SDN3 protein (Arabidopsis thaliana)

STRING 9.05

SDN3 protein (Arabidopsis thaliana) - STRING network view

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Your Input:
	SDN3	SDN3 (SMALL RNA DEGRADING NUCLEASE 3); exonuclease/ nucleic acid binding; SMALL RNA DEGRADING NUCLEASE 3 (SDN3); FUNCTIONS IN- exonuclease activity, nucleic acid binding; LOCATED IN- intracellular; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- RNA recognition motif, RNP-1 (InterPro-IPR000504), Exonuclease (InterPro-IPR006055), Polynucleotidyl transferase, Ribonuclease H fold (InterPro-IPR012337), Exonuclease, RNase T and DNA polymerase III (InterPro-IPR013520); BEST Arabidopsis thaliana protein match is- SDN1 (SMALL RNA DEGRADING NUC [...] (782 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT3G21350	RNA polymerase transcriptional regulation mediator-related; RNA polymerase transcriptional regu [...] (298 aa)		•	•	0.960
	AT1G44910	protein binding; protein binding; FUNCTIONS IN- protein binding; INVOLVED IN- biological_proces [...] (958 aa)	•		•	0.951
	FIB2	FIB2 (FIBRILLARIN 2); snoRNA binding; encodes a fibrillarin, a key nucleolar protein in eukaryo [...] (320 aa)	•		•	0.930
	AT3G10690	DNA gyrase subunit A family protein; DNA gyrase subunit A family protein; FUNCTIONS IN- DNA top [...] (950 aa)	•		•	0.907
	BIP2	BIP2; ATP binding; luminal binding protein (BiP) ; Probably plays a role in facilitating the as [...] (668 aa)			•	0.899
	AT5G41910	RNA polymerase II mediator complex protein-related; RNA polymerase II mediator complex protein- [...] (186 aa)			•	0.899
	BIP1	BIP1; ATP binding; Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 [...] (669 aa)			•	0.899
	AT5G19910	SOH1 family protein; SOH1 family protein; FUNCTIONS IN- RNA polymerase II transcription mediato [...] (196 aa)			•	0.899
	AT5G03500	transcription coactivator; transcription coactivator; FUNCTIONS IN- transcription coactivator a [...] (168 aa)			•	0.899
	AT5G03220	transcriptional co-activator-related; transcriptional co-activator-related; FUNCTIONS IN- trans [...] (168 aa)			•	0.899

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Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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