BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018158
(360 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/348 (54%), Positives = 240/348 (68%), Gaps = 2/348 (0%)
Query: 8 HTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPV 67
H GWAA D SG ++P+ F RR G DV K+LYCG+CH+D+H +KNDWG +MYP+
Sbjct: 13 HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPL 72
Query: 68 VPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIF 127
VPGHEI G +T+VGS VK VGD+ VGCL AC CE C + ENYC K+ TY I+
Sbjct: 73 VPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIY 132
Query: 128 WDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKR 187
DG+ITYGGYS +VA+ R+++ P+N+ +D APLLCAGITV+ P+K L D P K
Sbjct: 133 HDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGL-DEPG-KH 190
Query: 188 XXXXXXXXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKR 247
AVKF KAFG VTVISTSPSK++EA + GAD F++S + QMQA
Sbjct: 191 IGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAG 250
Query: 248 TLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGM 307
TLD I+DTVSA H L P+ LLK +G L +VGAPE P ELP+F LI G++ V GS GGM
Sbjct: 251 TLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGM 310
Query: 308 RETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
+ETQEM++ K+NIT +IEVI D +N A++RLA+NDVRYRFVID+
Sbjct: 311 KETQEMIDFAAKHNITADIEVISTDYLNTAMERLAKNDVRYRFVIDVG 358
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 285 bits (730), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/349 (43%), Positives = 213/349 (61%), Gaps = 14/349 (4%)
Query: 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVP 69
++V ++A P + P RRE G NDV I+I YCG+CH+D+H V+++W T+YP VP
Sbjct: 24 KAVGAYSAKQP---LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP 80
Query: 70 GHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWD 129
GHEI G + VG V+ + GD VGC+ +C CE C+D ENYCD + TYN D
Sbjct: 81 GHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPD 140
Query: 130 G-SITYGGYSEMLVADYRFVV---HVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAK 185
T GGYS+ +V R+V+ H E +A A APLLCAGIT + P++ +
Sbjct: 141 EPGHTLGGYSQQIVVHERYVLRIRHPQEQLA--AVAPLLCAGITTYSPLRH---WQAGPG 195
Query: 186 KRXXXXXXXXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG 245
K+ +K A G HV +TS +K +EA + LGADE + S NA +M A
Sbjct: 196 KKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAK-REAAKALGADEVVNSRNADEMAAH 254
Query: 246 KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPS-FPLIFGKRSVKGSMT 304
++ DFIL+TV+A H+L LLK +GT+++VGAP P + P F LI +R++ GSM
Sbjct: 255 LKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMI 314
Query: 305 GGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVID 353
GG+ ETQEM++ C ++ I +IE+I+ DQINEA +R+ R DV+YRFVID
Sbjct: 315 GGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVID 363
>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases, Atcad5
pdb|2CF6|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases Atcad5
Length = 357
Score = 278 bits (712), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/347 (42%), Positives = 217/347 (62%), Gaps = 2/347 (0%)
Query: 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVP 69
+ GWAA DPSG ++PY + RE G DV I+I+ CGICHTD+H KND G++ YP+VP
Sbjct: 8 RKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVP 67
Query: 70 GHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWD 129
GHE+ G + +VGS+V F VGD VGCL C C C+ E YC K ++YN ++ +
Sbjct: 68 GHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYIN 127
Query: 130 GSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXX 189
G T GG+++ V +FVV +PE +A++ AAPLLCAG+TV+ P+ L R
Sbjct: 128 GQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGL--KQPGLRGG 185
Query: 190 XXXXXXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTL 249
VK KA GHHVTVIS+S K +EA + LGAD++++ ++ +M +L
Sbjct: 186 ILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSL 245
Query: 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRE 309
D+++DTV H+L P L LLK++G L ++G P + + L+ G++ + GS G M+E
Sbjct: 246 DYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKE 305
Query: 310 TQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAG 356
T+EM+ C + ++ IEV+K D +N A +RL +NDVRYRFV+D+ G
Sbjct: 306 TEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDVEG 352
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 225 bits (573), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/346 (37%), Positives = 187/346 (54%), Gaps = 14/346 (4%)
Query: 14 GWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEI 73
G+A P+ F R G DV I ILY GICH+DIH ++W +YP++PGHEI
Sbjct: 7 GFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEI 66
Query: 74 TGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGI--FWDGS 131
GII +VG VK FK+GD VGC +C C+ CK+ QE +C K+ FTY+ + F D
Sbjct: 67 AGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNE 126
Query: 132 ITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXX 191
GGYS +V D +V+ V +N ++ APLLCAGIT + P+K + + +
Sbjct: 127 PHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKVTKG---TKVGVA 183
Query: 192 XXXXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDF 251
AVK+ A G V+V + + K+++A +G F T+ Q K LDF
Sbjct: 184 GFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MGVKHFY--TDPKQC---KEELDF 237
Query: 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAP--EAPFELPSFPLI-FGKRSVKGSMTGGMR 308
I+ T+ + L L+LL NG L++VG P E L F I G R V GS+ GG++
Sbjct: 238 IISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIK 297
Query: 309 ETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354
ETQEM++ K+NI I++I I+ A L ++R+VID+
Sbjct: 298 ETQEMVDFSIKHNIYPEIDLILGKDIDTAYHNLTHGKAKFRYVIDM 343
>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1Q1N|A Chain A, Apo And Holo Structures Of An Nadp(h)-dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|A Chain A, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|B Chain B, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
Length = 360
Score = 164 bits (414), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 159/324 (49%), Gaps = 14/324 (4%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKN-FKVGDRAAV 95
+D+ IKI CG+C +DIH WG P+V GHEI G + K+G + KVG R V
Sbjct: 34 HDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGV 93
Query: 96 GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENI 155
G +C+EC+ CK+ E YC K TY+ + DG ++ GGY+ + FVV +PENI
Sbjct: 94 GAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENI 153
Query: 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFGHHVTVIS 215
AAPLLC G+TV+ P+ N P KK + KA G VIS
Sbjct: 154 PSHLAAPLLCGGLTVYSPLVRNGC--GPGKKVGIVGLGGIGSMGTL-ISKAMGAETYVIS 210
Query: 216 TSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI-----LELLK 270
S K ++A + +GAD +I + + G++ D V SL I + +K
Sbjct: 211 RSSRKREDAMK-MGADHYIATLE--EGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMK 267
Query: 271 VNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEVIK 330
V G + + PE L P S+ S G ++E +++ + + +I +E +
Sbjct: 268 VGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDIKIWVETLP 327
Query: 331 PDQ--INEALDRLARNDVRYRFVI 352
+ ++EA +R+ + DVRYRF +
Sbjct: 328 VGEAGVHEAFERMEKGDVRYRFTL 351
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 159/327 (48%), Gaps = 21/327 (6%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITM-YPVVPGHEITGIITKVGSNVKNFKVGDRA 93
G V +KI G+CHTD+H + DW + P +PGHE G + VGS V K GDR
Sbjct: 30 GPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRV 89
Query: 94 AVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPE 153
+ L AC CE C E C+ Q T G GGY+E ++AD +V +P+
Sbjct: 90 GIPWLYTACGCCEHCLTGWETLCESQQNT-------GYSVNGGYAEYVLADPNYVGILPK 142
Query: 154 NIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFGHHVTV 213
N+ AP+LCAG+TV+ +K N + + AV++ +A G HV
Sbjct: 143 NVEFAEIAPILCAGVTVYKGLKQTN---ARPGQWVAISGIGGLGHVAVQYARAMGLHVAA 199
Query: 214 ISTSPSKEKEAKELLGADEFILSTNAMQ---MQAGKRTLDF---ILDTVSAKHSLGPILE 267
I +K + A++L GA L+ NA Q ++A +R + +L T + + G +
Sbjct: 200 IDIDDAKLELARKL-GAS---LTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIG 255
Query: 268 LLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIE 327
+ + GT+++VG P F P F ++ + GS+ G + QE ++ G+ + I
Sbjct: 256 MARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEGLVKATIH 315
Query: 328 VIKPDQINEALDRLARNDVRYRFVIDI 354
K D IN+ LD++ + R V+++
Sbjct: 316 PGKLDDINQILDQMRAGQIEGRIVLEM 342
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 155/325 (47%), Gaps = 21/325 (6%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGIT-MYPVVPGHEITGIITKVGSNVKNFKVGDRAAV 95
+V ++I CG+CHTD+H DW + P++PGHE GI+ +VG V + KVGDR +
Sbjct: 26 GEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGI 85
Query: 96 GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENI 155
L +AC C++C QE C+ + G GGY+E A +VV +P+N+
Sbjct: 86 PWLYSACGHCDYCLSGQETLCEHQKNA-------GYSVDGGYAEYCRAAADYVVKIPDNL 138
Query: 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFGHHVTVIS 215
+ + AAP+ CAG+T + +K + + + AV++ KA G +V +
Sbjct: 139 SFEEAAPIFCAGVTTYKALK---VTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVD 195
Query: 216 TSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFI------LDTVSAKHSLGPILELL 269
K + AKE LGAD L N ++ A K + + + T +K + +
Sbjct: 196 IGDEKLELAKE-LGAD---LVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSI 251
Query: 270 KVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEVI 329
+ G +VG P +P F + + GS+ G ++ QE + + + IEV
Sbjct: 252 RRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTIIEVQ 311
Query: 330 KPDQINEALDRLARNDVRYRFVIDI 354
++INE DR+ + + R V+ +
Sbjct: 312 PLEKINEVFDRMLKGQINGRVVLTL 336
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 152/327 (46%), Gaps = 15/327 (4%)
Query: 33 ENGVNDVTIKILYCGICHTDIHHVKNDWGIT-MYPVVPGHEITGIITKVGSNVKNFKVGD 91
+ G V +KI G+CHTD+H DW + P +PGHE G ++ VGS V K GD
Sbjct: 24 QPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGD 83
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
R V L +AC CE C E C+K Q T G GGY E +VAD +V +
Sbjct: 84 RVGVPWLYSACGYCEHCLQGWETLCEKQQNT-------GYSVNGGYGEYVVADPNYVGLL 136
Query: 152 PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFGHHV 211
P+ + AP+LCAG+TV+ +K + D+ + AV++ +A G V
Sbjct: 137 PDKVGFVEIAPILCAGVTVYKGLK---VTDTRPGQWVVISGIGGLGHVAVQYARAMGLRV 193
Query: 212 TVISTSPSKEKEAKELLGADEFILSTN---AMQMQAGKRTLDFILDTVSAKHSLGPILEL 268
+ +K A+ LGA+ + + + A +Q +L T + + + +
Sbjct: 194 AAVDIDDAKLNLARR-LGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGM 252
Query: 269 LKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEV 328
++ GT+++ G P F P F ++ +++GS+ G + QE ++ ++ +
Sbjct: 253 VRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKATVST 312
Query: 329 IKPDQINEALDRLARNDVRYRFVIDIA 355
K D +N+ RL V R V+D +
Sbjct: 313 AKLDDVNDVFGRLREGKVEGRVVLDFS 339
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 155/325 (47%), Gaps = 21/325 (6%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGIT-MYPVVPGHEITGIITKVGSNVKNFKVGDRAAV 95
+V ++I CG+CHTD+H DW + P++PGHE GI+ +VG V + KVGDR +
Sbjct: 26 GEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGI 85
Query: 96 GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENI 155
L +AC C++C QE C+ + G GGY+E A +VV +P+N+
Sbjct: 86 PWLYSACGHCDYCLSGQETLCEHQKNA-------GYSVDGGYAEYCRAAADYVVKIPDNL 138
Query: 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFGHHVTVIS 215
+ + AAP+ CAG+T + +K + + + AV++ KA G +V +
Sbjct: 139 SFEEAAPIFCAGVTTYKALK---VTGAKPGEWVAIYGIGGFGHVAVQYAKAMGLNVVAVD 195
Query: 216 TSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFI------LDTVSAKHSLGPILELL 269
K + AKE LGAD L N ++ A K + + + T +K + +
Sbjct: 196 IGDEKLELAKE-LGAD---LVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSI 251
Query: 270 KVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEVI 329
+ G +VG P +P F + + GS+ G ++ QE + + + IEV
Sbjct: 252 RRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTIIEVQ 311
Query: 330 KPDQINEALDRLARNDVRYRFVIDI 354
++INE DR+ + + R V+ +
Sbjct: 312 PLEKINEVFDRMLKGQINGRVVLTL 336
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 150/327 (45%), Gaps = 15/327 (4%)
Query: 33 ENGVNDVTIKILYCGICHTDIHHVKNDWGITMYP-VVPGHEITGIITKVGSNVKNFKVGD 91
+ G + + I G+CHTD+H + DW + P +PGHE G ++ VGS VK+ K GD
Sbjct: 47 QPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNPPFIPGHEGVGFVSAVGSGVKHVKEGD 106
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
R + L AC C C E C++ T G GG++E +VAD FV H+
Sbjct: 107 RVGIPWLYTACGHCRHCLGGWETLCEEQLNT-------GYSVNGGFAEYVVADPNFVGHL 159
Query: 152 PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFGHHV 211
P+NI + AP+LCAG+TV+ +K + D+ AV++ +A G +V
Sbjct: 160 PKNIDFNEIAPVLCAGVTVYKGLK---VTDTKPGDWVVISGIGGLGHMAVQYARAMGLNV 216
Query: 212 TVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLD----FILDTVSAKHSLGPILE 267
+ K A+ L T A ++ D +L T + + L
Sbjct: 217 AAVDIDDRKLDLARRLGATVTVNAKTVADPAAYIRKETDGGAQGVLVTAVSPKAFEQALG 276
Query: 268 LLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIE 327
++ GT+S+ G P F L F ++ +V+GS+ G + QE ++ + I+
Sbjct: 277 MVARGGTVSLNGLPPGDFPLSIFNMVLNGVTVRGSIVGTRLDLQESLDFAADGKVKATIQ 336
Query: 328 VIKPDQINEALDRLARNDVRYRFVIDI 354
K + IN D + + ++ R V+D+
Sbjct: 337 TGKLEDINAIFDDMRQGNIEGRIVMDL 363
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 152/326 (46%), Gaps = 17/326 (5%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITM-YPVVPGHEITGIITKVGSNVKNFKVGDRAAV 95
N++ I + Y G+CHTD+H DW + + P+V GHE G++ +G NVK +K+GD A +
Sbjct: 31 NELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGI 90
Query: 96 GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENI 155
L +CM CE+C+ E+ C + G DGS + + AD H+P+
Sbjct: 91 KWLNGSCMACEYCELGNESNCPHADLS--GYTHDGS-----FQQYATADAVQAAHIPQGT 143
Query: 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFGHHVTVIS 215
+ AP+LCAGITV+ +K NL+ AV++ KA G+ V I
Sbjct: 144 DLAQVAPILCAGITVYKALKSANLM--AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGID 201
Query: 216 TSPSKEKEAKELLGADEFILSTNAMQ-----MQAGKRTLDFILDTVSAKHSLGPILELLK 270
KE E +G + FI T ++A +++ ++ ++ ++
Sbjct: 202 GGEGKE-ELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVR 260
Query: 271 VNGTLSVVGAPE-APFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEVI 329
NGT +VG P A F + S+ GS G +T+E ++ + + I+V+
Sbjct: 261 ANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLVKSPIKVV 320
Query: 330 KPDQINEALDRLARNDVRYRFVIDIA 355
+ E +++ + + R+V+D +
Sbjct: 321 GLSTLPEIYEKMEKGQIVGRYVVDTS 346
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 150/344 (43%), Gaps = 22/344 (6%)
Query: 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGII 77
H+P G + R N+ + + YCG+CHTD+H D+G V GHE GI+
Sbjct: 8 HNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDYG-NKAGTVLGHEGIGIV 66
Query: 78 TKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGY 137
++G++V + +VGDR +V C CE+C E +C +++ G GG
Sbjct: 67 KEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNA-------GYSVDGGM 119
Query: 138 SE--MLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXX 195
+E ++VADY V VP+ + A+ + CAG+T + +K + + P +
Sbjct: 120 AEEAIVVADY--AVKVPDGLDPIEASSITCAGVTTYKAIKVSGV--KPGDWQ-VIFGAGG 174
Query: 196 XXXXAVKFGK-AFGHHVTVISTSPSKEKEAKELLGADEFILS-----TNAMQMQAGKRTL 249
A+++ K FG V + + K AK+ +GAD I S + ++ G +
Sbjct: 175 LGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK-IGADVIINSGDVNPVDEIKKITGGLGV 233
Query: 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRE 309
+ A+ + + LK G + V P L ++F V GS+ G +
Sbjct: 234 QSAIVCAVARIAFEQAVASLKPMGKMVAVALPNTEMTLSVPTVVFDGVEVAGSLVGTRLD 293
Query: 310 TQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVID 353
E + + + K ++IN+ +D + + R VID
Sbjct: 294 LAEAFQFGAEGKVKPIVATRKLEEINDIIDEMKAGKIEGRMVID 337
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 150/344 (43%), Gaps = 22/344 (6%)
Query: 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGII 77
H+P G + R N+ + + YCG+CHTD+H D+G V GHE GI+
Sbjct: 8 HNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG-NKAGTVLGHEGIGIV 66
Query: 78 TKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGY 137
++G++V + +VGDR +V C CE+C E +C +++ G GG
Sbjct: 67 KEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNA-------GYSVDGGM 119
Query: 138 SE--MLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXX 195
+E ++VADY V VP+ + A+ + CAG+T + +K + + P +
Sbjct: 120 AEEAIVVADY--AVKVPDGLDPIEASSITCAGVTTYKAIKVSGV--KPGDWQ-VIFGAGG 174
Query: 196 XXXXAVKFGK-AFGHHVTVISTSPSKEKEAKELLGADEFILS-----TNAMQMQAGKRTL 249
A+++ K FG V + + K AK+ +GAD I S + ++ G +
Sbjct: 175 LGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK-IGADVTINSGDVNPVDEIKKITGGLGV 233
Query: 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRE 309
+ A+ + + LK G + V P L ++F V GS+ G +
Sbjct: 234 QSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLD 293
Query: 310 TQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVID 353
E + + + K ++IN+ +D + + R VID
Sbjct: 294 LAEAFQFGAEGKVKPIVATRKLEEINDIIDEMKAGKIEGRMVID 337
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 155/333 (46%), Gaps = 24/333 (7%)
Query: 32 RENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVP---GHEITGIITKVGSNVKNFK 88
R G DV ++I G+CHTD+H V+ W + P +P GHE G I +V V+ +
Sbjct: 37 RLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 96
Query: 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFV 148
GD + A C C+ ++ +C+ ++F G+ DG G++E + +R V
Sbjct: 97 KGDPVILHP-AVTDGTCLACRAGEDMHCENLEFP--GLNIDG-----GFAEFMRTSHRSV 148
Query: 149 VHVPENIAMDA---AAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGK 205
+ +P++I+ + APL AGIT + +K P AV+ K
Sbjct: 149 IKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAY-VAIVGVGGLGHIAVQLLK 207
Query: 206 AFGHHVTVISTSPSKEK-EAKELLGADEFILS-----TNAMQMQAGKRTLDFILDTVSAK 259
TVI+ +EK + E LGAD + + M++ G R ++ +D V ++
Sbjct: 208 VMTP-ATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRG-RGVNVAMDFVGSQ 265
Query: 260 HSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGK 319
++ LL G L +VG P+ +I + S +GS+ G E E++ + +
Sbjct: 266 ATVDYTPYLLGRMGRLIIVGYG-GELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQ 324
Query: 320 YNITCNIEVIKPDQINEALDRLARNDVRYRFVI 352
+ +++ K D+IN+ L+RL + +V R V+
Sbjct: 325 GKVRVEVDIHKLDEINDVLERLEKGEVLGRAVL 357
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 143/320 (44%), Gaps = 28/320 (8%)
Query: 38 DVTIKILYCGICHTDIH---------HVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88
V IK+ G+CH+D+H + D G+ + PV GHEI G I +VG V +
Sbjct: 27 QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKL-PVTLGHEIAGKIEEVGDEVVGYS 85
Query: 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFV 148
GD AV L C +C+ +E+ CD ++ GI +DG+ Y Y ++V Y+++
Sbjct: 86 KGDLVAVNPLQGEG-NCYYCRIGEEHLCDSPRWL--GINFDGA--YAEY--VIVPHYKYM 138
Query: 149 VHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFG 208
+ A++ AAPL C+GIT + ++ +L P K AV+ KA
Sbjct: 139 YKLRRLNAVE-AAPLTCSGITTYRAVRKASL--DPTKTLLVVGAGGGLGTMAVQIAKAVS 195
Query: 209 HHVTVISTSPSKEK-EAKELLGADEFILSTNAMQMQAGKRT-----LDFILDTVSAKHSL 262
T+I +E EA + GAD I ++ + +R +D ++D ++ +L
Sbjct: 196 -GATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTL 254
Query: 263 GPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNI 322
+ L G +VG A + + + GS+ G + +M + +
Sbjct: 255 SVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKV 314
Query: 323 TCNI-EVIKPDQINEALDRL 341
I + +K ++ NEA+D L
Sbjct: 315 KPMITKTMKLEEANEAIDNL 334
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 148/322 (45%), Gaps = 30/322 (9%)
Query: 37 NDVTIKILYCGICHTDIH---------HVKNDWGITMYPVVPGHEITGIITKVGSNVKNF 87
+ V IKI G+CH+D+H + D G+ + PV GHEI G I +VG V +
Sbjct: 26 SQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKL-PVTLGHEIAGRIEEVGDEVVGY 84
Query: 88 KVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSE-MLVADYR 146
GD AV C +C+ +E+ CD ++ GI +DG+ Y+E +LV Y+
Sbjct: 85 SKGDLVAVNPWEGEG-NCYYCRIGEEHLCDSPRWL--GINYDGA-----YAEYVLVPHYK 136
Query: 147 FVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKA 206
++ + A++ AAPL C+G+T + ++ +L P+K A++ KA
Sbjct: 137 YLYKLRRLSAVE-AAPLTCSGVTTYRAVRKASL--DPSKTLVVIGAGGGLGTMAIQIAKA 193
Query: 207 FGHHVTVISTSPSKEK-EAKELLGADEFILSTNAMQMQAGKRTL-----DFILDTVSAKH 260
T+I +E EA + GAD I +++ + +R D ++D +++
Sbjct: 194 V-SGATIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQGKGADAVIDLNNSEK 252
Query: 261 SLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKY 320
+L +L G +VG A + + + + GS+ G + +M++
Sbjct: 253 TLSIYPYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFIGSLVGNQSDFLGIMSLAEAG 312
Query: 321 NITCNI-EVIKPDQINEALDRL 341
+ + + +K ++ NEA+D L
Sbjct: 313 KVKPMVTKTMKLEEANEAIDNL 334
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 143/320 (44%), Gaps = 28/320 (8%)
Query: 38 DVTIKILYCGICHTDIH---------HVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88
V IK+ G+CH+D+H + D G+ + PV GHEI G I +VG V +
Sbjct: 27 QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKL-PVTLGHEIAGKIEEVGDEVVGYS 85
Query: 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFV 148
GD AV C +C+ +E+ CD ++ GI +DG+ Y Y ++V Y+++
Sbjct: 86 KGDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL--GINFDGA--YAEY--VIVPHYKYM 138
Query: 149 VHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFG 208
+ A++ AAPL C+GIT + ++ +L P K AV+ KA
Sbjct: 139 YKLRRLNAVE-AAPLTCSGITTYRAVRKASL--DPTKTLLVVGAGGGLGTMAVQIAKAVS 195
Query: 209 HHVTVISTSPSKEK-EAKELLGADEFILSTNAMQMQAGKRT-----LDFILDTVSAKHSL 262
T+I +E EA + GAD I ++ + +R +D ++D +++ +L
Sbjct: 196 -GATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTL 254
Query: 263 GPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNI 322
+ L G +VG A + + + GS+ G + +M + +
Sbjct: 255 SVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKV 314
Query: 323 TCNI-EVIKPDQINEALDRL 341
I + +K ++ NEA+D L
Sbjct: 315 KPMITKTMKLEEANEAIDNL 334
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 142/320 (44%), Gaps = 28/320 (8%)
Query: 38 DVTIKILYCGICHTDIH---------HVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88
V IK+ G+CH+D+H + D G+ + PV GHEI G I +VG V +
Sbjct: 27 QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKL-PVTLGHEIAGKIEEVGDEVVGYS 85
Query: 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFV 148
GD AV C +C+ +E+ CD ++ GI +DG+ Y Y ++V Y+++
Sbjct: 86 KGDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL--GINFDGA--YAEY--VIVPHYKYM 138
Query: 149 VHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFG 208
+ A++ AAPL C+GIT + ++ +L P K AV+ KA
Sbjct: 139 YKLRRLNAVE-AAPLTCSGITTYRAVRKASL--DPTKTLLVVGAGGGLGTMAVQIAKAVS 195
Query: 209 HHVTVISTSPSKEK-EAKELLGADEFILSTNAMQMQAGKRT-----LDFILDTVSAKHSL 262
T+I +E EA + GAD I ++ + +R +D ++D ++ +L
Sbjct: 196 -GATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTL 254
Query: 263 GPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNI 322
+ L G +VG A + + + GS+ G + +M + +
Sbjct: 255 SVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKV 314
Query: 323 TCNI-EVIKPDQINEALDRL 341
I + +K ++ NEA+D L
Sbjct: 315 KPMITKTMKLEEANEAIDNL 334
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 140/319 (43%), Gaps = 28/319 (8%)
Query: 39 VTIKILYCGICHTDIH---------HVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89
V IK+ G+CH+D+H + D G+ + PV GHEI G I +VG V +
Sbjct: 28 VLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKL-PVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVV 149
GD AV C +C+ +E+ CD ++ GI +DG+ Y Y ++V Y++
Sbjct: 87 GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL--GINFDGA--YAEY--VIVPHYKYXY 139
Query: 150 HVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFGH 209
+ A++ AAPL C+GIT + ++ +L P K AV+ KA
Sbjct: 140 KLRRLNAVE-AAPLTCSGITTYRAVRKASL--DPTKTLLVVGAGGGLGTXAVQIAKAVS- 195
Query: 210 HVTVISTSPSKEK-EAKELLGADEFILSTNAMQMQAGKRT-----LDFILDTVSAKHSLG 263
T+I +E EA + GAD I ++ + +R +D ++D +++ +L
Sbjct: 196 GATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLS 255
Query: 264 PILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNIT 323
+ L G VG A + + + GS+ G + + + +
Sbjct: 256 VYPKALAKQGKYVXVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIXRLAEAGKVK 315
Query: 324 CNI-EVIKPDQINEALDRL 341
I + K ++ NEA+D L
Sbjct: 316 PXITKTXKLEEANEAIDNL 334
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 130/327 (39%), Gaps = 16/327 (4%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMY--PVVPGHEITGIITKVGSNVKNFKVGDR 92
G ++ +K+ G+CH+DI + Y P+ GHE G + ++G V F VGD
Sbjct: 24 GPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDA 83
Query: 93 AAVGCLAAACMECEFCKDSQENYCDK---IQFTYNGIFWDGSITYGGYSEMLVADYRFVV 149
AV C C C +ENYC + + T G+ GS+ M+V R +V
Sbjct: 84 VAV-YGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMA----EYMIVDSARHLV 138
Query: 150 HVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFGH 209
+ ++ AAAPL AG+T + + + P
Sbjct: 139 PI-GDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAA 197
Query: 210 HVTVISTSPSKEKEAKELLGADEFILS----TNAMQMQAGKRTLDFILDTVSAKHSLGPI 265
V + + A+E +GAD + S +A++ G + + D V A+ ++
Sbjct: 198 RVIAVDLDDDRLALARE-VGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQSTIDTA 256
Query: 266 LELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCN 325
+++ V+G +SVVG F +I SV G E E++ + + +
Sbjct: 257 QQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGTRSELMEVVALARAGRLDIH 316
Query: 326 IEVIKPDQINEALDRLARNDVRYRFVI 352
E D+ A RL +R R V+
Sbjct: 317 TETFTLDEGPAAYRRLREGSIRGRGVV 343
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 140/322 (43%), Gaps = 27/322 (8%)
Query: 33 ENGVNDVTIKILYCGICHTDIHHVKNDWGITM-YPVVPGHEITGIITKVGSNVKNFKVGD 91
E G +D+ ++ L + + D ++ G+ + +P VP + +G++ VG +V F+ GD
Sbjct: 50 EAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPASDXSGVVEAVGKSVTRFRPGD 109
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
R + A ++ + + + + G+ SE +V + V
Sbjct: 110 R-VISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVL----------SEYVVLPEGWFVAA 158
Query: 152 PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFGHHV 211
P+++ A+ L CAG+T + + + + A R ++ KA G V
Sbjct: 159 PKSLDAAEASTLPCAGLTAWFALVEKGHLR--AGDRVVVQGTGGVALFGLQIAKATGAEV 216
Query: 212 TVISTSPSKEKEAKEL-LGADEFI--LSTNAMQ---MQAGKRTLDFILDTVSAKHSLGPI 265
V TS S+EK + LGAD I L + ++ G R D IL+ ++ LG
Sbjct: 217 IV--TSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILE-IAGGAGLGQS 273
Query: 266 LELLKVNGTLSVVGAPEAPFEL--PSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNIT 323
L+ + +G +SV+G E FE+ P PL+ V+G G R ++++ + +
Sbjct: 274 LKAVAPDGRISVIGVLEG-FEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVDRLGLK 332
Query: 324 CNIEV-IKPDQINEALDRLARN 344
I+ K ++ EAL L R
Sbjct: 333 PVIDXRYKFTEVPEALAHLDRG 354
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 12/131 (9%)
Query: 37 NDVTIKILYCGICHTDIHHVKN----DWGITMYPVVPGHEITGIITKVGSNVKNFKVGDR 92
++V +++ Y GIC +D+H+ ++ D+ I P+V GHE +G + KVG NVK+ K GDR
Sbjct: 29 DEVLLQMAYVGICGSDVHYYEHGRIADF-IVKDPMVIGHEASGTVVKVGKNVKHLKKGDR 87
Query: 93 AAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVP 152
AV C C+FCK+ + N C + F G + V F +P
Sbjct: 88 VAVE-PGVPCRRCQFCKEGKYNLCPDLTFCAT------PPDDGNLARYYVHAADFCHKLP 140
Query: 153 ENIAMDAAAPL 163
+N++++ A L
Sbjct: 141 DNVSLEEGALL 151
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 135/339 (39%), Gaps = 46/339 (13%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
+V IK++ GICHTD H V + +T PV+ GHE GI+ VG V K GD+ +
Sbjct: 35 EVRIKMVAVGICHTDDHVVSGNL-VTPLPVILGHEAAGIVESVGEGVTTVKPGDK-VIPL 92
Query: 98 LAAACMECEFCKDSQENYCDKIQF-TYNGIFWDGSITY-------------GGYSEMLVA 143
C +C CK+ + NYC K G DG+ + +S+ V
Sbjct: 93 FTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 144 DYRFVVHVPENIAMDAAAP-----LLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXX 198
D V + DAA+P L+ G + N +P
Sbjct: 153 DENAVAKI------DAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLS 206
Query: 199 XAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI--------LSTNAMQMQAGKRTLD 250
+ A + + + K +AKE LGA E I + +M G +D
Sbjct: 207 AVMGCKAAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGG--VD 263
Query: 251 FILDTVSAKHS-LGPILELLKVNGTLSVVGAPEAPFELPSFP-LIFGKRSVKGSMTGGMR 308
F + + + + +L + GT +VG P A L P L+ R+ KG++ GG +
Sbjct: 264 FSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKGAVYGGFK 323
Query: 309 ETQEMMNVCG-----KYNITCNIEVIKP-DQINEALDRL 341
+ + + K+++ I + P ++INE D L
Sbjct: 324 SKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLL 362
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 134/326 (41%), Gaps = 39/326 (11%)
Query: 10 QSVVGWAAHDPSGKITPYIFKRRENGV---NDVTIKILYCGICHTDIHHVKNDWGITMYP 66
++ V W A+ P + + E V N++ IKI+ G+CHTD++H+ +P
Sbjct: 10 KAAVAWEANKP------LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFP 63
Query: 67 VVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDK-------- 118
VV GHE GI+ VG V F+ G++ + + C EC FC+ + N C K
Sbjct: 64 VVLGHEGAGIVESVGPGVTEFQPGEK-VIPLFISQCGECRFCQSPKTNQCVKGWANESPD 122
Query: 119 ------IQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFC 172
+FT G + +S+ V + V + + +D L C T F
Sbjct: 123 VMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFG 182
Query: 173 PMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE 232
+ ++ P + A + + +P K ++AK + GA +
Sbjct: 183 AAVNTAKVE-PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGATD 240
Query: 233 FI--------LSTNAMQMQAGKRTLDFILDTVSAKHSLGPILE-LLKVNGTLSVVGAPEA 283
F+ +S +M G +DF L+ V + LE LK G +VG +
Sbjct: 241 FVNPNDHSEPISQVLSKMTNG--GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL 298
Query: 284 PFELPSFPL-IFGKRSVKGSMTGGMR 308
++ + P+ + R+ KGSM GG +
Sbjct: 299 -HDVATRPIQLIAGRTWKGSMFGGFK 323
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
+V IKIL GIC TD H +K ++ +PV+ GHE TGI+ +G V K GD+ +
Sbjct: 34 KEVRIKILATGICRTDDHVIKGTM-VSKFPVIVGHEATGIVESIGEGVTTVKPGDK-VIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITY 134
C EC C++ N C + T G+ DG+ +
Sbjct: 92 LFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRF 129
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
+V IKIL GIC TD H +K ++ +PV+ GHE TGI+ +G V K GD+ +
Sbjct: 34 KEVRIKILATGICRTDDHVIKGTM-VSKFPVIVGHEATGIVESIGEGVTTVKPGDK-VIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITY 134
C EC C++ N C + T G+ DG+ +
Sbjct: 92 LFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRF 129
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
+V IKILY +CHTD + ++P + GHE GI+ VG V + GD + C
Sbjct: 35 EVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHV-IPC 93
Query: 98 LAAACMECEFCKDSQENYCDKIQ 120
A C EC+FCK + N C K++
Sbjct: 94 YQAECRECKFCKSGKTNLCGKVR 116
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 137/325 (42%), Gaps = 22/325 (6%)
Query: 38 DVTIKILYCGICHTDIH---HVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
+V I+I G+C TD+ V+ G + P++ GHE G I +VG K K GD
Sbjct: 30 EVLIRIGGAGVCRTDLRVWKGVEAKQGFRL-PIILGHENAGTIVEVGELAK-VKKGDNVV 87
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSE-MLVADYRFVVHVPE 153
V + C +C++ + N C N I G T GG+SE MLV R++V +
Sbjct: 88 VYA-TWGDLTCRYCREGKFNICK------NQII-PGQTTNGGFSEYMLVKSSRWLVKL-N 138
Query: 154 NIAMDAAAPLLCAGITVFCPMKDN-NLIDSPAKKRXXXXXXXXXXXXAVKFGKAFGHHVT 212
+++ AAPL AG T ++ I A+ ++ KA ++T
Sbjct: 139 SLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNIT 198
Query: 213 VISTSPSKEKEAKEL-LGADEFILSTNAMQMQAGKRT----LDFILDTVSAKHSLGPILE 267
++ S SK+ L LGAD ++ + K T +D V + + + +
Sbjct: 199 IVGISRSKKHRDFALELGAD-YVSEMKDAESLINKLTDGLGASIAIDLVGTEETTYNLGK 257
Query: 268 LLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIE 327
LL G + +VG L +F + + GS G + + ++++ + I I
Sbjct: 258 LLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKIKPYII 317
Query: 328 VIKPDQINEALDRLARNDVRYRFVI 352
+ D IN+A L V R VI
Sbjct: 318 KVPLDDINKAFTNLDEGRVDGRQVI 342
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
+V +K+LY +CHTD + ++P V GHE GI+ VG V + GD + C
Sbjct: 53 EVRVKVLYTALCHTDAYTWSGKDPEGLFPCVLGHEAAGIVESVGEGVTEVQPGDHV-IPC 111
Query: 98 LAAACMECEFCKDSQENYCDKIQ 120
A C EC+FCK + N C K++
Sbjct: 112 YQAECRECKFCKSGKTNLCGKVR 134
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 134/339 (39%), Gaps = 46/339 (13%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
+V IK++ GIC TD H V + +T PV+ GHE GI+ VG V K GD+ +
Sbjct: 35 EVRIKMVAVGICRTDDHVVSGNL-VTPLPVILGHEAAGIVESVGEGVTTVKPGDK-VIPL 92
Query: 98 LAAACMECEFCKDSQENYCDKIQF-TYNGIFWDGSITY-------------GGYSEMLVA 143
C +C CK+ + NYC K G DG+ + +S+ V
Sbjct: 93 FTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 144 DYRFVVHVPENIAMDAAAP-----LLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXX 198
D V + DAA+P L+ G + N +P
Sbjct: 153 DENAVAKI------DAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLS 206
Query: 199 XAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI--------LSTNAMQMQAGKRTLD 250
+ A + + + K +AKE LGA E I + +M G +D
Sbjct: 207 AVMGCKAAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGG--VD 263
Query: 251 FILDTVSAKHS-LGPILELLKVNGTLSVVGAPEAPFELPSFP-LIFGKRSVKGSMTGGMR 308
F + + + + +L + GT +VG P A L P L+ R+ KG++ GG +
Sbjct: 264 FSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKGAVYGGFK 323
Query: 309 ETQEMMNVCG-----KYNITCNIEVIKP-DQINEALDRL 341
+ + + K+++ I + P ++INE D L
Sbjct: 324 SKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLL 362
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 134/339 (39%), Gaps = 46/339 (13%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
+V IK++ GIC TD H V + +T PV+ GHE GI+ VG V K GD+ +
Sbjct: 35 EVRIKMVAVGICRTDDHVVSGNL-VTPLPVILGHEAAGIVESVGEGVTTVKPGDK-VIPL 92
Query: 98 LAAACMECEFCKDSQENYCDKIQF-TYNGIFWDGSITY-------------GGYSEMLVA 143
C +C CK+ + NYC K G DG+ + +S+ V
Sbjct: 93 FTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 144 DYRFVVHVPENIAMDAAAP-----LLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXX 198
D V + DAA+P L+ G + N +P
Sbjct: 153 DENAVAKI------DAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLS 206
Query: 199 XAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI--------LSTNAMQMQAGKRTLD 250
+ A + + + K +AKE LGA E I + +M G +D
Sbjct: 207 AVMGCKAAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGG--VD 263
Query: 251 FILDTVSAKHS-LGPILELLKVNGTLSVVGAPEAPFELPSFP-LIFGKRSVKGSMTGGMR 308
F + + + + +L + GT +VG P A L P L+ R+ KG++ GG +
Sbjct: 264 FSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKGAVYGGFK 323
Query: 309 ETQEMMNVCG-----KYNITCNIEVIKP-DQINEALDRL 341
+ + + K+++ I + P ++INE D L
Sbjct: 324 SKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLL 362
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 150/357 (42%), Gaps = 39/357 (10%)
Query: 29 FKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88
K R+ ++V +K++ G+CHTD+ + + + P V GHE +GII +G NV +
Sbjct: 24 LKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPL-PAVLGHEGSGIIEAIGPNVTELQ 82
Query: 89 VGDRAAVGCLAAACMECEFCKDSQENYCDK-IQFTYNGIFWDGSITYGGYSEMLVADYRF 147
VGD + C +C C YC + ++G +G+ + + +V D+ F
Sbjct: 83 VGDHVVLS--YGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFF 140
Query: 148 ---------------VVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXX 192
V V +++ ++ PL C GI N L +PA
Sbjct: 141 AQSSFATYALSRENNTVKVTKDVPIELLGPLGC-GIQTGAGACINALKVTPASS-FVTWG 198
Query: 193 XXXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLD-- 250
A+ K G + + E + LGA I S + A K D
Sbjct: 199 AGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGG 258
Query: 251 --FILDTVSAKHSLGPILELLKVNGTLSVVGAPE----APFELPSFPLIFGKRSVKGSMT 304
F L++ + L ++ L + G ++VVGAP+ A F++ L+ G +++ G +
Sbjct: 259 VNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVND--LLLGGKTILGVVE 316
Query: 305 GGMRETQ---EMMNVC--GKYNITCNIEVIKPDQINE-ALDRLARNDVRYRFVIDIA 355
G + E++ + GK+ ++ D+IN+ A+D +R + + +I IA
Sbjct: 317 GSGSPKKFIPELVRLYQQGKFPFDQLVKFYAFDEINQAAID--SRKGITLKPIIKIA 371
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 111/268 (41%), Gaps = 26/268 (9%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V +KI G+C +D+ + + G YP+ GHE +G I VGS V + GD AV
Sbjct: 26 DEVRVKIASSGLCGSDLPRIFKN-GAHYYPITLGHEFSGYIDAVGSGVDDLHPGD--AVA 82
Query: 97 CLA-AACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENI 155
C+ C C C + C K F GS GG++E +V + V +P ++
Sbjct: 83 CVPLLPCFTCPECLKGFYSQCAKYDFI-------GSRRDGGFAEYIVVKRKNVFALPTDM 135
Query: 156 AMDAAAPL--LCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFG-HHVT 212
++ A + + G+ F +L K A++ A G VT
Sbjct: 136 PIEDGAFIEPITVGLHAF------HLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVT 189
Query: 213 VISTSPSKEKEAKELLGADEFILS-TNAMQMQAGKRTLDF---ILDTVSAKHSLGPILEL 268
I S K AK F S +A QMQ+ R L F IL+T ++ +E+
Sbjct: 190 AIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEI 249
Query: 269 LKVNGTLSVVGAPEAPFELPSFPLIFGK 296
+ L++VG L S FGK
Sbjct: 250 AGPHAQLALVGTLHQDLHLTS--ATFGK 275
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 134/339 (39%), Gaps = 46/339 (13%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
+V IK++ GIC TD H V + +T PV+ GHE GI+ VG V K GD+ +
Sbjct: 35 EVRIKMVAVGICGTDDHVVSGNL-VTPLPVILGHEAAGIVESVGEGVTTVKPGDK-VIPL 92
Query: 98 LAAACMECEFCKDSQENYCDKIQF-TYNGIFWDGSITY-------------GGYSEMLVA 143
C +C CK+ + NYC K G DG+ + +S+ V
Sbjct: 93 FTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 144 DYRFVVHVPENIAMDAAAP-----LLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXX 198
D V + DAA+P L+ G + N +P
Sbjct: 153 DENAVAKI------DAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLS 206
Query: 199 XAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI--------LSTNAMQMQAGKRTLD 250
+ A + + + K +AKE LGA E I + +M G +D
Sbjct: 207 AVMGCKAAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGG--VD 263
Query: 251 FILDTVSAKHS-LGPILELLKVNGTLSVVGAPEAPFELPSFP-LIFGKRSVKGSMTGGMR 308
F + + + + +L + GT +VG P A L P L+ R+ KG++ GG +
Sbjct: 264 FSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKGAVYGGFK 323
Query: 309 ETQEMMNVCG-----KYNITCNIEVIKP-DQINEALDRL 341
+ + + K+++ I + P ++INE D L
Sbjct: 324 SKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLL 362
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 118/280 (42%), Gaps = 22/280 (7%)
Query: 33 ENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDR 92
E G +D+ +K+ CGIC TD H + ++ T PV GHE GI+ + GS V++ G R
Sbjct: 44 EPGPDDLLVKVEACGICGTDRHLLHGEFPST-PPVTLGHEFCGIVVEAGSAVRDIAPGAR 102
Query: 93 AAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVP 152
G +C C C+ + N C ++ GI D GG++E ++ + +P
Sbjct: 103 IT-GDPNISCGRCPQCQAGRVNLCRNLRAI--GIHRD-----GGFAEYVLVPRKQAFEIP 154
Query: 153 ENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFGHHVT 212
+ +D C + C + +L A V+ + G
Sbjct: 155 --LTLDPVHGAFCEPLA--CCLHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTV 210
Query: 213 VISTSPSKEKEAKELLGADEFI--LSTNAMQMQAGKRTL-----DFILDTVSAKHSLGPI 265
++ST + ++ E +GA + + + ++ AG L D +++ ++
Sbjct: 211 ILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQS 270
Query: 266 LELLKVNGTLSVVGA-PEA-PFELPSFPLIFGKRSVKGSM 303
L K GT+ ++G P+ E+ F ++F + V GS
Sbjct: 271 TRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSF 310
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 142/347 (40%), Gaps = 39/347 (11%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IK++ GIC +D H V + +T PV+ GHE GI+ VG V K GD+ +
Sbjct: 34 HEVRIKMVAAGICRSDEHVVSGNL-VTPLPVILGHEAAGIVESVGEGVTTVKPGDK-VIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQF-TYNGIFWDGSITYGGYSEML-----VADYRFVVH 150
C +C CK+ + NYC K G DG+ + + + V+ +
Sbjct: 92 LFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKPIHHFVGVSTFSQYTV 151
Query: 151 VPENIA--MDAAAPL--LCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKA 206
V EN +DAA+PL +C + C K V
Sbjct: 152 VDENAVAKIDAASPLEKVC---LIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVV 208
Query: 207 FGHHVT----VISTSPSKEKEAK-ELLGADEFI--------LSTNAMQMQAGKRTLDFIL 253
G +I+ +K+K AK + LGA E I + +M G +DF
Sbjct: 209 MGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDG--GVDFSF 266
Query: 254 DTVSAKHS-LGPILELLKVNGTLSVVGAPEAPFELPSFP-LIFGKRSVKGSMTGGMRETQ 311
+ + + + +L + GT +VG P L P L+ R+ KG++ GG + +
Sbjct: 267 EVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLTGRTWKGAIFGGFKSKE 326
Query: 312 EMMNVCG-----KYNITCNIEVIKP-DQINEALDRLARNDVRYRFVI 352
+ + K+++ I + P ++INE D L R+ R V+
Sbjct: 327 SVPKLVADFMAKKFSLDALITNVLPFEKINEGFD-LLRSGKSIRTVL 372
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 129/302 (42%), Gaps = 33/302 (10%)
Query: 26 PYIFKRRENGVNDV-----TIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKV 80
P ++K E ++D+ ++IL G+C +D+H + + P++ GHE G + +V
Sbjct: 29 PLVYKEFE--ISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEV 86
Query: 81 GSNVKN-----FKVGDRAAVGCLAAACMECEFCKDSQENYC--DKIQFTYNGIFWDGSIT 133
++ K GD V C EC +CK S+E Y ++ + N +
Sbjct: 87 NGEKRDLNGELLKPGD-LIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHL 145
Query: 134 YGGYSEMLVADYRF-VVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXX 192
G YS +V D V+ V E +D A +C+G T + + +S A K
Sbjct: 146 RGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAF--DEYPESFAGKTVVIQG 203
Query: 193 XXXXXXXAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTL-- 249
V ++ G +V VI+ SP++ K A+E +GAD L+ ++ ++ +
Sbjct: 204 AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE-IGAD-LTLNRRETSVEERRKAIMD 261
Query: 250 -------DFILDTVSAKHSLGPILELLKVNGTLSVVG--APEAPFELPSFP-LIFGKRSV 299
DFIL+ +L ELL+ G SV G P+ P + L+ +
Sbjct: 262 ITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATF 321
Query: 300 KG 301
KG
Sbjct: 322 KG 323
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 134/340 (39%), Gaps = 41/340 (12%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V I+I+ +CHTD + + + +PV+ GHE GI+ +G V N K GD+ +
Sbjct: 36 HEVRIQIIATSLCHTDATVIDSKFEGLAFPVIVGHEAAGIVESIGPGVTNVKPGDK-VIP 94
Query: 97 CLAAACMECEFCKDSQENYCDKI------------------QFTYNG---IFWDGSITYG 135
A C +C+FC N C KI +FT G + G+ T+
Sbjct: 95 LYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLMEDKTSRFTCKGKPVYHFFGTSTFS 154
Query: 136 GYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXX 195
Y+ +V+D + + ++ ++ L C G + NN +P
Sbjct: 155 QYT--VVSDIN-LAKIDDDANLERVCLLGC-GFSTGYGAAINNAKVTPGSTCAVFGLGGV 210
Query: 196 XXXXAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-----EFILSTNAMQMQAGKRTLD 250
+ A + I + K +AK L D + + ++ K +D
Sbjct: 211 GLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDCLNPRDLHKPIQEVIIELTKGGVD 270
Query: 251 FILDTVSAKHSLGPILELLKVN-GTLSVVGAPEAPFELPSFP--LIFGKRSVKGSMTGGM 307
F LD ++ L+ G+ + +G L FP LI G R++ G+ GG
Sbjct: 271 FALDCAGGSETMKAALDCTTAGWGSCTFIGVAAGSKGLTVFPEELIIG-RTINGTFFGGW 329
Query: 308 RETQEMMNVC-----GKYNITCNIEVIKP-DQINEALDRL 341
+ + + K+N+ + P D+I+EA D +
Sbjct: 330 KSVDSIPKLVTDYKNKKFNLDALVTHTLPFDKISEAFDLM 369
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IKI+ +CHTD + + +PV+ GHE GI+ VG V K GD +
Sbjct: 33 HEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGD-TVIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTY-NGIFWDGS 131
C EC+FC + + N C KI+ T G+ DG+
Sbjct: 92 LYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGT 127
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IKI+ +CHTD + + +PV+ GHE GI+ VG V K GD +
Sbjct: 32 HEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGD-TVIP 90
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTY-NGIFWDGS 131
C EC+FC + + N C KI+ T G+ DG+
Sbjct: 91 LYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGT 126
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IKI+ +CHTD + + +PV+ GHE GI+ VG V K GD +
Sbjct: 33 HEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGD-TVIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTY-NGIFWDGS 131
C EC+FC + + N C KI+ T G+ DG+
Sbjct: 92 LYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGT 127
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 137/334 (41%), Gaps = 34/334 (10%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IK++ GIC TD H V +T PV+ GHE GI+ VG V K GD+ +
Sbjct: 34 HEVRIKMVAVGICGTDDHVVSGTM-VTPLPVILGHEAAGIVESVGEGVTTVKPGDK-VIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTY-NGIFWDGSITYGGYSEML-----VADYRFVVH 150
C +C CK+ + NYC K + G DG+ + + + ++ +
Sbjct: 92 LAIPQCGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFTCRRKPIHHFLGISTFSQYTV 151
Query: 151 VPENIA--MDAAAPL--LC---AGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKF 203
V EN +DAA+PL +C G + N +P +
Sbjct: 152 VDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGC 211
Query: 204 GKAFGHHVTVISTSPSKEKEAKELLGADEFI--------LSTNAMQMQAGKRTLDFILDT 255
A + + + K +AKE LGA E I + +M G +DF +
Sbjct: 212 KAAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGG--VDFSFEV 268
Query: 256 VSAKHS-LGPILELLKVNGTLSVVGAPEAPFELPSFP-LIFGKRSVKGSMTGGMRETQEM 313
+ + + +L + GT +VG P L P L+ R+ KG++ GG + + +
Sbjct: 269 IGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSMNPMLLLTGRTWKGAILGGFKSKECV 328
Query: 314 MNVCG-----KYNITCNIEVIKP-DQINEALDRL 341
+ K+++ I + P ++INE D L
Sbjct: 329 PKLVADFMAKKFSLDALITHVLPFEKINEGFDLL 362
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 106/254 (41%), Gaps = 17/254 (6%)
Query: 33 ENGVNDVTIKILYCGICHTDIHHVKNDWGITM-YPVVPGHEITGIITKVGSNVKNFKVGD 91
E G +V +++ + H D+ K + P V G + +G++ VG V+ F GD
Sbjct: 24 EPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGD 83
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
+ +C CE C ++N C + Q G +G Y+E +V +
Sbjct: 84 EVVINP-GLSCGRCERCLAGEDNLCPRYQIL-------GEHRHGTYAEYVVLPEANLAPK 135
Query: 152 PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFGHHV 211
P+N++ + AA + +T + M + L P A++ K FG V
Sbjct: 136 PKNLSFEEAAAIPLTFLTAWQ-MVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARV 194
Query: 212 TVISTSPSKEKEAKELLGADEFILSTNA-----MQMQAGKRTLDFILDTVSAKHSLGPIL 266
+ S K + AK LGADE + T+ ++ G + D ++D A + G ++
Sbjct: 195 IATAGSEDKLRRAKA-LGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGALYFEG-VI 252
Query: 267 ELLKVNGTLSVVGA 280
+ G +++ GA
Sbjct: 253 KATANGGRIAIAGA 266
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 128/334 (38%), Gaps = 34/334 (10%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
+V I+++ +CHTDI+ + ++PVV GHE GI+ VG V NFK GD+ +
Sbjct: 35 EVRIQVIATCVCHTDINAT-DPKKKALFPVVLGHECAGIVESVGPGVTNFKPGDKV-IPF 92
Query: 98 LAAACMECEFCKDSQENYCDKIQ------------------FTYNGIFWDGSITYGGYSE 139
A C C+ C N C K++ FT G + +S+
Sbjct: 93 FAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQ 152
Query: 140 MLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXX 199
V + V + ++ + C G + N +P
Sbjct: 153 YTVVSEANLARVDDEANLERVCLIGC-GFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSA 211
Query: 200 AVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-----EFILSTNAMQMQAGKRTLDFILD 254
+ A + I + K +AK L D E + + +D+ LD
Sbjct: 212 IIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLD 271
Query: 255 TVSAKHSLGPILELLKVN-GTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEM 313
+L ++ + G+ +VVGA +P+ +I G RS+ G+ GG + +
Sbjct: 272 CAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILG-RSINGTFFGGWKSVDSV 330
Query: 314 MNVCGKY-NITCNIEVIKP-----DQINEALDRL 341
N+ Y N +++++ + IN+A+D +
Sbjct: 331 PNLVSDYKNKKFDLDLLVTHALPFESINDAIDLM 364
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
+V +K+ GIC +D H + YP V GHE G+I VG V++ +VG+R AV
Sbjct: 46 EVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAVDP 105
Query: 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIA 156
+ +C C C + N C + G+ D GG+SE V + +PE +A
Sbjct: 106 V-VSCGHCYPCSIGKPNVCTTLAVL--GVHAD-----GGFSEYAVVPAKNAWKIPEAVA 156
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IKI+ +CHTD + + +PV+ GH GI+ VG V K GD +
Sbjct: 32 HEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGD-TVIP 90
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTY-NGIFWDGS 131
C EC+FC + + N C KI+ T G+ DG+
Sbjct: 91 LYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGT 126
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVP 69
++ V W H P T + + ++V IKIL GIC +D V + + +PV+
Sbjct: 11 KAAVAWEPHKPLSLETITVAPPK---AHEVRIKILASGICGSD-SSVLKEIIPSKFPVIL 66
Query: 70 GHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDK 118
GHE G++ +G+ V K GD+ + C C CK S N+C+K
Sbjct: 67 GHEAVGVVESIGAGVTCVKPGDK-VIPLFVPQCGSCRACKSSNSNFCEK 114
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 13/125 (10%)
Query: 2 AQTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG 61
A PN+ VV H P G + + E G N+V +++ GIC +D+H+ ++G
Sbjct: 2 AAAKPNNLSLVV----HGP-GDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYW--EYG 54
Query: 62 -----ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYC 116
I P+V GHE +G + KVGS+VK+ K GDR A+ A EFCK + N
Sbjct: 55 RIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIE-PGAPRENDEFCKMGRYNLS 113
Query: 117 DKIQF 121
I F
Sbjct: 114 PSIFF 118
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 22/141 (15%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IK++ GIC +D H V +T PV+ GHE GI+ +G V + GD+ +
Sbjct: 34 HEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDK-VIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTY-NGIFWDGSITY-------------GGYSEMLV 142
C +C CK + N+C K + G DG+ + +S+ V
Sbjct: 92 LFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTV 151
Query: 143 ADYRFVVHVPENIAMDAAAPL 163
D V + DAA+PL
Sbjct: 152 VDEISVAKI------DAASPL 166
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 22/141 (15%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IK++ GIC +D H V +T PV+ GHE GI+ +G V + GD+ +
Sbjct: 34 HEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDK-VIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTY-NGIFWDGSITY-------------GGYSEMLV 142
C +C CK + N+C K + G DG+ + +S+ V
Sbjct: 92 LFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTV 151
Query: 143 ADYRFVVHVPENIAMDAAAPL 163
D V + DAA+PL
Sbjct: 152 VDEISVAKI------DAASPL 166
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 22/141 (15%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IK++ GIC +D H V +T PV+ GHE GI+ +G V + GD+ +
Sbjct: 34 HEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDK-VIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTY-NGIFWDGSITY-------------GGYSEMLV 142
C +C CK + N+C K + G DG+ + +S+ V
Sbjct: 92 LFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTV 151
Query: 143 ADYRFVVHVPENIAMDAAAPL 163
D V + DAA+PL
Sbjct: 152 VDEISVAKI------DAASPL 166
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 22/141 (15%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IK++ GIC +D H V +T PV+ GHE GI+ +G V + GD+ +
Sbjct: 34 HEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDK-VIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTY-NGIFWDGSITY-------------GGYSEMLV 142
C +C CK + N+C K + G DG+ + +S+ V
Sbjct: 92 LFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTV 151
Query: 143 ADYRFVVHVPENIAMDAAAPL 163
D V + DAA+PL
Sbjct: 152 VDEISVAKI------DAASPL 166
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 22/141 (15%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IK++ GIC +D H V +T PV+ GHE GI+ +G V + GD+ +
Sbjct: 34 HEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDK-VIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTY-NGIFWDGSITY-------------GGYSEMLV 142
C +C CK + N+C K + G DG+ + +S+ V
Sbjct: 92 LFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTV 151
Query: 143 ADYRFVVHVPENIAMDAAAPL 163
D V + DAA+PL
Sbjct: 152 VDEISVAKI------DAASPL 166
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 22/141 (15%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IK++ GIC +D H V +T PV+ GHE GI+ +G V + GD+ +
Sbjct: 34 HEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDK-VIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTY-NGIFWDGSITY-------------GGYSEMLV 142
C +C CK + N+C K + G DG+ + +S+ V
Sbjct: 92 LFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTV 151
Query: 143 ADYRFVVHVPENIAMDAAAPL 163
D V + DAA+PL
Sbjct: 152 VDEISVAKI------DAASPL 166
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 22/141 (15%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IK++ GIC +D H V +T PV+ GHE GI+ +G V + GD+ +
Sbjct: 34 HEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDK-VIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTY-NGIFWDGSITY-------------GGYSEMLV 142
C +C CK + N+C K + G DG+ + +S+ V
Sbjct: 92 LATPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTV 151
Query: 143 ADYRFVVHVPENIAMDAAAPL 163
D V + DAA+PL
Sbjct: 152 VDEISVAKI------DAASPL 166
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 13/125 (10%)
Query: 2 AQTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG 61
A PN+ VV H P G + + E G N+V ++ GIC +D+H+ ++G
Sbjct: 2 AAAKPNNLSLVV----HGP-GDLRLENYPIPEPGPNEVLLRXHSVGICGSDVHYW--EYG 54
Query: 62 -----ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYC 116
I P V GHE +G + KVGS+VK+ K GDR A+ A EFCK + N
Sbjct: 55 RIGNFIVKKPXVLGHEASGTVEKVGSSVKHLKPGDRVAIE-PGAPRENDEFCKXGRYNLS 113
Query: 117 DKIQF 121
I F
Sbjct: 114 PSIFF 118
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 127/334 (38%), Gaps = 34/334 (10%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
+V I+++ +C TDI+ + ++PVV GHE GI+ VG V NFK GD+ +
Sbjct: 35 EVRIQVIATCVCPTDINAT-DPKKKALFPVVLGHECAGIVESVGPGVTNFKPGDKV-IPF 92
Query: 98 LAAACMECEFCKDSQENYCDKIQ------------------FTYNGIFWDGSITYGGYSE 139
A C C+ C N C K++ FT G + +S+
Sbjct: 93 FAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQ 152
Query: 140 MLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXX 199
V + V + ++ + C G + N +P
Sbjct: 153 YTVVSEANLARVDDEANLERVCLIGC-GFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSA 211
Query: 200 AVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-----EFILSTNAMQMQAGKRTLDFILD 254
+ A + I + K +AK L D E + + +D+ LD
Sbjct: 212 IIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLD 271
Query: 255 TVSAKHSLGPILELLKVN-GTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEM 313
+L ++ + G+ +VVGA +P+ +I G RS+ G+ GG + +
Sbjct: 272 CAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILG-RSINGTFFGGWKSVDSV 330
Query: 314 MNVCGKY-NITCNIEVIKP-----DQINEALDRL 341
N+ Y N +++++ + IN+A+D +
Sbjct: 331 PNLVSDYKNKKFDLDLLVTHALPFESINDAIDLM 364
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 22/141 (15%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IK++ GIC +D H V +T PV+ GHE GI+ +G V + GD+ +
Sbjct: 34 HEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDK-VIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTY-NGIFWDGSITY-------------GGYSEMLV 142
C +C CK + N+C K + G DG+ + +S+ V
Sbjct: 92 LWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTV 151
Query: 143 ADYRFVVHVPENIAMDAAAPL 163
D V + DAA+PL
Sbjct: 152 VDEISVAKI------DAASPL 166
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 22/141 (15%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IK++ GIC +D H V +T PV+ GHE GI+ +G V + GD+ +
Sbjct: 34 HEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDK-VIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTY-NGIFWDGSITY-------------GGYSEMLV 142
C +C CK + N+C K + G DG+ + +S+ V
Sbjct: 92 LWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTV 151
Query: 143 ADYRFVVHVPENIAMDAAAPL 163
D V + DAA+PL
Sbjct: 152 VDEISVAKI------DAASPL 166
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 15/106 (14%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDW-------GITMYPVVPGHEITGIITKVGSNVKNFKV 89
++ IK+ CGIC +D+H + D G+T +PV GHE +G++ + G N +
Sbjct: 56 TEIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRT 115
Query: 90 GDRAAVGCLAAA-----CMECEFCKDSQENYCDKIQ---FTYNGIF 127
R +G A C C C + N+C+ + F +G F
Sbjct: 116 NKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENLNELGFNVDGAF 161
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 33 ENGVNDVTIKILYCGICHTDIHHVKN----DWGITMYPVVPGHEITGIITKVGSNVKNFK 88
E G N+V +K+ GIC +D+H+ ++ D+ + P+V GHE +G + KVGS V++ +
Sbjct: 27 EPGPNEVLLKMHSVGICGSDVHYWQHGRIGDF-VVKKPMVLGHEASGTVVKVGSLVRHLQ 85
Query: 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQF 121
GDR A+ A + EFCK + N I F
Sbjct: 86 PGDRVAIQPGAPRQTD-EFCKIGRYNLSPTIFF 117
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IK++ GIC +D H V + PV+ GHE GI+ +G V + GD+ +
Sbjct: 34 HEVRIKMVAAGICRSDDHVVSGTL-VAPLPVIAGHEAAGIVESIGEGVTTVRPGDK-VIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITY 134
C +C CK + N C K G DG+ +
Sbjct: 92 LFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRF 129
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IK++ GIC +D H V + PV+ GHE GI+ +G V + GD+ +
Sbjct: 34 HEVRIKMVAAGICRSDDHVVSGTL-VAPLPVIAGHEAAGIVESIGEGVTTVRPGDK-VIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITY-------------GGYSEMLVA 143
C +C CK + N C K G DG+ + +S+ V
Sbjct: 92 LFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 151
Query: 144 DYRFVVHVPENIAMDAAAPL 163
D V + DAA+PL
Sbjct: 152 DEISVAKI------DAASPL 165
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 22/141 (15%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IK++ GIC +D V +T PV+ GHE GI+ +G V + GD+ +
Sbjct: 34 HEVRIKMVATGICRSDDQVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDK-VIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTY-NGIFWDGSITY-------------GGYSEMLV 142
C +C CK + N+C K + G DG+ + +S+ V
Sbjct: 92 LFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTV 151
Query: 143 ADYRFVVHVPENIAMDAAAPL 163
D V + DAA+PL
Sbjct: 152 VDEISVAKI------DAASPL 166
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 110/260 (42%), Gaps = 35/260 (13%)
Query: 35 GVNDVTIKILYCGICHTDIH-HVKNDWGITMY--PVVPGHEITGIITKVGSNVKNFKVGD 91
G +V IK+L IC TD+H + N+W + P + GHE+ G + ++G V+ +VGD
Sbjct: 27 GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGD 86
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
+V C +C C+ Q + C + IF G T G ++E V + +
Sbjct: 87 YVSVET-HIVCGKCYACRRGQYHVCQNTK-----IF--GVDTDGVFAEYAVVPAQNIWKN 138
Query: 152 PENIAMDAAA---PLLCAGITVFC-PMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAF 207
P++I + A PL A TV P+ +++ + A + KA
Sbjct: 139 PKSIPPEYATLQEPLGNAVDTVLAGPISGKSVLITGAGP---------LGLLGIAVAKAS 189
Query: 208 GHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRT--------LDFILDTVSAK 259
G + ++S +E + +GAD I N + K +D L+ A
Sbjct: 190 GAYPVIVSEPSDFRRELAKKVGADYVI---NPFEEDVVKEVXDITDGNGVDVFLEFSGAP 246
Query: 260 HSLGPILELLKVNGTLSVVG 279
+L L+ + G +S++G
Sbjct: 247 KALEQGLQAVTPAGRVSLLG 266
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 110/260 (42%), Gaps = 35/260 (13%)
Query: 35 GVNDVTIKILYCGICHTDIH-HVKNDWGITMY--PVVPGHEITGIITKVGSNVKNFKVGD 91
G +V IK+L IC TD+H + N+W + P + GHE+ G + ++G V+ +VGD
Sbjct: 28 GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGD 87
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
+V C +C C+ Q + C + IF G T G ++E V + +
Sbjct: 88 YVSVET-HIVCGKCYACRRGQYHVCQNTK-----IF--GVDTDGVFAEYAVVPAQNIWKN 139
Query: 152 PENIAMDAAA---PLLCAGITVFC-PMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAF 207
P++I + A PL A TV P+ +++ + A + KA
Sbjct: 140 PKSIPPEYATLQEPLGNAVDTVLAGPISGKSVLITGAGP---------LGLLGIAVAKAS 190
Query: 208 GHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRT--------LDFILDTVSAK 259
G + ++S +E + +GAD I N + K +D L+ A
Sbjct: 191 GAYPVIVSEPSDFRRELAKKVGADYVI---NPFEEDVVKEVXDITDGNGVDVFLEFSGAP 247
Query: 260 HSLGPILELLKVNGTLSVVG 279
+L L+ + G +S++G
Sbjct: 248 KALEQGLQAVTPAGRVSLLG 267
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 33 ENGVNDVTIKILYCGICHTDIHHVKND-W--GITMYPVVPGHEITGIITKVGSNVKNFKV 89
E G ++ +++ IC TD+H K D W G P+V GHE +G++ VG V+ +V
Sbjct: 22 EPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQV 81
Query: 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVV 149
GD ++ C C C+ + C Q G+ D GG++E +V
Sbjct: 82 GDHVSLES-HIVCHACPACRTGNYHVCLNTQIL--GVDRD-----GGFAEYVVVPAENAW 133
Query: 150 HVPENIAMDAAAPL 163
P+++ + AA L
Sbjct: 134 VNPKDLPFEVAAIL 147
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 35 GVNDVTIKILYCGICHTDIH-HVKNDWGITMY--PVVPGHEITGIITKVGSNVKNFKVGD 91
G +V IK+L IC TD+H + N+W + P + GHE+ G + +VG V++ +VGD
Sbjct: 28 GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVEDLQVGD 87
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQF---TYNGIF 127
+V C +C CK ++ + C + +G+F
Sbjct: 88 YISVET-HIVCGKCYACKHNRYHVCQNTKIFGVDMDGVF 125
>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase
pdb|1KOL|B Chain B, Crystal Structure Of Formaldehyde Dehydrogenase
Length = 398
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 26/158 (16%)
Query: 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGII 77
DP GK + E+GV +K++ IC +D H V+ +V GHEITG +
Sbjct: 25 QDPRGK-------KIEHGV---ILKVVSTNICGSDQHMVRGRT-TAQVGLVLGHEITGEV 73
Query: 78 TKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITY--- 134
+ G +V+N ++GD +V AC C CK+ C T N G+ Y
Sbjct: 74 IEKGRDVENLQIGDLVSV-PFNVACGRCRSCKEMHTGVC----LTVNPARAGGAYGYVDM 128
Query: 135 ----GGYSEMLV---ADYRFVVHVPENIAMDAAAPLLC 165
GG +E ++ AD+ + + AM+ L C
Sbjct: 129 GDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTC 166
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 38 DVTIKILYCGICHTDIHHVKNDW---GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
+VT+ + GIC +D+H K+ I V GHE G + V +VK+ KVGDR A
Sbjct: 42 EVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVA 101
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQF 121
+ C CE C + N C+++ F
Sbjct: 102 IE-PQVICNACEPCLTGRYNGCERVDF 127
>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase
pdb|2DPH|B Chain B, Crystal Structure Of Formaldehyde Dismutase
Length = 398
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 39 VTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCL 98
V +K++ IC +D H + + + V+ GHEITG + + GS+V+ +GD +V
Sbjct: 35 VILKVVSTNICGSDQHIYRGRFIVPKGHVL-GHEITGEVVEKGSDVELMDIGDLVSV-PF 92
Query: 99 AAACMECEFCKDSQENYCD 117
AC C CK+++ + C+
Sbjct: 93 NVACGRCRNCKEARSDVCE 111
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 3/131 (2%)
Query: 30 KRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89
+R G D ++ L C +DIH V ++ GHE G + +VGS VK+FK
Sbjct: 18 ERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKP 77
Query: 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVV 149
GDR V C E Q++ + F DG +G Y + AD +
Sbjct: 78 GDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDG--VFGEYFHVNDADMNLAI 135
Query: 150 HVPENIAMDAA 160
+P+++ ++ A
Sbjct: 136 -LPKDMPLENA 145
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
Length = 352
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
D ++ L C +DIH V + ++ GHE G + +VGS VK+FK GDR V
Sbjct: 26 DAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPA 85
Query: 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAM 157
+ E + ++ + DG +G + + AD H+P+ I +
Sbjct: 86 ITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDG--VFGEFFHVNDADMNL-AHLPKEIPL 142
Query: 158 DAA 160
+AA
Sbjct: 143 EAA 145
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
D ++ L C +DIH V + ++ GHE G + +VGS VK+FK GDR V
Sbjct: 26 DAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPA 85
Query: 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAM 157
+ E + ++ + DG +G + + AD H+P+ I +
Sbjct: 86 ITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDG--VFGEFFHVNDADMNL-AHLPKEIPL 142
Query: 158 DAA 160
+AA
Sbjct: 143 EAA 145
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 3/131 (2%)
Query: 30 KRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89
+R G D ++ L C +DIH V ++ GHE G + +VGS VK+FK
Sbjct: 18 ERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKP 77
Query: 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVV 149
GDR V C E Q++ + F DG +G Y + AD +
Sbjct: 78 GDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDG--VFGEYFHVNDADMNLAI 135
Query: 150 HVPENIAMDAA 160
+P+++ ++ A
Sbjct: 136 -LPKDMPLENA 145
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
D ++ L C +DIH V + ++ GHE G + +VGS VK+FK GDR V
Sbjct: 26 DAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPA 85
Query: 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAM 157
+ E + ++ + DG +G + + AD H+P+ I +
Sbjct: 86 ITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDG--VFGEFFHVNDADMNL-AHLPKEIPL 142
Query: 158 DAA 160
+AA
Sbjct: 143 EAA 145
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
D ++ L C +DIH V + ++ GHE G + +VGS VK+FK GDR V
Sbjct: 26 DAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPA 85
Query: 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAM 157
+ E + ++ + DG +G + + AD H+P+ I +
Sbjct: 86 ITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDG--VFGEFFHVNDADMNL-AHLPKEIPL 142
Query: 158 DAA 160
+AA
Sbjct: 143 EAA 145
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 3/131 (2%)
Query: 30 KRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89
+R G D ++ L C +DIH V ++ GHE G + +VGS VK+FK
Sbjct: 18 ERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKP 77
Query: 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVV 149
GDR V C E Q++ + F DG +G Y + AD +
Sbjct: 78 GDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDG--VFGEYFHVNDADMNLAI 135
Query: 150 HVPENIAMDAA 160
+P+++ ++ A
Sbjct: 136 -LPKDMPLENA 145
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 76/206 (36%), Gaps = 36/206 (17%)
Query: 29 FKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88
F+ G V ++ G+ D ++ + P G E G++ VG V FK
Sbjct: 21 FEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFK 80
Query: 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFV 148
VGDR A G G + G YSE+ V +
Sbjct: 81 VGDRVAYGT--------------------------------GPL--GAYSEVHVLPEANL 106
Query: 149 VHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFG 208
V + ++++ + AA L+ G+TV ++ + P + A ++ KA G
Sbjct: 107 VKLADSVSFEQAAALMLKGLTVQYLLRQTYQV-KPGEIILFHAAAGGVGSLACQWAKALG 165
Query: 209 HHVTVISTSPSKEKEAKELLGADEFI 234
+ +SP K AK LGA E I
Sbjct: 166 AKLIGTVSSPEKAAHAKA-LGAWETI 190
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
D ++ L C +DIH V + ++ GHE G + +VGS VK+FK GDR V
Sbjct: 26 DAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPA 85
Query: 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAM 157
+ E + ++ + DG +G + + AD H+P+ I +
Sbjct: 86 ITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDG--VFGEFFHVNDADMNL-AHLPKEIPL 142
Query: 158 DAA 160
+AA
Sbjct: 143 EAA 145
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%)
Query: 30 KRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89
+R G D ++ L C +DIH V ++ GHE G + +VGS VK+FK
Sbjct: 18 ERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKP 77
Query: 90 GDRAAVGC 97
GDR V C
Sbjct: 78 GDRVIVPC 85
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Query: 22 GKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVG 81
G+I K E G D ++ L C +D H V + ++ GHE G I KVG
Sbjct: 10 GRIGWIEKKIPECGPLDALVRPLALAPCTSDTHTVWAGAIGDRHDMILGHEAVGQIVKVG 69
Query: 82 SNVKNFKVGDRAAVGCLAAACMECEFCKDSQENY 115
S VK KVGD+ V + E E SQ Y
Sbjct: 70 SLVKRLKVGDKVIVPAITPDWGEEE----SQRGY 99
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of
Human Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of
Human Fas Ii
Length = 344
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGIT-MYPVVPGHEITGIITKVGSNVKNFKVGD 91
+DV +K+L I +DI+ ++ ++G+ P V G+E + VGSNV K GD
Sbjct: 42 SDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGD 97
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Query: 22 GKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVG 81
G+I K E G D ++ L C +D H V + ++ GHE G I KVG
Sbjct: 10 GRIGWIEKKIPECGPLDALVRPLALAPCTSDTHTVWAGAIGDRHDMILGHEAVGQIVKVG 69
Query: 82 SNVKNFKVGDRAAVGCLAAACMECEFCKDSQENY 115
S VK KVGD+ V + E E SQ Y
Sbjct: 70 SLVKRLKVGDKVIVPAITPDWGEEE----SQRGY 99
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGIT-MYPVVPGHEITGIITKVGSNVKNFKVGD 91
+DV +K+L I +DI+ ++ ++G+ P V G+E + VGSNV K GD
Sbjct: 55 SDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGD 110
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 99/255 (38%), Gaps = 53/255 (20%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGIT-MYPVVPGHEITGIITKVGSNVKNFKVGDRAAV 95
+ V IK+ CG+ + + + + P PG ++ G+I VG N FK GDR
Sbjct: 58 HQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDR--- 114
Query: 96 GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENI 155
+F +I+ GGY+E +A V +PE +
Sbjct: 115 ------------------------------VFTSSTIS-GGYAEYALAADHTVYKLPEKL 143
Query: 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXX----XXAVKFGKAFGHHV 211
A + GI F + LI S K A + +A+G +
Sbjct: 144 DFKQGAAI---GIPYFTAYR--ALIHSACVKAGESVLVHGASGGVGLAACQIARAYG--L 196
Query: 212 TVISTSPSKEKEAKELL-GADEF-----ILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI 265
++ T+ ++E + L GA E + + ++ G++ +D I++ + A +L
Sbjct: 197 KILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEML-ANVNLSKD 255
Query: 266 LELLKVNGTLSVVGA 280
L LL G + VVG+
Sbjct: 256 LSLLSHGGRVIVVGS 270
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 97/254 (38%), Gaps = 57/254 (22%)
Query: 38 DVTIKILYCGICHTDIH-HVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++ I++ CG+ D+ N P+VPG E +GI+ +G +VK +++GDR
Sbjct: 32 ELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVM-- 89
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIA 156
+ Y ++E++ FV +P++++
Sbjct: 90 ---------------------------------AFVNYNAWAEVVCTPVEFVYKIPDDMS 116
Query: 157 MDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFGH------H 210
AA +T + ++ A R V G+A +
Sbjct: 117 FSEAAAFPMNFVTAYV------MLFEVANLREGMSVLVHSAGGGV--GQAVAQLCSTVPN 168
Query: 211 VTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRT----LDFILDTVSAKHSLGPIL 266
VTV T+ + + EA + + + NA +Q KR +D +LD + ++ G L
Sbjct: 169 VTVFGTASTFKHEA--IKDSVTHLFDRNADYVQEVKRISAEGVDIVLDCLCGDNT-GKGL 225
Query: 267 ELLKVNGTLSVVGA 280
LLK GT + G+
Sbjct: 226 SLLKPLGTYILYGS 239
>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
pdb|2VN8|B Chain B, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
Length = 375
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 76/197 (38%), Gaps = 39/197 (19%)
Query: 65 YPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYN 124
+P+ G +++G++ + G +VK FK GD + AA +
Sbjct: 94 FPLTLGRDVSGVVMECGLDVKYFKPGDE-----VWAAVPPWK------------------ 130
Query: 125 GIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPM-KDNNLIDS- 182
G SE +V V H P+++ AA L +T + + K L D
Sbjct: 131 ---------QGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKN 181
Query: 183 -PAKKRXXXXXXXXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI--LSTNA 239
K+ A++ KA+ HVT + + + E K LGAD+ I S +
Sbjct: 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRK--LGADDVIDYKSGSV 239
Query: 240 MQMQAGKRTLDFILDTV 256
+ + DFILD V
Sbjct: 240 EEQLKSLKPFDFILDNV 256
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 99/260 (38%), Gaps = 47/260 (18%)
Query: 33 ENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDR 92
E V+++ +KI + D D ++ P V G + G++ VG+ V F GD
Sbjct: 29 EPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIGVVESVGNEVTMFNQGDI 86
Query: 93 AAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGY-SEMLVADYRFVVHV 151
+++ GS G +E + + R V
Sbjct: 87 ---------------------------------VYYSGSPDQNGSNAEYQLINERLVAKA 113
Query: 152 PENIAMDAAAPLLCAGITVFCPMKD-----NNLIDSPAKKRXXXXXXXXXXXXAVKFGKA 206
P+NI+ + A L GIT + + D N ++ K A + KA
Sbjct: 114 PKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKA 173
Query: 207 FGHHVTVISTSPSKEK-EAKELLGADEFILSTNAMQMQ---AGKRTLDFILDTVSAKHSL 262
+G + VI+T+ E E + +GAD + ++ Q G +D++ T +
Sbjct: 174 YG--LRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDMYY 231
Query: 263 GPILELLKVNGTLSVVGAPE 282
+++L+K G ++ + A E
Sbjct: 232 DDMIQLVKPRGHIATIVAFE 251
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDR 92
N++ ++ GI D + + P G E GI++KVGS VK+ K GDR
Sbjct: 29 NEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDR 84
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 68 VPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIF 127
V G ++ G++ + G V ++ GD CL+ +E E + D Q
Sbjct: 120 VIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLS---VELESSDGHNDTMLDPEQR-----I 171
Query: 128 WDGSITYGGYSEMLVADYRFVVHVPENIAM-DAAAPLLC 165
W +GG +E+ + ++ P++++ +AAAP L
Sbjct: 172 WGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLV 210
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
++ IK Y G+ + + + K + P V G E +G + G V NF+VGD+ A
Sbjct: 37 ELLIKNKYTGVNYIESYFRKGIYPCEK-PYVLGREASGTVVAKGKGVTNFEVGDQVA 92
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 70 GHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWD 129
G ++ G++ + G V ++ GD CL+ +E E + D Q W
Sbjct: 140 GSDLAGVVLRTGPGVNAWQPGDEVVAHCLS---VELESPDGHDDTMLDPEQR-----IWG 191
Query: 130 GSITYGGYSEMLVADYRFVVHVPENIAM-DAAAPLLC 165
+GG +E+ + ++ P+++ +AAAP L
Sbjct: 192 FETNFGGLAEIALVKTNQLMPKPKHLTWEEAAAPGLV 228
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 11/154 (7%)
Query: 132 ITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXX 191
+ GG +E + ++ +PE ++ + AA + +T + +K P +K
Sbjct: 76 VPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ--ARPGEKVLVQA 133
Query: 192 XXXXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKEL-LGADEFILSTNAMQMQAGKRTLD 250
AV+ +A G V ++ P EK A L LGA+E + LD
Sbjct: 134 AAGALGTAAVQVARAMGLRVLAAASRP--EKLALPLALGAEEAATYAEVPERAKAWGGLD 191
Query: 251 FILDTV--SAKHSLGPILELLKVNGTLSVVGAPE 282
+L+ + SLG LL G L +GA E
Sbjct: 192 LVLEVRGKEVEESLG----LLAHGGRLVYIGAAE 221
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 69/171 (40%), Gaps = 12/171 (7%)
Query: 132 ITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXX 191
+ GG +E + ++ +PE ++ + AA + +T + +K P +K
Sbjct: 76 VPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ--ARPGEKVLVQA 133
Query: 192 XXXXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKEL-LGADEFILSTNAMQMQAGKRTLD 250
AV+ +A G V ++ P EK A L LGA+E + LD
Sbjct: 134 AAGALGTAAVQVARAXGLRVLAAASRP--EKLALPLALGAEEAATYAEVPERAKAWGGLD 191
Query: 251 FILDTV--SAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSV 299
+L+ + SLG LL G L +GA E P PL +R++
Sbjct: 192 LVLEVRGKEVEESLG----LLAHGGRLVYIGAAEGEVA-PIPPLRLXRRNL 237
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 27.7 bits (60), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 66 PVVPGHEITGIITKVGSNVKNFKVGDR 92
P+V G E ++ +VG V +F VG+R
Sbjct: 61 PIVVGFEAAAVVEEVGPGVTDFTVGER 87
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,768,835
Number of Sequences: 62578
Number of extensions: 432140
Number of successful extensions: 1266
Number of sequences better than 100.0: 98
Number of HSP's better than 100.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1045
Number of HSP's gapped (non-prelim): 105
length of query: 360
length of database: 14,973,337
effective HSP length: 100
effective length of query: 260
effective length of database: 8,715,537
effective search space: 2266039620
effective search space used: 2266039620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)