Your job contains 1 sequence.
>018156
MLFSQLVYRIAARTPRNSLPSCRWILSHRRYGHQPTFRNSNENKKHLDPFSLVGDELSLI
SMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNVCTPELSPNVLGNTL
ILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISR
ALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGL
AYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVD
VILEYLGKSHGIQRTTELALKHASLAAAAIDSLPETHDVDATNARTALVHITQKIITRNK
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018156
(360 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2062315 - symbol:GPS1 "geranyl diphosphate syn... 558 2.3e-56 2
CGD|CAL0005672 - symbol:orf19.7478 species:5476 "Candida ... 297 2.2e-52 3
UNIPROTKB|F6RJN8 - symbol:PDSS1 "Uncharacterized protein"... 325 3.7e-52 2
UNIPROTKB|Q5T2R2 - symbol:PDSS1 "Decaprenyl-diphosphate s... 311 4.8e-52 2
UNIPROTKB|F1RTW8 - symbol:PDSS1 "Uncharacterized protein"... 312 9.9e-52 2
UNIPROTKB|F1PV51 - symbol:PDSS1 "Uncharacterized protein"... 311 1.6e-51 2
ASPGD|ASPL0000038406 - symbol:AN10340 species:162425 "Eme... 275 2.0e-50 3
FB|FBgn0051005 - symbol:qless "qless" species:7227 "Droso... 292 2.9e-45 2
POMBASE|SPBPJ4664.01 - symbol:dps1 "decaprenyl diphosphat... 267 3.3e-45 2
WB|WBGene00000761 - symbol:coq-1 species:6239 "Caenorhabd... 256 2.5e-42 2
SGD|S000000207 - symbol:COQ1 "Hexaprenyl pyrophosphate sy... 305 3.2e-34 2
MGI|MGI:1889278 - symbol:Pdss1 "prenyl (solanesyl) diphos... 321 7.1e-29 1
DICTYBASE|DDB_G0280293 - symbol:coq1 "trans-prenyltransfe... 320 9.1e-29 1
ZFIN|ZDB-GENE-030131-4430 - symbol:pdss1 "prenyl (decapre... 317 1.9e-28 1
TAIR|locus:2020362 - symbol:SPS2 "solanesyl diphosphate s... 312 6.4e-28 1
UNIPROTKB|E1BZW8 - symbol:PDSS1 "Uncharacterized protein"... 311 8.2e-28 1
TAIR|locus:2202940 - symbol:SPS1 "solanesyl diphosphate s... 290 1.4e-25 1
UNIPROTKB|P31114 - symbol:hepT "Heptaprenyl diphosphate s... 190 2.9e-22 2
TIGR_CMR|BA_1535 - symbol:BA_1535 "heptaprenyl diphosphat... 186 7.7e-22 2
UNIPROTKB|H0YEE6 - symbol:PDSS1 "Decaprenyl-diphosphate s... 236 7.2e-20 1
UNIPROTKB|F1NMS4 - symbol:PDSS2 "Uncharacterized protein"... 202 7.2e-20 2
RGD|1359372 - symbol:Pdss2 "prenyl (decaprenyl) diphospha... 184 1.1e-17 2
UNIPROTKB|Q5U2R1 - symbol:Pdss2 "Decaprenyl-diphosphate s... 184 1.1e-17 2
UNIPROTKB|Q3IPL1 - symbol:idsA3 "Geranylfarnesyl diphosph... 141 5.6e-17 2
UNIPROTKB|Q86YH6 - symbol:PDSS2 "Decaprenyl-diphosphate s... 178 9.6e-17 2
TIGR_CMR|CBU_0382 - symbol:CBU_0382 "octylprenyl diphosph... 137 1.5e-16 2
UNIPROTKB|I3LJ49 - symbol:I3LJ49 "Uncharacterized protein... 205 2.9e-16 1
UNIPROTKB|J9NVK1 - symbol:PDSS2 "Uncharacterized protein"... 175 5.9e-16 2
UNIPROTKB|Q3AAM7 - symbol:CHY_1988 "Geranyltranstransfera... 154 1.1e-15 2
TIGR_CMR|CHY_1988 - symbol:CHY_1988 "geranyltranstransfer... 154 1.1e-15 2
UNIPROTKB|A6QR05 - symbol:PDSS2 "PDSS2 protein" species:9... 165 1.3e-15 2
TIGR_CMR|NSE_0238 - symbol:NSE_0238 "polyprenyl synthetas... 137 1.8e-15 2
FB|FBgn0037044 - symbol:CG10585 species:7227 "Drosophila ... 144 3.3e-15 2
MGI|MGI:1918615 - symbol:Pdss2 "prenyl (solanesyl) diphos... 167 7.0e-15 2
UNIPROTKB|Q81M53 - symbol:ispA "Geranyltranstransferase" ... 130 3.5e-14 2
TIGR_CMR|BA_4402 - symbol:BA_4402 "geranyltranstransferas... 130 3.5e-14 2
UNIPROTKB|P55785 - symbol:hepT "Heptaprenyl diphosphate s... 198 9.3e-14 1
GENEDB_PFALCIPARUM|PFB0130w - symbol:PFB0130w "polyprenyl... 200 3.0e-13 2
UNIPROTKB|O96130 - symbol:OPP "Octaprenyl pyrophosphate s... 200 3.0e-13 2
UNIPROTKB|Q9UWR6 - symbol:fgs "Geranylfarnesyl diphosphat... 119 1.2e-12 2
TIGR_CMR|DET_0389 - symbol:DET_0389 "heptaprenyl diphosph... 189 1.3e-12 1
UNIPROTKB|I3LGK0 - symbol:PDSS2 "Uncharacterized protein"... 132 2.3e-12 2
TIGR_CMR|GSU_1317 - symbol:GSU_1317 "octaprenyl-diphospha... 185 3.8e-12 1
UNIPROTKB|Q3ACT5 - symbol:hepT "Heptaprenyl diphosphate s... 184 5.2e-12 1
TIGR_CMR|CHY_1206 - symbol:CHY_1206 "heptaprenyl diphosph... 184 5.2e-12 1
TIGR_CMR|CJE_0645 - symbol:CJE_0645 "polyprenyl synthetas... 182 5.8e-12 1
ZFIN|ZDB-GENE-040718-43 - symbol:pdss2 "prenyl (decapreny... 184 8.3e-12 1
UNIPROTKB|B4DKU5 - symbol:PDSS2 "Decaprenyl-diphosphate s... 178 1.8e-11 1
UNIPROTKB|Q9KUT1 - symbol:VC_0434 "Octaprenyl-diphosphate... 180 2.0e-11 1
TIGR_CMR|VC_0434 - symbol:VC_0434 "octaprenyl-diphosphate... 180 2.0e-11 1
UNIPROTKB|Q8PYS1 - symbol:MM_0789 "Geranylfarnesyl diphos... 115 2.9e-11 2
UNIPROTKB|O66129 - symbol:hexs-b "Hexaprenyl-diphosphate ... 169 3.6e-11 2
UNIPROTKB|P0AD57 - symbol:ispB "IspB" species:83333 "Esch... 175 5.9e-11 1
UNIPROTKB|O50410 - symbol:idsB "Geranylgeranyl diphosphat... 116 6.8e-11 2
TIGR_CMR|SO_3653 - symbol:SO_3653 "octaprenyl-diphosphate... 174 8.6e-11 1
UNIPROTKB|O06428 - symbol:grcC1 "Heptaprenyl diphosphate ... 168 4.5e-10 1
TIGR_CMR|CPS_4513 - symbol:CPS_4513 "octaprenyl-diphospha... 166 7.0e-10 1
TIGR_CMR|ECH_0088 - symbol:ECH_0088 "octaprenyl-diphospha... 164 1.2e-09 1
UNIPROTKB|Q0C153 - symbol:ispA "Geranyltranstransferase" ... 104 1.9e-09 2
UNIPROTKB|Q5LX97 - symbol:ddsA "Decaprenyl diphosphate sy... 159 4.8e-09 1
TIGR_CMR|SPO_0319 - symbol:SPO_0319 "decaprenyl diphospha... 159 4.8e-09 1
TIGR_CMR|APH_1247 - symbol:APH_1247 "octaprenyl-diphospha... 155 1.2e-08 1
TIGR_CMR|CJE_1816 - symbol:CJE_1816 "geranyltranstransfer... 109 1.8e-08 2
UNIPROTKB|Q74CA9 - symbol:GSU1765 "Trans-isoprenyl diphos... 148 6.5e-08 1
TIGR_CMR|GSU_1765 - symbol:GSU_1765 "geranyltranstransfer... 148 6.5e-08 1
ASPGD|ASPL0000062493 - symbol:AN0654 species:162425 "Emer... 100 7.3e-08 2
UNIPROTKB|Q9P885 - symbol:carG "Geranylgeranyl pyrophosph... 99 2.1e-07 2
TAIR|locus:2115450 - symbol:GGPS1 "geranylgeranyl pyropho... 144 3.2e-07 1
TIGR_CMR|ECH_0455 - symbol:ECH_0455 "putative geranyltran... 111 3.6e-07 2
UNIPROTKB|Q9KTL2 - symbol:VC_0890 "Geranyltranstransferas... 95 4.4e-07 2
TIGR_CMR|VC_0890 - symbol:VC_0890 "geranyltranstransferas... 95 4.4e-07 2
UNIPROTKB|P0A5H8 - symbol:MT3506 "(2E,6E)-farnesyl diphos... 138 1.4e-06 1
UNIPROTKB|Q2GD75 - symbol:NSE_0694 "Putative geranyltrans... 96 3.4e-06 2
TIGR_CMR|NSE_0694 - symbol:NSE_0694 "putative geranyltran... 96 3.4e-06 2
UNIPROTKB|C9J7M1 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 97 1.7e-05 2
UNIPROTKB|P56966 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 98 1.9e-05 2
UNIPROTKB|E2R3P8 - symbol:GGPS1 "Uncharacterized protein"... 97 1.9e-05 2
UNIPROTKB|O95749 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 97 1.9e-05 2
UNIPROTKB|F1RGX0 - symbol:GGPS1 "Uncharacterized protein"... 97 1.9e-05 2
ZFIN|ZDB-GENE-030131-8742 - symbol:ggps1 "geranylgeranyl ... 99 2.4e-05 2
MGI|MGI:1341724 - symbol:Ggps1 "geranylgeranyl diphosphat... 96 3.1e-05 2
RGD|1359680 - symbol:Ggps1 "geranylgeranyl diphosphate sy... 96 3.1e-05 2
TAIR|locus:2089626 - symbol:AT3G14530 "AT3G14530" species... 126 3.3e-05 1
TIGR_CMR|CPS_1089 - symbol:CPS_1089 "geranyltranstransfer... 124 3.8e-05 1
UNIPROTKB|F1NHT9 - symbol:GGPS1 "Uncharacterized protein"... 96 4.5e-05 2
TAIR|locus:2046283 - symbol:AT2G18620 species:3702 "Arabi... 124 5.1e-05 1
UNIPROTKB|C9J6G3 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 97 5.6e-05 2
UNIPROTKB|P22939 - symbol:ispA "geranyl diphosphate synth... 122 6.3e-05 1
TAIR|locus:2093832 - symbol:AT3G29430 species:3702 "Arabi... 123 7.0e-05 1
TAIR|locus:2079028 - symbol:AT3G32040 species:3702 "Arabi... 123 7.1e-05 1
TAIR|locus:2087550 - symbol:AT3G20160 species:3702 "Arabi... 122 8.5e-05 1
UNIPROTKB|P80042 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 119 0.00021 1
SGD|S000005990 - symbol:BTS1 "Geranylgeranyl diphosphate ... 81 0.00026 2
TAIR|locus:2121149 - symbol:GGR "geranylgeranyl reductase... 117 0.00028 1
UNIPROTKB|Q4K5A6 - symbol:ispA "Geranyltranstransferase" ... 115 0.00038 1
UNIPROTKB|G4NEM8 - symbol:MGG_00758 "Geranylgeranyl pyrop... 91 0.00076 2
TAIR|locus:2048993 - symbol:GGPS2 "geranylgeranyl pyropho... 114 0.00078 1
FB|FBgn0019662 - symbol:qm "quemao" species:7227 "Drosoph... 89 0.00091 2
>TAIR|locus:2062315 [details] [associations]
symbol:GPS1 "geranyl diphosphate synthase 1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IGI;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0004659 "prenyltransferase activity"
evidence=IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 GO:GO:0009507
EMBL:CP002685 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0006744 GO:GO:0009790 EMBL:AC004077
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347 GO:GO:0004659
OMA:KPSVNAL GO:GO:0052924 EMBL:Y17376 EMBL:AY093006 EMBL:BT020524
IPI:IPI00537358 IPI:IPI00538487 IPI:IPI00657038 PIR:A84759
RefSeq:NP_001031483.1 RefSeq:NP_850234.1 UniGene:At.25503 PDB:3APZ
PDB:3AQ0 PDBsum:3APZ PDBsum:3AQ0 ProteinModelPortal:Q5HZ00
SMR:Q5HZ00 STRING:Q5HZ00 PRIDE:Q5HZ00 EnsemblPlants:AT2G34630.2
GeneID:818028 KEGG:ath:AT2G34630 TAIR:At2g34630 InParanoid:Q8RWM1
KO:K14066 ProtClustDB:PLN02890 EvolutionaryTrace:Q9FT89
Genevestigator:Q5HZ00 Uniprot:Q5HZ00
Length = 422
Score = 558 (201.5 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 115/208 (55%), Positives = 147/208 (70%)
Query: 156 RGIGSLSSVMGNKL-AILAGDL--LISRALVALASLKHTEVIMECYMQKTYNKTAALVSN 212
R G+L+++ ++ A+LA + L++ + + S M+ YMQKTY KTA+L+SN
Sbjct: 215 RACGALAALKNTEVVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISN 274
Query: 213 SCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIIT 272
SCKAVA L+GQ EVA LAFEYG+NLGLA+QLIDDILDFTGTSASLGK SL+D+R+G+IT
Sbjct: 275 SCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVIT 334
Query: 273 APILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDS 332
APILFAMEEFPQLR ++ +P NVD+ LEYLGKS GIQR E I S
Sbjct: 335 APILFAMEEFPQLREVVDQVEKDPRNVDIALEYLGKSKGIQRARELAMEHANLAAAAIGS 394
Query: 333 LPETHDVDATNARTALVHITQKIITRNK 360
LPET + D +R AL+ +T ++ITRNK
Sbjct: 395 LPETDNEDVKRSRRALIDLTHRVITRNK 422
Score = 496 (179.7 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 103/164 (62%), Positives = 131/164 (79%)
Query: 31 YGHQPTFRNSNENKKHLDPFSLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGK 90
+ HQ ++S+ ++ LDPFSLV DELSL+S +LR MV+AEVP+LASAA YFFK GV+GK
Sbjct: 66 FSHQLYHQSSSLVEEELDPFSLVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQGK 125
Query: 91 KLCPTVILLMATALNVCTPELSPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLD 150
+ T++LLMATALNV PE + + +LR RQ+ IAEITEMIHVASL+HDDVLD
Sbjct: 126 QFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDVLD 185
Query: 151 DADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVI 194
DADTRRG+GSL+ VMGNK+++LAGD L+SRA ALA+LK+TEV+
Sbjct: 186 DADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVV 229
Score = 40 (19.1 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 1 MLFSQLVYRIAARTPRNS--LPSCRWILSHR 29
MLF++ V RI+++ RN S + + SHR
Sbjct: 1 MLFTRSVARISSKFLRNRSFYGSSQSLASHR 31
>CGD|CAL0005672 [details] [associations]
symbol:orf19.7478 species:5476 "Candida albicans" [GO:0032476
"decaprenyl diphosphate synthase complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019418 "sulfide oxidation"
evidence=IEA] [GO:0070219 "cellular sulfide ion homeostasis"
evidence=IEA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IEA]
[GO:0008834 "di-trans,poly-cis-decaprenylcistransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 CGD:CAL0005672 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 eggNOG:COG0142
KO:K05355 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AACQ01000039 RefSeq:XP_718635.1 ProteinModelPortal:Q5AAL1
STRING:Q5AAL1 GeneID:3639664 KEGG:cal:CaO19.7478 Uniprot:Q5AAL1
Length = 510
Score = 297 (109.6 bits), Expect = 2.2e-52, Sum P(3) = 2.2e-52
Identities = 61/169 (36%), Positives = 100/169 (59%)
Query: 190 HTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDIL 249
+ E E Y+ KTY KTA+L+S SC+A A LSG ++++ +++G+NLGL +Q++DD+L
Sbjct: 346 NVEAAFEYYLHKTYLKTASLMSKSCRAAAVLSGAQDDIIENCYQFGRNLGLCFQIVDDML 405
Query: 250 DFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKS 309
D+T + ++GK S DL+ G+ TAPILFA ++ P+L I + P +V++ + K
Sbjct: 406 DYTSSDKTIGKPSQADLKLGLATAPILFAWKQEPKLGDLIARKFNQPGDVEIARRAVEKY 465
Query: 310 HGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKIITR 358
G+ +T E + LPE+ AR+AL +T ++TR
Sbjct: 466 DGVAQTKEMATMYCHQALKNLRVLPESE------ARSALELLTNSVLTR 508
Score = 193 (73.0 bits), Expect = 2.2e-52, Sum P(3) = 2.2e-52
Identities = 40/73 (54%), Positives = 55/73 (75%)
Query: 122 LDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRA 181
LD+ +Q+ +AEI EMIH ASL+HDDV+D +D+RRG S + NK+A+LAGD L+ RA
Sbjct: 191 LDILPKQRRLAEIVEMIHTASLLHDDVIDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRA 250
Query: 182 LVALASLKHTEVI 194
VA+A L++ EVI
Sbjct: 251 SVAIARLRNPEVI 263
Score = 96 (38.9 bits), Expect = 2.2e-52, Sum P(3) = 2.2e-52
Identities = 19/61 (31%), Positives = 38/61 (62%)
Query: 45 KHLDPFSLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATAL 104
K DPFS+V E+S ++ + +++ + P L + Y+F+ EGK + P ++L+++ AL
Sbjct: 46 KFSDPFSIVSHEMSNLAKSIANLIGSGHPTLNRVSSYYFE--AEGKNVRPLIVLILSKAL 103
Query: 105 N 105
+
Sbjct: 104 S 104
>UNIPROTKB|F6RJN8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:DAAA02035357 EMBL:DAAA02035358 EMBL:DAAA02035359
IPI:IPI00701533 UniGene:Bt.52184 ProteinModelPortal:F6RJN8
Ensembl:ENSBTAT00000008576 Uniprot:F6RJN8
Length = 418
Score = 325 (119.5 bits), Expect = 3.7e-52, Sum P(2) = 3.7e-52
Identities = 67/184 (36%), Positives = 110/184 (59%)
Query: 177 LISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGK 236
L+ + L S ++ Y++KT+ KTA+L++NSCKAV+ L V +A++YGK
Sbjct: 241 LVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGK 300
Query: 237 NLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNP 296
N+G+A+QLIDD+LDFT S +GK + DL+ G+ T P+LFA ++FP++ A I +P
Sbjct: 301 NVGIAFQLIDDVLDFTSCSEQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFGSP 360
Query: 297 ANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKII 356
+VD L+Y+ +S G+Q+TT I L + + R AL+ +++ ++
Sbjct: 361 GDVDRALQYVLQSDGVQQTTYLAQRYCHKAVSEISKLRPSPE------RDALIQLSEMVL 414
Query: 357 TRNK 360
TR+K
Sbjct: 415 TRDK 418
Score = 233 (87.1 bits), Expect = 3.7e-52, Sum P(2) = 3.7e-52
Identities = 58/158 (36%), Positives = 90/158 (56%)
Query: 37 FRNSNENKKHLDPFSLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTV 96
F + +K+ DPF + +L + +R + EL + Y F +G +GK P +
Sbjct: 86 FSETLSGEKYTDPFKIGWRDLKGLYEDIRKELFISTAELREMSEYHF-DG-KGKAFRPII 143
Query: 97 ILLMATALNVCTPELSPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRR 156
++LMA A N+ N N ++ Q+ IA I EMIH ASL+HDD++DDA +RR
Sbjct: 144 VVLMARACNI-----HHNNARN-----VQASQRAIALIAEMIHTASLVHDDIIDDASSRR 193
Query: 157 GIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVI 194
G +++ + G K A+LAGDL++S A +ALA + +T VI
Sbjct: 194 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVI 231
>UNIPROTKB|Q5T2R2 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006744
"ubiquinone biosynthetic process" evidence=IEA;IDA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
EMBL:AL390961 GO:GO:0046982 GO:GO:0051290 eggNOG:COG0142
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0050347 EMBL:AF118395 EMBL:AB210838
EMBL:AK223414 EMBL:BC049211 EMBL:BC063635 IPI:IPI00440542
IPI:IPI00456157 IPI:IPI00719538 RefSeq:NP_055132.2
UniGene:Hs.558468 ProteinModelPortal:Q5T2R2 SMR:Q5T2R2
STRING:Q5T2R2 PhosphoSite:Q5T2R2 DMDM:74744657 PaxDb:Q5T2R2
PRIDE:Q5T2R2 Ensembl:ENST00000376203 Ensembl:ENST00000376215
GeneID:23590 KEGG:hsa:23590 UCSC:uc001isv.3 UCSC:uc001isw.3
CTD:23590 GeneCards:GC10P026986 HGNC:HGNC:17759 HPA:HPA038032
MIM:607429 MIM:614651 neXtProt:NX_Q5T2R2 Orphanet:254898
PharmGKB:PA134982512 HOVERGEN:HBG054389 InParanoid:Q5T2R2 KO:K12504
OMA:QQFPELH OrthoDB:EOG4TQM94 BioCyc:MetaCyc:HS07530-MONOMER
BRENDA:2.5.1.11 GenomeRNAi:23590 NextBio:46232 ArrayExpress:Q5T2R2
Bgee:Q5T2R2 CleanEx:HS_PDSS1 Genevestigator:Q5T2R2
GermOnline:ENSG00000148459 Uniprot:Q5T2R2
Length = 415
Score = 311 (114.5 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 66/184 (35%), Positives = 108/184 (58%)
Query: 177 LISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGK 236
L+ + L S ++ Y++KT+ KTA+L++NSCKAV+ L V +A++YGK
Sbjct: 238 LVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGK 297
Query: 237 NLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNP 296
N+G+A+QLIDD+LDFT S +GK + DL+ G+ T P+LFA ++FP++ A I P
Sbjct: 298 NVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLP 357
Query: 297 ANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKII 356
+VD +Y+ +S G+Q+TT I L + + R AL+ +++ ++
Sbjct: 358 GDVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLRPSPE------RDALIQLSEIVL 411
Query: 357 TRNK 360
TR+K
Sbjct: 412 TRDK 415
Score = 246 (91.7 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 68/192 (35%), Positives = 108/192 (56%)
Query: 4 SQLVYRIAARTPRNSLPS-CRWILSHRRYGHQPTFRNSNENKKHLDPFSLVGDELSLISM 62
SQ+ Y + ++ P+ CR +S R+ H ++ +K+ DPF L +L +
Sbjct: 53 SQIPYINLVKHLTSACPNVCR--IS--RFHHTTPDSKTHSGEKYTDPFKLGWRDLKGLYE 108
Query: 63 RLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNVCTPELSPNVLGNTLIL 122
+R ++ EL + Y+F +G +GK P ++ LMA A N+ N N+
Sbjct: 109 DIRKELLISTSELKEMSEYYF-DG-KGKAFRPIIVALMARACNI-----HHN---NSR-- 156
Query: 123 DLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRAL 182
++ Q+ IA I EMIH ASL+HDDV+DDA +RRG +++ + G K A+LAGDL++S A
Sbjct: 157 HVQASQRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAAS 216
Query: 183 VALASLKHTEVI 194
+ALA + +T VI
Sbjct: 217 IALARIGNTTVI 228
>UNIPROTKB|F1RTW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GeneTree:ENSGT00530000063378 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 OMA:QQFPELH EMBL:CU571224
Ensembl:ENSSSCT00000012105 Uniprot:F1RTW8
Length = 410
Score = 312 (114.9 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 66/184 (35%), Positives = 108/184 (58%)
Query: 177 LISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGK 236
L+ + L S ++ Y++KT+ KTA+L++NSCKAV+ L V +A++YGK
Sbjct: 233 LVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGK 292
Query: 237 NLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNP 296
N+G+A+QLIDD+LDFT S +GK + DL+ G+ T P+LFA ++FP++ A I P
Sbjct: 293 NVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLP 352
Query: 297 ANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKII 356
+VD +Y+ +S G+Q+TT I L + + R AL+ +++ ++
Sbjct: 353 GDVDRARQYVLQSDGVQQTTYLAQRYCHEAIREISKLRPSPE------REALIQLSEIVL 406
Query: 357 TRNK 360
TR+K
Sbjct: 407 TRDK 410
Score = 242 (90.2 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 60/155 (38%), Positives = 92/155 (59%)
Query: 40 SNENKKHLDPFSLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILL 99
+ +K+ DPF L +L + +R + EL + Y+F +G +GK P +++L
Sbjct: 81 TRSGEKYTDPFKLGWRDLKGLYEDIRKELFISTTELKEMSEYYF-DG-KGKAFRPIIVVL 138
Query: 100 MATALNVCTPELSPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIG 159
MA A N+ N N+ D++ Q+ IA I EMIH ASL+HDDV+DDA +RRG
Sbjct: 139 MARACNI-----HHN---NSR--DMQASQRTIALIAEMIHTASLVHDDVIDDASSRRGKH 188
Query: 160 SLSSVMGNKLAILAGDLLISRALVALASLKHTEVI 194
+++ + G K A+LAGDL++S A +ALA + +T VI
Sbjct: 189 TVNKIWGEKKAVLAGDLILSAASIALARIGNTTVI 223
>UNIPROTKB|F1PV51 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0051290 GeneTree:ENSGT00530000063378
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0050347 OMA:QQFPELH EMBL:AAEX03001171
Ensembl:ENSCAFT00000006952 Uniprot:F1PV51
Length = 365
Score = 311 (114.5 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 66/184 (35%), Positives = 108/184 (58%)
Query: 177 LISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGK 236
L+ + L S ++ Y++KT+ KTA+L++NSCKAV+ L V +A++YGK
Sbjct: 188 LVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGK 247
Query: 237 NLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNP 296
N+G+A+QLIDD+LDFT S +GK + DL+ G+ T P+LFA ++FP++ A I P
Sbjct: 248 NVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLP 307
Query: 297 ANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKII 356
+VD +Y+ +S G+Q+TT I L + + R AL+ +++ ++
Sbjct: 308 GDVDRARQYVLQSDGVQQTTYLAQRYCHEAIREISKLRPSAE------RDALIQLSEIVL 361
Query: 357 TRNK 360
TR+K
Sbjct: 362 TRDK 365
Score = 241 (89.9 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 59/155 (38%), Positives = 93/155 (60%)
Query: 40 SNENKKHLDPFSLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILL 99
+ +K+ DPF L +L+ + +R ++ EL + Y+F +G +GK P +++L
Sbjct: 36 TQSGEKYTDPFKLGWRDLNGLYEDIRKELLISTTELKEMSEYYF-DG-KGKAFRPIIVVL 93
Query: 100 MATALNVCTPELSPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIG 159
MA A N+ N+ D++ Q+ IA I EMIH ASL+HDDV+DDA +RRG
Sbjct: 94 MARACNIHH--------SNSR--DVQASQRSIALIAEMIHTASLVHDDVIDDASSRRGKH 143
Query: 160 SLSSVMGNKLAILAGDLLISRALVALASLKHTEVI 194
+++ + G K A+LAGDL++S A +ALA + +T VI
Sbjct: 144 TVNKIWGEKKAVLAGDLILSAASMALARIGNTTVI 178
>ASPGD|ASPL0000038406 [details] [associations]
symbol:AN10340 species:162425 "Emericella nidulans"
[GO:0032476 "decaprenyl diphosphate synthase complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016209 "antioxidant
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0019418 "sulfide oxidation" evidence=IEA]
[GO:0070219 "cellular sulfide ion homeostasis" evidence=IEA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001306
GO:GO:0006744 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 ProteinModelPortal:C8VJN5
EnsemblFungi:CADANIAT00010341 OMA:YLHKTYL Uniprot:C8VJN5
Length = 456
Score = 275 (101.9 bits), Expect = 2.0e-50, Sum P(3) = 2.0e-50
Identities = 57/170 (33%), Positives = 94/170 (55%)
Query: 191 TEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILD 250
T+ + Y+QKTY KTA+L+S SC+A A L +V A+ YG+NLGLA+QL+DD+LD
Sbjct: 293 TDDTISYYLQKTYLKTASLISKSCRAAALLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLD 352
Query: 251 FTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSH 310
+T + LGK + DL G+ TAP+LFA ++ P+L + +V+ E + +++
Sbjct: 353 YTVSGVELGKPAGADLELGLATAPLLFAWKQHPELGPLVGRKFCREGDVEKARELVYRAN 412
Query: 311 GIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKIITRNK 360
G+++T I P++ A+ L+ + +K + R K
Sbjct: 413 GVEQTRALAQEYADKAIAAISPFPDSE------AKAGLIEMCRKTMNRRK 456
Score = 192 (72.6 bits), Expect = 2.0e-50, Sum P(3) = 2.0e-50
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 117 GNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDL 176
G+ IL +RR +AEITE+IH ASL+HDDV+D+A TRR S + GNK+A+LAGD
Sbjct: 188 GDENILPSQRR---LAEITELIHTASLLHDDVIDNALTRRSSNSANIEFGNKMAVLAGDF 244
Query: 177 LISRALVALASLKHTEV 193
L+ RA VALA L+ EV
Sbjct: 245 LLGRASVALARLRDPEV 261
Score = 97 (39.2 bits), Expect = 2.0e-50, Sum P(3) = 2.0e-50
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 47 LDPFSLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNV 106
+DP +VG EL ++ +R ++ + P L A Y+ + EGK + P ++LLM+ A +
Sbjct: 78 VDPLRIVGKELKFLTKNIRQLLGSGHPTLDKVAKYYTRS--EGKHMRPLLVLLMSQATAL 135
Query: 107 CTP 109
TP
Sbjct: 136 TTP 138
>FB|FBgn0051005 [details] [associations]
symbol:qless "qless" species:7227 "Drosophila melanogaster"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0014019 "neuroblast development"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 EMBL:AE014297 GO:GO:0043066 GO:GO:0033554
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0014019
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 OMA:KPSVNAL
FlyBase:FBgn0051005 EMBL:BT044087 RefSeq:NP_733425.1
UniGene:Dm.5492 SMR:Q9V9Z3 IntAct:Q9V9Z3 MINT:MINT-1009288
STRING:Q9V9Z3 EnsemblMetazoa:FBtr0085769 GeneID:43697
KEGG:dme:Dmel_CG31005 UCSC:CG31005-RA CTD:43697 InParanoid:Q9V9Z3
GenomeRNAi:43697 NextBio:835306 Uniprot:Q9V9Z3
Length = 436
Score = 292 (107.8 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
Identities = 51/118 (43%), Positives = 83/118 (70%)
Query: 198 YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSAS 257
Y+ KTY KTA+L++N+ KA A ++ + VA +AF+YG+N+GLA+QL+DD+LDF ++
Sbjct: 280 YLTKTYRKTASLIANALKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQ 339
Query: 258 LGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRT 315
+GK + DL+ G+ TAP+LFA E++P+L + P +V+ E + KSHG+++T
Sbjct: 340 MGKPTAADLKLGLATAPVLFACEKYPELNPMVMRRFSEPGDVERAFELVHKSHGLEQT 397
Score = 202 (76.2 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
Identities = 53/149 (35%), Positives = 89/149 (59%)
Query: 47 LDPFSLVGDELSLISMRLRSMVVAEV--PELASAAGYFFKEGVEGKKLCPTVILLMATAL 104
+DP+ ++ D+L +R ++ + PEL + A Y+F +G +GK L P V +LMA A+
Sbjct: 111 IDPYIILDDDLKYFYDDVRYLLKSGTSQPELDTIASYYF-DG-QGKALRPMVTMLMAKAI 168
Query: 105 NVCTPELSPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSV 164
N L N + L+ +Q+ IA +EM+H ASL+HDDV+D +D RRG S++++
Sbjct: 169 NY---HL--NNESHQLV----HKQRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNAL 219
Query: 165 MGNKLAILAGDLLISRALVALASLKHTEV 193
+K +AGD ++S A + +A L+ +V
Sbjct: 220 WNHKKVTMAGDYILSIASIMIARLRSDDV 248
>POMBASE|SPBPJ4664.01 [details] [associations]
symbol:dps1 "decaprenyl diphosphate synthase subunit
Dps1" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IC] [GO:0006119 "oxidative phosphorylation"
evidence=TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IMP]
[GO:0019418 "sulfide oxidation" evidence=IMP] [GO:0019646 "aerobic
electron transport chain" evidence=TAS] [GO:0032476 "decaprenyl
diphosphate synthase complex" evidence=IPI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0070219 "cellular sulfide ion
homeostasis" evidence=IMP] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IMP]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 PomBase:SPBPJ4664.01 GO:GO:0005743
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016740 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016209
GO:GO:0019646 GO:GO:0070219 GO:GO:0006119 GO:GO:0019418
GO:GO:0006744 eggNOG:COG0142 HOGENOM:HOG000009104 KO:K05355
OrthoDB:EOG4HB1V2 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0032476 EMBL:D84311 EMBL:D89265 PIR:JC5429
PIR:T43193 RefSeq:NP_595276.1 ProteinModelPortal:O43091
STRING:O43091 EnsemblFungi:SPBPJ4664.01.1 GeneID:2541402
KEGG:spo:SPBPJ4664.01 OMA:KPSVNAL NextBio:20802509 Uniprot:O43091
Length = 378
Score = 267 (99.0 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 63/190 (33%), Positives = 108/190 (56%)
Query: 171 ILAGDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATL 230
++ G+ L + + +SL+ + + Y++K++ KTA+L+S SCKA L VAT
Sbjct: 195 LVRGEFLQLKNTMDPSSLEIKQSNFDYYIEKSFLKTASLISKSCKASTILGQCSPTVATA 254
Query: 231 AFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFIN 290
A EYG+ +G A+QL+DD+LD+T +LGKA+ DL+ G+ TAP+LFA +++P+L A I
Sbjct: 255 AGEYGRCIGTAFQLMDDVLDYTSKDDTLGKAAGADLKLGLATAPVLFAWKKYPELGAMIV 314
Query: 291 SSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVH 350
+ ++P+++ + + I++T + LP++ AR AL
Sbjct: 315 NRFNHPSDIQRARSLVECTDAIEQTITWAKEYIKKAKDSLLCLPDSP------ARKALFA 368
Query: 351 ITQKIITRNK 360
+ K+ITR K
Sbjct: 369 LADKVITRKK 378
Score = 225 (84.3 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 60/167 (35%), Positives = 98/167 (58%)
Query: 37 FRNSNENKKHLDPFSLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTV 96
F +N N HL + +EL IS +R M+ + L + Y+ +GK++ P++
Sbjct: 26 FSTTNRNASHL-----IKNELEQISPGIRQMLNSNSEFLEECSKYYTI--AQGKQMRPSL 78
Query: 97 ILLMATALNVCTPELSPNVLGNTLILD--LRR--------RQQCIAEITEMIHVASLIHD 146
+LLM+ A ++C + +V+G+ I D LR Q +A+ITEMIH+ASL+HD
Sbjct: 79 VLLMSKATSLCHG-IDRSVVGDKYIDDDDLRSFSTGQILPSQLRLAQITEMIHIASLLHD 137
Query: 147 DVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEV 193
DV+D A+ RRG S + GN+ +ILAG+ +++RA A+A L++ +V
Sbjct: 138 DVIDHANVRRGSPSSNVAFGNRRSILAGNFILARASTAMARLRNPQV 184
>WB|WBGene00000761 [details] [associations]
symbol:coq-1 species:6239 "Caenorhabditis elegans"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0008340 GO:GO:0018991 GO:GO:0040010
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0040011 GO:GO:0040017 GO:GO:0006744 eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 EMBL:FO080645
PIR:G87775 PIR:T25573 RefSeq:NP_491588.1 ProteinModelPortal:P91093
SMR:P91093 STRING:P91093 PaxDb:P91093 EnsemblMetazoa:C24A11.9
GeneID:172190 KEGG:cel:CELE_C24A11.9 UCSC:C24A11.9 CTD:172190
WormBase:C24A11.9 InParanoid:P91093 OMA:PNRNEST NextBio:874409
Uniprot:P91093
Length = 393
Score = 256 (95.2 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 50/145 (34%), Positives = 85/145 (58%)
Query: 195 MECYMQKTYNKTAALVSNSCKAVAYLS-GQREEVATLAFEYGKNLGLAYQLIDDILDFTG 253
M+ Y++KT+ KTA+L ++SC++ A L+ G ++ +AFEYG+NLG+A+QL DD+LDF
Sbjct: 232 MKAYIEKTHRKTASLFASSCRSAAILADGSDLKLHEIAFEYGRNLGIAFQLADDLLDFIA 291
Query: 254 TSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQ 313
T+ +GK DL+ G+ TAP+L+A E++P+L + + + + E + S G+
Sbjct: 292 TADEMGKPVAADLKLGLATAPVLYACEQYPELNTMLLRKFKHDGDAEKAREIVVNSDGMD 351
Query: 314 RTTEXXXXXXXXXXXXIDSLPETHD 338
+T SLP ++
Sbjct: 352 KTRRLIDSYSQKAVEMASSLPNRNE 376
Score = 211 (79.3 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 51/123 (41%), Positives = 72/123 (58%)
Query: 81 YFFKEGVEGKKLCPTVILLMATALN-VCTPELSPNVL--------GNTLILDLRRRQQCI 131
Y+F++G GK L PTV LLM A N +S L G L + + Q I
Sbjct: 81 YYFQQG--GKMLRPTVSLLMGNACNSAANRSISEEYLAMLSTERSGIAAHLSVCQNQYKI 138
Query: 132 AEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHT 191
I EMIH ASL+HDDV+D+A+TRRG S+++V GNK+++L GD +++RA L S+
Sbjct: 139 GMIAEMIHTASLVHDDVIDEANTRRGSASVNAVWGNKMSVLVGDFILARATQILCSIGKP 198
Query: 192 EVI 194
+I
Sbjct: 199 NII 201
>SGD|S000000207 [details] [associations]
symbol:COQ1 "Hexaprenyl pyrophosphate synthetase"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IMP;IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA;IMP] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232 SGD:S000000207
GO:GO:0005739 GO:GO:0005743 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:BK006936 GO:GO:0006744
EMBL:J05547 EMBL:Z35872 EMBL:AY558099 EMBL:Z26494 PIR:A36625
RefSeq:NP_009557.1 ProteinModelPortal:P18900 SMR:P18900
DIP:DIP-1103N IntAct:P18900 MINT:MINT-427151 STRING:P18900
PaxDb:P18900 PRIDE:P18900 EnsemblFungi:YBR003W GeneID:852288
KEGG:sce:YBR003W CYGD:YBR003w eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 KO:K05355
OMA:RASSIFA OrthoDB:EOG4HB1V2 BioCyc:MetaCyc:MONOMER-13702
BRENDA:2.5.1.33 NextBio:970928 Genevestigator:P18900
GermOnline:YBR003W GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 Uniprot:P18900
Length = 473
Score = 305 (112.4 bits), Expect = 3.2e-34, Sum P(2) = 3.2e-34
Identities = 78/214 (36%), Positives = 112/214 (52%)
Query: 151 DADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVI---MECYMQKTYNKTA 207
D DT L V KL + D + L L H ++I E Y+ KTY KTA
Sbjct: 267 DIDTIENGHKLLPVPSKKLEVKEHDFRVPSRQQGL-QLSHDQIIETAFEYYIHKTYLKTA 325
Query: 208 ALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLR 267
AL+S SC+ A LSG V +++G+NLG+ +QL+DD+LDFT + LGK S DL+
Sbjct: 326 ALISKSCRCAAILSGASPAVIDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSGADLK 385
Query: 268 NGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXX 327
GI TAP+LFA +E P L I+ + +V+ ++ + +GI +T
Sbjct: 386 LGIATAPVLFAWKEDPSLGPLISRNFSERGDVEKTIDSVRLHNGIAKTKILAEEYRDKAL 445
Query: 328 XXI-DSLPETHDVDATNARTALVHITQKIITRNK 360
+ DSLPE+ +AR+AL +T I+TR K
Sbjct: 446 QNLRDSLPES------DARSALEFLTNSILTRRK 473
Score = 186 (70.5 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 36/68 (52%), Positives = 52/68 (76%)
Query: 127 RQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALA 186
+Q+ +AEI EMIH ASL+HDDV+D +DTRRG S ++ NK+A+LAGD L+ RA V+++
Sbjct: 174 KQRRLAEIVEMIHTASLLHDDVIDHSDTRRGRPSGNAAFTNKMAVLAGDFLLGRATVSIS 233
Query: 187 SLKHTEVI 194
L + EV+
Sbjct: 234 RLHNPEVV 241
Score = 87 (35.7 bits), Expect = 3.2e-34, Sum P(2) = 3.2e-34
Identities = 18/58 (31%), Positives = 36/58 (62%)
Query: 48 DPFSLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALN 105
+P SLV E++ ++ + +++ + P L Y+F+ EGKK+ P ++LL++ AL+
Sbjct: 44 NPISLVSKEMNTLAKNIVALIGSGHPVLNKVTSYYFE--TEGKKVRPLLVLLLSRALS 99
Score = 38 (18.4 bits), Expect = 4.3e-29, Sum P(2) = 4.3e-29
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 101 ATALNVCTPELSPNVLGNTLILDLRRRQQCIAE 133
A ALN + ++P +L N I + + +A+
Sbjct: 26 AVALNAASKLVTPKILWNNPISLVSKEMNTLAK 58
>MGI|MGI:1889278 [details] [associations]
symbol:Pdss1 "prenyl (solanesyl) diphosphate synthase,
subunit 1" species:10090 "Mus musculus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISO;IDA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISO;IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IDA] [GO:0051290 "protein heterotetramerization"
evidence=IPI] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00232 MGI:MGI:1889278 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006744 UniGene:Mm.249752 GO:GO:0046982 GO:GO:0051290
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
CTD:23590 HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH BRENDA:2.5.1.11
EMBL:AB210841 EMBL:CT030013 EMBL:BC026820 EMBL:BC107273
EMBL:BC107274 EMBL:AF118855 IPI:IPI00123984 RefSeq:NP_062374.2
ProteinModelPortal:Q33DR2 SMR:Q33DR2 STRING:Q33DR2
PhosphoSite:Q33DR2 PRIDE:Q33DR2 Ensembl:ENSMUST00000053729
GeneID:56075 KEGG:mmu:56075 UCSC:uc008inq.1 InParanoid:Q33DR2
NextBio:311864 Bgee:Q33DR2 Genevestigator:Q33DR2
GermOnline:ENSMUSG00000026784 Uniprot:Q33DR2
Length = 409
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 81/222 (36%), Positives = 124/222 (55%)
Query: 141 ASLIHDDVLDDADTRRG-IGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVIMECYM 199
A L D +L A IG+ + V + LA + DL+ L L S ++ Y+
Sbjct: 198 AVLAGDLILSAASVALARIGNTAVV--SMLAQVIEDLVRGEFL-QLGSKENENERFAHYL 254
Query: 200 QKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLG 259
+KT+ KTA+L++NSCKAV+ L V +A++YGKN+G+A+QLIDD+LDFT S +G
Sbjct: 255 EKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMG 314
Query: 260 KASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTEXX 319
K + DL+ GI T P+LFA ++FP++ A I P +VD +Y+ +S G+Q+TT
Sbjct: 315 KPTSADLKLGIATGPVLFACQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLA 374
Query: 320 XXXXXXXXXXIDSL-PETHDVDATNARTALVHITQKIITRNK 360
I L P T R AL+ +++ ++TR+K
Sbjct: 375 QQYCHKAVREIRKLRPSTE-------RDALIQLSESVLTRDK 409
Score = 239 (89.2 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 60/167 (35%), Positives = 96/167 (57%)
Query: 28 HRRYGHQPTFRNSNENKKHLDPFSLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGV 87
H+R + R + +K+ DPF L +L + +R + EL + Y+F +G
Sbjct: 68 HQRTPAMCSCRQTQSGEKYSDPFKLGWRDLKGLYEDIRKELHISTRELKDMSEYYF-DG- 125
Query: 88 EGKKLCPTVILLMATALNVCTPELSPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDD 147
+GK P +++LMA A C N+ N +++ Q+ IA + EMIH A+L+HDD
Sbjct: 126 KGKAFRPIIVVLMARA---C------NIHHNNA-REMQASQRSIALVAEMIHTATLVHDD 175
Query: 148 VLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVI 194
V+DDA +RRG +++ + G K A+LAGDL++S A VALA + +T V+
Sbjct: 176 VIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALARIGNTAVV 222
>DICTYBASE|DDB_G0280293 [details] [associations]
symbol:coq1 "trans-prenyltransferase" species:44689
"Dictyostelium discoideum" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0006743 "ubiquinone metabolic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
dictyBase:DDB_G0280293 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GenomeReviews:CM000152_GR
GO:GO:0046872 EMBL:AAFI02000035 GO:GO:0006744 eggNOG:COG0142
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0006743 RefSeq:XP_641356.1 HSSP:Q9WY08
ProteinModelPortal:Q54VJ9 STRING:Q54VJ9 EnsemblProtists:DDB0231590
GeneID:8622490 KEGG:ddi:DDB_G0280293 OMA:RIRPTIV Uniprot:Q54VJ9
Length = 456
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 87/297 (29%), Positives = 147/297 (49%)
Query: 73 PELASAAGYFFKEGVEGKKLCPTVILLMATALN--VCTPELSPNVLGNTLILDLRRRQQC 130
P L+S + Y+F+ ++GK++ PT++LL++ AL+ V +L + +
Sbjct: 168 PILSSISSYYFE--LKGKRIRPTIVLLLSKALSSTVHGSQLKLAEIVEMIHTASLVHDDV 225
Query: 131 IAEITEMIHVASLIHD-----DVL-DDADTRRGIGSLSSVMGNKLAILAGDLLISRALVA 184
I E + V S+ H +L D R LS++ + L
Sbjct: 226 IDEASTRRDVISINHSYTNKLAILCGDYLLARASVVLSTIRNPDVTECMSTALAELVEGE 285
Query: 185 LASLKHTEVI-MECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQ 243
K V+ + Y+QKTY KT +L++NSC++ A LSG + ++ E+GKNLGLA+Q
Sbjct: 286 FMQAKSNGVVSFDNYLQKTYLKTGSLITNSCRSAAILSGADSNIINISTEFGKNLGLAFQ 345
Query: 244 LIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVIL 303
++DD+LD+TG++ GKA+ DL G+ TAP+L+A +EFPQL I +V+
Sbjct: 346 IVDDLLDYTGSAEECGKATSVDLTLGLATAPVLYATQEFPQLEKLIKRKFSEIGDVEEAK 405
Query: 304 EYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKIITRNK 360
+ S GI++T + LP++ +R L+ ++ ++TR K
Sbjct: 406 RLVALSKGIEKTRNLAIEYCNRAIQSLLKLPQSE------SRDLLITLSHIVVTRTK 456
>ZFIN|ZDB-GENE-030131-4430 [details] [associations]
symbol:pdss1 "prenyl (decaprenyl) diphosphate
synthase, subunit 1" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 ZFIN:ZDB-GENE-030131-4430
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:23590
HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH OrthoDB:EOG4TQM94
EMBL:CR385039 EMBL:BC093175 IPI:IPI00493659 RefSeq:NP_001017656.1
UniGene:Dr.78018 STRING:Q567H1 Ensembl:ENSDART00000040865
GeneID:550349 KEGG:dre:550349 InParanoid:Q567H1 NextBio:20879604
Uniprot:Q567H1
Length = 411
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 98/339 (28%), Positives = 170/339 (50%)
Query: 41 NENKKHLDPFSLVGDELSLISMRLRSMVVAEVPELASAAGYFFK-EGVEGKKLCPTV--- 96
+ + K DPFSLV +L I ++ ++ EL + Y+F +G + + +
Sbjct: 83 HSDAKLKDPFSLVQKDLQNIYDDIKQQLLVSKAELKALCDYYFDGKGKAFRPMIVILMAR 142
Query: 97 ----------ILLMATALNVCTPEL--SPNVLGNTLI--LDLRRRQQCIAEITEMIHVAS 142
+LL A E+ + +++ + +I D RR + I + A
Sbjct: 143 ACNVHSNKEGVLLPAQRSIAMISEMIHTASLVHDDVIDDSDKRRGKNTINNVWGE-RKAI 201
Query: 143 LIHDDVLDDADTRRG-IGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVIMECYMQK 201
L D +L A IG+ + V + L+ + DL + + L S ++ + Y++K
Sbjct: 202 LAGDFILSAASMALARIGNTTVV--SVLSQVIEDL-VRGEFMQLGSKENENERFKHYLEK 258
Query: 202 TYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKA 261
T+ KTA+L++NSCKAV+ L EV +A++YG+N+G+A+QL+DDILDFT + LGK
Sbjct: 259 TFKKTASLIANSCKAVSILVNSDPEVHEIAYQYGRNVGIAFQLVDDILDFTSNANCLGKP 318
Query: 262 SLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTEXXXX 321
S DL+ G+ T P+LFA ++FP+L + I + +VD +Y+ KS G+++T
Sbjct: 319 SAADLKLGLATGPVLFACQQFPELHSMIMRRFSSDGDVDRAWQYVLKSDGVEQTNYLAQH 378
Query: 322 XXXXXXXXIDSLPETHDVDATNARTALVHITQKIITRNK 360
I L + + R AL+ +T+ ++ R+K
Sbjct: 379 YCQEAIRQISRLRPSSE------RDALIRLTELVLRRDK 411
>TAIR|locus:2020362 [details] [associations]
symbol:SPS2 "solanesyl diphosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IGI;RCA] [GO:0009536 "plastid"
evidence=IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IGI] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007651 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:KLYRFGY KO:K05356 ProtClustDB:PLN02857 GO:GO:0052924
PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749 EMBL:AB104727
EMBL:AB188498 EMBL:BT028962 EMBL:BT004246 IPI:IPI00518205
PIR:C86306 RefSeq:NP_173148.2 UniGene:At.43587
ProteinModelPortal:Q76FS5 SMR:Q76FS5 STRING:Q76FS5 PaxDb:Q76FS5
PRIDE:Q76FS5 EnsemblPlants:AT1G17050.1 GeneID:838275
KEGG:ath:AT1G17050 TAIR:At1g17050 InParanoid:Q76FS5
PhylomeDB:Q76FS5 BioCyc:ARA:AT1G17050-MONOMER
BioCyc:MetaCyc:AT1G17050-MONOMER Genevestigator:Q76FS5
Uniprot:Q76FS5
Length = 417
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 98/306 (32%), Positives = 154/306 (50%)
Query: 50 FSLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLM--ATALNVC 107
F +V D+L ++ L S+V AE P L SAA F G GK++ P ++ L+ ATA
Sbjct: 99 FEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAG--GKRMRPGLVFLVSRATAELAG 156
Query: 108 TPELSPNV--LGNTL------------ILD---LRRRQQCIAEITEMIHVASLIHDDVLD 150
EL+ LG + +LD +RR ++ + E+ VA L D +
Sbjct: 157 LKELTVEHRRLGEIIEMIHTASLIHDDVLDESDMRRGRETVHELFGT-RVAVLAGDFMFA 215
Query: 151 DADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVIMECYMQKTYNKTAALV 210
A + +L ++ KL S + +SL +V ++ YM K+Y KTA+LV
Sbjct: 216 QASWY--LANLENLEVIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLKSYYKTASLV 273
Query: 211 SNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGI 270
+ S K A S +VA +++GKNLGL++Q++DDILDFT ++ LGK + DL G
Sbjct: 274 AASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGN 333
Query: 271 ITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXI 330
ITAP++FA+E P+LR I S P +++ +E + GI++ E +
Sbjct: 334 ITAPVIFALENEPRLREIIESEFCEPGSLEEAIEIVRNRGGIKKAQELAKEKAELALKNL 393
Query: 331 DSLPET 336
+ LP +
Sbjct: 394 NCLPRS 399
>UNIPROTKB|E1BZW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:AADN02000555 IPI:IPI00572129
ProteinModelPortal:E1BZW8 Ensembl:ENSGALT00000012224
NextBio:20823389 Uniprot:E1BZW8
Length = 366
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 98/365 (26%), Positives = 172/365 (47%)
Query: 15 PRNSLPSCRWILSHRRYGHQPTFRNSNENKKHLDPFSLVGDELSLISMRLRSMVVAEVPE 74
P L S W H + + ++K+ DPF L +L + ++ ++ E
Sbjct: 12 PFPKLCSIPWRFHHTSTALMCSCSKTVSDEKYQDPFQLGRKDLKNLYEDIKKELLVSTAE 71
Query: 75 LASAAGYFFKEGVEGKKLCPTVILLMATALN------VCTPELSPNVLGNTL-------- 120
L Y+F + + V++ A ++ V + S ++ +
Sbjct: 72 LREMCEYYFDGKGKAFRPMIVVLMARACNIHHSNSREVQASQRSVAIIAEMIHTASLVHD 131
Query: 121 -ILD---LRRRQQCIAEITEMIHVASLIHDDVLDDADTRRG-IGSLSSVMGNKLAILAGD 175
++D RR + + +I A L D +L A IG+ + + + L + D
Sbjct: 132 DVIDDANSRRGKMTVNQIWGE-RKAVLAGDFILSAASLALARIGNTTII--SVLTQVIED 188
Query: 176 LLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYG 235
L+ L L S ++ Y++KT+ KTA+L++NSCKAV+ L +V +A++YG
Sbjct: 189 LVRGEFL-QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSILGCPDPKVHEIAYQYG 247
Query: 236 KNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDN 295
KN+G+A+QLIDD+LDFT + LGK + DL+ G+ T P+LFA +FP++ A I
Sbjct: 248 KNVGIAFQLIDDVLDFTSCADHLGKPAAADLKLGLATGPVLFACRQFPEMNAMIMRRFSK 307
Query: 296 PANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKI 355
P +V+ +Y+ +S G+Q+TT I L + + R AL+ +T+ +
Sbjct: 308 PGDVERARKYVLQSDGVQQTTYLAQRYCHEATREISKLRPSPE------REALIQLTEMV 361
Query: 356 ITRNK 360
+ R+K
Sbjct: 362 LMRDK 366
>TAIR|locus:2202940 [details] [associations]
symbol:SPS1 "solanesyl diphosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IGI;IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IGI;RCA]
InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005783 EMBL:CP002684 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007260 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
BRENDA:2.5.1.11 EMBL:AB071514 EMBL:AB188497 EMBL:BT025550
EMBL:AK229738 IPI:IPI00525401 IPI:IPI00542022 IPI:IPI00846461
PIR:F96813 RefSeq:NP_001077840.1 RefSeq:NP_177972.2
UniGene:At.34283 ProteinModelPortal:Q8S948 SMR:Q8S948 STRING:Q8S948
PRIDE:Q8S948 EnsemblPlants:AT1G78510.1 GeneID:844187
KEGG:ath:AT1G78510 TAIR:At1g78510 InParanoid:Q8S948 KO:K05356
OMA:EFIVERK ProtClustDB:PLN02857 BioCyc:ARA:AT1G78510-MONOMER
BioCyc:MetaCyc:AT1G78510-MONOMER Genevestigator:Q8S948
GO:GO:0052924 PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749
Uniprot:Q8S948
Length = 406
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 93/304 (30%), Positives = 146/304 (48%)
Query: 50 FSLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLM--ATALNVC 107
F LV +L ++ L S+V AE P L SAA F G GK++ P ++ L+ ATA
Sbjct: 88 FELVAVDLQTLNDNLLSIVGAENPVLISAAEQIF--GAGGKRMRPGLVFLVSHATAELAG 145
Query: 108 TPELSPNVLGNTLILDLRRRQQCI----AEITEMIHVASLIHDDVLDDADTRRG---IGS 160
EL+ I+++ I + ++M +H+ G
Sbjct: 146 LKELTTEHRRLAEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQ 205
Query: 161 LSSVMGNKLAILAGDLLISRALVALAS--LKHTEVIMEC------YMQKTYNKTAALVSN 212
S + N L L LIS+ + AS +K + +C Y+ K++ KTA+LV+
Sbjct: 206 ASWYLAN-LENLEVIKLISQVIKDFASGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAA 264
Query: 213 SCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIIT 272
S K A S +V +E+GKNLGL++Q++DDILDFT ++ LGK + +DL G +T
Sbjct: 265 STKGAAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLT 324
Query: 273 APILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDS 332
AP++FA+E P+LR I S +++ +E + K GI+R E +
Sbjct: 325 APVIFALEREPRLREIIESEFCEAGSLEEAIEAVTKGGGIKRAQELAREKADDAIKNLQC 384
Query: 333 LPET 336
LP +
Sbjct: 385 LPRS 388
>UNIPROTKB|P31114 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0009234 "menaquinone biosynthetic process" evidence=IMP]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0030435
EMBL:AL009126 GenomeReviews:AL009126_GR EMBL:M80245
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0016765 KO:K00805 GO:GO:0009234 PIR:E69630
RefSeq:NP_390155.1 ProteinModelPortal:P31114 SMR:P31114
DNASU:939002 EnsemblBacteria:EBBACT00000001536 GeneID:939002
KEGG:bsu:BSU22740 PATRIC:18976359 GenoList:BSU22740 OMA:KLYRFGY
ProtClustDB:CLSK873092 BioCyc:BSUB:BSU22740-MONOMER
BioCyc:MetaCyc:MONOMER-13770 InterPro:IPR014119 TIGRFAMs:TIGR02748
Uniprot:P31114
Length = 348
Score = 190 (71.9 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 45/143 (31%), Positives = 77/143 (53%)
Query: 195 MECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGT 254
+ Y+++ KTA L++ SC+ A SG E++ + +G +G++YQ+IDDILDFT T
Sbjct: 188 LRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTST 247
Query: 255 SASLGKASLTDLRNGIITAPILFAMEEFPQLR---AFINSSSDNPANVDVILEYLGKSHG 311
LGK DL G +T P+L+A++ P L+ INS + ++ I+E + K+
Sbjct: 248 EEELGKPVGGDLLQGNVTLPVLYALKN-PALKNQLKLINSETTQE-QLEPIIEEIKKTDA 305
Query: 312 IQRTTEXXXXXXXXXXXXIDSLP 334
I+ + +++LP
Sbjct: 306 IEASMAVSEMYLQKAFQKLNTLP 328
Score = 128 (50.1 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 23/52 (44%), Positives = 38/52 (73%)
Query: 131 IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRAL 182
+A EMIH+ASL+HDDV+DDA+ RRG ++ + N++A+ GD +++ +L
Sbjct: 97 VAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSL 148
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 187 SLKHTEVIMECYMQKTYNKTAAL----VSNSCKAVAYLSGQRE 225
+++ + + E Y+QK + K L +S A+A G+R+
Sbjct: 305 AIEASMAVSEMYLQKAFQKLNTLPRGRARSSLAAIAKYIGKRK 347
>TIGR_CMR|BA_1535 [details] [associations]
symbol:BA_1535 "heptaprenyl diphosphate synthase component
II" species:198094 "Bacillus anthracis str. Ames" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 OMA:KLYRFGY ProtClustDB:CLSK873092
InterPro:IPR014119 TIGRFAMs:TIGR02748 RefSeq:NP_843986.1
RefSeq:YP_018158.1 ProteinModelPortal:Q81SV9 DNASU:1087064
EnsemblBacteria:EBBACT00000008063 EnsemblBacteria:EBBACT00000013944
GeneID:1087064 GeneID:2816030 KEGG:ban:BA_1535 KEGG:bar:GBAA_1535
PATRIC:18780664 BioCyc:BANT261594:GJ7F-1560-MONOMER Uniprot:Q81SV9
Length = 320
Score = 186 (70.5 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 195 MECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGT 254
+ Y+++ KTA L++ SC+ A +G + + F YG +G++YQ+IDDILDF T
Sbjct: 160 LRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVST 219
Query: 255 SASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDV--ILEYLGKSHGI 312
LGK + DL G IT P L+AME+ P L I S +N ++ I+E + S I
Sbjct: 220 EEKLGKPAGGDLLQGNITLPALYAMED-PILCKKIRSVHENTTADEMKEIIEAVKNSAAI 278
Query: 313 QR 314
+
Sbjct: 279 DK 280
Score = 126 (49.4 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 131 IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKH 190
+A E+IH+ASL+HDDV+D A RRG ++++ G+++A+ GD L +++L + +++
Sbjct: 69 VAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEI 128
Query: 191 TE 192
E
Sbjct: 129 PE 130
Score = 39 (18.8 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 178 ISRALVALASLKHTEVIMECYMQK 201
++ L+ +ASL H +VI ++++
Sbjct: 71 VALELIHMASLVHDDVIDAAFLRR 94
>UNIPROTKB|H0YEE6 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:AL390961 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HGNC:HGNC:17759 Ensembl:ENST00000491711 Uniprot:H0YEE6
Length = 158
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 45/105 (42%), Positives = 70/105 (66%)
Query: 177 LISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGK 236
L+ + L S ++ Y++KT+ KTA+L++NSCKAV+ L V +A++YGK
Sbjct: 41 LVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGK 100
Query: 237 NLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEE 281
N+G+A+QLIDD+LDFT S +GK + DL+ G+ T P+LFA ++
Sbjct: 101 NVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQ 145
>UNIPROTKB|F1NMS4 [details] [associations]
symbol:PDSS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0051290
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 OMA:QIGEAQE GO:GO:0050347
EMBL:AADN02002114 EMBL:AADN02002115 EMBL:AADN02002116
EMBL:AADN02002117 EMBL:AADN02002118 IPI:IPI00590994
Ensembl:ENSGALT00000024716 Uniprot:F1NMS4
Length = 359
Score = 202 (76.2 bits), Expect = 7.2e-20, Sum P(2) = 7.2e-20
Identities = 48/144 (33%), Positives = 87/144 (60%)
Query: 52 LVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNVCTPEL 111
L+ DELS I+M++R +V + P L +A G+ + + ++ V+LL++ A T EL
Sbjct: 33 LLSDELSNIAMQVRKLVGTKHPLLDTARGFVY-DSRNNLQMRGLVVLLISKAAGPSTAEL 91
Query: 112 SPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVM-GNKLA 170
S + ++ + Q+ +AEITE+IH A L+H +++ + + G L + GNK+A
Sbjct: 92 S---FQHNMVSGIYSSQRSLAEITELIHTAFLVHRGIVNIGELKSCDGPLKDMQFGNKMA 148
Query: 171 ILAGDLLISRALVALASLKHTEVI 194
+L+GD L++ A +LA L++T+V+
Sbjct: 149 VLSGDFLLANACTSLAQLQNTKVV 172
Score = 91 (37.1 bits), Expect = 7.2e-20, Sum P(2) = 7.2e-20
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 192 EVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDF 251
++ + + ++ + +AL++ SC+A L+ E+ +AF YGK++ ++++L D+ F
Sbjct: 201 DIGISTWKEQVFLSHSALLAKSCQAAMELAKHSAEMQDMAFRYGKHMSMSHKLHSDLQPF 260
Query: 252 TGTSAS 257
S+S
Sbjct: 261 VKESSS 266
>RGD|1359372 [details] [associations]
symbol:Pdss2 "prenyl (decaprenyl) diphosphate synthase, subunit
2" species:10116 "Rattus norvegicus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA;ISO] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA;ISO] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA;ISO] [GO:0050878 "regulation of body fluid
levels" evidence=IEA;ISO] [GO:0051290 "protein
heterotetramerization" evidence=IEA;ISO] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
RGD:1359372 GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0006744 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107
HOGENOM:HOG000294216 HOVERGEN:HBG058860 KO:K12505 OrthoDB:EOG44QT18
EMBL:BC085898 IPI:IPI00367901 RefSeq:NP_001014271.1
UniGene:Rn.20063 ProteinModelPortal:Q5U2R1 PRIDE:Q5U2R1
GeneID:365592 KEGG:rno:365592 UCSC:RGD:1359372 NextBio:687727
ArrayExpress:Q5U2R1 Genevestigator:Q5U2R1 Uniprot:Q5U2R1
Length = 401
Score = 184 (69.8 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 47/144 (32%), Positives = 83/144 (57%)
Query: 52 LVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNVCTPEL 111
L+ DELS ++M++R +V + P L +A G F + +L V+LL++ A T
Sbjct: 73 LLSDELSNVAMQVRKLVGTQHPLLTTARG-FVHDSRHNLQLRGLVVLLISKAAGPSTRNS 131
Query: 112 SPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSV-MGNKLA 170
S ++ + Q+ +AEITE+IH A L+H +++ ++ + G L + GNK+A
Sbjct: 132 SSQ--NYDMVSGIYSCQRNLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMKFGNKIA 189
Query: 171 ILAGDLLISRALVALASLKHTEVI 194
+L+GD L++ A LA L++T+V+
Sbjct: 190 VLSGDFLLANACNGLALLQNTKVV 213
Score = 95 (38.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 19/69 (27%), Positives = 39/69 (56%)
Query: 192 EVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDF 251
++ + + ++T+ AL++ SCKA L+ V +AF+YGK++ +++++ D+ F
Sbjct: 243 DIRISTWKEQTFLSHCALLAKSCKAAMELAKHDAAVQDMAFQYGKHMAMSHKINSDLQPF 302
Query: 252 TGTSASLGK 260
AS K
Sbjct: 303 IKDKASDSK 311
>UNIPROTKB|Q5U2R1 [details] [associations]
symbol:Pdss2 "Decaprenyl-diphosphate synthase subunit 2"
species:10116 "Rattus norvegicus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0050878 "regulation of body fluid levels"
evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00232 RGD:1359372 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0006744 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 CTD:57107 HOGENOM:HOG000294216 HOVERGEN:HBG058860
KO:K12505 OrthoDB:EOG44QT18 EMBL:BC085898 IPI:IPI00367901
RefSeq:NP_001014271.1 UniGene:Rn.20063 ProteinModelPortal:Q5U2R1
PRIDE:Q5U2R1 GeneID:365592 KEGG:rno:365592 UCSC:RGD:1359372
NextBio:687727 ArrayExpress:Q5U2R1 Genevestigator:Q5U2R1
Uniprot:Q5U2R1
Length = 401
Score = 184 (69.8 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 47/144 (32%), Positives = 83/144 (57%)
Query: 52 LVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNVCTPEL 111
L+ DELS ++M++R +V + P L +A G F + +L V+LL++ A T
Sbjct: 73 LLSDELSNVAMQVRKLVGTQHPLLTTARG-FVHDSRHNLQLRGLVVLLISKAAGPSTRNS 131
Query: 112 SPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSV-MGNKLA 170
S ++ + Q+ +AEITE+IH A L+H +++ ++ + G L + GNK+A
Sbjct: 132 SSQ--NYDMVSGIYSCQRNLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMKFGNKIA 189
Query: 171 ILAGDLLISRALVALASLKHTEVI 194
+L+GD L++ A LA L++T+V+
Sbjct: 190 VLSGDFLLANACNGLALLQNTKVV 213
Score = 95 (38.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 19/69 (27%), Positives = 39/69 (56%)
Query: 192 EVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDF 251
++ + + ++T+ AL++ SCKA L+ V +AF+YGK++ +++++ D+ F
Sbjct: 243 DIRISTWKEQTFLSHCALLAKSCKAAMELAKHDAAVQDMAFQYGKHMAMSHKINSDLQPF 302
Query: 252 TGTSASLGK 260
AS K
Sbjct: 303 IKDKASDSK 311
>UNIPROTKB|Q3IPL1 [details] [associations]
symbol:idsA3 "Geranylfarnesyl diphosphate synthase"
species:348780 "Natronomonas pharaonis DSM 2160" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 HOGENOM:HOG000009101 KO:K13787 GO:GO:0044687
EMBL:CR936257 RefSeq:YP_327492.1 ProteinModelPortal:Q3IPL1
STRING:Q3IPL1 PRIDE:Q3IPL1 GeneID:3702862 GenomeReviews:CR936257_GR
KEGG:nph:NP3696A OMA:DIMDNDD ProtClustDB:CLSK511327
BioCyc:NPHA348780:GJX0-1875-MONOMER Uniprot:Q3IPL1
Length = 341
Score = 141 (54.7 bits), Expect = 5.6e-17, Sum P(2) = 5.6e-17
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 51 SLVGDELSLISMRLRSMVVAEVPE-LASAAGYFFKEGVEGKKLCPTVILLMATALNVCTP 109
S + + +++ + + + PE L SA+ Y G GK+L PT++LL A +L P
Sbjct: 9 SAIAERREIVNEAVSEQLPVQKPERLYSASRYLLDAG--GKRLRPTILLLAAESLADVEP 66
Query: 110 ELSPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKL 169
LS + + A E+I +LIHDD++DD D RRG+ ++ +
Sbjct: 67 -LSADYRQFPSLPGDEVDVLSAAVSIEVIQSFTLIHDDIMDDDDLRRGVPAVHREYDLET 125
Query: 170 AILAGDLLISRA 181
AILAGD L S+A
Sbjct: 126 AILAGDTLYSKA 137
Score = 135 (52.6 bits), Expect = 5.6e-17, Sum P(2) = 5.6e-17
Identities = 39/145 (26%), Positives = 63/145 (43%)
Query: 191 TEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILD 250
++V E Y++ KTA L + + A L G +E YG ++G A+Q+ DD+LD
Sbjct: 179 SDVTTEEYLEMVEFKTAVLYAAAASIPAILLGSDDETVEALHGYGLDIGRAFQIQDDLLD 238
Query: 251 FTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSH 310
T S LGK +DL T L A ++ + + S + A ++ ++ L +
Sbjct: 239 LTAPSDELGKQRGSDLVENKRTVITLHARDQGIDVEGLV-SDDPSDAEIEAAVQTLEDAG 297
Query: 311 GIQRTTEXXXXXXXXXXXXIDSLPE 335
I E +D LPE
Sbjct: 298 SIDFAREMALDLVTSGKERLDVLPE 322
>UNIPROTKB|Q86YH6 [details] [associations]
symbol:PDSS2 "Decaprenyl-diphosphate synthase subunit 2"
species:9606 "Homo sapiens" [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IEA;IDA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
GO:GO:0005739 GO:GO:0005737 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0006744 GO:GO:0046982 Orphanet:139485
GO:GO:0051290 GO:GO:0050878 Orphanet:255249 eggNOG:COG0142
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AB210839 EMBL:AF254956 EMBL:AL121957 EMBL:AL590489
EMBL:AL355586 EMBL:AL591516 EMBL:BC029491 EMBL:BC039906
IPI:IPI00384708 IPI:IPI00643460 RefSeq:NP_065114.3
UniGene:Hs.486095 ProteinModelPortal:Q86YH6 SMR:Q86YH6
STRING:Q86YH6 PhosphoSite:Q86YH6 DMDM:73620006 PaxDb:Q86YH6
PRIDE:Q86YH6 Ensembl:ENST00000369031 Ensembl:ENST00000369037
GeneID:57107 KEGG:hsa:57107 UCSC:uc003prt.2 UCSC:uc003prv.3
CTD:57107 GeneCards:GC06M107473 HGNC:HGNC:23041 HPA:HPA029685
HPA:HPA029686 MIM:610564 MIM:614652 neXtProt:NX_Q86YH6
PharmGKB:PA134957167 HOGENOM:HOG000294216 HOVERGEN:HBG058860
InParanoid:Q86YH6 KO:K12505 OMA:QIGEAQE OrthoDB:EOG44QT18
PhylomeDB:Q86YH6 BioCyc:MetaCyc:HS15203-MONOMER GenomeRNAi:57107
NextBio:62953 ArrayExpress:Q86YH6 Bgee:Q86YH6 CleanEx:HS_PDSS2
Genevestigator:Q86YH6 GermOnline:ENSG00000164494 GO:GO:0050347
Uniprot:Q86YH6
Length = 399
Score = 178 (67.7 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 46/144 (31%), Positives = 84/144 (58%)
Query: 52 LVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNVCTPEL 111
L+ DELS I+M++R +V + P L +A G + +L V+LL++ A + +
Sbjct: 72 LLSDELSNIAMQVRKLVGTQHPLLTTARG-LVHDSWNSLQLRGLVVLLISKAAGPSS--V 128
Query: 112 SPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVM-GNKLA 170
+ + ++ + Q+ +AEITE+IH+A L+H +++ + + G L + GNK+A
Sbjct: 129 NTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQFGNKIA 188
Query: 171 ILAGDLLISRALVALASLKHTEVI 194
IL+GD L++ A LA L++T+V+
Sbjct: 189 ILSGDFLLANACNGLALLQNTKVV 212
Score = 93 (37.8 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 16/60 (26%), Positives = 37/60 (61%)
Query: 192 EVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDF 251
++ + + ++T+ AL++ SC+A L+ EV +AF+YGK++ +++++ D+ F
Sbjct: 241 DIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQNMAFQYGKHMAMSHKINSDVQPF 300
>TIGR_CMR|CBU_0382 [details] [associations]
symbol:CBU_0382 "octylprenyl diphosphate synthase-like
protein" species:227377 "Coxiella burnetii RSA 493" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
KO:K02523 HOGENOM:HOG000009102 OMA:SIKAMNV RefSeq:NP_819421.1
ProteinModelPortal:Q83EE2 GeneID:1208265 KEGG:cbu:CBU_0382
PATRIC:17929459 ProtClustDB:CLSK914032
BioCyc:CBUR227377:GJ7S-383-MONOMER Uniprot:Q83EE2
Length = 332
Score = 137 (53.3 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 41/155 (26%), Positives = 74/155 (47%)
Query: 198 YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSAS 257
Y + KTA L S + + A ++ + E +G +LG+AYQ+IDD+LD++ +++
Sbjct: 173 YYEVIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGFHLGMAYQIIDDLLDYSKDASA 232
Query: 258 LGKASLTDLRNGIITAPILFAMEEFPQLRA-FINSSSDNPANVDV--ILEYLGKSHGIQR 314
L K DL G T P+++A ++ +A I + N D+ I++ + ++ +
Sbjct: 233 LDKNVGDDLAEGKATLPLIYAKQQAQPAQAEHIREAIKNGDLDDLQSIMKLMDETRAREY 292
Query: 315 TTEXXXXXXXXXXXXIDSLPETHDVDATNARTALV 349
T + + LP + DA NA T V
Sbjct: 293 TQQCALKQAEKAHTYLQQLPPSPYRDALNALTQFV 327
Score = 135 (52.6 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 37/106 (34%), Positives = 57/106 (53%)
Query: 89 GKKLCPTVILLMATALNVCTPELSPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDV 148
GK+L P V+LL A A C E D+ ++ +A + E IH A+L+HDDV
Sbjct: 53 GKRLRPLVVLLTARA---CGYEQ-----------DVEHQE--LATVIEFIHTATLLHDDV 96
Query: 149 LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVI 194
+D + RRG + +++ GN ++L GD L SRA LA + ++
Sbjct: 97 VDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQILARRSNVPIM 142
>UNIPROTKB|I3LJ49 [details] [associations]
symbol:I3LJ49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GeneTree:ENSGT00530000063378 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 Ensembl:ENSSSCT00000027318 OMA:NNCISEQ
Uniprot:I3LJ49
Length = 145
Score = 205 (77.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 50/151 (33%), Positives = 82/151 (54%)
Query: 212 NSC--KAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNG 269
N+C + V+ L V +A++YGKN+G+A+QLIDD+LDFT S +GK
Sbjct: 9 NNCISEQVSVLGCPDPAVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKX-------- 60
Query: 270 IITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXX 329
+ T P+LFA ++FP++ A I P +VD +Y+ +S G+Q+TT
Sbjct: 61 LATGPVLFACQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQRYCHEAIRE 120
Query: 330 IDSLPETHDVDATNARTALVHITQKIITRNK 360
I L + + R AL+ +++ ++TR+K
Sbjct: 121 ISKLRPSPE------REALIQLSEIVLTRDK 145
>UNIPROTKB|J9NVK1 [details] [associations]
symbol:PDSS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GeneTree:ENSGT00530000063378
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107
KO:K12505 OMA:QIGEAQE EMBL:AAEX03008588 EMBL:AAEX03008589
EMBL:AAEX03008590 RefSeq:XP_539071.2 Ensembl:ENSCAFT00000043165
GeneID:481950 KEGG:cfa:481950 Uniprot:J9NVK1
Length = 400
Score = 175 (66.7 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 45/144 (31%), Positives = 84/144 (58%)
Query: 52 LVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNVCTPEL 111
L+ DELS I++++R +V + P L +A+G + +L V+LL++ A + +
Sbjct: 72 LLSDELSNIALQVRKLVGTQHPLLTTASG-LVHDSRHNLQLRGLVVLLISKAAGPSS--M 128
Query: 112 SPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVM-GNKLA 170
+ + ++ + Q+ +AEITE+IH A L+H +++ + + G L + GNK+A
Sbjct: 129 NASCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKIA 188
Query: 171 ILAGDLLISRALVALASLKHTEVI 194
IL+GD L++ A LA L++T+V+
Sbjct: 189 ILSGDFLLANACNGLALLQNTKVV 212
Score = 89 (36.4 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 18/62 (29%), Positives = 38/62 (61%)
Query: 191 TEVI-MECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDIL 249
TE I + + ++T+ AL++ SC+A L+ +V +AF+YGK++ +++++ D+
Sbjct: 240 TEDIGISTWKEQTFLSHGALLAKSCQAAMELAKHDADVQDMAFQYGKHMAMSHKINSDLQ 299
Query: 250 DF 251
F
Sbjct: 300 PF 301
>UNIPROTKB|Q3AAM7 [details] [associations]
symbol:CHY_1988 "Geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 154 (59.3 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 43/118 (36%), Positives = 68/118 (57%)
Query: 168 KLAILAG-DLLISRALVALASL---KHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQ 223
+LA+ +G + LI+ +V L+S K EV++ ++ NKTA L+ S A L+G
Sbjct: 144 ELAVASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHL----NKTARLIRYSLIAGGILAGA 199
Query: 224 REEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEE 281
EE +YG++LGLA+Q++DD+LD G +GK +D +N +T LF +EE
Sbjct: 200 TEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVSLFGIEE 257
Score = 104 (41.7 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 136 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRA 181
E +H SLIHDD+ +D+ D RRG + V G +AILAGD L+++A
Sbjct: 74 ECLHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKA 121
>TIGR_CMR|CHY_1988 [details] [associations]
symbol:CHY_1988 "geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 154 (59.3 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 43/118 (36%), Positives = 68/118 (57%)
Query: 168 KLAILAG-DLLISRALVALASL---KHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQ 223
+LA+ +G + LI+ +V L+S K EV++ ++ NKTA L+ S A L+G
Sbjct: 144 ELAVASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHL----NKTARLIRYSLIAGGILAGA 199
Query: 224 REEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEE 281
EE +YG++LGLA+Q++DD+LD G +GK +D +N +T LF +EE
Sbjct: 200 TEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVSLFGIEE 257
Score = 104 (41.7 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 136 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRA 181
E +H SLIHDD+ +D+ D RRG + V G +AILAGD L+++A
Sbjct: 74 ECLHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKA 121
>UNIPROTKB|A6QR05 [details] [associations]
symbol:PDSS2 "PDSS2 protein" species:9913 "Bos taurus"
[GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0051290 GO:GO:0050878
eggNOG:COG0142 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107
HOGENOM:HOG000294216 HOVERGEN:HBG058860 KO:K12505 OMA:QIGEAQE
OrthoDB:EOG44QT18 GO:GO:0050347 EMBL:DAAA02025951 EMBL:DAAA02025952
EMBL:DAAA02025953 EMBL:DAAA02025954 EMBL:BC150063 IPI:IPI00704753
RefSeq:NP_001093855.1 UniGene:Bt.18477 STRING:A6QR05
Ensembl:ENSBTAT00000029142 GeneID:521115 KEGG:bta:521115
InParanoid:A6QR05 NextBio:20873244 Uniprot:A6QR05
Length = 395
Score = 165 (63.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 44/144 (30%), Positives = 80/144 (55%)
Query: 52 LVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNVCTPEL 111
L+ DEL I+M++R +V + P L + G + +L V+LL++ A +
Sbjct: 67 LLSDELCNIAMQVRKLVGTQHPLLTTVRG-LIHDRQNNLQLRGLVVLLISKAAG--PNSV 123
Query: 112 SPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVM-GNKLA 170
+ + ++ + Q+ +AEITE+IH A L+H +++ + + G L + GNK+A
Sbjct: 124 NASCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKIA 183
Query: 171 ILAGDLLISRALVALASLKHTEVI 194
IL+GD L++ A LA L++T+V+
Sbjct: 184 ILSGDFLLANACNGLALLQNTKVV 207
Score = 97 (39.2 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 17/60 (28%), Positives = 38/60 (63%)
Query: 192 EVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDF 251
++ + + ++T+ AL++ SC+A L+ EV +AF+YGK++ +++++ D+L F
Sbjct: 237 DIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQDMAFQYGKHMAMSHKINSDLLPF 296
>TIGR_CMR|NSE_0238 [details] [associations]
symbol:NSE_0238 "polyprenyl synthetase family protein"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_506132.1 ProteinModelPortal:Q2GEG4 STRING:Q2GEG4
GeneID:3932073 KEGG:nse:NSE_0238 PATRIC:22680571 OMA:MIYYKTA
ProtClustDB:CLSK2527623 BioCyc:NSEN222891:GHFU-268-MONOMER
Uniprot:Q2GEG4
Length = 321
Score = 137 (53.3 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 26/64 (40%), Positives = 42/64 (65%)
Query: 132 AEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHT 191
A E+IH A+L+HDDV+D+ RRG ++ S+ GNK+++L GD L+S A + K+
Sbjct: 72 AATIELIHNATLMHDDVVDENSIRRGKPNIKSIHGNKISVLTGDFLLSVAFEIILECKNL 131
Query: 192 EVIM 195
V++
Sbjct: 132 SVVL 135
Score = 124 (48.7 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 31/91 (34%), Positives = 50/91 (54%)
Query: 192 EVIMEC-YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILD 250
E++ E Y++ KTA L S + + A L+G++E V L E G +G+A+Q+ DD+LD
Sbjct: 157 EIVSESEYLEVIARKTAVLFSAAAEIAAILTGKQEYVVILR-EIGFLIGMAFQITDDVLD 215
Query: 251 FTGTSASLGKASLTDLRNGIITAPILFAMEE 281
+ G +GK+ D R T P + A +
Sbjct: 216 Y-GEPQEVGKSVGNDFRECKFTLPCVIAYRD 245
>FB|FBgn0037044 [details] [associations]
symbol:CG10585 species:7227 "Drosophila melanogaster"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] EMBL:AE014296 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 eggNOG:COG0142 GeneTree:ENSGT00530000063378
GO:GO:0000010 InterPro:IPR017446 PANTHER:PTHR12001 KO:K12505
EMBL:AY051597 RefSeq:NP_649277.1 UniGene:Dm.1022 SMR:Q9VP87
MINT:MINT-762100 EnsemblMetazoa:FBtr0078287 GeneID:40323
KEGG:dme:Dmel_CG10585 UCSC:CG10585-RA FlyBase:FBgn0037044
InParanoid:Q9VP87 OMA:IILAMQD OrthoDB:EOG4CFXQJ GenomeRNAi:40323
NextBio:818180 Uniprot:Q9VP87
Length = 448
Score = 144 (55.7 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 40/147 (27%), Positives = 80/147 (54%)
Query: 52 LVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNVCTPEL 111
L+ DE++ +++ LR +V + P L A + G + ++LL++ A P +
Sbjct: 90 LLSDEIANVALHLRKLVGSAHP-LMKTAKHLLYNGKNTMQAWGLIVLLVSKAAGHA-PSV 147
Query: 112 SPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLD-DADTRRG--IGSLSSV-MGN 167
P+V + + Q+ +AE+TEMI ++ L+H+ V++ + T+ G + + + GN
Sbjct: 148 -PDVEQDKSA-GVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYDDMSFGN 205
Query: 168 KLAILAGDLLISRALVALASLKHTEVI 194
K+ +L GD L+ + LA+L++ EV+
Sbjct: 206 KIGLLTGDYLLGHSSAELANLRNQEVV 232
Score = 119 (46.9 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 39/146 (26%), Positives = 67/146 (45%)
Query: 208 ALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLR 267
+L+ SC+A L+GQ EE+ A+ +GK+L LA+Q D F L D+
Sbjct: 308 SLLGKSCQASLKLAGQSEELQRHAYRFGKHLALAWQACLDAEPFQCPQLPL------DVT 361
Query: 268 NGIITAPILFAMEEFPQLRAFINSSSDNPANVDV--ILEYLGKSHGIQRTTEXXXXXXXX 325
+++AP+LF +E P + + + + + N+D I + + + +T E
Sbjct: 362 FSLVSAPVLFHLEHDPGMYSQLEAGKQSVDNIDYDKIHKAILAGPALAKTKELQRKHTAA 421
Query: 326 XXXXIDSLPETHDVDATNARTALVHI 351
+ P AT+AR AL +I
Sbjct: 422 ALAVLQHFP------ATDARQALENI 441
>MGI|MGI:1918615 [details] [associations]
symbol:Pdss2 "prenyl (solanesyl) diphosphate synthase,
subunit 2" species:10090 "Mus musculus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISO;IDA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISO;IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO;IDA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IDA]
[GO:0050878 "regulation of body fluid levels" evidence=IMP]
[GO:0051290 "protein heterotetramerization" evidence=IPI]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 MGI:MGI:1918615 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0006744
GO:GO:0046982 GO:GO:0051290 GO:GO:0050878 eggNOG:COG0142
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107 HOGENOM:HOG000294216
HOVERGEN:HBG058860 KO:K12505 OMA:QIGEAQE OrthoDB:EOG44QT18
EMBL:AB210840 EMBL:AK017329 EMBL:AK140091 EMBL:BC147693
EMBL:BC147694 EMBL:BC147752 EMBL:BC147753 IPI:IPI00316693
IPI:IPI00659599 IPI:IPI00672429 RefSeq:NP_001161761.1
RefSeq:NP_082048.2 UniGene:Mm.490430 ProteinModelPortal:Q33DR3
SMR:Q33DR3 STRING:Q33DR3 PhosphoSite:Q33DR3 PRIDE:Q33DR3
Ensembl:ENSMUST00000095725 Ensembl:ENSMUST00000159139 GeneID:71365
KEGG:mmu:71365 UCSC:uc007ezh.2 UCSC:uc007ezi.2 UCSC:uc011xdk.1
InParanoid:B2RWA7 ChiTaRS:PDSS2 NextBio:333637 Bgee:Q33DR3
Genevestigator:Q33DR3 GermOnline:ENSMUSG00000038240 Uniprot:Q33DR3
Length = 401
Score = 167 (63.8 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 46/144 (31%), Positives = 80/144 (55%)
Query: 52 LVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNVCTPEL 111
L+ DELS I+M++R +V P L +A + +L V+LL++ A T
Sbjct: 73 LLSDELSNIAMQVRKLVGTGHPLLTTARA-LVHDSRHNLQLRGLVVLLISKAAGPSTRNA 131
Query: 112 SPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVM-GNKLA 170
+ ++ + Q+ +AEITE+IH A L+H +++ ++ + G L + GNK+A
Sbjct: 132 ACQ--NYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQFGNKIA 189
Query: 171 ILAGDLLISRALVALASLKHTEVI 194
IL+GD L++ A LA L++T+V+
Sbjct: 190 ILSGDFLLANACNGLALLQNTKVV 213
Score = 88 (36.0 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 18/69 (26%), Positives = 39/69 (56%)
Query: 192 EVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDF 251
++ + + ++T+ AL++ SC+A L+ V +AF+YGK++ +++++ D+ F
Sbjct: 243 DIGISTWKEQTFLSHCALLAKSCQAAMELAKHDAAVQDMAFQYGKHMAMSHKINADLQPF 302
Query: 252 TGTSASLGK 260
AS K
Sbjct: 303 IKDKASDSK 311
>UNIPROTKB|Q81M53 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:1392
"Bacillus anthracis" [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 130 (50.8 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 40/109 (36%), Positives = 54/109 (49%)
Query: 93 CPTVIL-LMATALNVCTPELSPNVLGNTL-ILDLRRRQQCIAEIT-EMIHVASLIHDDV- 148
CP V+ MA +L L P +L TL D R A EMIH SL+HDD+
Sbjct: 29 CPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDDLP 88
Query: 149 -LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVIME 196
+DD D RRG + V G +A+LAGD L++ A + + E+ E
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAE 137
Score = 118 (46.6 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 36/110 (32%), Positives = 54/110 (49%)
Query: 198 YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSAS 257
Y+ K +KT L+ + A + LS EE E+ K +GLA+Q+ DDILD GT
Sbjct: 177 YIHK--HKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEE 234
Query: 258 LGKASLTDLRNGIITAPILFAMEEFPQ-LRAFINSSSDNPANVDVILEYL 306
+GK +D+ N T LF ++ L I + D ++ + EYL
Sbjct: 235 IGKPIGSDVSNEKSTYTTLFTVDRAKDILDETIAKAKDAIGSLQLQDEYL 284
>TIGR_CMR|BA_4402 [details] [associations]
symbol:BA_4402 "geranyltranstransferase" species:198094
"Bacillus anthracis str. Ames" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 130 (50.8 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 40/109 (36%), Positives = 54/109 (49%)
Query: 93 CPTVIL-LMATALNVCTPELSPNVLGNTL-ILDLRRRQQCIAEIT-EMIHVASLIHDDV- 148
CP V+ MA +L L P +L TL D R A EMIH SL+HDD+
Sbjct: 29 CPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDDLP 88
Query: 149 -LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVIME 196
+DD D RRG + V G +A+LAGD L++ A + + E+ E
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAE 137
Score = 118 (46.6 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 36/110 (32%), Positives = 54/110 (49%)
Query: 198 YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSAS 257
Y+ K +KT L+ + A + LS EE E+ K +GLA+Q+ DDILD GT
Sbjct: 177 YIHK--HKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEE 234
Query: 258 LGKASLTDLRNGIITAPILFAMEEFPQ-LRAFINSSSDNPANVDVILEYL 306
+GK +D+ N T LF ++ L I + D ++ + EYL
Sbjct: 235 IGKPIGSDVSNEKSTYTTLFTVDRAKDILDETIAKAKDAIGSLQLQDEYL 284
>UNIPROTKB|P55785 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:1422 "Geobacillus stearothermophilus" [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 InterPro:IPR014119 TIGRFAMs:TIGR02748 EMBL:D49976
ProteinModelPortal:P55785 Uniprot:P55785
Length = 320
Score = 198 (74.8 bits), Expect = 9.3e-14, P = 9.3e-14
Identities = 75/304 (24%), Positives = 145/304 (47%)
Query: 50 FSLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMAT------- 102
+S + D+L+ + L V +E L AA + + G GK++ P +LL A
Sbjct: 7 YSFLSDDLAAVEEELERAVQSEYGPLGEAALHLLQAG--GKRIRPVFVLLAARFGQYDLE 64
Query: 103 -ALNVCTP-EL--SPNVLGNTLI--LDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRR 156
+V EL +++ + +I DLRR + I + + ++ D L R
Sbjct: 65 RMKHVAVALELIHMASLVHDDVIDDADLRRGRPTIK--AKWSNRFAMYTGDYL----FAR 118
Query: 157 GIGSLSSVMGNKLA--ILAGDLL-ISRALVALASLKHT-EVIMECYMQKTYNKTAALVSN 212
+ ++ +GN A +LA ++ + R + K+ + + Y+++ KTA L++
Sbjct: 119 SLERMAE-LGNPRAHQVLAKTIVEVCRGEIEQIKDKYRFDQPLRTYLRRIRRKTALLIAA 177
Query: 213 SCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIIT 272
SC+ A +G E + + +G +G+++Q+ DDILDFTGT LGK + +DL G +T
Sbjct: 178 SCQLGALAAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLLQGNVT 237
Query: 273 APILFAMEEFPQLRAFINS--SSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXI 330
P+L+A+ + +++A I + + A + ++ + ++ I+R+ +
Sbjct: 238 LPVLYALSD-ERVKAAIAAVGPETDVAEMAAVISAIKRTDAIERSYALSDRYLDKALHLL 296
Query: 331 DSLP 334
D LP
Sbjct: 297 DGLP 300
>GENEDB_PFALCIPARUM|PFB0130w [details] [associations]
symbol:PFB0130w "polyprenyl synthetase,
putative" species:5833 "Plasmodium falciparum" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE001362
GenomeReviews:AE001362_GR OMA:RASSIFA GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004659 PIR:F71622
RefSeq:XP_001349541.1 ProteinModelPortal:O96130
EnsemblProtists:PFB0130w:mRNA GeneID:812623 KEGG:pfa:PFB0130w
EuPathDB:PlasmoDB:PF3D7_0202700 HOGENOM:HOG000284224
ProtClustDB:CLSZ2432854 Uniprot:O96130
Length = 538
Score = 200 (75.5 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 67/259 (25%), Positives = 122/259 (47%)
Query: 114 NVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILA 173
++L + +I D +R+ IA + + S++ D L + G+ S + + +
Sbjct: 280 SLLHDDVIDDSNKRRGVIALHKKFGNKISILSGDYLLARASSIFAGTGSPKICRSFSYVV 339
Query: 174 GDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFE 233
L+ L + E ++ Y+ K+Y+KTA+L S+ +A LS + + + L F
Sbjct: 340 ESLIKGEFLQRNLKFNNVEEALKMYLIKSYHKTASLFSHLFACIAILSFKNDTIIQLCFN 399
Query: 234 YGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQ-LRAFINSS 292
G ++G+A+QL DD LD+ + K L DL+N I TAP+LF+ PQ + IN +
Sbjct: 400 LGLHIGMAFQLYDDYLDYK-IDDNTNKPILNDLKNNIKTAPLLFSYNYNPQVILQLINKN 458
Query: 293 SDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSL------PET------HDVD 340
S +++ IL Y+ S+ +++ + SL P T HD D
Sbjct: 459 SYTNNDIENILYYIQHSNSMKKNELCSLLHIKKASDILYSLISHCNKPSTNKNNTKHD-D 517
Query: 341 ATNARTALVHITQKIITRN 359
+ AL+++ +++RN
Sbjct: 518 IKQSSEALINLILNVLSRN 536
Score = 148 (57.2 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 28/54 (51%), Positives = 42/54 (77%)
Query: 129 QC-IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRA 181
QC I +E+IH+ SL+HDDV+DD++ RRG+ +L GNK++IL+GD L++RA
Sbjct: 266 QCKIIAASEIIHMGSLLHDDVIDDSNKRRGVIALHKKFGNKISILSGDYLLARA 319
Score = 39 (18.8 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 10/65 (15%), Positives = 30/65 (46%)
Query: 41 NENKKHLDPFSLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLM 100
N+ + ++DP++L ++ I + +++ + Y + +GK+ + +L+
Sbjct: 146 NKERTNIDPYTLCESKIKNIDEYIYNIIKTNYKNIDEFITYIYL--YKGKRFRVILSILL 203
Query: 101 ATALN 105
L+
Sbjct: 204 KNILH 208
>UNIPROTKB|O96130 [details] [associations]
symbol:OPP "Octaprenyl pyrophosphate synthase"
species:36329 "Plasmodium falciparum 3D7" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE001362
GenomeReviews:AE001362_GR OMA:RASSIFA GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004659 PIR:F71622
RefSeq:XP_001349541.1 ProteinModelPortal:O96130
EnsemblProtists:PFB0130w:mRNA GeneID:812623 KEGG:pfa:PFB0130w
EuPathDB:PlasmoDB:PF3D7_0202700 HOGENOM:HOG000284224
ProtClustDB:CLSZ2432854 Uniprot:O96130
Length = 538
Score = 200 (75.5 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 67/259 (25%), Positives = 122/259 (47%)
Query: 114 NVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILA 173
++L + +I D +R+ IA + + S++ D L + G+ S + + +
Sbjct: 280 SLLHDDVIDDSNKRRGVIALHKKFGNKISILSGDYLLARASSIFAGTGSPKICRSFSYVV 339
Query: 174 GDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFE 233
L+ L + E ++ Y+ K+Y+KTA+L S+ +A LS + + + L F
Sbjct: 340 ESLIKGEFLQRNLKFNNVEEALKMYLIKSYHKTASLFSHLFACIAILSFKNDTIIQLCFN 399
Query: 234 YGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQ-LRAFINSS 292
G ++G+A+QL DD LD+ + K L DL+N I TAP+LF+ PQ + IN +
Sbjct: 400 LGLHIGMAFQLYDDYLDYK-IDDNTNKPILNDLKNNIKTAPLLFSYNYNPQVILQLINKN 458
Query: 293 SDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSL------PET------HDVD 340
S +++ IL Y+ S+ +++ + SL P T HD D
Sbjct: 459 SYTNNDIENILYYIQHSNSMKKNELCSLLHIKKASDILYSLISHCNKPSTNKNNTKHD-D 517
Query: 341 ATNARTALVHITQKIITRN 359
+ AL+++ +++RN
Sbjct: 518 IKQSSEALINLILNVLSRN 536
Score = 148 (57.2 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 28/54 (51%), Positives = 42/54 (77%)
Query: 129 QC-IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRA 181
QC I +E+IH+ SL+HDDV+DD++ RRG+ +L GNK++IL+GD L++RA
Sbjct: 266 QCKIIAASEIIHMGSLLHDDVIDDSNKRRGVIALHKKFGNKISILSGDYLLARA 319
Score = 39 (18.8 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 10/65 (15%), Positives = 30/65 (46%)
Query: 41 NENKKHLDPFSLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLM 100
N+ + ++DP++L ++ I + +++ + Y + +GK+ + +L+
Sbjct: 146 NKERTNIDPYTLCESKIKNIDEYIYNIIKTNYKNIDEFITYIYL--YKGKRFRVILSILL 203
Query: 101 ATALN 105
L+
Sbjct: 204 KNILH 208
>UNIPROTKB|Q9UWR6 [details] [associations]
symbol:fgs "Geranylfarnesyl diphosphate synthase"
species:56636 "Aeropyrum pernix" [GO:0004659 "prenyltransferase
activity" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004659 EMBL:AB025791
ProteinModelPortal:Q9UWR6 BioCyc:MetaCyc:MONOMER-15678
BRENDA:2.5.1.B1 GO:GO:0044687 Uniprot:Q9UWR6
Length = 318
Score = 119 (46.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 198 YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSAS 257
Y+ KT AL+ + + A +G E+ + E G N G+A+Q+ DDIL G
Sbjct: 159 YLNMVRLKTGALIEAAARIGAVAAGAGSEIEKMMGEVGMNAGIAFQIRDDILGVIGDPKV 218
Query: 258 LGKASLTDLRNGIITAPILFAMEE 281
GK DLR G T +++A+++
Sbjct: 219 TGKPVYNDLRRGKKTLLVIYAVKK 242
Score = 117 (46.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 39/112 (34%), Positives = 55/112 (49%)
Query: 75 LASAAGYFFKEGVEGKKLCPTVILLMATALNVCTPELSPNVLGNTLILDLRRRQQCIAEI 134
L+ A+ + K G GK+L P + LL A +LG L+ R +A
Sbjct: 18 LSGASLHLIKAG--GKRLRPLITLLTA------------RMLGG---LEAEARAIPLAAS 60
Query: 135 TEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALA 186
E H SLIHDD++D + RRG+ + V G+ AILAGD L + A +A
Sbjct: 61 IETAHTFSLIHDDIMDRDEVRRGVPTTHVVYGDDWAILAGDTLHAAAFKMIA 112
>TIGR_CMR|DET_0389 [details] [associations]
symbol:DET_0389 "heptaprenyl diphosphate synthase
component II" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 OMA:EFIVERK
RefSeq:YP_181134.1 ProteinModelPortal:Q3Z9G5 STRING:Q3Z9G5
GeneID:3230282 KEGG:det:DET0389 PATRIC:21607847
ProtClustDB:CLSK837510 BioCyc:DETH243164:GJNF-389-MONOMER
Uniprot:Q3Z9G5
Length = 324
Score = 189 (71.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 84/328 (25%), Positives = 138/328 (42%)
Query: 53 VGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNVCTPELS 112
V DE L+S + PE+A Y V GK L P + +L A ++
Sbjct: 18 VEDEFKLVSESRKQ----SFPEMAEMLDYIL---VGGKVLRPALSMLSAMCFGTGIKKVL 70
Query: 113 PNVLGN------TLI-------LDLRRRQQCIAEITEMIHVASLIHD-------DVLDDA 152
P + TL+ D RR ++ + + + A L+ D +V +
Sbjct: 71 PLATSSEMLHIATLVHDDAIDKADTRRSRRTVNSVWGL-EKAILLGDFLFAHAAEVAAET 129
Query: 153 DTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSN 212
D R + ++ L I+A L A AS + + E Y+++ KTAAL
Sbjct: 130 DNMR----IVTLFAQTLQIIASGELKQ----AYASF-NPDQSYENYLERISGKTAALFVM 180
Query: 213 SCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIIT 272
+ K A L+ + YG NLGL++Q++DDILDF G + +GK +DL NG +T
Sbjct: 181 ATKGGAILADASPSDEEIMRSYGYNLGLSFQIVDDILDFVGNAKDMGKPVGSDLNNGTVT 240
Query: 273 APILFAMEEFPQLRAFIN--SSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXI 330
P L M+ +P+ + ++D A+V +E + S I + + +
Sbjct: 241 LPALLLMDRYPENNPIKDMLGATDRSAHVARAVEMINSSDIIDLSYKEAKRYADLACQDL 300
Query: 331 DSLPETHDVDATNARTALVHITQKIITR 358
LP+T AR +L + + I+ R
Sbjct: 301 SKLPKTA------ARESLYQLAEFIVER 322
>UNIPROTKB|I3LGK0 [details] [associations]
symbol:PDSS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0051290 GO:GO:0050878
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
Ensembl:ENSSSCT00000024393 OMA:DIVELMS Uniprot:I3LGK0
Length = 241
Score = 132 (51.5 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 28/68 (41%), Positives = 46/68 (67%)
Query: 128 QQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVM-GNKLAILAGDLLISRALVALA 186
Q+ +AEITE+IH A L+H +++ + + G L + GNK+AIL+GD L++ A LA
Sbjct: 47 QRSLAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLA 106
Query: 187 SLKHTEVI 194
L++T+V+
Sbjct: 107 LLQNTKVV 114
Score = 93 (37.8 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 24/89 (26%), Positives = 48/89 (53%)
Query: 192 EVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDF 251
++ + + ++T+ AL++ SC+A L+ EV +AF+YGK++ +++++ D+ F
Sbjct: 144 DIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQDMAFQYGKHMAMSHKINSDLQPF 203
Query: 252 TGTSASLGKASLTDLRNGIITAPILFAME 280
S SLT N +AP++ E
Sbjct: 204 IKEKTS---DSLTFNLN---SAPVVLHQE 226
>TIGR_CMR|GSU_1317 [details] [associations]
symbol:GSU_1317 "octaprenyl-diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 RefSeq:NP_952370.1
ProteinModelPortal:Q74DJ9 GeneID:2686096 KEGG:gsu:GSU1317
PATRIC:22025411 OMA:FNKPVLE ProtClustDB:CLSK828295
BioCyc:GSUL243231:GH27-1296-MONOMER Uniprot:Q74DJ9
Length = 322
Score = 185 (70.2 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 81/333 (24%), Positives = 144/333 (43%)
Query: 51 SLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNVCTPE 110
SLVGD+L + ++ R + ++V + Y G GK++ P ++LL A
Sbjct: 6 SLVGDDLKNVELQFRKDLESDVYLIRKVGEYVLASG--GKRIRPMLLLLSAKLCGYQGDR 63
Query: 111 LSP--NVLG----NTLILD-------LRRRQQCIAEITEMIHVASLIHDDVLDDADTRRG 157
P +V+ TL+ D LRR E+ + AS++ D L
Sbjct: 64 HVPLASVIEFIHTATLLHDDVVDNATLRRGNASANEVWG--NEASVLVGDFLFSKSFSLM 121
Query: 158 I--GSLS--SVMGNKLAILA-GDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSN 212
+ G L V+ I+A G++L L+ + L+ T+ E Y++ +KTA L+S
Sbjct: 122 VEAGDLRILKVISGATTIIAEGEVL---QLLCTSDLEMTQ---ERYIEVVKSKTAVLLSA 175
Query: 213 SCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIIT 272
+C+A A L E ++G +LG+A+QL+DD LD+T + GK DL G IT
Sbjct: 176 ACEAGAILGTSSAEQQEALRDFGMDLGIAFQLMDDTLDYTASEEQFGKEIGHDLEEGKIT 235
Query: 273 APILFAM-----EEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXX 327
P++ + EE + A + P + + + + K GI+ T
Sbjct: 236 LPLIHTLMKCSDEERETIAAVVEKEILEPGDFESVFTLVHKYGGIEYTVSVANEYIARCK 295
Query: 328 XXIDSLPETHDVDATNARTALVHITQKIITRNK 360
+ + ++ + + AL+ + ++ R +
Sbjct: 296 AHLGAFVDSQE------KAALIELADYVVNRKR 322
>UNIPROTKB|Q3ACT5 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component II"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 184 (69.8 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 73/276 (26%), Positives = 122/276 (44%)
Query: 50 FSLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNVCTP 109
F LV ++L I L V L A + K G GK+L P LL A +
Sbjct: 12 FELVKEDLRKIEQELIKEVSERNEFLHDPAMHLLKAG--GKRLRPAFALLAAKLGDYDFE 69
Query: 110 ELSPNVLGNTLI----------LDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIG 159
++ P + LI +D ++ + + IH + D + +
Sbjct: 70 KVKPLAVALELIHMATLVHDDVVDNSMLRRGLPTVKANWGNKMSIH---IGDRIFAKSLL 126
Query: 160 SLSSVMGNKLAILAGDLLISRALVALASL---KHTEVIMECYMQKTYNKTAALVSNSCKA 216
+ S N +A + ++ + + L K+ ++ Y+ K KTA L+S SC+
Sbjct: 127 LIDSCKNNYVAKVLAEVSVKMTTGEIQQLNGAKNISTSIKDYLIKIKRKTALLLSASCEL 186
Query: 217 VAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPIL 276
++ V +YG +G+A+Q+IDDILDFT LGK +DLR G+IT P+L
Sbjct: 187 GGVMANVSPRVVNALKQYGLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVL 246
Query: 277 FAM--EEFPQLRAFINSSSDNPANVDVILE---YLG 307
A+ ++ +L + + N AN++ I++ YLG
Sbjct: 247 LALKRDKKHELWRELQNLPQNNANIEQIIKEIKYLG 282
>TIGR_CMR|CHY_1206 [details] [associations]
symbol:CHY_1206 "heptaprenyl diphosphate synthase
component II" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 184 (69.8 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 73/276 (26%), Positives = 122/276 (44%)
Query: 50 FSLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNVCTP 109
F LV ++L I L V L A + K G GK+L P LL A +
Sbjct: 12 FELVKEDLRKIEQELIKEVSERNEFLHDPAMHLLKAG--GKRLRPAFALLAAKLGDYDFE 69
Query: 110 ELSPNVLGNTLI----------LDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIG 159
++ P + LI +D ++ + + IH + D + +
Sbjct: 70 KVKPLAVALELIHMATLVHDDVVDNSMLRRGLPTVKANWGNKMSIH---IGDRIFAKSLL 126
Query: 160 SLSSVMGNKLAILAGDLLISRALVALASL---KHTEVIMECYMQKTYNKTAALVSNSCKA 216
+ S N +A + ++ + + L K+ ++ Y+ K KTA L+S SC+
Sbjct: 127 LIDSCKNNYVAKVLAEVSVKMTTGEIQQLNGAKNISTSIKDYLIKIKRKTALLLSASCEL 186
Query: 217 VAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPIL 276
++ V +YG +G+A+Q+IDDILDFT LGK +DLR G+IT P+L
Sbjct: 187 GGVMANVSPRVVNALKQYGLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVL 246
Query: 277 FAM--EEFPQLRAFINSSSDNPANVDVILE---YLG 307
A+ ++ +L + + N AN++ I++ YLG
Sbjct: 247 LALKRDKKHELWRELQNLPQNNANIEQIIKEIKYLG 282
>TIGR_CMR|CJE_0645 [details] [associations]
symbol:CJE_0645 "polyprenyl synthetase family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_178660.1 ProteinModelPortal:Q5HVM5 STRING:Q5HVM5
GeneID:3232032 KEGG:cjr:CJE0645 PATRIC:20043010 OMA:DIQDESE
ProtClustDB:CLSK872307 BioCyc:CJEJ195099:GJC0-660-MONOMER
Uniprot:Q5HVM5
Length = 297
Score = 182 (69.1 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 45/125 (36%), Positives = 66/125 (52%)
Query: 163 SVMGNKLAILAGDLLISRALVALASLKHTE---VIMECYMQKTYNKTAALVSNSCKAVAY 219
S M + A + D ++ A+ L + E + E Y++ YNKTA L+ S + A
Sbjct: 106 SKMDARFASIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGAI 165
Query: 220 LSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAM 279
L+G E+ A EYGKNLGLA+Q+IDDILD LGK ++ D + G T P ++
Sbjct: 166 LAGLYEK--DFA-EYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPYIYLY 222
Query: 280 EEFPQ 284
E +
Sbjct: 223 ENLQE 227
Score = 138 (53.6 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 30/88 (34%), Positives = 54/88 (61%)
Query: 104 LNVCTPELSPNVLGNTLILDLRRRQQCIAEIT---EMIHVASLIHDDVLDDADTRRGIGS 160
LN+ + S L + L+L + + +I E+IH+ASL+HDD++D+++ RRG S
Sbjct: 21 LNMLSNVKSGKKLRSKLLLTIADESEIAFKICAAIELIHLASLLHDDIIDESELRRGARS 80
Query: 161 LSSVMGNKLAILAGDLLISRALVALASL 188
+++ G K A++ GD+L S+A L+ +
Sbjct: 81 VNAEFGTKNALMLGDILYSKAFYELSKM 108
>ZFIN|ZDB-GENE-040718-43 [details] [associations]
symbol:pdss2 "prenyl (decaprenyl) diphosphate
synthase, subunit 2" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000092 Pfam:PF00348
ZFIN:ZDB-GENE-040718-43 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
CTD:57107 HOVERGEN:HBG058860 KO:K12505 EMBL:BC075908
IPI:IPI00489656 RefSeq:NP_001002351.1 UniGene:Dr.88524
ProteinModelPortal:Q6DHQ9 STRING:Q6DHQ9 PRIDE:Q6DHQ9 GeneID:436624
KEGG:dre:436624 InParanoid:Q6DHQ9 NextBio:20831069 Bgee:Q6DHQ9
Uniprot:Q6DHQ9
Length = 370
Score = 184 (69.8 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 46/144 (31%), Positives = 83/144 (57%)
Query: 52 LVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNVCTPEL 111
L+ DELS ++M +R +V + P L +A G+ + + ++ V+LLM+ A P
Sbjct: 49 LLSDELSNVAMHVRKLVGTKHPLLNTARGFVY-DSRNNLQMRGLVVLLMSKAAG---PS- 103
Query: 112 SPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVM-GNKLA 170
S + + ++++ + Q+ +AEITE+IH A L+H +++ + G L + GNK+A
Sbjct: 104 SSDPIHDSMVSGIYPSQRNLAEITELIHTAFLVHRGIVNLKEWTNSDGPLKDMQFGNKMA 163
Query: 171 ILAGDLLISRALVALASLKHTEVI 194
+L+GD L++ A LA L T+V+
Sbjct: 164 VLSGDFLLANACTGLAQLNDTKVV 187
>UNIPROTKB|B4DKU5 [details] [associations]
symbol:PDSS2 "Decaprenyl-diphosphate synthase subunit 2"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 EMBL:AL121957 EMBL:AL590489
EMBL:AL355586 EMBL:AL591516 UniGene:Hs.486095 HGNC:HGNC:23041
HOGENOM:HOG000294216 HOVERGEN:HBG058860 EMBL:AK296717
IPI:IPI00908713 SMR:B4DKU5 STRING:B4DKU5 Ensembl:ENST00000453874
UCSC:uc011eal.1 Uniprot:B4DKU5
Length = 297
Score = 178 (67.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 46/144 (31%), Positives = 84/144 (58%)
Query: 52 LVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNVCTPEL 111
L+ DELS I+M++R +V + P L +A G + +L V+LL++ A + +
Sbjct: 72 LLSDELSNIAMQVRKLVGTQHPLLTTARG-LVHDSWNSLQLRGLVVLLISKAAGPSS--V 128
Query: 112 SPNVLGNTLILDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVM-GNKLA 170
+ + ++ + Q+ +AEITE+IH+A L+H +++ + + G L + GNK+A
Sbjct: 129 NTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQFGNKIA 188
Query: 171 ILAGDLLISRALVALASLKHTEVI 194
IL+GD L++ A LA L++T+V+
Sbjct: 189 ILSGDFLLANACNGLALLQNTKVV 212
>UNIPROTKB|Q9KUT1 [details] [associations]
symbol:VC_0434 "Octaprenyl-diphosphate synthase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006744 "ubiquinone biosynthetic process" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 180 (68.4 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 79/327 (24%), Positives = 142/327 (43%)
Query: 51 SLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNV---- 106
+L ++++ ++ + + + ++V L + G++ G GK+L P + +L A AL
Sbjct: 33 ALTANDMAKVNETIHAQLNSDV-SLINQLGFYIISG-GGKRLRPLLAVLSAKALGYQGSH 90
Query: 107 -CTPELSPNVLGNTLIL--------DLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRG 157
T + +L DLRR + A + AS++ D + +
Sbjct: 91 HTTAAAFIEFIHTATLLHDDVVDESDLRRGK-ATANAA-FGNAASVLVGDFIYTRSFQM- 147
Query: 158 IGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAV 217
+ L S+ KL A +++ + L + + YMQ Y+KTA L + +
Sbjct: 148 MTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIG 207
Query: 218 AYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILF 277
A L EV YGK LG A+QLIDD++D+T +GK DL G T P+L+
Sbjct: 208 AILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLY 267
Query: 278 AMEEF-PQLRAFINSS---SDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSL 333
AM+ P+ A I + ++ + ++ IL + ++ +Q T E + L
Sbjct: 268 AMQHGNPEQAAMIREAIEKANGMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAIL 327
Query: 334 PETHDVDATNARTALVHITQKIITRNK 360
PE+ + AL+ + + R+K
Sbjct: 328 PESE------YKQALITLAHMAVNRSK 348
>TIGR_CMR|VC_0434 [details] [associations]
symbol:VC_0434 "octaprenyl-diphosphate synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 180 (68.4 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 79/327 (24%), Positives = 142/327 (43%)
Query: 51 SLVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNV---- 106
+L ++++ ++ + + + ++V L + G++ G GK+L P + +L A AL
Sbjct: 33 ALTANDMAKVNETIHAQLNSDV-SLINQLGFYIISG-GGKRLRPLLAVLSAKALGYQGSH 90
Query: 107 -CTPELSPNVLGNTLIL--------DLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRG 157
T + +L DLRR + A + AS++ D + +
Sbjct: 91 HTTAAAFIEFIHTATLLHDDVVDESDLRRGK-ATANAA-FGNAASVLVGDFIYTRSFQM- 147
Query: 158 IGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAV 217
+ L S+ KL A +++ + L + + YMQ Y+KTA L + +
Sbjct: 148 MTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIG 207
Query: 218 AYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILF 277
A L EV YGK LG A+QLIDD++D+T +GK DL G T P+L+
Sbjct: 208 AILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLY 267
Query: 278 AMEEF-PQLRAFINSS---SDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSL 333
AM+ P+ A I + ++ + ++ IL + ++ +Q T E + L
Sbjct: 268 AMQHGNPEQAAMIREAIEKANGMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAIL 327
Query: 334 PETHDVDATNARTALVHITQKIITRNK 360
PE+ + AL+ + + R+K
Sbjct: 328 PESE------YKQALITLAHMAVNRSK 348
>UNIPROTKB|Q8PYS1 [details] [associations]
symbol:MM_0789 "Geranylfarnesyl diphosphate synthase"
species:192952 "Methanosarcina mazei Go1" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AE008384 GenomeReviews:AE008384_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 GO:GO:0044687 RefSeq:NP_632813.1 PDB:3IPI PDBsum:3IPI
ProteinModelPortal:Q8PYS1 DNASU:1479131 GeneID:1479131
KEGG:mma:MM_0789 HOGENOM:HOG000224637 KO:K02523 OMA:IAYQIVD
ProtClustDB:CLSK782700 EvolutionaryTrace:Q8PYS1 Uniprot:Q8PYS1
Length = 295
Score = 115 (45.5 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 198 YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDF 251
Y + Y KTA+L + S AY G EE+A +G LG AYQ++DDIL+F
Sbjct: 167 YFKCIYKKTASLFAISASIGAYTGGAEEELAERFSHFGNALGTAYQIVDDILEF 220
Score = 107 (42.7 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 136 EMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVIM 195
EM+H ASLIHDD+LD RR + S G A+L GD LI+++ +A S +VI
Sbjct: 80 EMMHSASLIHDDLLDQGLVRRNLPSAPEKFGPSGALLCGDYLIAKS-IAFISPYGEKVIQ 138
Query: 196 E 196
+
Sbjct: 139 D 139
>UNIPROTKB|O66129 [details] [associations]
symbol:hexs-b "Hexaprenyl-diphosphate synthase large
subunit ((2E,6E)-farnesyl-diphosphate specific)" species:1270
"Micrococcus luteus" [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0000287 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 EMBL:AB003188 PDB:3AQB PDB:3AQC PDBsum:3AQB
PDBsum:3AQC GO:GO:0052923 ProteinModelPortal:O66129
BioCyc:MetaCyc:MONOMER-13829 ChEMBL:CHEMBL3128
EvolutionaryTrace:O66129 Uniprot:O66129
Length = 325
Score = 169 (64.5 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 45/130 (34%), Positives = 75/130 (57%)
Query: 193 VIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAF-EYGKNLGLAYQLIDDILDF 251
V Y+++ KTA L+ SC A LS Q +E +T ++G +G++YQ+IDDILD+
Sbjct: 158 VSFTAYLRRINRKTAILIEASCHLGA-LSSQLDEQSTYHIKQFGHCIGMSYQIIDDILDY 216
Query: 252 TGTSASLGKASLTDLRNGIITAPILFAM-----EEFPQLRAFIN---SSSDNPANVDVIL 303
T A+LGK +D+RNG IT P++ A+ ++ +L A + S+SD+ ++
Sbjct: 217 TSDEATLGKPVGSDIRNGHITYPLMAAIANLKEQDDDKLEAVVKHLTSTSDDEVYQYIVS 276
Query: 304 EYLGKSHGIQ 313
+ K +GI+
Sbjct: 277 QV--KQYGIE 284
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 35/120 (29%), Positives = 62/120 (51%)
Query: 136 EMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTE--- 192
E++H+ASL+HDD +D++D RRG S+ AI G L++RAL +A++ +++
Sbjct: 74 ELVHMASLVHDDYIDNSDMRRGNTSVHIAFDKDTAIRTGHFLLARALQNIATINNSKFHQ 133
Query: 193 ----VIME-CYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDD 247
I+E C+ + +++ A + AYL + A L E +LG +D+
Sbjct: 134 IFSKTILEVCFGE--FDQMADRFNYPVSFTAYLRRINRKTAIL-IEASCHLGALSSQLDE 190
Score = 45 (20.9 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 111 LSPNVLGNTLILDLRRR-QQCIAEITEMIHVASLIHDDVLDDADTR-RGIGSLSSVMGNK 168
LS N I+++ +R +CI +E I+ A+ H +L R R + L S N
Sbjct: 4 LSYKAFLNPYIIEVEKRLYECIQSDSETINKAA--HH-ILSSGGKRVRPMFVLLSGFLND 60
Query: 169 LAILAGDLL---ISRALVALASLKHTEVIMECYMQK 201
DL+ +S LV +ASL H + I M++
Sbjct: 61 TQ--KDDLIRTAVSLELVHMASLVHDDYIDNSDMRR 94
>UNIPROTKB|P0AD57 [details] [associations]
symbol:ispB "IspB" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016094
"polyprenol biosynthetic process" evidence=IMP] [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U18997 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0016094 GO:GO:0004659 KO:K02523 EMBL:D13267 EMBL:X68873
PIR:E65109 RefSeq:NP_417654.1 RefSeq:YP_491372.1
ProteinModelPortal:P0AD57 SMR:P0AD57 IntAct:P0AD57 PRIDE:P0AD57
EnsemblBacteria:EBESCT00000004959 EnsemblBacteria:EBESCT00000017333
GeneID:12932117 GeneID:947364 KEGG:ecj:Y75_p3107 KEGG:eco:b3187
PATRIC:32121794 EchoBASE:EB0017 EcoGene:EG10017
HOGENOM:HOG000009102 OMA:YITSAGG ProtClustDB:PRK10888
BioCyc:EcoCyc:OPPSYN-MONOMER BioCyc:ECOL316407:JW3154-MONOMER
BioCyc:MetaCyc:OPPSYN-MONOMER Genevestigator:P0AD57 Uniprot:P0AD57
Length = 323
Score = 175 (66.7 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 75/305 (24%), Positives = 134/305 (43%)
Query: 52 LVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATAL------N 105
L +++ ++ + + ++V +L + GY+ G GK++ P + +L A A+ +
Sbjct: 9 LTAQDMAGVNAAILEQLNSDV-QLINQLGYYIVSG-GGKRIRPMIAVLAARAVGYEGNAH 66
Query: 106 VCTPELSPNVLGNTLILDL------RRRQQCIAEITEMIHVASLIHDDVLDDA-DTRRGI 158
V L + TL+ D RR + A + L+ D + A +
Sbjct: 67 VTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSL 126
Query: 159 GSLS--SVMGNKLAILA-GDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCK 215
GSL VM + ++A G++L L ++ ++ E YM+ Y+KTA L + +
Sbjct: 127 GSLKVLEVMSEAVNVIAEGEVL------QLMNVNDPDITEENYMRVIYSKTARLFEAAAQ 180
Query: 216 AVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPI 275
L+G E +YG+ LG A+QLIDD+LD+ LGK DL G T P+
Sbjct: 181 CSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPL 240
Query: 276 LFAMEE-FPQLRAFINSSSD--NPANV-DVILEYLGKSHGIQRTTEXXXXXXXXXXXXID 331
L AM P+ I ++ + N ++ + +LE + ++ T + +
Sbjct: 241 LHAMHHGTPEQAQMIRTAIEQGNGRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQ 300
Query: 332 SLPET 336
LP+T
Sbjct: 301 VLPDT 305
>UNIPROTKB|O50410 [details] [associations]
symbol:idsB "Geranylgeranyl diphosphate synthase, type I"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 GO:GO:0005829 GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842582 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K13787 EMBL:CP003248 PIR:F70973
RefSeq:NP_217900.1 RefSeq:YP_006516867.1 ProteinModelPortal:O50410
SMR:O50410 EnsemblBacteria:EBMYCT00000000229 GeneID:13316985
GeneID:887680 KEGG:mtu:Rv3383c KEGG:mtv:RVBD_3383c PATRIC:18156138
TubercuList:Rv3383c OMA:DLISEHK ProtClustDB:CLSK792459
Uniprot:O50410
Length = 350
Score = 116 (45.9 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 29/89 (32%), Positives = 45/89 (50%)
Query: 192 EVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFE-YGKNLGLAYQLIDDILD 250
EV ++ Y++ KTAAL + C A+ L ++ A E +G LGLA+Q +DD++
Sbjct: 186 EVTVDDYLRMAAGKTAAL-TGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIG 244
Query: 251 FTGTSASLGKASLTDLRNGIITAPILFAM 279
G GK DL T P++ A+
Sbjct: 245 IWGDPGVTGKPVGNDLARRKATLPVVAAL 273
Score = 105 (42.0 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 131 IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASL 188
++ E++H +L+HDDV+D TRRG ++ SV G +AIL GD L + A+ L L
Sbjct: 94 VSAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRILTGL 151
>TIGR_CMR|SO_3653 [details] [associations]
symbol:SO_3653 "octaprenyl-diphosphate synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISS] [GO:0009234 "menaquinone
biosynthetic process" evidence=ISS] [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 OMA:YITSAGG
RefSeq:NP_719195.2 ProteinModelPortal:Q8EB79 GeneID:1171312
KEGG:son:SO_3653 PATRIC:23526992 ProtClustDB:CLSK907271
Uniprot:Q8EB79
Length = 331
Score = 174 (66.3 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 56/197 (28%), Positives = 88/197 (44%)
Query: 169 LAILAG--DLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREE 226
L +LA ++L ++ L + + E YM+ Y KTA L + A L+G E
Sbjct: 140 LRVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGASPE 199
Query: 227 VATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAM----EEF 282
T +YGK LG A+QL DD+LD+T S LGK DL G T P+++A+ EE
Sbjct: 200 QETALGDYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPLIYAIAHGTEEE 259
Query: 283 PQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDAT 342
QL D ++ I+ L + T + + LP++
Sbjct: 260 KQLIRQAIEQGDGTHAIEKIVAALHHCGALNYTQQKAIEESNKAIAALSVLPDS------ 313
Query: 343 NARTALVHITQKIITRN 359
+ +TAL+ + + + RN
Sbjct: 314 DFKTALISLAKISVDRN 330
Score = 132 (51.5 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 131 IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKH 190
+A I E IH ASL+HDDV+D++ RRG + +++ GN ++L GD L +R+ + L
Sbjct: 77 LAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQMMTELDS 136
Query: 191 TEVI 194
V+
Sbjct: 137 MRVL 140
>UNIPROTKB|O06428 [details] [associations]
symbol:grcC1 "Heptaprenyl diphosphate synthase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842573 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 EMBL:CP003248 PIR:E70549
RefSeq:NP_215076.1 RefSeq:NP_334997.1 RefSeq:YP_006513895.1
SMR:O06428 EnsemblBacteria:EBMYCT00000001031
EnsemblBacteria:EBMYCT00000071419 GeneID:13318436 GeneID:887647
GeneID:924969 KEGG:mtc:MT0588 KEGG:mtu:Rv0562 KEGG:mtv:RVBD_0562
PATRIC:18122992 TubercuList:Rv0562 OMA:SIKAMNV
ProtClustDB:CLSK790596 Uniprot:O06428
Length = 335
Score = 168 (64.2 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 50/162 (30%), Positives = 73/162 (45%)
Query: 195 MECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGT 254
+E Y++ KT +L+ + + SG +E G +G A+Q+ DDI+D
Sbjct: 172 IEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSE 231
Query: 255 SASLGKASLTDLRNGIITAPILFAMEEF-P---QLRAFINSSSDNPANVDVILEYLGKSH 310
S GK TD+R G+ T P+L+A+ E P +LRA +N D+ A V L L S
Sbjct: 232 SDESGKLPGTDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASP 291
Query: 311 GIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHIT 352
G+ R + + LP DV A ALV T
Sbjct: 292 GMARAKDVLAQYAAQARHELALLP---DVPGRRALAALVDYT 330
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 40/111 (36%), Positives = 59/111 (53%)
Query: 134 ITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRA--LVALASLKHT 191
+ EMIH+A+L HDDV+D+A RRG S ++ GN +AILAGD L++ A LVA +
Sbjct: 85 VIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVARLGPEAV 144
Query: 192 EVIMECYMQKT---YNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLG 239
+I + + Q +T N YL +E+ +L G+ LG
Sbjct: 145 RIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLIGAAGR-LG 194
>TIGR_CMR|CPS_4513 [details] [associations]
symbol:CPS_4513 "octaprenyl-diphosphate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
OMA:YITSAGG RefSeq:YP_271161.1 ProteinModelPortal:Q47VL1
STRING:Q47VL1 GeneID:3518869 KEGG:cps:CPS_4513 PATRIC:21471849
BioCyc:CPSY167879:GI48-4522-MONOMER Uniprot:Q47VL1
Length = 327
Score = 166 (63.5 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 48/183 (26%), Positives = 87/183 (47%)
Query: 173 AGDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAF 232
A +++ ++ L + E YMQ Y KTA L + + A ++ Q ++
Sbjct: 142 ATNIVAEGEVLQLMNCNDASTTEESYMQVIYCKTAKLFEAATRLAAVIAKQDAKIEQAMA 201
Query: 233 EYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRA-FINS 291
+YGK LG A+QL+DDI+D+T + +GK DL G T P+L+AM+ + + I
Sbjct: 202 DYGKYLGTAFQLVDDIMDYTADAKEMGKNVGDDLAEGKPTLPLLYAMKHGNEAQQKLIKE 261
Query: 292 S---SDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTAL 348
+ + N+++IL+ + ++ ++ T + I +L D + A +L
Sbjct: 262 AIELGNGMDNLELILQAMEETGSLRYTQKQAEIEADKA---IKALNVIADSEHKQALISL 318
Query: 349 VHI 351
HI
Sbjct: 319 AHI 321
Score = 131 (51.2 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 131 IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKH 190
IA I E IH A+L+HDDV+D+++ RRG + +++ GN ++L GD L +R+ + L
Sbjct: 73 IAAIIEFIHTATLLHDDVVDESNMRRGRETANALFGNSASVLVGDFLYTRSFQMMTKLGD 132
Query: 191 TEVIMECYMQKT 202
IM+ + T
Sbjct: 133 MR-IMDILSEAT 143
>TIGR_CMR|ECH_0088 [details] [associations]
symbol:ECH_0088 "octaprenyl-diphosphate synthase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 OMA:QQFPELH
KO:K02523 HOGENOM:HOG000009102 RefSeq:YP_506918.1
ProteinModelPortal:Q2GI15 STRING:Q2GI15 GeneID:3927493
KEGG:ech:ECH_0088 PATRIC:20575731 ProtClustDB:CLSK749549
BioCyc:ECHA205920:GJNR-88-MONOMER Uniprot:Q2GI15
Length = 325
Score = 164 (62.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 43/153 (28%), Positives = 79/153 (51%)
Query: 167 NKLAILAG---DLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQ 223
N L+IL+ D+++ ++S + + E Y++ KTAAL S +C++ A L+
Sbjct: 136 NILSILSQASKDVIVGEVQQMISS-HNINISKEKYIEIISAKTAALFSATCESAANLAQT 194
Query: 224 REEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFP 283
E +G N G+++Q++DDILD+T + GK DL G T P++ A +
Sbjct: 195 SNEEKEALKNFGNNFGISFQIMDDILDYTASGEQFGKKLGNDLLTGKTTLPVIIAYQNAT 254
Query: 284 QL-RAFINSSSDNPANVDVILEYLGKSHGIQRT 315
+ F + S NP N++ + Y+ + I+++
Sbjct: 255 SKEKKFWDQISVNP-NLEQAISYIKVHNAIEKS 286
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 131 IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKH 190
IA E+IH A+L+HDDV+D+++ RRG + + + GNK +IL GD L++ + L K+
Sbjct: 75 IAAAIELIHNATLLHDDVIDESELRRGEKTSNVIWGNKASILVGDFLLAISFQWLIKCKN 134
Query: 191 TEVI 194
++
Sbjct: 135 LNIL 138
>UNIPROTKB|Q0C153 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000158
GenomeReviews:CP000158_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_760540.1
ProteinModelPortal:Q0C153 STRING:Q0C153 GeneID:4289927
KEGG:hne:HNE_1839 PATRIC:32216509 OMA:ICKDISK
ProtClustDB:CLSK2780959 BioCyc:HNEP228405:GI69-1865-MONOMER
Uniprot:Q0C153
Length = 295
Score = 104 (41.7 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 132 AEITEMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALAS 187
A E IH SL+HDD+ +DD D RRG ++ A+LAGD L++ A LAS
Sbjct: 71 AAALECIHCYSLVHDDLPCMDDDDFRRGQPTVHKAFDEATAVLAGDALLTLAFKILAS 128
Score = 102 (41.0 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 205 KTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLT 264
KT AL+S + +A + RE + +LGLAYQ+ DDILD G + +GKA
Sbjct: 181 KTGALISYALEAGGIIGHAREAERNALAGFANDLGLAYQIADDILDAEGDESIVGKAVSK 240
Query: 265 D 265
D
Sbjct: 241 D 241
>UNIPROTKB|Q5LX97 [details] [associations]
symbol:ddsA "Decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 159 (61.0 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 55/208 (26%), Positives = 94/208 (45%)
Query: 159 GSLS--SVMGNKLAILA-GDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCK 215
GSL ++ N A +A G++L + A + L+ E + Y+Q KTAAL S + +
Sbjct: 135 GSLRVLDILANAAATIAEGEVL---QMTAASDLRTDESV---YLQVVRGKTAALFSAATE 188
Query: 216 AVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPI 275
++G E FEYG LG+A+Q+ DD+LD+ G + + GK D R +T P+
Sbjct: 189 VGGVIAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFRERKLTLPV 248
Query: 276 LFAMEEFP-QLRAF----INSSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXI 330
+ A+ + + RAF I +++ L + K + T +
Sbjct: 249 IKAVAQATDEERAFWVRTIEKGKQAEGDLEQALALMEKYGTLAATRADAHAWAEKARTAL 308
Query: 331 DSLPETHDVDATNARTALVHITQKIITR 358
+ LP H++ RT L + ++ R
Sbjct: 309 ELLPN-HEI-----RTMLSDLADYVVAR 330
Score = 116 (45.9 bits), Expect = 0.00037, P = 0.00037
Identities = 24/67 (35%), Positives = 42/67 (62%)
Query: 131 IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRA---LVALAS 187
+A E IH A+L+HDDV+D++ RRG + + + NK ++L GD L +R+ +V S
Sbjct: 77 LAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVETGS 136
Query: 188 LKHTEVI 194
L+ +++
Sbjct: 137 LRVLDIL 143
>TIGR_CMR|SPO_0319 [details] [associations]
symbol:SPO_0319 "decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 159 (61.0 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 55/208 (26%), Positives = 94/208 (45%)
Query: 159 GSLS--SVMGNKLAILA-GDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCK 215
GSL ++ N A +A G++L + A + L+ E + Y+Q KTAAL S + +
Sbjct: 135 GSLRVLDILANAAATIAEGEVL---QMTAASDLRTDESV---YLQVVRGKTAALFSAATE 188
Query: 216 AVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPI 275
++G E FEYG LG+A+Q+ DD+LD+ G + + GK D R +T P+
Sbjct: 189 VGGVIAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFRERKLTLPV 248
Query: 276 LFAMEEFP-QLRAF----INSSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXI 330
+ A+ + + RAF I +++ L + K + T +
Sbjct: 249 IKAVAQATDEERAFWVRTIEKGKQAEGDLEQALALMEKYGTLAATRADAHAWAEKARTAL 308
Query: 331 DSLPETHDVDATNARTALVHITQKIITR 358
+ LP H++ RT L + ++ R
Sbjct: 309 ELLPN-HEI-----RTMLSDLADYVVAR 330
Score = 116 (45.9 bits), Expect = 0.00037, P = 0.00037
Identities = 24/67 (35%), Positives = 42/67 (62%)
Query: 131 IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRA---LVALAS 187
+A E IH A+L+HDDV+D++ RRG + + + NK ++L GD L +R+ +V S
Sbjct: 77 LAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVETGS 136
Query: 188 LKHTEVI 194
L+ +++
Sbjct: 137 LRVLDIL 143
>TIGR_CMR|APH_1247 [details] [associations]
symbol:APH_1247 "octaprenyl-diphosphate synthase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
ProtClustDB:CLSK749549 RefSeq:YP_505772.1 ProteinModelPortal:Q2GIM9
STRING:Q2GIM9 GeneID:3930831 KEGG:aph:APH_1247 PATRIC:20951282
OMA:MIPEISN BioCyc:APHA212042:GHPM-1251-MONOMER Uniprot:Q2GIM9
Length = 316
Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 70/285 (24%), Positives = 128/285 (44%)
Query: 52 LVGDELSLISMRLRSMVVAEVPELASAAGYFFKEGVEGKKLCPTVILLMATALNVCTP-- 109
LV EL + + +EV +A + G GK+ P V+LL A + CT
Sbjct: 4 LVASELQEMESLIVKQRHSEVQLIADIIQHLILSG--GKRTRP-VMLLAACGMLGCTDAR 60
Query: 110 --------EL--SPNVLGNTLI--LDLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRG 157
E S +L + ++ D+RR + I + AS++ D L A +
Sbjct: 61 RIVVAAAIEFLHSATLLHDDVVDKSDMRRGVETANSIWG--NKASILVGDFLF-ATAFQW 117
Query: 158 IGSLSSVMGNKLAILAG--DLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCK 215
I S +S+ L++L+ +++S + L ++ Y++ +KTA L S +C+
Sbjct: 118 IVSCNSIQ--LLSVLSNTASIIVSGEMQQLVHSSSLDISRTKYLEIISSKTAVLFSAACE 175
Query: 216 AVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPI 275
+ A L ++G N G+ +Q++DDILD+T LGK + D+ +G +T P+
Sbjct: 176 SAAVLHDVGTLQRNALRDWGFNFGIVFQILDDILDYTANQNELGKRTYNDIVSGKVTLPL 235
Query: 276 LFAMEEFPQ-----LRAFINSSSDNPANVDVILEYLGKSHGIQRT 315
+ A E + LR ++ +P D+ Y+ + I+++
Sbjct: 236 IIAYEGASEKDRIGLRGALSRERPDP---DLAFSYIMAQNAIEKS 277
>TIGR_CMR|CJE_1816 [details] [associations]
symbol:CJE_1816 "geranyltranstransferase" species:195099
"Campylobacter jejuni RM1221" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 OMA:DLISEHK RefSeq:YP_179786.1 PDB:3NPK
PDBsum:3NPK ProteinModelPortal:Q5HSE9 STRING:Q5HSE9 GeneID:3232443
KEGG:cjr:CJE1816 PATRIC:20045454 ProtClustDB:CLSK872468
BioCyc:CJEJ195099:GJC0-1850-MONOMER Uniprot:Q5HSE9
Length = 281
Score = 109 (43.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 32/81 (39%), Positives = 43/81 (53%)
Query: 131 IAEITEMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASL 188
+A E IH SLIHDD+ +D+AD RRGI +L AIL GD L + A + L S
Sbjct: 63 VALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVL-SH 121
Query: 189 KHTEVIMECYMQKTYNKTAAL 209
H + ++ + KT A L
Sbjct: 122 AHLKDEIKIKLIKTLAFNAGL 142
Score = 86 (35.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 204 NKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASL 263
+KTA L++ + K + E + ++ G LGL +Q+ DDI+D T + GK +
Sbjct: 171 HKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTN 230
Query: 264 TDL-RNGII 271
D+ +N +
Sbjct: 231 NDIHKNSFV 239
>UNIPROTKB|Q74CA9 [details] [associations]
symbol:GSU1765 "Trans-isoprenyl diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789
RefSeq:NP_952815.1 ProteinModelPortal:Q74CA9 GeneID:2685235
KEGG:gsu:GSU1765 PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 148 (57.2 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 36/116 (31%), Positives = 59/116 (50%)
Query: 167 NKLAILAGDL-LISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQRE 225
+++A+ AG ++ +V + S + E+ + KT AL+ S KA A L G
Sbjct: 144 HEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTGALIKASIKAGAVLGGANA 203
Query: 226 EVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEE 281
+ YG+ +GLA+Q+ DDILD GT+ +GK + +D G T P + + E
Sbjct: 204 DAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYPAVLGLAE 259
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 52/179 (29%), Positives = 83/179 (46%)
Query: 136 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEV 193
EMIH SLIHDD+ +DD D RRG + V G +AILAGD L++ A + ++S +
Sbjct: 74 EMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTEAFILISSPSYAAA 133
Query: 194 IMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTG 253
+ + ++ A L + S V GQ V + E K + LA + I T
Sbjct: 134 VGSDRLLPVIHEIA-LCAGSRGMVG---GQ---VVDMESEGNKEIDLA--TVQYI--HTR 182
Query: 254 TSASLGKASL-TDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHG 311
+ +L KAS+ G A + A+ + + +D+ +++ E +GK G
Sbjct: 183 KTGALIKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAG 241
>TIGR_CMR|GSU_1765 [details] [associations]
symbol:GSU_1765 "geranyltranstransferase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789 RefSeq:NP_952815.1
ProteinModelPortal:Q74CA9 GeneID:2685235 KEGG:gsu:GSU1765
PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 148 (57.2 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 36/116 (31%), Positives = 59/116 (50%)
Query: 167 NKLAILAGDL-LISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQRE 225
+++A+ AG ++ +V + S + E+ + KT AL+ S KA A L G
Sbjct: 144 HEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTGALIKASIKAGAVLGGANA 203
Query: 226 EVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEE 281
+ YG+ +GLA+Q+ DDILD GT+ +GK + +D G T P + + E
Sbjct: 204 DAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYPAVLGLAE 259
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 52/179 (29%), Positives = 83/179 (46%)
Query: 136 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEV 193
EMIH SLIHDD+ +DD D RRG + V G +AILAGD L++ A + ++S +
Sbjct: 74 EMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTEAFILISSPSYAAA 133
Query: 194 IMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTG 253
+ + ++ A L + S V GQ V + E K + LA + I T
Sbjct: 134 VGSDRLLPVIHEIA-LCAGSRGMVG---GQ---VVDMESEGNKEIDLA--TVQYI--HTR 182
Query: 254 TSASLGKASL-TDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHG 311
+ +L KAS+ G A + A+ + + +D+ +++ E +GK G
Sbjct: 183 KTGALIKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAG 241
>ASPGD|ASPL0000062493 [details] [associations]
symbol:AN0654 species:162425 "Emericella nidulans"
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=IEA] [GO:0016114
"terpenoid biosynthetic process" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:BN001308 GO:GO:0016740
EMBL:AACD01000010 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000169461 KO:K00804 OrthoDB:EOG4QVGMM
RefSeq:XP_658258.1 ProteinModelPortal:Q5BFM6 SMR:Q5BFM6
STRING:Q5BFM6 EnsemblFungi:CADANIAT00002021 GeneID:2876433
KEGG:ani:AN0654.2 OMA:ICDDYLN Uniprot:Q5BFM6
Length = 396
Score = 100 (40.3 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 39/170 (22%), Positives = 67/170 (39%)
Query: 198 YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSAS 257
Y++ NKT L + K + S ++ L LGL +Q+ DD L+ + T+ +
Sbjct: 215 YLEMVGNKTGGLFRLAVKLMQAESSTGKDCVALV----NVLGLVFQICDDYLNLSDTTYT 270
Query: 258 LGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDV---ILEYLGKSHGIQR 314
K DL G + PI+ ++ P IN + +V L+Y+ + +
Sbjct: 271 QNKGLCEDLTEGKFSFPIIHSIRSNPGNHQLINILRQRTKDEEVKRYALQYMESTGSFKH 330
Query: 315 TTEXXXXXXXXXXXXIDSL--------PETHDVDATNARTALVHITQKII 356
T + I+ + PE H+ D T R L IT+ +
Sbjct: 331 TQDVVRQLRARALQLIEEIENSENGEQPEEHN-DGTMVRAILDKITESTL 379
Score = 95 (38.5 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 131 IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKH 190
I ++ M+H ASL+ DDV D++ RRGI S+ G I + + + AL + LK
Sbjct: 120 ITKVVAMLHTASLLIDDVEDNSLLRRGIPVAHSIYGTAQTINSANYVYFLALQEVQKLKS 179
Query: 191 TEVIMECYMQKTYN 204
I + Y+Q+ N
Sbjct: 180 PAAI-DIYVQELLN 192
>UNIPROTKB|Q9P885 [details] [associations]
symbol:carG "Geranylgeranyl pyrophosphate synthase"
species:29924 "Mucor circinelloides f. lusitanicus" [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0016117
"carotenoid biosynthetic process" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0033386 EMBL:AJ276129 ProteinModelPortal:Q9P885 SMR:Q9P885
Uniprot:Q9P885
Length = 303
Score = 99 (39.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 31/125 (24%), Positives = 56/125 (44%)
Query: 196 ECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTS 255
E Y+ NKT+ L+ + + + S + L +G+ +Q+ DD ++ TS
Sbjct: 147 EEYIDMVNNKTSGLLRLAVRLMQAASESDIDYTPLV----NIIGIHFQVRDDYMNLQSTS 202
Query: 256 ASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDV---ILEYLGKSHGI 312
+ K DL G + PI+ A+ + P R +N S P +++V LE + K+
Sbjct: 203 YTNNKGFCEDLTEGKFSFPIIHAIRKDPSNRQLLNIISQKPTSIEVKKYALEVIRKAGSF 262
Query: 313 QRTTE 317
+ E
Sbjct: 263 EYVRE 267
Score = 88 (36.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 131 IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKH 190
I +I M+H ASL+ DDV DD+D RRG+ + G I + +I AL + L
Sbjct: 54 INKIIGMLHNASLMIDDVQDDSDLRRGVPVAHHIYGVPQTINTANYVIFLALQEVMKLNI 113
Query: 191 TEVIMEC 197
++ C
Sbjct: 114 PSMMQVC 120
>TAIR|locus:2115450 [details] [associations]
symbol:GGPS1 "geranylgeranyl pyrophosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IDA] [GO:0009513 "etioplast" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AL161590 GO:GO:0016117 EMBL:Z99708 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:L25813 IPI:IPI00516537 PIR:F85434
RefSeq:NP_195399.1 UniGene:At.304 ProteinModelPortal:P34802
SMR:P34802 STRING:P34802 PaxDb:P34802 PRIDE:P34802
EnsemblPlants:AT4G36810.1 GeneID:829834 KEGG:ath:AT4G36810
TAIR:At4g36810 InParanoid:P34802 KO:K13789 OMA:MEFAHAV
PhylomeDB:P34802 ProtClustDB:CLSN2915918
BioCyc:ARA:AT4G36810-MONOMER BioCyc:MetaCyc:AT4G36810-MONOMER
BRENDA:2.5.1.29 Genevestigator:P34802 GermOnline:AT4G36810
GO:GO:0009513 GO:GO:0051501 Uniprot:P34802
Length = 371
Score = 144 (55.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 45/155 (29%), Positives = 77/155 (49%)
Query: 139 HVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLL-ISRALVAL--ASLKHTEVIM 195
H+AS DV+ R +G L+ +G + ++AG ++ IS + L L+H E I
Sbjct: 195 HLASATSSDVVSPVRVVRAVGELAKAIGTE-GLVAGQVVDISSEGLDLNDVGLEHLEFIH 253
Query: 196 ECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTS 255
+KTAAL+ S A + G ++ ++ + +GL +Q++DDILD T +S
Sbjct: 254 -------LHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSS 306
Query: 256 ASLGKASLTDLRNGIITAPILFAMEEFPQLRAFIN 290
LGK + DL +T P + +E+ + +N
Sbjct: 307 KELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLN 341
Score = 126 (49.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/109 (31%), Positives = 58/109 (53%)
Query: 136 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEV 193
EMIH SLIHDD+ +D+ D RRG + V G +A+LAGD L+S A LAS ++V
Sbjct: 145 EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDV 204
Query: 194 IMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAY 242
+ + + + A + ++GQ ++++ + ++GL +
Sbjct: 205 VSPVRVVRAVGELAKAIGTE----GLVAGQVVDISSEGLDLN-DVGLEH 248
>TIGR_CMR|ECH_0455 [details] [associations]
symbol:ECH_0455 "putative geranyltranstransferase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 OMA:ICKDISK RefSeq:YP_507273.1
ProteinModelPortal:Q2GH10 STRING:Q2GH10 GeneID:3926960
KEGG:ech:ECH_0455 PATRIC:20576384 ProtClustDB:CLSK749162
BioCyc:ECHA205920:GJNR-456-MONOMER Uniprot:Q2GH10
Length = 267
Score = 111 (44.1 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 131 IAEITEMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASL 188
++ E+IHV SLIHDD+ +D+ + RRG S +AIL GD L++ A L+++
Sbjct: 61 VSAAVEIIHVYSLIHDDLPGIDNENIRRGQASSHKKFNEAIAILTGDALLTLAFEILSTI 120
Query: 189 KHTEVIMECYMQKTYNK 205
+ I C M K K
Sbjct: 121 DESPFI-RCCMIKALAK 136
Score = 70 (29.7 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 205 KTAALVSNSCKAVAYLSGQRE-EVATLAFEYGKNLGLAYQLIDDILD 250
KTA S +C+ L E+ LA YG NLG A+Q+ DDI D
Sbjct: 168 KTAQFFSVACELGGILGNASNIELNALA-NYGLNLGHAFQVKDDIAD 213
>UNIPROTKB|Q9KTL2 [details] [associations]
symbol:VC_0890 "Geranyltranstransferase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 95 (38.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 204 NKTAALVSNSCKAVAYLSGQREEVATLAFE-YGKNLGLAYQLIDDILDFTGTSASLGKAS 262
NKT AL+ + + A +G++ + Y + +GLA+Q+ DDILD + +LGK
Sbjct: 178 NKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQ 237
Query: 263 LTDLRNGIITAPILFAME 280
+D T P L +E
Sbjct: 238 GSDQELNKSTYPALLGLE 255
Score = 89 (36.4 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 24/57 (42%), Positives = 29/57 (50%)
Query: 132 AEITEMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALA 186
A E IH SLIHDD+ +DD + RRG + AIL GD L + A LA
Sbjct: 68 ASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILA 124
>TIGR_CMR|VC_0890 [details] [associations]
symbol:VC_0890 "geranyltranstransferase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 95 (38.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 204 NKTAALVSNSCKAVAYLSGQREEVATLAFE-YGKNLGLAYQLIDDILDFTGTSASLGKAS 262
NKT AL+ + + A +G++ + Y + +GLA+Q+ DDILD + +LGK
Sbjct: 178 NKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQ 237
Query: 263 LTDLRNGIITAPILFAME 280
+D T P L +E
Sbjct: 238 GSDQELNKSTYPALLGLE 255
Score = 89 (36.4 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 24/57 (42%), Positives = 29/57 (50%)
Query: 132 AEITEMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALA 186
A E IH SLIHDD+ +DD + RRG + AIL GD L + A LA
Sbjct: 68 ASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILA 124
>UNIPROTKB|P0A5H8 [details] [associations]
symbol:MT3506 "(2E,6E)-farnesyl diphosphate synthase"
species:1773 "Mycobacterium tuberculosis" [GO:0000287 "magnesium
ion binding" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005506
"iron ion binding" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0033384 "geranyl diphosphate
biosynthetic process" evidence=IDA] [GO:0033386 "geranylgeranyl
diphosphate biosynthetic process" evidence=IDA] [GO:0040007
"growth" evidence=IMP] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00766 GO:GO:0005737
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0005506 GO:GO:0016126
GO:GO:0030145 EMBL:BX842582 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 PIR:C70735 RefSeq:NP_338029.1
RefSeq:YP_006516883.1 RefSeq:YP_177970.1 ProteinModelPortal:P0A5H8
SMR:P0A5H8 EnsemblBacteria:EBMYCT00000003545
EnsemblBacteria:EBMYCT00000069473 GeneID:13317001 GeneID:887919
GeneID:926589 KEGG:mtc:MT3506 KEGG:mtu:Rv3398c KEGG:mtv:RVBD_3398c
PATRIC:18129451 TubercuList:Rv3398c HOGENOM:HOG000009101 KO:K13787
OMA:RMAPLES ProtClustDB:CLSK799990 BioCyc:MetaCyc:MONOMER-15280
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0033386 Uniprot:P0A5H8
Length = 359
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/138 (30%), Positives = 69/138 (50%)
Query: 142 SLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVIMECYMQK 201
SL H+ VL D D+ +L ++ ++ G A A S T+V ++ ++
Sbjct: 145 SLAHE-VLLDCDSPHVGAALRAISEATRELIRGQA----ADTAFES--RTDVALDECLKM 197
Query: 202 TYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKA 261
KTAAL++ S + A L+G V YG+++GLA+QL+DD+L G GK
Sbjct: 198 AEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWGRPEITGKP 257
Query: 262 SLTDLRNGIITAPILFAM 279
+DLR+ T P+ + +
Sbjct: 258 VYSDLRSRKKTLPVTWTV 275
>UNIPROTKB|Q2GD75 [details] [associations]
symbol:NSE_0694 "Putative geranyltranstransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
GO:GO:0003824 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 RefSeq:YP_506571.1
ProteinModelPortal:Q2GD75 STRING:Q2GD75 GeneID:3931424
KEGG:nse:NSE_0694 PATRIC:22681407 OMA:LAESSHI
ProtClustDB:CLSK2527634 BioCyc:NSEN222891:GHFU-707-MONOMER
Uniprot:Q2GD75
Length = 256
Score = 96 (38.9 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 131 IAEITEMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASL 188
+A EMIH SLIHDD+ LD++D RR + AILAGD L+ A L+
Sbjct: 68 VAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDALLVLAYQMLS-- 125
Query: 189 KHTEVIMEC 197
++ +++C
Sbjct: 126 RYGTPLVQC 134
Score = 77 (32.2 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 205 KTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILD 250
K+ +L + SC +V +L+ + T+ +G +G+ +Q +DDI D
Sbjct: 165 KSGSLFALSCSSVGHLANSGQSELTVLEAFGYEIGIIFQAVDDIKD 210
>TIGR_CMR|NSE_0694 [details] [associations]
symbol:NSE_0694 "putative geranyltranstransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
GO:GO:0003824 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 RefSeq:YP_506571.1
ProteinModelPortal:Q2GD75 STRING:Q2GD75 GeneID:3931424
KEGG:nse:NSE_0694 PATRIC:22681407 OMA:LAESSHI
ProtClustDB:CLSK2527634 BioCyc:NSEN222891:GHFU-707-MONOMER
Uniprot:Q2GD75
Length = 256
Score = 96 (38.9 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 131 IAEITEMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASL 188
+A EMIH SLIHDD+ LD++D RR + AILAGD L+ A L+
Sbjct: 68 VAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDALLVLAYQMLS-- 125
Query: 189 KHTEVIMEC 197
++ +++C
Sbjct: 126 RYGTPLVQC 134
Score = 77 (32.2 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 205 KTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILD 250
K+ +L + SC +V +L+ + T+ +G +G+ +Q +DDI D
Sbjct: 165 KSGSLFALSCSSVGHLANSGQSELTVLEAFGYEIGIIFQAVDDIKD 210
>UNIPROTKB|C9J7M1 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0004337 "geranyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AL391994 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004337
HOGENOM:HOG000169461 HGNC:HGNC:4249 ChiTaRS:GGPS1 IPI:IPI00945938
ProteinModelPortal:C9J7M1 SMR:C9J7M1 STRING:C9J7M1
Ensembl:ENST00000471812 ArrayExpress:C9J7M1 Bgee:C9J7M1
Uniprot:C9J7M1
Length = 242
Score = 97 (39.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 129 QCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASL 188
Q I E+TEM+H ASL+ DD+ D++ RRG S+ G I + + + L + +L
Sbjct: 47 QIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTL 106
Query: 189 KHTEVI 194
H + +
Sbjct: 107 DHPDAV 112
Score = 68 (29.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 25/105 (23%), Positives = 39/105 (37%)
Query: 196 ECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTS 255
E Y KT L + + S +E++ L LGL +Q+ DD +
Sbjct: 142 EEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLL----NTLGLFFQIRDDYANLHSKE 197
Query: 256 ASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVD 300
S K+ DL G + P + A+ P+ N N+D
Sbjct: 198 YSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENID 242
>UNIPROTKB|P56966 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9913 "Bos taurus" [GO:0004311 "farnesyltranstransferase
activity" evidence=IDA] [GO:0006720 "isoprenoid metabolic process"
evidence=IDA] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IEA] [GO:0033386 "geranylgeranyl diphosphate
biosynthetic process" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004337 "geranyltranstransferase
activity" evidence=IEA] [GO:0004161 "dimethylallyltranstransferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
EMBL:BC120313 IPI:IPI00690042 RefSeq:NP_001073269.1
UniGene:Bt.71777 ProteinModelPortal:P56966 SMR:P56966 STRING:P56966
Ensembl:ENSBTAT00000017376 GeneID:780882 KEGG:bta:780882 CTD:9453
GeneTree:ENSGT00390000010417 HOGENOM:HOG000169461
HOVERGEN:HBG051729 InParanoid:P56966 KO:K00804 OMA:MLAIRLM
OrthoDB:EOG4CG08P NextBio:20924524 GO:GO:0006720 Uniprot:P56966
Length = 300
Score = 98 (39.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 129 QCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASL 188
Q I E+TEM+H ASL+ DD+ D++ RRG S+ G I + + + L + +L
Sbjct: 47 QIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTL 106
Query: 189 KHTEVI 194
H + +
Sbjct: 107 NHPDAV 112
Score = 70 (29.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 25/106 (23%), Positives = 40/106 (37%)
Query: 196 ECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTS 255
E Y KT L + + S +E++ L LGL +Q+ DD +
Sbjct: 142 EEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLL----DTLGLFFQIRDDYANLHSKE 197
Query: 256 ASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDV 301
S K+ DL G + P + A+ P+ N N+D+
Sbjct: 198 YSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENIDI 243
>UNIPROTKB|E2R3P8 [details] [associations]
symbol:GGPS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:9453
GeneTree:ENSGT00390000010417 KO:K00804 OMA:LLEPYRY
EMBL:AAEX03002683 RefSeq:XP_003639028.1 RefSeq:XP_536340.2
Ensembl:ENSCAFT00000017968 GeneID:479198 KEGG:cfa:479198
Uniprot:E2R3P8
Length = 300
Score = 97 (39.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 129 QCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASL 188
Q I E+TEM+H ASL+ DD+ D++ RRG S+ G I + + + L + +L
Sbjct: 47 QIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLQKVLTL 106
Query: 189 KHTEVI 194
H + +
Sbjct: 107 DHPDAV 112
Score = 71 (30.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 25/106 (23%), Positives = 40/106 (37%)
Query: 196 ECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTS 255
E Y KT L + + S +E++ L LGL +Q+ DD +
Sbjct: 142 EEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLL----NTLGLFFQIRDDYANLHSKE 197
Query: 256 ASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDV 301
S K+ DL G + P + A+ P+ N N+D+
Sbjct: 198 YSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENIDI 243
>UNIPROTKB|O95749 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IEA] [GO:0004337 "geranyltranstransferase activity"
evidence=IEA] [GO:0033384 "geranyl diphosphate biosynthetic
process" evidence=IEA] [GO:0033386 "geranylgeranyl diphosphate
biosynthetic process" evidence=IEA] [GO:0045337 "farnesyl
diphosphate biosynthetic process" evidence=IEA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0005829
"cytosol" evidence=TAS] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] Reactome:REACT_111217 InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005829
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006695 EMBL:AL391994 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 CTD:9453
HOGENOM:HOG000169461 HOVERGEN:HBG051729 KO:K00804 OrthoDB:EOG4CG08P
GO:GO:0006720 EMBL:AB017971 EMBL:AB019036 EMBL:AF125394
EMBL:AB016043 EMBL:AF057698 EMBL:BC005252 EMBL:BC067768
IPI:IPI00032892 RefSeq:NP_001032354.1 UniGene:Hs.730768 PDB:2Q80
PDBsum:2Q80 ProteinModelPortal:O95749 SMR:O95749 STRING:O95749
PhosphoSite:O95749 PaxDb:O95749 PRIDE:O95749 DNASU:9453
Ensembl:ENST00000282841 Ensembl:ENST00000358966
Ensembl:ENST00000476121 Ensembl:ENST00000488594 GeneID:9453
KEGG:hsa:9453 UCSC:uc001hwv.3 GeneCards:GC01P235490 HGNC:HGNC:4249
HPA:HPA029472 MIM:606982 neXtProt:NX_O95749 PharmGKB:PA28661
InParanoid:O95749 OMA:LLEPYRY PhylomeDB:O95749
BioCyc:MetaCyc:HS07859-MONOMER SABIO-RK:O95749 BindingDB:O95749
ChEMBL:CHEMBL4769 ChiTaRS:GGPS1 EvolutionaryTrace:O95749
GenomeRNAi:9453 NextBio:35412 ArrayExpress:O95749 Bgee:O95749
CleanEx:HS_GGPS1 Genevestigator:O95749 GermOnline:ENSG00000152904
Uniprot:O95749
Length = 300
Score = 97 (39.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 129 QCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASL 188
Q I E+TEM+H ASL+ DD+ D++ RRG S+ G I + + + L + +L
Sbjct: 47 QIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTL 106
Query: 189 KHTEVI 194
H + +
Sbjct: 107 DHPDAV 112
Score = 71 (30.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 25/106 (23%), Positives = 40/106 (37%)
Query: 196 ECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTS 255
E Y KT L + + S +E++ L LGL +Q+ DD +
Sbjct: 142 EEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLL----NTLGLFFQIRDDYANLHSKE 197
Query: 256 ASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDV 301
S K+ DL G + P + A+ P+ N N+D+
Sbjct: 198 YSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENIDI 243
>UNIPROTKB|F1RGX0 [details] [associations]
symbol:GGPS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004337 "geranyltranstransferase activity"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004337 GeneTree:ENSGT00390000010417 KO:K00804
OMA:LLEPYRY EMBL:CU468332 RefSeq:XP_003483520.1
ProteinModelPortal:F1RGX0 Ensembl:ENSSSCT00000011119
GeneID:100739526 KEGG:ssc:100739526 Uniprot:F1RGX0
Length = 300
Score = 97 (39.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 129 QCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASL 188
Q I E+TEM+H ASL+ DD+ D++ RRG S+ G I + + + L + +L
Sbjct: 47 QIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTL 106
Query: 189 KHTEVI 194
H + +
Sbjct: 107 DHPDAV 112
Score = 71 (30.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 25/106 (23%), Positives = 40/106 (37%)
Query: 196 ECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTS 255
E Y KT L + + S +E++ L LGL +Q+ DD +
Sbjct: 142 EEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLL----NTLGLFFQIRDDYANLHSKE 197
Query: 256 ASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDV 301
S K+ DL G + P + A+ P+ N N+D+
Sbjct: 198 YSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENIDI 243
>ZFIN|ZDB-GENE-030131-8742 [details] [associations]
symbol:ggps1 "geranylgeranyl diphosphate synthase
1" species:7955 "Danio rerio" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 ZFIN:ZDB-GENE-030131-8742 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GeneTree:ENSGT00390000010417
EMBL:CU639409 EMBL:CU914439 EMBL:FP017283 IPI:IPI00481673
Ensembl:ENSDART00000097845 ArrayExpress:F1QX12 Bgee:F1QX12
Uniprot:F1QX12
Length = 350
Score = 99 (39.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 129 QCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASL 188
Q I E+TEM+H ASL+ DD+ D + RRG S+ G I + + + L + L
Sbjct: 89 QVIIEVTEMLHNASLLIDDIEDSSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLML 148
Query: 189 KHTEVI 194
+H E +
Sbjct: 149 EHPEAV 154
Score = 70 (29.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 20/74 (27%), Positives = 32/74 (43%)
Query: 238 LGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPA 297
LGL +Q+ DD + S K+ DL G + P + A+ P+ N
Sbjct: 222 LGLYFQIRDDYANLNSKEYSANKSFCEDLTEGKFSFPTIHAIWSHPESTQVQNILRQRTE 281
Query: 298 NVDV---ILEYLGK 308
N+D+ ++YL K
Sbjct: 282 NLDIKRYCVDYLEK 295
>MGI|MGI:1341724 [details] [associations]
symbol:Ggps1 "geranylgeranyl diphosphate synthase 1"
species:10090 "Mus musculus" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISO] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006720 "isoprenoid metabolic
process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 MGI:MGI:1341724
GO:GO:0005737 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 CTD:9453 GeneTree:ENSGT00390000010417
HOGENOM:HOG000169461 HOVERGEN:HBG051729 KO:K00804 OrthoDB:EOG4CG08P
GO:GO:0006720 OMA:LLEPYRY EMBL:AB016044 EMBL:BC069913
IPI:IPI00123594 RefSeq:NP_034412.1 UniGene:Mm.148039
ProteinModelPortal:Q9WTN0 SMR:Q9WTN0 STRING:Q9WTN0
PhosphoSite:Q9WTN0 PaxDb:Q9WTN0 PRIDE:Q9WTN0
Ensembl:ENSMUST00000170957 GeneID:14593 KEGG:mmu:14593
InParanoid:Q9WTN0 NextBio:286348 Bgee:Q9WTN0 CleanEx:MM_GGPS1
Genevestigator:Q9WTN0 GermOnline:ENSMUSG00000021302 Uniprot:Q9WTN0
Length = 300
Score = 96 (38.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 129 QCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASL 188
Q I E+TEM+H ASL+ DD+ D + RRG S+ G I + + + L + +L
Sbjct: 47 QIIIEVTEMLHNASLLIDDIEDSSKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTL 106
Query: 189 KHTEVI 194
H + +
Sbjct: 107 DHPDAV 112
Score = 70 (29.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 25/106 (23%), Positives = 40/106 (37%)
Query: 196 ECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTS 255
E Y KT L + + S +E++ L LGL +Q+ DD +
Sbjct: 142 EEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLL----DTLGLFFQIRDDYANLHSKE 197
Query: 256 ASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDV 301
S K+ DL G + P + A+ P+ N N+D+
Sbjct: 198 YSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENIDI 243
>RGD|1359680 [details] [associations]
symbol:Ggps1 "geranylgeranyl diphosphate synthase 1"
species:10116 "Rattus norvegicus" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISO;ISS] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006720 "isoprenoid metabolic
process" evidence=ISO;ISS] [GO:0008152 "metabolic process"
evidence=ISO] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0033384 "geranyl diphosphate biosynthetic process"
evidence=IEA] [GO:0033386 "geranylgeranyl diphosphate biosynthetic
process" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 RGD:1359680 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 CTD:9453
GeneTree:ENSGT00390000010417 HOGENOM:HOG000169461
HOVERGEN:HBG051729 KO:K00804 OMA:MLAIRLM OrthoDB:EOG4CG08P
GO:GO:0006720 EMBL:AB118237 EMBL:AB118238 EMBL:AB118239
EMBL:AB118240 EMBL:BC090327 IPI:IPI00363014 RefSeq:NP_001007627.1
UniGene:Rn.54975 ProteinModelPortal:Q6F596 SMR:Q6F596 STRING:Q6F596
Ensembl:ENSRNOT00000022483 GeneID:291211 KEGG:rno:291211
UCSC:RGD:1359680 InParanoid:Q6F596 NextBio:632273
ArrayExpress:Q6F596 Genevestigator:Q6F596
GermOnline:ENSRNOG00000016767 Uniprot:Q6F596
Length = 300
Score = 96 (38.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 129 QCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASL 188
Q I E+TEM+H ASL+ DD+ D + RRG S+ G I + + + L + +L
Sbjct: 47 QIIIEVTEMLHNASLLIDDIEDSSKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTL 106
Query: 189 KHTEVI 194
H + +
Sbjct: 107 DHPDAV 112
Score = 70 (29.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 25/106 (23%), Positives = 40/106 (37%)
Query: 196 ECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTS 255
E Y KT L + + S +E++ L LGL +Q+ DD +
Sbjct: 142 EEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLL----DTLGLFFQIRDDYANLHSKE 197
Query: 256 ASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDV 301
S K+ DL G + P + A+ P+ N N+D+
Sbjct: 198 YSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENIDI 243
>TAIR|locus:2089626 [details] [associations]
symbol:AT3G14530 "AT3G14530" species:3702 "Arabidopsis
thaliana" [GO:0004311 "farnesyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:AB023038 KO:K13789 GO:GO:0051501
EMBL:BT010463 IPI:IPI00517639 RefSeq:NP_188071.1 UniGene:At.48659
ProteinModelPortal:Q9LUE1 SMR:Q9LUE1 STRING:Q9LUE1
EnsemblPlants:AT3G14530.1 GeneID:820678 KEGG:ath:AT3G14530
TAIR:At3g14530 InParanoid:Q9LUE1 PhylomeDB:Q9LUE1
ProtClustDB:CLSN2682670 Genevestigator:Q9LUE1 Uniprot:Q9LUE1
Length = 360
Score = 126 (49.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 51/180 (28%), Positives = 87/180 (48%)
Query: 136 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEV 193
EMIH +SLIHDD+ +D+AD RRG + V G +A+LAGD AL+ALA +H V
Sbjct: 135 EMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGD-----ALLALA-FEHMTV 188
Query: 194 IMECYM--QKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDF 251
+ + +K L + + ++GQ ++A+ K +GL + + +
Sbjct: 189 VSSGLVAPEKMIRAVVEL-ARAIGTTGLVAGQMIDLASERLNPDK-VGLEHL---EFIHL 243
Query: 252 TGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHG 311
T+A L A++ + G T + + ++ + + D+ +V E LGK+ G
Sbjct: 244 HKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAG 303
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 39/125 (31%), Positives = 60/125 (48%)
Query: 156 RGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCK 215
R IG+ V G + DL R L+H E I ++ KT A L + +
Sbjct: 208 RAIGTTGLVAGQMI-----DLASERLNPDKVGLEHLEFI---HLHKT---AALLEAAAVL 256
Query: 216 AVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPI 275
V G +E+ L +Y + +GL +Q++DDILD T ++ LGK + D+ G +T P
Sbjct: 257 GVIMGGGTEQEIEKLR-KYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPR 315
Query: 276 LFAME 280
L +E
Sbjct: 316 LIGLE 320
>TIGR_CMR|CPS_1089 [details] [associations]
symbol:CPS_1089 "geranyltranstransferase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_267833.1
ProteinModelPortal:Q487D2 STRING:Q487D2 GeneID:3518499
KEGG:cps:CPS_1089 PATRIC:21465449 OMA:KTCTEIC
BioCyc:CPSY167879:GI48-1171-MONOMER Uniprot:Q487D2
Length = 300
Score = 124 (48.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 65/237 (27%), Positives = 96/237 (40%)
Query: 82 FFKEGVEGKKLC-PTVILLMATALNVCTPELSPN---VLGNTLILDLRRRQQCIAEITEM 137
F +EG + P +I M L + + P + G + DL +A E
Sbjct: 17 FLAAKLEGLTINDPKLIEAMRYGLLIGGKRMRPYLAYITGEAVSADLNDID-AVAGALEC 75
Query: 138 IHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVIM 195
IH SL+HDD+ +DD D RRG + AILAGD L + A LA+ HT +
Sbjct: 76 IHAYSLLHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQTLAFDILAN--HTFSMN 133
Query: 196 ECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTS 255
+ L+ KA Y + LA GKN+ L +L ++L T
Sbjct: 134 QSTAGMPIQ--VKLIQQLVKASGYQGMCGGQALDLAAT-GKNISLG-EL--EVLHSLKTG 187
Query: 256 ASLGKASLTD-LRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHG 311
A L + L + +G +T + E+ QL D+ ++ E LGK G
Sbjct: 188 ALLEASVLMPAMCSGQVTREYKIILSEYAQLIGLAYQVQDDIIDLTSTEEELGKPVG 244
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 30/77 (38%), Positives = 40/77 (51%)
Query: 205 KTAALVSNSCKAVAYLSGQ-REEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASL 263
KT AL+ S A SGQ E + EY + +GLAYQ+ DDI+D T T LGK
Sbjct: 185 KTGALLEASVLMPAMCSGQVTREYKIILSEYAQLIGLAYQVQDDIIDLTSTEEELGKPVG 244
Query: 264 TDLRNGIITAPILFAME 280
+D+ T P L ++
Sbjct: 245 SDIAANKSTYPALLGLQ 261
>UNIPROTKB|F1NHT9 [details] [associations]
symbol:GGPS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0004311 "farnesyltranstransferase activity" evidence=IEA]
[GO:0004337 "geranyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004337
GeneTree:ENSGT00390000010417 OMA:MLAIRLM EMBL:AADN02051945
EMBL:AADN02051946 IPI:IPI00589936 Ensembl:ENSGALT00000004102
Uniprot:F1NHT9
Length = 292
Score = 96 (38.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 129 QCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASL 188
Q I E+TEM+H ASL+ DD+ D++ RRG S+ G I + + L + +L
Sbjct: 42 QVIIEVTEMLHNASLLVDDIEDNSKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTL 101
Query: 189 KHTEVI 194
H + +
Sbjct: 102 DHPDAV 107
Score = 68 (29.0 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 29/139 (20%), Positives = 48/139 (34%)
Query: 198 YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSAS 257
Y KT L + + S ++++ L LGL +Q+ DD + S
Sbjct: 139 YKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLL----NTLGLFFQIRDDYANLHSKEYS 194
Query: 258 LGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDV---ILEYLGKSHGIQR 314
K+ DL G + P + A+ P+ N N+D+ + YL +
Sbjct: 195 ENKSFCEDLTEGKFSFPTIHAIWSKPESTQVQNILRQRTENIDIKKYCVHYLENVGSFEY 254
Query: 315 TTEXXXXXXXXXXXXIDSL 333
T I+SL
Sbjct: 255 TRNTLKELESEAYKQIESL 273
>TAIR|locus:2046283 [details] [associations]
symbol:AT2G18620 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 EMBL:AC006135 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:DQ446520
EMBL:DQ652999 IPI:IPI00544740 PIR:E84566 RefSeq:NP_179452.1
UniGene:At.52813 ProteinModelPortal:Q9ZU77 SMR:Q9ZU77 STRING:Q9ZU77
EnsemblPlants:AT2G18620.1 GeneID:816377 KEGG:ath:AT2G18620
TAIR:At2g18620 InParanoid:Q9ZU77 OMA:YMIGKAN PhylomeDB:Q9ZU77
Genevestigator:Q9ZU77 Uniprot:Q9ZU77
Length = 347
Score = 124 (48.7 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 36/126 (28%), Positives = 63/126 (50%)
Query: 156 RGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCK 215
R IG L+ +G+K ++AG ++ + + +V +E +KTA L+ +
Sbjct: 188 RAIGELAKAIGSK-GLVAGQVVD----LTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATV 242
Query: 216 AVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPI 275
A + G +E + + +GL +Q++DDILD T +S LGK + DL +T P
Sbjct: 243 LGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPK 302
Query: 276 LFAMEE 281
L +E+
Sbjct: 303 LMGLEK 308
Score = 117 (46.2 bits), Expect = 0.00031, P = 0.00031
Identities = 28/54 (51%), Positives = 35/54 (64%)
Query: 136 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALAS 187
EMIH SLIHDD+ +D+ D RRG + V G +A+LAGD LIS A LA+
Sbjct: 124 EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHLAT 177
>UNIPROTKB|C9J6G3 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0004337 "geranyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AL391994 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004337
HOGENOM:HOG000169461 HGNC:HGNC:4249 ChiTaRS:GGPS1 IPI:IPI00946064
ProteinModelPortal:C9J6G3 SMR:C9J6G3 STRING:C9J6G3
Ensembl:ENST00000497327 ArrayExpress:C9J6G3 Bgee:C9J6G3
Uniprot:C9J6G3
Length = 230
Score = 97 (39.2 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 129 QCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASL 188
Q I E+TEM+H ASL+ DD+ D++ RRG S+ G I + + + L + +L
Sbjct: 47 QIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTL 106
Query: 189 KHTEVI 194
H + +
Sbjct: 107 DHPDAV 112
Score = 62 (26.9 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 22/89 (24%), Positives = 35/89 (39%)
Query: 196 ECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTS 255
E Y KT L + + S +E++ L LGL +Q+ DD +
Sbjct: 142 EEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLL----NTLGLFFQIRDDYANLHSKE 197
Query: 256 ASLGKASLTDLRNGIITAPILFAMEEFPQ 284
S K+ DL G + P + A+ P+
Sbjct: 198 YSENKSFCEDLTEGKFSFPTIHAIWSRPE 226
>UNIPROTKB|P22939 [details] [associations]
symbol:ispA "geranyl diphosphate synthase / farnesyl
diphosphate synthase" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IMP] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U82664 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 EMBL:D00694 PIR:JQ0665 RefSeq:NP_414955.1
RefSeq:YP_488713.1 PDB:1RQI PDB:1RQJ PDBsum:1RQI PDBsum:1RQJ
ProteinModelPortal:P22939 SMR:P22939 DIP:DIP-10044N IntAct:P22939
MINT:MINT-1233182 SWISS-2DPAGE:P22939 PRIDE:P22939
EnsemblBacteria:EBESCT00000002132 EnsemblBacteria:EBESCT00000015988
GeneID:12930843 GeneID:945064 KEGG:ecj:Y75_p0409 KEGG:eco:b0421
PATRIC:32115991 EchoBASE:EB0503 EcoGene:EG10508 KO:K00795
OMA:NITEECI ProtClustDB:PRK10581 BioCyc:EcoCyc:FPPSYN-MONOMER
BioCyc:ECOL316407:JW0411-MONOMER BioCyc:MetaCyc:FPPSYN-MONOMER
BRENDA:2.5.1.1 SABIO-RK:P22939 ChEMBL:CHEMBL1075078
EvolutionaryTrace:P22939 Genevestigator:P22939 Uniprot:P22939
Length = 299
Score = 122 (48.0 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 42/134 (31%), Positives = 67/134 (50%)
Query: 149 LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVIMECYMQKTYNKTAA 208
+ D D I L+S G +A + G +AL A KH V ++ + +KT A
Sbjct: 133 VSDRDRISMISELASASG--IAGMCG----GQALDLDAEGKH--VPLDALERIHRHKTGA 184
Query: 209 LVSNSCKAVAYLSGQREEVATLAFE-YGKNLGLAYQLIDDILDFTGTSASLGKASLTDLR 267
L+ + + A +G + A + Y +++GLA+Q+ DDILD G +A+LGK D +
Sbjct: 185 LIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQ 244
Query: 268 NGIITAPILFAMEE 281
G T P L +E+
Sbjct: 245 LGKSTYPALLGLEQ 258
>TAIR|locus:2093832 [details] [associations]
symbol:AT3G29430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AP001309 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:DQ056612 IPI:IPI00540813
RefSeq:NP_189589.1 UniGene:At.53571 ProteinModelPortal:Q9LIA0
SMR:Q9LIA0 STRING:Q9LIA0 EnsemblPlants:AT3G29430.1 GeneID:822604
KEGG:ath:AT3G29430 TAIR:At3g29430 InParanoid:Q9LIA0 OMA:NDRNSAF
PhylomeDB:Q9LIA0 Genevestigator:Q9LIA0 Uniprot:Q9LIA0
Length = 357
Score = 123 (48.4 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 156 RGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCK 215
R + L+ +G K ++AG + + L +V +E +KTAAL+ +
Sbjct: 198 RAVMELAKAIGTK-GLVAGQVTD----LCSQGLNPDDVGLERLEFIHLHKTAALLEAAAV 252
Query: 216 AVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPI 275
A + G EE +Y + +GL +Q++DDILD T ++ LGK + D+ G +T P
Sbjct: 253 LGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMAGKLTYPR 312
Query: 276 LFAME 280
L +E
Sbjct: 313 LIGLE 317
Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 136 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRA 181
EMIH +SLIHDD+ +DDAD RRG + G +A+LAGD L++ A
Sbjct: 132 EMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALA 179
>TAIR|locus:2079028 [details] [associations]
symbol:AT3G32040 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:AP002033 EMBL:BT015110
EMBL:AK221451 IPI:IPI00544436 RefSeq:NP_189747.1 UniGene:At.50761
ProteinModelPortal:Q9LHR4 SMR:Q9LHR4 STRING:Q9LHR4 PRIDE:Q9LHR4
EnsemblPlants:AT3G32040.1 GeneID:822957 KEGG:ath:AT3G32040
TAIR:At3g32040 InParanoid:Q9LHR4 PhylomeDB:Q9LHR4
Genevestigator:Q9LHR4 Uniprot:Q9LHR4
Length = 360
Score = 123 (48.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 31/61 (50%), Positives = 40/61 (65%)
Query: 136 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEV 193
EMIH +SLIHDD+ +DDAD RRG + V G +A+LAGD AL+ALA +H V
Sbjct: 135 EMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGD-----ALLALA-FEHMTV 188
Query: 194 I 194
+
Sbjct: 189 V 189
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 39/128 (30%), Positives = 64/128 (50%)
Query: 156 RGIGSLSSVMGNKLAILAGDL--LISRALVAL-ASLKHTEVIMECYMQKTYNKTAALVSN 212
R + L+ +G K ++AG + L S+ L L+ E I +KTAAL+
Sbjct: 201 RSVTELAKAIGTK-GLVAGQVSDLCSQGLNPYDVGLERLEFIH-------LHKTAALLEA 252
Query: 213 SCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIIT 272
+ A + G EE +YG+ +GL +Q++DDI+D T ++ LGK + D+ +T
Sbjct: 253 AAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGKDVMARKLT 312
Query: 273 APILFAME 280
P L +E
Sbjct: 313 YPRLIGLE 320
>TAIR|locus:2087550 [details] [associations]
symbol:AT3G20160 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AP000383 GO:GO:0016117 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501
ProtClustDB:CLSN2913613 EMBL:DQ446678 EMBL:DQ653096 IPI:IPI00537582
RefSeq:NP_188651.1 UniGene:At.53400 ProteinModelPortal:Q9LJY2
SMR:Q9LJY2 STRING:Q9LJY2 EnsemblPlants:AT3G20160.1 GeneID:821560
KEGG:ath:AT3G20160 TAIR:At3g20160 InParanoid:Q9LJY2 OMA:RSYARCI
PhylomeDB:Q9LJY2 Genevestigator:Q9LJY2 Uniprot:Q9LJY2
Length = 344
Score = 122 (48.0 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 204 NKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASL 263
+KTAAL+ + A + G +E Y + +GL +Q++DD+LD T +S LGK +
Sbjct: 228 HKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAG 287
Query: 264 TDLRNGIITAPILFAMEEFPQLRAFIN 290
DL G +T P L +E+ + +N
Sbjct: 288 KDLIAGKLTYPRLMGVEKSKEYAERLN 314
>UNIPROTKB|P80042 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase,
chloroplastic" species:4072 "Capsicum annuum" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0009507 GO:GO:0009536 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
GO:GO:0006720 EMBL:X80267 PIR:S53722 ProteinModelPortal:P80042
SMR:P80042 BioCyc:MetaCyc:MONOMER-12171 Uniprot:P80042
Length = 369
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 56/177 (31%), Positives = 83/177 (46%)
Query: 123 DLRRRQQCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLIS--- 179
DLRR + +I VA L D +L A + S + V +++ +L S
Sbjct: 166 DLRRGKPTNHKIYGE-DVAVLAGDSLLAFA-FEHIVNSTAGVTPSRIVGAVAELAKSIGT 223
Query: 180 RALVA--LASLKHT---EVIMECYMQKTYNKTAALVSNSCKAVAYLSGQRE-EVATLAFE 233
LVA +A +K T V +E +KTAAL+ +S A L G EV L
Sbjct: 224 EGLVAGQVADIKCTGNASVSLETLEFIHVHKTAALLESSVVLGAILGGGTNVEVEKLR-R 282
Query: 234 YGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFIN 290
+ + +GL +Q++DDILD T +S LGK + DL T P L +E+ + A +N
Sbjct: 283 FARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTTYPKLLGLEKAKEFAAELN 339
>SGD|S000005990 [details] [associations]
symbol:BTS1 "Geranylgeranyl diphosphate synthase"
species:4932 "Saccharomyces cerevisiae" [GO:0004337
"geranyltranstransferase activity" evidence=IEA] [GO:0016117
"carotenoid biosynthetic process" evidence=IEA] [GO:0033386
"geranylgeranyl diphosphate biosynthetic process" evidence=IEA]
[GO:0045337 "farnesyl diphosphate biosynthetic process"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IEA;ISS;IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0004161 "dimethylallyltranstransferase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016114 "terpenoid biosynthetic process" evidence=IGI;IMP;IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 SGD:S000005990
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0015031 EMBL:BK006949 GO:GO:0016114 EMBL:U39205
GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 GeneTree:ENSGT00390000010417
HOGENOM:HOG000169461 KO:K00804 OMA:MLAIRLM OrthoDB:EOG4QVGMM
EMBL:U31632 EMBL:AY692852 PIR:S60921 RefSeq:NP_015256.1 PDB:2DH4
PDB:2E8T PDB:2E8U PDB:2E8V PDB:2E8W PDB:2E8X PDB:2E90 PDB:2E91
PDB:2E92 PDB:2E93 PDB:2E94 PDB:2E95 PDB:2Z4V PDB:2Z4W PDB:2Z4X
PDB:2Z4Y PDB:2Z4Z PDB:2Z50 PDB:2Z52 PDB:2Z78 PDB:2Z7H PDB:2Z7I
PDB:2ZEU PDB:2ZEV PDBsum:2DH4 PDBsum:2E8T PDBsum:2E8U PDBsum:2E8V
PDBsum:2E8W PDBsum:2E8X PDBsum:2E90 PDBsum:2E91 PDBsum:2E92
PDBsum:2E93 PDBsum:2E94 PDBsum:2E95 PDBsum:2Z4V PDBsum:2Z4W
PDBsum:2Z4X PDBsum:2Z4Y PDBsum:2Z4Z PDBsum:2Z50 PDBsum:2Z52
PDBsum:2Z78 PDBsum:2Z7H PDBsum:2Z7I PDBsum:2ZEU PDBsum:2ZEV
ProteinModelPortal:Q12051 SMR:Q12051 IntAct:Q12051 STRING:Q12051
PaxDb:Q12051 EnsemblFungi:YPL069C GeneID:856036 KEGG:sce:YPL069C
CYGD:YPL069c BioCyc:MetaCyc:MONOMER-13701 SABIO-RK:Q12051
ChEMBL:CHEMBL1075251 EvolutionaryTrace:Q12051 NextBio:980968
Genevestigator:Q12051 GermOnline:YPL069C Uniprot:Q12051
Length = 335
Score = 81 (33.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 121 ILDLRRRQQCI-AEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLIS 179
+++L + Q I ++I E++H +SL+ DD+ D+A RRG + + G I + +
Sbjct: 49 VMNLPKDQLAIVSQIVELLHNSSLLIDDIEDNAPLRRGQTTSHLIFGVPSTINTANYMYF 108
Query: 180 RALVALASLKHTE 192
RA+ ++ L E
Sbjct: 109 RAMQLVSQLTTKE 121
Score = 79 (32.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 25/90 (27%), Positives = 40/90 (44%)
Query: 192 EVI--MECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDIL 249
E+I E Y+ NKT L + + + LS +L + LG+ YQ+ DD L
Sbjct: 154 EIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHHGHSLV-PFINLLGIIYQIRDDYL 212
Query: 250 DFTGTSASLGKASLTDLRNGIITAPILFAM 279
+ S K D+ G ++ PI+ A+
Sbjct: 213 NLKDFQMSSEKGFAEDITEGKLSFPIVHAL 242
>TAIR|locus:2121149 [details] [associations]
symbol:GGR "geranylgeranyl reductase" species:3702
"Arabidopsis thaliana" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0004311 "farnesyltranstransferase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00723 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:AL161593 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 EMBL:AL035540
HOGENOM:HOG000009101 KO:K13789 GO:GO:0051501 EMBL:L40577
EMBL:AY057734 EMBL:AF324662 EMBL:AF326906 EMBL:AF339725
EMBL:AF372915 EMBL:AY086829 IPI:IPI00540165 PIR:T05674
RefSeq:NP_195558.1 UniGene:At.20379 ProteinModelPortal:Q39108
SMR:Q39108 IntAct:Q39108 STRING:Q39108 PaxDb:Q39108 PRIDE:Q39108
EnsemblPlants:AT4G38460.1 GeneID:830002 KEGG:ath:AT4G38460
TAIR:At4g38460 InParanoid:Q39108 OMA:SAMRYAV PhylomeDB:Q39108
ProtClustDB:CLSN2685424 Genevestigator:Q39108 GermOnline:AT4G38460
Uniprot:Q39108
Length = 326
Score = 117 (46.2 bits), Expect = 0.00028, P = 0.00028
Identities = 34/106 (32%), Positives = 50/106 (47%)
Query: 136 EMIHVASLIHDDV--LDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEV 193
EM+H ASLIHDD+ +DD RRG S +V G+ +AILAGD L A + S ++
Sbjct: 117 EMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDL 176
Query: 194 IMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLG 239
+ + + + A V ++ A L+F K G
Sbjct: 177 VPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFG 222
>UNIPROTKB|Q4K5A6 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:220664
"Pseudomonas protegens Pf-5" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337
KO:K13789 OMA:DLISEHK RefSeq:YP_262577.1 PDB:3LJI PDB:3LSN PDB:3P41
PDBsum:3LJI PDBsum:3LSN PDBsum:3P41 ProteinModelPortal:Q4K5A6
STRING:Q4K5A6 DNASU:3479897 GeneID:3479897 KEGG:pfl:PFL_5509
PATRIC:19880507 ProtClustDB:CLSK868404
BioCyc:PFLU220664:GIX8-5546-MONOMER EvolutionaryTrace:Q4K5A6
Uniprot:Q4K5A6
Length = 295
Score = 115 (45.5 bits), Expect = 0.00038, P = 0.00038
Identities = 45/142 (31%), Positives = 66/142 (46%)
Query: 142 SLIHDDVLDDADTR---RGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVIMECY 198
S + D L DA R + +L+ G A + G I V L K + +E Y
Sbjct: 122 SALLDPALSDASAEIRLRMVTTLAQAAGP--AGMVGGQAIDLGSVGL---KLDQQALE-Y 175
Query: 199 MQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFE-YGKNLGLAYQLIDDILDFTGTSAS 257
M + +KT AL+ S A SG+ E+ A + Y + +GLA+Q+ DDILD +A+
Sbjct: 176 MHR--HKTGALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTAT 233
Query: 258 LGKASLTDLRNGIITAPILFAM 279
LGK D+ T P L +
Sbjct: 234 LGKRQGADIARDKPTYPALLGL 255
>UNIPROTKB|G4NEM8 [details] [associations]
symbol:MGG_00758 "Geranylgeranyl pyrophosphate synthase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CM001235 GO:GO:0016740 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00804
RefSeq:XP_003718242.1 ProteinModelPortal:G4NEM8 SMR:G4NEM8
EnsemblFungi:MGG_00758T0 GeneID:2674748 KEGG:mgr:MGG_00758
Uniprot:G4NEM8
Length = 412
Score = 91 (37.1 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 129 QCIAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASL 188
+ I + M+H ASL+ DDV D++ RRG+ S+ G I + + + AL L L
Sbjct: 161 ELITHVVGMLHTASLLVDDVEDNSSLRRGLPVAHSIFGVPQTINSANYIYFAALQELKKL 220
Query: 189 KHTEVI 194
+ E +
Sbjct: 221 SNPEAV 226
Score = 66 (28.3 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 28/122 (22%), Positives = 48/122 (39%)
Query: 198 YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNL-GLAYQLIDDILDFTGTSA 256
Y++ NKT L K + S + LA NL GL +Q+ DD +
Sbjct: 258 YLEMVGNKTGGLFRLGIKLMQAESAFPTDCIPLA-----NLIGLIFQIRDDYQNLFSREY 312
Query: 257 SLGKASLTDLRNGIITAPILFAMEEFP---QLRAFINSSSDNPANVDVILEYLGKSHGIQ 313
S K DL G + P++ ++ P QL + + + + + Y+ K+ +
Sbjct: 313 SNNKGMCEDLTEGKFSFPVIHSIRSNPANLQLLNILKQKTTDEGVKNYAVSYMEKTGSFE 372
Query: 314 RT 315
T
Sbjct: 373 YT 374
>TAIR|locus:2048993 [details] [associations]
symbol:GGPS2 "geranylgeranyl pyrophosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=RCA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 EMBL:AC004482 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:U44876
EMBL:BT005328 EMBL:AK117954 EMBL:AY087521 EMBL:D85029
IPI:IPI00535829 PIR:S71230 PIR:T02429 RefSeq:NP_179960.1
UniGene:At.1550 ProteinModelPortal:O04046 SMR:O04046 STRING:O04046
PaxDb:O04046 PRIDE:O04046 EnsemblPlants:AT2G23800.1 GeneID:816912
KEGG:ath:AT2G23800 TAIR:At2g23800 InParanoid:O04046 OMA:QSMKTGA
PhylomeDB:O04046 ProtClustDB:CLSN2912871
BioCyc:ARA:AT2G23800-MONOMER BioCyc:MetaCyc:AT2G23800-MONOMER
Genevestigator:O04046 GermOnline:AT2G23800 Uniprot:O04046
Length = 376
Score = 114 (45.2 bits), Expect = 0.00078, P = 0.00078
Identities = 37/126 (29%), Positives = 60/126 (47%)
Query: 156 RGIGSLSSVMGNKLAILAGDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCK 215
R IG+ V G + I + L ++ L+H E I +KTA L+ +
Sbjct: 224 RSIGTRGLVAGQAMDISSEGLDLNEV-----GLEHLEFIH-------VHKTAVLLETAAV 271
Query: 216 AVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPI 275
A + G +E ++ + +GL +Q++DDILD T +S LGK + D G +T P
Sbjct: 272 LGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPK 331
Query: 276 LFAMEE 281
L +E+
Sbjct: 332 LIGLEK 337
>FB|FBgn0019662 [details] [associations]
symbol:qm "quemao" species:7227 "Drosophila melanogaster"
[GO:0004337 "geranyltranstransferase activity" evidence=ISS]
[GO:0004161 "dimethylallyltranstransferase activity" evidence=ISS]
[GO:0004311 "farnesyltranstransferase activity" evidence=ISS;NAS]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008354 "germ cell migration" evidence=IMP] [GO:0035050
"embryonic heart tube development" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0022008 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0035050 GO:GO:0008354
ChiTaRS:RPL10 FlyBase:FBgn0019662 EMBL:AF049659
ProteinModelPortal:O61539 SMR:O61539 STRING:O61539 PRIDE:O61539
InParanoid:O61539 ArrayExpress:O61539 Bgee:O61539 Uniprot:O61539
Length = 338
Score = 89 (36.4 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 131 IAEITEMIHVASLIHDDVLDDADTRRGIGSLSSVMGNKLAILAGDLLISRALVALASLKH 190
I +I +M+H +SL+ DD+ D++ RRG+ S+ G I A + + AL + L H
Sbjct: 61 IGDIVQMLHNSSLLIDDIEDNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDH 120
Query: 191 TE 192
E
Sbjct: 121 PE 122
Score = 65 (27.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 29/143 (20%), Positives = 54/143 (37%)
Query: 198 YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSAS 257
Y T KT L + + + S +E+ + L LGL +Q+ DD + + +
Sbjct: 156 YKLMTVRKTGGLFMLAIRLMQLFSSNKEDYSKLT----AILGLYFQIRDDYCNLSLKEYT 211
Query: 258 LGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDV------ILEYLGKSHG 311
K+ DL G P++ A+ Q + ++ +++V +LE LG
Sbjct: 212 ENKSFAEDLTEGKFGFPVIHAVRTQKQDKQVLHILRQRTHDIEVKKYCITLLEKLGSFQY 271
Query: 312 IQRTTEXXXXXXXXXXXXIDSLP 334
++ E + S P
Sbjct: 272 TRKVLESLDAEARSEVARLGSNP 294
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 360 348 0.00099 116 3 11 22 0.37 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 98
No. of states in DFA: 598 (64 KB)
Total size of DFA: 202 KB (2115 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.89u 0.14s 26.03t Elapsed: 00:00:01
Total cpu time: 25.90u 0.15s 26.05t Elapsed: 00:00:01
Start: Tue May 21 06:17:48 2013 End: Tue May 21 06:17:49 2013