Query 018157
Match_columns 360
No_of_seqs 209 out of 1186
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 10:50:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018157.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018157hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ani_A Protein GRPE; chaperone 100.0 3.6E-46 1.2E-50 345.1 18.7 152 182-347 62-213 (213)
2 1dkg_A Nucleotide exchange fac 100.0 8.2E-46 2.8E-50 338.8 17.6 155 179-349 42-196 (197)
3 3a6m_A Protein GRPE, HSP-70 co 100.0 3.4E-46 1.2E-50 336.6 8.4 149 182-349 22-170 (177)
4 3swy_A Cyclic nucleotide-gated 84.2 5.6 0.00019 28.5 7.6 41 184-224 3-43 (46)
5 3swf_A CGMP-gated cation chann 80.5 12 0.00042 29.3 8.9 43 184-226 5-47 (74)
6 2v66_B Nuclear distribution pr 74.7 36 0.0012 28.4 14.4 71 179-249 3-75 (111)
7 2v71_A Nuclear distribution pr 72.1 57 0.0019 29.5 14.5 71 179-249 42-128 (189)
8 3tso_C RAB11 family-interactin 65.5 14 0.00048 29.0 5.9 33 170-202 12-44 (75)
9 2l5g_B Putative uncharacterize 65.2 14 0.00046 26.2 5.2 35 172-206 2-36 (42)
10 3nmd_A CGMP dependent protein 63.1 28 0.00096 27.1 7.2 41 173-213 20-60 (72)
11 3ukx_C Bimax2 peptide; arm rep 61.1 3.1 0.00011 26.5 1.1 19 148-166 2-20 (28)
12 3jsv_C NF-kappa-B essential mo 59.8 60 0.0021 26.4 8.9 38 172-209 2-39 (94)
13 2v4h_A NF-kappa-B essential mo 59.7 66 0.0023 26.9 9.3 38 172-209 24-61 (110)
14 3mq7_A Bone marrow stromal ant 59.5 34 0.0012 29.0 7.6 50 168-217 49-102 (121)
15 3ghg_A Fibrinogen alpha chain; 58.7 82 0.0028 32.8 11.7 75 176-251 50-124 (562)
16 3he5_A Synzip1; heterodimeric 56.6 49 0.0017 23.4 6.8 39 179-217 10-48 (49)
17 3etw_A Adhesin A; antiparallel 56.1 24 0.00083 29.8 6.2 37 198-246 69-105 (119)
18 3efg_A Protein SLYX homolog; x 53.2 40 0.0014 26.2 6.6 54 171-224 6-59 (78)
19 4emc_A Monopolin complex subun 49.7 1E+02 0.0035 28.0 9.6 66 168-239 16-81 (190)
20 3nmd_A CGMP dependent protein 47.3 30 0.001 26.9 5.0 33 181-213 35-67 (72)
21 3he4_B Synzip5; heterodimeric 45.9 61 0.0021 22.6 5.8 34 173-210 4-37 (46)
22 3na7_A HP0958; flagellar bioge 44.8 1.8E+02 0.0062 26.4 11.6 48 174-221 34-81 (256)
23 2v71_A Nuclear distribution pr 44.0 1.8E+02 0.0062 26.2 11.5 31 178-208 55-85 (189)
24 2gzd_C RAB11 family-interactin 43.1 9.2 0.00031 31.9 1.6 34 170-203 44-77 (107)
25 3trt_A Vimentin; cytoskeleton, 41.3 90 0.0031 23.3 6.9 18 194-211 57-74 (77)
26 2yy0_A C-MYC-binding protein; 41.2 41 0.0014 24.4 4.7 26 175-200 22-47 (53)
27 3hnw_A Uncharacterized protein 39.8 1.4E+02 0.0049 25.3 8.6 39 180-218 76-114 (138)
28 2jee_A YIIU; FTSZ, septum, coi 36.9 1.5E+02 0.0053 23.3 10.4 64 177-240 11-79 (81)
29 3hnw_A Uncharacterized protein 36.8 1.8E+02 0.0061 24.6 8.8 35 179-213 82-116 (138)
30 2avr_X Adhesion A; antiparalle 36.6 72 0.0025 27.0 6.1 36 198-245 69-104 (119)
31 3t98_B Nucleoporin NUP58/NUP45 36.2 1.1E+02 0.0036 24.6 6.8 50 170-219 42-91 (93)
32 1d7m_A Cortexillin I; coiled-c 34.6 1.4E+02 0.0048 24.3 7.2 48 169-216 15-62 (101)
33 4etp_A Kinesin-like protein KA 34.3 1.3E+02 0.0045 29.5 8.6 15 281-295 131-145 (403)
34 1zxa_A CGMP-dependent protein 33.6 60 0.002 24.8 4.7 26 174-199 13-38 (67)
35 1j1d_B Troponin T, TNT; THIN f 33.4 1.8E+02 0.0061 23.9 7.9 49 168-216 38-86 (106)
36 2yy0_A C-MYC-binding protein; 33.1 76 0.0026 22.9 5.0 30 188-217 21-50 (53)
37 1gd2_E Transcription factor PA 32.3 70 0.0024 24.5 4.9 11 148-158 11-21 (70)
38 3na7_A HP0958; flagellar bioge 31.8 2.6E+02 0.0087 25.4 9.6 37 271-311 176-217 (256)
39 3plt_A Sphingolipid long chain 30.9 3.3E+02 0.011 25.3 11.6 60 191-250 136-195 (234)
40 1gmj_A ATPase inhibitor; coile 30.7 1.7E+02 0.0058 23.3 7.0 17 199-215 57-73 (84)
41 3mq7_A Bone marrow stromal ant 29.3 1.5E+02 0.005 25.2 6.7 37 180-216 72-108 (121)
42 3mq9_A Bone marrow stromal ant 27.7 95 0.0033 30.1 6.3 23 175-197 400-422 (471)
43 2eqb_B RAB guanine nucleotide 27.4 2.5E+02 0.0086 22.8 8.4 50 175-224 8-60 (97)
44 1ytz_T Troponin T; muscle, THI 26.7 1.9E+02 0.0064 23.8 6.9 47 169-215 39-85 (107)
45 4ani_A Protein GRPE; chaperone 26.6 3.7E+02 0.013 24.5 10.4 47 176-222 63-113 (213)
46 3htk_A Structural maintenance 26.4 1.7E+02 0.0059 20.6 8.1 46 177-222 10-55 (60)
47 1u2m_A Histone-like protein HL 26.1 49 0.0017 27.2 3.4 50 196-245 63-112 (143)
48 1p9i_A Cortexillin I/GCN4 hybr 26.0 96 0.0033 20.1 3.9 24 175-198 2-25 (31)
49 2zvf_A Alanyl-tRNA synthetase; 25.9 82 0.0028 26.5 4.8 15 198-212 30-44 (171)
50 1uix_A RHO-associated kinase; 25.6 2.3E+02 0.0079 21.8 10.4 41 192-233 24-64 (71)
51 1s1c_X RHO-associated, coiled- 25.4 2.3E+02 0.008 21.8 10.1 56 177-233 4-64 (71)
52 3f6n_A Virion-associated prote 25.2 1.7E+02 0.0058 25.0 6.4 51 192-242 8-60 (129)
53 4etp_A Kinesin-like protein KA 25.0 1.5E+02 0.0052 29.1 7.2 13 211-223 45-57 (403)
54 2zqm_A Prefoldin beta subunit 25.0 2.4E+02 0.0083 21.9 7.2 43 173-218 67-109 (117)
55 2wt7_B Transcription factor MA 24.8 2.3E+02 0.0079 22.7 6.9 35 183-217 52-86 (90)
56 3u06_A Protein claret segregat 23.9 2.3E+02 0.0078 28.0 8.2 15 281-295 129-143 (412)
57 1l8d_A DNA double-strand break 23.2 2.6E+02 0.009 21.8 7.1 38 179-216 64-101 (112)
58 3oja_B Anopheles plasmodium-re 23.0 1.8E+02 0.0062 28.7 7.4 28 175-202 505-532 (597)
59 2jee_A YIIU; FTSZ, septum, coi 22.8 2.8E+02 0.0097 21.8 7.7 23 197-219 52-74 (81)
60 2xv5_A Lamin-A/C; structural p 22.3 2.7E+02 0.0091 21.3 8.5 18 207-224 36-53 (74)
61 1gk6_A Vimentin; intermediate 21.9 2.3E+02 0.0079 20.5 6.2 18 207-224 31-48 (59)
62 3vkg_A Dynein heavy chain, cyt 21.8 4.5E+02 0.015 33.0 11.6 50 169-218 1931-1980(3245)
63 3kin_B Kinesin heavy chain; mo 21.5 1.5E+02 0.0052 24.3 5.4 29 173-201 83-111 (117)
64 2dfs_A Myosin-5A; myosin-V, in 21.0 6.9E+02 0.024 27.7 12.1 30 187-216 985-1014(1080)
65 3u06_A Protein claret segregat 20.9 3.5E+02 0.012 26.6 8.9 25 192-216 16-40 (412)
No 1
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=100.00 E-value=3.6e-46 Score=345.09 Aligned_cols=152 Identities=36% Similarity=0.568 Sum_probs=141.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhHHHHHhcchhhhcccCCCCCC
Q 018157 182 KEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSND 261 (360)
Q Consensus 182 ~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~flkdLLpVlDnLERAl~~~~e~~ski~~s~d 261 (360)
..++..|+.+++++++++|+|+|++|||+|||||++||++.+++||+++|+++||||+|||+||+.+.+.
T Consensus 62 ~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~rE~e~~~~~a~e~~~~~LLpVlDnlerAl~~~~~---------- 131 (213)
T 4ani_A 62 AAAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVLDNFERALKIETD---------- 131 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHSCCSC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhccc----------
Confidence 3445567788899999999999999999999999999999999999999999999999999999986532
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEEeeee
Q 018157 262 TAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPA 341 (360)
Q Consensus 262 ~~~a~~~lksl~eGVeMI~kqL~kvL~k~GVe~Ie~vGepFDP~lHEAV~~v~s~e~~~gtVveVvQkGY~L~dRVLRPA 341 (360)
+..+.+|++||+||+++|.++|.++||++|+++|++|||++|+||+++++++.++|||++|+|+||+|+|||||||
T Consensus 132 ----~~~~~~l~eGvemi~k~l~~~L~k~Gv~~I~~~Ge~FDP~~HeAv~~v~~~~~~~gtVv~V~qkGY~l~dRVLRpA 207 (213)
T 4ani_A 132 ----NEQAKSILQGMEMVYRSLVDALKKEGVEAIEAVGKPFDPYLHQAVMQAEAEGYEPNTVVEELQKGYKLKDRVLRPA 207 (213)
T ss_dssp ----CSTHHHHHHHHHHHHHHHHHHHHHTTEECCCCSSSCCCTTTEEEEEEECCSSSCSSSEEEEEECCCEETTSCCSCE
T ss_pred ----cccHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCHHHceeeeeecCCCCCCCcEEEEEeCCeEECCEEeece
Confidence 1235789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEec
Q 018157 342 EVGVTQ 347 (360)
Q Consensus 342 ~VvVsK 347 (360)
||+|++
T Consensus 208 ~V~Va~ 213 (213)
T 4ani_A 208 MVKVSQ 213 (213)
T ss_dssp EEEEEC
T ss_pred EEEeCC
Confidence 999985
No 2
>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1
Probab=100.00 E-value=8.2e-46 Score=338.81 Aligned_cols=155 Identities=36% Similarity=0.555 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhHHHHHhcchhhhcccCCC
Q 018157 179 KLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDP 258 (360)
Q Consensus 179 k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~flkdLLpVlDnLERAl~~~~e~~ski~~ 258 (360)
..+++++++++++++ +++|+|+|++|||+|||||+++|++++++||+++|+++||||+|||+||+.+....
T Consensus 42 ~~~~~l~~~l~e~~~---~~~d~~lR~~Ae~eN~rkR~~ke~~~~~~~a~~~~~~~LLpv~DnlerAl~~~~~~------ 112 (197)
T 1dkg_A 42 EKVANLEAQLAEAQT---RERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKA------ 112 (197)
T ss_dssp HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSGGGHHHHSHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhccc------
Confidence 344454444444433 46789999999999999999999999999999999999999999999999865310
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEEe
Q 018157 259 SNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVI 338 (360)
Q Consensus 259 s~d~~~a~~~lksl~eGVeMI~kqL~kvL~k~GVe~Ie~vGepFDP~lHEAV~~v~s~e~~~gtVveVvQkGY~L~dRVL 338 (360)
++.+++|++||+||+++|.++|+++||++|+++|++|||++|+||+++++++.++|||++|+|+||+|+||||
T Consensus 113 -------~~~~~~l~~Gv~~~~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~~tVv~v~qkGY~l~dRvL 185 (197)
T 1dkg_A 113 -------NPDMSAMVEDIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTI 185 (197)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHTTTTEEEECCCSSBCCTTSEEEEEEEECSSSCTTBEEEEEECEEEETTEEE
T ss_pred -------cchHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCHHHhheeeeecCCCCCcCeEEEEeeCCeeeCCEEe
Confidence 1235789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEEecCC
Q 018157 339 RPAEVGVTQAV 349 (360)
Q Consensus 339 RPA~VvVsK~~ 349 (360)
|||+|+|++++
T Consensus 186 RpA~V~V~~~~ 196 (197)
T 1dkg_A 186 RAAMVTVAKAK 196 (197)
T ss_dssp ECEEEEEEECC
T ss_pred cceEEEecCCC
Confidence 99999999854
No 3
>3a6m_A Protein GRPE, HSP-70 cofactor; coiled-coil, four-helix bundle, dimer, chaperone, STRE response; 3.23A {Thermus thermophilus}
Probab=100.00 E-value=3.4e-46 Score=336.60 Aligned_cols=149 Identities=33% Similarity=0.495 Sum_probs=137.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhHHHHHhcchhhhcccCCCCCC
Q 018157 182 KEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSND 261 (360)
Q Consensus 182 ~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~flkdLLpVlDnLERAl~~~~e~~ski~~s~d 261 (360)
..+++.++.+++++++++++|+|++|||+|||||+++|++++++||+++|+++||||+|||+||+.+...
T Consensus 22 ~~l~~~~~~l~~e~~e~~d~~lR~~Ae~eN~rkR~~rE~e~~~~~a~e~~~~~LLpVlDnlerAl~~~~~---------- 91 (177)
T 3a6m_A 22 QALEERLKAAEEELKGLKDKYLRLLADFDNYRKRMEEELKAREREGVLKALRALLPVLDDLDRALEFAEA---------- 91 (177)
T ss_dssp SSTTTSTTGGGGTSSSHHHHHHTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGG----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhc----------
Confidence 3334456667788999999999999999999999999999999999999999999999999999986431
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEEeeee
Q 018157 262 TAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPA 341 (360)
Q Consensus 262 ~~~a~~~lksl~eGVeMI~kqL~kvL~k~GVe~Ie~vGepFDP~lHEAV~~v~s~e~~~gtVveVvQkGY~L~dRVLRPA 341 (360)
.+++|++||+||+++|.++|+++||++|+++|++|||++|+||+++++ ++|||++|+|+||+|+|||||||
T Consensus 92 ------~~~~l~~Gv~m~~~~l~~~L~k~Gv~~i~~~Ge~FDP~~HeAv~~~~~---~~gtVv~v~qkGY~l~dRvLRpA 162 (177)
T 3a6m_A 92 ------SPESIRQGVRAIRDGFFRILAGLGVEEVPGEGEAFDPRYHEAVGLLPG---EPGKVAKVFQRGFRMGEALVRPA 162 (177)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHTTCEECCCTTSBCCTTTEEEEEEEES---STTBEEEEEECCEEETTEEEECE
T ss_pred ------cHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCHHHhhhhhcccC---CcCeEEEEeecCeeeCCEEecCe
Confidence 146899999999999999999999999999999999999999999987 89999999999999999999999
Q ss_pred EEEEecCC
Q 018157 342 EVGVTQAV 349 (360)
Q Consensus 342 ~VvVsK~~ 349 (360)
+|+|++++
T Consensus 163 ~V~V~~~~ 170 (177)
T 3a6m_A 163 RVAVGEEK 170 (177)
T ss_dssp EEEEEECC
T ss_pred EEEEeCCC
Confidence 99999976
No 4
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=84.21 E-value=5.6 Score=28.53 Aligned_cols=41 Identities=15% Similarity=0.179 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSK 224 (360)
Q Consensus 184 ~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~rE~e~ak 224 (360)
+|+.+..++.-++-|+.++.|+.|||+....++.+-+..+.
T Consensus 3 lEekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE 43 (46)
T 3swy_A 3 LEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLE 43 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777788899999999999999999888877666543
No 5
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=80.51 E-value=12 Score=29.27 Aligned_cols=43 Identities=21% Similarity=0.322 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKF 226 (360)
Q Consensus 184 ~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~rE~e~akk~ 226 (360)
+|+.+..++.-++-|+-++.|++|+|+....++++-+..+..+
T Consensus 5 lEEKv~~LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE~~ 47 (74)
T 3swf_A 5 LEEKVTRMESSVDLLQTRFARILAEYESMQQKLKQRLTKVEKF 47 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556667778888999999999999999998888877666543
No 6
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=74.70 E-value=36 Score=28.38 Aligned_cols=71 Identities=13% Similarity=0.186 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhHHhHHHHHhcch
Q 018157 179 KLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSK--KFAIQNFAKALLDVADNLGRASSVV 249 (360)
Q Consensus 179 k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~rE~e~ak--k~Aie~flkdLLpVlDnLERAl~~~ 249 (360)
|...++......+.-+++.|+.+|.....+--...-.+++|+...+ ......-+++|=-.-|+|+|+-.+.
T Consensus 3 k~~rdL~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t 75 (111)
T 2v66_B 3 QRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRAT 75 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 3455566667778889999999999999998888888888888776 4456677888888899999997654
No 7
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=72.12 E-value=57 Score=29.50 Aligned_cols=71 Identities=21% Similarity=0.305 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HH--HHHHHHHHHHhhhHHhHH
Q 018157 179 KLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAEN--------------SK--KFAIQNFAKALLDVADNL 242 (360)
Q Consensus 179 k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~rE~e~--------------ak--k~Aie~flkdLLpVlDnL 242 (360)
.+.++++..|...++++.+++.++.++.-|.+.+|.+...-..+ .+ ......-+.+|=-.-|+|
T Consensus 42 ELE~ELE~eL~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdl 121 (189)
T 2v71_A 42 ELEAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDL 121 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 34566666677777777777777777777777776665444333 22 223344456666677888
Q ss_pred HHHhcch
Q 018157 243 GRASSVV 249 (360)
Q Consensus 243 ERAl~~~ 249 (360)
+|+..+.
T Consensus 122 Er~~R~~ 128 (189)
T 2v71_A 122 ERAKRAT 128 (189)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8886654
No 8
>3tso_C RAB11 family-interacting protein 2; RAS GTPase fold (RAB25), vesicle trafficking, endosome, PROT transport; HET: GNP; 1.80A {Homo sapiens} PDB: 2k6s_A
Probab=65.54 E-value=14 Score=29.04 Aligned_cols=33 Identities=21% Similarity=0.472 Sum_probs=26.1
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 170 IELSRDDLVKLLKEREELLMAKNEEMKQMQDKV 202 (360)
Q Consensus 170 ~~ls~dEL~k~l~e~Ee~Le~l~~eleelkDk~ 202 (360)
..+|.+||.+++-.++..|...+.++.+|+|.+
T Consensus 12 ~~ltreELi~l~lk~~~~l~~k~~~v~eLEdYI 44 (75)
T 3tso_C 12 RSLTYEEVLQELVKHKELLRRKDTHIRELEDYI 44 (75)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568999999998888888887777777666543
No 9
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=65.20 E-value=14 Score=26.16 Aligned_cols=35 Identities=11% Similarity=0.292 Sum_probs=28.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 172 LSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSF 206 (360)
Q Consensus 172 ls~dEL~k~l~e~Ee~Le~l~~eleelkDk~lR~~ 206 (360)
++.|||.+.+.....++...+++|.+++.++.-+.
T Consensus 2 ~tk~~l~qkI~kVdrEI~Kte~kI~~lqkKlkeLe 36 (42)
T 2l5g_B 2 LSKEELIQNMDRVDREITMVEQQISKLKKKQQQLE 36 (42)
T ss_dssp CSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57789998888888888888888888887765543
No 10
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=63.06 E-value=28 Score=27.10 Aligned_cols=41 Identities=17% Similarity=0.177 Sum_probs=24.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 173 SRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVK 213 (360)
Q Consensus 173 s~dEL~k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~R 213 (360)
+..+|...+.++.++|..++..|+++..++...-+++.+++
T Consensus 20 ti~eLq~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~Lq 60 (72)
T 3nmd_A 20 SLRDLQYALQEKIEELRQRDALIDELELELDQKDELIQMLQ 60 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777777766666666666666665555554444444443
No 11
>3ukx_C Bimax2 peptide; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding, protein transport-IN complex; 2.20A {Mus musculus}
Probab=61.07 E-value=3.1 Score=26.52 Aligned_cols=19 Identities=42% Similarity=0.513 Sum_probs=11.5
Q ss_pred hhhhcccccccccCCCCcc
Q 018157 148 KRRRRVSKQTAFSDSDSDS 166 (360)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~ 166 (360)
.||||+++.+|.-+.|+|-
T Consensus 2 srrrrrrkrkrewdddddp 20 (28)
T 3ukx_C 2 SRRRRRRKRKREWDDDDDP 20 (28)
T ss_dssp ----CCCCCCCCCCCSSSC
T ss_pred chhHHHHHhhcccccCCCc
Confidence 4778888888987776654
No 12
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=59.76 E-value=60 Score=26.44 Aligned_cols=38 Identities=26% Similarity=0.396 Sum_probs=24.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 172 LSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEM 209 (360)
Q Consensus 172 ls~dEL~k~l~e~Ee~Le~l~~eleelkDk~lR~~AEf 209 (360)
+..++|...+...++.|..++.++.+|++...+..++.
T Consensus 2 ~~~~~L~~~L~~aEeaL~~kq~~id~lke~~~q~~~~~ 39 (94)
T 3jsv_C 2 MQLEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKIVM 39 (94)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 34567777777777777777777777766555554443
No 13
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=59.72 E-value=66 Score=26.89 Aligned_cols=38 Identities=26% Similarity=0.396 Sum_probs=27.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 172 LSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEM 209 (360)
Q Consensus 172 ls~dEL~k~l~e~Ee~Le~l~~eleelkDk~lR~~AEf 209 (360)
+..++|...+...|+.|..+..++++++....+..+++
T Consensus 24 ~ei~~L~~~L~~AEeaL~~Kq~~idelk~ei~q~~~~l 61 (110)
T 2v4h_A 24 MQLEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKIVM 61 (110)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35688887777778888888778877777666555533
No 14
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=59.48 E-value=34 Score=29.05 Aligned_cols=50 Identities=14% Similarity=0.190 Sum_probs=36.0
Q ss_pred hhhcCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 168 SEIELSRDDLVKLLKER----EELLMAKNEEMKQMQDKVLRSFAEMENVKDRTI 217 (360)
Q Consensus 168 ~e~~ls~dEL~k~l~e~----Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~ 217 (360)
..|..++..|...+.+. .+++++++.+|..|+.++.-+.|+.+-+|+-.+
T Consensus 49 aTCNqTV~tL~~SL~~ekaq~q~~vqeLqgEI~~Lnq~Lq~a~ae~erlr~~~~ 102 (121)
T 3mq7_A 49 ATANHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQ 102 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Confidence 45666777665444433 334788888999999999999999988877654
No 15
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=58.71 E-value=82 Score=32.82 Aligned_cols=75 Identities=12% Similarity=0.106 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhHHHHHhcchhh
Q 018157 176 DLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKE 251 (360)
Q Consensus 176 EL~k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~flkdLLpVlDnLERAl~~~~e 251 (360)
+|+.+|.+.+..+...=++|....+.|.+...+.++|-+-+-.++......+. ..-..+-.|.++|++-+..++.
T Consensus 50 rLQglLdkqErDltkrINELKnqLEdlsKnsKdseqy~k~~~E~Lr~rq~q~~-dNdNtynE~S~ELRRrIqyLKe 124 (562)
T 3ghg_A 50 RMKGLIDEVNQDFTNRINKLKNSLFEYQKNNKDSHSLTTNIMEILRGDFSSAN-NRDNTYNRVSEDLRSRIEVLKR 124 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTSSHHHHHH-HHHHHHHHTTHHHHHHHHHHHH
T ss_pred chhhhHHhhcCcHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhh-ccchhHHHHHHHHHHHHHHHHH
Confidence 34444444343333322233333333455555555554444433332222222 2222344455666666666553
No 16
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=56.63 E-value=49 Score=23.40 Aligned_cols=39 Identities=10% Similarity=0.032 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 179 KLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTI 217 (360)
Q Consensus 179 k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~ 217 (360)
..++.++.+-+.+++.--.-+|-..++..++.|+|+.++
T Consensus 10 nevaslenenetlkkknlhkkdliaylekeianlrkkie 48 (49)
T 3he5_A 10 NEVASLENENETLKKKNLHKKDLIAYLEKEIANLRKKIE 48 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhhcccHHHHHhcccHHHHHHHHHHHHHHHHHHhc
Confidence 334444444444444444445666777788888888753
No 17
>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A
Probab=56.14 E-value=24 Score=29.79 Aligned_cols=37 Identities=14% Similarity=0.182 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhHHHHHh
Q 018157 198 MQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRAS 246 (360)
Q Consensus 198 lkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~flkdLLpVlDnLERAl 246 (360)
+++.|..+.+++.++++-++.++.... .|+|+|+++-
T Consensus 69 yk~~y~~l~k~Y~~~~keLd~~ik~qe------------kiIdnFE~ik 105 (119)
T 3etw_A 69 YKSQYQELASKYEDALKKLEAEMEQQK------------AVISDFEKIQ 105 (119)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHH
Confidence 456777777777777777776655443 4788888763
No 18
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=53.25 E-value=40 Score=26.22 Aligned_cols=54 Identities=11% Similarity=0.049 Sum_probs=40.9
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 171 ELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSK 224 (360)
Q Consensus 171 ~ls~dEL~k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~rE~e~ak 224 (360)
.+..+++...+.++|..+.-.+.-+++|.+-+.+.+.+++-+++++..=.++.+
T Consensus 6 ~~~~~~le~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~ 59 (78)
T 3efg_A 6 SPRDQELEARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDLG 59 (78)
T ss_dssp --CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567777888888888888888999999999888888888887765554444
No 19
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=49.67 E-value=1e+02 Score=27.98 Aligned_cols=66 Identities=29% Similarity=0.288 Sum_probs=38.7
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 018157 168 SEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVA 239 (360)
Q Consensus 168 ~e~~ls~dEL~k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~flkdLLpVl 239 (360)
..+++-+..|...+..+.+.|+.+..+++.|+.++.-+.++..-+.-+..++.+.+. +..||+..+
T Consensus 16 ~~ad~LV~~L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~~~~~~~~~~~~~e~i~------i~~DL~e~L 81 (190)
T 4emc_A 16 DSADLLVANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVKELKTQTSQQAENSE------VIKDLYEYL 81 (190)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHhhh------HHHHHHHHc
Confidence 345566677776666777777777777777777777766666545445544444433 455554433
No 20
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=47.34 E-value=30 Score=26.90 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 181 LKEREELLMAKNEEMKQMQDKVLRSFAEMENVK 213 (360)
Q Consensus 181 l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~R 213 (360)
+..+++.|+.+++++.+..+.+..++-+++.||
T Consensus 35 Lr~kd~~I~eLEk~L~ekd~eI~~LqseLDKfr 67 (72)
T 3nmd_A 35 LRQRDALIDELELELDQKDELIQMLQNELDKYR 67 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 455556666666666666666666666666664
No 21
>3he4_B Synzip5; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=45.90 E-value=61 Score=22.65 Aligned_cols=34 Identities=26% Similarity=0.454 Sum_probs=22.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 173 SRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEME 210 (360)
Q Consensus 173 s~dEL~k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfE 210 (360)
+..||+..+.+++ +...+++.+++.+.-+.|+++
T Consensus 4 tvkelknyiqele----ernaelknlkehlkfakaele 37 (46)
T 3he4_B 4 TVKELKNYIQELE----ERNAELKNLKEHLKFAKAELE 37 (46)
T ss_dssp CHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH----HHhHHHHhHHHHHHHHHHHHH
Confidence 5667777776654 445667777777777777654
No 22
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=44.83 E-value=1.8e+02 Score=26.39 Aligned_cols=48 Identities=8% Similarity=0.140 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 174 RDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAE 221 (360)
Q Consensus 174 ~dEL~k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~rE~e 221 (360)
.++|...++.+...+..++.++.+++..+.++..+.+.++.|..+...
T Consensus 34 l~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ri~~~~~ 81 (256)
T 3na7_A 34 LDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQK 81 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555556666666666666666666666666666655554443
No 23
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=44.04 E-value=1.8e+02 Score=26.18 Aligned_cols=31 Identities=10% Similarity=0.132 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 178 VKLLKEREELLMAKNEEMKQMQDKVLRSFAE 208 (360)
Q Consensus 178 ~k~l~e~Ee~Le~l~~eleelkDk~lR~~AE 208 (360)
.+.+..+...+..+..++..++++|.....+
T Consensus 55 Ek~~~~L~~~~~~L~~E~e~~k~K~~~~~~e 85 (189)
T 2v71_A 55 EQRNRDLQADNQRLKYEVEALKEKLEHQYAQ 85 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555666666666666655444
No 24
>2gzd_C RAB11 family-interacting protein 2; G protein folds, A-helical coiled coil, protein transport; HET: GTP; 2.44A {Homo sapiens} SCOP: h.1.31.1 PDB: 2gzh_B* 2k6s_A
Probab=43.14 E-value=9.2 Score=31.86 Aligned_cols=34 Identities=21% Similarity=0.419 Sum_probs=9.5
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 170 IELSRDDLVKLLKEREELLMAKNEEMKQMQDKVL 203 (360)
Q Consensus 170 ~~ls~dEL~k~l~e~Ee~Le~l~~eleelkDk~l 203 (360)
..++.+||.+++-+++++|...+.++.+|+|.+-
T Consensus 44 ~~lTrdELI~lllk~e~~l~~kd~~IrELEDYID 77 (107)
T 2gzd_C 44 RSLTYEEVLQELVKHKELLRRKDTHIRELEDYID 77 (107)
T ss_dssp -------------------CCHHHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999998888888777777666655443
No 25
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=41.26 E-value=90 Score=23.28 Aligned_cols=18 Identities=17% Similarity=0.200 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 018157 194 EMKQMQDKVLRSFAEMEN 211 (360)
Q Consensus 194 eleelkDk~lR~~AEfEN 211 (360)
++.+++-.+.++.+|+++
T Consensus 57 Ei~elrr~iq~L~~el~s 74 (77)
T 3trt_A 57 ESTEYRRQVQSLTMEVDA 74 (77)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 333333333333333333
No 26
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=41.19 E-value=41 Score=24.35 Aligned_cols=26 Identities=31% Similarity=0.179 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 175 DDLVKLLKEREELLMAKNEEMKQMQD 200 (360)
Q Consensus 175 dEL~k~l~e~Ee~Le~l~~eleelkD 200 (360)
+.|+..++++..+++.+.+++++++.
T Consensus 22 eaLk~E~~eLk~k~~~L~~~~~el~~ 47 (53)
T 2yy0_A 22 ELLRLELAEMKEKYEAIVEENKKLKA 47 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444444444443
No 27
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=39.76 E-value=1.4e+02 Score=25.26 Aligned_cols=39 Identities=8% Similarity=0.133 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 180 LLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIR 218 (360)
Q Consensus 180 ~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~r 218 (360)
....++..++++.+++.+|+..+..++-.+++.++-..+
T Consensus 76 ~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~ 114 (138)
T 3hnw_A 76 MADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKE 114 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666667777777777777777666666655443
No 28
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=36.90 E-value=1.5e+02 Score=23.34 Aligned_cols=64 Identities=19% Similarity=0.203 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH--HHHHHHHHHHhhhHHh
Q 018157 177 LVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDR---TIREAENSK--KFAIQNFAKALLDVAD 240 (360)
Q Consensus 177 L~k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR---~~rE~e~ak--k~Aie~flkdLLpVlD 240 (360)
|...+...-+.+..++-++++|+++...+..+.+..+.. +.++.++.+ ..+.+.=+..||.-+|
T Consensus 11 LE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LLgk~e 79 (81)
T 2jee_A 11 LEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRME 79 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 334444444455666778888888887777777665443 333333333 2334445555554443
No 29
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=36.83 E-value=1.8e+02 Score=24.64 Aligned_cols=35 Identities=17% Similarity=0.186 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 179 KLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVK 213 (360)
Q Consensus 179 k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~R 213 (360)
..+.+++.++..++.++..++.++--+..+.+.++
T Consensus 82 ~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~ 116 (138)
T 3hnw_A 82 LDIENKDKEIYDLKHELIAAQIKAESSAKEIKELK 116 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333333333333333333
No 30
>2avr_X Adhesion A; antiparallel helix-loop-helix, leucine chain; HET: FLC; 1.90A {Fusobacterium nucleatum} PDB: 3etw_A 2gkq_A 2bc6_A 3etx_A 3ety_A 2gld_A 3etz_A 2gl2_A
Probab=36.57 E-value=72 Score=26.97 Aligned_cols=36 Identities=14% Similarity=0.185 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhHHHHH
Q 018157 198 MQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRA 245 (360)
Q Consensus 198 lkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~flkdLLpVlDnLERA 245 (360)
+++.|.-+...|.++++-+.+++.... .|||+|+..
T Consensus 69 yK~eY~~L~KkYk~~~~~Ld~eI~~qe------------~iI~nFe~I 104 (119)
T 2avr_X 69 YKSQYQELASKYEDALKKLEAEMEQQK------------AVISDFEKI 104 (119)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHH
Confidence 466777888888888888877765544 467777754
No 31
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=36.19 E-value=1.1e+02 Score=24.63 Aligned_cols=50 Identities=8% Similarity=0.149 Sum_probs=38.8
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 170 IELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIRE 219 (360)
Q Consensus 170 ~~ls~dEL~k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~rE 219 (360)
..+++.+|..-+...-+..-.+-.+++.+-+.+.+...+|-|+||+.-++
T Consensus 42 ~~~Tpq~L~~~l~~~h~~FiaLAa~l~~lH~~V~~~Ke~Yl~~rr~~~~d 91 (93)
T 3t98_B 42 SHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKEQYLSYRKMFLGD 91 (93)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 45778888877777777777777888888888888888888888876543
No 32
>1d7m_A Cortexillin I; coiled-coil, coiled-coil trigger site, alpha helix, dimeriza contractIle protein; 2.70A {Dictyostelium discoideum} SCOP: h.1.10.1
Probab=34.65 E-value=1.4e+02 Score=24.32 Aligned_cols=48 Identities=17% Similarity=0.225 Sum_probs=30.5
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 169 EIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRT 216 (360)
Q Consensus 169 e~~ls~dEL~k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~ 216 (360)
...+|.++|.++-.+++..|..++.+.+.-..++.-++|-++..-|-+
T Consensus 15 ~EK~S~eeL~kQk~eL~~~l~~l~~e~~~R~~~i~el~akidd~Lk~l 62 (101)
T 1d7m_A 15 SEKVSREQLIKQKDQLNSLLASLESEGAEREKRLRELEAKLDETLKNL 62 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 455677888877777777777776666655555555555555444433
No 33
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=34.32 E-value=1.3e+02 Score=29.50 Aligned_cols=15 Identities=13% Similarity=0.337 Sum_probs=9.6
Q ss_pred HHHHHHHHhCCCeee
Q 018157 281 KQLGEVFKKFGVEKF 295 (360)
Q Consensus 281 kqL~kvL~k~GVe~I 295 (360)
..+..+|..+.+.-|
T Consensus 131 ~lv~~~l~G~N~tif 145 (403)
T 4etp_A 131 QLVQSSLDGYNVAIF 145 (403)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHhCCcceEEE
Confidence 456677777766554
No 34
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=33.60 E-value=60 Score=24.85 Aligned_cols=26 Identities=19% Similarity=0.387 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 174 RDDLVKLLKEREELLMAKNEEMKQMQ 199 (360)
Q Consensus 174 ~dEL~k~l~e~Ee~Le~l~~eleelk 199 (360)
++++.+.+..+++.+.+++..+.+-.
T Consensus 13 ~e~~~~~i~~Kde~I~eLE~~L~~kd 38 (67)
T 1zxa_A 13 EEDFAKILMLKEERIKELEKRLSEKE 38 (67)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 45555555665555555554444333
No 35
>1j1d_B Troponin T, TNT; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.1 PDB: 1j1e_B
Probab=33.41 E-value=1.8e+02 Score=23.89 Aligned_cols=49 Identities=20% Similarity=0.197 Sum_probs=34.0
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 168 SEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRT 216 (360)
Q Consensus 168 ~e~~ls~dEL~k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~ 216 (360)
+-+.++.++|..++.++=+.|..++++-=++..++.+.--|+..++.|.
T Consensus 38 ~id~l~~~~L~e~~keLh~~I~~LEeEKYDlE~kv~kq~yEI~eL~~rV 86 (106)
T 1j1d_B 38 AIDHLNEDQLREKAKELWQTIYNLEAEKFDLQEKFKQQKYEINVLRNRI 86 (106)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhHHHHHHHHHH
Confidence 3456788888888888777777777776666666666666666665553
No 36
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=33.06 E-value=76 Score=22.93 Aligned_cols=30 Identities=17% Similarity=0.190 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 188 LMAKNEEMKQMQDKVLRSFAEMENVKDRTI 217 (360)
Q Consensus 188 Le~l~~eleelkDk~lR~~AEfEN~RKR~~ 217 (360)
.+.++.+.++|+.++..+.++.+-++.++.
T Consensus 21 ~eaLk~E~~eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 21 IELLRLELAEMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455666677777777777777777777654
No 37
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=32.29 E-value=70 Score=24.48 Aligned_cols=11 Identities=18% Similarity=0.241 Sum_probs=5.0
Q ss_pred hhhhccccccc
Q 018157 148 KRRRRVSKQTA 158 (360)
Q Consensus 148 ~~~~~~~~~~~ 158 (360)
||+-.+|.++|
T Consensus 11 kR~~qNR~AQR 21 (70)
T 1gd2_E 11 KRKAQNRAAQR 21 (70)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44444444444
No 38
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=31.77 E-value=2.6e+02 Score=25.36 Aligned_cols=37 Identities=5% Similarity=-0.042 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCeeeC---CCC--CCCCccccceee
Q 018157 271 SLLEGVEMTEKQLGEVFKKFGVEKFD---PIN--EPFDPHRHNAMF 311 (360)
Q Consensus 271 sl~eGVeMI~kqL~kvL~k~GVe~Ie---~vG--epFDP~lHEAV~ 311 (360)
.++.-++.+.+.. ...||.++. |-| -...|..+..|.
T Consensus 176 ~lL~~Yerir~~~----~g~avv~v~~~~C~GC~~~lppq~~~~i~ 217 (256)
T 3na7_A 176 KIYSFYERIRRWA----KNTSIVTIKKQACGGCFIRLNDKIYTEVL 217 (256)
T ss_dssp HHHHHHHHHHHHH----GGGSEEECBTTBCTTTCCBCCHHHHHHHH
T ss_pred HHHHHHHHHHHhC----CCceEEEeeCCccCCCCeeeCHHHHHHHH
Confidence 4555566666543 356777775 223 345666555443
No 39
>3plt_A Sphingolipid long chain base-responsive protein L; eisosomes, LSP1, PIL1, BAR domain, plasma membrane, SELF-ASS phosphoprotein; 2.90A {Saccharomyces cerevisiae}
Probab=30.92 E-value=3.3e+02 Score=25.33 Aligned_cols=60 Identities=10% Similarity=0.125 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhHHHHHhcchh
Q 018157 191 KNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVK 250 (360)
Q Consensus 191 l~~eleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~flkdLLpVlDnLERAl~~~~ 250 (360)
++.|+....-..+-+-|.+.|++|+.-||.-.++-.|...+...+.=+...=.+.+..++
T Consensus 136 LeqELvraEae~lvaEAqL~n~kR~~lKEa~~~~f~Al~E~aEK~~ila~~gk~Ll~lld 195 (234)
T 3plt_A 136 LEQELVRAEAESLVAEAQLSNITREKLKAAYSYMFDSLRELSEKFALIAGYGKALLELLD 195 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 334443334444566688999999999999999999999999888877665555555554
No 40
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=30.75 E-value=1.7e+02 Score=23.29 Aligned_cols=17 Identities=24% Similarity=0.263 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHHHHHHH
Q 018157 199 QDKVLRSFAEMENVKDR 215 (360)
Q Consensus 199 kDk~lR~~AEfEN~RKR 215 (360)
++.+.++...+++.+++
T Consensus 57 ~~ei~~le~~i~rhk~~ 73 (84)
T 1gmj_A 57 AKEIERLQKEIERHKQS 73 (84)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333333333333333
No 41
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=29.35 E-value=1.5e+02 Score=25.17 Aligned_cols=37 Identities=19% Similarity=0.159 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 180 LLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRT 216 (360)
Q Consensus 180 ~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~ 216 (360)
++++++.+|+.+..++.+...++.|++++.+-+.-|+
T Consensus 72 ~vqeLqgEI~~Lnq~Lq~a~ae~erlr~~~~~~~~r~ 108 (121)
T 3mq7_A 72 KVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRI 108 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhHh
Confidence 3555555555555555555555555555555444443
No 42
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=27.71 E-value=95 Score=30.06 Aligned_cols=23 Identities=13% Similarity=0.056 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 018157 175 DDLVKLLKEREELLMAKNEEMKQ 197 (360)
Q Consensus 175 dEL~k~l~e~Ee~Le~l~~elee 197 (360)
..|.+.|.+.+.-+.++++|...
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~ 422 (471)
T 3mq9_A 400 HLLQQELTEAQKGFQDVEAQAAT 422 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHhhh
Confidence 34455555555555555555443
No 43
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=27.43 E-value=2.5e+02 Score=22.84 Aligned_cols=50 Identities=16% Similarity=0.306 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Q 018157 175 DDLVKLLKEREELLMAKNEEMKQMQDKVLRS---FAEMENVKDRTIREAENSK 224 (360)
Q Consensus 175 dEL~k~l~e~Ee~Le~l~~eleelkDk~lR~---~AEfEN~RKR~~rE~e~ak 224 (360)
+.+...+..++..+...+.++..|.+.+.+. +.+.+.-++++..|++++-
T Consensus 8 e~lre~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLT 60 (97)
T 2eqb_B 8 NQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLT 60 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555555555555555444432 2344455566666665543
No 44
>1ytz_T Troponin T; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.1 PDB: 1yv0_T 2w49_1 2w4u_1
Probab=26.70 E-value=1.9e+02 Score=23.79 Aligned_cols=47 Identities=21% Similarity=0.222 Sum_probs=32.7
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 169 EIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDR 215 (360)
Q Consensus 169 e~~ls~dEL~k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR 215 (360)
-+.++.++|..++.++=+.|..++++-=++..++.+.--|+..++.|
T Consensus 39 id~l~~~~L~e~~keLh~~I~~lEeEKYDlE~kv~kq~yEI~eL~~r 85 (107)
T 1ytz_T 39 IDHLNEDKLRDKAKELWDWLYQLQTEKYDFAEQIKRKKYEIVTLRNR 85 (107)
T ss_dssp CSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHH
Confidence 44567788888888877777777777666666666666666555555
No 45
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=26.64 E-value=3.7e+02 Score=24.48 Aligned_cols=47 Identities=15% Similarity=0.114 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 176 DLVKLLKEREELLMAKNEE----MKQMQDKVLRSFAEMENVKDRTIREAEN 222 (360)
Q Consensus 176 EL~k~l~e~Ee~Le~l~~e----leelkDk~lR~~AEfEN~RKR~~rE~e~ 222 (360)
.|...++++++++.+++.+ .+++.+.-.|+..|.+.+++......-.
T Consensus 63 ~l~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~rE~e~~~~~a~e~~~~ 113 (213)
T 4ani_A 63 AAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLAS 113 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444544444444333 3566777778888888887776555443
No 46
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=26.45 E-value=1.7e+02 Score=20.61 Aligned_cols=46 Identities=20% Similarity=0.377 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 177 LVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAEN 222 (360)
Q Consensus 177 L~k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~rE~e~ 222 (360)
+...+.+........+.++..++..+.++.+++.+++..+.+-..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~l~~~~~~I~~~k~q 55 (60)
T 3htk_A 10 LENQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVIKKKNQ 55 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555545566667777777778888888888887776655443
No 47
>1u2m_A Histone-like protein HLP-1; coiled coil, chaperone; 2.30A {Escherichia coli} SCOP: f.48.1.1 PDB: 1sg2_A
Probab=26.07 E-value=49 Score=27.21 Aligned_cols=50 Identities=2% Similarity=0.077 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhHHHHH
Q 018157 196 KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRA 245 (360)
Q Consensus 196 eelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~flkdLLpVlDnLERA 245 (360)
......+.....+|..+.+..++++.........++...+-+++..+...
T Consensus 63 ~~~~~el~~~~~~~q~~~~~~~~~l~~~~~~~~~~i~~~i~~ai~~vak~ 112 (143)
T 1u2m_A 63 TKLEKDVMAQRQTFAQKAQAFEQDRARRSNEERGKLVTRIQTAVKSVANS 112 (143)
T ss_dssp ------------------------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566777888888888888888888888888887777777766554
No 48
>1p9i_A Cortexillin I/GCN4 hybrid peptide; coiled-coil, unknown function; 1.17A {Synthetic} SCOP: h.1.10.1
Probab=25.99 E-value=96 Score=20.07 Aligned_cols=24 Identities=21% Similarity=0.224 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 175 DDLVKLLKEREELLMAKNEEMKQM 198 (360)
Q Consensus 175 dEL~k~l~e~Ee~Le~l~~eleel 198 (360)
|+|..+++.++.+-++++..++++
T Consensus 2 dqlnallasleaenkqlkakveel 25 (31)
T 1p9i_A 2 DQLNALLASLEAENKQLKAKVEEL 25 (31)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666666666555555555544
No 49
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding; 3.20A {Archaeoglobus fulgidus}
Probab=25.91 E-value=82 Score=26.46 Aligned_cols=15 Identities=27% Similarity=0.384 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHHH
Q 018157 198 MQDKVLRSFAEMENV 212 (360)
Q Consensus 198 lkDk~lR~~AEfEN~ 212 (360)
+.+++.+++.+...+
T Consensus 30 l~~~v~~l~~e~k~l 44 (171)
T 2zvf_A 30 LPKTVERFFEEWKDQ 44 (171)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 334444444443333
No 50
>1uix_A RHO-associated kinase; coiled-coil, transferase; HET: MSE; 1.80A {Bos taurus} SCOP: h.1.27.1
Probab=25.60 E-value=2.3e+02 Score=21.84 Aligned_cols=41 Identities=17% Similarity=0.314 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 192 NEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAK 233 (360)
Q Consensus 192 ~~eleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~flk 233 (360)
++++..+++.-.....-...|.+.+..|+ -.+..|+-+++.
T Consensus 24 ~ee~~~~~eee~~~~~~k~~lek~L~~E~-~LK~QAVNKLAE 64 (71)
T 1uix_A 24 QEQLSRLKDEEISAAAIKAQFEKQLLTER-TLKTQAVNKLAE 64 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 33333333333333334446777777776 667777777764
No 51
>1s1c_X RHO-associated, coiled-coil containing protein kinase 1; GTPase, RHO kinase, ROCK, signaling protein; HET: GNP; 2.60A {Homo sapiens} SCOP: h.1.27.1
Probab=25.44 E-value=2.3e+02 Score=21.81 Aligned_cols=56 Identities=18% Similarity=0.140 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH----HHHHHHHHHHHHHHHHHHHHHHH
Q 018157 177 LVKLLKEREELLMAKNEEMKQMQDKVLRSF-AEME----NVKDRTIREAENSKKFAIQNFAK 233 (360)
Q Consensus 177 L~k~l~e~Ee~Le~l~~eleelkDk~lR~~-AEfE----N~RKR~~rE~e~akk~Aie~flk 233 (360)
|.+.+..+..+.+++.+++....+.+.++. .+.+ .|.+.+..|+ -.+..|+-+++.
T Consensus 4 L~k~i~~l~~E~eel~~klk~~~ee~~~~~eee~~~~~~~lek~L~~E~-~LK~QAVNKLAE 64 (71)
T 1s1c_X 4 LTKDIEILRRENEELTEKMKKAEEEYKLEKEEEISNLKAAFEKNINTER-TLKTQAVNKLAE 64 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 334444444444444444555554444433 3344 5666666665 566777776654
No 52
>3f6n_A Virion-associated protein; coiled-coil, viral protein, tetramer, DNA-binding, D binding protein; 3.10A {Cauliflower mosaic virus}
Probab=25.22 E-value=1.7e+02 Score=24.96 Aligned_cols=51 Identities=8% Similarity=0.099 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhhhHHhHH
Q 018157 192 NEEMKQMQDKVLRSFAEMENVKDRTIR--EAENSKKFAIQNFAKALLDVADNL 242 (360)
Q Consensus 192 ~~eleelkDk~lR~~AEfEN~RKR~~r--E~e~akk~Aie~flkdLLpVlDnL 242 (360)
..+++++.+....+.++..-+.++..- ......+-..+++++||-..+|.-
T Consensus 8 ~~ei~e~~~~i~~l~~~Ik~il~~~~st~~~~~~lEsiAAKIIkDisdkId~C 60 (129)
T 3f6n_A 8 QKEVSEILSDQKSMKADIKAILELLGSQNPIKESLETVAAKIVNDLTKLINDC 60 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhhHHHHHHHHHHHHHHHHhcC
Confidence 344444445555555666655555544 222555666778888887777753
No 53
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=25.01 E-value=1.5e+02 Score=29.08 Aligned_cols=13 Identities=15% Similarity=0.151 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHH
Q 018157 211 NVKDRTIREAENS 223 (360)
Q Consensus 211 N~RKR~~rE~e~a 223 (360)
..||++-.+++++
T Consensus 45 ~~rr~l~n~~~el 57 (403)
T 4etp_A 45 TVRRTLHNELQEL 57 (403)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc
Confidence 4455555444443
No 54
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=24.98 E-value=2.4e+02 Score=21.94 Aligned_cols=43 Identities=12% Similarity=0.195 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 173 SRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIR 218 (360)
Q Consensus 173 s~dEL~k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~r 218 (360)
+.+++...+. ..++.++.+++.+..++......+.+++..+..
T Consensus 67 ~~~ea~~~L~---~~~e~ie~~i~~le~~~~~l~~~l~~lk~~l~~ 109 (117)
T 2zqm_A 67 TKDKAVAELK---EKIETLEVRLNALERQEKKLNEKLKELTAQIQS 109 (117)
T ss_dssp CHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455544433 334555667777777777777777777766554
No 55
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=24.77 E-value=2.3e+02 Score=22.68 Aligned_cols=35 Identities=17% Similarity=0.130 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 183 EREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTI 217 (360)
Q Consensus 183 e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~ 217 (360)
.+|.....+..+++.|+....+..-+.+.|+.+.+
T Consensus 52 ~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~ 86 (90)
T 2wt7_B 52 HLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSE 86 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555666666666666666666666553
No 56
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=23.86 E-value=2.3e+02 Score=27.98 Aligned_cols=15 Identities=7% Similarity=0.264 Sum_probs=8.3
Q ss_pred HHHHHHHHhCCCeee
Q 018157 281 KQLGEVFKKFGVEKF 295 (360)
Q Consensus 281 kqL~kvL~k~GVe~I 295 (360)
..+..+|..+.+.-|
T Consensus 129 plv~~~l~G~n~tif 143 (412)
T 3u06_A 129 PLIQSALDGYNICIF 143 (412)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHCCCceEEE
Confidence 445566666665544
No 57
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=23.22 E-value=2.6e+02 Score=21.78 Aligned_cols=38 Identities=13% Similarity=0.135 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 179 KLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRT 216 (360)
Q Consensus 179 k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~ 216 (360)
..+...+..+..+..++.++++.+..+..+++.++.+.
T Consensus 64 ~~i~~~~~~l~~l~~~i~~l~~~i~~l~~~~~~l~~~~ 101 (112)
T 1l8d_A 64 ELLSKYHLDLNNSKNTLAKLIDRKSELERELRRIDMEI 101 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444455555555555555444444444444443
No 58
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=22.95 E-value=1.8e+02 Score=28.72 Aligned_cols=28 Identities=21% Similarity=0.216 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 175 DDLVKLLKEREELLMAKNEEMKQMQDKV 202 (360)
Q Consensus 175 dEL~k~l~e~Ee~Le~l~~eleelkDk~ 202 (360)
+.+.+.+...++..+.+..++..+++..
T Consensus 505 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (597)
T 3oja_B 505 DNLNKVFTHLKERQAFKLRETQARRTEA 532 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHhh
Confidence 3344444443333333333333333333
No 59
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=22.77 E-value=2.8e+02 Score=21.83 Aligned_cols=23 Identities=4% Similarity=-0.015 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 018157 197 QMQDKVLRSFAEMENVKDRTIRE 219 (360)
Q Consensus 197 elkDk~lR~~AEfEN~RKR~~rE 219 (360)
.+.....+++.|..+...|+..=
T Consensus 52 ~L~~en~qLk~E~~~wq~Rl~~L 74 (81)
T 2jee_A 52 ELERENNHLKEQQNGWQERLQAL 74 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 36666777777777777776543
No 60
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=22.28 E-value=2.7e+02 Score=21.33 Aligned_cols=18 Identities=17% Similarity=0.080 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 018157 207 AEMENVKDRTIREAENSK 224 (360)
Q Consensus 207 AEfEN~RKR~~rE~e~ak 224 (360)
.++=|+|-++..|+...+
T Consensus 36 q~LlniKl~Le~EIatYR 53 (74)
T 2xv5_A 36 QELLDIKLALDMEIHAYR 53 (74)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334466666766665554
No 61
>1gk6_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, leucine zipper, fusion protein; 1.9A {Saccharomyces cerevisiae} SCOP: h.1.20.1
Probab=21.93 E-value=2.3e+02 Score=20.49 Aligned_cols=18 Identities=22% Similarity=0.124 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 018157 207 AEMENVKDRTIREAENSK 224 (360)
Q Consensus 207 AEfEN~RKR~~rE~e~ak 224 (360)
.++=|+|-++..|+...+
T Consensus 31 q~LlniK~~Le~EIatYR 48 (59)
T 1gk6_A 31 GDLLNVKMALDIEIATYR 48 (59)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHH
Confidence 344466666666665554
No 62
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=21.84 E-value=4.5e+02 Score=33.05 Aligned_cols=50 Identities=20% Similarity=0.199 Sum_probs=33.9
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 169 EIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIR 218 (360)
Q Consensus 169 e~~ls~dEL~k~l~e~Ee~Le~l~~eleelkDk~lR~~AEfEN~RKR~~r 218 (360)
++...+++|++.+++++.+|+++.++.+++-.++...+++.+.-|+.+++
T Consensus 1931 et~~~V~~l~~~L~~~~~~L~~k~~ea~~~l~~i~~~~~~ae~~k~~v~~ 1980 (3245)
T 3vkg_A 1931 DTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARE 1980 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556777777888888888887777777766666666666555544433
No 63
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=21.54 E-value=1.5e+02 Score=24.26 Aligned_cols=29 Identities=10% Similarity=0.157 Sum_probs=14.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 173 SRDDLVKLLKEREELLMAKNEEMKQMQDK 201 (360)
Q Consensus 173 s~dEL~k~l~e~Ee~Le~l~~eleelkDk 201 (360)
+.+++.+.+....++++.++.++..++.+
T Consensus 83 ~~~~l~~~~~~e~~~~~~L~~~i~~Le~e 111 (117)
T 3kin_B 83 TAEEWKKKYEKEKEKNKALKSVIQHLEVE 111 (117)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44666665555444444444444444433
No 64
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=20.97 E-value=6.9e+02 Score=27.72 Aligned_cols=30 Identities=10% Similarity=0.332 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 187 LLMAKNEEMKQMQDKVLRSFAEMENVKDRT 216 (360)
Q Consensus 187 ~Le~l~~eleelkDk~lR~~AEfEN~RKR~ 216 (360)
++..++++++++++.+.++..|.+.+..+.
T Consensus 985 ~v~~L~~e~~~l~~~~~~~~ke~~~lee~~ 1014 (1080)
T 2dfs_A 985 RVLSLQEEIAKLRKELHQTQTEKKTIEEWA 1014 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555555555555555444433
No 65
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=20.92 E-value=3.5e+02 Score=26.62 Aligned_cols=25 Identities=16% Similarity=0.218 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 018157 192 NEEMKQMQDKVLRSFAEMENVKDRT 216 (360)
Q Consensus 192 ~~eleelkDk~lR~~AEfEN~RKR~ 216 (360)
++++++++.+..+++++.+.++..+
T Consensus 16 ~~~~~~l~~~~~~~~~~~~~~~~~l 40 (412)
T 3u06_A 16 RQRTEELLRCNEQQAAELETCKEQL 40 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333444444444444444333
Done!