 2236899999999
Q ss_pred HHHHHHHHHHccC-CCCEEEEcCCCchHHHHH----HHHcCCeE----EEe--e-cCCC-CCc-CCCHHHHHHHHHHHHh
Q 018147 201 PAVHMMMQLLIRS-ENDGILCPIPQYPLYSAS----IALHGGTL----VPY--Y-LDEA-TGW-GLETSEVKKQLEAAKA 266 (360)
Q Consensus 201 ~al~~~~~~l~~~-~gd~Vlv~~P~y~~~~~~----~~~~g~~~----~~v--~-~~~~-~~~-~~d~~~L~~~i~~~~~ 266 (360)
+|+..+++....- ....|+...-.|.++... +...+... ..+ + .... ..+ .-|++.+++.+...
T Consensus 121 EA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~-- 198 (433)
T PRK00615 121 EATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSL-- 198 (433)
T ss_pred HHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhc--
Confidence 9999999876421 235688777778775421 11111000 000 0 0000 000 12678888888642
Q ss_pred cCCCccEEEEecC-CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEE
Q 018147 267 KGITVRALVVINP-GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVS 344 (360)
Q Consensus 267 ~g~~~k~iil~~P-~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~ 344 (360)
+.++. .+|..| ..-.|.+. +.+-+++|.++|++||+++|.||++.++ ..+. .... +..+..|| ++
T Consensus 199 -~~~~a-avI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~--~ga~-----~~~gv~PD--i~- 265 (433)
T PRK00615 199 -GHRVA-GVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQ--GGAA-----AIYHVKPD--IT- 265 (433)
T ss_pred -CCceE-EEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccH--hHHH-----HhcCCCCC--eE-
Confidence 12344 445555 33346655 4667999999999999999999999876 3332 1111 11112366 22
Q ss_pred EeccCcCcccccccc
Q 018147 345 FQSVSKGRYFHFFSK 359 (360)
Q Consensus 345 ~~S~SK~~~g~~RvG 359 (360)
.|+|++++|.-+|
T Consensus 266 --~~gK~lggG~p~~ 278 (433)
T PRK00615 266 --VYGKILGGGLPAA 278 (433)
T ss_pred --EEcccccCCccee
Confidence 4899999876444
No 333
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.64 E-value=1.6e-06 Score=85.75 Aligned_cols=193 Identities=14% Similarity=0.120 Sum_probs=109.9
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc------
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------ 212 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~------ 212 (360)
--++.+.+++.+.++.........+. .+....+|+.+.+..+ -.-+.+++++++++|+..+++....
T Consensus 56 h~~p~i~~ai~~q~~~~~~~~~~~~~-----~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA~e~AlklAr~~~~~~g 128 (422)
T PRK05630 56 HGHPRLKAAAHKQIDTMSHVMFGGLT-----HEPAIKLTRKLLNLTD--NGLDHVFYSDSGSVSVEVAIKMALQYSKGQG 128 (422)
T ss_pred CCCHHHHHHHHHHHHhCCCcccCCcC-----CHHHHHHHHHHHhhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcC
Confidence 34788999999888864320011111 2234455665554422 1236899999999999998886431
Q ss_pred CC-CCEEEEcCCCchHHHHHHHHc-CC-------------eEEEeecCCCCCcCCCH-------HHHHHHHHHHHhcCCC
Q 018147 213 SE-NDGILCPIPQYPLYSASIALH-GG-------------TLVPYYLDEATGWGLET-------SEVKKQLEAAKAKGIT 270 (360)
Q Consensus 213 ~~-gd~Vlv~~P~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~~~~d~-------~~L~~~i~~~~~~g~~ 270 (360)
.+ ..+|+...-.|.+....+... +. .+..+|.... ...+. +.+++.+.+ +
T Consensus 129 ~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~------~ 200 (422)
T PRK05630 129 HPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPV--RGSSPQEISEYLRSLELLIDE------T 200 (422)
T ss_pred CCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcc--cCCChHHHHHHHHHHHHHHhh------c
Confidence 02 256888888887643322211 11 1122222211 01122 233333332 5
Q ss_pred ccEEEEecC--CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEec
Q 018147 271 VRALVVINP--GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQS 347 (360)
Q Consensus 271 ~k~iil~~P--~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S 347 (360)
+.+|++. | +.-.|.+. +.+-+++|.++|++||+++|+||++.++...+. ...+ +.....||+ + +
T Consensus 201 iAAvi~E-Pi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~--~~a~-----~~~gv~PDi--~---t 267 (422)
T PRK05630 201 VAAIIIE-PIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGE--LFAT-----LAAGVTPDI--M---C 267 (422)
T ss_pred eEEEEEe-chhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCch--hhHH-----HhcCCCCCe--e---e
Confidence 6555554 4 55567654 567899999999999999999999988633332 1111 111223672 2 7
Q ss_pred cCcCccccc-ccc
Q 018147 348 VSKGRYFHF-FSK 359 (360)
Q Consensus 348 ~SK~~~g~~-RvG 359 (360)
|+|+++||. -+|
T Consensus 268 ~gK~l~gG~~p~~ 280 (422)
T PRK05630 268 VGKALTGGFMSFA 280 (422)
T ss_pred eechhhcCccccc
Confidence 899998873 443
No 334
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.64 E-value=1e-06 Score=84.77 Aligned_cols=196 Identities=17% Similarity=0.160 Sum_probs=114.8
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHc------c-C
Q 018147 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI------R-S 213 (360)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~------~-~ 213 (360)
+|++.+++.+.+..... ........+.+.++++.+.+..+. ..+++++++++++|+..+++... . .
T Consensus 34 ~p~i~~ai~~~~~~~~~-----~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGseAve~Alkla~~~~~~~~~~ 106 (339)
T PF00202_consen 34 HPEIAEAIAEQANKLNY-----VSFSGFTHPEAAELAEKLAELFPG--GLDRVFFANSGSEAVEAALKLARQYHNKRAYT 106 (339)
T ss_dssp -HHHHHHHHHHHHHCSS-----CSTTTSEEHHHHHHHHHHHHHSST--TEEEEEEESSHHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccccchhHHHHhhhccc-----ccccceeccchhhhhhhhhhcccc--ccceeeeccCchHHHHHHHHHhhccccccccc
Confidence 67888998888877432 111222445667777777776531 45689999999999999998766 2 2
Q ss_pred CCCEEEEcCCCchHHHHHHHHc-C------------CeEEEeecCCCCC---cCCCHHHHHHHHHHHHhcCCCccEEEEe
Q 018147 214 ENDGILCPIPQYPLYSASIALH-G------------GTLVPYYLDEATG---WGLETSEVKKQLEAAKAKGITVRALVVI 277 (360)
Q Consensus 214 ~gd~Vlv~~P~y~~~~~~~~~~-g------------~~~~~v~~~~~~~---~~~d~~~L~~~i~~~~~~g~~~k~iil~ 277 (360)
....|+...-.|.+........ + ..+..+|...... +.-..+.+++.+..... .++ +.+|.
T Consensus 107 ~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i-aaviv 183 (339)
T PF00202_consen 107 GRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNA--DEI-AAVIV 183 (339)
T ss_dssp TTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHG--GGE-EEEEE
T ss_pred CCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcC--CcE-EEEEE
Confidence 4468888888887543322221 1 2234555442100 00011223333332211 145 44555
Q ss_pred cC-CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcccc
Q 018147 278 NP-GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFH 355 (360)
Q Consensus 278 ~P-~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~ 355 (360)
.| +.-.|... +.+-+++|.++|+++|+++|.||++.++...+. +..+.. .++ .|| + -+++|++++|
T Consensus 184 EPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~--~~a~~~--~gv---~PD--i---v~~gK~l~gG 251 (339)
T PF00202_consen 184 EPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGK--FFASEH--YGV---DPD--I---VTFGKGLGGG 251 (339)
T ss_dssp ESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSS--SSGHHH--HTS---SSS--E---EEEEGGGGTT
T ss_pred eccccccCccccccchhhehcccccccccceecccccccccccCC--ccceec--ccc---cCc--c---cccccchhhh
Confidence 56 33345444 567899999999999999999999999755553 333322 222 377 2 3446999988
Q ss_pred ccc
Q 018147 356 FFS 358 (360)
Q Consensus 356 ~Rv 358 (360)
.-+
T Consensus 252 ~p~ 254 (339)
T PF00202_consen 252 LPI 254 (339)
T ss_dssp SSE
T ss_pred hhc
Confidence 543
No 335
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.64 E-value=1.9e-06 Score=85.91 Aligned_cols=195 Identities=12% Similarity=0.135 Sum_probs=109.0
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-----C-
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-----S- 213 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-----~- 213 (360)
-+|.+++++.+.+..........+. .+....+|+.+.+... ...+.+++++++++|+..+++.... +
T Consensus 66 ~~p~v~~ai~~ql~~l~~~~~~~~~-----~~~~~~la~~L~~~~p--~~~~~v~f~~sGseAve~AlklAr~~~~~~g~ 138 (445)
T PRK09221 66 GRPEIVEAVARQAATLDYAPAFQMG-----HPLAFELAERLAELAP--GGLDHVFFTNSGSESVDTALKIALAYHRARGQ 138 (445)
T ss_pred CCHHHHHHHHHHHHhccCccccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCC
Confidence 4788999998888764321111121 2233445666654332 1236899999999999999886531 0
Q ss_pred -CCCEEEEcCCCchHHHHHHHHcCC-------------eEEEeecCC---CCCcCC--------CHHHHHHHHHHHHhcC
Q 018147 214 -ENDGILCPIPQYPLYSASIALHGG-------------TLVPYYLDE---ATGWGL--------ETSEVKKQLEAAKAKG 268 (360)
Q Consensus 214 -~gd~Vlv~~P~y~~~~~~~~~~g~-------------~~~~v~~~~---~~~~~~--------d~~~L~~~i~~~~~~g 268 (360)
...+|+...-.|.+........+. .+..+|... ...|.. ..+++++.++.. ..
T Consensus 139 ~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~ 216 (445)
T PRK09221 139 GTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALH--DA 216 (445)
T ss_pred CCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhc--CC
Confidence 135788888888765432221110 112222110 000111 134556655431 01
Q ss_pred CCccEEEEecCCCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEec
Q 018147 269 ITVRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQS 347 (360)
Q Consensus 269 ~~~k~iil~~P~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S 347 (360)
.++.+|++.--..-.|.+. +.+-+++|.++|+++|+++|+||++.+|.-.+. ...+.. . .-.|| +-+
T Consensus 217 ~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~--~~~~~~----~-gv~PD-----i~~ 284 (445)
T PRK09221 217 STIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGA--AFAAER----F-GVTPD-----IIT 284 (445)
T ss_pred CcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCch--hhHHHh----c-CCCCC-----EEE
Confidence 2454444443355567655 466799999999999999999999988543332 111111 1 11256 347
Q ss_pred cCcCcccc
Q 018147 348 VSKGRYFH 355 (360)
Q Consensus 348 ~SK~~~g~ 355 (360)
+||++++|
T Consensus 285 ~gK~l~gG 292 (445)
T PRK09221 285 FAKGLTNG 292 (445)
T ss_pred eccccccC
Confidence 89999877
No 336
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.64 E-value=8.6e-07 Score=95.28 Aligned_cols=137 Identities=16% Similarity=0.216 Sum_probs=101.9
Q ss_pred CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcC-ChHHHHH---HHHHHHccCCCC----EEEEcCCCchHHHHHHHHcCC
Q 018147 166 SQGIKGLRDTIAAGIEARDGFPADPNDIFLTD-GASPAVH---MMMQLLIRSEND----GILCPIPQYPLYSASIALHGG 237 (360)
Q Consensus 166 ~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~-Ga~~al~---~~~~~l~~~~gd----~Vlv~~P~y~~~~~~~~~~g~ 237 (360)
.+|..++...+.+++.+..|. +++.+.. |+++|.. ++++.+...+|| .|+++...|......+...|.
T Consensus 537 ~qG~l~~i~e~q~~l~eltG~----d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~ 612 (954)
T PRK05367 537 AAGYRELIDQLEAWLAEITGY----DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGM 612 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHCC----CCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCC
Confidence 457778888888999888884 3566655 4444432 233333223565 599999999888888899999
Q ss_pred eEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 238 TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 238 ~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
+++.++++.++ .+|+++|++++++. ..++.+|++++|++-.+...+ +++|+++|+++|+++++|.++..
T Consensus 613 ~vv~v~~d~~G--~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e~~---I~eI~~i~h~~G~~v~VDgA~~~ 681 (954)
T PRK05367 613 KVVVVACDENG--NIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFEET---IREICEIVHEHGGQVYLDGANMN 681 (954)
T ss_pred EEEEECCCCCC--CcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeecCC---HHHHHHHHHHcCCEEEEECcChh
Confidence 99999997653 79999999998652 124778888898865333345 99999999999999999999953
No 337
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.63 E-value=3.3e-07 Score=89.06 Aligned_cols=188 Identities=16% Similarity=0.066 Sum_probs=109.0
Q ss_pred CCHHHHHHHHHHHHcCCCC---CCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEE---cCChHHHHHHHHHHHccC
Q 018147 140 FSADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL---TDGASPAVHMMMQLLIRS 213 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~---~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~---t~Ga~~al~~~~~~l~~~ 213 (360)
.++.+.+++...+.+.... +..-|+...-+.++.+...+..++.+| +++++..+ ..+++.|...++.+|++
T Consensus 32 ~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~--~~~~~w~anvqp~SGs~An~av~~aLl~- 108 (399)
T PF00464_consen 32 MSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG--AEPKEWYANVQPHSGSQANLAVYMALLK- 108 (399)
T ss_dssp --HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT---STTTEEEE---SSHHHHHHHHHHHHT--
T ss_pred cCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC--CCcccceEEeecCCchHHHHHHHHHHHh-
Confidence 3555655544433332210 112233334345555555566666666 34443322 34677888899999995
Q ss_pred CCCEEEEcCCCchHHHH---H--H-----HHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCc
Q 018147 214 ENDGILCPIPQYPLYSA---S--I-----ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT 283 (360)
Q Consensus 214 ~gd~Vlv~~P~y~~~~~---~--~-----~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPT 283 (360)
|||+|+..++...++.. . . .....+.+.|+++++ +..+|.+++++.+++. ++|+|++---..|-
T Consensus 109 pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~-----kPklIi~G~S~y~~ 182 (399)
T PF00464_consen 109 PGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD-TGLIDYDELEKLAKEH-----KPKLIICGASSYPR 182 (399)
T ss_dssp TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT-TSSB-HHHHHHHHHHH-------SEEEEE-SSTSS
T ss_pred hcCcEEecChhhcccccccccccccccccccceEEEEeeeeecC-CCeECHHHHHHHHhhc-----CCCEEEECchhccC
Confidence 99999999977765432 1 1 224567889999865 4689999999999887 89999887444332
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEccCCCC-CccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 284 GQVLAEENQRAIVDFCKKEGLVLLADEVYQE-NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 284 G~~~~~~~l~~i~~la~~~~i~lI~DeaY~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
. -+++++.++|.+.|.+++.|.++.. ++-.+. +++.... -| |+..|.-|+|.|
T Consensus 183 --~---~d~~~~reIad~vga~l~~D~sH~~GLIa~g~--~~~P~~~--------AD---vvt~sThKtl~G 236 (399)
T PF00464_consen 183 --P---IDFKRFREIADEVGAYLMADISHIAGLIAGGL--FPNPFPY--------AD---VVTGSTHKTLRG 236 (399)
T ss_dssp --------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTS--S--GCCT--------SS---EEEEESSGGG-S
T ss_pred --c---cCHHHHHHHHHhcCcEEEecccccccceehhe--ecCcccc--------ce---EEEeeccccccc
Confidence 2 3488999999999999999999854 444442 3332221 23 788999999865
No 338
>PRK06917 hypothetical protein; Provisional
Probab=98.63 E-value=2.9e-06 Score=84.59 Aligned_cols=195 Identities=14% Similarity=0.139 Sum_probs=110.3
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc------C
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------S 213 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~------~ 213 (360)
-+|.+.+++.+.+.+........|. .+.+..+|+.+.+... ...+.+++++++++|+..+++.... .
T Consensus 48 ~hp~v~~Ai~~ql~~~~~~~~~~~~-----~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~ 120 (447)
T PRK06917 48 GVKEIADAIKEQAEEVSFVYRSQFT-----SEPAEKLAKKLSDLSP--GDLNWSFFVNSGSEANETAMKIAIQHFQERGI 120 (447)
T ss_pred CCHHHHHHHHHHHhhCcCccccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEeCChHHHHHHHHHHHHHHHHhcCC
Confidence 3888999999888874210011122 2344556666655432 1235799999999999999987621 1
Q ss_pred C-CCEEEEcCCCchHHHHHHHHc-CCe------------EEEeecCCC--CCcCC--------CHHHHHHHHHHHHhcCC
Q 018147 214 E-NDGILCPIPQYPLYSASIALH-GGT------------LVPYYLDEA--TGWGL--------ETSEVKKQLEAAKAKGI 269 (360)
Q Consensus 214 ~-gd~Vlv~~P~y~~~~~~~~~~-g~~------------~~~v~~~~~--~~~~~--------d~~~L~~~i~~~~~~g~ 269 (360)
+ ..+|+...-.|.......... +.. +..++.... ..+.- +++.+++.++.. ...
T Consensus 121 t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~ 198 (447)
T PRK06917 121 QGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERI--GAE 198 (447)
T ss_pred CCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCC
Confidence 2 367888888887655433222 210 111111100 00111 234555555431 011
Q ss_pred CccEEEEecC-C-CCccc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEe
Q 018147 270 TVRALVVINP-G-NPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (360)
Q Consensus 270 ~~k~iil~~P-~-NPTG~-~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~ 346 (360)
++.+|+ ..| . |--|. ..+.+-+++|.++|+++|+++|.||+..+|.-.+. ...+.. -+ -.|| +-
T Consensus 199 ~iAAvi-~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~--~~a~~~--~g---v~PD-----i~ 265 (447)
T PRK06917 199 HIAAFI-AEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGA--MFAMEH--WG---VEPD-----IM 265 (447)
T ss_pred ceEEEE-EeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccc--hhhHHh--cC---CCCC-----EE
Confidence 454444 455 3 33344 45678899999999999999999999998533332 111111 11 2267 34
Q ss_pred ccCcCccccc
Q 018147 347 SVSKGRYFHF 356 (360)
Q Consensus 347 S~SK~~~g~~ 356 (360)
+|+|++++|.
T Consensus 266 ~~gK~l~~G~ 275 (447)
T PRK06917 266 TLGKGLGAGY 275 (447)
T ss_pred EeeehhccCC
Confidence 6799998874
No 339
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.63 E-value=1.5e-06 Score=84.77 Aligned_cols=192 Identities=18% Similarity=0.183 Sum_probs=123.3
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEE
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGIL 219 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vl 219 (360)
+.+..++++.. +.-.|..+.-...|.+.+++.+ | .+.++.|..+..+=.+++..+++.+||+|+
T Consensus 55 pS~~m~aAM~~--------GDD~Y~gdpSv~~Lee~vael~----G----~E~alpthqGRgaE~Il~~~~~~~~g~e~g 118 (467)
T TIGR02617 55 VTQSMQAAMMR--------GDEAYSGSRSYYALAESVKNIF----G----YQYTIPTHQGRGAEQIYIPVLIKKREQEKG 118 (467)
T ss_pred CCHHHHHHHHc--------CCcccccCchHHHHHHHHHHHh----C----CceEEECCCCchHHHHHHHhhccccccccc
Confidence 45555555543 1335877777899999999987 3 345788877788888888888854788777
Q ss_pred EcCC-------C-chHHHHHHHHcCCeEEEeecCC------CC--CcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCC-
Q 018147 220 CPIP-------Q-YPLYSASIALHGGTLVPYYLDE------AT--GWGLETSEVKKQLEAAKAKGITVRALVVINPGNP- 282 (360)
Q Consensus 220 v~~P-------~-y~~~~~~~~~~g~~~~~v~~~~------~~--~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NP- 282 (360)
+..+ . |......+...|+.++.++.++ +. +-.+|+++|+++|++...+ ++-.+...--+|-
T Consensus 119 ~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~--~i~~v~~tlt~N~~ 196 (467)
T TIGR02617 119 LDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPN--NVPYIVATITCNSA 196 (467)
T ss_pred ccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCC--CceeeeeeEEEecC
Confidence 5443 2 2223456777898888764321 11 2268999999999863111 2222222111232
Q ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEccCCCC-Ccc-----CCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc
Q 018147 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQE-NVY-----VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY 353 (360)
Q Consensus 283 TG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~-~~~-----~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 353 (360)
-|+++|.+.++++.++|++||+.++.|.+=-. ..+ +..-.-.|++.+..++.. +-| .+.-|+||.++
T Consensus 197 GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~-~aD---svt~slsKglg 269 (467)
T TIGR02617 197 GGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYK-YAD---MLAMSAKKDAM 269 (467)
T ss_pred CCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhc-cCC---EEEEEcCCCCC
Confidence 58899999999999999999999999974322 111 000124566666655543 334 45679999865
No 340
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=98.62 E-value=4.8e-07 Score=87.75 Aligned_cols=166 Identities=15% Similarity=0.068 Sum_probs=107.1
Q ss_pred cccCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcH---HHHHHHHHHHHhhcCCCCCCCCEEE-cCChHHHHHHH
Q 018147 131 LDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIK---GLRDTIAAGIEARDGFPADPNDIFL-TDGASPAVHMM 206 (360)
Q Consensus 131 l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~---~lr~~ia~~l~~~~g~~~~~~~I~~-t~Ga~~al~~~ 206 (360)
+-++.+|...|+.|++++.+.+.+....+...+....-.+ ++-+.+.+.+++.+|.+ +..+|++ +++++.++..+
T Consensus 5 ~l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgt~~~Ea~ 83 (360)
T PRK05355 5 YNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIP-DNYKVLFLQGGASLQFAMV 83 (360)
T ss_pred eeccCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEcCCchHHHHHH
Confidence 3456667788999999988876432111233332222223 44455555555555531 2335555 46789999999
Q ss_pred HHHHccCCCCEEEEcCCCchH--HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHH-HHHHHHhcCCCccEEEEecCCCCc
Q 018147 207 MQLLIRSENDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKK-QLEAAKAKGITVRALVVINPGNPT 283 (360)
Q Consensus 207 ~~~l~~~~gd~Vlv~~P~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~-~i~~~~~~g~~~k~iil~~P~NPT 283 (360)
+..++. +||++++..-+... +...++.+|.. ..+..++..+ ..+..++++ .+++ ++++|.+++-.|.|
T Consensus 84 ~~nl~~-~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g-~~~~~~~~~~~l~~------~~~~V~~th~eTst 154 (360)
T PRK05355 84 PMNLLG-GGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDG-FTYIPPLDEWQLSD------DAAYVHYTSNETID 154 (360)
T ss_pred HHhcCC-CCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccC-CCCCCChhhccCCC------CCCEEEEccCCCcc
Confidence 999995 89998877765543 45677888865 5555443222 233333433 5544 68999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 284 GQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 284 G~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
|+..+ ++.+| +|+++|+|.+-.-
T Consensus 155 Gv~~~--~i~~i------~g~l~vVDavss~ 177 (360)
T PRK05355 155 GTEFH--ELPDT------GDVPLVADMSSDI 177 (360)
T ss_pred eEecC--ccccc------CCCcEEEEcCccc
Confidence 99984 35555 8999999998765
No 341
>PRK07046 aminotransferase; Validated
Probab=98.61 E-value=2.3e-06 Score=85.51 Aligned_cols=201 Identities=17% Similarity=0.070 Sum_probs=119.3
Q ss_pred CCCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 018147 126 DHPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (360)
Q Consensus 126 ~~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~ 200 (360)
+...+||+..+ -.--+|.+++++.+.+.... ...+ ..+....+|+.+.+..+ .+.+.++++++
T Consensus 73 DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~---~~~~-----~~~~~~~lAe~l~~~~~----~~~v~F~nSGt 140 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGL---TTML-----PSEDAAWVGEELARRFG----LPYWQVATTAT 140 (453)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHHhCC---CCCC-----CCHHHHHHHHHHHHHhC----CCEEEEECCHH
Confidence 45667887544 22346889999999887642 1122 12445556666665432 57899999999
Q ss_pred HHHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHH-H-cCCeEEE------ee--cCCC---CCcCCCHHHHHHHHHHHHh
Q 018147 201 PAVHMMMQLLIR-SENDGILCPIPQYPLYSASIA-L-HGGTLVP------YY--LDEA---TGWGLETSEVKKQLEAAKA 266 (360)
Q Consensus 201 ~al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~-~-~g~~~~~------v~--~~~~---~~~~~d~~~L~~~i~~~~~ 266 (360)
+|...+++.... ...+.|+...-.|.++..... . .+.+... ++ .... -.| -|++.+++.+..
T Consensus 141 EA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~--- 216 (453)
T PRK07046 141 DANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALAD--- 216 (453)
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCC---
Confidence 999999887542 134678888888877643211 1 1111000 00 0000 011 178888888742
Q ss_pred cCCCccEEEEecC-CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEE
Q 018147 267 KGITVRALVVINP-GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVS 344 (360)
Q Consensus 267 ~g~~~k~iil~~P-~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~ 344 (360)
.++.+ +|..| +.-.|.+. +.+.++++.++|+++|+++|.||+.. |..+-.. . ... -+ -.||
T Consensus 217 --~~vAa-vi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg-~---~~~-~g---v~PD----- 279 (453)
T PRK07046 217 --GDVAA-VLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGG-Y---TRA-HG---LEPD----- 279 (453)
T ss_pred --CCeEE-EEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcc-h---hHH-hC---CCcc-----
Confidence 14544 44556 33335444 45679999999999999999999986 4322111 1 111 11 2367
Q ss_pred EeccCcCcccccccc
Q 018147 345 FQSVSKGRYFHFFSK 359 (360)
Q Consensus 345 ~~S~SK~~~g~~RvG 359 (360)
+-+|+|+++||.-+|
T Consensus 280 i~t~gK~lggG~Pi~ 294 (453)
T PRK07046 280 FLVVGKPIAGGVPCA 294 (453)
T ss_pred ceeehhhhcCCCcce
Confidence 235899999887554
No 342
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.60 E-value=2.4e-06 Score=85.70 Aligned_cols=209 Identities=15% Similarity=0.125 Sum_probs=119.7
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCC---CCCCCEEEcCC
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFP---ADPNDIFLTDG 198 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~---~~~~~I~~t~G 198 (360)
...+||+..+ -.--+|.+.+++.+.+..........+. .+.+..+++.+.+..... -..+.++++++
T Consensus 63 G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~-----~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~s 137 (472)
T PRK08742 63 GRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFT-----HEPAVQLAEQLLAIAPRQDGRAPLSKVFYADN 137 (472)
T ss_pred CCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccccC-----CHHHHHHHHHHHHhCCCcccCCCCCEEEEeCC
Confidence 4456666444 2244788999988887654220111222 233556666665543210 12358999999
Q ss_pred hHHHHHHHHHHHcc------CC-CCEEEEcCCCchHHHHHHHHcCCe-------------EEEeecCCC--CCcCC----
Q 018147 199 ASPAVHMMMQLLIR------SE-NDGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEA--TGWGL---- 252 (360)
Q Consensus 199 a~~al~~~~~~l~~------~~-gd~Vlv~~P~y~~~~~~~~~~g~~-------------~~~v~~~~~--~~~~~---- 252 (360)
+++|+..+++.... .+ ..+|+...-.|.+........+.. +..+|.... ..++.
T Consensus 138 GSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~ 217 (472)
T PRK08742 138 GSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAED 217 (472)
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHH
Confidence 99999999887531 02 367888888887665333222111 122221110 01111
Q ss_pred ----CHHHHHHHHHHHHhcCCCccEEEEecC--CCCccc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCC
Q 018147 253 ----ETSEVKKQLEAAKAKGITVRALVVINP--GNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHS 325 (360)
Q Consensus 253 ----d~~~L~~~i~~~~~~g~~~k~iil~~P--~NPTG~-~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s 325 (360)
+++.+++.+.. ...++.+| |..| ++-.|. ..+++-++++.++|+++|+++|.||+..+|...+. ...
T Consensus 218 ~~~~~~~~l~~~~~~---~~~~iAAv-I~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~--~~a 291 (472)
T PRK08742 218 YALQAADALQALFEQ---SPGEICAL-ILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGT--LFA 291 (472)
T ss_pred HHHHHHHHHHHHHHh---CCCceEEE-EEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc--chH
Confidence 24555555542 11245444 4555 555676 45677899999999999999999999999755443 222
Q ss_pred HHHHHHhhCCCCCCceEEEEeccCcCccccc
Q 018147 326 FKKVSRSMGYGEKDISLVSFQSVSKGRYFHF 356 (360)
Q Consensus 326 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~ 356 (360)
+... +-.|| +-.++|+++||.
T Consensus 292 ~e~~-----gv~PD-----iv~~gKgl~gG~ 312 (472)
T PRK08742 292 CEQA-----GVMPD-----LLCLSKGLTGGF 312 (472)
T ss_pred HHhc-----CCCCC-----EEEEcccccCCC
Confidence 2111 12377 334589998884
No 343
>PRK07481 hypothetical protein; Provisional
Probab=98.59 E-value=6.3e-06 Score=82.32 Aligned_cols=198 Identities=15% Similarity=0.140 Sum_probs=110.0
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc------C
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------S 213 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~------~ 213 (360)
-+|++.+++.+.+..... ...+.. -..+.+..+|+.+.+..+ +-..+.+++++++++|+..+++.... .
T Consensus 59 ~~p~v~~Ai~~ql~~~~~--~~~~~~--~~~~~~~~lae~L~~~~~-~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~ 133 (449)
T PRK07481 59 NREEVKEAIVRQLDELEY--YSTFDG--TTHPRAIELSYELIDMFA-PEGMRRVFFSSGGSDSVETALKLARQYWKVRGQ 133 (449)
T ss_pred CCHHHHHHHHHHHHhccc--eecccc--cCCHHHHHHHHHHHHhcC-CCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCC
Confidence 367899999888876431 111100 012445556666655432 11245899999999999999886531 0
Q ss_pred C-CCEEEEcCCCchHHHHHHHHcCCe-------------EEEeecCC--CCCcC-CCHHHHHHHHH----HHHh-cC-CC
Q 018147 214 E-NDGILCPIPQYPLYSASIALHGGT-------------LVPYYLDE--ATGWG-LETSEVKKQLE----AAKA-KG-IT 270 (360)
Q Consensus 214 ~-gd~Vlv~~P~y~~~~~~~~~~g~~-------------~~~v~~~~--~~~~~-~d~~~L~~~i~----~~~~-~g-~~ 270 (360)
+ ..+|+...-.|.+........... +..++... ...|. -|.+.+++.+. .... ++ .+
T Consensus 134 ~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~ 213 (449)
T PRK07481 134 PERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDT 213 (449)
T ss_pred CCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCc
Confidence 2 256888888887754322222111 11121110 00122 24444433322 1111 12 24
Q ss_pred ccEEEEecC-CCCcccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEecc
Q 018147 271 VRALVVINP-GNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV 348 (360)
Q Consensus 271 ~k~iil~~P-~NPTG~~-~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~ 348 (360)
+.+|+ ..| +.-.|.+ .+.+-+++|.++|+++|+++|.||+..+|...+. ...+. ...-.|| +-.+
T Consensus 214 iAAvi-iEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~--~~a~~-----~~gv~PD-----iv~~ 280 (449)
T PRK07481 214 IAAFI-AEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGS--WFGSR-----GWGVKPD-----IMCL 280 (449)
T ss_pred EEEEE-EecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCch--hhHhh-----hcCCCCC-----EEEE
Confidence 54454 455 4445664 4667799999999999999999999999644432 11111 1112367 3345
Q ss_pred CcCcccc
Q 018147 349 SKGRYFH 355 (360)
Q Consensus 349 SK~~~g~ 355 (360)
+|++++|
T Consensus 281 gKgl~gG 287 (449)
T PRK07481 281 AKGITSG 287 (449)
T ss_pred eecccCC
Confidence 8998887
No 344
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.59 E-value=1.1e-06 Score=80.41 Aligned_cols=169 Identities=17% Similarity=0.186 Sum_probs=112.6
Q ss_pred CCCCCCCC-cCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcC-CCchHHHH------
Q 018147 159 ATGAYSHS-QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYSA------ 230 (360)
Q Consensus 159 ~~~~Y~~~-~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~-P~y~~~~~------ 230 (360)
...+|+.. -|-..|.+--|+-+ |.....-+.-+.+ +++||..++..+++ |||+.+... --|.....
T Consensus 56 ~stGYGydD~GRdtLe~vyA~vf----~aE~a~VRpq~is-GTHAI~~aLfg~LR-pgDell~i~G~PYDTLeevIG~rg 129 (416)
T COG4100 56 GSTGYGYDDLGRDTLERVYAQVF----GAEAALVRPQIIS-GTHAIACALFGILR-PGDELLYITGSPYDTLEEVIGLRG 129 (416)
T ss_pred CCCCCCccccchhHHHHHHHHHh----ccccceeeeeeec-chhHHHHHHHhccC-CCCeEEEecCCcchhHHHHhccCC
Confidence 35556553 24444444444444 4221112333444 58999999999995 999987544 22333332
Q ss_pred ----HHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEec-CCCCcccCCCHHHHHHHHHHHHHc--C
Q 018147 231 ----SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN-PGNPTGQVLAEENQRAIVDFCKKE--G 303 (360)
Q Consensus 231 ----~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~-P~NPTG~~~~~~~l~~i~~la~~~--~ 303 (360)
.++.+|.....+|+..++ .+|.+.+++++++ ++|+|.|.. ...-.--.++.+++++++++.++- |
T Consensus 130 ~~~gSL~dfgi~Y~~v~Lt~~g--kiD~~~v~~~i~~------~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn 201 (416)
T COG4100 130 EGQGSLKDFGIKYKAVPLTADG--KIDIQAVKTAISD------RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPN 201 (416)
T ss_pred CCcccHHHhCcceeecccccCC--cccHHHHHHhcCc------cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCC
Confidence 345567888889998765 8999999999987 899998873 333333357788999999999985 7
Q ss_pred CEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccc
Q 018147 304 LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHF 356 (360)
Q Consensus 304 i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~ 356 (360)
+++++|.+|++|+-..++- .++ -| +..+|+-|.-+||+
T Consensus 202 ~ivFVDNCYGEFvE~~EPt---------~vG---aD---liAGSLIKNpGGgi 239 (416)
T COG4100 202 VIVFVDNCYGEFVEEKEPT---------HVG---AD---LIAGSLIKNPGGGI 239 (416)
T ss_pred EEEEEeccchhhhhccCcc---------ccc---hh---hhccceeeCCCCce
Confidence 9999999999977554321 111 12 66788888777654
No 345
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.58 E-value=5e-06 Score=83.33 Aligned_cols=198 Identities=13% Similarity=0.140 Sum_probs=113.5
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-----C
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-----S 213 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-----~ 213 (360)
--+|.+.+++.+.+..........|. .+.+..+|+.+.+.. +...+.+++++++++|+..+++.... .
T Consensus 63 h~~p~v~~Ai~~ql~~l~~~~~~~~~-----~~~~~~lae~L~~~~--p~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g 135 (466)
T PRK07030 63 HANPRINQRIKDQVDQLEHVILAGFS-----HEPVIELSERLVKIT--PPGLSRCFYADNGSSAIEVALKMSFHYWRNRG 135 (466)
T ss_pred CCCHHHHHHHHHHHHhcCCccccccC-----CHHHHHHHHHHHHhC--CCCcCEEEEeCCcHHHHHHHHHHHHHHHHHhC
Confidence 34788999998888764320111222 234455666665432 22346899999999999999887521 1
Q ss_pred --CCCEEEEcCCCchHHHHHHHHcCCe-------------EEEeecCCC--CCcCC--------CHHHHHHHHHHHHhcC
Q 018147 214 --ENDGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEA--TGWGL--------ETSEVKKQLEAAKAKG 268 (360)
Q Consensus 214 --~gd~Vlv~~P~y~~~~~~~~~~g~~-------------~~~v~~~~~--~~~~~--------d~~~L~~~i~~~~~~g 268 (360)
...+|+...-.|.+........+.. +..+|.... ..++. +++.+++.+.. .+
T Consensus 136 ~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~---~~ 212 (466)
T PRK07030 136 KPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAE---HH 212 (466)
T ss_pred CCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CC
Confidence 2356888888887654333222111 112221110 00111 24455666642 12
Q ss_pred CCccEEEEecC--CCCcccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEE
Q 018147 269 ITVRALVVINP--GNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSF 345 (360)
Q Consensus 269 ~~~k~iil~~P--~NPTG~~-~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~ 345 (360)
.++.+|+ ..| +.-.|.+ .+.+-+++|.++|+++|+++|.||+..+|...+. ...+.. .+-.|| +
T Consensus 213 ~~iAAvi-~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~--~~a~~~-----~gv~PD-----i 279 (466)
T PRK07030 213 DEIAAVI-VEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGT--MFACEQ-----AGIRPD-----F 279 (466)
T ss_pred CceEEEE-EecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcccc--chHHHh-----cCCCCC-----E
Confidence 2454554 445 4445664 4567899999999999999999999998644442 211111 112367 3
Q ss_pred eccCcCccccc-ccc
Q 018147 346 QSVSKGRYFHF-FSK 359 (360)
Q Consensus 346 ~S~SK~~~g~~-RvG 359 (360)
-.++|+++||. -+|
T Consensus 280 v~~gKgl~gG~~Pi~ 294 (466)
T PRK07030 280 LCLSKALTGGYLPLA 294 (466)
T ss_pred EeeehhccCCcccce
Confidence 34589998883 443
No 346
>PRK07480 putative aminotransferase; Validated
Probab=98.58 E-value=2.7e-06 Score=85.02 Aligned_cols=197 Identities=15% Similarity=0.152 Sum_probs=108.4
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-----C-
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-----S- 213 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-----~- 213 (360)
-+|.+++++.+.+..... ...+ .....+.+..+|+.+.+..+ ...+.+++++++++|+..+++.... +
T Consensus 67 ~~p~v~~Ai~~q~~~~~~--~~~~--~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~ 140 (456)
T PRK07480 67 GRKELADAAARQMRELPY--YNTF--FKTTHPPAIELAAKLAEVAP--PGFNHVFFTNSGSEANDTVLRMVRHYWALKGK 140 (456)
T ss_pred CCHHHHHHHHHHHHhcCC--cccc--cccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCC
Confidence 378899999988886432 1111 01123445556666655432 2246899999999999999886531 0
Q ss_pred C-CCEEEEcCCCchHHHHHHHHc-CCe------------EEEeecCC--CCCcCCC--------HHHHHHHHHHHHhcCC
Q 018147 214 E-NDGILCPIPQYPLYSASIALH-GGT------------LVPYYLDE--ATGWGLE--------TSEVKKQLEAAKAKGI 269 (360)
Q Consensus 214 ~-gd~Vlv~~P~y~~~~~~~~~~-g~~------------~~~v~~~~--~~~~~~d--------~~~L~~~i~~~~~~g~ 269 (360)
+ ...|+...-.|.+........ |.. +..++... ...+..+ .+.|++.+... ...
T Consensus 141 ~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~ 218 (456)
T PRK07480 141 PQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL--GAD 218 (456)
T ss_pred CCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCC
Confidence 2 346887777777643222111 111 11111000 0000111 24444444321 112
Q ss_pred CccEEEEecCCCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEecc
Q 018147 270 TVRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV 348 (360)
Q Consensus 270 ~~k~iil~~P~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~ 348 (360)
++.+|++.-.+.-.|.+. +.+-+++|.++|++||+++|.||++.+|.-.+. ...+.. .+ -.|| +-+|
T Consensus 219 ~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~--~~a~~~--~g---v~PD-----iv~~ 286 (456)
T PRK07480 219 NVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGE--WFGSQH--FG---IKPD-----LMTI 286 (456)
T ss_pred cEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcc--hhhhhh--cC---CCCC-----eeee
Confidence 454555442244456654 566799999999999999999999998633332 222111 11 2367 3467
Q ss_pred CcCccccc
Q 018147 349 SKGRYFHF 356 (360)
Q Consensus 349 SK~~~g~~ 356 (360)
+|+++||.
T Consensus 287 gK~l~gG~ 294 (456)
T PRK07480 287 AKGLTSGY 294 (456)
T ss_pred ehhhccCC
Confidence 99998874
No 347
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.57 E-value=8.4e-06 Score=81.58 Aligned_cols=215 Identities=14% Similarity=0.047 Sum_probs=117.9
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGAS 200 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-~~I~~t~Ga~ 200 (360)
...+||+..+ -.--+|++++++.+.+..... .... . -..+.+..+|+.+.+.....-.. ..++++++++
T Consensus 57 G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~--~~~~-~--~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGs 131 (459)
T PRK06931 57 GNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLP--LHTL-D--LTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGA 131 (459)
T ss_pred CCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhcc--cccc-c--cCCHHHHHHHHHHHHhCCCccccceEEEeCCCcH
Confidence 4456676555 234478899999888865221 1111 0 12345566677776543211011 1246668889
Q ss_pred HHHHHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHcCC-------------eEEEeecCCC--CCcC----CCHHHHHHH
Q 018147 201 PAVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGG-------------TLVPYYLDEA--TGWG----LETSEVKKQ 260 (360)
Q Consensus 201 ~al~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~g~-------------~~~~v~~~~~--~~~~----~d~~~L~~~ 260 (360)
+|+..+++.... .....|+...-.|.+.......... .+..+|.... ..|. -+.+.+++.
T Consensus 132 EAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (459)
T PRK06931 132 DAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYY 211 (459)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHH
Confidence 999998886532 1346788888888876544442211 1122222110 0011 123444333
Q ss_pred HHHHHh----cCCCccEEEEecC-CCCcccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhC
Q 018147 261 LEAAKA----KGITVRALVVINP-GNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (360)
Q Consensus 261 i~~~~~----~g~~~k~iil~~P-~NPTG~~-~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~ 334 (360)
+++... ...++.+|| .-| +.-.|.+ .+.+-++++.++|+++|+++|.||+..+|.-.+. ...+.. .
T Consensus 212 ~~~~~~~~~~~~~~iAAvI-~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~--~~a~~~-----~ 283 (459)
T PRK06931 212 FENFIEDVESGVRKPAAVI-LEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGK--MFAFEH-----A 283 (459)
T ss_pred HHHHHHhhhcCCCceEEEE-EccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCch--HHHhhh-----c
Confidence 333221 112354444 455 3334654 4677899999999999999999999999643332 211111 1
Q ss_pred CCCCCceEEEEeccCcCcccccccc
Q 018147 335 YGEKDISLVSFQSVSKGRYFHFFSK 359 (360)
Q Consensus 335 ~~~~~~~~i~~~S~SK~~~g~~RvG 359 (360)
.-.|| +-+++|++++|.-+|
T Consensus 284 gv~PD-----ivt~gK~l~gG~Pi~ 303 (459)
T PRK06931 284 GIEPD-----IIVMSKAVGGGLPLA 303 (459)
T ss_pred CCCCC-----EEEecccccCCccee
Confidence 12377 345699999886543
No 348
>PRK06105 aminotransferase; Provisional
Probab=98.57 E-value=3.1e-06 Score=84.75 Aligned_cols=208 Identities=16% Similarity=0.116 Sum_probs=117.0
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
...+||+..+ -.--+|.+++++.+.+.+.+. ...+. ....+.+.++++.+.+... -.-+.+++++++++
T Consensus 47 G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~--~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGse 120 (460)
T PRK06105 47 GKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPF--YHTFS--HKSHGPVIDLAEKLVAMAP--VPMSKVFFTNSGSE 120 (460)
T ss_pred CCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCC--eeccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHH
Confidence 4456666544 223478899999998887432 11111 1122344456666655432 12368999999999
Q ss_pred HHHHHHHHHcc-----C-C-CCEEEEcCCCchHHHHHHHHc-CCe------------EEEeecCCCCCcC----------
Q 018147 202 AVHMMMQLLIR-----S-E-NDGILCPIPQYPLYSASIALH-GGT------------LVPYYLDEATGWG---------- 251 (360)
Q Consensus 202 al~~~~~~l~~-----~-~-gd~Vlv~~P~y~~~~~~~~~~-g~~------------~~~v~~~~~~~~~---------- 251 (360)
|+..+++.... . + ..+|+...-.|.+........ +.. +..++......+.
T Consensus 121 Ave~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 200 (460)
T PRK06105 121 ANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFA 200 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHH
Confidence 99999987421 0 2 356888777777654322111 110 1111111000000
Q ss_pred -CCHHHHHHHHHHHHhcCCCccEEEEecC-CCCcccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHH
Q 018147 252 -LETSEVKKQLEAAKAKGITVRALVVINP-GNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKK 328 (360)
Q Consensus 252 -~d~~~L~~~i~~~~~~g~~~k~iil~~P-~NPTG~~-~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~ 328 (360)
...+++++.+... ...++.+| |..| +.-.|.+ .+.+-+++|.++|++||+++|.||++.+|.-.+. ...+..
T Consensus 201 ~~~~~~le~~~~~~--~~~~iAav-IvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~--~f~~~~ 275 (460)
T PRK06105 201 TRLANELEALILAE--GPDTIAAF-IGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGN--MFGCET 275 (460)
T ss_pred HHHHHHHHHHHHHc--CCCceEEE-EEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCch--hhhHHh
Confidence 0134566665421 11245444 4555 4445665 4777899999999999999999999988644442 222211
Q ss_pred HHHhhCCCCCCceEEEEeccCcCcccc
Q 018147 329 VSRSMGYGEKDISLVSFQSVSKGRYFH 355 (360)
Q Consensus 329 ~~~~~~~~~~~~~~i~~~S~SK~~~g~ 355 (360)
.+-.|| +-.+||++++|
T Consensus 276 -----~~v~PD-----i~~~gK~lggG 292 (460)
T PRK06105 276 -----FGIKPD-----ILVMSKQLSSS 292 (460)
T ss_pred -----cCCCCC-----eeeeecccccC
Confidence 112367 34789999887
No 349
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.57 E-value=3.2e-06 Score=82.75 Aligned_cols=194 Identities=18% Similarity=0.226 Sum_probs=112.4
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc------CC
Q 018147 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------SE 214 (360)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~------~~ 214 (360)
.+++.+++.+++++.+........... ..+|-+.+++.. . +-+-++|++++|+++|+..+++.... .|
T Consensus 62 ~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~a----P-~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p 135 (449)
T COG0161 62 RPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELA----P-EGGLDHVFFTDSGSEAVETALKMALQYWRARGQP 135 (449)
T ss_pred CHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhC----C-CCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCC
Confidence 677889999999887642122222222 344444444443 1 12257899999999999999987542 23
Q ss_pred C-CEEEEcCCCchHHHHHHHHc-C-------------CeEEEeecCC---C---CCcC----CCHHHHHHHHHHHHhcCC
Q 018147 215 N-DGILCPIPQYPLYSASIALH-G-------------GTLVPYYLDE---A---TGWG----LETSEVKKQLEAAKAKGI 269 (360)
Q Consensus 215 g-d~Vlv~~P~y~~~~~~~~~~-g-------------~~~~~v~~~~---~---~~~~----~d~~~L~~~i~~~~~~g~ 269 (360)
+ ..++.-...|.+-.-..-.. | ..+..++... . +.+. -..++|++.|.. .|+
T Consensus 136 ~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~---~g~ 212 (449)
T COG0161 136 QRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILE---HGP 212 (449)
T ss_pred cceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHh---cCc
Confidence 3 33777777776432111111 1 1111222111 1 1111 124555555554 243
Q ss_pred CccEEEEecC--CCCcccCCCHH-HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEe
Q 018147 270 TVRALVVINP--GNPTGQVLAEE-NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (360)
Q Consensus 270 ~~k~iil~~P--~NPTG~~~~~~-~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~ 346 (360)
..-+.+|..| +--.|..++.. -|+++.++|++||+++|.||+-.+|-..+. .|.+ .. ..--|| +-
T Consensus 213 ~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~-~FA~-----e~-~gi~PD-----i~ 280 (449)
T COG0161 213 ETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGK-MFAC-----EH-AGIVPD-----IL 280 (449)
T ss_pred ccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCch-hhhh-----hh-cCCCCC-----ee
Confidence 4445666677 44477766554 699999999999999999999999766654 1211 11 112377 45
Q ss_pred ccCcCcccc
Q 018147 347 SVSKGRYFH 355 (360)
Q Consensus 347 S~SK~~~g~ 355 (360)
+++|++++|
T Consensus 281 ~~aKGLT~G 289 (449)
T COG0161 281 CLAKGLTGG 289 (449)
T ss_pred eeccccccc
Confidence 678888765
No 350
>PRK07036 hypothetical protein; Provisional
Probab=98.53 E-value=6.2e-06 Score=82.71 Aligned_cols=211 Identities=15% Similarity=0.164 Sum_probs=116.5
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
...++|+..+ -.--+|.+.+++.+.+..... ...+.. ...+.+..+|+.+.+.. +-..+.+++++++++
T Consensus 50 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~--~~~~~~--~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGse 123 (466)
T PRK07036 50 GRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPY--YTPFGD--MTNAPAAELAAKLAELA--PGDLNHVFLTTGGST 123 (466)
T ss_pred CCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcc--cccccc--cCCHHHHHHHHHHHHhC--CCCcCEEEEeCCchH
Confidence 4445665444 223378899999888876421 111210 11244556666665542 222468999999999
Q ss_pred HHHHHHHHHcc-----C-C-CCEEEEcCCCchHHHHHHHHcCC-------------eEEEeecCC--CCCcCCC------
Q 018147 202 AVHMMMQLLIR-----S-E-NDGILCPIPQYPLYSASIALHGG-------------TLVPYYLDE--ATGWGLE------ 253 (360)
Q Consensus 202 al~~~~~~l~~-----~-~-gd~Vlv~~P~y~~~~~~~~~~g~-------------~~~~v~~~~--~~~~~~d------ 253 (360)
|+..+++.... + + ..+|+...-.|.+....+..... .+..++... ...++..
T Consensus 124 Ave~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 203 (466)
T PRK07036 124 AVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCD 203 (466)
T ss_pred HHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHH
Confidence 99999886521 1 1 35788888888765533222211 122222111 0011221
Q ss_pred --HHHHHHHHHHHHhcCCCccEEEEecCCCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHH
Q 018147 254 --TSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVS 330 (360)
Q Consensus 254 --~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~ 330 (360)
.+.+++.+... ...++.+|++.-.+.-.|.+. +.+-+++|.++|++||+++|.||+..+|.-.+. ...+..
T Consensus 204 ~~~~~~~~~i~~~--~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~--~~~~~~-- 277 (466)
T PRK07036 204 FLVDEFEDKILSL--GADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGH--FFASEA-- 277 (466)
T ss_pred HHHHHHHHHHHHc--CCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCch--hhhhhh--
Confidence 23344444321 112454555443344456654 667799999999999999999999988643332 111110
Q ss_pred HhhCCCCCCceEEEEeccCcCccccc
Q 018147 331 RSMGYGEKDISLVSFQSVSKGRYFHF 356 (360)
Q Consensus 331 ~~~~~~~~~~~~i~~~S~SK~~~g~~ 356 (360)
.....|| +-+++|++++|.
T Consensus 278 --~~gv~PD-----ivt~gK~l~gG~ 296 (466)
T PRK07036 278 --VFGIQPD-----IITFAKGLTSGY 296 (466)
T ss_pred --hcCCCCC-----EEEEccccccCc
Confidence 1112367 346799998883
No 351
>PRK07678 aminotransferase; Validated
Probab=98.51 E-value=6.2e-06 Score=82.39 Aligned_cols=205 Identities=16% Similarity=0.165 Sum_probs=114.0
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
...+||+..+ -.--+|++++++.+.+...... ...|. .+....+|+.+.+..+ ..+.+++++++++
T Consensus 46 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~-~~~~~-----~~~~~~lae~l~~~~~---~~~~v~f~~sGse 116 (451)
T PRK07678 46 GNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYF-PLTQS-----HEPAIKLAEKLNEWLG---GEYVIFFSNSGSE 116 (451)
T ss_pred CCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcc-ccccC-----CHHHHHHHHHHHHhCC---CCCEEEEeCCcHH
Confidence 3445555443 1233788999998888764320 11122 2234455666655433 1357999999999
Q ss_pred HHHHHHHHHcc------CCC-CEEEEcCCCchHHHHHHHHc-CC------------eEEEeecCCC--CCcCC-----C-
Q 018147 202 AVHMMMQLLIR------SEN-DGILCPIPQYPLYSASIALH-GG------------TLVPYYLDEA--TGWGL-----E- 253 (360)
Q Consensus 202 al~~~~~~l~~------~~g-d~Vlv~~P~y~~~~~~~~~~-g~------------~~~~v~~~~~--~~~~~-----d- 253 (360)
|+..+++.... .+| .+|+...-.|.+....+... |. .+..++.... ..|.. +
T Consensus 117 A~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (451)
T PRK07678 117 ANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDL 196 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHH
Confidence 99998887531 022 57888888887654433222 11 1112221110 00110 1
Q ss_pred --HHHHHHHHHHHHhcCCCccEEEEecC-CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHH
Q 018147 254 --TSEVKKQLEAAKAKGITVRALVVINP-GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKV 329 (360)
Q Consensus 254 --~~~L~~~i~~~~~~g~~~k~iil~~P-~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~ 329 (360)
++.+++.++.. ...++.+|+ ..| +.-.|.+. +.+-++++.++|++||+++|.||+..+|...+. ...+..
T Consensus 197 ~~~~~l~~~~~~~--~~~~iAAvi-~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~--~~~~~~- 270 (451)
T PRK07678 197 ECVKEIDRVMTWE--LSETIAAVI-MEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGK--AFGFMN- 270 (451)
T ss_pred HHHHHHHHHHHhc--CCCceEEEE-EccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCch--hHHHHh-
Confidence 12244445421 122454444 455 43356554 567799999999999999999999998644442 211111
Q ss_pred HHhhCCCCCCceEEEEeccCcCcccc
Q 018147 330 SRSMGYGEKDISLVSFQSVSKGRYFH 355 (360)
Q Consensus 330 ~~~~~~~~~~~~~i~~~S~SK~~~g~ 355 (360)
-+ -.|| +-+++|++++|
T Consensus 271 -~g---v~PD-----ivt~gK~lggG 287 (451)
T PRK07678 271 -YG---VKPD-----IITMAKGITSA 287 (451)
T ss_pred -cC---CCCC-----EEEeecccccC
Confidence 11 2367 23679999987
No 352
>PRK06149 hypothetical protein; Provisional
Probab=98.50 E-value=5.8e-06 Score=89.99 Aligned_cols=212 Identities=17% Similarity=0.192 Sum_probs=117.9
Q ss_pred CCCccccCcc---CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 018147 127 HPSILDRSET---QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (360)
Q Consensus 127 ~p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al 203 (360)
+..+||+..+ -.--+|++++++.+.+..... ...|.. +....+++.+.+.. +-..+.+++++++++|.
T Consensus 584 G~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~--~~~~~~-----~~~~elae~L~~~~--p~~~~~v~f~~SGsEA~ 654 (972)
T PRK06149 584 GRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNT--NSRFHY-----AAVAEFSERLAALA--PDGLDTVFLVNSGSEAN 654 (972)
T ss_pred CCEEEECCCCccccCCCCHHHHHHHHHHHHhccc--cccccC-----HHHHHHHHHHHHhC--CCCcCEEEEeCCchHHH
Confidence 4456666555 222578999999888876432 222321 23444555554432 11236899999999999
Q ss_pred HHHHHHHcc-CCCCEEEEcCCCchHHHHHHHHc-CC-------------eEEEeecCC--CCCcC-CC-----HHHHHHH
Q 018147 204 HMMMQLLIR-SENDGILCPIPQYPLYSASIALH-GG-------------TLVPYYLDE--ATGWG-LE-----TSEVKKQ 260 (360)
Q Consensus 204 ~~~~~~l~~-~~gd~Vlv~~P~y~~~~~~~~~~-g~-------------~~~~v~~~~--~~~~~-~d-----~~~L~~~ 260 (360)
..+++.... .....|+...-.|.+........ +. .+..++... ...|. .+ .+.+++.
T Consensus 655 e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 734 (972)
T PRK06149 655 DLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQ 734 (972)
T ss_pred HHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHH
Confidence 999984321 13456887777777544221111 10 011221111 01121 11 2455555
Q ss_pred HHHHHhcCCCccEEEEecC--CCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCC
Q 018147 261 LEAAKAKGITVRALVVINP--GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (360)
Q Consensus 261 i~~~~~~g~~~k~iil~~P--~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~ 338 (360)
++.....+.++.+ +|..| ++--....+.+-+++|.++|++||+++|.||+..+|.-.+. .+..+... + -.|
T Consensus 735 l~~~~~~~~~iAa-vI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~-~~~a~e~~--g---v~P 807 (972)
T PRK06149 735 LEELDASGRGLAG-FICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGH-YFWGFEQQ--G---VVP 807 (972)
T ss_pred HHHHhhcCCceEE-EEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCc-cchhhhhc--C---CCC
Confidence 5433222334544 44555 44333456677899999999999999999999988643332 12222111 1 126
Q ss_pred CceEEEEeccCcCcccccccc
Q 018147 339 DISLVSFQSVSKGRYFHFFSK 359 (360)
Q Consensus 339 ~~~~i~~~S~SK~~~g~~RvG 359 (360)
| ++ +++|++++|.-+|
T Consensus 808 D--iv---t~gK~lg~G~Pl~ 823 (972)
T PRK06149 808 D--II---TMAKGMGNGHPLG 823 (972)
T ss_pred C--EE---EecccccCCeeeE
Confidence 7 22 7899999886544
No 353
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=98.50 E-value=2.5e-06 Score=80.83 Aligned_cols=188 Identities=12% Similarity=0.085 Sum_probs=123.5
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCc----HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-C
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGI----KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-S 213 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~----~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-~ 213 (360)
.-+|.+.+++.+.++..+. +.++-....|. ..|.+.+|++. + ++..+++++ .--|....+..|.+ -
T Consensus 185 s~Hp~V~~A~~~tl~~hG~-GAGGTRNIsG~s~~hv~LE~eLA~LH----q---K~aALlFsS-CfVANDstLftLak~l 255 (570)
T KOG1360|consen 185 SRHPEVLDAMHDTLDRHGA-GAGGTRNISGHSKHHVRLEAELADLH----Q---KEAALLFSS-CFVANDSTLFTLAKKL 255 (570)
T ss_pred cCChHHHHHHHHHHHHcCC-CcCCccccCCCCchhhhHHHHHHHHh----c---Ccceeeeee-eeeccchHHHHHHHHC
Confidence 4578899999999988754 44444444444 45666666665 2 122233322 22222222222211 2
Q ss_pred CCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHH
Q 018147 214 ENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQR 293 (360)
Q Consensus 214 ~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~ 293 (360)
||-+|+-..-.+......++..++.-..+.. -|++.|++.++.... ..+|+|-+...+.-+|.+-+ ++
T Consensus 256 pgcei~SD~gNHASMI~GIrns~v~K~IFrH-------ND~~hL~~lL~~~~~--svPKivAFEtVhSM~Gavcp---le 323 (570)
T KOG1360|consen 256 PGCEIFSDEGNHASMIQGIRNSRVPKHIFRH-------NDLDHLEQLLQSSPK--SVPKIVAFETVHSMDGAVCP---LE 323 (570)
T ss_pred CCcEEeccccchHHHHHHhhhcCCcceeecc-------CCHHHHHHHHHhCCC--CCCceEEEeeeeccCCCcCC---HH
Confidence 8888888888888998888888876554432 278999999876322 25788888899999999999 99
Q ss_pred HHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 294 ~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
+|++++++||.+-++||++.--.|++... .+... +++ .+.+ -|+-+++.|+|+.
T Consensus 324 elcDvah~yGAiTFlDEVHAVGlYG~rGa--Gvger-dGv---m~kv-DiIsGTLgKafGc 377 (570)
T KOG1360|consen 324 ELCDVAHKYGAITFLDEVHAVGLYGPRGA--GVGER-DGV---MHKV-DIISGTLGKAFGC 377 (570)
T ss_pred HHHHHHHHhCceeeeehhhhhccccCCCC--Ccccc-CCc---chhh-hhcccchhhhccc
Confidence 99999999999999999998888875321 11000 110 0111 2667999998863
No 354
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.49 E-value=4.3e-06 Score=88.58 Aligned_cols=168 Identities=22% Similarity=0.267 Sum_probs=112.4
Q ss_pred CCCCCC---CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcC-ChHHHHHH---HHHHHccC----CCCEEEEcCCCchHH
Q 018147 160 TGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLTD-GASPAVHM---MMQLLIRS----ENDGILCPIPQYPLY 228 (360)
Q Consensus 160 ~~~Y~~---~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~-Ga~~al~~---~~~~l~~~----~gd~Vlv~~P~y~~~ 228 (360)
.+.|.| .+|..++...+.+++.+..|.+. +-+-+ ++.++-.. +++..... ..+.|+++.-.|...
T Consensus 529 ~hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtN 604 (954)
T PRK12566 529 LHPFAPREQAEGYRAMIDELEAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTN 604 (954)
T ss_pred CCCCCchhhhcCHHHHHHHHHHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccC
Confidence 467888 88999999999999998877543 33433 23333322 33332111 235688888777443
Q ss_pred HHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEE
Q 018147 229 SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (360)
Q Consensus 229 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~ 308 (360)
...+...|.+++.+++++++ .+|+++|++.+++. ..++.+|++++|++-. ++ .+++++|+++|+++|.++++
T Consensus 605 pasa~~~GieVv~Vp~D~~G--~iDle~L~a~I~~~---~~~laaVmiT~Pnt~G--v~-e~~V~eI~~iah~~Galv~v 676 (954)
T PRK12566 605 PASAQMAGMRVVIVECDPDG--NVDLDDLKAKAAAA---GDRLSCLMITYPSTHG--VY-EEGIREICEVVHQHGGQVYM 676 (954)
T ss_pred HHHHHHCCCEEEEeccCCCC--CcCHHHHHHHhhcc---CCCEEEEEEEecCcCc--ee-cchHHHHHHHHHHcCCEEEE
Confidence 44477789999999998653 79999999999732 1267778888887644 33 45699999999999999999
Q ss_pred ccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcc
Q 018147 309 DEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRY 353 (360)
Q Consensus 309 DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 353 (360)
|.+...- ... .... .+++ -| |++.++-|.|+
T Consensus 677 DgA~~~a-~~~---l~~P----g~~G---AD---i~~~s~HKtf~ 707 (954)
T PRK12566 677 DGANLNA-QVG---LARP----ADIG---AD---VSHMNLHKTFC 707 (954)
T ss_pred EeeChhh-ccC---CCCh----hhcC---CC---EEEecCCcccC
Confidence 9998521 111 1111 1222 24 77888889775
No 355
>PRK06148 hypothetical protein; Provisional
Probab=98.48 E-value=4.3e-06 Score=91.17 Aligned_cols=213 Identities=15% Similarity=0.075 Sum_probs=120.0
Q ss_pred CCCCccccCcc---CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 018147 126 DHPSILDRSET---QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (360)
Q Consensus 126 ~~p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~a 202 (360)
+...+||+..+ -.--+|.+++++.+.+..... ...|. .+....+|+.+.+... -.-+.+++++++++|
T Consensus 622 dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~--~~~~~-----~~~~~~lAe~L~~~~p--~~~~~v~f~nSGsEA 692 (1013)
T PRK06148 622 RGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNT--NTRYL-----HDAIVAYAERLTATLP--DGLTVAFFVNSGSEA 692 (1013)
T ss_pred CCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCC--cCCcC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHH
Confidence 34556666544 334488899999988876432 22332 2334455555554332 123678999999999
Q ss_pred HHHHHHHHccC-CCCEEEEcCCCchHHHHHHHHc-C------------CeEEEeecC--CCCCcCC-C-------HHHHH
Q 018147 203 VHMMMQLLIRS-ENDGILCPIPQYPLYSASIALH-G------------GTLVPYYLD--EATGWGL-E-------TSEVK 258 (360)
Q Consensus 203 l~~~~~~l~~~-~gd~Vlv~~P~y~~~~~~~~~~-g------------~~~~~v~~~--~~~~~~~-d-------~~~L~ 258 (360)
...+++....- ...+|+...-.|.+........ + ..+..++.. ....|.. + .+.++
T Consensus 693 ~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 772 (1013)
T PRK06148 693 NSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVA 772 (1013)
T ss_pred HHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHH
Confidence 99998876421 3457888888777654321111 1 011111110 0011221 1 13455
Q ss_pred HHHHHHHhcCCCccEEEEecC-CCCccc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 259 KQLEAAKAKGITVRALVVINP-GNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 259 ~~i~~~~~~g~~~k~iil~~P-~NPTG~-~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
+.++.....+.++.+|+ ..| ..--|. ..+++-++++.++|+++|+++|.||+..+|.-.+. .+..+... + -
T Consensus 773 ~~i~~~~~~~~~iAAvI-~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~-~~~a~e~~--g---v 845 (1013)
T PRK06148 773 EQIAAMAAKGRGPAFFI-AESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGS-HWWAFETQ--G---V 845 (1013)
T ss_pred HHHHhhhccCCceEEEE-EcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCC-cchhhhhc--C---C
Confidence 55543222233454554 545 322344 45677899999999999999999999998643332 12222111 1 2
Q ss_pred CCCceEEEEeccCcCcccccccc
Q 018147 337 EKDISLVSFQSVSKGRYFHFFSK 359 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~g~~RvG 359 (360)
.|| +-+++|++++|.-+|
T Consensus 846 ~PD-----ivt~gK~lggG~Plg 863 (1013)
T PRK06148 846 VPD-----IVTMGKPIGNGHPMG 863 (1013)
T ss_pred Ccc-----eeeecccccCCcceE
Confidence 367 356699999886554
No 356
>PRK07483 hypothetical protein; Provisional
Probab=98.48 E-value=6.4e-06 Score=82.06 Aligned_cols=196 Identities=15% Similarity=0.148 Sum_probs=108.4
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccC-----
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS----- 213 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~----- 213 (360)
--+|.+++++.+.++.........|. .+....+|+.+.+... -..+.+++++++++|+..+++....-
T Consensus 46 h~~p~v~~av~~ql~~~~~~~~~~~~-----~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve~AlklAr~~~~~~g 118 (443)
T PRK07483 46 HSHPRVIAAIHAQIDRLAYAHTSFFT-----TEPAEALADRLVAAAP--AGLEHVYFVSGGSEAVEAALKLARQYFVEIG 118 (443)
T ss_pred CCCHHHHHHHHHHHHhccCccccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEcCCcHHHHHHHHHHHHHHHHhcC
Confidence 34788999999888864310111121 2344556666655322 12368999999999999988865310
Q ss_pred -CC-CEEEEcCCCchHHHHHHHH-cCCe------------EEEeecCC-CCC-c-CCC--------HHHHHHHHHHHHhc
Q 018147 214 -EN-DGILCPIPQYPLYSASIAL-HGGT------------LVPYYLDE-ATG-W-GLE--------TSEVKKQLEAAKAK 267 (360)
Q Consensus 214 -~g-d~Vlv~~P~y~~~~~~~~~-~g~~------------~~~v~~~~-~~~-~-~~d--------~~~L~~~i~~~~~~ 267 (360)
+| .+|+...-.|.+....... .|.. +..++... .+. + ..+ ++++++.+... .
T Consensus 119 ~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~ 196 (443)
T PRK07483 119 QPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILEL--G 196 (443)
T ss_pred CCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--C
Confidence 22 4688878777765432222 1110 11121110 000 0 001 24455544321 1
Q ss_pred CCCccEEEEecC-CC-Cccc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEE
Q 018147 268 GITVRALVVINP-GN-PTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVS 344 (360)
Q Consensus 268 g~~~k~iil~~P-~N-PTG~-~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~ 344 (360)
..++.+|+ ..| +- -.|. ..+.+-+++|.++|++||+++|.||+..+|.-.+. ...+.. ..-.||
T Consensus 197 ~~~iAAvi-vEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~--~~a~~~-----~gv~PD----- 263 (443)
T PRK07483 197 PDTVAAFV-AETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGT--LFACEE-----DGVAPD----- 263 (443)
T ss_pred CCceEEEE-EeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcH--HHHHhh-----cCCCCC-----
Confidence 12454454 455 32 2254 45677899999999999999999999998643332 221111 112367
Q ss_pred EeccCcCccccc
Q 018147 345 FQSVSKGRYFHF 356 (360)
Q Consensus 345 ~~S~SK~~~g~~ 356 (360)
+-.++|++++|.
T Consensus 264 iv~~gK~l~gG~ 275 (443)
T PRK07483 264 LVTIAKGLGAGY 275 (443)
T ss_pred eeeehhhhccCc
Confidence 344589998884
No 357
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.44 E-value=3.4e-06 Score=80.18 Aligned_cols=187 Identities=13% Similarity=0.048 Sum_probs=122.1
Q ss_pred CCHHHHHHHHHHHHcCCC---CCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCC
Q 018147 140 FSADSIERAWQILDQIPG---RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~---~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd 216 (360)
.++.|+++.-..+.+... .+..-|+-..-..++.+...+..++.+| .+--+|--.+|+. |...++.+|+ .|||
T Consensus 38 ~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFg--a~~anVQPhSGs~-AN~av~~All-~pGD 113 (413)
T COG0112 38 TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFG--AEYANVQPHSGSQ-ANQAVYLALL-QPGD 113 (413)
T ss_pred CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhC--CCccccCCCCchH-HHHHHHHHHc-CCCC
Confidence 477788886655544321 1233455555455666666666666666 3345666677765 5556667777 4999
Q ss_pred EEEEcCCCchHHHHHH---HHcC--CeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHH
Q 018147 217 GILCPIPQYPLYSASI---ALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (360)
Q Consensus 217 ~Vlv~~P~y~~~~~~~---~~~g--~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~ 291 (360)
+|+-.+-.+.++..-- ...| .+.+.|+++.+ +..+|.|++++...+. ++|+|+.-.-..| ..+ +
T Consensus 114 timgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~e-t~~IDyD~~~k~a~e~-----kPK~ii~G~SaY~--r~i---d 182 (413)
T COG0112 114 TIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPE-TGLIDYDEVEKLAKEV-----KPKLIIAGGSAYS--RPI---D 182 (413)
T ss_pred eEecccCCCCCcccCCCCCCccceeEEeEecccccc-cCccCHHHHHHHHHHh-----CCCEEEECccccc--ccc---C
Confidence 9998887766554211 1122 46778888865 3589999999999886 8999886533322 123 4
Q ss_pred HHHHHHHHHHcCCEEEEccCC-CCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 292 QRAIVDFCKKEGLVLLADEVY-QENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 292 l~~i~~la~~~~i~lI~DeaY-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
++++.++|.+-|.++++|.+| .+++-.+. +++-... .| |+..|.-|+|.|
T Consensus 183 ~~~~reIad~VGA~L~~DmAHiaGLVA~G~--~p~P~~~--------Ad---vVTtTTHKTlrG 233 (413)
T COG0112 183 FKRFREIADEVGAYLMVDMAHVAGLIAGGV--HPNPLPH--------AD---VVTTTTHKTLRG 233 (413)
T ss_pred HHHHHHHHHHhCceEEehHHHHHHHHhccc--CCCCCCc--------cc---eEeCCcccCCCC
Confidence 889999999999999999998 44554443 4332222 23 778999998865
No 358
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.40 E-value=4.4e-06 Score=83.00 Aligned_cols=184 Identities=12% Similarity=0.090 Sum_probs=104.6
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCC-CE
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DG 217 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~g-d~ 217 (360)
--+|.+++++.+.++... .|... ...+..+|+.+.+... ..+.+++++++++|+..+++....-.| ..
T Consensus 64 h~~p~v~~Ai~~q~~~~~-----~~~~~---~~~~~~la~~l~~~~p---~~~~v~f~~sGseA~e~AlklAr~~tgr~~ 132 (431)
T PRK06209 64 HAYPPVVEAVREALQDGC-----NFTRP---SAIELDAAESFLELID---GADMVKFCKNGSDATSAAVRLARAYTGRDL 132 (431)
T ss_pred CCCHHHHHHHHHHHHhCc-----CCCCC---CHHHHHHHHHHHHhCC---ccceEEEecCHHHHHHHHHHHHHHHhCCCe
Confidence 347889999999888642 12221 2223344555544321 136899999999999999986532133 34
Q ss_pred EEEc-CCCchHHHHHHHHcCCeE-----------EEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCccc
Q 018147 218 ILCP-IPQYPLYSASIALHGGTL-----------VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (360)
Q Consensus 218 Vlv~-~P~y~~~~~~~~~~g~~~-----------~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~ 285 (360)
|+.. .-.|..+.... +|... ..+.+. .-|++.|++.++.. ..++ +.++..|- .|.
T Consensus 133 i~~~~~~~~h~~~~~~--~g~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~---~~~~-aavi~Epv--~g~ 199 (431)
T PRK06209 133 VARCADHPFFSTDDWF--IGTTPMSAGIPASVSALTVTFR-----YNDIASLEALFEDH---PGRI-ACVILEPA--TAD 199 (431)
T ss_pred EEEeccCccccccccc--cccCCCCCCCChhHhccccccC-----CCCHHHHHHHHHhC---CCCE-EEEEEccc--cCC
Confidence 5443 22222111000 11110 001111 12789999888642 1134 44555663 344
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCcccccccc
Q 018147 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHFFSK 359 (360)
Q Consensus 286 ~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~RvG 359 (360)
..+.+.+++|.++|++||+++|+||++.++.+.. ..+... -++ .|| +.+++|++++|+-+|
T Consensus 200 ~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~----~g~~~~-~gv---~PD-----i~t~gK~lggG~p~~ 260 (431)
T PRK06209 200 EPQDGFLHEVRRLCHENGALFILDEMITGFRWHM----RGAQKL-YGI---VPD-----LSCFGKALGNGFAVS 260 (431)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc----chhhHH-hCC---Ccc-----eeeehhhhcCCcccE
Confidence 6778899999999999999999999998763321 011111 111 256 366899998876444
No 359
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.37 E-value=4.4e-06 Score=80.14 Aligned_cols=142 Identities=21% Similarity=0.293 Sum_probs=108.1
Q ss_pred CCCCCC---CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEc--CChHH---HHHHHHHHHccCCC----CEEEEcCCCchH
Q 018147 160 TGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLT--DGASP---AVHMMMQLLIRSEN----DGILCPIPQYPL 227 (360)
Q Consensus 160 ~~~Y~~---~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t--~Ga~~---al~~~~~~l~~~~g----d~Vlv~~P~y~~ 227 (360)
.+.|.| .+|..++...+.+||.+.-|+ +.|.+. +|+.. ++ ++++.+-...| +.|++|+-.+..
T Consensus 95 iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~----DavsLQP~AGAqGE~aGl-l~Ir~YHe~rG~~~R~~~LIP~SAHGT 169 (496)
T COG1003 95 IHPFQPEEQVQGYLELIYELQEWLKEITGM----DAVSLQPNAGAQGEYAGL-LAIRAYHESRGEGHRNICLIPDSAHGT 169 (496)
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHhcCC----ceeeccCCCCcchhhHHH-HHHHHHHHHcCCCcCcEEEeeccccCC
Confidence 445555 568899999999999887563 445543 34432 33 33444432233 679999999998
Q ss_pred HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEE
Q 018147 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (360)
Q Consensus 228 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI 307 (360)
-...+.++|.+++.|++++++ .+|+++|++++.+ ++.++.|+||+. .| ++ ++++.+|+++..++|-.|-
T Consensus 170 NPASAam~G~~VV~V~~~~~G--~VDlddLk~k~~~------~~AalMiTnPsT-~G-vF-E~~I~ei~~ivH~~Gg~vY 238 (496)
T COG1003 170 NPASAAMAGFKVVVVKCDENG--NVDLDDLRAKAED------NLAALMITNPST-LG-VF-EEDIREICEIVHEAGGQVY 238 (496)
T ss_pred ChhhHhhcCceEEEEecCCCC--CccHHHHHHHhcc------ceeEEEeccCcc-cc-cc-hhhHHHHHHHHHHcCCEEE
Confidence 888899999999999999875 7899999999987 899999999983 24 33 5789999999999999999
Q ss_pred EccCCCCCcc
Q 018147 308 ADEVYQENVY 317 (360)
Q Consensus 308 ~DeaY~~~~~ 317 (360)
.|.+--.-+.
T Consensus 239 ~DGANlNA~v 248 (496)
T COG1003 239 YDGANLNAIV 248 (496)
T ss_pred ecCcchhhhh
Confidence 9988655333
No 360
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.35 E-value=5.2e-05 Score=75.82 Aligned_cols=186 Identities=15% Similarity=0.075 Sum_probs=103.4
Q ss_pred CCCCccccCcc-----CCCCCHHHHHHHHHH-HHc-CCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCC
Q 018147 126 DHPSILDRSET-----QGLFSADSIERAWQI-LDQ-IPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDG 198 (360)
Q Consensus 126 ~~p~~l~~~~~-----~~~~p~~v~~~~~~~-l~~-~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~G 198 (360)
+...+||+..+ -.--+|.+++++.+. ... ... ...|.... ..++-+.+++.+.+.. +-.-+.++++++
T Consensus 56 dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~--~~~~~~~~-~~~la~~l~~~l~~~~--p~~~~~v~f~~S 130 (464)
T TIGR00699 56 DGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLIN--RPALGNFP-SKDWAKILKEGILKVA--PKGQDQVWTGMS 130 (464)
T ss_pred CCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcc--cccCCcHH-HHHHHHHHHHhHHhhC--CCCcCEEEEeCC
Confidence 35567777665 234588899998863 232 111 11222211 2233333333222221 112368999999
Q ss_pred hHHHHHHHHHHHcc-------C------------------C---CCEEEEcCCCchHHHHHHHHc-CCe-----------
Q 018147 199 ASPAVHMMMQLLIR-------S------------------E---NDGILCPIPQYPLYSASIALH-GGT----------- 238 (360)
Q Consensus 199 a~~al~~~~~~l~~-------~------------------~---gd~Vlv~~P~y~~~~~~~~~~-g~~----------- 238 (360)
+++|+..+++.... . + ...|+...-+|.+........ |..
T Consensus 131 GsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~ 210 (464)
T TIGR00699 131 GSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFD 210 (464)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence 99999999987621 0 1 126888888887654432222 211
Q ss_pred EEEeecCCC-CCcC-----------CCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCC-CHHHHHHHHHHHHHcCCE
Q 018147 239 LVPYYLDEA-TGWG-----------LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLV 305 (360)
Q Consensus 239 ~~~v~~~~~-~~~~-----------~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~-~~~~l~~i~~la~~~~i~ 305 (360)
+..+|.... ..+. -+++.+++.+... +.++.+|++.-...-.|.+. +.+-+++|.++|++||++
T Consensus 211 ~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~---~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~l 287 (464)
T TIGR00699 211 WPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKW---HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVA 287 (464)
T ss_pred ceecCCCCcccccccccccchhHHHHHHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 011111100 0000 1345566666431 12455555443344457766 677899999999999999
Q ss_pred EEEccCCCCCccCC
Q 018147 306 LLADEVYQENVYVP 319 (360)
Q Consensus 306 lI~DeaY~~~~~~~ 319 (360)
+|+||+..++...+
T Consensus 288 LI~DEV~tGfGrtG 301 (464)
T TIGR00699 288 FIVDEVQTGVGATG 301 (464)
T ss_pred EEEeeeeeCCCCCc
Confidence 99999998864433
No 361
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=98.32 E-value=6.1e-06 Score=80.06 Aligned_cols=153 Identities=11% Similarity=0.109 Sum_probs=94.3
Q ss_pred cCccCCCCCHHHHHHHHHHHHcCCCCCCCCCCC--CcCcHHHHHHHHHHHHhhcCCCCC-CCCEEEc-CChHHHHHHHHH
Q 018147 133 RSETQGLFSADSIERAWQILDQIPGRATGAYSH--SQGIKGLRDTIAAGIEARDGFPAD-PNDIFLT-DGASPAVHMMMQ 208 (360)
Q Consensus 133 ~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~--~~G~~~lr~~ia~~l~~~~g~~~~-~~~I~~t-~Ga~~al~~~~~ 208 (360)
|..||...|+++++++........ ....+.+ ..-+.+.|+.+++++ | ++ ..+|+++ +++|.+++.++.
T Consensus 7 f~pGP~~~~~~v~~a~~~~~~~~~--~~~hr~~~f~~~~~~~r~~l~~l~----~--~~~~~~v~f~~gs~T~a~~~~~~ 78 (361)
T TIGR01366 7 FGSGPSKVRLEQLQALTTTAASLF--GTSHRQAPVKNLVGRVREGLAELF----S--LPDGYEVILGNGGATAFWDAATF 78 (361)
T ss_pred ccCCCcCCCHHHHHHHHhcCcccc--ccCcCChHHHHHHHHHHHHHHHHh----C--CCCCceEEEECCchhHHHHHHHH
Confidence 345566789999888653211110 0111222 223556677777776 3 33 3478886 559999999999
Q ss_pred HHccCCCCEEEEcCCCch-HHHHHHHHc--CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCccc
Q 018147 209 LLIRSENDGILCPIPQYP-LYSASIALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (360)
Q Consensus 209 ~l~~~~gd~Vlv~~P~y~-~~~~~~~~~--g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~ 285 (360)
.++. + +.+++..-.|. .+...++.+ +.++..++.+... .++.+ +. +++++|.+++-.|.||.
T Consensus 79 ~l~~-~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~~~-----~~------~~~~lV~~~h~et~tG~ 143 (361)
T TIGR01366 79 GLIE-K-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPGS--APEPQ-----AD------PGVDVIAWAHNETSTGV 143 (361)
T ss_pred hccc-c-cccEEecCHHHHHHHHHHHhhhccCCceEEecCCCC--CCCCc-----cC------CCCCEEEEcccCCccce
Confidence 9873 3 34344444454 344444442 2356666654321 23321 22 27999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 286 VLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 286 ~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
+.+ +++| ++++|+++|+|.+-.-
T Consensus 144 ~~p---i~~I---~~~~g~~~iVDavqs~ 166 (361)
T TIGR01366 144 AVP---VRRP---EGSDDALVVIDATSGA 166 (361)
T ss_pred ecc---cccc---cccCCCeEEEEcCccc
Confidence 999 5555 4789999999998765
No 362
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.21 E-value=0.00013 Score=70.23 Aligned_cols=188 Identities=15% Similarity=0.147 Sum_probs=126.0
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHH-HHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCE
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRD-TIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~-~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~ 217 (360)
.+.+++++++.+.+...-. . .|.-..|...-|- .+++.+ .| -...+.++++++.+.|+..++.++.. +.+
T Consensus 38 ~~~~e~iea~~~~~~~~v~--L-e~~l~~g~~~~R~~~~~~~~---~~-~~~aea~~ivnnn~aAVll~~~al~~--~~E 108 (395)
T COG1921 38 LYSPEAIEAMKEAMRAPVE--L-ETDLKTGKRGARLTELAELL---CG-LTGAEAAAIVNNNAAAVLLTLNALAE--GKE 108 (395)
T ss_pred cCCHHHHHHHHHHhcccce--e-eeecccchhhHHHHHHHHHH---hc-ccchhheeeECCcHHHHHHHHhhhcc--CCe
Confidence 4588899988887776432 3 4444443333332 333333 22 23467899999999999999999873 444
Q ss_pred EEEcC-----CCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCC-CcccCCCHHH
Q 018147 218 ILCPI-----PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN-PTGQVLAEEN 291 (360)
Q Consensus 218 Vlv~~-----P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~N-PTG~~~~~~~ 291 (360)
|++.- +..++..+.++..|++++.+--.. .....+++.+|.+ ++++++-.+-+| +--..++
T Consensus 109 vVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~tn----~t~~~d~~~AIne------~ta~llkV~s~~~~f~~~l~--- 175 (395)
T COG1921 109 VVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTTN----RTHLKDYELAINE------NTALLLKVHSSNYGFTGMLS--- 175 (395)
T ss_pred EEEEccccccCCCCChhHHHHHcCCEEEEecccC----cCCHHHHHHHhcc------CCeeEEEEeecccccccccc---
Confidence 44332 577899999999999999985432 3578899999988 788776665444 3222334
Q ss_pred HHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc---ccccc
Q 018147 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF---HFFSK 359 (360)
Q Consensus 292 l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g---~~RvG 359 (360)
.++++++|+++|+++++|.+-+..+-. .+.+..++. ++ .| +++.|--|.++| |+-+|
T Consensus 176 ~~~l~~ia~~~~lpvivD~aSg~~v~~----e~~l~~~la-~G---aD---LV~~SgdKllgGPqaGii~G 235 (395)
T COG1921 176 EEELVEIAHEKGLPVIVDLASGALVDK----EPDLREALA-LG---AD---LVSFSGDKLLGGPQAGIIVG 235 (395)
T ss_pred HHHHHHHHHHcCCCEEEecCCcccccc----ccchhHHHh-cC---CC---EEEEecchhcCCCccceEec
Confidence 677899999999999999998776541 223333332 22 34 778899998875 55544
No 363
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.18 E-value=0.00011 Score=78.10 Aligned_cols=209 Identities=15% Similarity=0.130 Sum_probs=118.1
Q ss_pred CccccCcc----CCC--CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 018147 129 SILDRSET----QGL--FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (360)
Q Consensus 129 ~~l~~~~~----~~~--~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~a 202 (360)
.++|...+ ..+ -.+++.+++.+++..... ... ... ..+-...+|+.+.+.-+- -..+.|++++++++|
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~h--v~~--~~~-~hepa~~LAe~L~~~~~~-~~l~rVffs~sGSeA 439 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGH--VMF--PEN-VHEPALRAAELLLGGPGK-GWASRVFFSDNGSTA 439 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCc--ccc--Ccc-CCHHHHHHHHHHHhccCC-CCCCEEEECCchHHH
Confidence 47777666 223 489999999998887532 111 111 223445566666542110 013589999999999
Q ss_pred HHHHHHHHcc------C--------------CCCEEEEcCCCchHHHHHHHHcCCe---------E------EEe--ec-
Q 018147 203 VHMMMQLLIR------S--------------ENDGILCPIPQYPLYSASIALHGGT---------L------VPY--YL- 244 (360)
Q Consensus 203 l~~~~~~l~~------~--------------~gd~Vlv~~P~y~~~~~~~~~~g~~---------~------~~v--~~- 244 (360)
+..+++...+ + ...+|+.....|.+-...+...+.. . ..+ |.
T Consensus 440 vE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~ 519 (817)
T PLN02974 440 IEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTV 519 (817)
T ss_pred HHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcc
Confidence 9998886521 1 1345888888887533222222110 0 001 10
Q ss_pred -------------CC-------CCCcC-----CC------------HHHHHHHHHHHH--hcCCCccEEEEecC--CCCc
Q 018147 245 -------------DE-------ATGWG-----LE------------TSEVKKQLEAAK--AKGITVRALVVINP--GNPT 283 (360)
Q Consensus 245 -------------~~-------~~~~~-----~d------------~~~L~~~i~~~~--~~g~~~k~iil~~P--~NPT 283 (360)
.. +..|. .+ .+.+++.|++.. ..+.++. .+|..| +.--
T Consensus 520 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iA-AvI~EPviqGaG 598 (817)
T PLN02974 520 GMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIA-ALIIEPVLHGAG 598 (817)
T ss_pred ccccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEE-EEEEeccccCCC
Confidence 00 00010 00 134555554311 1123454 445555 5666
Q ss_pred ccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccccc
Q 018147 284 GQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYFHF 356 (360)
Q Consensus 284 G~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~ 356 (360)
|.++ +.+-+++|.++|++||+++|.||+..+|.-.+. ..... ..+..|| +-.++|+++||.
T Consensus 599 Gmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~--~fa~e-----~~gv~PD-----Ii~~gKgLtgG~ 660 (817)
T PLN02974 599 GMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGV--ESAWE-----LLGCKPD-----IACYAKLLTGGL 660 (817)
T ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccc--hhhHH-----hcCCCCC-----EEeecccccCCC
Confidence 7765 567799999999999999999999999755553 22211 1122377 456789999883
No 364
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.18 E-value=8.7e-05 Score=74.02 Aligned_cols=183 Identities=12% Similarity=0.099 Sum_probs=101.8
Q ss_pred CCCccccCcc-----CCCCCHHHHH--HHHHHHHcCCCC--CCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcC
Q 018147 127 HPSILDRSET-----QGLFSADSIE--RAWQILDQIPGR--ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTD 197 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~--~~~~~l~~~~~~--~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~ 197 (360)
...+||+..+ -.--+|.+++ ++.+.+...... ....|. .+....+++.+.+..+ +-..+.+++++
T Consensus 44 G~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~-----~~~~~~la~~l~~~~~-p~~~~~v~f~~ 117 (443)
T PRK08297 44 GRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVY-----TVEMARFVDTFARVLG-DPELPHLFFVD 117 (443)
T ss_pred CCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcC-----CHHHHHHHHHHHhhcC-CCCCCEEEEeC
Confidence 3456666544 2344778888 888777653210 011122 1233334444444321 11246899999
Q ss_pred ChHHHHHHHHHHHcc---------C---C-CCEEEEcCCCchHHHHHHHHc-CCeEE---EeecC-------CCCCc---
Q 018147 198 GASPAVHMMMQLLIR---------S---E-NDGILCPIPQYPLYSASIALH-GGTLV---PYYLD-------EATGW--- 250 (360)
Q Consensus 198 Ga~~al~~~~~~l~~---------~---~-gd~Vlv~~P~y~~~~~~~~~~-g~~~~---~v~~~-------~~~~~--- 250 (360)
++++|+..+++.... + + ..+|+...-.|.+....+... |.... .++.. +...+
T Consensus 118 SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (443)
T PRK08297 118 GGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLP 197 (443)
T ss_pred chHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCc
Confidence 999999999987621 1 1 256888888888665433322 21110 00100 00000
Q ss_pred --C---C------CHHHHHHHHHHHHhcCCCccEEEEecC-CCCcccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCcc
Q 018147 251 --G---L------ETSEVKKQLEAAKAKGITVRALVVINP-GNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVY 317 (360)
Q Consensus 251 --~---~------d~~~L~~~i~~~~~~g~~~k~iil~~P-~NPTG~~-~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~ 317 (360)
. . +++++++.+... ..++.+|+ ..| ..--|.+ .+.+.+++|.++|++||+++|.||++.+|..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~i~~~---~~~iAavI-~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGR 273 (443)
T PRK08297 198 GEDLEEVEALEAEALAQARAAFERH---PHDIACFI-AEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGL 273 (443)
T ss_pred ccccchhhHHHHHHHHHHHHHHHhC---CCcEEEEE-EccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCc
Confidence 0 0 234444555421 12455555 455 3333543 6778899999999999999999999998644
Q ss_pred CC
Q 018147 318 VP 319 (360)
Q Consensus 318 ~~ 319 (360)
.+
T Consensus 274 tG 275 (443)
T PRK08297 274 TG 275 (443)
T ss_pred cc
Confidence 43
No 365
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.14 E-value=0.00012 Score=70.17 Aligned_cols=150 Identities=17% Similarity=0.176 Sum_probs=107.0
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-CCC----------CEEEEc-CCCchH
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SEN----------DGILCP-IPQYPL 227 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-~~g----------d~Vlv~-~P~y~~ 227 (360)
...|.-..+.--..+.+-....+..||....|.|+--.|+...+..+..+--+ -|+ +-|+.. .-+|.+
T Consensus 130 ~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYS 209 (510)
T KOG0629|consen 130 MFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYS 209 (510)
T ss_pred CceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhh
Confidence 55565555555555666666666678887767888777888877776655321 122 335544 467778
Q ss_pred HHHHHHHcC---CeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCC
Q 018147 228 YSASIALHG---GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGL 304 (360)
Q Consensus 228 ~~~~~~~~g---~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i 304 (360)
...+++.+| -.++.|+.++.+ .+++++||+.|.+++++|..+-.|-.+--...-|+. +++..|+++|++|++
T Consensus 210 i~kaAa~lg~gtd~c~~v~t~e~G--km~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF---DdL~~iadiC~k~~l 284 (510)
T KOG0629|consen 210 IKKAAAFLGLGTDHCIKVKTDERG--KMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF---DDLNGIADICEKHKL 284 (510)
T ss_pred HHHHHHHhccCCceeEEecccccC--ccchHHHHHHHHHHHhcCCCCeEEEecCCceeeecc---CcHHHHHHHHHhcCE
Confidence 888888888 678888888775 799999999999988777544333322334455665 459999999999999
Q ss_pred EEEEccCCCC
Q 018147 305 VLLADEVYQE 314 (360)
Q Consensus 305 ~lI~DeaY~~ 314 (360)
|+.+|.||++
T Consensus 285 WmHvDAAwGG 294 (510)
T KOG0629|consen 285 WMHVDAAWGG 294 (510)
T ss_pred EEEeeccccc
Confidence 9999999988
No 366
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.13 E-value=0.0001 Score=70.40 Aligned_cols=209 Identities=13% Similarity=0.161 Sum_probs=120.8
Q ss_pred CCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 018147 128 PSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (360)
Q Consensus 128 p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~a 202 (360)
.+++|+.+. .....|++.+++.+....... ....|-... .-++.+.+.+.+ +-+ .++.|++++++|+|
T Consensus 56 ~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~h-s~~~~~t~e-av~l~~~l~~~~----~~~-~~~rvff~nsGTeA 128 (433)
T KOG1401|consen 56 KEYIDFTSSWAVTILGHANPEVARALAEQAKKLGH-SSNGYFTLE-AVELEEVLSAVL----GKG-SAERVFFCNSGTEA 128 (433)
T ss_pred ceeeeeccceeccccCCCCHHHHHHHHHHHhhhee-ccCccccHH-HHHHHHHHHhcc----cCC-CccEEEEecCCcHH
Confidence 345555444 334478888888877776532 122222211 223333333332 212 78899999999999
Q ss_pred HHHHHHHHcc-----CCCC--EEEEcCCCchHH-HHHHHHcCCeEEEeecC---CCC-Cc-CCCHHHHHHHHHHHHhcCC
Q 018147 203 VHMMMQLLIR-----SEND--GILCPIPQYPLY-SASIALHGGTLVPYYLD---EAT-GW-GLETSEVKKQLEAAKAKGI 269 (360)
Q Consensus 203 l~~~~~~l~~-----~~gd--~Vlv~~P~y~~~-~~~~~~~g~~~~~v~~~---~~~-~~-~~d~~~L~~~i~~~~~~g~ 269 (360)
...++....+ .+-+ .|+....+|.+- ..++...+......|.+ ++- .. --|...+++.++.+. |
T Consensus 129 ne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~--~- 205 (433)
T KOG1401|consen 129 NETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHK--G- 205 (433)
T ss_pred HHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCC--C-
Confidence 9999887542 1112 377777677643 33333333222222221 110 00 126889999888741 1
Q ss_pred CccEEEEecC-CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCCCCCceEEEEec
Q 018147 270 TVRALVVINP-GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQS 347 (360)
Q Consensus 270 ~~k~iil~~P-~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S 347 (360)
.+.+|| ..| +---|.+. +++.+..|.+.|+++++++|.||+..+|...+.. .. .+++ ..-|| +-+
T Consensus 206 ~IaAVI-vEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~--~a-~e~~----~~~PD-----I~t 272 (433)
T KOG1401|consen 206 EIAAVI-VEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYG--WA-QEYF----GVTPD-----ITT 272 (433)
T ss_pred ceEEEE-EecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchH--HH-HHHh----CcCCc-----cee
Confidence 244454 455 44444443 4678999999999999999999999986655431 11 1111 12367 577
Q ss_pred cCcCcccccccc
Q 018147 348 VSKGRYFHFFSK 359 (360)
Q Consensus 348 ~SK~~~g~~RvG 359 (360)
+.|.++||+-+|
T Consensus 273 ~aK~L~gGlPig 284 (433)
T KOG1401|consen 273 VAKPLGGGLPIG 284 (433)
T ss_pred ehhhccCCceeE
Confidence 889999998765
No 367
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.11 E-value=3.1e-05 Score=83.40 Aligned_cols=141 Identities=14% Similarity=0.073 Sum_probs=95.8
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCC--cC----cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSHS--QG----IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR 212 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~--~G----~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~ 212 (360)
.+|+.+++.+.+...-.. ..+.|.+. +| +.++++.++++. +++++++.++.|+|.+.+.++.++..
T Consensus 116 ~~P~~v~~~i~~~~~~~T--aytPYqaEisQG~lqal~~~Qt~ia~Lt------G~~~anaSL~d~aTAaaea~~~a~~~ 187 (993)
T PLN02414 116 HVPPVILRNILENPGWYT--QYTPYQAEIAQGRLESLLNYQTMITDLT------GLPMSNASLLDEGTAAAEAMAMCNNI 187 (993)
T ss_pred cCCHHHHHHHHhChHHHh--hcCCCchHHHHHHHHHHHHHHHHHHHHh------CCChhhEeecCChHHHHHHHHHHHhc
Confidence 356666677655433211 24455543 45 445566666665 57899999999999999988777643
Q ss_pred CC--CCEEEEcCCCchHHHHHHH----HcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccC
Q 018147 213 SE--NDGILCPIPQYPLYSASIA----LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (360)
Q Consensus 213 ~~--gd~Vlv~~P~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~ 286 (360)
.+ +|+|++++-.|+.+...++ ..|++++.++++.. + ...+ .+-.+++.+|+ -+|.+
T Consensus 188 ~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~------~v~~vlvq~P~-~~G~v 249 (993)
T PLN02414 188 LKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSG------DVCGVLVQYPA-TDGEV 249 (993)
T ss_pred ccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccC------ceEEEEEecCC-CCeEE
Confidence 33 4789999999998766554 45899998876431 1 0011 24344444554 48999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEE
Q 018147 287 LAEENQRAIVDFCKKEGLVLLA 308 (360)
Q Consensus 287 ~~~~~l~~i~~la~~~~i~lI~ 308 (360)
.+ +++|+++|+++|+++++
T Consensus 250 ~d---v~~I~~~ah~~GaL~iV 268 (993)
T PLN02414 250 LD---YAEFVKNAHANGVKVVM 268 (993)
T ss_pred cC---HHHHHHHHHHcCCEEEE
Confidence 87 99999999999999998
No 368
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.04 E-value=0.00039 Score=69.12 Aligned_cols=186 Identities=12% Similarity=0.058 Sum_probs=101.3
Q ss_pred CCCccccCcc-----CCCCCHHHH--HHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCCh
Q 018147 127 HPSILDRSET-----QGLFSADSI--ERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGA 199 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~--~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga 199 (360)
...+||+..+ -.--+|.++ +++.+.+..... ....... . .......+++.+.+..+ +-..+.+++++++
T Consensus 37 G~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~-~~~~~~~-~-~~~~~~~l~~~l~~~~~-~~~~~~v~f~~sG 112 (431)
T TIGR03251 37 GRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAV-NKPSNSD-V-YTVAMARFVDTFARVLG-DPALPHLFFIEGG 112 (431)
T ss_pred CCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhh-cccccCC-C-CCHHHHHHHHHHHHhcC-CCCcCEEEEeCCc
Confidence 4456666444 223467788 777777765320 0001101 1 12222334444433211 1124689999999
Q ss_pred HHHHHHHHHHHcc---------C-C---CCEEEEcCCCchHHHHHHHH-cCCe-EE--EeecC-------C-------CC
Q 018147 200 SPAVHMMMQLLIR---------S-E---NDGILCPIPQYPLYSASIAL-HGGT-LV--PYYLD-------E-------AT 248 (360)
Q Consensus 200 ~~al~~~~~~l~~---------~-~---gd~Vlv~~P~y~~~~~~~~~-~g~~-~~--~v~~~-------~-------~~ 248 (360)
++|+..+++.... + + +.+|+...-.|.+....... .|.. .. ..+.. + ..
T Consensus 113 sEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 192 (431)
T TIGR03251 113 ALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAP 192 (431)
T ss_pred HHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCcccc
Confidence 9999999887631 0 1 36799888888765443332 2211 00 01110 0 00
Q ss_pred CcC-------CCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCC
Q 018147 249 GWG-------LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (360)
Q Consensus 249 ~~~-------~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~-~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~ 319 (360)
.+. -+++++++.+.. .+.++.++++.-.+.-.|.+ .+.+.+++|.++|++||+++|+||++.++...+
T Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG 268 (431)
T TIGR03251 193 NLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTG 268 (431)
T ss_pred ccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccc
Confidence 000 013334444432 12256555554334445655 567889999999999999999999999865543
No 369
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.00 E-value=6.1e-05 Score=70.03 Aligned_cols=130 Identities=17% Similarity=0.249 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-CCCCEEEEcC-CCch----HHHHHHHHcCCeEEEee
Q 018147 170 KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SENDGILCPI-PQYP----LYSASIALHGGTLVPYY 243 (360)
Q Consensus 170 ~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-~~gd~Vlv~~-P~y~----~~~~~~~~~g~~~~~v~ 243 (360)
.++-+.+.+.+.... +..+++++++.+.+-.++.++.+.++ .+|++|++++ -+|+ .....++.++.. +.
T Consensus 75 ~~lp~~lgdklApLi--GA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~ 149 (407)
T COG3844 75 FDLPERLGDKLAPLI--GARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---YD 149 (407)
T ss_pred hhchhHHHHHhhhhh--cCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---cc
Confidence 344444444444433 36789999999999999988887764 3689999887 2333 223344444433 11
Q ss_pred cCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCcc
Q 018147 244 LDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317 (360)
Q Consensus 244 ~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~ 317 (360)
+. -.+.++++++++++ ++.+|++++.+.-||+.++ +.+|-.+++++|++++-|-+++.-..
T Consensus 150 ~~----~~~~P~~~~~~~~d------d~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGav 210 (407)
T COG3844 150 LE----GVIAPRALEEAITD------DVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAV 210 (407)
T ss_pred ce----eeeChHHHHHhhcc------ceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCCc
Confidence 11 14567899999988 7888888899999999999 99999999999999999999976433
No 370
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=97.98 E-value=0.0001 Score=71.17 Aligned_cols=167 Identities=17% Similarity=0.148 Sum_probs=103.6
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHcCCC--CCCCCCCC-CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHH
Q 018147 130 ILDRSETQGLFSADSIERAWQILDQIPG--RATGAYSH-SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMM 206 (360)
Q Consensus 130 ~l~~~~~~~~~p~~v~~~~~~~l~~~~~--~~~~~Y~~-~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~ 206 (360)
+++|+.||..+|++|++++.+.+.+... .+....++ +.-..++.+.+.+.+++.++.+-+-+=+++..|++.++..+
T Consensus 5 ~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~ 84 (364)
T PRK12462 5 QLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMI 84 (364)
T ss_pred cceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHH
Confidence 5688888999999999999877765321 11222222 12245566666667777667532222345566799999999
Q ss_pred HHHHccCCCCEEE--EcCCCch-HHHHHHHHcCCeEEEeecCCCCCc--CCCHHHHHHHHHHHHhcCCCccEEEEecCCC
Q 018147 207 MQLLIRSENDGIL--CPIPQYP-LYSASIALHGGTLVPYYLDEATGW--GLETSEVKKQLEAAKAKGITVRALVVINPGN 281 (360)
Q Consensus 207 ~~~l~~~~gd~Vl--v~~P~y~-~~~~~~~~~g~~~~~v~~~~~~~~--~~d~~~L~~~i~~~~~~g~~~k~iil~~P~N 281 (360)
...|+. +||+++ +..-.|. -+...++.+| ++..+......+| .+++++++ +.+ +.+.|.+++-..
T Consensus 85 ~~Nll~-~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~~------d~~~v~~t~NET 154 (364)
T PRK12462 85 PMNFSR-PGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAELD--WDA------RAPFRHYVSNET 154 (364)
T ss_pred HHHcCC-CCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHhc--cCC------CCcEEEEccCCC
Confidence 999995 899654 4455554 3455666676 4444432222222 34555542 111 567777777677
Q ss_pred CcccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 282 PTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 282 PTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
.||+.++ ++.+.++.++|+|.+=.-
T Consensus 155 stGv~~~--------~~~~~~~~llvvD~sS~~ 179 (364)
T PRK12462 155 VEGLQFP--------DAAGLPDSPLIADMSSDF 179 (364)
T ss_pred CceEecC--------cccccCCCeEEEEcCchh
Confidence 8899886 222336899999987554
No 371
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.93 E-value=0.00017 Score=77.92 Aligned_cols=129 Identities=18% Similarity=0.142 Sum_probs=91.1
Q ss_pred CCCCCC-----CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCC--CCEEEEcCCCchHHHHHH
Q 018147 160 TGAYSH-----SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE--NDGILCPIPQYPLYSASI 232 (360)
Q Consensus 160 ~~~Y~~-----~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~--gd~Vlv~~P~y~~~~~~~ 232 (360)
...|.| ++|..+..-.....+.+..| +++.++.+..+++.+.+.++.++...+ +|+|++++-.|+.+...+
T Consensus 105 ~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG--~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~ 182 (954)
T PRK05367 105 YTAYTPYQPEISQGRLEALLNFQTMVADLTG--LEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVL 182 (954)
T ss_pred hhccCCCChHHHHHHHHHHHHHHHHHHHHHC--CChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHH
Confidence 445555 44544433333333333334 678899999999999998887763234 489999999999877554
Q ss_pred ----HHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEE
Q 018147 233 ----ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (360)
Q Consensus 233 ----~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~ 308 (360)
+..|.+++.++.+.+ ++ .+ ++.++++.+| |-+|.+.+ +++|+++|+++|+++++
T Consensus 183 ~t~a~~~G~ev~~~~~~~d----~~--------~~------~~~~vlvq~p-~~~G~i~d---~~~i~~~ah~~Gal~~v 240 (954)
T PRK05367 183 RTRAEPLGIEVVVGDAAKA----LD--------HD------DVFGVLLQYP-GTSGEVRD---YTALIAAAHARGALVAV 240 (954)
T ss_pred HHHHHhCCCEEEEecCccC----CC--------cc------cEEEEEEecC-CCCeeecc---HHHHHHHHHHcCCEEEE
Confidence 557999999987532 11 11 4555666676 56999987 99999999999999999
Q ss_pred ccCC
Q 018147 309 DEVY 312 (360)
Q Consensus 309 DeaY 312 (360)
|...
T Consensus 241 da~~ 244 (954)
T PRK05367 241 AADL 244 (954)
T ss_pred Eehh
Confidence 8633
No 372
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=97.88 E-value=0.00018 Score=68.45 Aligned_cols=212 Identities=18% Similarity=0.176 Sum_probs=123.9
Q ss_pred CCCccccCcc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 018147 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (360)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~ 201 (360)
+..++|+-.+ -..-+|++++++.+.+....- ....|.... +.+|.+++++.+ +-+-+.+++++++++
T Consensus 49 G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H-~t~~~~~~p-i~~~Ae~L~s~~------P~~l~~vfF~nsGsE 120 (442)
T KOG1404|consen 49 GRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYH-TTSGYLNPP-IHDLAEALVSKL------PGDLKVVFFVNSGSE 120 (442)
T ss_pred CceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEE-eeccccCCc-HHHHHHHHHHhC------CCCceEEEEecCCch
Confidence 3445555444 335688899998887754322 355677665 678888888776 334456899999999
Q ss_pred HHHHHHHHHcc--CCCCEEEEcCCCchHH-HHHHHHcCCeEEEeecCC--------------CCCcCCC-----HHHHHH
Q 018147 202 AVHMMMQLLIR--SENDGILCPIPQYPLY-SASIALHGGTLVPYYLDE--------------ATGWGLE-----TSEVKK 259 (360)
Q Consensus 202 al~~~~~~l~~--~~gd~Vlv~~P~y~~~-~~~~~~~g~~~~~v~~~~--------------~~~~~~d-----~~~L~~ 259 (360)
|..+++..... +.- .|+--..+|... ...+-.-|......+... ..-|+=+ .+.+.+
T Consensus 121 ANelal~mar~Yt~~~-diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~ 199 (442)
T KOG1404|consen 121 ANELALKMARLYTGNL-DIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAK 199 (442)
T ss_pred HHHHHHHHHHHhcCCc-eEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHH
Confidence 99998876532 233 444444555533 323332232222211110 0111111 333444
Q ss_pred HHHHHH-hcCCCccEEEEecC-CCCcccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCHHHHHHhhCCC
Q 018147 260 QLEAAK-AKGITVRALVVINP-GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (360)
Q Consensus 260 ~i~~~~-~~g~~~k~iil~~P-~NPTG~~~-~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~~~~~~~~~~~ 336 (360)
.+++.. ..++..-+-+|..+ +--.|.+- ++--+++..++|+++|.++|.||+..+|...+. ++.|.+. +-
T Consensus 200 ~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~--~wgfe~h-----~v 272 (442)
T KOG1404|consen 200 ELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGH--MWGFESH-----GV 272 (442)
T ss_pred HHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccc--ccccccc-----CC
Confidence 333322 22334445566655 44445443 445799999999999999999999999766553 5555432 11
Q ss_pred CCCceEEEEeccCcCcccccccc
Q 018147 337 EKDISLVSFQSVSKGRYFHFFSK 359 (360)
Q Consensus 337 ~~~~~~i~~~S~SK~~~g~~RvG 359 (360)
-|| +-+++|+++.|.-+|
T Consensus 273 ~PD-----IvTmAKgiGnG~Pl~ 290 (442)
T KOG1404|consen 273 VPD-----IVTMAKGIGNGFPLG 290 (442)
T ss_pred Ccc-----HHHHHhhccCCCcce
Confidence 255 578888888776554
No 373
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=97.81 E-value=6.7e-06 Score=78.25 Aligned_cols=193 Identities=15% Similarity=0.128 Sum_probs=27.9
Q ss_pred cCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHH-HHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCC
Q 018147 136 TQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLR-DTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE 214 (360)
Q Consensus 136 ~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr-~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~ 214 (360)
+...+++++++++.+...... ...|.-..|-..-| ..+.+.+.+. ...+..+++++...|+.+++..++ .
T Consensus 14 GRs~l~~~a~~a~~~~a~~Y~---nLE~dl~~G~Rg~R~~~v~~ll~~l----tgAeaA~VvNnnaAAv~L~l~~la--~ 84 (367)
T PF03841_consen 14 GRSPLSEEAIEAVAEVASGYS---NLEYDLETGKRGSRYAHVEELLCEL----TGAEAALVVNNNAAAVLLALNTLA--K 84 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccc---ccccccccccccccccccccccccc----cccccccccccccccccccccccc--c
Confidence 333557778887766554431 33443333322222 2233333322 246778888888999999999986 5
Q ss_pred CCEEEEcCCCch------HHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCC
Q 018147 215 NDGILCPIPQYP------LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (360)
Q Consensus 215 gd~Vlv~~P~y~------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~ 288 (360)
|.+|++..-.-. .+.++++..|++++.|-... ...+++++++|++ ++.+++-.|++|-.-.-++
T Consensus 85 ~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN----~t~~~Dye~AI~e------~Ta~ll~Vh~Sn~~i~GFt 154 (367)
T PF03841_consen 85 GKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN----RTHLSDYEKAITE------NTAALLKVHTSNFRIQGFT 154 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccc----ccccccccccccc------ccccccccccccccccccc
Confidence 677776652222 35677888999999886542 4468889999998 7988888898886322111
Q ss_pred -HHHHHHHHHHHHHcCCEEEEccCCCCCcc---CCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 289 -EENQRAIVDFCKKEGLVLLADEVYQENVY---VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 289 -~~~l~~i~~la~~~~i~lI~DeaY~~~~~---~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
.-.++++++++++|++++|+|-.-+.+.- -+-.+.+++..++. .+ .| +++.|--|.++|
T Consensus 155 ~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~-~G---aD---lV~fSGdKlLGG 217 (367)
T PF03841_consen 155 GEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLA-AG---AD---LVTFSGDKLLGG 217 (367)
T ss_dssp ------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCC-CT----S---EEEEETTSSSSS
T ss_pred ccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhh-cC---CC---EEEEECCCcCCC
Confidence 22589999999999999999977633211 00001223333321 11 23 778899998876
No 374
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=97.80 E-value=0.00019 Score=69.89 Aligned_cols=127 Identities=11% Similarity=-0.002 Sum_probs=87.6
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchH-HH-HHHHHcCC-eEEEeecC
Q 018147 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL-YS-ASIALHGG-TLVPYYLD 245 (360)
Q Consensus 169 ~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~-~~-~~~~~~g~-~~~~v~~~ 245 (360)
..++-+.+.+.+++.++.+-+.+-++++.|+|.++..++..++..+||.|++.. .|.. +. .+++.+|. ++..+...
T Consensus 37 F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~~ 115 (374)
T TIGR01365 37 GKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEAE 115 (374)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcCC
Confidence 466666666677776664322223566899999999999999833889999876 5553 34 78888999 46766544
Q ss_pred CCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 246 EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 246 ~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
.. -.+++++++. + +.|+++|--..||+..+ +++++..+ ++.++|+|.+=.-
T Consensus 116 ~g--~~~~~~~ve~----------~-~~v~~vhnETSTGv~np---v~~i~~~~--~~~lliVDavSs~ 166 (374)
T TIGR01365 116 YG--KLPDLKKVDF----------K-NDVVFTWNGTTSGVRVP---NGDFIPAD--REGLTICDATSAA 166 (374)
T ss_pred CC--CCCCHHHcCC----------C-CCEEEecCCCchheecc---cccccccc--CCCcEEEEccchh
Confidence 33 2678888872 1 12667777778999998 44544322 4899999987654
No 375
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=97.80 E-value=0.00016 Score=67.39 Aligned_cols=161 Identities=17% Similarity=0.234 Sum_probs=97.2
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc----
Q 018147 137 QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR---- 212 (360)
Q Consensus 137 ~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~---- 212 (360)
....+|.+++++.+..+.....+...|.+- ..++.+ ++...+| -+.++-++-+.+|...++....+
T Consensus 73 qGhchpki~~aLqeq~~kLtlssrafYnd~--~~~f~~----~vt~lf~----~~kvlpmnTGaEa~Eta~KLaR~wgy~ 142 (427)
T KOG1402|consen 73 QGHCHPKIIKALQEQADKLTLSSRAFYNDV--LGEFAE----YVTKLFG----YDKVLPMNTGAEAVETACKLARKWGYR 142 (427)
T ss_pred cCCCCHHHHHHHHHHHhHhhhhhHHHhhhh--HHHHHH----HHHHhcC----cceeeecccchhHHHHHHHHHHHHHHh
Confidence 345688999999887776432122234332 234444 4444444 35677777778999888876541
Q ss_pred -C--CCCE--EEEcCCCchHHH-H---------HHHHcC----CeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccE
Q 018147 213 -S--ENDG--ILCPIPQYPLYS-A---------SIALHG----GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRA 273 (360)
Q Consensus 213 -~--~gd~--Vlv~~P~y~~~~-~---------~~~~~g----~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~ 273 (360)
. |.++ |+.....|.+-. . ..+.+| ..+..+|. -|.++|+.+++. +++.+
T Consensus 143 ~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-------~d~eale~~l~~-----~~vaa 210 (427)
T KOG1402|consen 143 KKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-------GDAEALEVALKS-----PNVAA 210 (427)
T ss_pred hccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-------CCHHHHHHHhcC-----CCeeE
Confidence 1 3232 333333333211 0 111111 00111111 168889988876 25554
Q ss_pred EEEecC-CCCcccCCCHH-HHHHHHHHHHHcCCEEEEccCCCCCccCCC
Q 018147 274 LVVINP-GNPTGQVLAEE-NQRAIVDFCKKEGLVLLADEVYQENVYVPE 320 (360)
Q Consensus 274 iil~~P-~NPTG~~~~~~-~l~~i~~la~~~~i~lI~DeaY~~~~~~~~ 320 (360)
.+ ..| +-.-|++.|.+ -++++.++|++||+++|.||+..++...+.
T Consensus 211 Fi-vEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk 258 (427)
T KOG1402|consen 211 FI-VEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGK 258 (427)
T ss_pred EE-eeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCc
Confidence 44 555 88889888765 599999999999999999999999877664
No 376
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=97.77 E-value=0.00012 Score=70.94 Aligned_cols=140 Identities=16% Similarity=0.146 Sum_probs=110.7
Q ss_pred cCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc---C----CCCEEEEcCCCchHHHHHHHHcCCeE
Q 018147 167 QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR---S----ENDGILCPIPQYPLYSASIALHGGTL 239 (360)
Q Consensus 167 ~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~---~----~gd~Vlv~~P~y~~~~~~~~~~g~~~ 239 (360)
.+...+..++.+.+...++-+ ....=..|.|+++++..+...... . ....++++.-.+..+...++..+.++
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~-~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l 194 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAP-SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVEL 194 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCC-ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEE
Confidence 356778888888888877644 222236688999985554443211 1 12346777778888999999999999
Q ss_pred EEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHH-cCCEEEEccCCCCCcc
Q 018147 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK-EGLVLLADEVYQENVY 317 (360)
Q Consensus 240 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~-~~i~lI~DeaY~~~~~ 317 (360)
..+++++ ++|.+|+.++.+.+.+ ++.+++..-|+-|+|.+ |++++|.+++.+ +++.+.+|.+-+.|+-
T Consensus 195 ~~V~~~~-~~~~~D~~k~~~~i~e------Nti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~ 263 (491)
T KOG1383|consen 195 REVPLDE-GDYRVDPGKVVRMIDE------NTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFIN 263 (491)
T ss_pred Eeeeccc-cceEecHHHHHHHhcc------ceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccccc
Confidence 9999997 4799999999999998 89999999999999976 569999999988 9999999999999876
No 377
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.75 E-value=0.00068 Score=63.97 Aligned_cols=165 Identities=21% Similarity=0.327 Sum_probs=115.0
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc----CCCCEEEEcCCCch-HHHHHHHH
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR----SENDGILCPIPQYP-LYSASIAL 234 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~----~~gd~Vlv~~P~y~-~~~~~~~~ 234 (360)
.-.|+-+.+...|++++.+.+ |+ +.++-|.-+..|=++++..+++ .||....+++..|. ......+.
T Consensus 72 DEAYagsrs~~~L~~avkdif----Gf----q~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ 143 (471)
T COG3033 72 DEAYAGSRSYYALADAVKDIF----GF----QYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQI 143 (471)
T ss_pred chhhcccccHHHHHHHHHHhc----Cc----eeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHh
Confidence 446888888999999998876 43 5677777667776777776664 24544455555554 44555677
Q ss_pred cCCeEEEeecCCCCC--------cCCCHHHHHHHHHHHHhcCCCccEEEEe-cCCCCcccCCCHHHHHHHHHHHHHcCCE
Q 018147 235 HGGTLVPYYLDEATG--------WGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLV 305 (360)
Q Consensus 235 ~g~~~~~v~~~~~~~--------~~~d~~~L~~~i~~~~~~g~~~k~iil~-~P~NPTG~~~~~~~l~~i~~la~~~~i~ 305 (360)
.|+.++-++.++..+ -.+|++.|++.|++...+ ++..|+++ .-|.-.|+-.|.+.++++.++|++|++.
T Consensus 144 ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~--nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ip 221 (471)
T COG3033 144 NGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGAD--NVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIP 221 (471)
T ss_pred cCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcc--cCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCc
Confidence 898888887765322 137999999999875332 45566666 4455689999999999999999999999
Q ss_pred EEEccC-CCCCccC-----CCCCCCCHHHHHHhhC
Q 018147 306 LLADEV-YQENVYV-----PEKKFHSFKKVSRSMG 334 (360)
Q Consensus 306 lI~Dea-Y~~~~~~-----~~~~~~s~~~~~~~~~ 334 (360)
++.|.+ |.+..|- ..-...|+..+..+|-
T Consensus 222 vv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~ 256 (471)
T COG3033 222 VVMDAARFAENAYFIKQREPGYRDWSIEEIAREMY 256 (471)
T ss_pred EEeehhhhhhhhhhhhhcCcccccccHHHHHHHHH
Confidence 999965 3444331 1114667777776654
No 378
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.70 E-value=0.00038 Score=67.36 Aligned_cols=166 Identities=14% Similarity=0.111 Sum_probs=105.6
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCC
Q 018147 168 GIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEA 247 (360)
Q Consensus 168 G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~ 247 (360)
|..++.+.+.+...+..| .++.+++..| -..-...+-.|+ ++|.-|+-..-.+......++.-|+.++.+..+
T Consensus 179 G~~~~hkelE~l~A~f~g---~e~a~vF~mG-f~TNs~~~p~l~-~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN-- 251 (519)
T KOG1357|consen 179 GTTEEHKELEELVARFLG---VEDAIVFSMG-FATNSMNIPSLL-GKGSLIISDELNHASLITGARLSGATTRVFRHN-- 251 (519)
T ss_pred ccHHHHHHHHHHHHHhcC---CcceEEEecc-ccccccCcceee-cCCcceeeccccchheeccccccCceEEEEecC--
Confidence 444444444444444445 4677888877 333344556677 599888888899999988899999998887654
Q ss_pred CCcCCCHHHHHHHHHHHHhcC-CCc-----cEEEEe-cCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCC
Q 018147 248 TGWGLETSEVKKQLEAAKAKG-ITV-----RALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPE 320 (360)
Q Consensus 248 ~~~~~d~~~L~~~i~~~~~~g-~~~-----k~iil~-~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~~ 320 (360)
|+..||+.|+++...| +++ |.+++. .--.--|.+.. +.+++.+++++..+++.||++.--..+..
T Consensus 252 -----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vvalkkkykayl~lDEAHSiGA~g~t 323 (519)
T KOG1357|consen 252 -----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVALKKKYKAYLYLDEAHSIGAMGAT 323 (519)
T ss_pred -----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHHhhccccEEEEeeccccccccCCC
Confidence 6888999888876544 121 233333 22223344444 89999999999999999999987544321
Q ss_pred CCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 321 KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 321 ~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
.. ..-.+ .+... .+ --|..++|.|+|++
T Consensus 324 Gr--gvce~-~g~d~--~d-vDImMGtftKSfga 351 (519)
T KOG1357|consen 324 GR--GVCEY-FGVDP--ED-VDIMMGTFTKSFGA 351 (519)
T ss_pred Cc--ceeec-cCCCc--hh-heeecceehhhccc
Confidence 10 10000 01111 22 24788999998864
No 379
>PLN02452 phosphoserine transaminase
Probab=97.65 E-value=0.0008 Score=65.37 Aligned_cols=167 Identities=14% Similarity=0.055 Sum_probs=105.1
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHcCCC--CCCCCCCC-CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHH
Q 018147 130 ILDRSETQGLFSADSIERAWQILDQIPG--RATGAYSH-SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMM 206 (360)
Q Consensus 130 ~l~~~~~~~~~p~~v~~~~~~~l~~~~~--~~~~~Y~~-~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~ 206 (360)
.++|+.||..+|++|++++.+.+.+... .+....++ +.-..++.+.+.+.+++.++.+-+-+-+++..|++.++..+
T Consensus 8 ~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~ 87 (365)
T PLN02452 8 VFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAI 87 (365)
T ss_pred eEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHH
Confidence 4677788889999999998776543211 01111211 22245666666666766666432223356678899999999
Q ss_pred HHHHccCCCCEEEEcCCCchH--HHHHHHHcCCeEEEeecCCCCCc--CCCHHHHHHHHHHHHhcCCCccEEEEecCCCC
Q 018147 207 MQLLIRSENDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGW--GLETSEVKKQLEAAKAKGITVRALVVINPGNP 282 (360)
Q Consensus 207 ~~~l~~~~gd~Vlv~~P~y~~--~~~~~~~~g~~~~~v~~~~~~~~--~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NP 282 (360)
...|+. +|+++++..-...+ +...++.+|...+..... ..+| .+++++++. .++.+.|.+++-...
T Consensus 88 ~~nl~~-~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~v~~~hnETs 157 (365)
T PLN02452 88 PLNLCK-PGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGK-DEKYTKIPSVSEWEL--------TPDAKFVHICANETI 157 (365)
T ss_pred HHhcCC-CCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecC-CCCCCCCCChHHcCC--------CCCCcEEEECCCCCC
Confidence 999995 89988887766543 456677788644433211 2222 356666522 125778888887788
Q ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 283 TG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
||+.+. +++++. ++++|+|.+-.-
T Consensus 158 tGv~~~--~~~~i~------~~~lvVDa~Ss~ 181 (365)
T PLN02452 158 HGVEFK--DYPDVG------NVPLVADMSSNF 181 (365)
T ss_pred CcEecC--cccccC------CCeEEEECCccc
Confidence 999643 244443 389999988654
No 380
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.60 E-value=0.0019 Score=61.55 Aligned_cols=174 Identities=16% Similarity=0.150 Sum_probs=120.3
Q ss_pred CCCccccCcc---CCCCCHHHHHHHHHHHHcCCC---CCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 018147 127 HPSILDRSET---QGLFSADSIERAWQILDQIPG---RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (360)
Q Consensus 127 ~p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~---~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~ 200 (360)
..+++|+.++ ...-.+++.+.+...++..+- .-.+-|+...-...+.+.||+|+ | .++.|+...|-
T Consensus 93 G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~----G---~E~aivYs~gF- 164 (467)
T KOG1358|consen 93 GKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM----G---TEDAIVYSYGF- 164 (467)
T ss_pred CceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh----C---Ccceeeecccc-
Confidence 4456666655 456677888888888887632 11234776666778899999998 3 35667766664
Q ss_pred HHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHH---hcCC---CccEE
Q 018147 201 PAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK---AKGI---TVRAL 274 (360)
Q Consensus 201 ~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~---~~g~---~~k~i 274 (360)
.++..++.++++ .||-|.+..-........++...-.++.+.. .|+++|+..+.+.. +|.+ .++-.
T Consensus 165 ~ti~S~ipafsK-rGDIi~~de~~nfaIq~GlqlSRS~i~~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~~Rrf 236 (467)
T KOG1358|consen 165 STIESAIPAFSK-RGDIIFVDEAVNFAIQKGLQLSRSTISYFKH-------NDMEDLERLLPEQEDEDQKNPKKALTRRF 236 (467)
T ss_pred chhhhcchhhhc-cCcEEEEehhhhHHHHHHHhhhhheeEEecC-------CCHHHHHHhccCcchhhhhccccccceEE
Confidence 566777889985 9999998887777888777777666666542 36777766653321 1211 23333
Q ss_pred EEe-cCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCC
Q 018147 275 VVI-NPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (360)
Q Consensus 275 il~-~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~ 319 (360)
++. ----+||.+.+ +.+|+++..+|...||.||.|+--+.+.
T Consensus 237 iv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~ 279 (467)
T KOG1358|consen 237 IVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGK 279 (467)
T ss_pred EEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccc
Confidence 333 33456899999 9999999999999999999998765553
No 381
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.60 E-value=0.00029 Score=68.37 Aligned_cols=145 Identities=19% Similarity=0.282 Sum_probs=101.6
Q ss_pred cCcHHHHHHHHHHHHhhcCCCC--------CCCCEEEcCChHHHHHHHHHHH-c----c-CCC-----------C-EEEE
Q 018147 167 QGIKGLRDTIAAGIEARDGFPA--------DPNDIFLTDGASPAVHMMMQLL-I----R-SEN-----------D-GILC 220 (360)
Q Consensus 167 ~G~~~lr~~ia~~l~~~~g~~~--------~~~~I~~t~Ga~~al~~~~~~l-~----~-~~g-----------d-~Vlv 220 (360)
.-..+|..-+-+|+.+..+.+. +.-.|+-.+. +++...++.+. . + +.+ + .+++
T Consensus 109 Pa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~ta-ses~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~ 187 (511)
T KOG0628|consen 109 PACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTA-SESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYC 187 (511)
T ss_pred cchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCc-chhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEe
Confidence 3478999999999988776541 1223444443 34433333221 1 0 112 1 2567
Q ss_pred cCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHH
Q 018147 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (360)
Q Consensus 221 ~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~ 300 (360)
.+-.+.+...++...|++...++.++ +|+++.+.|+++|++..+.|--+ .+++.+-+. || +-.-+++.+|..+|+
T Consensus 188 SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIP-f~v~at~GT-T~-~ca~D~l~elg~Vc~ 262 (511)
T KOG0628|consen 188 SDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIP-FFVCATLGT-TS-SCAFDELEELGPVCR 262 (511)
T ss_pred cCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCcc-EEEEEeecC-cc-ccccccHHHhcchhh
Confidence 77889999999999999999998876 69999999999999988877433 444444431 22 334578999999999
Q ss_pred HcCCEEEEccCCCCCcc
Q 018147 301 KEGLVLLADEVYQENVY 317 (360)
Q Consensus 301 ~~~i~lI~DeaY~~~~~ 317 (360)
++|+|+.+|.+|.+-.+
T Consensus 263 ~~glWLHVDAAYAGsa~ 279 (511)
T KOG0628|consen 263 EEGLWLHVDAAYAGSAF 279 (511)
T ss_pred hcCEEEEeehhhccccc
Confidence 99999999999997544
No 382
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=97.39 E-value=0.0018 Score=62.45 Aligned_cols=134 Identities=13% Similarity=0.123 Sum_probs=81.6
Q ss_pred HHHHHHHhhcCCCCCCCCEEEcCChHH-HHHHHHHHHc-cCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCC-CCcC
Q 018147 175 TIAAGIEARDGFPADPNDIFLTDGASP-AVHMMMQLLI-RSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEA-TGWG 251 (360)
Q Consensus 175 ~ia~~l~~~~g~~~~~~~I~~t~Ga~~-al~~~~~~l~-~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~ 251 (360)
.++.-+-+..|.. +....++++.+|. .+.+.+.++. +..++.|+.+.-.+......+..+|.+++.++...+ +...
T Consensus 60 ~l~~d~~~~~G~~-~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~ 138 (389)
T PF05889_consen 60 SLVLDALRLAGLR-SVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELI 138 (389)
T ss_dssp HHHHHHHHHTTHT-THCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEE
T ss_pred HHHHHHHHHcCCc-cccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeee
Confidence 3333333445643 2345667665543 3344444442 246788998887766666677889999999885332 3345
Q ss_pred CCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 252 LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 252 ~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
.|.+.+++.+++. |....+.++++++---|.. .|++++|+++|++||+..|+..||+-
T Consensus 139 td~~~ie~~i~~~---G~~~iLcvltttscfapr~--~D~i~~IakiC~~~~IPhlvNnAYgv 196 (389)
T PF05889_consen 139 TDLEAIEAKIEEL---GADNILCVLTTTSCFAPRL--PDDIEEIAKICKEYDIPHLVNNAYGV 196 (389)
T ss_dssp EHHHHHHHHHHHH---CGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTT
T ss_pred ccHHHHHHHHHHh---CCCCeEEEEEecCccCCCC--CccHHHHHHHHHHcCCceEEccchhh
Confidence 5788899888653 4455677777764333443 34799999999999999999999986
No 383
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=97.06 E-value=0.011 Score=63.40 Aligned_cols=142 Identities=15% Similarity=0.184 Sum_probs=91.5
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCC-----CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHc--
Q 018147 139 LFSADSIERAWQILDQIPGRATGAYSH-----SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI-- 211 (360)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~-----~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~-- 211 (360)
..|+.+.+.+. +.+. -...|.| ++|..+..=.....+.+.-| .+..|.-+..+++.+...++.+..
T Consensus 77 ~~p~~i~r~v~----~~p~-~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtG--m~~aNaSl~d~atA~aEa~~~a~~~~ 149 (939)
T TIGR00461 77 ILPPVIQRNLL----ENPG-WYTAYTPYQPEISQGRLEALLNFQTVVSDLTG--LPVANASLLDEGTAAAEAMALSFNVS 149 (939)
T ss_pred cCChHHHHHHH----hCch-hhhcCCCCChhhhhHHHHHHHHHHHHHHHHHC--CChhhhhccchhhHHHHHHHHHHHhh
Confidence 44665554433 2221 1345555 44544443334444444445 456677888888888776666542
Q ss_pred cCCCCEEEEcCCCchHHHHHHH----HcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCC
Q 018147 212 RSENDGILCPIPQYPLYSASIA----LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (360)
Q Consensus 212 ~~~gd~Vlv~~P~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~ 287 (360)
++.+++|++++-.||.+..+++ ..|.+++.++ +++|++.+ ++.++++.+|+. +|.+.
T Consensus 150 ~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~----------~~~l~~~~--------~~~~v~~q~Pn~-~G~ie 210 (939)
T TIGR00461 150 KKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD----------CSDIKKAV--------DVFGCLLQYPAT-DGSIL 210 (939)
T ss_pred cCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc----------HHHHhhcC--------CEEEEEEECCCC-CeEEe
Confidence 1234899999999988776655 6788888763 34454433 366777888874 78886
Q ss_pred CHHHHHHHHHHHHHcCCEEEEc
Q 018147 288 AEENQRAIVDFCKKEGLVLLAD 309 (360)
Q Consensus 288 ~~~~l~~i~~la~~~~i~lI~D 309 (360)
++++|+++++++|.+++++
T Consensus 211 ---d~~~i~~~~h~~gal~~~~ 229 (939)
T TIGR00461 211 ---DYKQLIDALHSHKSLVSVA 229 (939)
T ss_pred ---cHHHHHHHHHHcCCEEEEE
Confidence 4999999999999998884
No 384
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=96.71 E-value=0.019 Score=56.53 Aligned_cols=121 Identities=23% Similarity=0.274 Sum_probs=76.8
Q ss_pred CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHc--cCCCCEEEEcCCCchHHHHHHHH----cCCeE
Q 018147 166 SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI--RSENDGILCPIPQYPLYSASIAL----HGGTL 239 (360)
Q Consensus 166 ~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~--~~~gd~Vlv~~P~y~~~~~~~~~----~g~~~ 239 (360)
++|..+..-.....+.+.-|.+ .-+.-+-.|++.+-..++.+.. +..+++|+++.-.+|.+..+++. .|.++
T Consensus 105 sQG~Lq~lfe~Qs~i~eLTGmd--vaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~i 182 (429)
T PF02347_consen 105 SQGRLQALFEYQSMICELTGMD--VANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEI 182 (429)
T ss_dssp BHHHHHHHHHHHHHHHHHHTSS--EE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCC--ccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEE
Confidence 5676655555556666655654 2344555666655554443321 12346999999999988886655 58999
Q ss_pred EEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEE
Q 018147 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (360)
Q Consensus 240 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~ 308 (360)
+.+++++++ ..| .+ ++.+|++.+|+. .|.+-+ +++|.++++++|.++++
T Consensus 183 v~~~~~~~~--~~d--------~~------~~a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~gal~~~ 231 (429)
T PF02347_consen 183 VEVPLDEDG--TTD--------DD------DTAAVMVQNPNT-FGVFED---IKEIADIAHAAGALVIV 231 (429)
T ss_dssp EEE-BBTTC--SB---------ST------TEEEEEEESS-T-TSB--T---HHHHHHHHHHTT-EEEE
T ss_pred EEecccccC--Ccc--------cc------CeEEEEeecCCC-CceEee---HHHHHHHHHHcCCEEEE
Confidence 999988663 233 22 799999999985 587755 99999999999988876
No 385
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=96.40 E-value=0.15 Score=49.53 Aligned_cols=104 Identities=18% Similarity=0.267 Sum_probs=71.7
Q ss_pred CCCCEEEcCChHHHHHHHHHHHcc--CCCCEEEEcCCCchHHHHHHHHc----CCeEEEeecCCCCCcCCCHHHHHHHHH
Q 018147 189 DPNDIFLTDGASPAVHMMMQLLIR--SENDGILCPIPQYPLYSASIALH----GGTLVPYYLDEATGWGLETSEVKKQLE 262 (360)
Q Consensus 189 ~~~~I~~t~Ga~~al~~~~~~l~~--~~gd~Vlv~~P~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~L~~~i~ 262 (360)
+-.|--+-.++|.+-..++.+... .+..+|+++.-.|+.+..+++.+ |.+++.++.+ |.++|+++ .
T Consensus 136 ~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~-~ 207 (450)
T COG0403 136 DVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESA-D 207 (450)
T ss_pred CcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhc-c
Confidence 334455556666655555444321 24689999999999998887764 5666666544 67777776 3
Q ss_pred HHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEE
Q 018147 263 AAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (360)
Q Consensus 263 ~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~ 308 (360)
.. .+-++++.+|+ -.|. ..+++.+|.+.++++|.++++
T Consensus 208 ~~-----~~~gv~vQyP~-~~G~--~~~d~~~l~~~~h~~~al~~v 245 (450)
T COG0403 208 DG-----DVFGVLVQYPN-TFGI--VEEDLRALIEAAHSAGALVIV 245 (450)
T ss_pred cc-----CeEEEEEecCC-CCCc--cchhHHHHHHHHhhcCCEEEE
Confidence 31 67889988887 4563 345799999999999876654
No 386
>PLN02672 methionine S-methyltransferase
Probab=96.22 E-value=0.056 Score=59.13 Aligned_cols=148 Identities=13% Similarity=0.139 Sum_probs=98.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-----CCCCEEEE
Q 018147 146 ERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-----SENDGILC 220 (360)
Q Consensus 146 ~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-----~~gd~Vlv 220 (360)
..+...+.+. ....|.++.|...+|..||.|++..+++++++++|++.+.-..|+..+++.+.- +.+.+-.+
T Consensus 408 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (1082)
T PLN02672 408 AYLASALKGL---SYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWL 484 (1082)
T ss_pred HHHHHHHccC---CCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccC
Confidence 3344445443 477899999999999999999999999999999999999999999999887631 22322222
Q ss_pred cCCCchHHHHHHHHcCC-------eEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHH
Q 018147 221 PIPQYPLYSASIALHGG-------TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQR 293 (360)
Q Consensus 221 ~~P~y~~~~~~~~~~g~-------~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~ 293 (360)
| .-|...+...|. ..+.|--.+. ..+.+.+.+++. ++++|+..--+ +-..+...++
T Consensus 485 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~ 547 (1082)
T PLN02672 485 P----KKWLTSLAIENATSDSKSDDVITVIEAPR-----QSDLVIELIKKL-----KPQVVVTGMAD---FEMRTSTAFE 547 (1082)
T ss_pred C----HHHHhHhhhhcccccCccCCeEEEEeCCC-----cchHHHHHHHhC-----CCeEEEEeccc---hhhhhHHHHH
Confidence 1 233333333331 1112111111 123566667664 77777754322 3344556789
Q ss_pred HHHHHHHHcCCEEEEccCCC
Q 018147 294 AIVDFCKKEGLVLLADEVYQ 313 (360)
Q Consensus 294 ~i~~la~~~~i~lI~DeaY~ 313 (360)
.|++.+++.|.+++.|+.-.
T Consensus 548 ~~~~~~~~~~~~~~~~~~~~ 567 (1082)
T PLN02672 548 HLLNVTAEIGARLFLDISDH 567 (1082)
T ss_pred HHHHHHHhhCcEEEEehhhh
Confidence 99999999999999997643
No 387
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=95.95 E-value=0.14 Score=52.21 Aligned_cols=141 Identities=23% Similarity=0.330 Sum_probs=99.9
Q ss_pred CCCCCC---CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcC--Ch---HHHHHHHHHHHccCCCC----EEEEcCCCchH
Q 018147 160 TGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLTD--GA---SPAVHMMMQLLIRSEND----GILCPIPQYPL 227 (360)
Q Consensus 160 ~~~Y~~---~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~--Ga---~~al~~~~~~l~~~~gd----~Vlv~~P~y~~ 227 (360)
.+.|.| .+|+.++-+.+.+++.+.-|+ |.+.+-+ |+ -.++. ++++.....|+ .-++|.-.+..
T Consensus 568 IHPF~P~eQaqGY~~lf~~Le~~Lc~iTG~----D~~s~QPNsGA~GEYaGL~-~IRaY~~~kge~hRnvClIPvSAHGT 642 (1001)
T KOG2040|consen 568 IHPFAPVEQAQGYQQLFTELEKDLCEITGF----DSFSLQPNSGAQGEYAGLR-VIRAYLESKGEGHRNVCLIPVSAHGT 642 (1001)
T ss_pred CCCCCchHHHhhHHHHHHHHHHHhheeecc----cceeecCCCCcccchhhHH-HHHHHHHhccCCcceeEEEeecccCC
Confidence 445555 568888888888888775553 4555532 32 33443 34444332332 25677777877
Q ss_pred HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEE
Q 018147 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (360)
Q Consensus 228 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI 307 (360)
-...+.++|.++++|.++.++ .+|..+|++..+++.+ +..++.++.|+. -.++ ++.+++++++..+||--|-
T Consensus 643 NPASA~MagmkvvpV~~~~~G--~id~~dLk~kaekh~~---~Laa~MvTYPST--~Gvf-E~~i~d~cd~iHehGGQVY 714 (1001)
T KOG2040|consen 643 NPASAAMAGMKVVPVGCDANG--NIDMVDLKAKAEKHKD---NLAALMVTYPST--HGVF-EEGIDDICDIIHEHGGQVY 714 (1001)
T ss_pred ChhhHHhcCCEEEEeeccCCC--CccHHHHHHHHHHhhh---hhheeEEecccc--cccc-cccHHHHHHHHHhcCCEEE
Confidence 777889999999999998775 7899999988776532 577889998863 2333 3679999999999999999
Q ss_pred EccCCC
Q 018147 308 ADEVYQ 313 (360)
Q Consensus 308 ~DeaY~ 313 (360)
.|.+--
T Consensus 715 lDGANM 720 (1001)
T KOG2040|consen 715 LDGANM 720 (1001)
T ss_pred ecCCCc
Confidence 998754
No 388
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=95.31 E-value=0.23 Score=47.51 Aligned_cols=184 Identities=18% Similarity=0.155 Sum_probs=99.2
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCC--CcCcHHHHHHHHHHHHhhc--CCCCCCC----CEEEcCChHHHHHHHHHHHcc
Q 018147 141 SADSIERAWQILDQIPGRATGAYSH--SQGIKGLRDTIAAGIEARD--GFPADPN----DIFLTDGASPAVHMMMQLLIR 212 (360)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~--~~G~~~lr~~ia~~l~~~~--g~~~~~~----~I~~t~Ga~~al~~~~~~l~~ 212 (360)
...|++++-..+.+..+ -+|+- ..|=.++...+..++.+|- -+.++|+ +|---+| +.|...+..+++.
T Consensus 53 s~aVmeAlGS~ltNKYS---EGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SG-SPANfavYtall~ 128 (477)
T KOG2467|consen 53 SRAVMEALGSCLTNKYS---EGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSG-SPANFAVYTALLK 128 (477)
T ss_pred HHHHHHHHhHHhhcccc---cCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCC-CchhhHHHhhhcC
Confidence 55677777666655322 12222 1122334444443333321 1235555 3444455 4556677788884
Q ss_pred CCCCEEEEcC---CCchH--HHHHHHHcCCe-----EEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCC
Q 018147 213 SENDGILCPI---PQYPL--YSASIALHGGT-----LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282 (360)
Q Consensus 213 ~~gd~Vlv~~---P~y~~--~~~~~~~~g~~-----~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NP 282 (360)
|+|+|+--+ -.+-. |..--+...+. -.+|.+++..+ -+|.|.|++.-... ++|+||.-.
T Consensus 129 -Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG-~IDYD~Le~~A~~f-----rPk~iiaG~---- 197 (477)
T KOG2467|consen 129 -PHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTG-YIDYDKLEKTATLF-----RPKLIIAGT---- 197 (477)
T ss_pred -CCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCC-ceehHHHHHHHHhc-----CCcEEEecc----
Confidence 999998554 22221 11110111111 12344555543 58999999887765 898887432
Q ss_pred cccCCCHH-HHHHHHHHHHHcCCEEEEccCCC-CCccCCCCCCCCHHHHHHhhCCCCCCceEEEEeccCcCccc
Q 018147 283 TGQVLAEE-NQRAIVDFCKKEGLVLLADEVYQ-ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGRYF 354 (360)
Q Consensus 283 TG~~~~~~-~l~~i~~la~~~~i~lI~DeaY~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g 354 (360)
..+++. +..++-++|.+.|.++++|.++. +++-.+. -++-+.. .| |+..+.-|++-|
T Consensus 198 --SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~v--ipsPFey--------~D---iVTTTTHKsLRG 256 (477)
T KOG2467|consen 198 --SAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGV--IPSPFEY--------CD---IVTTTTHKSLRG 256 (477)
T ss_pred --ccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhccc--CCCcccc--------cc---eeeccccccccC
Confidence 233333 46777778888899999999984 4444332 2222222 23 666777777644
No 389
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=94.85 E-value=0.059 Score=50.04 Aligned_cols=188 Identities=20% Similarity=0.240 Sum_probs=106.3
Q ss_pred CCCccccCcc---CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 018147 127 HPSILDRSET---QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (360)
Q Consensus 127 ~p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al 203 (360)
...++|.-.| ..-.+|+++++....+.-... ..++... +|-+- |+.+.... + .-+-+++++++++|.
T Consensus 46 g~~yLDCInNVaHvghchp~VV~A~~kQmat~~t--N~RFlhd----~lv~c-A~~l~stl--P-eLsvc~F~NSGSEAN 115 (452)
T KOG1403|consen 46 GTRYLDCINNVAHVGHCHPEVVRAGAKQMATIST--NNRFLHD----ELVQC-ARTLTSTL--P-ELSVCFFVNSGSEAN 115 (452)
T ss_pred cccHHHHhhhhhhcccCCHHHHHHHHHHHhHhcc--cchhhHH----HHHHH-HHHHhhcC--C-CceEEEEecCCchhh
Confidence 4445554444 556789999987666654432 2233322 22222 22221110 1 134578899999999
Q ss_pred HHHHHHHcc--CCCCEEEEcCCCchHHHH-HHHH------cCC-----eEEEe-ecCC--CCCc-----------CCCHH
Q 018147 204 HMMMQLLIR--SENDGILCPIPQYPLYSA-SIAL------HGG-----TLVPY-YLDE--ATGW-----------GLETS 255 (360)
Q Consensus 204 ~~~~~~l~~--~~gd~Vlv~~P~y~~~~~-~~~~------~g~-----~~~~v-~~~~--~~~~-----------~~d~~ 255 (360)
.++++...+ ...| |++.+-.|.++.. .++. .|. .++.+ |+.+ .+.| ..-.+
T Consensus 116 DLALRLAR~ftkhqD-vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad 194 (452)
T KOG1403|consen 116 DLALRLARNFTKHQD-VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYAD 194 (452)
T ss_pred HHHHHHHHhhcccCc-eEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhh
Confidence 999887532 2444 4444555554332 2221 111 12222 1111 0011 12245
Q ss_pred HHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHH-HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCCCCH
Q 018147 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE-NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSF 326 (360)
Q Consensus 256 ~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~-~l~~i~~la~~~~i~lI~DeaY~~~~~~~~~~~~s~ 326 (360)
.+++.+++..++|..+.+.+-..-+.--|+++|+. -.+++++..+.+|-+.|.||+.-+|..-+. .++++
T Consensus 195 ~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~-hyWaf 265 (452)
T KOG1403|consen 195 PVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGS-HYWAF 265 (452)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccch-hhhhh
Confidence 67777777777776776555445566678888766 488999999999999999999999655553 34443
No 390
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=93.98 E-value=0.64 Score=42.59 Aligned_cols=134 Identities=13% Similarity=0.071 Sum_probs=75.9
Q ss_pred HHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHcc-CCCC-EEEEcCCCchHHHHHHHHcCCeEEEee-cCCCCCcCC
Q 018147 176 IAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SEND-GILCPIPQYPLYSASIALHGGTLVPYY-LDEATGWGL 252 (360)
Q Consensus 176 ia~~l~~~~g~~~~~~~I~~t~Ga~~al~~~~~~l~~-~~gd-~Vlv~~P~y~~~~~~~~~~g~~~~~v~-~~~~~~~~~ 252 (360)
++...-+..|...-.+.+++--..-..+.+.+..+.. .|.. .|+-+.-.--.....+-.+|.+++.+. +.+.+....
T Consensus 62 ~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~t 141 (432)
T KOG3843|consen 62 FAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELIT 141 (432)
T ss_pred HHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHH
Confidence 3333333346554455555432222334444444432 2433 343333332333334455788877664 334444556
Q ss_pred CHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 253 ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 253 d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
|++.++..+++. ....|+..+.....=..-+++.+++|+.+|..|++.-|+..+|+-
T Consensus 142 dleav~~~iee~-----g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnaygl 198 (432)
T KOG3843|consen 142 DLEAVEAIIEEL-----GEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGL 198 (432)
T ss_pred hHHHHHHHHHHh-----CCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhcccccc
Confidence 888888888774 444454444332222233567899999999999999999999986
No 391
>PRK12566 glycine dehydrogenase; Provisional
Probab=93.69 E-value=2.2 Score=46.32 Aligned_cols=122 Identities=16% Similarity=0.153 Sum_probs=72.0
Q ss_pred CCCCCC-----CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH---HHHHHHHHHccCCCCEEEEcCCCchHHHHH
Q 018147 160 TGAYSH-----SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP---AVHMMMQLLIRSENDGILCPIPQYPLYSAS 231 (360)
Q Consensus 160 ~~~Y~~-----~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~---al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~ 231 (360)
...|+| ++|..+..=.....+.+.-|.++ .|--+-.|++. |+.++.+.-. ....+|+++.-.+|.+..+
T Consensus 108 yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~v--aNASl~D~atA~aEA~~ma~~~~~-~k~~~~~v~~~~hP~~~~v 184 (954)
T PRK12566 108 YTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDL--ANASLLDEATAAAEAMALAKRVAK-SKSNRFFVDEHCHPQTLSV 184 (954)
T ss_pred hhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchh--hhhhhccchhHHHHHHHHHHHHhh-cCCCEEEECCCCCHHHHHH
Confidence 455666 34544333333333434345443 33344445554 4443333221 1256899999999988877
Q ss_pred HHH----cCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEE
Q 018147 232 IAL----HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (360)
Q Consensus 232 ~~~----~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI 307 (360)
++. .|.+++. +++++.+.+ ++-++++.+|+. .|.+- ++++|.++++++|.++|
T Consensus 185 ~~t~~~~~g~~i~~-------------~~~~~~~~~------~~~~v~vq~P~~-~G~i~---d~~~i~~~~h~~gal~~ 241 (954)
T PRK12566 185 LRTRAEGFGFELVV-------------DAVDNLAAH------AVFGALLQYPDT-HGEIR---DLRPLIDQLHGQQALAC 241 (954)
T ss_pred HHHhhhcCCcEEEE-------------cchhhcCCC------CEEEEEEECCCC-ceEEc---cHHHHHHHHHHcCCEEE
Confidence 665 3566653 223333322 577888889974 68884 49999999999988765
No 392
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=93.43 E-value=1.3 Score=39.69 Aligned_cols=99 Identities=21% Similarity=0.302 Sum_probs=70.7
Q ss_pred EEEcCChHHHHHHHHHHHccCCCCEE--------------EEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHH
Q 018147 193 IFLTDGASPAVHMMMQLLIRSENDGI--------------LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (360)
Q Consensus 193 I~~t~Ga~~al~~~~~~l~~~~gd~V--------------lv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~ 258 (360)
+.+-+|+.....++..++- .|-.| ....|.-......++..|..++....... ..-..++|.
T Consensus 4 ~aL~SGGKDS~~Al~~a~~--~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~--~e~eve~L~ 79 (223)
T COG2102 4 IALYSGGKDSFYALYLALE--EGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGE--EEREVEELK 79 (223)
T ss_pred EEEEecCcHHHHHHHHHHH--cCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCcc--chhhHHHHH
Confidence 6778899999888877773 44332 22222222334456667888888776542 244688999
Q ss_pred HHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEE
Q 018147 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (360)
Q Consensus 259 ~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI 307 (360)
++++.. +..+|+ +|.+.+..+...+-.+|++-|+.++
T Consensus 80 ~~l~~l-----~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 80 EALRRL-----KVDGIV-------AGAIASEYQKERVERLCEELGLKVY 116 (223)
T ss_pred HHHHhC-----cccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence 999874 556777 8999999999999999999998644
No 393
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=91.93 E-value=0.66 Score=44.25 Aligned_cols=66 Identities=21% Similarity=0.289 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHHHhcCCCccEEEEecC-CCCcc-cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCC
Q 018147 253 ETSEVKKQLEAAKAKGITVRALVVINP-GNPTG-QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (360)
Q Consensus 253 d~~~L~~~i~~~~~~g~~~k~iil~~P-~NPTG-~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~~ 319 (360)
-++++++.|.+.+++...+. -+|..| +..-| .--+++..+.+-++|++||+.+|+||+..+..-.+
T Consensus 254 Cl~~Ve~li~~~~~k~~pVa-aiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTG 321 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVA-AIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATG 321 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeE-EEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccC
Confidence 36777888887766654454 444556 33323 23478899999999999999999999998854444
No 394
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=89.63 E-value=3.8 Score=39.32 Aligned_cols=99 Identities=17% Similarity=0.205 Sum_probs=60.5
Q ss_pred CCccccCccCCCCCHHHHHHHHHHHHcCCCC--CCCCCCC-CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHH
Q 018147 128 PSILDRSETQGLFSADSIERAWQILDQIPGR--ATGAYSH-SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVH 204 (360)
Q Consensus 128 p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~--~~~~Y~~-~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~ 204 (360)
|...+|+.||...|+++++.+.+.+.+.... +...-++ +.-...+.+...+.+++.++++-+-+=+++-.|++..+.
T Consensus 4 ~~~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~ 83 (365)
T COG1932 4 PRVYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFA 83 (365)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHH
Confidence 5677899999999999999988877664220 1111122 122344555556666666776544333455667899999
Q ss_pred HHHHHHccCCCCEEEEcCCCchH
Q 018147 205 MMMQLLIRSENDGILCPIPQYPL 227 (360)
Q Consensus 205 ~~~~~l~~~~gd~Vlv~~P~y~~ 227 (360)
.+...|+. .+..-.+..-.|..
T Consensus 84 ~~p~nLl~-~~~~~yv~~g~Ws~ 105 (365)
T COG1932 84 MAPMNLLG-KRGTDYVDTGAWSE 105 (365)
T ss_pred HHHHhhhc-ccCceeEeeeehhH
Confidence 99999874 33221333444543
No 395
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=88.64 E-value=3.5 Score=38.79 Aligned_cols=169 Identities=16% Similarity=0.130 Sum_probs=107.7
Q ss_pred CccccCccC-CCCCHHHHHHHHHHHHcCCCCCCCCCCCCc-------CcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 018147 129 SILDRSETQ-GLFSADSIERAWQILDQIPGRATGAYSHSQ-------GIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (360)
Q Consensus 129 ~~l~~~~~~-~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~-------G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~ 200 (360)
..+.++-|. ..+|..+.+.+.+.++.-.. ...|+... +......-++... +...++|.+.+.-+
T Consensus 67 ~~iYlcGNSLGLmPK~t~~~~~~eLDkWak--~av~gH~~GkvPW~~~De~il~l~~~iV------GA~e~EvavmNsLT 138 (465)
T KOG3846|consen 67 PVIYLCGNSLGLMPKSTRNSINAELDKWAK--CAVEGHFKGKVPWVSIDEPILPLLAPIV------GAQENEVAVMNSLT 138 (465)
T ss_pred CeEEEeccccccCchhhHhHHHHHHHHHHh--hhhhcccccccceeecchhhhhhhhhhc------cCCchhhhhHhhhh
Confidence 455666663 34555555556666654321 22333332 2334444444444 46788999999999
Q ss_pred HHHHHHHHHHccCCC---CEEEEcCCCch----HHHHHHHHcCCeEE----EeecCCCCCcCCCHHHHHHHHHHHHhcCC
Q 018147 201 PAVHMMMQLLIRSEN---DGILCPIPQYP----LYSASIALHGGTLV----PYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (360)
Q Consensus 201 ~al~~~~~~l~~~~g---d~Vlv~~P~y~----~~~~~~~~~g~~~~----~v~~~~~~~~~~d~~~L~~~i~~~~~~g~ 269 (360)
..++.++..|.+ |- -+|+++.-.|| .....++..|..+. .+...+. .-.+..+++.+.|++. |.
T Consensus 139 vNlh~Ll~sFyK-PTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREG-EetlRteDILd~IEkn---gD 213 (465)
T KOG3846|consen 139 VNLHSLLISFYK-PTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREG-EETLRTEDILDTIEKN---GD 213 (465)
T ss_pred hHHHHHHHHhcC-CcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEeccccc-ccchhHHHHHHHHHhc---CC
Confidence 999999999985 43 34888776665 45566777887642 3322222 2257778888888763 33
Q ss_pred CccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCC
Q 018147 270 TVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ 313 (360)
Q Consensus 270 ~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~ 313 (360)
.+.+|+++-.+.=||+.++ +.+|-..-+..|++|=.|-++.
T Consensus 214 eiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHA 254 (465)
T KOG3846|consen 214 EIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHA 254 (465)
T ss_pred eEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhh
Confidence 4555666677889999999 7777755556688888887765
No 396
>PRK08265 short chain dehydrogenase; Provisional
Probab=88.17 E-value=11 Score=34.18 Aligned_cols=101 Identities=15% Similarity=0.030 Sum_probs=55.0
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCC
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~ 270 (360)
..+++|.|+..-=..+.+.|.. .|..|++.+-.-.......+..+.++..+.+|-. |.+.+++.++...++..+
T Consensus 7 k~vlItGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVA-AGARVAIVDIDADNGAAVAASLGERARFIATDIT-----DDAAIERAVATVVARFGR 80 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCC-----CHHHHHHHHHHHHHHhCC
Confidence 3455555544333445555664 7888888765433344444555666666666533 577777777665444335
Q ss_pred ccEEEEecC-CCCcccCCCHHHHHHHHH
Q 018147 271 VRALVVINP-GNPTGQVLAEENQRAIVD 297 (360)
Q Consensus 271 ~k~iil~~P-~NPTG~~~~~~~l~~i~~ 297 (360)
+..++.+-. ..+.+...+.++++++.+
T Consensus 81 id~lv~~ag~~~~~~~~~~~~~~~~~~~ 108 (261)
T PRK08265 81 VDILVNLACTYLDDGLASSRADWLAALD 108 (261)
T ss_pred CCEEEECCCCCCCCcCcCCHHHHHHHHh
Confidence 665554321 122333455666655443
No 397
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=88.02 E-value=16 Score=34.36 Aligned_cols=103 Identities=13% Similarity=0.148 Sum_probs=63.8
Q ss_pred CCCCEEEcCChHHHHHHHHHHHccCCC--CEEEEcC--CCchHHHHH--HHHcCCeEEEeecCCCCCcCCCHHHHHHHHH
Q 018147 189 DPNDIFLTDGASPAVHMMMQLLIRSEN--DGILCPI--PQYPLYSAS--IALHGGTLVPYYLDEATGWGLETSEVKKQLE 262 (360)
Q Consensus 189 ~~~~I~~t~Ga~~al~~~~~~l~~~~g--d~Vlv~~--P~y~~~~~~--~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 262 (360)
..++|++|.|.+..+...+....+ .| =+|++.+ |.+.++..+ +...|++..-++ | .++-..+.
T Consensus 161 hsnEviLT~g~SrTV~~FL~~A~k-k~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~---------d-aaVfA~Ms 229 (353)
T KOG1465|consen 161 HSNEVILTLGSSRTVENFLKHAAK-KGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP---------D-AAVFAMMS 229 (353)
T ss_pred ccCceEEecCccHHHHHHHHHHHh-ccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec---------c-HHHHHHhh
Confidence 467899999999988888877664 43 3455555 555543332 223466654443 2 33444444
Q ss_pred HHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEE
Q 018147 263 AAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (360)
Q Consensus 263 ~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~ 308 (360)
+ --|+|+-++.--+.|.+....-...++..|++|-+.+++
T Consensus 230 r------VnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~V 269 (353)
T KOG1465|consen 230 R------VNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIV 269 (353)
T ss_pred h------cceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEE
Confidence 3 244555556655666677666678888888888876655
No 398
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=85.74 E-value=13 Score=33.49 Aligned_cols=100 Identities=22% Similarity=0.227 Sum_probs=66.0
Q ss_pred EEEcCChHHHHHHHHHHHccCCCCEEEE-------------cCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHH
Q 018147 193 IFLTDGASPAVHMMMQLLIRSENDGILC-------------PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKK 259 (360)
Q Consensus 193 I~~t~Ga~~al~~~~~~l~~~~gd~Vlv-------------~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~ 259 (360)
++..+|+......+.++.. . -+-+.+ ..+........++..|..++.++.... +.-..++|.+
T Consensus 4 ~~l~SGGKDS~~al~~a~~-~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~--~e~~~e~l~~ 79 (223)
T TIGR00290 4 AALISGGKDSCLALYHALK-E-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGT--EEDEVEELKG 79 (223)
T ss_pred EEEecCcHHHHHHHHHHHH-h-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCC--ccHHHHHHHH
Confidence 5667888888888887764 2 332221 111222334566778988877664322 2234566777
Q ss_pred HHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEE
Q 018147 260 QLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (360)
Q Consensus 260 ~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~ 308 (360)
++++. .+.+++ +|.+.+..+...+-++|.+-|+..+.
T Consensus 80 ~l~~~-----gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~~ 116 (223)
T TIGR00290 80 ILHTL-----DVEAVV-------FGAIYSEYQKTRIERVCRELGLKSFA 116 (223)
T ss_pred HHHHc-----CCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEec
Confidence 77664 577777 89999999999999999999886443
No 399
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=84.51 E-value=24 Score=33.15 Aligned_cols=102 Identities=14% Similarity=0.085 Sum_probs=59.4
Q ss_pred CCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCch---HHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHH
Q 018147 188 ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP---LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (360)
Q Consensus 188 ~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 264 (360)
+..+-+++|.|+...=..+..-|.+ .|.++++.+-.=. .+...++..| ++..|.+|-. +.|++.+..+.-
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~-rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis-----~~eei~~~a~~V 108 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAK-RGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDIS-----DREEIYRLAKKV 108 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHH-hCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCC-----CHHHHHHHHHHH
Confidence 4445567777666655666666664 7887766663333 3334444445 6777777643 556666655544
Q ss_pred HhcCCCccEEEEecC---CCCcccCCCHHHHHHHHH
Q 018147 265 KAKGITVRALVVINP---GNPTGQVLAEENQRAIVD 297 (360)
Q Consensus 265 ~~~g~~~k~iil~~P---~NPTG~~~~~~~l~~i~~ 297 (360)
+++-.++ -|++||. +.-...-.+.+++++..+
T Consensus 109 k~e~G~V-~ILVNNAGI~~~~~ll~~~d~ei~k~~~ 143 (300)
T KOG1201|consen 109 KKEVGDV-DILVNNAGIVTGKKLLDCSDEEIQKTFD 143 (300)
T ss_pred HHhcCCc-eEEEeccccccCCCccCCCHHHHHHHHH
Confidence 4443344 4666776 233345567788888665
No 400
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=84.47 E-value=13 Score=30.75 Aligned_cols=99 Identities=12% Similarity=0.118 Sum_probs=57.1
Q ss_pred EEEcCChHHHHHHHHHHHccCCCC-EEEEcCCC--chHHHH---HHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHh
Q 018147 193 IFLTDGASPAVHMMMQLLIRSEND-GILCPIPQ--YPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (360)
Q Consensus 193 I~~t~Ga~~al~~~~~~l~~~~gd-~Vlv~~P~--y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 266 (360)
+++|.|++..=..+.+.|.. .|+ .|++.... ...... .++..+.++..+++|-. +.+.+++.++...+
T Consensus 3 ~lItGa~~giG~~~a~~l~~-~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 76 (167)
T PF00106_consen 3 VLITGASSGIGRALARALAR-RGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLS-----DPESIRALIEEVIK 76 (167)
T ss_dssp EEEETTTSHHHHHHHHHHHH-TTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETT-----SHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHh-cCceEEEEeeeccccccccccccccccccccccccccccc-----cccccccccccccc
Confidence 45555544433445556664 555 55555544 333333 34556788888887743 67888888887665
Q ss_pred cCCCccEEEEecCCCCcccC--CCHHHHHHHHH
Q 018147 267 KGITVRALVVINPGNPTGQV--LAEENQRAIVD 297 (360)
Q Consensus 267 ~g~~~k~iil~~P~NPTG~~--~~~~~l~~i~~ 297 (360)
+..+...++.+....+.+.. ++.++++++.+
T Consensus 77 ~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~ 109 (167)
T PF00106_consen 77 RFGPLDILINNAGIFSDGSLDDLSEEELERVFR 109 (167)
T ss_dssp HHSSESEEEEECSCTTSBSGGGSHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccchhhhhccc
Confidence 55567777766443333333 23456666555
No 401
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=83.99 E-value=26 Score=31.36 Aligned_cols=102 Identities=22% Similarity=0.300 Sum_probs=63.4
Q ss_pred EEEcCChHHHHHHHHHHHccCCCCEEE---EcCCC----c-------hHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHH
Q 018147 193 IFLTDGASPAVHMMMQLLIRSENDGIL---CPIPQ----Y-------PLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (360)
Q Consensus 193 I~~t~Ga~~al~~~~~~l~~~~gd~Vl---v~~P~----y-------~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~ 258 (360)
+++.+|+......+..+.- .|..|. +..+. | ......++..|.....+.++... ....+.|.
T Consensus 1 ~vl~SGGkDS~~al~~a~~--~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~~~~~~--~~~~~~l~ 76 (218)
T TIGR03679 1 AALYSGGKDSNYALYKALE--EGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIETSGEK--EKEVEDLK 76 (218)
T ss_pred CeeecCcHHHHHHHHHHHH--cCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEECCCCC--hHHHHHHH
Confidence 3566788887776665553 566552 22121 1 13345667789888877765211 12345677
Q ss_pred HHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEE
Q 018147 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (360)
Q Consensus 259 ~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI 307 (360)
+++...+++ ....|+ +|.+.+......+-++|.+.|+.++
T Consensus 77 ~~l~~~~~~--g~~~vv-------~G~i~sd~~~~~~e~v~~~~gl~~~ 116 (218)
T TIGR03679 77 GALKELKRE--GVEGIV-------TGAIASRYQKSRIERICEELGLKVF 116 (218)
T ss_pred HHHHHHHHc--CCCEEE-------ECCcccHhHHHHHHHHHHhCCCeEE
Confidence 777776554 466677 7888887777777788888776543
No 402
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=81.33 E-value=3.5 Score=38.96 Aligned_cols=70 Identities=17% Similarity=0.342 Sum_probs=50.7
Q ss_pred HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEE
Q 018147 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (360)
Q Consensus 228 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI 307 (360)
+.+.+..++.++..+.+.++.+|.+..+.+.+.-+. |.. .++ .+.|..++++|+++|++.|+++||-||
T Consensus 21 ~id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~----g~~------~~~-~~~~~~yT~~di~elv~yA~~rgI~vi 89 (303)
T cd02742 21 TIDVLARYKINTFHWHLTDDQAWRIESKKFPELAEK----GGQ------INP-RSPGGFYTYAQLKDIIEYAAARGIEVI 89 (303)
T ss_pred HHHHHHHhCCcEEEEeeecCCCceEeeCccchhhhh----ccc------ccC-CCCCCeECHHHHHHHHHHHHHcCCEEE
Confidence 455667789999999998888888877666554332 101 112 244668999999999999999998776
Q ss_pred E
Q 018147 308 A 308 (360)
Q Consensus 308 ~ 308 (360)
-
T Consensus 90 P 90 (303)
T cd02742 90 P 90 (303)
T ss_pred E
Confidence 4
No 403
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=81.14 E-value=23 Score=31.88 Aligned_cols=100 Identities=20% Similarity=0.267 Sum_probs=63.8
Q ss_pred EEEcCChHHHHHHHHHHHccCCCCE-------------EEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHH
Q 018147 193 IFLTDGASPAVHMMMQLLIRSENDG-------------ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKK 259 (360)
Q Consensus 193 I~~t~Ga~~al~~~~~~l~~~~gd~-------------Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~ 259 (360)
++..+|+......+.+++- . .+- .....+........++..|..++.+..... +.-..++|.+
T Consensus 4 ~vl~SGGKDS~lAl~~~~~-~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~--~e~~~~~l~~ 79 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALE-E-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGE--EEKEVEDLAG 79 (222)
T ss_pred EEEecCcHHHHHHHHHHHH-c-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCc--hhHHHHHHHH
Confidence 4567888887777776653 2 332 222222333445667778988877765432 1223445555
Q ss_pred HHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEE
Q 018147 260 QLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (360)
Q Consensus 260 ~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~ 308 (360)
.+++. .+.+|+ +|.+.+..+...+-++|.+-|+..+.
T Consensus 80 ~l~~~-----gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~~ 116 (222)
T TIGR00289 80 QLGEL-----DVEALC-------IGAIESNYQKSRIDKVCRELGLKSIA 116 (222)
T ss_pred HHHHc-----CCCEEE-------ECccccHHHHHHHHHHHHHcCCEEec
Confidence 45432 577777 89999999999999999999986543
No 404
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=80.71 E-value=15 Score=34.27 Aligned_cols=171 Identities=15% Similarity=0.072 Sum_probs=92.6
Q ss_pred CCccccCccCCCCCHHHHHHHHHHHHcCCCCC--CCCCCC-CcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHH
Q 018147 128 PSILDRSETQGLFSADSIERAWQILDQIPGRA--TGAYSH-SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVH 204 (360)
Q Consensus 128 p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~--~~~Y~~-~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~ 204 (360)
...++|..+|..+|..|+..+.+.+-+...-+ ...-++ +.....+.+.....+++.+.++-+-+-+++-.|++..+.
T Consensus 6 ~~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qFa 85 (370)
T KOG2790|consen 6 ERVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQFA 85 (370)
T ss_pred cceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCccccc
Confidence 34678888888899999998876665532211 111111 122344455555556665665533344566778888888
Q ss_pred HHHHHHcc-C---CCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCC-CcCCCHHHHHHHHHHHHhcCCCccEEEEecC
Q 018147 205 MMMQLLIR-S---ENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT-GWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (360)
Q Consensus 205 ~~~~~l~~-~---~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P 279 (360)
.+...|+. . .-|.|++-...--.+..+-+......+..++.+.. +--+|.+.++.. ++.+.+++|.-
T Consensus 86 Av~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~--------~da~yvyyCaN 157 (370)
T KOG2790|consen 86 AVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELN--------PDASYVYYCAN 157 (370)
T ss_pred ccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhcccC--------CCccEEEEecC
Confidence 87777762 1 34777777666556666544444445555554432 112455554431 24456666632
Q ss_pred CCCcccCCCHHHHHHHHHHHHHcCCEEEEccCC
Q 018147 280 GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVY 312 (360)
Q Consensus 280 ~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY 312 (360)
-.--|+-++ .+- +-.-+|.++|+|-.-
T Consensus 158 ETVHGVEf~-----~~P-~~~~~~~vlVaDmSS 184 (370)
T KOG2790|consen 158 ETVHGVEFD-----FIP-VNDPKGAVLVADMSS 184 (370)
T ss_pred ceeeceecC-----CCC-CCCCCCceEEEeccc
Confidence 222344433 111 112357777887553
No 405
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=80.30 E-value=24 Score=31.34 Aligned_cols=90 Identities=14% Similarity=0.191 Sum_probs=52.6
Q ss_pred hHHHHHHHHHHHccCCCCEEEE-cCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEe
Q 018147 199 ASPAVHMMMQLLIRSENDGILC-PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI 277 (360)
Q Consensus 199 a~~al~~~~~~l~~~~gd~Vlv-~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~ 277 (360)
+..+- .+++.|.. .+-.|.+ ..+.-......++..|++++..+++ |.+.|.++++. +..|+++
T Consensus 8 G~~G~-~v~~~L~~-~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-------~~~~l~~al~g-------~d~v~~~ 71 (233)
T PF05368_consen 8 GNQGR-SVVRALLS-AGFSVRALVRDPSSDRAQQLQALGAEVVEADYD-------DPESLVAALKG-------VDAVFSV 71 (233)
T ss_dssp SHHHH-HHHHHHHH-TTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT--------HHHHHHHHTT-------CSEEEEE
T ss_pred cHHHH-HHHHHHHh-CCCCcEEEEeccchhhhhhhhcccceEeecccC-------CHHHHHHHHcC-------CceEEee
Confidence 44443 34445543 5544443 3333223445567789998865543 68999998874 6677777
Q ss_pred cCCCCcccCCCHHHHHHHHHHHHHcCCEEE
Q 018147 278 NPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (360)
Q Consensus 278 ~P~NPTG~~~~~~~l~~i~~la~~~~i~lI 307 (360)
.+.+. .-..+....+++.|++.|+-.+
T Consensus 72 ~~~~~---~~~~~~~~~li~Aa~~agVk~~ 98 (233)
T PF05368_consen 72 TPPSH---PSELEQQKNLIDAAKAAGVKHF 98 (233)
T ss_dssp SSCSC---CCHHHHHHHHHHHHHHHT-SEE
T ss_pred cCcch---hhhhhhhhhHHHhhhccccceE
Confidence 65432 2234567889999999887443
No 406
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=79.17 E-value=3.4 Score=39.62 Aligned_cols=72 Identities=21% Similarity=0.365 Sum_probs=51.3
Q ss_pred HHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEE
Q 018147 227 LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL 306 (360)
Q Consensus 227 ~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~l 306 (360)
.+.+.+..++.++..+.+.++.+|.+..+.+.+.-.. | + . .....+.|..++++|+++|++.|+++||-|
T Consensus 22 ~~id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~----g----a-~-~~~~~~~~~~YT~~di~elv~yA~~rgI~v 91 (329)
T cd06568 22 RYIDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEI----G----G-S-TEVGGGPGGYYTQEDYKDIVAYAAERHITV 91 (329)
T ss_pred HHHHHHHHhCCcEEEEEeecCCcceeeecCccccccc----c----c-c-cccCCCCCCcCCHHHHHHHHHHHHHcCCEE
Confidence 3456677789999999998887888876665443211 1 0 0 112345678899999999999999999977
Q ss_pred EE
Q 018147 307 LA 308 (360)
Q Consensus 307 I~ 308 (360)
|-
T Consensus 92 IP 93 (329)
T cd06568 92 VP 93 (329)
T ss_pred EE
Confidence 64
No 407
>PRK05872 short chain dehydrogenase; Provisional
Probab=78.36 E-value=48 Score=30.73 Aligned_cols=101 Identities=12% Similarity=0.040 Sum_probs=53.6
Q ss_pred CCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcC--CeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 190 ~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g--~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
...+++|.|+...=..+.+.|. ..|.+|++..-.-.......+..+ .++..+.+|- -|.+.+++.+++..++
T Consensus 9 gk~vlItGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLH-ARGAKLALVDLEEAELAALAAELGGDDRVLTVVADV-----TDLAAMQAAAEEAVER 82 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 3456666554443344555566 488888887765444444444443 4555555553 3677787777665444
Q ss_pred CCCccEEEEecCCCCccc--CCCHHHHHHHH
Q 018147 268 GITVRALVVINPGNPTGQ--VLAEENQRAIV 296 (360)
Q Consensus 268 g~~~k~iil~~P~NPTG~--~~~~~~l~~i~ 296 (360)
..++..++.+--....+. ..+.+++++..
T Consensus 83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~ 113 (296)
T PRK05872 83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVI 113 (296)
T ss_pred cCCCCEEEECCCcCCCcCcccCCHHHHHHHH
Confidence 335665554322211121 23556665543
No 408
>PRK06500 short chain dehydrogenase; Provisional
Probab=78.31 E-value=48 Score=29.41 Aligned_cols=80 Identities=14% Similarity=0.047 Sum_probs=43.5
Q ss_pred CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCc
Q 018147 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (360)
Q Consensus 192 ~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~ 271 (360)
.+++|.++..-=..+.+.|.. .|..|++..-.-.......+..|.++..+.++.. |.+++.+.++...+...++
T Consensus 8 ~vlItGasg~iG~~la~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 8 TALITGGTSGIGLETARQFLA-EGARVAITGRDPASLEAARAELGESALVIRADAG-----DVAAQKALAQALAEAFGRL 81 (249)
T ss_pred EEEEeCCCchHHHHHHHHHHH-CCCEEEEecCCHHHHHHHHHHhCCceEEEEecCC-----CHHHHHHHHHHHHHHhCCC
Confidence 455555444333445556663 7888877665433344444555767666666533 5566655555433333356
Q ss_pred cEEEEe
Q 018147 272 RALVVI 277 (360)
Q Consensus 272 k~iil~ 277 (360)
..++.+
T Consensus 82 d~vi~~ 87 (249)
T PRK06500 82 DAVFIN 87 (249)
T ss_pred CEEEEC
Confidence 666544
No 409
>PRK07063 short chain dehydrogenase; Provisional
Probab=78.28 E-value=51 Score=29.61 Aligned_cols=101 Identities=16% Similarity=0.095 Sum_probs=52.0
Q ss_pred CCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHH-----cCCeEEEeecCCCCCcCCCHHHHHHHHHHH
Q 018147 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL-----HGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (360)
Q Consensus 190 ~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~-----~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 264 (360)
...+++|.|+...=..+.+.|.. .|.+|++..-.-.......+. .+.++..+.+|-. |.+.++++++..
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~-~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~ 80 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAR-EGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVT-----DAASVAAAVAAA 80 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCC-----CHHHHHHHHHHH
Confidence 34566665554433445556664 888888766443333333222 2455666666533 566777766654
Q ss_pred HhcCCCccEEEEecCCCCcc--cCCCHHHHHHHH
Q 018147 265 KAKGITVRALVVINPGNPTG--QVLAEENQRAIV 296 (360)
Q Consensus 265 ~~~g~~~k~iil~~P~NPTG--~~~~~~~l~~i~ 296 (360)
.++..++..++-+-.....+ ...+.+++++..
T Consensus 81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~ 114 (260)
T PRK07063 81 EEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCF 114 (260)
T ss_pred HHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHH
Confidence 44333566555442211111 234556666544
No 410
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=78.03 E-value=48 Score=29.23 Aligned_cols=80 Identities=18% Similarity=0.040 Sum_probs=44.3
Q ss_pred CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCc
Q 018147 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (360)
Q Consensus 192 ~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~ 271 (360)
.+++|.|+...=..+...|.. .|..|.+...............+.++..+++|-. |.+.+++.+++..++..++
T Consensus 8 ~vlItGa~g~iG~~la~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 8 KALVTGASGGIGEEIARLLHA-QGAIVGLHGTRVEKLEALAAELGERVKIFPANLS-----DRDEVKALGQKAEADLEGV 81 (245)
T ss_pred EEEEECCCChHHHHHHHHHHH-CCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCC-----CHHHHHHHHHHHHHHcCCC
Confidence 455555443333445566664 7878777655444444343444555555555532 5677777776654443456
Q ss_pred cEEEEe
Q 018147 272 RALVVI 277 (360)
Q Consensus 272 k~iil~ 277 (360)
.+++-+
T Consensus 82 d~vi~~ 87 (245)
T PRK12936 82 DILVNN 87 (245)
T ss_pred CEEEEC
Confidence 666655
No 411
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=77.53 E-value=64 Score=31.03 Aligned_cols=107 Identities=13% Similarity=0.020 Sum_probs=61.3
Q ss_pred CCCEEEcCChHHHHHHHHHHHccCCCCEE--EEcCCCch------HHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHH
Q 018147 190 PNDIFLTDGASPAVHMMMQLLIRSENDGI--LCPIPQYP------LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQL 261 (360)
Q Consensus 190 ~~~I~~t~Ga~~al~~~~~~l~~~~gd~V--lv~~P~y~------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i 261 (360)
.+-|+..+||.....++..+.. .-|..+ +..++.|. ....+++.+|.....+.. |.+.+.+..
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~-~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~--------d~~~~~~l~ 130 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKK-KLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI--------NPETFRKLQ 130 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHH-HhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC--------CHHHHHHHH
Confidence 4567778999887766533322 123333 34556654 345566668888877644 455555544
Q ss_pred HHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCcc
Q 018147 262 EAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317 (360)
Q Consensus 262 ~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~ 317 (360)
... .+ +..+|...+. ......+.++|+++|+.+|+.....+-.|
T Consensus 131 ~~~------~~-----~~~~pc~~c~-~~~~~~l~~~A~~~gi~~Il~G~~~dE~f 174 (343)
T TIGR03573 131 RAY------FK-----KVGDPEWPQD-HAIFASVYQVALKFNIPLIIWGENIAEEY 174 (343)
T ss_pred HHH------Hh-----ccCCCchhhh-hHHHHHHHHHHHHhCCCEEEeCCCHHHhc
Confidence 331 11 2233433222 23467788999999998887755544333
No 412
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=77.51 E-value=48 Score=29.79 Aligned_cols=80 Identities=13% Similarity=0.011 Sum_probs=44.5
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCc-hHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCC
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~ 269 (360)
..+++|.|+..-=..+.+.|. ..|-+|++....- ......++..+.++..+.+|- .|.+.+++.++...++..
T Consensus 9 k~~lItGas~gIG~aia~~l~-~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g 82 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLA-KAGADIVGVGVAEAPETQAQVEALGRKFHFITADL-----IQQKDIDSIVSQAVEVMG 82 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCC-----CCHHHHHHHHHHHHHHcC
Confidence 345555554444445555666 4888888764321 122233444566776666653 367777777776544433
Q ss_pred CccEEEE
Q 018147 270 TVRALVV 276 (360)
Q Consensus 270 ~~k~iil 276 (360)
++..++.
T Consensus 83 ~iD~lv~ 89 (251)
T PRK12481 83 HIDILIN 89 (251)
T ss_pred CCCEEEE
Confidence 5665553
No 413
>PRK08862 short chain dehydrogenase; Provisional
Probab=77.51 E-value=39 Score=30.10 Aligned_cols=82 Identities=10% Similarity=0.045 Sum_probs=46.3
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHH---HHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
..+++|.|+...=..+...|. ..|..|++..-.-...... ++..|.++..+.+|.. |.+.+++.++...++
T Consensus 6 k~~lVtGas~GIG~aia~~la-~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 79 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFA-RLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDF-----SQESIRHLFDAIEQQ 79 (227)
T ss_pred eEEEEECCccHHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 345555554433344555566 4899988876544433322 3334667777776643 677888777765444
Q ss_pred CC-CccEEEEecC
Q 018147 268 GI-TVRALVVINP 279 (360)
Q Consensus 268 g~-~~k~iil~~P 279 (360)
-. ++.+++ +|.
T Consensus 80 ~g~~iD~li-~na 91 (227)
T PRK08862 80 FNRAPDVLV-NNW 91 (227)
T ss_pred hCCCCCEEE-ECC
Confidence 22 565544 444
No 414
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=77.42 E-value=27 Score=31.84 Aligned_cols=101 Identities=19% Similarity=0.191 Sum_probs=65.7
Q ss_pred CCEEEcCChHHHHHHH-HHHHccCCCCEEEEcCCCchHHHHHHHHcC-CeEEEeecCCCCCcCCCHHHHHHHHHHHHhcC
Q 018147 191 NDIFLTDGASPAVHMM-MQLLIRSENDGILCPIPQYPLYSASIALHG-GTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~-~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g-~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g 268 (360)
..|++.+|++.+|-.+ .+.|. ..|-+|++..-.-......+...+ .++..+.+| -.|.+.+++++....++-
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~-~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~D-----VtD~~~~~~~i~~~~~~~ 79 (246)
T COG4221 6 GKVALITGASSGIGEATARALA-EAGAKVVLAARREERLEALADEIGAGAALALALD-----VTDRAAVEAAIEALPEEF 79 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHH-HCCCeEEEEeccHHHHHHHHHhhccCceEEEeec-----cCCHHHHHHHHHHHHHhh
Confidence 3578888888888554 45566 589999999888777888888888 456665555 336788777777655444
Q ss_pred CCccEEEEecCCCCcccC---CCHHHHHHHHHH
Q 018147 269 ITVRALVVINPGNPTGQV---LAEENQRAIVDF 298 (360)
Q Consensus 269 ~~~k~iil~~P~NPTG~~---~~~~~l~~i~~l 298 (360)
.++.+++ ||..=--|.- ...++|+.+++.
T Consensus 80 g~iDiLv-NNAGl~~g~~~~~~~~~dw~~Mid~ 111 (246)
T COG4221 80 GRIDILV-NNAGLALGDPLDEADLDDWDRMIDT 111 (246)
T ss_pred CcccEEE-ecCCCCcCChhhhCCHHHHHHHHHH
Confidence 4566554 5542222222 345677777763
No 415
>PRK06194 hypothetical protein; Provisional
Probab=77.01 E-value=59 Score=29.69 Aligned_cols=81 Identities=14% Similarity=0.023 Sum_probs=44.5
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHH---HHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI---ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
..+++|.|+...=..+.+.|.. .|..|++.+-.-....... ...|.++..+..|- -|.+.++++++...++
T Consensus 7 k~vlVtGasggIG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAA-LGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDV-----SDAAQVEALADAALER 80 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHH-CCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 3456665544333445555664 7888887764333322222 22366676666653 3677787777665444
Q ss_pred CCCccEEEEe
Q 018147 268 GITVRALVVI 277 (360)
Q Consensus 268 g~~~k~iil~ 277 (360)
..++.+|+.+
T Consensus 81 ~g~id~vi~~ 90 (287)
T PRK06194 81 FGAVHLLFNN 90 (287)
T ss_pred cCCCCEEEEC
Confidence 3356655544
No 416
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=76.98 E-value=4.2 Score=39.30 Aligned_cols=67 Identities=12% Similarity=0.279 Sum_probs=50.0
Q ss_pred HHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEE
Q 018147 227 LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL 306 (360)
Q Consensus 227 ~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~l 306 (360)
.+.+.+..+..++..+.+.++.+|.+..+.+.+.-+. . ....|..++++|+++|++.|+++||-|
T Consensus 22 ~~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~------g---------a~~~~~~YT~~di~eiv~yA~~rgI~v 86 (348)
T cd06562 22 RTIDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKK------G---------AYSPSEVYTPEDVKEIVEYARLRGIRV 86 (348)
T ss_pred HHHHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhc------c---------CcCCCceECHHHHHHHHHHHHHcCCEE
Confidence 3455667788999999988887888877666553221 1 012467899999999999999999877
Q ss_pred EE
Q 018147 307 LA 308 (360)
Q Consensus 307 I~ 308 (360)
|-
T Consensus 87 IP 88 (348)
T cd06562 87 IP 88 (348)
T ss_pred EE
Confidence 75
No 417
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=76.65 E-value=52 Score=28.85 Aligned_cols=103 Identities=22% Similarity=0.309 Sum_probs=66.5
Q ss_pred EEEcCChHHHHHHHHHHHccCCCCEEE---EcCCCc-----------hHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHH
Q 018147 193 IFLTDGASPAVHMMMQLLIRSENDGIL---CPIPQY-----------PLYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (360)
Q Consensus 193 I~~t~Ga~~al~~~~~~l~~~~gd~Vl---v~~P~y-----------~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~ 258 (360)
++..+|+.....++..+.- .|..|. +..|.. ......++..|.....++.+.+. .--.+.|.
T Consensus 3 ~v~~SGGkDS~~al~~a~~--~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl~~i~~~~~~--e~~~~~l~ 78 (194)
T cd01994 3 VALISGGKDSCYALYRALE--EGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIPLIRIEISGEE--EDEVEDLK 78 (194)
T ss_pred EEEecCCHHHHHHHHHHHH--cCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCcEEEEeCCCCc--hHHHHHHH
Confidence 4567888888877766653 454432 221211 12345667789888877764321 11236666
Q ss_pred HHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEE
Q 018147 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (360)
Q Consensus 259 ~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~ 308 (360)
+.+++.+++ ...+|+ +|.+.+..+...+-++|.+-|+..+.
T Consensus 79 ~~l~~~~~~--g~~~vv-------~G~i~sd~~~~~~e~~~~~~gl~~~~ 119 (194)
T cd01994 79 ELLRKLKEE--GVDAVV-------FGAILSEYQRTRVERVCERLGLEPLA 119 (194)
T ss_pred HHHHHHHHc--CCCEEE-------ECccccHHHHHHHHHHHHHcCCEEEe
Confidence 777665444 366677 89999999999999999999986544
No 418
>PRK05876 short chain dehydrogenase; Provisional
Probab=76.48 E-value=59 Score=29.79 Aligned_cols=82 Identities=16% Similarity=0.037 Sum_probs=46.0
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHH---HHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
..+++|.|+...=..+.+.|.. .|..|++.+-.-...... ++..|.++..+.+|-. |.+.+++.++...++
T Consensus 7 k~vlVTGas~gIG~ala~~La~-~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~ 80 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFAR-RGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR-----HREEVTHLADEAFRL 80 (275)
T ss_pred CEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCC-----CHHHHHHHHHHHHHH
Confidence 3466665554433455556664 788888766443333322 2334666766666533 677888877765444
Q ss_pred CCCccEEEEecC
Q 018147 268 GITVRALVVINP 279 (360)
Q Consensus 268 g~~~k~iil~~P 279 (360)
..++.+++ +|.
T Consensus 81 ~g~id~li-~nA 91 (275)
T PRK05876 81 LGHVDVVF-SNA 91 (275)
T ss_pred cCCCCEEE-ECC
Confidence 44566554 444
No 419
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=75.11 E-value=4.5 Score=38.43 Aligned_cols=64 Identities=16% Similarity=0.319 Sum_probs=46.2
Q ss_pred HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEE
Q 018147 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (360)
Q Consensus 228 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI 307 (360)
+.+.+..++.++..+.+.++.+|.+..+.+.+.-+. . ..|..++++|+++|++.|+++||-||
T Consensus 23 ~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~------g-----------~~~~~yT~~di~elv~yA~~rgI~vI 85 (311)
T cd06570 23 QLDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQK------A-----------SDGLYYTQEQIREVVAYARDRGIRVV 85 (311)
T ss_pred HHHHHHHhCCeEEEEEEecCCCceeecCCCcccccc------C-----------CCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 445666678889888888777787765554332111 0 13667999999999999999998776
Q ss_pred E
Q 018147 308 A 308 (360)
Q Consensus 308 ~ 308 (360)
-
T Consensus 86 P 86 (311)
T cd06570 86 P 86 (311)
T ss_pred E
Confidence 4
No 420
>PRK07024 short chain dehydrogenase; Provisional
Probab=74.88 E-value=64 Score=29.00 Aligned_cols=80 Identities=10% Similarity=0.009 Sum_probs=43.5
Q ss_pred CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcC--CeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCC
Q 018147 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (360)
Q Consensus 192 ~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g--~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~ 269 (360)
.+++|.|+...=..+...|. ..|..|++.+-.........+... .++..+.+|-. |.+.++++++...++..
T Consensus 4 ~vlItGas~gIG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~i~~~~~~~~~~~g 77 (257)
T PRK07024 4 KVFITGASSGIGQALAREYA-RQGATLGLVARRTDALQAFAARLPKAARVSVYAADVR-----DADALAAAAADFIAAHG 77 (257)
T ss_pred EEEEEcCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCC-----CHHHHHHHHHHHHHhCC
Confidence 46666554433344455565 478888887755433333333221 15556666533 57778777776544433
Q ss_pred CccEEEEe
Q 018147 270 TVRALVVI 277 (360)
Q Consensus 270 ~~k~iil~ 277 (360)
++..++.+
T Consensus 78 ~id~lv~~ 85 (257)
T PRK07024 78 LPDVVIAN 85 (257)
T ss_pred CCCEEEEC
Confidence 56555533
No 421
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=74.53 E-value=68 Score=29.16 Aligned_cols=82 Identities=13% Similarity=0.026 Sum_probs=45.1
Q ss_pred CCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHH---HHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHh
Q 018147 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (360)
Q Consensus 190 ~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 266 (360)
...+++|.|+...=..+...|.. .|..|++....-...... ++..|.++..+.+|-. |.+.+.+.++...+
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~ 83 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELAR-AGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVL-----DKESLEQARQQILE 83 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCC-----CHHHHHHHHHHHHH
Confidence 34456655544333555566664 788888776543332222 2334666666666533 56677766665444
Q ss_pred cCCCccEEEEe
Q 018147 267 KGITVRALVVI 277 (360)
Q Consensus 267 ~g~~~k~iil~ 277 (360)
+..++..++.+
T Consensus 84 ~~g~id~li~~ 94 (278)
T PRK08277 84 DFGPCDILING 94 (278)
T ss_pred HcCCCCEEEEC
Confidence 33356666544
No 422
>PRK06139 short chain dehydrogenase; Provisional
Probab=74.48 E-value=62 Score=30.82 Aligned_cols=100 Identities=15% Similarity=0.179 Sum_probs=53.1
Q ss_pred CCEEEcCChHHHHH-HHHHHHccCCCCEEEEcCCCchHHH---HHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHh
Q 018147 191 NDIFLTDGASPAVH-MMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (360)
Q Consensus 191 ~~I~~t~Ga~~al~-~~~~~l~~~~gd~Vlv~~P~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 266 (360)
..+++| |++.+|- .+.+.|. ..|.+|++..-.-.... ..++..|.++..+.+|-. |.+.++++++...+
T Consensus 8 k~vlIT-GAs~GIG~aia~~la-~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~~~~~~ 80 (330)
T PRK06139 8 AVVVIT-GASSGIGQATAEAFA-RRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVT-----DADQVKALATQAAS 80 (330)
T ss_pred CEEEEc-CCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC-----CHHHHHHHHHHHHH
Confidence 344555 4455554 4445565 47888887764433322 233445777766666533 67778777766544
Q ss_pred cCCCccEEEEecCC-CCccc--CCCHHHHHHHHHH
Q 018147 267 KGITVRALVVINPG-NPTGQ--VLAEENQRAIVDF 298 (360)
Q Consensus 267 ~g~~~k~iil~~P~-NPTG~--~~~~~~l~~i~~l 298 (360)
...++..+| +|.. ...|. -.+.++++++.++
T Consensus 81 ~~g~iD~lV-nnAG~~~~~~~~~~~~e~~~~~~~v 114 (330)
T PRK06139 81 FGGRIDVWV-NNVGVGAVGRFEETPIEAHEQVIQT 114 (330)
T ss_pred hcCCCCEEE-ECCCcCCCCCcccCCHHHHHHHHHh
Confidence 433566554 4442 22222 2344555555543
No 423
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=74.46 E-value=65 Score=28.91 Aligned_cols=82 Identities=13% Similarity=0.020 Sum_probs=45.5
Q ss_pred CCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCch--HHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP--LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 190 ~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~--~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
...+++|.|+..-=..+.+.|. ..|..|++..-.-. .....+...+.++..+.+|-. |.+.+++.+++..++
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~i~~~~~~~~~~ 88 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALA-KAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLT-----KPESAEKVVKEALEE 88 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 3445555554443345555666 47888877654421 122233344666666666533 577777777665544
Q ss_pred CCCccEEEEe
Q 018147 268 GITVRALVVI 277 (360)
Q Consensus 268 g~~~k~iil~ 277 (360)
..++..++.+
T Consensus 89 ~g~id~li~~ 98 (258)
T PRK06935 89 FGKIDILVNN 98 (258)
T ss_pred cCCCCEEEEC
Confidence 4456766654
No 424
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=74.37 E-value=65 Score=28.86 Aligned_cols=80 Identities=14% Similarity=0.035 Sum_probs=47.2
Q ss_pred CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCc
Q 018147 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (360)
Q Consensus 192 ~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~ 271 (360)
.+++|.|+...=..+.+.|.. .|.+|++.+..-.......+..+.++..+.+|- .|.+.++++++...++..++
T Consensus 8 ~vlItGas~~iG~~ia~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 8 VALLTGAASGIGEAVAERYLA-EGARVVIADIKPARARLAALEIGPAAIAVSLDV-----TRQDSIDRIVAAAVERFGGI 81 (257)
T ss_pred EEEEeCCCchHHHHHHHHHHH-cCCEEEEEcCCHHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 455555444333445555664 788888887665555454444455566666553 36777777777654444456
Q ss_pred cEEEEe
Q 018147 272 RALVVI 277 (360)
Q Consensus 272 k~iil~ 277 (360)
.+++.+
T Consensus 82 d~li~~ 87 (257)
T PRK07067 82 DILFNN 87 (257)
T ss_pred CEEEEC
Confidence 666654
No 425
>PRK06114 short chain dehydrogenase; Provisional
Probab=73.67 E-value=68 Score=28.76 Aligned_cols=81 Identities=11% Similarity=0.027 Sum_probs=44.3
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCc-hHHH---HHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHh
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-PLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y-~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 266 (360)
..+++|.|+..-=..+.+.|.. .|..|++....- .... ..++..+.++..+.+|-. |.+.+++.++...+
T Consensus 9 k~~lVtG~s~gIG~~ia~~l~~-~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~i~~~~~~~~~ 82 (254)
T PRK06114 9 QVAFVTGAGSGIGQRIAIGLAQ-AGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVT-----SKADLRAAVARTEA 82 (254)
T ss_pred CEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 4455555444433445555664 788888765322 1222 233344666666666532 67777777776544
Q ss_pred cCCCccEEEEe
Q 018147 267 KGITVRALVVI 277 (360)
Q Consensus 267 ~g~~~k~iil~ 277 (360)
+..++..++.+
T Consensus 83 ~~g~id~li~~ 93 (254)
T PRK06114 83 ELGALTLAVNA 93 (254)
T ss_pred HcCCCCEEEEC
Confidence 43456655543
No 426
>PRK08589 short chain dehydrogenase; Validated
Probab=73.24 E-value=73 Score=28.97 Aligned_cols=96 Identities=19% Similarity=0.169 Sum_probs=50.3
Q ss_pred CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHH---HcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcC
Q 018147 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (360)
Q Consensus 192 ~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g 268 (360)
.+++|.|+...=..+.+.|.. .|..|++.... ......++ ..+.++..+.+|-. |.+.++++++...++.
T Consensus 8 ~vlItGas~gIG~aia~~l~~-~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 8 VAVITGASTGIGQASAIALAQ-EGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDIS-----DEQQVKDFASEIKEQF 80 (272)
T ss_pred EEEEECCCchHHHHHHHHHHH-CCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecC-----CHHHHHHHHHHHHHHc
Confidence 455555444333445556664 88898887765 44333332 33556666666533 5667777666554443
Q ss_pred CCccEEEEecCC-C-Cccc--CCCHHHHHHH
Q 018147 269 ITVRALVVINPG-N-PTGQ--VLAEENQRAI 295 (360)
Q Consensus 269 ~~~k~iil~~P~-N-PTG~--~~~~~~l~~i 295 (360)
.++..++ +|.. . +.+. ..+.++++++
T Consensus 81 g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~ 110 (272)
T PRK08589 81 GRVDVLF-NNAGVDNAAGRIHEYPVDVFDKI 110 (272)
T ss_pred CCcCEEE-ECCCCCCCCCCcccCCHHHHHHH
Confidence 3565554 4432 1 2222 3355666543
No 427
>PRK06483 dihydromonapterin reductase; Provisional
Probab=73.20 E-value=66 Score=28.39 Aligned_cols=98 Identities=8% Similarity=0.044 Sum_probs=48.7
Q ss_pred CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCc
Q 018147 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (360)
Q Consensus 192 ~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~ 271 (360)
.+++|.|+..-=..+.+.|. ..|..|++....-......++..|...+ .+|- .|.+.+++.++...++..++
T Consensus 4 ~vlItGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~D~-----~~~~~~~~~~~~~~~~~~~i 75 (236)
T PRK06483 4 PILITGAGQRIGLALAWHLL-AQGQPVIVSYRTHYPAIDGLRQAGAQCI--QADF-----STNAGIMAFIDELKQHTDGL 75 (236)
T ss_pred eEEEECCCChHHHHHHHHHH-HCCCeEEEEeCCchhHHHHHHHcCCEEE--EcCC-----CCHHHHHHHHHHHHhhCCCc
Confidence 35555554433344555566 3788887766443333334444564443 3432 25677777766654433345
Q ss_pred cEEEEecCCCCcc--cCCCHHHHHHHHH
Q 018147 272 RALVVINPGNPTG--QVLAEENQRAIVD 297 (360)
Q Consensus 272 k~iil~~P~NPTG--~~~~~~~l~~i~~ 297 (360)
..++.+-.....+ ...+.+++++..+
T Consensus 76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~ 103 (236)
T PRK06483 76 RAIIHNASDWLAEKPGAPLADVLARMMQ 103 (236)
T ss_pred cEEEECCccccCCCcCccCHHHHHHHHH
Confidence 5554332111111 1234666766553
No 428
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=73.11 E-value=59 Score=28.75 Aligned_cols=102 Identities=12% Similarity=0.181 Sum_probs=59.4
Q ss_pred CCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 188 ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 188 ~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
++...|++..|+..|...+-. |+ ..|-.|.+.+|....-...+...| ++..+.- .| ..+.+ .
T Consensus 7 l~gk~vlVvGgG~va~rk~~~-Ll-~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~----~~--~~~dl----~----- 68 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKARL-LL-KAGAQLRVIAEELESELTLLAEQG-GITWLAR----CF--DADIL----E----- 68 (205)
T ss_pred cCCCeEEEECcCHHHHHHHHH-HH-HCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeC----CC--CHHHh----C-----
Confidence 344578888888888877654 44 377788888887764443333344 3333321 12 22322 1
Q ss_pred CCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEE-EEcc-CCCCCcc
Q 018147 268 GITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL-LADE-VYQENVY 317 (360)
Q Consensus 268 g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~l-I~De-aY~~~~~ 317 (360)
.. .+++..++++ +-=.+|.+.|++.++++ ++|+ -..+|++
T Consensus 69 --~~-~lVi~at~d~-------~ln~~i~~~a~~~~ilvn~~d~~e~~~f~~ 110 (205)
T TIGR01470 69 --GA-FLVIAATDDE-------ELNRRVAHAARARGVPVNVVDDPELCSFIF 110 (205)
T ss_pred --Cc-EEEEECCCCH-------HHHHHHHHHHHHcCCEEEECCCcccCeEEE
Confidence 23 4455556554 22467899999999887 3444 3455443
No 429
>PRK05717 oxidoreductase; Validated
Probab=73.03 E-value=62 Score=28.99 Aligned_cols=80 Identities=16% Similarity=-0.005 Sum_probs=44.2
Q ss_pred CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCc
Q 018147 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (360)
Q Consensus 192 ~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~ 271 (360)
.+++|.|+...=..+.+.|.. .|.+|++.+..........+..+.++..+.+|-. |.+.+++++++..++..++
T Consensus 12 ~vlItG~sg~IG~~~a~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 12 VALVTGAARGIGLGIAAWLIA-EGWQVVLADLDRERGSKVAKALGENAWFIAMDVA-----DEAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred EEEEeCCcchHHHHHHHHHHH-cCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCC-----CHHHHHHHHHHHHHHhCCC
Confidence 455555543333445556664 7888888765443334444444555666665532 5677777666554433356
Q ss_pred cEEEEe
Q 018147 272 RALVVI 277 (360)
Q Consensus 272 k~iil~ 277 (360)
..++.+
T Consensus 86 d~li~~ 91 (255)
T PRK05717 86 DALVCN 91 (255)
T ss_pred CEEEEC
Confidence 666544
No 430
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=72.88 E-value=16 Score=32.81 Aligned_cols=100 Identities=18% Similarity=0.210 Sum_probs=56.8
Q ss_pred EEEcCChHHHHHHHHHHHccCCCCEEE----Ec---------CCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHH
Q 018147 193 IFLTDGASPAVHMMMQLLIRSENDGIL----CP---------IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKK 259 (360)
Q Consensus 193 I~~t~Ga~~al~~~~~~l~~~~gd~Vl----v~---------~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~ 259 (360)
+++-+|+..+...+.+++. . .+-+. ++ .+........++..|..++.++...+. .-..++|.+
T Consensus 4 v~l~SGGKDS~lAl~~a~~-~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~~--~~~~~~l~~ 79 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALR-Q-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGDE--EDYVEDLKE 79 (218)
T ss_dssp EEE--SSHHHHHHHHHHHH-T--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE---C--CCHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHH-h-CCccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCcc--chhhHHHHH
Confidence 5667888888888777764 2 22211 11 111223456778889999888876321 223567777
Q ss_pred HHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEE
Q 018147 260 QLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (360)
Q Consensus 260 ~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~ 308 (360)
++++. ++.+++ +|.+.+......+-++|.+.|+-.+.
T Consensus 80 ~l~~~-----~v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~~~ 116 (218)
T PF01902_consen 80 ALKEL-----KVEAVV-------FGDIDSEYQRNWVERVCERLGLEAVF 116 (218)
T ss_dssp HHCTC-------SEEE---------TTS-HHHHHHHHHHHHHCT-EEE-
T ss_pred HHHHc-----CCCEEE-------ECcCCcHHHHHHHHHHHHHcCCEEEe
Confidence 77543 567777 89999999999999999999986554
No 431
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=72.76 E-value=71 Score=28.63 Aligned_cols=160 Identities=19% Similarity=0.222 Sum_probs=88.7
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHH----HHHHHHccC--
Q 018147 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVH----MMMQLLIRS-- 213 (360)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga~~al~----~~~~~l~~~-- 213 (360)
.-++.++.+++.....+. ...-+-..|-+.--+.++ .+.+... +-.-++++-+.|.+.++- .+..+|...
T Consensus 39 tve~av~~mk~y~~~~~~--avSVGLGaGdp~Q~~~Va-~Ia~~~~-P~HVNQvFtgag~sr~~Lg~~~T~vN~LvsPTG 114 (236)
T TIGR03581 39 TVEEAIEDMKKYQKEIDN--AVSVGLGAGDPNQSAMVA-DISAHTQ-PQHINQVFTGVGTSRALLGQADTVINGLVSPTG 114 (236)
T ss_pred CHHHHHHHHHHHHHhCCC--ceEEecCCCCHHHHHHHH-HHHHHcC-CccccccccchHHHHHHhCCccceEEEeecCCC
Confidence 355677777776666543 122333345554333333 3333322 234456777778776553 333344431
Q ss_pred -CCCEEEEcC-CCc-------h---HHHHHHHHcCCe-EEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCC
Q 018147 214 -ENDGILCPI-PQY-------P---LYSASIALHGGT-LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (360)
Q Consensus 214 -~gd~Vlv~~-P~y-------~---~~~~~~~~~g~~-~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~ 280 (360)
+| .|-+.+ |.- - .-..+++..|+. +.++|+.... ..|+++..-+...+.| +.+
T Consensus 115 ~~G-~VkISTGp~Ss~~~~~iV~vetAiaml~dmG~~SiKffPM~Gl~----~leE~~avA~aca~~g-----~~l---- 180 (236)
T TIGR03581 115 TPG-LVNISTGPLSSQGKEAIVPIETAIAMLKDMGGSSVKFFPMGGLK----HLEEYAAVAKACAKHG-----FYL---- 180 (236)
T ss_pred ccc-eEEeccCcccccCCCceeeHHHHHHHHHHcCCCeeeEeecCCcc----cHHHHHHHHHHHHHcC-----Ccc----
Confidence 22 233332 211 1 123345555655 5566775321 3566555443322221 222
Q ss_pred CCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccC
Q 018147 281 NPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYV 318 (360)
Q Consensus 281 NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~~~~ 318 (360)
-|||.+ +.+.+++|+++|.+.|+--|.=-+|+.++-.
T Consensus 181 EPTGGI-dl~Nf~~I~~i~ldaGv~kviPHIYssiIDk 217 (236)
T TIGR03581 181 EPTGGI-DLDNFEEIVQIALDAGVEKVIPHVYSSIIDK 217 (236)
T ss_pred CCCCCc-cHHhHHHHHHHHHHcCCCeeccccceecccc
Confidence 689987 8899999999999999999999999987653
No 432
>PRK05867 short chain dehydrogenase; Provisional
Probab=72.64 E-value=71 Score=28.55 Aligned_cols=81 Identities=14% Similarity=0.144 Sum_probs=44.4
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHH---HHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
..+++|.|+..-=..+.+.|. ..|.+|++..-.-...... ++..+.++..+.+|- .|.+.++++++...+.
T Consensus 10 k~vlVtGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 10 KRALITGASTGIGKRVALAYV-EAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDV-----SQHQQVTSMLDQVTAE 83 (253)
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 345555554433344555566 4788888766443333332 233455666666653 3677777777654443
Q ss_pred CCCccEEEEe
Q 018147 268 GITVRALVVI 277 (360)
Q Consensus 268 g~~~k~iil~ 277 (360)
..++..++.+
T Consensus 84 ~g~id~lv~~ 93 (253)
T PRK05867 84 LGGIDIAVCN 93 (253)
T ss_pred hCCCCEEEEC
Confidence 3356666544
No 433
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=71.96 E-value=71 Score=28.26 Aligned_cols=82 Identities=16% Similarity=0.070 Sum_probs=45.0
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHc--CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcC
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~--g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g 268 (360)
..+++|.|+...=..+.+.|.. .|.+|++..-.-.......... +.++..+.+|- .|.+.+.+++++..++.
T Consensus 6 ~~vlItGasg~iG~~l~~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 6 KVAIVTGASSGIGEGIARRFAA-EGARVVVTDRNEEAAERVAAEILAGGRAIAVAADV-----SDEADVEAAVAAALERF 79 (251)
T ss_pred cEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHHHHHh
Confidence 4566665443333445555664 7878877664433333322222 34555665553 36788887776654444
Q ss_pred CCccEEEEec
Q 018147 269 ITVRALVVIN 278 (360)
Q Consensus 269 ~~~k~iil~~ 278 (360)
.++.+|+.+.
T Consensus 80 ~~~d~vi~~a 89 (251)
T PRK07231 80 GSVDILVNNA 89 (251)
T ss_pred CCCCEEEECC
Confidence 4667666554
No 434
>PRK06841 short chain dehydrogenase; Provisional
Probab=71.63 E-value=74 Score=28.34 Aligned_cols=82 Identities=17% Similarity=0.114 Sum_probs=42.9
Q ss_pred CCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCC
Q 018147 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (360)
Q Consensus 190 ~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~ 269 (360)
...+++|.|+...=..+...|. ..|.+|++...............+.++..+++|- .+.+.+++.++...++..
T Consensus 15 ~k~vlItGas~~IG~~la~~l~-~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFA-AKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDV-----SDSQSVEAAVAAVISAFG 88 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecC-----CCHHHHHHHHHHHHHHhC
Confidence 3446666543333334455555 4788888776543322222222344444555553 267777777765544433
Q ss_pred CccEEEEe
Q 018147 270 TVRALVVI 277 (360)
Q Consensus 270 ~~k~iil~ 277 (360)
++.+++.+
T Consensus 89 ~~d~vi~~ 96 (255)
T PRK06841 89 RIDILVNS 96 (255)
T ss_pred CCCEEEEC
Confidence 56666654
No 435
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=71.48 E-value=66 Score=27.71 Aligned_cols=46 Identities=26% Similarity=0.528 Sum_probs=27.9
Q ss_pred CCCHHHHHHHHHHHHhcCCCccEEEEe-cCCCCcccCCCHHHHHHHHHHHHHcC
Q 018147 251 GLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEG 303 (360)
Q Consensus 251 ~~d~~~L~~~i~~~~~~g~~~k~iil~-~P~NPTG~~~~~~~l~~i~~la~~~~ 303 (360)
.+|.++++++++..+.+|.+.-+|.+. .+-||- .=+++.+++++.|
T Consensus 130 ~ld~~~v~~~~~~l~~~gv~avAV~~~fS~~np~-------hE~~v~eii~e~g 176 (176)
T PF05378_consen 130 PLDEDEVREALRELKDKGVEAVAVSLLFSYRNPE-------HEQRVAEIIREEG 176 (176)
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEEECccCCCCHH-------HHHHHHHHHHhcC
Confidence 468899999998887765433333333 445653 2345566666653
No 436
>PRK07478 short chain dehydrogenase; Provisional
Probab=71.28 E-value=76 Score=28.33 Aligned_cols=79 Identities=15% Similarity=0.099 Sum_probs=44.7
Q ss_pred CEEEcCChHHHH-HHHHHHHccCCCCEEEEcCCCchHHHHH---HHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 192 DIFLTDGASPAV-HMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 192 ~I~~t~Ga~~al-~~~~~~l~~~~gd~Vlv~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
.+++|.| +.+| ..+.+.|.. .|.+|++..-.-...... ++..+.++..+++|-. |.+.+++++++..++
T Consensus 8 ~~lItGa-s~giG~~ia~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 80 (254)
T PRK07478 8 VAIITGA-SSGIGRAAAKLFAR-EGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVR-----DEAYAKALVALAVER 80 (254)
T ss_pred EEEEeCC-CChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHh
Confidence 4555544 4444 344556664 788888776433332222 3334666777766633 677787777765444
Q ss_pred CCCccEEEEe
Q 018147 268 GITVRALVVI 277 (360)
Q Consensus 268 g~~~k~iil~ 277 (360)
..++..++.+
T Consensus 81 ~~~id~li~~ 90 (254)
T PRK07478 81 FGGLDIAFNN 90 (254)
T ss_pred cCCCCEEEEC
Confidence 3456666544
No 437
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=71.02 E-value=14 Score=34.79 Aligned_cols=75 Identities=8% Similarity=0.176 Sum_probs=45.0
Q ss_pred CCCchHHHHHHHH--cCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHH
Q 018147 222 IPQYPLYSASIAL--HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (360)
Q Consensus 222 ~P~y~~~~~~~~~--~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la 299 (360)
-|+|+...++-+. -..-++.+|.. .-++.++++.+. .+|.++|..-+. +.++.++|.++|
T Consensus 51 ~~~y~sv~dlp~~~~~DlAvi~vp~~------~v~~~l~e~~~~------gvk~avI~s~Gf------~~~~~~~l~~~a 112 (291)
T PRK05678 51 LPVFNTVAEAVEATGANASVIYVPPP------FAADAILEAIDA------GIDLIVCITEGI------PVLDMLEVKAYL 112 (291)
T ss_pred eeccCCHHHHhhccCCCEEEEEcCHH------HHHHHHHHHHHC------CCCEEEEECCCC------CHHHHHHHHHHH
Confidence 3455555555543 23334444422 135556665554 688777765442 345556899999
Q ss_pred HHcCCEEEEccCCCC
Q 018147 300 KKEGLVLLADEVYQE 314 (360)
Q Consensus 300 ~~~~i~lI~DeaY~~ 314 (360)
+++|+.+|==.+.+-
T Consensus 113 ~~~girvlGPNc~Gi 127 (291)
T PRK05678 113 ERKKTRLIGPNCPGI 127 (291)
T ss_pred HHcCCEEECCCCCcc
Confidence 999998886666544
No 438
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=70.97 E-value=60 Score=29.21 Aligned_cols=81 Identities=9% Similarity=0.052 Sum_probs=42.8
Q ss_pred CCEEEcCChH-HHH-HHHHHHHccCCCCEEEEcCCCchHHHHHHHH-cCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 191 NDIFLTDGAS-PAV-HMMMQLLIRSENDGILCPIPQYPLYSASIAL-HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 191 ~~I~~t~Ga~-~al-~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
..+++|.|++ .+| ..+.+.|.+ .|.+|++..-. ......++. .+.++..+.+|- -|.+.++++++...++
T Consensus 8 k~~lItGas~~~gIG~a~a~~la~-~G~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 80 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIKD-QGATVIYTYQN-DRMKKSLQKLVDEEDLLVECDV-----ASDESIERAFATIKER 80 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHHH-CCCEEEEecCc-hHHHHHHHhhccCceeEEeCCC-----CCHHHHHHHHHHHHHH
Confidence 4466666552 334 444555664 89898876543 222222222 233455555553 3677777777665444
Q ss_pred CCCccEEEEecC
Q 018147 268 GITVRALVVINP 279 (360)
Q Consensus 268 g~~~k~iil~~P 279 (360)
..++.+++ +|.
T Consensus 81 ~g~iD~lv-~nA 91 (252)
T PRK06079 81 VGKIDGIV-HAI 91 (252)
T ss_pred hCCCCEEE-Ecc
Confidence 33566554 444
No 439
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=70.85 E-value=52 Score=29.63 Aligned_cols=82 Identities=12% Similarity=0.058 Sum_probs=44.3
Q ss_pred CCCEEEcCChH-HHH-HHHHHHHccCCCCEEEEcCC-------Cc----h---HHHHHHHHcCCeEEEeecCCCCCcCCC
Q 018147 190 PNDIFLTDGAS-PAV-HMMMQLLIRSENDGILCPIP-------QY----P---LYSASIALHGGTLVPYYLDEATGWGLE 253 (360)
Q Consensus 190 ~~~I~~t~Ga~-~al-~~~~~~l~~~~gd~Vlv~~P-------~y----~---~~~~~~~~~g~~~~~v~~~~~~~~~~d 253 (360)
...+++|.|+. .+| ..+.+.|. ..|..|++... .+ . .....++..|.++..+++|-. |
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~-~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~-----~ 79 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELA-EAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLT-----Q 79 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHH-HCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCC-----C
Confidence 34566666542 233 33344455 37888877521 11 1 112223445777777776633 6
Q ss_pred HHHHHHHHHHHHhcCCCccEEEEe
Q 018147 254 TSEVKKQLEAAKAKGITVRALVVI 277 (360)
Q Consensus 254 ~~~L~~~i~~~~~~g~~~k~iil~ 277 (360)
.++++++++...++..++..++.+
T Consensus 80 ~~~i~~~~~~~~~~~g~id~li~~ 103 (256)
T PRK12859 80 NDAPKELLNKVTEQLGYPHILVNN 103 (256)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEC
Confidence 778888887665443355555543
No 440
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=70.48 E-value=46 Score=25.44 Aligned_cols=71 Identities=15% Similarity=0.232 Sum_probs=46.3
Q ss_pred CCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHc
Q 018147 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (360)
Q Consensus 223 P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~ 302 (360)
.....|...++.+|++.+.. ..++++.-....|+..+.+ +.+|++. |+. .+-+-...+-+.|+++
T Consensus 10 ~~~~~~~~~~~~~G~~~~~h--g~~~~~~~~~~~l~~~i~~-------aD~VIv~-----t~~-vsH~~~~~vk~~akk~ 74 (97)
T PF10087_consen 10 DRERRYKRILEKYGGKLIHH--GRDGGDEKKASRLPSKIKK-------ADLVIVF-----TDY-VSHNAMWKVKKAAKKY 74 (97)
T ss_pred ccHHHHHHHHHHcCCEEEEE--ecCCCCccchhHHHHhcCC-------CCEEEEE-----eCC-cChHHHHHHHHHHHHc
Confidence 34567889999999999888 3333333333447776653 5666554 222 2334578889999999
Q ss_pred CCEEEE
Q 018147 303 GLVLLA 308 (360)
Q Consensus 303 ~i~lI~ 308 (360)
|+.++.
T Consensus 75 ~ip~~~ 80 (97)
T PF10087_consen 75 GIPIIY 80 (97)
T ss_pred CCcEEE
Confidence 987664
No 441
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=70.27 E-value=79 Score=28.10 Aligned_cols=96 Identities=19% Similarity=0.177 Sum_probs=50.9
Q ss_pred EEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHH---HHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCC
Q 018147 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY---SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (360)
Q Consensus 193 I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~ 269 (360)
+++|.|+...-..+.+.|.. .|-.|++..-.-... ...+...+.++..+.+|-. |.+.+.+++....++..
T Consensus 3 ~lItG~sg~iG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-----~~~~i~~~~~~~~~~~~ 76 (254)
T TIGR02415 3 ALVTGGAQGIGKGIAERLAK-DGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVS-----DKDQVFSAIDQAAEKFG 76 (254)
T ss_pred EEEeCCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHHHHcC
Confidence 45555443333444555664 787777665332222 1223344666666666533 67788887776555444
Q ss_pred CccEEEEecCCCCccc--CCCHHHHHH
Q 018147 270 TVRALVVINPGNPTGQ--VLAEENQRA 294 (360)
Q Consensus 270 ~~k~iil~~P~NPTG~--~~~~~~l~~ 294 (360)
++..++.+....+.+. -.+.+++++
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~ 103 (254)
T TIGR02415 77 GFDVMVNNAGVAPITPILEITEEELKK 103 (254)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHH
Confidence 6777776644444333 234455444
No 442
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=70.02 E-value=9.6 Score=38.13 Aligned_cols=82 Identities=15% Similarity=0.236 Sum_probs=52.3
Q ss_pred HHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCC---ccEEE--E-ecC--CCCcccCCCHHHHHHHHHH
Q 018147 227 LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT---VRALV--V-INP--GNPTGQVLAEENQRAIVDF 298 (360)
Q Consensus 227 ~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~---~k~ii--l-~~P--~NPTG~~~~~~~l~~i~~l 298 (360)
.+.+.+..++.++..+.+.++.+|.+.++.+.+.-+.-...+.. ...++ . ..| ..+.|..++++|+++|++.
T Consensus 26 ~~Id~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~y 105 (445)
T cd06569 26 KLLDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKY 105 (445)
T ss_pred HHHHHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHH
Confidence 34566777899999999988888988877766543210000000 00010 0 011 1244678999999999999
Q ss_pred HHHcCCEEEE
Q 018147 299 CKKEGLVLLA 308 (360)
Q Consensus 299 a~~~~i~lI~ 308 (360)
|+++||-||-
T Consensus 106 A~~rgI~VIP 115 (445)
T cd06569 106 AKARHIEVIP 115 (445)
T ss_pred HHHcCCEEEE
Confidence 9999988764
No 443
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=69.12 E-value=67 Score=33.33 Aligned_cols=100 Identities=17% Similarity=0.165 Sum_probs=59.0
Q ss_pred cCChHHHHHHHHHHHccCCCCEEEEcCCCc-hH------HHHHHHHcCC-eE-EEeecCCCCCcCCCHHHHHHHHHHHHh
Q 018147 196 TDGASPAVHMMMQLLIRSENDGILCPIPQY-PL------YSASIALHGG-TL-VPYYLDEATGWGLETSEVKKQLEAAKA 266 (360)
Q Consensus 196 t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y-~~------~~~~~~~~g~-~~-~~v~~~~~~~~~~d~~~L~~~i~~~~~ 266 (360)
-.+...|...+..++. .+..|++..-+- .+ ....++..|+ .+ ..+|-.-.++|+++.+.+++..+.
T Consensus 52 l~~m~~a~~ri~~ai~--~~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~~~~~--- 126 (575)
T PRK11070 52 LSGIEKAVELLYNALR--EGTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQAHAR--- 126 (575)
T ss_pred hhCHHHHHHHHHHHHH--CCCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHHHHhc---
Confidence 4667777777777764 455665544211 11 2344566777 34 345654456799999998887654
Q ss_pred cCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCC
Q 018147 267 KGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVY 312 (360)
Q Consensus 267 ~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY 312 (360)
.+++||.+... ++ + . +.++.|++.|+-+|+=+-|
T Consensus 127 ---~~~LiItvD~G--i~---~---~-e~i~~a~~~gidvIVtDHH 160 (575)
T PRK11070 127 ---GAQLIVTVDNG--IS---S---H-AGVAHAHALGIPVLVTDHH 160 (575)
T ss_pred ---CCCEEEEEcCC--cC---C---H-HHHHHHHHCCCCEEEECCC
Confidence 56777766432 22 2 2 3345688889855543333
No 444
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=68.92 E-value=89 Score=28.17 Aligned_cols=101 Identities=12% Similarity=0.032 Sum_probs=53.9
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHH---HHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
..+++|.|+...=..+...|.. .|-+|++..-.-...... ++..|.++..+++|-. |.+.+++++.+..++
T Consensus 11 k~~lItGa~~~iG~~ia~~l~~-~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 11 KIALITGASYGIGFAIAKAYAK-AGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVT-----DEDGVQAMVSQIEKE 84 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHHHHHHHh
Confidence 4456665544333445555663 787887765443333222 3334667777777643 677888877765444
Q ss_pred CCCccEEEEecCCCCcc--cCCCHHHHHHHHH
Q 018147 268 GITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (360)
Q Consensus 268 g~~~k~iil~~P~NPTG--~~~~~~~l~~i~~ 297 (360)
-.++.+++.+......+ ...+.++++++.+
T Consensus 85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~ 116 (265)
T PRK07097 85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVID 116 (265)
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 33567766553321111 1334555655443
No 445
>PRK08263 short chain dehydrogenase; Provisional
Probab=68.87 E-value=92 Score=28.30 Aligned_cols=79 Identities=16% Similarity=0.159 Sum_probs=41.6
Q ss_pred CEEEcCChHHHH-HHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCC
Q 018147 192 DIFLTDGASPAV-HMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (360)
Q Consensus 192 ~I~~t~Ga~~al-~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~ 270 (360)
.+++|.| +.++ ..+...|.. .|..|++..-.-..........+..+..+.+|-. |.+.+++.++...++..+
T Consensus 5 ~vlItGa-sg~iG~~~a~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~~~ 77 (275)
T PRK08263 5 VWFITGA-SRGFGRAWTEAALE-RGDRVVATARDTATLADLAEKYGDRLLPLALDVT-----DRAAVFAAVETAVEHFGR 77 (275)
T ss_pred EEEEeCC-CChHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHhccCCeeEEEccCC-----CHHHHHHHHHHHHHHcCC
Confidence 3555544 4444 344455553 7888877664433333333434445555555532 567777776654433335
Q ss_pred ccEEEEe
Q 018147 271 VRALVVI 277 (360)
Q Consensus 271 ~k~iil~ 277 (360)
+.+++.+
T Consensus 78 ~d~vi~~ 84 (275)
T PRK08263 78 LDIVVNN 84 (275)
T ss_pred CCEEEEC
Confidence 6665544
No 446
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=68.83 E-value=84 Score=27.84 Aligned_cols=83 Identities=12% Similarity=0.062 Sum_probs=46.1
Q ss_pred CCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCch-HHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP-LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 189 ~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
....+++|.|+...=..+.+.|.. .|-.|++....-. .....++..+.++..+++|-. +.+.+++.++...+.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~-~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAE-AGADIVGAGRSEPSETQQQVEALGRRFLSLTADLS-----DIEAIKALVDSAVEE 77 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 334566666554433445566664 7888877664321 222333444666666666533 577777777654443
Q ss_pred CCCccEEEEe
Q 018147 268 GITVRALVVI 277 (360)
Q Consensus 268 g~~~k~iil~ 277 (360)
..++..++.+
T Consensus 78 ~~~~d~li~~ 87 (248)
T TIGR01832 78 FGHIDILVNN 87 (248)
T ss_pred cCCCCEEEEC
Confidence 3356666543
No 447
>PRK07791 short chain dehydrogenase; Provisional
Probab=68.78 E-value=97 Score=28.54 Aligned_cols=99 Identities=17% Similarity=0.090 Sum_probs=51.8
Q ss_pred CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCc---------hHHHH---HHHHcCCeEEEeecCCCCCcCCCHHHHHH
Q 018147 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY---------PLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKK 259 (360)
Q Consensus 192 ~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y---------~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~ 259 (360)
.+++|.|+...=..+...|.. .|..|++..-.. ..... .++..|.++..+.+|- -|.+.+++
T Consensus 8 ~~lITGas~GIG~aia~~la~-~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~v~~ 81 (286)
T PRK07791 8 VVIVTGAGGGIGRAHALAFAA-EGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDI-----ADWDGAAN 81 (286)
T ss_pred EEEEECCCchHHHHHHHHHHH-CCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCC-----CCHHHHHH
Confidence 455555544433445556664 788887764332 22222 2333466666666653 36777777
Q ss_pred HHHHHHhcCCCccEEEEecCCC-Ccc--cCCCHHHHHHHHH
Q 018147 260 QLEAAKAKGITVRALVVINPGN-PTG--QVLAEENQRAIVD 297 (360)
Q Consensus 260 ~i~~~~~~g~~~k~iil~~P~N-PTG--~~~~~~~l~~i~~ 297 (360)
.++...++..++..++ +|..- ..+ .-++.++++++.+
T Consensus 82 ~~~~~~~~~g~id~lv-~nAG~~~~~~~~~~~~~~~~~~~~ 121 (286)
T PRK07791 82 LVDAAVETFGGLDVLV-NNAGILRDRMIANMSEEEWDAVIA 121 (286)
T ss_pred HHHHHHHhcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 7776554433566555 33321 111 2245566665554
No 448
>PRK12743 oxidoreductase; Provisional
Probab=68.64 E-value=81 Score=28.27 Aligned_cols=80 Identities=16% Similarity=0.015 Sum_probs=44.8
Q ss_pred CEEEcCChHHHHHHHHHHHccCCCCEEEEcC-CCchH---HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 192 ~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~-P~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
.+++|.|+...=..+.+.|.. .|-+|++.. ..-.. ....++..|.++..+.+|-. |.+.+++++++..++
T Consensus 4 ~vlItGas~giG~~~a~~l~~-~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~ 77 (256)
T PRK12743 4 VAIVTASDSGIGKACALLLAQ-QGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLS-----DLPEGAQALDKLIQR 77 (256)
T ss_pred EEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 355555544333445556664 888887653 22222 22333445767776666633 677777777665544
Q ss_pred CCCccEEEEe
Q 018147 268 GITVRALVVI 277 (360)
Q Consensus 268 g~~~k~iil~ 277 (360)
..++.+|+.+
T Consensus 78 ~~~id~li~~ 87 (256)
T PRK12743 78 LGRIDVLVNN 87 (256)
T ss_pred cCCCCEEEEC
Confidence 4466666654
No 449
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=68.63 E-value=83 Score=27.88 Aligned_cols=81 Identities=10% Similarity=0.028 Sum_probs=44.1
Q ss_pred CEEEcCChHHHHHHHHHHHccCCCCEEEEc-CCCchH---HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 192 DIFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 192 ~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~-~P~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
.+++|.|+...=..+.+.|.. .|.+|++. ...-.. ....++..+.++..+.+|.. |.+.+++++++..++
T Consensus 6 ~vlItGa~g~iG~~~a~~l~~-~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 6 VALVTGSSRGIGKAIALRLAE-EGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVG-----DVEKIKEMFAQIDEE 79 (250)
T ss_pred EEEEeCCCchHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 455555543333445556664 78787653 211111 12233445677777776643 677788777765444
Q ss_pred CCCccEEEEec
Q 018147 268 GITVRALVVIN 278 (360)
Q Consensus 268 g~~~k~iil~~ 278 (360)
..++.+++.+.
T Consensus 80 ~~~id~vi~~a 90 (250)
T PRK08063 80 FGRLDVFVNNA 90 (250)
T ss_pred cCCCCEEEECC
Confidence 33566666553
No 450
>PRK06128 oxidoreductase; Provisional
Probab=68.54 E-value=76 Score=29.41 Aligned_cols=101 Identities=16% Similarity=0.030 Sum_probs=52.8
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCc-----hHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHH
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-----PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y-----~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 265 (360)
..+++|.|+...=..+...|.. .|..|++....- ......++..|.++..+.+|-. |.+.+++++++..
T Consensus 56 k~vlITGas~gIG~~~a~~l~~-~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~ 129 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFAR-EGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLK-----DEAFCRQLVERAV 129 (300)
T ss_pred CEEEEecCCCcHHHHHHHHHHH-cCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCC-----CHHHHHHHHHHHH
Confidence 4566666544433455556664 788887643211 1122334445777777776633 6777777776654
Q ss_pred hcCCCccEEEEecCCC-Cc--ccCCCHHHHHHHHH
Q 018147 266 AKGITVRALVVINPGN-PT--GQVLAEENQRAIVD 297 (360)
Q Consensus 266 ~~g~~~k~iil~~P~N-PT--G~~~~~~~l~~i~~ 297 (360)
+...++.++|.+-... +. -.-++.+++++..+
T Consensus 130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~ 164 (300)
T PRK06128 130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFK 164 (300)
T ss_pred HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHH
Confidence 4333566665442211 11 12235566665444
No 451
>PRK06484 short chain dehydrogenase; Validated
Probab=68.27 E-value=70 Score=32.24 Aligned_cols=80 Identities=11% Similarity=0.069 Sum_probs=46.9
Q ss_pred CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCc
Q 018147 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (360)
Q Consensus 192 ~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~ 271 (360)
.+++|.|+...=..+.+.|. ..|..|++..-.-.......+..|.++..+.+|-. |.+.++++++...++..++
T Consensus 7 ~~lITGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 7 VVLVTGAAGGIGRAACQRFA-RAGDQVVVADRNVERARERADSLGPDHHALAMDVS-----DEAQIREGFEQLHREFGRI 80 (520)
T ss_pred EEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccC-----CHHHHHHHHHHHHHHhCCC
Confidence 35555544433344555566 48888887754444445555556767766666533 6777877777654443456
Q ss_pred cEEEEe
Q 018147 272 RALVVI 277 (360)
Q Consensus 272 k~iil~ 277 (360)
..++.+
T Consensus 81 D~li~n 86 (520)
T PRK06484 81 DVLVNN 86 (520)
T ss_pred CEEEEC
Confidence 655533
No 452
>PRK05854 short chain dehydrogenase; Provisional
Probab=67.90 E-value=75 Score=29.81 Aligned_cols=79 Identities=19% Similarity=0.168 Sum_probs=43.3
Q ss_pred CEEEcCChHHHH-HHHHHHHccCCCCEEEEcCCCchHHHHHHHH----c-CCeEEEeecCCCCCcCCCHHHHHHHHHHHH
Q 018147 192 DIFLTDGASPAV-HMMMQLLIRSENDGILCPIPQYPLYSASIAL----H-GGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (360)
Q Consensus 192 ~I~~t~Ga~~al-~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~----~-g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 265 (360)
.+++|. ++.+| ..+.+.|.. .|-+|++..-.-......++. . +.++..+.+|-. |.+.+++.++...
T Consensus 16 ~~lITG-as~GIG~~~a~~La~-~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~-----d~~sv~~~~~~~~ 88 (313)
T PRK05854 16 RAVVTG-ASDGLGLGLARRLAA-AGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLS-----SLASVAALGEQLR 88 (313)
T ss_pred EEEEeC-CCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCC-----CHHHHHHHHHHHH
Confidence 455554 44555 444555664 788888765443333222221 2 345666666533 6788888777655
Q ss_pred hcCCCccEEEEe
Q 018147 266 AKGITVRALVVI 277 (360)
Q Consensus 266 ~~g~~~k~iil~ 277 (360)
++..++..+|.+
T Consensus 89 ~~~~~iD~li~n 100 (313)
T PRK05854 89 AEGRPIHLLINN 100 (313)
T ss_pred HhCCCccEEEEC
Confidence 444456655533
No 453
>PRK08309 short chain dehydrogenase; Provisional
Probab=67.89 E-value=79 Score=27.20 Aligned_cols=96 Identities=10% Similarity=0.071 Sum_probs=52.3
Q ss_pred EEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHc--CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCC
Q 018147 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (360)
Q Consensus 193 I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~--g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~ 270 (360)
+++|.|+ .-+..+...|.. .|..|.+..-............ +..+..+++|- -|.+.+.+.++...++..+
T Consensus 3 vlVtGGt-G~gg~la~~L~~-~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv-----~d~~sv~~~i~~~l~~~g~ 75 (177)
T PRK08309 3 ALVIGGT-GMLKRVSLWLCE-KGFHVSVIARREVKLENVKRESTTPESITPLPLDY-----HDDDALKLAIKSTIEKNGP 75 (177)
T ss_pred EEEECcC-HHHHHHHHHHHH-CcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccC-----CCHHHHHHHHHHHHHHcCC
Confidence 5666654 445557777774 8888887653322222222212 23455555543 3678888877765444333
Q ss_pred ccEEEEe-cCCCCcccCCCHHHHHHHHHHHHHcCCE
Q 018147 271 VRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGLV 305 (360)
Q Consensus 271 ~k~iil~-~P~NPTG~~~~~~~l~~i~~la~~~~i~ 305 (360)
...++.. +..- -+.++++|++.++-
T Consensus 76 id~lv~~vh~~~----------~~~~~~~~~~~gv~ 101 (177)
T PRK08309 76 FDLAVAWIHSSA----------KDALSVVCRELDGS 101 (177)
T ss_pred CeEEEEeccccc----------hhhHHHHHHHHccC
Confidence 4333322 3332 36677888887743
No 454
>PRK07109 short chain dehydrogenase; Provisional
Probab=67.85 E-value=1.1e+02 Score=29.07 Aligned_cols=78 Identities=18% Similarity=0.177 Sum_probs=44.4
Q ss_pred CCEEEcCChHHHH-HHHHHHHccCCCCEEEEcCCCchHHH---HHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHh
Q 018147 191 NDIFLTDGASPAV-HMMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (360)
Q Consensus 191 ~~I~~t~Ga~~al-~~~~~~l~~~~gd~Vlv~~P~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 266 (360)
..+++|. ++.+| ..+.+.|.. .|.+|++..-.-.... ..++..|.++..+.+|-. |.+.++++++...+
T Consensus 9 k~vlITG-as~gIG~~la~~la~-~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~-----d~~~v~~~~~~~~~ 81 (334)
T PRK07109 9 QVVVITG-ASAGVGRATARAFAR-RGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVA-----DAEAVQAAADRAEE 81 (334)
T ss_pred CEEEEEC-CCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCC-----CHHHHHHHHHHHHH
Confidence 3455554 44455 444456664 7888877664433222 233445777777776643 67778777766544
Q ss_pred cCCCccEEE
Q 018147 267 KGITVRALV 275 (360)
Q Consensus 267 ~g~~~k~ii 275 (360)
+-.++..++
T Consensus 82 ~~g~iD~lI 90 (334)
T PRK07109 82 ELGPIDTWV 90 (334)
T ss_pred HCCCCCEEE
Confidence 333566554
No 455
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=67.84 E-value=79 Score=27.99 Aligned_cols=80 Identities=15% Similarity=0.114 Sum_probs=42.0
Q ss_pred CEEEcCChHHHH-HHHHHHHccCCCCEEEEc-CCCchH---HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHh
Q 018147 192 DIFLTDGASPAV-HMMMQLLIRSENDGILCP-IPQYPL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (360)
Q Consensus 192 ~I~~t~Ga~~al-~~~~~~l~~~~gd~Vlv~-~P~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 266 (360)
.+++..|++.+| ..+.+.|. ..|.+|++. ...-.. ....++..+.++..+.+|-. |.+.+++++++..+
T Consensus 4 k~~lVtG~s~giG~~~a~~l~-~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 77 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLH-KDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVG-----DWDSTKAAFDKVKA 77 (246)
T ss_pred CEEEEECCCChHHHHHHHHHH-HcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 344444444444 44555666 478777763 211111 12223334667766666533 67777777766544
Q ss_pred cCCCccEEEEe
Q 018147 267 KGITVRALVVI 277 (360)
Q Consensus 267 ~g~~~k~iil~ 277 (360)
...++..|+.+
T Consensus 78 ~~~~id~li~~ 88 (246)
T PRK12938 78 EVGEIDVLVNN 88 (246)
T ss_pred HhCCCCEEEEC
Confidence 43456666644
No 456
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=67.73 E-value=18 Score=34.00 Aligned_cols=75 Identities=9% Similarity=0.202 Sum_probs=44.5
Q ss_pred CCCchHHHHHHHHc--CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHH
Q 018147 222 IPQYPLYSASIALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (360)
Q Consensus 222 ~P~y~~~~~~~~~~--g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la 299 (360)
-|+|+...++.+.. ..-++.+|.. .-++.++++.+. .+|.+++...+. ++.+.++|.++|
T Consensus 49 ~~~y~sv~dlp~~~~~Dlavi~vpa~------~v~~~l~e~~~~------Gvk~avIis~Gf------~e~~~~~l~~~a 110 (286)
T TIGR01019 49 LPVFDSVKEAVEETGANASVIFVPAP------FAADAIFEAIDA------GIELIVCITEGI------PVHDMLKVKRYM 110 (286)
T ss_pred eeccCCHHHHhhccCCCEEEEecCHH------HHHHHHHHHHHC------CCCEEEEECCCC------CHHHHHHHHHHH
Confidence 34566666555432 3334444321 124555665554 678777765442 334568899999
Q ss_pred HHcCCEEEEccCCCC
Q 018147 300 KKEGLVLLADEVYQE 314 (360)
Q Consensus 300 ~~~~i~lI~DeaY~~ 314 (360)
+++|+.+|==.+.+-
T Consensus 111 ~~~girilGPNc~Gi 125 (286)
T TIGR01019 111 EESGTRLIGPNCPGI 125 (286)
T ss_pred HHcCCEEECCCCceE
Confidence 999988876555544
No 457
>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed
Probab=67.57 E-value=67 Score=29.80 Aligned_cols=56 Identities=16% Similarity=0.284 Sum_probs=41.5
Q ss_pred CCHHHHHHHHHHHHhcC--CCccEEEEecCCCCcccCCCHHHHHHHHHHHHH-----cCCEEEEccCCCC
Q 018147 252 LETSEVKKQLEAAKAKG--ITVRALVVINPGNPTGQVLAEENQRAIVDFCKK-----EGLVLLADEVYQE 314 (360)
Q Consensus 252 ~d~~~L~~~i~~~~~~g--~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~-----~~i~lI~DeaY~~ 314 (360)
++.+.+++.++.....+ .+.++|. +|.+.+.+..+.+.+++++ .+..+|+|-+..+
T Consensus 68 ~~~~~i~~~l~~~~~~~~l~~~d~i~-------~G~l~s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm~d 130 (281)
T PRK08176 68 IPDEWFSGYLRALQERDALRQLRAVT-------TGYMGSASQIKILAEWLTALRADHPDLLIMVDPVIGD 130 (281)
T ss_pred CCHHHHHHHHHHHHhcCccccCCEEE-------ECCCCCHHHHHHHHHHHHHHHHHCCCCcEEeCCcccc
Confidence 45677777776554443 2577888 7999999999999999876 3678999988544
No 458
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=67.20 E-value=93 Score=27.76 Aligned_cols=81 Identities=12% Similarity=0.072 Sum_probs=46.0
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHH---HHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
..+++|.|+...=..+.+.|.. .|-+|++..-.-.... ..++..|.++..+.+|-. |.+.+++++....++
T Consensus 11 k~vlItGa~g~iG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 84 (255)
T PRK07523 11 RRALVTGSSQGIGYALAEGLAQ-AGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVT-----DHDAVRAAIDAFEAE 84 (255)
T ss_pred CEEEEECCcchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCC-----CHHHHHHHHHHHHHh
Confidence 4566666544333445555664 7888887664433222 223344666766666533 677788777765444
Q ss_pred CCCccEEEEe
Q 018147 268 GITVRALVVI 277 (360)
Q Consensus 268 g~~~k~iil~ 277 (360)
..++.+++.+
T Consensus 85 ~~~~d~li~~ 94 (255)
T PRK07523 85 IGPIDILVNN 94 (255)
T ss_pred cCCCCEEEEC
Confidence 4456666544
No 459
>PRK06484 short chain dehydrogenase; Validated
Probab=66.98 E-value=78 Score=31.93 Aligned_cols=99 Identities=13% Similarity=0.096 Sum_probs=54.7
Q ss_pred CEEEcCChHHHHHH-HHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCC
Q 018147 192 DIFLTDGASPAVHM-MMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (360)
Q Consensus 192 ~I~~t~Ga~~al~~-~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~ 270 (360)
.+++..|++.+|-. +.+.|. ..|..|++..-.-.......+..+.++..+.+|-. |.+.+++.++...++..+
T Consensus 270 k~~lItGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g~ 343 (520)
T PRK06484 270 RVVAITGGARGIGRAVADRFA-AAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADIT-----DEAAVESAFAQIQARWGR 343 (520)
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCC-----CHHHHHHHHHHHHHHcCC
Confidence 44455555555544 444565 47888888765544445555555666666666533 677777777665444335
Q ss_pred ccEEEEecCC-C-Ccc--cCCCHHHHHHHHH
Q 018147 271 VRALVVINPG-N-PTG--QVLAEENQRAIVD 297 (360)
Q Consensus 271 ~k~iil~~P~-N-PTG--~~~~~~~l~~i~~ 297 (360)
+..++ +|.. . +.+ .-.+.+++++..+
T Consensus 344 id~li-~nAg~~~~~~~~~~~~~~~~~~~~~ 373 (520)
T PRK06484 344 LDVLV-NNAGIAEVFKPSLEQSAEDFTRVYD 373 (520)
T ss_pred CCEEE-ECCCCcCCCCChhhCCHHHHHHHHH
Confidence 66555 3332 1 111 1235566665543
No 460
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=66.94 E-value=20 Score=32.63 Aligned_cols=56 Identities=25% Similarity=0.357 Sum_probs=39.5
Q ss_pred CCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 251 GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 251 ~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
.++.+.+.+.++...+ +.++++|. +|.+.+.+.++.|.++++++++.+|+|-+-.+
T Consensus 42 ~~~~~~~~~ql~~~~~-~~~~~aik-------iG~l~~~~~v~~i~~~l~~~~~~vV~DPVm~~ 97 (246)
T PF08543_consen 42 PVDSEMIKAQLDALLE-DMKFDAIK-------IGYLGSAEQVEIIADFLKKPKIPVVLDPVMGD 97 (246)
T ss_dssp E--HHHHHHHHHHHHH-TSC-SEEE-------E-S-SSHHHHHHHHHHHHHTTTEEEEE---EE
T ss_pred ECCHHHHHHHHHHhcc-cccccEEE-------EcccCCchhhhhHHHHHhccCCCEEEeccccc
Confidence 3467778777776554 34788888 89999999999999999989999999988764
No 461
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=66.85 E-value=95 Score=27.70 Aligned_cols=81 Identities=12% Similarity=0.052 Sum_probs=45.1
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHH---HHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
..+++|.|+..-=..+.+.|.+ .|..|++..-.-...... ++..+.++..+++|-. |.+.+++.+....++
T Consensus 10 k~~lItGas~giG~~ia~~L~~-~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~ 83 (254)
T PRK08085 10 KNILITGSAQGIGFLLATGLAE-YGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVT-----HKQEVEAAIEHIEKD 83 (254)
T ss_pred CEEEEECCCChHHHHHHHHHHH-cCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCC-----CHHHHHHHHHHHHHh
Confidence 4466665544433455556664 788888766432222222 2333556666666533 567777777665444
Q ss_pred CCCccEEEEe
Q 018147 268 GITVRALVVI 277 (360)
Q Consensus 268 g~~~k~iil~ 277 (360)
..++..++.+
T Consensus 84 ~~~id~vi~~ 93 (254)
T PRK08085 84 IGPIDVLINN 93 (254)
T ss_pred cCCCCEEEEC
Confidence 4456666654
No 462
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=66.81 E-value=84 Score=29.38 Aligned_cols=56 Identities=25% Similarity=0.292 Sum_probs=36.2
Q ss_pred CCHHHHHHHHHHHHh--cCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHc-----CCEEEEccCCCC
Q 018147 252 LETSEVKKQLEAAKA--KGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE-----GLVLLADEVYQE 314 (360)
Q Consensus 252 ~d~~~L~~~i~~~~~--~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~-----~i~lI~DeaY~~ 314 (360)
+..|.+.+.++...+ .....++|+ ||..-+.++.+.|+++.++. ++++++|-+-++
T Consensus 53 ~~~e~l~~~l~~l~~~~~~~~~davl-------tGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD 115 (281)
T COG2240 53 MPPEQLADLLNGLEAIDKLGECDAVL-------TGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGD 115 (281)
T ss_pred CCHHHHHHHHHHHHhcccccccCEEE-------EccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccC
Confidence 345666666655433 234566777 78888888877777776542 567788877665
No 463
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=66.68 E-value=21 Score=34.93 Aligned_cols=110 Identities=16% Similarity=0.195 Sum_probs=61.6
Q ss_pred cCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcC-CCHHHHHHHHHHHHhcCCCccEE
Q 018147 196 TDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWG-LETSEVKKQLEAAKAKGITVRAL 274 (360)
Q Consensus 196 t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~-~d~~~L~~~i~~~~~~g~~~k~i 274 (360)
..|-.++=..+...+-....+.=++.+++.+..... +....+---+.+|.+..|. .+.+.|.+.++... ...+++
T Consensus 72 vvG~Deag~~L~~~l~~~~i~~~l~~~~~r~T~~K~-Rv~s~nQQllRvD~Ee~~~~~~~~~ll~~~~~~l---~~~~~v 147 (467)
T COG2870 72 VVGKDEAGKALIELLKANGIDSDLLRDKNRPTIVKL-RVLSRNQQLLRLDFEEKFPIEDENKLLEKIKNAL---KSFDAL 147 (467)
T ss_pred eeccchhHHHHHHHHHhcCcccceEeecCCCceeee-eeecccceEEEecccccCcchhHHHHHHHHHHHh---hcCCEE
Confidence 345544444444444322233445556666544321 2222222233444443333 34455555555432 257889
Q ss_pred EEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 275 VVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 275 il~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
+++... -|...+ .++++++|++.|+.+++|-==.+
T Consensus 148 VLSDY~--KG~L~~---~q~~I~~ar~~~~pVLvDPKg~D 182 (467)
T COG2870 148 VLSDYA--KGVLTN---VQKMIDLAREAGIPVLVDPKGKD 182 (467)
T ss_pred EEeccc--cccchh---HHHHHHHHHHcCCcEEECCCCcc
Confidence 998765 466555 89999999999999999955444
No 464
>PRK08278 short chain dehydrogenase; Provisional
Probab=65.72 E-value=1.1e+02 Score=27.92 Aligned_cols=81 Identities=15% Similarity=0.133 Sum_probs=45.5
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCch----------HHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHH
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP----------LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQ 260 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~----------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~ 260 (360)
..+++|.|+...=..+.+.|.. .|..|++...... .....++..|.++..+.+|-. +.+.+++.
T Consensus 7 k~vlItGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~-----~~~~i~~~ 80 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAAR-DGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVR-----DEDQVAAA 80 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHH-CCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCC-----CHHHHHHH
Confidence 3456555544433445556664 7888887664332 112223445667777766633 67778777
Q ss_pred HHHHHhcCCCccEEEEe
Q 018147 261 LEAAKAKGITVRALVVI 277 (360)
Q Consensus 261 i~~~~~~g~~~k~iil~ 277 (360)
++...++..++.+++.+
T Consensus 81 ~~~~~~~~g~id~li~~ 97 (273)
T PRK08278 81 VAKAVERFGGIDICVNN 97 (273)
T ss_pred HHHHHHHhCCCCEEEEC
Confidence 76544433356666644
No 465
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=65.38 E-value=81 Score=29.23 Aligned_cols=99 Identities=15% Similarity=0.169 Sum_probs=53.1
Q ss_pred CEEEcCChHHHHHHHHH-HHccCCCCEEEEcCCCchHHHH----HHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHh
Q 018147 192 DIFLTDGASPAVHMMMQ-LLIRSENDGILCPIPQYPLYSA----SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (360)
Q Consensus 192 ~I~~t~Ga~~al~~~~~-~l~~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 266 (360)
..++.+|++.+|-..+. .|. ..|..|++..-.=.-... .-...|.++..+++|-. +.+++++...+...
T Consensus 7 ~~~lITGASsGIG~~~A~~lA-~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs-----~~~~~~~l~~~l~~ 80 (265)
T COG0300 7 KTALITGASSGIGAELAKQLA-RRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLS-----DPEALERLEDELKE 80 (265)
T ss_pred cEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCC-----ChhHHHHHHHHHHh
Confidence 35556667777755444 455 478887777655543333 33335677777777643 44555555444333
Q ss_pred cCCCccEEEEecCCC-Ccc--cCCCHHHHHHHHH
Q 018147 267 KGITVRALVVINPGN-PTG--QVLAEENQRAIVD 297 (360)
Q Consensus 267 ~g~~~k~iil~~P~N-PTG--~~~~~~~l~~i~~ 297 (360)
.+..+. ++|||..- -.| .-.+.++.+++.+
T Consensus 81 ~~~~Id-vLVNNAG~g~~g~f~~~~~~~~~~mi~ 113 (265)
T COG0300 81 RGGPID-VLVNNAGFGTFGPFLELSLDEEEEMIQ 113 (265)
T ss_pred cCCccc-EEEECCCcCCccchhhCChHHHHHHHH
Confidence 333443 55666642 223 2334455555554
No 466
>PRK07985 oxidoreductase; Provisional
Probab=65.22 E-value=1.1e+02 Score=28.23 Aligned_cols=100 Identities=12% Similarity=0.004 Sum_probs=51.3
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCc-----hHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHH
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-----PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y-----~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 265 (360)
..+++|.|+...=..+.+.|.. .|..|++....- ......+...|.++..+.+|-. |.+.++++++...
T Consensus 50 k~vlITGas~gIG~aia~~L~~-~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~ 123 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAR-EGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLS-----DEKFARSLVHEAH 123 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHH-CCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCC-----CHHHHHHHHHHHH
Confidence 3455555544333445556664 888888754211 1122233445666666666533 6777777777654
Q ss_pred hcCCCccEEEEecCC-CC--cccCCCHHHHHHHH
Q 018147 266 AKGITVRALVVINPG-NP--TGQVLAEENQRAIV 296 (360)
Q Consensus 266 ~~g~~~k~iil~~P~-NP--TG~~~~~~~l~~i~ 296 (360)
++..++..++.+... .+ .-.-.+.+++++..
T Consensus 124 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 157 (294)
T PRK07985 124 KALGGLDIMALVAGKQVAIPDIADLTSEQFQKTF 157 (294)
T ss_pred HHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHH
Confidence 443456655543211 11 12234556665533
No 467
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=65.14 E-value=1e+02 Score=27.59 Aligned_cols=82 Identities=15% Similarity=0.100 Sum_probs=44.5
Q ss_pred CCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCc-hH---HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHH
Q 018147 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-PL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (360)
Q Consensus 190 ~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y-~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 265 (360)
...+++|.|+...=..+.+.|.. .|..|++....= .. ....++..+.++..+++|-. |.+.+++.++...
T Consensus 7 ~k~~lItGa~~gIG~~ia~~l~~-~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~-----~~~~i~~~~~~~~ 80 (261)
T PRK08936 7 GKVVVITGGSTGLGRAMAVRFGK-EKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVT-----VESDVVNLIQTAV 80 (261)
T ss_pred CCEEEEeCCCChHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCC-----CHHHHHHHHHHHH
Confidence 34566666555444455566664 787776643211 11 22233344666666666643 5677777776544
Q ss_pred hcCCCccEEEEe
Q 018147 266 AKGITVRALVVI 277 (360)
Q Consensus 266 ~~g~~~k~iil~ 277 (360)
++..++.+++.+
T Consensus 81 ~~~g~id~lv~~ 92 (261)
T PRK08936 81 KEFGTLDVMINN 92 (261)
T ss_pred HHcCCCCEEEEC
Confidence 443456666544
No 468
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=65.12 E-value=25 Score=28.56 Aligned_cols=58 Identities=12% Similarity=0.205 Sum_probs=45.4
Q ss_pred CeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEe--cC---CCCcccCCCHHHHHHHHHHHHHcCC
Q 018147 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI--NP---GNPTGQVLAEENQRAIVDFCKKEGL 304 (360)
Q Consensus 237 ~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~--~P---~NPTG~~~~~~~l~~i~~la~~~~i 304 (360)
.+++.+|+.. .+|++.+.+++.+ ....|++. .| |+..|.......++.+-++..+.|+
T Consensus 29 vriIrvpC~G----rv~~~~il~Af~~------GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~Gi 91 (124)
T PF02662_consen 29 VRIIRVPCSG----RVDPEFILRAFEK------GADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELGI 91 (124)
T ss_pred eEEEEccCCC----ccCHHHHHHHHHc------CCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcCC
Confidence 5677777763 7899999999987 67777773 54 5689999888888888888888774
No 469
>PRK06482 short chain dehydrogenase; Provisional
Probab=65.01 E-value=1.1e+02 Score=27.74 Aligned_cols=79 Identities=19% Similarity=0.156 Sum_probs=42.6
Q ss_pred EEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCcc
Q 018147 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVR 272 (360)
Q Consensus 193 I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k 272 (360)
+++|.|+..-=..+...|. ..|..|++..-............+.++..+.+|-. |.+.+++.+.+..++..++.
T Consensus 5 vlVtGasg~IG~~la~~L~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~~~id 78 (276)
T PRK06482 5 WFITGASSGFGRGMTERLL-ARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVT-----DSAAVRAVVDRAFAALGRID 78 (276)
T ss_pred EEEecCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCC-----CHHHHHHHHHHHHHHcCCCC
Confidence 5666554333334455565 47888887665443333333333445555555432 56777777765443333566
Q ss_pred EEEEe
Q 018147 273 ALVVI 277 (360)
Q Consensus 273 ~iil~ 277 (360)
.|+.+
T Consensus 79 ~vi~~ 83 (276)
T PRK06482 79 VVVSN 83 (276)
T ss_pred EEEEC
Confidence 56544
No 470
>PRK08643 acetoin reductase; Validated
Probab=64.78 E-value=1e+02 Score=27.43 Aligned_cols=79 Identities=11% Similarity=0.085 Sum_probs=43.6
Q ss_pred EEEcCChHHHH-HHHHHHHccCCCCEEEEcCCCchHHHH---HHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcC
Q 018147 193 IFLTDGASPAV-HMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (360)
Q Consensus 193 I~~t~Ga~~al-~~~~~~l~~~~gd~Vlv~~P~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g 268 (360)
+++|. ++.+| ..+.+.|. ..|.+|++.+-.-..... .+...+.++..+.+|-. |.+.+++.++...++.
T Consensus 5 ~lItG-as~giG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~ 77 (256)
T PRK08643 5 ALVTG-AGQGIGFAIAKRLV-EDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVS-----DRDQVFAAVRQVVDTF 77 (256)
T ss_pred EEEEC-CCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCC-----CHHHHHHHHHHHHHHc
Confidence 44554 44444 44555566 478888776533222222 22334566666666533 6777877777655544
Q ss_pred CCccEEEEec
Q 018147 269 ITVRALVVIN 278 (360)
Q Consensus 269 ~~~k~iil~~ 278 (360)
.++..++.+.
T Consensus 78 ~~id~vi~~a 87 (256)
T PRK08643 78 GDLNVVVNNA 87 (256)
T ss_pred CCCCEEEECC
Confidence 4677766553
No 471
>PRK07062 short chain dehydrogenase; Provisional
Probab=64.52 E-value=1.1e+02 Score=27.53 Aligned_cols=81 Identities=20% Similarity=0.114 Sum_probs=42.7
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHH---H-c-CCeEEEeecCCCCCcCCCHHHHHHHHHHHH
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---L-H-GGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~---~-~-g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 265 (360)
..+++|.|+...=..+.+.|. ..|.+|++....-.......+ . . +.++..+++|- -|.+.+++.++...
T Consensus 9 k~~lItGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~ 82 (265)
T PRK07062 9 RVAVVTGGSSGIGLATVELLL-EAGASVAICGRDEERLASAEARLREKFPGARLLAARCDV-----LDEADVAAFAAAVE 82 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecC-----CCHHHHHHHHHHHH
Confidence 345555544433344555565 378888877654333222222 1 2 34666666653 36777777776654
Q ss_pred hcCCCccEEEEe
Q 018147 266 AKGITVRALVVI 277 (360)
Q Consensus 266 ~~g~~~k~iil~ 277 (360)
+...++..++.+
T Consensus 83 ~~~g~id~li~~ 94 (265)
T PRK07062 83 ARFGGVDMLVNN 94 (265)
T ss_pred HhcCCCCEEEEC
Confidence 433356655433
No 472
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=64.19 E-value=1e+02 Score=27.27 Aligned_cols=82 Identities=16% Similarity=0.085 Sum_probs=46.7
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHH---HHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
..+++|.|+...=..+.+.|.. .|.+|++..-.-..... .++..+.++..+.+|- -|.+.+.++++...+.
T Consensus 5 ~~vlItG~sg~iG~~la~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 78 (258)
T PRK12429 5 KVALVTGAASGIGLEIALALAK-EGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDV-----TDEEAINAGIDYAVET 78 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 3566666544444455566664 78888776544333222 2333466666666653 2677777777665444
Q ss_pred CCCccEEEEec
Q 018147 268 GITVRALVVIN 278 (360)
Q Consensus 268 g~~~k~iil~~ 278 (360)
...+.+|+.+.
T Consensus 79 ~~~~d~vi~~a 89 (258)
T PRK12429 79 FGGVDILVNNA 89 (258)
T ss_pred cCCCCEEEECC
Confidence 34577776653
No 473
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=64.16 E-value=15 Score=35.04 Aligned_cols=79 Identities=8% Similarity=0.105 Sum_probs=44.8
Q ss_pred HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEE
Q 018147 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (360)
Q Consensus 228 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI 307 (360)
+...+..++.+...+.+.+ +|.+..+.....-+........++.--.....-+.+..++++|+++|++.|+++||-||
T Consensus 22 ~id~ma~~K~N~lhlHltD--~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~vI 99 (326)
T cd06564 22 IIKTMSWYKMNDLQLHLND--NLIFNLDDMSTTVNNATYASDDVKSGNNYYNLTANDGYYTKEEFKELIAYAKDRGVNII 99 (326)
T ss_pred HHHHHHHcCCceEEEeecC--CcccccCCCchhhhhhhhhccccccccccCCCCCCCCcccHHHHHHHHHHHHHcCCeEe
Confidence 4455666788888888876 45554433222111100000011100000112346778999999999999999998776
Q ss_pred E
Q 018147 308 A 308 (360)
Q Consensus 308 ~ 308 (360)
-
T Consensus 100 P 100 (326)
T cd06564 100 P 100 (326)
T ss_pred c
Confidence 4
No 474
>PRK07825 short chain dehydrogenase; Provisional
Probab=64.16 E-value=1.1e+02 Score=27.60 Aligned_cols=78 Identities=17% Similarity=0.074 Sum_probs=39.7
Q ss_pred CEEEcCChHHHHH-HHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCC
Q 018147 192 DIFLTDGASPAVH-MMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (360)
Q Consensus 192 ~I~~t~Ga~~al~-~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~ 270 (360)
.+++|. ++.+|- .+.+.|. ..|-.|++..-.-.......+..+ ++..+.+|-. |.+.++++++...+...+
T Consensus 7 ~ilVtG-asggiG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~D~~-----~~~~~~~~~~~~~~~~~~ 78 (273)
T PRK07825 7 VVAITG-GARGIGLATARALA-ALGARVAIGDLDEALAKETAAELG-LVVGGPLDVT-----DPASFAAFLDAVEADLGP 78 (273)
T ss_pred EEEEeC-CCchHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhc-cceEEEccCC-----CHHHHHHHHHHHHHHcCC
Confidence 455554 445553 4445555 378888776543333333333333 2333444422 567777777665443334
Q ss_pred ccEEEEe
Q 018147 271 VRALVVI 277 (360)
Q Consensus 271 ~k~iil~ 277 (360)
+..++.+
T Consensus 79 id~li~~ 85 (273)
T PRK07825 79 IDVLVNN 85 (273)
T ss_pred CCEEEEC
Confidence 5555433
No 475
>PRK08339 short chain dehydrogenase; Provisional
Probab=63.58 E-value=1.2e+02 Score=27.55 Aligned_cols=95 Identities=11% Similarity=0.110 Sum_probs=46.6
Q ss_pred CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHH----cCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 192 ~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
.+++|.|+...=..+.+.|. ..|.+|++..-.-.......+. .+.++..+.+|-. |.+.+++.++...+-
T Consensus 10 ~~lItGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~i~~~~~~~~~~ 83 (263)
T PRK08339 10 LAFTTASSKGIGFGVARVLA-RAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLT-----KREDLERTVKELKNI 83 (263)
T ss_pred EEEEeCCCCcHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCC-----CHHHHHHHHHHHHhh
Confidence 34555444333344555566 4888888876443333322222 2555656665533 566777666654322
Q ss_pred CCCccEEEEecCCCCc-cc--CCCHHHHHH
Q 018147 268 GITVRALVVINPGNPT-GQ--VLAEENQRA 294 (360)
Q Consensus 268 g~~~k~iil~~P~NPT-G~--~~~~~~l~~ 294 (360)
| ++..++ +|..-+. +. -.+.++|++
T Consensus 84 g-~iD~lv-~nag~~~~~~~~~~~~~~~~~ 111 (263)
T PRK08339 84 G-EPDIFF-FSTGGPKPGYFMEMSMEDWEG 111 (263)
T ss_pred C-CCcEEE-ECCCCCCCCCcccCCHHHHHH
Confidence 2 455544 4442111 11 245566654
No 476
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=63.35 E-value=5.7 Score=38.01 Aligned_cols=69 Identities=20% Similarity=0.396 Sum_probs=44.7
Q ss_pred HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEE
Q 018147 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (360)
Q Consensus 228 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI 307 (360)
+...+..++.+...+.+.++.+|.+....+.+.-.. | . ..++.+ |..++++|+++|++.|+++||-||
T Consensus 23 ~id~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~----g--a-----~~~~~~-~~~yT~~di~~lv~yA~~~gI~VI 90 (351)
T PF00728_consen 23 LIDQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEK----G--A-----YRPSDA-GGYYTKEDIRELVAYAKERGIEVI 90 (351)
T ss_dssp HHHHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHT----T--T-----ESTTCT-ESEBEHHHHHHHHHHHHHTT-EEE
T ss_pred HHHHHHHcCCcEEEEEEecCCCCccccCCCcccccc----C--c-----cccccc-cccCCHHHHHHHHHHHHHcCCcee
Confidence 445566678999998888777788766555443221 0 0 001113 449999999999999999998776
Q ss_pred E
Q 018147 308 A 308 (360)
Q Consensus 308 ~ 308 (360)
-
T Consensus 91 P 91 (351)
T PF00728_consen 91 P 91 (351)
T ss_dssp E
T ss_pred e
Confidence 5
No 477
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=63.17 E-value=15 Score=35.50 Aligned_cols=77 Identities=23% Similarity=0.405 Sum_probs=50.4
Q ss_pred HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecC-----CCCcccCCCHHHHHHHHHHHHHc
Q 018147 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP-----GNPTGQVLAEENQRAIVDFCKKE 302 (360)
Q Consensus 228 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P-----~NPTG~~~~~~~l~~i~~la~~~ 302 (360)
..+.+..++.+...+.+.++.+|.+..+.+.+.-+.. +. +..-. ..+| ..|.|..++++|+++|++.|+++
T Consensus 23 ~Id~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~g-a~--~~~~~-~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~r 98 (357)
T cd06563 23 FIDLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVG-AW--RGPTE-IGLPQGGGDGTPYGGFYTQEEIREIVAYAAER 98 (357)
T ss_pred HHHHHHHhccceEEEeeecCCCceecccCcchhhhcc-cc--cCccc-ccccccccCCCccCceECHHHHHHHHHHHHHc
Confidence 4556666789999998888878888776665532110 00 00000 0011 23457789999999999999999
Q ss_pred CCEEEE
Q 018147 303 GLVLLA 308 (360)
Q Consensus 303 ~i~lI~ 308 (360)
||-||-
T Consensus 99 gI~VIP 104 (357)
T cd06563 99 GITVIP 104 (357)
T ss_pred CCEEEE
Confidence 987764
No 478
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=63.14 E-value=1.1e+02 Score=27.01 Aligned_cols=83 Identities=13% Similarity=0.062 Sum_probs=45.3
Q ss_pred CEEEcCChHHHHH-HHHHHHccCCCCEEEEcCCCchHHH---HHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 192 DIFLTDGASPAVH-MMMQLLIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 192 ~I~~t~Ga~~al~-~~~~~l~~~~gd~Vlv~~P~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
.+++|.| +.++- .+...|.. .|..|++..-.-.... ..+...+.++..+.+|-. +.+.++++++...++
T Consensus 9 ~vlVtG~-sg~iG~~l~~~L~~-~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 81 (239)
T PRK07666 9 NALITGA-GRGIGRAVAIALAK-EGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVS-----DYEEVTAAIEQLKNE 81 (239)
T ss_pred EEEEEcC-CchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 4555554 44443 34455553 7778877653322222 223334556666666533 677888777765444
Q ss_pred CCCccEEEEecCCC
Q 018147 268 GITVRALVVINPGN 281 (360)
Q Consensus 268 g~~~k~iil~~P~N 281 (360)
..++.+++.+...+
T Consensus 82 ~~~id~vi~~ag~~ 95 (239)
T PRK07666 82 LGSIDILINNAGIS 95 (239)
T ss_pred cCCccEEEEcCccc
Confidence 44677777654433
No 479
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=63.07 E-value=1.1e+02 Score=27.19 Aligned_cols=78 Identities=15% Similarity=0.176 Sum_probs=41.2
Q ss_pred EEEcCChHHHH-HHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCc
Q 018147 193 IFLTDGASPAV-HMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (360)
Q Consensus 193 I~~t~Ga~~al-~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~ 271 (360)
|++| |++.++ ..+...|. ..|..|++.+-.-..........+.++..+.+|-. |.+.+++.++...+...++
T Consensus 3 vlIt-Gasg~iG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~i~~~~~~~~~~~~~i 75 (248)
T PRK10538 3 VLVT-GATAGFGECITRRFI-QQGHKVIATGRRQERLQELKDELGDNLYIAQLDVR-----NRAAIEEMLASLPAEWRNI 75 (248)
T ss_pred EEEE-CCCchHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhccceEEEEecCC-----CHHHHHHHHHHHHHHcCCC
Confidence 4555 444444 33444555 37888877654322333333334555666665533 5677777766544433356
Q ss_pred cEEEEe
Q 018147 272 RALVVI 277 (360)
Q Consensus 272 k~iil~ 277 (360)
..++.+
T Consensus 76 d~vi~~ 81 (248)
T PRK10538 76 DVLVNN 81 (248)
T ss_pred CEEEEC
Confidence 666544
No 480
>smart00642 Aamy Alpha-amylase domain.
Probab=62.62 E-value=45 Score=28.43 Aligned_cols=27 Identities=22% Similarity=0.395 Sum_probs=24.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCC
Q 018147 288 AEENQRAIVDFCKKEGLVLLADEVYQE 314 (360)
Q Consensus 288 ~~~~l~~i~~la~~~~i~lI~DeaY~~ 314 (360)
+.++++++++-|+++|+-||.|-+...
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~NH 94 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVINH 94 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 468999999999999999999988766
No 481
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=62.48 E-value=46 Score=23.55 Aligned_cols=61 Identities=16% Similarity=0.244 Sum_probs=37.2
Q ss_pred HHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCC-HHHHHHHHHHHHHcCCE
Q 018147 227 LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA-EENQRAIVDFCKKEGLV 305 (360)
Q Consensus 227 ~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~-~~~l~~i~~la~~~~i~ 305 (360)
.+...++..|.++..+.- ..+.+.. ....+++.+|.-. ++ .+++++|.+++++=|-+
T Consensus 9 a~~~~L~~~g~~v~~~~~--------~~~~l~~----------~~~tll~i~~~~~----~~~~~~~~~l~~~v~~G~~l 66 (70)
T PF14258_consen 9 ALYQLLEEQGVKVERWRK--------PYEALEA----------DDGTLLVIGPDLR----LSEPEEAEALLEWVEAGNTL 66 (70)
T ss_pred HHHHHHHHCCCeeEEecc--------cHHHhCC----------CCCEEEEEeCCCC----CCchHHHHHHHHHHHcCCEE
Confidence 344556667877765431 1333322 2335666666522 44 48899999999987878
Q ss_pred EEEc
Q 018147 306 LLAD 309 (360)
Q Consensus 306 lI~D 309 (360)
+|+|
T Consensus 67 vl~a 70 (70)
T PF14258_consen 67 VLAA 70 (70)
T ss_pred EEeC
Confidence 7765
No 482
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=62.41 E-value=1.4e+02 Score=27.99 Aligned_cols=79 Identities=14% Similarity=0.131 Sum_probs=42.1
Q ss_pred CEEEcCChHHHH-HHHHHHHccCCCCEEEEcCCCchHHHHHHHHc---CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 192 DIFLTDGASPAV-HMMMQLLIRSENDGILCPIPQYPLYSASIALH---GGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 192 ~I~~t~Ga~~al-~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
.+++|.|+ .+| ..+.+.|.. .|..|++..-.-.......+.. +.++..+.+|- -|.+.++++++...+.
T Consensus 8 ~vlVTGas-~gIG~~~a~~L~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 80 (322)
T PRK07453 8 TVIITGAS-SGVGLYAAKALAK-RGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDL-----GDLDSVRRFVDDFRAL 80 (322)
T ss_pred EEEEEcCC-ChHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecC-----CCHHHHHHHHHHHHHh
Confidence 45555544 444 445556664 7888887754433333333322 33455555543 2677787777664444
Q ss_pred CCCccEEEEe
Q 018147 268 GITVRALVVI 277 (360)
Q Consensus 268 g~~~k~iil~ 277 (360)
+.++.+||.+
T Consensus 81 ~~~iD~li~n 90 (322)
T PRK07453 81 GKPLDALVCN 90 (322)
T ss_pred CCCccEEEEC
Confidence 4456655533
No 483
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=62.40 E-value=1.3e+02 Score=27.92 Aligned_cols=97 Identities=14% Similarity=0.059 Sum_probs=50.9
Q ss_pred CCEEEcCChHHHH-HHHHHHHccCCCCEEEEcCCCch-H---HHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHH
Q 018147 191 NDIFLTDGASPAV-HMMMQLLIRSENDGILCPIPQYP-L---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (360)
Q Consensus 191 ~~I~~t~Ga~~al-~~~~~~l~~~~gd~Vlv~~P~y~-~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 265 (360)
..+++|.|+ .+| ..+...|.. .|..|++.+.... . ....++..|.++..+.+|-. |.+.+++.++...
T Consensus 13 k~~lVTGas-~gIG~~ia~~L~~-~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~-----d~~~~~~~~~~~~ 85 (306)
T PRK07792 13 KVAVVTGAA-AGLGRAEALGLAR-LGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDIS-----QRATADELVATAV 85 (306)
T ss_pred CEEEEECCC-ChHHHHHHHHHHH-CCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCC-----CHHHHHHHHHHHH
Confidence 345555544 444 344455664 7888887654322 1 22233445777777776643 6777777776644
Q ss_pred hcCCCccEEEEecCCCC-cc--cCCCHHHHHHHH
Q 018147 266 AKGITVRALVVINPGNP-TG--QVLAEENQRAIV 296 (360)
Q Consensus 266 ~~g~~~k~iil~~P~NP-TG--~~~~~~~l~~i~ 296 (360)
+ ..++..++ +|.... .+ .-.+.+++++..
T Consensus 86 ~-~g~iD~li-~nAG~~~~~~~~~~~~~~~~~~~ 117 (306)
T PRK07792 86 G-LGGLDIVV-NNAGITRDRMLFNMSDEEWDAVI 117 (306)
T ss_pred H-hCCCCEEE-ECCCCCCCCCcccCCHHHHHHHH
Confidence 4 23566555 433221 11 124556665543
No 484
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=62.37 E-value=71 Score=28.76 Aligned_cols=79 Identities=14% Similarity=0.135 Sum_probs=41.5
Q ss_pred CCEEEcCChHHHH-HHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCC
Q 018147 191 NDIFLTDGASPAV-HMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (360)
Q Consensus 191 ~~I~~t~Ga~~al-~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~ 269 (360)
..+++|.| +.+| ..+.+.|. ..|.+|++.+-.-..........+.++..+.+|-. |.+.+.++++...++..
T Consensus 6 k~vlItGa-s~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g 78 (262)
T TIGR03325 6 EVVLVTGG-ASGLGRAIVDRFV-AEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVR-----SLDDHKEAVARCVAAFG 78 (262)
T ss_pred cEEEEECC-CChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccC-----CHHHHHHHHHHHHHHhC
Confidence 34555554 4444 34455666 48989888754433333333334555655655532 56666666655433333
Q ss_pred CccEEEE
Q 018147 270 TVRALVV 276 (360)
Q Consensus 270 ~~k~iil 276 (360)
++..++.
T Consensus 79 ~id~li~ 85 (262)
T TIGR03325 79 KIDCLIP 85 (262)
T ss_pred CCCEEEE
Confidence 5555543
No 485
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=62.26 E-value=1.1e+02 Score=26.98 Aligned_cols=79 Identities=14% Similarity=0.122 Sum_probs=44.8
Q ss_pred CEEEcCChHHHH-HHHHHHHccCCCCEEEEcCC-CchHH---HHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHh
Q 018147 192 DIFLTDGASPAV-HMMMQLLIRSENDGILCPIP-QYPLY---SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (360)
Q Consensus 192 ~I~~t~Ga~~al-~~~~~~l~~~~gd~Vlv~~P-~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 266 (360)
.+++|.| +.+| ..+...|.. .|..|++..- .-... ...+...+.++..+++|-. |.+.+.+++++..+
T Consensus 8 ~~lItG~-s~~iG~~la~~l~~-~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 80 (247)
T PRK12935 8 VAIVTGG-AKGIGKAITVALAQ-EGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVS-----KVEDANRLVEEAVN 80 (247)
T ss_pred EEEEECC-CCHHHHHHHHHHHH-cCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCC-----CHHHHHHHHHHHHH
Confidence 4555554 4444 445555664 7888876422 11222 2223344667777777643 67788888777655
Q ss_pred cCCCccEEEEe
Q 018147 267 KGITVRALVVI 277 (360)
Q Consensus 267 ~g~~~k~iil~ 277 (360)
+..++..|+.+
T Consensus 81 ~~~~id~vi~~ 91 (247)
T PRK12935 81 HFGKVDILVNN 91 (247)
T ss_pred HcCCCCEEEEC
Confidence 44467777755
No 486
>PRK09242 tropinone reductase; Provisional
Probab=62.25 E-value=1.2e+02 Score=27.15 Aligned_cols=98 Identities=12% Similarity=0.085 Sum_probs=50.2
Q ss_pred CCEEEcCChHHHH-HHHHHHHccCCCCEEEEcCCCchHHHHHHH---Hc--CCeEEEeecCCCCCcCCCHHHHHHHHHHH
Q 018147 191 NDIFLTDGASPAV-HMMMQLLIRSENDGILCPIPQYPLYSASIA---LH--GGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (360)
Q Consensus 191 ~~I~~t~Ga~~al-~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~---~~--g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 264 (360)
..+++|.| +.+| ..+...|. ..|.+|++..-.-........ .. +.++..+.+|-. +.+.++++++..
T Consensus 10 k~~lItGa-~~gIG~~~a~~l~-~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~ 82 (257)
T PRK09242 10 QTALITGA-SKGIGLAIAREFL-GLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVS-----DDEDRRAILDWV 82 (257)
T ss_pred CEEEEeCC-CchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCC-----CHHHHHHHHHHH
Confidence 34555544 4444 33444555 478888877644333222222 22 556776666533 567777777665
Q ss_pred HhcCCCccEEEEecCCCCcc--cCCCHHHHHHH
Q 018147 265 KAKGITVRALVVINPGNPTG--QVLAEENQRAI 295 (360)
Q Consensus 265 ~~~g~~~k~iil~~P~NPTG--~~~~~~~l~~i 295 (360)
.++..++..|+.+...+..+ ..++.+++++.
T Consensus 83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~ 115 (257)
T PRK09242 83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGI 115 (257)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH
Confidence 44434566666443222111 23455555543
No 487
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=62.01 E-value=71 Score=28.76 Aligned_cols=80 Identities=9% Similarity=0.049 Sum_probs=43.0
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCC
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~ 270 (360)
..+++|.|+..-=..+...|. ..|..|++..-.-.......+..+.++..+.+|-. |.+.++++++...++..+
T Consensus 7 k~vlVtGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g~ 80 (263)
T PRK06200 7 QVALITGGGSGIGRALVERFL-AEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVT-----SYADNQRAVDQTVDAFGK 80 (263)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCC-----CHHHHHHHHHHHHHhcCC
Confidence 345555544333344555566 47888887664433334444444545555555532 567777777665444335
Q ss_pred ccEEEE
Q 018147 271 VRALVV 276 (360)
Q Consensus 271 ~k~iil 276 (360)
+..++-
T Consensus 81 id~li~ 86 (263)
T PRK06200 81 LDCFVG 86 (263)
T ss_pred CCEEEE
Confidence 655543
No 488
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=61.95 E-value=41 Score=29.13 Aligned_cols=76 Identities=24% Similarity=0.145 Sum_probs=49.4
Q ss_pred EEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccE
Q 018147 194 FLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRA 273 (360)
Q Consensus 194 ~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~ 273 (360)
++|.|++..=......|.. .|..|++.+---..-...++..|.++++.|.+-. .-+++..++...+.+-.+..+
T Consensus 13 lvtggasglg~ataerlak-qgasv~lldlp~skg~~vakelg~~~vf~padvt-----sekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 13 LVTGGASGLGKATAERLAK-QGASVALLDLPQSKGADVAKELGGKVVFTPADVT-----SEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred EeecCcccccHHHHHHHHh-cCceEEEEeCCcccchHHHHHhCCceEEeccccC-----cHHHHHHHHHHHHhhccceee
Confidence 5566666555555666664 7877777663334445677889999999987633 456777777776655445554
Q ss_pred EE
Q 018147 274 LV 275 (360)
Q Consensus 274 ii 275 (360)
.+
T Consensus 87 ~v 88 (260)
T KOG1199|consen 87 LV 88 (260)
T ss_pred ee
Confidence 44
No 489
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=61.77 E-value=1.5e+02 Score=28.20 Aligned_cols=64 Identities=17% Similarity=0.230 Sum_probs=43.8
Q ss_pred CcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 018147 249 GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (360)
Q Consensus 249 ~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI~DeaY~~~ 315 (360)
+..++.+++++.++...+.-.+..+|+++ -+=|-| ++.+...+|+++|++.|+.+++|..-..+
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~Vvls-GSlP~g--~~~d~y~~li~~~~~~g~~vilD~Sg~~L 171 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVLS-GSLPPG--VPPDAYAELIRILRQQGAKVILDTSGEAL 171 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEEe-CCCCCC--CCHHHHHHHHHHHHhcCCeEEEECChHHH
Confidence 45677788877776544322234444443 444544 46789999999999999999999766553
No 490
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=61.71 E-value=1.2e+02 Score=27.09 Aligned_cols=79 Identities=16% Similarity=0.090 Sum_probs=39.1
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCC
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~ 270 (360)
..+++|.|+...=..+.+.|.. .|..|++..-.-..-...+...+. ..+++|- -|.+.++++++...++..+
T Consensus 8 k~~lItGas~gIG~~~a~~l~~-~G~~v~~~~~~~~~~~~~l~~~~~--~~~~~Dl-----~~~~~~~~~~~~~~~~~~~ 79 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFLR-EGAKVAVLYNSAENEAKELREKGV--FTIKCDV-----GNRDQVKKSKEVVEKEFGR 79 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHhCCC--eEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 3455555543333445556664 787877653221222222232343 3444442 2567777777665444335
Q ss_pred ccEEEEe
Q 018147 271 VRALVVI 277 (360)
Q Consensus 271 ~k~iil~ 277 (360)
+..++.+
T Consensus 80 id~li~~ 86 (255)
T PRK06463 80 VDVLVNN 86 (255)
T ss_pred CCEEEEC
Confidence 6666544
No 491
>PLN02955 8-amino-7-oxononanoate synthase
Probab=61.10 E-value=1.9e+02 Score=29.26 Aligned_cols=137 Identities=10% Similarity=0.127 Sum_probs=75.5
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHhhcCCCCCCCCEEEcCCh-HHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHc---
Q 018147 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGA-SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH--- 235 (360)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~I~~t~Ga-~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~--- 235 (360)
...|......+++++++.+.+. +||........+..... .+-++..+..+.. ..+ .++..-.|.....++...
T Consensus 109 SndYLGL~~~p~v~~a~~~ai~-~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g-~e~-all~sSGy~AN~~~i~aL~~~ 185 (476)
T PLN02955 109 GNDYLGLSSHPTISNAAANAAK-EYGMGPKGSALICGYTTYHRLLESSLADLKK-KED-CLVCPTGFAANMAAMVAIGSV 185 (476)
T ss_pred ccCccCCCCCHHHHHHHHHHHH-HcCCCCCCcCccccChHHHHHHHHHHHHHHC-CCc-EEEECChHHHHHHHHHHHhhc
Confidence 5568777778999999999885 47766555555544433 3446777777763 444 455555666554444433
Q ss_pred ------------CCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcC
Q 018147 236 ------------GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (360)
Q Consensus 236 ------------g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~ 303 (360)
+-.. .+-.|+. .=..+...++-.+. +..+-+...+||- .++++++++-+.+..
T Consensus 186 ~~~~~~~~~~~~~~~d-~i~~D~~-----~HaSI~dG~~ls~~---~~~a~~~~f~HND------~~~Le~~L~~~~~~~ 250 (476)
T PLN02955 186 ASLLAASGKPLKNEKV-AIFSDAL-----NHASIIDGVRLAER---QGNVEVFVYRHCD------MYHLNSLLSSCKMKR 250 (476)
T ss_pred cccccccccccCCCCc-EEEEecc-----chHHHHHHHHhccc---cCCceEEEeCCCC------HHHHHHHHHhCCCCc
Confidence 1111 1112221 11223333321100 1123334456663 466777776665556
Q ss_pred CEEEEccCCCC
Q 018147 304 LVLLADEVYQE 314 (360)
Q Consensus 304 i~lI~DeaY~~ 314 (360)
.+||+|.+|..
T Consensus 251 ~~Vv~EgV~Sm 261 (476)
T PLN02955 251 KVVVTDSLFSM 261 (476)
T ss_pred eEEEEeCCCCC
Confidence 89999999876
No 492
>PRK06197 short chain dehydrogenase; Provisional
Probab=60.92 E-value=88 Score=29.03 Aligned_cols=79 Identities=15% Similarity=0.120 Sum_probs=41.4
Q ss_pred CEEEcCChHHHHH-HHHHHHccCCCCEEEEcCCCchHHHHHH---HH-c-CCeEEEeecCCCCCcCCCHHHHHHHHHHHH
Q 018147 192 DIFLTDGASPAVH-MMMQLLIRSENDGILCPIPQYPLYSASI---AL-H-GGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (360)
Q Consensus 192 ~I~~t~Ga~~al~-~~~~~l~~~~gd~Vlv~~P~y~~~~~~~---~~-~-g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 265 (360)
.|++| |++.+|- .+.+.|.. .|.+|++....-....... .. . +.++..+.+|- -|.+.+++++++..
T Consensus 18 ~vlIt-Gas~gIG~~~a~~l~~-~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-----~d~~~v~~~~~~~~ 90 (306)
T PRK06197 18 VAVVT-GANTGLGYETAAALAA-KGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDL-----TSLASVRAAADALR 90 (306)
T ss_pred EEEEc-CCCCcHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCC-----CCHHHHHHHHHHHH
Confidence 35555 4445554 34445653 7878776654433222221 11 1 34555555553 36777777776654
Q ss_pred hcCCCccEEEEe
Q 018147 266 AKGITVRALVVI 277 (360)
Q Consensus 266 ~~g~~~k~iil~ 277 (360)
++..++.+++.+
T Consensus 91 ~~~~~iD~li~n 102 (306)
T PRK06197 91 AAYPRIDLLINN 102 (306)
T ss_pred hhCCCCCEEEEC
Confidence 444456666654
No 493
>PRK07035 short chain dehydrogenase; Provisional
Probab=60.67 E-value=1.2e+02 Score=26.88 Aligned_cols=81 Identities=11% Similarity=0.097 Sum_probs=44.8
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHH---HHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI---ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
..+++|.|+...=..+.+.|.. .|..|++..-.-....... ...+.++..+.++-. |.+.++++++...+.
T Consensus 9 k~vlItGas~gIG~~l~~~l~~-~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 82 (252)
T PRK07035 9 KIALVTGASRGIGEAIAKLLAQ-QGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIG-----EMEQIDALFAHIRER 82 (252)
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 4466665554444555566664 7888887765433333222 233555666665533 567777776655443
Q ss_pred CCCccEEEEe
Q 018147 268 GITVRALVVI 277 (360)
Q Consensus 268 g~~~k~iil~ 277 (360)
..++..++.+
T Consensus 83 ~~~id~li~~ 92 (252)
T PRK07035 83 HGRLDILVNN 92 (252)
T ss_pred cCCCCEEEEC
Confidence 3356655544
No 494
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=60.44 E-value=28 Score=31.92 Aligned_cols=95 Identities=12% Similarity=0.280 Sum_probs=55.6
Q ss_pred CEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHHHHHcCCeEEEeecCCCCCcCC-CHHHHHHHHHHHHhcCCC
Q 018147 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGL-ETSEVKKQLEAAKAKGIT 270 (360)
Q Consensus 192 ~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-d~~~L~~~i~~~~~~g~~ 270 (360)
+|++-.|.+++-.++-... +.|. |+++.-+ .|...+..-......+.. . ++ |.++|++.|+++ +
T Consensus 2 ~ILvlgGTtE~r~la~~L~--~~g~-v~~sv~t--~~g~~~~~~~~~~~~v~~--G---~lg~~~~l~~~l~~~-----~ 66 (249)
T PF02571_consen 2 KILVLGGTTEGRKLAERLA--EAGY-VIVSVAT--SYGGELLKPELPGLEVRV--G---RLGDEEGLAEFLREN-----G 66 (249)
T ss_pred EEEEEechHHHHHHHHHHH--hcCC-EEEEEEh--hhhHhhhccccCCceEEE--C---CCCCHHHHHHHHHhC-----C
Confidence 5889999999987765544 3666 5555422 232222211111112222 1 56 899999999874 6
Q ss_pred ccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEEE
Q 018147 271 VRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (360)
Q Consensus 271 ~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~lI 307 (360)
+++|+ .-..|--..++ +.+.+.|++.|+.++
T Consensus 67 i~~vI--DATHPfA~~is----~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 67 IDAVI--DATHPFAAEIS----QNAIEACRELGIPYL 97 (249)
T ss_pred CcEEE--ECCCchHHHHH----HHHHHHHhhcCcceE
Confidence 66555 44445444444 667778999887654
No 495
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=60.20 E-value=9.6 Score=36.33 Aligned_cols=60 Identities=17% Similarity=0.283 Sum_probs=39.0
Q ss_pred cCCCHHHHHHHHHHHHhcCCCccEEEEe-cCCCCcccCCCHH---HHHHHHHHHHHcCCEEEEc
Q 018147 250 WGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEE---NQRAIVDFCKKEGLVLLAD 309 (360)
Q Consensus 250 ~~~d~~~L~~~i~~~~~~g~~~k~iil~-~P~NPTG~~~~~~---~l~~i~~la~~~~i~lI~D 309 (360)
|.+..+..++.+++.++.|.++-.+++- |-|.|.--.++-+ ++.+++++|+++|++||+-
T Consensus 19 ~r~p~~~W~~~l~k~ka~G~n~v~~yv~W~~he~~~g~~df~g~~dl~~f~~~a~~~gl~vilr 82 (319)
T PF01301_consen 19 FRIPPEYWRDRLQKMKAAGLNTVSTYVPWNLHEPEEGQFDFTGNRDLDRFLDLAQENGLYVILR 82 (319)
T ss_dssp GGS-GGGHHHHHHHHHHTT-SEEEEE--HHHHSSBTTB---SGGG-HHHHHHHHHHTT-EEEEE
T ss_pred ccCChhHHHHHHHHHHhCCcceEEEeccccccCCCCCcccccchhhHHHHHHHHHHcCcEEEec
Confidence 4555677777777777777777666665 5577665556554 7999999999999999886
No 496
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=60.00 E-value=1.3e+02 Score=26.91 Aligned_cols=82 Identities=17% Similarity=0.022 Sum_probs=44.5
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCch-HHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCC
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP-LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~ 269 (360)
..+++|.|+..-=..+.+.|. ..|..|+..+..-. .....++..+.++..+.+|-. |.+.+++.+++..++..
T Consensus 11 k~~lItG~~~gIG~a~a~~l~-~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~~ 84 (253)
T PRK08993 11 KVAVVTGCDTGLGQGMALGLA-EAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLR-----KIDGIPALLERAVAEFG 84 (253)
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCC-----CHHHHHHHHHHHHHHhC
Confidence 345555554433344555566 47888876543211 122233344666666666533 67788877776554444
Q ss_pred CccEEEEecC
Q 018147 270 TVRALVVINP 279 (360)
Q Consensus 270 ~~k~iil~~P 279 (360)
++.+++ ++.
T Consensus 85 ~~D~li-~~A 93 (253)
T PRK08993 85 HIDILV-NNA 93 (253)
T ss_pred CCCEEE-ECC
Confidence 566544 444
No 497
>PRK07890 short chain dehydrogenase; Provisional
Probab=59.97 E-value=1.3e+02 Score=26.82 Aligned_cols=81 Identities=10% Similarity=-0.016 Sum_probs=43.6
Q ss_pred CCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHH---HHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhc
Q 018147 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 267 (360)
..+++|.|+..-=..+...|. ..|..|++.+-.-...... +...+.++..+.+|-. |.+.++++++...++
T Consensus 6 k~vlItGa~~~IG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 79 (258)
T PRK07890 6 KVVVVSGVGPGLGRTLAVRAA-RAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDIT-----DEDQCANLVALALER 79 (258)
T ss_pred CEEEEECCCCcHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCC-----CHHHHHHHHHHHHHH
Confidence 345555554433344455566 4888888776443332222 2223555666665532 577777777665444
Q ss_pred CCCccEEEEe
Q 018147 268 GITVRALVVI 277 (360)
Q Consensus 268 g~~~k~iil~ 277 (360)
..++.+++.+
T Consensus 80 ~g~~d~vi~~ 89 (258)
T PRK07890 80 FGRVDALVNN 89 (258)
T ss_pred cCCccEEEEC
Confidence 3356666544
No 498
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=59.82 E-value=85 Score=30.98 Aligned_cols=97 Identities=11% Similarity=0.164 Sum_probs=57.4
Q ss_pred CCEEEcCChHHHHHHHHHHHcc--------CCCCEEEEcCCCchHHH-----H----HHHHcCCeEEE-eecCCCCCcCC
Q 018147 191 NDIFLTDGASPAVHMMMQLLIR--------SENDGILCPIPQYPLYS-----A----SIALHGGTLVP-YYLDEATGWGL 252 (360)
Q Consensus 191 ~~I~~t~Ga~~al~~~~~~l~~--------~~gd~Vlv~~P~y~~~~-----~----~~~~~g~~~~~-v~~~~~~~~~~ 252 (360)
+-|++++|+++.....+..+.. .+||.|++..+.++++. . .+...|+++.. +.... .-
T Consensus 287 ~~vii~tg~~g~~~~~l~~~~~~~~~~i~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~Sg----Ha 362 (422)
T TIGR00649 287 NYLIITTGSQGEPYAALTRIANNEHEQIRIRKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVSG----HA 362 (422)
T ss_pred cEEEEEeCCCCcHHHHHHHHhCCCCCcEEeCCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEecC----CC
Confidence 3466666665444333333332 16799999987777655 1 23346777643 22221 34
Q ss_pred CHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCC
Q 018147 253 ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGL 304 (360)
Q Consensus 253 d~~~L~~~i~~~~~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i 304 (360)
+.++|+..++.. +++.++..|-- ...+...++++++.|+
T Consensus 363 ~~~dl~~~i~~~-----~Pk~~ipvHge--------~~~~~~~~~~a~~~g~ 401 (422)
T TIGR00649 363 SQEDHKLLLRLL-----KPKYIIPVHGE--------YRMLINHTKLAEEEGY 401 (422)
T ss_pred CHHHHHHHHHHh-----CCCEEEecCCc--------HHHHHHHHHHHHHcCC
Confidence 678888887764 68877755422 2357777778877664
No 499
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=59.67 E-value=1e+02 Score=27.39 Aligned_cols=102 Identities=13% Similarity=0.272 Sum_probs=60.9
Q ss_pred CCCCCCEEEcCChHHHHHHHHHHHccCCCCEEEEcCCCc-hHHHHHHHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHH
Q 018147 187 PADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (360)
Q Consensus 187 ~~~~~~I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 265 (360)
+++-..|++..||..|..-+= .|+ +.|..|.+..|.. +.....++..+...+. + ..+.+.+.
T Consensus 9 ~l~~k~VlvvGgG~va~rKa~-~ll-~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~-----~---~~~~~~~~------- 71 (210)
T COG1648 9 DLEGKKVLVVGGGSVALRKAR-LLL-KAGADVTVVSPEFEPELKALIEEGKIKWIE-----R---EFDAEDLD------- 71 (210)
T ss_pred EcCCCEEEEECCCHHHHHHHH-HHH-hcCCEEEEEcCCccHHHHHHHHhcCcchhh-----c---ccChhhhc-------
Confidence 345567999999999998764 455 4899999999998 4445554544422221 1 23444332
Q ss_pred hcCCCccEEEEecCCCCcccCCCHHHHHHHHHHHHHcCCEE-EEccC-CCCCcc
Q 018147 266 AKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL-LADEV-YQENVY 317 (360)
Q Consensus 266 ~~g~~~k~iil~~P~NPTG~~~~~~~l~~i~~la~~~~i~l-I~Dea-Y~~~~~ 317 (360)
..-++++. -+| .+.=++|.+.|+++++++ ++|+. +.+|++
T Consensus 72 ----~~~lviaA-t~d-------~~ln~~i~~~a~~~~i~vNv~D~p~~~~f~~ 113 (210)
T COG1648 72 ----DAFLVIAA-TDD-------EELNERIAKAARERRILVNVVDDPELCDFIF 113 (210)
T ss_pred ----CceEEEEe-CCC-------HHHHHHHHHHHHHhCCceeccCCcccCceec
Confidence 22233333 232 344688999999998755 44443 345444
No 500
>PRK05650 short chain dehydrogenase; Provisional
Probab=59.25 E-value=1.4e+02 Score=27.00 Aligned_cols=79 Identities=15% Similarity=0.005 Sum_probs=42.8
Q ss_pred EEEcCChHHHHHHHHHHHccCCCCEEEEcCCCchHHHHH---HHHcCCeEEEeecCCCCCcCCCHHHHHHHHHHHHhcCC
Q 018147 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (360)
Q Consensus 193 I~~t~Ga~~al~~~~~~l~~~~gd~Vlv~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~ 269 (360)
+++|.|+...=..+...|.+ .|..|++....-...... ++..|.++..+.+|- .|.+.+++.++...++..
T Consensus 3 vlVtGasggIG~~la~~l~~-~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~i~~~~~ 76 (270)
T PRK05650 3 VMITGAASGLGRAIALRWAR-EGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDV-----RDYSQLTALAQACEEKWG 76 (270)
T ss_pred EEEecCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccC-----CCHHHHHHHHHHHHHHcC
Confidence 55555544333445556664 788888766443332222 333455666666653 256677776665433333
Q ss_pred CccEEEEe
Q 018147 270 TVRALVVI 277 (360)
Q Consensus 270 ~~k~iil~ 277 (360)
++..+|.+
T Consensus 77 ~id~lI~~ 84 (270)
T PRK05650 77 GIDVIVNN 84 (270)
T ss_pred CCCEEEEC
Confidence 56666654
Done!