Query 018158
Match_columns 360
No_of_seqs 137 out of 1454
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 06:37:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018158.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018158hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 3.7E-69 8E-74 477.2 34.2 332 10-355 4-338 (339)
2 KOG0023 Alcohol dehydrogenase, 100.0 1.2E-64 2.5E-69 433.4 31.6 349 3-357 4-357 (360)
3 KOG0024 Sorbitol dehydrogenase 100.0 4.9E-57 1.1E-61 387.6 29.6 331 10-355 5-353 (354)
4 PLN02586 probable cinnamyl alc 100.0 1E-55 2.3E-60 410.2 35.7 347 7-355 8-354 (360)
5 COG1062 AdhC Zn-dependent alco 100.0 3E-56 6.5E-61 386.2 29.6 334 14-354 5-366 (366)
6 PLN02178 cinnamyl-alcohol dehy 100.0 1E-53 2.2E-58 398.1 36.4 344 10-355 5-349 (375)
7 PLN02514 cinnamyl-alcohol dehy 100.0 1.1E-52 2.5E-57 389.8 37.4 345 11-357 9-353 (357)
8 TIGR02822 adh_fam_2 zinc-bindi 100.0 2.7E-51 5.8E-56 376.3 34.0 323 14-352 3-328 (329)
9 cd08281 liver_ADH_like1 Zinc-d 100.0 7E-51 1.5E-55 380.0 35.4 338 10-352 1-371 (371)
10 KOG0022 Alcohol dehydrogenase, 100.0 2.6E-51 5.7E-56 349.6 28.2 331 18-354 14-375 (375)
11 cd08239 THR_DH_like L-threonin 100.0 1.2E-50 2.6E-55 374.5 35.1 329 10-354 1-339 (339)
12 PRK09880 L-idonate 5-dehydroge 100.0 1.7E-50 3.7E-55 373.7 33.5 324 19-354 11-343 (343)
13 COG0604 Qor NADPH:quinone redu 100.0 4E-50 8.6E-55 364.7 30.7 309 10-354 1-326 (326)
14 TIGR03451 mycoS_dep_FDH mycoth 100.0 3.5E-49 7.5E-54 367.0 35.6 336 10-353 2-357 (358)
15 TIGR02818 adh_III_F_hyde S-(hy 100.0 6.5E-49 1.4E-53 366.1 35.1 337 10-354 2-368 (368)
16 PLN02827 Alcohol dehydrogenase 100.0 9.6E-49 2.1E-53 365.7 36.1 336 10-355 13-377 (378)
17 PLN02740 Alcohol dehydrogenase 100.0 6.9E-49 1.5E-53 367.6 34.9 337 10-354 11-381 (381)
18 COG1063 Tdh Threonine dehydrog 100.0 6.8E-49 1.5E-53 361.3 32.8 329 19-354 8-350 (350)
19 TIGR03201 dearomat_had 6-hydro 100.0 4E-48 8.6E-53 358.7 33.9 323 19-354 6-349 (349)
20 cd08230 glucose_DH Glucose deh 100.0 3.8E-48 8.3E-53 359.7 32.6 331 10-354 1-355 (355)
21 cd08301 alcohol_DH_plants Plan 100.0 1.1E-47 2.4E-52 358.4 35.6 335 10-352 3-368 (369)
22 KOG1197 Predicted quinone oxid 100.0 1.1E-48 2.3E-53 323.9 25.0 318 2-359 2-335 (336)
23 cd08300 alcohol_DH_class_III c 100.0 1.3E-47 2.9E-52 357.5 35.6 336 10-353 3-368 (368)
24 cd08277 liver_alcohol_DH_like 100.0 2.4E-47 5.2E-52 355.5 36.1 333 14-353 5-365 (365)
25 TIGR02819 fdhA_non_GSH formald 100.0 1.2E-47 2.5E-52 359.1 34.0 334 10-355 3-391 (393)
26 PRK10309 galactitol-1-phosphat 100.0 1E-46 2.2E-51 349.3 33.3 328 10-354 1-346 (347)
27 cd08296 CAD_like Cinnamyl alco 100.0 3.5E-46 7.5E-51 343.8 35.1 330 10-353 1-333 (333)
28 cd08237 ribitol-5-phosphate_DH 100.0 4.9E-47 1.1E-51 349.9 27.9 314 19-355 9-340 (341)
29 cd05283 CAD1 Cinnamyl alcohol 100.0 9.4E-46 2E-50 341.4 34.3 335 15-353 3-337 (337)
30 cd08231 MDR_TM0436_like Hypoth 100.0 7.9E-45 1.7E-49 338.5 35.1 335 15-354 4-361 (361)
31 cd08233 butanediol_DH_like (2R 100.0 9.1E-45 2E-49 336.8 34.1 328 10-352 1-350 (351)
32 TIGR01202 bchC 2-desacetyl-2-h 100.0 2E-44 4.4E-49 327.9 28.7 292 20-353 9-308 (308)
33 cd08285 NADP_ADH NADP(H)-depen 100.0 1E-42 2.2E-47 323.1 34.2 333 10-354 1-351 (351)
34 cd05284 arabinose_DH_like D-ar 100.0 1.3E-42 2.9E-47 320.9 34.1 331 10-354 1-340 (340)
35 PRK10083 putative oxidoreducta 100.0 1.8E-42 3.8E-47 320.0 34.0 321 21-355 9-338 (339)
36 cd08299 alcohol_DH_class_I_II_ 100.0 3E-42 6.5E-47 321.7 34.8 336 10-354 8-373 (373)
37 cd08238 sorbose_phosphate_red 100.0 1.1E-42 2.4E-47 328.5 32.1 319 12-355 3-369 (410)
38 PRK09422 ethanol-active dehydr 100.0 4.6E-42 1E-46 317.1 35.1 318 26-355 15-337 (338)
39 cd08278 benzyl_alcohol_DH Benz 100.0 4.5E-42 9.7E-47 320.0 35.2 335 10-353 3-365 (365)
40 cd08246 crotonyl_coA_red croto 100.0 2.4E-42 5.2E-47 325.2 33.5 339 5-353 9-392 (393)
41 cd08283 FDH_like_1 Glutathione 100.0 1.1E-41 2.4E-46 319.5 35.1 337 10-354 1-386 (386)
42 cd08291 ETR_like_1 2-enoyl thi 100.0 3.7E-42 8.1E-47 315.8 29.5 303 10-353 1-324 (324)
43 cd08240 6_hydroxyhexanoate_dh_ 100.0 2.1E-41 4.5E-46 314.2 34.3 326 18-354 7-350 (350)
44 PLN03154 putative allyl alcoho 100.0 1.5E-41 3.1E-46 314.1 31.5 314 1-356 1-347 (348)
45 cd05278 FDH_like Formaldehyde 100.0 4.7E-41 1E-45 311.5 34.9 325 21-354 9-347 (347)
46 cd08297 CAD3 Cinnamyl alcohol 100.0 6.5E-41 1.4E-45 309.8 35.7 333 10-354 1-341 (341)
47 TIGR01751 crot-CoA-red crotony 100.0 2.4E-41 5.2E-46 318.6 33.3 343 4-358 3-391 (398)
48 cd08260 Zn_ADH6 Alcohol dehydr 100.0 6.5E-41 1.4E-45 310.3 35.1 331 10-353 1-344 (345)
49 PRK13771 putative alcohol dehy 100.0 3.9E-41 8.5E-46 310.4 32.9 328 10-354 1-333 (334)
50 cd05279 Zn_ADH1 Liver alcohol 100.0 4.8E-41 1E-45 313.1 33.7 328 18-352 7-364 (365)
51 cd08245 CAD Cinnamyl alcohol d 100.0 1.8E-40 3.9E-45 305.5 33.0 323 19-352 7-330 (330)
52 cd08298 CAD2 Cinnamyl alcohol 100.0 3.1E-40 6.6E-45 303.8 33.9 314 22-352 15-329 (329)
53 cd08279 Zn_ADH_class_III Class 100.0 4.8E-40 1E-44 306.3 35.3 335 10-351 1-362 (363)
54 cd08256 Zn_ADH2 Alcohol dehydr 100.0 2.6E-40 5.7E-45 306.8 33.4 328 10-352 1-350 (350)
55 cd08286 FDH_like_ADH2 formalde 100.0 4.7E-40 1E-44 304.6 34.8 323 21-354 9-345 (345)
56 KOG0025 Zn2+-binding dehydroge 100.0 8.6E-41 1.9E-45 281.8 26.5 309 10-355 20-353 (354)
57 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 8.5E-40 1.8E-44 301.8 34.1 333 10-354 1-338 (338)
58 cd08282 PFDH_like Pseudomonas 100.0 1.3E-39 2.8E-44 304.6 35.5 328 19-354 7-375 (375)
59 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.4E-39 2.9E-44 300.5 34.8 320 21-354 9-337 (337)
60 cd08263 Zn_ADH10 Alcohol dehyd 100.0 1.1E-39 2.4E-44 304.4 34.0 337 10-353 1-367 (367)
61 cd08242 MDR_like Medium chain 100.0 9.3E-40 2E-44 299.3 32.9 315 11-354 2-319 (319)
62 cd08232 idonate-5-DH L-idonate 100.0 1.6E-39 3.5E-44 300.2 33.5 328 18-354 3-339 (339)
63 cd08295 double_bond_reductase_ 100.0 6.5E-40 1.4E-44 302.6 30.2 295 19-354 16-338 (338)
64 cd08259 Zn_ADH5 Alcohol dehydr 100.0 3.5E-39 7.7E-44 296.9 35.0 328 10-353 1-332 (332)
65 cd08264 Zn_ADH_like2 Alcohol d 100.0 1.2E-39 2.6E-44 299.4 31.7 321 10-350 1-324 (325)
66 PRK05396 tdh L-threonine 3-deh 100.0 2E-39 4.4E-44 299.8 32.8 328 11-355 2-341 (341)
67 cd08284 FDH_like_2 Glutathione 100.0 2.7E-39 5.8E-44 299.4 33.6 323 20-353 8-343 (344)
68 cd08287 FDH_like_ADH3 formalde 100.0 3.8E-39 8.3E-44 298.5 34.4 327 10-353 1-344 (345)
69 cd08235 iditol_2_DH_like L-idi 100.0 4E-39 8.7E-44 298.1 33.9 319 21-353 9-343 (343)
70 cd05285 sorbitol_DH Sorbitol d 100.0 3.1E-39 6.7E-44 298.8 32.3 321 19-352 5-341 (343)
71 cd08292 ETR_like_2 2-enoyl thi 100.0 2E-39 4.3E-44 297.7 30.8 304 10-353 1-324 (324)
72 PLN02702 L-idonate 5-dehydroge 100.0 9.1E-39 2E-43 297.9 35.0 321 20-353 25-363 (364)
73 cd08274 MDR9 Medium chain dehy 100.0 3.1E-39 6.7E-44 299.7 31.7 323 10-354 1-350 (350)
74 cd08265 Zn_ADH3 Alcohol dehydr 100.0 4.9E-39 1.1E-43 301.5 33.2 326 10-352 29-383 (384)
75 cd08262 Zn_ADH8 Alcohol dehydr 100.0 8.5E-39 1.8E-43 295.7 33.6 308 23-353 10-341 (341)
76 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.5E-38 3.2E-43 293.6 34.0 333 10-354 1-342 (342)
77 TIGR02825 B4_12hDH leukotriene 100.0 3.3E-39 7.1E-44 296.4 28.4 288 18-353 13-325 (325)
78 cd08236 sugar_DH NAD(P)-depend 100.0 1.7E-38 3.6E-43 294.0 33.2 326 10-352 1-343 (343)
79 TIGR03366 HpnZ_proposed putati 100.0 1E-39 2.3E-44 293.1 24.5 260 68-334 1-280 (280)
80 cd08293 PTGR2 Prostaglandin re 100.0 9.3E-39 2E-43 295.9 30.4 294 21-354 20-345 (345)
81 cd08294 leukotriene_B4_DH_like 100.0 2.3E-38 5E-43 291.3 29.7 297 10-354 3-329 (329)
82 TIGR00692 tdh L-threonine 3-de 100.0 1.3E-37 2.8E-42 287.6 32.7 322 18-354 5-340 (340)
83 TIGR02817 adh_fam_1 zinc-bindi 100.0 6.8E-38 1.5E-42 289.0 29.0 304 12-353 2-334 (336)
84 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.1E-37 4.5E-42 281.9 30.2 289 20-320 10-306 (306)
85 cd05281 TDH Threonine dehydrog 100.0 4.4E-37 9.6E-42 284.1 32.3 322 18-354 7-341 (341)
86 PRK10754 quinone oxidoreductas 100.0 3.8E-37 8.2E-42 283.0 29.1 306 9-353 1-326 (327)
87 cd08234 threonine_DH_like L-th 100.0 1.9E-36 4E-41 279.2 32.7 316 21-352 9-333 (334)
88 cd08290 ETR 2-enoyl thioester 100.0 5.7E-37 1.2E-41 283.5 28.7 307 10-354 1-341 (341)
89 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 1.7E-36 3.7E-41 278.3 31.6 312 10-354 1-325 (325)
90 cd08244 MDR_enoyl_red Possible 100.0 2.7E-36 5.8E-41 276.9 32.3 307 10-354 1-324 (324)
91 PTZ00354 alcohol dehydrogenase 100.0 2.1E-36 4.7E-41 278.6 31.8 310 9-357 1-331 (334)
92 cd08270 MDR4 Medium chain dehy 100.0 2.4E-36 5.3E-41 274.8 31.3 295 11-354 2-305 (305)
93 cd08276 MDR7 Medium chain dehy 100.0 8E-36 1.7E-40 275.0 33.7 327 10-354 1-336 (336)
94 TIGR02823 oxido_YhdH putative 100.0 5.2E-36 1.1E-40 275.0 32.2 310 12-354 2-323 (323)
95 cd08250 Mgc45594_like Mgc45594 100.0 5.5E-36 1.2E-40 275.5 30.8 301 10-353 2-329 (329)
96 KOG1198 Zinc-binding oxidoredu 100.0 2E-36 4.4E-41 275.0 26.4 306 11-355 7-346 (347)
97 cd05282 ETR_like 2-enoyl thioe 100.0 7.6E-36 1.6E-40 273.8 29.6 292 23-353 13-323 (323)
98 cd08289 MDR_yhfp_like Yhfp put 100.0 7.9E-36 1.7E-40 274.1 29.3 312 10-354 1-326 (326)
99 cd08249 enoyl_reductase_like e 100.0 9.7E-36 2.1E-40 274.9 27.9 313 10-354 1-339 (339)
100 cd08243 quinone_oxidoreductase 100.0 3.5E-35 7.6E-40 268.8 30.0 308 10-352 1-319 (320)
101 cd08252 AL_MDR Arginate lyase 100.0 4.2E-35 9.2E-40 270.4 30.0 307 10-353 1-336 (336)
102 cd08269 Zn_ADH9 Alcohol dehydr 100.0 9.1E-35 2E-39 265.3 30.5 291 20-352 3-311 (312)
103 cd08288 MDR_yhdh Yhdh putative 100.0 3.3E-34 7.1E-39 263.1 32.1 310 10-354 1-324 (324)
104 cd08248 RTN4I1 Human Reticulon 100.0 2.7E-34 5.9E-39 266.5 29.4 309 10-353 1-350 (350)
105 cd08253 zeta_crystallin Zeta-c 100.0 7E-34 1.5E-38 260.3 30.3 311 10-354 1-325 (325)
106 COG2130 Putative NADP-dependen 100.0 3.2E-34 7E-39 244.6 25.2 294 21-356 24-340 (340)
107 cd05276 p53_inducible_oxidored 100.0 1.2E-33 2.5E-38 258.5 30.7 304 10-352 1-323 (323)
108 cd08273 MDR8 Medium chain dehy 100.0 2E-33 4.3E-38 258.7 29.8 301 11-352 2-330 (331)
109 cd08272 MDR6 Medium chain dehy 100.0 3.8E-33 8.3E-38 255.8 30.7 307 10-354 1-326 (326)
110 cd05286 QOR2 Quinone oxidoredu 100.0 6.2E-33 1.3E-37 253.4 31.8 297 18-354 8-320 (320)
111 cd05288 PGDH Prostaglandin deh 100.0 3.2E-33 6.8E-38 257.1 29.2 290 20-352 16-329 (329)
112 cd08247 AST1_like AST1 is a cy 100.0 7.5E-33 1.6E-37 257.1 28.6 302 19-354 8-352 (352)
113 cd05188 MDR Medium chain reduc 100.0 5.7E-33 1.2E-37 248.0 26.8 265 38-317 1-271 (271)
114 cd05289 MDR_like_2 alcohol deh 100.0 8.2E-33 1.8E-37 251.5 27.8 302 10-352 1-309 (309)
115 cd08271 MDR5 Medium chain dehy 100.0 1.6E-32 3.4E-37 251.8 29.4 296 22-354 13-325 (325)
116 TIGR02824 quinone_pig3 putativ 100.0 6.3E-32 1.4E-36 247.5 31.4 306 10-354 1-325 (325)
117 cd08267 MDR1 Medium chain dehy 100.0 2E-32 4.4E-37 250.4 27.1 301 15-352 3-319 (319)
118 cd08268 MDR2 Medium chain dehy 100.0 9.8E-32 2.1E-36 246.5 31.2 310 11-354 2-328 (328)
119 cd08241 QOR1 Quinone oxidoredu 100.0 1.7E-31 3.6E-36 244.4 30.2 304 10-353 1-323 (323)
120 cd08251 polyketide_synthase po 100.0 2.3E-31 5E-36 241.4 27.6 283 31-352 2-303 (303)
121 cd08275 MDR3 Medium chain dehy 100.0 2.5E-30 5.4E-35 238.4 30.8 296 19-354 9-337 (337)
122 cd05195 enoyl_red enoyl reduct 100.0 4.4E-30 9.6E-35 231.3 25.8 273 37-352 1-293 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 8.7E-30 1.9E-34 229.1 24.6 268 41-352 2-288 (288)
124 cd08255 2-desacetyl-2-hydroxye 100.0 4.7E-28 1E-32 217.4 22.7 245 62-352 17-277 (277)
125 KOG1202 Animal-type fatty acid 100.0 6.2E-28 1.3E-32 234.2 18.4 292 19-358 1424-1745(2376)
126 KOG1196 Predicted NAD-dependen 100.0 6.8E-26 1.5E-30 193.1 24.1 291 23-356 21-342 (343)
127 PF08240 ADH_N: Alcohol dehydr 99.9 8E-24 1.7E-28 162.1 9.7 108 36-151 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 4.9E-17 1.1E-21 128.8 11.8 124 195-319 1-130 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 1.2E-13 2.5E-18 128.1 12.8 175 171-356 189-378 (413)
130 PF13602 ADH_zinc_N_2: Zinc-bi 99.5 5.4E-14 1.2E-18 110.8 4.6 117 228-352 1-127 (127)
131 PRK09424 pntA NAD(P) transhydr 99.4 7E-12 1.5E-16 119.2 16.7 141 183-324 163-334 (509)
132 TIGR00561 pntA NAD(P) transhyd 98.7 2.1E-07 4.6E-12 88.6 12.2 120 184-304 163-313 (511)
133 PRK11873 arsM arsenite S-adeno 98.7 3.6E-07 7.8E-12 81.7 12.3 166 182-351 75-258 (272)
134 PRK05476 S-adenosyl-L-homocyst 98.6 3.8E-07 8.3E-12 85.3 12.2 109 168-285 196-305 (425)
135 PRK08306 dipicolinate synthase 98.6 1.4E-06 3E-11 78.6 14.0 111 184-301 151-261 (296)
136 PLN02494 adenosylhomocysteinas 98.4 3.1E-06 6.6E-11 79.5 12.6 103 171-282 241-344 (477)
137 TIGR00518 alaDH alanine dehydr 98.4 3.2E-06 6.9E-11 78.6 12.4 98 185-282 167-270 (370)
138 TIGR00936 ahcY adenosylhomocys 98.4 2.2E-06 4.7E-11 79.8 11.1 91 184-282 194-285 (406)
139 PRK12771 putative glutamate sy 98.2 6.9E-07 1.5E-11 88.2 3.0 118 183-302 135-275 (564)
140 TIGR01035 hemA glutamyl-tRNA r 98.2 3E-07 6.5E-12 86.9 -0.1 160 68-261 89-253 (417)
141 TIGR02853 spore_dpaA dipicolin 98.2 6E-05 1.3E-09 67.6 14.1 110 184-300 150-259 (287)
142 PTZ00075 Adenosylhomocysteinas 98.1 1.7E-05 3.8E-10 74.7 10.3 91 184-282 253-344 (476)
143 PRK00517 prmA ribosomal protei 98.1 2.5E-05 5.5E-10 68.8 10.5 134 137-282 79-216 (250)
144 PRK00045 hemA glutamyl-tRNA re 98.1 2.4E-07 5.3E-12 87.8 -2.7 163 68-261 91-255 (423)
145 PRK08324 short chain dehydroge 98.1 3.4E-05 7.5E-10 77.9 12.5 135 135-282 385-560 (681)
146 cd05213 NAD_bind_Glutamyl_tRNA 98.1 9.1E-06 2E-10 73.9 7.6 111 146-261 139-251 (311)
147 COG4221 Short-chain alcohol de 98.1 6.8E-05 1.5E-09 64.0 12.0 75 184-258 5-91 (246)
148 PF01488 Shikimate_DH: Shikima 98.0 2.4E-05 5.2E-10 62.0 7.1 95 184-281 11-111 (135)
149 PF00670 AdoHcyase_NAD: S-aden 97.9 0.00023 5E-09 57.3 11.5 95 184-286 22-117 (162)
150 COG0300 DltE Short-chain dehyd 97.9 0.00018 3.9E-09 63.0 11.5 75 184-258 5-94 (265)
151 COG2518 Pcm Protein-L-isoaspar 97.7 0.00046 1E-08 57.9 11.1 94 182-278 70-168 (209)
152 COG0686 Ald Alanine dehydrogen 97.7 0.00029 6.2E-09 62.0 9.4 96 186-281 169-270 (371)
153 PF12847 Methyltransf_18: Meth 97.7 0.00057 1.2E-08 51.9 9.7 94 184-278 1-110 (112)
154 PRK05993 short chain dehydroge 97.6 0.0011 2.5E-08 59.2 13.0 74 184-258 3-86 (277)
155 COG1748 LYS9 Saccharopine dehy 97.6 0.00055 1.2E-08 63.3 10.8 97 186-282 2-102 (389)
156 PRK00377 cbiT cobalt-precorrin 97.6 0.0011 2.5E-08 56.1 11.7 95 182-277 38-143 (198)
157 COG3967 DltE Short-chain dehyd 97.6 0.00038 8.3E-09 57.6 8.2 74 184-257 4-87 (245)
158 PRK14175 bifunctional 5,10-met 97.6 0.00071 1.5E-08 60.1 10.1 97 161-282 136-233 (286)
159 PRK05693 short chain dehydroge 97.5 0.002 4.4E-08 57.5 13.3 72 186-258 2-82 (274)
160 PRK12742 oxidoreductase; Provi 97.5 0.0015 3.3E-08 56.7 12.2 99 184-282 5-134 (237)
161 PF02826 2-Hacid_dh_C: D-isome 97.5 0.00035 7.7E-09 58.1 7.4 120 184-335 35-160 (178)
162 PLN03209 translocon at the inn 97.5 0.0014 3E-08 63.7 12.2 101 182-282 77-210 (576)
163 KOG1205 Predicted dehydrogenas 97.5 0.0011 2.4E-08 58.6 10.4 106 184-289 11-159 (282)
164 PRK05786 fabG 3-ketoacyl-(acyl 97.5 0.0016 3.6E-08 56.6 11.6 99 184-282 4-138 (238)
165 KOG1209 1-Acyl dihydroxyaceton 97.5 0.0015 3.2E-08 54.4 10.3 105 184-288 6-147 (289)
166 PRK06182 short chain dehydroge 97.5 0.0021 4.5E-08 57.4 12.1 74 184-258 2-84 (273)
167 cd01080 NAD_bind_m-THF_DH_Cycl 97.4 0.0014 3.1E-08 53.7 10.0 98 160-282 21-119 (168)
168 COG2242 CobL Precorrin-6B meth 97.4 0.0031 6.7E-08 51.8 11.7 98 182-281 32-137 (187)
169 PF13460 NAD_binding_10: NADH( 97.4 0.001 2.2E-08 55.4 8.8 91 188-281 1-99 (183)
170 PRK08265 short chain dehydroge 97.3 0.0032 6.9E-08 55.8 11.9 99 184-282 5-139 (261)
171 PRK08339 short chain dehydroge 97.3 0.0056 1.2E-07 54.3 13.3 99 184-282 7-146 (263)
172 PF11017 DUF2855: Protein of u 97.3 0.0066 1.4E-07 54.5 13.4 113 166-282 117-234 (314)
173 PRK07576 short chain dehydroge 97.3 0.004 8.8E-08 55.2 11.9 74 184-257 8-95 (264)
174 PRK06500 short chain dehydroge 97.3 0.0038 8.3E-08 54.6 11.6 75 184-258 5-90 (249)
175 PRK07109 short chain dehydroge 97.3 0.0065 1.4E-07 56.0 13.5 99 184-282 7-146 (334)
176 PRK06139 short chain dehydroge 97.3 0.0037 7.9E-08 57.5 11.6 75 184-258 6-94 (330)
177 cd01065 NAD_bind_Shikimate_DH 97.3 0.0025 5.4E-08 51.6 9.5 96 184-282 18-119 (155)
178 TIGR01809 Shik-DH-AROM shikima 97.2 0.0017 3.6E-08 58.3 8.7 76 184-259 124-201 (282)
179 PRK06484 short chain dehydroge 97.2 0.0062 1.3E-07 59.7 13.3 99 184-282 268-403 (520)
180 cd01078 NAD_bind_H4MPT_DH NADP 97.2 0.0031 6.7E-08 53.2 9.7 77 184-260 27-109 (194)
181 TIGR01318 gltD_gamma_fam gluta 97.2 0.00084 1.8E-08 64.8 6.8 75 184-259 140-237 (467)
182 COG0169 AroE Shikimate 5-dehyd 97.2 0.0017 3.7E-08 57.7 8.0 71 184-258 125-200 (283)
183 PF01262 AlaDh_PNT_C: Alanine 97.2 0.0013 2.9E-08 54.1 6.8 96 184-280 19-140 (168)
184 PRK00258 aroE shikimate 5-dehy 97.2 0.0026 5.6E-08 57.0 9.1 95 184-280 122-222 (278)
185 PRK05872 short chain dehydroge 97.1 0.0032 7E-08 56.9 9.8 75 184-258 8-95 (296)
186 PRK08261 fabG 3-ketoacyl-(acyl 97.1 0.0069 1.5E-07 58.3 12.7 75 184-258 209-294 (450)
187 TIGR00406 prmA ribosomal prote 97.1 0.0065 1.4E-07 54.7 11.5 96 183-281 158-261 (288)
188 PRK07825 short chain dehydroge 97.1 0.01 2.2E-07 52.8 12.8 75 184-258 4-88 (273)
189 PRK07060 short chain dehydroge 97.1 0.0041 9E-08 54.3 10.1 75 184-258 8-87 (245)
190 PRK06196 oxidoreductase; Provi 97.1 0.0093 2E-07 54.4 12.7 75 184-258 25-109 (315)
191 PRK07231 fabG 3-ketoacyl-(acyl 97.1 0.01 2.2E-07 51.9 12.6 75 184-258 4-91 (251)
192 PRK14192 bifunctional 5,10-met 97.1 0.0036 7.9E-08 55.9 9.5 95 163-282 139-234 (283)
193 PRK06484 short chain dehydroge 97.1 0.0099 2.2E-07 58.3 13.6 75 184-258 4-89 (520)
194 TIGR01470 cysG_Nterm siroheme 97.1 0.006 1.3E-07 51.9 10.3 95 184-282 8-103 (205)
195 PF13241 NAD_binding_7: Putati 97.1 0.0023 5E-08 48.0 6.8 89 184-282 6-94 (103)
196 PF02353 CMAS: Mycolic acid cy 97.1 0.0045 9.8E-08 55.1 9.7 92 182-277 60-164 (273)
197 PRK06505 enoyl-(acyl carrier p 97.1 0.014 3E-07 52.0 13.0 99 184-282 6-148 (271)
198 PF01135 PCMT: Protein-L-isoas 97.1 0.0022 4.8E-08 54.6 7.4 96 182-278 70-171 (209)
199 PRK12939 short chain dehydroge 97.1 0.013 2.9E-07 51.1 12.8 75 184-258 6-94 (250)
200 PRK13943 protein-L-isoaspartat 97.1 0.0064 1.4E-07 55.4 10.8 96 182-278 78-179 (322)
201 PRK12549 shikimate 5-dehydroge 97.0 0.0029 6.2E-08 56.8 8.3 71 184-257 126-201 (284)
202 PRK06057 short chain dehydroge 97.0 0.0062 1.3E-07 53.7 10.4 75 184-258 6-89 (255)
203 PRK03369 murD UDP-N-acetylmura 97.0 0.0063 1.4E-07 59.1 11.2 72 184-260 11-82 (488)
204 cd01075 NAD_bind_Leu_Phe_Val_D 97.0 0.012 2.6E-07 49.8 11.6 81 184-270 27-107 (200)
205 PRK11705 cyclopropane fatty ac 97.0 0.0043 9.3E-08 58.1 9.6 111 163-279 148-267 (383)
206 PF03435 Saccharop_dh: Sacchar 97.0 0.0045 9.7E-08 58.3 9.8 92 188-279 1-98 (386)
207 TIGR02469 CbiT precorrin-6Y C5 97.0 0.012 2.7E-07 45.2 10.8 96 183-279 18-122 (124)
208 PRK08267 short chain dehydroge 97.0 0.012 2.7E-07 51.9 12.1 73 186-258 2-87 (260)
209 PRK12548 shikimate 5-dehydroge 97.0 0.0047 1E-07 55.6 9.4 75 184-258 125-209 (289)
210 PRK07326 short chain dehydroge 97.0 0.0086 1.9E-07 52.0 10.7 75 184-258 5-92 (237)
211 PRK06719 precorrin-2 dehydroge 97.0 0.015 3.2E-07 47.2 11.0 88 184-278 12-99 (157)
212 PRK06200 2,3-dihydroxy-2,3-dih 97.0 0.0049 1.1E-07 54.6 9.0 75 184-258 5-90 (263)
213 PRK07832 short chain dehydroge 96.9 0.024 5.1E-07 50.5 13.4 73 186-258 1-88 (272)
214 PRK14189 bifunctional 5,10-met 96.9 0.0052 1.1E-07 54.5 8.8 97 161-282 136-233 (285)
215 PRK13942 protein-L-isoaspartat 96.9 0.01 2.2E-07 50.8 10.5 95 182-278 74-175 (212)
216 cd05212 NAD_bind_m-THF_DH_Cycl 96.9 0.0098 2.1E-07 47.1 9.5 97 161-282 6-103 (140)
217 PRK08618 ornithine cyclodeamin 96.9 0.0066 1.4E-07 55.7 9.8 93 184-282 126-224 (325)
218 PRK07502 cyclohexadienyl dehyd 96.9 0.0083 1.8E-07 54.6 10.4 91 186-281 7-102 (307)
219 PRK10792 bifunctional 5,10-met 96.9 0.006 1.3E-07 54.1 9.0 97 161-282 137-234 (285)
220 PRK08415 enoyl-(acyl carrier p 96.9 0.022 4.7E-07 50.9 12.7 99 184-282 4-146 (274)
221 PRK09186 flagellin modificatio 96.9 0.016 3.6E-07 50.9 11.8 74 184-257 3-92 (256)
222 PRK07806 short chain dehydroge 96.9 0.019 4.1E-07 50.2 12.1 97 184-280 5-135 (248)
223 PRK06718 precorrin-2 dehydroge 96.9 0.012 2.5E-07 50.0 10.2 93 184-281 9-102 (202)
224 PRK14194 bifunctional 5,10-met 96.9 0.0063 1.4E-07 54.4 8.8 97 161-282 137-234 (301)
225 PRK12550 shikimate 5-dehydroge 96.9 0.0064 1.4E-07 54.1 8.9 78 170-258 110-188 (272)
226 COG2226 UbiE Methylase involve 96.9 0.015 3.3E-07 50.3 10.9 99 183-282 50-159 (238)
227 CHL00194 ycf39 Ycf39; Provisio 96.9 0.013 2.9E-07 53.5 11.4 94 187-281 2-111 (317)
228 TIGR03325 BphB_TodD cis-2,3-di 96.9 0.009 2E-07 52.9 10.0 75 184-258 4-89 (262)
229 PRK08263 short chain dehydroge 96.9 0.021 4.6E-07 50.9 12.3 74 185-258 3-87 (275)
230 PRK10538 malonic semialdehyde 96.8 0.025 5.4E-07 49.5 12.6 72 187-258 2-84 (248)
231 PRK12829 short chain dehydroge 96.8 0.0085 1.8E-07 52.9 9.7 76 184-259 10-97 (264)
232 PRK04457 spermidine synthase; 96.8 0.027 5.9E-07 49.9 12.6 94 184-278 66-176 (262)
233 PRK12809 putative oxidoreducta 96.8 0.0032 6.9E-08 63.3 7.3 75 184-259 309-406 (639)
234 PRK14027 quinate/shikimate deh 96.8 0.0074 1.6E-07 54.0 8.9 74 184-258 126-204 (283)
235 PRK06603 enoyl-(acyl carrier p 96.8 0.025 5.4E-07 50.0 12.4 75 184-258 7-96 (260)
236 TIGR00507 aroE shikimate 5-deh 96.8 0.0089 1.9E-07 53.3 9.4 94 184-282 116-217 (270)
237 PRK13940 glutamyl-tRNA reducta 96.8 0.0071 1.5E-07 57.1 9.1 75 184-261 180-255 (414)
238 PRK12367 short chain dehydroge 96.8 0.0072 1.6E-07 53.1 8.7 73 184-258 13-89 (245)
239 PRK06079 enoyl-(acyl carrier p 96.8 0.028 6E-07 49.5 12.4 98 184-282 6-146 (252)
240 PRK07533 enoyl-(acyl carrier p 96.8 0.042 9E-07 48.5 13.4 99 184-282 9-151 (258)
241 PF02882 THF_DHG_CYH_C: Tetrah 96.8 0.0058 1.2E-07 49.5 7.1 98 160-282 13-111 (160)
242 PRK12749 quinate/shikimate deh 96.8 0.012 2.6E-07 52.8 9.9 75 184-258 123-206 (288)
243 PRK09072 short chain dehydroge 96.8 0.026 5.7E-07 49.9 12.1 75 184-258 4-90 (263)
244 PRK12429 3-hydroxybutyrate deh 96.8 0.035 7.5E-07 48.8 12.8 75 184-258 3-91 (258)
245 PRK04148 hypothetical protein; 96.7 0.026 5.6E-07 44.1 10.3 87 184-273 16-102 (134)
246 PRK07831 short chain dehydroge 96.7 0.015 3.2E-07 51.5 10.3 75 184-258 16-107 (262)
247 PRK07814 short chain dehydroge 96.7 0.011 2.4E-07 52.4 9.4 75 184-258 9-97 (263)
248 PRK05866 short chain dehydroge 96.7 0.0067 1.4E-07 54.8 8.1 75 184-258 39-127 (293)
249 PRK07062 short chain dehydroge 96.7 0.011 2.3E-07 52.5 9.3 75 184-258 7-97 (265)
250 PRK10258 biotin biosynthesis p 96.7 0.035 7.6E-07 48.9 12.5 96 184-282 42-143 (251)
251 PRK07063 short chain dehydroge 96.7 0.01 2.2E-07 52.4 9.1 75 184-258 6-96 (260)
252 PLN00203 glutamyl-tRNA reducta 96.7 0.017 3.8E-07 56.0 11.1 98 184-282 265-372 (519)
253 PRK08159 enoyl-(acyl carrier p 96.7 0.04 8.7E-07 49.1 12.8 99 184-282 9-151 (272)
254 PRK14188 bifunctional 5,10-met 96.7 0.011 2.3E-07 53.1 8.8 96 161-282 136-233 (296)
255 PRK06180 short chain dehydroge 96.7 0.015 3.3E-07 51.9 10.0 75 184-258 3-88 (277)
256 PF10727 Rossmann-like: Rossma 96.7 0.0076 1.6E-07 46.9 6.9 82 184-272 9-91 (127)
257 PRK07453 protochlorophyllide o 96.7 0.013 2.9E-07 53.6 9.8 74 184-257 5-92 (322)
258 PRK14191 bifunctional 5,10-met 96.7 0.016 3.4E-07 51.5 9.7 97 161-282 135-232 (285)
259 PRK05854 short chain dehydroge 96.7 0.011 2.4E-07 54.0 9.1 75 184-258 13-103 (313)
260 PRK13944 protein-L-isoaspartat 96.7 0.027 5.9E-07 47.9 10.9 95 182-278 70-172 (205)
261 PRK06101 short chain dehydroge 96.6 0.038 8.2E-07 48.2 12.2 72 186-257 2-80 (240)
262 PRK07574 formate dehydrogenase 96.6 0.026 5.7E-07 52.7 11.6 91 184-281 191-286 (385)
263 PRK05867 short chain dehydroge 96.6 0.012 2.6E-07 51.7 9.0 75 184-258 8-96 (253)
264 PRK13394 3-hydroxybutyrate deh 96.6 0.047 1E-06 48.1 12.9 75 184-258 6-94 (262)
265 PRK07523 gluconate 5-dehydroge 96.6 0.014 3.1E-07 51.3 9.5 75 184-258 9-97 (255)
266 TIGR00080 pimt protein-L-isoas 96.6 0.023 5E-07 48.8 10.3 95 182-278 75-176 (215)
267 PRK06398 aldose dehydrogenase; 96.6 0.013 2.8E-07 51.8 9.1 70 184-258 5-82 (258)
268 PRK06949 short chain dehydroge 96.6 0.014 3E-07 51.4 9.2 75 184-258 8-96 (258)
269 PRK08217 fabG 3-ketoacyl-(acyl 96.6 0.019 4E-07 50.3 10.0 75 184-258 4-92 (253)
270 TIGR02992 ectoine_eutC ectoine 96.6 0.015 3.3E-07 53.3 9.7 94 184-282 128-227 (326)
271 PRK12823 benD 1,6-dihydroxycyc 96.6 0.046 9.9E-07 48.2 12.5 75 184-258 7-94 (260)
272 PF03807 F420_oxidored: NADP o 96.6 0.022 4.9E-07 41.8 8.9 86 187-278 1-93 (96)
273 PRK08017 oxidoreductase; Provi 96.6 0.015 3.4E-07 51.0 9.4 72 186-258 3-84 (256)
274 PRK09291 short chain dehydroge 96.6 0.015 3.1E-07 51.2 9.1 74 185-258 2-83 (257)
275 PRK06194 hypothetical protein; 96.6 0.017 3.8E-07 51.7 9.8 75 184-258 5-93 (287)
276 COG2910 Putative NADH-flavin r 96.6 0.016 3.4E-07 47.4 8.2 91 187-281 2-106 (211)
277 COG0373 HemA Glutamyl-tRNA red 96.6 0.025 5.4E-07 52.8 10.7 95 184-282 177-277 (414)
278 PRK08594 enoyl-(acyl carrier p 96.6 0.054 1.2E-06 47.8 12.6 99 184-282 6-150 (257)
279 PRK05653 fabG 3-ketoacyl-(acyl 96.6 0.056 1.2E-06 46.9 12.7 75 184-258 4-92 (246)
280 PRK05717 oxidoreductase; Valid 96.6 0.021 4.6E-07 50.2 10.0 75 184-258 9-94 (255)
281 PRK12481 2-deoxy-D-gluconate 3 96.5 0.034 7.4E-07 48.9 11.2 74 184-258 7-93 (251)
282 PRK07478 short chain dehydroge 96.5 0.015 3.3E-07 51.0 9.0 75 184-258 5-93 (254)
283 PRK14176 bifunctional 5,10-met 96.5 0.017 3.6E-07 51.3 9.0 97 161-282 142-239 (287)
284 PRK06841 short chain dehydroge 96.5 0.02 4.2E-07 50.4 9.6 74 184-258 14-99 (255)
285 PRK06940 short chain dehydroge 96.5 0.04 8.6E-07 49.2 11.6 96 185-281 2-127 (275)
286 cd05311 NAD_bind_2_malic_enz N 96.5 0.025 5.4E-07 48.9 9.9 101 171-279 13-128 (226)
287 COG1648 CysG Siroheme synthase 96.5 0.076 1.6E-06 45.2 12.5 118 184-305 11-130 (210)
288 PRK07677 short chain dehydroge 96.5 0.016 3.4E-07 50.9 8.9 74 185-258 1-88 (252)
289 PRK08177 short chain dehydroge 96.5 0.015 3.2E-07 50.2 8.5 72 186-258 2-81 (225)
290 PRK06128 oxidoreductase; Provi 96.5 0.035 7.5E-07 50.3 11.2 99 184-282 54-194 (300)
291 PRK07424 bifunctional sterol d 96.5 0.02 4.3E-07 54.0 9.8 75 184-258 177-255 (406)
292 PRK09242 tropinone reductase; 96.5 0.019 4.1E-07 50.6 9.2 75 184-258 8-98 (257)
293 PRK13243 glyoxylate reductase; 96.5 0.03 6.4E-07 51.5 10.7 89 184-281 149-242 (333)
294 PRK07024 short chain dehydroge 96.5 0.027 5.8E-07 49.7 10.2 74 185-258 2-88 (257)
295 PRK05876 short chain dehydroge 96.5 0.017 3.8E-07 51.5 9.0 75 184-258 5-93 (275)
296 PRK07890 short chain dehydroge 96.4 0.017 3.6E-07 50.9 8.7 75 184-258 4-92 (258)
297 PRK14178 bifunctional 5,10-met 96.4 0.023 5.1E-07 50.3 9.3 96 161-281 130-226 (279)
298 PRK07370 enoyl-(acyl carrier p 96.4 0.061 1.3E-06 47.5 12.2 99 184-282 5-150 (258)
299 PRK05884 short chain dehydroge 96.4 0.023 5.1E-07 49.0 9.3 71 187-257 2-78 (223)
300 PRK07984 enoyl-(acyl carrier p 96.4 0.081 1.8E-06 46.9 13.0 74 184-257 5-93 (262)
301 PLN03139 formate dehydrogenase 96.4 0.024 5.1E-07 53.0 9.8 91 184-281 198-293 (386)
302 PRK12828 short chain dehydroge 96.4 0.02 4.3E-07 49.6 8.8 75 184-258 6-92 (239)
303 PRK08862 short chain dehydroge 96.4 0.029 6.3E-07 48.6 9.7 74 184-257 4-92 (227)
304 COG2227 UbiG 2-polyprenyl-3-me 96.4 0.028 6.2E-07 48.1 9.2 91 184-278 59-160 (243)
305 PLN02253 xanthoxin dehydrogena 96.4 0.028 6.1E-07 50.2 9.9 75 184-258 17-104 (280)
306 PRK06141 ornithine cyclodeamin 96.4 0.023 5E-07 51.8 9.4 95 184-282 124-222 (314)
307 PRK08643 acetoin reductase; Va 96.4 0.023 4.9E-07 50.0 9.1 74 185-258 2-89 (256)
308 PRK07340 ornithine cyclodeamin 96.4 0.026 5.7E-07 51.2 9.5 101 184-290 124-229 (304)
309 PRK14177 bifunctional 5,10-met 96.4 0.024 5.2E-07 50.3 8.9 97 161-282 137-234 (284)
310 PRK06125 short chain dehydroge 96.4 0.023 5.1E-07 50.1 9.1 75 184-258 6-91 (259)
311 PRK14180 bifunctional 5,10-met 96.4 0.023 5E-07 50.4 8.8 97 161-282 136-233 (282)
312 PRK14179 bifunctional 5,10-met 96.4 0.019 4.1E-07 51.0 8.3 96 162-282 137-233 (284)
313 PRK07067 sorbitol dehydrogenas 96.4 0.024 5.1E-07 50.0 9.1 75 184-258 5-90 (257)
314 PRK06914 short chain dehydroge 96.3 0.08 1.7E-06 47.2 12.5 75 184-258 2-91 (280)
315 PRK12747 short chain dehydroge 96.3 0.055 1.2E-06 47.5 11.2 99 184-282 3-147 (252)
316 COG2264 PrmA Ribosomal protein 96.3 0.024 5.2E-07 50.6 8.7 130 145-282 129-266 (300)
317 PRK14172 bifunctional 5,10-met 96.3 0.026 5.5E-07 50.0 8.7 96 162-282 137-233 (278)
318 TIGR03840 TMPT_Se_Te thiopurin 96.3 0.041 8.8E-07 47.1 9.8 96 184-281 34-154 (213)
319 PLN00141 Tic62-NAD(P)-related 96.3 0.066 1.4E-06 47.1 11.6 98 184-281 16-133 (251)
320 COG2230 Cfa Cyclopropane fatty 96.3 0.021 4.5E-07 50.6 8.1 96 182-281 70-178 (283)
321 KOG1210 Predicted 3-ketosphing 96.3 0.032 6.9E-07 49.6 9.2 75 184-258 32-122 (331)
322 PRK07985 oxidoreductase; Provi 96.3 0.052 1.1E-06 49.0 11.1 99 184-282 48-188 (294)
323 PRK05562 precorrin-2 dehydroge 96.3 0.061 1.3E-06 46.1 10.7 93 184-280 24-117 (223)
324 PRK14190 bifunctional 5,10-met 96.3 0.035 7.6E-07 49.3 9.5 97 161-282 136-233 (284)
325 PRK07035 short chain dehydroge 96.3 0.029 6.4E-07 49.2 9.2 75 184-258 7-95 (252)
326 PF01408 GFO_IDH_MocA: Oxidore 96.3 0.087 1.9E-06 40.3 10.8 87 187-278 2-91 (120)
327 PRK08317 hypothetical protein; 96.2 0.042 9.2E-07 47.6 10.0 98 182-280 17-125 (241)
328 PLN02928 oxidoreductase family 96.2 0.02 4.3E-07 52.9 8.2 95 184-280 158-263 (347)
329 PRK08589 short chain dehydroge 96.2 0.029 6.4E-07 49.9 9.1 74 184-258 5-92 (272)
330 PRK12769 putative oxidoreducta 96.2 0.014 3E-07 58.9 7.8 75 184-259 326-423 (654)
331 PRK08213 gluconate 5-dehydroge 96.2 0.033 7.2E-07 49.1 9.4 75 184-258 11-99 (259)
332 PRK06483 dihydromonapterin red 96.2 0.034 7.5E-07 48.2 9.4 74 185-258 2-84 (236)
333 COG2423 Predicted ornithine cy 96.2 0.03 6.5E-07 51.0 9.1 98 184-282 129-228 (330)
334 PRK07774 short chain dehydroge 96.2 0.029 6.2E-07 49.1 8.9 75 184-258 5-93 (250)
335 PRK06482 short chain dehydroge 96.2 0.03 6.4E-07 49.9 9.1 73 186-258 3-86 (276)
336 PLN03075 nicotianamine synthas 96.2 0.031 6.7E-07 50.0 8.8 96 184-279 123-233 (296)
337 PRK06197 short chain dehydroge 96.2 0.025 5.4E-07 51.4 8.5 75 184-258 15-105 (306)
338 PRK06172 short chain dehydroge 96.2 0.031 6.8E-07 49.0 9.0 75 184-258 6-94 (253)
339 PRK14967 putative methyltransf 96.2 0.1 2.2E-06 45.0 11.9 94 182-278 34-158 (223)
340 PRK08340 glucose-1-dehydrogena 96.2 0.034 7.4E-07 49.0 9.2 72 187-258 2-86 (259)
341 TIGR01832 kduD 2-deoxy-D-gluco 96.2 0.029 6.3E-07 49.0 8.6 74 184-258 4-90 (248)
342 PF02254 TrkA_N: TrkA-N domain 96.2 0.073 1.6E-06 40.6 9.8 89 188-278 1-95 (116)
343 TIGR02632 RhaD_aldol-ADH rhamn 96.2 0.029 6.4E-07 56.8 9.6 110 136-258 378-503 (676)
344 COG1052 LdhA Lactate dehydroge 96.2 0.061 1.3E-06 49.1 10.7 89 184-281 145-238 (324)
345 PRK06701 short chain dehydroge 96.2 0.074 1.6E-06 47.9 11.4 99 184-282 45-184 (290)
346 PF02670 DXP_reductoisom: 1-de 96.1 0.18 3.8E-06 39.2 11.7 91 188-278 1-120 (129)
347 PRK05447 1-deoxy-D-xylulose 5- 96.1 0.081 1.7E-06 49.0 11.4 93 186-278 2-121 (385)
348 PRK08291 ectoine utilization p 96.1 0.047 1E-06 50.2 10.1 94 184-282 131-230 (330)
349 PRK06138 short chain dehydroge 96.1 0.034 7.3E-07 48.7 8.8 75 184-258 4-91 (252)
350 PRK00811 spermidine synthase; 96.1 0.078 1.7E-06 47.6 11.2 95 184-279 76-191 (283)
351 PRK08085 gluconate 5-dehydroge 96.1 0.04 8.7E-07 48.4 9.3 75 184-258 8-96 (254)
352 PLN02366 spermidine synthase 96.1 0.076 1.7E-06 48.1 11.1 95 184-279 91-206 (308)
353 PRK06198 short chain dehydroge 96.1 0.039 8.5E-07 48.6 9.2 75 184-258 5-94 (260)
354 PRK11207 tellurite resistance 96.1 0.055 1.2E-06 45.8 9.6 92 184-278 30-133 (197)
355 PRK07066 3-hydroxybutyryl-CoA 96.1 0.1 2.2E-06 47.5 11.9 91 185-278 7-117 (321)
356 PF03446 NAD_binding_2: NAD bi 96.1 0.025 5.4E-07 46.2 7.3 90 186-282 2-97 (163)
357 PRK05875 short chain dehydroge 96.1 0.036 7.8E-07 49.4 9.0 75 184-258 6-96 (276)
358 PRK07074 short chain dehydroge 96.1 0.053 1.2E-06 47.7 10.0 74 185-258 2-87 (257)
359 PRK12743 oxidoreductase; Provi 96.1 0.096 2.1E-06 46.1 11.6 74 185-258 2-90 (256)
360 PRK03562 glutathione-regulated 96.1 0.04 8.6E-07 55.2 10.0 76 185-261 400-477 (621)
361 KOG0725 Reductases with broad 96.1 0.055 1.2E-06 48.2 9.9 75 184-258 7-99 (270)
362 PRK12936 3-ketoacyl-(acyl-carr 96.1 0.041 8.9E-07 47.9 9.2 75 184-258 5-90 (245)
363 PRK10669 putative cation:proto 96.1 0.043 9.4E-07 54.3 10.2 73 186-259 418-492 (558)
364 PTZ00098 phosphoethanolamine N 96.1 0.03 6.4E-07 49.7 8.1 98 182-280 50-157 (263)
365 PRK06181 short chain dehydroge 96.1 0.04 8.7E-07 48.6 9.1 74 185-258 1-88 (263)
366 PRK14169 bifunctional 5,10-met 96.1 0.042 9E-07 48.8 8.9 97 161-282 134-231 (282)
367 PF05368 NmrA: NmrA-like famil 96.1 0.034 7.3E-07 48.3 8.4 88 188-276 1-99 (233)
368 PRK08219 short chain dehydroge 96.1 0.11 2.4E-06 44.6 11.6 73 185-258 3-81 (227)
369 PRK15469 ghrA bifunctional gly 96.1 0.018 3.9E-07 52.3 6.8 89 184-281 135-228 (312)
370 PLN02516 methylenetetrahydrofo 96.1 0.042 9.2E-07 49.1 8.9 97 161-282 145-242 (299)
371 PRK08277 D-mannonate oxidoredu 96.1 0.04 8.6E-07 49.2 9.0 74 184-257 9-96 (278)
372 PRK06720 hypothetical protein; 96.0 0.056 1.2E-06 44.5 9.1 41 184-224 15-56 (169)
373 PRK14173 bifunctional 5,10-met 96.0 0.042 9.1E-07 48.9 8.8 96 162-282 134-230 (287)
374 COG0569 TrkA K+ transport syst 96.0 0.061 1.3E-06 46.5 9.7 83 187-270 2-87 (225)
375 COG3288 PntA NAD/NADP transhyd 96.0 0.044 9.6E-07 48.5 8.6 120 184-304 163-309 (356)
376 PRK07454 short chain dehydroge 96.0 0.049 1.1E-06 47.4 9.3 75 184-258 5-93 (241)
377 PRK08251 short chain dehydroge 96.0 0.047 1E-06 47.7 9.2 73 185-257 2-90 (248)
378 PRK14186 bifunctional 5,10-met 96.0 0.044 9.5E-07 49.0 8.8 96 162-282 137-233 (297)
379 PRK07666 fabG 3-ketoacyl-(acyl 96.0 0.032 6.9E-07 48.5 8.0 75 184-258 6-94 (239)
380 PRK12937 short chain dehydroge 96.0 0.12 2.7E-06 44.8 11.7 99 184-282 4-142 (245)
381 PRK06953 short chain dehydroge 96.0 0.053 1.2E-06 46.6 9.2 72 186-258 2-80 (222)
382 PRK07904 short chain dehydroge 96.0 0.041 8.9E-07 48.4 8.6 75 184-258 7-97 (253)
383 PRK05565 fabG 3-ketoacyl-(acyl 96.0 0.084 1.8E-06 45.9 10.6 75 184-258 4-93 (247)
384 PRK07417 arogenate dehydrogena 96.0 0.057 1.2E-06 48.4 9.6 88 187-280 2-92 (279)
385 PRK13255 thiopurine S-methyltr 96.0 0.063 1.4E-06 46.1 9.4 93 184-278 37-154 (218)
386 PRK14183 bifunctional 5,10-met 96.0 0.048 1E-06 48.3 8.8 97 161-282 135-232 (281)
387 PRK07069 short chain dehydroge 96.0 0.11 2.3E-06 45.4 11.2 71 188-258 2-89 (251)
388 COG0673 MviM Predicted dehydro 95.9 0.41 8.9E-06 44.0 15.6 133 186-325 4-148 (342)
389 PRK14166 bifunctional 5,10-met 95.9 0.052 1.1E-06 48.2 8.9 97 161-282 135-232 (282)
390 PLN02233 ubiquinone biosynthes 95.9 0.075 1.6E-06 47.1 10.1 98 182-281 71-184 (261)
391 PRK14170 bifunctional 5,10-met 95.9 0.049 1.1E-06 48.4 8.7 96 162-282 136-232 (284)
392 PRK03659 glutathione-regulated 95.9 0.049 1.1E-06 54.4 9.8 93 185-278 400-497 (601)
393 TIGR01289 LPOR light-dependent 95.9 0.051 1.1E-06 49.6 9.3 75 184-258 2-91 (314)
394 KOG1208 Dehydrogenases with di 95.9 0.084 1.8E-06 48.0 10.4 99 184-282 34-173 (314)
395 TIGR00417 speE spermidine synt 95.9 0.13 2.9E-06 45.8 11.6 95 184-279 72-186 (270)
396 PRK11036 putative S-adenosyl-L 95.9 0.073 1.6E-06 47.0 9.9 92 184-278 44-148 (255)
397 PRK07402 precorrin-6B methylas 95.9 0.17 3.8E-06 42.6 11.9 97 182-279 38-142 (196)
398 PRK14187 bifunctional 5,10-met 95.9 0.051 1.1E-06 48.5 8.7 97 161-282 138-235 (294)
399 PRK12938 acetyacetyl-CoA reduc 95.9 0.1 2.3E-06 45.4 10.7 75 184-258 2-91 (246)
400 PRK06124 gluconate 5-dehydroge 95.9 0.06 1.3E-06 47.3 9.2 75 184-258 10-98 (256)
401 PRK12826 3-ketoacyl-(acyl-carr 95.9 0.055 1.2E-06 47.2 8.9 75 184-258 5-93 (251)
402 TIGR03589 PseB UDP-N-acetylglu 95.9 0.059 1.3E-06 49.4 9.4 75 184-258 3-84 (324)
403 PRK06935 2-deoxy-D-gluconate 3 95.8 0.051 1.1E-06 47.9 8.7 74 184-258 14-101 (258)
404 COG0334 GdhA Glutamate dehydro 95.8 0.077 1.7E-06 49.2 9.8 132 157-294 182-351 (411)
405 PLN02819 lysine-ketoglutarate 95.8 0.096 2.1E-06 54.9 11.6 96 184-279 568-679 (1042)
406 COG0111 SerA Phosphoglycerate 95.8 0.063 1.4E-06 49.0 9.2 89 184-280 141-234 (324)
407 PRK07097 gluconate 5-dehydroge 95.8 0.06 1.3E-06 47.7 9.1 75 184-258 9-97 (265)
408 PRK12746 short chain dehydroge 95.8 0.11 2.3E-06 45.6 10.6 75 184-258 5-100 (254)
409 PRK14618 NAD(P)H-dependent gly 95.8 0.065 1.4E-06 49.2 9.5 90 186-280 5-105 (328)
410 PRK08410 2-hydroxyacid dehydro 95.8 0.095 2.1E-06 47.7 10.4 86 184-281 144-234 (311)
411 PF01209 Ubie_methyltran: ubiE 95.8 0.018 3.9E-07 50.0 5.5 99 182-281 45-155 (233)
412 PRK14184 bifunctional 5,10-met 95.8 0.058 1.3E-06 48.0 8.7 97 161-282 135-236 (286)
413 COG2084 MmsB 3-hydroxyisobutyr 95.8 0.18 3.8E-06 45.0 11.6 89 187-282 2-98 (286)
414 TIGR02356 adenyl_thiF thiazole 95.8 0.095 2.1E-06 44.5 9.7 34 184-217 20-54 (202)
415 PLN02989 cinnamyl-alcohol dehy 95.8 0.041 8.8E-07 50.4 8.0 75 184-258 4-87 (325)
416 PRK06179 short chain dehydroge 95.8 0.037 8.1E-07 49.1 7.5 72 184-258 3-83 (270)
417 PRK05855 short chain dehydroge 95.7 0.12 2.6E-06 51.2 11.8 75 184-258 314-402 (582)
418 PRK08226 short chain dehydroge 95.7 0.082 1.8E-06 46.6 9.6 75 184-258 5-92 (263)
419 PF02558 ApbA: Ketopantoate re 95.7 0.04 8.7E-07 44.2 7.0 89 188-279 1-101 (151)
420 PRK13403 ketol-acid reductoiso 95.7 0.084 1.8E-06 47.7 9.4 87 184-278 15-105 (335)
421 PRK06113 7-alpha-hydroxysteroi 95.7 0.063 1.4E-06 47.2 8.8 75 184-258 10-98 (255)
422 PRK06522 2-dehydropantoate 2-r 95.7 0.089 1.9E-06 47.6 10.0 89 187-278 2-99 (304)
423 PRK14185 bifunctional 5,10-met 95.7 0.068 1.5E-06 47.7 8.7 97 161-282 135-236 (293)
424 PRK14171 bifunctional 5,10-met 95.7 0.061 1.3E-06 47.8 8.4 97 161-282 137-234 (288)
425 PRK07791 short chain dehydroge 95.7 0.065 1.4E-06 48.1 8.9 75 184-258 5-102 (286)
426 PRK01683 trans-aconitate 2-met 95.7 0.12 2.7E-06 45.5 10.5 95 182-279 29-130 (258)
427 PRK06114 short chain dehydroge 95.7 0.066 1.4E-06 47.0 8.7 75 184-258 7-96 (254)
428 PLN02520 bifunctional 3-dehydr 95.7 0.064 1.4E-06 52.6 9.2 94 184-280 378-476 (529)
429 TIGR02622 CDP_4_6_dhtase CDP-g 95.7 0.054 1.2E-06 50.2 8.4 75 184-258 3-85 (349)
430 PRK08945 putative oxoacyl-(acy 95.7 0.076 1.6E-06 46.4 9.0 42 184-225 11-53 (247)
431 PF00106 adh_short: short chai 95.7 0.1 2.2E-06 42.4 9.2 73 186-258 1-90 (167)
432 PRK14182 bifunctional 5,10-met 95.6 0.073 1.6E-06 47.2 8.6 96 162-282 136-232 (282)
433 PRK07775 short chain dehydroge 95.6 0.11 2.4E-06 46.2 10.2 75 184-258 9-97 (274)
434 PRK06077 fabG 3-ketoacyl-(acyl 95.6 0.24 5.2E-06 43.2 12.1 98 184-282 5-143 (252)
435 PLN02897 tetrahydrofolate dehy 95.6 0.065 1.4E-06 48.7 8.4 97 161-282 192-289 (345)
436 PF07991 IlvN: Acetohydroxy ac 95.6 0.068 1.5E-06 43.1 7.6 87 184-278 3-94 (165)
437 PRK14982 acyl-ACP reductase; P 95.6 0.068 1.5E-06 48.9 8.6 93 184-282 154-249 (340)
438 COG0499 SAM1 S-adenosylhomocys 95.6 0.056 1.2E-06 48.9 7.8 91 184-282 208-299 (420)
439 PRK07577 short chain dehydroge 95.6 0.13 2.8E-06 44.4 10.2 69 184-258 2-78 (234)
440 PLN02244 tocopherol O-methyltr 95.6 0.092 2E-06 48.5 9.7 96 183-279 117-223 (340)
441 PRK14167 bifunctional 5,10-met 95.6 0.071 1.5E-06 47.7 8.5 97 161-282 135-236 (297)
442 PLN02986 cinnamyl-alcohol dehy 95.6 0.052 1.1E-06 49.6 8.0 74 184-257 4-86 (322)
443 PRK12384 sorbitol-6-phosphate 95.6 0.074 1.6E-06 46.8 8.7 74 185-258 2-91 (259)
444 PLN02616 tetrahydrofolate dehy 95.6 0.068 1.5E-06 48.8 8.4 97 161-282 209-306 (364)
445 cd01079 NAD_bind_m-THF_DH NAD 95.6 0.076 1.7E-06 44.2 8.0 117 161-282 31-159 (197)
446 COG3268 Uncharacterized conser 95.6 0.058 1.3E-06 48.3 7.7 94 185-278 6-103 (382)
447 PRK08628 short chain dehydroge 95.6 0.07 1.5E-06 46.9 8.5 75 184-258 6-93 (258)
448 PRK01438 murD UDP-N-acetylmura 95.6 0.12 2.5E-06 50.3 10.7 70 184-259 15-89 (480)
449 PRK14193 bifunctional 5,10-met 95.6 0.085 1.8E-06 46.9 8.8 96 162-282 137-235 (284)
450 PF08241 Methyltransf_11: Meth 95.6 0.038 8.3E-07 40.0 5.7 86 191-277 3-95 (95)
451 TIGR01963 PHB_DH 3-hydroxybuty 95.6 0.072 1.6E-06 46.6 8.5 74 185-258 1-88 (255)
452 PRK00107 gidB 16S rRNA methylt 95.6 0.2 4.2E-06 42.0 10.6 94 184-279 45-145 (187)
453 PRK06463 fabG 3-ketoacyl-(acyl 95.6 0.1 2.3E-06 45.8 9.5 74 184-258 6-89 (255)
454 PRK08264 short chain dehydroge 95.5 0.063 1.4E-06 46.6 8.0 71 184-258 5-83 (238)
455 KOG1014 17 beta-hydroxysteroid 95.5 0.16 3.5E-06 45.2 10.1 74 184-258 48-136 (312)
456 PRK14181 bifunctional 5,10-met 95.5 0.093 2E-06 46.7 8.8 97 161-282 131-232 (287)
457 TIGR01505 tartro_sem_red 2-hyd 95.5 0.074 1.6E-06 47.9 8.5 85 188-279 2-93 (291)
458 COG2519 GCD14 tRNA(1-methylade 95.5 0.16 3.5E-06 44.0 9.8 99 182-281 92-197 (256)
459 PRK08993 2-deoxy-D-gluconate 3 95.5 0.088 1.9E-06 46.3 8.7 74 184-258 9-95 (253)
460 COG0190 FolD 5,10-methylene-te 95.5 0.064 1.4E-06 47.2 7.5 97 161-282 134-231 (283)
461 PRK05557 fabG 3-ketoacyl-(acyl 95.5 0.28 6.1E-06 42.5 11.9 75 184-258 4-93 (248)
462 COG0421 SpeE Spermidine syntha 95.5 0.2 4.3E-06 44.7 10.8 92 186-278 78-189 (282)
463 PRK06436 glycerate dehydrogena 95.5 0.1 2.2E-06 47.3 9.1 87 184-282 121-212 (303)
464 PRK08655 prephenate dehydrogen 95.5 0.088 1.9E-06 50.3 9.2 88 187-280 2-93 (437)
465 PF01210 NAD_Gly3P_dh_N: NAD-d 95.5 0.061 1.3E-06 43.6 7.1 88 187-278 1-101 (157)
466 PRK09310 aroDE bifunctional 3- 95.5 0.079 1.7E-06 51.3 8.9 72 184-260 331-402 (477)
467 PF06325 PrmA: Ribosomal prote 95.5 0.02 4.4E-07 51.4 4.5 128 144-282 127-262 (295)
468 PRK08220 2,3-dihydroxybenzoate 95.5 0.2 4.3E-06 43.8 10.9 69 184-258 7-86 (252)
469 PRK05650 short chain dehydroge 95.4 0.099 2.1E-06 46.4 9.1 72 187-258 2-87 (270)
470 PRK06823 ornithine cyclodeamin 95.4 0.15 3.2E-06 46.5 10.2 94 184-282 127-225 (315)
471 PRK07819 3-hydroxybutyryl-CoA 95.4 0.15 3.3E-06 45.8 10.2 40 186-225 6-45 (286)
472 PRK14168 bifunctional 5,10-met 95.4 0.093 2E-06 47.0 8.6 97 161-282 139-240 (297)
473 PRK09135 pteridine reductase; 95.4 0.11 2.5E-06 45.1 9.2 75 184-258 5-95 (249)
474 PF00899 ThiF: ThiF family; I 95.4 0.23 5.1E-06 39.0 10.1 91 185-275 2-119 (135)
475 PLN02730 enoyl-[acyl-carrier-p 95.4 0.16 3.5E-06 46.0 10.3 38 184-222 8-48 (303)
476 PRK08261 fabG 3-ketoacyl-(acyl 95.4 0.015 3.4E-07 55.9 4.0 90 183-283 32-127 (450)
477 PRK12475 thiamine/molybdopteri 95.4 0.073 1.6E-06 49.0 8.1 35 184-218 23-58 (338)
478 TIGR00872 gnd_rel 6-phosphoglu 95.4 0.22 4.8E-06 45.1 11.2 89 187-280 2-94 (298)
479 PRK07856 short chain dehydroge 95.4 0.078 1.7E-06 46.5 8.1 70 184-258 5-85 (252)
480 PRK11559 garR tartronate semia 95.4 0.11 2.5E-06 46.8 9.4 87 187-280 4-97 (296)
481 PRK00312 pcm protein-L-isoaspa 95.4 0.17 3.7E-06 43.2 9.9 94 182-278 76-174 (212)
482 PRK07889 enoyl-(acyl carrier p 95.4 0.12 2.5E-06 45.7 9.1 75 184-258 6-95 (256)
483 PRK08416 7-alpha-hydroxysteroi 95.4 0.1 2.2E-06 46.1 8.7 74 184-257 7-96 (260)
484 PRK15181 Vi polysaccharide bio 95.3 0.081 1.8E-06 49.0 8.4 86 169-257 2-99 (348)
485 PRK12480 D-lactate dehydrogena 95.3 0.12 2.5E-06 47.5 9.2 86 184-280 145-235 (330)
486 PRK06997 enoyl-(acyl carrier p 95.3 0.1 2.2E-06 46.2 8.6 75 184-258 5-94 (260)
487 PRK07102 short chain dehydroge 95.3 0.097 2.1E-06 45.6 8.4 73 186-258 2-86 (243)
488 PLN02896 cinnamyl-alcohol dehy 95.3 0.12 2.6E-06 47.9 9.5 75 184-258 9-89 (353)
489 TIGR03206 benzo_BadH 2-hydroxy 95.3 0.12 2.6E-06 45.1 9.0 75 184-258 2-90 (250)
490 PRK13302 putative L-aspartate 95.3 0.17 3.7E-06 45.1 10.0 89 185-278 6-97 (271)
491 PRK05708 2-dehydropantoate 2-r 95.3 0.11 2.4E-06 47.2 8.9 92 186-278 3-103 (305)
492 PRK01581 speE spermidine synth 95.3 0.37 8.1E-06 44.4 12.1 95 184-280 150-269 (374)
493 PRK08303 short chain dehydroge 95.3 0.11 2.4E-06 47.2 8.9 34 184-217 7-41 (305)
494 PRK14106 murD UDP-N-acetylmura 95.3 0.19 4.1E-06 48.4 11.0 71 184-259 4-79 (450)
495 KOG1200 Mitochondrial/plastidi 95.2 0.11 2.3E-06 43.1 7.6 74 184-257 13-99 (256)
496 PLN02490 MPBQ/MSBQ methyltrans 95.2 0.15 3.3E-06 46.8 9.6 96 184-280 113-216 (340)
497 PRK10637 cysG siroheme synthas 95.2 0.19 4.1E-06 48.4 10.7 117 184-304 11-129 (457)
498 PRK09134 short chain dehydroge 95.2 0.18 4E-06 44.3 10.0 75 184-258 8-97 (258)
499 TIGR00438 rrmJ cell division p 95.2 0.17 3.7E-06 42.3 9.3 92 183-279 31-146 (188)
500 PLN02657 3,8-divinyl protochlo 95.2 0.1 2.3E-06 49.1 8.8 98 184-281 59-183 (390)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=3.7e-69 Score=477.23 Aligned_cols=332 Identities=40% Similarity=0.687 Sum_probs=306.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|||.++..++ ++++++|++.|+|+++||+|||+++|+|++|+|.++|.++...+|.++|||.+|+|+++|++|++||+
T Consensus 4 mkA~~~~~~~--~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k~ 81 (339)
T COG1064 4 MKAAVLKKFG--QPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLKV 81 (339)
T ss_pred eEEEEEccCC--CCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCCC
Confidence 6666665544 44999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||||.+.++..+|++|.+|++|+.++|++... .++..+|+|+||+++|+++++++|+++++++||++.|++.|
T Consensus 82 GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~-------~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT 154 (339)
T COG1064 82 GDRVGVGWLVISCGECEYCRSGNENLCPNQKI-------TGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGIT 154 (339)
T ss_pred CCEEEecCccCCCCCCccccCcccccCCCccc-------cceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeee
Confidence 99999978889999999999999999998433 33468999999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCc
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTL 249 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~ 249 (360)
.|++|++.. ++||++|+|+|+|++|++++|+||.+|++|+++++++++++.+++ +|++++++..+.+......+.+
T Consensus 155 ~y~alk~~~---~~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-lGAd~~i~~~~~~~~~~~~~~~ 230 (339)
T COG1064 155 TYRALKKAN---VKPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-LGADHVINSSDSDALEAVKEIA 230 (339)
T ss_pred EeeehhhcC---CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-hCCcEEEEcCCchhhHHhHhhC
Confidence 999999866 669999999999999999999999999999999999999999999 9999999987555555554559
Q ss_pred CEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC-CC-cccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce-
Q 018158 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAPE-AP-FELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI- 326 (360)
Q Consensus 250 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i- 326 (360)
|+++|+++ ...++.+++.|+++|+++.+|... .. ..++.+.+..+++++.|+..+++.++++++++..++++++.+
T Consensus 231 d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i~ 309 (339)
T COG1064 231 DAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEIL 309 (339)
T ss_pred cEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeEE
Confidence 99999999 778999999999999999999984 44 457888899999999999999999999999999999999999
Q ss_pred EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 327 EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 327 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
+.++++++++||++|++++..||.|+++.
T Consensus 310 e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 310 ETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred eeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 79999999999999999999999999875
No 2
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-64 Score=433.44 Aligned_cols=349 Identities=53% Similarity=0.948 Sum_probs=321.6
Q ss_pred CCCCCcccceeEEeccCCCC--CceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEe
Q 018158 3 QTTPNHTQSVVGWAAHDPSG--KITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKV 80 (360)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~v 80 (360)
+++|++ +. .|...+..+ ++++.+++.|+++++||+||++++|||++|+|.+.|.++..++|.++|||.+|+|+++
T Consensus 4 ~~~p~k-~~--g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~Vvkv 80 (360)
T KOG0023|consen 4 MSIPEK-QF--GWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKV 80 (360)
T ss_pred ccCchh-hE--EEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEE
Confidence 556766 44 455555555 7777999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcccc
Q 018158 81 GSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAA 160 (360)
Q Consensus 81 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a 160 (360)
|++|+.|++||||-+-+...+|+.|++|..++.++|++....+.|....|...+|+||+|+++++.++++||+++.+++|
T Consensus 81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~a 160 (360)
T KOG0023|consen 81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASA 160 (360)
T ss_pred CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhc
Confidence 99999999999999999999999999999999999999989999999999999999999999999999999999999999
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCc-cH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILST-NA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~-~~ 239 (360)
|++.|++.|.|.+|.+.+ +.||+++-|.|+|++|.+++|+||++|.+|++++++..+++.+.+.||++..++.. +.
T Consensus 161 APlLCaGITvYspLk~~g---~~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~ 237 (360)
T KOG0023|consen 161 APLLCAGITVYSPLKRSG---LGPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDP 237 (360)
T ss_pred cchhhcceEEeehhHHcC---CCCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCH
Confidence 999999999999999988 77999999999977999999999999999999999986666666669999999888 66
Q ss_pred HHHHhcCCCcCEEEEcCC--CcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHH
Q 018158 240 MQMQAGKRTLDFILDTVS--AKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVC 317 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l 317 (360)
+..+++.+-.|.+++++. ....+..++++++.+|++|.+|.+...+.++.+++..+.+.+.||..+.+.+.++++++.
T Consensus 238 d~~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~ 317 (360)
T KOG0023|consen 238 DIMKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFV 317 (360)
T ss_pred HHHHHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHH
Confidence 666666666677777776 666789999999999999999999889999999999999999999999999999999999
Q ss_pred hcCCCccceEEECCccHHHHHHHHHcCCCceeEEEecCCC
Q 018158 318 GKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAGG 357 (360)
Q Consensus 318 ~~~~l~~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~ 357 (360)
+++.++.+++..+++++++||++|.+++..+|.|+++..+
T Consensus 318 a~~~ik~~IE~v~~~~v~~a~erm~kgdV~yRfVvD~s~~ 357 (360)
T KOG0023|consen 318 ARGLIKSPIELVKLSEVNEAYERMEKGDVRYRFVVDVSKS 357 (360)
T ss_pred HcCCCcCceEEEehhHHHHHHHHHHhcCeeEEEEEEcccc
Confidence 9999999999999999999999999999999999999765
No 3
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.9e-57 Score=387.59 Aligned_cols=331 Identities=21% Similarity=0.322 Sum_probs=292.0
Q ss_pred cceeEEeccCCCCCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCCCC---CCCCCccccccceEEEEecCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDWGI---TMYPVVPGHEITGIITKVGSNVK 85 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~ 85 (360)
|+|.+| .+++++++++.|.|++ +|+||+|++.+++||.||+|++...... .+.|.++|||.+|+|+++|++|+
T Consensus 5 ~~A~vl---~g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 5 NLALVL---RGKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cceeEE---EccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 554444 4458999999999987 9999999999999999999999875532 34799999999999999999999
Q ss_pred CCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccc
Q 018158 86 NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLC 165 (360)
Q Consensus 86 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~ 165 (360)
++|+||||++.+.. +|+.|++|+.|+||+|+...|..++ ..+|++++|+++++++++|+|++++++++|.+..
T Consensus 82 ~LkVGDrVaiEpg~-~c~~cd~CK~GrYNlCp~m~f~atp------p~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~eP 154 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGL-PCRDCDFCKEGRYNLCPHMVFCATP------PVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEP 154 (354)
T ss_pred ccccCCeEEecCCC-ccccchhhhCcccccCCccccccCC------CcCCceEEEEEechHheeeCCCCCchhhcccccc
Confidence 99999999876654 8999999999999999998776665 6789999999999999999999999999987765
Q ss_pred hhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHH---H
Q 018158 166 AGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAM---Q 241 (360)
Q Consensus 166 ~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~---~ 241 (360)
+..+|||.++.. +++|+++||+|+|++|+.+...||.+|+ +|++++-.+.|++.+++ ||++.+.+....+ .
T Consensus 155 -LsV~~HAcr~~~---vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-~Ga~~~~~~~~~~~~~~ 229 (354)
T KOG0024|consen 155 -LSVGVHACRRAG---VKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKK-FGATVTDPSSHKSSPQE 229 (354)
T ss_pred -hhhhhhhhhhcC---cccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-hCCeEEeeccccccHHH
Confidence 788899998877 7799999999999999999999999999 69999999999999999 9999887655532 2
Q ss_pred HHhc-----C-CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHH
Q 018158 242 MQAG-----K-RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMN 315 (360)
Q Consensus 242 ~~~~-----~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 315 (360)
..+. + ..+|+.|||+|....++.++..++.+|+++.+|.-.....++......+++.+.|+..+...+|..+++
T Consensus 230 ~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~ 309 (354)
T KOG0024|consen 230 LAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIE 309 (354)
T ss_pred HHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHH
Confidence 1111 3 559999999999988999999999999999999888888999999999999999999999889999999
Q ss_pred HHhcCCC--ccce-EEECCccHHHHHHHHHcCCC-ceeEEEecC
Q 018158 316 VCGKYNI--TCNI-EVIKPDQINEALDRLARNDV-RYRFVIDIA 355 (360)
Q Consensus 316 ~l~~~~l--~~~i-~~~~~~~~~~a~~~~~~~~~-~gkvvi~~~ 355 (360)
++++|++ ++.| +.|+++++.+||+.+.+++. .-|+++...
T Consensus 310 li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~ 353 (354)
T KOG0024|consen 310 LVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP 353 (354)
T ss_pred HHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence 9999998 4556 99999999999999998774 348888764
No 4
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1e-55 Score=410.20 Aligned_cols=347 Identities=59% Similarity=1.066 Sum_probs=298.5
Q ss_pred CcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCC
Q 018158 7 NHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 7 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
.++||+.++...+.++.+++.+++.|+|+++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|++|++
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 87 (360)
T PLN02586 8 EHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKK 87 (360)
T ss_pred hchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCc
Confidence 34799999999988899999999999999999999999999999999999887654467899999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
|++||+|++.+...+|+.|.+|..|.+++|++..+.+.+....|...+|+|+||+.+++++++++|+++++++++++++.
T Consensus 88 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~ 167 (360)
T PLN02586 88 FKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCA 167 (360)
T ss_pred cCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcc
Confidence 99999998767667899999999999999998543322111112234799999999999999999999999999999999
Q ss_pred hhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcC
Q 018158 167 GITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGK 246 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~ 246 (360)
+.|+|+++......+ +|++|+|.|+|++|++++|+||.+|++|++++.+++++..+.+++|+++++++.+.+......
T Consensus 168 ~~ta~~al~~~~~~~--~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~ 245 (360)
T PLN02586 168 GITVYSPMKYYGMTE--PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAI 245 (360)
T ss_pred hHHHHHHHHHhcccC--CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhhc
Confidence 999999987665544 899999999999999999999999999998887777665554449999999876654444443
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI 326 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i 326 (360)
.++|++||++|....+..++++++++|+++.+|.......++...++.++..+.++..+..++++++++++.+|++++.+
T Consensus 246 ~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~ 325 (360)
T PLN02586 246 GTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHNITADI 325 (360)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCCCCCcE
Confidence 47999999999866788999999999999999976555566777777788888888887788899999999999999877
Q ss_pred EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 327 EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 327 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
++|+|+|+++|++.+.+++..||+|+++.
T Consensus 326 ~~~~l~~~~~A~~~~~~~~~~gkvvi~~~ 354 (360)
T PLN02586 326 ELIRMDEINTAMERLAKSDVRYRFVIDVA 354 (360)
T ss_pred EEEeHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 89999999999999999998899999873
No 5
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=3e-56 Score=386.18 Aligned_cols=334 Identities=25% Similarity=0.398 Sum_probs=291.8
Q ss_pred EEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEE
Q 018158 14 GWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRA 93 (360)
Q Consensus 14 ~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 93 (360)
....++..++|+++|+++++|++|||+||+.++|+|++|.+.++|..+.. +|.++|||++|+|++||++|+++|+||+|
T Consensus 5 aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkpGDhV 83 (366)
T COG1062 5 AAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKPGDHV 83 (366)
T ss_pred EeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCCCCEE
Confidence 34445678999999999999999999999999999999999999999655 99999999999999999999999999999
Q ss_pred EeccCccCCCCChhhhCCCCCCccccccc-ccccccCCC-------------ccccceeeEEEeecceeEECCCCCCccc
Q 018158 94 AVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIFWDGS-------------ITYGGYSEMLVADYRFVVHVPENIAMDA 159 (360)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~~~~~-------------~~~g~~~~~~~v~~~~~~~iP~~~~~~~ 159 (360)
+ ..+.+.|+.|.+|.+|.+++|...... ..|.+..|. ...++|++|.++++.+++|++++.+++.
T Consensus 84 I-~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~ 162 (366)
T COG1062 84 I-LLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEK 162 (366)
T ss_pred E-EcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCCccc
Confidence 5 578899999999999999999975433 444444432 1235899999999999999999999999
Q ss_pred cccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCcc
Q 018158 160 AAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTN 238 (360)
Q Consensus 160 aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 238 (360)
++.+.|...|.+-+.....+.+ +|+++.|+|.|++|++++|-|+..|+ ++++++.+++|++++++ ||+++++|.++
T Consensus 163 a~llGCgV~TG~Gav~nta~v~--~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~-fGAT~~vn~~~ 239 (366)
T COG1062 163 ACLLGCGVTTGIGAVVNTAKVE--PGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKK-FGATHFVNPKE 239 (366)
T ss_pred eEEEeeeeccChHHhhhcccCC--CCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHh-cCCceeecchh
Confidence 9999999999999988888766 99999999999999999999999999 69999999999999999 99999999987
Q ss_pred HH-H---HHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--CcccChhhHhccCcEEEEeecC---CHH
Q 018158 239 AM-Q---MQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMTG---GMR 308 (360)
Q Consensus 239 ~~-~---~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~---~~~ 308 (360)
.. - .... ..++|++|||+|....+++++++.+++|+.+.+|.... .++.+...+... .+|.|+..+ .+.
T Consensus 240 ~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~~~p~~ 318 (366)
T COG1062 240 VDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGGARPRS 318 (366)
T ss_pred hhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEEeecCCcccc
Confidence 63 2 2223 45999999999999999999999999999999998764 445556666555 999999886 367
Q ss_pred HHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 309 ETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 309 ~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++.+++++..+|+++. .+ ++++|+|+++||+.|.+++.. |.||.+
T Consensus 319 diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~~ 366 (366)
T COG1062 319 DIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIRF 366 (366)
T ss_pred chhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEecC
Confidence 8999999999999864 45 899999999999999999987 666653
No 6
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1e-53 Score=398.07 Aligned_cols=344 Identities=54% Similarity=1.008 Sum_probs=293.4
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
.+|.++..+++++.+++.+++.|+|+++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++|++
T Consensus 5 ~~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~v 84 (375)
T PLN02178 5 NKAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKE 84 (375)
T ss_pred ceeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCC
Confidence 45667777788789999999999999999999999999999999999887644456889999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||||++.+...+|+.|.+|..|++++|++..+...+....|...+|+|+||+.+++++++++|+++++++++++++...|
T Consensus 85 GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~t 164 (375)
T PLN02178 85 GDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGIT 164 (375)
T ss_pred CCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchH
Confidence 99998766666799999999999999998543221111112234799999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHcCCCeEeeCccHHHHHhcCCC
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSK-EKEAKELLGADEFILSTNAMQMQAGKRT 248 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~-~~~~~~~~g~~~~v~~~~~~~~~~~~~~ 248 (360)
+|+++...... .++|++|+|.|+|++|++++|+||.+|++|+++++++++ ++.+++ +|+++++++.+.+.......+
T Consensus 165 a~~al~~~~~~-~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~-lGa~~~i~~~~~~~v~~~~~~ 242 (375)
T PLN02178 165 VYSPMKYYGMT-KESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDR-LGADSFLVTTDSQKMKEAVGT 242 (375)
T ss_pred HHHHHHHhCCC-CCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHh-CCCcEEEcCcCHHHHHHhhCC
Confidence 99998765422 238999999999999999999999999999999877665 566666 999999987654333333347
Q ss_pred cCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccceEE
Q 018158 249 LDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEV 328 (360)
Q Consensus 249 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i~~ 328 (360)
+|++|||+|....+..++++++++|+++.+|.......++...++.+++++.|+.....+++.++++++.+|++++.+++
T Consensus 243 ~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i~~ 322 (375)
T PLN02178 243 MDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIEL 322 (375)
T ss_pred CcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCcccEEE
Confidence 99999999987678999999999999999998765566777778889999999988888899999999999999988888
Q ss_pred ECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 329 IKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 329 ~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
|+|+++++|++.+.+++..||+|++++
T Consensus 323 ~~l~~~~~A~~~~~~~~~~gkvvi~~~ 349 (375)
T PLN02178 323 IKMSDINSAMDRLAKSDVRYRFVIDVA 349 (375)
T ss_pred EeHHHHHHHHHHHHcCCCceEEEEEec
Confidence 999999999999999998899999983
No 7
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.1e-52 Score=389.81 Aligned_cols=345 Identities=48% Similarity=0.919 Sum_probs=297.0
Q ss_pred ceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCC
Q 018158 11 SVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVG 90 (360)
Q Consensus 11 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 90 (360)
+...+....+.+.+++++++.|+|+++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~G 88 (357)
T PLN02514 9 KTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVG 88 (357)
T ss_pred eEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccCC
Confidence 34455556777889999999999999999999999999999999998876444568899999999999999999999999
Q ss_pred CEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhh
Q 018158 91 DRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITV 170 (360)
Q Consensus 91 d~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta 170 (360)
|+|++.+....|+.|.+|..|.++.|.+..+.+.+....|...+|+|+||+.++.+.++++|+++++++++++++.+.||
T Consensus 89 d~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta 168 (357)
T PLN02514 89 DIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTV 168 (357)
T ss_pred CEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHH
Confidence 99987777778999999999999999885332221111233457999999999999999999999999999999999999
Q ss_pred hchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcC
Q 018158 171 FCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLD 250 (360)
Q Consensus 171 ~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d 250 (360)
|+++......+ +|++++|+|+|++|++++|+||.+|++|++++++++++..+++++|+++++++.+.........++|
T Consensus 169 ~~al~~~~~~~--~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~D 246 (357)
T PLN02514 169 YSPLSHFGLKQ--SGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSLD 246 (357)
T ss_pred HHHHHHcccCC--CCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHhcCCCc
Confidence 99998766544 8999999988999999999999999999999988888777765699988887665444444445799
Q ss_pred EEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccceEEEC
Q 018158 251 FILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEVIK 330 (360)
Q Consensus 251 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~ 330 (360)
++||++|....+..++++++++|+++.+|.......++...++.+++++.++......++++++++++++++++.+++|+
T Consensus 247 ~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~~i~~~~ 326 (357)
T PLN02514 247 YIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLTSMIEVVK 326 (357)
T ss_pred EEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCcCcEEEEc
Confidence 99999997667899999999999999999876556677777888999999998888889999999999999987778999
Q ss_pred CccHHHHHHHHHcCCCceeEEEecCCC
Q 018158 331 PDQINEALDRLARNDVRYRFVIDIAGG 357 (360)
Q Consensus 331 ~~~~~~a~~~~~~~~~~gkvvi~~~~~ 357 (360)
++++.+|++.+.+++..||++++++++
T Consensus 327 l~~~~~A~~~~~~~~~~gk~v~~~~~~ 353 (357)
T PLN02514 327 MDYVNTAFERLEKNDVRYRFVVDVAGS 353 (357)
T ss_pred HHHHHHHHHHHHcCCCceeEEEEcccc
Confidence 999999999999999889999998765
No 8
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=2.7e-51 Score=376.30 Aligned_cols=323 Identities=24% Similarity=0.410 Sum_probs=282.0
Q ss_pred EEeccCCC--CCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCC
Q 018158 14 GWAAHDPS--GKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGD 91 (360)
Q Consensus 14 ~~~~~~~~--~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 91 (360)
++..++++ ..++++++|.|+|+++||+|||+++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++||
T Consensus 3 ~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 82 (329)
T TIGR02822 3 EVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGD 82 (329)
T ss_pred eeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCCC
Confidence 34445544 5799999999999999999999999999999999998765444578999999999999999999999999
Q ss_pred EEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhh
Q 018158 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVF 171 (360)
Q Consensus 92 ~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~ 171 (360)
+|++.+....|+.|.+|..|+++.|+...+ .| ...+|+|+||+.+++++++++|+++++++++++++.+.|||
T Consensus 83 ~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g-----~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~ 155 (329)
T TIGR02822 83 RVGIAWLRRTCGVCRYCRRGAENLCPASRY--TG-----WDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGY 155 (329)
T ss_pred EEEEcCccCcCCCChHHhCcCcccCCCccc--CC-----cccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHH
Confidence 998877777899999999999999987543 23 24579999999999999999999999999999999999999
Q ss_pred chhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCE
Q 018158 172 CPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDF 251 (360)
Q Consensus 172 ~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~ 251 (360)
+++... . +++|++|+|+|+|++|++++|+|+.+|++|+++++++++++.+++ +|+++++++.+. ...++|+
T Consensus 156 ~~~~~~-~--~~~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~-~Ga~~vi~~~~~-----~~~~~d~ 226 (329)
T TIGR02822 156 RALLRA-S--LPPGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRLALA-LGAASAGGAYDT-----PPEPLDA 226 (329)
T ss_pred HHHHhc-C--CCCCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH-hCCceecccccc-----CcccceE
Confidence 999753 3 459999999999999999999999999999999999999999999 999999885432 1346899
Q ss_pred EEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccceEEEC
Q 018158 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEVIK 330 (360)
Q Consensus 252 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~ 330 (360)
++++.+....+..++++++++|+++.+|.... ...++...++.+++++.++....++++.++++++.++++++..++|+
T Consensus 227 ~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~i~~~~~ 306 (329)
T TIGR02822 227 AILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVRVTTHTYP 306 (329)
T ss_pred EEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCeeEEEEEe
Confidence 99988877788999999999999999997533 23456666778899999988777888999999999999986558999
Q ss_pred CccHHHHHHHHHcCCCceeEEE
Q 018158 331 PDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 331 ~~~~~~a~~~~~~~~~~gkvvi 352 (360)
|+++++|++.+.+++..||+|+
T Consensus 307 l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 307 LSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred HHHHHHHHHHHHcCCCceEEEe
Confidence 9999999999999999999987
No 9
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=7e-51 Score=380.05 Aligned_cols=338 Identities=22% Similarity=0.401 Sum_probs=284.7
Q ss_pred cceeEEeccCC------CCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCC
Q 018158 10 QSVVGWAAHDP------SGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSN 83 (360)
Q Consensus 10 ~~~~~~~~~~~------~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~ 83 (360)
|||+++..++. ++.+++++++.|+|+++||+|||.+++||++|++.+.|.+ +..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~-~~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDR-PRPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCC-CCCCCccCCccceeEEEEeCCC
Confidence 57777776654 5889999999999999999999999999999999998876 3456899999999999999999
Q ss_pred CCCCCCCCEEEeccCccCCCCChhhhCCCCCCccccccc-ccccccCC-------------CccccceeeEEEeecceeE
Q 018158 84 VKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIFWDG-------------SITYGGYSEMLVADYRFVV 149 (360)
Q Consensus 84 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~~~~-------------~~~~g~~~~~~~v~~~~~~ 149 (360)
+++|++||||++.+ ...|+.|.+|..|.++.|.+.... ..|....+ ....|+|+||+.+++++++
T Consensus 80 v~~~~~GdrV~~~~-~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVF-VPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEcc-CCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence 99999999998744 347999999999999999875322 12221111 0123799999999999999
Q ss_pred ECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHc
Q 018158 150 HVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELL 228 (360)
Q Consensus 150 ~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~ 228 (360)
++|+++++++++++++.+.|||+++.....++ +|++|+|.|+|++|++++|+||.+|+ +|+++++++++++.+++ +
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~--~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~-~ 235 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVR--PGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARE-L 235 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH-c
Confidence 99999999999999999999999986655544 99999999999999999999999999 69999999999999988 9
Q ss_pred CCCeEeeCccHHHH---Hhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--CcccChhhHhccCcEEEEe
Q 018158 229 GADEFILSTNAMQM---QAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--PFELPSFPLIFGKRSVKGS 302 (360)
Q Consensus 229 g~~~~v~~~~~~~~---~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~ 302 (360)
|+++++++.+.+.. ... ..++|++|||+|....+..++++++++|+++.+|.... ...++...++.+++++.++
T Consensus 236 Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 315 (371)
T cd08281 236 GATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGS 315 (371)
T ss_pred CCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEE
Confidence 99999987765322 222 34799999999987778999999999999999997643 3456667788899999998
Q ss_pred ecCC---HHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEE
Q 018158 303 MTGG---MRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 303 ~~~~---~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
.... .++++.+++++.++++++ .+ ++|+|+++++|++.+.+++..+|+|+
T Consensus 316 ~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 316 YMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred ecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 7653 567899999999999975 34 89999999999999999998877653
No 10
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.6e-51 Score=349.61 Aligned_cols=331 Identities=26% Similarity=0.399 Sum_probs=288.2
Q ss_pred cCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEecc
Q 018158 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97 (360)
Q Consensus 18 ~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 97 (360)
.++.++|.++|+.+++|+.+||+||++++++|++|.+.+.|..+...+|.++|||++|+|+.+|.+|+++++||+|+ ..
T Consensus 14 w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~vk~GD~Vi-pl 92 (375)
T KOG0022|consen 14 WEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTTVKPGDHVI-PL 92 (375)
T ss_pred ccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccccCCCCEEe-ec
Confidence 47888999999999999999999999999999999999999877788999999999999999999999999999995 47
Q ss_pred CccCCCCChhhhCCCCCCcccccccc-ccccc-CCC-------------ccccceeeEEEeecceeEECCCCCCcccccc
Q 018158 98 LAAACMECEFCKDSQENYCDKIQFTY-NGIFW-DGS-------------ITYGGYSEMLVADYRFVVHVPENIAMDAAAP 162 (360)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~c~~~~~~~-~g~~~-~~~-------------~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~ 162 (360)
+.+.|++|-+|+++..|+|..+.... .+.+. .|. ....+|+||.++++..+++|++...++.++.
T Consensus 93 f~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcL 172 (375)
T KOG0022|consen 93 FTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCL 172 (375)
T ss_pred cccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCChhheeE
Confidence 88999999999999999999854432 33332 111 2234899999999999999999999999999
Q ss_pred ccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHH
Q 018158 163 LLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ 241 (360)
Q Consensus 163 l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~ 241 (360)
|.|...|+|.|......++ ||+++.|+|.|++|+++++-||..|+ ++++++-++++.+.+++ ||+++++|+.+...
T Consensus 173 LgCGvsTG~GAa~~~Akv~--~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~-fGaTe~iNp~d~~~ 249 (375)
T KOG0022|consen 173 LGCGVSTGYGAAWNTAKVE--PGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKE-FGATEFINPKDLKK 249 (375)
T ss_pred eeccccccchhhhhhcccC--CCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHh-cCcceecChhhccc
Confidence 9999999999998888866 99999999999999999999999999 79999999999999999 99999999985422
Q ss_pred -H----Hhc-CCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCCCcc--cChhhHhccCcEEEEeecC---CHHH
Q 018158 242 -M----QAG-KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEAPFE--LPSFPLIFGKRSVKGSMTG---GMRE 309 (360)
Q Consensus 242 -~----~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~--~~~~~~~~~~~~i~~~~~~---~~~~ 309 (360)
+ .+. +.++|+.|||+|....+.+++.+.+.| |+-+.+|....... +.++.+ ..+.++.|+.++ .+.+
T Consensus 250 ~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l-~~GR~~~Gs~FGG~K~~~~ 328 (375)
T KOG0022|consen 250 PIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQL-VTGRTWKGSAFGGFKSKSD 328 (375)
T ss_pred cHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhh-ccccEEEEEecccccchhh
Confidence 2 222 789999999999999999999999998 99999998765444 444444 457888888775 4678
Q ss_pred HHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 310 TQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 310 ~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+..+++...+++++. .| |.+||+++++||+.|.+++.. |.|+.+
T Consensus 329 iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~~ 375 (375)
T KOG0022|consen 329 IPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLWM 375 (375)
T ss_pred hhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEeC
Confidence 999998888888754 45 999999999999999999987 777753
No 11
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.2e-50 Score=374.49 Aligned_cols=329 Identities=22% Similarity=0.340 Sum_probs=280.5
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+|.++. +++.+++++++.|+|+++||+||+.++++|++|++.+.+.+. ...+|.++|||++|+|+++|++|+.|+
T Consensus 1 mka~~~~---~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (339)
T cd08239 1 MRGAVFP---GDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFR 77 (339)
T ss_pred CeEEEEe---cCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCC
Confidence 4555542 457899999999999999999999999999999998877643 234578999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.+. ..|+.|..|..|+++.|.+..+ ..| ...+|+|+||+.++.++++++|+++++++++++++++.
T Consensus 78 ~Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~-~~g-----~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ 150 (339)
T cd08239 78 VGDRVMVYHY-VGCGACRNCRRGWMQLCTSKRA-AYG-----WNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIG 150 (339)
T ss_pred CCCEEEECCC-CCCCCChhhhCcCcccCcCccc-ccc-----cCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHH
Confidence 9999987544 5899999999999999987543 122 24579999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHH--HHHhc
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAM--QMQAG 245 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~~ 245 (360)
|||+++.... +.+|++|+|+|+|++|++++|+|+.+|++ |+++++++++++.+++ +|+++++++++.+ .....
T Consensus 151 ta~~~l~~~~---~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~ 226 (339)
T cd08239 151 TAYHALRRVG---VSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKA-LGADFVINSGQDDVQEIREL 226 (339)
T ss_pred HHHHHHHhcC---CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCCEEEcCCcchHHHHHHH
Confidence 9999997654 45899999999999999999999999998 9999999999999988 9999999876643 12222
Q ss_pred --CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccC-hhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCC
Q 018158 246 --KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELP-SFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNI 322 (360)
Q Consensus 246 --~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l 322 (360)
++++|++|||+|....+..++++++++|+++.+|..... .+. ...++.+++++.++.....++++++++++.++++
T Consensus 227 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i 305 (339)
T cd08239 227 TSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKL 305 (339)
T ss_pred hCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCC
Confidence 458999999999887678899999999999999976532 333 2456779999999988888899999999999998
Q ss_pred cc--ce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 323 TC--NI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 323 ~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++ .+ ++|+++++++|++.+++++ .||+|+++
T Consensus 306 ~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 306 EVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred ChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 64 45 8999999999999998876 69999875
No 12
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.7e-50 Score=373.68 Aligned_cols=324 Identities=23% Similarity=0.309 Sum_probs=271.2
Q ss_pred CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhc-cCCC--CCCCCCccccccceEEEEecCCCCCCCCCCEEEe
Q 018158 19 DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVK-NDWG--ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAV 95 (360)
Q Consensus 19 ~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 95 (360)
.+++++++++.+.| ++++||||||.+++||++|++++. |.++ ...+|.++|||++|+|+++ ++++|++||||++
T Consensus 11 ~~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~~vGdrV~~ 87 (343)
T PRK09880 11 AGKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGLKEGQTVAI 87 (343)
T ss_pred ecCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccCCCCCEEEE
Confidence 46688999999987 689999999999999999999875 4332 2357899999999999999 7889999999988
Q ss_pred ccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhh
Q 018158 96 GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMK 175 (360)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~ 175 (360)
.+. .+|+.|.+|..|.+++|++..+ .|........+|+|+||+.++++.++++|+++++++++ +...+.+||+++.
T Consensus 88 ~~~-~~cg~c~~c~~g~~~~c~~~~~--~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~~~a~~al~ 163 (343)
T PRK09880 88 NPS-KPCGHCKYCLSHNENQCTTMRF--FGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPLAVAIHAAH 163 (343)
T ss_pred CCC-CCCcCChhhcCCChhhCCCcce--eecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHHHHHHHHHH
Confidence 654 5899999999999999998543 22111111246999999999999999999999987655 4456778999998
Q ss_pred ccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHH--hcCCCcCEE
Q 018158 176 DNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQ--AGKRTLDFI 252 (360)
Q Consensus 176 ~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~--~~~~~~d~v 252 (360)
+.. ..+|++|+|.|+|++|++++|+|+.+|+ +|+++++++++++.+++ +|+++++++++.+... ....++|++
T Consensus 164 ~~~---~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~-lGa~~vi~~~~~~~~~~~~~~g~~D~v 239 (343)
T PRK09880 164 QAG---DLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLARE-MGADKLVNPQNDDLDHYKAEKGYFDVS 239 (343)
T ss_pred hcC---CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHH-cCCcEEecCCcccHHHHhccCCCCCEE
Confidence 765 3489999999999999999999999999 69999999999999998 9999999877643211 113369999
Q ss_pred EEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc--ce-EEE
Q 018158 253 LDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC--NI-EVI 329 (360)
Q Consensus 253 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~--~i-~~~ 329 (360)
|||+|....+..++++++++|+++.+|.......++...++.+++++.++... .+++++++++++++++++ .+ ++|
T Consensus 240 id~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~-~~~~~~~~~l~~~g~i~~~~~i~~~~ 318 (343)
T PRK09880 240 FEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRF-TEEFNTAVSWLANGVINPLPLLSAEY 318 (343)
T ss_pred EECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeec-cccHHHHHHHHHcCCCCchhheEEEE
Confidence 99999876789999999999999999986655667777788899999998754 467899999999999975 45 899
Q ss_pred CCccHHHHHHHHHcCCCceeEEEec
Q 018158 330 KPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 330 ~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++++++|++.+.+++..||+++.+
T Consensus 319 ~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 319 PFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred EHHHHHHHHHHHhcCCCceEEEEeC
Confidence 9999999999999988789999864
No 13
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=4e-50 Score=364.74 Aligned_cols=309 Identities=25% Similarity=0.367 Sum_probs=264.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccC-CCCCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKND-WGITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+++++..++++..++++|+|.|.|++|||||||+++++|+.|++.++|. .+...+|.++|.|++|+|+++|++|++|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 56777878888778999999999999999999999999999999999997 33456899999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||||+..... ..+|+|+||..+|++.++++|+++++++||++++++.
T Consensus 81 ~GdrV~~~~~~--------------------------------~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~ 128 (326)
T COG0604 81 VGDRVAALGGV--------------------------------GRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGL 128 (326)
T ss_pred CCCEEEEccCC--------------------------------CCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHH
Confidence 99999863100 1469999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hh
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~ 244 (360)
|||+++....+++ +|++|||+|+ |++|.+++|+||.+|++++++..++++.+++++ +|+++++++.+.+.. ++
T Consensus 129 TA~~~l~~~~~l~--~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~-lGAd~vi~y~~~~~~~~v~~ 205 (326)
T COG0604 129 TAWLALFDRAGLK--PGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKE-LGADHVINYREEDFVEQVRE 205 (326)
T ss_pred HHHHHHHHhcCCC--CCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHh-cCCCEEEcCCcccHHHHHHH
Confidence 9999999866655 9999999998 999999999999999888878778888887777 999999998886433 22
Q ss_pred c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--CcccChhhHhccCcEEEEeecCCH------HHHHHHH
Q 018158 245 G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMTGGM------RETQEMM 314 (360)
Q Consensus 245 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~ 314 (360)
. ++++|+|||++|.. .+..+++.++++|+++.+|..++ ...++...++.+.+...+...... +.+++++
T Consensus 206 ~t~g~gvDvv~D~vG~~-~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~ 284 (326)
T COG0604 206 LTGGKGVDVVLDTVGGD-TFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELF 284 (326)
T ss_pred HcCCCCceEEEECCCHH-HHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHH
Confidence 2 46899999999987 57889999999999999998773 444566677778888888777644 4567788
Q ss_pred HHHhcCCCccce-EEECCccHHHHHHHHHc-CCCceeEEEec
Q 018158 315 NVCGKYNITCNI-EVIKPDQINEALDRLAR-NDVRYRFVIDI 354 (360)
Q Consensus 315 ~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~-~~~~gkvvi~~ 354 (360)
+++.+|.+++.+ .+||+++..++...... ++..||+|+++
T Consensus 285 ~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 285 DLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred HHHHcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 999999999999 79999996555554433 58889999974
No 14
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=3.5e-49 Score=367.00 Aligned_cols=336 Identities=22% Similarity=0.349 Sum_probs=279.3
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
||++++..++ +++++++++.|+|+++||+|||.++++|++|++.+.|.. ...+|.++|||++|+|+++|+++++|++
T Consensus 2 mka~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 78 (358)
T TIGR03451 2 VRGVIARSKG--APVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGI-NDEFPFLLGHEAAGVVEAVGEGVTDVAP 78 (358)
T ss_pred cEEEEEccCC--CCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCc-cccCCcccccceEEEEEEeCCCCcccCC
Confidence 7777765443 458999999999999999999999999999999998865 3357889999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCccccccccc------ccccCCCccccceeeEEEeecceeEECCCCCCccccccc
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYN------GIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPL 163 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~------g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l 163 (360)
||+|++.+. ..|+.|.+|..|++++|........ |.........|+|+||+.+++++++++|+++++++++++
T Consensus 79 GdrV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l 157 (358)
T TIGR03451 79 GDYVVLNWR-AVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLL 157 (358)
T ss_pred CCEEEEccC-CCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhh
Confidence 999987654 5799999999999999985321110 110000013599999999999999999999999999999
Q ss_pred cchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHHH
Q 018158 164 LCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQM 242 (360)
Q Consensus 164 ~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 242 (360)
++.+.++|+++.....++ +|++|||+|+|++|++++|+|+.+|++ |+++++++++++.+++ +|+++++++.+.+..
T Consensus 158 ~~~~~ta~~~~~~~~~~~--~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~-~Ga~~~i~~~~~~~~ 234 (358)
T TIGR03451 158 GCGVMAGLGAAVNTGGVK--RGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWARE-FGATHTVNSSGTDPV 234 (358)
T ss_pred cccchhhHHHHHhccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCceEEcCCCcCHH
Confidence 999999998876655544 999999999999999999999999995 9999999999999988 999999987664322
Q ss_pred ---Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC--cccChhhHhccCcEEEEeecC---CHHHHHH
Q 018158 243 ---QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP--FELPSFPLIFGKRSVKGSMTG---GMRETQE 312 (360)
Q Consensus 243 ---~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~---~~~~~~~ 312 (360)
... +.++|++|||+|....+..++++++++|+++.+|..... .+++...++.+++++.++... ..+++++
T Consensus 235 ~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 314 (358)
T TIGR03451 235 EAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPM 314 (358)
T ss_pred HHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHH
Confidence 222 457999999999876789999999999999999986532 456666778889999987643 3577899
Q ss_pred HHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 313 MMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 313 ~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+++++.++++++ .+ ++|+++++++|++.+++++.. |+++.
T Consensus 315 ~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 315 LVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred HHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 999999999965 34 899999999999999998876 77764
No 15
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=6.5e-49 Score=366.12 Aligned_cols=337 Identities=23% Similarity=0.351 Sum_probs=272.8
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|++.++ ..+.+.++++++|.|+|+++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++
T Consensus 2 ~~a~~~--~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~ 79 (368)
T TIGR02818 2 SRAAVA--WAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKV 79 (368)
T ss_pred ceEEEE--ecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCC
Confidence 454444 344567999999999999999999999999999999999887654567899999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCccccccc-ccccccC--------C-----CccccceeeEEEeecceeEECCCCC
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIFWD--------G-----SITYGGYSEMLVADYRFVVHVPENI 155 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~~~--------~-----~~~~g~~~~~~~v~~~~~~~iP~~~ 155 (360)
||||++.+ ..+|+.|.+|..|.++.|.+.... ..|.... | ....|+|+||+.+|+++++++|+++
T Consensus 80 GdrV~~~~-~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l 158 (368)
T TIGR02818 80 GDHVIPLY-TAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA 158 (368)
T ss_pred CCEEEEcC-CCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence 99998754 458999999999999999874311 1111100 0 0124799999999999999999999
Q ss_pred CccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEe
Q 018158 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFI 234 (360)
Q Consensus 156 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v 234 (360)
++++++++++++.|||+++.....++ +|++|||+|+|++|++++|+||.+|+ +|+++++++++++.+++ +|+++++
T Consensus 159 ~~~~aa~l~~~~~ta~~a~~~~~~~~--~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~-~Ga~~~i 235 (368)
T TIGR02818 159 PLEEVCLLGCGVTTGIGAVLNTAKVE--EGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKK-LGATDCV 235 (368)
T ss_pred CHHHhhhhcchhHHHHHHHHHhcCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hCCCeEE
Confidence 99999999999999999986655544 99999999999999999999999999 79999999999999988 9999999
Q ss_pred eCccH-----HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCC--CcccChhhHhccCcEEEEeecC
Q 018158 235 LSTNA-----MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMTG 305 (360)
Q Consensus 235 ~~~~~-----~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~ 305 (360)
++.+. ....+. ..++|++|||+|....+..++++++++ |+++.+|.... .+.+....+.. +..+.++...
T Consensus 236 ~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~ 314 (368)
T TIGR02818 236 NPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-GRVWRGSAFG 314 (368)
T ss_pred cccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-cceEEEeecc
Confidence 87641 112222 348999999999877789999999886 99999997642 23333444443 3456666543
Q ss_pred ---CHHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 306 ---GMRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 306 ---~~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
...++.++++++.++++++ .+ ++|+|+++++|++.+.+++. .|+++++
T Consensus 315 ~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 315 GVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred CCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 3467899999999998853 35 89999999999999988765 6999875
No 16
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=9.6e-49 Score=365.72 Aligned_cols=336 Identities=20% Similarity=0.327 Sum_probs=276.6
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|++. ..+++...+++++++.|+|+++||+|||.++++|++|++.+.+.. .+|.++|||++|+|+++|+++++|++
T Consensus 13 mka~--~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~ 87 (378)
T PLN02827 13 CRAA--VAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK 87 (378)
T ss_pred eEEE--EEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence 5544 446666689999999999999999999999999999999887742 35789999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCccccccccccccc--------------CCCccccceeeEEEeecceeEECCCCC
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFW--------------DGSITYGGYSEMLVADYRFVVHVPENI 155 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~--------------~~~~~~g~~~~~~~v~~~~~~~iP~~~ 155 (360)
||+|++.+. .+|+.|.+|..|.+++|.+......|... .+....|+|+||+.++++.++++|+++
T Consensus 88 GdrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l 166 (378)
T PLN02827 88 GDHVLTVFT-GECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA 166 (378)
T ss_pred CCEEEEecC-CCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence 999987654 48999999999999999874221111110 001135899999999999999999999
Q ss_pred CccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEe
Q 018158 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFI 234 (360)
Q Consensus 156 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v 234 (360)
++++++++++.+.++|+++.....++ +|++|||+|+|++|++++|+|+.+|++ |+++++++++++.+++ +|+++++
T Consensus 167 ~~~~aa~l~~~~~~a~~~~~~~~~~~--~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~-lGa~~~i 243 (378)
T PLN02827 167 PLHKICLLSCGVAAGLGAAWNVADVS--KGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKT-FGVTDFI 243 (378)
T ss_pred CHHHhhhhcchhHhhHHHHHhhcCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cCCcEEE
Confidence 99999999999999998776555544 999999999999999999999999995 8888889999999988 9999999
Q ss_pred eCccH--H---HHHhc-CCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCCCcccCh-hhHhccCcEEEEeecC-
Q 018158 235 LSTNA--M---QMQAG-KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEAPFELPS-FPLIFGKRSVKGSMTG- 305 (360)
Q Consensus 235 ~~~~~--~---~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~- 305 (360)
++++. + ..... +.++|++||++|....+..+++.++++ |+++.+|.......+.. ..++.+++++.|+...
T Consensus 244 ~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 323 (378)
T PLN02827 244 NPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGG 323 (378)
T ss_pred cccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCC
Confidence 87652 1 12222 348999999999876789999999998 99999998754444333 3467789999998764
Q ss_pred --CHHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 306 --GMRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 306 --~~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
...+++.+++++.++++++ .+ ++|+|+++++|++.+.+++. +|+||++.
T Consensus 324 ~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~ 377 (378)
T PLN02827 324 WKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP 377 (378)
T ss_pred CchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence 3457889999999999987 56 89999999999999999887 69999764
No 17
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=6.9e-49 Score=367.58 Aligned_cols=337 Identities=23% Similarity=0.390 Sum_probs=275.7
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|++.++ .++.+.+.+++++.|+|+++||+|||+++++|++|++.+.|.+. ...+|.++|||++|+|+++|++++.|+
T Consensus 11 mka~~~--~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~ 88 (381)
T PLN02740 11 CKAAVA--WGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDLK 88 (381)
T ss_pred eEEEEE--ecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCcCC
Confidence 555444 45545689999999999999999999999999999999988753 235689999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCccccccc-cc------cccc----------CCCccccceeeEEEeecceeEEC
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-YN------GIFW----------DGSITYGGYSEMLVADYRFVVHV 151 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~------g~~~----------~~~~~~g~~~~~~~v~~~~~~~i 151 (360)
+||||++.+ ..+|+.|.+|..|.++.|.+.... +. |... .....+|+|+||+.++.++++++
T Consensus 89 vGdrV~~~~-~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~i 167 (381)
T PLN02740 89 AGDHVIPIF-NGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKI 167 (381)
T ss_pred CCCEEEecC-CCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEEC
Confidence 999998765 458999999999999999985321 10 1000 00113699999999999999999
Q ss_pred CCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCC
Q 018158 152 PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGA 230 (360)
Q Consensus 152 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~ 230 (360)
|+++++++++.+++.+.|||+++.....++ +|++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.+++ +|+
T Consensus 168 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~--~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~-~Ga 244 (381)
T PLN02740 168 DPNAPLKKMSLLSCGVSTGVGAAWNTANVQ--AGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKE-MGI 244 (381)
T ss_pred CCCCCHHHhhhhcccchhhHHHHHhccCCC--CCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH-cCC
Confidence 999999999999999999999876655544 99999999999999999999999999 69999999999999988 999
Q ss_pred CeEeeCccH-----HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCCC--cccChhhHhccCcEEEE
Q 018158 231 DEFILSTNA-----MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEAP--FELPSFPLIFGKRSVKG 301 (360)
Q Consensus 231 ~~~v~~~~~-----~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~ 301 (360)
++++++++. +..... ..++|++||++|....+..++.+++++ |+++.+|..... +.+....+ .+++++.|
T Consensus 245 ~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~-~~~~~i~g 323 (381)
T PLN02740 245 TDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMEL-FDGRSITG 323 (381)
T ss_pred cEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHH-hcCCeEEE
Confidence 999987652 122222 338999999999877889999999996 999999987543 23333333 36889998
Q ss_pred eecCC---HHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 302 SMTGG---MRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 302 ~~~~~---~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+..+. ..+++++++++.++.+++ .+ ++|+|+|+++|++.+.+++. .|++|++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 324 SVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred EecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence 87644 357889999999998864 45 89999999999999998876 4999864
No 18
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=6.8e-49 Score=361.33 Aligned_cols=329 Identities=25% Similarity=0.384 Sum_probs=266.8
Q ss_pred CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCC-ccccccceEEEEecCCCCCCCCCCEEEecc
Q 018158 19 DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPV-VPGHEITGIITKVGSNVKNFKVGDRAAVGC 97 (360)
Q Consensus 19 ~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 97 (360)
.+....++++.+.|.+.|+||+|||.+++||+||++++++..+....+. ++|||++|+|+++| .++.+++||||++.
T Consensus 8 ~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~- 85 (350)
T COG1063 8 VGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVE- 85 (350)
T ss_pred ecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCCCEEEEC-
Confidence 4434444777777778999999999999999999999999876556565 99999999999999 77889999999876
Q ss_pred CccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEE-CCCCCCccccccccchhhhhhchhhc
Q 018158 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVH-VPENIAMDAAAPLLCAGITVFCPMKD 176 (360)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~-iP~~~~~~~aa~l~~~~~ta~~~l~~ 176 (360)
...+|+.|.+|+.|.++.|.+..+. |....+...+|+|+||+.+|.++.++ +|+++ ..+++++.-.+.++|++...
T Consensus 86 ~~~~Cg~C~~C~~G~~~~C~~~~~~--g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~ 162 (350)
T COG1063 86 PNIPCGHCRYCRAGEYNLCENPGFY--GYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAE 162 (350)
T ss_pred CCcCCCCChhHhCcCcccCCCcccc--ccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhh
Confidence 4568999999999999999965422 22212222689999999999766555 48888 66777788888999777433
Q ss_pred cCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccH---HHHHhc--CCCcC
Q 018158 177 NNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNA---MQMQAG--KRTLD 250 (360)
Q Consensus 177 ~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~---~~~~~~--~~~~d 250 (360)
..... ++++|+|+|+|++|++++++++.+|+ +|++++++++|++.+++.+|++.+++.... ....+. +.++|
T Consensus 163 ~~~~~--~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D 240 (350)
T COG1063 163 RAAVR--PGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGAD 240 (350)
T ss_pred ccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCCCC
Confidence 33322 56699999999999999999999998 699999999999999995667766665442 112222 56799
Q ss_pred EEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCc-ccChhhHhccCcEEEEeec-CCHHHHHHHHHHHhcCCCccc--e
Q 018158 251 FILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPF-ELPSFPLIFGKRSVKGSMT-GGMRETQEMMNVCGKYNITCN--I 326 (360)
Q Consensus 251 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~l~~~~l~~~--i 326 (360)
++|||+|...++.+++++++++|+++.+|...... .++...+..+++++.|+.. ....+++.+++++.+|++.+. +
T Consensus 241 ~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i~~~~li 320 (350)
T COG1063 241 VVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDPEKLI 320 (350)
T ss_pred EEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCCChhHce
Confidence 99999998888899999999999999999987655 6778889999999999965 556789999999999999764 4
Q ss_pred -EEECCccHHHHHHHHHcCCC-ceeEEEec
Q 018158 327 -EVIKPDQINEALDRLARNDV-RYRFVIDI 354 (360)
Q Consensus 327 -~~~~~~~~~~a~~~~~~~~~-~gkvvi~~ 354 (360)
++++++++++|++.+.+++. ..|+++++
T Consensus 321 t~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 321 THRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred EeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 89999999999999998654 45888864
No 19
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=4e-48 Score=358.70 Aligned_cols=323 Identities=24% Similarity=0.345 Sum_probs=274.9
Q ss_pred CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCC-CCCCCCCccccccceEEEEecCCCCCCCCCCEEEecc
Q 018158 19 DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW-GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97 (360)
Q Consensus 19 ~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 97 (360)
++.+.++++++|.|+++++||+|||.++++|++|++.+.+.. ....+|.++|||++|+|+++|++++.+ +||+|++.+
T Consensus 6 ~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~ 84 (349)
T TIGR03201 6 EPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPA 84 (349)
T ss_pred cCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECC
Confidence 333358999999999999999999999999999999875433 234568899999999999999999887 999998765
Q ss_pred CccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCC------CCCccccccccchhhhhh
Q 018158 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPE------NIAMDAAAPLLCAGITVF 171 (360)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~------~~~~~~aa~l~~~~~ta~ 171 (360)
. .+|+.|.+|..|.+++|....+ .| ...+|+|+||+.++.+.++++|+ ++++++++.+++.+.++|
T Consensus 85 ~-~~cg~c~~c~~g~~~~c~~~~~--~g-----~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~ 156 (349)
T TIGR03201 85 V-IPCGECELCKTGRGTICRAQKM--PG-----NDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPY 156 (349)
T ss_pred C-CCCCCChhhhCcCcccCCCCCc--cC-----cCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHH
Confidence 5 4899999999999999976422 22 23469999999999999999999 899999999999999999
Q ss_pred chhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH--H----HHhc
Q 018158 172 CPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM--Q----MQAG 245 (360)
Q Consensus 172 ~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~----~~~~ 245 (360)
+++.... +++|++|+|+|+|++|++++|+|+.+|++|+++++++++++.+++ +|+++++++.+.+ . ....
T Consensus 157 ~a~~~~~---~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~-~Ga~~~i~~~~~~~~~~~~~~~~~ 232 (349)
T TIGR03201 157 QAAVQAG---LKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKG-FGADLTLNPKDKSAREVKKLIKAF 232 (349)
T ss_pred HHHHhcC---CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-hCCceEecCccccHHHHHHHHHhh
Confidence 9997643 459999999999999999999999999999999999999999988 9999998875531 1 1212
Q ss_pred --CCCcC----EEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhc
Q 018158 246 --KRTLD----FILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGK 319 (360)
Q Consensus 246 --~~~~d----~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ 319 (360)
++++| ++|||+|....+..++++++++|+++.+|.......++...++.++.++.++.....++++.+++++++
T Consensus 233 t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~ 312 (349)
T TIGR03201 233 AKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLD 312 (349)
T ss_pred cccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHc
Confidence 45676 899999988778889999999999999998765556666677778889999887777889999999999
Q ss_pred CCCcc--ceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 320 YNITC--NIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 320 ~~l~~--~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++++ .++.|+|+++++||+.+++++..||+++++
T Consensus 313 g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 313 GKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred CCCCcccceEEecHHHHHHHHHHHHcCCccceEEecC
Confidence 99865 457899999999999999999889999863
No 20
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=3.8e-48 Score=359.71 Aligned_cols=331 Identities=21% Similarity=0.319 Sum_probs=262.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC---CCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI---TMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|+++++. .+..+++++++|.|+|+++||||||++++||++|++.++|.++. ..+|.++|||++|+|+++|++ +.
T Consensus 1 mka~~~~--~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~ 77 (355)
T cd08230 1 MKAIAVK--PGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SG 77 (355)
T ss_pred CceeEec--CCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CC
Confidence 3555554 23234999999999999999999999999999999999987532 235789999999999999999 99
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
|++||||++.+ ...|+.|.+|..|++++|.+..+...|.. ..+|+|+||+.++++.++++|++++ + ++++..+
T Consensus 78 ~~vGdrV~~~~-~~~cg~C~~c~~g~~~~c~~~~~~~~g~~----~~~G~~aey~~~~~~~~~~~P~~~~-~-~a~~~~p 150 (355)
T cd08230 78 LSPGDLVVPTV-RRPPGKCLNCRIGRPDFCETGEYTERGIK----GLHGFMREYFVDDPEYLVKVPPSLA-D-VGVLLEP 150 (355)
T ss_pred CCCCCEEEecc-ccCCCcChhhhCcCcccCCCcceeccCcC----CCCccceeEEEeccccEEECCCCCC-c-ceeecch
Confidence 99999998654 45799999999999999987544333321 2469999999999999999999999 4 3444445
Q ss_pred hhhhhchhhccC----CCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeC---ChhHHHHHHHHcCCCeEeeCccH
Q 018158 167 GITVFCPMKDNN----LIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIST---SPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 167 ~~ta~~~l~~~~----~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~---~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
+.++++++.... .....+|++|+|+|+|++|++++|+||.+|++|+++++ ++++++.+++ +|++. +++.+.
T Consensus 151 ~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~-~Ga~~-v~~~~~ 228 (355)
T cd08230 151 LSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEE-LGATY-VNSSKT 228 (355)
T ss_pred HHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cCCEE-ecCCcc
Confidence 555444443221 11133899999999999999999999999999999997 6788888887 99986 455443
Q ss_pred HHH-HhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--CcccC----hhhHhccCcEEEEeecCCHHHHHH
Q 018158 240 MQM-QAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--PFELP----SFPLIFGKRSVKGSMTGGMRETQE 312 (360)
Q Consensus 240 ~~~-~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~ 312 (360)
+.. .....++|++|||+|....+..+++.++++|+++.+|...+ ..+++ ...++.+++++.|+....+++++.
T Consensus 229 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~ 308 (355)
T cd08230 229 PVAEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQ 308 (355)
T ss_pred chhhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHH
Confidence 211 11246799999999987678999999999999999998764 33444 346778999999998877788999
Q ss_pred HHHHHhcCC------Cccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 313 MMNVCGKYN------ITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 313 ~~~~l~~~~------l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++++.++. +++.+ ++|+++++++|++.+.++. +|+|+++
T Consensus 309 ~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 309 AVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred HHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 999998876 44555 8999999999999887654 5999875
No 21
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=1.1e-47 Score=358.44 Aligned_cols=335 Identities=21% Similarity=0.369 Sum_probs=275.7
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|||.++ ...++.+++++++.|+|+++||+||+.++++|++|++.++|..+...+|.++|||++|+|+++|+++++|++
T Consensus 3 ~ka~~~--~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 3 CKAAVA--WEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred cEEEEE--ecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 565555 344467999999999999999999999999999999999987655567899999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCccccccc-cccccc--------------CCCccccceeeEEEeecceeEECCCC
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIFW--------------DGSITYGGYSEMLVADYRFVVHVPEN 154 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~~--------------~~~~~~g~~~~~~~v~~~~~~~iP~~ 154 (360)
||||++. ...+|+.|.+|..|.++.|.+.... ..|... +.....|+|+||+.+++++++++|++
T Consensus 81 GdrV~~~-~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 159 (369)
T cd08301 81 GDHVLPV-FTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPE 159 (369)
T ss_pred CCEEEEc-cCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCC
Confidence 9999875 4568999999999999999984321 112111 00113589999999999999999999
Q ss_pred CCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeE
Q 018158 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEF 233 (360)
Q Consensus 155 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~ 233 (360)
+++++++++++.+.|||+++.....++ +|++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.+++ +|++.+
T Consensus 160 ~~~~~aa~~~~~~~ta~~~~~~~~~~~--~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~-~Ga~~~ 236 (369)
T cd08301 160 APLDKVCLLSCGVSTGLGAAWNVAKVK--KGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKK-FGVTEF 236 (369)
T ss_pred CCHHHhhhhcchhhHHHHHHHhhcCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCceE
Confidence 999999999999999999877655554 99999999999999999999999999 79999999999999988 999999
Q ss_pred eeCccH-----HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCC--CcccChhhHhccCcEEEEeec
Q 018158 234 ILSTNA-----MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMT 304 (360)
Q Consensus 234 v~~~~~-----~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~ 304 (360)
+++.+. ...... +.++|++||++|....+..++.+++++ |+++.+|.... .+++....++ +++++.++..
T Consensus 237 i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~ 315 (369)
T cd08301 237 VNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-NGRTLKGTLF 315 (369)
T ss_pred EcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-cCCeEEEEec
Confidence 887642 112222 447999999999876788999999996 99999998753 2334433443 6899998865
Q ss_pred CC---HHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEE
Q 018158 305 GG---MRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 305 ~~---~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
.. +.+++.+++++.++.++. .+ ++|+|+++++|++.+.+++.. |+++
T Consensus 316 ~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 316 GGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred CCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 42 357889999999998864 34 899999999999999998864 8876
No 22
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.1e-48 Score=323.86 Aligned_cols=318 Identities=20% Similarity=0.278 Sum_probs=278.1
Q ss_pred CCCCCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEec
Q 018158 2 AQTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVG 81 (360)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG 81 (360)
..++|.. .+.++..-+++...+++++.|.|+|.|+|++||..++|+|..|..+.+|-+.+...|+++|.|.+|+|+++|
T Consensus 2 ~~~~p~~-~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG 80 (336)
T KOG1197|consen 2 AAASPPL-LKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVG 80 (336)
T ss_pred CCCCCch-heEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEec
Confidence 3456655 888888889999999999999999999999999999999999999999999778899999999999999999
Q ss_pred CCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccc
Q 018158 82 SNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAA 161 (360)
Q Consensus 82 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa 161 (360)
++|+++++||||+.. ...|.|+|+..+|...++++|+.+++.+||
T Consensus 81 ~gvtdrkvGDrVayl-----------------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aa 125 (336)
T KOG1197|consen 81 EGVTDRKVGDRVAYL-----------------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAA 125 (336)
T ss_pred CCccccccccEEEEe-----------------------------------ccchhhheeccccceeeccCCcccCHHHHH
Confidence 999999999999863 356999999999999999999999999999
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
++...++|||..+++..+++ +|++||++.+ |++|++++|+++..|++++++..+.++++.+++ .|+++.|+++..+
T Consensus 126 a~llq~lTAy~ll~e~y~vk--pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake-nG~~h~I~y~~eD 202 (336)
T KOG1197|consen 126 ALLLQGLTAYMLLFEAYNVK--PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE-NGAEHPIDYSTED 202 (336)
T ss_pred HHHHHHHHHHHHHHHhcCCC--CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh-cCCcceeeccchh
Confidence 99999999999999988866 9999999988 999999999999999999999999999999999 9999999999886
Q ss_pred HHHhc-----CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCc-ccChhhHhccCcEEE-----EeecCCHH-
Q 018158 241 QMQAG-----KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPF-ELPSFPLIFGKRSVK-----GSMTGGMR- 308 (360)
Q Consensus 241 ~~~~~-----~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~-----~~~~~~~~- 308 (360)
..++. ++|+|+++|.+|.. .+...+++|++.|.+|++|..++.. +++...+.-+.+++. |...+..+
T Consensus 203 ~v~~V~kiTngKGVd~vyDsvG~d-t~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el 281 (336)
T KOG1197|consen 203 YVDEVKKITNGKGVDAVYDSVGKD-TFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVEL 281 (336)
T ss_pred HHHHHHhccCCCCceeeeccccch-hhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHH
Confidence 66554 89999999999987 6899999999999999999877533 344444444444433 22222211
Q ss_pred --HHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEecCCCcC
Q 018158 309 --ETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIAGGAR 359 (360)
Q Consensus 309 --~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~~ 359 (360)
-..+++.++-++.++..| |+|||++..+|+.++++++..||+++.+..+.+
T Consensus 282 ~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~~~ 335 (336)
T KOG1197|consen 282 VSYVARLFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPEKE 335 (336)
T ss_pred HHHHHHHHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEeCCcccc
Confidence 235677788899999999 999999999999999999999999999877653
No 23
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.3e-47 Score=357.55 Aligned_cols=336 Identities=25% Similarity=0.380 Sum_probs=272.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|++.++ ..++++++++++|.|+|+++||+||++++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++
T Consensus 3 ~~a~~~--~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~v 80 (368)
T cd08300 3 CKAAVA--WEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKP 80 (368)
T ss_pred ceEEEE--ecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCC
Confidence 444444 344567999999999999999999999999999999999887755567899999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCccccccc-ccccccCC-------------CccccceeeEEEeecceeEECCCCC
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIFWDG-------------SITYGGYSEMLVADYRFVVHVPENI 155 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~~~~-------------~~~~g~~~~~~~v~~~~~~~iP~~~ 155 (360)
||+|++. ...+|+.|.+|..++++.|.+.... ..|....+ ....|+|+||+.++++.++++|+++
T Consensus 81 GdrV~~~-~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l 159 (368)
T cd08300 81 GDHVIPL-YTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEA 159 (368)
T ss_pred CCEEEEc-CCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCC
Confidence 9999875 5568999999999999999874321 11111000 1124799999999999999999999
Q ss_pred CccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEe
Q 018158 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFI 234 (360)
Q Consensus 156 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v 234 (360)
++++++++++.+.|||+++.....++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+++ +|+++++
T Consensus 160 ~~~~aa~l~~~~~ta~~a~~~~~~~~--~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~-lGa~~~i 236 (368)
T cd08300 160 PLDKVCLLGCGVTTGYGAVLNTAKVE--PGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKK-FGATDCV 236 (368)
T ss_pred ChhhhhhhccchhhhHHHHHHhcCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cCCCEEE
Confidence 99999999999999999886555544 99999999999999999999999999 69999999999999988 9999999
Q ss_pred eCccHH-----HHHhc-CCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCC--CcccChhhHhccCcEEEEeecC
Q 018158 235 LSTNAM-----QMQAG-KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMTG 305 (360)
Q Consensus 235 ~~~~~~-----~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~ 305 (360)
++.+.+ ...+. ..++|++||++|....+..++++++++ |+++.+|.... .+......+. .+..+.++...
T Consensus 237 ~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~ 315 (368)
T cd08300 237 NPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFG 315 (368)
T ss_pred cccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEec
Confidence 876531 12222 348999999999876789999999886 99999997642 2333333333 33466665432
Q ss_pred ---CHHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 306 ---GMRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 306 ---~~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
..++++++++++.++++++ .+ ++|+|+++++|++.+.+++. .|++++
T Consensus 316 ~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 316 GWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred ccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 3577899999999999975 35 89999999999999988875 598875
No 24
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=2.4e-47 Score=355.46 Aligned_cols=333 Identities=25% Similarity=0.424 Sum_probs=274.6
Q ss_pred EEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEE
Q 018158 14 GWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRA 93 (360)
Q Consensus 14 ~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 93 (360)
.+..++..+.++++++|.|+++++||+||++++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++|++||+|
T Consensus 5 a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV 83 (365)
T cd08277 5 AAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKPGDKV 83 (365)
T ss_pred EEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCCCCEE
Confidence 343444556799999999999999999999999999999999988763 4568899999999999999999999999999
Q ss_pred EeccCccCCCCChhhhCCCCCCcccccccccccccCC-------------CccccceeeEEEeecceeEECCCCCCcccc
Q 018158 94 AVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDG-------------SITYGGYSEMLVADYRFVVHVPENIAMDAA 160 (360)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~-------------~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a 160 (360)
++. ...+|+.|.+|..|.+++|.+..+...|....+ ....|+|+||+.++.++++++|++++++++
T Consensus 84 ~~~-~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~a 162 (365)
T cd08277 84 IPL-FIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHV 162 (365)
T ss_pred EEC-CCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCHHHh
Confidence 764 456999999999999999998654433332211 113589999999999999999999999999
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
+++++++.|||+++.....++ +|++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.+++ +|++++++..+.
T Consensus 163 a~l~~~~~ta~~~~~~~~~~~--~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~~i~~~~~ 239 (365)
T cd08277 163 CLLGCGFSTGYGAAWNTAKVE--PGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKE-FGATDFINPKDS 239 (365)
T ss_pred hHhcchhHHHHHHHHhhcCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cCCCcEeccccc
Confidence 999999999999876555544 99999999999999999999999999 79999999999999988 999999887642
Q ss_pred -----HHHHh-cCCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCC-CcccChhhHhccCcEEEEeecCC---HH
Q 018158 240 -----MQMQA-GKRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGG---MR 308 (360)
Q Consensus 240 -----~~~~~-~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~---~~ 308 (360)
+.... .++++|++||++|....+..++++++++ |+++.+|...+ ..+++...+.. ++++.++..+. ..
T Consensus 240 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~ 318 (365)
T cd08277 240 DKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGFKSRS 318 (365)
T ss_pred cchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCCChHH
Confidence 11222 2468999999999876788999999885 99999998653 34445545543 78888876653 45
Q ss_pred HHHHHHHHHhcCCCc--cce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 309 ETQEMMNVCGKYNIT--CNI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 309 ~~~~~~~~l~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+++.+++++.++.++ +.+ ++|+++++++|++.+.+++. .|+++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i~ 365 (365)
T cd08277 319 DVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVIT 365 (365)
T ss_pred HHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEeeC
Confidence 788999999998765 445 89999999999999998874 588873
No 25
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1.2e-47 Score=359.07 Aligned_cols=334 Identities=21% Similarity=0.248 Sum_probs=260.0
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCC-------CCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENG-------VNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGS 82 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~-------~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~ 82 (360)
|++.++ .++++++++++|.|+|+ +|||||||++++||++|++++.|.+ ...+|.++|||++|+|+++|+
T Consensus 3 mka~v~---~~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~-~~~~p~i~GhE~~G~V~~vG~ 78 (393)
T TIGR02819 3 NRGVVY---LGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRT-TAPTGLVLGHEITGEVIEKGR 78 (393)
T ss_pred ceEEEE---ecCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCC-CCCCCccccceeEEEEEEEcC
Confidence 565555 34567999999999874 6899999999999999999998865 345689999999999999999
Q ss_pred CCCCCCCCCEEEeccCccCCCCChhhhCCCCCCccccccc----ccccccCCCccccceeeEEEeecc--eeEECCCCCC
Q 018158 83 NVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFT----YNGIFWDGSITYGGYSEMLVADYR--FVVHVPENIA 156 (360)
Q Consensus 83 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~----~~g~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~ 156 (360)
+|++|++||||++.+. ..|+.|.+|+.|+++.|.+..+. +.|.... ...+|+|+||+.+|+. +++++|++++
T Consensus 79 ~V~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~-~~~~G~~aey~~v~~~~~~l~~vP~~~~ 156 (393)
T TIGR02819 79 DVEFIKIGDIVSVPFN-IACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDM-GGWVGGQSEYVMVPYADFNLLKFPDRDQ 156 (393)
T ss_pred ccccccCCCEEEEecc-cCCCCChHHHCcCcccCcCCCCCCccceeccccc-CCCCCceEEEEEechhhCceEECCCccc
Confidence 9999999999987654 57999999999999999974321 1121100 0236999999999964 7999999875
Q ss_pred c----cccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCC
Q 018158 157 M----DAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGAD 231 (360)
Q Consensus 157 ~----~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~ 231 (360)
. .+++++.+.+.++|+++... . +++|++|+|.|+|++|++++|+|+.+|++ |++++++++|++.+++ +|++
T Consensus 157 ~~~~~~~~a~l~~~~~ta~~a~~~~-~--~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~-~Ga~ 232 (393)
T TIGR02819 157 ALEKIRDLTMLSDIFPTGYHGAVTA-G--VGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARS-FGCE 232 (393)
T ss_pred ccccccceeeeccHHHHHHHHHHhc-C--CCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHH-cCCe
Confidence 3 35678888899999998753 3 45999999988899999999999999997 4556678889999998 9997
Q ss_pred eEeeCc-cH---HHHHhc--CCCcCEEEEcCCCc--------------ccHHHHHHHhccCCEEEEeCCCC-CCc-----
Q 018158 232 EFILST-NA---MQMQAG--KRTLDFILDTVSAK--------------HSLGPILELLKVNGTLSVVGAPE-APF----- 285 (360)
Q Consensus 232 ~~v~~~-~~---~~~~~~--~~~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~~-~~~----- 285 (360)
. +++. +. +..... ++++|++||++|.. ..+.+++++++++|+++.+|... +..
T Consensus 233 ~-v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~ 311 (393)
T TIGR02819 233 T-VDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDA 311 (393)
T ss_pred E-EecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccc
Confidence 4 4432 21 222222 46799999999986 36899999999999999999863 111
Q ss_pred -------ccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc---ce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 286 -------ELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC---NI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 286 -------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~---~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++....++.+++++.++.....+.+.++++++.++++++ .+ ++|+|+++++||+.+.+++. +|+++++
T Consensus 312 ~~~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~Kvvi~~ 390 (393)
T TIGR02819 312 AAKTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-KKFVIDP 390 (393)
T ss_pred cccccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-eEEEEeC
Confidence 122334455667777644333333478999999999864 24 68999999999999998764 8999987
Q ss_pred C
Q 018158 355 A 355 (360)
Q Consensus 355 ~ 355 (360)
.
T Consensus 391 ~ 391 (393)
T TIGR02819 391 H 391 (393)
T ss_pred C
Confidence 4
No 26
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1e-46 Score=349.27 Aligned_cols=328 Identities=24% Similarity=0.322 Sum_probs=267.7
Q ss_pred cceeEEeccCCCCCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
||++++. +++.+++++.|.|+| +++||+|||.++++|++|++.+.+.. ....|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~---~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~ 76 (347)
T PRK10309 1 MKSVVND---TDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLH 76 (347)
T ss_pred CceEEEe---CCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCC
Confidence 4555553 245799999999987 69999999999999999997543211 123578999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.+.. .|+.|.+|..|.++.|.+..+ .| ....|+|+||+.++++.++++|+++++++++.+. ...
T Consensus 77 vGd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~--~g-----~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~ 147 (347)
T PRK10309 77 PGDAVACVPLL-PCFTCPECLRGFYSLCAKYDF--IG-----SRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PIT 147 (347)
T ss_pred CCCEEEECCCc-CCCCCcchhCcCcccCCCcce--ec-----cCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHH
Confidence 99999887555 799999999999999986432 22 2457999999999999999999999999988763 345
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHH--HHHhc
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAM--QMQAG 245 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~~ 245 (360)
++|+++... . +++|++|+|+|+|++|++++|+|+.+|++ |+++++++++++.+++ +|+++++++++.. .....
T Consensus 148 ~~~~~~~~~-~--~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~Ga~~~i~~~~~~~~~~~~~ 223 (347)
T PRK10309 148 VGLHAFHLA-Q--GCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKS-LGAMQTFNSREMSAPQIQSV 223 (347)
T ss_pred HHHHHHHhc-C--CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cCCceEecCcccCHHHHHHH
Confidence 577776443 3 45999999999999999999999999997 7899999999999887 9999998876532 22222
Q ss_pred --CCCcC-EEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccCh---hhHhccCcEEEEeecCC-----HHHHHHHH
Q 018158 246 --KRTLD-FILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPS---FPLIFGKRSVKGSMTGG-----MRETQEMM 314 (360)
Q Consensus 246 --~~~~d-~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~i~~~~~~~-----~~~~~~~~ 314 (360)
+.++| ++|||+|....+..++++++++|+++.+|......+++. ..++.+++++.++.... .+++++++
T Consensus 224 ~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 303 (347)
T PRK10309 224 LRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETAS 303 (347)
T ss_pred hcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHH
Confidence 45788 999999987788999999999999999998765433332 35677899999986542 46788999
Q ss_pred HHHhcCCCc--cce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 315 NVCGKYNIT--CNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 315 ~~l~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++.++.++ +.+ ++|+|+++++|++.+.+++..||+|+++
T Consensus 304 ~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 304 RLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred HHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 999999985 445 8999999999999999998889999976
No 27
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=3.5e-46 Score=343.76 Aligned_cols=330 Identities=29% Similarity=0.537 Sum_probs=287.1
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|++.++ ..+++.+++++++.|+++++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|++++.|++
T Consensus 1 m~a~~~--~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~ 78 (333)
T cd08296 1 YKAVQV--TEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKV 78 (333)
T ss_pred CeEEEE--ccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCC
Confidence 344444 444468999999999999999999999999999999999886644456889999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|++.+..+.|++|.+|..|+++.|....+. +....|++++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~-------~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t 151 (333)
T cd08296 79 GDRVGVGWHGGHCGTCDACRRGDFVHCENGKVT-------GVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVT 151 (333)
T ss_pred CCEEEeccccCCCCCChhhhCcCcccCCCCCcc-------CcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHH
Confidence 999998888889999999999999999875431 1233689999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---HhcC
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QAGK 246 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~ 246 (360)
||+++... . +.++++++|+|+|++|++++|+|+.+|++|+++++++++++.+++ +|+++++++.+.+.. ...
T Consensus 152 a~~~~~~~-~--~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~- 226 (333)
T cd08296 152 TFNALRNS-G--AKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADLARK-LGAHHYIDTSKEDVAEALQEL- 226 (333)
T ss_pred HHHHHHhc-C--CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH-cCCcEEecCCCccHHHHHHhc-
Confidence 99998766 4 449999999999999999999999999999999999999999987 999999887664322 222
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI 326 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i 326 (360)
+++|+++|+.|....+..++++++++|+++.+|......+++...++.+++++.++......++..+++++.++++++.+
T Consensus 227 ~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~v 306 (333)
T cd08296 227 GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMV 306 (333)
T ss_pred CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCceE
Confidence 57999999987666789999999999999999987656666666777899999999887778899999999999988777
Q ss_pred EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 327 EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 327 ~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+.|+++++.+|++.+.+++..||+|++
T Consensus 307 ~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 307 ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 889999999999999999999999874
No 28
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=4.9e-47 Score=349.90 Aligned_cols=314 Identities=16% Similarity=0.188 Sum_probs=249.8
Q ss_pred CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC----CCCCCccccccceEEEEecCCCCCCCCCCEEE
Q 018158 19 DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI----TMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94 (360)
Q Consensus 19 ~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 94 (360)
.+++++++++.+.|+ +++||+|||++++||++|+++++|.+.. ..+|.++|||++|+|+++|.+ .|++||||+
T Consensus 9 ~~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~vGdrV~ 85 (341)
T cd08237 9 VRPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYKVGTKVV 85 (341)
T ss_pred eccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccCCCCEEE
Confidence 455799999999995 9999999999999999999999987532 357999999999999998874 799999998
Q ss_pred eccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchh
Q 018158 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPM 174 (360)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l 174 (360)
+.+.. +|+ |++|. ..+.|.+..+. | ...+|+|+||+.+|+++++++|+++++++|+.+ ..+.++|+++
T Consensus 86 ~~~~~-~~~-~~~~~--~~~~c~~~~~~--g-----~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a~ 153 (341)
T cd08237 86 MVPNT-PVE-KDEII--PENYLPSSRFR--S-----SGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHAI 153 (341)
T ss_pred ECCCC-Cch-hcccc--hhccCCCccee--E-----ecCCCceEEEEEEchHHeEECCCCCChHHhhhh-chHHHHHHHH
Confidence 87654 376 55664 55778764321 2 134699999999999999999999999887644 5778889988
Q ss_pred hccCCCCCCCCcEEEEEcCChHHHHHHHHHHH-cC-CeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEE
Q 018158 175 KDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKA-FG-HHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFI 252 (360)
Q Consensus 175 ~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~-~G-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~v 252 (360)
.......+++|++|+|+|+|++|++++|+++. +| .+|++++++++|++.+++ ++++..++ + .. ...++|++
T Consensus 154 ~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~-~~~~~~~~--~---~~-~~~g~d~v 226 (341)
T cd08237 154 SRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSF-ADETYLID--D---IP-EDLAVDHA 226 (341)
T ss_pred HHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhh-cCceeehh--h---hh-hccCCcEE
Confidence 65433224489999999999999999999996 55 579999999999999887 77654432 1 11 12369999
Q ss_pred EEcCCC---cccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcC-----CCcc
Q 018158 253 LDTVSA---KHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKY-----NITC 324 (360)
Q Consensus 253 id~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-----~l~~ 324 (360)
||++|+ ...+..++++++++|+++.+|......+++...++.+++++.++.....++++++++++.++ ++++
T Consensus 227 iD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 306 (341)
T cd08237 227 FECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNPEVAEYLRK 306 (341)
T ss_pred EECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCCcccCChHH
Confidence 999994 34688999999999999999976555566777788899999999887778899999999998 4566
Q ss_pred ce-EEECCcc---HHHHHHHHHcCCCceeEEEecC
Q 018158 325 NI-EVIKPDQ---INEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 325 ~i-~~~~~~~---~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
.+ ++|++++ +.++++.+.++ ..||+|++++
T Consensus 307 ~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 307 LVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred HhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 66 8899865 55555555444 5799999874
No 29
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=9.4e-46 Score=341.44 Aligned_cols=335 Identities=56% Similarity=0.994 Sum_probs=294.2
Q ss_pred EeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEE
Q 018158 15 WAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94 (360)
Q Consensus 15 ~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 94 (360)
|..+....+|++++++.|++.++||+||++++++|++|++.+.|.+....+|.++|||++|+|+++|+++++|++||+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 82 (337)
T cd05283 3 YAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVG 82 (337)
T ss_pred eEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCEEE
Confidence 55667779999999999999999999999999999999999988775556688999999999999999999999999998
Q ss_pred eccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchh
Q 018158 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPM 174 (360)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l 174 (360)
+.+..+.|++|.+|..+..++|....+...|....+....|+|++|+.++.+.++++|+++++++++.+++.+.+||+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~ 162 (337)
T cd05283 83 VGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPL 162 (337)
T ss_pred EecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHH
Confidence 77788899999999999999998765443343333335579999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEE
Q 018158 175 KDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 175 ~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid 254 (360)
.... ++++++++|.|+|++|++++++|+.+|++|+++++++++++.+++ +|++.+++..+........+++|++||
T Consensus 163 ~~~~---~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~d~v~~ 238 (337)
T cd05283 163 KRNG---VGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALK-LGADEFIATKDPEAMKKAAGSLDLIID 238 (337)
T ss_pred HhcC---CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-cCCcEEecCcchhhhhhccCCceEEEE
Confidence 8765 449999999888999999999999999999999999999999977 999998887765444444678999999
Q ss_pred cCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccceEEECCccH
Q 018158 255 TVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQI 334 (360)
Q Consensus 255 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~ 334 (360)
|+|....+..++++++++|+++.+|.......++...++.+++++.++.....++++.+++++.++++++.++.|+++++
T Consensus 239 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (337)
T cd05283 239 TVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKPWVEVIPMDGI 318 (337)
T ss_pred CCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCccceEEEEHHHH
Confidence 99987557999999999999999998765445566667789999999988888899999999999999877789999999
Q ss_pred HHHHHHHHcCCCceeEEEe
Q 018158 335 NEALDRLARNDVRYRFVID 353 (360)
Q Consensus 335 ~~a~~~~~~~~~~gkvvi~ 353 (360)
++|++.+.+++..||+|++
T Consensus 319 ~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 319 NEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHcCCCcceEeeC
Confidence 9999999999999999875
No 30
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=7.9e-45 Score=338.45 Aligned_cols=335 Identities=24% Similarity=0.322 Sum_probs=277.3
Q ss_pred EeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCC------CC
Q 018158 15 WAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKN------FK 88 (360)
Q Consensus 15 ~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~------~~ 88 (360)
+......+.+++++++.|+|+++||+||+.++++|++|++...|.++...+|.++|||++|+|+++|++++. |+
T Consensus 4 ~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~ 83 (361)
T cd08231 4 AVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEPLK 83 (361)
T ss_pred EEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCccC
Confidence 333444468999999999999999999999999999999999887643567889999999999999999986 99
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc-eeEECCCCCCccccccccchh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR-FVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~-~~~~iP~~~~~~~aa~l~~~~ 167 (360)
+||+|++.+. .+|+.|.+|+.+.++.|++..+.-.+.........|+|++|+.++++ .++++|++++.++++++++.+
T Consensus 84 ~Gd~V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~ 162 (361)
T cd08231 84 VGDRVTWSVG-APCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCAL 162 (361)
T ss_pred CCCEEEEccc-CCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHH
Confidence 9999987644 48999999999999999985432111000011246999999999986 799999999999999999999
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHH------
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAM------ 240 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~------ 240 (360)
.|||+++......+ +++++||+|+|++|++++|+|+.+|+ +|+++++++++.+.+++ +|+++++++++..
T Consensus 163 ~ta~~al~~~~~~~--~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~ 239 (361)
T cd08231 163 ATVLAALDRAGPVG--AGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELARE-FGADATIDIDELPDPQRRA 239 (361)
T ss_pred HHHHHHHHhccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCCeEEcCcccccHHHHH
Confidence 99999998887654 89999999889999999999999999 89999999999998887 9999888776431
Q ss_pred HHHhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--CcccChhhHhccCcEEEEeecCCHHHHHHHHHH
Q 018158 241 QMQAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMTGGMRETQEMMNV 316 (360)
Q Consensus 241 ~~~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 316 (360)
..... ++++|++||++|....+..++++++++|+++.+|.... ...++...++.+++++.++.....+++++++++
T Consensus 240 ~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
T cd08231 240 IVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRF 319 (361)
T ss_pred HHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHHHHH
Confidence 12222 56899999999876678899999999999999997642 334455556888999999887777889999999
Q ss_pred HhcC--CC--ccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 317 CGKY--NI--TCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 317 l~~~--~l--~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+.++ .+ .+.+ ++|+++++++|++.+.+++. +|++|++
T Consensus 320 ~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 320 LERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred HHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 9887 43 3444 88999999999999988874 7999864
No 31
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=9.1e-45 Score=336.78 Aligned_cols=328 Identities=23% Similarity=0.373 Sum_probs=274.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-----------CCCCCCccccccceEEE
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-----------ITMYPVVPGHEITGIIT 78 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-----------~~~~p~~~G~e~~G~V~ 78 (360)
|+|+++. + ++.+++++++.|+|+++||+||+.++++|++|++.+.+... ...+|.++|||++|+|+
T Consensus 1 mka~~~~--~-~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~ 77 (351)
T cd08233 1 MKAARYH--G-RKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVV 77 (351)
T ss_pred CceEEEe--c-CCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEE
Confidence 4555553 3 46899999999999999999999999999999987654210 12368899999999999
Q ss_pred EecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcc
Q 018158 79 KVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMD 158 (360)
Q Consensus 79 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~ 158 (360)
++|+++++|++||+|++.+ ..+|++|.+|.+|.+++|.+..+ .|.. ..+|+|++|+.++.+.++++|++++++
T Consensus 78 ~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~g~~a~~~~~~~~~~~~lP~~~~~~ 150 (351)
T cd08233 78 EVGSGVTGFKVGDRVVVEP-TIKCGTCGACKRGLYNLCDSLGF--IGLG----GGGGGFAEYVVVPAYHVHKLPDNVPLE 150 (351)
T ss_pred EeCCCCCCCCCCCEEEECC-CCCCCCChHHhCcCcccCCCCce--eccC----CCCCceeeEEEechHHeEECcCCCCHH
Confidence 9999999999999998864 44899999999999999986432 1110 126999999999999999999999999
Q ss_pred ccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCc
Q 018158 159 AAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILST 237 (360)
Q Consensus 159 ~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~ 237 (360)
+++.+ ..+.+||+++.. .. +++|++++|+|+|++|++++|+|+.+|+ +|+++++++++.+.+++ +|++.+++++
T Consensus 151 ~aa~~-~~~~ta~~~l~~-~~--~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~ 225 (351)
T cd08233 151 EAALV-EPLAVAWHAVRR-SG--FKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEE-LGATIVLDPT 225 (351)
T ss_pred Hhhhc-cHHHHHHHHHHh-cC--CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCCEEECCC
Confidence 88765 677899999844 44 4499999999999999999999999999 79999999999998887 9999999877
Q ss_pred cHHHH---Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHH
Q 018158 238 NAMQM---QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQE 312 (360)
Q Consensus 238 ~~~~~---~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 312 (360)
+.+.. ... ++++|++||++|....+..++++++++|+++.+|.......++...+..+++++.++.....+++++
T Consensus 226 ~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 305 (351)
T cd08233 226 EVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEE 305 (351)
T ss_pred ccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHH
Confidence 64322 222 4569999999997667899999999999999999876566677777888999999988777788999
Q ss_pred HHHHHhcCCCcc--ce-EEECCccH-HHHHHHHHcCCCc-eeEEE
Q 018158 313 MMNVCGKYNITC--NI-EVIKPDQI-NEALDRLARNDVR-YRFVI 352 (360)
Q Consensus 313 ~~~~l~~~~l~~--~i-~~~~~~~~-~~a~~~~~~~~~~-gkvvi 352 (360)
++++++++++++ .+ ++|+++++ ++|++.+.+++.. ||+||
T Consensus 306 ~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 306 VIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred HHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 999999999953 45 79999996 7999999998875 89987
No 32
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=2e-44 Score=327.90 Aligned_cols=292 Identities=19% Similarity=0.225 Sum_probs=239.0
Q ss_pred CCCCceEEEEeCCCCCCCeEEEEEeeeecc-cchhhhhccCCCC---CCCCCccccccceEEEEecCCCCCCCCCCEEEe
Q 018158 20 PSGKITPYIFKRRENGVNDVTIKILYCGIC-HTDIHHVKNDWGI---TMYPVVPGHEITGIITKVGSNVKNFKVGDRAAV 95 (360)
Q Consensus 20 ~~~~l~~~~~~~p~~~~~evlVkv~~~~i~-~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 95 (360)
+++.+++++.+.|+|+++||+|||++++|| ++|++.++|.++. ..+|.++|||++|+|+++|+++ +|++||||++
T Consensus 9 ~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~~vGdrV~~ 87 (308)
T TIGR01202 9 GPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GFRPGDRVFV 87 (308)
T ss_pred CCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CCCCCCEEEE
Confidence 457899999999999999999999999996 6999988887643 3579999999999999999998 6999999986
Q ss_pred ccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhh
Q 018158 96 GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMK 175 (360)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~ 175 (360)
. |..|..|.. ...|+|+||+.++++.++++|++++++. +.+. ...+||+++.
T Consensus 88 ~-----~~~c~~~~~---------------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~ 139 (308)
T TIGR01202 88 P-----GSNCYEDVR---------------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVA 139 (308)
T ss_pred e-----Ccccccccc---------------------ccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHH
Confidence 2 223332211 1249999999999999999999999864 4444 4689999997
Q ss_pred ccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEE
Q 018158 176 DNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 176 ~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid 254 (360)
... . ++++++|+|+|++|++++|+||.+|++ |+++++++++++.+.+ + .++|+.+. .+.++|++||
T Consensus 140 ~~~--~--~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~-~---~~i~~~~~-----~~~g~Dvvid 206 (308)
T TIGR01202 140 GAE--V--KVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG-Y---EVLDPEKD-----PRRDYRAIYD 206 (308)
T ss_pred hcc--c--CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh-c---cccChhhc-----cCCCCCEEEE
Confidence 632 2 688999999999999999999999997 6667777777766554 3 44554321 3568999999
Q ss_pred cCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc--ce-EEECC
Q 018158 255 TVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC--NI-EVIKP 331 (360)
Q Consensus 255 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~--~i-~~~~~ 331 (360)
|+|....+..++++++++|+++.+|.......++...++.+++++.++.....++++++++++.++++++ .+ ++|+|
T Consensus 207 ~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~it~~~~l 286 (308)
T TIGR01202 207 ASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLITHQRPA 286 (308)
T ss_pred CCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhccceeecH
Confidence 9998767899999999999999999876555666667778889999988777788999999999999975 35 89999
Q ss_pred ccHHHHHHHHHcCCCceeEEEe
Q 018158 332 DQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 332 ~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+++++|++.+.++...+|++++
T Consensus 287 ~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 287 SDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred HHHHHHHHHHhcCcCceEEEeC
Confidence 9999999998877667899874
No 33
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1e-42 Score=323.11 Aligned_cols=333 Identities=20% Similarity=0.236 Sum_probs=270.5
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+|.++. + ++.+.+++.+.|.+.++||+||+.++++|++|++.+.+.+.....|.++|||++|+|+++|+++++|++
T Consensus 1 mka~~~~--~-~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~ 77 (351)
T cd08285 1 MKAFAML--G-IGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKP 77 (351)
T ss_pred CceEEEc--c-CCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCC
Confidence 4555553 3 346889999999999999999999999999999988876654566889999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc--eeEECCCCCCccccccccchh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR--FVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~aa~l~~~~ 167 (360)
||+|++.+.. +|+.|..|..|+++.|.+... |+. .+....|+|++|+.++.+ .++++|+++++++++.++..+
T Consensus 78 Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~---~~~-~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~ 152 (351)
T cd08285 78 GDRVIVPAIT-PDWRSVAAQRGYPSQSGGMLG---GWK-FSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMM 152 (351)
T ss_pred CCEEEEcCcC-CCCCCHHHHCcCcccCcCCCC---Ccc-ccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccch
Confidence 9999886654 799999999999999987421 111 122457999999999974 899999999999999999999
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HH
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQ 243 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~ 243 (360)
.|||+++... . +++++++||+|+|++|++++|+|+.+|+ .|+++++++++.+.+++ +|+++++++.+.+. ..
T Consensus 153 ~ta~~~~~~~-~--~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~i~ 228 (351)
T cd08285 153 STGFHGAELA-N--IKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKE-YGATDIVDYKNGDVVEQIL 228 (351)
T ss_pred hhHHHHHHcc-C--CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cCCceEecCCCCCHHHHHH
Confidence 9999997543 3 4599999999889999999999999999 58999999999888888 99999988765422 22
Q ss_pred hc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC--cccCh--hhHhccCcEEEEeec-CCHHHHHHHHHH
Q 018158 244 AG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP--FELPS--FPLIFGKRSVKGSMT-GGMRETQEMMNV 316 (360)
Q Consensus 244 ~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~--~~~~~~~~~i~~~~~-~~~~~~~~~~~~ 316 (360)
.. ++++|+++|++|....+..++++++++|+++.+|..... ..++. .....+..++.+... ..++++++++++
T Consensus 229 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 308 (351)
T cd08285 229 KLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASL 308 (351)
T ss_pred HHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHH
Confidence 22 467999999999876789999999999999999976542 22221 222345566666543 245678999999
Q ss_pred HhcCCCcc---ce-EEECCccHHHHHHHHHcCCC-ceeEEEec
Q 018158 317 CGKYNITC---NI-EVIKPDQINEALDRLARNDV-RYRFVIDI 354 (360)
Q Consensus 317 l~~~~l~~---~i-~~~~~~~~~~a~~~~~~~~~-~gkvvi~~ 354 (360)
+.+|++++ .+ +.|+++++++|++.+.+++. .+|+++++
T Consensus 309 ~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 309 IEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred HHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 99999987 34 56999999999999999874 58999864
No 34
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.3e-42 Score=320.92 Aligned_cols=331 Identities=30% Similarity=0.464 Sum_probs=280.3
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC---CCCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG---ITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|+++++... .+.+.+++.+.|++.+++|+||+.++++|++|++...|.++ ...+|.++|+|++|+|+++|+++..
T Consensus 1 ~ka~~~~~~--~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~ 78 (340)
T cd05284 1 MKAARLYEY--GKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDG 78 (340)
T ss_pred CeeeEeccC--CCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCc
Confidence 355555432 25789999999999999999999999999999999888663 3456788999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
|++||+|++.+.. .|+.|..|..|..++|.+..+. |+ ...|+|++|+.++.+.++++|+++++++++.+++.
T Consensus 79 ~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~ 150 (340)
T cd05284 79 LKEGDPVVVHPPW-GCGTCRYCRRGEENYCENARFP--GI-----GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADA 150 (340)
T ss_pred CcCCCEEEEcCCC-CCCCChHHhCcCcccCCCCccc--Cc-----cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcch
Confidence 9999999886654 8999999999999999986542 32 45699999999999999999999999999999999
Q ss_pred hhhhhchhhcc-CCCCCCCCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCeEeeCccH--HHH
Q 018158 167 GITVFCPMKDN-NLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNA--MQM 242 (360)
Q Consensus 167 ~~ta~~~l~~~-~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~ 242 (360)
+.|||+++... .... ++++++|+|+|++|++++|+|+.+| .+|+++++++++.+.+++ +|+++++++++. ...
T Consensus 151 ~~ta~~~l~~~~~~~~--~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~i 227 (340)
T cd05284 151 GLTAYHAVKKALPYLD--PGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAER-LGADHVLNASDDVVEEV 227 (340)
T ss_pred HHHHHHHHHHhcccCC--CCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH-hCCcEEEcCCccHHHHH
Confidence 99999999775 3444 8999999999779999999999999 799999999999999977 999999887764 122
Q ss_pred Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcC
Q 018158 243 QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKY 320 (360)
Q Consensus 243 ~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 320 (360)
... +.++|+++|++|.......++++++++|+++.+|.... ..++....+.+++++.++.....+.++.+++++.++
T Consensus 228 ~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 306 (340)
T cd05284 228 RELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESG 306 (340)
T ss_pred HHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhC
Confidence 222 45799999999976578999999999999999987653 334444445688898888776777899999999999
Q ss_pred CCccceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 321 NITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 321 ~l~~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.+++.++.|+++++++|++.+++++..||+++.+
T Consensus 307 ~l~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 307 KVKVEITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred CCCcceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 9987778899999999999999999889999864
No 35
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=1.8e-42 Score=320.02 Aligned_cols=321 Identities=21% Similarity=0.260 Sum_probs=263.5
Q ss_pred CCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCcc
Q 018158 21 SGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAA 100 (360)
Q Consensus 21 ~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 100 (360)
++.+.+++++.|+|+++|++||+.++++|++|++.+.|.++...+|.++|||++|+|+++|++|+.|++||+|++.+..
T Consensus 9 ~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~- 87 (339)
T PRK10083 9 PNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVI- 87 (339)
T ss_pred CCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCCEEEEcccc-
Confidence 4689999999999999999999999999999999988876544568999999999999999999999999999887655
Q ss_pred CCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCC
Q 018158 101 ACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI 180 (360)
Q Consensus 101 ~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~ 180 (360)
+|+.|.+|.++++++|....+ . +...+|+|++|+.++.++++++|+++++++++ +...+.++|+++.. ..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~~~~-~~- 157 (339)
T PRK10083 88 SCGHCYPCSIGKPNVCTSLVV--L-----GVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANVTGR-TG- 157 (339)
T ss_pred CCCCCccccCcCcccCCCCce--E-----EEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHHHHh-cC-
Confidence 699999999999999976432 1 11346999999999999999999999998766 55667778865543 34
Q ss_pred CCCCCcEEEEEcCChHHHHHHHHHHH-cCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhc---CCCcCEEEEc
Q 018158 181 DSPAKKRIGIVGLGGLGHVAVKFGKA-FGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG---KRTLDFILDT 255 (360)
Q Consensus 181 ~~~~~~~vlI~Gag~vG~~aiqla~~-~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~---~~~~d~vid~ 255 (360)
+++|++|+|+|+|++|++++|+|+. +|++ ++++++++++++.+++ +|+++++++++....+.. +.++|++||+
T Consensus 158 -~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~-~Ga~~~i~~~~~~~~~~~~~~g~~~d~vid~ 235 (339)
T PRK10083 158 -PTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKE-SGADWVINNAQEPLGEALEEKGIKPTLIIDA 235 (339)
T ss_pred -CCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHH-hCCcEEecCccccHHHHHhcCCCCCCEEEEC
Confidence 4499999999999999999999996 6995 7778888999998888 999999987654222222 3346799999
Q ss_pred CCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc--ce-EEECCc
Q 018158 256 VSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC--NI-EVIKPD 332 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~--~i-~~~~~~ 332 (360)
+|....+..++++++++|+++.+|.......+....+..+++++.++.. ..+.++.+++++.++.+++ .+ +.|+++
T Consensus 236 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~ 314 (339)
T PRK10083 236 ACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRL-NANKFPVVIDWLSKGLIDPEKLITHTFDFQ 314 (339)
T ss_pred CCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEec-ChhhHHHHHHHHHcCCCChHHheeeeecHH
Confidence 9976678999999999999999997654333344444567777777654 4567899999999999976 24 899999
Q ss_pred cHHHHHHHHHcCC-CceeEEEecC
Q 018158 333 QINEALDRLARND-VRYRFVIDIA 355 (360)
Q Consensus 333 ~~~~a~~~~~~~~-~~gkvvi~~~ 355 (360)
++++|++.+.+++ ..+|+++++.
T Consensus 315 ~~~~a~~~~~~~~~~~~kvvv~~~ 338 (339)
T PRK10083 315 HVADAIELFEKDQRHCCKVLLTFA 338 (339)
T ss_pred HHHHHHHHHhcCCCceEEEEEecC
Confidence 9999999998654 4589999875
No 36
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=3e-42 Score=321.74 Aligned_cols=336 Identities=24% Similarity=0.376 Sum_probs=266.9
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|++.++ ..+++.++++++|.|++.++||+||++++++|++|++.+.|.+ ...+|.++|||++|+|+++|++++.|++
T Consensus 8 ~~a~~~--~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~-~~~~p~v~G~e~~G~V~~vG~~v~~~~~ 84 (373)
T cd08299 8 CKAAVL--WEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL-VTPFPVILGHEAAGIVESVGEGVTTVKP 84 (373)
T ss_pred eEEEEE--ecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCC-CCCCCccccccceEEEEEeCCCCccCCC
Confidence 444433 4555679999999999999999999999999999999998876 3457889999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCccccccc-ccccccC--------C-----CccccceeeEEEeecceeEECCCCC
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIFWD--------G-----SITYGGYSEMLVADYRFVVHVPENI 155 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~~~--------~-----~~~~g~~~~~~~v~~~~~~~iP~~~ 155 (360)
||+|++.+ ..+|++|.+|..++++.|+..... ..|+... | ....|+|+||+.++.++++++|+++
T Consensus 85 Gd~V~~~~-~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l 163 (373)
T cd08299 85 GDKVIPLF-VPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA 163 (373)
T ss_pred CCEEEECC-CCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence 99998755 679999999999999999874321 1111100 0 1136899999999999999999999
Q ss_pred CccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEe
Q 018158 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFI 234 (360)
Q Consensus 156 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v 234 (360)
++++++++++.+.+||+++.....++ ++++++|+|+|++|++++++|+.+|+ +|+++++++++++.+++ +|+++++
T Consensus 164 ~~~~aa~~~~~~~ta~~~~~~~~~~~--~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~-lGa~~~i 240 (373)
T cd08299 164 PLEKVCLIGCGFSTGYGAAVNTAKVT--PGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKE-LGATECI 240 (373)
T ss_pred ChHHhheeccchHHHHHHHHhccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCceEe
Confidence 99999999999999999876655544 99999999889999999999999999 79999999999999988 9999988
Q ss_pred eCccHH-----HHHh-cCCCcCEEEEcCCCcccHHHHHHHh-ccCCEEEEeCCCCCC--cccChhhHhccCcEEEEeecC
Q 018158 235 LSTNAM-----QMQA-GKRTLDFILDTVSAKHSLGPILELL-KVNGTLSVVGAPEAP--FELPSFPLIFGKRSVKGSMTG 305 (360)
Q Consensus 235 ~~~~~~-----~~~~-~~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~ 305 (360)
+..+.+ .... ..+++|+++||+|....+..++..+ +++|+++.+|..... .++... .+.++.++.++...
T Consensus 241 ~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~~~~~~ 319 (373)
T cd08299 241 NPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLTGRTWKGAVFG 319 (373)
T ss_pred cccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhcCCeEEEEEec
Confidence 765421 1111 2457999999999766677766655 579999999976532 333332 23456788887664
Q ss_pred C---HHHHHHHHHHHhcCCCc--cce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 306 G---MRETQEMMNVCGKYNIT--CNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 306 ~---~~~~~~~~~~l~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
. .+++.++++.+.++.++ +.+ +.|+++++++|++.+.+++. .|+++++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 320 GWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred CCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 3 24666777777766543 334 89999999999999988775 4888754
No 37
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=1.1e-42 Score=328.48 Aligned_cols=319 Identities=16% Similarity=0.227 Sum_probs=251.3
Q ss_pred eeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhh-ccCCCC------CCCCCccccccceEEEEecCCC
Q 018158 12 VVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHV-KNDWGI------TMYPVVPGHEITGIITKVGSNV 84 (360)
Q Consensus 12 ~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~-~g~~~~------~~~p~~~G~e~~G~V~~vG~~v 84 (360)
++++..+++ +.++++++|.|+++++||+|||.+++||++|++.+ .|.... ..+|.++|||++|+|+++|++|
T Consensus 3 ~~a~~~~~~-~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v 81 (410)
T cd08238 3 TKAWRMYGK-GDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKW 81 (410)
T ss_pred cEEEEEEcC-CceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCc
Confidence 334444554 57999999999999999999999999999999976 453211 2368899999999999999999
Q ss_pred C-CCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc----eeEECCCCCCccc
Q 018158 85 K-NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR----FVVHVPENIAMDA 159 (360)
Q Consensus 85 ~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~----~~~~iP~~~~~~~ 159 (360)
+ .|++||||++.+. ..|+.|..|. + + +...+|+|+||+.++++ +++++|+++++++
T Consensus 82 ~~~~~vGdrV~~~~~-~~c~~~~~c~-~---~--------------g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~ 142 (410)
T cd08238 82 QGKYKPGQRFVIQPA-LILPDGPSCP-G---Y--------------SYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAE 142 (410)
T ss_pred cCCCCCCCEEEEcCC-cCCCCCCCCC-C---c--------------cccCCCcceEEEEecHHhccCCeEECCCCCCHHH
Confidence 8 5999999987644 3688887762 1 0 11346999999999987 6899999999998
Q ss_pred cccc-c--chhhhhhchhh--------ccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCC---eEEEEeCChhHHHHH
Q 018158 160 AAPL-L--CAGITVFCPMK--------DNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGH---HVTVISTSPSKEKEA 224 (360)
Q Consensus 160 aa~l-~--~~~~ta~~~l~--------~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~---~V~~~~~~~~~~~~~ 224 (360)
++.+ + +. .++++++. .... +++|++|+|+|+ |++|++++|+|+.+|+ +|++++++++|++.+
T Consensus 143 aal~epl~~~-~~~~~a~~~~~~~~~~~~~~--~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a 219 (410)
T cd08238 143 ASLVEPLSCV-IGAYTANYHLQPGEYRHRMG--IKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA 219 (410)
T ss_pred HhhcchHHHH-HHHhhhcccccccchhhhcC--CCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence 8754 2 32 23344332 2233 459999999986 9999999999999864 799999999999999
Q ss_pred HHHc--------CCC-eEeeCcc-H---HHHHh--cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCC-CC--Ccc
Q 018158 225 KELL--------GAD-EFILSTN-A---MQMQA--GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAP-EA--PFE 286 (360)
Q Consensus 225 ~~~~--------g~~-~~v~~~~-~---~~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~--~~~ 286 (360)
++ + |++ .++++.+ . ..... .++++|++||++|....+..++++++++|+++.++.. .. ..+
T Consensus 220 ~~-~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~ 298 (410)
T cd08238 220 QR-LFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAP 298 (410)
T ss_pred HH-hccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCcccc
Confidence 88 6 665 4676643 1 11222 2568999999998877889999999999988776432 22 245
Q ss_pred cChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 287 LPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 287 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
++...++.+++++.|+.....++++++++++.+|++++ .+ ++|+|+++++|++.+. ++..||+|+.++
T Consensus 299 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~ 369 (410)
T cd08238 299 LNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ 369 (410)
T ss_pred ccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence 66667888999999998878889999999999999977 45 8999999999999999 777899999874
No 38
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=4.6e-42 Score=317.08 Aligned_cols=318 Identities=28% Similarity=0.498 Sum_probs=271.3
Q ss_pred EEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCC
Q 018158 26 PYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMEC 105 (360)
Q Consensus 26 ~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~ 105 (360)
++++|.|+++++||+||++++++|++|++.+.|.++ ...|.++|||++|+|+++|++++.|++||+|++.+....|+.|
T Consensus 15 ~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~ 93 (338)
T PRK09422 15 VVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFG-DKTGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHC 93 (338)
T ss_pred EEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCC-CCCCccCCcccceEEEEECCCCccCCCCCEEEEccCCCCCCCC
Confidence 899999999999999999999999999998888663 2346789999999999999999999999999998888999999
Q ss_pred hhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCC
Q 018158 106 EFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAK 185 (360)
Q Consensus 106 ~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~ 185 (360)
.+|..+..++|.+..+ .+....|+|++|+.++.++++++|+++++++++.++..+.|||+++. ...+ +++
T Consensus 94 ~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~~-~~~~--~~g 163 (338)
T PRK09422 94 EYCTTGRETLCRSVKN-------AGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAIK-VSGI--KPG 163 (338)
T ss_pred hhhcCCCcccCCCccc-------cCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHHH-hcCC--CCC
Confidence 9999999999987532 12245799999999999999999999999999999999999999984 3444 499
Q ss_pred cEEEEEcCChHHHHHHHHHHH-cCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc-H---HHHHhcCCCcCEEEEcCCCcc
Q 018158 186 KRIGIVGLGGLGHVAVKFGKA-FGHHVTVISTSPSKEKEAKELLGADEFILSTN-A---MQMQAGKRTLDFILDTVSAKH 260 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~-~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~---~~~~~~~~~~d~vid~~g~~~ 260 (360)
++++|+|+|++|++++++|+. .|++|+++++++++++.+++ +|++.+++++. . ........++|+++++.+...
T Consensus 164 ~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~v~~~~~~~d~vi~~~~~~~ 242 (338)
T PRK09422 164 QWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKE-VGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKA 242 (338)
T ss_pred CEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHH-cCCcEEecccccccHHHHHHHhcCCCcEEEEeCCCHH
Confidence 999999999999999999998 49999999999999999977 99998888754 2 222223337896665555556
Q ss_pred cHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccceEEECCccHHHHHHH
Q 018158 261 SLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDR 340 (360)
Q Consensus 261 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~a~~~ 340 (360)
.+..++++++.+|+++.+|.......++...+..++.++.++.....++++.+++++.++.+.+.++.++++++++|++.
T Consensus 243 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~v~~~~~~~~~~a~~~ 322 (338)
T PRK09422 243 AFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPKVQLRPLEDINDIFDE 322 (338)
T ss_pred HHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCccEEEEcHHHHHHHHHH
Confidence 78999999999999999987654455555666778888888776667889999999999998776777999999999999
Q ss_pred HHcCCCceeEEEecC
Q 018158 341 LARNDVRYRFVIDIA 355 (360)
Q Consensus 341 ~~~~~~~gkvvi~~~ 355 (360)
+.+++..||+++++.
T Consensus 323 ~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 323 MEQGKIQGRMVIDFT 337 (338)
T ss_pred HHcCCccceEEEecC
Confidence 999998999998753
No 39
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=4.5e-42 Score=320.02 Aligned_cols=335 Identities=24% Similarity=0.372 Sum_probs=273.9
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+|.++ .++.+.+++++.+.|++.++||+||+.++++|++|++...|.++ ..+|.++|||++|+|+++|++++.|++
T Consensus 3 ~~a~~~--~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 3 TTAAVV--REPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred cEEeee--ccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 555555 44445789999999999999999999999999999999988763 456789999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCccccccc-ccccccCC---------------CccccceeeEEEeecceeEECCC
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIFWDG---------------SITYGGYSEMLVADYRFVVHVPE 153 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~~~~---------------~~~~g~~~~~~~v~~~~~~~iP~ 153 (360)
||+|++.+ . .|+.|..|..++.++|.+.... +.|....| ....|+|++|+.+++++++++|+
T Consensus 80 Gd~V~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~ 157 (365)
T cd08278 80 GDHVVLSF-A-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK 157 (365)
T ss_pred CCEEEEcc-c-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence 99998854 3 7999999999999999874322 22221111 12358999999999999999999
Q ss_pred CCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCe
Q 018158 154 NIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADE 232 (360)
Q Consensus 154 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~ 232 (360)
++++++++.+++++.|||.++.....++ ++++++|+|+|++|++++|+|+.+|+ +|+++++++++.+.+++ +|++.
T Consensus 158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~--~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~-~g~~~ 234 (365)
T cd08278 158 DVPLELLAPLGCGIQTGAGAVLNVLKPR--PGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKE-LGATH 234 (365)
T ss_pred CCCHHHhhhhcchhhhhhHHHhhhcCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cCCcE
Confidence 9999999999999999999987666655 99999999889999999999999999 59999999999988887 99998
Q ss_pred EeeCccHHH---HHh-cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC--CCcccChhhHhccCcEEEEeecC-
Q 018158 233 FILSTNAMQ---MQA-GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE--APFELPSFPLIFGKRSVKGSMTG- 305 (360)
Q Consensus 233 ~v~~~~~~~---~~~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~- 305 (360)
++++.+.+. ... .+.++|+++||+|....+..++++++++|+++.+|... ....++...++.++.++.++...
T Consensus 235 ~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (365)
T cd08278 235 VINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGD 314 (365)
T ss_pred EecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCC
Confidence 888765322 211 15689999999997767899999999999999999753 23455555665788888776543
Q ss_pred --CHHHHHHHHHHHhcCCCcc--ceEEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 306 --GMRETQEMMNVCGKYNITC--NIEVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 306 --~~~~~~~~~~~l~~~~l~~--~i~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
..+.++++++++.++++.+ .++.|+++++++|++.+++++.. |++++
T Consensus 315 ~~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 365 (365)
T cd08278 315 SVPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR 365 (365)
T ss_pred cChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence 2355688889999998854 34789999999999999987764 88774
No 40
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=2.4e-42 Score=325.15 Aligned_cols=339 Identities=18% Similarity=0.224 Sum_probs=277.8
Q ss_pred CCCcccceeEEec--cC-CCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC----------CCCCCCcccc
Q 018158 5 TPNHTQSVVGWAA--HD-PSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG----------ITMYPVVPGH 71 (360)
Q Consensus 5 ~~~~~~~~~~~~~--~~-~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~----------~~~~p~~~G~ 71 (360)
+|.+ |+++++.. ++ +.+.+++++++.|+++++||+||+.++++|++|++.+.+... ....+.++||
T Consensus 9 ~~~~-~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~ 87 (393)
T cd08246 9 VPEK-MYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGS 87 (393)
T ss_pred Cchh-hhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcccccc
Confidence 6888 56665542 23 234689999999999999999999999999999988776411 0112358899
Q ss_pred ccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEEC
Q 018158 72 EITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151 (360)
Q Consensus 72 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~i 151 (360)
|++|+|+++|++++.|++||+|++.+. ..|+.|..|..+..++|.... +.|+. ...|+|++|+.++.+.++++
T Consensus 88 e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~~~~~~--~~g~~----~~~g~~a~y~~v~~~~l~~i 160 (393)
T cd08246 88 DASGIVWAVGEGVKNWKVGDEVVVHCS-VWDGNDPERAGGDPMFDPSQR--IWGYE----TNYGSFAQFALVQATQLMPK 160 (393)
T ss_pred ceEEEEEEeCCCCCcCCCCCEEEEecc-ccccCcccccccccccccccc--ccccc----CCCCcceeEEEechHHeEEC
Confidence 999999999999999999999987654 468899999999999998632 22321 35699999999999999999
Q ss_pred CCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC
Q 018158 152 PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA 230 (360)
Q Consensus 152 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~ 230 (360)
|+++++++++.+++.+.|||+++.......++++++++|+|+ |++|++++++|+.+|++++++++++++++.+++ +|+
T Consensus 161 P~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~-~G~ 239 (393)
T cd08246 161 PKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRA-LGA 239 (393)
T ss_pred CCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-cCC
Confidence 999999999999999999999987652112449999999998 999999999999999999999999999999988 999
Q ss_pred CeEeeCccHH-------------------------HHHhc--CC-CcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 231 DEFILSTNAM-------------------------QMQAG--KR-TLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 231 ~~~v~~~~~~-------------------------~~~~~--~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+++++.++.+ ..... +. ++|++||++|.. .+..++++++++|+++.+|...
T Consensus 240 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~ 318 (393)
T cd08246 240 EGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFVCDRGGMVVICAGTT 318 (393)
T ss_pred CEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHHhccCCEEEEEcccC
Confidence 9888764321 11111 34 799999999874 6789999999999999998654
Q ss_pred C-CcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcC-CCceeEEEe
Q 018158 283 A-PFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARN-DVRYRFVID 353 (360)
Q Consensus 283 ~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~-~~~gkvvi~ 353 (360)
. ...+....+..++.++.++....++++..+++++.++.+.+.+ ++|+++++++|++.+.++ +..||+++.
T Consensus 319 ~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 319 GYNHTYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred CCCCCCcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence 3 2344556677788889988877778899999999999998655 899999999999999998 788999874
No 41
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.1e-41 Score=319.47 Aligned_cols=337 Identities=20% Similarity=0.275 Sum_probs=273.7
Q ss_pred cceeEEeccCCCCCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+|+++. +++.+++++++.|.| .+++|+||+.++++|++|++.+.|.++..++|.++|||++|+|+++|++++.|+
T Consensus 1 m~a~~~~---~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 77 (386)
T cd08283 1 MKALVWH---GKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLK 77 (386)
T ss_pred CeeEEEe---cCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCC
Confidence 4555553 457899999999988 599999999999999999999999876556788999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccc--c--------ccccCC---CccccceeeEEEeecc--eeEECCC
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTY--N--------GIFWDG---SITYGGYSEMLVADYR--FVVHVPE 153 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~--~--------g~~~~~---~~~~g~~~~~~~v~~~--~~~~iP~ 153 (360)
+||+|++.+.. .|++|.+|..+.+++|++..... . |+.-.+ ....|+|++|+.++.+ .++++|+
T Consensus 78 ~Gd~V~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~ 156 (386)
T cd08283 78 VGDRVVVPFTI-ACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPD 156 (386)
T ss_pred CCCEEEEcCcC-CCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCC
Confidence 99999876554 69999999999999999743221 0 110000 0136999999999988 8999999
Q ss_pred CCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCe
Q 018158 154 NIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADE 232 (360)
Q Consensus 154 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~ 232 (360)
+++++++++++..+.+||+++ ....+. ++++|+|+|+|++|++++++|+.+|+ +|+++++++++.+.+++ ++...
T Consensus 157 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~--~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~-~~~~~ 232 (386)
T cd08283 157 DLSDEKALFLSDILPTGYHAA-ELAEVK--PGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARS-HLGAE 232 (386)
T ss_pred CCCHHHHhhhccchhhhHHHH-hhccCC--CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCCcE
Confidence 999999999999999999999 555544 99999999889999999999999998 59999999999999998 74446
Q ss_pred EeeCccHH-H---HHhc--CCCcCEEEEcCCCc---------------------ccHHHHHHHhccCCEEEEeCCCCC-C
Q 018158 233 FILSTNAM-Q---MQAG--KRTLDFILDTVSAK---------------------HSLGPILELLKVNGTLSVVGAPEA-P 284 (360)
Q Consensus 233 ~v~~~~~~-~---~~~~--~~~~d~vid~~g~~---------------------~~~~~~~~~l~~~G~~v~~g~~~~-~ 284 (360)
++++.+.+ . .... ++++|++||++|+. ..+..++++++++|+++.+|.... .
T Consensus 233 vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~ 312 (386)
T cd08283 233 TINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTV 312 (386)
T ss_pred EEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCc
Confidence 66665432 2 2222 35799999999753 256889999999999999987654 2
Q ss_pred cccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCC-CceeEEEec
Q 018158 285 FELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARND-VRYRFVIDI 354 (360)
Q Consensus 285 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~-~~gkvvi~~ 354 (360)
..++...++.+++++.++.....+.++.+++++.++++.+ .+ +.|+++++++|++.+.+++ ..+|+++++
T Consensus 313 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 313 NKFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred CccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 3344445678888988876666677899999999999876 24 8999999999999998877 458999863
No 42
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=3.7e-42 Score=315.79 Aligned_cols=303 Identities=19% Similarity=0.238 Sum_probs=248.4
Q ss_pred cceeEEeccCCC---CCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCC
Q 018158 10 QSVVGWAAHDPS---GKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVK 85 (360)
Q Consensus 10 ~~~~~~~~~~~~---~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~ 85 (360)
|++.++...+++ ..++++++|.|.|+++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 455666555544 57889999999999999999999999999999999887642 35688999999999999999999
Q ss_pred C-CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcccccccc
Q 018158 86 N-FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLL 164 (360)
Q Consensus 86 ~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~ 164 (360)
+ |++||+|++.+ ..+|+|++|+.++++.++++|++++++++++++
T Consensus 81 ~~~~vGd~V~~~~----------------------------------~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~ 126 (324)
T cd08291 81 AQSLIGKRVAFLA----------------------------------GSYGTYAEYAVADAQQCLPLPDGVSFEQGASSF 126 (324)
T ss_pred ccCCCCCEEEecC----------------------------------CCCCcchheeeecHHHeEECCCCCCHHHHhhhc
Confidence 6 99999998521 114999999999999999999999999999999
Q ss_pred chhhhhhchhhccCCCCCCCCcEEEEE-cC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH
Q 018158 165 CAGITVFCPMKDNNLIDSPAKKRIGIV-GL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM 242 (360)
Q Consensus 165 ~~~~ta~~~l~~~~~~~~~~~~~vlI~-Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 242 (360)
+.+.|||.++.... . ++++++|+ |+ |++|++++|+|+.+|++|+++++++++++.+++ +|+++++++++.+..
T Consensus 127 ~~~~ta~~~~~~~~---~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~ 201 (324)
T cd08291 127 VNPLTALGMLETAR---E-EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-IGAEYVLNSSDPDFL 201 (324)
T ss_pred ccHHHHHHHHHhhc---c-CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEECCCccHH
Confidence 99999986554332 2 45556554 55 999999999999999999999999999999998 999999987764322
Q ss_pred ---Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-c-ccChhhHhccCcEEEEeecCC------HHH
Q 018158 243 ---QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-F-ELPSFPLIFGKRSVKGSMTGG------MRE 309 (360)
Q Consensus 243 ---~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-~~~~~~~~~~~~~i~~~~~~~------~~~ 309 (360)
... ++++|++||++|... ....+++++++|+++.+|..... . .++...++.+++++.++.... .++
T Consensus 202 ~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (324)
T cd08291 202 EDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEV 280 (324)
T ss_pred HHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHH
Confidence 222 468999999999874 57789999999999999875432 2 244556677899998876532 356
Q ss_pred HHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 310 TQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 310 ~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
++.+++++. +.+++.+ ++|+|+++++|++.+.+++..||+++.
T Consensus 281 ~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 281 VKKLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHHHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 788888887 8898877 899999999999999999989999873
No 43
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=2.1e-41 Score=314.17 Aligned_cols=326 Identities=27% Similarity=0.426 Sum_probs=275.6
Q ss_pred cCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC------------CCCCCCccccccceEEEEecCCCC
Q 018158 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG------------ITMYPVVPGHEITGIITKVGSNVK 85 (360)
Q Consensus 18 ~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~------------~~~~p~~~G~e~~G~V~~vG~~v~ 85 (360)
..+...++++++|.|+++++||+||+.++++|++|++.+.|.++ ...+|.++|||++|+|+++|++++
T Consensus 7 ~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~ 86 (350)
T cd08240 7 VEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVGPDAA 86 (350)
T ss_pred ccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEeeCCCCC
Confidence 34445689999999999999999999999999999999887543 123467899999999999999999
Q ss_pred CCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccc
Q 018158 86 NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLC 165 (360)
Q Consensus 86 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~ 165 (360)
.+++||+|++.+.. .|++|..|.++.+++|....+ .|+ ...|++++|+.++.+.++++|+++++.+++.+++
T Consensus 87 ~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~ 158 (350)
T cd08240 87 DVKVGDKVLVYPWI-GCGECPVCLAGDENLCAKGRA--LGI-----FQDGGYAEYVIVPHSRYLVDPGGLDPALAATLAC 158 (350)
T ss_pred CCCCCCEEEECCcC-CCCCChHHHCcCcccCCCCCc--eee-----eccCcceeeEEecHHHeeeCCCCCCHHHeehhhc
Confidence 99999999886655 899999999999999976321 121 3568999999999999999999999999999999
Q ss_pred hhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---
Q 018158 166 AGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ--- 241 (360)
Q Consensus 166 ~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~--- 241 (360)
.+.+||+++....... ++++++|+|+|++|++++|+|+.+|+ +|+++++++++++.+++ +|++.+++.++.+.
T Consensus 159 ~~~tA~~~~~~~~~~~--~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~ 235 (350)
T cd08240 159 SGLTAYSAVKKLMPLV--ADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA-AGADVVVNGSDPDAAKR 235 (350)
T ss_pred hhhhHHHHHHhcccCC--CCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-hCCcEEecCCCccHHHH
Confidence 9999999998877654 89999999889999999999999999 69999999999999977 99988887765422
Q ss_pred HHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcC
Q 018158 242 MQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKY 320 (360)
Q Consensus 242 ~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 320 (360)
.... ++++|++||++|....+..++++|+++|+++.+|............+..++.++.++.....+++..++++++++
T Consensus 236 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~~ 315 (350)
T cd08240 236 IIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKAG 315 (350)
T ss_pred HHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHcC
Confidence 2222 338999999999766789999999999999999876544344444455688899888877778899999999999
Q ss_pred CCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 321 NITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 321 ~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.+++.. +.|+++++++|++.+.+++..||+++++
T Consensus 316 ~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 316 KLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred CCccceeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence 987654 8999999999999999998889999853
No 44
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.5e-41 Score=314.07 Aligned_cols=314 Identities=18% Similarity=0.166 Sum_probs=249.7
Q ss_pred CCCCCCCcccceeEEecc----CCCCCceEEEE---eCC-CCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCcccc-
Q 018158 1 MAQTTPNHTQSVVGWAAH----DPSGKITPYIF---KRR-ENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGH- 71 (360)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~---~~p-~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~- 71 (360)
||..-+.+ .+.+.+..+ -....|++++. +.| ++++||||||+.++++|+.|...+.+......+|.++|+
T Consensus 1 ~~~~~~~~-~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~ 79 (348)
T PLN03154 1 MMEGQVVE-NKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQR 79 (348)
T ss_pred CCCCcccc-ceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCe
Confidence 77776666 343333222 12236777773 555 358999999999999999988654432222345788998
Q ss_pred -ccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecce--e
Q 018158 72 -EITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRF--V 148 (360)
Q Consensus 72 -e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~--~ 148 (360)
|++|+|+.+|+++++|++||+|+. .|+|+||+.++.+. +
T Consensus 80 ~~~~G~v~~vg~~v~~~~~Gd~V~~--------------------------------------~~~~aey~~v~~~~~~~ 121 (348)
T PLN03154 80 IEGFGVSKVVDSDDPNFKPGDLISG--------------------------------------ITGWEEYSLIRSSDNQL 121 (348)
T ss_pred eEeeEEEEEEecCCCCCCCCCEEEe--------------------------------------cCCcEEEEEEeccccce
Confidence 889999999999999999999974 26899999998753 5
Q ss_pred EE--CCCCCCcc-ccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 018158 149 VH--VPENIAMD-AAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEA 224 (360)
Q Consensus 149 ~~--iP~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~ 224 (360)
++ +|++++++ +++++++++.|||+++.....++ +|++|+|+|+ |++|++++|+||.+|++|+++++++++++.+
T Consensus 122 ~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~--~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~ 199 (348)
T PLN03154 122 RKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPK--KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL 199 (348)
T ss_pred EEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCC--CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 44 59999986 68899999999999997766655 9999999999 9999999999999999999999999999998
Q ss_pred HHHcCCCeEeeCccH-H---HHHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cc-----cChhhHh
Q 018158 225 KELLGADEFILSTNA-M---QMQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FE-----LPSFPLI 293 (360)
Q Consensus 225 ~~~~g~~~~v~~~~~-~---~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-----~~~~~~~ 293 (360)
++.+|+++++++++. + ..... ++++|++||++|.. .+..++++++++|+++.+|...+. .. .+...++
T Consensus 200 ~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~ 278 (348)
T PLN03154 200 KNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLI 278 (348)
T ss_pred HHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHh
Confidence 734999999988642 1 12222 45899999999975 679999999999999999976432 11 2445577
Q ss_pred ccCcEEEEeecCC-----HHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEecCC
Q 018158 294 FGKRSVKGSMTGG-----MRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIAG 356 (360)
Q Consensus 294 ~~~~~i~~~~~~~-----~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 356 (360)
.+++++.++.... .+.++++++++++|++++.+ ++|+|+++++|++.+++++..||+|+++++
T Consensus 279 ~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~ 347 (348)
T PLN03154 279 SKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAK 347 (348)
T ss_pred hccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEecC
Confidence 8889999886542 24577899999999999887 689999999999999999999999999854
No 45
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=4.7e-41 Score=311.49 Aligned_cols=325 Identities=22% Similarity=0.311 Sum_probs=269.3
Q ss_pred CCCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCc
Q 018158 21 SGKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLA 99 (360)
Q Consensus 21 ~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 99 (360)
++.+.+.+.|.|.| .++||+||+.++++|++|++.+.|.++..++|.++|+|++|+|+++|++++.|++||+|++. ..
T Consensus 9 ~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-~~ 87 (347)
T cd05278 9 PGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVP-CI 87 (347)
T ss_pred CCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCCCEEEec-CC
Confidence 45689999999999 99999999999999999999998887656678899999999999999999999999999875 55
Q ss_pred cCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc--eeEECCCCCCccccccccchhhhhhchhhcc
Q 018158 100 AACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR--FVVHVPENIAMDAAAPLLCAGITVFCPMKDN 177 (360)
Q Consensus 100 ~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~ 177 (360)
..|+.|.+|..|++++|.+..++..+ +...+|+|++|+.++.+ .++++|+++++++++.+++.+.|||+++ ..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~ 162 (347)
T cd05278 88 TFCGRCRFCRRGYHAHCENGLWGWKL----GNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-EL 162 (347)
T ss_pred CCCCCChhHhCcCcccCcCCCccccc----ccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hh
Confidence 68999999999999999885443321 12356999999999987 8999999999999999999999999998 44
Q ss_pred CCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hhc--CCCcCE
Q 018158 178 NLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QAG--KRTLDF 251 (360)
Q Consensus 178 ~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~--~~~~d~ 251 (360)
.++ +++++|+|.|+|.+|++++|+|+.+|+ +|+++++++++.+.+++ +|+++++++++.+.. ... ++++|+
T Consensus 163 ~~~--~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~i~~~~~~~~~d~ 239 (347)
T cd05278 163 AGI--KPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKE-AGATDIINPKNGDIVEQILELTGGRGVDC 239 (347)
T ss_pred cCC--CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-hCCcEEEcCCcchHHHHHHHHcCCCCCcE
Confidence 454 499999998779999999999999997 89899888888888887 999999887765322 222 467999
Q ss_pred EEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCccc-ChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccc---eE
Q 018158 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFEL-PSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCN---IE 327 (360)
Q Consensus 252 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~---i~ 327 (360)
+||++|....+..++++++++|+++.+|........ .....+.+++++.++.....+.++++++++.++.+++. +.
T Consensus 240 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 319 (347)
T cd05278 240 VIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDPSKLITH 319 (347)
T ss_pred EEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCChhHcEEE
Confidence 999998755689999999999999999865433211 11223456777777655556778999999999998763 37
Q ss_pred EECCccHHHHHHHHHcCCC-ceeEEEec
Q 018158 328 VIKPDQINEALDRLARNDV-RYRFVIDI 354 (360)
Q Consensus 328 ~~~~~~~~~a~~~~~~~~~-~gkvvi~~ 354 (360)
.|+++++++|++.+.+++. .+|+++++
T Consensus 320 ~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 320 RFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred EecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 8999999999999988877 68998763
No 46
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=6.5e-41 Score=309.81 Aligned_cols=333 Identities=30% Similarity=0.535 Sum_probs=284.1
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+|+++...+ +..+++++.+.|.+.++|++||+.++++|++|..++.|.++. ...+.++|||++|+|+++|++++.|+
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~ 79 (341)
T cd08297 1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLK 79 (341)
T ss_pred CceEEeeccC-CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCC
Confidence 5666665444 468999999999999999999999999999999998887642 33466789999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.+....|+.|.+|..++.++|....+. +....|++++|+.++.+.++++|+++++++++.++..+.
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ 152 (341)
T cd08297 80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS-------GYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGV 152 (341)
T ss_pred CCCEEEEecCCCCCCCCccccCCCcccCCCcccc-------ccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchH
Confidence 9999998877788999999999999999774221 223468999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHh
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~ 244 (360)
|||+++... . ++++++++|+|+ +.+|++++++|+.+|++|+++++++++.+.+++ +|++.++++.+.+. ...
T Consensus 153 ta~~~~~~~-~--~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~ 228 (341)
T cd08297 153 TVYKALKKA-G--LKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKE-LGADAFVDFKKSDDVEAVKE 228 (341)
T ss_pred HHHHHHHhc-C--CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-cCCcEEEcCCCccHHHHHHH
Confidence 999998775 3 459999999999 779999999999999999999999999998877 99998888776422 222
Q ss_pred c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCC
Q 018158 245 G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYN 321 (360)
Q Consensus 245 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~ 321 (360)
. ++++|+++|+.+....+..++++++++|+++.+|..... .++....+..++.++.+......++++.+++++.++.
T Consensus 229 ~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (341)
T cd08297 229 LTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGK 308 (341)
T ss_pred HhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCC
Confidence 2 568999999887766789999999999999999876532 2455556668889998877766788999999999999
Q ss_pred CccceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 322 ITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 322 l~~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++.++.|++++++++++.+.++...||+++++
T Consensus 309 l~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 309 VKPHIQVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred CcceeEEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 987678899999999999999998889999875
No 47
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=2.4e-41 Score=318.61 Aligned_cols=343 Identities=17% Similarity=0.263 Sum_probs=283.0
Q ss_pred CCCCcccceeEEec--cC-CCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC----------CCCCC-Ccc
Q 018158 4 TTPNHTQSVVGWAA--HD-PSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG----------ITMYP-VVP 69 (360)
Q Consensus 4 ~~~~~~~~~~~~~~--~~-~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~----------~~~~p-~~~ 69 (360)
-+|++ |+|.++.. ++ +++.+.+.+++.|.|.++||+||++++++|++|++...+... ....| .++
T Consensus 3 ~~~~~-~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 81 (398)
T TIGR01751 3 VVPET-MYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHII 81 (398)
T ss_pred ccchh-hhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceec
Confidence 35767 78888754 43 457899999999999999999999999999999887655321 11223 379
Q ss_pred ccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeE
Q 018158 70 GHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVV 149 (360)
Q Consensus 70 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~ 149 (360)
|||++|+|+++|++++.|++||+|++.+ ...|++|.+|..|..++|....+ .|.. ...|+|++|+.++++.++
T Consensus 82 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~g~~----~~~g~~ae~~~v~~~~~~ 154 (398)
T TIGR01751 82 GSDASGVVWRVGPGVTRWKVGDEVVASC-LQVDLTAPDGRVGDPMLSSEQRI--WGYE----TNFGSFAEFALVKDYQLM 154 (398)
T ss_pred ccceEEEEEEeCCCCCCCCCCCEEEEcc-ccccCCchhhccCcccccccccc--cccc----CCCccceEEEEechHHeE
Confidence 9999999999999999999999998764 45789999999999999976421 1111 246899999999999999
Q ss_pred ECCCCCCccccccccchhhhhhchhhc--cCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH
Q 018158 150 HVPENIAMDAAAPLLCAGITVFCPMKD--NNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKE 226 (360)
Q Consensus 150 ~iP~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~ 226 (360)
++|+++++++++.+.+.+.+||+++.. ... +.++++++|+|+ |++|++++|+|+.+|++++++++++++++.+++
T Consensus 155 ~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~--~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~ 232 (398)
T TIGR01751 155 PKPKHLTWEEAACPGLTGATAYRQLVGWNPAT--VKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRE 232 (398)
T ss_pred ECCCCCCHHHHhhccchHHHHHHHHhhhhccC--CCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH
Confidence 999999999999999999999999865 233 449999999999 999999999999999999988889999999988
Q ss_pred HcCCCeEeeCccHH----------------------H---HHhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeC
Q 018158 227 LLGADEFILSTNAM----------------------Q---MQAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 227 ~~g~~~~v~~~~~~----------------------~---~~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 279 (360)
+|++.++|+++.+ . .... ++++|++|||+|.. .+..++++++++|+++.+|
T Consensus 233 -~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g 310 (398)
T TIGR01751 233 -LGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVFVCRRGGMVVICG 310 (398)
T ss_pred -cCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHhhccCCEEEEEc
Confidence 9999999865421 0 1111 46799999999874 5789999999999999999
Q ss_pred CCCC-CcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEecCCC
Q 018158 280 APEA-PFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIAGG 357 (360)
Q Consensus 280 ~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~ 357 (360)
.... ...++...+..++.++.++.....++++.+++++.++.+.+.+ +++++++++++++.+.+++..||+|+++..+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~ 390 (398)
T TIGR01751 311 GTTGYNHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLAP 390 (398)
T ss_pred cccCCCCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeCCC
Confidence 7653 2445556666778888888777777788999999999998765 8999999999999999999999999998765
Q ss_pred c
Q 018158 358 A 358 (360)
Q Consensus 358 ~ 358 (360)
.
T Consensus 391 ~ 391 (398)
T TIGR01751 391 R 391 (398)
T ss_pred C
Confidence 3
No 48
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=6.5e-41 Score=310.29 Aligned_cols=331 Identities=21% Similarity=0.333 Sum_probs=279.0
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|||.++..++ ..+++++.+.|.+.+++|+||+.++++|++|+....|.++...+|.++|+|++|+|+++|+++..|++
T Consensus 1 m~a~~~~~~~--~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~ 78 (345)
T cd08260 1 MRAAVYEEFG--EPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRV 78 (345)
T ss_pred CeeEEEecCC--CCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCC
Confidence 4555554333 45899999999999999999999999999999999887655566889999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc--eeEECCCCCCccccccccchh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR--FVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~aa~l~~~~ 167 (360)
||+|++ ++...|+.|.+|..|..++|....+ . +....|+|++|+.++.. .++++|+++++++++.++..+
T Consensus 79 Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~ 150 (345)
T cd08260 79 GDRVTV-PFVLGCGTCPYCRAGDSNVCEHQVQ--P-----GFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRF 150 (345)
T ss_pred CCEEEE-CCCCCCCCCccccCcCcccCCCCcc--c-----ccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccch
Confidence 999988 5556899999999999999997432 1 11346999999999974 899999999999999999999
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc-HHHH---H
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN-AMQM---Q 243 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~~~~---~ 243 (360)
.+||+++.....+. ++++++|+|+|++|++++|+|+..|++|+++++++++.+.+++ +|+++++++++ .+.. .
T Consensus 151 ~ta~~~l~~~~~~~--~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~ 227 (345)
T cd08260 151 ATAFRALVHQARVK--PGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELARE-LGAVATVNASEVEDVAAAVR 227 (345)
T ss_pred HHHHHHHHHccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-hCCCEEEccccchhHHHHHH
Confidence 99999987666554 9999999999999999999999999999999999999999987 99999998776 3222 1
Q ss_pred hc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC---cccChhhHhccCcEEEEeecCCHHHHHHHHHHHhc
Q 018158 244 AG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP---FELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGK 319 (360)
Q Consensus 244 ~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ 319 (360)
.. ..++|++||++|....+...+++++++|+++.+|..... ..++...+..+++++.++.....+.++.+++++++
T Consensus 228 ~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 307 (345)
T cd08260 228 DLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIAS 307 (345)
T ss_pred HHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHc
Confidence 12 237999999998755678999999999999999976432 34455556678889998877777889999999999
Q ss_pred CCCccc--e-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 320 YNITCN--I-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 320 ~~l~~~--i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+.+.+. + +.++++++++|++.+++++..||+|++
T Consensus 308 ~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 308 GKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred CCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 988652 3 899999999999999999988998864
No 49
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.9e-41 Score=310.38 Aligned_cols=328 Identities=24% Similarity=0.378 Sum_probs=274.9
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+++.+ ..+...++++++|.|.+.++|++||++++++|++|++...|.++...+|.++|||++|+|+++|++++.+++
T Consensus 1 m~a~~~--~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 78 (334)
T PRK13771 1 MKAVIL--PGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKP 78 (334)
T ss_pred CeeEEE--cCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCC
Confidence 344443 344346999999999999999999999999999999988887655566788999999999999999989999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|++.+. ..|+.|.+|..|.++.|.+..+ .+....|+|++|+.++.+.++++|+++++.+++.+++.+.+
T Consensus 79 G~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~ 150 (334)
T PRK13771 79 GDRVASLLY-APDGTCEYCRSGEEAYCKNRLG-------YGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGM 150 (334)
T ss_pred CCEEEECCC-CCCcCChhhcCCCcccCccccc-------cccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHH
Confidence 999988655 5899999999999999987432 12245799999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH-HHHHhcCC
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA-MQMQAGKR 247 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~~~~~~~ 247 (360)
||+++... .. .++++++|+|+ |.+|++++|+|+.+|++|+++++++++++.+++ + ++++++..+. ...... .
T Consensus 151 a~~~~~~~-~~--~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~v~~~-~ 224 (334)
T PRK13771 151 VYRGLRRA-GV--KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSK-Y-ADYVIVGSKFSEEVKKI-G 224 (334)
T ss_pred HHHHHHhc-CC--CCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-H-HHHhcCchhHHHHHHhc-C
Confidence 99999877 54 49999999999 999999999999999999999999999998877 7 7666665522 122223 3
Q ss_pred CcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCc--ccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccc
Q 018158 248 TLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPF--ELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCN 325 (360)
Q Consensus 248 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~ 325 (360)
++|+++||+|+. ....++++++++|+++.+|...... .......+.+++++.+.....+++++.+++++.++.+++.
T Consensus 225 ~~d~~ld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 303 (334)
T PRK13771 225 GADIVIETVGTP-TLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPV 303 (334)
T ss_pred CCcEEEEcCChH-HHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCcce
Confidence 799999999986 5789999999999999999764322 2334444567888888766677889999999999999865
Q ss_pred e-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 326 I-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 326 i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+ +.|+++++++|++.++++...||+++++
T Consensus 304 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 304 IGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred EeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 5 8999999999999999988889999864
No 50
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=4.8e-41 Score=313.11 Aligned_cols=328 Identities=22% Similarity=0.369 Sum_probs=270.2
Q ss_pred cCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEecc
Q 018158 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97 (360)
Q Consensus 18 ~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 97 (360)
...++++++++++.|++.+++|+||+.++++|++|++.+.|.+ ...+|.++|||++|+|+++|++++.+++||+|++.+
T Consensus 7 ~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~-~~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~ 85 (365)
T cd05279 7 WEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKL-PTPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLF 85 (365)
T ss_pred ecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCC-CCCCCcccccceeEEEEEeCCCcccCCCCCEEEEcC
Confidence 4455679999999999999999999999999999999998876 345678999999999999999999999999998865
Q ss_pred CccCCCCChhhhCCCCCCccccccc-ccccccCC-------------CccccceeeEEEeecceeEECCCCCCccccccc
Q 018158 98 LAAACMECEFCKDSQENYCDKIQFT-YNGIFWDG-------------SITYGGYSEMLVADYRFVVHVPENIAMDAAAPL 163 (360)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~~~~-------------~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l 163 (360)
. ..|+.|.+|..+.+++|+...+. ..|....| ....|+|++|+.++++.++++|+++++++++.+
T Consensus 86 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~ 164 (365)
T cd05279 86 G-PQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLI 164 (365)
T ss_pred C-CCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHHhhHh
Confidence 4 58999999999999999885433 23322111 113479999999999999999999999999999
Q ss_pred cchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccH--H
Q 018158 164 LCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNA--M 240 (360)
Q Consensus 164 ~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~ 240 (360)
++++.+||+++.....+. +|++++|+|+|++|++++|+|+.+|++ |+++++++++++.+++ +|++++++..+. +
T Consensus 165 ~~~~~ta~~al~~~~~~~--~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~v~~~~~~~~ 241 (365)
T cd05279 165 GCGFSTGYGAAVNTAKVT--PGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQ-LGATECINPRDQDKP 241 (365)
T ss_pred ccchhHHHHHHHhccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-hCCCeecccccccch
Confidence 999999999887666655 999999998899999999999999996 7788889999999977 999988876553 2
Q ss_pred H---HHh-cCCCcCEEEEcCCCcccHHHHHHHhc-cCCEEEEeCCCC--CCcccChhhHhccCcEEEEeec---CCHHHH
Q 018158 241 Q---MQA-GKRTLDFILDTVSAKHSLGPILELLK-VNGTLSVVGAPE--APFELPSFPLIFGKRSVKGSMT---GGMRET 310 (360)
Q Consensus 241 ~---~~~-~~~~~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~---~~~~~~ 310 (360)
. ... .++++|++||++|....+..++++++ ++|+++.+|... ....++...+ .++.++.++.. ...+.+
T Consensus 242 ~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~ 320 (365)
T cd05279 242 IVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGWKSKDSV 320 (365)
T ss_pred HHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCCchHhHH
Confidence 1 111 25689999999987667889999999 999999998754 3455556566 67778877643 345678
Q ss_pred HHHHHHHhcCCCcc---ceEEECCccHHHHHHHHHcCCCceeEEE
Q 018158 311 QEMMNVCGKYNITC---NIEVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 311 ~~~~~~l~~~~l~~---~i~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
..+++++.++.+++ .+++|+++++++|++.+.+++.. |+++
T Consensus 321 ~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 321 PKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred HHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 89999999998864 24899999999999999887654 7665
No 51
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=1.8e-40 Score=305.49 Aligned_cols=323 Identities=41% Similarity=0.732 Sum_probs=276.3
Q ss_pred CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccC
Q 018158 19 DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCL 98 (360)
Q Consensus 19 ~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 98 (360)
+..+.+++++.+.|.+.+++|+|++.++++|++|++.+.|.+....+|.++|||++|+|+++|+++++|++||+|++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~ 86 (330)
T cd08245 7 AAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWL 86 (330)
T ss_pred cCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCEEEEccc
Confidence 44368999999999999999999999999999999999887644456788999999999999999999999999988777
Q ss_pred ccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccC
Q 018158 99 AAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNN 178 (360)
Q Consensus 99 ~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~ 178 (360)
..+|+.|.+|.++.++.|.+..+... ...|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~~- 158 (330)
T cd08245 87 VGSCGRCEYCRRGLENLCQKAVNTGY-------TTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDA- 158 (330)
T ss_pred cCCCCCChhhhCcCcccCcCccccCc-------ccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHhh-
Confidence 67899999999999999998544221 2468999999999999999999999999999999999999998764
Q ss_pred CCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 179 LIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 179 ~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
. ++++++++|+|+|.+|++++++|+.+|++|+++++++++.+.+++ +|++.+++...........+++|+++|+++.
T Consensus 159 ~--~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~d~vi~~~~~ 235 (330)
T cd08245 159 G--PRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKRELARK-LGADEVVDSGAELDEQAAAGGADVILVTVVS 235 (330)
T ss_pred C--CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hCCcEEeccCCcchHHhccCCCCEEEECCCc
Confidence 3 459999999988889999999999999999999999999999977 9988888765543322233579999999887
Q ss_pred cccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccceEEECCccHHHH
Q 018158 259 KHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEA 337 (360)
Q Consensus 259 ~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~a 337 (360)
......++++++++|+++.+|..... .......++.++.++.++.......++.+++++.++.+.+.++.|++++++++
T Consensus 236 ~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~a 315 (330)
T cd08245 236 GAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKPMIETFPLDQANEA 315 (330)
T ss_pred HHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcceEEEEcHHHHHHH
Confidence 66788999999999999999865432 22224456778889988888777889999999999999876689999999999
Q ss_pred HHHHHcCCCceeEEE
Q 018158 338 LDRLARNDVRYRFVI 352 (360)
Q Consensus 338 ~~~~~~~~~~gkvvi 352 (360)
++.+.+++..||+|+
T Consensus 316 ~~~~~~~~~~~~~v~ 330 (330)
T cd08245 316 YERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHcCCCCcceeC
Confidence 999999998888874
No 52
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=3.1e-40 Score=303.82 Aligned_cols=314 Identities=30% Similarity=0.525 Sum_probs=269.1
Q ss_pred CCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccC
Q 018158 22 GKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAA 101 (360)
Q Consensus 22 ~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 101 (360)
+.+.+++.+.|.+.++||+||+.++++|++|++.+.|.++....|.++|||++|+|+++|+++.+|++||+|++.+....
T Consensus 15 ~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 94 (329)
T cd08298 15 NPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGST 94 (329)
T ss_pred CCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCC
Confidence 47888888888899999999999999999999999887654556789999999999999999999999999988777778
Q ss_pred CCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCC
Q 018158 102 CMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLID 181 (360)
Q Consensus 102 ~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~ 181 (360)
|+.|.+|..+..++|....+. | ...+|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++ ...+++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~--~-----~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~ 166 (329)
T cd08298 95 CGECRYCRSGRENLCDNARFT--G-----YTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLK 166 (329)
T ss_pred CCCChhHhCcChhhCCCcccc--c-----cccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCC
Confidence 999999999999999875432 2 23468999999999999999999999999999999999999998 555555
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
++++++|+|+|++|++++++++..|++|+++++++++++.+++ +|++.+++.... .++++|+++++.+....
T Consensus 167 --~~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~-----~~~~vD~vi~~~~~~~~ 238 (329)
T cd08298 167 --PGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELARE-LGADWAGDSDDL-----PPEPLDAAIIFAPVGAL 238 (329)
T ss_pred --CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHH-hCCcEEeccCcc-----CCCcccEEEEcCCcHHH
Confidence 9999999988999999999999999999999999999999977 999887776543 24579999998776667
Q ss_pred HHHHHHHhccCCEEEEeCCCCCCc-ccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccceEEECCccHHHHHHH
Q 018158 262 LGPILELLKVNGTLSVVGAPEAPF-ELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDR 340 (360)
Q Consensus 262 ~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~a~~~ 340 (360)
+..++++++++|+++.+|...... .++.. .+.++..+.++.....+.++.+++++.++.+++.++.|+++++++|++.
T Consensus 239 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~a~~~ 317 (329)
T cd08298 239 VPAALRAVKKGGRVVLAGIHMSDIPAFDYE-LLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPEVETYPLEEANEALQD 317 (329)
T ss_pred HHHHHHHhhcCCEEEEEcCCCCCCCccchh-hhhCceEEEEecCCCHHHHHHHHHHHHcCCCCceEEEEeHHHHHHHHHH
Confidence 899999999999999988543222 12222 2456777877777777888999999999998876789999999999999
Q ss_pred HHcCCCceeEEE
Q 018158 341 LARNDVRYRFVI 352 (360)
Q Consensus 341 ~~~~~~~gkvvi 352 (360)
+++++..||+++
T Consensus 318 ~~~~~~~~~~v~ 329 (329)
T cd08298 318 LKEGRIRGAAVL 329 (329)
T ss_pred HHcCCCcceeeC
Confidence 999998899874
No 53
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=4.8e-40 Score=306.31 Aligned_cols=335 Identities=22% Similarity=0.377 Sum_probs=273.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+|+.+... .+.+++++++.|+++++||+||+.++++|+.|+.++.|.++ ..+|.++|+|++|+|+++|++++.|++
T Consensus 1 m~a~~~~~~--~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~ 77 (363)
T cd08279 1 MRAAVLHEV--GKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKP 77 (363)
T ss_pred CeEEEEecC--CCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCC
Confidence 455555433 35789999999999999999999999999999999888763 456778999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCccccccccc-------------ccccCCCccccceeeEEEeecceeEECCCCCC
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYN-------------GIFWDGSITYGGYSEMLVADYRFVVHVPENIA 156 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~-------------g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~ 156 (360)
||+|++.+ ..+|++|.+|.+++.+.|.+..++-. |.........|+|++|+.++.+.++++|++++
T Consensus 78 Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~ 156 (363)
T cd08279 78 GDHVVLSW-IPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP 156 (363)
T ss_pred CCEEEECC-CCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence 99998764 45999999999999999987533211 11111123468999999999999999999999
Q ss_pred ccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEee
Q 018158 157 MDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 157 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
+++++.+++.+.+||.++.....+. ++++++|+|+|.+|++++++|+.+|++ |+++++++++.+.+++ +|++++++
T Consensus 157 ~~~aa~~~~~~~ta~~~~~~~~~~~--~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~-~g~~~vv~ 233 (363)
T cd08279 157 LDRAALLGCGVTTGVGAVVNTARVR--PGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARR-FGATHTVN 233 (363)
T ss_pred hHHeehhcchhHHHHHHHHhccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH-hCCeEEeC
Confidence 9999999999999999987766655 999999997799999999999999996 9999999999988877 99988887
Q ss_pred CccHHH---HHhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC--CCcccChhhHhccCcEEEEeec---C
Q 018158 236 STNAMQ---MQAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE--APFELPSFPLIFGKRSVKGSMT---G 305 (360)
Q Consensus 236 ~~~~~~---~~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~---~ 305 (360)
.+.... .... ++++|+++|+++....+..++++++++|+++.+|... ....+....+..++..+.++.. .
T Consensus 234 ~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (363)
T cd08279 234 ASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSAN 313 (363)
T ss_pred CCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcC
Confidence 765322 2222 5679999999997667899999999999999998654 2344555566666777666643 2
Q ss_pred CHHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEE
Q 018158 306 GMRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFV 351 (360)
Q Consensus 306 ~~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvv 351 (360)
..+.++++++++.++.+++ .+ ++|+++++++|++.+.+++..+.++
T Consensus 314 ~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 314 PRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred cHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 3567889999999999875 24 8899999999999999888765554
No 54
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=2.6e-40 Score=306.76 Aligned_cols=328 Identities=19% Similarity=0.274 Sum_probs=264.1
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC---------CCCCCCccccccceEEEEe
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG---------ITMYPVVPGHEITGIITKV 80 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---------~~~~p~~~G~e~~G~V~~v 80 (360)
||++++ + .++.+++++.+.|++++++|+||+.++++|++|++...|... ..++|.++|||++|+|+++
T Consensus 1 mka~~~--~-~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~v 77 (350)
T cd08256 1 MRAVVC--H-GPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVEL 77 (350)
T ss_pred CeeEEE--e-cCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEe
Confidence 355554 3 346799999999999999999999999999999998887531 1145778999999999999
Q ss_pred cCCCC--CCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc-eeEECCCCCCc
Q 018158 81 GSNVK--NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR-FVVHVPENIAM 157 (360)
Q Consensus 81 G~~v~--~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~-~~~~iP~~~~~ 157 (360)
|+.++ .|++||+|++. ....|+.|..|..|..++|... .+.|.. ....|+|++|+.++++ .++++|+++++
T Consensus 78 G~~v~~~~~~~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~g~~---~~~~g~~~~~~~~~~~~~~~~lP~~~~~ 151 (350)
T cd08256 78 GEGAEERGVKVGDRVISE-QIVPCWNCRFCNRGQYWMCQKH--DLYGFQ---NNVNGGMAEYMRFPKEAIVHKVPDDIPP 151 (350)
T ss_pred CCCcccCCCCCCCEEEEC-CcCCCCCChHHhCcCcccCcCc--cceeec---cCCCCcceeeEEcccccceEECCCCCCH
Confidence 99999 89999999875 4568999999999999999653 222321 0246999999999988 57899999999
Q ss_pred cccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeC
Q 018158 158 DAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILS 236 (360)
Q Consensus 158 ~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~ 236 (360)
++++.+ ..+.++|+++. ..++ .++++|+|.|+|.+|++++|+|+.+|++ ++++++++++.+.+.+ +|+++++++
T Consensus 152 ~~aa~~-~~~~ta~~a~~-~~~~--~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~v~~~ 226 (350)
T cd08256 152 EDAILI-EPLACALHAVD-RANI--KFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK-FGADVVLNP 226 (350)
T ss_pred HHHhhh-hHHHHHHHHHH-hcCC--CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH-cCCcEEecC
Confidence 999888 88899999984 4444 4999999977799999999999999985 7788888888887777 999888877
Q ss_pred ccHHH---HHhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhH-hccCcEEEEeecCCHHHH
Q 018158 237 TNAMQ---MQAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPL-IFGKRSVKGSMTGGMRET 310 (360)
Q Consensus 237 ~~~~~---~~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~ 310 (360)
.+.+. .... +.++|++||++|....+..++++++++|+++.+|.......+....+ ..+++++.++.... ..+
T Consensus 227 ~~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~ 305 (350)
T cd08256 227 PEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGP-YCY 305 (350)
T ss_pred CCcCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCc-hhH
Confidence 65322 2222 45799999999975567889999999999999987654444444333 35677777766543 468
Q ss_pred HHHHHHHhcCCCcc---ceEEECCccHHHHHHHHHcCCCceeEEE
Q 018158 311 QEMMNVCGKYNITC---NIEVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 311 ~~~~~~l~~~~l~~---~i~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
.++++++.++.+++ ..+.|+++++++|++.+++++..+|+++
T Consensus 306 ~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 306 PIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred HHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 88999999999976 3489999999999999999888888874
No 55
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=4.7e-40 Score=304.56 Aligned_cols=323 Identities=23% Similarity=0.346 Sum_probs=268.0
Q ss_pred CCCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCc
Q 018158 21 SGKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLA 99 (360)
Q Consensus 21 ~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 99 (360)
++.+++++.+.|+| .++||+||++++++|++|+..+.|.+....+|.++|||++|+|+++|++++.+++||+|++.+..
T Consensus 9 ~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~ 88 (345)
T cd08286 9 PGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCIS 88 (345)
T ss_pred CCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCCCEEEECCcC
Confidence 45699999999986 89999999999999999999999877555567899999999999999999999999999876554
Q ss_pred cCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc--eeEECCCCCCccccccccchhhhhhchhhcc
Q 018158 100 AACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR--FVVHVPENIAMDAAAPLLCAGITVFCPMKDN 177 (360)
Q Consensus 100 ~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~ 177 (360)
.|+.|++|..++++.|....+ + .+....|++++|+.++.+ .++++|++++..+++.+++.+.+||.++...
T Consensus 89 -~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~ 161 (345)
T cd08286 89 -SCGTCGYCRKGLYSHCESGGW-I-----LGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLN 161 (345)
T ss_pred -CCCCChHHHCcCcccCCCccc-c-----cccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhh
Confidence 799999999999999986422 1 123456999999999987 8999999999999999999999999876555
Q ss_pred CCCCCCCCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hh--cCCCcCE
Q 018158 178 NLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QA--GKRTLDF 251 (360)
Q Consensus 178 ~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~--~~~~~d~ 251 (360)
..++ ++++++|.|+|.+|++++|+|+.+| .+|+++++++++...+++ +|+++++++.+.+.. .. .++++|+
T Consensus 162 ~~~~--~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~i~~~~~~~~~d~ 238 (345)
T cd08286 162 GKVK--PGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKK-LGATHTVNSAKGDAIEQVLELTDGRGVDV 238 (345)
T ss_pred cCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hCCCceeccccccHHHHHHHHhCCCCCCE
Confidence 5544 9999999988999999999999999 689999888888888887 999998887654221 11 2467999
Q ss_pred EEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc---ceEE
Q 018158 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC---NIEV 328 (360)
Q Consensus 252 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~---~i~~ 328 (360)
+||++|....+..+++.++++|+++.+|.......++...++.+++++.+.... .+.++.++++++++.+++ .+++
T Consensus 239 vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~ 317 (345)
T cd08286 239 VIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVD-TNTTPMLLKLVSSGKLDPSKLVTHR 317 (345)
T ss_pred EEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCc-hhhHHHHHHHHHcCCCChHHcEEeE
Confidence 999998766788999999999999999976544555555667788888875443 256788889999998865 2389
Q ss_pred ECCccHHHHHHHHHcCC--CceeEEEec
Q 018158 329 IKPDQINEALDRLARND--VRYRFVIDI 354 (360)
Q Consensus 329 ~~~~~~~~a~~~~~~~~--~~gkvvi~~ 354 (360)
|+++++++|++.+.... ...|++|++
T Consensus 318 ~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 318 FKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred eeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 99999999999998763 335999864
No 56
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=8.6e-41 Score=281.82 Aligned_cols=309 Identities=22% Similarity=0.288 Sum_probs=260.8
Q ss_pred cceeEEecc-CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCC
Q 018158 10 QSVVGWAAH-DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNF 87 (360)
Q Consensus 10 ~~~~~~~~~-~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 87 (360)
-++++|..+ .|.+.+++++.++|....++|+||.+|+.|||+|+-.++|.|+ .+.+|.+-|.|++|+|+.+|+++++|
T Consensus 20 ~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgf 99 (354)
T KOG0025|consen 20 SKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGF 99 (354)
T ss_pred cceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCcc
Confidence 677888887 5666999999999998888899999999999999999999997 45678999999999999999999999
Q ss_pred CCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchh
Q 018158 88 KVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 88 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~ 167 (360)
++||+|+... ...|+|++|.+.+++.++++++.+++++||++..+.
T Consensus 100 k~Gd~VIp~~----------------------------------a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP 145 (354)
T KOG0025|consen 100 KPGDWVIPLS----------------------------------ANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNP 145 (354)
T ss_pred CCCCeEeecC----------------------------------CCCccceeeEeecccceEEcCCcCChhhhheeccCc
Confidence 9999998532 456999999999999999999999999999999999
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeEeeCccHHHH-
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEFILSTNAMQM- 242 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~v~~~~~~~~- 242 (360)
.|||.+|.+.-.+. +||+|+..|+ +++|++.+|+||.+|++-+-+.|+....+.+++. +||++++...+....
T Consensus 146 ~TAyrmL~dfv~L~--~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~ 223 (354)
T KOG0025|consen 146 CTAYRMLKDFVQLN--KGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRK 223 (354)
T ss_pred hHHHHHHHHHHhcC--CCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchh
Confidence 99999998877755 9999999999 9999999999999999988888887665555443 899999865443211
Q ss_pred ----HhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC-CCcccChhhHhccCcEEEEeecCCH----------
Q 018158 243 ----QAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE-APFELPSFPLIFGKRSVKGSMTGGM---------- 307 (360)
Q Consensus 243 ----~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~~---------- 307 (360)
.....++.+.|||+|+..+ ..+.+.|.+||.++.+|.++ .+..++...++++.+.+.|++...+
T Consensus 224 ~~k~~~~~~~prLalNcVGGksa-~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~ 302 (354)
T KOG0025|consen 224 MKKFKGDNPRPRLALNCVGGKSA-TEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEER 302 (354)
T ss_pred hhhhhccCCCceEEEeccCchhH-HHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHH
Confidence 1125679999999999865 67779999999999999877 5788899999999999999987432
Q ss_pred -HHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHc-CCCceeEEEecC
Q 018158 308 -RETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLAR-NDVRYRFVIDIA 355 (360)
Q Consensus 308 -~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~-~~~~gkvvi~~~ 355 (360)
+.+.++.++...|+++.+. +..+|++...|++...+ ....||-+|.+.
T Consensus 303 ~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 303 KEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred HHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence 3356777899999998876 88899999998875544 344467777654
No 57
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=8.5e-40 Score=301.84 Aligned_cols=333 Identities=28% Similarity=0.432 Sum_probs=282.1
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+++++...+.+. +.+.+.+.|.+++++|+|++.++++|+.|+..+.|.++ ....|.++|+|++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~ 79 (338)
T cd08254 1 MKAWRFHKGSKGL-LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFK 79 (338)
T ss_pred CeeEEEecCCCCc-eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCC
Confidence 3445554433333 78888899999999999999999999999999888764 344577899999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.+. .+|+.|..|..++.+.|....+ . +....|+|++|+.++.+.++++|+++++++++.++..+.
T Consensus 80 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ 151 (338)
T cd08254 80 VGDRVAVPAV-IPCGACALCRRGRGNLCLNQGM--P-----GLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVL 151 (338)
T ss_pred CCCEEEECCC-CCCCCChhhhCcCcccCCCCCc--c-----ccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHH
Confidence 9999987664 5899999999999999965322 1 224569999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---H-Hh
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---M-QA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~-~~ 244 (360)
+||+++.....++ +++++||.|+|.+|++++++|+.+|++|+++++++++.+.+++ +|.+++++..+... . ..
T Consensus 152 ta~~~l~~~~~~~--~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 228 (338)
T cd08254 152 TPYHAVVRAGEVK--PGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKE-LGADEVLNSLDDSPKDKKAAG 228 (338)
T ss_pred HHHHHHHhccCCC--CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-hCCCEEEcCCCcCHHHHHHHh
Confidence 9999998877655 9999999877999999999999999999999999999999977 99888877654322 1 12
Q ss_pred cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc
Q 018158 245 GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC 324 (360)
Q Consensus 245 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~ 324 (360)
.++++|+++||+|....+..++++++++|+++.+|.......+....+..++.++.++.....+.+..++++++++.+.+
T Consensus 229 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~ 308 (338)
T cd08254 229 LGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDP 308 (338)
T ss_pred cCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCcc
Confidence 25679999999987767899999999999999998765555556666778888898887777788999999999999876
Q ss_pred ceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 325 NIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 325 ~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.++.+++++++++++.+.+++..||+++++
T Consensus 309 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 309 QVETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred cceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 678999999999999999999999999874
No 58
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1.3e-39 Score=304.61 Aligned_cols=328 Identities=21% Similarity=0.236 Sum_probs=264.6
Q ss_pred CCCCCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEecc
Q 018158 19 DPSGKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97 (360)
Q Consensus 19 ~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 97 (360)
.+++.++++++|.|.+ +++||+||++++++|++|++.+.|.++ ..+|.++|||++|+|+++|++++.|++||+|++.
T Consensus 7 ~~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~- 84 (375)
T cd08282 7 GGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVP- 84 (375)
T ss_pred ecCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCCCEEEEe-
Confidence 3456899999999996 899999999999999999999988764 4468899999999999999999999999999765
Q ss_pred CccCCCCChhhhCCCCCCcccccccccccc---cCCCccccceeeEEEeecc--eeEECCCCCCcc---ccccccchhhh
Q 018158 98 LAAACMECEFCKDSQENYCDKIQFTYNGIF---WDGSITYGGYSEMLVADYR--FVVHVPENIAMD---AAAPLLCAGIT 169 (360)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~---~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~---~aa~l~~~~~t 169 (360)
...+|+.|..|..+.++.|.+....+.|.. +.....+|+|++|+.++.+ .++++|++++++ +++.++..+.+
T Consensus 85 ~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~t 164 (375)
T cd08282 85 FNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPT 164 (375)
T ss_pred CCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHH
Confidence 556799999999999999987432221111 0111346999999999976 899999999998 56788889999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHh-
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQA- 244 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~- 244 (360)
||+++ ....+. +|++|+|.|+|++|++++|+|+.+|+ +|+++++++++.+.+++ +|++ .+++.+.+. ...
T Consensus 165 a~~a~-~~~~~~--~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~i~~~ 239 (375)
T cd08282 165 GWHGL-ELAGVQ--PGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAES-IGAI-PIDFSDGDPVEQILGL 239 (375)
T ss_pred HHHHH-HhcCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cCCe-EeccCcccHHHHHHHh
Confidence 99998 444444 99999998889999999999999998 79999999999998888 9984 556554322 222
Q ss_pred cCCCcCEEEEcCCCcc-----------cHHHHHHHhccCCEEEEeCCCCC-------------CcccChhhHhccCcEEE
Q 018158 245 GKRTLDFILDTVSAKH-----------SLGPILELLKVNGTLSVVGAPEA-------------PFELPSFPLIFGKRSVK 300 (360)
Q Consensus 245 ~~~~~d~vid~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~~-------------~~~~~~~~~~~~~~~i~ 300 (360)
..+++|+++||+|... .+..++++++++|+++.+|.... ...++...++.++..+.
T Consensus 240 ~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (375)
T cd08282 240 EPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFG 319 (375)
T ss_pred hCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEE
Confidence 1357999999998763 37899999999999998876431 12234455666777777
Q ss_pred EeecCCHHHHHHHHHHHhcCCCcc---ceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 301 GSMTGGMRETQEMMNVCGKYNITC---NIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 301 ~~~~~~~~~~~~~~~~l~~~~l~~---~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++.....+.+..+++++.++.+++ .+++|+++++++|++.+.+++ .+|+|+++
T Consensus 320 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~ 375 (375)
T cd08282 320 TGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP 375 (375)
T ss_pred EecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 766656677888999999999986 349999999999999999988 88999863
No 59
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.4e-39 Score=300.50 Aligned_cols=320 Identities=23% Similarity=0.389 Sum_probs=266.6
Q ss_pred CCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCcc
Q 018158 21 SGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAA 100 (360)
Q Consensus 21 ~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 100 (360)
++.+.+.+++.|++.++||+|||.++++|+.|+....+.++...+|.++|+|++|+|+++|++++.|++||+|+.. ...
T Consensus 9 ~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~-~~~ 87 (337)
T cd08261 9 PGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVD-PYI 87 (337)
T ss_pred CCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCCEEEEC-CCC
Confidence 4689999999999999999999999999999999988876555567889999999999999999999999999875 445
Q ss_pred CCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCC
Q 018158 101 ACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI 180 (360)
Q Consensus 101 ~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~ 180 (360)
+|+.|..|..+..+.|.+... .+ ....|+|++|+.++++ ++++|+++++++++++ ..+.++++++ ....+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l 157 (337)
T cd08261 88 SCGECYACRKGRPNCCENLQV--LG-----VHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGV 157 (337)
T ss_pred CCCCChhhhCcCcccCCCCCe--ee-----ecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCC
Confidence 899999999999999964321 11 1236899999999999 9999999999998877 5667888887 44454
Q ss_pred CCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHhc--CCCcCEEEEc
Q 018158 181 DSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQAG--KRTLDFILDT 255 (360)
Q Consensus 181 ~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~--~~~~d~vid~ 255 (360)
.+++++||+|+|.+|++++|+|+.+|++|+++.+++++.+.+++ +|+++++++.+... +... ++++|+++|+
T Consensus 158 --~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~-~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vld~ 234 (337)
T cd08261 158 --TAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLEFARE-LGADDTINVGDEDVAARLRELTDGEGADVVIDA 234 (337)
T ss_pred --CCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHH-hCCCEEecCcccCHHHHHHHHhCCCCCCEEEEC
Confidence 49999999988999999999999999999999999999998877 99999988776422 2222 4579999999
Q ss_pred CCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc--ce-EEECCc
Q 018158 256 VSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC--NI-EVIKPD 332 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~--~i-~~~~~~ 332 (360)
+|....+..++++++++|+++.+|.......++...+..+++++.++.....+.++.+++++.++.+++ .+ ..++++
T Consensus 235 ~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~ 314 (337)
T cd08261 235 TGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHRFPFE 314 (337)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEEEeeHH
Confidence 987667889999999999999998765444445555566778887775555667889999999999986 44 899999
Q ss_pred cHHHHHHHHHcCC-CceeEEEec
Q 018158 333 QINEALDRLARND-VRYRFVIDI 354 (360)
Q Consensus 333 ~~~~a~~~~~~~~-~~gkvvi~~ 354 (360)
++++|++.+.+++ ..+|+|+++
T Consensus 315 ~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 315 DVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred HHHHHHHHHhcCCCceEEEEEeC
Confidence 9999999999884 678999874
No 60
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=1.1e-39 Score=304.42 Aligned_cols=337 Identities=25% Similarity=0.459 Sum_probs=275.4
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCC---
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKN--- 86 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~--- 86 (360)
|++.++... ...+++++.|.|.+.++||+||+.++++|++|+.++.+.++ ..+|.++|||++|+|+.+|+++++
T Consensus 1 ~~a~~~~~~--~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~-~~~p~~~g~e~~G~v~~vG~~~~~~~~ 77 (367)
T cd08263 1 MKAAVLKGP--NPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP-FPPPFVLGHEISGEVVEVGPNVENPYG 77 (367)
T ss_pred CeeEEEecC--CCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC-CCCCcccccccceEEEEeCCCCCCCCc
Confidence 355555433 35688999999999999999999999999999999888763 366789999999999999999988
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCccccccc-c-cccccCC-------------CccccceeeEEEeecceeEEC
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-Y-NGIFWDG-------------SITYGGYSEMLVADYRFVVHV 151 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~-~g~~~~~-------------~~~~g~~~~~~~v~~~~~~~i 151 (360)
|++||+|++.+ ..+|+.|.+|..+..++|.+..++ . .|....| ....|++++|+.++.+.++++
T Consensus 78 ~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (367)
T cd08263 78 LSVGDRVVGSF-IMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL 156 (367)
T ss_pred CCCCCEEEEcC-CCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence 99999998744 448999999999999999975421 1 1111000 123689999999999999999
Q ss_pred CCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCC
Q 018158 152 PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGA 230 (360)
Q Consensus 152 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~ 230 (360)
|+++++.+++.+++.+.|||+++.....+. ++++++|+|+|++|++++++|+.+|++ |++++.++++.+.+++ +|+
T Consensus 157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~--~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~-~g~ 233 (367)
T cd08263 157 PESLDYTESAVLGCAGFTAYGALKHAADVR--PGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKE-LGA 233 (367)
T ss_pred CCCCCHHHHhHhcchHHHHHHHHHhcccCC--CCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-hCC
Confidence 999999999999999999999998877655 999999997799999999999999998 9999989999998877 999
Q ss_pred CeEeeCccHHHH---Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--CcccChhhHhccCcEEEEee
Q 018158 231 DEFILSTNAMQM---QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--PFELPSFPLIFGKRSVKGSM 303 (360)
Q Consensus 231 ~~~v~~~~~~~~---~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~ 303 (360)
++++++++.... ... ++++|++||++++......++++++++|+++.+|.... ...+....++.+++++.++.
T Consensus 234 ~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (367)
T cd08263 234 THTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSY 313 (367)
T ss_pred ceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecC
Confidence 999887654322 222 56799999999986457899999999999999986542 23344455556788887765
Q ss_pred cCC-HHHHHHHHHHHhcCCCccc--e-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 304 TGG-MRETQEMMNVCGKYNITCN--I-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 304 ~~~-~~~~~~~~~~l~~~~l~~~--i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
... .+.++.+++++.++.+.+. + +.|+++++.+|++.+++++..||+|++
T Consensus 314 ~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 314 GARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred CCCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 433 4678899999999998763 3 789999999999999999988999874
No 61
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=9.3e-40 Score=299.32 Aligned_cols=315 Identities=19% Similarity=0.287 Sum_probs=259.5
Q ss_pred ceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCC
Q 018158 11 SVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVG 90 (360)
Q Consensus 11 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 90 (360)
+|.++ .+ ++++++++++.|+++++||+||+.++++|++|++...|.++ .|.++|||++|+|+++|++ +++|
T Consensus 2 ~a~~~--~~-~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G 72 (319)
T cd08242 2 KALVL--DG-GLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVG 72 (319)
T ss_pred eeEEE--eC-CCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCC
Confidence 44444 33 46899999999999999999999999999999999888653 5778999999999999997 7899
Q ss_pred CEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhh
Q 018158 91 DRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITV 170 (360)
Q Consensus 91 d~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta 170 (360)
|+|...+. .+|+.|.+|..|.++.|..... .+. ...+|+|++|+.++.+.++++|++++.++++.+ ....++
T Consensus 73 ~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~ 144 (319)
T cd08242 73 KRVVGEIN-IACGRCEYCRRGLYTHCPNRTV--LGI----VDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAA 144 (319)
T ss_pred CeEEECCC-cCCCCChhhhCcCcccCCCCcc--cCc----cCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHH
Confidence 99977544 4699999999999999986321 111 023699999999999999999999999888754 444566
Q ss_pred hchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcC
Q 018158 171 FCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLD 250 (360)
Q Consensus 171 ~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d 250 (360)
|.++.. .. ++++++++|+|+|.+|++++|+|+.+|++|+++++++++++.+++ +|++.++++.+. ..+.++|
T Consensus 145 ~~~~~~-~~--~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~----~~~~~~d 216 (319)
T cd08242 145 LEILEQ-VP--ITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALARR-LGVETVLPDEAE----SEGGGFD 216 (319)
T ss_pred HHHHHh-cC--CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-cCCcEEeCcccc----ccCCCCC
Confidence 766644 33 449999999988999999999999999999999999999999998 999888876543 2356799
Q ss_pred EEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCC--ccce-E
Q 018158 251 FILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNI--TCNI-E 327 (360)
Q Consensus 251 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l--~~~i-~ 327 (360)
+++|++|....+..++++++++|+++..+.......++...+..++.++.++.... ++.+++++.++.+ .+.+ +
T Consensus 217 ~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~l~~~~~~~~ 293 (319)
T cd08242 217 VVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGP---FAPALRLLRKGLVDVDPLITA 293 (319)
T ss_pred EEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEeccc---HHHHHHHHHcCCCChhhceEE
Confidence 99999988667889999999999999887655555566666777888888876543 7788899999998 3445 8
Q ss_pred EECCccHHHHHHHHHcCCCceeEEEec
Q 018158 328 VIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 328 ~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.|+++++++|++.+.++. .+|+|+++
T Consensus 294 ~~~l~~~~~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 294 VYPLEEALEAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred EEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 999999999999998776 48999863
No 62
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=1.6e-39 Score=300.24 Aligned_cols=328 Identities=23% Similarity=0.378 Sum_probs=265.0
Q ss_pred cCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhc-cCCC--CCCCCCccccccceEEEEecCCCCCCCCCCEEE
Q 018158 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVK-NDWG--ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94 (360)
Q Consensus 18 ~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 94 (360)
+.+.+.+.+++.+.|+++++||+||+.++++|++|+..++ +.++ ...+|.++|+|++|+|+++|++|+.|++||+|+
T Consensus 3 ~~~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~ 82 (339)
T cd08232 3 IHAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVA 82 (339)
T ss_pred eccCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEE
Confidence 3556899999999999999999999999999999998764 3221 224577899999999999999999999999998
Q ss_pred eccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchh
Q 018158 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPM 174 (360)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l 174 (360)
+. ..+.|+.|.+|..|+.+.|.++.+. |....-...+|+|++|+.++.+.++++|+++++++++. ...+.+||+++
T Consensus 83 ~~-~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l 158 (339)
T cd08232 83 VN-PSRPCGTCDYCRAGRPNLCLNMRFL--GSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAV 158 (339)
T ss_pred Ec-cCCcCCCChHHhCcCcccCccccce--eeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHH
Confidence 76 4557999999999999999985331 11000012469999999999999999999999998865 57778999998
Q ss_pred hccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHH--HHhcCCCcCE
Q 018158 175 KDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ--MQAGKRTLDF 251 (360)
Q Consensus 175 ~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~--~~~~~~~~d~ 251 (360)
..... .++++|||.|+|.+|++++|+|+.+|+ +|+++++++++.+.+++ +|+++++++++... ......++|+
T Consensus 159 ~~~~~---~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~vd~ 234 (339)
T cd08232 159 NRAGD---LAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARA-MGADETVNLARDPLAAYAADKGDFDV 234 (339)
T ss_pred HhcCC---CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-cCCCEEEcCCchhhhhhhccCCCccE
Confidence 77653 289999998889999999999999999 79999988888887777 99999888765431 1112356999
Q ss_pred EEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc--ce-EE
Q 018158 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC--NI-EV 328 (360)
Q Consensus 252 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~--~i-~~ 328 (360)
++|+.|....+..++++++++|+++.+|............++.+++++.+.... .+.++.+++++.++.+++ .+ ++
T Consensus 235 vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 313 (339)
T cd08232 235 VFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRF-DDEFAEAVRLLAAGRIDVRPLITAV 313 (339)
T ss_pred EEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecC-HHHHHHHHHHHHcCCCCchhheeEE
Confidence 999998765688999999999999999865433334444456677888776543 457888999999998853 24 89
Q ss_pred ECCccHHHHHHHHHcCCCceeEEEec
Q 018158 329 IKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 329 ~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
|+++++++|++.+.+++..||+|+++
T Consensus 314 ~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 314 FPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred ecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 99999999999999888889999874
No 63
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=6.5e-40 Score=302.63 Aligned_cols=295 Identities=18% Similarity=0.194 Sum_probs=242.0
Q ss_pred CCCCCceEEEEeC----CCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCcccccc--ceEEEEecCCCCCCCCCC
Q 018158 19 DPSGKITPYIFKR----RENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEI--TGIITKVGSNVKNFKVGD 91 (360)
Q Consensus 19 ~~~~~l~~~~~~~----p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~--~G~V~~vG~~v~~~~~Gd 91 (360)
.++..|++++.+. |+|++|||||||++++||+.|++.+.|.+.. ..+|.++|++. .|.+..+|+.+++|++||
T Consensus 16 ~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd 95 (338)
T cd08295 16 PKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGD 95 (338)
T ss_pred CCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecCCCCCCCCC
Confidence 3345899999887 7899999999999999999999998885432 35678888754 566666888899999999
Q ss_pred EEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeec-ceeEECC-CCCCcc-ccccccchhh
Q 018158 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADY-RFVVHVP-ENIAMD-AAAPLLCAGI 168 (360)
Q Consensus 92 ~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~-~~~~~iP-~~~~~~-~aa~l~~~~~ 168 (360)
+|+. .|+|+||+++++ +.++++| ++++++ +++++++++.
T Consensus 96 ~V~~--------------------------------------~g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~ 137 (338)
T cd08295 96 LVWG--------------------------------------FTGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGL 137 (338)
T ss_pred EEEe--------------------------------------cCCceeEEEecchhceeecCCCCCCHHHHHHhcccHHH
Confidence 9974 268999999999 7999995 678876 7899999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH-HH---HH
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA-MQ---MQ 243 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~---~~ 243 (360)
|||+++.....++ +|++++|+|+ |++|++++|+|+.+|++|+++++++++.+.+++++|+++++++.+. +. ..
T Consensus 138 tA~~~l~~~~~~~--~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~ 215 (338)
T cd08295 138 TAYAGFYEVCKPK--KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALK 215 (338)
T ss_pred HHHHHHHHhcCCC--CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHH
Confidence 9999997766655 9999999999 9999999999999999999999999999998877999999986532 11 12
Q ss_pred h-cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-c-----ccChhhHhccCcEEEEeecCCH-----HHHH
Q 018158 244 A-GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-F-----ELPSFPLIFGKRSVKGSMTGGM-----RETQ 311 (360)
Q Consensus 244 ~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~~~~~i~~~~~~~~-----~~~~ 311 (360)
. .+.++|++||++|+. .+..++++++++|+++.+|..... . ..+...+..+++++.++..... +.++
T Consensus 216 ~~~~~gvd~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 294 (338)
T cd08295 216 RYFPNGIDIYFDNVGGK-MLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLE 294 (338)
T ss_pred HhCCCCcEEEEECCCHH-HHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHH
Confidence 2 246899999999974 679999999999999999865421 1 1233556677888888654332 3467
Q ss_pred HHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 312 EMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 312 ~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++++++.++.+++.+ ..|+++++++|++.+++++..||+|+++
T Consensus 295 ~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 295 EMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 888999999998765 7899999999999999999899999874
No 64
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=3.5e-39 Score=296.92 Aligned_cols=328 Identities=27% Similarity=0.425 Sum_probs=273.4
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+++++. .+++.+.+++.|.|++.+++|+|+++++++|++|++...|.++....|.++|||++|+|+++|++++.|++
T Consensus 1 m~a~~~~--~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~ 78 (332)
T cd08259 1 MKAAILH--KPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKP 78 (332)
T ss_pred CeEEEEe--cCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCC
Confidence 3444443 35678999999999999999999999999999999999887655556789999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|++.... .|+.|.+|..+..++|.+. ...| ....|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~t 150 (332)
T cd08259 79 GDRVILYYYI-PCGKCEYCLSGEENLCRNR--AEYG-----EEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGT 150 (332)
T ss_pred CCEEEECCCC-CCcCChhhhCCCcccCCCc--cccc-----cccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHH
Confidence 9999886544 6999999999999999863 2222 245799999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH-HHHHhcCC
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA-MQMQAGKR 247 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~~~~~~~ 247 (360)
||+++.. ..++ ++++++|+|+ |++|++++++++..|++|+++++++++.+.+.+ +|.+.+++..+. +.... ..
T Consensus 151 a~~~l~~-~~~~--~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~ 225 (332)
T cd08259 151 AVHALKR-AGVK--KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKE-LGADYVIDGSKFSEDVKK-LG 225 (332)
T ss_pred HHHHHHH-hCCC--CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-cCCcEEEecHHHHHHHHh-cc
Confidence 9999987 5544 9999999999 999999999999999999999999998888877 898877765541 11222 23
Q ss_pred CcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCc-ccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce
Q 018158 248 TLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPF-ELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI 326 (360)
Q Consensus 248 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i 326 (360)
++|++++++|... ...++++++++|+++.+|...... .+.......++..+.++.....++++.+++++.++.+.+.+
T Consensus 226 ~~d~v~~~~g~~~-~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 304 (332)
T cd08259 226 GADVVIELVGSPT-IEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPVI 304 (332)
T ss_pred CCCEEEECCChHH-HHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCccce
Confidence 7999999998764 688999999999999998754322 22333344567777777666678889999999999987765
Q ss_pred -EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 327 -EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 327 -~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+.|+++++++|++.+.+++..||++++
T Consensus 305 ~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 305 DRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred eEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 899999999999999998888999874
No 65
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=1.2e-39 Score=299.36 Aligned_cols=321 Identities=23% Similarity=0.355 Sum_probs=263.1
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+++++...+ .+.+++++.+.|+++++||+||+.++++|++|++.+.+. ....+|.++|||++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 78 (325)
T cd08264 1 MKALVFEKSG-IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKK 78 (325)
T ss_pred CeeEEeccCC-CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCC
Confidence 3455543333 478899998888899999999999999999999887652 22245778999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|++.+.. +|+.|.+|..|.+++|.+..+ .| ....|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~-~~~~c~~~~~~~~~~~~~~~~--~~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~ 150 (325)
T cd08264 79 GDRVVVYNRV-FDGTCDMCLSGNEMLCRNGGI--IG-----VVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALT 150 (325)
T ss_pred CCEEEECCCc-CCCCChhhcCCCccccCccce--ee-----ccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHH
Confidence 9999887654 899999999999999997432 12 235689999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH-HHHHhcCC
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA-MQMQAGKR 247 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~~~~~~~ 247 (360)
||+++.. .. ++++++++|+|+ |++|++++++|+.+|++|+++++ .+.+++ +|++++++.++. .......+
T Consensus 151 a~~~l~~-~~--~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~~-~g~~~~~~~~~~~~~l~~~~~ 222 (325)
T cd08264 151 AYHALKT-AG--LGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLKE-FGADEVVDYDEVEEKVKEITK 222 (325)
T ss_pred HHHHHHh-cC--CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHHH-hCCCeeecchHHHHHHHHHhC
Confidence 9999876 44 449999999999 99999999999999999988873 366666 999888877642 22222236
Q ss_pred CcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC-CCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce
Q 018158 248 TLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE-APFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI 326 (360)
Q Consensus 248 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i 326 (360)
++|+++|++|.. .+..++++++++|+++.+|... ....++...+..++.++.++..+.+++++.+++++...++ ...
T Consensus 223 ~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 300 (325)
T cd08264 223 MADVVINSLGSS-FWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLKV-KVW 300 (325)
T ss_pred CCCEEEECCCHH-HHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCCc-eeE
Confidence 899999999975 6899999999999999998753 2345566677778889998888788889999999864442 234
Q ss_pred EEECCccHHHHHHHHHcCCCceeE
Q 018158 327 EVIKPDQINEALDRLARNDVRYRF 350 (360)
Q Consensus 327 ~~~~~~~~~~a~~~~~~~~~~gkv 350 (360)
+.|+++++++|++.+.+++..+|+
T Consensus 301 ~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 301 KTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred EEEcHHHHHHHHHHHHcCCCcccc
Confidence 899999999999999988777775
No 66
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=2e-39 Score=299.78 Aligned_cols=328 Identities=22% Similarity=0.297 Sum_probs=262.0
Q ss_pred ceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCC---CCCCCCCccccccceEEEEecCCCCCC
Q 018158 11 SVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW---GITMYPVVPGHEITGIITKVGSNVKNF 87 (360)
Q Consensus 11 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~ 87 (360)
|+.++ .++++.+++.++|.|+|+++||+||++++++|++|++++.+.. ....+|.++|||++|+|+++|++++.|
T Consensus 2 ~~~~~--~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~ 79 (341)
T PRK05396 2 KALVK--LKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGF 79 (341)
T ss_pred ceEEE--ecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcC
Confidence 44444 4455789999999999999999999999999999999766532 122457789999999999999999999
Q ss_pred CCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchh
Q 018158 88 KVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 88 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~ 167 (360)
++||+|++.+. ..|+.|.+|..+.+++|....+ . +...+|+|++|+.++.+.++++|+++++++++.+ ..+
T Consensus 80 ~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~ 150 (341)
T PRK05396 80 KVGDRVSGEGH-IVCGHCRNCRAGRRHLCRNTKG--V-----GVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPF 150 (341)
T ss_pred CCCCEEEECCC-CCCCCChhhhCcChhhCCCcce--e-----eecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHH
Confidence 99999988754 4899999999999999975321 1 1235799999999999999999999999888744 444
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HH
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQ 243 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~ 243 (360)
.++++++.. ... +|++++|.|+|++|++++|+|+.+|+ +|+++++++++.+.+++ +|+++++++++.+. ..
T Consensus 151 ~~~~~~~~~--~~~--~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~ 225 (341)
T PRK05396 151 GNAVHTALS--FDL--VGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARK-MGATRAVNVAKEDLRDVMA 225 (341)
T ss_pred HHHHHHHHc--CCC--CCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-hCCcEEecCccccHHHHHH
Confidence 555544432 223 89999998889999999999999999 68888888888888888 99999988765422 22
Q ss_pred hc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCC-HHHHHHHHHHHhcC
Q 018158 244 AG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG-MRETQEMMNVCGKY 320 (360)
Q Consensus 244 ~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~l~~~ 320 (360)
.. ++++|++|||.|....+..++++++++|+++.+|.......++...+..+++++.++.... .+.+..+++++.++
T Consensus 226 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 305 (341)
T PRK05396 226 ELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG 305 (341)
T ss_pred HhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC
Confidence 22 5689999999998777899999999999999999766555555566777888888765322 34456778888888
Q ss_pred -CCccce-EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 321 -NITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 321 -~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
++.+.+ +.|+++++++|++.+.+++ .||++++++
T Consensus 306 ~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 306 LDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred CChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 454444 8999999999999998887 799999875
No 67
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=2.7e-39 Score=299.39 Aligned_cols=323 Identities=22% Similarity=0.321 Sum_probs=264.9
Q ss_pred CCCCceEEEEeCCCCC-CCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccC
Q 018158 20 PSGKITPYIFKRRENG-VNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCL 98 (360)
Q Consensus 20 ~~~~l~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 98 (360)
+++.+++++++.|.|. ++||+||+.++++|+.|++...|.++ ..+|.++|+|++|+|+++|++++.+++||+|++.+.
T Consensus 8 ~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 86 (344)
T cd08284 8 GPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFT 86 (344)
T ss_pred cCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCCCEEEEccc
Confidence 3468999999999985 99999999999999999999888763 445788999999999999999999999999988765
Q ss_pred ccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc--eeEECCCCCCccccccccchhhhhhchhhc
Q 018158 99 AAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR--FVVHVPENIAMDAAAPLLCAGITVFCPMKD 176 (360)
Q Consensus 99 ~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~ 176 (360)
. .|+.|.+|..+..+.|.+.... |.. .....+|+|++|+.++.+ .++++|+++++++++++++.+.|||+++..
T Consensus 87 ~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~~ 162 (344)
T cd08284 87 I-ACGECFYCRRGQSGRCAKGGLF--GYA-GSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKR 162 (344)
T ss_pred C-CCCCChHHhCcCcccCCCCccc--ccc-ccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhHh
Confidence 4 7999999999999999864211 100 001246999999999975 999999999999999999999999999976
Q ss_pred cCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccH---HHHHhc--CCCcC
Q 018158 177 NNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNA---MQMQAG--KRTLD 250 (360)
Q Consensus 177 ~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~---~~~~~~--~~~~d 250 (360)
.. +.++++|+|+|+|.+|++++|+|+.+|+ +|+++++++++...+++ +|+. .++.+.. ...... ++++|
T Consensus 163 -~~--~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~~~l~~~~~~~~~d 237 (344)
T cd08284 163 -AQ--VRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAA-LGAE-PINFEDAEPVERVREATEGRGAD 237 (344)
T ss_pred -cC--CccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH-hCCe-EEecCCcCHHHHHHHHhCCCCCC
Confidence 34 4499999999889999999999999997 89999888888888877 9975 3444432 122222 46899
Q ss_pred EEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc---ce
Q 018158 251 FILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC---NI 326 (360)
Q Consensus 251 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~---~i 326 (360)
++||++|....+..++++++++|+++.+|.... .........+.+++++.+......+.++++++++.++.+++ .+
T Consensus 238 vvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 317 (344)
T cd08284 238 VVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLDLEFLID 317 (344)
T ss_pred EEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCCChHHhEe
Confidence 999999976678999999999999999997652 33344445667788877655555678899999999999875 34
Q ss_pred EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 327 EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 327 ~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+.|++++++++++.+.+++. ||+|++
T Consensus 318 ~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 318 HRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred eeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 88999999999999998887 999985
No 68
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.8e-39 Score=298.46 Aligned_cols=327 Identities=20% Similarity=0.260 Sum_probs=266.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+++++. +++.+++++.|.|.| +++||+||+.++++|++|++.+.|.++ ...|.++|||++|+|+++|++++.++
T Consensus 1 m~~~~~~---~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (345)
T cd08287 1 MRATVIH---GPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP-TRAPAPIGHEFVGVVEEVGSEVTSVK 76 (345)
T ss_pred CceeEEe---cCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC-CCCCcccccceEEEEEEeCCCCCccC
Confidence 4555553 346799999999986 899999999999999999998888763 34578999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc--eeEECCCCCCccccc-----
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR--FVVHVPENIAMDAAA----- 161 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~aa----- 161 (360)
+||+|++. ....|+.|..|..|+.+.|.+..+ . +....|+|++|+.++.+ .++++|++++++++.
T Consensus 77 ~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~ 148 (345)
T cd08287 77 PGDFVIAP-FAISDGTCPFCRAGFTTSCVHGGF--W-----GAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLL 148 (345)
T ss_pred CCCEEEec-cccCCCCChhhhCcCcccCCCCCc--c-----cCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhH
Confidence 99999873 455699999999999999986432 1 22467999999999975 899999999882221
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
++...+.+||+++.. .. ++++++++|.|+|++|++++|+|+.+|++ ++++++++++.+.+++ +|+++++++.+..
T Consensus 149 ~l~~~~~~a~~~~~~-~~--~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~-~ga~~v~~~~~~~ 224 (345)
T cd08287 149 ALSDVMGTGHHAAVS-AG--VRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALARE-FGATDIVAERGEE 224 (345)
T ss_pred hhhcHHHHHHHHHHh-cC--CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cCCceEecCCccc
Confidence 223567888998863 34 44999999988899999999999999996 8888888888888887 9999999887653
Q ss_pred HH---Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHH
Q 018158 241 QM---QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMN 315 (360)
Q Consensus 241 ~~---~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 315 (360)
.. ... +.++|+++|++|....+..++++++++|+++.+|.......++....+.+++++.+......+.++++++
T Consensus 225 ~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (345)
T cd08287 225 AVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLD 304 (345)
T ss_pred HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHH
Confidence 22 222 4579999999987767899999999999999998765444455545677889998876666778999999
Q ss_pred HHhcCCCcc---ceEEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 316 VCGKYNITC---NIEVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 316 ~l~~~~l~~---~i~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
++.++++++ .++.++++++++|++.+.+++.. |++|+
T Consensus 305 ~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 344 (345)
T cd08287 305 DVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR 344 (345)
T ss_pred HHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence 999999875 23899999999999999887765 99985
No 69
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=4e-39 Score=298.09 Aligned_cols=319 Identities=24% Similarity=0.375 Sum_probs=268.9
Q ss_pred CCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCcc
Q 018158 21 SGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAA 100 (360)
Q Consensus 21 ~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 100 (360)
++.+.+++.+.|++.+++|+||++++++|+.|+..+.|.+....+|.++|+|++|+|+++|++++.|++||+|++.+ ..
T Consensus 9 ~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~-~~ 87 (343)
T cd08235 9 PNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGDRVFVAP-HV 87 (343)
T ss_pred CCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCCEEEEcc-CC
Confidence 35799999999999999999999999999999999888664345577899999999999999999999999998864 55
Q ss_pred CCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecce-----eEECCCCCCccccccccchhhhhhchhh
Q 018158 101 ACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRF-----VVHVPENIAMDAAAPLLCAGITVFCPMK 175 (360)
Q Consensus 101 ~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~-----~~~iP~~~~~~~aa~l~~~~~ta~~~l~ 175 (360)
+|+.|.+|..|+.++|.+..+ . +....|+|++|+.++.+. ++++|+++++.+++.+ ..+.+||+++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~ 159 (343)
T cd08235 88 PCGECHYCLRGNENMCPNYKK--F-----GNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQR 159 (343)
T ss_pred CCCCChHHHCcCcccCCCcce--e-----ccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHHH
Confidence 788999999999999987422 1 224569999999999998 9999999999998766 78889999997
Q ss_pred ccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHHHH---hc--CCCc
Q 018158 176 DNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQMQ---AG--KRTL 249 (360)
Q Consensus 176 ~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~---~~--~~~~ 249 (360)
.. . +.+|++|+|+|+|.+|++++|+|+..|++ |+++++++++.+.+++ +|.++++++++.+... .. ++++
T Consensus 160 ~~-~--~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~-~g~~~~~~~~~~~~~~~i~~~~~~~~v 235 (343)
T cd08235 160 KA-G--IKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKK-LGADYTIDAAEEDLVEKVRELTDGRGA 235 (343)
T ss_pred hc-C--CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCcEEecCCccCHHHHHHHHhCCcCC
Confidence 65 4 44999999998899999999999999999 9999999999998877 9998888877653222 12 4679
Q ss_pred CEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC--cccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc--c
Q 018158 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP--FELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC--N 325 (360)
Q Consensus 250 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~--~ 325 (360)
|+++|+++....+...+++++++|+++.+|..... ..+....+..+++++.++.....+.++.+++++.++.+.+ .
T Consensus 236 d~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 315 (343)
T cd08235 236 DVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKIDVKDL 315 (343)
T ss_pred CEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCCChHHh
Confidence 99999999766678999999999999999865432 3444456677888888887777778899999999999863 3
Q ss_pred e-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 326 I-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 326 i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+ ..|+++++.+|++.+.+++ .||+|+.
T Consensus 316 ~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 316 ITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred eeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 3 7899999999999999999 8999873
No 70
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.1e-39 Score=298.77 Aligned_cols=321 Identities=23% Similarity=0.365 Sum_probs=261.5
Q ss_pred CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccC-CC--CCCCCCccccccceEEEEecCCCCCCCCCCEEEe
Q 018158 19 DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKND-WG--ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAV 95 (360)
Q Consensus 19 ~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~-~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 95 (360)
.++..+.+++.+.|.+.++||+||+.++++|+.|++.+.+. .+ ....|.++|+|++|+|+++|++++.|++||+|++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 84 (343)
T cd05285 5 HGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAI 84 (343)
T ss_pred ecCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEE
Confidence 34478999999999999999999999999999999876432 11 1235678999999999999999999999999987
Q ss_pred ccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhh
Q 018158 96 GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMK 175 (360)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~ 175 (360)
.+ ..+|+.|.+|+.|.+++|.+..+. +. ....|+|++|+.++++.++++|+++++++++.+ ..+.+||+++
T Consensus 85 ~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~- 155 (343)
T cd05285 85 EP-GVPCRTCEFCKSGRYNLCPDMRFA--AT----PPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC- 155 (343)
T ss_pred cc-ccCCCCChhHhCcCcccCcCcccc--cc----ccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-
Confidence 64 459999999999999999763221 10 124699999999999999999999999998876 5778888887
Q ss_pred ccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHH------HHhc--C
Q 018158 176 DNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQ------MQAG--K 246 (360)
Q Consensus 176 ~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~------~~~~--~ 246 (360)
....+ +++++++|.|+|++|++++|+|+.+|++ |+++++++++.+.+++ +|+++++++++.+. .... +
T Consensus 156 ~~~~~--~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~ 232 (343)
T cd05285 156 RRAGV--RPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKE-LGATHTVNVRTEDTPESAEKIAELLGG 232 (343)
T ss_pred HhcCC--CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-cCCcEEeccccccchhHHHHHHHHhCC
Confidence 44444 4999999998899999999999999997 9999989999998877 99999988765421 2222 4
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCc--c
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNIT--C 324 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~--~ 324 (360)
+++|++|||.|....+...+++++++|+++.+|.......++...+..+++++.++.... +.++.+++++.++.+. +
T Consensus 233 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~ 311 (343)
T cd05285 233 KGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYA-NTYPTAIELLASGKVDVKP 311 (343)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccCh-HHHHHHHHHHHcCCCCchH
Confidence 679999999998656789999999999999998755444445556677788888765443 6788899999999864 3
Q ss_pred ce-EEECCccHHHHHHHHHcCC-CceeEEE
Q 018158 325 NI-EVIKPDQINEALDRLARND-VRYRFVI 352 (360)
Q Consensus 325 ~i-~~~~~~~~~~a~~~~~~~~-~~gkvvi 352 (360)
.+ +.|+++++.+|++.+.+++ ..+|++|
T Consensus 312 ~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 312 LITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred hEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 33 8899999999999999875 4589998
No 71
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=2e-39 Score=297.66 Aligned_cols=304 Identities=20% Similarity=0.292 Sum_probs=253.1
Q ss_pred cceeEEeccCCC-CCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCC
Q 018158 10 QSVVGWAAHDPS-GKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNF 87 (360)
Q Consensus 10 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 87 (360)
|+++++.-.+++ +.++++++|.|.+.++||+|||.++++|++|++.+.|.++ ....|.++|||++|+|+++|++++.|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 455555433322 3588999999999999999999999999999999888764 23457889999999999999999999
Q ss_pred CCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchh
Q 018158 88 KVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 88 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~ 167 (360)
++||+|++. ...|+|++|+.++++.++++|+++++++++.+++.+
T Consensus 81 ~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~ 125 (324)
T cd08292 81 QVGQRVAVA-----------------------------------PVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMP 125 (324)
T ss_pred CCCCEEEec-----------------------------------cCCCcceeEEEEchHHeEECCCCCCHHHhhhccccH
Confidence 999999862 125999999999999999999999999999999999
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHH---
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQ--- 243 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~--- 243 (360)
.+||+++.. .. +.+|++++|+|+ |.+|++++|+|+.+|++|+++.+++++.+.+++ +|+++++++.+.+...
T Consensus 126 ~ta~~~~~~-~~--~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~i~ 201 (324)
T cd08292 126 LSALMLLDF-LG--VKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-LGIGPVVSTEQPGWQDKVR 201 (324)
T ss_pred HHHHHHHHh-hC--CCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-cCCCEEEcCCCchHHHHHH
Confidence 999998865 44 449999999998 999999999999999999999999999999988 8998888877643222
Q ss_pred hc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC-CCcccChhhHhccCcEEEEeecCC----------HHHH
Q 018158 244 AG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE-APFELPSFPLIFGKRSVKGSMTGG----------MRET 310 (360)
Q Consensus 244 ~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~----------~~~~ 310 (360)
.. ++++|++||++|.. ....++++++++|+++.+|... ....+....++.++.++.++.... .+.+
T Consensus 202 ~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (324)
T cd08292 202 EAAGGAPISVALDSVGGK-LAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMI 280 (324)
T ss_pred HHhCCCCCcEEEECCCCh-hHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHH
Confidence 22 56899999999986 5689999999999999998753 234455555667889988876532 2457
Q ss_pred HHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 311 QEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 311 ~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+.+++++.++.+++.+ +.|+++++++|++.+.+....||++++
T Consensus 281 ~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 281 AELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 8888999999998655 899999999999999988878899874
No 72
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=9.1e-39 Score=297.92 Aligned_cols=321 Identities=24% Similarity=0.378 Sum_probs=256.9
Q ss_pred CCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC---CCCCCCccccccceEEEEecCCCCCCCCCCEEEec
Q 018158 20 PSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG---ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96 (360)
Q Consensus 20 ~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 96 (360)
+++.+++++.+.|+++++||+||++++++|++|++...+... ...+|.++|||++|+|+++|+++++|++||+|++.
T Consensus 25 ~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 104 (364)
T PLN02702 25 GVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALE 104 (364)
T ss_pred cCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEc
Confidence 347899999999989999999999999999999998876321 22357789999999999999999999999999886
Q ss_pred cCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhc
Q 018158 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKD 176 (360)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~ 176 (360)
+. .+|+.|..|.+|.++.|.+..+ .+. ....|+|++|+.++.+.++++|+++++++++.. ....++|+++..
T Consensus 105 ~~-~~~~~c~~c~~g~~~~c~~~~~--~~~----~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~~~ 176 (364)
T PLN02702 105 PG-ISCWRCNLCKEGRYNLCPEMKF--FAT----PPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHACRR 176 (364)
T ss_pred CC-CCCCCCcchhCcCcccCCCccc--cCC----CCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHHHh
Confidence 55 4899999999999999986322 111 123699999999999999999999999888752 233346777633
Q ss_pred cCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCcc--H---HHHH----hcC
Q 018158 177 NNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTN--A---MQMQ----AGK 246 (360)
Q Consensus 177 ~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~--~---~~~~----~~~ 246 (360)
.. +.++++++|+|+|++|++++|+|+.+|++ |+++++++++.+.+++ +|+++++++.. . .... ..+
T Consensus 177 -~~--~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (364)
T PLN02702 177 -AN--IGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQ-LGADEIVLVSTNIEDVESEVEEIQKAMG 252 (364)
T ss_pred -cC--CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCCEEEecCcccccHHHHHHHHhhhcC
Confidence 33 44999999998899999999999999996 7888888888888887 99988776431 1 1111 124
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCc--c
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNIT--C 324 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~--~ 324 (360)
+++|++||++|....+..++++++++|+++.+|.......+....+..+++++.++... ...++.+++++.++.+. +
T Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~l~~~~ 331 (364)
T PLN02702 253 GGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRY-RNTWPLCLEFLRSGKIDVKP 331 (364)
T ss_pred CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccC-hHHHHHHHHHHHcCCCCchH
Confidence 57999999999766789999999999999999975444444556677888999887653 35788899999999885 3
Q ss_pred ce-EEECC--ccHHHHHHHHHcCCCceeEEEe
Q 018158 325 NI-EVIKP--DQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 325 ~i-~~~~~--~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
.+ +.|++ +++++|++.+++++..+|+++.
T Consensus 332 ~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 332 LITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred heEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 34 78665 7999999999998888999985
No 73
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.1e-39 Score=299.65 Aligned_cols=323 Identities=22% Similarity=0.268 Sum_probs=259.3
Q ss_pred cceeEEeccCCCCCceEEE-EeCCCCCCCeEEEEEeeeecccchhhhhccCCC--------------------CCCCCCc
Q 018158 10 QSVVGWAAHDPSGKITPYI-FKRRENGVNDVTIKILYCGICHTDIHHVKNDWG--------------------ITMYPVV 68 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~-~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~--------------------~~~~p~~ 68 (360)
|++..+...+.+..+.+.+ .+.|++.+++|+|||.++++|++|+++..|.++ ....|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 4555554444445677764 577788999999999999999999998877542 2346789
Q ss_pred cccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeeccee
Q 018158 69 PGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFV 148 (360)
Q Consensus 69 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~ 148 (360)
+|||++|+|+++|++++.|++||+|++.+. ..|+.|..|. .|.. .+...+|+|++|+.++.+.+
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~-----~~~~----------~~~~~~g~~~~~~~v~~~~~ 144 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPS-IRDPPEDDPA-----DIDY----------IGSERDGGFAEYTVVPAENA 144 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecC-cCCCCccccc-----cccc----------cCCCCCccceEEEEecHHHc
Confidence 999999999999999999999999987543 3466655432 1111 11124599999999999999
Q ss_pred EECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH
Q 018158 149 VHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL 227 (360)
Q Consensus 149 ~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~ 227 (360)
+++|+++++.+++++++.+.|||+++.. ..+ .++++++|+|+ |++|++++++|+.+|++|+++++++ +++.+++
T Consensus 145 ~~ip~~~~~~~~a~l~~~~~ta~~~~~~-~~~--~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~- 219 (350)
T cd08274 145 YPVNSPLSDVELATFPCSYSTAENMLER-AGV--GAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRA- 219 (350)
T ss_pred eeCCCCCCHHHHHhcccHHHHHHHHHhh-cCC--CCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHh-
Confidence 9999999999999999999999999844 444 49999999999 9999999999999999999988665 7888877
Q ss_pred cCCCeEeeCccHHH--H-HhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEee
Q 018158 228 LGADEFILSTNAMQ--M-QAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSM 303 (360)
Q Consensus 228 ~g~~~~v~~~~~~~--~-~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~ 303 (360)
+|++.+++...... . ...++++|++||++|+. .+..++++++++|+++.+|..... ..++...++.++.++.++.
T Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
T cd08274 220 LGADTVILRDAPLLADAKALGGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGST 298 (350)
T ss_pred cCCeEEEeCCCccHHHHHhhCCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEee
Confidence 99876665443211 1 12256899999999975 679999999999999999865443 4556666678899999988
Q ss_pred cCCHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 304 TGGMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 304 ~~~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
....+.++++++++.++.+++.+ +.|+++++++|++.+.+++..||+++++
T Consensus 299 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 299 LGTREVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred cCCHHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 88788899999999999987765 8999999999999999988889999864
No 74
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=4.9e-39 Score=301.48 Aligned_cols=326 Identities=21% Similarity=0.336 Sum_probs=260.8
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCC------C-CCCCCCccccccceEEEEecC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW------G-ITMYPVVPGHEITGIITKVGS 82 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~------~-~~~~p~~~G~e~~G~V~~vG~ 82 (360)
++++++.. ..++++++|.|+++++||+||++++++|++|++.+.+.. + ...+|.++|||++|+|+++|+
T Consensus 29 ~~~~~~~~----~~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 104 (384)
T cd08265 29 LGSKVWRY----PELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGK 104 (384)
T ss_pred ceeEEEeC----CCEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECC
Confidence 44555542 369999999999999999999999999999998876421 1 134578899999999999999
Q ss_pred CCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCC-------
Q 018158 83 NVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENI------- 155 (360)
Q Consensus 83 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~------- 155 (360)
+++.|++||+|++.+. .+|+.|..|..|.+++|.+..+ .| ...+|+|++|+.++++.++++|+++
T Consensus 105 ~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~~~~~~~--~g-----~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~ 176 (384)
T cd08265 105 NVKNFEKGDPVTAEEM-MWCGMCRACRSGSPNHCKNLKE--LG-----FSADGAFAEYIAVNARYAWEINELREIYSEDK 176 (384)
T ss_pred CCCCCCCCCEEEECCC-CCCCCChhhhCcCcccCCCcce--ee-----ecCCCcceeeEEechHHeEECCccccccccCC
Confidence 9999999999988765 4899999999999999987432 22 1347999999999999999999863
Q ss_pred Cccccccccchhhhhhchhhcc-CCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeE
Q 018158 156 AMDAAAPLLCAGITVFCPMKDN-NLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEF 233 (360)
Q Consensus 156 ~~~~aa~l~~~~~ta~~~l~~~-~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~ 233 (360)
+.+ +++++..+.+||+++... ..+ ++|++|+|+|+|++|++++|+|+.+|+ +|+++++++++.+.+++ +|++++
T Consensus 177 ~~~-~a~~~~~~~ta~~al~~~~~~~--~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~ 252 (384)
T cd08265 177 AFE-AGALVEPTSVAYNGLFIRGGGF--RPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKE-MGADYV 252 (384)
T ss_pred CHH-HhhhhhHHHHHHHHHHhhcCCC--CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCCCEE
Confidence 444 566777888999998544 444 499999999889999999999999999 79999988888888888 999888
Q ss_pred eeCccH------HHHHhc--CCCcCEEEEcCCCc-ccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeec
Q 018158 234 ILSTNA------MQMQAG--KRTLDFILDTVSAK-HSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMT 304 (360)
Q Consensus 234 v~~~~~------~~~~~~--~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~ 304 (360)
+++++. ..+... ++++|+++|+.|.. ..+..++++++++|+++.+|.......+....+..+..++.++..
T Consensus 253 v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~ 332 (384)
T cd08265 253 FNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQG 332 (384)
T ss_pred EcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeec
Confidence 876632 112222 56899999999863 357889999999999999997654444455556667778887754
Q ss_pred C-CHHHHHHHHHHHhcCCCccc---eEEECCccHHHHHHHHHcCCCceeEEE
Q 018158 305 G-GMRETQEMMNVCGKYNITCN---IEVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 305 ~-~~~~~~~~~~~l~~~~l~~~---i~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
. ....+.++++++.++.+++. ++.|+++++++|++.+.++ ..||+++
T Consensus 333 ~~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 333 HSGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred cCCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 2 33468899999999998752 3889999999999997665 4688876
No 75
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=8.5e-39 Score=295.65 Aligned_cols=308 Identities=21% Similarity=0.275 Sum_probs=251.1
Q ss_pred CceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-----------CCCCCCccccccceEEEEecCCCCC-CCCC
Q 018158 23 KITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-----------ITMYPVVPGHEITGIITKVGSNVKN-FKVG 90 (360)
Q Consensus 23 ~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-----------~~~~p~~~G~e~~G~V~~vG~~v~~-~~~G 90 (360)
.+++++++.|+++++||+||+.++++|+.|++...|... ...+|.++|+|++|+|+++|+++++ |++|
T Consensus 10 ~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~G 89 (341)
T cd08262 10 PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPGTERKLKVG 89 (341)
T ss_pred ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCCCCcCCCCCC
Confidence 899999999999999999999999999999998887221 2234778999999999999999997 9999
Q ss_pred CEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhh
Q 018158 91 DRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITV 170 (360)
Q Consensus 91 d~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta 170 (360)
|+|++.+. ..|+.|..|..|+. ....|+|++|+.++.+.++++|+++++++++ ++..+.+|
T Consensus 90 d~V~~~~~-~~~~~~~~~~~~~~-----------------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a 150 (341)
T cd08262 90 TRVTSLPL-LLCGQGASCGIGLS-----------------PEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVG 150 (341)
T ss_pred CEEEecCC-cCCCCChhhhCCCC-----------------cCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHH
Confidence 99988765 57999999943221 0246999999999999999999999998776 66788899
Q ss_pred hchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHH------H-
Q 018158 171 FCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQ------M- 242 (360)
Q Consensus 171 ~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~------~- 242 (360)
|+++ ...+ ++++++|+|+|+|++|.+++|+|+.+|++ ++++++++++.+.+++ +|++++++++.... .
T Consensus 151 ~~~~-~~~~--~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~ 226 (341)
T cd08262 151 LHAV-RRAR--LTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA-MGADIVVDPAADSPFAAWAAEL 226 (341)
T ss_pred HHHH-HhcC--CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-cCCcEEEcCCCcCHHHHHHHHH
Confidence 9886 4444 44999999998899999999999999997 6777778888888877 99988888665311 1
Q ss_pred H-hcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCC
Q 018158 243 Q-AGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYN 321 (360)
Q Consensus 243 ~-~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~ 321 (360)
. ..++++|++||++|....+..++++++++|+++.+|...............+++++.++.....+.++++++++.++.
T Consensus 227 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 306 (341)
T cd08262 227 ARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEGK 306 (341)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcCC
Confidence 1 125679999999987546788999999999999999764333333333345777877766666678899999999999
Q ss_pred Ccc--c-eEEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 322 ITC--N-IEVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 322 l~~--~-i~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+.+ . .+.|+++++++|++.+.+++..||+|++
T Consensus 307 i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 307 VDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred CChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 875 2 3899999999999999999988999974
No 76
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.5e-38 Score=293.64 Aligned_cols=333 Identities=24% Similarity=0.344 Sum_probs=277.3
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+++++...+.++.+.+.+.+.|++.+++|+|++.++++|++|++.+.|.+. ....|.++|||++|+|+++|++++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 3555554445667888988888889999999999999999999999888653 234577899999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.+ ...|+.|.+|..+.++.|+.. .+.| ....|++++|+.++.+.++++|+++++++++.+++.+.
T Consensus 81 ~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~g-----~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ 152 (342)
T cd08266 81 PGQRVVIYP-GISCGRCEYCLAGRENLCAQY--GILG-----EHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFL 152 (342)
T ss_pred CCCEEEEcc-ccccccchhhccccccccccc--cccc-----cccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHH
Confidence 999998754 447999999999999999863 2233 23568999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHh---
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQA--- 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~--- 244 (360)
+||+++.....+. ++++++|+|+ +.+|++++++++..|++|+++++++++++.+.. ++.+.+++..+.+....
T Consensus 153 ~a~~~l~~~~~~~--~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 229 (342)
T cd08266 153 TAWHMLVTRARLR--PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-LGADYVIDYRKEDFVREVRE 229 (342)
T ss_pred HHHHHHHHhcCCC--CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCeEEecCChHHHHHHHH
Confidence 9999987666554 9999999999 899999999999999999999999999998877 88877776655322211
Q ss_pred --cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCC
Q 018158 245 --GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYN 321 (360)
Q Consensus 245 --~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~ 321 (360)
.++++|+++++.|.. .+..++++++++|+++.+|..... ........+.++.++.+........+..+++++.++.
T Consensus 230 ~~~~~~~d~~i~~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 308 (342)
T cd08266 230 LTGKRGVDVVVEHVGAA-TWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGK 308 (342)
T ss_pred HhCCCCCcEEEECCcHH-HHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCC
Confidence 145799999999876 578899999999999999876532 2333434567888998888877888999999999998
Q ss_pred Cccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 322 ITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 322 l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+.+.+ +.|+++++++|++.+.++...+|+++++
T Consensus 309 l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 309 LKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred cccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 87765 8999999999999999888889999864
No 77
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=3.3e-39 Score=296.41 Aligned_cols=288 Identities=13% Similarity=0.171 Sum_probs=237.4
Q ss_pred cCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEecc
Q 018158 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97 (360)
Q Consensus 18 ~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 97 (360)
..++..+++++.+.|+|++|||||||+++++|+.|.. |.+.....|.++|+|++|+|+++|+ .|++||+|+.
T Consensus 13 ~~~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~-- 84 (325)
T TIGR02825 13 YPTDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLA-- 84 (325)
T ss_pred CCCCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEE--
Confidence 3566789999999999999999999999999997553 4333334578999999999999874 5999999974
Q ss_pred CccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEEC----CCCCCcccc-ccccchhhhhhc
Q 018158 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV----PENIAMDAA-APLLCAGITVFC 172 (360)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~i----P~~~~~~~a-a~l~~~~~ta~~ 172 (360)
.++|++|+.++.+.+.++ |++++++++ +++++.+.|||+
T Consensus 85 ------------------------------------~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~ 128 (325)
T TIGR02825 85 ------------------------------------SPGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYF 128 (325)
T ss_pred ------------------------------------ecCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHH
Confidence 146899999999988887 899999987 689999999999
Q ss_pred hhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH----HHhc-C
Q 018158 173 PMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ----MQAG-K 246 (360)
Q Consensus 173 ~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~----~~~~-~ 246 (360)
++.....++ +|++|||+|+ |++|++++|+||.+|++|+++++++++.+.+++ +|+++++++++.+. .... +
T Consensus 129 ~l~~~~~~~--~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~-lGa~~vi~~~~~~~~~~~~~~~~~ 205 (325)
T TIGR02825 129 GLLEICGVK--GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKK-LGFDVAFNYKTVKSLEETLKKASP 205 (325)
T ss_pred HHHHHhCCC--CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEEeccccccHHHHHHHhCC
Confidence 987666655 9999999998 999999999999999999999999999999988 99999998775311 1122 4
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-----Ccc--cChhhHhccCcEEEEeecCC------HHHHHHH
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-----PFE--LPSFPLIFGKRSVKGSMTGG------MRETQEM 313 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~--~~~~~~~~~~~~i~~~~~~~------~~~~~~~ 313 (360)
+++|++||++|+. .+..++++++++|+++.+|.... ... .....+..+++++.++.... .+.++++
T Consensus 206 ~gvdvv~d~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 284 (325)
T TIGR02825 206 DGYDCYFDNVGGE-FSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKEL 284 (325)
T ss_pred CCeEEEEECCCHH-HHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHH
Confidence 6899999999986 46899999999999999986532 121 12334566788888775421 3467889
Q ss_pred HHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 314 MNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 314 ~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
++++.++++++.+ ..|+++++++|++.+++++..||+|++
T Consensus 285 ~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 285 LKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHHCCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 9999999998766 789999999999999999989999974
No 78
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=1.7e-38 Score=293.97 Aligned_cols=326 Identities=23% Similarity=0.402 Sum_probs=266.0
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+|+++.- . +.+.+++.+.|++.++||+||+.++++|+.|+....+.+ ...+|.++|+|++|+|+.+|+++..|++
T Consensus 1 ~~a~~~~~--~-~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~-~~~~~~~~g~~~~G~V~~~g~~v~~~~~ 76 (343)
T cd08236 1 MKALVLTG--P-GDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHEFSGTVEEVGSGVDDLAV 76 (343)
T ss_pred CeeEEEec--C-CceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC-CCCCCcccCcceEEEEEEECCCCCcCCC
Confidence 34555532 2 478999999999999999999999999999999888765 3445788999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|++.+.. .|+.|.+|..++++.|+... +.| ....|+|++|+.++++.++++|+++++++++++ ..+.+
T Consensus 77 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~t 147 (343)
T cd08236 77 GDRVAVNPLL-PCGKCEYCKKGEYSLCSNYD--YIG-----SRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAV 147 (343)
T ss_pred CCEEEEcCCC-CCCCChhHHCcChhhCCCcc--eEe-----cccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHH
Confidence 9999875544 78999999999999998742 222 235799999999999999999999999998887 57789
Q ss_pred hhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHH--HHHhc-
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAM--QMQAG- 245 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~~- 245 (360)
||+++.. .. ++++++++|+|+|.+|++++|+|+.+|++ |+++++++++.+.+++ +|++.++++++.. .+...
T Consensus 148 a~~~l~~-~~--~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~ 223 (343)
T cd08236 148 ALHAVRL-AG--ITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARE-LGADDTINPKEEDVEKVRELT 223 (343)
T ss_pred HHHHHHh-cC--CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCCCEEecCccccHHHHHHHh
Confidence 9999864 34 44999999998899999999999999997 9999999999888877 9998888776543 22222
Q ss_pred -CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcc---cChhhHhccCcEEEEeecCC-----HHHHHHHHHH
Q 018158 246 -KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFE---LPSFPLIFGKRSVKGSMTGG-----MRETQEMMNV 316 (360)
Q Consensus 246 -~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~ 316 (360)
++++|++|||+|....+..++++++++|+++.+|....... .....++.++.++.++.... .+.++.++++
T Consensus 224 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (343)
T cd08236 224 EGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDL 303 (343)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHH
Confidence 45699999999876677899999999999999996654322 23334557788888776543 4567888899
Q ss_pred HhcCCCc--cce-EEECCccHHHHHHHHHc-CCCceeEEE
Q 018158 317 CGKYNIT--CNI-EVIKPDQINEALDRLAR-NDVRYRFVI 352 (360)
Q Consensus 317 l~~~~l~--~~i-~~~~~~~~~~a~~~~~~-~~~~gkvvi 352 (360)
+.++.+. +.+ +.+++++++++++.+.+ ++..||+|+
T Consensus 304 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 304 LASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred HHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 9999885 334 89999999999999998 666788874
No 79
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1e-39 Score=293.14 Aligned_cols=260 Identities=23% Similarity=0.321 Sum_probs=217.7
Q ss_pred ccccccceEEEEecCCCC------CCCCCCEEEeccCccCCCCChhhhCCCCCCccccccccccccc--CCCccccceee
Q 018158 68 VPGHEITGIITKVGSNVK------NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFW--DGSITYGGYSE 139 (360)
Q Consensus 68 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~--~~~~~~g~~~~ 139 (360)
++|||++|+|+++|++|+ +|++||||++.+. .+|+.|.+|+.|.++.|.+..+ .|... .+...+|+|+|
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~--~g~~~~~~~~~~~G~~ae 77 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVT-VPCGRCFRCRRGLPQKCDSLRK--YGHEALDSGWPLSGGYAE 77 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCC-CCCCCChhhhCcCcccCCChhh--cCcccccCCcccccccee
Confidence 579999999999999999 8999999987654 4799999999999999987432 12211 11235799999
Q ss_pred EEEeecc-eeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCC
Q 018158 140 MLVADYR-FVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTS 217 (360)
Q Consensus 140 ~~~v~~~-~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~ 217 (360)
|+.++++ +++++|+++++++++++++.+.|+|++++... ..++++|+|+|+|++|++++|+||.+|++ |++++++
T Consensus 78 y~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~---~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~ 154 (280)
T TIGR03366 78 HCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAG---DLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPS 154 (280)
T ss_pred eEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhcc---CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 9999997 79999999999999999999999999997765 34899999999999999999999999996 9999989
Q ss_pred hhHHHHHHHHcCCCeEeeCccHH-HHHh--cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC--CCcccChhhH
Q 018158 218 PSKEKEAKELLGADEFILSTNAM-QMQA--GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE--APFELPSFPL 292 (360)
Q Consensus 218 ~~~~~~~~~~~g~~~~v~~~~~~-~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~ 292 (360)
++|++.+++ +|++++++..+.. .... .+.++|++||++|....+..++++++++|+++.+|... ...+++...+
T Consensus 155 ~~r~~~a~~-~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~ 233 (280)
T TIGR03366 155 PDRRELALS-FGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQV 233 (280)
T ss_pred HHHHHHHHH-cCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHH
Confidence 999999988 9999988865532 1222 24679999999998878899999999999999999753 3456777888
Q ss_pred hccCcEEEEeecCCHHHHHHHHHHHhcC--CCc--cce-EEECCccH
Q 018158 293 IFGKRSVKGSMTGGMRETQEMMNVCGKY--NIT--CNI-EVIKPDQI 334 (360)
Q Consensus 293 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~--~l~--~~i-~~~~~~~~ 334 (360)
+.+++++.++.....++++++++++.++ ++. +.+ ++|+++++
T Consensus 234 ~~~~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 234 VRRWLTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred HhCCcEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 8999999999888888999999999974 443 345 88999874
No 80
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=9.3e-39 Score=295.88 Aligned_cols=294 Identities=14% Similarity=0.128 Sum_probs=228.6
Q ss_pred CCCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCC---CCCCCCCccccccceEEEEecCCCCCCCCCCEEEec
Q 018158 21 SGKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDW---GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96 (360)
Q Consensus 21 ~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 96 (360)
++.+++++.+.|+| ++|||||||++++||+.|........ ....+|.++|||++|+|+++|+++++|++||+|++
T Consensus 20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~- 98 (345)
T cd08293 20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTS- 98 (345)
T ss_pred ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEe-
Confidence 45788999999987 49999999999999999964332111 12346788999999999999999999999999974
Q ss_pred cCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccc----cccccchhhhhhc
Q 018158 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDA----AAPLLCAGITVFC 172 (360)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~----aa~l~~~~~ta~~ 172 (360)
..++|+||+.++++.++++|+++++.+ +++++.++.|||+
T Consensus 99 ------------------------------------~~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~ 142 (345)
T cd08293 99 ------------------------------------FNWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALI 142 (345)
T ss_pred ------------------------------------cCCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHH
Confidence 125799999999999999999864432 4567788999999
Q ss_pred hhhccCCCCCCCC--cEEEEEcC-ChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHhc
Q 018158 173 PMKDNNLIDSPAK--KRIGIVGL-GGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQAG 245 (360)
Q Consensus 173 ~l~~~~~~~~~~~--~~vlI~Ga-g~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~ 245 (360)
++.....++ +| ++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.+++.+|+++++++.+.+. ....
T Consensus 143 al~~~~~~~--~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~ 220 (345)
T cd08293 143 GIQEKGHIT--PGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLREL 220 (345)
T ss_pred HHHHhccCC--CCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHH
Confidence 997666554 66 99999999 9999999999999999 79999999999998877699999998776422 2222
Q ss_pred -CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC---Ccc----cCh--hhH-hccCcEEEEeecC-C----HHH
Q 018158 246 -KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA---PFE----LPS--FPL-IFGKRSVKGSMTG-G----MRE 309 (360)
Q Consensus 246 -~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~----~~~--~~~-~~~~~~i~~~~~~-~----~~~ 309 (360)
++++|++||++|+. .+..++++++++|+++.+|.... ... ... ..+ ..+++........ . .+.
T Consensus 221 ~~~gvd~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (345)
T cd08293 221 CPEGVDVYFDNVGGE-ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEA 299 (345)
T ss_pred CCCCceEEEECCCcH-HHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHH
Confidence 46899999999986 46899999999999999985321 111 111 111 1233333332211 1 234
Q ss_pred HHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 310 TQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 310 ~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++++++++.++.+++.. ..++++++++|++.+.+++..||+|+++
T Consensus 300 ~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 300 IAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 67778899999998765 5679999999999999999889999875
No 81
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=2.3e-38 Score=291.31 Aligned_cols=297 Identities=14% Similarity=0.131 Sum_probs=239.2
Q ss_pred cceeEEec-c-CCC--CCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCC
Q 018158 10 QSVVGWAA-H-DPS--GKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVK 85 (360)
Q Consensus 10 ~~~~~~~~-~-~~~--~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~ 85 (360)
|++.++.. + +.+ ..+++++.+.|+|+++||+|||++++||+.|.....+ ...+|.++|+|++|+|++ .++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~~ 76 (329)
T cd08294 3 AKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KNS 76 (329)
T ss_pred ceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CCC
Confidence 55555555 2 333 6799999999999999999999999999987653221 124578999999999985 456
Q ss_pred CCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc---eeEECCCCCCc-----
Q 018158 86 NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR---FVVHVPENIAM----- 157 (360)
Q Consensus 86 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~---~~~~iP~~~~~----- 157 (360)
.|++||+|+. .++|++|+.++.+ .++++|+++++
T Consensus 77 ~~~~Gd~V~~--------------------------------------~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~ 118 (329)
T cd08294 77 KFPVGTIVVA--------------------------------------SFGWRTHTVSDGKDQPDLYKLPADLPDDLPPS 118 (329)
T ss_pred CCCCCCEEEe--------------------------------------eCCeeeEEEECCccccceEECCccccccCChH
Confidence 7999999974 2578999999999 99999999982
Q ss_pred cccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeC
Q 018158 158 DAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILS 236 (360)
Q Consensus 158 ~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~ 236 (360)
..++++++.+.|||+++.....++ +|+++||+|+ |++|++++|+|+.+|++|+++++++++.+.+++ +|+++++++
T Consensus 119 ~~~a~~~~~~~ta~~al~~~~~~~--~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga~~vi~~ 195 (329)
T cd08294 119 LALGVLGMPGLTAYFGLLEICKPK--AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGFDAVFNY 195 (329)
T ss_pred HHHHhcccHHHHHHHHHHHhcCCC--CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEEeC
Confidence 223468889999999997766655 9999999998 999999999999999999999999999999999 999999988
Q ss_pred ccHHHH---Hh-cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--C--c---ccChhhHhccCcEEEEeecC
Q 018158 237 TNAMQM---QA-GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--P--F---ELPSFPLIFGKRSVKGSMTG 305 (360)
Q Consensus 237 ~~~~~~---~~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~--~---~~~~~~~~~~~~~i~~~~~~ 305 (360)
.+.+.. .. .++++|++||++|+. .+..++++++++|+++.+|.... . . ......+..+++++.++...
T Consensus 196 ~~~~~~~~v~~~~~~gvd~vld~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 274 (329)
T cd08294 196 KTVSLEEALKEAAPDGIDCYFDNVGGE-FSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVY 274 (329)
T ss_pred CCccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhh
Confidence 764322 22 256899999999985 67999999999999999985421 1 1 12233567788888887653
Q ss_pred CH-----HHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 306 GM-----RETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 306 ~~-----~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.. +.++.+++++.++++++.. ..|+++++++|++.+++++..||+|+++
T Consensus 275 ~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 275 RWQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred hhHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 32 3366788899999998754 7899999999999999999999999874
No 82
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=1.3e-37 Score=287.64 Aligned_cols=322 Identities=21% Similarity=0.277 Sum_probs=259.1
Q ss_pred cCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCC---CCCCCCCccccccceEEEEecCCCCCCCCCCEEE
Q 018158 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW---GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94 (360)
Q Consensus 18 ~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 94 (360)
..+...+++++.|.|+|+++||+||+.++++|++|+..+.+.. ....+|.++|+|++|+|+++|++++.|++||+|+
T Consensus 5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 3566789999999999999999999999999999998765532 1223566899999999999999999999999998
Q ss_pred eccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchh
Q 018158 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPM 174 (360)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l 174 (360)
+.+ ...|+.|..|..+.+++|...++ .|. ...|+|++|+.++++.++++|+++++++ ++++..+.+|++++
T Consensus 85 ~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~g~~~~~~~~~~~~~~~lp~~~~~~~-a~~~~~~~~a~~~~ 155 (340)
T TIGR00692 85 VET-HIVCGKCYACRRGQYHVCQNTKI--FGV-----DTDGCFAEYAVVPAQNIWKNPKSIPPEY-ATIQEPLGNAVHTV 155 (340)
T ss_pred ECC-cCCCCCChhhhCcChhhCcCcce--Eee-----cCCCcceeEEEeehHHcEECcCCCChHh-hhhcchHHHHHHHH
Confidence 754 45899999999999999998532 121 2568999999999999999999999865 45777888888876
Q ss_pred hccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHhc--CCC
Q 018158 175 KDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQAG--KRT 248 (360)
Q Consensus 175 ~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~--~~~ 248 (360)
. .... +|++++|.|+|++|++++|+|+.+|++ |+++++++++.+.+++ +|++.++++.+.+. .... +++
T Consensus 156 ~--~~~~--~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~l~~~~~~~~ 230 (340)
T TIGR00692 156 L--AGPI--SGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKK-MGATYVVNPFKEDVVKEVADLTDGEG 230 (340)
T ss_pred H--ccCC--CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCcEEEcccccCHHHHHHHhcCCCC
Confidence 2 2333 899999987799999999999999996 8888888888888877 99988887654322 2222 467
Q ss_pred cCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChh-hHhccCcEEEEeecC-CHHHHHHHHHHHhcCCCc--c
Q 018158 249 LDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSF-PLIFGKRSVKGSMTG-GMRETQEMMNVCGKYNIT--C 324 (360)
Q Consensus 249 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~~~l~--~ 324 (360)
+|+++|++|....+...+++++++|+++.+|........+.. .++.+++++.+.... ..+.+..+++++.++.++ +
T Consensus 231 ~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 310 (340)
T TIGR00692 231 VDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDP 310 (340)
T ss_pred CCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHH
Confidence 999999998766788999999999999999976443333333 456677777765432 235578888999999986 3
Q ss_pred ce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 325 NI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 325 ~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.+ +.+++++++++++.+.+++. ||+|+++
T Consensus 311 ~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 311 IITHKFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred heeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 34 89999999999999998875 9999875
No 83
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=6.8e-38 Score=289.02 Aligned_cols=304 Identities=19% Similarity=0.287 Sum_probs=245.1
Q ss_pred eeEEecc---CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCC
Q 018158 12 VVGWAAH---DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 12 ~~~~~~~---~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+++..+ +++..+++.++|.|+|+++||+|||+++++|++|+.++.|..+...+|.++|+|++|+|+++|++++.|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (336)
T TIGR02817 2 AVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFK 81 (336)
T ss_pred ceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCCC
Confidence 4455554 6678999999999999999999999999999999998888664455678899999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|+.... ....|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus 82 ~Gd~V~~~~~--------------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ 129 (336)
T TIGR02817 82 PGDEVWYAGD--------------------------------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSI 129 (336)
T ss_pred CCCEEEEcCC--------------------------------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHH
Confidence 9999985210 02358999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCC-----CcEEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCeEeeCccH--
Q 018158 169 TVFCPMKDNNLIDSPA-----KKRIGIVGL-GGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADEFILSTNA-- 239 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~-----~~~vlI~Ga-g~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-- 239 (360)
|||+++....+++ + |++++|+|+ |++|++++|+|+.+ |++|+++++++++.+.+++ +|+++++++...
T Consensus 130 ta~~~l~~~~~~~--~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~-~g~~~~~~~~~~~~ 206 (336)
T TIGR02817 130 TAWELLFDRLGIN--DPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLE-LGAHHVIDHSKPLK 206 (336)
T ss_pred HHHHHHHHhcCCC--CCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHH-cCCCEEEECCCCHH
Confidence 9999987666554 5 999999998 99999999999998 9999999999999999987 999999875442
Q ss_pred HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecC------C------
Q 018158 240 MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTG------G------ 306 (360)
Q Consensus 240 ~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~------~------ 306 (360)
..+... ++++|+++|+++........+++++++|+++.++.. ..++...+..++.++.+.... .
T Consensus 207 ~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (336)
T TIGR02817 207 AQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQ 283 (336)
T ss_pred HHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEEEEEeecccccchhhhhhh
Confidence 122222 467999999987655688999999999999988532 223333344444554432211 0
Q ss_pred HHHHHHHHHHHhcCCCccce-EEE---CCccHHHHHHHHHcCCCceeEEEe
Q 018158 307 MRETQEMMNVCGKYNITCNI-EVI---KPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 307 ~~~~~~~~~~l~~~~l~~~i-~~~---~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
...++++++++.++.+++.+ +.+ +++++++|++.+.+++..||+++.
T Consensus 284 ~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 284 HHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred HHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 13467888999999987654 555 468999999999999988999874
No 84
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=2.1e-37 Score=281.88 Aligned_cols=289 Identities=26% Similarity=0.397 Sum_probs=243.9
Q ss_pred CCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCc
Q 018158 20 PSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLA 99 (360)
Q Consensus 20 ~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 99 (360)
.++.+++++++.|++++++|+||+.++++|++|.+...|.+.....|.++|+|++|+|+++|++++.|++||+|++.+..
T Consensus 10 ~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 89 (306)
T cd08258 10 GPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTF 89 (306)
T ss_pred CCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCCCEEEEccCc
Confidence 34679999999999999999999999999999999888876444557889999999999999999999999999998878
Q ss_pred cCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCC
Q 018158 100 AACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNL 179 (360)
Q Consensus 100 ~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~ 179 (360)
..|+.|++|..+.++.|..... .| ....|+|++|+.++.+.++++|+++++++++ ++..+.+||+++.....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~ 161 (306)
T cd08258 90 STCGRCPYCRRGDYNLCPHRKG--IG-----TQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSG 161 (306)
T ss_pred CCCCCCcchhCcCcccCCCCce--ee-----ecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcC
Confidence 8999999999999999986421 12 2456999999999999999999999999876 77788899999877766
Q ss_pred CCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEe--CChhHHHHHHHHcCCCeEeeCccHHH---HHh--cCCCcCEE
Q 018158 180 IDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIS--TSPSKEKEAKELLGADEFILSTNAMQ---MQA--GKRTLDFI 252 (360)
Q Consensus 180 ~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~--~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~--~~~~~d~v 252 (360)
+. ++++++|.|+|.+|++++|+|+.+|++|++++ ++.++.+.+++ +|++++ ++...+. ... .++++|++
T Consensus 162 ~~--~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~l~~~~~~~~vd~v 237 (306)
T cd08258 162 IR--PGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKE-LGADAV-NGGEEDLAELVNEITDGDGADVV 237 (306)
T ss_pred CC--CCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHH-hCCccc-CCCcCCHHHHHHHHcCCCCCCEE
Confidence 55 99999998779999999999999999988774 34556777777 998877 6654322 221 14679999
Q ss_pred EEcCCCcccHHHHHHHhccCCEEEEeCCCC-CCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcC
Q 018158 253 LDTVSAKHSLGPILELLKVNGTLSVVGAPE-APFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKY 320 (360)
Q Consensus 253 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 320 (360)
||++|....+...+++++++|+++.+|... ....++...++.+++++.|+..+..++++++++++++|
T Consensus 238 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 306 (306)
T cd08258 238 IECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG 306 (306)
T ss_pred EECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhcC
Confidence 999987667889999999999999999865 24556677788899999999999999999999999875
No 85
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=4.4e-37 Score=284.13 Aligned_cols=322 Identities=21% Similarity=0.289 Sum_probs=256.9
Q ss_pred cCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCC---CCCCCCCccccccceEEEEecCCCCCCCCCCEEE
Q 018158 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW---GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94 (360)
Q Consensus 18 ~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 94 (360)
..+...+++.+.+.|+|.++|++||++++++|+.|+..+.+.. +....|.++|||++|+|+.+|+++..|++||+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~ 86 (341)
T cd05281 7 TKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGDYVS 86 (341)
T ss_pred ecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCCCCEEE
Confidence 4444579999999999999999999999999999998755421 1234567899999999999999999999999998
Q ss_pred eccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchh
Q 018158 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPM 174 (360)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l 174 (360)
+.+.. +|+.|.+|..+.+++|... ++.|. ...|+|++|+.++.+.++++|++++.++ ++++..+.++++++
T Consensus 87 ~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~g~~~~~v~v~~~~~~~lP~~~~~~~-a~~~~~~~~a~~~~ 157 (341)
T cd05281 87 AETHI-VCGKCYQCRTGNYHVCQNT--KILGV-----DTDGCFAEYVVVPEENLWKNDKDIPPEI-ASIQEPLGNAVHTV 157 (341)
T ss_pred ECCcc-CCCCChHHHCcCcccCccc--ceEec-----cCCCcceEEEEechHHcEECcCCCCHHH-hhhhhHHHHHHHHH
Confidence 87544 8999999999999999753 34442 3568999999999999999999999854 45666777778776
Q ss_pred hccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHH--HHhc--CCCc
Q 018158 175 KDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ--MQAG--KRTL 249 (360)
Q Consensus 175 ~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~--~~~~--~~~~ 249 (360)
.. . ..++++++|.|+|.+|++++|+|+.+|+ +|+++++++++.+.+++ +|.++++++.+.+. .... ++++
T Consensus 158 ~~--~--~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~v 232 (341)
T cd05281 158 LA--G--DVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKK-MGADVVINPREEDVVEVKSVTDGTGV 232 (341)
T ss_pred Hh--c--CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCcceeeCcccccHHHHHHHcCCCCC
Confidence 52 2 3489999998889999999999999999 69999888888888887 99988887654322 1211 4689
Q ss_pred CEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChh-hHhccCcEEEEeecCC-HHHHHHHHHHHhcCCCc--cc
Q 018158 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSF-PLIFGKRSVKGSMTGG-MRETQEMMNVCGKYNIT--CN 325 (360)
Q Consensus 250 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~~-~~~~~~~~~~l~~~~l~--~~ 325 (360)
|++||++|.......++++++++|+++.+|........... .+..+++.+.+..... .+.+..+++++.++.+. +.
T Consensus 233 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 312 (341)
T cd05281 233 DVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPV 312 (341)
T ss_pred CEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHh
Confidence 99999998876788999999999999999875543332322 3566777777765322 35677889999999885 33
Q ss_pred e-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 326 I-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 326 i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+ +.++++++++|++.+.+++ .||+|+++
T Consensus 313 ~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 313 ITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred eEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 4 7899999999999999998 89999864
No 86
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=3.8e-37 Score=283.02 Aligned_cols=306 Identities=20% Similarity=0.264 Sum_probs=250.1
Q ss_pred ccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCC
Q 018158 9 TQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 9 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
||+++++...+.++.+++++++.|+++++||+||+.++++|++|++...|.++....|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 58888887777888999999999999999999999999999999999888775445678899999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.. ...|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus 81 ~Gd~V~~~~----------------------------------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ 126 (327)
T PRK10754 81 VGDRVVYAQ----------------------------------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGL 126 (327)
T ss_pred CCCEEEECC----------------------------------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHH
Confidence 999997421 1348999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hh
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~ 244 (360)
+||.++.....++ +|++++|+|+ |.+|++++|+|+.+|++|+++++++++++.+++ +|++++++.++.+.. ..
T Consensus 127 ta~~~l~~~~~~~--~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 203 (327)
T PRK10754 127 TVYYLLRKTYEIK--PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKK-AGAWQVINYREENIVERVKE 203 (327)
T ss_pred HHHHHHHhhcCCC--CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-CCCCEEEcCCCCcHHHHHHH
Confidence 9999987766655 9999999987 999999999999999999999999999999977 999888876654222 22
Q ss_pred c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCc-ccChhhHhccCc------EEEEeecCCHH----HHH
Q 018158 245 G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPF-ELPSFPLIFGKR------SVKGSMTGGMR----ETQ 311 (360)
Q Consensus 245 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~------~i~~~~~~~~~----~~~ 311 (360)
. ++++|++|||+|.. .....+++++++|+++.+|...... .+....+..++. .+.+.. ...+ .+.
T Consensus 204 ~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 281 (327)
T PRK10754 204 ITGGKKVRVVYDSVGKD-TWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYI-TTREELTEASN 281 (327)
T ss_pred HcCCCCeEEEEECCcHH-HHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeeccc-CCHHHHHHHHH
Confidence 2 56799999999875 5788999999999999998765321 222222222221 122221 1222 245
Q ss_pred HHHHHHhcCCCccc---eEEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 312 EMMNVCGKYNITCN---IEVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 312 ~~~~~l~~~~l~~~---i~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
.+++++.++.+++. ++.|++++++++++.+.+++..||+|+.
T Consensus 282 ~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 282 ELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred HHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 67889999998753 4899999999999999999989999985
No 87
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.9e-36 Score=279.23 Aligned_cols=316 Identities=26% Similarity=0.427 Sum_probs=260.8
Q ss_pred CCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCcc
Q 018158 21 SGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAA 100 (360)
Q Consensus 21 ~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 100 (360)
++++.+.+.+.|++.++||+||++++++|+.|+....|.++ ..+|.++|+|++|+|+++|++++.|++||+|++.+..
T Consensus 9 ~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~-~~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~- 86 (334)
T cd08234 9 PGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG-AAPPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNI- 86 (334)
T ss_pred CCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCC-CCCCcccccceEEEEEEeCCCCCCCCCCCEEEEcCCc-
Confidence 35899999999999999999999999999999999888764 3377899999999999999999999999999876554
Q ss_pred CCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCC
Q 018158 101 ACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI 180 (360)
Q Consensus 101 ~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~ 180 (360)
.|+.|.+|..++.++|.... +.| ....|+|++|+.++.+.++++|+++++.+++.+ ..+.++++++ ....+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~ 157 (334)
T cd08234 87 YCGECFYCRRGRPNLCENLT--AVG-----VTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGI 157 (334)
T ss_pred CCCCCccccCcChhhCCCcc--eec-----cCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCC
Confidence 59999999999999998642 111 125699999999999999999999999988766 7778888888 44454
Q ss_pred CCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---HhcCCCcCEEEEcC
Q 018158 181 DSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQM---QAGKRTLDFILDTV 256 (360)
Q Consensus 181 ~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~~~~d~vid~~ 256 (360)
+ ++++++|+|+|.+|.+++++|+..|++ |+++++++++.+.+++ +|++.++++.+.+.. ...++++|++||++
T Consensus 158 ~--~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~vd~v~~~~ 234 (334)
T cd08234 158 K--PGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKK-LGATETVDPSREDPEAQKEDNPYGFDVVIEAT 234 (334)
T ss_pred C--CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCeEEecCCCCCHHHHHHhcCCCCcEEEECC
Confidence 4 999999998899999999999999997 8999999999998877 998888776554221 22357899999999
Q ss_pred CCcccHHHHHHHhccCCEEEEeCCCCC--CcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc---ceEEECC
Q 018158 257 SAKHSLGPILELLKVNGTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC---NIEVIKP 331 (360)
Q Consensus 257 g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~---~i~~~~~ 331 (360)
|....+..++++++++|+++.+|.... ...+....+..+++++.++... ...++.+++++.++++.+ ..+.|++
T Consensus 235 ~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 313 (334)
T cd08234 235 GVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN-PYTFPRAIALLESGKIDVKGLVSHRLPL 313 (334)
T ss_pred CChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC-HHHHHHHHHHHHcCCCChhhhEEEEecH
Confidence 876677899999999999999987543 3344444455577888776543 456888999999999864 2378999
Q ss_pred ccHHHHHHHHHcCCCceeEEE
Q 018158 332 DQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 332 ~~~~~a~~~~~~~~~~gkvvi 352 (360)
+++++|++.+.+ ...||+++
T Consensus 314 ~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 314 EEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHHHHHHhc-CCceEEEe
Confidence 999999999998 67789886
No 88
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=5.7e-37 Score=283.47 Aligned_cols=307 Identities=20% Similarity=0.287 Sum_probs=249.5
Q ss_pred cceeEEeccCCC-CCceEEEEeCCCCCC-CeEEEEEeeeecccchhhhhccCCCCC-C----CCCccccccceEEEEecC
Q 018158 10 QSVVGWAAHDPS-GKITPYIFKRRENGV-NDVTIKILYCGICHTDIHHVKNDWGIT-M----YPVVPGHEITGIITKVGS 82 (360)
Q Consensus 10 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~-~evlVkv~~~~i~~~D~~~~~g~~~~~-~----~p~~~G~e~~G~V~~vG~ 82 (360)
|+|.++...+.+ ..+.+++.|.|+|.+ ++|+||+.++++|++|+..+.|..+.. . .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 455555433322 258999999999887 999999999999999999988865322 2 567899999999999999
Q ss_pred CCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcccccc
Q 018158 83 NVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAP 162 (360)
Q Consensus 83 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~ 162 (360)
+++.|++||+|++.. ...|+|++|+.++.+.++++|+++++++++.
T Consensus 81 ~v~~~~~Gd~V~~~~----------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~ 126 (341)
T cd08290 81 GVKSLKPGDWVIPLR----------------------------------PGLGTWRTHAVVPADDLIKVPNDVDPEQAAT 126 (341)
T ss_pred CCCCCCCCCEEEecC----------------------------------CCCccchheEeccHHHeEeCCCCCCHHHHHH
Confidence 999999999998632 1249999999999999999999999999999
Q ss_pred ccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh----hHHHHHHHHcCCCeEeeCc
Q 018158 163 LLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP----SKEKEAKELLGADEFILST 237 (360)
Q Consensus 163 l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~----~~~~~~~~~~g~~~~v~~~ 237 (360)
+++.+.|||+++.....++ ++++++|+|+ |++|++++|+|+..|++|+++++++ ++++.+++ +|+++++++.
T Consensus 127 ~~~~~~ta~~~l~~~~~~~--~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~ 203 (341)
T cd08290 127 LSVNPCTAYRLLEDFVKLQ--PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKA-LGADHVLTEE 203 (341)
T ss_pred hhccHHHHHHHHHhhcccC--CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHh-cCCCEEEeCc
Confidence 9999999999997766655 9999999998 9999999999999999998888776 66788877 9999998876
Q ss_pred cH---HH---HHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCCH--
Q 018158 238 NA---MQ---MQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGGM-- 307 (360)
Q Consensus 238 ~~---~~---~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~~-- 307 (360)
+. .. .... .+++|++|||+|.. .+...+++++++|+++.+|.... ...++...++.++.++.+......
T Consensus 204 ~~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (341)
T cd08290 204 ELRSLLATELLKSAPGGRPKLALNCVGGK-SATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLK 282 (341)
T ss_pred ccccccHHHHHHHHcCCCceEEEECcCcH-hHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHh
Confidence 53 22 1111 22799999999986 46788999999999999986432 334455456778888888765321
Q ss_pred --------HHHHHHHHHHhcCCCccce-EEE---CCccHHHHHHHHHcCCCceeEEEec
Q 018158 308 --------RETQEMMNVCGKYNITCNI-EVI---KPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 308 --------~~~~~~~~~l~~~~l~~~i-~~~---~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
..+..+++++.++.+.+.. +.+ +++++++|++.+.+++..||+|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 283 RANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred hcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 2467788899999987654 677 9999999999999998889999874
No 89
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=1.7e-36 Score=278.29 Aligned_cols=312 Identities=22% Similarity=0.285 Sum_probs=246.0
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+|.++...++..++++++.|.|.++++||+||+.++++|++|+..+.|.++. ..+|.++|||++|+|+++ +++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 45566655554458999999999999999999999999999999998886532 335778999999999999 457899
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.+. + .|...+|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus 79 ~Gd~V~~~~~------------------------~-----~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ 129 (325)
T cd05280 79 EGDEVLVTGY------------------------D-----LGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGF 129 (325)
T ss_pred CCCEEEEccc------------------------c-----cCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHH
Confidence 9999986321 0 1113469999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCC-CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH--HHHh
Q 018158 169 TVFCPMKDNNLIDSPA-KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM--QMQA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~-~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~ 244 (360)
+||+++..+.+..+.+ +++++|+|+ |++|++++|+|+.+|++|+++++++++++.+++ +|++++++.++.. ....
T Consensus 130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~ 208 (325)
T cd05280 130 TAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKS-LGASEVLDREDLLDESKKP 208 (325)
T ss_pred HHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcEEEcchhHHHHHHHH
Confidence 9999987655432233 579999999 999999999999999999999999999999987 9999888776532 1111
Q ss_pred -cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCC--H----HHHHHHHHH
Q 018158 245 -GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGG--M----RETQEMMNV 316 (360)
Q Consensus 245 -~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~--~----~~~~~~~~~ 316 (360)
..+++|++||++|.. .+..++++++++|+++.+|.... ...+....++.++.++.+..... . +.++.+.++
T Consensus 209 ~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (325)
T cd05280 209 LLKARWAGAIDTVGGD-VLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATE 287 (325)
T ss_pred hcCCCccEEEECCchH-HHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHH
Confidence 245799999999985 67999999999999999987542 22344444556888888765432 1 223344444
Q ss_pred HhcCCCccceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 317 CGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 317 l~~~~l~~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+..+.....+++|+++++++|++.+.+++..||+|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 288 WKPDLLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred HhcCCccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 55554344458999999999999999999999999864
No 90
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=2.7e-36 Score=276.87 Aligned_cols=307 Identities=20% Similarity=0.225 Sum_probs=249.7
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC---CCCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG---ITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|++..+...+....+.+.+.+.|.+.+++|+|++.++++|++|++...|..+ ....|.++|||++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 3555554334456788888887778999999999999999999998877542 2345678999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
|++||+|++... ...|+|++|+.++.+.++++|+++++++++.+++.
T Consensus 81 ~~~Gd~V~~~~~---------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~ 127 (324)
T cd08244 81 AWLGRRVVAHTG---------------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHD 127 (324)
T ss_pred CCCCCEEEEccC---------------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcch
Confidence 999999986310 13699999999999999999999999999999999
Q ss_pred hhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---
Q 018158 167 GITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM--- 242 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~--- 242 (360)
+.|||..+ ....++ ++++++|+|+ |++|++++++|+.+|++|+++++++++.+.+++ +|+++++++.+.+..
T Consensus 128 ~~ta~~~~-~~~~~~--~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~ 203 (324)
T cd08244 128 GRTALGLL-DLATLT--PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRA-LGADVAVDYTRPDWPDQV 203 (324)
T ss_pred HHHHHHHH-HhcCCC--CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCCEEEecCCccHHHHH
Confidence 99996544 444444 9999999997 999999999999999999999999999999977 999888877654222
Q ss_pred Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecCC------HHHHHHH
Q 018158 243 QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTGG------MRETQEM 313 (360)
Q Consensus 243 ~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~ 313 (360)
... ++++|+++|++|... ...++++++.+|+++.+|..... ..++...++.++.++.++.... .+.++.+
T Consensus 204 ~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (324)
T cd08244 204 REALGGGGVTVVLDGVGGAI-GRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARA 282 (324)
T ss_pred HHHcCCCCceEEEECCChHh-HHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHH
Confidence 211 467999999999874 58899999999999999876432 2444445567888888765533 2456778
Q ss_pred HHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 314 MNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 314 ~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++++.++.+.+.+ +.|+++++++|++.+.++...||+++++
T Consensus 283 ~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 283 LAEAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred HHHHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 8899999887655 8999999999999999999899999864
No 91
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.1e-36 Score=278.62 Aligned_cols=310 Identities=22% Similarity=0.267 Sum_probs=256.4
Q ss_pred ccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCC
Q 018158 9 TQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNF 87 (360)
Q Consensus 9 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 87 (360)
||||.++...+....+.+++.+.|++.++||+||+.++++|+.|+....|.++ ....|.++|||++|+|+++|++++.+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 47888776666556788888888889999999999999999999998887653 23446789999999999999999999
Q ss_pred CCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchh
Q 018158 88 KVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 88 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~ 167 (360)
++||+|+.. ..+|+|++|+.++.+.++++|+++++.+++.+++.+
T Consensus 81 ~~Gd~V~~~-----------------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~ 125 (334)
T PTZ00354 81 KEGDRVMAL-----------------------------------LPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAF 125 (334)
T ss_pred CCCCEEEEe-----------------------------------cCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHH
Confidence 999999752 135899999999999999999999999999999999
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH-HH---
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM-QM--- 242 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~-~~--- 242 (360)
.+||+++......+ ++++++|+|+ |++|++++++|+.+|++++++.+++++++.+++ +|.+++++....+ ..
T Consensus 126 ~ta~~~l~~~~~~~--~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~ 202 (334)
T PTZ00354 126 LTAWQLLKKHGDVK--KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKK-LAAIILIRYPDEEGFAPKV 202 (334)
T ss_pred HHHHHHHHHhcCCC--CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEecCChhHHHHHH
Confidence 99999998766655 9999999998 999999999999999998889999999999977 9998888876543 22
Q ss_pred Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-Ccc-cChhhHhccCcEEEEeecCCH----------H
Q 018158 243 QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFE-LPSFPLIFGKRSVKGSMTGGM----------R 308 (360)
Q Consensus 243 ~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~-~~~~~~~~~~~~i~~~~~~~~----------~ 308 (360)
... ++++|++||+.+.. .+..++++++++|+++.+|...+ ... +....+..+..++.++..... +
T Consensus 203 ~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (334)
T PTZ00354 203 KKLTGEKGVNLVLDCVGGS-YLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVAS 281 (334)
T ss_pred HHHhCCCCceEEEECCchH-HHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHH
Confidence 111 46799999999865 67899999999999999986542 222 555556667778887654331 2
Q ss_pred HHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEecCCC
Q 018158 309 ETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIAGG 357 (360)
Q Consensus 309 ~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~ 357 (360)
.++.+++++.++.+.+.+ +.+++++++++++.+.+++..||+++++.++
T Consensus 282 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~~ 331 (334)
T PTZ00354 282 FEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNEP 331 (334)
T ss_pred HHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence 246677888899887655 8999999999999999888889999988664
No 92
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.4e-36 Score=274.84 Aligned_cols=295 Identities=19% Similarity=0.317 Sum_probs=245.7
Q ss_pred ceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCC
Q 018158 11 SVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVG 90 (360)
Q Consensus 11 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 90 (360)
|+.++.-.+ +..+++++.+.|.++++||+||+.++++|+.|++...+. ..+.++|||++|+|+++|+.++.|++|
T Consensus 2 ~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~G 76 (305)
T cd08270 2 RALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAVG 76 (305)
T ss_pred eEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCCC
Confidence 444453333 567888899999999999999999999999999876532 236789999999999999999999999
Q ss_pred CEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhh
Q 018158 91 DRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITV 170 (360)
Q Consensus 91 d~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta 170 (360)
|+|++. ...|+|++|+.++.+.++++|+++++++++++++.+.+|
T Consensus 77 d~V~~~-----------------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta 121 (305)
T cd08270 77 ARVVGL-----------------------------------GAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTA 121 (305)
T ss_pred CEEEEe-----------------------------------cCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHH
Confidence 999852 125999999999999999999999999999999999999
Q ss_pred hchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCc
Q 018158 171 FCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTL 249 (360)
Q Consensus 171 ~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~ 249 (360)
|+++..... .+|++++|+|+ |++|++++++++..|++|+.+++++++++.+++ +|++..++.... . ..+++
T Consensus 122 ~~~~~~~~~---~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~--~--~~~~~ 193 (305)
T cd08270 122 LRALRRGGP---LLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LGAAEVVVGGSE--L--SGAPV 193 (305)
T ss_pred HHHHHHhCC---CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEecccc--c--cCCCc
Confidence 999987763 26999999999 999999999999999999999999999999998 998766543321 1 23579
Q ss_pred CEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhc--cCcEEEEeecCC----HHHHHHHHHHHhcCCC
Q 018158 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIF--GKRSVKGSMTGG----MRETQEMMNVCGKYNI 322 (360)
Q Consensus 250 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~--~~~~i~~~~~~~----~~~~~~~~~~l~~~~l 322 (360)
|+++|++|.. .+..++++++.+|+++.+|.... ...++...+.. ++.++.++.... .+.+..+++++.++++
T Consensus 194 d~vl~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 272 (305)
T cd08270 194 DLVVDSVGGP-QLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRL 272 (305)
T ss_pred eEEEECCCcH-HHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCc
Confidence 9999999986 57899999999999999987542 22344444444 578888776653 3567888899999999
Q ss_pred ccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 323 TCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 323 ~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++.+ +.++++++++|++.+.+++..||+++++
T Consensus 273 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 273 DPRIGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred cceeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 8765 8999999999999999999889999875
No 93
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8e-36 Score=274.96 Aligned_cols=327 Identities=21% Similarity=0.273 Sum_probs=267.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+|.++...+....+++++.+.|.++++|++|++.++++|++|++...|.++ ....|.++|||++|+|+++|+.+..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 4566665555557899988888889999999999999999999999887653 234577899999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.... .|..+.+..|... .+.| ....|+|++|+.++.+.++++|+++++.+++.+++.+.
T Consensus 81 ~Gd~V~~~~~~-------~~~~~~~~~~~~~--~~~~-----~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ 146 (336)
T cd08276 81 VGDRVVPTFFP-------NWLDGPPTAEDEA--SALG-----GPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGL 146 (336)
T ss_pred CCCEEEEeccc-------ccccccccccccc--cccc-----cccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHH
Confidence 99999874432 2344444455321 1222 23478999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc-H---HHHHh
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN-A---MQMQA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~---~~~~~ 244 (360)
+||+++.....+. +|++++|+|+|++|++++++++..|++|+++++++++++.+.+ +|.+++++... . .....
T Consensus 147 ~a~~~l~~~~~~~--~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 223 (336)
T cd08276 147 TAWNALFGLGPLK--PGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLERAKA-LGADHVINYRTTPDWGEEVLK 223 (336)
T ss_pred HHHHHHHhhcCCC--CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEEcCCcccCHHHHHHH
Confidence 9999998776655 9999999977999999999999999999999999999999988 89988887655 2 11222
Q ss_pred c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCC
Q 018158 245 G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYN 321 (360)
Q Consensus 245 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~ 321 (360)
. ++++|+++|+++.. ....++++++++|+++.+|..... .......++.+++++.+........++++++++.++.
T Consensus 224 ~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (336)
T cd08276 224 LTGGRGVDHVVEVGGPG-TLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHR 302 (336)
T ss_pred HcCCCCCcEEEECCChH-HHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCC
Confidence 2 46899999999865 578999999999999999876532 2344556678899999988777778899999999888
Q ss_pred Cccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 322 ITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 322 l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+.+.. +.|++++++++++.+.+++..+|+++++
T Consensus 303 l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 303 IRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred cccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 87654 8999999999999999988889999863
No 94
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=5.2e-36 Score=274.98 Aligned_cols=310 Identities=23% Similarity=0.306 Sum_probs=247.1
Q ss_pred eeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCCCCCCC
Q 018158 12 VVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNFKVG 90 (360)
Q Consensus 12 ~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~G 90 (360)
|.++..++++..++++++|.|.++++||+||++++++|++|++.+.|.++. ...|.++|||++|+|+. +++..|++|
T Consensus 2 a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~G 79 (323)
T TIGR02823 2 ALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFREG 79 (323)
T ss_pred eEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCCC
Confidence 455555676678999999999999999999999999999999998887632 34578899999999998 566789999
Q ss_pred CEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhh
Q 018158 91 DRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITV 170 (360)
Q Consensus 91 d~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta 170 (360)
|+|++.+.. .+....|++++|+.++.+.++++|+++++++++.+++.+.+|
T Consensus 80 d~V~~~~~~-----------------------------~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta 130 (323)
T TIGR02823 80 DEVIVTGYG-----------------------------LGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTA 130 (323)
T ss_pred CEEEEccCC-----------------------------CCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHH
Confidence 999863210 011246899999999999999999999999999999999999
Q ss_pred hchhhccCCCCCCCCc-EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH-HHhc-C
Q 018158 171 FCPMKDNNLIDSPAKK-RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ-MQAG-K 246 (360)
Q Consensus 171 ~~~l~~~~~~~~~~~~-~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~-~~~~-~ 246 (360)
|.++..+.+..+.+++ +++|+|+ |++|++++|+|+.+|++|+++++++++++.+++ +|++++++..+... .... .
T Consensus 131 ~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 209 (323)
T TIGR02823 131 ALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKE-LGASEVIDREDLSPPGKPLEK 209 (323)
T ss_pred HHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHh-cCCcEEEccccHHHHHHHhcC
Confidence 8887655432234888 9999999 999999999999999999999888888888877 99988887765432 2222 3
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecC--CH----HHHHHHHHHHhc
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTG--GM----RETQEMMNVCGK 319 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~--~~----~~~~~~~~~l~~ 319 (360)
.++|.++||+|.. .+..++++++++|+++.+|.... ........++.++.++.+.... .. +.+..+.+++..
T Consensus 210 ~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (323)
T TIGR02823 210 ERWAGAVDTVGGH-TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKP 288 (323)
T ss_pred CCceEEEECccHH-HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhc
Confidence 4599999999976 57899999999999999997642 2233334555788888876442 11 224555666777
Q ss_pred CCCccceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 320 YNITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 320 ~~l~~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+.+.+.++.|+++++++|++.+.+++..||+|+++
T Consensus 289 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 289 RNLESITREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred CCCcCceeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 87766568999999999999999999899999864
No 95
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=5.5e-36 Score=275.51 Aligned_cols=301 Identities=23% Similarity=0.323 Sum_probs=250.9
Q ss_pred cceeEEeccCC--CCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHDP--SGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~~--~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|+++++...++ ++.+++++.+.|.+.++||+||+.++++|++|++...|.+. ...+|.++|||++|+|+.+|++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~ 81 (329)
T cd08250 2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTD 81 (329)
T ss_pred ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCC
Confidence 77888877777 88999999999999999999999999999999998888663 2457889999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
+++||+|++ ...|+|++|+.++.+.++++|++ ..+++.+++.
T Consensus 82 ~~~Gd~V~~------------------------------------~~~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~ 123 (329)
T cd08250 82 FKVGDAVAT------------------------------------MSFGAFAEYQVVPARHAVPVPEL--KPEVLPLLVS 123 (329)
T ss_pred CCCCCEEEE------------------------------------ecCcceeEEEEechHHeEECCCC--cchhhhcccH
Confidence 999999986 23589999999999999999997 3567889999
Q ss_pred hhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---H
Q 018158 167 GITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---M 242 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~ 242 (360)
+.+||+++.....++ ++++++|+|+ |.+|++++|+|+..|++|+++++++++.+.+++ +|++.+++..+.+. .
T Consensus 124 ~~ta~~~l~~~~~~~--~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~ 200 (329)
T cd08250 124 GLTASIALEEVGEMK--SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS-LGCDRPINYKTEDLGEVL 200 (329)
T ss_pred HHHHHHHHHHhcCCC--CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHH-cCCceEEeCCCccHHHHH
Confidence 999999998776655 9999999998 999999999999999999999999999999977 99888877654322 1
Q ss_pred H-hcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-----------cccChhhHhccCcEEEEeecCC----
Q 018158 243 Q-AGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-----------FELPSFPLIFGKRSVKGSMTGG---- 306 (360)
Q Consensus 243 ~-~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~~~~~~~~i~~~~~~~---- 306 (360)
. ..++++|++||++|.. .+..++++++++|+++.+|..... ..++ ...+.++.++.++....
T Consensus 201 ~~~~~~~vd~v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 278 (329)
T cd08250 201 KKEYPKGVDVVYESVGGE-MFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAKL 278 (329)
T ss_pred HHhcCCCCeEEEECCcHH-HHHHHHHHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHHH
Confidence 1 1256799999999874 678999999999999999875421 1111 23456778888876542
Q ss_pred -HHHHHHHHHHHhcCCCccc---eEEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 307 -MRETQEMMNVCGKYNITCN---IEVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 307 -~~~~~~~~~~l~~~~l~~~---i~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
.+.+.++++++.++.+.+. ++.++++++++|++.+.+++..||++++
T Consensus 279 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 279 IPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 3456788889999988763 2569999999999999998888899874
No 96
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2e-36 Score=274.99 Aligned_cols=306 Identities=21% Similarity=0.263 Sum_probs=233.2
Q ss_pred ceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCC----CCCCccccccceEEEEecCC---
Q 018158 11 SVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGIT----MYPVVPGHEITGIITKVGSN--- 83 (360)
Q Consensus 11 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~----~~p~~~G~e~~G~V~~vG~~--- 83 (360)
........++......++.++|.|.+++++|++.++++|+.|+++..|.+.+. .+|.++++++.|++..+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~ 86 (347)
T KOG1198|consen 7 RVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDD 86 (347)
T ss_pred eEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccc
Confidence 33333334555555666799999999999999999999999999999987543 35655555555553333322
Q ss_pred -CCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcccccc
Q 018158 84 -VKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAP 162 (360)
Q Consensus 84 -v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~ 162 (360)
+..+..||++.. ....|+|+||+++|+..++++|++++++++|+
T Consensus 87 ~~~~~~~g~~~~~-----------------------------------~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~ 131 (347)
T KOG1198|consen 87 VVGGWVHGDAVVA-----------------------------------FLSSGGLAEYVVVPEKLLVKIPESLSFEEAAA 131 (347)
T ss_pred cccceEeeeEEee-----------------------------------ccCCCceeeEEEcchhhccCCCCccChhhhhc
Confidence 233555554432 25679999999999999999999999999999
Q ss_pred ccchhhhhhchhhccC------CCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEee
Q 018158 163 LLCAGITVFCPMKDNN------LIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 163 l~~~~~ta~~~l~~~~------~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
+|.++.|||.++.... +.+ +|++|||+|+ |++|++++|+|+..|+..++++.++++.+++++ +|+++++|
T Consensus 132 ~p~~~~tA~~al~~~~~~~~~~~~~--~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~-lGAd~vvd 208 (347)
T KOG1198|consen 132 LPLAALTALSALFQLAPGKRSKKLS--KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKK-LGADEVVD 208 (347)
T ss_pred CchHHHHHHHHHHhccccccccccC--CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHH-cCCcEeec
Confidence 9999999999999888 765 9999999988 999999999999999655555558899999999 99999999
Q ss_pred CccHHHHHhc----CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC---CcccC-hh---------hHhccCcE
Q 018158 236 STNAMQMQAG----KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA---PFELP-SF---------PLIFGKRS 298 (360)
Q Consensus 236 ~~~~~~~~~~----~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~~-~~---------~~~~~~~~ 298 (360)
|++.+..+.. +.+||+||||+|+. .......++...|+...++...+ ..... .. ....++..
T Consensus 209 y~~~~~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (347)
T KOG1198|consen 209 YKDENVVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVN 287 (347)
T ss_pred CCCHHHHHHHHhhcCCCccEEEECCCCC-ccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccc
Confidence 9997554433 56899999999986 35677788887776555544331 11111 00 00011111
Q ss_pred -EEEeecCCHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 299 -VKGSMTGGMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 299 -i~~~~~~~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
..+......+.++.+.++++++++++++ +.||++++.+|++.+.+++..||+++.++
T Consensus 288 ~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 288 YRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred eeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 1222334567789999999999999998 99999999999999999999999999875
No 97
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=7.6e-36 Score=273.76 Aligned_cols=292 Identities=21% Similarity=0.278 Sum_probs=246.2
Q ss_pred CceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccC
Q 018158 23 KITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAA 101 (360)
Q Consensus 23 ~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 101 (360)
++.+++.+.|++++++|+||++++++|+.|...+.+.+. ...+|.++|||++|+|+++|++++.+++||+|++.+
T Consensus 13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~---- 88 (323)
T cd05282 13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG---- 88 (323)
T ss_pred eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC----
Confidence 788889999999999999999999999999998877653 234577899999999999999999999999998621
Q ss_pred CCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCC
Q 018158 102 CMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLID 181 (360)
Q Consensus 102 ~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~ 181 (360)
..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.......
T Consensus 89 -------------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~ 137 (323)
T cd05282 89 -------------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLP 137 (323)
T ss_pred -------------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCC
Confidence 1589999999999999999999999999999999999999988777655
Q ss_pred CCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHh---c--CCCcCEEEEc
Q 018158 182 SPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQA---G--KRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---~--~~~~d~vid~ 255 (360)
++++++|+|+ |.+|++++|+|+.+|++|+++.+++++++.+++ +|+++++++.+...... . ++++|+++||
T Consensus 138 --~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~ 214 (323)
T cd05282 138 --PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKA-LGADEVIDSSPEDLAQRVKEATGGAGARLALDA 214 (323)
T ss_pred --CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHh-cCCCEEecccchhHHHHHHHHhcCCCceEEEEC
Confidence 9999999999 999999999999999999999999999999977 99999988776433222 1 5689999999
Q ss_pred CCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecCCH----------HHHHHHHHHHhcCCCcc
Q 018158 256 VSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTGGM----------RETQEMMNVCGKYNITC 324 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~l~~~~l~~ 324 (360)
+|+.. ....+++++++|+++.+|..... ..++...+..++.++.+...... +.++.+++++.++.+.+
T Consensus 215 ~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 293 (323)
T cd05282 215 VGGES-ATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTT 293 (323)
T ss_pred CCCHH-HHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCccc
Confidence 99875 57889999999999999876532 34444455557888887655321 34677888999999876
Q ss_pred ce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 325 NI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 325 ~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
.. +.|+++++++|++.+.+++..||++++
T Consensus 294 ~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 294 PVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred CccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 65 899999999999999998888999874
No 98
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=7.9e-36 Score=274.07 Aligned_cols=312 Identities=22% Similarity=0.294 Sum_probs=241.4
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCC-CCCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW-GITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+|.++...+++..+.+++.+.|.++++||+||+.++++|++|.....+.. ....+|.++|||++|+|+++| ++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 566677666655679999999999999999999999999999987665322 123457889999999999964 57899
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.+.. .|....|+|++|+.++++.++++|+++++++++.+++.+.
T Consensus 79 ~Gd~V~~~~~~-----------------------------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ 129 (326)
T cd08289 79 PGDEVIVTSYD-----------------------------LGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGF 129 (326)
T ss_pred CCCEEEEcccc-----------------------------cCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHH
Confidence 99999863210 1113469999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCC-CCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH--HHHh
Q 018158 169 TVFCPMKDNNLIDS-PAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM--QMQA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~-~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~ 244 (360)
|||.++..+.+... ..+++++|+|+ |++|++++|+|+.+|++|+++++++++++.+++ +|++++++.++.. ....
T Consensus 130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~ 208 (326)
T cd08289 130 TAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKK-LGAKEVIPREELQEESIKP 208 (326)
T ss_pred HHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-cCCCEEEcchhHHHHHHHh
Confidence 99988865433111 24789999999 999999999999999999999999999999987 9998888776541 1122
Q ss_pred c-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCC--HHHHHHHHHHHhc-
Q 018158 245 G-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGG--MRETQEMMNVCGK- 319 (360)
Q Consensus 245 ~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~l~~- 319 (360)
. ++++|++||++|.. .+..++++++++|+++.+|.... ..+.....++.++.++.+..... ......+++.+.+
T Consensus 209 ~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (326)
T cd08289 209 LEKQRWAGAVDPVGGK-TLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATD 287 (326)
T ss_pred hccCCcCEEEECCcHH-HHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhh
Confidence 2 46799999999985 67999999999999999997642 23333555667888888874321 1222333333322
Q ss_pred ---CCCccc-eEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 320 ---YNITCN-IEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 320 ---~~l~~~-i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
..+... .++|+++++++|++.+.+++..||+++++
T Consensus 288 ~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 288 LKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred cCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 222233 48999999999999999999999999864
No 99
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=9.7e-36 Score=274.90 Aligned_cols=313 Identities=22% Similarity=0.249 Sum_probs=242.7
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+|+++...+ ++++++++++.|+++++||+||++++++|++|++...+.+ ....|.++|||++|+|+.+|++++.|++
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 78 (339)
T cd08249 1 QKAAVLTGPG-GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKV 78 (339)
T ss_pred CceEEeccCC-CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCC
Confidence 4555554444 5889999999999999999999999999999998876654 2335678999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|++.+... |+ +...+|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~~-~~--------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~t 131 (339)
T cd08249 79 GDRVAGFVHGG-NP--------------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVT 131 (339)
T ss_pred CCEEEEEeccc-cC--------------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHH
Confidence 99998743210 00 0134699999999999999999999999999999999999
Q ss_pred hhchhhccCCC--------CCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 170 VFCPMKDNNLI--------DSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 170 a~~~l~~~~~~--------~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
||+++....+. +..++++++|+|+ |++|++++++|+.+|++|+.+. ++++++.+++ +|+++++++.+.+
T Consensus 132 a~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~~-~g~~~v~~~~~~~ 209 (339)
T cd08249 132 AALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVKS-LGADAVFDYHDPD 209 (339)
T ss_pred HHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHHh-cCCCEEEECCCch
Confidence 99998765433 1248999999998 9999999999999999999888 5688888877 9999998876543
Q ss_pred HH---Hh-cCCCcCEEEEcCCCcccHHHHHHHhcc--CCEEEEeCCCCCCcccChhhHhccCcEEEEee-------cCCH
Q 018158 241 QM---QA-GKRTLDFILDTVSAKHSLGPILELLKV--NGTLSVVGAPEAPFELPSFPLIFGKRSVKGSM-------TGGM 307 (360)
Q Consensus 241 ~~---~~-~~~~~d~vid~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~-------~~~~ 307 (360)
.. .. .++++|++||++|....+..+++++++ +|+++.+|......... .............. ....
T Consensus 210 ~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (339)
T cd08249 210 VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPR-KGVKVKFVLGYTVFGEIPEDREFGE 288 (339)
T ss_pred HHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccCC-CCceEEEEEeeeecccccccccchH
Confidence 22 22 256799999999985578999999999 99999998765322111 11111111111110 0112
Q ss_pred HHHHHHHHHHhcCCCccce-EEEC--CccHHHHHHHHHcCC-CceeEEEec
Q 018158 308 RETQEMMNVCGKYNITCNI-EVIK--PDQINEALDRLARND-VRYRFVIDI 354 (360)
Q Consensus 308 ~~~~~~~~~l~~~~l~~~i-~~~~--~~~~~~a~~~~~~~~-~~gkvvi~~ 354 (360)
..+..+++++.++++.+.. ..++ ++++++|++.+.+++ ..+|+|+++
T Consensus 289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 289 VFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 4567788899999987654 7788 999999999999988 889999874
No 100
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.5e-35 Score=268.77 Aligned_cols=308 Identities=21% Similarity=0.239 Sum_probs=246.0
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+++.+.-.+....+.+++.+.|.+.++||+||++++++|++|++...+.++....|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 3455554334445788888888889999999999999999999999888765455678899999999999995 57999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|++.... .+....|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~-----------------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t 129 (320)
T cd08243 79 GQRVATAMGG-----------------------------MGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYT 129 (320)
T ss_pred CCEEEEecCC-----------------------------CCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHH
Confidence 9999863210 01124589999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH--HHHHhcC
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA--MQMQAGK 246 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~~~ 246 (360)
||+++......+ +|++++|+|+ |.+|++++|+|+.+|++|+++++++++.+.+++ +|++++++.... ......+
T Consensus 130 a~~~l~~~~~~~--~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~i~~~~ 206 (320)
T cd08243 130 AWGSLFRSLGLQ--PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKE-LGADEVVIDDGAIAEQLRAAP 206 (320)
T ss_pred HHHHHHHhcCCC--CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcEEEecCccHHHHHHHhC
Confidence 999998877655 9999999999 999999999999999999999999999999977 999887654321 1222226
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcc---cChhhH--hccCcEEEEeecCC--HHHHHHHHHHHhc
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFE---LPSFPL--IFGKRSVKGSMTGG--MRETQEMMNVCGK 319 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~--~~~~~~i~~~~~~~--~~~~~~~~~~l~~ 319 (360)
+++|+++|++|+. .+..++++++++|+++.+|...+... .....+ ..+++.+.++.... ...++.+++++.+
T Consensus 207 ~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (320)
T cd08243 207 GGFDKVLELVGTA-TLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAA 285 (320)
T ss_pred CCceEEEECCChH-HHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHC
Confidence 7899999999975 67899999999999999987532221 112222 25666766655432 2457788899999
Q ss_pred CCCccce-EEECCccHHHHHHHHHcCCCceeEEE
Q 018158 320 YNITCNI-EVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 320 ~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
+.+++.. +.|+++++++|++.+.+++..||+++
T Consensus 286 ~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 286 GHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred CceecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 9987644 89999999999999999888889886
No 101
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=4.2e-35 Score=270.37 Aligned_cols=307 Identities=21% Similarity=0.288 Sum_probs=247.1
Q ss_pred cceeEEeccCCCC---CceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHDPSG---KITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~~~~---~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|+++++.-.+... .+++++++.|++.+++|+||+.++++|++|++.+.+.++....|.++|||++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 3556665544433 4777788888899999999999999999999988876643446778999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
|++||+|+..... ...|+|++|+.++.+.++++|+++++++++.+++.
T Consensus 81 ~~~Gd~V~~~~~~--------------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~ 128 (336)
T cd08252 81 FKVGDEVYYAGDI--------------------------------TRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLT 128 (336)
T ss_pred CCCCCEEEEcCCC--------------------------------CCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhH
Confidence 9999999852110 24589999999999999999999999999999999
Q ss_pred hhhhhchhhccCCCCCCC-----CcEEEEEcC-ChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 167 GITVFCPMKDNNLIDSPA-----KKRIGIVGL-GGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~-----~~~vlI~Ga-g~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
+.+||+++......+ + +++++|+|+ |++|++++|+|+.+| ++|+++++++++.+.+++ +|++++++....
T Consensus 129 ~~ta~~~l~~~~~~~--~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 205 (336)
T cd08252 129 SLTAWEALFDRLGIS--EDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKE-LGADHVINHHQD 205 (336)
T ss_pred HHHHHHHHHHhcCCC--CCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCcEEEeCCcc
Confidence 999999986655544 5 999999997 999999999999999 899999999999999987 999888876632
Q ss_pred --HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCC----------
Q 018158 240 --MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG---------- 306 (360)
Q Consensus 240 --~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~---------- 306 (360)
...... ++++|++||++|....+..++++++++|+++.+|... ..++...+..++.++.+.....
T Consensus 206 ~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (336)
T cd08252 206 LAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMI 283 (336)
T ss_pred HHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEeeccccccccchh
Confidence 112222 3679999999997657899999999999999998653 2333444445677776643321
Q ss_pred --HHHHHHHHHHHhcCCCccce----EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 307 --MRETQEMMNVCGKYNITCNI----EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 307 --~~~~~~~~~~l~~~~l~~~i----~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
...++++++++.++.+.+.. +.++++++++|++.+.++...||++++
T Consensus 284 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 284 EQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred hHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 13467788899999987642 357999999999999999888999874
No 102
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=9.1e-35 Score=265.32 Aligned_cols=291 Identities=21% Similarity=0.309 Sum_probs=236.2
Q ss_pred CCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhh-ccCCCC--CCCCCccccccceEEEEecCCCCCCCCCCEEEec
Q 018158 20 PSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHV-KNDWGI--TMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96 (360)
Q Consensus 20 ~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~-~g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 96 (360)
+++.+++++++.|++.++||+||+.++++|++|++.+ .|.... ..+|.++|+|++|+|+++|++++.+++||+|++
T Consensus 3 ~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~- 81 (312)
T cd08269 3 GPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG- 81 (312)
T ss_pred CCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE-
Confidence 4468999999999999999999999999999999987 665421 224778999999999999999999999999986
Q ss_pred cCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhc
Q 018158 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKD 176 (360)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~ 176 (360)
...|+|++|+.++.+.++++|+++ ..++.....+.++|+++.
T Consensus 82 -----------------------------------~~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~- 123 (312)
T cd08269 82 -----------------------------------LSGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR- 123 (312)
T ss_pred -----------------------------------ecCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-
Confidence 235899999999999999999998 222222367788888887
Q ss_pred cCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHH---HHHhc--CCCcC
Q 018158 177 NNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAM---QMQAG--KRTLD 250 (360)
Q Consensus 177 ~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~---~~~~~--~~~~d 250 (360)
...+ +++++++|+|+|.+|++++|+|+.+|++ |+++.+++++.+.+++ +|++++++....+ ..... +.++|
T Consensus 124 ~~~~--~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~l~~~~~~~~vd 200 (312)
T cd08269 124 RGWI--RAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARE-LGATEVVTDDSEAIVERVRELTGGAGAD 200 (312)
T ss_pred hcCC--CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCceEecCCCcCHHHHHHHHcCCCCCC
Confidence 4444 4999999998899999999999999998 9999999888887777 9998888755432 22222 46899
Q ss_pred EEEEcCCCcccHHHHHHHhccCCEEEEeCCCC-CCcccChhhHhccCcEEEEeecCC----HHHHHHHHHHHhcCCCcc-
Q 018158 251 FILDTVSAKHSLGPILELLKVNGTLSVVGAPE-APFELPSFPLIFGKRSVKGSMTGG----MRETQEMMNVCGKYNITC- 324 (360)
Q Consensus 251 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~l~~~~l~~- 324 (360)
+++||.|....+..++++++++|+++.+|... ....++...+..+++++.++.... .+.++.+++++.++.+.+
T Consensus 201 ~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 280 (312)
T cd08269 201 VVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLG 280 (312)
T ss_pred EEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCch
Confidence 99999987667889999999999999998654 233444456677888887765433 357889999999999876
Q ss_pred -ce-EEECCccHHHHHHHHHcCCC-ceeEEE
Q 018158 325 -NI-EVIKPDQINEALDRLARNDV-RYRFVI 352 (360)
Q Consensus 325 -~i-~~~~~~~~~~a~~~~~~~~~-~gkvvi 352 (360)
++ +.|+++++++|++.+.+++. .+|+++
T Consensus 281 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 281 SLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred hheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 23 88999999999999999865 478876
No 103
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=3.3e-34 Score=263.11 Aligned_cols=310 Identities=21% Similarity=0.307 Sum_probs=245.3
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+|.++...+++..+++++.|.|+|+++||+||+.++++|++|+..+.|.+.. ..+|.++|||++|+|++ +++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 45666655555568999999999999999999999999999999988876531 33577899999999998 7778899
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++... +.| ....|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus 79 ~Gd~V~~~~~---------------~~~--------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ 129 (324)
T cd08288 79 PGDRVVLTGW---------------GVG--------------ERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGF 129 (324)
T ss_pred CCCEEEECCc---------------cCC--------------CCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHH
Confidence 9999986310 000 12358999999999999999999999999999999999
Q ss_pred hhhchhh---ccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH-H
Q 018158 169 TVFCPMK---DNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM-Q 243 (360)
Q Consensus 169 ta~~~l~---~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~-~ 243 (360)
+|+.++. ..... +++++++|+|+ |++|++++|+|+.+|++|++++.++++.+.+++ +|+++++++++.... .
T Consensus 130 ta~~~~~~~~~~~~~--~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~ 206 (324)
T cd08288 130 TAMLCVMALEDHGVT--PGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRS-LGASEIIDRAELSEPGR 206 (324)
T ss_pred HHHHHHHHHhhcCcC--CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-cCCCEEEEcchhhHhhh
Confidence 9887765 33321 25789999999 999999999999999999999999999999977 999999988764331 1
Q ss_pred hc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCC------HHHHHHHHH
Q 018158 244 AG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGG------MRETQEMMN 315 (360)
Q Consensus 244 ~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~ 315 (360)
.. ..++|.++|+++.. .+...+..++.+|+++.+|.... ....+...++.++.++.+..... .+.++.+++
T Consensus 207 ~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (324)
T cd08288 207 PLQKERWAGAVDTVGGH-TLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLAR 285 (324)
T ss_pred hhccCcccEEEECCcHH-HHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHH
Confidence 12 34689999999874 46788889999999999987532 22333444447788888764321 234566667
Q ss_pred HHhcCCCccceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 316 VCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 316 ~l~~~~l~~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++.++.+.+.++.++++++++|++.+.+++..||+++++
T Consensus 286 ~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 286 DLDPALLEALTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred HHhcCCccccceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 788888876569999999999999999999999999864
No 104
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=2.7e-34 Score=266.50 Aligned_cols=309 Identities=24% Similarity=0.287 Sum_probs=238.5
Q ss_pred cceeEEeccCCC-CCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCCC---------------CCCCCCccccc
Q 018158 10 QSVVGWAAHDPS-GKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDWG---------------ITMYPVVPGHE 72 (360)
Q Consensus 10 ~~~~~~~~~~~~-~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~---------------~~~~p~~~G~e 72 (360)
|+|.++.-++.+ +.+++++.+.|+| +++||+||++++++|++|++.+.|... ....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 455555434332 2488999999999 499999999999999999998877421 23557899999
Q ss_pred cceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECC
Q 018158 73 ITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVP 152 (360)
Q Consensus 73 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP 152 (360)
++|+|+++|+++++|++||+|++.+.. ...|+|++|+.++.+.++++|
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~--------------------------------~~~g~~~~~~~v~~~~~~~lp 128 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP--------------------------------WSQGTHAEYVVVPENEVSKKP 128 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC--------------------------------CCCccceeEEEecHHHeecCC
Confidence 999999999999999999999863211 235999999999999999999
Q ss_pred CCCCccccccccchhhhhhchhhccCCCCC--CCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC
Q 018158 153 ENIAMDAAAPLLCAGITVFCPMKDNNLIDS--PAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG 229 (360)
Q Consensus 153 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~--~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g 229 (360)
+++++++++.+++.+.+||+++.....+.. ++|++++|+|+ |++|++++++|+.+|++|+++.++ ++.+.+++ +|
T Consensus 129 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~-~g 206 (350)
T cd08248 129 KNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKS-LG 206 (350)
T ss_pred CCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHH-hC
Confidence 999999999999999999999877665431 24999999997 999999999999999999888855 56666666 99
Q ss_pred CCeEeeCccHHHHHh--cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--C--ccc---------ChhhHh-
Q 018158 230 ADEFILSTNAMQMQA--GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--P--FEL---------PSFPLI- 293 (360)
Q Consensus 230 ~~~~v~~~~~~~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~--~~~---------~~~~~~- 293 (360)
.+++++..+.+.... ..+++|++||++|.. ....++++++++|+++.+|.... . ... ......
T Consensus 207 ~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
T cd08248 207 ADDVIDYNNEDFEEELTERGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNV 285 (350)
T ss_pred CceEEECCChhHHHHHHhcCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHH
Confidence 988887765433222 246799999999987 67999999999999999985431 1 011 000000
Q ss_pred ---ccCcEEE-EeecCCHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 294 ---FGKRSVK-GSMTGGMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 294 ---~~~~~i~-~~~~~~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
.+...+. +........+..+++++.++.+.+.+ +.|++++++++++.+.+++..+|++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 286 KSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 0111111 11122356788999999999987655 899999999999999988878888864
No 105
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=7e-34 Score=260.31 Aligned_cols=311 Identities=19% Similarity=0.261 Sum_probs=250.5
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|++.++...+.+..+.+++.+.|.+.+++|+|++.++++|++|+..+.|.+. ....|.++|||++|+|+++|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 3555555555556799999999999999999999999999999998877653 235678899999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.+. |.. ...|++++|+.++.+.++++|+++++++++.+++.+.
T Consensus 81 ~Gd~v~~~~~--------------------------~~~----~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ 130 (325)
T cd08253 81 VGDRVWLTNL--------------------------GWG----RRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPAL 130 (325)
T ss_pred CCCEEEEecc--------------------------ccC----CCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHH
Confidence 9999986421 000 1358999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hh
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~ 244 (360)
+||+++.....+. +|++++|+|+ |.+|++++++++..|++|+++++++++.+.+++ +|++++++....+.. ..
T Consensus 131 ~a~~~l~~~~~~~--~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 207 (325)
T cd08253 131 TAYRALFHRAGAK--AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQ-AGADAVFNYRAEDLADRILA 207 (325)
T ss_pred HHHHHHHHHhCCC--CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEEeCCCcCHHHHHHH
Confidence 9999998766655 9999999998 999999999999999999999999999999977 999888876654222 22
Q ss_pred c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCC--HH----HHHHHHHH
Q 018158 245 G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG--MR----ETQEMMNV 316 (360)
Q Consensus 245 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~----~~~~~~~~ 316 (360)
. ++++|+++++++.. .....+++++.+|+++.+|.......++...++.++.++.+..... +. .++.+.++
T Consensus 208 ~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (325)
T cd08253 208 ATAGQGVDVIIEVLANV-NLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAG 286 (325)
T ss_pred HcCCCceEEEEECCchH-HHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHH
Confidence 1 46899999999886 4678889999999999998754333444444456677776654321 22 24555567
Q ss_pred HhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 317 CGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 317 l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+.++.+++.. +.|++++++++++.+.++...||+++++
T Consensus 287 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 287 LADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred HHCCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 7788876654 8999999999999999988889999864
No 106
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=3.2e-34 Score=244.57 Aligned_cols=294 Identities=20% Similarity=0.174 Sum_probs=238.8
Q ss_pred CCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEec--CCCCCCCCCCEEEeccC
Q 018158 21 SGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVG--SNVKNFKVGDRAAVGCL 98 (360)
Q Consensus 21 ~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~~ 98 (360)
..+|+++|.++|+|+++|||+|+++.++.|. ...+....++--.|.-+|-..+|.++... |...+|++||.|..
T Consensus 24 ~d~F~lee~~vp~p~~GqvLl~~~ylS~DPy-mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~--- 99 (340)
T COG2130 24 PDDFRLEEVDVPEPGEGQVLLRTLYLSLDPY-MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVG--- 99 (340)
T ss_pred CCCceeEeccCCCCCcCceEEEEEEeccCHH-HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEe---
Confidence 3479999999999999999999999999983 22233333333456667776666555443 45677999999974
Q ss_pred ccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccc--cccccchhhhhhchhhc
Q 018158 99 AAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDA--AAPLLCAGITVFCPMKD 176 (360)
Q Consensus 99 ~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~--aa~l~~~~~ta~~~l~~ 176 (360)
..+|++|..++.+.+.|++++.-+.. ...|..++.|||.+|.+
T Consensus 100 -----------------------------------~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~ 144 (340)
T COG2130 100 -----------------------------------VSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLD 144 (340)
T ss_pred -----------------------------------cccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHH
Confidence 36899999999999999975543322 23778889999999999
Q ss_pred cCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhc----CCCcCE
Q 018158 177 NNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG----KRTLDF 251 (360)
Q Consensus 177 ~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~----~~~~d~ 251 (360)
++..+ +|++++|-+| |++|..+.|+||..|+||+.++.++++.+.+++.+|.|.++||+..+..+.+ .+++|+
T Consensus 145 igqpk--~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDv 222 (340)
T COG2130 145 IGQPK--AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDV 222 (340)
T ss_pred hcCCC--CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEE
Confidence 99876 9999999999 9999999999999999999999999999999998999999999998544332 789999
Q ss_pred EEEcCCCcccHHHHHHHhccCCEEEEeCCCCC---C-cc---cChhhHhccCcEEEEeec-CC-----HHHHHHHHHHHh
Q 018158 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAPEA---P-FE---LPSFPLIFGKRSVKGSMT-GG-----MRETQEMMNVCG 318 (360)
Q Consensus 252 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~-~~---~~~~~~~~~~~~i~~~~~-~~-----~~~~~~~~~~l~ 318 (360)
.||++|+. .+..++..|+..+|+..+|..+. . .+ -....++.+.+.+.|+.. .. .+..+++.+|+.
T Consensus 223 yfeNVGg~-v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~ 301 (340)
T COG2130 223 YFENVGGE-VLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVK 301 (340)
T ss_pred EEEcCCch-HHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHH
Confidence 99999998 68999999999999999997652 1 11 122346777899999877 22 245678889999
Q ss_pred cCCCccceE-EECCccHHHHHHHHHcCCCceeEEEecCC
Q 018158 319 KYNITCNIE-VIKPDQINEALDRLARNDVRYRFVIDIAG 356 (360)
Q Consensus 319 ~~~l~~~i~-~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 356 (360)
+|+++.... .-.|+++++||.-|.+++..||.|+++.+
T Consensus 302 ~GKi~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 302 EGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred cCceeeEeeehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 999987653 45699999999999999999999999863
No 107
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=1.2e-33 Score=258.50 Aligned_cols=304 Identities=23% Similarity=0.292 Sum_probs=249.0
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
||+.++.-.+.++.+++++.+.|.+.+++|+||+.++++|++|++...+.++ ....|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 4555555555567788888888888999999999999999999998877653 234578899999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++. ..+|+|++|+.++.+.++++|+++++.+++.++..+.
T Consensus 81 ~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~ 125 (323)
T cd05276 81 VGDRVCAL-----------------------------------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFF 125 (323)
T ss_pred CCCEEEEe-----------------------------------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHH
Confidence 99999852 1348999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHH---h
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQ---A 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~---~ 244 (360)
++|+++.....+. ++++++|+|+ |++|++++++++..|++|+++++++++++.+++ +|.+.+++....+... .
T Consensus 126 ~a~~~~~~~~~~~--~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 202 (323)
T cd05276 126 TAWQNLFQLGGLK--AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRA-LGADVAINYRTEDFAEEVKE 202 (323)
T ss_pred HHHHHHHHhcCCC--CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCCCEEEeCCchhHHHHHHH
Confidence 9999987766655 9999999998 999999999999999999999999999999877 9988887766542221 1
Q ss_pred c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCCH----------HHHH
Q 018158 245 G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGGM----------RETQ 311 (360)
Q Consensus 245 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~~----------~~~~ 311 (360)
. ++++|+++|++|... ....+++++++|+++.+|.... ...+....++.+++++.++..... ..+.
T Consensus 203 ~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (323)
T cd05276 203 ATGGRGVDVILDMVGGDY-LARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFRE 281 (323)
T ss_pred HhCCCCeEEEEECCchHH-HHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHH
Confidence 1 467999999999764 6888999999999999986542 233444455568888888765432 2246
Q ss_pred HHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEE
Q 018158 312 EMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 312 ~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
++++++.++.+.+.. +.|++++++++++.+.++...||+++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 282 HVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 677888888887654 89999999999999998887888774
No 108
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2e-33 Score=258.65 Aligned_cols=301 Identities=20% Similarity=0.267 Sum_probs=240.4
Q ss_pred ceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCCCCCC
Q 018158 11 SVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 11 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|++.+...+.+..+++++.+.|.|.++||+|++.++++|++|+.++.|..+. ..+|.++|||++|+|+.+|++++.|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 5566666666678999999999999999999999999999999988886532 346788999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|++.+ ..|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 82 Gd~V~~~~-----------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~t 126 (331)
T cd08273 82 GDRVAALT-----------------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVT 126 (331)
T ss_pred CCEEEEeC-----------------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHH
Confidence 99998631 2489999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH--HhcC
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM--QAGK 246 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~--~~~~ 246 (360)
||+++.....+. ++++++|+|+ |++|++++++|+.+|++|+++++ +++.+.+++ +|+.. ++....+.. ....
T Consensus 127 a~~~l~~~~~~~--~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~ 201 (331)
T cd08273 127 AYQMLHRAAKVL--TGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALRE-LGATP-IDYRTKDWLPAMLTP 201 (331)
T ss_pred HHHHHHHhcCCC--CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHHH-cCCeE-EcCCCcchhhhhccC
Confidence 999997766655 9999999998 99999999999999999999997 888888877 99654 333322111 1224
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcc--cCh------------hhH--hccCcEEEEeecC-----
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFE--LPS------------FPL--IFGKRSVKGSMTG----- 305 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~------------~~~--~~~~~~i~~~~~~----- 305 (360)
+++|++++++|+.. ...++++++.+|+++.+|....... ... ..+ ..+..........
T Consensus 202 ~~~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 280 (331)
T cd08273 202 GGVDVVFDGVGGES-YEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDP 280 (331)
T ss_pred CCceEEEECCchHH-HHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCH
Confidence 57999999999875 7899999999999999987643211 110 001 1122222222211
Q ss_pred --CHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEE
Q 018158 306 --GMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 306 --~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
..+.+..+++++.++.+.+.+ +.|++++++++++.+.+++..||+|+
T Consensus 281 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 281 KLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 125677888999999987755 89999999999999999888899886
No 109
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.8e-33 Score=255.77 Aligned_cols=307 Identities=24% Similarity=0.314 Sum_probs=245.1
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
||+.++.-.+.++.+.+++.+.|++.+++|+|++.++++|++|+....+... ....|.++|||++|+|+++|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 3555554444445688888888889999999999999999999998877653 233477899999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++... |.. ...|+|++|+.++.+.++++|+++++.+++.++..+.
T Consensus 81 ~Gd~V~~~~~--------------------------~~~----~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~ 130 (326)
T cd08272 81 VGDEVYGCAG--------------------------GLG----GLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGI 130 (326)
T ss_pred CCCEEEEccC--------------------------CcC----CCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHH
Confidence 9999986320 000 1358999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH--HHHHhc
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA--MQMQAG 245 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~~ 245 (360)
+||+++.+...+. ++++++|+|+ |++|++++++++.+|++|++++++ ++.+.+++ +|.+.+++.... ......
T Consensus 131 ~a~~~l~~~~~~~--~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 206 (326)
T cd08272 131 TAWEGLVDRAAVQ--AGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFARS-LGADPIIYYRETVVEYVAEH 206 (326)
T ss_pred HHHHHHHHhcCCC--CCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHHH-cCCCEEEecchhHHHHHHHh
Confidence 9999987666655 9999999997 999999999999999999999988 88888877 998888776543 111222
Q ss_pred --CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCC-----------HHHHHH
Q 018158 246 --KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG-----------MRETQE 312 (360)
Q Consensus 246 --~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~ 312 (360)
++++|.++|+++.. .....+++++++|+++.+|... .........+++++.+..... .+.+..
T Consensus 207 ~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (326)
T cd08272 207 TGGRGFDVVFDTVGGE-TLDASFEAVALYGRVVSILGGA---THDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILRE 282 (326)
T ss_pred cCCCCCcEEEECCChH-HHHHHHHHhccCCEEEEEecCC---ccchhhHhhhcceEEEEEcccccccccchhhHHHHHHH
Confidence 46799999999986 5788999999999999998653 222223335667766654321 345677
Q ss_pred HHHHHhcCCCccc-e-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 313 MMNVCGKYNITCN-I-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 313 ~~~~l~~~~l~~~-i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++++.++.+.+. . +.|++++++++++.+.+++..+|+++++
T Consensus 283 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 283 AARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred HHHHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 8888889988765 3 8999999999999999888889999864
No 110
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=6.2e-33 Score=253.37 Aligned_cols=297 Identities=22% Similarity=0.275 Sum_probs=242.4
Q ss_pred cCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEecc
Q 018158 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97 (360)
Q Consensus 18 ~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 97 (360)
.+....+.+.+.+.++++++||+|++.++++|++|++...+.++ ..+|.++|||++|+|+.+|+++.+|++||+|++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~-~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~ 86 (320)
T cd05286 8 TGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP-LPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG 86 (320)
T ss_pred CCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC-CCCCccCCcceeEEEEEECCCCCCCCCCCEEEEec
Confidence 34445777888877788999999999999999999998887653 24577899999999999999999999999998521
Q ss_pred CccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhcc
Q 018158 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDN 177 (360)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~ 177 (360)
..|+|++|+.++.+.++++|++++..+++.+++.+.++|+++...
T Consensus 87 -----------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~ 131 (320)
T cd05286 87 -----------------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRET 131 (320)
T ss_pred -----------------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHh
Confidence 158999999999999999999999999999999999999998776
Q ss_pred CCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHhc--CCCcCE
Q 018158 178 NLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQAG--KRTLDF 251 (360)
Q Consensus 178 ~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~--~~~~d~ 251 (360)
..+. ++++++|+|+ |++|++++++++.+|++|+++++++++.+.+++ +|++++++..+... .... ++++|+
T Consensus 132 ~~~~--~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 208 (320)
T cd05286 132 YPVK--PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARA-AGADHVINYRDEDFVERVREITGGRGVDV 208 (320)
T ss_pred cCCC--CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-CCCCEEEeCCchhHHHHHHHHcCCCCeeE
Confidence 6655 9999999997 999999999999999999999999999999977 99988887665422 2222 467999
Q ss_pred EEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecC----CH----HHHHHHHHHHhcCCC
Q 018158 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTG----GM----RETQEMMNVCGKYNI 322 (360)
Q Consensus 252 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~----~~----~~~~~~~~~l~~~~l 322 (360)
++||+++. ....++++++++|+++.+|..... ..++...+..+++++.+.... .. +.+..+++++.++.+
T Consensus 209 vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 287 (320)
T cd05286 209 VYDGVGKD-TFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKL 287 (320)
T ss_pred EEECCCcH-hHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCC
Confidence 99999875 678999999999999999875432 123333343667777544321 22 224567788888888
Q ss_pred ccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 323 TCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 323 ~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.+.. +.|++++++++++.+.++...||+++++
T Consensus 288 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 288 KVEIGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred cCcccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 7655 8999999999999999988889999853
No 111
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=3.2e-33 Score=257.14 Aligned_cols=290 Identities=18% Similarity=0.167 Sum_probs=234.2
Q ss_pred CCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC---CCCCCCccccccceEEEEecCCCCCCCCCCEEEec
Q 018158 20 PSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG---ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96 (360)
Q Consensus 20 ~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 96 (360)
+++.+.+++.+.|++.+++|+||+.++++|+.|.....+... +...+.++|+|++|+|+++|++ .|++||+|+.
T Consensus 16 ~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~- 92 (329)
T cd05288 16 PPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSG- 92 (329)
T ss_pred CccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEec-
Confidence 567899999999999999999999999999988665544321 1223567899999999999964 7999999974
Q ss_pred cCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeec-ceeEECCCCCC--cccccc-ccchhhhhhc
Q 018158 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADY-RFVVHVPENIA--MDAAAP-LLCAGITVFC 172 (360)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~-~~~~~iP~~~~--~~~aa~-l~~~~~ta~~ 172 (360)
.++|++|+.++. +.++++|++++ +.+++. +++.+.+||+
T Consensus 93 -------------------------------------~~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~ 135 (329)
T cd05288 93 -------------------------------------FLGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYF 135 (329)
T ss_pred -------------------------------------ccceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHH
Confidence 258999999999 99999999995 445555 8999999999
Q ss_pred hhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hhc-CC
Q 018158 173 PMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QAG-KR 247 (360)
Q Consensus 173 ~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~-~~ 247 (360)
++.....+. ++++++|+|+ |++|++++|+|+..|++|+++++++++.+.+++.+|+++++++.+.+.. ... ++
T Consensus 136 ~l~~~~~~~--~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~ 213 (329)
T cd05288 136 GLTEIGKPK--PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPD 213 (329)
T ss_pred HHHhccCCC--CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccC
Confidence 997766655 9999999997 9999999999999999999999999998888776899888887764322 111 46
Q ss_pred CcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcc------cChhhHhccCcEEEEeecCCH-----HHHHHHHHH
Q 018158 248 TLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFE------LPSFPLIFGKRSVKGSMTGGM-----RETQEMMNV 316 (360)
Q Consensus 248 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~ 316 (360)
++|++||++|.. .+..++++++++|+++.+|....... .....++.++.++.++..... +.+..++++
T Consensus 214 ~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (329)
T cd05288 214 GIDVYFDNVGGE-ILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKW 292 (329)
T ss_pred CceEEEEcchHH-HHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHH
Confidence 799999999975 67899999999999999986543211 123445677888887665432 456778889
Q ss_pred HhcCCCccc-eEEECCccHHHHHHHHHcCCCceeEEE
Q 018158 317 CGKYNITCN-IEVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 317 l~~~~l~~~-i~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
+.++.+++. +..+++++++++++.+.+++..||+++
T Consensus 293 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 293 LAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHCCCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence 999998764 477999999999999998888888874
No 112
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=7.5e-33 Score=257.06 Aligned_cols=302 Identities=21% Similarity=0.226 Sum_probs=226.7
Q ss_pred CCCCCceEEEEeCCCC---CCCeEEEEEeeeecccchhhhhccCCCCCC-CCCccccccceEEEEecCCCC-CCCCCCEE
Q 018158 19 DPSGKITPYIFKRREN---GVNDVTIKILYCGICHTDIHHVKNDWGITM-YPVVPGHEITGIITKVGSNVK-NFKVGDRA 93 (360)
Q Consensus 19 ~~~~~l~~~~~~~p~~---~~~evlVkv~~~~i~~~D~~~~~g~~~~~~-~p~~~G~e~~G~V~~vG~~v~-~~~~Gd~V 93 (360)
.+.+.+++++++.|.| ++++|+||+.++++|++|+..+.+...... .|.++|+|++|+|+++|++++ .|++||+|
T Consensus 8 ~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V 87 (352)
T cd08247 8 NNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEWKVGDEV 87 (352)
T ss_pred cCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCCCCCCEE
Confidence 3334555665555544 999999999999999999988754322222 377899999999999999998 89999999
Q ss_pred EeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc----eeEECCCCCCccccccccchhhh
Q 018158 94 AVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR----FVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~----~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
++.... .| ...|+|++|+.++.. .++++|+++++++++.+++.+.|
T Consensus 88 ~~~~~~---------------~~---------------~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~t 137 (352)
T cd08247 88 CGIYPH---------------PY---------------GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGT 137 (352)
T ss_pred EEeecC---------------CC---------------CCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHH
Confidence 863211 00 135899999999987 79999999999999999999999
Q ss_pred hhchhhccC-CCCCCCCcEEEEEcC-ChHHHHHHHHHHHc-CC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHH---HH
Q 018158 170 VFCPMKDNN-LIDSPAKKRIGIVGL-GGLGHVAVKFGKAF-GH-HVTVISTSPSKEKEAKELLGADEFILSTNAM---QM 242 (360)
Q Consensus 170 a~~~l~~~~-~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~-G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~---~~ 242 (360)
||+++.... .++ +|++++|+|+ |.+|++++|+|+.+ |. .|+.+. ++++.+.+++ +|++++++.++.. ..
T Consensus 138 a~~~l~~~~~~~~--~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~-~g~~~~i~~~~~~~~~~~ 213 (352)
T cd08247 138 AYQILEDLGQKLG--PDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKK-LGADHFIDYDAHSGVKLL 213 (352)
T ss_pred HHHHHHHhhhccC--CCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHH-hCCCEEEecCCCcccchH
Confidence 999998776 555 9999999999 89999999999987 55 577766 5565667766 9998888865533 11
Q ss_pred ----Hh-c-CCCcCEEEEcCCCcccHHHHHHHhc---cCCEEEEeCCCC-CCcc-----------cCh----hhHhccCc
Q 018158 243 ----QA-G-KRTLDFILDTVSAKHSLGPILELLK---VNGTLSVVGAPE-APFE-----------LPS----FPLIFGKR 297 (360)
Q Consensus 243 ----~~-~-~~~~d~vid~~g~~~~~~~~~~~l~---~~G~~v~~g~~~-~~~~-----------~~~----~~~~~~~~ 297 (360)
.. . ++++|++|||+|.......++++++ ++|+++.++... .... ... ........
T Consensus 214 ~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (352)
T cd08247 214 KPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSY 293 (352)
T ss_pred HHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCc
Confidence 11 1 5689999999998556788999999 999999874221 1110 000 11112333
Q ss_pred EEEEeec-CCHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 298 SVKGSMT-GGMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 298 ~i~~~~~-~~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.+..... ...+.++.+++++.++.+.+.. +.++++++++|++.+++++..||+++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 294 NYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred ceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 3332221 1235678888999999987755 8999999999999999998889999864
No 113
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=5.7e-33 Score=247.97 Aligned_cols=265 Identities=28% Similarity=0.474 Sum_probs=223.3
Q ss_pred eEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCc
Q 018158 38 DVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYC 116 (360)
Q Consensus 38 evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c 116 (360)
||+|++.++++|+.|++.+.|..+ ...+|.++|||++|+|+++|+.++.|++||+|++.+. ..|+.|.+|.. .|
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~----~~ 75 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPN-LGCGTCELCRE----LC 75 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCC-CCCCCCHHHHh----hC
Confidence 689999999999999999988764 3456788999999999999999999999999988655 58999999997 67
Q ss_pred ccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChH
Q 018158 117 DKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGL 196 (360)
Q Consensus 117 ~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~v 196 (360)
+...+ .+....|+|++|+.++.+.++++|+++++++++.++..+.+||+++.....+. ++++++|+|+|++
T Consensus 76 ~~~~~-------~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~--~~~~vli~g~~~~ 146 (271)
T cd05188 76 PGGGI-------LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLK--PGDTVLVLGAGGV 146 (271)
T ss_pred CCCCE-------eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCC--CCCEEEEECCCHH
Confidence 65432 22245799999999999999999999999999999999999999998887655 9999999999559
Q ss_pred HHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHh----cCCCcCEEEEcCCCcccHHHHHHHhccC
Q 018158 197 GHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQA----GKRTLDFILDTVSAKHSLGPILELLKVN 272 (360)
Q Consensus 197 G~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~----~~~~~d~vid~~g~~~~~~~~~~~l~~~ 272 (360)
|++++++++..|.+|+++++++++.+.+++ +|.+++++..+...... .++++|+++++++.......++++++++
T Consensus 147 G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~ 225 (271)
T cd05188 147 GLLAAQLAKAAGARVIVTDRSDEKLELAKE-LGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPG 225 (271)
T ss_pred HHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-hCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccC
Confidence 999999999999999999999999999887 89888887665433222 2578999999999844678999999999
Q ss_pred CEEEEeCCCCCCccc-ChhhHhccCcEEEEeecCCHHHHHHHHHHH
Q 018158 273 GTLSVVGAPEAPFEL-PSFPLIFGKRSVKGSMTGGMRETQEMMNVC 317 (360)
Q Consensus 273 G~~v~~g~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l 317 (360)
|+++.+|........ .....+.+++++.++....+.+++++++++
T Consensus 226 G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (271)
T cd05188 226 GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDLL 271 (271)
T ss_pred CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCHHHHHHHHhhC
Confidence 999999976543332 244567889999999988888888887653
No 114
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=8.2e-33 Score=251.53 Aligned_cols=302 Identities=24% Similarity=0.304 Sum_probs=241.6
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC---CCCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG---ITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|++.++...+....+.+++.+.|+++++||+||+.++++|++|+..+.|... ....|..+|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 3445554334444567888888889999999999999999999998877542 2345788999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
+++||+|++.+.. ...|+|++|+.++.+.++++|+++++.+++.+++.
T Consensus 81 ~~~G~~V~~~~~~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 128 (309)
T cd05289 81 FKVGDEVFGMTPF--------------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLA 128 (309)
T ss_pred CCCCCEEEEccCC--------------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHH
Confidence 9999999863211 12589999999999999999999999999999999
Q ss_pred hhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH-Hh
Q 018158 167 GITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM-QA 244 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~-~~ 244 (360)
+.++|+++.....+. ++++++|+|+ |.+|++++++++..|++|+++++++ +.+.+++ +|.+.+++....+.. ..
T Consensus 129 ~~~a~~~~~~~~~~~--~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~~-~g~~~~~~~~~~~~~~~~ 204 (309)
T cd05289 129 GLTAWQALFELGGLK--AGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLRS-LGADEVIDYTKGDFERAA 204 (309)
T ss_pred HHHHHHHHHhhcCCC--CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHHH-cCCCEEEeCCCCchhhcc
Confidence 999999998876655 9999999998 9999999999999999999998777 7787766 998888776554322 12
Q ss_pred cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCC-HHHHHHHHHHHhcCCCc
Q 018158 245 GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG-MRETQEMMNVCGKYNIT 323 (360)
Q Consensus 245 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~l~~~~l~ 323 (360)
.++++|++++++++. ....++++++++|+++.+|....... ....++..+....... .+.+..+++++.++.+.
T Consensus 205 ~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (309)
T cd05289 205 APGGVDAVLDTVGGE-TLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLR 279 (309)
T ss_pred CCCCceEEEECCchH-HHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecccHHHHHHHHHHHHCCCEE
Confidence 356799999999987 57899999999999999987543211 2233444444433222 56788899999999887
Q ss_pred cce-EEECCccHHHHHHHHHcCCCceeEEE
Q 018158 324 CNI-EVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 324 ~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
+.+ +.|++++++++++.+.+++..+|+++
T Consensus 280 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 280 PVVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred EeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 655 89999999999999998887788774
No 115
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.6e-32 Score=251.77 Aligned_cols=296 Identities=27% Similarity=0.378 Sum_probs=235.0
Q ss_pred CCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccC
Q 018158 22 GKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAA 101 (360)
Q Consensus 22 ~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 101 (360)
.++.+++.+.|++.+++|+||+.++++|++|+..+.+......+|.++|||++|+|+.+|++++.+++||+|++.+..
T Consensus 13 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~-- 90 (325)
T cd08271 13 LQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHASL-- 90 (325)
T ss_pred ceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCCCCEEEeccCC--
Confidence 389999999999999999999999999999999887765333447789999999999999999999999999863211
Q ss_pred CCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCC
Q 018158 102 CMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLID 181 (360)
Q Consensus 102 ~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~ 181 (360)
...|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.....+.
T Consensus 91 ------------------------------~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~ 140 (325)
T cd08271 91 ------------------------------ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIE 140 (325)
T ss_pred ------------------------------CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCC
Confidence 13589999999999999999999999999999999999999998777655
Q ss_pred CCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHh--cCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQA--GKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~--~~~~~d~vid~ 255 (360)
+|++++|+|+ |++|++++++++..|++|+++. ++++.+.+.+ +|++.+++...... ... .++++|+++++
T Consensus 141 --~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 216 (325)
T cd08271 141 --AGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVKS-LGADHVIDYNDEDVCERIKEITGGRGVDAVLDT 216 (325)
T ss_pred --CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHHH-cCCcEEecCCCccHHHHHHHHcCCCCCcEEEEC
Confidence 9999999999 8999999999999999998887 6777788866 99988887655322 222 24679999999
Q ss_pred CCCcccHHHHHHHhccCCEEEEeCCCCCCcccCh--hhHhccCcEEEEeecCC--------HHHHHHHHHHHhcCCCccc
Q 018158 256 VSAKHSLGPILELLKVNGTLSVVGAPEAPFELPS--FPLIFGKRSVKGSMTGG--------MRETQEMMNVCGKYNITCN 325 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~--~~~~~~~~~i~~~~~~~--------~~~~~~~~~~l~~~~l~~~ 325 (360)
+++.. ....+++++++|+++.+|.......... .....+.+.+....... .+.+..+++++.++.+.+.
T Consensus 217 ~~~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 295 (325)
T cd08271 217 VGGET-AAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPL 295 (325)
T ss_pred CCcHh-HHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeec
Confidence 98864 5678999999999999875432211111 11222333333322111 1234667788888888764
Q ss_pred -eEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 326 -IEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 326 -i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++.|+++++.++++.+.++...+|+++++
T Consensus 296 ~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 296 VIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred cceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 48999999999999999988889999864
No 116
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=6.3e-32 Score=247.50 Aligned_cols=306 Identities=22% Similarity=0.280 Sum_probs=247.5
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|++..+...+....+.+++.+.|++++++++||+.++++|++|+....+.+. +..+|.++|||++|+|+.+|+.+..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 3455554444456688888777778999999999999999999998877653 233467899999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++. ..+|++++|+.++.+.++++|+++++.+++.++..+.
T Consensus 81 ~Gd~V~~~-----------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ 125 (325)
T TIGR02824 81 VGDRVCAL-----------------------------------VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFF 125 (325)
T ss_pred CCCEEEEc-----------------------------------cCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHH
Confidence 99999862 1348999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hh
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~ 244 (360)
++|+++.....+. ++++++|+|+ |++|++++++++.+|++|+++.+++++.+.+++ +|.+.+++....+.. ..
T Consensus 126 ta~~~~~~~~~~~--~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 202 (325)
T TIGR02824 126 TVWSNLFQRGGLK--AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEA-LGADIAINYREEDFVEVVKA 202 (325)
T ss_pred HHHHHHHHhcCCC--CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEecCchhHHHHHHH
Confidence 9999977666655 9999999998 999999999999999999999999998888866 998777766543222 11
Q ss_pred c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCCH----------HHHH
Q 018158 245 G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGGM----------RETQ 311 (360)
Q Consensus 245 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~~----------~~~~ 311 (360)
. ++++|++++++|.. .+..++++++++|+++.+|.... ...++...++.+++++.+...... ..+.
T Consensus 203 ~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (325)
T TIGR02824 203 ETGGKGVDVILDIVGGS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELRE 281 (325)
T ss_pred HcCCCCeEEEEECCchH-HHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHH
Confidence 1 45799999999875 57889999999999999986542 224445555578899888765331 2235
Q ss_pred HHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 312 EMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 312 ~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++++++.++.+.+.. +.|++++++++++.+.++...||+++++
T Consensus 282 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 282 HVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred HHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 567788888887654 8899999999999999988889999864
No 117
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2e-32 Score=250.38 Aligned_cols=301 Identities=24% Similarity=0.282 Sum_probs=233.6
Q ss_pred EeccCCCCCc--eEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC---CCCCCCccccccceEEEEecCCCCCCCC
Q 018158 15 WAAHDPSGKI--TPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG---ITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 15 ~~~~~~~~~l--~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|..+++..++ ++++.+.|+++++||+|+++++++|++|++.+.|.++ ....+..+|||++|+|+++|+++..|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~ 82 (319)
T cd08267 3 YTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKV 82 (319)
T ss_pred eCCCCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCC
Confidence 3344554555 8889999999999999999999999999998877552 1234678999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|+..... ...|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 83 Gd~V~~~~~~--------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~ 130 (319)
T cd08267 83 GDEVFGRLPP--------------------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLT 130 (319)
T ss_pred CCEEEEeccC--------------------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHH
Confidence 9999863210 13489999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH--HhcC
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM--QAGK 246 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~--~~~~ 246 (360)
||+++.....++ ++++++|+|+ |++|++++++|+.+|++|++++++ ++.+.+++ +|.+++++....+.. ...+
T Consensus 131 a~~~~~~~~~~~--~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 206 (319)
T cd08267 131 ALQALRDAGKVK--PGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVRS-LGADEVIDYTTEDFVALTAGG 206 (319)
T ss_pred HHHHHHHhcCCC--CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHHH-cCCCEeecCCCCCcchhccCC
Confidence 999998887665 9999999998 999999999999999999998865 77888877 998888776543221 1225
Q ss_pred CCcCEEEEcCCCc-ccHHHHHHHhccCCEEEEeCCCCCCcccC-----hhh-HhccCcEEEEeecCCHHHHHHHHHHHhc
Q 018158 247 RTLDFILDTVSAK-HSLGPILELLKVNGTLSVVGAPEAPFELP-----SFP-LIFGKRSVKGSMTGGMRETQEMMNVCGK 319 (360)
Q Consensus 247 ~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----~~~-~~~~~~~i~~~~~~~~~~~~~~~~~l~~ 319 (360)
+++|++++|+|.. .........++++|+++.+|......... ... ...+.+.... .....+.+..+++++.+
T Consensus 207 ~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 285 (319)
T cd08267 207 EKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFL-AKPNAEDLEQLAELVEE 285 (319)
T ss_pred CCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEE-ecCCHHHHHHHHHHHHC
Confidence 6799999999853 12233333499999999998754322111 111 1112222222 22236778999999999
Q ss_pred CCCccce-EEECCccHHHHHHHHHcCCCceeEEE
Q 018158 320 YNITCNI-EVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 320 ~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
+++.+.+ +.|+++++++|++.+.+++..+|+++
T Consensus 286 ~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 286 GKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred CCeeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 9987655 89999999999999998887788774
No 118
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.8e-32 Score=246.54 Aligned_cols=310 Identities=20% Similarity=0.255 Sum_probs=245.9
Q ss_pred ceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCCC
Q 018158 11 SVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 11 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+..+.-.+....+.+++.+.|.+.+++++|++.++++|+.|+....+.+. ...+|.++|||++|+|+.+|+++..|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 81 (328)
T cd08268 2 RAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFAV 81 (328)
T ss_pred eEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCCC
Confidence 444444334456788888888888999999999999999999998877653 2244778999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|++.+.. .....|++++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 82 Gd~V~~~~~~------------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 131 (328)
T cd08268 82 GDRVSVIPAA------------------------------DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLT 131 (328)
T ss_pred CCEEEecccc------------------------------ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHH
Confidence 9999863210 0124589999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hhc
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QAG 245 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~ 245 (360)
+|+++.....+. ++++++|+|+ |.+|++++++++..|++|+.++++.++.+.+++ +|.+.+++....... ...
T Consensus 132 a~~~~~~~~~~~--~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 208 (328)
T cd08268 132 AYGALVELAGLR--PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLA-LGAAHVIVTDEEDLVAEVLRI 208 (328)
T ss_pred HHHHHHHhcCCC--CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCCCEEEecCCccHHHHHHHH
Confidence 999987766655 8999999999 999999999999999999999999999999877 898888776553221 111
Q ss_pred --CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCC----HHH----HHHHH
Q 018158 246 --KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGG----MRE----TQEMM 314 (360)
Q Consensus 246 --~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~----~~~----~~~~~ 314 (360)
+.++|+++++.+.. ....++++++++|+++.+|.... ...++....+.++..+.+..... ..+ ++.+.
T Consensus 209 ~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (328)
T cd08268 209 TGGKGVDVVFDPVGGP-QFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFIL 287 (328)
T ss_pred hCCCCceEEEECCchH-hHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHH
Confidence 45799999999985 57889999999999999986542 22333333567788877765432 223 34445
Q ss_pred HHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 315 NVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 315 ~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++.++.+.+.. +.|+++++.++++.+.+++..||+++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 288 DGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred HHHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 567777776654 8899999999999999888889999863
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=1.7e-31 Score=244.37 Aligned_cols=304 Identities=25% Similarity=0.371 Sum_probs=244.6
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCC-CCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENG-VNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNF 87 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 87 (360)
|++.++.-.+.+..+.+.+.+ |.+. +++++|++.++++|++|++.+.|.+. ....|.++|||++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 345554434455678887777 6666 59999999999999999998877653 22346689999999999999999999
Q ss_pred CCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchh
Q 018158 88 KVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 88 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~ 167 (360)
++||+|+..+ ..|++++|+.++.+.++++|++++..+++.+...+
T Consensus 80 ~~G~~V~~~~-----------------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 124 (323)
T cd08241 80 KVGDRVVALT-----------------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTY 124 (323)
T ss_pred CCCCEEEEec-----------------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHH
Confidence 9999998621 15899999999999999999999999988899999
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---H
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---Q 243 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~ 243 (360)
.+||+++.....+. ++++++|+|+ |++|++++++++..|++|+++++++++.+.+++ +|.+.+++....+.. .
T Consensus 125 ~~a~~~~~~~~~~~--~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~i~ 201 (323)
T cd08241 125 GTAYHALVRRARLQ--PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARA-LGADHVIDYRDPDLRERVK 201 (323)
T ss_pred HHHHHHHHHhcCCC--CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHH-cCCceeeecCCccHHHHHH
Confidence 99999987666655 9999999999 999999999999999999999999999999987 898877776553221 2
Q ss_pred hc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcc-cChhhHhccCcEEEEeecCC---------HHHHH
Q 018158 244 AG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFE-LPSFPLIFGKRSVKGSMTGG---------MRETQ 311 (360)
Q Consensus 244 ~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~~---------~~~~~ 311 (360)
.. ++++|.+++++|.. ....++++++++|+++.+|....... +.......++.++.+..... .+.+.
T Consensus 202 ~~~~~~~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (323)
T cd08241 202 ALTGGRGVDVVYDPVGGD-VFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLA 280 (323)
T ss_pred HHcCCCCcEEEEECccHH-HHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHH
Confidence 22 46799999999874 57889999999999999987543332 33334556788888765432 14567
Q ss_pred HHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 312 EMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 312 ~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
.+++++.++.+.+.. +.|++++++++++.+.++...||++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 281 ELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred HHHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 788899999887655 899999999999999988878888864
No 120
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=2.3e-31 Score=241.43 Aligned_cols=283 Identities=20% Similarity=0.263 Sum_probs=226.7
Q ss_pred CCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhh
Q 018158 31 RRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCK 109 (360)
Q Consensus 31 ~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~ 109 (360)
.|++.+++|+||+.++++|++|+..+.+.++ ...+|.++|+|++|+|+++|+++++|++||+|++.+.
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----------- 70 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG----------- 70 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-----------
Confidence 5778999999999999999999999888653 2346778999999999999999999999999986321
Q ss_pred CCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEE
Q 018158 110 DSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG 189 (360)
Q Consensus 110 ~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vl 189 (360)
...|+|++|+.++.+.++++|+++++++++.++..+.+||+++.. .. +++|++++
T Consensus 71 ----------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~~--~~~g~~vl 125 (303)
T cd08251 71 ----------------------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFAR-AG--LAKGEHIL 125 (303)
T ss_pred ----------------------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHh-cC--CCCCCEEE
Confidence 235899999999999999999999999999999999999999863 44 45999999
Q ss_pred EEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hhc--CCCcCEEEEcCCCcccHH
Q 018158 190 IVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QAG--KRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 190 I~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~--~~~~d~vid~~g~~~~~~ 263 (360)
|+|+ |++|++++|+++.+|++|+++++++++++.+++ +|++.+++....+.. ... ++++|+++|+++.. ...
T Consensus 126 i~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~-~~~ 203 (303)
T cd08251 126 IQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQ-LGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGE-AIQ 203 (303)
T ss_pred EecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHH-HHH
Confidence 9987 999999999999999999999999999999977 999888876654222 212 46799999999764 578
Q ss_pred HHHHHhccCCEEEEeCCCCC--CcccChhhHhccCcEEEEeec-----CC----HHHHHHHHHHHhcCCCccce-EEECC
Q 018158 264 PILELLKVNGTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMT-----GG----MRETQEMMNVCGKYNITCNI-EVIKP 331 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~-----~~----~~~~~~~~~~l~~~~l~~~i-~~~~~ 331 (360)
..+++++++|+++.+|.... ...+.... +.++..+..... .. .+.+.++++++.++.+++.. +.|++
T Consensus 204 ~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 282 (303)
T cd08251 204 KGLNCLAPGGRYVEIAMTALKSAPSVDLSV-LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPF 282 (303)
T ss_pred HHHHHhccCcEEEEEeccCCCccCccChhH-hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcH
Confidence 89999999999999876431 12222222 222222222111 11 13467778888899887654 89999
Q ss_pred ccHHHHHHHHHcCCCceeEEE
Q 018158 332 DQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 332 ~~~~~a~~~~~~~~~~gkvvi 352 (360)
++++++++.+.+++..||+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 283 DDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred HHHHHHHHHHHhCCCcceEeC
Confidence 999999999999888888874
No 121
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.5e-30 Score=238.39 Aligned_cols=296 Identities=23% Similarity=0.327 Sum_probs=235.5
Q ss_pred CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCCCCCEEEecc
Q 018158 19 DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97 (360)
Q Consensus 19 ~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 97 (360)
+....+.+.+.+.|++.+++|+||+.++++|++|+..+.|.+. ....|.++|||++|+|+.+|+++.+|++||+|++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~- 87 (337)
T cd08275 9 GGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGL- 87 (337)
T ss_pred CCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEe-
Confidence 3445788888888888999999999999999999998887653 23457789999999999999999999999999862
Q ss_pred CccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhcc
Q 018158 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDN 177 (360)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~ 177 (360)
...|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++...
T Consensus 88 ----------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~ 133 (337)
T cd08275 88 ----------------------------------TRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFEL 133 (337)
T ss_pred ----------------------------------cCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHh
Confidence 1248999999999999999999999999999999999999998777
Q ss_pred CCCCCCCCcEEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHh-cCCCcCE
Q 018158 178 NLIDSPAKKRIGIVGL-GGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQA-GKRTLDF 251 (360)
Q Consensus 178 ~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~-~~~~~d~ 251 (360)
..+. ++++++|+|+ |.+|++++++|+.+ +..++.. .++++.+.+.+ +|++.+++...... ... .++++|+
T Consensus 134 ~~~~--~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~d~ 209 (337)
T cd08275 134 GNLR--PGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGT-ASASKHEALKE-NGVTHVIDYRTQDYVEEVKKISPEGVDI 209 (337)
T ss_pred hCCC--CCCEEEEEcCcchHHHHHHHHHHHccCcEEEEe-CCHHHHHHHHH-cCCcEEeeCCCCcHHHHHHHHhCCCceE
Confidence 6655 9999999999 99999999999998 3333322 24557788876 99888887654321 221 2567999
Q ss_pred EEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC----c-------------ccChhhHhccCcEEEEeecCC----H---
Q 018158 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP----F-------------ELPSFPLIFGKRSVKGSMTGG----M--- 307 (360)
Q Consensus 252 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~-------------~~~~~~~~~~~~~i~~~~~~~----~--- 307 (360)
++|++|+. ....++++++++|+++.+|..... . .+....++.++.++.++.... .
T Consensus 210 v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (337)
T cd08275 210 VLDALGGE-DTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELL 288 (337)
T ss_pred EEECCcHH-HHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHH
Confidence 99999976 568899999999999999865421 1 111234567778887765421 1
Q ss_pred -HHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 308 -RETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 308 -~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
..+.++++++.++.+.+.. +.|++++++++++.+.+++..||+++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 289 TEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 2356777888899887665 8999999999999999988889999864
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=4.4e-30 Score=231.27 Aligned_cols=273 Identities=21% Similarity=0.297 Sum_probs=222.3
Q ss_pred CeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCc
Q 018158 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYC 116 (360)
Q Consensus 37 ~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c 116 (360)
+||+||+.++++|++|++...|.. ..+|.++|||++|+|+++|+.++.|++||+|++
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~--------------------- 57 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMG--------------------- 57 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEE---------------------
Confidence 589999999999999999988764 245788999999999999999999999999986
Q ss_pred ccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-Ch
Q 018158 117 DKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GG 195 (360)
Q Consensus 117 ~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~ 195 (360)
...|+|++|+.++.+.++++|+++++.+++.+++.+.++|.++.....++ +|++++|+|+ |+
T Consensus 58 ---------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~g~~vlv~g~~g~ 120 (293)
T cd05195 58 ---------------LAPGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQ--KGESVLIHAAAGG 120 (293)
T ss_pred ---------------EecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccC--CCCEEEEecCCCH
Confidence 23589999999999999999999999999999999999999987766655 9999999987 99
Q ss_pred HHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC--CCeEeeCccHHH---HHhc--CCCcCEEEEcCCCcccHHHHHHH
Q 018158 196 LGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG--ADEFILSTNAMQ---MQAG--KRTLDFILDTVSAKHSLGPILEL 268 (360)
Q Consensus 196 vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g--~~~~v~~~~~~~---~~~~--~~~~d~vid~~g~~~~~~~~~~~ 268 (360)
+|++++|+++.+|++|+++++++++.+.+++ .| ++.+++..+.+. .... ++++|++++++|.. .+..++++
T Consensus 121 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~ 198 (293)
T cd05195 121 VGQAAIQLAQHLGAEVFATVGSEEKREFLRE-LGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE-LLRASWRC 198 (293)
T ss_pred HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-hCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHh
Confidence 9999999999999999999999999999888 77 677777655422 2222 56799999999987 68999999
Q ss_pred hccCCEEEEeCCCCCC--cccChhhHhccCcEEEEeecC-----C----HHHHHHHHHHHhcCCCccce-EEECCccHHH
Q 018158 269 LKVNGTLSVVGAPEAP--FELPSFPLIFGKRSVKGSMTG-----G----MRETQEMMNVCGKYNITCNI-EVIKPDQINE 336 (360)
Q Consensus 269 l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~-----~----~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~ 336 (360)
++++|+++.+|..... ..+.... +.++..+...... . .+.+..+++++.++++.+.. +.++++++++
T Consensus 199 l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (293)
T cd05195 199 LAPFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEID 277 (293)
T ss_pred cccCceEEEeeccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHH
Confidence 9999999999865422 1222222 3344454443221 1 23467788889999987665 7899999999
Q ss_pred HHHHHHcCCCceeEEE
Q 018158 337 ALDRLARNDVRYRFVI 352 (360)
Q Consensus 337 a~~~~~~~~~~gkvvi 352 (360)
+++.+.+++..||+++
T Consensus 278 a~~~~~~~~~~~~ivv 293 (293)
T cd05195 278 AFRLMQSGKHIGKVVL 293 (293)
T ss_pred HHHHHhcCCCCceecC
Confidence 9999999888888764
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=8.7e-30 Score=229.05 Aligned_cols=268 Identities=21% Similarity=0.323 Sum_probs=216.7
Q ss_pred EEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCccccc
Q 018158 41 IKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQ 120 (360)
Q Consensus 41 Vkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~ 120 (360)
||+.++++|++|++...|.++ .|.++|||++|+|+++|+.++.|++||+|++
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~------------------------- 53 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMG------------------------- 53 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEE-------------------------
Confidence 899999999999999887653 3578999999999999999999999999986
Q ss_pred ccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHH
Q 018158 121 FTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHV 199 (360)
Q Consensus 121 ~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~ 199 (360)
...|+|++|+.++.+.++++|+++++.+++.+++.+.++|.++....... +|++++|+|+ |.+|++
T Consensus 54 -----------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~g~~vlv~g~~~~~g~~ 120 (288)
T smart00829 54 -----------LAPGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLR--PGESVLIHAAAGGVGQA 120 (288)
T ss_pred -----------EcCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCC--CCCEEEEecCCcHHHHH
Confidence 23589999999999999999999999999999999999999986655544 9999999997 999999
Q ss_pred HHHHHHHcCCeEEEEeCChhHHHHHHHHcCC--CeEeeCccHHHH---Hhc--CCCcCEEEEcCCCcccHHHHHHHhccC
Q 018158 200 AVKFGKAFGHHVTVISTSPSKEKEAKELLGA--DEFILSTNAMQM---QAG--KRTLDFILDTVSAKHSLGPILELLKVN 272 (360)
Q Consensus 200 aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~--~~~v~~~~~~~~---~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~ 272 (360)
++++++.+|++|+++++++++++.+++ +|+ +.++++.+.+.. ... ++++|+++|+++.. ....++++++++
T Consensus 121 ~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~ 198 (288)
T smart00829 121 AIQLAQHLGAEVFATAGSPEKRDFLRE-LGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGE-FLDASLRCLAPG 198 (288)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHhccCC
Confidence 999999999999999999999999977 997 777776554222 111 45799999999864 678899999999
Q ss_pred CEEEEeCCCCC--CcccChhhHhccCcEEEEeecC----C----HHHHHHHHHHHhcCCCccc-eEEECCccHHHHHHHH
Q 018158 273 GTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMTG----G----MRETQEMMNVCGKYNITCN-IEVIKPDQINEALDRL 341 (360)
Q Consensus 273 G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~----~----~~~~~~~~~~l~~~~l~~~-i~~~~~~~~~~a~~~~ 341 (360)
|+++.+|.... ...++... +.++..+.+.... . .+.+..+++++.++++.+. ++.|++++++++++.+
T Consensus 199 g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (288)
T smart00829 199 GRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYM 277 (288)
T ss_pred cEEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHH
Confidence 99999986531 22222222 3445555443321 1 2345677788888888764 4889999999999999
Q ss_pred HcCCCceeEEE
Q 018158 342 ARNDVRYRFVI 352 (360)
Q Consensus 342 ~~~~~~gkvvi 352 (360)
..++..||+++
T Consensus 278 ~~~~~~~~ivv 288 (288)
T smart00829 278 QQGKHIGKVVL 288 (288)
T ss_pred hcCCCcceEeC
Confidence 99887788764
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=4.7e-28 Score=217.37 Aligned_cols=245 Identities=24% Similarity=0.360 Sum_probs=196.6
Q ss_pred CCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEE
Q 018158 62 ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEML 141 (360)
Q Consensus 62 ~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~ 141 (360)
+..+|.++|||++|+|+++|+++++|++||+|+. .+.|++|+
T Consensus 17 ~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~--------------------------------------~~~~~~~~ 58 (277)
T cd08255 17 KLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFC--------------------------------------FGPHAERV 58 (277)
T ss_pred cCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEe--------------------------------------cCCcceEE
Confidence 4458899999999999999999999999999975 14689999
Q ss_pred EeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhH
Q 018158 142 VADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSK 220 (360)
Q Consensus 142 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~ 220 (360)
.++.+.++++|+++++.+++.+ +.+.+||+++.. .. ++++++++|+|+|.+|++++++|+.+|++ |+++++++++
T Consensus 59 ~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~~-~~--~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~ 134 (277)
T cd08255 59 VVPANLLVPLPDGLPPERAALT-ALAATALNGVRD-AE--PRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAAR 134 (277)
T ss_pred EcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHHh-cC--CCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHH
Confidence 9999999999999999998888 789999999864 44 44999999998899999999999999998 9999999999
Q ss_pred HHHHHHHcC-CCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEE
Q 018158 221 EKEAKELLG-ADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSV 299 (360)
Q Consensus 221 ~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i 299 (360)
.+.+++ +| .+.+++.... ...++++|++||+++........+++++++|+++.+|............+..+..++
T Consensus 135 ~~~~~~-~g~~~~~~~~~~~---~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~ 210 (277)
T cd08255 135 RELAEA-LGPADPVAADTAD---EIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPI 210 (277)
T ss_pred HHHHHH-cCCCccccccchh---hhcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeE
Confidence 997777 99 5665544321 113568999999998766778999999999999999876543111122344455566
Q ss_pred EEeecCC------------HHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcC-CCceeEEE
Q 018158 300 KGSMTGG------------MRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARN-DVRYRFVI 352 (360)
Q Consensus 300 ~~~~~~~------------~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~-~~~gkvvi 352 (360)
.+..... .+.++++++++.++.+.+.+ +.|+++++++|++.++++ ....|+++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 211 RSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred EeecccccccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 6554321 14578899999999987755 899999999999999877 34467653
No 125
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.96 E-value=6.2e-28 Score=234.20 Aligned_cols=292 Identities=16% Similarity=0.186 Sum_probs=239.5
Q ss_pred CCCCCceEEEEeCC---CCCCCeEEEEEeeeecccchhhhhccCCCCCCCC-------CccccccceEEEEecCCCCCCC
Q 018158 19 DPSGKITPYIFKRR---ENGVNDVTIKILYCGICHTDIHHVKNDWGITMYP-------VVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 19 ~~~~~l~~~~~~~p---~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p-------~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
+.-..++|.+.|.. +..++.=+.-|-|++||..|++...|+.++.-.| .++|-|++|+ .+
T Consensus 1424 GDlsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~ 1493 (2376)
T KOG1202|consen 1424 GDLSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DA 1493 (2376)
T ss_pred ccccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cC
Confidence 33346777776655 3467777999999999999999999988754333 5789999886 45
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
-|.||+++. ..-++++.+.++.+++|.+|++..+++|++.||.|.
T Consensus 1494 ~GrRvM~mv-----------------------------------pAksLATt~l~~rd~lWevP~~WTleeAstVP~VYs 1538 (2376)
T KOG1202|consen 1494 SGRRVMGMV-----------------------------------PAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYS 1538 (2376)
T ss_pred CCcEEEEee-----------------------------------ehhhhhhhhhcchhhhhhCCcccchhhcccCceEee
Confidence 699999754 346788999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC---CCeEeeCccHHHH--
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG---ADEFILSTNAMQM-- 242 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g---~~~~v~~~~~~~~-- 242 (360)
|||++|...+..+ +|+++||+++ |++|++||.+|...|++|+.++.+.+++++++++|+ ..++-|+++.+..
T Consensus 1539 TaYYALVvRG~mk--kGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~ 1616 (2376)
T KOG1202|consen 1539 TAYYALVVRGQMK--KGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQH 1616 (2376)
T ss_pred eehhhhhhhcccc--CCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHH
Confidence 9999998877755 9999999966 999999999999999999999999999999999887 4566676665433
Q ss_pred ---HhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccC-hhhHhccCcEEEEeecC-----CHHHHHHH
Q 018158 243 ---QAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELP-SFPLIFGKRSVKGSMTG-----GMRETQEM 313 (360)
Q Consensus 243 ---~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~i~~~~~~-----~~~~~~~~ 313 (360)
.+.++|+|+|+|....+ .++..++||+.+||+..+|...-....+ ....+.++.+++|.... ..++++++
T Consensus 1617 vl~~T~GrGVdlVLNSLaeE-kLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev 1695 (2376)
T KOG1202|consen 1617 VLWHTKGRGVDLVLNSLAEE-KLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREV 1695 (2376)
T ss_pred HHHHhcCCCeeeehhhhhHH-HHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHH
Confidence 22389999999999776 5799999999999999999765333222 23457789999988763 45667777
Q ss_pred HHHHhcC----CCccc-eEEECCccHHHHHHHHHcCCCceeEEEecCCCc
Q 018158 314 MNVCGKY----NITCN-IEVIKPDQINEALDRLARNDVRYRFVIDIAGGA 358 (360)
Q Consensus 314 ~~~l~~~----~l~~~-i~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~ 358 (360)
..++++| .++|. .++|+-.++++||++|.+++..||+|+++..+.
T Consensus 1696 ~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~eE 1745 (2376)
T KOG1202|consen 1696 AALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRAEE 1745 (2376)
T ss_pred HHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEcccc
Confidence 7777654 55664 489999999999999999999999999996654
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.95 E-value=6.8e-26 Score=193.06 Aligned_cols=291 Identities=15% Similarity=0.107 Sum_probs=222.0
Q ss_pred CceEEE--EeC-CCCCCCeEEEEEeeeecccchhhhhccCCCC-----CCCCCccccccceEEEEecCCCCCCCCCCEEE
Q 018158 23 KITPYI--FKR-RENGVNDVTIKILYCGICHTDIHHVKNDWGI-----TMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94 (360)
Q Consensus 23 ~l~~~~--~~~-p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-----~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 94 (360)
.+.+++ +++ .+++.++||||.++-+.-|.-...+....+. ..+.-+.-..++|+|++. +..+|++||.|.
T Consensus 21 d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~ 98 (343)
T KOG1196|consen 21 DFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVW 98 (343)
T ss_pred cceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEE
Confidence 444443 443 3568999999999999876543322211111 112222223789999995 457899999997
Q ss_pred eccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecce--eEECCC--CCCccccc-cccchhhh
Q 018158 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRF--VVHVPE--NIAMDAAA-PLLCAGIT 169 (360)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~--~~~iP~--~~~~~~aa-~l~~~~~t 169 (360)
.. -+|.+|..++... .++||. ++++.... .+..++.|
T Consensus 99 g~--------------------------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glT 140 (343)
T KOG1196|consen 99 GI--------------------------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLT 140 (343)
T ss_pred Ee--------------------------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhH
Confidence 52 3799999887653 555543 44444333 67788999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhc---
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG--- 245 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~--- 245 (360)
||..+.++...+ +|++++|-|| |++|+++.|+||.+|++|+.++.++|+...++.+||.+..+||+++.....+
T Consensus 141 Ay~Gf~ei~~pk--~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r 218 (343)
T KOG1196|consen 141 AYAGFYEICSPK--KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKR 218 (343)
T ss_pred HHHHHHHhcCCC--CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHH
Confidence 999999988866 9999999999 9999999999999999999999999999999998999999999998443332
Q ss_pred --CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC---Ccc--c-ChhhHhccCcEEEEeecCCH-----HHHHH
Q 018158 246 --KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA---PFE--L-PSFPLIFGKRSVKGSMTGGM-----RETQE 312 (360)
Q Consensus 246 --~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~--~-~~~~~~~~~~~i~~~~~~~~-----~~~~~ 312 (360)
..++|+.||.+|+. .+...+..|+..||++.+|..+. ..+ + ....++.|++++.++...+. +-++.
T Consensus 219 ~~P~GIDiYfeNVGG~-~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~ 297 (343)
T KOG1196|consen 219 CFPEGIDIYFENVGGK-MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDF 297 (343)
T ss_pred hCCCcceEEEeccCcH-HHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHH
Confidence 68999999999998 57999999999999999998652 111 1 23457889999999776442 33466
Q ss_pred HHHHHhcCCCccceE-EECCccHHHHHHHHHcCCCceeEEEecCC
Q 018158 313 MMNVCGKYNITCNIE-VIKPDQINEALDRLARNDVRYRFVIDIAG 356 (360)
Q Consensus 313 ~~~~l~~~~l~~~i~-~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 356 (360)
+..++.+|+++..-. .-.|+..++||.-|.+++..||.++.+..
T Consensus 298 l~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvGKqiv~va~ 342 (343)
T KOG1196|consen 298 LLPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVGKQLVKVAR 342 (343)
T ss_pred HHHHHhcCceEEehhHHHHHhccHHHHHHHhccCcccceEEEeec
Confidence 677888999976643 34699999999999999999999999865
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.90 E-value=8e-24 Score=162.15 Aligned_cols=108 Identities=34% Similarity=0.619 Sum_probs=92.8
Q ss_pred CCeEEEEEeeeecccchhhhhcc-CCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCC
Q 018158 36 VNDVTIKILYCGICHTDIHHVKN-DWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQEN 114 (360)
Q Consensus 36 ~~evlVkv~~~~i~~~D~~~~~g-~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~ 114 (360)
|+||||||++++||++|+++++| ......+|.++|||++|+|+++|+++++|++||+|++.+.. .|+.|.+|..+.++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~~~~~ 79 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNI-GCGECEYCLSGRPN 79 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEE-ETSSSHHHHTTTGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeeccc-CccCchhhcCCccc
Confidence 79999999999999999999999 34467889999999999999999999999999999885555 59999999999999
Q ss_pred CcccccccccccccCCCccccceeeEEEeecceeEEC
Q 018158 115 YCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151 (360)
Q Consensus 115 ~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~i 151 (360)
+|++.... +...+|+|+||+.+++++++|+
T Consensus 80 ~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 80 LCPNPEVL-------GLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GTTTBEET-------TTSSTCSSBSEEEEEGGGEEEE
T ss_pred cCCCCCEe-------EcCCCCcccCeEEEehHHEEEC
Confidence 99875432 2247899999999999999985
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.73 E-value=4.9e-17 Score=128.77 Aligned_cols=124 Identities=29% Similarity=0.463 Sum_probs=111.2
Q ss_pred hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHhc--CCCcCEEEEcCCCcccHHHHHHHh
Q 018158 195 GLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQAG--KRTLDFILDTVSAKHSLGPILELL 269 (360)
Q Consensus 195 ~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~--~~~~d~vid~~g~~~~~~~~~~~l 269 (360)
++|++++|+||.+|++|+++++++++++.+++ +|+++++++++.+. ++.. +.++|++|||+|....++.++.++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~-~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKE-LGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-TTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHh-hcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence 58999999999999999999999999999999 99999999888632 3333 357999999999888899999999
Q ss_pred ccCCEEEEeCCCC-CCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhc
Q 018158 270 KVNGTLSVVGAPE-APFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGK 319 (360)
Q Consensus 270 ~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ 319 (360)
+++|+++.+|... ...+++...++.+++++.++....+++++++++++++
T Consensus 80 ~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 80 RPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp EEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred ccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence 9999999999988 6778889999999999999999999999999998864
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.52 E-value=1.2e-13 Score=128.15 Aligned_cols=175 Identities=14% Similarity=0.060 Sum_probs=136.6
Q ss_pred hchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcC
Q 018158 171 FCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLD 250 (360)
Q Consensus 171 ~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d 250 (360)
|.++.+.... .-+|++|+|+|+|++|+.+++.++.+|++|+++++++.|+..++. +|++.+ +. . +.-+++|
T Consensus 189 ~~~i~r~t~~-~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-~G~~~~-~~--~----e~v~~aD 259 (413)
T cd00401 189 IDGIKRATDV-MIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQAAM-EGYEVM-TM--E----EAVKEGD 259 (413)
T ss_pred HHHHHHhcCC-CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-cCCEEc-cH--H----HHHcCCC
Confidence 4454443222 238999999999999999999999999999999999999999988 998433 21 1 1235789
Q ss_pred EEEEcCCCcccHHHH-HHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHH-HHH--HHHHHHhcCCC-cc-
Q 018158 251 FILDTVSAKHSLGPI-LELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMR-ETQ--EMMNVCGKYNI-TC- 324 (360)
Q Consensus 251 ~vid~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~--~~~~~l~~~~l-~~- 324 (360)
++|+|+|....+... ++.++++|+++.+|.. ...++...+..+++++.++.....+ +++ +.+.++.+|++ +.
T Consensus 260 VVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~ 337 (413)
T cd00401 260 IFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLG 337 (413)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCc
Confidence 999999988777765 9999999999999964 4567778888889999988776433 455 78999999998 32
Q ss_pred -ce-EE-----ECCc-cHHHHHHHHHcCCCc-eeEEEecCC
Q 018158 325 -NI-EV-----IKPD-QINEALDRLARNDVR-YRFVIDIAG 356 (360)
Q Consensus 325 -~i-~~-----~~~~-~~~~a~~~~~~~~~~-gkvvi~~~~ 356 (360)
.+ |. ++|+ ++.++++.+.++... -|+++.+.+
T Consensus 338 ~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~~ 378 (413)
T cd00401 338 CATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPKK 378 (413)
T ss_pred ccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCHH
Confidence 33 66 8899 999999999886543 477776654
No 130
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.46 E-value=5.4e-14 Score=110.76 Aligned_cols=117 Identities=26% Similarity=0.330 Sum_probs=77.8
Q ss_pred cCCCeEeeCccHHHHHhcCCCcCEEEEcCC--CcccHHHHHHHhccCCEEEEeCCCCCCcccChhhH--hccCcEEEEee
Q 018158 228 LGADEFILSTNAMQMQAGKRTLDFILDTVS--AKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPL--IFGKRSVKGSM 303 (360)
Q Consensus 228 ~g~~~~v~~~~~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~--~~~~~~i~~~~ 303 (360)
||+++++||++.+. ....++|+|||++| ....+..+.+++ ++|+++.++. ....... ...........
T Consensus 1 LGAd~vidy~~~~~--~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~~~~~~~~~~ 72 (127)
T PF13602_consen 1 LGADEVIDYRDTDF--AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKGRSIRYSFLF 72 (127)
T ss_dssp CT-SEEEETTCSHH--HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHCHHCEEECCC
T ss_pred CCcCEEecCCCccc--cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcccceEEEEEE
Confidence 68999999996544 44789999999999 544446666777 9999999984 1111111 11222222222
Q ss_pred c-C----CHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEE
Q 018158 304 T-G----GMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 304 ~-~----~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
. . ..+.++.+.+++++|++++++ ++||++++.+|++.+++++..||+|+
T Consensus 73 ~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 73 SVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp -H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 1 1 234589999999999999999 79999999999999999999999996
No 131
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.42 E-value=7e-12 Score=119.24 Aligned_cols=141 Identities=13% Similarity=0.199 Sum_probs=108.7
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccH-------------HHH------
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNA-------------MQM------ 242 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~-------------~~~------ 242 (360)
.++++|+|+|+|++|+++++.|+.+|++|++++.++++++.+++ +|++.+ ++..+. +..
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~ 241 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL 241 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence 38999999999999999999999999999999999999999999 999855 544321 000
Q ss_pred -HhcCCCcCEEEEcCCCcc-----c-HHHHHHHhccCCEEEEeCCCC-CC--cccChhhHhc-cCcEEEEeecCCHHHHH
Q 018158 243 -QAGKRTLDFILDTVSAKH-----S-LGPILELLKVNGTLSVVGAPE-AP--FELPSFPLIF-GKRSVKGSMTGGMRETQ 311 (360)
Q Consensus 243 -~~~~~~~d~vid~~g~~~-----~-~~~~~~~l~~~G~~v~~g~~~-~~--~~~~~~~~~~-~~~~i~~~~~~~~~~~~ 311 (360)
....+++|++|+|++.+. . .+++++.++++|+++++|... +. .+.+...++. +++++.|......+...
T Consensus 242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p~ 321 (509)
T PRK09424 242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLPT 321 (509)
T ss_pred HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHHH
Confidence 111267999999998632 4 499999999999999999853 33 4454556665 89999998765543344
Q ss_pred HHHHHHhcCCCcc
Q 018158 312 EMMNVCGKYNITC 324 (360)
Q Consensus 312 ~~~~~l~~~~l~~ 324 (360)
++.+++.++.+..
T Consensus 322 ~As~lla~~~i~l 334 (509)
T PRK09424 322 QSSQLYGTNLVNL 334 (509)
T ss_pred HHHHHHHhCCccH
Confidence 5888888877643
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.68 E-value=2.1e-07 Score=88.64 Aligned_cols=120 Identities=16% Similarity=0.224 Sum_probs=87.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe-eCcc-------------HHH-------H
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI-LSTN-------------AMQ-------M 242 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~-------------~~~-------~ 242 (360)
++++++|+|+|.+|++++++++.+|++|+++++++++++.+++ +|++.+. +..+ .+. .
T Consensus 163 p~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~ 241 (511)
T TIGR00561 163 PPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELF 241 (511)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHHH
Confidence 6789999999999999999999999999999999999999998 9987632 2211 000 1
Q ss_pred HhcCCCcCEEEEcC---CCcc---cHHHHHHHhccCCEEEEeCCCCC-CcccCh-hhHh--ccCcEEEEeec
Q 018158 243 QAGKRTLDFILDTV---SAKH---SLGPILELLKVNGTLSVVGAPEA-PFELPS-FPLI--FGKRSVKGSMT 304 (360)
Q Consensus 243 ~~~~~~~d~vid~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-~~~~--~~~~~i~~~~~ 304 (360)
.+..+++|++|+|+ |... ..++.++.|++|+.+++++...+ .+.... ...+ .+++.+.+...
T Consensus 242 ~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~n 313 (511)
T TIGR00561 242 AAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYTD 313 (511)
T ss_pred HHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeCC
Confidence 22257899999999 6543 46788999999999999976543 222211 1112 23477777554
No 133
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.65 E-value=3.6e-07 Score=81.68 Aligned_cols=166 Identities=14% Similarity=0.190 Sum_probs=100.1
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHH---cCCCeEee-CccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKEL---LGADEFIL-STNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~---~g~~~~v~-~~~~~~~~~~~~~~d~vid~ 255 (360)
++++++||.+|+|+ |..++++++..|. +|++++.+++.++.+++. +|...+.. ..+..........+|+|+..
T Consensus 75 ~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD~Vi~~ 153 (272)
T PRK11873 75 LKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVDVIISN 153 (272)
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCceeEEEEc
Confidence 34999999999987 8888888888775 699999999988888763 33322211 11111111113579999854
Q ss_pred C------CCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc---ce
Q 018158 256 V------SAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC---NI 326 (360)
Q Consensus 256 ~------g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~---~i 326 (360)
. .....+..+.+.|++||+++..+..... ..+ ....+...+.+..........++.+++.+..+.. ..
T Consensus 154 ~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~e~~~~l~~aGf~~v~i~~ 230 (272)
T PRK11873 154 CVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-ELP--EEIRNDAELYAGCVAGALQEEEYLAMLAEAGFVDITIQP 230 (272)
T ss_pred CcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-CCC--HHHHHhHHHHhccccCCCCHHHHHHHHHHCCCCceEEEe
Confidence 3 1234588999999999999987654322 111 1111111122111111123445556666544432 22
Q ss_pred -EEECCccHHHHHHHH--HcCCCceeEE
Q 018158 327 -EVIKPDQINEALDRL--ARNDVRYRFV 351 (360)
Q Consensus 327 -~~~~~~~~~~a~~~~--~~~~~~gkvv 351 (360)
..++++++.++++.+ .++...++.+
T Consensus 231 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 258 (272)
T PRK11873 231 KREYRIPDAREFLEDWGIAPGRQLDGYI 258 (272)
T ss_pred ccceecccHHHHHHHhccccccccCceE
Confidence 568899999999988 5555444444
No 134
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.63 E-value=3.8e-07 Score=85.26 Aligned_cols=109 Identities=17% Similarity=0.201 Sum_probs=83.1
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCC
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKR 247 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~ 247 (360)
..+|.++...... .-.|++++|+|.|.+|..+++.++.+|++|+++++++.+...+.. .|.. +.+. .+...
T Consensus 196 ~s~~~ai~rat~~-~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-~G~~-v~~l------~eal~ 266 (425)
T PRK05476 196 ESLLDGIKRATNV-LIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-DGFR-VMTM------EEAAE 266 (425)
T ss_pred hhhHHHHHHhccC-CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-cCCE-ecCH------HHHHh
Confidence 3346666555222 127999999999999999999999999999999999888766666 6654 3221 12235
Q ss_pred CcCEEEEcCCCcccHH-HHHHHhccCCEEEEeCCCCCCc
Q 018158 248 TLDFILDTVSAKHSLG-PILELLKVNGTLSVVGAPEAPF 285 (360)
Q Consensus 248 ~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~ 285 (360)
++|++|+++|....+. ..+..|++++.++++|.....+
T Consensus 267 ~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~Ei 305 (425)
T PRK05476 267 LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDNEI 305 (425)
T ss_pred CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCCcc
Confidence 7999999999876665 6889999999999999876433
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.59 E-value=1.4e-06 Score=78.56 Aligned_cols=111 Identities=15% Similarity=0.143 Sum_probs=85.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.+++++|+|.|.+|+.+++.++.+|++|++++++.++..++++ +|.+.+ .. +...+.-.++|+||+|++......
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-~G~~~~-~~---~~l~~~l~~aDiVI~t~p~~~i~~ 225 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARITE-MGLSPF-HL---SELAEEVGKIDIIFNTIPALVLTK 225 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCeee-cH---HHHHHHhCCCCEEEECCChhhhhH
Confidence 5899999999999999999999999999999999988888887 886533 21 122333467999999997654446
Q ss_pred HHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEE
Q 018158 264 PILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKG 301 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~ 301 (360)
..++.+++++.+++++...+...+ ...-.+++...+
T Consensus 226 ~~l~~~~~g~vIIDla~~pggtd~--~~a~~~Gv~~~~ 261 (296)
T PRK08306 226 EVLSKMPPEALIIDLASKPGGTDF--EYAEKRGIKALL 261 (296)
T ss_pred HHHHcCCCCcEEEEEccCCCCcCe--eehhhCCeEEEE
Confidence 778889999999999987766554 233345556654
No 136
>PLN02494 adenosylhomocysteinase
Probab=98.44 E-value=3.1e-06 Score=79.53 Aligned_cols=103 Identities=19% Similarity=0.136 Sum_probs=79.7
Q ss_pred hchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcC
Q 018158 171 FCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLD 250 (360)
Q Consensus 171 ~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d 250 (360)
+.++.+...+ .-.|++++|+|.|.+|..+++.++.+|++|+++++++.+...+.. .|... ++ . .+.-...|
T Consensus 241 ~d~i~r~t~i-~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~-~G~~v-v~---l---eEal~~AD 311 (477)
T PLN02494 241 PDGLMRATDV-MIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQALM-EGYQV-LT---L---EDVVSEAD 311 (477)
T ss_pred HHHHHHhcCC-ccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHh-cCCee-cc---H---HHHHhhCC
Confidence 4454444332 127999999999999999999999999999999999887767666 67542 21 1 12234689
Q ss_pred EEEEcCCCcccH-HHHHHHhccCCEEEEeCCCC
Q 018158 251 FILDTVSAKHSL-GPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 251 ~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~ 282 (360)
+++++.|....+ ...+..|++++.++++|...
T Consensus 312 VVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 312 IFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred EEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 999999987654 78999999999999999864
No 137
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.42 E-value=3.2e-06 Score=78.63 Aligned_cols=98 Identities=17% Similarity=0.295 Sum_probs=74.7
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCC---C--c
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVS---A--K 259 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g---~--~ 259 (360)
+.+++|+|+|.+|+.+++.++.+|++|++++++.++.+.+.+.++........+.+.+.+.-.++|++|+|++ . .
T Consensus 167 ~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~~p 246 (370)
T TIGR00518 167 PGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAKAP 246 (370)
T ss_pred CceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCCCC
Confidence 4558999999999999999999999999999999988888775665322333333344444568999999983 2 1
Q ss_pred c-cHHHHHHHhccCCEEEEeCCCC
Q 018158 260 H-SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 260 ~-~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
. .....++.+++++.+++++...
T Consensus 247 ~lit~~~l~~mk~g~vIvDva~d~ 270 (370)
T TIGR00518 247 KLVSNSLVAQMKPGAVIVDVAIDQ 270 (370)
T ss_pred cCcCHHHHhcCCCCCEEEEEecCC
Confidence 1 1377888999999999998654
No 138
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.42 E-value=2.2e-06 Score=79.80 Aligned_cols=91 Identities=19% Similarity=0.242 Sum_probs=74.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.|++|+|+|.|.+|+.+++.++.+|++|+++++++.+...+.. .|.. +.+. . +.-.+.|++|+++|....+.
T Consensus 194 ~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~-~G~~-v~~l--e----eal~~aDVVItaTG~~~vI~ 265 (406)
T TIGR00936 194 AGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEAAM-DGFR-VMTM--E----EAAKIGDIFITATGNKDVIR 265 (406)
T ss_pred CcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHh-cCCE-eCCH--H----HHHhcCCEEEECCCCHHHHH
Confidence 8999999999999999999999999999999999887766666 6753 3221 1 12356899999999887676
Q ss_pred -HHHHHhccCCEEEEeCCCC
Q 018158 264 -PILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 264 -~~~~~l~~~G~~v~~g~~~ 282 (360)
..+..+++++.++.+|...
T Consensus 266 ~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 266 GEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred HHHHhcCCCCcEEEEECCCC
Confidence 4889999999999998764
No 139
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.21 E-value=6.9e-07 Score=88.18 Aligned_cols=118 Identities=19% Similarity=0.186 Sum_probs=74.4
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC---------------------hhHHHHHHHHcCCCeEeeCcc-HH
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTS---------------------PSKEKEAKELLGADEFILSTN-AM 240 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~---------------------~~~~~~~~~~~g~~~~v~~~~-~~ 240 (360)
.+|++|+|+|+|+.|+++++.++..|++|++++.. ..+++.+++ +|++..++... .+
T Consensus 135 ~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~-~Gv~~~~~~~~~~~ 213 (564)
T PRK12771 135 DTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILD-LGVEVRLGVRVGED 213 (564)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHH-CCCEEEeCCEECCc
Confidence 48999999999999999999999999999999853 345677777 99876665433 11
Q ss_pred -HHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEe
Q 018158 241 -QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGS 302 (360)
Q Consensus 241 -~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~ 302 (360)
.......++|+||+++|........+.....+|.+..++......... .....+++.+.|.
T Consensus 214 ~~~~~~~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~~l~~~~~~~-~~~~gk~v~ViGg 275 (564)
T PRK12771 214 ITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFLRAVGEGE-PPFLGKRVVVIGG 275 (564)
T ss_pred CCHHHHHhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHHHHHHhhccC-CcCCCCCEEEECC
Confidence 112224579999999997644333333344445554443221111111 1233456666664
No 140
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.19 E-value=3e-07 Score=86.93 Aligned_cols=160 Identities=13% Similarity=0.182 Sum_probs=101.7
Q ss_pred ccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecce
Q 018158 68 VPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRF 147 (360)
Q Consensus 68 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~ 147 (360)
.-|.|+++.+.+|++++++.-+|+- .. |+-|-+| |+.|..... .|...++.|++++.++. .
T Consensus 89 ~~~~~a~~hl~~Va~GldS~V~GE~-----qI--~gQvk~a----~~~a~~~~~-------~g~~l~~lf~~a~~~~k-~ 149 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDSMVVGET-----QI--LGQVKNA----YKVAQEEKT-------VGKVLERLFQKAFSVGK-R 149 (417)
T ss_pred cCchHHHHHHHHHHhhhhhhhcCCh-----HH--HHHHHHH----HHHHHHcCC-------chHHHHHHHHHHHHHhh-h
Confidence 4689999999999999877433332 22 5555555 555554322 12245688999988775 3
Q ss_pred eEE---C-CCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHH
Q 018158 148 VVH---V-PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEK 222 (360)
Q Consensus 148 ~~~---i-P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~ 222 (360)
+.. | +..+|...+| .-.+....+. .++++++|+|+|.+|..+++.++..| .+|+++.++.++..
T Consensus 150 vr~~t~i~~~~vSv~~~A--------v~la~~~~~~---l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~ 218 (417)
T TIGR01035 150 VRTETDISAGAVSISSAA--------VELAERIFGS---LKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAE 218 (417)
T ss_pred hhhhcCCCCCCcCHHHHH--------HHHHHHHhCC---ccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHH
Confidence 222 3 2233322221 0111222221 27899999999999999999999999 47999999988866
Q ss_pred HHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 223 EAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 223 ~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
.+.+.+|.. .+... ...+.-.++|+||+|++....
T Consensus 219 ~la~~~g~~-~i~~~---~l~~~l~~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 219 DLAKELGGE-AVKFE---DLEEYLAEADIVISSTGAPHP 253 (417)
T ss_pred HHHHHcCCe-EeeHH---HHHHHHhhCCEEEECCCCCCc
Confidence 555547764 33322 222334579999999987644
No 141
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.17 E-value=6e-05 Score=67.57 Aligned_cols=110 Identities=15% Similarity=0.143 Sum_probs=81.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.|++++|+|.|.+|.+++..++.+|++|++++++.++...+.+ +|...+ .. +...+.-.++|+++++++....-.
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~-~g~~~~-~~---~~l~~~l~~aDiVint~P~~ii~~ 224 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARITE-MGLIPF-PL---NKLEEKVAEIDIVINTIPALVLTA 224 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCeee-cH---HHHHHHhccCCEEEECCChHHhCH
Confidence 5789999999999999999999999999999999988777766 675322 21 122333468999999997653335
Q ss_pred HHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEE
Q 018158 264 PILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVK 300 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~ 300 (360)
..++.++++..+++++..++..++ ...-..++...
T Consensus 225 ~~l~~~k~~aliIDlas~Pg~tdf--~~Ak~~G~~a~ 259 (287)
T TIGR02853 225 DVLSKLPKHAVIIDLASKPGGTDF--EYAKKRGIKAL 259 (287)
T ss_pred HHHhcCCCCeEEEEeCcCCCCCCH--HHHHHCCCEEE
Confidence 677889999899999887766555 33334444444
No 142
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.13 E-value=1.7e-05 Score=74.73 Aligned_cols=91 Identities=20% Similarity=0.272 Sum_probs=74.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.|++++|+|.|.+|..+++.++.+|++|+++++++.+...+.. .|...+ + +.+.-+..|+++.++|....+.
T Consensus 253 aGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~-~G~~~~-~------leell~~ADIVI~atGt~~iI~ 324 (476)
T PTZ00075 253 AGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAAM-EGYQVV-T------LEDVVETADIFVTATGNKDIIT 324 (476)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh-cCceec-c------HHHHHhcCCEEEECCCcccccC
Confidence 7999999999999999999999999999999988777655555 565322 1 1223457999999998776664
Q ss_pred -HHHHHhccCCEEEEeCCCC
Q 018158 264 -PILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 264 -~~~~~l~~~G~~v~~g~~~ 282 (360)
..++.|++++.++++|...
T Consensus 325 ~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 325 LEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred HHHHhccCCCcEEEEcCCCc
Confidence 8999999999999998764
No 143
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.11 E-value=2.5e-05 Score=68.81 Aligned_cols=134 Identities=19% Similarity=0.245 Sum_probs=83.4
Q ss_pred eeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEe
Q 018158 137 YSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVIS 215 (360)
Q Consensus 137 ~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~ 215 (360)
|.+|.. +...++++++++++..+. -+.+.. .+..+... ..++++||-+|+|. |..++.+++ .|+ +|++++
T Consensus 79 ~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~~~----~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giD 149 (250)
T PRK00517 79 WEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALEKL----VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVD 149 (250)
T ss_pred CcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHHhh----cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEE
Confidence 344433 667789999998887654 221211 12233321 23889999999987 887776655 566 599999
Q ss_pred CChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc---ccHHHHHHHhccCCEEEEeCCCC
Q 018158 216 TSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 216 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.++...+.+++.+....+-+.. ........+|+|+...... ..++.+.+.|+++|+++..|...
T Consensus 150 is~~~l~~A~~n~~~~~~~~~~---~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~~ 216 (250)
T PRK00517 150 IDPQAVEAARENAELNGVELNV---YLPQGDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGILE 216 (250)
T ss_pred CCHHHHHHHHHHHHHcCCCceE---EEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECcH
Confidence 9999888877743211110000 0000011699998655432 23568889999999999887543
No 144
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.10 E-value=2.4e-07 Score=87.80 Aligned_cols=163 Identities=15% Similarity=0.209 Sum_probs=99.6
Q ss_pred ccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecce
Q 018158 68 VPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRF 147 (360)
Q Consensus 68 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~ 147 (360)
.-|||+++.+.+|+++.++.-+|+.= -|.+|+ +.+..|..... .|...++.|++.+.++
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~q----------IlgQvk-~a~~~a~~~g~-------~g~~l~~lf~~a~~~~--- 149 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQ----------ILGQVK-DAYALAQEAGT-------VGTILNRLFQKAFSVA--- 149 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChH----------HHHHHH-HHHHHHHHcCC-------chHHHHHHHHHHHHHH---
Confidence 45999999999999998774444432 256666 33444433211 0113345565554443
Q ss_pred eEECCCCCCccccccccchhhhhhchhhccCCC-CCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHH
Q 018158 148 VVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI-DSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAK 225 (360)
Q Consensus 148 ~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~-~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~ 225 (360)
+.+..+.+. ...+...+++++...... .-.++++++|+|+|.+|.++++.++..|+ +|+++.++.++...+.
T Consensus 150 -----k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la 223 (423)
T PRK00045 150 -----KRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELA 223 (423)
T ss_pred -----hhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence 333322221 111233335555433211 01278999999999999999999999998 7999999998877555
Q ss_pred HHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 226 ELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 226 ~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
+.+|.+ +++.. .....-.++|+||+|+|....
T Consensus 224 ~~~g~~-~~~~~---~~~~~l~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 224 EEFGGE-AIPLD---ELPEALAEADIVISSTGAPHP 255 (423)
T ss_pred HHcCCc-EeeHH---HHHHHhccCCEEEECCCCCCc
Confidence 548854 33332 222334579999999987643
No 145
>PRK08324 short chain dehydrogenase; Validated
Probab=98.10 E-value=3.4e-05 Score=77.93 Aligned_cols=135 Identities=16% Similarity=0.147 Sum_probs=90.5
Q ss_pred cceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEE
Q 018158 135 GGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTV 213 (360)
Q Consensus 135 g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~ 213 (360)
-++++|..+++..++.+ +.++.+++... +.......+|+++||+|+ |++|..+++.+...|++|++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~------------~~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl 451 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQ------------RMPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVL 451 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhh------------cCCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEE
Confidence 45678888888777777 66666665421 110111226899999998 99999999999999999999
Q ss_pred EeCChhHHHHHHHHcCC--C---eEeeCccHHHHHhc-------CCCcCEEEEcCCCc----------------------
Q 018158 214 ISTSPSKEKEAKELLGA--D---EFILSTNAMQMQAG-------KRTLDFILDTVSAK---------------------- 259 (360)
Q Consensus 214 ~~~~~~~~~~~~~~~g~--~---~~v~~~~~~~~~~~-------~~~~d~vid~~g~~---------------------- 259 (360)
++++.++.+.+.+.++. . ...|..+.+..... ..++|++|+++|..
T Consensus 452 ~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 452 ADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred EeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99999887776664543 1 11244443332221 34799999999831
Q ss_pred ---ccHHHHHHHhcc---CCEEEEeCCCC
Q 018158 260 ---HSLGPILELLKV---NGTLSVVGAPE 282 (360)
Q Consensus 260 ---~~~~~~~~~l~~---~G~~v~~g~~~ 282 (360)
..++.++..+++ +|+++.++...
T Consensus 532 g~~~l~~~~~~~l~~~~~~g~iV~vsS~~ 560 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLGGSIVFIASKN 560 (681)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence 113444666665 68999998754
No 146
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.10 E-value=9.1e-06 Score=73.94 Aligned_cols=111 Identities=16% Similarity=0.194 Sum_probs=78.0
Q ss_pred ceeEECCCCCCccccccccchhhhhhchhhccCCCC-CCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHH
Q 018158 146 RFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLID-SPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKE 223 (360)
Q Consensus 146 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~-~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~ 223 (360)
...+++|+.+..+.++... +...++.++....... --++++|+|+|+|.+|..+++.++..|+ +|++++++.++...
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 4577888988888777554 3344455554433210 0168999999999999999999998876 69999999888766
Q ss_pred HHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 224 AKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 224 ~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
+.+++|.. +++..+ ..+.-..+|+||.|++....
T Consensus 218 la~~~g~~-~~~~~~---~~~~l~~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPLDE---LLELLNEADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeHHH---HHHHHhcCCEEEECCCCCch
Confidence 65658873 333322 22334568999999998754
No 147
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.08 E-value=6.8e-05 Score=63.98 Aligned_cols=75 Identities=15% Similarity=0.203 Sum_probs=59.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC----CeEeeCccHHH-------HHhcCCCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA----DEFILSTNAMQ-------MQAGKRTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~----~~~v~~~~~~~-------~~~~~~~~d~ 251 (360)
.++.++|+|| +++|.+.++.+...|++|+.++|..++++.++.+++. -..+|-.+.+. ....-..+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 5688999999 9999999999999999999999999999999998983 12234444422 1222567999
Q ss_pred EEEcCCC
Q 018158 252 ILDTVSA 258 (360)
Q Consensus 252 vid~~g~ 258 (360)
+++..|.
T Consensus 85 LvNNAGl 91 (246)
T COG4221 85 LVNNAGL 91 (246)
T ss_pred EEecCCC
Confidence 9999984
No 148
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.98 E-value=2.4e-05 Score=61.97 Aligned_cols=95 Identities=17% Similarity=0.291 Sum_probs=66.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCC--eEeeCccHHHHHhcCCCcCEEEEcCCCcc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGAD--EFILSTNAMQMQAGKRTLDFILDTVSAKH 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~~~~~d~vid~~g~~~ 260 (360)
.+++++|+|+|++|.+++..+...|++ |+++.|+.++.+.+.+.++.. ..+...+. ...-..+|++|+|++...
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~---~~~~~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDL---EEALQEADIVINATPSGM 87 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGH---CHHHHTESEEEE-SSTTS
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHH---HHHHhhCCeEEEecCCCC
Confidence 689999999999999999999999995 999999999988888877432 23444333 223457999999998653
Q ss_pred c--HHHHHHHhcc-CCEEEEeCCC
Q 018158 261 S--LGPILELLKV-NGTLSVVGAP 281 (360)
Q Consensus 261 ~--~~~~~~~l~~-~G~~v~~g~~ 281 (360)
. ....+..... -+.+++++.+
T Consensus 88 ~~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 88 PIITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp TSSTHHHHTTTCHHCSEEEES-SS
T ss_pred cccCHHHHHHHHhhhhceeccccC
Confidence 2 1222222222 1577888754
No 149
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.91 E-value=0.00023 Score=57.30 Aligned_cols=95 Identities=21% Similarity=0.361 Sum_probs=68.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL- 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~- 262 (360)
.|++++|+|-|-+|.-.++.++.+|++|++++.++-+.-++.. -|.. +. ...+.-...|++|.++|....+
T Consensus 22 ~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-dGf~-v~------~~~~a~~~adi~vtaTG~~~vi~ 93 (162)
T PF00670_consen 22 AGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAAM-DGFE-VM------TLEEALRDADIFVTATGNKDVIT 93 (162)
T ss_dssp TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-TT-E-EE-------HHHHTTT-SEEEE-SSSSSSB-
T ss_pred CCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhhh-cCcE-ec------CHHHHHhhCCEEEECCCCccccC
Confidence 8999999999999999999999999999999999977666655 4542 22 1233456789999999987643
Q ss_pred HHHHHHhccCCEEEEeCCCCCCcc
Q 018158 263 GPILELLKVNGTLSVVGAPEAPFE 286 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~~~~~ 286 (360)
.+-++.|+++..+..+|.....+.
T Consensus 94 ~e~~~~mkdgail~n~Gh~d~Eid 117 (162)
T PF00670_consen 94 GEHFRQMKDGAILANAGHFDVEID 117 (162)
T ss_dssp HHHHHHS-TTEEEEESSSSTTSBT
T ss_pred HHHHHHhcCCeEEeccCcCceeEe
Confidence 588899999988888887654443
No 150
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.89 E-value=0.00018 Score=63.01 Aligned_cols=75 Identities=13% Similarity=0.135 Sum_probs=58.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe-----E--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE-----F--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-----~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|| +++|...+..+-..|++|+.++|+.+++..+++++.-.+ + +|..+.+..... +..
T Consensus 5 ~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~ 84 (265)
T COG0300 5 KGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGP 84 (265)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCc
Confidence 6889999999 999999999999999999999999999988877665222 2 244444333221 357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+.+|++|.
T Consensus 85 IdvLVNNAG~ 94 (265)
T COG0300 85 IDVLVNNAGF 94 (265)
T ss_pred ccEEEECCCc
Confidence 9999999984
No 151
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.74 E-value=0.00046 Score=57.87 Aligned_cols=94 Identities=20% Similarity=0.243 Sum_probs=69.7
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHH----HHHHHHcCCCeEe-eCccHHHHHhcCCCcCEEEEcC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKE----KEAKELLGADEFI-LSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~----~~~~~~~g~~~~v-~~~~~~~~~~~~~~~d~vid~~ 256 (360)
++++++||=+|+| .|..++-+++..| +|+.+++.++=. ++++. +|...+. ...+...--.....||.|+-+.
T Consensus 70 ~~~g~~VLEIGtG-sGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~-lg~~nV~v~~gDG~~G~~~~aPyD~I~Vta 146 (209)
T COG2518 70 LKPGDRVLEIGTG-SGYQAAVLARLVG-RVVSIERIEELAEQARRNLET-LGYENVTVRHGDGSKGWPEEAPYDRIIVTA 146 (209)
T ss_pred CCCCCeEEEECCC-chHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHH-cCCCceEEEECCcccCCCCCCCcCEEEEee
Confidence 5699999999986 4999999999988 999999988733 34444 7864443 2222211111246799999888
Q ss_pred CCcccHHHHHHHhccCCEEEEe
Q 018158 257 SAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 257 g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
+....-...++.|++||+++..
T Consensus 147 aa~~vP~~Ll~QL~~gGrlv~P 168 (209)
T COG2518 147 AAPEVPEALLDQLKPGGRLVIP 168 (209)
T ss_pred ccCCCCHHHHHhcccCCEEEEE
Confidence 8877778999999999999765
No 152
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=97.69 E-value=0.00029 Score=61.97 Aligned_cols=96 Identities=18% Similarity=0.328 Sum_probs=79.4
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcC---CCc---
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTV---SAK--- 259 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~---g~~--- 259 (360)
.+|.|+|+|.+|.-++.+|..+|++|++.+.+.+|++.+...|+..-...++....+.+.-.+.|++|.++ |..
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgakaPk 248 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAPK 248 (371)
T ss_pred ccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCCce
Confidence 45778899999999999999999999999999999999988777664555667777777788999999866 221
Q ss_pred ccHHHHHHHhccCCEEEEeCCC
Q 018158 260 HSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 260 ~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
...++.++.|++|+.++++..-
T Consensus 249 Lvt~e~vk~MkpGsVivDVAiD 270 (371)
T COG0686 249 LVTREMVKQMKPGSVIVDVAID 270 (371)
T ss_pred ehhHHHHHhcCCCcEEEEEEEc
Confidence 2357889999999999998643
No 153
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.65 E-value=0.00057 Score=51.93 Aligned_cols=94 Identities=22% Similarity=0.281 Sum_probs=66.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHH-HcCCeEEEEeCChhHHHHHHHHc---CC-CeE-eeCccHHHHHhcCCCcCEEEEcC-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGK-AFGHHVTVISTSPSKEKEAKELL---GA-DEF-ILSTNAMQMQAGKRTLDFILDTV- 256 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~-~~G~~V~~~~~~~~~~~~~~~~~---g~-~~~-v~~~~~~~~~~~~~~~d~vid~~- 256 (360)
|+.+||-+|+|. |..++.+++ ..+++|++++.+++..+.+++++ +. +.+ +...+.........++|+|+...
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~ 79 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSGF 79 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECSG
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECCC
Confidence 678999999965 778888888 57889999999999998888876 22 222 11222212233356799999876
Q ss_pred CCc---------ccHHHHHHHhccCCEEEEe
Q 018158 257 SAK---------HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 257 g~~---------~~~~~~~~~l~~~G~~v~~ 278 (360)
... ..++.+.+.|+++|+++..
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 80 TLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp SGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 221 1267899999999998753
No 154
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.64 E-value=0.0011 Score=59.22 Aligned_cols=74 Identities=18% Similarity=0.224 Sum_probs=55.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHh--------cCCCcCEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQA--------GKRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~--------~~~~~d~vi 253 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++++.+.. .+.+.+ .|..+.+.... .+.++|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-EGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 5688999999 999999999988899999999999988877766 554332 34444432211 135799999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
++.|.
T Consensus 82 ~~Ag~ 86 (277)
T PRK05993 82 NNGAY 86 (277)
T ss_pred ECCCc
Confidence 98863
No 155
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.63 E-value=0.00055 Score=63.28 Aligned_cols=97 Identities=20% Similarity=0.220 Sum_probs=75.8
Q ss_pred cEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcC--C-CeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLG--A-DEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g--~-~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
.++||+|+|.+|..+++.+-+.| .+|++.+|+.++.+++....+ . ...+|..+.+...+.-+++|+||++.+....
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~ 81 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD 81 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence 46899999999999999988888 699999999999999877322 1 3446666666666666778999999998766
Q ss_pred HHHHHHHhccCCEEEEeCCCC
Q 018158 262 LGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 262 ~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+-.+++.+=.++++....
T Consensus 82 ~~i~ka~i~~gv~yvDts~~~ 102 (389)
T COG1748 82 LTILKACIKTGVDYVDTSYYE 102 (389)
T ss_pred HHHHHHHHHhCCCEEEcccCC
Confidence 666667777777777776554
No 156
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.60 E-value=0.0011 Score=56.12 Aligned_cols=95 Identities=17% Similarity=0.198 Sum_probs=67.0
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHH---cC-CCeE--eeCccHHHHHhcCCCcCEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKEL---LG-ADEF--ILSTNAMQMQAGKRTLDFIL 253 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~---~g-~~~~--v~~~~~~~~~~~~~~~d~vi 253 (360)
+.++++++.+|+|. |.+++++++..+ .+|++++.+++..+.++++ +| .+.+ +..+..+........+|.||
T Consensus 38 ~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~D~V~ 116 (198)
T PRK00377 38 LRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEKFDRIF 116 (198)
T ss_pred CCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCCCCEEE
Confidence 45999999999987 999999988764 5899999999888766543 55 3322 22222222233346799999
Q ss_pred EcCCC---cccHHHHHHHhccCCEEEE
Q 018158 254 DTVSA---KHSLGPILELLKVNGTLSV 277 (360)
Q Consensus 254 d~~g~---~~~~~~~~~~l~~~G~~v~ 277 (360)
...+. ...+..+.+.|+++|+++.
T Consensus 117 ~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 117 IGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred ECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 85543 2346788889999999975
No 157
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.59 E-value=0.00038 Score=57.62 Aligned_cols=74 Identities=18% Similarity=0.149 Sum_probs=57.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC--CCeEeeCccHHHHHhc-------CCCcCEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG--ADEFILSTNAMQMQAG-------KRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g--~~~~v~~~~~~~~~~~-------~~~~d~vi 253 (360)
.|.+|||.|+ +++|+..++-...+|-+|++..|++++++.++.... ...+.|-.+.+..++. -...++++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 5889999988 999999999999999999999999999999988443 2344444444332222 34579999
Q ss_pred EcCC
Q 018158 254 DTVS 257 (360)
Q Consensus 254 d~~g 257 (360)
+++|
T Consensus 84 NNAG 87 (245)
T COG3967 84 NNAG 87 (245)
T ss_pred eccc
Confidence 9988
No 158
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.56 E-value=0.00071 Score=60.05 Aligned_cols=97 Identities=14% Similarity=0.193 Sum_probs=74.5
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcCCh-HHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGG-LGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~-vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+..+.+..+++..--- .|++++|+|.|. +|.-++.++...|++|+++.+....+
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l--~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l------------------ 195 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDL--EGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDM------------------ 195 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCC--CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhH------------------
Confidence 457888777777787765333 799999999954 99999999999999999998653221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...-+.+|++|.++|....+.. ++++++..++++|...
T Consensus 196 ---~~~~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 196 ---ASYLKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred ---HHHHhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 1123578999999998765544 5789998999999764
No 159
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.002 Score=57.47 Aligned_cols=72 Identities=15% Similarity=0.170 Sum_probs=53.8
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc-------CCCcCEEEEcC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG-------KRTLDFILDTV 256 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~-------~~~~d~vid~~ 256 (360)
+++||+|+ |++|..+++.+...|++|++++++.++.+.+.. .+...+ .|..+.+..... ..++|++|++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 47899999 999999999999999999999999887776665 554333 355444333221 35799999999
Q ss_pred CC
Q 018158 257 SA 258 (360)
Q Consensus 257 g~ 258 (360)
|.
T Consensus 81 g~ 82 (274)
T PRK05693 81 GY 82 (274)
T ss_pred CC
Confidence 83
No 160
>PRK12742 oxidoreductase; Provisional
Probab=97.54 E-value=0.0015 Score=56.73 Aligned_cols=99 Identities=15% Similarity=0.165 Sum_probs=65.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHcCCCeE-eeCccHHHHHhc---CCCcCEEEEcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-SPSKEKEAKELLGADEF-ILSTNAMQMQAG---KRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~---~~~~d~vid~~g 257 (360)
.++++||+|+ |++|..+++.+...|++|+++.+ +.++.+.+.+.++...+ .|..+.+..... ..++|++|++.|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 5789999999 99999999999999999888765 45555555444664433 344333322221 346999999987
Q ss_pred Ccc---c----------------------HHHHHHHhccCCEEEEeCCCC
Q 018158 258 AKH---S----------------------LGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 258 ~~~---~----------------------~~~~~~~l~~~G~~v~~g~~~ 282 (360)
... . ...+...++..|+++.++...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 421 0 123344566678999887654
No 161
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.52 E-value=0.00035 Score=58.11 Aligned_cols=120 Identities=22% Similarity=0.319 Sum_probs=80.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.|++|.|+|.|.+|...+++++.+|++|++.+++......... .+.. ..+. .+.-...|+|+.+....
T Consensus 35 ~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-~~~~----~~~l---~ell~~aDiv~~~~plt~~T~ 106 (178)
T PF02826_consen 35 RGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-FGVE----YVSL---DELLAQADIVSLHLPLTPETR 106 (178)
T ss_dssp TTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-TTEE----ESSH---HHHHHH-SEEEE-SSSSTTTT
T ss_pred CCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhccc-ccce----eeeh---hhhcchhhhhhhhhccccccc
Confidence 6899999999999999999999999999999999876654444 4431 1122 22334689999888732
Q ss_pred -ccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce-EEECCccHH
Q 018158 260 -HSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI-EVIKPDQIN 335 (360)
Q Consensus 260 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~ 335 (360)
..-.+.+..|+++..+++++.-. .=+-+.+++.+.+|++.-.. .+|.-|.++
T Consensus 107 ~li~~~~l~~mk~ga~lvN~aRG~------------------------~vde~aL~~aL~~g~i~ga~lDV~~~EP~~ 160 (178)
T PF02826_consen 107 GLINAEFLAKMKPGAVLVNVARGE------------------------LVDEDALLDALESGKIAGAALDVFEPEPLP 160 (178)
T ss_dssp TSBSHHHHHTSTTTEEEEESSSGG------------------------GB-HHHHHHHHHTTSEEEEEESS-SSSSSS
T ss_pred eeeeeeeeeccccceEEEeccchh------------------------hhhhhHHHHHHhhccCceEEEECCCCCCCC
Confidence 12368889999999999886432 11456677778888876432 555544333
No 162
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.51 E-value=0.0014 Score=63.69 Aligned_cols=101 Identities=12% Similarity=0.114 Sum_probs=68.8
Q ss_pred CCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc--------CC------C-eEeeCccHHHHHhc
Q 018158 182 SPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL--------GA------D-EFILSTNAMQMQAG 245 (360)
Q Consensus 182 ~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~--------g~------~-~~v~~~~~~~~~~~ 245 (360)
.+.|+++||+|+ |.+|..+++.+...|++|++++|+.++.+.+.+.+ |. . ...|..+.+.+...
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 448999999999 99999999999889999999999988776543321 21 1 11244444455445
Q ss_pred CCCcCEEEEcCCCcc---------------cHHHHHHHhcc--CCEEEEeCCCC
Q 018158 246 KRTLDFILDTVSAKH---------------SLGPILELLKV--NGTLSVVGAPE 282 (360)
Q Consensus 246 ~~~~d~vid~~g~~~---------------~~~~~~~~l~~--~G~~v~~g~~~ 282 (360)
-+++|+||+++|... ....+++.+.. .++||.++...
T Consensus 157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 568999999987531 11233444433 36899887653
No 163
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.49 E-value=0.0011 Score=58.60 Aligned_cols=106 Identities=16% Similarity=0.233 Sum_probs=72.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cC-CCeEe----eCccHHHHH-------hcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LG-ADEFI----LSTNAMQMQ-------AGKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g-~~~~v----~~~~~~~~~-------~~~~ 247 (360)
.|+.|+|+|| +++|.+.+.-.-..|++++.+.+..++++.+.+. .+ .+.++ |-.+.++.. ..-+
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 6899999999 9999987777777899999999888887777222 33 33121 222222222 2267
Q ss_pred CcCEEEEcCCCc-------------------------ccHHHHHHHhccC--CEEEEeCCCCCCcccCh
Q 018158 248 TLDFILDTVSAK-------------------------HSLGPILELLKVN--GTLSVVGAPEAPFELPS 289 (360)
Q Consensus 248 ~~d~vid~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~g~~~~~~~~~~ 289 (360)
++|+.+|..|-. ...+.++..|++. |+|+.+++..+...++.
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~ 159 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF 159 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence 899999998832 1235666677643 99999988776555444
No 164
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.49 E-value=0.0016 Score=56.57 Aligned_cols=99 Identities=21% Similarity=0.294 Sum_probs=68.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC---CCeEe--eCccHHHHHh-------cCCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG---ADEFI--LSTNAMQMQA-------GKRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g---~~~~v--~~~~~~~~~~-------~~~~~d 250 (360)
.+++++|+|+ |.+|..+++.+...|++|+++++++++.+.+.+.+. ..+.+ |-.+.+.... ...++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 5789999999 999999999999999999999999988776643232 11222 2233222211 134689
Q ss_pred EEEEcCCCcc-----------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 251 FILDTVSAKH-----------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 251 ~vid~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.++.+.|... .++.....++++|+++.++...
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 9999887421 1345556667788999887654
No 165
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.48 E-value=0.0015 Score=54.44 Aligned_cols=105 Identities=18% Similarity=0.194 Sum_probs=72.3
Q ss_pred CCcEEEEEcC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEeeCccHHHHHhc--------CCCcCEE
Q 018158 184 AKKRIGIVGL--GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFILSTNAMQMQAG--------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga--g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~--------~~~~d~v 252 (360)
..+.|||+|+ |++|.+.+.-...-|+.|+++.|.-++-..+..++|.. .-+|-.+++...+. .++.|+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 5678999877 99999998888889999999999999888887558842 22344444333221 4678999
Q ss_pred EEcCCCc----------c------------c--HHH--HHHHhccCCEEEEeCCCCCCcccC
Q 018158 253 LDTVSAK----------H------------S--LGP--ILELLKVNGTLSVVGAPEAPFELP 288 (360)
Q Consensus 253 id~~g~~----------~------------~--~~~--~~~~l~~~G~~v~~g~~~~~~~~~ 288 (360)
+|..|.. . . +.+ .--+.+..|+||.+|...+-.+++
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfp 147 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFP 147 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccc
Confidence 9988732 0 0 111 122456789999999876544444
No 166
>PRK06182 short chain dehydrogenase; Validated
Probab=97.45 E-value=0.0021 Score=57.36 Aligned_cols=74 Identities=19% Similarity=0.268 Sum_probs=55.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc-------CCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG-------KRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~-------~~~~d~vid 254 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++++.+.. .+...+ .|-.+.+..... ..++|++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4678999999 999999999988899999999999888776655 454322 344444333222 357999999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
+.|.
T Consensus 81 ~ag~ 84 (273)
T PRK06182 81 NAGY 84 (273)
T ss_pred CCCc
Confidence 9984
No 167
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.45 E-value=0.0014 Score=53.66 Aligned_cols=98 Identities=17% Similarity=0.203 Sum_probs=69.7
Q ss_pred cccccchhhhhhchhhccCCCCCCCCcEEEEEcCCh-HHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc
Q 018158 160 AAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGG-LGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN 238 (360)
Q Consensus 160 aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~-vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 238 (360)
....||...++...++....-- .+++++|+|+|. +|..++..++..|++|+++.++.+++..
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l--~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~--------------- 83 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDL--AGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE--------------- 83 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCC--CCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH---------------
Confidence 3456666666666666554323 799999999986 5999999999999999999977432221
Q ss_pred HHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 239 AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 239 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.-..+|+||.+++....+.. +.++++-.+++++.+.
T Consensus 84 ------~l~~aDiVIsat~~~~ii~~--~~~~~~~viIDla~pr 119 (168)
T cd01080 84 ------HTKQADIVIVAVGKPGLVKG--DMVKPGAVVIDVGINR 119 (168)
T ss_pred ------HHhhCCEEEEcCCCCceecH--HHccCCeEEEEccCCC
Confidence 22468999999998654333 3567777778888765
No 168
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.45 E-value=0.0031 Score=51.84 Aligned_cols=98 Identities=18% Similarity=0.193 Sum_probs=67.2
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHH---HcCCC--eEeeCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKE---LLGAD--EFILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~---~~g~~--~~v~~~~~~~~~~~~~~~d~vid~ 255 (360)
+++|+.++=+|+|. |-.++++++.. ..+||++++++++.+..+. +||.+ .++....++...... .+|.+|--
T Consensus 32 ~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~daiFIG 109 (187)
T COG2242 32 PRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPDAIFIG 109 (187)
T ss_pred CCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCCEEEEC
Confidence 56999888889953 66777888433 3489999999987655433 38865 334444443333323 79999965
Q ss_pred CCC--cccHHHHHHHhccCCEEEEeCCC
Q 018158 256 VSA--KHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 256 ~g~--~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
-|. ...++.++..|+++|++|.-...
T Consensus 110 Gg~~i~~ile~~~~~l~~ggrlV~nait 137 (187)
T COG2242 110 GGGNIEEILEAAWERLKPGGRLVANAIT 137 (187)
T ss_pred CCCCHHHHHHHHHHHcCcCCeEEEEeec
Confidence 543 23578999999999999876543
No 169
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.39 E-value=0.001 Score=55.44 Aligned_cols=91 Identities=22% Similarity=0.258 Sum_probs=67.2
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCC----ccc
Q 018158 188 IGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVSA----KHS 261 (360)
Q Consensus 188 vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~----~~~ 261 (360)
|+|+|+ |.+|..+++.+...|.+|+++.|++++.+. . .+.+.+ .|..+.+.+...-.++|+||.+.|. ...
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~-~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~ 77 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--S-PGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDA 77 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--C-TTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--c-cccccceeeehhhhhhhhhhhhcchhhhhhhhhcccccc
Confidence 689999 999999999999999999999999997776 2 343322 3455555566666799999999984 223
Q ss_pred HHHHHHHhccCC--EEEEeCCC
Q 018158 262 LGPILELLKVNG--TLSVVGAP 281 (360)
Q Consensus 262 ~~~~~~~l~~~G--~~v~~g~~ 281 (360)
...+++.++..| +++.++..
T Consensus 78 ~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 78 AKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp HHHHHHHHHHTTSSEEEEEEET
T ss_pred cccccccccccccccceeeecc
Confidence 566667776554 77766543
No 170
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0032 Score=55.77 Aligned_cols=99 Identities=14% Similarity=0.131 Sum_probs=67.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe-E--eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE-F--ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~--v~~~~~~~~~~~-------~~~~d~v 252 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++.+.+.+.++... . .|..+.+..... ...+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5789999999 999999999998999999999999887776666455321 1 244443322221 3568999
Q ss_pred EEcCCCcc------------------------cHHHHHHHh-ccCCEEEEeCCCC
Q 018158 253 LDTVSAKH------------------------SLGPILELL-KVNGTLSVVGAPE 282 (360)
Q Consensus 253 id~~g~~~------------------------~~~~~~~~l-~~~G~~v~~g~~~ 282 (360)
+++.|... ..+.+...| +.+|+++.++...
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~ 139 (261)
T PRK08265 85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSIS 139 (261)
T ss_pred EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchh
Confidence 99987420 122334444 5678999887643
No 171
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0056 Score=54.32 Aligned_cols=99 Identities=13% Similarity=0.103 Sum_probs=66.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCC---eEeeCccHHHHHhc------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GAD---EFILSTNAMQMQAG------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~---~~v~~~~~~~~~~~------~~~~ 249 (360)
.++++||+|+ +++|.++++.+...|++|++++++.++.+.+.+.+ +.+ ...|-.+.+..... -.++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 5789999999 99999999999999999999999988776655433 322 11233333222221 2469
Q ss_pred CEEEEcCCCcc-------------------------cHHHHHHHhcc--CCEEEEeCCCC
Q 018158 250 DFILDTVSAKH-------------------------SLGPILELLKV--NGTLSVVGAPE 282 (360)
Q Consensus 250 d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~ 282 (360)
|+++++.|... ..+.++..|+. .|+++.++...
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~ 146 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVA 146 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCcc
Confidence 99999987421 12445556643 48999887654
No 172
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.33 E-value=0.0066 Score=54.47 Aligned_cols=113 Identities=17% Similarity=0.019 Sum_probs=74.5
Q ss_pred hhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHH-Hc-CCeEEEEeCChhHHHHHHHHcC-CCeEeeCccHHH
Q 018158 166 AGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGK-AF-GHHVTVISTSPSKEKEAKELLG-ADEFILSTNAMQ 241 (360)
Q Consensus 166 ~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~-~~-G~~V~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~ 241 (360)
-+.|.|..-+.+..-.....+.|||..| +-.++.++..++ .. +.+++.+.+. ......++ +| .+.++.|++.+.
T Consensus 117 Lf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~-~N~~Fve~-lg~Yd~V~~Yd~i~~ 194 (314)
T PF11017_consen 117 LFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSA-RNVAFVES-LGCYDEVLTYDDIDS 194 (314)
T ss_pred HHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecC-cchhhhhc-cCCceEEeehhhhhh
Confidence 3455554433332221335577888888 888888888888 33 4578888844 44567777 99 588888877644
Q ss_pred HHhcCCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCC
Q 018158 242 MQAGKRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPE 282 (360)
Q Consensus 242 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 282 (360)
+. ...--+++|..|+......+...+.+. -..+.+|...
T Consensus 195 l~--~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 195 LD--APQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred cc--CCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 32 245677889999988777777777764 3456677644
No 173
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.004 Score=55.24 Aligned_cols=74 Identities=22% Similarity=0.204 Sum_probs=51.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe---EeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE---FILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~ 249 (360)
++++++|+|+ |++|..+++.+...|++|++++++.++.+...+.+ +... ..|..+.+..... ..++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 6789999999 99999999998899999999999887665443322 2221 1244443322221 3468
Q ss_pred CEEEEcCC
Q 018158 250 DFILDTVS 257 (360)
Q Consensus 250 d~vid~~g 257 (360)
|++|.+.|
T Consensus 88 D~vi~~ag 95 (264)
T PRK07576 88 DVLVSGAA 95 (264)
T ss_pred CEEEECCC
Confidence 99998876
No 174
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0038 Score=54.61 Aligned_cols=75 Identities=19% Similarity=0.204 Sum_probs=54.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHH-------hcCCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQ-------AGKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~-------~~~~~~d~v 252 (360)
++++++|+|+ |.+|..+++.+...|++|++++++.++.+.+.+.++.... .|..+.+... ....++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5789999999 9999999999999999999999988777666655664322 2333332221 113579999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|++.|.
T Consensus 85 i~~ag~ 90 (249)
T PRK06500 85 FINAGV 90 (249)
T ss_pred EECCCC
Confidence 999874
No 175
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0065 Score=56.01 Aligned_cols=99 Identities=15% Similarity=0.207 Sum_probs=67.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.+++++|+|+ |++|..+++.+...|++|+++++++++++.+.+. .|.+.. .|..+.+..... -.++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 5688999999 9999999999988999999999998876655432 343322 244444333222 3479
Q ss_pred CEEEEcCCCcc-------------------------cHHHHHHHhcc--CCEEEEeCCCC
Q 018158 250 DFILDTVSAKH-------------------------SLGPILELLKV--NGTLSVVGAPE 282 (360)
Q Consensus 250 d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~ 282 (360)
|++|++.|... ....++..+++ .|+++.++...
T Consensus 87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~ 146 (334)
T PRK07109 87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSAL 146 (334)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChh
Confidence 99999998421 11234555554 58999987654
No 176
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0037 Score=57.52 Aligned_cols=75 Identities=20% Similarity=0.232 Sum_probs=55.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|.++++.+...|++|+++++++++++.+.+. .|.+.. .|-.+.+..... ..++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999 9999999999999999999999999887655442 454322 244444333222 3579
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 86 D~lVnnAG~ 94 (330)
T PRK06139 86 DVWVNNVGV 94 (330)
T ss_pred CEEEECCCc
Confidence 999999983
No 177
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.27 E-value=0.0025 Score=51.57 Aligned_cols=96 Identities=21% Similarity=0.209 Sum_probs=65.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCe-EeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADE-FILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
.+++++|+|+|.+|...++.+...| .+|++++++.++.+.+.+.++... .....+. .+...++|+|+.|++....
T Consensus 18 ~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dvvi~~~~~~~~ 94 (155)
T cd01065 18 KGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDL---EELLAEADLIINTTPVGMK 94 (155)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecch---hhccccCCEEEeCcCCCCC
Confidence 5788999999999999999888886 689999999888777666466421 0111121 2225789999999986532
Q ss_pred ----HHHHHHHhccCCEEEEeCCCC
Q 018158 262 ----LGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 262 ----~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.......++++..+++++...
T Consensus 95 ~~~~~~~~~~~~~~~~~v~D~~~~~ 119 (155)
T cd01065 95 PGDELPLPPSLLKPGGVVYDVVYNP 119 (155)
T ss_pred CCCCCCCCHHHcCCCCEEEEcCcCC
Confidence 111224467777777776543
No 178
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.23 E-value=0.0017 Score=58.29 Aligned_cols=76 Identities=24% Similarity=0.203 Sum_probs=54.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCe-EeeCccHHHHHhcCCCcCEEEEcCCCc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADE-FILSTNAMQMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~d~vid~~g~~ 259 (360)
.+++++|+|+|+.+.+++..+..+|+ +|+++.|+.++.+.+.+.++... +......+.....-..+|+||+|++..
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g 201 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPAD 201 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCC
Confidence 57899999999999999999999998 69999999998888777565321 111111111122235799999999765
No 179
>PRK06484 short chain dehydrogenase; Validated
Probab=97.21 E-value=0.0062 Score=59.75 Aligned_cols=99 Identities=17% Similarity=0.282 Sum_probs=71.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ +++|..+++.+...|++|++++++.++.+.+.+.++.... .|-.+.+..... ...+|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6789999999 9999999999989999999999999888877765664322 344443332221 3569999
Q ss_pred EEcCCCcc--------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 253 LDTVSAKH--------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 253 id~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
|+++|... ..+.++..|+.+|+++.++...
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~ 403 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIA 403 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchh
Confidence 99887420 1244455666679999987654
No 180
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.20 E-value=0.0031 Score=53.23 Aligned_cols=77 Identities=17% Similarity=0.215 Sum_probs=55.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCCe-EeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GADE-FILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~~-~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
.+++++|+|+ |.+|..++..+...|++|+++.|+.++.+.+.+.+ +... ..+..+.+.....-.++|+||.+++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at~ 106 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGA 106 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECCC
Confidence 5789999998 99999888888888999999999988877665533 2221 1233333333344568999999987
Q ss_pred Ccc
Q 018158 258 AKH 260 (360)
Q Consensus 258 ~~~ 260 (360)
...
T Consensus 107 ~g~ 109 (194)
T cd01078 107 AGV 109 (194)
T ss_pred CCc
Confidence 654
No 181
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=97.19 E-value=0.00084 Score=64.78 Aligned_cols=75 Identities=16% Similarity=0.233 Sum_probs=54.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh---------------------hHHHHHHHHcCCCeEeeCccHH--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP---------------------SKEKEAKELLGADEFILSTNAM-- 240 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~---------------------~~~~~~~~~~g~~~~v~~~~~~-- 240 (360)
.+++|+|+|+|+.|+.++..++..|.+|++++..+ ...+.+++ +|.+..++..-..
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~-~Gv~~~~~~~v~~~~ 218 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTA-MGIEFHLNCEVGRDI 218 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHH-CCCEEECCCEeCCcc
Confidence 68899999999999999999999999999998654 23455666 8876554432111
Q ss_pred HHHhcCCCcCEEEEcCCCc
Q 018158 241 QMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~ 259 (360)
.......++|.||.++|..
T Consensus 219 ~~~~~~~~~D~vilAtGa~ 237 (467)
T TIGR01318 219 SLDDLLEDYDAVFLGVGTY 237 (467)
T ss_pred CHHHHHhcCCEEEEEeCCC
Confidence 1112224799999999965
No 182
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.17 E-value=0.0017 Score=57.71 Aligned_cols=71 Identities=18% Similarity=0.287 Sum_probs=54.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCe----EeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADE----FILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~----~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
++++++|+|+|+.+.+++..++..|+ +|+++.|+.+|.+.+.+.++... .....+.+ . ...+|++|||++.
T Consensus 125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~---~-~~~~dliINaTp~ 200 (283)
T COG0169 125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLE---G-LEEADLLINATPV 200 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccc---c-ccccCEEEECCCC
Confidence 58999999999999999999999997 79999999999888887666322 11111111 0 1169999999974
No 183
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.16 E-value=0.0013 Score=54.11 Aligned_cols=96 Identities=15% Similarity=0.255 Sum_probs=66.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeC-------------------cc-HHHHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILS-------------------TN-AMQMQ 243 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~-------------------~~-~~~~~ 243 (360)
+..+++|+|+|.+|+-|+.+++.+|++|++.+...++.+.... .+...+... .. ...+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQLES-LGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHH-TTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhc-ccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 4478999999999999999999999999999999998888877 665433321 11 11222
Q ss_pred hcCCCcCEEEEcC---CCc---ccHHHHHHHhccCCEEEEeCC
Q 018158 244 AGKRTLDFILDTV---SAK---HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 244 ~~~~~~d~vid~~---g~~---~~~~~~~~~l~~~G~~v~~g~ 280 (360)
+.-..+|++|.+. +.. ..-.+.++.|+++..++++..
T Consensus 98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~ 140 (168)
T PF01262_consen 98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC 140 (168)
T ss_dssp HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence 2345689998643 211 123678899999988988854
No 184
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.15 E-value=0.0026 Score=57.01 Aligned_cols=95 Identities=23% Similarity=0.255 Sum_probs=64.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~- 261 (360)
.+++++|+|+|++|.+++..+...| .+|+++.|+.++.+.+.+.++....+.. +. .....-.++|+||+|++....
T Consensus 122 ~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~~~~DivInaTp~g~~~ 199 (278)
T PRK00258 122 KGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEELADFDLIINATSAGMSG 199 (278)
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhccccCCEEEECCcCCCCC
Confidence 5788999999999999999999999 5899999999988777765552210111 10 111223679999999975421
Q ss_pred ----HHHHHHHhccCCEEEEeCC
Q 018158 262 ----LGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 262 ----~~~~~~~l~~~G~~v~~g~ 280 (360)
.......++++..++++-.
T Consensus 200 ~~~~~~~~~~~l~~~~~v~DivY 222 (278)
T PRK00258 200 ELPLPPLPLSLLRPGTIVYDMIY 222 (278)
T ss_pred CCCCCCCCHHHcCCCCEEEEeec
Confidence 0112356666666666643
No 185
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0032 Score=56.94 Aligned_cols=75 Identities=19% Similarity=0.219 Sum_probs=56.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC--CeE---eeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA--DEF---ILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~--~~~---v~~~~~~~~~~~-------~~~~d 250 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++++.+.+.++. ... .|-.+.+..... ..++|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999 9999999999999999999999999888776665652 111 344444332221 35799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|++.|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999984
No 186
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.15 E-value=0.0069 Score=58.29 Aligned_cols=75 Identities=16% Similarity=0.144 Sum_probs=52.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC--hhHHHHHHHHcCCCe-EeeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS--PSKEKEAKELLGADE-FILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~--~~~~~~~~~~~g~~~-~v~~~~~~~~~~~-------~~~~d~v 252 (360)
+++++||+|+ |++|..+++.+...|++|++++++ .++...+.+.++... ..|..+.+..... ..++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 5789999999 999999999999999999999874 334444444356432 2354444332221 3479999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|++.|.
T Consensus 289 i~~AG~ 294 (450)
T PRK08261 289 VHNAGI 294 (450)
T ss_pred EECCCc
Confidence 999983
No 187
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.13 E-value=0.0065 Score=54.69 Aligned_cols=96 Identities=21% Similarity=0.196 Sum_probs=64.2
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHc---CCC-eEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELL---GAD-EFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~---g~~-~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
.++++||-+|+|. |..++.+++ .|+ +|++++.++...+.+++.+ +.. .+...... .......++|+|+....
T Consensus 158 ~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~-~~~~~~~~fDlVvan~~ 234 (288)
T TIGR00406 158 LKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIY-LEQPIEGKADVIVANIL 234 (288)
T ss_pred CCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecc-cccccCCCceEEEEecC
Confidence 3789999999987 887777776 465 8999999998877776643 221 11111110 11112457999986543
Q ss_pred Cc---ccHHHHHHHhccCCEEEEeCCC
Q 018158 258 AK---HSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 258 ~~---~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
.. ..+..+.+.|+++|.++..|..
T Consensus 235 ~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 235 AEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 22 2456788999999999988754
No 188
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.01 Score=52.84 Aligned_cols=75 Identities=20% Similarity=0.253 Sum_probs=54.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC-CCe-EeeCccHHHHH-------hcCCCcCEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG-ADE-FILSTNAMQMQ-------AGKRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g-~~~-~v~~~~~~~~~-------~~~~~~d~vi 253 (360)
.++++||+|+ |++|..+++.+...|++|+++++++++.+.+.+.++ ... ..|..+.+... ..-.++|++|
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4678999999 999999998888889999999999988776655455 221 12444443321 1135799999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
++.|.
T Consensus 84 ~~ag~ 88 (273)
T PRK07825 84 NNAGV 88 (273)
T ss_pred ECCCc
Confidence 99874
No 189
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0041 Score=54.27 Aligned_cols=75 Identities=12% Similarity=0.188 Sum_probs=56.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc---CCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG---KRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~---~~~~d~vid~~g~ 258 (360)
.+++++|+|+ |.+|..+++.+...|++|++++++.++.+.+.+..+...+ .|..+.+..... ..++|++|++.|.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~ 87 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGI 87 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 5789999999 9999999999999999999999998887776664554322 344444332222 3578999999974
No 190
>PRK06196 oxidoreductase; Provisional
Probab=97.12 E-value=0.0093 Score=54.44 Aligned_cols=75 Identities=20% Similarity=0.260 Sum_probs=53.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC-CC-eEeeCccHHHHHhc-------CCCcCEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG-AD-EFILSTNAMQMQAG-------KRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g-~~-~~v~~~~~~~~~~~-------~~~~d~vi 253 (360)
.+++++|+|+ |++|..++..+...|++|++++|+.++.+.+.+.+. .. ...|-.+.+..... ..++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 5689999999 999999998888899999999999887665544332 11 11244444332221 35799999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
+++|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 99873
No 191
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.12 E-value=0.01 Score=51.94 Aligned_cols=75 Identities=13% Similarity=0.144 Sum_probs=53.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC--CC---eEeeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG--AD---EFILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g--~~---~~v~~~~~~~~~~~-------~~~~d 250 (360)
.++++||+|+ |.+|..+++.+...|++|++++|++++.+.+...+. .. ...|..+.+..... ..++|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 5679999999 999999999888889999999999887766655343 11 11233333333221 34689
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|.+.|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99999874
No 192
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.11 E-value=0.0036 Score=55.85 Aligned_cols=95 Identities=17% Similarity=0.128 Sum_probs=66.7
Q ss_pred ccchhhhhhchhhccCCCCCCCCcEEEEEcCCh-HHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH
Q 018158 163 LLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGG-LGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ 241 (360)
Q Consensus 163 l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~-vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~ 241 (360)
.+|+.......++..+..- .|++++|+|.|. +|..++.++...|++|+++.+... .+.+
T Consensus 139 ~p~T~~gii~~L~~~~i~l--~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~---~L~~--------------- 198 (283)
T PRK14192 139 GSATPAGIMRLLKAYNIEL--AGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ---NLPE--------------- 198 (283)
T ss_pred cCCcHHHHHHHHHHcCCCC--CCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch---hHHH---------------
Confidence 3444444444455544323 799999999966 999999999999999998886322 2222
Q ss_pred HHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 242 MQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 242 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.-+++|++++++|.+..+. .++++++..++++|...
T Consensus 199 ---~~~~aDIvI~AtG~~~~v~--~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 199 ---LVKQADIIVGAVGKPELIK--KDWIKQGAVVVDAGFHP 234 (283)
T ss_pred ---HhccCCEEEEccCCCCcCC--HHHcCCCCEEEEEEEee
Confidence 1257999999998765433 36789998998998654
No 193
>PRK06484 short chain dehydrogenase; Validated
Probab=97.11 E-value=0.0099 Score=58.29 Aligned_cols=75 Identities=20% Similarity=0.376 Sum_probs=56.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe---EeeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE---FILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ +++|.++++.+...|++|++++++.++++.+.+.++... ..|..+.+..... ..++|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 6789999999 999999999999999999999999988877766566432 2344444332221 3579999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|++.|.
T Consensus 84 i~nag~ 89 (520)
T PRK06484 84 VNNAGV 89 (520)
T ss_pred EECCCc
Confidence 999874
No 194
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.10 E-value=0.006 Score=51.90 Aligned_cols=95 Identities=11% Similarity=0.049 Sum_probs=65.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
.|++|||+|+|.+|..-++.+...|++|++++.... .+..+.+ .|.-..+. .+.. ...-.++++||-+++.....
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~-~~~i~~~~-~~~~--~~dl~~~~lVi~at~d~~ln 83 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAE-QGGITWLA-RCFD--ADILEGAFLVIAATDDEELN 83 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH-cCCEEEEe-CCCC--HHHhCCcEEEEECCCCHHHH
Confidence 578999999999999999999999999999987643 3344444 34212221 1111 11135799999999987655
Q ss_pred HHHHHHhccCCEEEEeCCCC
Q 018158 263 GPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~ 282 (360)
..+....+..|..+++....
T Consensus 84 ~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 84 RRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred HHHHHHHHHcCCEEEECCCc
Confidence 67777777788887665433
No 195
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.07 E-value=0.0023 Score=47.97 Aligned_cols=89 Identities=20% Similarity=0.209 Sum_probs=62.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.|++|||+|+|.+|..-++.+...|++|+++++.. ...+ +.-... ... +...-.++++||.+++....-.
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~i~~~-~~~---~~~~l~~~~lV~~at~d~~~n~ 75 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI---EFSE---GLIQLI-RRE---FEEDLDGADLVFAATDDPELNE 75 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TSCEEE-ESS----GGGCTTESEEEE-SS-HHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch---hhhh---hHHHHH-hhh---HHHHHhhheEEEecCCCHHHHH
Confidence 68999999999999999999999999999999885 1111 211111 111 1223567999999999887667
Q ss_pred HHHHHhccCCEEEEeCCCC
Q 018158 264 PILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~~~ 282 (360)
.+....+.-|.++.+...+
T Consensus 76 ~i~~~a~~~~i~vn~~D~p 94 (103)
T PF13241_consen 76 AIYADARARGILVNVVDDP 94 (103)
T ss_dssp HHHHHHHHTTSEEEETT-C
T ss_pred HHHHHHhhCCEEEEECCCc
Confidence 7777788888998886654
No 196
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.07 E-value=0.0045 Score=55.07 Aligned_cols=92 Identities=26% Similarity=0.330 Sum_probs=57.0
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC-eE-eeCccHHHHHhcCCCcCEEEEc-
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD-EF-ILSTNAMQMQAGKRTLDFILDT- 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~~-v~~~~~~~~~~~~~~~d~vid~- 255 (360)
+++|++||-+|+| -|-.++.+++..|++|++++.+++..+.++++ .|.. .+ +...+ .......+|.|+..
T Consensus 60 l~~G~~vLDiGcG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D---~~~~~~~fD~IvSi~ 135 (273)
T PF02353_consen 60 LKPGDRVLDIGCG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQD---YRDLPGKFDRIVSIE 135 (273)
T ss_dssp --TT-EEEEES-T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES----GGG---S-SEEEEES
T ss_pred CCCCCEEEEeCCC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee---ccccCCCCCEEEEEe
Confidence 5699999999997 46677788888899999999999988888665 3421 11 22222 22334489998763
Q ss_pred ----CCCc---ccHHHHHHHhccCCEEEE
Q 018158 256 ----VSAK---HSLGPILELLKVNGTLSV 277 (360)
Q Consensus 256 ----~g~~---~~~~~~~~~l~~~G~~v~ 277 (360)
+|.. ..+..+.++|+|+|+++.
T Consensus 136 ~~Ehvg~~~~~~~f~~~~~~LkpgG~~~l 164 (273)
T PF02353_consen 136 MFEHVGRKNYPAFFRKISRLLKPGGRLVL 164 (273)
T ss_dssp EGGGTCGGGHHHHHHHHHHHSETTEEEEE
T ss_pred chhhcChhHHHHHHHHHHHhcCCCcEEEE
Confidence 2221 237889999999999863
No 197
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.06 E-value=0.014 Score=52.04 Aligned_cols=99 Identities=18% Similarity=0.147 Sum_probs=63.9
Q ss_pred CCcEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCChhH---HHHHHHHcCCCeE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-G--GLGHVAVKFGKAFGHHVTVISTSPSK---EKEAKELLGADEF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g--~vG~~aiqla~~~G~~V~~~~~~~~~---~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ + ++|.++++.+...|++|++++++.+. .+.+.+.+|.... .|-.+.+..... ..+
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999 5 89999999998899999999877532 2333222453322 244443332221 357
Q ss_pred cCEEEEcCCCcc-----------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 249 LDFILDTVSAKH-----------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|+++++.|... ..+.++..|+.+|+++.++...
T Consensus 86 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~ 148 (271)
T PRK06505 86 LDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGG 148 (271)
T ss_pred CCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCC
Confidence 999999987320 0123445566678999887654
No 198
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.06 E-value=0.0022 Score=54.61 Aligned_cols=96 Identities=22% Similarity=0.294 Sum_probs=63.8
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHH---cCCCeE-eeCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKEL---LGADEF-ILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~---~g~~~~-v~~~~~~~~~~~~~~~d~vid~ 255 (360)
+++|++||-+|+|. |..++.+++..|. +|+.++++++-.+.+++. +|.+.+ +...+..........||.|+-+
T Consensus 70 l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~apfD~I~v~ 148 (209)
T PF01135_consen 70 LKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEEAPFDRIIVT 148 (209)
T ss_dssp C-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG-SEEEEEES
T ss_pred cCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccccCCCcCEEEEe
Confidence 45999999999863 8888888888875 699999988766555554 444322 2222221111124579999998
Q ss_pred CCCcccHHHHHHHhccCCEEEEe
Q 018158 256 VSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
.+....-...++.|++||+++..
T Consensus 149 ~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 149 AAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp SBBSS--HHHHHTEEEEEEEEEE
T ss_pred eccchHHHHHHHhcCCCcEEEEE
Confidence 88776668899999999999874
No 199
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.013 Score=51.14 Aligned_cols=75 Identities=20% Similarity=0.166 Sum_probs=53.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe---EeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE---FILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~ 249 (360)
++++++|+|+ |++|..++..+...|++|+++++++++.+.+.+.+ +... ..|-.+.+..... ..++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 99999999999999999999999888666554432 3221 1244443332221 2579
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.++|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999985
No 200
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.06 E-value=0.0064 Score=55.37 Aligned_cols=96 Identities=22% Similarity=0.184 Sum_probs=67.5
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHH---cCCCeEeeC-ccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKEL---LGADEFILS-TNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~---~g~~~~v~~-~~~~~~~~~~~~~d~vid~ 255 (360)
++++++||.+|+| .|..++.+++..+. +|++++.+++..+.++++ .|.+.+... .+..........+|+|+.+
T Consensus 78 i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~~~~fD~Ii~~ 156 (322)
T PRK13943 78 LDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPEFAPYDVIFVT 156 (322)
T ss_pred CCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccccCCccEEEEC
Confidence 4489999999997 49999999998864 699999999876665543 555433221 1211111112469999998
Q ss_pred CCCcccHHHHHHHhccCCEEEEe
Q 018158 256 VSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
.+........++.++++|+++..
T Consensus 157 ~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 157 VGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CchHHhHHHHHHhcCCCCEEEEE
Confidence 87665566788999999998763
No 201
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.05 E-value=0.0029 Score=56.78 Aligned_cols=71 Identities=17% Similarity=0.288 Sum_probs=52.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCC----CeEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGA----DEFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~----~~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
.+++++|+|+|++|.+++..+...|+ +|++++|+.++.+.+.+.++. ..+....+ ....-..+|+||+|+.
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~---~~~~~~~aDiVInaTp 201 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSD---LAAALAAADGLVHATP 201 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccc---hHhhhCCCCEEEECCc
Confidence 56899999999999999999999998 799999999888777664531 12222211 1122357999999975
No 202
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.0062 Score=53.66 Aligned_cols=75 Identities=21% Similarity=0.177 Sum_probs=55.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc-------CCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG-------KRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~-------~~~~d~vid 254 (360)
.+++++|+|+ |++|..+++.+...|++|++++++..+.+...+.++...+ .|..+.+..... ..++|+++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999999 9999999999999999999999988776665554554222 344444333221 357899999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
+.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 8874
No 203
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.03 E-value=0.0063 Score=59.10 Aligned_cols=72 Identities=15% Similarity=0.243 Sum_probs=54.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~ 260 (360)
++++++|+|.|..|++++++++..|++|++.+..+++.+.+++ +|... +...... ..-..+|+|+.+.|.+.
T Consensus 11 ~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~-~g~~~-~~~~~~~---~~l~~~D~VV~SpGi~~ 82 (488)
T PRK03369 11 PGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPHAE-RGVAT-VSTSDAV---QQIADYALVVTSPGFRP 82 (488)
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHh-CCCEE-EcCcchH---hHhhcCCEEEECCCCCC
Confidence 7899999999999999999999999999999987777666666 78643 3222211 11246899999998653
No 204
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.03 E-value=0.012 Score=49.84 Aligned_cols=81 Identities=19% Similarity=0.176 Sum_probs=59.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.|++++|+|.|.+|..+++.+...|++|++++++.++.+.+++.+|+. .++..+ .....+|+++.|......-.
T Consensus 27 ~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~-----l~~~~~Dv~vp~A~~~~I~~ 100 (200)
T cd01075 27 EGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPEE-----IYSVDADVFAPCALGGVIND 100 (200)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcchh-----hccccCCEEEecccccccCH
Confidence 678999999999999999999999999999999998888887756753 333211 12236899997665443445
Q ss_pred HHHHHhc
Q 018158 264 PILELLK 270 (360)
Q Consensus 264 ~~~~~l~ 270 (360)
..++.++
T Consensus 101 ~~~~~l~ 107 (200)
T cd01075 101 DTIPQLK 107 (200)
T ss_pred HHHHHcC
Confidence 5556665
No 205
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.02 E-value=0.0043 Score=58.12 Aligned_cols=111 Identities=18% Similarity=0.135 Sum_probs=73.3
Q ss_pred ccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHH
Q 018158 163 LLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQ 241 (360)
Q Consensus 163 l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~ 241 (360)
+..+....+..+.+... ++++++||-+|+| .|..+..+++..|++|++++.+++..+.++++.....+ +...+
T Consensus 148 L~~Aq~~k~~~l~~~l~--l~~g~rVLDIGcG-~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D--- 221 (383)
T PRK11705 148 LEEAQEAKLDLICRKLQ--LKPGMRVLDIGCG-WGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQD--- 221 (383)
T ss_pred HHHHHHHHHHHHHHHhC--CCCCCEEEEeCCC-ccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECc---
Confidence 33344444444433333 4499999999985 47778888988899999999999999998885421111 11111
Q ss_pred HHhcCCCcCEEEEc-----CCC---cccHHHHHHHhccCCEEEEeC
Q 018158 242 MQAGKRTLDFILDT-----VSA---KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 242 ~~~~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g 279 (360)
.......+|.|+.. +|. ...++.+.+.|+++|.++...
T Consensus 222 ~~~l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 222 YRDLNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred hhhcCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 12224579998753 232 234788889999999998653
No 206
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.02 E-value=0.0045 Score=58.29 Aligned_cols=92 Identities=15% Similarity=0.137 Sum_probs=64.6
Q ss_pred EEEEcCChHHHHHHHHHHHcC-C-eEEEEeCChhHHHHHHHHcC-C---CeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 188 IGIVGLGGLGHVAVKFGKAFG-H-HVTVISTSPSKEKEAKELLG-A---DEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 188 vlI~Gag~vG~~aiqla~~~G-~-~V~~~~~~~~~~~~~~~~~g-~---~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
|+|+|+|.+|..+++.+...+ . +|++.+++.++.+.+.+++. . ...+|..+.+.+...-++.|+|++|+|....
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~~ 80 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFFG 80 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGGH
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccchh
Confidence 688999999999999888776 4 89999999999888765422 1 2335666665566666788999999987655
Q ss_pred HHHHHHHhccCCEEEEeC
Q 018158 262 LGPILELLKVNGTLSVVG 279 (360)
Q Consensus 262 ~~~~~~~l~~~G~~v~~g 279 (360)
..-+..+++.+-++++.+
T Consensus 81 ~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 81 EPVARACIEAGVHYVDTS 98 (386)
T ss_dssp HHHHHHHHHHT-EEEESS
T ss_pred HHHHHHHHHhCCCeeccc
Confidence 566667778888888843
No 207
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.01 E-value=0.012 Score=45.22 Aligned_cols=96 Identities=14% Similarity=0.179 Sum_probs=65.1
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHH---cCCC--eEeeCccHHHHHhcCCCcCEEEEcC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKEL---LGAD--EFILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
.++++++-+|+|. |..+..+++..+ .+|++++.++...+.+++. ++.. .++..+-..........+|+|+...
T Consensus 18 ~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~ 96 (124)
T TIGR02469 18 RPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPDRVFIGG 96 (124)
T ss_pred CCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCCEEEECC
Confidence 3778899999976 888888998864 5899999999877776543 3432 2222211111112235899999755
Q ss_pred CCc---ccHHHHHHHhccCCEEEEeC
Q 018158 257 SAK---HSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 257 g~~---~~~~~~~~~l~~~G~~v~~g 279 (360)
+.. ..++.+.+.|+++|+++...
T Consensus 97 ~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 97 SGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred cchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 332 35788999999999997653
No 208
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.012 Score=51.87 Aligned_cols=73 Identities=21% Similarity=0.206 Sum_probs=52.8
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC-CC---eEeeCccHHHHHh----c----CCCcCEE
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG-AD---EFILSTNAMQMQA----G----KRTLDFI 252 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g-~~---~~v~~~~~~~~~~----~----~~~~d~v 252 (360)
+++||+|+ |.+|..+++.+...|++|++++++.++.+.+.+.++ .. ...|-.+.+.... . ..++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 57899999 999999999888899999999999988777765443 11 1234444332221 1 3578999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
+.+.|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 999984
No 209
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.01 E-value=0.0047 Score=55.62 Aligned_cols=75 Identities=12% Similarity=0.242 Sum_probs=50.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCh---hHHHHHHHHcC---CC---eEeeCccHHHHHhcCCCcCEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSP---SKEKEAKELLG---AD---EFILSTNAMQMQAGKRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~---~~~~~~~~~~g---~~---~~v~~~~~~~~~~~~~~~d~vi 253 (360)
.+++++|+|+|++|.+++..+...|++ |+++.|+. ++.+.+.+.+. .. ...+..+.+.....-..+|+++
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilI 204 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILV 204 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEE
Confidence 578999999999999999888889995 99999986 55544443342 11 1123333222333335679999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
+|+..
T Consensus 205 NaTp~ 209 (289)
T PRK12548 205 NATLV 209 (289)
T ss_pred EeCCC
Confidence 99863
No 210
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0086 Score=51.98 Aligned_cols=75 Identities=19% Similarity=0.112 Sum_probs=52.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC---CeE--eeCccHHHHHh-------cCCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA---DEF--ILSTNAMQMQA-------GKRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~---~~~--v~~~~~~~~~~-------~~~~~d 250 (360)
++++++|+|+ |.+|..+++.+...|++|+++++++++.+.+.+.+.. -+. .|..+...... ...++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999 9999999888888899999999998877666543431 111 23333322211 124799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|++.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99998874
No 211
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.96 E-value=0.015 Score=47.25 Aligned_cols=88 Identities=20% Similarity=0.124 Sum_probs=56.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.|++|+|+|+|.+|..-++.+...|++|++++ ++..+.+.+ ++... ...... ....-.++|+|+-+++.... +
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIs--p~~~~~l~~-l~~i~-~~~~~~--~~~dl~~a~lViaaT~d~e~-N 84 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGAFVTVVS--PEICKEMKE-LPYIT-WKQKTF--SNDDIKDAHLIYAATNQHAV-N 84 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEc--CccCHHHHh-ccCcE-EEeccc--ChhcCCCceEEEECCCCHHH-H
Confidence 68999999999999999999888999999885 333344444 54211 111111 11124679999999988764 4
Q ss_pred HHHHHhccCCEEEEe
Q 018158 264 PILELLKVNGTLSVV 278 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~ 278 (360)
..+...+..+.++..
T Consensus 85 ~~i~~~a~~~~~vn~ 99 (157)
T PRK06719 85 MMVKQAAHDFQWVNV 99 (157)
T ss_pred HHHHHHHHHCCcEEE
Confidence 444444433345444
No 212
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.96 E-value=0.0049 Score=54.60 Aligned_cols=75 Identities=21% Similarity=0.147 Sum_probs=54.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eE--eeCccHHHHHh-------cCCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EF--ILSTNAMQMQA-------GKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~--v~~~~~~~~~~-------~~~~~d~v 252 (360)
+++++||+|+ |++|..+++.+...|++|+++++++++.+.+.+.++.. .. .|-.+.+.... ...++|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5789999999 99999999999999999999999988887776655532 11 23333322211 13479999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|++.|.
T Consensus 85 i~~ag~ 90 (263)
T PRK06200 85 VGNAGI 90 (263)
T ss_pred EECCCC
Confidence 999873
No 213
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.024 Score=50.50 Aligned_cols=73 Identities=16% Similarity=0.214 Sum_probs=50.6
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC--e--EeeCccHHHHHh-------cCCCcC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD--E--FILSTNAMQMQA-------GKRTLD 250 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~--~--~v~~~~~~~~~~-------~~~~~d 250 (360)
++++|+|+ |++|..+++.+...|++|+++++++++.+.+.+. .+.. . ..|..+.+.... ...++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 36899999 9999999998888999999999988765554332 2332 1 234444432211 135699
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|++.|.
T Consensus 81 ~lv~~ag~ 88 (272)
T PRK07832 81 VVMNIAGI 88 (272)
T ss_pred EEEECCCC
Confidence 99999974
No 214
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.94 E-value=0.0052 Score=54.52 Aligned_cols=97 Identities=16% Similarity=0.179 Sum_probs=73.7
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+....+..++..+--- .|++++|+|. ..+|.-.+.++...|++|++..+....+
T Consensus 136 ~~~PcTp~aii~lL~~~~i~l--~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l------------------ 195 (285)
T PRK14189 136 LFRPCTPYGVMKMLESIGIPL--RGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDL------------------ 195 (285)
T ss_pred CCcCCCHHHHHHHHHHcCCCC--CCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCH------------------
Confidence 356777777777777765333 7999999999 6669999999999999999876432211
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...-+..|+++-++|....+.. ++++++..++++|...
T Consensus 196 ---~~~~~~ADIVV~avG~~~~i~~--~~ik~gavVIDVGin~ 233 (285)
T PRK14189 196 ---AAHTRQADIVVAAVGKRNVLTA--DMVKPGATVIDVGMNR 233 (285)
T ss_pred ---HHHhhhCCEEEEcCCCcCccCH--HHcCCCCEEEEccccc
Confidence 1224578999999998765444 8999999999999754
No 215
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.94 E-value=0.01 Score=50.81 Aligned_cols=95 Identities=23% Similarity=0.321 Sum_probs=65.3
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHc---CCCe--EeeCccHHHHHhcCCCcCEEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKELL---GADE--FILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~~---g~~~--~v~~~~~~~~~~~~~~~d~vid 254 (360)
++++++||-+|+|. |..+..+++..+ .+|+.++.+++-.+.+++++ |... ++..+..... .....||+|+-
T Consensus 74 ~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~-~~~~~fD~I~~ 151 (212)
T PRK13942 74 LKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGY-EENAPYDRIYV 151 (212)
T ss_pred CCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-CcCCCcCEEEE
Confidence 44999999999863 777777887765 58999999998877776643 4322 2222111111 11357999986
Q ss_pred cCCCcccHHHHHHHhccCCEEEEe
Q 018158 255 TVSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 255 ~~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
............+.|++||+++..
T Consensus 152 ~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 152 TAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred CCCcccchHHHHHhhCCCcEEEEE
Confidence 655555668899999999998765
No 216
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.93 E-value=0.0098 Score=47.12 Aligned_cols=97 Identities=12% Similarity=0.030 Sum_probs=72.8
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||........+++.+.-- .|++++|+|. ..+|.-++.++...|++|+.+.++...++.
T Consensus 6 ~~~p~t~~a~~~ll~~~~~~~--~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~---------------- 67 (140)
T cd05212 6 LFVSPVAKAVKELLNKEGVRL--DGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS---------------- 67 (140)
T ss_pred cccccHHHHHHHHHHHcCCCC--CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH----------------
Confidence 356677666666676665322 7999999999 999999999999999999999865432221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.-+..|+++.++|....+. -+++++|-.++++|...
T Consensus 68 -----~v~~ADIVvsAtg~~~~i~--~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 68 -----KVHDADVVVVGSPKPEKVP--TEWIKPGATVINCSPTK 103 (140)
T ss_pred -----HHhhCCEEEEecCCCCccC--HHHcCCCCEEEEcCCCc
Confidence 2356899999999874433 47899999999888654
No 217
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.93 E-value=0.0066 Score=55.67 Aligned_cols=93 Identities=19% Similarity=0.205 Sum_probs=66.6
Q ss_pred CCcEEEEEcCChHHHHHHHHH-HHcCC-eEEEEeCChhHHHHHHHHc----CCCeEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFG-KAFGH-HVTVISTSPSKEKEAKELL----GADEFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla-~~~G~-~V~~~~~~~~~~~~~~~~~----g~~~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
..+++.|+|+|..|...+..+ ...++ +|.++++++++.+.+.+.+ +.+ +....+. .+.-...|+|+.|++
T Consensus 126 ~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~~~---~~~~~~aDiVi~aT~ 201 (325)
T PRK08618 126 DAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVNSA---DEAIEEADIIVTVTN 201 (325)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeCCH---HHHHhcCCEEEEccC
Confidence 467899999999998776554 45677 6999999998877666533 432 2222332 223367999999998
Q ss_pred CcccHHHHHHHhccCCEEEEeCCCC
Q 018158 258 AKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 258 ~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+-. +++++|-++..+|...
T Consensus 202 s~~p~i~--~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 202 AKTPVFS--EKLKKGVHINAVGSFM 224 (325)
T ss_pred CCCcchH--HhcCCCcEEEecCCCC
Confidence 7754333 8999999999999765
No 218
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.92 E-value=0.0083 Score=54.59 Aligned_cols=91 Identities=21% Similarity=0.335 Sum_probs=64.4
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc--
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS-- 261 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~-- 261 (360)
.+|.|+|+|.+|...+..++..|. +|+++++++++.+.+++ .|....+.. +. .......|+||.|+.....
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~-~g~~~~~~~-~~---~~~~~~aDvViiavp~~~~~~ 81 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARE-LGLGDRVTT-SA---AEAVKGADLVILCVPVGASGA 81 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHh-CCCCceecC-CH---HHHhcCCCEEEECCCHHHHHH
Confidence 579999999999999999888885 79999999998888877 775322211 11 1223578999999986432
Q ss_pred -HHHHHHHhccCCEEEEeCCC
Q 018158 262 -LGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 262 -~~~~~~~l~~~G~~v~~g~~ 281 (360)
+..+...++++..++++|..
T Consensus 82 v~~~l~~~l~~~~iv~dvgs~ 102 (307)
T PRK07502 82 VAAEIAPHLKPGAIVTDVGSV 102 (307)
T ss_pred HHHHHHhhCCCCCEEEeCccc
Confidence 23344456677777777653
No 219
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.92 E-value=0.006 Score=54.11 Aligned_cols=97 Identities=15% Similarity=0.074 Sum_probs=74.4
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
...||+..+.+..++..+.-- .|++++|+|- ..+|.-+++++...|++|++..+....+
T Consensus 137 ~~~PcTp~av~~ll~~~~i~l--~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l------------------ 196 (285)
T PRK10792 137 LLRPCTPRGIMTLLERYGIDT--YGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNL------------------ 196 (285)
T ss_pred CCCCCCHHHHHHHHHHcCCCC--CCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCH------------------
Confidence 356888777788887765322 6999999999 6699999999999999999998543221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+..+.+|+++.++|....+.. ++++++..++++|...
T Consensus 197 ---~~~~~~ADIvi~avG~p~~v~~--~~vk~gavVIDvGin~ 234 (285)
T PRK10792 197 ---RHHVRNADLLVVAVGKPGFIPG--EWIKPGAIVIDVGINR 234 (285)
T ss_pred ---HHHHhhCCEEEEcCCCcccccH--HHcCCCcEEEEccccc
Confidence 1224579999999998865443 8899999999999643
No 220
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.89 E-value=0.022 Score=50.92 Aligned_cols=99 Identities=16% Similarity=0.159 Sum_probs=65.7
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCChh---HHHHHHHHcCCCeE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTSPS---KEKEAKELLGADEF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~~~---~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ +++|.++++.+...|++|++++++.+ +.+.+.+.++.... .|-.+.+..... ..+
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5789999997 48999999988889999999998753 34444333553322 344443322211 357
Q ss_pred cCEEEEcCCCcc-----------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 249 LDFILDTVSAKH-----------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|+++++.|... ..+.++..|+.+|+++.++...
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~ 146 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG 146 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence 999999988410 1345566677789999887644
No 221
>PRK09186 flagellin modification protein A; Provisional
Probab=96.89 E-value=0.016 Score=50.85 Aligned_cols=74 Identities=20% Similarity=0.082 Sum_probs=52.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCC---e-EeeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GAD---E-FILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~---~-~v~~~~~~~~~~~-------~~ 247 (360)
.+++++|+|+ |.+|...+..+...|++|++++++.++.+.+.+.+ +.. . ..|-.+.+..... ..
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5789999999 99999999999999999999999888766554433 221 1 2244444333222 24
Q ss_pred CcCEEEEcCC
Q 018158 248 TLDFILDTVS 257 (360)
Q Consensus 248 ~~d~vid~~g 257 (360)
++|++|++.+
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 5899999885
No 222
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.019 Score=50.24 Aligned_cols=97 Identities=19% Similarity=0.138 Sum_probs=61.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHH---cCCCe---EeeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKEL---LGADE---FILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~ 248 (360)
.+++++|+|+ |.+|..++..+...|++|+++.++.+ +.+.+... .+... ..|..+.+..... ..+
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 5689999999 99999999988889999999888653 33333221 23221 1244444332211 246
Q ss_pred cCEEEEcCCCc-------------------ccHHHHHHHhccCCEEEEeCC
Q 018158 249 LDFILDTVSAK-------------------HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 249 ~d~vid~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~ 280 (360)
+|+++.+.|.. ..++.+...++..|+++.++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 89999887642 123445555556688888865
No 223
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.88 E-value=0.012 Score=49.99 Aligned_cols=93 Identities=18% Similarity=0.096 Sum_probs=58.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
.|++|||+|+|.+|...+..+...|++|+++.+... .+..+.. -+.- ....... ....-.++|+||-+++....-
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~-~~~i-~~~~~~~--~~~~l~~adlViaaT~d~elN 84 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVE-EGKI-RWKQKEF--EPSDIVDAFLVIAATNDPRVN 84 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHh-CCCE-EEEecCC--ChhhcCCceEEEEcCCCHHHH
Confidence 688999999999999999988889999999986532 2233222 2211 1111111 111235799999999988654
Q ss_pred HHHHHHhccCCEEEEeCCC
Q 018158 263 GPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~ 281 (360)
..+.... ..+.++.....
T Consensus 85 ~~i~~~a-~~~~lvn~~d~ 102 (202)
T PRK06718 85 EQVKEDL-PENALFNVITD 102 (202)
T ss_pred HHHHHHH-HhCCcEEECCC
Confidence 4444444 44566666443
No 224
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.87 E-value=0.0063 Score=54.40 Aligned_cols=97 Identities=16% Similarity=0.124 Sum_probs=74.6
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+....+..|+..+.-- .|++|.|+|. +.+|.-.+.++...|++|++..+.....
T Consensus 137 ~~~PcTp~aii~lL~~~~i~l--~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l------------------ 196 (301)
T PRK14194 137 VLTPCTPSGCLRLLEDTCGDL--TGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDA------------------ 196 (301)
T ss_pred CCCCCcHHHHHHHHHHhCCCC--CCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCH------------------
Confidence 457888777787887765323 7999999999 6999999999999999999997554311
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+..+..|+|+-++|....+... ++++|..++++|...
T Consensus 197 ---~e~~~~ADIVIsavg~~~~v~~~--~ik~GaiVIDvgin~ 234 (301)
T PRK14194 197 ---KALCRQADIVVAAVGRPRLIDAD--WLKPGAVVIDVGINR 234 (301)
T ss_pred ---HHHHhcCCEEEEecCChhcccHh--hccCCcEEEEecccc
Confidence 12235689999999988665554 489999999998653
No 225
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.87 E-value=0.0064 Score=54.07 Aligned_cols=78 Identities=15% Similarity=0.267 Sum_probs=55.5
Q ss_pred hhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCC
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRT 248 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~ 248 (360)
.+.+++..+ ...+++++|+|+|+.+.+++..+...|+ +|+++.|+.++.+.+.+.++... .+ .. ....
T Consensus 110 f~~~L~~~~---~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~~--~~--~~~~ 178 (272)
T PRK12550 110 IAKLLASYQ---VPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----RP--DL--GGIE 178 (272)
T ss_pred HHHHHHhcC---CCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----hh--hc--cccc
Confidence 344554433 2256789999999999999999999998 59999999998887776554211 10 11 1245
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++||+..
T Consensus 179 ~dlvINaTp~ 188 (272)
T PRK12550 179 ADILVNVTPI 188 (272)
T ss_pred CCEEEECCcc
Confidence 8999999863
No 226
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.87 E-value=0.015 Score=50.26 Aligned_cols=99 Identities=20% Similarity=0.260 Sum_probs=73.3
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCC---CeE-eeCccHHHHHhcCCCcCEEEEcCC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGA---DEF-ILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~---~~~-v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
.+|++||=+|+| .|-.+..+++..|- +|++++.+++-++.++++... ..+ +...+.+.+.-....+|+|..+.|
T Consensus 50 ~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~vt~~fg 128 (238)
T COG2226 50 KPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDAVTISFG 128 (238)
T ss_pred CCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCEEEeeeh
Confidence 389999988876 48899999999874 799999999999999887542 111 112222233323677999988777
Q ss_pred C------cccHHHHHHHhccCCEEEEeCCCC
Q 018158 258 A------KHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 258 ~------~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
- ..++.++.+.++|+|+++.+-...
T Consensus 129 lrnv~d~~~aL~E~~RVlKpgG~~~vle~~~ 159 (238)
T COG2226 129 LRNVTDIDKALKEMYRVLKPGGRLLVLEFSK 159 (238)
T ss_pred hhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence 2 346899999999999998887654
No 227
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.87 E-value=0.013 Score=53.46 Aligned_cols=94 Identities=17% Similarity=0.182 Sum_probs=64.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe-eCccHHHHHhcCCCcCEEEEcCCCcc----
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI-LSTNAMQMQAGKRTLDFILDTVSAKH---- 260 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~~~~d~vid~~g~~~---- 260 (360)
+|+|+|+ |-+|..+++.+...|.+|++++|+.++...+.. .+.+.+. |..+.+.....-.++|+||++++...
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~-~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE-WGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh-cCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 6899999 999999999998899999999998766554444 4543332 44444455555568999999876321
Q ss_pred --------cHHHHHHHhccCC--EEEEeCCC
Q 018158 261 --------SLGPILELLKVNG--TLSVVGAP 281 (360)
Q Consensus 261 --------~~~~~~~~l~~~G--~~v~~g~~ 281 (360)
....+++.++..| +++.++..
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 1134455555544 78877653
No 228
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.86 E-value=0.009 Score=52.86 Aligned_cols=75 Identities=17% Similarity=0.104 Sum_probs=53.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe-E--eeCccHHHHHh----c---CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE-F--ILSTNAMQMQA----G---KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~--v~~~~~~~~~~----~---~~~~d~v 252 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++.+.+++..+... . .|..+.+.... . ..++|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5789999999 999999999999999999999999887777766344221 1 23333322211 1 3578999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
+++.|.
T Consensus 84 i~~Ag~ 89 (262)
T TIGR03325 84 IPNAGI 89 (262)
T ss_pred EECCCC
Confidence 999873
No 229
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.021 Score=50.92 Aligned_cols=74 Identities=18% Similarity=0.165 Sum_probs=52.7
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe-E--eeCccHHHHHhc-------CCCcCEEE
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE-F--ILSTNAMQMQAG-------KRTLDFIL 253 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~--v~~~~~~~~~~~-------~~~~d~vi 253 (360)
+++++|+|+ |.+|..+++.+...|++|++++++.++++.+.+.++... . .|..+.+..... -.++|++|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999 999999988888889999999999888777666444221 1 233333222111 34789999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
.+.|.
T Consensus 83 ~~ag~ 87 (275)
T PRK08263 83 NNAGY 87 (275)
T ss_pred ECCCC
Confidence 99984
No 230
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.85 E-value=0.025 Score=49.55 Aligned_cols=72 Identities=18% Similarity=0.307 Sum_probs=52.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHh-------cCCCcCEEEEc
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQA-------GKRTLDFILDT 255 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~-------~~~~~d~vid~ 255 (360)
+++|+|+ |++|..++..+...|++|+++++++++.+.+...++.+.. .|-.+.+.... ...++|.++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6899999 9999999999999999999999998887776654553321 23333322221 13579999998
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
.|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 874
No 231
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.0085 Score=52.91 Aligned_cols=76 Identities=16% Similarity=0.149 Sum_probs=54.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC----eEeeCccHHHHHhc-------CCCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD----EFILSTNAMQMQAG-------KRTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~----~~v~~~~~~~~~~~-------~~~~d~ 251 (360)
+++++||+|+ |.+|..+++.+...|++|++++++.+..+.+.+.++.. ...|..+.+..... -.++|+
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 89 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDV 89 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 7799999999 99999999999999999999999887776665533322 12244443322211 247999
Q ss_pred EEEcCCCc
Q 018158 252 ILDTVSAK 259 (360)
Q Consensus 252 vid~~g~~ 259 (360)
||.+.|..
T Consensus 90 vi~~ag~~ 97 (264)
T PRK12829 90 LVNNAGIA 97 (264)
T ss_pred EEECCCCC
Confidence 99988753
No 232
>PRK04457 spermidine synthase; Provisional
Probab=96.83 E-value=0.027 Score=49.89 Aligned_cols=94 Identities=21% Similarity=0.275 Sum_probs=66.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCC----C--eEeeCccHHHHHhcCCCcCEEE-Ec
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGA----D--EFILSTNAMQMQAGKRTLDFIL-DT 255 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~----~--~~v~~~~~~~~~~~~~~~d~vi-d~ 255 (360)
++++||++|.|+ |.++..+++.. +.+|++++.+++-.+.+++.++. . .++..+..+.......++|+|+ |.
T Consensus 66 ~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~D~ 144 (262)
T PRK04457 66 RPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILVDG 144 (262)
T ss_pred CCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEEeC
Confidence 567899999964 77777787776 56899999999999998886652 1 2333332333444456899997 44
Q ss_pred CCC---------cccHHHHHHHhccCCEEEEe
Q 018158 256 VSA---------KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 256 ~g~---------~~~~~~~~~~l~~~G~~v~~ 278 (360)
... ...+..+.+.|+++|.++..
T Consensus 145 ~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 145 FDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred CCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 321 23468889999999999763
No 233
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.82 E-value=0.0032 Score=63.29 Aligned_cols=75 Identities=15% Similarity=0.225 Sum_probs=55.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh---------------------HHHHHHHHcCCCeEeeCccH--H
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS---------------------KEKEAKELLGADEFILSTNA--M 240 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~---------------------~~~~~~~~~g~~~~v~~~~~--~ 240 (360)
.+++|+|+|+|+.|+.++..++..|++|+++++.+. +.+.+++ +|.+..++..-. .
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~-~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTA-MGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHH-CCeEEEcCCccCCcC
Confidence 489999999999999999999999999999987652 4455566 887655443211 1
Q ss_pred HHHhcCCCcCEEEEcCCCc
Q 018158 241 QMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~ 259 (360)
.+.....++|+||.++|..
T Consensus 388 ~~~~l~~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFSDLTSEYDAVFIGVGTY 406 (639)
T ss_pred CHHHHHhcCCEEEEeCCCC
Confidence 1222345799999999864
No 234
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.81 E-value=0.0074 Score=54.00 Aligned_cols=74 Identities=14% Similarity=0.233 Sum_probs=51.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcC----CCeEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLG----ADEFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g----~~~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
.+++++|+|+|+.+.+++..+...|+ +++++.|+.++.+.+.+.+. ...+. ..+..........+|+|+||+..
T Consensus 126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~-~~~~~~~~~~~~~~divINaTp~ 204 (283)
T PRK14027 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV-GVDARGIEDVIAAADGVVNATPM 204 (283)
T ss_pred CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE-ecCHhHHHHHHhhcCEEEEcCCC
Confidence 57899999999999999888888998 69999999998877766443 21111 11111111122468999999864
No 235
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.81 E-value=0.025 Score=50.05 Aligned_cols=75 Identities=19% Similarity=0.227 Sum_probs=49.1
Q ss_pred CCcEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCChh---HHHHHHHHcCCCeE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-G--GLGHVAVKFGKAFGHHVTVISTSPS---KEKEAKELLGADEF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g--~vG~~aiqla~~~G~~V~~~~~~~~---~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~ 248 (360)
.+++++|+|+ + ++|.++++.+...|++|+++++++. ..+.+.+..|.... .|-.+.+..... ..+
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999 5 7999998888888999999887742 23333332453322 344444332211 356
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++++.|.
T Consensus 87 iDilVnnag~ 96 (260)
T PRK06603 87 FDFLLHGMAF 96 (260)
T ss_pred ccEEEEcccc
Confidence 9999998873
No 236
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.80 E-value=0.0089 Score=53.31 Aligned_cols=94 Identities=18% Similarity=0.119 Sum_probs=63.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC---CeEeeCccHHHHHhcCCCcCEEEEcCCCcc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA---DEFILSTNAMQMQAGKRTLDFILDTVSAKH 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~---~~~v~~~~~~~~~~~~~~~d~vid~~g~~~ 260 (360)
.+++++|+|+|++|.+++..+...|++|+++.|+.++.+.+.+.++. ...+. .+. .....+|++|+|++...
T Consensus 116 ~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~---~~~--~~~~~~DivInatp~gm 190 (270)
T TIGR00507 116 PNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFS---MDE--LPLHRVDLIINATSAGM 190 (270)
T ss_pred cCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEec---hhh--hcccCccEEEECCCCCC
Confidence 57899999999999999888888899999999998887666654432 12211 111 12246999999998531
Q ss_pred --cH---HHHHHHhccCCEEEEeCCCC
Q 018158 261 --SL---GPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 261 --~~---~~~~~~l~~~G~~v~~g~~~ 282 (360)
.. ......++++..++++...+
T Consensus 191 ~~~~~~~~~~~~~l~~~~~v~D~~y~p 217 (270)
T TIGR00507 191 SGNIDEPPVPAEKLKEGMVVYDMVYNP 217 (270)
T ss_pred CCCCCCCCCCHHHcCCCCEEEEeccCC
Confidence 01 11235567777777775433
No 237
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.80 E-value=0.0071 Score=57.10 Aligned_cols=75 Identities=13% Similarity=0.216 Sum_probs=57.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
.+++++|+|+|.+|.+++..+...|+ +++++.|+.++.+.+.+.++...++... .....-..+|+||+|++.+..
T Consensus 180 ~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---~l~~~l~~aDiVI~aT~a~~~ 255 (414)
T PRK13940 180 SSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---ELPQLIKKADIIIAAVNVLEY 255 (414)
T ss_pred cCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---HHHHHhccCCEEEECcCCCCe
Confidence 57899999999999999999999997 6999999988887777767632333322 223334679999999997653
No 238
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.0072 Score=53.07 Aligned_cols=73 Identities=23% Similarity=0.262 Sum_probs=50.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHcCCCe--EeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKELLGADE--FILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~--~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.. +..... .+... ..|-.+.+.....-.++|++|+++|.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND--ESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc--cCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 4789999999 99999999999999999999998762 222211 12111 23444444444444579999999974
No 239
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.79 E-value=0.028 Score=49.49 Aligned_cols=98 Identities=13% Similarity=0.095 Sum_probs=63.0
Q ss_pred CCcEEEEEcCC---hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe----EeeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGLG---GLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE----FILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Gag---~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~----~v~~~~~~~~~~-------~~~~~ 249 (360)
.+++++|+|++ ++|.++++.+...|++|++++++++..+.+++ +.... ..|-.+.+.... ...++
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQK-LVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHh-hccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999984 89999988888899999999987543344444 32111 123333322221 13569
Q ss_pred CEEEEcCCCcc-----------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 250 DFILDTVSAKH-----------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 250 d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
|+++++.|... ..+.++..++.+|+++.++...
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 146 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFG 146 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccC
Confidence 99999887320 0233455666778998886544
No 240
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.77 E-value=0.042 Score=48.54 Aligned_cols=99 Identities=21% Similarity=0.206 Sum_probs=63.6
Q ss_pred CCcEEEEEcCC---hHHHHHHHHHHHcCCeEEEEeCChhH---HHHHHHHcCCCeE--eeCccHHHHHh-------cCCC
Q 018158 184 AKKRIGIVGLG---GLGHVAVKFGKAFGHHVTVISTSPSK---EKEAKELLGADEF--ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Gag---~vG~~aiqla~~~G~~V~~~~~~~~~---~~~~~~~~g~~~~--v~~~~~~~~~~-------~~~~ 248 (360)
.++++||+|++ ++|.++++.+...|++|++++++.+. .+.+.+.++.... .|-.+.+.... ...+
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 57899999983 89999998888899999999987543 2333332443222 23333322221 1357
Q ss_pred cCEEEEcCCCcc-----------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 249 LDFILDTVSAKH-----------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|+++++.|... ..+.++..|+.+|+++.++...
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~ 151 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG 151 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence 999999887310 1244566677778998876543
No 241
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.76 E-value=0.0058 Score=49.52 Aligned_cols=98 Identities=15% Similarity=0.183 Sum_probs=64.4
Q ss_pred cccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc
Q 018158 160 AAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN 238 (360)
Q Consensus 160 aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 238 (360)
...+||+....+..++..+--- .|++++|+|. ..+|.-+..++...|++|+........++.
T Consensus 13 ~~~~PcTp~aii~lL~~~~~~l--~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~--------------- 75 (160)
T PF02882_consen 13 PGFVPCTPLAIIELLEYYGIDL--EGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE--------------- 75 (160)
T ss_dssp TSS--HHHHHHHHHHHHTT-ST--TT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH---------------
T ss_pred CCCcCCCHHHHHHHHHhcCCCC--CCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc---------------
Confidence 3567777777777787765333 7999999999 789999999999999999998865433222
Q ss_pred HHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 239 AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 239 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.-+..|+|+.++|....+. -++++++..++++|...
T Consensus 76 ------~~~~ADIVVsa~G~~~~i~--~~~ik~gavVIDvG~~~ 111 (160)
T PF02882_consen 76 ------ITRRADIVVSAVGKPNLIK--ADWIKPGAVVIDVGINY 111 (160)
T ss_dssp ------HHTTSSEEEE-SSSTT-B---GGGS-TTEEEEE--CEE
T ss_pred ------eeeeccEEeeeeccccccc--cccccCCcEEEecCCcc
Confidence 1246899999999875433 25889998889998754
No 242
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.76 E-value=0.012 Score=52.81 Aligned_cols=75 Identities=11% Similarity=0.152 Sum_probs=49.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCh---hHHHHHHHHcCCC-----eEeeCccHHHHHhcCCCcCEEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSP---SKEKEAKELLGAD-----EFILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~---~~~~~~~~~~g~~-----~~v~~~~~~~~~~~~~~~d~vid 254 (360)
.+++++|+|+|+.+.+++..+...|+ +|+++.|+. ++.+.+.+.++.. .+....+...+.....++|+|++
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivIN 202 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTN 202 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEEE
Confidence 57899999998889987777777898 799999984 4555555545421 11111111112223457999999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
|+..
T Consensus 203 aTp~ 206 (288)
T PRK12749 203 GTKV 206 (288)
T ss_pred CCCC
Confidence 9864
No 243
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.026 Score=49.90 Aligned_cols=75 Identities=16% Similarity=0.242 Sum_probs=52.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc--CCC-eE--eeCccHHHHHhc------CCCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL--GAD-EF--ILSTNAMQMQAG------KRTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~--g~~-~~--v~~~~~~~~~~~------~~~~d~ 251 (360)
+++++||+|+ |++|...++.+...|++|+++++++++.+.+.+.+ +.. .. .|-.+.+..... .+++|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 4678999999 99999999888889999999999988776665433 211 11 233333222111 357899
Q ss_pred EEEcCCC
Q 018158 252 ILDTVSA 258 (360)
Q Consensus 252 vid~~g~ 258 (360)
++.++|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9999874
No 244
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.75 E-value=0.035 Score=48.76 Aligned_cols=75 Identities=17% Similarity=0.178 Sum_probs=52.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe---EeeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE---FILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~-------~~~~~ 249 (360)
.++++||+|+ |.+|...++.+...|++|++++++.++.+.+...+ +... ..|..+.+.... ...++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999 99999999988888999999999988765554322 3221 123333332221 13479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.++|.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999998873
No 245
>PRK04148 hypothetical protein; Provisional
Probab=96.74 E-value=0.026 Score=44.14 Aligned_cols=87 Identities=24% Similarity=0.210 Sum_probs=62.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
++.+++++|.| .|...++.+...|.+|++++.+++..+.+++ .+.+.+.+.-- +.-...-+++|+++..-.......
T Consensus 16 ~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~-~~~~~v~dDlf-~p~~~~y~~a~liysirpp~el~~ 92 (134)
T PRK04148 16 KNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKK-LGLNAFVDDLF-NPNLEIYKNAKLIYSIRPPRDLQP 92 (134)
T ss_pred cCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH-hCCeEEECcCC-CCCHHHHhcCCEEEEeCCCHHHHH
Confidence 56889999999 8875566666789999999999999998888 66543332111 111123568999999888777666
Q ss_pred HHHHHhccCC
Q 018158 264 PILELLKVNG 273 (360)
Q Consensus 264 ~~~~~l~~~G 273 (360)
.+++..+.-+
T Consensus 93 ~~~~la~~~~ 102 (134)
T PRK04148 93 FILELAKKIN 102 (134)
T ss_pred HHHHHHHHcC
Confidence 7777766544
No 246
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.015 Score=51.48 Aligned_cols=75 Identities=20% Similarity=0.248 Sum_probs=53.3
Q ss_pred CCcEEEEEcC-C-hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH----cCCCeE----eeCccHHHHHhc-------C
Q 018158 184 AKKRIGIVGL-G-GLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL----LGADEF----ILSTNAMQMQAG-------K 246 (360)
Q Consensus 184 ~~~~vlI~Ga-g-~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~----~g~~~~----v~~~~~~~~~~~-------~ 246 (360)
.+++++|+|+ | ++|.++++.+...|++|++++++.++++...+. +|...+ .|..+.+..... .
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 95 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL 95 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 6899999998 6 799999999999999999999988776555432 343222 244443322211 3
Q ss_pred CCcCEEEEcCCC
Q 018158 247 RTLDFILDTVSA 258 (360)
Q Consensus 247 ~~~d~vid~~g~ 258 (360)
.++|++|++.|.
T Consensus 96 g~id~li~~ag~ 107 (262)
T PRK07831 96 GRLDVLVNNAGL 107 (262)
T ss_pred CCCCEEEECCCC
Confidence 578999999984
No 247
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.011 Score=52.39 Aligned_cols=75 Identities=17% Similarity=0.181 Sum_probs=53.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC-eE--eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD-EF--ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~~--v~~~~~~~~~~~-------~~~~ 249 (360)
+++++||+|+ |++|...++.+...|++|++++++.++.+.+.+.+ +.. .+ .|..+.+..... ..++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 99999999999889999999999987766554432 321 11 344444333211 3479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 89 d~vi~~Ag~ 97 (263)
T PRK07814 89 DIVVNNVGG 97 (263)
T ss_pred CEEEECCCC
Confidence 999999873
No 248
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.0067 Score=54.81 Aligned_cols=75 Identities=17% Similarity=0.219 Sum_probs=52.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe-E--eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE-F--ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~-~--v~~~~~~~~~~~-------~~~~ 249 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.+. . .|-.+.+..... ..++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999999 99999999988888999999999988776654432 3221 1 233333222111 3479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|+++++.|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999874
No 249
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.011 Score=52.47 Aligned_cols=75 Identities=13% Similarity=0.180 Sum_probs=53.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCCeE----eeCccHHHHHh-------cCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GADEF----ILSTNAMQMQA-------GKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~~~----v~~~~~~~~~~-------~~~ 247 (360)
.+++++|+|+ +++|..+++.+...|++|++++++.++.+.+.+.+ +...+ .|-.+.+.... ...
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 5789999999 99999999999999999999999988766544322 21111 24444433221 135
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++++++|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 69999999984
No 250
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=96.72 E-value=0.035 Score=48.86 Aligned_cols=96 Identities=16% Similarity=0.269 Sum_probs=63.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC-----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA----- 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~----- 258 (360)
++.+||-+|+|. |..+..+++ .|.+|++++.+++.++.++++......+..+ .....-....+|+|+....-
T Consensus 42 ~~~~vLDiGcG~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d-~~~~~~~~~~fD~V~s~~~l~~~~d 118 (251)
T PRK10258 42 KFTHVLDAGCGP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGD-IESLPLATATFDLAWSNLAVQWCGN 118 (251)
T ss_pred CCCeEEEeeCCC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcC-cccCcCCCCcEEEEEECchhhhcCC
Confidence 567899999965 665555554 5889999999999999888844332222211 11111124569999865431
Q ss_pred -cccHHHHHHHhccCCEEEEeCCCC
Q 018158 259 -KHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 259 -~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+.++.+.++++|.++......
T Consensus 119 ~~~~l~~~~~~Lk~gG~l~~~~~~~ 143 (251)
T PRK10258 119 LSTALRELYRVVRPGGVVAFTTLVQ 143 (251)
T ss_pred HHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 234788899999999998775433
No 251
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.01 Score=52.39 Aligned_cols=75 Identities=19% Similarity=0.169 Sum_probs=53.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC-----CC---eEeeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG-----AD---EFILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g-----~~---~~v~~~~~~~~~~~-------~~ 247 (360)
.+++++|+|+ |++|..+++.+...|++|+++++++++.+.+.+.+. .. ...|..+.+..... ..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5789999999 999999999998999999999998887766554332 11 11233333322221 35
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++|++.|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 79999999883
No 252
>PLN00203 glutamyl-tRNA reductase
Probab=96.69 E-value=0.017 Score=56.01 Aligned_cols=98 Identities=21% Similarity=0.302 Sum_probs=66.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~- 261 (360)
.+.+|+|+|+|.+|.+++..+...|+ +|+++.++.++.+.+.+.++...+ .....+.....-.+.|+||.|++....
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~~dl~~al~~aDVVIsAT~s~~pv 343 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPLDEMLACAAEADVVFTSTSSETPL 343 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecHhhHHHHHhcCCEEEEccCCCCCe
Confidence 37899999999999999999999998 699999999998888776642211 111112222334689999999876543
Q ss_pred -HHHHHHHhcc-----CC--EEEEeCCCC
Q 018158 262 -LGPILELLKV-----NG--TLSVVGAPE 282 (360)
Q Consensus 262 -~~~~~~~l~~-----~G--~~v~~g~~~ 282 (360)
....+..+.+ +. .+++++.+.
T Consensus 344 I~~e~l~~~~~~~~~~~~~~~~IDLAvPR 372 (519)
T PLN00203 344 FLKEHVEALPPASDTVGGKRLFVDISVPR 372 (519)
T ss_pred eCHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence 2344444422 12 467777654
No 253
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.69 E-value=0.04 Score=49.12 Aligned_cols=99 Identities=18% Similarity=0.141 Sum_probs=63.6
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCh---hHHHHHHHHcCCCeE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTSP---SKEKEAKELLGADEF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~~---~~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ +++|.++++.+...|++|+++.+++ ++.+.+.+++|.... .|-.+.+..... ..+
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 88 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGK 88 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 5789999997 4899999999888999999888764 344444443553222 233333222221 356
Q ss_pred cCEEEEcCCCc-----------------------------ccHHHHHHHhccCCEEEEeCCCC
Q 018158 249 LDFILDTVSAK-----------------------------HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~-----------------------------~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|+++++.|.. ...+.++..++.+|+++.++...
T Consensus 89 iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 151 (272)
T PRK08159 89 LDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYG 151 (272)
T ss_pred CcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence 99999998731 01233455566778998886543
No 254
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.68 E-value=0.011 Score=53.06 Aligned_cols=96 Identities=16% Similarity=0.112 Sum_probs=72.3
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHcCCCeEeeCcc
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIS-TSPSKEKEAKELLGADEFILSTN 238 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~-~~~~~~~~~~~~~g~~~~v~~~~ 238 (360)
..+||+..+.+..|+...--- .|++|+|+|- +.+|.-.+.++...|++|++.. ++.+ +
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~~--~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-l----------------- 195 (296)
T PRK14188 136 ALVPCTPLGCMMLLRRVHGDL--SGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-L----------------- 195 (296)
T ss_pred CCcCCCHHHHHHHHHHhCCCC--CCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-H-----------------
Confidence 456777777777777665322 7999999996 9999999999999999999995 4321 1
Q ss_pred HHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 239 AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 239 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+..+..|+|+-++|....+... ++++|..++++|...
T Consensus 196 ----~e~~~~ADIVIsavg~~~~v~~~--~lk~GavVIDvGin~ 233 (296)
T PRK14188 196 ----PAVCRRADILVAAVGRPEMVKGD--WIKPGATVIDVGINR 233 (296)
T ss_pred ----HHHHhcCCEEEEecCChhhcchh--eecCCCEEEEcCCcc
Confidence 12235689999999987655554 489999999998754
No 255
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.015 Score=51.92 Aligned_cols=75 Identities=19% Similarity=0.214 Sum_probs=54.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe---EeeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE---FILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|..+++.+...|++|+++++++++.+.+.+..+... ..|..+.+..... -.++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999999 999999999988899999999999988777666333211 1244443332221 2468999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
+++.|.
T Consensus 83 v~~ag~ 88 (277)
T PRK06180 83 VNNAGY 88 (277)
T ss_pred EECCCc
Confidence 999885
No 256
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.67 E-value=0.0076 Score=46.86 Aligned_cols=82 Identities=24% Similarity=0.377 Sum_probs=53.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIS-TSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~-~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
+.-+|-|+|+|-+|..+..+++..|.+|..+. ++.+..+++...++...+.+.. +.....|++|-++.+. .+
T Consensus 9 ~~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~------~~~~~aDlv~iavpDd-aI 81 (127)
T PF10727_consen 9 ARLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLE------EILRDADLVFIAVPDD-AI 81 (127)
T ss_dssp ---EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TT------GGGCC-SEEEE-S-CC-HH
T ss_pred CccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccc------cccccCCEEEEEechH-HH
Confidence 44578999999999999999999999988775 5555667776656654444332 2346799999999987 46
Q ss_pred HHHHHHhccC
Q 018158 263 GPILELLKVN 272 (360)
Q Consensus 263 ~~~~~~l~~~ 272 (360)
..+.+.|...
T Consensus 82 ~~va~~La~~ 91 (127)
T PF10727_consen 82 AEVAEQLAQY 91 (127)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHHHh
Confidence 8777877755
No 257
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.66 E-value=0.013 Score=53.56 Aligned_cols=74 Identities=24% Similarity=0.247 Sum_probs=53.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC---C-eE--eeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA---D-EF--ILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~---~-~~--v~~~~~~~~~~-------~~~~~ 249 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++.+.+.+.+.. . .. .|-.+.+.... ...++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 5788999999 9999999998888899999999998877666554421 1 11 24333332221 13469
Q ss_pred CEEEEcCC
Q 018158 250 DFILDTVS 257 (360)
Q Consensus 250 d~vid~~g 257 (360)
|++|+++|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999987
No 258
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.66 E-value=0.016 Score=51.48 Aligned_cols=97 Identities=13% Similarity=0.102 Sum_probs=73.1
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+..+.+..|+..+--- .|++++|+|. ..+|.-++.++...|++|++.......+.
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l--~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~----------------- 195 (285)
T PRK14191 135 GFVPATPMGVMRLLKHYHIEI--KGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLS----------------- 195 (285)
T ss_pred CCCCCcHHHHHHHHHHhCCCC--CCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHH-----------------
Confidence 456788777777777665322 6999999999 59999999999999999998864432221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+.-+.+|+++-++|....+. -+++++|..++++|...
T Consensus 196 ----~~~~~ADIvV~AvG~p~~i~--~~~vk~GavVIDvGi~~ 232 (285)
T PRK14191 196 ----FYTQNADIVCVGVGKPDLIK--ASMVKKGAVVVDIGINR 232 (285)
T ss_pred ----HHHHhCCEEEEecCCCCcCC--HHHcCCCcEEEEeeccc
Confidence 12356899999999876433 36789999999999743
No 259
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.011 Score=53.96 Aligned_cols=75 Identities=19% Similarity=0.222 Sum_probs=52.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----C-CC-e--EeeCccHHHHHh-------cCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----G-AD-E--FILSTNAMQMQA-------GKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g-~~-~--~v~~~~~~~~~~-------~~~ 247 (360)
.+++++|+|+ +++|.++++.+...|++|++++|+.++.+.+.+.+ + .. . ..|-.+.+..+. ...
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 5789999999 99999999888889999999999987765544322 2 11 1 124444433322 145
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++|+++|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 79999998873
No 260
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.65 E-value=0.027 Score=47.94 Aligned_cols=95 Identities=21% Similarity=0.181 Sum_probs=64.2
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHH---cCCC---eEeeCccHHHHHhcCCCcCEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKEL---LGAD---EFILSTNAMQMQAGKRTLDFIL 253 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~~~~~d~vi 253 (360)
+++++++|-+|+|. |..++.+++..+ .+|+.++.+++-.+.++++ .+.. .++..+-.+... ....+|.|+
T Consensus 70 ~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~-~~~~fD~Ii 147 (205)
T PRK13944 70 PRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLE-KHAPFDAII 147 (205)
T ss_pred CCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCc-cCCCccEEE
Confidence 44889999999864 777777777664 5899999998877666654 3422 222222111111 135799999
Q ss_pred EcCCCcccHHHHHHHhccCCEEEEe
Q 018158 254 DTVSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 254 d~~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
-+.......+.+.+.|++||+++..
T Consensus 148 ~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 148 VTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred EccCcchhhHHHHHhcCcCcEEEEE
Confidence 7766555557888999999999764
No 261
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.038 Score=48.18 Aligned_cols=72 Identities=14% Similarity=0.008 Sum_probs=48.7
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe--EeeCccHHHHHhc----CCCcCEEEEcCC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE--FILSTNAMQMQAG----KRTLDFILDTVS 257 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~--~v~~~~~~~~~~~----~~~~d~vid~~g 257 (360)
.+++|+|+ |++|...+..+...|++|+++++++++.+.+........ ..|-.+.+..... ....|.++.+.|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag 80 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG 80 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence 56899999 999998888888889999999999888777665222111 1344444333222 334677776665
No 262
>PRK07574 formate dehydrogenase; Provisional
Probab=96.65 E-value=0.026 Score=52.67 Aligned_cols=91 Identities=18% Similarity=0.211 Sum_probs=66.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS-- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~-- 261 (360)
.|++|.|+|.|.+|...++.++.+|++|++.+++....+..+. +|.... .+ ..+.-...|+|+.+......
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~-~g~~~~---~~---l~ell~~aDvV~l~lPlt~~T~ 263 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQE-LGLTYH---VS---FDSLVSVCDVVTIHCPLHPETE 263 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhh-cCceec---CC---HHHHhhcCCEEEEcCCCCHHHH
Confidence 5789999999999999999999999999999987643333334 553211 11 23345678999988874321
Q ss_pred --H-HHHHHHhccCCEEEEeCCC
Q 018158 262 --L-GPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 262 --~-~~~~~~l~~~G~~v~~g~~ 281 (360)
+ ...+..|+++..+++++.-
T Consensus 264 ~li~~~~l~~mk~ga~lIN~aRG 286 (385)
T PRK07574 264 HLFDADVLSRMKRGSYLVNTARG 286 (385)
T ss_pred HHhCHHHHhcCCCCcEEEECCCC
Confidence 1 4678889999999888753
No 263
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.012 Score=51.73 Aligned_cols=75 Identities=15% Similarity=0.124 Sum_probs=53.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe---EeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE---FILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.+. ..|..+.+..... ..++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999 99999999999999999999999988776665433 3221 1244443332221 3579
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|+++++.|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999998873
No 264
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.64 E-value=0.047 Score=48.06 Aligned_cols=75 Identities=16% Similarity=0.211 Sum_probs=52.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |.+|..+++.+...|++|+++++++++.+.+.+. .+.... .|..+.+..... ..++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 9999999999999999999999998766554432 343322 233333322211 2468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999999874
No 265
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.63 E-value=0.014 Score=51.27 Aligned_cols=75 Identities=20% Similarity=0.250 Sum_probs=52.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |.+|..+++.+...|++|+++++++++.+.+.+.+ |.... .|..+.+..... ..++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999 99999999988888999999999987665544433 32111 244443332221 3568
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999974
No 266
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.62 E-value=0.023 Score=48.79 Aligned_cols=95 Identities=22% Similarity=0.264 Sum_probs=63.7
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHH---cCCCeE--eeCccHHHHHhcCCCcCEEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKEL---LGADEF--ILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~---~g~~~~--v~~~~~~~~~~~~~~~d~vid 254 (360)
++++++||-+|+|. |..++.+++..+. +|+.++.+++..+.++++ +|.+.+ +.. +..........||+|+-
T Consensus 75 ~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~-d~~~~~~~~~~fD~Ii~ 152 (215)
T TIGR00080 75 LKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG-DGTQGWEPLAPYDRIYV 152 (215)
T ss_pred CCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC-CcccCCcccCCCCEEEE
Confidence 44899999998863 6677778887654 699999999877776654 343222 211 11111111357999986
Q ss_pred cCCCcccHHHHHHHhccCCEEEEe
Q 018158 255 TVSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 255 ~~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
..........+.+.|+++|+++..
T Consensus 153 ~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 153 TAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred cCCcccccHHHHHhcCcCcEEEEE
Confidence 555555567888999999998764
No 267
>PRK06398 aldose dehydrogenase; Validated
Probab=96.62 E-value=0.013 Score=51.76 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=48.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhc-------CCCcCEEEEc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG-------KRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~-------~~~~d~vid~ 255 (360)
.++++||+|+ |++|.+++..+...|++|++++++.++... +- ....|-.+.+..... ..++|++|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~----~~-~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~ 79 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYND----VD-YFKVDVSNKEQVIKGIDYVISKYGRIDILVNN 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCc----eE-EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 5789999999 999999999999999999999987653221 10 011233333222221 3469999998
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
.|.
T Consensus 80 Ag~ 82 (258)
T PRK06398 80 AGI 82 (258)
T ss_pred CCC
Confidence 873
No 268
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.014 Score=51.42 Aligned_cols=75 Identities=20% Similarity=0.267 Sum_probs=53.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC-eE--eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD-EF--ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~~--v~~~~~~~~~~~-------~~~~ 249 (360)
.+++++|+|+ |.+|..++..+...|++|++++++.++++.+.+.+ +.. .+ .|..+.+..... ..++
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTI 87 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 5799999999 99999999999989999999999988876655432 211 12 233333222221 3478
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 88 d~li~~ag~ 96 (258)
T PRK06949 88 DILVNNSGV 96 (258)
T ss_pred CEEEECCCC
Confidence 999999983
No 269
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.61 E-value=0.019 Score=50.29 Aligned_cols=75 Identities=23% Similarity=0.245 Sum_probs=52.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe---EeeCccHHHHHh----c---CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE---FILSTNAMQMQA----G---KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~----~---~~~~ 249 (360)
++++++|+|+ |++|..+++.+...|++|++++++.++.+.+... .+... ..|-.+.+.... . ..++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 9999999999998999999999988766554332 24321 223333322211 1 2568
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 84 d~vi~~ag~ 92 (253)
T PRK08217 84 NGLINNAGI 92 (253)
T ss_pred CEEEECCCc
Confidence 999999873
No 270
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=96.61 E-value=0.015 Score=53.26 Aligned_cols=94 Identities=16% Similarity=0.196 Sum_probs=65.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHH-HcCC-eEEEEeCChhHHHHHHHHc----CCCeEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGK-AFGH-HVTVISTSPSKEKEAKELL----GADEFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~-~~G~-~V~~~~~~~~~~~~~~~~~----g~~~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
..++++|+|+|..+.+.+..+. ..+. +|++..|+.++.+.+.+++ |.+ +....+ ..+.-.+.|+|+.|++
T Consensus 128 ~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~~---~~~av~~aDiVvtaT~ 203 (326)
T TIGR02992 128 DSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAATD---PRAAMSGADIIVTTTP 203 (326)
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeCC---HHHHhccCCEEEEecC
Confidence 5678999999999988777776 4676 6999999999877766544 322 222222 2233468999999998
Q ss_pred CcccHHHHHHHhccCCEEEEeCCCC
Q 018158 258 AKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 258 ~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+- -.++++++-++..+|...
T Consensus 204 s~~p~i-~~~~l~~g~~i~~vg~~~ 227 (326)
T TIGR02992 204 SETPIL-HAEWLEPGQHVTAMGSDA 227 (326)
T ss_pred CCCcEe-cHHHcCCCcEEEeeCCCC
Confidence 754321 125788888888888653
No 271
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.60 E-value=0.046 Score=48.19 Aligned_cols=75 Identities=21% Similarity=0.225 Sum_probs=49.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH--HcCCCe---EeeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKE--LLGADE---FILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~--~~g~~~---~v~~~~~~~~~~~-------~~~~d 250 (360)
.++++||+|+ |++|.++++.+...|++|+++++++...+...+ ..+.+. ..|..+.+..... ..++|
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence 5789999999 999999999998899999999987543222222 024321 1344443222111 35799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++++++|.
T Consensus 87 ~lv~nAg~ 94 (260)
T PRK12823 87 VLINNVGG 94 (260)
T ss_pred EEEECCcc
Confidence 99999873
No 272
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.60 E-value=0.022 Score=41.80 Aligned_cols=86 Identities=26% Similarity=0.358 Sum_probs=58.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcC---CeEEEE-eCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFG---HHVTVI-STSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G---~~V~~~-~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
++.|+|+|.+|.+.+.-+...| .+|+++ .+++++.+.++++++...... +..+ .-+..|++|-|+.... +
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~-~~~~----~~~~advvilav~p~~-~ 74 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD-DNEE----AAQEADVVILAVKPQQ-L 74 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE-EHHH----HHHHTSEEEE-S-GGG-H
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC-ChHH----hhccCCEEEEEECHHH-H
Confidence 4678899999999999999999 788855 999999999888787543321 1111 2236899999997653 3
Q ss_pred HHHHHH---hccCCEEEEe
Q 018158 263 GPILEL---LKVNGTLSVV 278 (360)
Q Consensus 263 ~~~~~~---l~~~G~~v~~ 278 (360)
..+++. ..++..++++
T Consensus 75 ~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 75 PEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp HHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhhccCCCEEEEe
Confidence 444443 4456666665
No 273
>PRK08017 oxidoreductase; Provisional
Probab=96.59 E-value=0.015 Score=51.02 Aligned_cols=72 Identities=18% Similarity=0.171 Sum_probs=53.5
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHH----hc----CCCcCEEEEc
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQ----AG----KRTLDFILDT 255 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~----~~----~~~~d~vid~ 255 (360)
++++|+|+ |++|..+++.+...|++|++++++.++.+.+++ .+.+.+ .|..+.+... .. ...+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-LGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999999 999999999999999999999999988887776 675433 2333332221 11 3568999988
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 774
No 274
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.015 Score=51.23 Aligned_cols=74 Identities=20% Similarity=0.206 Sum_probs=52.5
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC---eEeeCccHHHHHhc-CCCcCEEEEcC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD---EFILSTNAMQMQAG-KRTLDFILDTV 256 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~-~~~~d~vid~~ 256 (360)
++++||+|+ |.+|..+++.+...|++|++++++.++...+.+. .+.. ...|..+....... ..++|++|++.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 467999999 9999999999999999999999987765554432 2322 11244444343333 45899999998
Q ss_pred CC
Q 018158 257 SA 258 (360)
Q Consensus 257 g~ 258 (360)
|.
T Consensus 82 g~ 83 (257)
T PRK09291 82 GI 83 (257)
T ss_pred Cc
Confidence 73
No 275
>PRK06194 hypothetical protein; Provisional
Probab=96.58 E-value=0.017 Score=51.74 Aligned_cols=75 Identities=21% Similarity=0.300 Sum_probs=52.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++++.+.+.+ +.... .|..+.+..... ..++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999999 99999999988889999999999877665554333 32211 233333333221 3468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999985
No 276
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.57 E-value=0.016 Score=47.39 Aligned_cols=91 Identities=26% Similarity=0.353 Sum_probs=62.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC--CCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG--ADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g--~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
+|.|+|+ |-+|...++=|+.+|.+|++++|++++....+. .- -..+++ .+.....-.++|+||++.|...
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~-~~i~q~Difd---~~~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQG-VTILQKDIFD---LTSLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccccc-ceeecccccC---hhhhHhhhcCCceEEEeccCCCCCh
Confidence 4778899 999999999999999999999999987654322 11 012222 2222334679999999998551
Q ss_pred ------cHHHHHHHhccCC--EEEEeCCC
Q 018158 261 ------SLGPILELLKVNG--TLSVVGAP 281 (360)
Q Consensus 261 ------~~~~~~~~l~~~G--~~v~~g~~ 281 (360)
..+.++..++..| |+..+|.-
T Consensus 78 ~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 78 DELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 1234667777643 77777753
No 277
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.56 E-value=0.025 Score=52.85 Aligned_cols=95 Identities=19% Similarity=0.332 Sum_probs=69.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~- 261 (360)
.++++||+|+|-+|..++..+...|. +|++..|+.++...+.+++|+..+ ...+ ....-..+|+||.+++.+..
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~e---l~~~l~~~DvVissTsa~~~i 252 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALEE---LLEALAEADVVISSTSAPHPI 252 (414)
T ss_pred ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHHH---HHHhhhhCCEEEEecCCCccc
Confidence 68899999999999999999999997 699999999998888887995433 2222 22334679999999987643
Q ss_pred --HHHHHHHhccCC--EEEEeCCCC
Q 018158 262 --LGPILELLKVNG--TLSVVGAPE 282 (360)
Q Consensus 262 --~~~~~~~l~~~G--~~v~~g~~~ 282 (360)
.....+.++.-- -+++++.+.
T Consensus 253 i~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 253 ITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred cCHHHHHHHHhcccCeEEEEecCCC
Confidence 234445554332 356777654
No 278
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.56 E-value=0.054 Score=47.83 Aligned_cols=99 Identities=9% Similarity=0.063 Sum_probs=63.2
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCh---hHHHHHHHHcC-CC---eEeeCccHHHHHhc-------C
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTSP---SKEKEAKELLG-AD---EFILSTNAMQMQAG-------K 246 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~~---~~~~~~~~~~g-~~---~~v~~~~~~~~~~~-------~ 246 (360)
.+++++|+|+ +++|.++++.+...|++|++++++. ++++.+.+.+. .. ...|-.+.+..... -
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 5789999997 4999999888888999999987643 44454544342 21 11244443322211 3
Q ss_pred CCcCEEEEcCCCcc-----------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 247 RTLDFILDTVSAKH-----------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 247 ~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.++|+++++.|... ..+.++..|+++|+++.++...
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~ 150 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLG 150 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccC
Confidence 57999999886310 0123455566779999887654
No 279
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.56 E-value=0.056 Score=46.91 Aligned_cols=75 Identities=15% Similarity=0.168 Sum_probs=51.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
+++++||+|+ |.+|..+++.+...|.+|+++++++++.+.+... .+.... .|..+....... ...+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999999 9999999998888899999999998775544332 232222 233333222111 2468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|.++.+.|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999999874
No 280
>PRK05717 oxidoreductase; Validated
Probab=96.55 E-value=0.021 Score=50.24 Aligned_cols=75 Identities=15% Similarity=0.159 Sum_probs=52.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe---EeeCccHHHHH----hc---CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE---FILSTNAMQMQ----AG---KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~----~~---~~~~d~v 252 (360)
.|++++|+|+ |.+|..++..+...|++|++++++.++...+.+.++... ..|-.+.+... .. -.++|++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 88 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL 88 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5789999999 999999999888899999999988776665544355321 12333332221 11 2468999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|.+.|.
T Consensus 89 i~~ag~ 94 (255)
T PRK05717 89 VCNAAI 94 (255)
T ss_pred EECCCc
Confidence 998874
No 281
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.54 E-value=0.034 Score=48.87 Aligned_cols=74 Identities=14% Similarity=0.127 Sum_probs=50.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH--HHHHHHHcCCCe---EeeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK--EKEAKELLGADE---FILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~--~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~d 250 (360)
.++++||+|+ +++|.++++.+...|++|++++++... .+.+++ .+.+. ..|-.+.+..... ..++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEA-LGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHH-cCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999 999999999999999999998876432 122233 45321 1344444333221 35799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
+++++.|.
T Consensus 86 ~lv~~ag~ 93 (251)
T PRK12481 86 ILINNAGI 93 (251)
T ss_pred EEEECCCc
Confidence 99999873
No 282
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.015 Score=51.05 Aligned_cols=75 Identities=19% Similarity=0.156 Sum_probs=53.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.+++++|+|+ |++|..++..+...|++|+++++++++.+.+.+++ +.+.. .|-.+.+..... ..++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4689999999 99999999988889999999999988776655433 32221 233333222211 3479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999999874
No 283
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.54 E-value=0.017 Score=51.33 Aligned_cols=97 Identities=15% Similarity=0.144 Sum_probs=74.1
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+....+..++..+--- .|++++|+|. ..+|.-++.++...|++|++.......+
T Consensus 142 ~~~PcTp~av~~ll~~~~i~l--~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l------------------ 201 (287)
T PRK14176 142 GLVPCTPHGVIRALEEYGVDI--EGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDL------------------ 201 (287)
T ss_pred CCCCCcHHHHHHHHHHcCCCC--CCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCH------------------
Confidence 456787777777787765322 7999999999 6699999999999999999988543221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+.+|+++.++|.+..+. -++++++..++++|...
T Consensus 202 ---~~~~~~ADIvv~AvG~p~~i~--~~~vk~gavVIDvGin~ 239 (287)
T PRK14176 202 ---KKYTLDADILVVATGVKHLIK--ADMVKEGAVIFDVGITK 239 (287)
T ss_pred ---HHHHhhCCEEEEccCCccccC--HHHcCCCcEEEEecccc
Confidence 112357899999999876542 36899999999999753
No 284
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.02 Score=50.37 Aligned_cols=74 Identities=18% Similarity=0.262 Sum_probs=51.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe----EeeCccHHHHHhc-------CCCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE----FILSTNAMQMQAG-------KRTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~----~v~~~~~~~~~~~-------~~~~d~ 251 (360)
.++++||+|+ |.+|..+++.+...|++|++++++.+......+ ..... ..|-.+.+..... ..++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQ-LLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 5789999999 999999998888899999999998775544444 32211 1233333222211 347899
Q ss_pred EEEcCCC
Q 018158 252 ILDTVSA 258 (360)
Q Consensus 252 vid~~g~ 258 (360)
+|.+.|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999974
No 285
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.04 Score=49.23 Aligned_cols=96 Identities=17% Similarity=0.216 Sum_probs=61.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe-E--eeCccHHHHHhc------CCCcCEE
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE-F--ILSTNAMQMQAG------KRTLDFI 252 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~-~--v~~~~~~~~~~~------~~~~d~v 252 (360)
+++++|.|+|++|..++..+. .|++|++++++.++++.+.+.+ |.+. . .|-.+.+..... ..++|++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l 80 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL 80 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence 367889999999999888875 7999999999887665554323 3221 1 244343222111 2569999
Q ss_pred EEcCCCcc------------------cHHHHHHHhccCCEEEEeCCC
Q 018158 253 LDTVSAKH------------------SLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 253 id~~g~~~------------------~~~~~~~~l~~~G~~v~~g~~ 281 (360)
|++.|... .++.+...++.+|+++.++..
T Consensus 81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~ 127 (275)
T PRK06940 81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ 127 (275)
T ss_pred EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence 99998431 123444556666777776544
No 286
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.51 E-value=0.025 Score=48.89 Aligned_cols=101 Identities=14% Similarity=0.167 Sum_probs=63.0
Q ss_pred hchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe---EEEEeCC----hhHH--------HHHHHHcCCCeEee
Q 018158 171 FCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH---VTVISTS----PSKE--------KEAKELLGADEFIL 235 (360)
Q Consensus 171 ~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~---V~~~~~~----~~~~--------~~~~~~~g~~~~v~ 235 (360)
+.+++..+.-- .+.+++|+|+|+.|..++..+...|++ +++++++ .++. ..++. ++... .+
T Consensus 13 ~~al~~~g~~l--~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~-~~~~~-~~ 88 (226)
T cd05311 13 LNALKLVGKKI--EEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKE-TNPEK-TG 88 (226)
T ss_pred HHHHHHhCCCc--cCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHH-hccCc-cc
Confidence 34454443222 578999999999999999988888984 9999988 3432 22333 43221 11
Q ss_pred CccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeC
Q 018158 236 STNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 236 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 279 (360)
.+ ..+.-+++|++|++++....-...++.|.+...+..+.
T Consensus 89 -~~---l~~~l~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 89 -GT---LKEALKGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred -CC---HHHHHhcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 11 11222459999999974322246777787776555443
No 287
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.51 E-value=0.076 Score=45.21 Aligned_cols=118 Identities=15% Similarity=0.048 Sum_probs=76.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP-SKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~-~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
.|+.|||+|+|.+|.-=+.++...|++|+++..+. +++..+....+.+ .+. ... ....-.++++||-++++...-
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~-~~~-~~~--~~~~~~~~~lviaAt~d~~ln 86 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIK-WIE-REF--DAEDLDDAFLVIAATDDEELN 86 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcc-hhh-ccc--ChhhhcCceEEEEeCCCHHHH
Confidence 68899999999999999999999999999999776 4455554422211 111 111 111123499999999988766
Q ss_pred HHHHHHhccCCEEEEeCCCCCCcccChhh-HhccCcEEEEeecC
Q 018158 263 GPILELLKVNGTLSVVGAPEAPFELPSFP-LIFGKRSVKGSMTG 305 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~ 305 (360)
..+....++.+.++.+.......++-... +-...+.+.-+..+
T Consensus 87 ~~i~~~a~~~~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIsT~G 130 (210)
T COG1648 87 ERIAKAARERRILVNVVDDPELCDFIFPAIVDRGPLQIAISTGG 130 (210)
T ss_pred HHHHHHHHHhCCceeccCCcccCceecceeeccCCeEEEEECCC
Confidence 78888888888888886554332322222 23334555444444
No 288
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.016 Score=50.94 Aligned_cols=74 Identities=20% Similarity=0.197 Sum_probs=51.8
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC-eEe--eCccHHHHHhc-------CCCcC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD-EFI--LSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~~v--~~~~~~~~~~~-------~~~~d 250 (360)
+++++|+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.. ..+ |-.+.+..... ..++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 478999999 99999999999999999999999987766654433 221 122 33333222221 35789
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|++.|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999873
No 289
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.015 Score=50.20 Aligned_cols=72 Identities=17% Similarity=0.195 Sum_probs=50.7
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe--EeeCccHHHHHhc-----CCCcCEEEEcCC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE--FILSTNAMQMQAG-----KRTLDFILDTVS 257 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~--~v~~~~~~~~~~~-----~~~~d~vid~~g 257 (360)
++++|+|+ |++|...+..+...|++|+++++++++.+.+.+ ++... ..|-.+.+..... ..++|++|.+.|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 46899999 999999888888889999999999877666655 43221 2333333322221 347999999886
Q ss_pred C
Q 018158 258 A 258 (360)
Q Consensus 258 ~ 258 (360)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 4
No 290
>PRK06128 oxidoreductase; Provisional
Probab=96.49 E-value=0.035 Score=50.28 Aligned_cols=99 Identities=11% Similarity=0.102 Sum_probs=62.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh--HHHHHHH---HcCCCeE---eeCccHHHHHh-------cCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS--KEKEAKE---LLGADEF---ILSTNAMQMQA-------GKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~--~~~~~~~---~~g~~~~---v~~~~~~~~~~-------~~~ 247 (360)
.++++||+|+ |++|..++..+...|++|+++.++.+ +.+.+.+ ..|.... .|-.+.+.... ...
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 5789999999 99999999988889999988876532 2222211 1443222 23333322221 135
Q ss_pred CcCEEEEcCCCcc--------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 248 TLDFILDTVSAKH--------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 248 ~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
++|++|++.|... ..+.++..|+.+|+++.++...
T Consensus 134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~ 194 (300)
T PRK06128 134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ 194 (300)
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcc
Confidence 7999999987320 1234445566778999887644
No 291
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.49 E-value=0.02 Score=53.96 Aligned_cols=75 Identities=13% Similarity=0.124 Sum_probs=52.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC--CC-eEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG--AD-EFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g--~~-~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
.+++++|+|+ |++|.+.++.+...|++|+++++++++........+ .. ...|..+.+...+.-+++|++|++.|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi 255 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI 255 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence 5789999999 999999999888899999999988776543322111 11 113444554444445689999998874
No 292
>PRK09242 tropinone reductase; Provisional
Probab=96.48 E-value=0.019 Score=50.58 Aligned_cols=75 Identities=12% Similarity=0.158 Sum_probs=53.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc-----CCCe---EeeCccHHHH-------HhcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL-----GADE---FILSTNAMQM-------QAGKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~-----g~~~---~v~~~~~~~~-------~~~~~ 247 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++.+.+.+++ +.+. ..|..+.+.. ...-.
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999 99999999999999999999999988766655433 2211 1233333222 11135
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 79999999984
No 293
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.48 E-value=0.03 Score=51.53 Aligned_cols=89 Identities=28% Similarity=0.379 Sum_probs=65.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.|+++.|+|.|.+|...++.++..|++|++.+++.... .... +|.. ..+ ..+.-...|+|+.++....
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~-~~~~----~~~---l~ell~~aDiV~l~lP~t~~T~ 219 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE-AEKE-LGAE----YRP---LEELLRESDFVSLHVPLTKETY 219 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh-hHHH-cCCE----ecC---HHHHHhhCCEEEEeCCCChHHh
Confidence 68999999999999999999999999999999876432 2223 4432 111 2233457899999887432
Q ss_pred --cHHHHHHHhccCCEEEEeCCC
Q 018158 261 --SLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 261 --~~~~~~~~l~~~G~~v~~g~~ 281 (360)
.-...+..|+++..+++++.-
T Consensus 220 ~~i~~~~~~~mk~ga~lIN~aRg 242 (333)
T PRK13243 220 HMINEERLKLMKPTAILVNTARG 242 (333)
T ss_pred hccCHHHHhcCCCCeEEEECcCc
Confidence 125778899999999888653
No 294
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.027 Score=49.65 Aligned_cols=74 Identities=12% Similarity=0.140 Sum_probs=51.8
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eE----eeCccHHHHHhc-------CCCcCE
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EF----ILSTNAMQMQAG-------KRTLDF 251 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~----v~~~~~~~~~~~-------~~~~d~ 251 (360)
+++++|+|+ |++|..+++.+...|++|++++++.++.+.+.+.+... .+ .|-.+.+..... ...+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 468999999 99999999888888999999999988877665534321 11 233333222111 245899
Q ss_pred EEEcCCC
Q 018158 252 ILDTVSA 258 (360)
Q Consensus 252 vid~~g~ 258 (360)
++++.|.
T Consensus 82 lv~~ag~ 88 (257)
T PRK07024 82 VIANAGI 88 (257)
T ss_pred EEECCCc
Confidence 9998873
No 295
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.017 Score=51.55 Aligned_cols=75 Identities=15% Similarity=0.100 Sum_probs=52.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe---EeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE---FILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|.+++..+...|++|++++++.++++.+.+.+ |... ..|-.+.+..... ..++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 99999999998889999999999887766554323 3221 1233333332221 3468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 85 d~li~nAg~ 93 (275)
T PRK05876 85 DVVFSNAGI 93 (275)
T ss_pred CEEEECCCc
Confidence 999999873
No 296
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.017 Score=50.88 Aligned_cols=75 Identities=16% Similarity=0.153 Sum_probs=53.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC---eEeeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD---EFILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~-------~~~~~ 249 (360)
.+++++|+|+ |++|..+++.+...|++|+++++++++.+.+.+.+ +.. ...|..+.+.... .-.++
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 6789999999 99999999988899999999999887766655433 221 1223333322211 12468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.+.|.
T Consensus 84 d~vi~~ag~ 92 (258)
T PRK07890 84 DALVNNAFR 92 (258)
T ss_pred cEEEECCcc
Confidence 999998874
No 297
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.44 E-value=0.023 Score=50.26 Aligned_cols=96 Identities=18% Similarity=0.207 Sum_probs=72.9
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+....+..++..+--- .|++++|+|- ..+|.-++.++...|++|++..+....+..
T Consensus 130 ~~~PcTp~av~~ll~~~~i~l--~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~---------------- 191 (279)
T PRK14178 130 GFAPCTPNGIMTLLHEYKISI--AGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKA---------------- 191 (279)
T ss_pred CCCCCCHHHHHHHHHHcCCCC--CCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHH----------------
Confidence 356777777777777765333 7999999999 699999999999999999998866532221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
.-+.+|+++.++|....+.. +++++|..++++|..
T Consensus 192 -----~~~~ADIvI~Avgk~~lv~~--~~vk~GavVIDVgi~ 226 (279)
T PRK14178 192 -----ELRQADILVSAAGKAGFITP--DMVKPGATVIDVGIN 226 (279)
T ss_pred -----HHhhCCEEEECCCcccccCH--HHcCCCcEEEEeecc
Confidence 23468999999986644332 457999999999875
No 298
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=96.43 E-value=0.061 Score=47.50 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=61.9
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCh------hHHHHHHHHcCCCeE--eeCccHHHHHhc-------
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTSP------SKEKEAKELLGADEF--ILSTNAMQMQAG------- 245 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~~------~~~~~~~~~~g~~~~--v~~~~~~~~~~~------- 245 (360)
.+++++|+|+ +++|.++++.+...|++|+++.++. +..+.+.+..+.... .|-.+.+.....
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 5789999996 4899999988888999998876432 223333331221111 244443333211
Q ss_pred CCCcCEEEEcCCCcc-----------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 246 KRTLDFILDTVSAKH-----------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 246 ~~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
..++|+++++.|... ..+.++..|+++|+++.++...
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~ 150 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG 150 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 357999999987320 1244566677789998887643
No 299
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.023 Score=48.98 Aligned_cols=71 Identities=20% Similarity=0.224 Sum_probs=51.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHh----cCCCcCEEEEcCC
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQA----GKRTLDFILDTVS 257 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~----~~~~~d~vid~~g 257 (360)
+++|+|+ |++|..+++.+...|++|++++++.++.+.+.+.++...+ .|..+.+.... ...++|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 4899999 9999999999988999999999998887766554554322 34444433322 2346899999865
No 300
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.43 E-value=0.081 Score=46.89 Aligned_cols=74 Identities=15% Similarity=0.149 Sum_probs=47.8
Q ss_pred CCcEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCChh---HHHHHHHHcCCCeE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-G--GLGHVAVKFGKAFGHHVTVISTSPS---KEKEAKELLGADEF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g--~vG~~aiqla~~~G~~V~~~~~~~~---~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ + ++|.++++.+-..|++|+++++++. ..+.+....+.... .|-.+.+..... ..+
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 5789999998 4 7999988888889999998887632 22333321232111 244443333221 346
Q ss_pred cCEEEEcCC
Q 018158 249 LDFILDTVS 257 (360)
Q Consensus 249 ~d~vid~~g 257 (360)
+|++|++.|
T Consensus 85 iD~linnAg 93 (262)
T PRK07984 85 FDGFVHSIG 93 (262)
T ss_pred CCEEEECCc
Confidence 899999997
No 301
>PLN03139 formate dehydrogenase; Provisional
Probab=96.43 E-value=0.024 Score=52.98 Aligned_cols=91 Identities=16% Similarity=0.139 Sum_probs=65.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS-- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~-- 261 (360)
.|++|.|+|.|.+|...++.++.+|++|++.+++....+...+ .|...+ .+ ..+.-...|+|+.+......
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~-~g~~~~---~~---l~ell~~sDvV~l~lPlt~~T~ 270 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKE-TGAKFE---ED---LDAMLPKCDVVVINTPLTEKTR 270 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhh-cCceec---CC---HHHHHhhCCEEEEeCCCCHHHH
Confidence 6889999999999999999999999999999887544344344 554321 11 22334568999988874211
Q ss_pred ---HHHHHHHhccCCEEEEeCCC
Q 018158 262 ---LGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 262 ---~~~~~~~l~~~G~~v~~g~~ 281 (360)
-...+..|+++..+++++.-
T Consensus 271 ~li~~~~l~~mk~ga~lIN~aRG 293 (386)
T PLN03139 271 GMFNKERIAKMKKGVLIVNNARG 293 (386)
T ss_pred HHhCHHHHhhCCCCeEEEECCCC
Confidence 24678899999999888753
No 302
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.02 Score=49.61 Aligned_cols=75 Identities=20% Similarity=0.176 Sum_probs=50.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE-eeCccHHHHHh-------cCCCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF-ILSTNAMQMQA-------GKRTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~-v~~~~~~~~~~-------~~~~~d~ 251 (360)
+++++||+|+ |.+|..+++.+...|++|++++++.++.....+. .+...+ .|..+.+.... ...++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 5789999999 9999999998888899999999977654332221 232211 23333322211 1347999
Q ss_pred EEEcCCC
Q 018158 252 ILDTVSA 258 (360)
Q Consensus 252 vid~~g~ 258 (360)
++.+.|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9998874
No 303
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.029 Score=48.59 Aligned_cols=74 Identities=15% Similarity=0.149 Sum_probs=52.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc--------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG--------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~--------~~~ 248 (360)
.+++++|+|+ +++|.+.+..+...|++|+++.++.++++.+.+. .+.+.. .|-.+.+..... +.+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999 9999998888888999999999998877655432 343211 233333333211 337
Q ss_pred cCEEEEcCC
Q 018158 249 LDFILDTVS 257 (360)
Q Consensus 249 ~d~vid~~g 257 (360)
+|++|++.|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999986
No 304
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.40 E-value=0.028 Score=48.10 Aligned_cols=91 Identities=25% Similarity=0.274 Sum_probs=61.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeEeeCccH--HHHHhcCCCcCEEEEc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEFILSTNA--MQMQAGKRTLDFILDT--- 255 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~v~~~~~--~~~~~~~~~~d~vid~--- 255 (360)
+|.+||=+|+|+ |+++.-+|+ +|++|++++.+++..+.++.+ -|.. ++|... +.....+..||+|+.-
T Consensus 59 ~g~~vLDvGCGg-G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~~~FDvV~cmEVl 134 (243)
T COG2227 59 PGLRVLDVGCGG-GILSEPLAR-LGASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASAGGQFDVVTCMEVL 134 (243)
T ss_pred CCCeEEEecCCc-cHhhHHHHH-CCCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcCCCccEEEEhhHH
Confidence 789999999943 555555554 589999999999988888753 2222 445444 2223335789999852
Q ss_pred --CCCcc-cHHHHHHHhccCCEEEEe
Q 018158 256 --VSAKH-SLGPILELLKVNGTLSVV 278 (360)
Q Consensus 256 --~g~~~-~~~~~~~~l~~~G~~v~~ 278 (360)
+..+. .+..+..+++|+|.+...
T Consensus 135 EHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 135 EHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred HccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 22322 356788999999988665
No 305
>PLN02253 xanthoxin dehydrogenase
Probab=96.40 E-value=0.028 Score=50.21 Aligned_cols=75 Identities=17% Similarity=0.205 Sum_probs=52.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC--C-e--EeeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA--D-E--FILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~--~-~--~v~~~~~~~~~~~-------~~~~d 250 (360)
.++++||+|+ |++|.++++.+...|++|++++++.+..+.+.+.++. . . ..|-.+.+..... ..++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 4789999999 9999999988888899999999887766555443432 1 1 1244444333221 34799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|++.|.
T Consensus 97 ~li~~Ag~ 104 (280)
T PLN02253 97 IMVNNAGL 104 (280)
T ss_pred EEEECCCc
Confidence 99999874
No 306
>PRK06141 ornithine cyclodeaminase; Validated
Probab=96.39 E-value=0.023 Score=51.81 Aligned_cols=95 Identities=24% Similarity=0.221 Sum_probs=64.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHH-cCC-eEEEEeCChhHHHHHHHHcCCC--eEeeCccHHHHHhcCCCcCEEEEcCCCc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKA-FGH-HVTVISTSPSKEKEAKELLGAD--EFILSTNAMQMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~-~G~-~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~~~~~d~vid~~g~~ 259 (360)
..++++|+|+|.+|...+..+.. .+. +|++..|+.++.+.+.+.+... .+....+. .+.-.+.|+|+.+++..
T Consensus 124 ~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~---~~av~~aDIVi~aT~s~ 200 (314)
T PRK06141 124 DASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDL---EAAVRQADIISCATLST 200 (314)
T ss_pred CCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCH---HHHHhcCCEEEEeeCCC
Confidence 56889999999999988764443 564 7999999999887777655321 12211222 22346899999988865
Q ss_pred ccHHHHHHHhccCCEEEEeCCCC
Q 018158 260 HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 260 ~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
..+-. -+.++++-.+..+|...
T Consensus 201 ~pvl~-~~~l~~g~~i~~ig~~~ 222 (314)
T PRK06141 201 EPLVR-GEWLKPGTHLDLVGNFT 222 (314)
T ss_pred CCEec-HHHcCCCCEEEeeCCCC
Confidence 43211 26788888777777654
No 307
>PRK08643 acetoin reductase; Validated
Probab=96.37 E-value=0.023 Score=50.01 Aligned_cols=74 Identities=18% Similarity=0.223 Sum_probs=51.7
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHh-------cCCCcC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQA-------GKRTLD 250 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~-------~~~~~d 250 (360)
++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.... .|..+.+.... ...++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999 99999999999999999999999887765554433 22211 23333332211 135799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|.+.|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999874
No 308
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.37 E-value=0.026 Score=51.17 Aligned_cols=101 Identities=14% Similarity=0.078 Sum_probs=70.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHH-cCC-eEEEEeCChhHHHHHHHHcCCC--eEeeCccHHHHHhcCCCcCEEEEcCCCc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKA-FGH-HVTVISTSPSKEKEAKELLGAD--EFILSTNAMQMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~-~G~-~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~~~~~d~vid~~g~~ 259 (360)
..++++|+|+|..|.+.++.+.. .+. +|.+..++.++.+.+.+++... .+. ..+ ..+.-.++|+|+.|++..
T Consensus 124 ~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~~~---~~~av~~aDiVitaT~s~ 199 (304)
T PRK07340 124 PPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-PLD---GEAIPEAVDLVVTATTSR 199 (304)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-ECC---HHHHhhcCCEEEEccCCC
Confidence 56789999999999998888764 566 6999999999887777766421 111 112 222346899999999876
Q ss_pred ccHHHHHHHhccCCEEEEeCCCCC-CcccChh
Q 018158 260 HSLGPILELLKVNGTLSVVGAPEA-PFELPSF 290 (360)
Q Consensus 260 ~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~ 290 (360)
..+-.. .+++|-++..+|.... ...++..
T Consensus 200 ~Pl~~~--~~~~g~hi~~iGs~~p~~~El~~~ 229 (304)
T PRK07340 200 TPVYPE--AARAGRLVVAVGAFTPDMAELAPR 229 (304)
T ss_pred CceeCc--cCCCCCEEEecCCCCCCcccCCHH
Confidence 543333 4799999999997653 3344433
No 309
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.36 E-value=0.024 Score=50.26 Aligned_cols=97 Identities=16% Similarity=0.148 Sum_probs=74.6
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+....+..++..+.-- .|++++|+|- ..+|.-+..++...|++|++..+....+.
T Consensus 137 ~~~PcTp~avi~ll~~y~i~l--~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~----------------- 197 (284)
T PRK14177 137 TYLPCTPYGMVLLLKEYGIDV--TGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLP----------------- 197 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH-----------------
Confidence 456777777777777665333 7999999999 99999999999999999998885433222
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+..+..|+++-++|....+. -+++++|..++++|...
T Consensus 198 ----~~~~~ADIvIsAvGk~~~i~--~~~ik~gavVIDvGin~ 234 (284)
T PRK14177 198 ----SIVRQADIIVGAVGKPEFIK--ADWISEGAVLLDAGYNP 234 (284)
T ss_pred ----HHHhhCCEEEEeCCCcCccC--HHHcCCCCEEEEecCcc
Confidence 12357899999999876433 47999999999999754
No 310
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.023 Score=50.08 Aligned_cols=75 Identities=21% Similarity=0.284 Sum_probs=52.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCC-eE--eeCccHHHHHhc---CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GAD-EF--ILSTNAMQMQAG---KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~~--v~~~~~~~~~~~---~~~~d~v 252 (360)
.+++++|.|+ +++|..+++.+...|++|++++++.++.+.+.+.+ +.. .. .|-.+.+..... ..++|++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 4789999999 99999999988889999999999988766544322 321 11 233333332221 3579999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|++.|.
T Consensus 86 v~~ag~ 91 (259)
T PRK06125 86 VNNAGA 91 (259)
T ss_pred EECCCC
Confidence 999873
No 311
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.36 E-value=0.023 Score=50.36 Aligned_cols=97 Identities=12% Similarity=0.133 Sum_probs=74.7
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+..+.+..|+..+.-- .|++++|+|. ..+|.=++.++...|++|++..+....+. +
T Consensus 136 ~~~PcTp~aii~lL~~y~i~l--~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~---~------------- 197 (282)
T PRK14180 136 CLESCTPKGIMTMLREYGIKT--EGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK---S------------- 197 (282)
T ss_pred CcCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHH---H-------------
Confidence 457887777777787765433 7999999999 99999999999999999998875432211 1
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
..+..|+++-++|....+. -+++++|..++++|...
T Consensus 198 -----~~k~ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin~ 233 (282)
T PRK14180 198 -----HTTKADILIVAVGKPNFIT--ADMVKEGAVVIDVGINH 233 (282)
T ss_pred -----HhhhcCEEEEccCCcCcCC--HHHcCCCcEEEEecccc
Confidence 2357899999999876544 37899999999999754
No 312
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.35 E-value=0.019 Score=50.99 Aligned_cols=96 Identities=14% Similarity=0.171 Sum_probs=72.7
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
.+||+..+....|+..+.-- .|++++|+|. +.+|.-.+.++...|++|++.......
T Consensus 137 ~~PcTp~avi~lL~~~~i~l--~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~-------------------- 194 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVEL--EGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRN-------------------- 194 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCC--------------------
Confidence 56777777777777665333 7999999999 999999999999999999987422211
Q ss_pred HHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
..+..+..|+|+-++|....+... ++++|..++++|...
T Consensus 195 -l~~~~~~ADIVI~avg~~~~v~~~--~ik~GavVIDvgin~ 233 (284)
T PRK14179 195 -LAEVARKADILVVAIGRGHFVTKE--FVKEGAVVIDVGMNR 233 (284)
T ss_pred -HHHHHhhCCEEEEecCccccCCHH--HccCCcEEEEeccee
Confidence 122345799999999988766554 599999999998754
No 313
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.35 E-value=0.024 Score=49.96 Aligned_cols=75 Identities=16% Similarity=0.227 Sum_probs=53.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHh-------cCCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQA-------GKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~-------~~~~~d~v 252 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.++.... .|-.+.+.... ....+|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4688999999 9999999999998999999999999887776654542211 23333322221 13578999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
+.+.|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998873
No 314
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.08 Score=47.22 Aligned_cols=75 Identities=16% Similarity=0.182 Sum_probs=51.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCC--C-e--EeeCccHHHHH---h---cCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGA--D-E--FILSTNAMQMQ---A---GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~--~-~--~v~~~~~~~~~---~---~~~~ 248 (360)
.++++||+|+ |.+|...+..+...|++|++++++.++.+.+.+. .+. . . ..|..+.+... . ...+
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 3578999999 9999999998888899999999988766554332 221 1 1 12444433221 1 1357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++.+.|.
T Consensus 82 id~vv~~ag~ 91 (280)
T PRK06914 82 IDLLVNNAGY 91 (280)
T ss_pred eeEEEECCcc
Confidence 8999999874
No 315
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.055 Score=47.47 Aligned_cols=99 Identities=14% Similarity=0.149 Sum_probs=61.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHH---cCCCeE---eeCccHHHH-------Hh----
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIS-TSPSKEKEAKEL---LGADEF---ILSTNAMQM-------QA---- 244 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~-~~~~~~~~~~~~---~g~~~~---v~~~~~~~~-------~~---- 244 (360)
.+++++|+|+ |++|.++++.+...|++|+++. ++.++.+.+... .+.... .|-.+.+.. ..
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 5789999999 9999999999999999998875 454444333221 232211 122222111 11
Q ss_pred c-C-CCcCEEEEcCCCcc-------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 245 G-K-RTLDFILDTVSAKH-------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 245 ~-~-~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
. + .++|+++++.|... ..+.++..++..|+++.++...
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~ 147 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA 147 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcc
Confidence 0 1 37999999987320 1234556666778999988654
No 316
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.31 E-value=0.024 Score=50.57 Aligned_cols=130 Identities=19% Similarity=0.244 Sum_probs=77.2
Q ss_pred cceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHH
Q 018158 145 YRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKE 223 (360)
Q Consensus 145 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~ 223 (360)
....+++.+++.+-. .....|++ +++.+... +++|+++|=+|+|. |.++|..+|. |+ +|++++.++...+.
T Consensus 129 ~~~~i~lDPGlAFGT----G~HpTT~l-cL~~Le~~-~~~g~~vlDvGcGS-GILaIAa~kL-GA~~v~g~DiDp~AV~a 200 (300)
T COG2264 129 DELNIELDPGLAFGT----GTHPTTSL-CLEALEKL-LKKGKTVLDVGCGS-GILAIAAAKL-GAKKVVGVDIDPQAVEA 200 (300)
T ss_pred CceEEEEccccccCC----CCChhHHH-HHHHHHHh-hcCCCEEEEecCCh-hHHHHHHHHc-CCceEEEecCCHHHHHH
Confidence 356778877775532 23333322 33333222 34899999999953 7777766665 66 69999999876655
Q ss_pred HHHH---cCCCeEeeCccHHHH-HhcCCCcCEEEEcC-CC--cccHHHHHHHhccCCEEEEeCCCC
Q 018158 224 AKEL---LGADEFILSTNAMQM-QAGKRTLDFILDTV-SA--KHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 224 ~~~~---~g~~~~v~~~~~~~~-~~~~~~~d~vid~~-g~--~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
++++ .+.+..+........ ...++.+|+|+-.+ .. .....++.+.++++|+++..|...
T Consensus 201 a~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~ 266 (300)
T COG2264 201 ARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILE 266 (300)
T ss_pred HHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehH
Confidence 5553 233211100000000 11146899998544 11 123578889999999999999765
No 317
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.30 E-value=0.026 Score=49.98 Aligned_cols=96 Identities=17% Similarity=0.172 Sum_probs=73.9
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
.+||+..+.+..++...--- .|++++|+|- ..+|.=+..++...|++|++..+....+.
T Consensus 137 ~~PcTp~av~~lL~~~~i~l--~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~------------------ 196 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDI--EGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLK------------------ 196 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCC--CCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHH------------------
Confidence 56787777777777765323 7999999999 99999999999999999999875432221
Q ss_pred HHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+..+..|+++-++|....+. -+++++|..++++|...
T Consensus 197 ---~~~~~ADIvIsAvGkp~~i~--~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 197 ---EVCKKADILVVAIGRPKFID--EEYVKEGAIVIDVGTSS 233 (278)
T ss_pred ---HHHhhCCEEEEcCCCcCccC--HHHcCCCcEEEEeeccc
Confidence 12356899999999876443 36799999999998764
No 318
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.30 E-value=0.041 Score=47.14 Aligned_cols=96 Identities=15% Similarity=0.095 Sum_probs=62.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe--------------e--CccHHHHH-hcC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI--------------L--STNAMQMQ-AGK 246 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v--------------~--~~~~~~~~-~~~ 246 (360)
++.+||+.|+|. |.-++-+|. .|.+|++++.++...+.+.++.+..... . ..+..... ...
T Consensus 34 ~~~rvLd~GCG~-G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~ 111 (213)
T TIGR03840 34 AGARVFVPLCGK-SLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAADL 111 (213)
T ss_pred CCCeEEEeCCCc-hhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcccC
Confidence 778999999963 777777775 6999999999999888764434421100 0 00000000 112
Q ss_pred CCcCEEEEcCCC--------cccHHHHHHHhccCCEEEEeCCC
Q 018158 247 RTLDFILDTVSA--------KHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 247 ~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
..+|.++|+..- ...++.+.++|+++|++..++..
T Consensus 112 ~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~ 154 (213)
T TIGR03840 112 GPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD 154 (213)
T ss_pred CCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence 468999997642 12367899999999987666543
No 319
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.30 E-value=0.066 Score=47.06 Aligned_cols=98 Identities=15% Similarity=0.068 Sum_probs=62.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc-CCCeE-eeCcc-HHHH-HhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL-GADEF-ILSTN-AMQM-QAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~-g~~~~-v~~~~-~~~~-~~~~~~~d~vid~~g~ 258 (360)
.+.+++|+|+ |.+|..+++.+...|++|+++.|+.++........ +...+ .|..+ ...+ .....++|++|.+.|.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~ 95 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF 95 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence 4678999999 99999999888888999999999887654332211 12111 23333 2222 2223589999998774
Q ss_pred cc-------------cHHHHHHHhccC--CEEEEeCCC
Q 018158 259 KH-------------SLGPILELLKVN--GTLSVVGAP 281 (360)
Q Consensus 259 ~~-------------~~~~~~~~l~~~--G~~v~~g~~ 281 (360)
.. ....+++.++.. ++++.++..
T Consensus 96 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 96 RRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 21 123445555433 588887654
No 320
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.30 E-value=0.021 Score=50.56 Aligned_cols=96 Identities=17% Similarity=0.203 Sum_probs=66.9
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC-eE-eeCccHHHHHhcCCCcCEEEE--
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD-EF-ILSTNAMQMQAGKRTLDFILD-- 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~~-v~~~~~~~~~~~~~~~d~vid-- 254 (360)
++||+++|=+|+|- |-+++-+|+..|++|++++.|++..+.++++ .|.+ .+ +... ..+.....||-|+.
T Consensus 70 L~~G~~lLDiGCGW-G~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~---d~rd~~e~fDrIvSvg 145 (283)
T COG2230 70 LKPGMTLLDIGCGW-GGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ---DYRDFEEPFDRIVSVG 145 (283)
T ss_pred CCCCCEEEEeCCCh-hHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec---cccccccccceeeehh
Confidence 66999999999964 7778899999999999999999988877764 4533 11 1111 11223344888764
Q ss_pred ---cCCC---cccHHHHHHHhccCCEEEEeCCC
Q 018158 255 ---TVSA---KHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 255 ---~~g~---~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
-+|. ..-+..+.++|+++|++..-...
T Consensus 146 mfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~ 178 (283)
T COG2230 146 MFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT 178 (283)
T ss_pred hHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence 2333 22368889999999998765443
No 321
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.30 E-value=0.032 Score=49.60 Aligned_cols=75 Identities=24% Similarity=0.170 Sum_probs=56.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-----------eeCccHHHH----HhcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-----------ILSTNAMQM----QAGKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-----------v~~~~~~~~----~~~~~ 247 (360)
+...++|+|. .++|++.+.-++..|+.|+++.|+.+++..+++.++.... .+|...+.. +....
T Consensus 32 ~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~ 111 (331)
T KOG1210|consen 32 PRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEG 111 (331)
T ss_pred ccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccC
Confidence 5578899988 9999999999999999999999999999999887763211 122222221 22245
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
.+|.+|.|.|.
T Consensus 112 ~~d~l~~cAG~ 122 (331)
T KOG1210|consen 112 PIDNLFCCAGV 122 (331)
T ss_pred CcceEEEecCc
Confidence 78999999984
No 322
>PRK07985 oxidoreductase; Provisional
Probab=96.29 E-value=0.052 Score=49.02 Aligned_cols=99 Identities=12% Similarity=0.110 Sum_probs=62.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh--hHHHHHHHH---cCCCe---EeeCccHHHHH-------hcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP--SKEKEAKEL---LGADE---FILSTNAMQMQ-------AGKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~--~~~~~~~~~---~g~~~---~v~~~~~~~~~-------~~~~ 247 (360)
.++++||+|+ |++|.++++.+...|++|+++.++. ++.+.+.+. .|... ..|-.+.+... ...+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5789999999 9999999999989999999887543 233333321 34221 12333332221 1145
Q ss_pred CcCEEEEcCCCc--------------------------ccHHHHHHHhccCCEEEEeCCCC
Q 018158 248 TLDFILDTVSAK--------------------------HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 248 ~~d~vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
++|+++++.|.. ..++.++..|+.+|+++.++...
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~ 188 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQ 188 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCch
Confidence 789999988731 11234555566778999887644
No 323
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.29 E-value=0.061 Score=46.10 Aligned_cols=93 Identities=17% Similarity=0.045 Sum_probs=62.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
.+.+|||+|+|.++.-=+..+...|++|++++..-. ....+.+ .|.-..+. .+.+ ...-.++++||-|++.....
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~-~~~i~~~~-r~~~--~~dl~g~~LViaATdD~~vN 99 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKK-YGNLKLIK-GNYD--KEFIKDKHLIVIATDDEKLN 99 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHh-CCCEEEEe-CCCC--hHHhCCCcEEEECCCCHHHH
Confidence 678999999999999888888889999999986542 2333333 34222221 1110 11135799999999988765
Q ss_pred HHHHHHhccCCEEEEeCC
Q 018158 263 GPILELLKVNGTLSVVGA 280 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~ 280 (360)
..+....+..+.++....
T Consensus 100 ~~I~~~a~~~~~lvn~vd 117 (223)
T PRK05562 100 NKIRKHCDRLYKLYIDCS 117 (223)
T ss_pred HHHHHHHHHcCCeEEEcC
Confidence 666666666677766543
No 324
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.28 E-value=0.035 Score=49.34 Aligned_cols=97 Identities=15% Similarity=0.159 Sum_probs=73.5
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+..+.+..|+..+--- .|++++|+|. ..+|.-++.++...|++|++.......+
T Consensus 136 ~~~PcTp~av~~lL~~~~i~l--~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l------------------ 195 (284)
T PRK14190 136 TFLPCTPHGILELLKEYNIDI--SGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNL------------------ 195 (284)
T ss_pred CCCCCCHHHHHHHHHHcCCCC--CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhH------------------
Confidence 356787777777777765333 7999999999 9999999999999999999876433211
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+.-+..|+++-++|....+. -+++++|..++++|...
T Consensus 196 ---~~~~~~ADIvI~AvG~p~~i~--~~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 196 ---AELTKQADILIVAVGKPKLIT--ADMVKEGAVVIDVGVNR 233 (284)
T ss_pred ---HHHHHhCCEEEEecCCCCcCC--HHHcCCCCEEEEeeccc
Confidence 122356899999999875433 36789999999999764
No 325
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.029 Score=49.15 Aligned_cols=75 Identities=23% Similarity=0.280 Sum_probs=52.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC-eE--eeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD-EF--ILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~~--v~~~~~~~~~~-------~~~~~ 249 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.. .. .|..+.+.... .-..+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5688999999 99999999999999999999999887665554432 321 11 23333322221 13468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|+++++.|.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999998873
No 326
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=96.26 E-value=0.087 Score=40.33 Aligned_cols=87 Identities=18% Similarity=0.265 Sum_probs=61.0
Q ss_pred EEEEEcCChHHHHHHHHHHHc--CCeEE-EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAF--GHHVT-VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~--G~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
++.|+|.|.+|......++.. +.++. ++++++++.+.+.+++|.. . +.+.+.+.. ..++|+|+.++.......
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~--~~~~~~ll~-~~~~D~V~I~tp~~~h~~ 77 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-V--YTDLEELLA-DEDVDAVIIATPPSSHAE 77 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-E--ESSHHHHHH-HTTESEEEEESSGGGHHH
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-c--hhHHHHHHH-hhcCCEEEEecCCcchHH
Confidence 578999999998877666655 44654 6677777777777768866 3 233322221 247999999999888778
Q ss_pred HHHHHhccCCEEEEe
Q 018158 264 PILELLKVNGTLSVV 278 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~ 278 (360)
.+..+++.|- .+.+
T Consensus 78 ~~~~~l~~g~-~v~~ 91 (120)
T PF01408_consen 78 IAKKALEAGK-HVLV 91 (120)
T ss_dssp HHHHHHHTTS-EEEE
T ss_pred HHHHHHHcCC-EEEE
Confidence 8888888876 4444
No 327
>PRK08317 hypothetical protein; Provisional
Probab=96.25 E-value=0.042 Score=47.61 Aligned_cols=98 Identities=21% Similarity=0.244 Sum_probs=65.4
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHc-C--CCeEeeCccHHHHHhcCCCcCEEEEcC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKELL-G--ADEFILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~~-g--~~~~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
+.++++||-+|+|. |..+..+++..+ .++++++.+++.++.++++. . ....+...+..........+|+|+...
T Consensus 17 ~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 95 (241)
T PRK08317 17 VQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFDAVRSDR 95 (241)
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCceEEEEec
Confidence 44899999999976 888888888873 58999999999888887741 1 111111111111111245789988543
Q ss_pred C------CcccHHHHHHHhccCCEEEEeCC
Q 018158 257 S------AKHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 257 g------~~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
. -...+..+.++|+++|.++....
T Consensus 96 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 125 (241)
T PRK08317 96 VLQHLEDPARALAEIARVLRPGGRVVVLDT 125 (241)
T ss_pred hhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence 2 12357899999999999987653
No 328
>PLN02928 oxidoreductase family protein
Probab=96.25 E-value=0.02 Score=52.93 Aligned_cols=95 Identities=18% Similarity=0.172 Sum_probs=63.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC----C-CeEee-CccHHHHHhcCCCcCEEEEcCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG----A-DEFIL-STNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g----~-~~~v~-~~~~~~~~~~~~~~d~vid~~g 257 (360)
.|+++.|+|.|.+|..+++.++.+|++|++++++..+... .. ++ . ....+ ......+.+.-...|+|+.+..
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lP 235 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPE-DG-LLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCT 235 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhh-hh-hccccccccccccccCcccCHHHHHhhCCEEEECCC
Confidence 5899999999999999999999999999999986332111 10 10 0 00000 0011223344567899998876
Q ss_pred Ccc-----cHHHHHHHhccCCEEEEeCC
Q 018158 258 AKH-----SLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 258 ~~~-----~~~~~~~~l~~~G~~v~~g~ 280 (360)
... .-...++.|+++..+++++.
T Consensus 236 lt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 236 LTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred CChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 321 22578899999999998874
No 329
>PRK08589 short chain dehydrogenase; Validated
Probab=96.24 E-value=0.029 Score=49.94 Aligned_cols=74 Identities=15% Similarity=0.203 Sum_probs=50.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC---eEeeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD---EFILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~-------~~~~~ 249 (360)
.++++||+|+ +++|.++++.+...|++|++++++ ++.+.+.+.+ +.. ...|-.+.+.... ...++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 5789999999 999999998888889999999998 5444333223 321 1134333322221 13568
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999999874
No 330
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.24 E-value=0.014 Score=58.92 Aligned_cols=75 Identities=19% Similarity=0.248 Sum_probs=52.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh---------------------HHHHHHHHcCCCeEeeCcc--HH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS---------------------KEKEAKELLGADEFILSTN--AM 240 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~---------------------~~~~~~~~~g~~~~v~~~~--~~ 240 (360)
.+++|+|+|+|+.|+.++..+...|++|+++++.+. +.+.+++ +|.+...+..- .-
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~-~Gv~~~~~~~v~~~i 404 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSA-MGIEFELNCEVGKDI 404 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHH-CCeEEECCCEeCCcC
Confidence 689999999999999999999999999999987532 3445555 77543332211 00
Q ss_pred HHHhcCCCcCEEEEcCCCc
Q 018158 241 QMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~ 259 (360)
.......++|.+|.++|..
T Consensus 405 ~~~~~~~~~DavilAtGa~ 423 (654)
T PRK12769 405 SLESLLEDYDAVFVGVGTY 423 (654)
T ss_pred CHHHHHhcCCEEEEeCCCC
Confidence 1122235799999999853
No 331
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.24 E-value=0.033 Score=49.09 Aligned_cols=75 Identities=19% Similarity=0.179 Sum_probs=53.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC---eEeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD---EFILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~-------~~~~ 249 (360)
+++++||+|+ |.+|..+++.+...|++|++++++.++.+.+.+.+ +.. ...|..+.+..... ..++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999 99999999998889999999999988766554322 222 12344444333211 2468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|.+|.+.|.
T Consensus 91 d~vi~~ag~ 99 (259)
T PRK08213 91 DILVNNAGA 99 (259)
T ss_pred CEEEECCCC
Confidence 999999874
No 332
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.24 E-value=0.034 Score=48.22 Aligned_cols=74 Identities=19% Similarity=0.067 Sum_probs=49.4
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHh----c---CCCcCEEEEc
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQA----G---KRTLDFILDT 255 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~----~---~~~~d~vid~ 255 (360)
++++||+|+ |++|..+++.+...|++|+++++++++.....+..|...+ .|..+.+.... . ..++|+++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 468999999 9999999998888999999999877543322222553211 23333322211 1 3469999999
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
.|.
T Consensus 82 ag~ 84 (236)
T PRK06483 82 ASD 84 (236)
T ss_pred Ccc
Confidence 874
No 333
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=96.24 E-value=0.03 Score=50.98 Aligned_cols=98 Identities=16% Similarity=0.183 Sum_probs=69.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc-CC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF-GH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~-G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
...++.|+|+|..+...++.++.. +. +|.+.+++++..+.+.+.+....-..-...+..++.-.+.|+|+-|+.....
T Consensus 129 da~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~P 208 (330)
T COG2423 129 DASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEP 208 (330)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCC
Confidence 467889999999999988888864 66 6999999998877666433321111111122334556889999999987764
Q ss_pred HHHHHHHhccCCEEEEeCCCC
Q 018158 262 LGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 262 ~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+-.. +++++|-++..+|...
T Consensus 209 il~~-~~l~~G~hI~aiGad~ 228 (330)
T COG2423 209 VLKA-EWLKPGTHINAIGADA 228 (330)
T ss_pred eecH-hhcCCCcEEEecCCCC
Confidence 3333 7899999999998643
No 334
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.029 Score=49.10 Aligned_cols=75 Identities=15% Similarity=0.241 Sum_probs=51.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe---EeeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE---FILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~-------~~~~~ 249 (360)
.+++++|+|+ |.+|...++.+...|++|++++++.+....+.+.+ +... ..|..+.+.... ...++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 5688999999 99999999988888999999999876654443322 2211 233333332211 13469
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999984
No 335
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.03 Score=49.95 Aligned_cols=73 Identities=19% Similarity=0.201 Sum_probs=52.5
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe---EeeCccHHHHHh-------cCCCcCEEEE
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE---FILSTNAMQMQA-------GKRTLDFILD 254 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~-------~~~~~d~vid 254 (360)
+++||+|+ |.+|..+++.+...|++|++++++.++.+.+++..+... ..|..+.+.... ...++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57999999 999999998888889999999999888777766444321 123333322211 1356899999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
+.|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 9874
No 336
>PLN03075 nicotianamine synthase; Provisional
Probab=96.20 E-value=0.031 Score=49.98 Aligned_cols=96 Identities=13% Similarity=0.211 Sum_probs=66.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHcCC----CeEeeCc--cHHHHHhcCCCcCEEEEc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELLGA----DEFILST--NAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~g~----~~~v~~~--~~~~~~~~~~~~d~vid~ 255 (360)
++++|+-+|+|+.++.++.+++.+ +.+++.++.+++..+.+++.+.. ...+... +.........++|+||-.
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF~~ 202 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVFLA 202 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEEEe
Confidence 678999999999999888888755 34799999999988888875522 1111111 111111113679999876
Q ss_pred CC-------CcccHHHHHHHhccCCEEEEeC
Q 018158 256 VS-------AKHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 256 ~g-------~~~~~~~~~~~l~~~G~~v~~g 279 (360)
+= -...+..+.+.|++||.++.-.
T Consensus 203 ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 203 ALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 41 1234688899999999887664
No 337
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.20 E-value=0.025 Score=51.37 Aligned_cols=75 Identities=21% Similarity=0.236 Sum_probs=51.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----C-CC-e--EeeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----G-AD-E--FILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g-~~-~--~v~~~~~~~~~~~-------~~ 247 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ + .. . ..|-.+.+..... ..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 5789999999 99999999888888999999999887655433222 1 11 1 1243343322221 34
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++|+++|.
T Consensus 95 ~iD~li~nAg~ 105 (306)
T PRK06197 95 RIDLLINNAGV 105 (306)
T ss_pred CCCEEEECCcc
Confidence 69999999873
No 338
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.20 E-value=0.031 Score=49.03 Aligned_cols=75 Identities=20% Similarity=0.260 Sum_probs=51.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe-E--eeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE-F--ILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~-~--v~~~~~~~~~~-------~~~~~ 249 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++.+.+.+. .+... . .|..+.+.... ...++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999 9999999988888899999999998765544332 33221 1 23333322221 12468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|+++++.|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999999874
No 339
>PRK14967 putative methyltransferase; Provisional
Probab=96.19 E-value=0.1 Score=45.04 Aligned_cols=94 Identities=21% Similarity=0.208 Sum_probs=61.5
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHH---cCCCeEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKEL---LGADEFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~---~g~~~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
+++++++|-.|+|. |..++.+++. ++ +|++++.+++..+.++++ .+....+...+.... .....+|+|+...+
T Consensus 34 ~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~-~~~~~fD~Vi~npP 110 (223)
T PRK14967 34 LGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA-VEFRPFDVVVSNPP 110 (223)
T ss_pred cCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh-ccCCCeeEEEECCC
Confidence 34889999999986 8888888875 65 899999999887766553 333222222222111 12457999997532
Q ss_pred Cc---------------------------ccHHHHHHHhccCCEEEEe
Q 018158 258 AK---------------------------HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 258 ~~---------------------------~~~~~~~~~l~~~G~~v~~ 278 (360)
.. ..+..+.+.|+++|+++.+
T Consensus 111 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~ 158 (223)
T PRK14967 111 YVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV 158 (223)
T ss_pred CCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 10 1245677899999998865
No 340
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.18 E-value=0.034 Score=49.03 Aligned_cols=72 Identities=13% Similarity=0.060 Sum_probs=50.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE--eeCccHHHHHhc-------CCCcCEEE
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF--ILSTNAMQMQAG-------KRTLDFIL 253 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~--v~~~~~~~~~~~-------~~~~d~vi 253 (360)
++||+|+ +++|.++++.+...|++|+++++++++.+.+.+.+ +..+. .|-.+.+..... ..++|++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 5899999 99999999988889999999999988766554433 31111 233333222211 35799999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
++.|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99874
No 341
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.18 E-value=0.029 Score=49.05 Aligned_cols=74 Identities=15% Similarity=0.136 Sum_probs=49.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH--HHHHHHHcCCCe-E--eeCccHHHHHh-------cCCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK--EKEAKELLGADE-F--ILSTNAMQMQA-------GKRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~--~~~~~~~~g~~~-~--v~~~~~~~~~~-------~~~~~d 250 (360)
.++++||+|+ |++|..++..+...|++|++++++... .+.+.+ .+... . .|..+.+.... ...++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEA-LGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999 999999999888899999999987531 222233 44321 1 23333332221 135799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
+++++.|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99999874
No 342
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.17 E-value=0.073 Score=40.55 Aligned_cols=89 Identities=20% Similarity=0.214 Sum_probs=60.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe--eCccHHHHHhc-CCCcCEEEEcCCCcccHHH
Q 018158 188 IGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI--LSTNAMQMQAG-KRTLDFILDTVSAKHSLGP 264 (360)
Q Consensus 188 vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v--~~~~~~~~~~~-~~~~d~vid~~g~~~~~~~ 264 (360)
++|+|.|.+|...++.++..+.+|++++.++++.+.+++ .|.. ++ |..+.+.++.. -.+++.++-+++.....-.
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~-~~~~-~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~ 78 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEELRE-EGVE-VIYGDATDPEVLERAGIEKADAVVILTDDDEENLL 78 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-TTSE-EEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh-cccc-cccccchhhhHHhhcCccccCEEEEccCCHHHHHH
Confidence 578999999999999999977799999999999999988 6643 33 34444444444 4679999988876643223
Q ss_pred HHHHh---ccCCEEEEe
Q 018158 265 ILELL---KVNGTLSVV 278 (360)
Q Consensus 265 ~~~~l---~~~G~~v~~ 278 (360)
+...+ .+..+++..
T Consensus 79 ~~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 79 IALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHCCCCeEEEE
Confidence 32333 334455443
No 343
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.17 E-value=0.029 Score=56.75 Aligned_cols=110 Identities=16% Similarity=0.173 Sum_probs=70.8
Q ss_pred ceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEE
Q 018158 136 GYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVI 214 (360)
Q Consensus 136 ~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~ 214 (360)
+...|..+++...+.+ +..+.+++=.- .......-.++++||+|+ |++|.++++.+...|++|+++
T Consensus 378 ~~~~~~~~~~~~~f~~-eyw~~e~~kl~------------~~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~ 444 (676)
T TIGR02632 378 AVSEYVSLPEQEAFDI-EYWPLEEAKLR------------RMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLA 444 (676)
T ss_pred cccceecCchhhccch-hhhhhhHHhhc------------cCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEE
Confidence 3466777777777777 66666654211 111111115789999999 999999999888899999999
Q ss_pred eCChhHHHHHHHHc----CCCe----EeeCccHHHHHhc-------CCCcCEEEEcCCC
Q 018158 215 STSPSKEKEAKELL----GADE----FILSTNAMQMQAG-------KRTLDFILDTVSA 258 (360)
Q Consensus 215 ~~~~~~~~~~~~~~----g~~~----~v~~~~~~~~~~~-------~~~~d~vid~~g~ 258 (360)
+++.++.+.+.+.+ +... ..|-.+.+..... ..++|++|++.|.
T Consensus 445 ~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 445 DLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred eCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 99987766554332 3211 1243333333221 3479999999984
No 344
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=96.16 E-value=0.061 Score=49.07 Aligned_cols=89 Identities=26% Similarity=0.288 Sum_probs=65.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC-cc--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA-KH-- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~-~~-- 260 (360)
.|+++-|+|.|.+|.+.++.++..|++|+..++++. .+..+. .++.++- ..+.-...|++.-..+. ..
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~~-~~~~y~~-------l~ell~~sDii~l~~Plt~~T~ 215 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN-PEAEKE-LGARYVD-------LDELLAESDIISLHCPLTPETR 215 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC-hHHHhh-cCceecc-------HHHHHHhCCEEEEeCCCChHHh
Confidence 589999999999999999999999999999998875 233333 4444331 22344678998766553 22
Q ss_pred --cHHHHHHHhccCCEEEEeCCC
Q 018158 261 --SLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 261 --~~~~~~~~l~~~G~~v~~g~~ 281 (360)
.-...+..|++++.+|.++.-
T Consensus 216 hLin~~~l~~mk~ga~lVNtaRG 238 (324)
T COG1052 216 HLINAEELAKMKPGAILVNTARG 238 (324)
T ss_pred hhcCHHHHHhCCCCeEEEECCCc
Confidence 135788999999999999753
No 345
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.074 Score=47.91 Aligned_cols=99 Identities=15% Similarity=0.154 Sum_probs=61.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHH---cCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK-EKEAKEL---LGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~-~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |.+|..++..+...|++|++++++.++ .+.+... .|.... .|..+.+..... ..+
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~ 124 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR 124 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999 999999888888889999999877532 2222221 243221 233333222211 357
Q ss_pred cCEEEEcCCCcc--------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 249 LDFILDTVSAKH--------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|++|.+.|... ..+.+...+++.|+++.++...
T Consensus 125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~ 184 (290)
T PRK06701 125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSIT 184 (290)
T ss_pred CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 899999887420 1223345556678999887643
No 346
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.15 E-value=0.18 Score=39.24 Aligned_cols=91 Identities=15% Similarity=0.305 Sum_probs=60.6
Q ss_pred EEEEcC-ChHHHHHHHHHHHcC--CeEEEEe--CChhHHHHHHHHcCCCeEeeCccH--HHH------------------
Q 018158 188 IGIVGL-GGLGHVAVKFGKAFG--HHVTVIS--TSPSKEKEAKELLGADEFILSTNA--MQM------------------ 242 (360)
Q Consensus 188 vlI~Ga-g~vG~~aiqla~~~G--~~V~~~~--~~~~~~~~~~~~~g~~~~v~~~~~--~~~------------------ 242 (360)
+.|+|+ |.+|..++.+.+... ++|++.. ++-+.+.....+|.+..++..++. ...
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 578999 999999999999987 5666555 344454444444888777655443 111
Q ss_pred --Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEe
Q 018158 243 --QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 243 --~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
.+. ...+|+++++..+...+...+..++.+-++...
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaLA 120 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIALA 120 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE-
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEEe
Confidence 111 367999999998888899999999988776543
No 347
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=96.14 E-value=0.081 Score=49.02 Aligned_cols=93 Identities=15% Similarity=0.251 Sum_probs=67.4
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHc--CCeEEEEe--CChhHHHHHHHHcCCCeEeeCccH--HHHHh--------------
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAF--GHHVTVIS--TSPSKEKEAKELLGADEFILSTNA--MQMQA-------------- 244 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~--G~~V~~~~--~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~-------------- 244 (360)
++|.|+|+ |.+|..++...+.. .++|++++ ++.+++....++|++..++..++. ...+.
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 57899998 99999999988765 46777775 566666666666998877644432 11111
Q ss_pred ----c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEe
Q 018158 245 ----G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 245 ----~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
. ...+|+|++++++...+...+..++.|.++...
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA 121 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA 121 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence 0 235999999999887888899999998777664
No 348
>PRK08291 ectoine utilization protein EutC; Validated
Probab=96.14 E-value=0.047 Score=50.19 Aligned_cols=94 Identities=15% Similarity=0.197 Sum_probs=63.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHH-cCC-eEEEEeCChhHHHHHHHHc----CCCeEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKA-FGH-HVTVISTSPSKEKEAKELL----GADEFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~-~G~-~V~~~~~~~~~~~~~~~~~----g~~~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
..++++|+|+|..|.+.+..+.. .+. +|.+..++.++.+.+.+++ |.. +....+. .+.-.+.|+|+.+++
T Consensus 131 ~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~~d~---~~al~~aDiVi~aT~ 206 (330)
T PRK08291 131 DASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVARDV---HEAVAGADIIVTTTP 206 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEeCCH---HHHHccCCEEEEeeC
Confidence 45789999999999987776664 565 6999999999887776644 322 2222222 223356899999998
Q ss_pred CcccHHHHHHHhccCCEEEEeCCCC
Q 018158 258 AKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 258 ~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+-.. .+++++-++..+|...
T Consensus 207 s~~p~i~~-~~l~~g~~v~~vg~d~ 230 (330)
T PRK08291 207 SEEPILKA-EWLHPGLHVTAMGSDA 230 (330)
T ss_pred CCCcEecH-HHcCCCceEEeeCCCC
Confidence 65432222 4578887888887643
No 349
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.034 Score=48.70 Aligned_cols=75 Identities=17% Similarity=0.163 Sum_probs=52.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc--CCC-eE--eeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL--GAD-EF--ILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~--g~~-~~--v~~~~~~~~~~~-------~~~~d 250 (360)
++++++|+|+ |.+|..+++.+...|++|++++++.++.+...+.+ +.. .. .|..+.+..... ..++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999 99999988888888999999999987665554433 321 11 233333332221 35799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
+++.+.|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999984
No 350
>PRK00811 spermidine synthase; Provisional
Probab=96.12 E-value=0.078 Score=47.60 Aligned_cols=95 Identities=18% Similarity=0.232 Sum_probs=64.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCC-------C---eEeeCccHHHHHhcCCCcCEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGA-------D---EFILSTNAMQMQAGKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~-------~---~~v~~~~~~~~~~~~~~~d~v 252 (360)
..++||++|+|. |.++..+++..+. +|++++.+++-.+.+++.+.. + .++..+.........+.+|+|
T Consensus 76 ~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDvI 154 (283)
T PRK00811 76 NPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETENSFDVI 154 (283)
T ss_pred CCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCCcccEE
Confidence 568899999865 6677777887665 799999999988888875531 1 122222223333335689999
Q ss_pred EEcCCC----------cccHHHHHHHhccCCEEEEeC
Q 018158 253 LDTVSA----------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 253 id~~g~----------~~~~~~~~~~l~~~G~~v~~g 279 (360)
+.-... ...+..+.+.|+++|.++.-.
T Consensus 155 i~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 155 IVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS 191 (283)
T ss_pred EECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 853321 123568889999999998653
No 351
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.12 E-value=0.04 Score=48.38 Aligned_cols=75 Identities=19% Similarity=0.276 Sum_probs=52.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe-E--eeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE-F--ILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~-~--v~~~~~~~~~~-------~~~~~ 249 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +... . .|-.+.+.... ...++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999 99999999998889999999999887765554333 3211 1 23333322221 13569
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|+++.+.|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999974
No 352
>PLN02366 spermidine synthase
Probab=96.12 E-value=0.076 Score=48.12 Aligned_cols=95 Identities=16% Similarity=0.228 Sum_probs=62.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCC------C---eEeeCccHHHHHhc-CCCcCEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGA------D---EFILSTNAMQMQAG-KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~------~---~~v~~~~~~~~~~~-~~~~d~v 252 (360)
..++||++|+|. |.++..++++.+. +|++++.+++-.+.+++.++. + .++..+....++.. .+.+|+|
T Consensus 91 ~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDvI 169 (308)
T PLN02366 91 NPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDAI 169 (308)
T ss_pred CCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCEE
Confidence 678999999865 5567788887665 799999998877777775431 1 11222222233333 4579999
Q ss_pred EEcCCC----------cccHHHHHHHhccCCEEEEeC
Q 018158 253 LDTVSA----------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 253 id~~g~----------~~~~~~~~~~l~~~G~~v~~g 279 (360)
|.-... ...+..+.+.|+++|.++.-+
T Consensus 170 i~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 170 IVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred EEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 853322 123678889999999997643
No 353
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.039 Score=48.59 Aligned_cols=75 Identities=16% Similarity=0.131 Sum_probs=52.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHH---cCCCe---EeeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKEL---LGADE---FILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~ 248 (360)
.+++++|+|+ |++|..+++.+...|++ |++++++.++.....+. .+... ..|..+.+..... -.+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5788999999 99999999999999998 99999987655433221 34321 2344444332221 246
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|++.|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 9999999974
No 354
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.11 E-value=0.055 Score=45.76 Aligned_cols=92 Identities=18% Similarity=0.222 Sum_probs=59.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE-eeCccHHHHHhcCCCcCEEEEcCCC-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF-ILSTNAMQMQAGKRTLDFILDTVSA- 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~- 258 (360)
++.+||-+|+|. |..+..+++. |.+|++++.+++-.+.+++.. +...+ +...+.... .....+|+|+.....
T Consensus 30 ~~~~vLDiGcG~-G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I~~~~~~~ 106 (197)
T PRK11207 30 KPGKTLDLGCGN-GRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNL-TFDGEYDFILSTVVLM 106 (197)
T ss_pred CCCcEEEECCCC-CHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhC-CcCCCcCEEEEecchh
Confidence 667899999864 7777788875 889999999998776665532 22211 111111111 124569999976431
Q ss_pred -------cccHHHHHHHhccCCEEEEe
Q 018158 259 -------KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 259 -------~~~~~~~~~~l~~~G~~v~~ 278 (360)
...+..+.+.|+++|.++.+
T Consensus 107 ~~~~~~~~~~l~~i~~~LkpgG~~~~~ 133 (197)
T PRK11207 107 FLEAKTIPGLIANMQRCTKPGGYNLIV 133 (197)
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 13467888899999996544
No 355
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.11 E-value=0.1 Score=47.54 Aligned_cols=91 Identities=19% Similarity=0.192 Sum_probs=58.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH----------cCCC--e---EeeCccHHHHHhcCCCc
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL----------LGAD--E---FILSTNAMQMQAGKRTL 249 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~----------~g~~--~---~v~~~~~~~~~~~~~~~ 249 (360)
=++|.|+|+|.+|...++.+...|.+|++.+++++..+.+++. .|.. . .+... ....+.-.+.
T Consensus 7 i~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~--~~l~~av~~a 84 (321)
T PRK07066 7 IKTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFV--ATIEACVADA 84 (321)
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceec--CCHHHHhcCC
Confidence 3679999999999998888888999999999998866554331 1110 0 00000 1122334789
Q ss_pred CEEEEcCCCcc-----cHHHHHHHhccCCEEEEe
Q 018158 250 DFILDTVSAKH-----SLGPILELLKVNGTLSVV 278 (360)
Q Consensus 250 d~vid~~g~~~-----~~~~~~~~l~~~G~~v~~ 278 (360)
|+|++++.... .+..+-+.++++ .++..
T Consensus 85 DlViEavpE~l~vK~~lf~~l~~~~~~~-aIlaS 117 (321)
T PRK07066 85 DFIQESAPEREALKLELHERISRAAKPD-AIIAS 117 (321)
T ss_pred CEEEECCcCCHHHHHHHHHHHHHhCCCC-eEEEE
Confidence 99999998543 244555566666 44443
No 356
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.11 E-value=0.025 Score=46.24 Aligned_cols=90 Identities=22% Similarity=0.330 Sum_probs=58.7
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHH
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI 265 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 265 (360)
.+|-++|.|.+|...++-+...|++|++.++++++.+.+.+ .|+..+ .+. .+.....|+||-|+........+
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~-~g~~~~---~s~---~e~~~~~dvvi~~v~~~~~v~~v 74 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE-AGAEVA---DSP---AEAAEQADVVILCVPDDDAVEAV 74 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH-TTEEEE---SSH---HHHHHHBSEEEE-SSSHHHHHHH
T ss_pred CEEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH-hhhhhh---hhh---hhHhhcccceEeecccchhhhhh
Confidence 36789999999999988888899999999999999999888 664322 122 12233469999999875544444
Q ss_pred H------HHhccCCEEEEeCCCC
Q 018158 266 L------ELLKVNGTLSVVGAPE 282 (360)
Q Consensus 266 ~------~~l~~~G~~v~~g~~~ 282 (360)
+ ..++++..+++.+..+
T Consensus 75 ~~~~~i~~~l~~g~iiid~sT~~ 97 (163)
T PF03446_consen 75 LFGENILAGLRPGKIIIDMSTIS 97 (163)
T ss_dssp HHCTTHGGGS-TTEEEEE-SS--
T ss_pred hhhhHHhhccccceEEEecCCcc
Confidence 3 3345566666665443
No 357
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.036 Score=49.38 Aligned_cols=75 Identities=17% Similarity=0.194 Sum_probs=51.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC-----CC-eE--eeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG-----AD-EF--ILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g-----~~-~~--v~~~~~~~~~~~-------~~ 247 (360)
+++++||+|+ |.+|..+++.+...|++|++++++.++.+...+.+. .. .+ .|-.+.+..... ..
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999 999999999999999999999998776554433221 11 11 233333222211 34
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++|.+.|.
T Consensus 86 ~~d~li~~ag~ 96 (276)
T PRK05875 86 RLHGVVHCAGG 96 (276)
T ss_pred CCCEEEECCCc
Confidence 78999999873
No 358
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.053 Score=47.65 Aligned_cols=74 Identities=20% Similarity=0.274 Sum_probs=52.0
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC--e--EeeCccHHHHHhc-------CCCcCEE
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD--E--FILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~--~--~v~~~~~~~~~~~-------~~~~d~v 252 (360)
+++++|+|+ |.+|...+..+...|++|++++++.++.+.+.+.+... + ..|..+.+..... ..++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999999 99999988888888999999999988776655434211 1 1244443333211 2468999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
+.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999974
No 359
>PRK12743 oxidoreductase; Provisional
Probab=96.10 E-value=0.096 Score=46.08 Aligned_cols=74 Identities=12% Similarity=0.131 Sum_probs=48.0
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHH---cCCCeE---eeCccHHHHHh-------cCCCc
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-SPSKEKEAKEL---LGADEF---ILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~-------~~~~~ 249 (360)
++++||+|+ |++|..+++.+...|++|+++.+ +.++.+.+.+. .|.... .|-.+.+.... ...++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999 99999999999999999988764 44443333221 453222 23333322211 13578
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.+.|.
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 999998874
No 360
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=96.09 E-value=0.04 Score=55.16 Aligned_cols=76 Identities=16% Similarity=0.347 Sum_probs=61.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc-CCCcCEEEEcCCCccc
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG-KRTLDFILDTVSAKHS 261 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~-~~~~d~vid~~g~~~~ 261 (360)
.++++|+|.|.+|+..++.++..|.++++++.++++.+.+++ .|...+ -|..+.+..++. -.++|.++-++++...
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~~~ 477 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQT 477 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-cCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCHHH
Confidence 468999999999999999999999999999999999999988 885433 255555555544 4689999999987654
No 361
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.09 E-value=0.055 Score=48.16 Aligned_cols=75 Identities=17% Similarity=0.226 Sum_probs=53.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC------eEeeCccHHHHHh-------c-
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD------EFILSTNAMQMQA-------G- 245 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~------~~v~~~~~~~~~~-------~- 245 (360)
.|+.+||+|+ .++|.+++..+-..|++|+++++++++.+..+..+ +.. ...|-.+.+.... .
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~ 86 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKF 86 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHh
Confidence 6899999999 99999999999999999999999999876655432 221 1123332222211 1
Q ss_pred CCCcCEEEEcCCC
Q 018158 246 KRTLDFILDTVSA 258 (360)
Q Consensus 246 ~~~~d~vid~~g~ 258 (360)
.++.|++++..|.
T Consensus 87 ~GkidiLvnnag~ 99 (270)
T KOG0725|consen 87 FGKIDILVNNAGA 99 (270)
T ss_pred CCCCCEEEEcCCc
Confidence 4679999998874
No 362
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.09 E-value=0.041 Score=47.86 Aligned_cols=75 Identities=17% Similarity=0.252 Sum_probs=53.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe-E--eeCccHHHHHh-------cCCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE-F--ILSTNAMQMQA-------GKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~--v~~~~~~~~~~-------~~~~~d~v 252 (360)
++++++|+|+ |.+|..+++.+...|++|+...++.++++.+...++... . .|-.+.+.... ...++|++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4689999999 999999999988899999999888877776655454321 1 23333322221 13579999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|.+.|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999884
No 363
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.08 E-value=0.043 Score=54.33 Aligned_cols=73 Identities=25% Similarity=0.263 Sum_probs=58.5
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe-eCccHHHHHhc-CCCcCEEEEcCCCc
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI-LSTNAMQMQAG-KRTLDFILDTVSAK 259 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~-~~~~d~vid~~g~~ 259 (360)
+.++|+|.|.+|..+++.++..|.+|++++.++++.+.+++ .|...+. |..+.+..++. -+++|.++-+++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~-~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE-RGIRAVLGNAANEEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-CCCeEEEcCCCCHHHHHhcCccccCEEEEEcCCh
Confidence 78899999999999999999999999999999999999987 7754333 44444444544 36899888777664
No 364
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=96.07 E-value=0.03 Score=49.72 Aligned_cols=98 Identities=18% Similarity=0.196 Sum_probs=64.7
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eE-eeCccHHHHHhcCCCcCEEEEcC---
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EF-ILSTNAMQMQAGKRTLDFILDTV--- 256 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~-v~~~~~~~~~~~~~~~d~vid~~--- 256 (360)
++++.+||=+|+|. |..+..+++..+++|++++.+++..+.+++++... .+ +...+.....-....+|+|+..-
T Consensus 50 l~~~~~VLDiGcG~-G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~FD~V~s~~~l~ 128 (263)
T PTZ00098 50 LNENSKVLDIGSGL-GGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTFDMIYSRDAIL 128 (263)
T ss_pred CCCCCEEEEEcCCC-ChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCeEEEEEhhhHH
Confidence 45899999999863 55566777777899999999999888888754421 11 11111111111135699998621
Q ss_pred --C---CcccHHHHHHHhccCCEEEEeCC
Q 018158 257 --S---AKHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 257 --g---~~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
+ ....+..+.+.|++||+++....
T Consensus 129 h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 129 HLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 1 12346788899999999987754
No 365
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.04 Score=48.64 Aligned_cols=74 Identities=12% Similarity=0.129 Sum_probs=50.5
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe---EeeCccHHHHHhc-------CCCcC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE---FILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~d 250 (360)
++++||+|+ |.+|..+++.+...|++|++++++.++.+.+.+. .+... ..|..+.+..... ..++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357999999 9999999999889999999999987765544332 23321 1233333322211 24799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|.+.|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999874
No 366
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.07 E-value=0.042 Score=48.77 Aligned_cols=97 Identities=18% Similarity=0.207 Sum_probs=73.7
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+..+.+..|+..+--- .|++++|+|- ..+|.=++.++...|++|++..+....+.
T Consensus 134 ~~~PcTp~avi~lL~~~~i~l--~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~----------------- 194 (282)
T PRK14169 134 TVVASTPYGIMALLDAYDIDV--AGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLK----------------- 194 (282)
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHH-----------------
Confidence 356777777777777665333 7999999999 99999999999999999998864432221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+..|+++-++|....+. -+++++|..++++|...
T Consensus 195 ----~~~~~ADIvI~AvG~p~~i~--~~~vk~GavVIDvGin~ 231 (282)
T PRK14169 195 ----QLTKEADILVVAVGVPHFIG--ADAVKPGAVVIDVGISR 231 (282)
T ss_pred ----HHHhhCCEEEEccCCcCccC--HHHcCCCcEEEEeeccc
Confidence 12356899999999876433 36899999999999754
No 367
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.06 E-value=0.034 Score=48.26 Aligned_cols=88 Identities=18% Similarity=0.301 Sum_probs=62.3
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh--HHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCCc---c
Q 018158 188 IGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS--KEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVSAK---H 260 (360)
Q Consensus 188 vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~--~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~~---~ 260 (360)
|+|+|+ |.+|..+++.+...+.+|.++.|+.. ..+.++. .|++.+ .|+.+.+.+...-+++|.||.+++.. .
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~-~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~ 79 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA-LGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSE 79 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH-TTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCH
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc-ccceEeecccCCHHHHHHHHcCCceEEeecCcchhhh
Confidence 689999 99999999999998999999999864 3455566 787543 35656666666678999999999832 1
Q ss_pred --cHHHHHHHhccCC--EEE
Q 018158 261 --SLGPILELLKVNG--TLS 276 (360)
Q Consensus 261 --~~~~~~~~l~~~G--~~v 276 (360)
....++++.+.-| +++
T Consensus 80 ~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 80 LEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHHHHHHHHT-SEEE
T ss_pred hhhhhhHHHhhhccccceEE
Confidence 1234555555544 454
No 368
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.11 Score=44.58 Aligned_cols=73 Identities=15% Similarity=0.145 Sum_probs=49.6
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE--eeCccHHHHHhc---CCCcCEEEEcCCC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF--ILSTNAMQMQAG---KRTLDFILDTVSA 258 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~--v~~~~~~~~~~~---~~~~d~vid~~g~ 258 (360)
.+++||+|+ |.+|..++..+... .+|++++++.++.+.+.+.+...++ .|-.+.+..... ..++|++|.+.|.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 357999999 99999888777766 8999999998876666542321122 233333333322 2379999999874
No 369
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.05 E-value=0.018 Score=52.32 Aligned_cols=89 Identities=19% Similarity=0.212 Sum_probs=63.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS-- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~-- 261 (360)
.|+++.|+|.|.+|...++.++..|++|++.+++.++.. +.+.+. ......+.-.+.|+|+.+......
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~---~~~~l~e~l~~aDvvv~~lPlt~~T~ 205 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA---GREELSAFLSQTRVLINLLPNTPETV 205 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec---ccccHHHHHhcCCEEEECCCCCHHHH
Confidence 679999999999999999999999999999987653211 212221 112233445678999988874322
Q ss_pred ---HHHHHHHhccCCEEEEeCCC
Q 018158 262 ---LGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 262 ---~~~~~~~l~~~G~~v~~g~~ 281 (360)
-...++.|+++..++++|.-
T Consensus 206 ~li~~~~l~~mk~ga~lIN~aRG 228 (312)
T PRK15469 206 GIINQQLLEQLPDGAYLLNLARG 228 (312)
T ss_pred HHhHHHHHhcCCCCcEEEECCCc
Confidence 24577889999988888753
No 370
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=96.05 E-value=0.042 Score=49.11 Aligned_cols=97 Identities=14% Similarity=0.128 Sum_probs=74.1
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
+.+||+....+..++..+.-- .|++++|+|- ..+|.=+..++...|++|++.......+
T Consensus 145 ~~~PcTp~avi~lL~~~~i~l--~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl------------------ 204 (299)
T PLN02516 145 LFLPCTPKGCLELLSRSGIPI--KGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDP------------------ 204 (299)
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH------------------
Confidence 457888777777787765322 6999999999 9999999999999999999997543221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+..+..|+++-++|....+. -+++++|..++++|...
T Consensus 205 ---~~~~~~ADIvv~AvGk~~~i~--~~~vk~gavVIDvGin~ 242 (299)
T PLN02516 205 ---ESIVREADIVIAAAGQAMMIK--GDWIKPGAAVIDVGTNA 242 (299)
T ss_pred ---HHHHhhCCEEEEcCCCcCccC--HHHcCCCCEEEEeeccc
Confidence 122357899999999864333 47899999999999754
No 371
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.05 E-value=0.04 Score=49.17 Aligned_cols=74 Identities=16% Similarity=0.169 Sum_probs=51.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe---EeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE---FILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~ 249 (360)
.+++++|+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ +... ..|..+.+..... -.++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 99999999999899999999999887665544422 3221 1233333222111 3579
Q ss_pred CEEEEcCC
Q 018158 250 DFILDTVS 257 (360)
Q Consensus 250 d~vid~~g 257 (360)
|++|+++|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999987
No 372
>PRK06720 hypothetical protein; Provisional
Probab=96.04 E-value=0.056 Score=44.48 Aligned_cols=41 Identities=20% Similarity=0.157 Sum_probs=34.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEA 224 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~ 224 (360)
.+++++|.|+ +++|...+..+...|++|++++++.++.+..
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~ 56 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQAT 56 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 5789999999 8999999888888899999999887765443
No 373
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.03 E-value=0.042 Score=48.86 Aligned_cols=96 Identities=19% Similarity=0.166 Sum_probs=73.5
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
.+||+..+.+..|+..+--- .|++++|+|. ..+|.=+..++...|++|++..+....+.
T Consensus 134 ~~PcTp~avi~lL~~~~i~l--~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~------------------ 193 (287)
T PRK14173 134 LEPCTPAGVVRLLKHYGIPL--AGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLP------------------ 193 (287)
T ss_pred CCCCCHHHHHHHHHHcCCCC--CCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHH------------------
Confidence 56777777777777665322 7999999999 99999999999999999998875443221
Q ss_pred HHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+..|+++-++|....+ --+++++|..++++|...
T Consensus 194 ---~~~~~ADIvIsAvGkp~~i--~~~~vk~GavVIDVGin~ 230 (287)
T PRK14173 194 ---AVTRRADVLVVAVGRPHLI--TPEMVRPGAVVVDVGINR 230 (287)
T ss_pred ---HHHhhCCEEEEecCCcCcc--CHHHcCCCCEEEEccCcc
Confidence 1235689999999987544 247899999999999764
No 374
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.03 E-value=0.061 Score=46.50 Aligned_cols=83 Identities=19% Similarity=0.264 Sum_probs=61.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH-HcCCCe-EeeCccHHHHHhc-CCCcCEEEEcCCCcccHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKE-LLGADE-FILSTNAMQMQAG-KRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~-~~g~~~-~v~~~~~~~~~~~-~~~~d~vid~~g~~~~~~ 263 (360)
+++|+|+|.+|...++.+...|..|+++++++++..+..+ .+.... +.+..+.+.++.+ -..+|+++-++|... .+
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~-~N 80 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE-VN 80 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH-HH
Confidence 5889999999999999999999999999999998777333 244322 2355555666666 478999999998864 34
Q ss_pred HHHHHhc
Q 018158 264 PILELLK 270 (360)
Q Consensus 264 ~~~~~l~ 270 (360)
.++..+.
T Consensus 81 ~i~~~la 87 (225)
T COG0569 81 SVLALLA 87 (225)
T ss_pred HHHHHHH
Confidence 4444443
No 375
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=96.02 E-value=0.044 Score=48.47 Aligned_cols=120 Identities=14% Similarity=0.190 Sum_probs=86.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH------------------HHHHhc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA------------------MQMQAG 245 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~------------------~~~~~~ 245 (360)
++.++++.|.|..|+.++-.++..|+-|+..+....+.+..++ +|++..-..++. ....+.
T Consensus 163 ~pA~vlv~G~Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~s-~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~~ 241 (356)
T COG3288 163 SPAKVLVIGAGVAGLAAIATAVRLGAIVTARDLRMFKKEQVES-LGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAEQ 241 (356)
T ss_pred cchhhhhhhHHHHHHHHHHHHhhcceEEehhhhhhHHhhhhhh-cccccccccccccCCCccccCCHHHHHHHHHHHHHH
Confidence 5677899999999999999999999999999999998888888 886533211110 011222
Q ss_pred CCCcCEEEEcC---CCcc---cHHHHHHHhccCCEEEEeCCCC-CCc--ccChhhHhccCcEEEEeec
Q 018158 246 KRTLDFILDTV---SAKH---SLGPILELLKVNGTLSVVGAPE-APF--ELPSFPLIFGKRSVKGSMT 304 (360)
Q Consensus 246 ~~~~d~vid~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~-~~~--~~~~~~~~~~~~~i~~~~~ 304 (360)
.+++|+||-+. |.+. ....+.+.|++|+.++++.... +.. +.+-.....+++++.|...
T Consensus 242 ~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~n 309 (356)
T COG3288 242 AKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTN 309 (356)
T ss_pred hcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecC
Confidence 68899999876 2221 2478899999999999986543 233 3333445678889988755
No 376
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.049 Score=47.35 Aligned_cols=75 Identities=17% Similarity=0.219 Sum_probs=52.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe-E--eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE-F--ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~-~--v~~~~~~~~~~~-------~~~~ 249 (360)
.+++++|+|+ |.+|..++..+...|++|+++++++++.+.+.+.+ +... . .|-.+.+..... ..++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5678999999 99999999999889999999999987765554322 2211 1 233333222111 3469
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|+++++.|.
T Consensus 85 d~lv~~ag~ 93 (241)
T PRK07454 85 DVLINNAGM 93 (241)
T ss_pred CEEEECCCc
Confidence 999999984
No 377
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.047 Score=47.69 Aligned_cols=73 Identities=21% Similarity=0.231 Sum_probs=50.5
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc-----CCC-eE--eeCccHHHHHh-------cCCC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL-----GAD-EF--ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~-----g~~-~~--v~~~~~~~~~~-------~~~~ 248 (360)
+++++|+|+ |++|..+++.+...|++|+++++++++.+.+...+ +.. ++ .|..+.+.... .-.+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999 99999888888888999999999988776554322 211 11 24444432211 1357
Q ss_pred cCEEEEcCC
Q 018158 249 LDFILDTVS 257 (360)
Q Consensus 249 ~d~vid~~g 257 (360)
+|++|.+.|
T Consensus 82 id~vi~~ag 90 (248)
T PRK08251 82 LDRVIVNAG 90 (248)
T ss_pred CCEEEECCC
Confidence 999999987
No 378
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.01 E-value=0.044 Score=49.01 Aligned_cols=96 Identities=18% Similarity=0.175 Sum_probs=72.6
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
..||+..+.+..|+..+--- .|++++|+|- ..+|.=+..++...|++|++..+....+.
T Consensus 137 ~~PcTp~aii~lL~~~~i~l--~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~------------------ 196 (297)
T PRK14186 137 LRSCTPAGVMRLLRSQQIDI--AGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLA------------------ 196 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHH------------------
Confidence 46777777777777665322 7999999999 99999999999999999998875432222
Q ss_pred HHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+..|+++-++|....+. -+++++|..++++|...
T Consensus 197 ---~~~~~ADIvIsAvGkp~~i~--~~~ik~gavVIDvGin~ 233 (297)
T PRK14186 197 ---SITREADILVAAAGRPNLIG--AEMVKPGAVVVDVGIHR 233 (297)
T ss_pred ---HHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEecccc
Confidence 12356899999999875433 47899999999999764
No 379
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.00 E-value=0.032 Score=48.50 Aligned_cols=75 Identities=16% Similarity=0.194 Sum_probs=51.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe---EeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE---FILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~ 249 (360)
.+++++|.|+ |.+|..++..+...|++|+++++++++.+.+.+. .+... ..|..+.+..... ..++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 4678999999 9999999988888999999999988765544332 23221 1233333322221 2479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999998874
No 380
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.12 Score=44.85 Aligned_cols=99 Identities=15% Similarity=0.110 Sum_probs=61.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHH---cCCC-eE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKEL---LGAD-EF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~---~g~~-~~--v~~~~~~~~~~~-------~~~ 248 (360)
++++++|+|+ |++|..+++.+...|++|+++.++.. +.+.+.+. .+.. .. .|-.+.+..... -.+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999 99999999999999999888776533 22222221 3322 11 233333222221 347
Q ss_pred cCEEEEcCCCcc-------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 249 LDFILDTVSAKH-------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|++|.+.|... ..+.++..++.+|+++.++...
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 142 (245)
T PRK12937 84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV 142 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence 999999987421 1233445556678998887543
No 381
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.053 Score=46.57 Aligned_cols=72 Identities=21% Similarity=0.223 Sum_probs=51.7
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEeeCccHHHHHh----c-CCCcCEEEEcCCC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFILSTNAMQMQA----G-KRTLDFILDTVSA 258 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~----~-~~~~d~vid~~g~ 258 (360)
++++|+|+ |.+|..+++.+...|++|++++++.+..+.++. .+.. ...|-.+.+.... . ..++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA-LGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-ccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 46899999 999999888887889999999999887777665 5543 2234444333222 1 3469999998874
No 382
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.041 Score=48.45 Aligned_cols=75 Identities=13% Similarity=0.084 Sum_probs=49.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCChhH-HHHHHHH---cCC-C-eE--eeCccHHHH----Hhc--CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAF-GHHVTVISTSPSK-EKEAKEL---LGA-D-EF--ILSTNAMQM----QAG--KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~-G~~V~~~~~~~~~-~~~~~~~---~g~-~-~~--v~~~~~~~~----~~~--~~ 247 (360)
.+++++|+|+ |++|...++.+... |++|++++++.++ ++.+.+. .+. + ++ .|..+.+.. ... ..
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 6789999999 99999988876666 5899999998775 4443222 232 1 22 233333221 111 24
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|+++++.|.
T Consensus 87 ~id~li~~ag~ 97 (253)
T PRK07904 87 DVDVAIVAFGL 97 (253)
T ss_pred CCCEEEEeeec
Confidence 79999988764
No 383
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.97 E-value=0.084 Score=45.90 Aligned_cols=75 Identities=16% Similarity=0.232 Sum_probs=50.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHc---CCCe-E--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVI-STSPSKEKEAKELL---GADE-F--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~-~~~~~~~~~~~~~~---g~~~-~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |.+|..++..+...|++|+++ .++.++.+.+...+ +... + .|..+.+..... ..+
T Consensus 4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4578999999 999999888888889999998 88877665444322 2211 1 233333322221 237
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (247)
T PRK05565 84 IDILVNNAGI 93 (247)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 384
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=95.97 E-value=0.057 Score=48.37 Aligned_cols=88 Identities=24% Similarity=0.252 Sum_probs=60.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc---HH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS---LG 263 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~---~~ 263 (360)
+|.|+|.|.+|...+..++..|.+|+++++++++.+.+++ .|...... .+. +.....|+||.|+..... ++
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~-~g~~~~~~-~~~----~~~~~aDlVilavp~~~~~~~~~ 75 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIE-RGLVDEAS-TDL----SLLKDCDLVILALPIGLLLPPSE 75 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCCccccc-CCH----hHhcCCCEEEEcCCHHHHHHHHH
Confidence 5789999999998888888889999999999998888887 66421111 111 123578999999875432 23
Q ss_pred HHHHHhccCCEEEEeCC
Q 018158 264 PILELLKVNGTLSVVGA 280 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~ 280 (360)
.+...++++..+.+++.
T Consensus 76 ~l~~~l~~~~ii~d~~S 92 (279)
T PRK07417 76 QLIPALPPEAIVTDVGS 92 (279)
T ss_pred HHHHhCCCCcEEEeCcc
Confidence 34444455555555554
No 385
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=95.96 E-value=0.063 Score=46.13 Aligned_cols=93 Identities=15% Similarity=0.089 Sum_probs=59.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe----------------eCccHHHH-HhcC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI----------------LSTNAMQM-QAGK 246 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v----------------~~~~~~~~-~~~~ 246 (360)
++.+||+.|+| .|.-++-||. .|++|++++.++...+.+.++.+..... ...+.... ....
T Consensus 37 ~~~rvL~~gCG-~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~~~ 114 (218)
T PRK13255 37 AGSRVLVPLCG-KSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAADL 114 (218)
T ss_pred CCCeEEEeCCC-ChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCcccC
Confidence 67899999986 3677777775 6999999999999888765434421100 00000000 0112
Q ss_pred CCcCEEEEcCCC--------cccHHHHHHHhccCCEEEEe
Q 018158 247 RTLDFILDTVSA--------KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 247 ~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~ 278 (360)
..+|.|+|...- ...+..+.++|+++|++..+
T Consensus 115 ~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 115 ADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred CCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 468999996631 12368889999999875443
No 386
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.96 E-value=0.048 Score=48.29 Aligned_cols=97 Identities=12% Similarity=0.159 Sum_probs=72.1
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+....+..|+..+--- .|++++|+|. ..+|.=.+.++...|++|++..+....+
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l--~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l------------------ 194 (281)
T PRK14183 135 GFVPCTPLGVMELLEEYEIDV--KGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDL------------------ 194 (281)
T ss_pred CCCCCcHHHHHHHHHHcCCCC--CCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCH------------------
Confidence 356777777777777665323 7999999999 7999999999999999998665332211
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+.+|+++-++|....+. -+++++|..++++|...
T Consensus 195 ---~~~~~~ADIvV~AvGkp~~i~--~~~vk~gavvIDvGin~ 232 (281)
T PRK14183 195 ---KAHTKKADIVIVGVGKPNLIT--EDMVKEGAIVIDIGINR 232 (281)
T ss_pred ---HHHHhhCCEEEEecCcccccC--HHHcCCCcEEEEeeccc
Confidence 112357899999999876433 37899999999999654
No 387
>PRK07069 short chain dehydrogenase; Validated
Probab=95.95 E-value=0.11 Score=45.42 Aligned_cols=71 Identities=18% Similarity=0.177 Sum_probs=47.7
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHcC----CCe----EeeCccHHHHHh-------cCCCcC
Q 018158 188 IGIVGL-GGLGHVAVKFGKAFGHHVTVISTS-PSKEKEAKELLG----ADE----FILSTNAMQMQA-------GKRTLD 250 (360)
Q Consensus 188 vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~-~~~~~~~~~~~g----~~~----~v~~~~~~~~~~-------~~~~~d 250 (360)
++|+|+ |.+|...++.+...|++|++++++ .++.+.+.+.+. ... ..|..+.+.... .-.++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 789998 999999988888889999999987 555555443332 111 124444333221 135689
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
+++.+.|.
T Consensus 82 ~vi~~ag~ 89 (251)
T PRK07069 82 VLVNNAGV 89 (251)
T ss_pred EEEECCCc
Confidence 99999873
No 388
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=95.95 E-value=0.41 Score=44.05 Aligned_cols=133 Identities=17% Similarity=0.187 Sum_probs=81.6
Q ss_pred cEEEEEcCChHH-HHHHHHHHHcC--Ce-EEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 186 KRIGIVGLGGLG-HVAVKFGKAFG--HH-VTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 186 ~~vlI~Gag~vG-~~aiqla~~~G--~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
-++.|+|+|.++ ...+..++..+ +. |.++++++++.+.+.+++|.... +.+.+.+-. ...+|+|+.++....+
T Consensus 4 irvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~--~~~~~~ll~-~~~iD~V~Iatp~~~H 80 (342)
T COG0673 4 IRVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKA--YTDLEELLA-DPDIDAVYIATPNALH 80 (342)
T ss_pred eEEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCcc--cCCHHHHhc-CCCCCEEEEcCCChhh
Confidence 468899997554 55666666654 45 55667888888877777986633 333322221 3459999999999888
Q ss_pred HHHHHHHhccCCEEEEeCCCCCCcccChhh------Hhcc-CcEE-EEeecCCHHHHHHHHHHHhcCCCccc
Q 018158 262 LGPILELLKVNGTLSVVGAPEAPFELPSFP------LIFG-KRSV-KGSMTGGMRETQEMMNVCGKYNITCN 325 (360)
Q Consensus 262 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~------~~~~-~~~i-~~~~~~~~~~~~~~~~~l~~~~l~~~ 325 (360)
...+...|+.|-+ |.+-. ++..+..+ +..+ ++.+ .+....-...++.+-+++.+|.+-.+
T Consensus 81 ~e~~~~AL~aGkh-Vl~EK---Pla~t~~ea~~l~~~a~~~~~~l~v~~~~Rf~p~~~~~k~li~~g~lG~v 148 (342)
T COG0673 81 AELALAALEAGKH-VLCEK---PLALTLEEAEELVELARKAGVKLMVGFNRRFDPAVQALKELIDSGALGEV 148 (342)
T ss_pred HHHHHHHHhcCCE-EEEcC---CCCCCHHHHHHHHHHHHHcCCceeeehhhhcCHHHHHHHHHHhcCCcCce
Confidence 8889888888854 44432 33333321 2222 2222 23333333457777788888877443
No 389
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.94 E-value=0.052 Score=48.17 Aligned_cols=97 Identities=19% Similarity=0.162 Sum_probs=74.2
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+..+.+..++..+.-- .|++++|+|- ..+|.=++.++...|++|++..+....+.
T Consensus 135 ~~~PcTp~avi~lL~~y~i~l--~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~----------------- 195 (282)
T PRK14166 135 GFLPCTPLGVMKLLKAYEIDL--EGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS----------------- 195 (282)
T ss_pred CCcCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH-----------------
Confidence 457787777777777765323 7999999999 99999999999999999998875442222
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+..+.+|+++-++|....+. -+++++|..++++|...
T Consensus 196 ----~~~~~ADIvIsAvGkp~~i~--~~~vk~GavVIDvGin~ 232 (282)
T PRK14166 196 ----LYTRQADLIIVAAGCVNLLR--SDMVKEGVIVVDVGINR 232 (282)
T ss_pred ----HHHhhCCEEEEcCCCcCccC--HHHcCCCCEEEEecccc
Confidence 12356899999999876443 36899999999999654
No 390
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=95.94 E-value=0.075 Score=47.09 Aligned_cols=98 Identities=16% Similarity=0.162 Sum_probs=64.6
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHcC------CC--eEeeCccHHHHHhcCCCcCE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKELLG------AD--EFILSTNAMQMQAGKRTLDF 251 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~~g------~~--~~v~~~~~~~~~~~~~~~d~ 251 (360)
++++++||-+|+|. |..+..+++..+ .+|++++.+++-++.++++.. .+ ..+.. +.....-....+|+
T Consensus 71 ~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~-d~~~lp~~~~sfD~ 148 (261)
T PLN02233 71 AKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEG-DATDLPFDDCYFDA 148 (261)
T ss_pred CCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEc-ccccCCCCCCCEeE
Confidence 34889999999854 556777887765 489999999998888876432 11 11111 11111112356999
Q ss_pred EEEcCCC------cccHHHHHHHhccCCEEEEeCCC
Q 018158 252 ILDTVSA------KHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 252 vid~~g~------~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
|+-..+- ...++++.+.|++||+++.+-..
T Consensus 149 V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~ 184 (261)
T PLN02233 149 ITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN 184 (261)
T ss_pred EEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence 9864431 23478999999999999877543
No 391
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.93 E-value=0.049 Score=48.36 Aligned_cols=96 Identities=13% Similarity=0.115 Sum_probs=73.3
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
.+||+....+..++..+.-- .|++++|+|. ..+|.=+..++...|++|++..+....+.
T Consensus 136 ~~PcTp~avi~lL~~~~i~l--~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~------------------ 195 (284)
T PRK14170 136 FVPCTPAGIIELIKSTGTQI--EGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLP------------------ 195 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH------------------
Confidence 57788777777777665322 6999999999 99999999999999999998875432211
Q ss_pred HHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+..+.+|+++-++|....+. -+++++|..++++|...
T Consensus 196 ---~~~~~ADIvI~AvG~~~~i~--~~~vk~GavVIDvGin~ 232 (284)
T PRK14170 196 ---QVAKEADILVVATGLAKFVK--KDYIKPGAIVIDVGMDR 232 (284)
T ss_pred ---HHHhhCCEEEEecCCcCccC--HHHcCCCCEEEEccCcc
Confidence 12356899999999875433 37899999999999764
No 392
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.93 E-value=0.049 Score=54.36 Aligned_cols=93 Identities=20% Similarity=0.175 Sum_probs=69.1
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc-CCCcCEEEEcCCCcccH
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG-KRTLDFILDTVSAKHSL 262 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~-~~~~d~vid~~g~~~~~ 262 (360)
.+.++|+|.|.+|+..++.++..|.++++++.++++.+.+++ .|...+ -|..+.+..+.. -.++|.++-++++....
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d~~~n 478 (601)
T PRK03659 400 KPQVIIVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRK-YGYKVYYGDATQLELLRAAGAEKAEAIVITCNEPEDT 478 (601)
T ss_pred cCCEEEecCchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-CCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCCHHHH
Confidence 367999999999999999999999999999999999999988 885433 355555555555 46899999999886543
Q ss_pred HHHHHH---hccCCEEEEe
Q 018158 263 GPILEL---LKVNGTLSVV 278 (360)
Q Consensus 263 ~~~~~~---l~~~G~~v~~ 278 (360)
..+... ..+.-+++.-
T Consensus 479 ~~i~~~~r~~~p~~~IiaR 497 (601)
T PRK03659 479 MKIVELCQQHFPHLHILAR 497 (601)
T ss_pred HHHHHHHHHHCCCCeEEEE
Confidence 333333 3445555544
No 393
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.92 E-value=0.051 Score=49.57 Aligned_cols=75 Identities=27% Similarity=0.292 Sum_probs=52.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCC--C--eE--eeCccHHHHHh-------cCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGA--D--EF--ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~--~--~~--v~~~~~~~~~~-------~~~~ 248 (360)
.+++++|+|+ +++|..+++.+...| ++|++++++.++.+.+.+.++. . .+ .|-.+.+.... ...+
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 3678999999 999999888888889 8999999998877666554431 1 11 24434332211 1357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|++.|.
T Consensus 82 iD~lI~nAG~ 91 (314)
T TIGR01289 82 LDALVCNAAV 91 (314)
T ss_pred CCEEEECCCc
Confidence 9999998873
No 394
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.92 E-value=0.084 Score=47.97 Aligned_cols=99 Identities=18% Similarity=0.227 Sum_probs=69.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC----CCeE----eeCccHHHH-------HhcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG----ADEF----ILSTNAMQM-------QAGKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g----~~~~----v~~~~~~~~-------~~~~~ 247 (360)
.+.+++|+|+ +++|..++..+-..|++|+..+|+.++.+.+++.+. ...+ .|-.+...+ .....
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~ 113 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG 113 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence 6789999999 999999999999999999999999987776666543 2222 233333222 22366
Q ss_pred CcCEEEEcCCCc-----------------------ccHHHHHHHhccC--CEEEEeCCCC
Q 018158 248 TLDFILDTVSAK-----------------------HSLGPILELLKVN--GTLSVVGAPE 282 (360)
Q Consensus 248 ~~d~vid~~g~~-----------------------~~~~~~~~~l~~~--G~~v~~g~~~ 282 (360)
..|+.|+.+|.. ...+.++..|+.. +|+|.++...
T Consensus 114 ~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~ 173 (314)
T KOG1208|consen 114 PLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSIL 173 (314)
T ss_pred CccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCcc
Confidence 789999988832 1235566666655 7999887644
No 395
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=95.92 E-value=0.13 Score=45.77 Aligned_cols=95 Identities=16% Similarity=0.186 Sum_probs=60.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCC---------CeEeeCccHHHHHhcCCCcCEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGA---------DEFILSTNAMQMQAGKRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~---------~~~v~~~~~~~~~~~~~~~d~vi 253 (360)
..++||++|+|. |..+..+++.... ++++++.+++-.+.+++.+.. -.++..+.........+.+|+|+
T Consensus 72 ~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~~~~yDvIi 150 (270)
T TIGR00417 72 NPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADTENTFDVII 150 (270)
T ss_pred CCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhCCCCccEEE
Confidence 456999999865 4455666676544 799999998877777774421 11222111222333356899997
Q ss_pred EcCCC----------cccHHHHHHHhccCCEEEEeC
Q 018158 254 DTVSA----------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 254 d~~g~----------~~~~~~~~~~l~~~G~~v~~g 279 (360)
--... ...++.+.+.|+++|.++...
T Consensus 151 ~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~ 186 (270)
T TIGR00417 151 VDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS 186 (270)
T ss_pred EeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence 43321 123568889999999998763
No 396
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.92 E-value=0.073 Score=46.99 Aligned_cols=92 Identities=27% Similarity=0.383 Sum_probs=62.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC---eEeeCccHHHHH-hcCCCcCEEEEcC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD---EFILSTNAMQMQ-AGKRTLDFILDTV 256 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~-~~~~~~d~vid~~ 256 (360)
++.+||-+|+|. |..+..+++. |.+|++++.+++.++.++++. |.. .++.. +..... .....+|+|+...
T Consensus 44 ~~~~vLDiGcG~-G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-d~~~l~~~~~~~fD~V~~~~ 120 (255)
T PRK11036 44 RPLRVLDAGGGE-GQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-AAQDIAQHLETPVDLILFHA 120 (255)
T ss_pred CCCEEEEeCCCc-hHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-CHHHHhhhcCCCCCEEEehh
Confidence 567888888853 6777777775 889999999999888877643 321 22222 222221 2346799998543
Q ss_pred C-----C-cccHHHHHHHhccCCEEEEe
Q 018158 257 S-----A-KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 257 g-----~-~~~~~~~~~~l~~~G~~v~~ 278 (360)
. . ...+..+.+.|++||.++.+
T Consensus 121 vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 121 VLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred HHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 2 1 23478899999999999765
No 397
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.92 E-value=0.17 Score=42.61 Aligned_cols=97 Identities=16% Similarity=0.151 Sum_probs=59.3
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHH---cCCCe--EeeCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKEL---LGADE--FILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~---~g~~~--~v~~~~~~~~~~~~~~~d~vid~ 255 (360)
.+++++||=+|+|. |..++.+++.. +.+|++++.+++..+.++++ ++... ++..+..+........+|.++-.
T Consensus 38 ~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d~v~~~ 116 (196)
T PRK07402 38 LEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPDRVCIE 116 (196)
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCCEEEEE
Confidence 34888888888743 55556666554 56899999999887777653 45332 23222222222222334555432
Q ss_pred CCC--cccHHHHHHHhccCCEEEEeC
Q 018158 256 VSA--KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 256 ~g~--~~~~~~~~~~l~~~G~~v~~g 279 (360)
.+. ...+..+.+.|+++|+++...
T Consensus 117 ~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 117 GGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred CCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 222 245788889999999998774
No 398
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.90 E-value=0.051 Score=48.50 Aligned_cols=97 Identities=11% Similarity=0.066 Sum_probs=73.9
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+..+.+..|+..+.-- .|++++|+|. ..+|.=+..++...|++|++..+....+.
T Consensus 138 ~~~PcTp~avi~lL~~~~i~l--~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~----------------- 198 (294)
T PRK14187 138 CLIPCTPKGCLYLIKTITRNL--SGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLA----------------- 198 (294)
T ss_pred CccCcCHHHHHHHHHHhCCCC--CCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHH-----------------
Confidence 456777777777777665333 7999999999 99999999999999999998885432221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+..+.+|+++-++|....+. -+++++|..++++|...
T Consensus 199 ----~~~~~ADIvVsAvGkp~~i~--~~~ik~gaiVIDVGin~ 235 (294)
T PRK14187 199 ----DYCSKADILVAAVGIPNFVK--YSWIKKGAIVIDVGINS 235 (294)
T ss_pred ----HHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEecccc
Confidence 12357899999999875433 37899999999999754
No 399
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=95.87 E-value=0.1 Score=45.43 Aligned_cols=75 Identities=15% Similarity=0.158 Sum_probs=47.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-ChhHHHH-HHH--HcCCCeE---eeCccHHHHHh-------cCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-SPSKEKE-AKE--LLGADEF---ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-~~~~~~~-~~~--~~g~~~~---v~~~~~~~~~~-------~~~~ 248 (360)
.+++++|+|+ |++|..+++.+...|++|++..+ +..+... +.+ ..+.... .|..+.+.... ...+
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4688999999 99999999999999999887543 3333222 221 1343322 23333322211 1357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++++.|.
T Consensus 82 id~li~~ag~ 91 (246)
T PRK12938 82 IDVLVNNAGI 91 (246)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 400
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.87 E-value=0.06 Score=47.29 Aligned_cols=75 Identities=21% Similarity=0.225 Sum_probs=52.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe-E--eeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE-F--ILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~-~--v~~~~~~~~~~-------~~~~~ 249 (360)
.+++++|+|+ |.+|..++..+...|++|++++++.++.+.+.+. .+... . .|..+.+.... .-.++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 6889999999 9999999988888899999999998765554332 34221 1 23333322211 13468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|.+|.+.|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999999884
No 401
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.86 E-value=0.055 Score=47.20 Aligned_cols=75 Identities=17% Similarity=0.215 Sum_probs=50.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe-E--eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE-F--ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~-~--v~~~~~~~~~~~-------~~~~ 249 (360)
.+++++|+|+ |.+|..++..+...|++|++++|+.++...+... .+... + .|-.+.+..... ..++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 5689999999 9999999988888899999999986654443322 23211 1 233333222221 2479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999999864
No 402
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=95.85 E-value=0.059 Score=49.41 Aligned_cols=75 Identities=17% Similarity=0.186 Sum_probs=51.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHcCC-C-eE--eeCccHHHHHhcCCCcCEEEEcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKELLGA-D-EF--ILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~~g~-~-~~--v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
.++++||+|+ |.+|..+++.+...| .+|++++++..+...+...+.. . .. .|-.+.+.....-.++|+||.++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 4788999999 999998888777765 6899998876655444332321 1 11 24444444444445799999988
Q ss_pred CC
Q 018158 257 SA 258 (360)
Q Consensus 257 g~ 258 (360)
|.
T Consensus 83 g~ 84 (324)
T TIGR03589 83 AL 84 (324)
T ss_pred cc
Confidence 74
No 403
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.84 E-value=0.051 Score=47.89 Aligned_cols=74 Identities=15% Similarity=0.141 Sum_probs=49.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe---EeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE---FILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|...++.+...|++|++++++ ++.+.+.+. .+... ..|-.+.+..... ..++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 999999999999999999999987 333333221 34221 1233333322211 3478
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|+++.+.|.
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 999998874
No 404
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=95.83 E-value=0.077 Score=49.18 Aligned_cols=132 Identities=14% Similarity=0.106 Sum_probs=81.8
Q ss_pred ccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh-----------------
Q 018158 157 MDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS----------------- 219 (360)
Q Consensus 157 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~----------------- 219 (360)
..+|....+.+.+- .++...+.-- .|.+|.|.|.|.+|..+++.+...|++|++++.+..
T Consensus 182 r~~aTg~Gv~~~~~-~a~~~~g~~l--~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g~i~~~~Gld~~~l~~~~ 258 (411)
T COG0334 182 RSEATGYGVFYAIR-EALKALGDDL--EGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKGGIYDEDGLDVEALLELK 258 (411)
T ss_pred CCcccceehHHHHH-HHHHHcCCCc--CCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCCceecCCCCCHHHHHHHh
Confidence 44555566555554 5565555322 799999999999999999999999999999998776
Q ss_pred -HHHHHHHHcCCCeEeeCccH------------------HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCC
Q 018158 220 -KEKEAKELLGADEFILSTNA------------------MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 220 -~~~~~~~~~g~~~~v~~~~~------------------~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
+...+...+|++.+-+..-. +.+. .-+.++|.+.+.++.. .++.+.+...|.++.-..
T Consensus 259 ~~~~~v~~~~ga~~i~~~e~~~~~cDIl~PcA~~n~I~~~na~--~l~ak~V~EgAN~P~t-~eA~~i~~erGIl~~PD~ 335 (411)
T COG0334 259 ERRGSVAEYAGAEYITNEELLEVDCDILIPCALENVITEDNAD--QLKAKIVVEGANGPTT-PEADEILLERGILVVPDI 335 (411)
T ss_pred hhhhhHHhhcCceEccccccccccCcEEcccccccccchhhHH--HhhhcEEEeccCCCCC-HHHHHHHHHCCCEEcChh
Confidence 55566664554433210000 0000 1235577777776644 566666666666654433
Q ss_pred C--CCCcccChhhHhc
Q 018158 281 P--EAPFELPSFPLIF 294 (360)
Q Consensus 281 ~--~~~~~~~~~~~~~ 294 (360)
. .+.+..+...+..
T Consensus 336 laNAGGV~vS~~E~~q 351 (411)
T COG0334 336 LANAGGVIVSYLEWVQ 351 (411)
T ss_pred hccCcCeeeehHHHHh
Confidence 2 2455555555543
No 405
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=95.83 E-value=0.096 Score=54.91 Aligned_cols=96 Identities=15% Similarity=0.132 Sum_probs=69.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc-CCe-------------EEEEeCChhHHHHHHHHc-CCC-eEeeCccHHHHHhcCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF-GHH-------------VTVISTSPSKEKEAKELL-GAD-EFILSTNAMQMQAGKR 247 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~-G~~-------------V~~~~~~~~~~~~~~~~~-g~~-~~v~~~~~~~~~~~~~ 247 (360)
..++|+|+|+|-+|...+..+... +++ |++.+++.++.+.+.+.+ +.+ ..+|..+.+.+...-.
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 467999999999999888887654 334 888888888777776645 432 2345666555555445
Q ss_pred CcCEEEEcCCCcccHHHHHHHhccCCEEEEeC
Q 018158 248 TLDFILDTVSAKHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 248 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 279 (360)
++|+|+.|++...+...+..+++.+-+++...
T Consensus 648 ~~DaVIsalP~~~H~~VAkaAieaGkHvv~ek 679 (1042)
T PLN02819 648 QVDVVISLLPASCHAVVAKACIELKKHLVTAS 679 (1042)
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCCCEEECc
Confidence 69999999998766677777777777776554
No 406
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=95.83 E-value=0.063 Score=49.02 Aligned_cols=89 Identities=24% Similarity=0.238 Sum_probs=59.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.|+++-|+|.|.+|...++.++.+|++|++.++...+. .... .+ +.-.. .+.+.-...|++...+.-.
T Consensus 141 ~gkTvGIiG~G~IG~~va~~l~afgm~v~~~d~~~~~~-~~~~-~~---~~~~~---~Ld~lL~~sDiv~lh~PlT~eT~ 212 (324)
T COG0111 141 AGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRE-RAGV-DG---VVGVD---SLDELLAEADILTLHLPLTPETR 212 (324)
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEECCCCchh-hhcc-cc---ceecc---cHHHHHhhCCEEEEcCCCCcchh
Confidence 38899999999999999999999999999999833221 1111 11 11111 2223345678887766521
Q ss_pred -ccHHHHHHHhccCCEEEEeCC
Q 018158 260 -HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 260 -~~~~~~~~~l~~~G~~v~~g~ 280 (360)
..-.+.+..|+++..+++++.
T Consensus 213 g~i~~~~~a~MK~gailIN~aR 234 (324)
T COG0111 213 GLINAEELAKMKPGAILINAAR 234 (324)
T ss_pred cccCHHHHhhCCCCeEEEECCC
Confidence 112577788998888877754
No 407
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.82 E-value=0.06 Score=47.66 Aligned_cols=75 Identities=16% Similarity=0.133 Sum_probs=52.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe---EeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE---FILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~ 249 (360)
.+++++|+|+ +++|..++..+...|++|++++++.++.+.+...+ |... ..|-.+.+..... -.++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5789999999 99999988888888999999999887765554322 4321 1233333322221 2568
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.+.|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999984
No 408
>PRK12746 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.11 Score=45.60 Aligned_cols=75 Identities=12% Similarity=0.131 Sum_probs=48.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHc---CCCe-E--eeCccHHHHHhc----------
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVI-STSPSKEKEAKELL---GADE-F--ILSTNAMQMQAG---------- 245 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~-~~~~~~~~~~~~~~---g~~~-~--v~~~~~~~~~~~---------- 245 (360)
.+++++|+|+ |.+|..+++.+...|++|+++ .++.++.+.+...+ +... + .|-.+.+.....
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 4678999999 999999999888889998775 67766554443322 2221 1 243343322111
Q ss_pred ---CCCcCEEEEcCCC
Q 018158 246 ---KRTLDFILDTVSA 258 (360)
Q Consensus 246 ---~~~~d~vid~~g~ 258 (360)
..++|++|.+.|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 1469999999874
No 409
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.81 E-value=0.065 Score=49.21 Aligned_cols=90 Identities=17% Similarity=0.187 Sum_probs=64.3
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-----------eEeeCccHHHHHhcCCCcCEEEE
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-----------EFILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-----------~~v~~~~~~~~~~~~~~~d~vid 254 (360)
-+|.|+|+|.+|.+.+..+...|.+|++.++++++.+.+.+ .+.. .+....+ ..+.....|+||-
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~-~~~~~~~~~g~~~~~~~~~~~~---~~e~~~~aD~Vi~ 80 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAA-ERENREYLPGVALPAELYPTAD---PEEALAGADFAVV 80 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-hCcccccCCCCcCCCCeEEeCC---HHHHHcCCCEEEE
Confidence 46899999999999999888889999999999887777665 3210 0111111 1222357899999
Q ss_pred cCCCcccHHHHHHHhccCCEEEEeCC
Q 018158 255 TVSAKHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 255 ~~g~~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
++.... +..+++.++++-.++++..
T Consensus 81 ~v~~~~-~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 81 AVPSKA-LRETLAGLPRALGYVSCAK 105 (328)
T ss_pred ECchHH-HHHHHHhcCcCCEEEEEee
Confidence 998874 5777788888766666643
No 410
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=95.81 E-value=0.095 Score=47.70 Aligned_cols=86 Identities=29% Similarity=0.325 Sum_probs=62.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.|+++.|+|.|.+|...+++++.+|++|++.++..... . .+.. +. .+.+.-...|+|..+....
T Consensus 144 ~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~~~~----~-~~~~----~~---~l~ell~~sDvv~lh~Plt~~T~ 211 (311)
T PRK08410 144 KGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKNK----N-EEYE----RV---SLEELLKTSDIISIHAPLNEKTK 211 (311)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCcccc----c-cCce----ee---cHHHHhhcCCEEEEeCCCCchhh
Confidence 68999999999999999999999999999999753211 1 1111 11 2334456789998877632
Q ss_pred -ccHHHHHHHhccCCEEEEeCCC
Q 018158 260 -HSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 260 -~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
..-.+.++.|+++..+++++.-
T Consensus 212 ~li~~~~~~~Mk~~a~lIN~aRG 234 (311)
T PRK08410 212 NLIAYKELKLLKDGAILINVGRG 234 (311)
T ss_pred cccCHHHHHhCCCCeEEEECCCc
Confidence 1236888999999999999753
No 411
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=95.81 E-value=0.018 Score=50.01 Aligned_cols=99 Identities=18% Similarity=0.270 Sum_probs=61.5
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHcC---CCeE-eeCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKELLG---ADEF-ILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~~g---~~~~-v~~~~~~~~~~~~~~~d~vid~ 255 (360)
.++|++||=+|+|+ |..+..+++..+ .+|++++-+++-++.++++.. ...+ ....+.+...-....+|+|..+
T Consensus 45 ~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp~~d~sfD~v~~~ 123 (233)
T PF01209_consen 45 LRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLPFPDNSFDAVTCS 123 (233)
T ss_dssp --S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB--S-TT-EEEEEEE
T ss_pred CCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhcCCCCceeEEEHH
Confidence 34889999988864 778888888876 489999999998888887632 2211 1111222222224679999987
Q ss_pred CCC------cccHHHHHHHhccCCEEEEeCCC
Q 018158 256 VSA------KHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 256 ~g~------~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
.|- ...+.++.+.|+|||+++.+...
T Consensus 124 fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~ 155 (233)
T PF01209_consen 124 FGLRNFPDRERALREMYRVLKPGGRLVILEFS 155 (233)
T ss_dssp S-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hhHHhhCCHHHHHHHHHHHcCCCeEEEEeecc
Confidence 763 23578999999999999877543
No 412
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.81 E-value=0.058 Score=47.96 Aligned_cols=97 Identities=20% Similarity=0.198 Sum_probs=72.8
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHH----cCCeEEEEeCChhHHHHHHHHcCCCeEee
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKA----FGHHVTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~----~G~~V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
..+||+....+..|+..+--- .|++++|+|- ..+|.=+..++.. .+++|+........+..
T Consensus 135 ~~~PcTp~av~~lL~~~~i~l--~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~------------ 200 (286)
T PRK14184 135 GFRPCTPAGVMTLLERYGLSP--AGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAE------------ 200 (286)
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHH------------
Confidence 356787777777777765333 7999999999 9999988888887 78999988855432222
Q ss_pred CccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 236 STNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 236 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.-+..|+++-++|.+..+. -+++++|..++++|...
T Consensus 201 ---------~~~~ADIVI~AvG~p~li~--~~~vk~GavVIDVGi~~ 236 (286)
T PRK14184 201 ---------ECREADFLFVAIGRPRFVT--ADMVKPGAVVVDVGINR 236 (286)
T ss_pred ---------HHHhCCEEEEecCCCCcCC--HHHcCCCCEEEEeeeec
Confidence 2346899999999876543 36779999999998654
No 413
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=95.78 E-value=0.18 Score=44.98 Aligned_cols=89 Identities=21% Similarity=0.271 Sum_probs=66.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSK-EKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI 265 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~-~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 265 (360)
+|-++|.|.+|.-.++-+...|.+|++.++++++ .+.++. .|+...-+. .+.....|+||-++++......+
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~-~Ga~~a~s~------~eaa~~aDvVitmv~~~~~V~~V 74 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAA-AGATVAASP------AEAAAEADVVITMLPDDAAVRAV 74 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHH-cCCcccCCH------HHHHHhCCEEEEecCCHHHHHHH
Confidence 5778899999999999899999999999999998 666666 787544222 22356799999999877554444
Q ss_pred H-------HHhccCCEEEEeCCCC
Q 018158 266 L-------ELLKVNGTLSVVGAPE 282 (360)
Q Consensus 266 ~-------~~l~~~G~~v~~g~~~ 282 (360)
+ ..++++..+++....+
T Consensus 75 ~~g~~g~~~~~~~G~i~IDmSTis 98 (286)
T COG2084 75 LFGENGLLEGLKPGAIVIDMSTIS 98 (286)
T ss_pred HhCccchhhcCCCCCEEEECCCCC
Confidence 3 3445777777776544
No 414
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.78 E-value=0.095 Score=44.49 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=30.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTS 217 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~ 217 (360)
.+.+|+|+|+|++|..+++.+...|. ++++++.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 46789999999999999999999998 79999876
No 415
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=95.76 E-value=0.041 Score=50.36 Aligned_cols=75 Identities=19% Similarity=0.221 Sum_probs=50.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CC--C-eE--eeCccHHHHHhcCCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GA--D-EF--ILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~--~-~~--v~~~~~~~~~~~~~~~d~vid 254 (360)
.++++||+|+ |.+|..++..+...|++|+++.++.++.......+ +. . .. .|..+.+.....-.++|+||.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 6789999999 99999999999889999998887765433322211 11 1 11 233444344444457999999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
+++.
T Consensus 84 ~A~~ 87 (325)
T PLN02989 84 TASP 87 (325)
T ss_pred eCCC
Confidence 9873
No 416
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.037 Score=49.08 Aligned_cols=72 Identities=18% Similarity=0.235 Sum_probs=49.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe-EeeCccHHHHHhc-------CCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE-FILSTNAMQMQAG-------KRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~-------~~~~d~vid 254 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++.+.. .+... ..|..+.+..... ...+|++|+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 4578999999 9999999988888899999999987654321 12221 2244444333222 346899999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
+.|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9984
No 417
>PRK05855 short chain dehydrogenase; Validated
Probab=95.74 E-value=0.12 Score=51.25 Aligned_cols=75 Identities=19% Similarity=0.214 Sum_probs=52.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.+.++||+|+ |++|...++.+...|++|++++++.++.+.+.+. .|.... .|-.+.+..... ..++
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999999 9999999888888999999999998776655432 243211 244443322221 3569
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999984
No 418
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.082 Score=46.63 Aligned_cols=75 Identities=21% Similarity=0.298 Sum_probs=50.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH--cCCCe---EeeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL--LGADE---FILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~--~g~~~---~v~~~~~~~~~~~-------~~~~d 250 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.+..+.+.+. .+... ..|..+.+..... ...+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999 9999999998888999999999887533333221 23221 1233333222221 35689
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|.+.|.
T Consensus 85 ~vi~~ag~ 92 (263)
T PRK08226 85 ILVNNAGV 92 (263)
T ss_pred EEEECCCc
Confidence 99998883
No 419
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.74 E-value=0.04 Score=44.24 Aligned_cols=89 Identities=28% Similarity=0.334 Sum_probs=56.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-------eeCccH-HHHHhcCCCcCEEEEcCCCc
Q 018158 188 IGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-------ILSTNA-MQMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 188 vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-------v~~~~~-~~~~~~~~~~d~vid~~g~~ 259 (360)
|+|+|+|.+|...+..++..|.+|..+.+.+ +.+.+++ -|..-. +..... .........+|++|-|+=..
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa~ 78 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKE-QGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKAY 78 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHH-HCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSGG
T ss_pred CEEECcCHHHHHHHHHHHHCCCceEEEEccc-cHHhhhh-eeEEEEecccceecccccccCcchhccCCCcEEEEEeccc
Confidence 6899999999998888888999999999888 7777766 452111 111000 00112357899999998554
Q ss_pred ccHHHHHHHhc----cCCEEEEeC
Q 018158 260 HSLGPILELLK----VNGTLSVVG 279 (360)
Q Consensus 260 ~~~~~~~~~l~----~~G~~v~~g 279 (360)
. ...+++.++ ++..++.+.
T Consensus 79 ~-~~~~l~~l~~~~~~~t~iv~~q 101 (151)
T PF02558_consen 79 Q-LEQALQSLKPYLDPNTTIVSLQ 101 (151)
T ss_dssp G-HHHHHHHHCTGEETTEEEEEES
T ss_pred c-hHHHHHHHhhccCCCcEEEEEe
Confidence 3 344444444 455666653
No 420
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=95.73 E-value=0.084 Score=47.68 Aligned_cols=87 Identities=18% Similarity=0.218 Sum_probs=62.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS-- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~-- 261 (360)
.|++|.|+|.|.+|.+.++.++..|.+|++..+.....+.+.. .|.. +. ...+.-...|+|+-+......
T Consensus 15 kgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~-~G~~-v~------sl~Eaak~ADVV~llLPd~~t~~ 86 (335)
T PRK13403 15 QGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKA-DGFE-VM------SVSEAVRTAQVVQMLLPDEQQAH 86 (335)
T ss_pred CcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHH-cCCE-EC------CHHHHHhcCCEEEEeCCChHHHH
Confidence 6899999999999999999999999999998766554455555 6653 21 223445678999998875432
Q ss_pred -H-HHHHHHhccCCEEEEe
Q 018158 262 -L-GPILELLKVNGTLSVV 278 (360)
Q Consensus 262 -~-~~~~~~l~~~G~~v~~ 278 (360)
+ ...+..|+++..++..
T Consensus 87 V~~~eil~~MK~GaiL~f~ 105 (335)
T PRK13403 87 VYKAEVEENLREGQMLLFS 105 (335)
T ss_pred HHHHHHHhcCCCCCEEEEC
Confidence 2 3466777887655444
No 421
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.73 E-value=0.063 Score=47.18 Aligned_cols=75 Identities=17% Similarity=0.184 Sum_probs=52.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe---EeeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE---FILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~-------~~~~~ 249 (360)
.+++++|+|+ |++|..++..+...|++|++++++.++.+.+.+. .+.+. ..|..+.+.... ...++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999 9999999998888999999999888776554332 23221 134444433222 13578
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|+++.+.|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999999874
No 422
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=95.72 E-value=0.089 Score=47.62 Aligned_cols=89 Identities=21% Similarity=0.203 Sum_probs=58.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe---EeeC--ccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE---FILS--TNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---~v~~--~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
++.|+|+|.+|.+.+..+...|.+|+.+++++++.+.+++ .|... .... ......... ..+|++|-|+....
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~~- 78 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDALNE-NGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAYQ- 78 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHHHH-cCCcccCCceeecccCCCChhHc-CCCCEEEEeccccc-
Confidence 5889999999998888888889999999998888777776 45321 0000 000111222 67999999987653
Q ss_pred HHHHHHHhc----cCCEEEEe
Q 018158 262 LGPILELLK----VNGTLSVV 278 (360)
Q Consensus 262 ~~~~~~~l~----~~G~~v~~ 278 (360)
+..++..++ ++..++.+
T Consensus 79 ~~~~~~~l~~~l~~~~~iv~~ 99 (304)
T PRK06522 79 LPAALPSLAPLLGPDTPVLFL 99 (304)
T ss_pred HHHHHHHHhhhcCCCCEEEEe
Confidence 344444444 34456554
No 423
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.72 E-value=0.068 Score=47.69 Aligned_cols=97 Identities=13% Similarity=0.129 Sum_probs=72.4
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHc----CCeEEEEeCChhHHHHHHHHcCCCeEee
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAF----GHHVTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~----G~~V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
..+||+....+..|+..+--- .|++++|+|- ..+|.=+..++... +++|++..+....+.
T Consensus 135 ~~~PcTp~av~~lL~~~~i~l--~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~------------- 199 (293)
T PRK14185 135 CFVSATPNGILELLKRYHIET--SGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLK------------- 199 (293)
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCHH-------------
Confidence 356777777777777665322 7999999999 99999888888877 688888764432221
Q ss_pred CccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 236 STNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 236 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+.+|+++-++|....+. -+++++|..++++|...
T Consensus 200 --------~~~~~ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin~ 236 (293)
T PRK14185 200 --------KECLEADIIIAALGQPEFVK--ADMVKEGAVVIDVGTTR 236 (293)
T ss_pred --------HHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEecCcc
Confidence 12356899999999876543 38999999999999754
No 424
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.72 E-value=0.061 Score=47.83 Aligned_cols=97 Identities=13% Similarity=0.148 Sum_probs=72.9
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+....+..++..+--- .|++++|+|- ..+|.=+..++...|++|++..+....+
T Consensus 137 ~~~PcTp~av~~lL~~y~i~l--~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L------------------ 196 (288)
T PRK14171 137 GFIPCTALGCLAVIKKYEPNL--TGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNL------------------ 196 (288)
T ss_pred CCcCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCH------------------
Confidence 356777777777777665323 7999999999 9999999999999999999877443221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+..+.+|+++-++|....+. -+++++|..++++|...
T Consensus 197 ---~~~~~~ADIvV~AvGkp~~i~--~~~vk~GavVIDvGin~ 234 (288)
T PRK14171 197 ---SSITSKADIVVAAIGSPLKLT--AEYFNPESIVIDVGINR 234 (288)
T ss_pred ---HHHHhhCCEEEEccCCCCccC--HHHcCCCCEEEEeeccc
Confidence 122356899999999775333 37899999999999654
No 425
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.065 Score=48.14 Aligned_cols=75 Identities=16% Similarity=0.137 Sum_probs=49.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh---------hHHHHHHHH---cCCCeE---eeCccHHHHHh---
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP---------SKEKEAKEL---LGADEF---ILSTNAMQMQA--- 244 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~---------~~~~~~~~~---~g~~~~---v~~~~~~~~~~--- 244 (360)
.++++||+|+ +++|.++++.+...|++|++++++. ++.+.+.+. .|.... .|-.+.+....
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 84 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD 84 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence 6889999999 9999999988888999999988654 443333322 232211 23333322211
Q ss_pred ----cCCCcCEEEEcCCC
Q 018158 245 ----GKRTLDFILDTVSA 258 (360)
Q Consensus 245 ----~~~~~d~vid~~g~ 258 (360)
...++|++|++.|.
T Consensus 85 ~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 85 AAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHhcCCCCEEEECCCC
Confidence 13579999999874
No 426
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.68 E-value=0.12 Score=45.54 Aligned_cols=95 Identities=22% Similarity=0.267 Sum_probs=65.3
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC--
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA-- 258 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~-- 258 (360)
++++++||=+|+|. |..+..+++.. +.+|++++.+++..+.+++++....++..+-. .. .....+|+|+....-
T Consensus 29 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~~-~~-~~~~~fD~v~~~~~l~~ 105 (258)
T PRK01683 29 LENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEADIA-SW-QPPQALDLIFANASLQW 105 (258)
T ss_pred CcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECchh-cc-CCCCCccEEEEccChhh
Confidence 34789999999853 66677777776 56899999999988888875542233322211 11 123579999865441
Q ss_pred ----cccHHHHHHHhccCCEEEEeC
Q 018158 259 ----KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 259 ----~~~~~~~~~~l~~~G~~v~~g 279 (360)
...+..+.+.|++||.++...
T Consensus 106 ~~d~~~~l~~~~~~LkpgG~~~~~~ 130 (258)
T PRK01683 106 LPDHLELFPRLVSLLAPGGVLAVQM 130 (258)
T ss_pred CCCHHHHHHHHHHhcCCCcEEEEEC
Confidence 234788999999999998753
No 427
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.67 E-value=0.066 Score=47.04 Aligned_cols=75 Identities=15% Similarity=0.122 Sum_probs=49.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHH---cCCCe-E--eeCccHHHHHh-------cCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKEL---LGADE-F--ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~---~g~~~-~--v~~~~~~~~~~-------~~~~ 248 (360)
.++++||+|+ +++|.++++.+...|++|++++++.+ ..+.+.+. .+... . .|-.+.+.... ...+
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999 99999999999999999999998653 22222221 34221 1 23333322221 1356
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|++.|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 428
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=95.66 E-value=0.064 Score=52.57 Aligned_cols=94 Identities=17% Similarity=0.110 Sum_probs=61.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS-- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~-- 261 (360)
.+++++|+|+|++|.+++..+...|++|+++.++.++.+.+.+.++.. .+...+.. .......|++++|++....
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~~~~~--~~~~~~~diiINtT~vGm~~~ 454 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTLADLE--NFHPEEGMILANTTSVGMQPN 454 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeHhHhh--hhccccCeEEEecccCCCCCC
Confidence 468999999999999999999999999999999988887777656532 22222111 1112357899998864311
Q ss_pred ---HHHHHHHhccCCEEEEeCC
Q 018158 262 ---LGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 262 ---~~~~~~~l~~~G~~v~~g~ 280 (360)
..--...+++.+.+.++-.
T Consensus 455 ~~~~pl~~~~l~~~~~v~D~vY 476 (529)
T PLN02520 455 VDETPISKHALKHYSLVFDAVY 476 (529)
T ss_pred CCCCcccHhhCCCCCEEEEecc
Confidence 0111244555555555533
No 429
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=95.65 E-value=0.054 Score=50.17 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=50.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC--C--C-eEeeCccHHHHHhc--CCCcCEEEEc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG--A--D-EFILSTNAMQMQAG--KRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g--~--~-~~v~~~~~~~~~~~--~~~~d~vid~ 255 (360)
.++++||+|+ |.+|..+++.+...|.+|++++++..........++ . . ...|-.+.+..... ..++|+||.+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 4789999999 999999999999999999999987654332221122 1 1 11233343333333 2368999999
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
++.
T Consensus 83 A~~ 85 (349)
T TIGR02622 83 AAQ 85 (349)
T ss_pred Ccc
Confidence 873
No 430
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.65 E-value=0.076 Score=46.39 Aligned_cols=42 Identities=19% Similarity=0.242 Sum_probs=36.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHH
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAK 225 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~ 225 (360)
++++++|+|+ |.+|...++.+...|++|++++++.++.+.+.
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~ 53 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVY 53 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Confidence 7899999999 99999988888888999999999987655443
No 431
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.65 E-value=0.1 Score=42.41 Aligned_cols=73 Identities=21% Similarity=0.218 Sum_probs=47.0
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCC-eEEEEeCC--hhHHHHHHHH---cCCCeE---eeCccHHHHHh-------cCCC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGH-HVTVISTS--PSKEKEAKEL---LGADEF---ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~-~V~~~~~~--~~~~~~~~~~---~g~~~~---v~~~~~~~~~~-------~~~~ 248 (360)
+++||+|+ +++|...++.+-..|. +|+.+.++ .++.+.+.++ .+..-. .|..+.+..+. ....
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 57899999 9999988777777776 68888888 4544444332 342211 13333322222 2567
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999999884
No 432
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.65 E-value=0.073 Score=47.22 Aligned_cols=96 Identities=15% Similarity=0.136 Sum_probs=72.6
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
.+||+....+..++..+--- .|++++|+|- ..+|.=+..++...+++|++..+....+.
T Consensus 136 ~~PcTp~avi~ll~~~~i~l--~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~------------------ 195 (282)
T PRK14182 136 PRPCTPAGVMRMLDEARVDP--KGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLA------------------ 195 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH------------------
Confidence 46777777777777665322 7999999999 99999999999999999998865432211
Q ss_pred HHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+.+|+++-++|....+. -+++++|..++++|...
T Consensus 196 ---~~~~~ADIvI~AvGk~~~i~--~~~ik~gaiVIDvGin~ 232 (282)
T PRK14182 196 ---GEVGRADILVAAIGKAELVK--GAWVKEGAVVIDVGMNR 232 (282)
T ss_pred ---HHHhhCCEEEEecCCcCccC--HHHcCCCCEEEEeecee
Confidence 12356899999999765333 37899999999999754
No 433
>PRK07775 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.11 Score=46.23 Aligned_cols=75 Identities=13% Similarity=0.150 Sum_probs=51.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
+.++++|+|+ |.+|..+++.+...|++|++++++.++.+.+... .+.... .|..+.+..... ..++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4578999999 9999999988888899999999887765544332 233221 243333332211 2468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.+.|.
T Consensus 89 d~vi~~Ag~ 97 (274)
T PRK07775 89 EVLVSGAGD 97 (274)
T ss_pred CEEEECCCc
Confidence 999999874
No 434
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.64 E-value=0.24 Score=43.24 Aligned_cols=98 Identities=12% Similarity=0.118 Sum_probs=60.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-hhHHH----HHHHHcCCCe-E--eeCccHHHHHh-------cCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS-PSKEK----EAKELLGADE-F--ILSTNAMQMQA-------GKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~-~~~~~----~~~~~~g~~~-~--v~~~~~~~~~~-------~~~ 247 (360)
.++++||+|+ |.+|...++.+...|++|+++.++ .++.. .+++ .+... . .|..+.+.... .-.
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKE-NGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHH-cCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 4688999999 999999988888899998776643 23222 2222 33321 1 23333322211 135
Q ss_pred CcCEEEEcCCCcc-------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 248 TLDFILDTVSAKH-------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 248 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
++|++|.+.|... ..+.+...++..|+++.++...
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 143 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVA 143 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchh
Confidence 7899999998410 1234455666778999887654
No 435
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=95.64 E-value=0.065 Score=48.71 Aligned_cols=97 Identities=12% Similarity=0.090 Sum_probs=73.7
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+.......|++.+.-- .|++++|+|- ..+|.=+..++...|++|++..+....+
T Consensus 192 ~~~PCTp~avi~LL~~~~i~l--~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl------------------ 251 (345)
T PLN02897 192 LFVSCTPKGCVELLIRSGVEI--AGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDP------------------ 251 (345)
T ss_pred CCcCCCHHHHHHHHHHhCCCC--CCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCH------------------
Confidence 456777777777777665323 7999999999 9999999999999999998887543221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+..|+++-++|....+. -+++++|..++++|...
T Consensus 252 ---~~~~~~ADIvIsAvGkp~~v~--~d~vk~GavVIDVGin~ 289 (345)
T PLN02897 252 ---EQITRKADIVIAAAGIPNLVR--GSWLKPGAVVIDVGTTP 289 (345)
T ss_pred ---HHHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEccccc
Confidence 122457899999999875433 47899999999999754
No 436
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=95.64 E-value=0.068 Score=43.05 Aligned_cols=87 Identities=22% Similarity=0.221 Sum_probs=56.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH-- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~-- 260 (360)
++++|.|+|.|..|.+.++-+|..|.+|++..+... ..+.+++ -|.+. . ...+.-+..|+|+-.+.+..
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~-~Gf~v-~------~~~eAv~~aDvV~~L~PD~~q~ 74 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKA-DGFEV-M------SVAEAVKKADVVMLLLPDEVQP 74 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHH-TT-EC-C------EHHHHHHC-SEEEE-S-HHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHH-CCCee-c------cHHHHHhhCCEEEEeCChHHHH
Confidence 589999999999999999999999999998888777 6777777 77431 1 12233457999999887652
Q ss_pred -cH-HHHHHHhccCCEEEEe
Q 018158 261 -SL-GPILELLKVNGTLSVV 278 (360)
Q Consensus 261 -~~-~~~~~~l~~~G~~v~~ 278 (360)
.+ +++...|+++-.+++.
T Consensus 75 ~vy~~~I~p~l~~G~~L~fa 94 (165)
T PF07991_consen 75 EVYEEEIAPNLKPGATLVFA 94 (165)
T ss_dssp HHHHHHHHHHS-TT-EEEES
T ss_pred HHHHHHHHhhCCCCCEEEeC
Confidence 23 4455677777666544
No 437
>PRK14982 acyl-ACP reductase; Provisional
Probab=95.62 E-value=0.068 Score=48.93 Aligned_cols=93 Identities=18% Similarity=0.289 Sum_probs=65.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHH-cCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKA-FGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH 260 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~-~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~ 260 (360)
.+++++|+|+ |.+|..+++.+.. .|. +++++.++.+++..+...++...+. .....-.+.|+|+.+++...
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l~~aDiVv~~ts~~~ 227 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEALPEADIVVWVASMPK 227 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHHccCCEEEECCcCCc
Confidence 6789999999 9999988887764 465 7999999988887776655422221 12233457999999998754
Q ss_pred cHHHHHHHhccCCEEEEeCCCC
Q 018158 261 SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 261 ~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+..-...+++.-.+++++.+.
T Consensus 228 ~~~I~~~~l~~~~~viDiAvPR 249 (340)
T PRK14982 228 GVEIDPETLKKPCLMIDGGYPK 249 (340)
T ss_pred CCcCCHHHhCCCeEEEEecCCC
Confidence 3211224567777888888765
No 438
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=95.62 E-value=0.056 Score=48.91 Aligned_cols=91 Identities=22% Similarity=0.280 Sum_probs=68.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL- 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~- 262 (360)
+|+.++|.|-|-+|.-.++.++.+|++|+++.-++-+.-++.- =|. .+. ...++....|+++-|+|+...+
T Consensus 208 aGK~vVV~GYG~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~M-dGf-~V~------~m~~Aa~~gDifiT~TGnkdVi~ 279 (420)
T COG0499 208 AGKNVVVAGYGWVGRGIAMRLRGMGARVIVTEVDPIRALEAAM-DGF-RVM------TMEEAAKTGDIFVTATGNKDVIR 279 (420)
T ss_pred cCceEEEecccccchHHHHHhhcCCCeEEEEecCchHHHHHhh-cCc-EEE------EhHHhhhcCCEEEEccCCcCccC
Confidence 8999999999999999999999999999999988865433322 232 222 1223345569999999987654
Q ss_pred HHHHHHhccCCEEEEeCCCC
Q 018158 263 GPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~ 282 (360)
..-+..|+++..+...|-..
T Consensus 280 ~eh~~~MkDgaIl~N~GHFd 299 (420)
T COG0499 280 KEHFEKMKDGAILANAGHFD 299 (420)
T ss_pred HHHHHhccCCeEEecccccc
Confidence 46678899998888888544
No 439
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.62 E-value=0.13 Score=44.43 Aligned_cols=69 Identities=19% Similarity=0.211 Sum_probs=47.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEeeCccHHHHHhc------CCCcCEEEEc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFILSTNAMQMQAG------KRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~------~~~~d~vid~ 255 (360)
.+++++|+|+ |.+|..+++.+...|++|++++++.++ . +..+ ...|..+.+..... ..+.|++|.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----D-FPGELFACDLADIEQTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----c-cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence 4678999999 999999999999999999999987654 1 2211 22344443322211 2368999998
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
.|.
T Consensus 76 ag~ 78 (234)
T PRK07577 76 VGI 78 (234)
T ss_pred CCC
Confidence 874
No 440
>PLN02244 tocopherol O-methyltransferase
Probab=95.61 E-value=0.092 Score=48.49 Aligned_cols=96 Identities=21% Similarity=0.306 Sum_probs=63.3
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC-eE-eeCccHHHHHhcCCCcCEEEEcCC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD-EF-ILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~~-v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
+++++||=+|+|. |..+..+++..|++|++++.++...+.++++ .|.. .+ +...+.....-....+|+|+....
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~~~~~~FD~V~s~~~ 195 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQPFEDGQFDLVWSMES 195 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCCCCCCCccEEEECCc
Confidence 3788999999864 6677788887899999999999877766553 2321 11 111111111112457999986433
Q ss_pred C------cccHHHHHHHhccCCEEEEeC
Q 018158 258 A------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 258 ~------~~~~~~~~~~l~~~G~~v~~g 279 (360)
. ...+.++.+.|++||+++...
T Consensus 196 ~~h~~d~~~~l~e~~rvLkpGG~lvi~~ 223 (340)
T PLN02244 196 GEHMPDKRKFVQELARVAAPGGRIIIVT 223 (340)
T ss_pred hhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 1 134678899999999998764
No 441
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.61 E-value=0.071 Score=47.68 Aligned_cols=97 Identities=14% Similarity=0.120 Sum_probs=71.8
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHc----CCeEEEEeCChhHHHHHHHHcCCCeEee
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAF----GHHVTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~----G~~V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
...||+..+.+..|+..+--- .|++++|+|. ..+|.=++.++... +++|++..+....+
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l--~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l-------------- 198 (297)
T PRK14167 135 RFKPCTPHGIQKLLAAAGVDT--EGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDL-------------- 198 (297)
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCH--------------
Confidence 356777777777777665323 7999999999 99999888888877 78898865433211
Q ss_pred CccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 236 STNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 236 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+.+|+++-++|....+.. +++++|..++++|...
T Consensus 199 -------~~~~~~ADIvIsAvGkp~~i~~--~~ik~gaiVIDvGin~ 236 (297)
T PRK14167 199 -------AAKTRRADIVVAAAGVPELIDG--SMLSEGATVIDVGINR 236 (297)
T ss_pred -------HHHHhhCCEEEEccCCcCccCH--HHcCCCCEEEEccccc
Confidence 1123578999999998764432 7899999999999654
No 442
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=95.60 E-value=0.052 Score=49.60 Aligned_cols=74 Identities=20% Similarity=0.219 Sum_probs=49.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CC--C-eEe--eCccHHHHHhcCCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GA--D-EFI--LSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~--~-~~v--~~~~~~~~~~~~~~~d~vid 254 (360)
.|++++|+|+ |.+|..++..+...|.+|+++.++.++.+.+...+ +. . ..+ |..+...+...-.++|+||.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 6789999999 99999999988888999998888765443332211 11 1 111 33333333444457999999
Q ss_pred cCC
Q 018158 255 TVS 257 (360)
Q Consensus 255 ~~g 257 (360)
+++
T Consensus 84 ~A~ 86 (322)
T PLN02986 84 TAS 86 (322)
T ss_pred eCC
Confidence 886
No 443
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.59 E-value=0.074 Score=46.82 Aligned_cols=74 Identities=15% Similarity=0.086 Sum_probs=50.1
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH----cCCCeE----eeCccHHHHHhc-------CCC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL----LGADEF----ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~----~g~~~~----v~~~~~~~~~~~-------~~~ 248 (360)
++++||+|+ |.+|..++..+...|++|++++++.++.+.+.+. .+...+ .|..+.+..... -.+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999 9999999998888899999999987765544332 231111 133333222211 257
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++++.|.
T Consensus 82 id~vv~~ag~ 91 (259)
T PRK12384 82 VDLLVYNAGI 91 (259)
T ss_pred CCEEEECCCc
Confidence 8999999873
No 444
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=95.59 E-value=0.068 Score=48.82 Aligned_cols=97 Identities=15% Similarity=0.145 Sum_probs=73.5
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+.......|+..+.-- .|++++|+|- ..+|.=+..++...+++|++.......+.
T Consensus 209 ~f~PCTp~avielL~~y~i~l--~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~----------------- 269 (364)
T PLN02616 209 LFVPCTPKGCIELLHRYNVEI--KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPE----------------- 269 (364)
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHH-----------------
Confidence 356777777777776665322 7999999999 99999999999999999999875432211
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+..+.+|+++-++|....+. -+++++|..++++|...
T Consensus 270 ----~~~r~ADIVIsAvGkp~~i~--~d~vK~GAvVIDVGIn~ 306 (364)
T PLN02616 270 ----EITREADIIISAVGQPNMVR--GSWIKPGAVVIDVGINP 306 (364)
T ss_pred ----HHHhhCCEEEEcCCCcCcCC--HHHcCCCCEEEeccccc
Confidence 22357899999999875433 37899999999999754
No 445
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.59 E-value=0.076 Score=44.21 Aligned_cols=117 Identities=13% Similarity=0.010 Sum_probs=76.5
Q ss_pred ccccchhhhhhchhhccCCC--------CCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC
Q 018158 161 APLLCAGITVFCPMKDNNLI--------DSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD 231 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~--------~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~ 231 (360)
..+||+....+..|+..+.. . -.|++++|+|- ..+|.=++.++...|++|++.+.+.... ...-+..
T Consensus 31 ~~~PCTp~avi~lL~~~~i~~~~~~~~~~-l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~---~~~~~~~ 106 (197)
T cd01079 31 SILPCTPLAIVKILEFLGIYNKILPYGNR-LYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV---FTRGESI 106 (197)
T ss_pred CccCCCHHHHHHHHHHhCCcccccccCCC-CCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc---ccccccc
Confidence 45677777777777665320 1 27999999999 9999999999999999999886443211 0101100
Q ss_pred -eEee-Ccc-HHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 232 -EFIL-STN-AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 232 -~~v~-~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+--- ..+ .....+.-+.+|+++-++|.... .---+++++|..++++|...
T Consensus 107 ~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~-~i~~d~ik~GavVIDVGi~~ 159 (197)
T cd01079 107 RHEKHHVTDEEAMTLDCLSQSDVVITGVPSPNY-KVPTELLKDGAICINFASIK 159 (197)
T ss_pred ccccccccchhhHHHHHhhhCCEEEEccCCCCC-ccCHHHcCCCcEEEEcCCCc
Confidence 0000 001 11133446789999999998754 12247899999999999754
No 446
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=95.58 E-value=0.058 Score=48.29 Aligned_cols=94 Identities=14% Similarity=0.125 Sum_probs=68.7
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe-eCccHHHHHhcCCCcCEEEEcCCCcc--
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI-LSTNAMQMQAGKRTLDFILDTVSAKH-- 260 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~~~~d~vid~~g~~~-- 260 (360)
...++|+|+ |-.|-+.+..+++.|.+.....||..+++.+...+|.+..+ .-..++...+...++++|++|+|-..
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt~~ 85 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPYTRY 85 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEecccccccc
Confidence 345788999 99999999999999999888999999999999989954332 22224455666789999999998321
Q ss_pred cHHHHHHHhccCCEEEEe
Q 018158 261 SLGPILELLKVNGTLSVV 278 (360)
Q Consensus 261 ~~~~~~~~l~~~G~~v~~ 278 (360)
....+-.|++.|-.++++
T Consensus 86 g~plv~aC~~~GTdY~Di 103 (382)
T COG3268 86 GEPLVAACAAAGTDYADI 103 (382)
T ss_pred ccHHHHHHHHhCCCeeec
Confidence 123444455555455544
No 447
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.07 Score=46.94 Aligned_cols=75 Identities=17% Similarity=0.162 Sum_probs=50.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH--cCCCe---EeeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL--LGADE---FILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~--~g~~~---~v~~~~~~~~~~~-------~~~~d 250 (360)
.++++||+|+ |++|...++.+...|++|+++++++++.+...+. .+... ..|..+.+..... ..++|
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 5789999999 9999999888888999999999888765333220 23221 1233333222111 24799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|.+.|.
T Consensus 86 ~vi~~ag~ 93 (258)
T PRK08628 86 GLVNNAGV 93 (258)
T ss_pred EEEECCcc
Confidence 99999983
No 448
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.57 E-value=0.12 Score=50.31 Aligned_cols=70 Identities=20% Similarity=0.238 Sum_probs=49.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh-H----HHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS-K----EKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~-~----~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
.+++++|+|+|.+|+.++.+++..|++|+++++++. . .+.+++ .|....... ... ....+|+|+-+.|.
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~-~gv~~~~~~-~~~----~~~~~D~Vv~s~Gi 88 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA-LGATVRLGP-GPT----LPEDTDLVVTSPGW 88 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH-cCCEEEECC-Ccc----ccCCCCEEEECCCc
Confidence 577899999999999999999999999999986542 1 233444 665433322 111 23568999988885
Q ss_pred c
Q 018158 259 K 259 (360)
Q Consensus 259 ~ 259 (360)
.
T Consensus 89 ~ 89 (480)
T PRK01438 89 R 89 (480)
T ss_pred C
Confidence 4
No 449
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.57 E-value=0.085 Score=46.90 Aligned_cols=96 Identities=18% Similarity=0.218 Sum_probs=71.8
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHH--cCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKA--FGHHVTVISTSPSKEKEAKELLGADEFILSTN 238 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~--~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 238 (360)
.+||+..+.+..++..+--- .|++++|+|. ..+|.=++.++.. .+++|++..+....+
T Consensus 137 ~~PcTp~av~~ll~~~~i~l--~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l----------------- 197 (284)
T PRK14193 137 PLPCTPRGIVHLLRRYDVEL--AGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDL----------------- 197 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCH-----------------
Confidence 46777777777777665322 6999999999 9999988888877 789998887543211
Q ss_pred HHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 239 AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 239 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+..|+++-++|....+. -+++++|..++++|...
T Consensus 198 ----~~~~k~ADIvV~AvGkp~~i~--~~~ik~GavVIDvGin~ 235 (284)
T PRK14193 198 ----AAHTRRADIIVAAAGVAHLVT--ADMVKPGAAVLDVGVSR 235 (284)
T ss_pred ----HHHHHhCCEEEEecCCcCccC--HHHcCCCCEEEEccccc
Confidence 122356899999999875433 47899999999999764
No 450
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=95.56 E-value=0.038 Score=40.00 Aligned_cols=86 Identities=23% Similarity=0.328 Sum_probs=56.1
Q ss_pred EcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCCc------ccHH
Q 018158 191 VGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVSAK------HSLG 263 (360)
Q Consensus 191 ~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~~------~~~~ 263 (360)
+|+| .|..+..+++..+.+|++++.+++.++.++++.....+ +...+.....-....+|+|+....-. ..+.
T Consensus 3 iG~G-~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~sfD~v~~~~~~~~~~~~~~~l~ 81 (95)
T PF08241_consen 3 IGCG-TGRFAAALAKRGGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAEDLPFPDNSFDVVFSNSVLHHLEDPEAALR 81 (95)
T ss_dssp ET-T-TSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTSSSS-TT-EEEEEEESHGGGSSHHHHHHH
T ss_pred ecCc-CCHHHHHHHhccCCEEEEEeCCHHHHHHHHhcccccCchheeehHHhCccccccccccccccceeeccCHHHHHH
Confidence 4555 58888888888677999999999999999886543221 21222222222256799998755321 3468
Q ss_pred HHHHHhccCCEEEE
Q 018158 264 PILELLKVNGTLSV 277 (360)
Q Consensus 264 ~~~~~l~~~G~~v~ 277 (360)
++.+.|+++|+++.
T Consensus 82 e~~rvLk~gG~l~~ 95 (95)
T PF08241_consen 82 EIYRVLKPGGRLVI 95 (95)
T ss_dssp HHHHHEEEEEEEEE
T ss_pred HHHHHcCcCeEEeC
Confidence 99999999999864
No 451
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.56 E-value=0.072 Score=46.62 Aligned_cols=74 Identities=19% Similarity=0.192 Sum_probs=51.3
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe---EeeCccHHHH-------HhcCCCcC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE---FILSTNAMQM-------QAGKRTLD 250 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~-------~~~~~~~d 250 (360)
++++||+|+ |.+|...+..+...|++|++++++.++.+.+.+.+ +... ..|..+.+.. .+...+.|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 357999999 99999999888888999999999987766655422 2211 1244444322 22245689
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|.+.+.
T Consensus 81 ~vi~~a~~ 88 (255)
T TIGR01963 81 ILVNNAGI 88 (255)
T ss_pred EEEECCCC
Confidence 99988864
No 452
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=95.56 E-value=0.2 Score=41.97 Aligned_cols=94 Identities=21% Similarity=0.278 Sum_probs=60.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHH-cCCeEEEEeCChhHHHHHHHH---cCCCeE-eeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKA-FGHHVTVISTSPSKEKEAKEL---LGADEF-ILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~-~G~~V~~~~~~~~~~~~~~~~---~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
++.++|-+|+|. |..++.+++. .+++|++++.+++..+.+++. .+.+.+ +...+...... ...+|+|+.....
T Consensus 45 ~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~-~~~fDlV~~~~~~ 122 (187)
T PRK00107 45 GGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ-EEKFDVVTSRAVA 122 (187)
T ss_pred CCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC-CCCccEEEEcccc
Confidence 688999998853 5555555554 467999999998876655543 444322 11111112222 4579999964322
Q ss_pred --cccHHHHHHHhccCCEEEEeC
Q 018158 259 --KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 259 --~~~~~~~~~~l~~~G~~v~~g 279 (360)
...+..+.+.++++|+++.+-
T Consensus 123 ~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 123 SLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred CHHHHHHHHHHhcCCCeEEEEEe
Confidence 235678889999999998773
No 453
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.55 E-value=0.1 Score=45.79 Aligned_cols=74 Identities=22% Similarity=0.194 Sum_probs=49.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHcCCCeE-eeCccHHHHHhc-------CCCcCEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKELLGADEF-ILSTNAMQMQAG-------KRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~~-v~~~~~~~~~~~-------~~~~d~vi 253 (360)
.+++++|+|+ |++|...++.+...|++|+++.++.+ ..+.++. .+...+ .|-.+.+..... ..++|++|
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE-KGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh-CCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 5789999999 99999999998889999988765443 3344443 332211 244443332221 35799999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
.+.|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06463 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 99874
No 454
>PRK08264 short chain dehydrogenase; Validated
Probab=95.54 E-value=0.063 Score=46.56 Aligned_cols=71 Identities=18% Similarity=0.251 Sum_probs=50.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCC-eE--eeCccHHHHHhc---CCCcCEEEEc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGAD-EF--ILSTNAMQMQAG---KRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~-~~--v~~~~~~~~~~~---~~~~d~vid~ 255 (360)
.+++++|+|+ |.+|..+++.+...|+ +|++++++.++.+. .+.. .. .|-.+.+..... ...+|++|.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 5688999999 9999999999999999 99999998776543 3321 11 233343333222 3468999999
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
.|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 886
No 455
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.50 E-value=0.16 Score=45.24 Aligned_cols=74 Identities=18% Similarity=0.202 Sum_probs=52.8
Q ss_pred CCcEEEEEcC-ChHHHH-HHHHHHHcCCeEEEEeCChhHHHHHHHHc----CC---CeEeeCccHHH----HHhc--CCC
Q 018158 184 AKKRIGIVGL-GGLGHV-AVKFGKAFGHHVTVISTSPSKEKEAKELL----GA---DEFILSTNAMQ----MQAG--KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~-aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~---~~~v~~~~~~~----~~~~--~~~ 248 (360)
.|++.+|.|+ .++|.+ +-+||+ .|.+|+.+.|+.+|++..++.. +. ..++|..+.+. .... +-.
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 5799999999 999986 666776 8999999999999998887653 32 13356555532 2222 445
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+-+.+|++|.
T Consensus 127 VgILVNNvG~ 136 (312)
T KOG1014|consen 127 VGILVNNVGM 136 (312)
T ss_pred eEEEEecccc
Confidence 6677888883
No 456
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.50 E-value=0.093 Score=46.67 Aligned_cols=97 Identities=14% Similarity=0.175 Sum_probs=72.1
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHc----CCeEEEEeCChhHHHHHHHHcCCCeEee
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAF----GHHVTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~----G~~V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
..+||+....+..|+..+--- .|++++|+|- ..+|.=+..++... +++|++..+....+.
T Consensus 131 ~~~PcTp~avi~lL~~~~i~l--~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~------------- 195 (287)
T PRK14181 131 GFIPCTPAGIIELLKYYEIPL--HGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLT------------- 195 (287)
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHH-------------
Confidence 467787777777777665333 6999999999 99999888888887 788887764332111
Q ss_pred CccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 236 STNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 236 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+..+..|+++-++|....+. -+++++|..++++|...
T Consensus 196 --------~~~~~ADIvV~AvG~p~~i~--~~~ik~GavVIDvGin~ 232 (287)
T PRK14181 196 --------EILKTADIIIAAIGVPLFIK--EEMIAEKAVIVDVGTSR 232 (287)
T ss_pred --------HHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEecccc
Confidence 12356899999999875433 47899999999999754
No 457
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=95.49 E-value=0.074 Score=47.94 Aligned_cols=85 Identities=22% Similarity=0.248 Sum_probs=58.0
Q ss_pred EEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHH--
Q 018158 188 IGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI-- 265 (360)
Q Consensus 188 vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~-- 265 (360)
|.|+|.|.+|...+..+...|.+|++.++++++.+.+.+ .|.... .+. .+.-...|+||.|+.........
T Consensus 2 IgvIG~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~---~~~---~~~~~~aDivi~~vp~~~~~~~v~~ 74 (291)
T TIGR01505 2 VGFIGLGIMGSPMSINLAKAGYQLHVTTIGPEVADELLA-AGAVTA---ETA---RQVTEQADVIFTMVPDSPQVEEVAF 74 (291)
T ss_pred EEEEEecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-CCCccc---CCH---HHHHhcCCEEEEecCCHHHHHHHHc
Confidence 678899999998888888889999999999999888877 665322 111 12235688999888765333332
Q ss_pred -----HHHhccCCEEEEeC
Q 018158 266 -----LELLKVNGTLSVVG 279 (360)
Q Consensus 266 -----~~~l~~~G~~v~~g 279 (360)
...++++..+++.+
T Consensus 75 ~~~~~~~~~~~g~iivd~s 93 (291)
T TIGR01505 75 GENGIIEGAKPGKTLVDMS 93 (291)
T ss_pred CcchHhhcCCCCCEEEECC
Confidence 23345555555554
No 458
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.49 E-value=0.16 Score=43.97 Aligned_cols=99 Identities=21% Similarity=0.258 Sum_probs=67.5
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHc---CCCeEeeCccHHHHH-hcCCCcCEEE-E
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELL---GADEFILSTNAMQMQ-AGKRTLDFIL-D 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~-~~~~~~d~vi-d 254 (360)
+.||++|+=.|.| .|.+++-||+..|- +|+..+..++..+.|++++ |....+.....+... .....+|++| |
T Consensus 92 i~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~vDav~LD 170 (256)
T COG2519 92 ISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEEDVDAVFLD 170 (256)
T ss_pred CCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEeccccccccccccCEEEEc
Confidence 5599998887775 38888889988875 7999999999887776653 433222111111111 1145899987 4
Q ss_pred cCCCcccHHHHHHHhccCCEEEEeCCC
Q 018158 255 TVSAKHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 255 ~~g~~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
----...++.+.+.|++||.++.+-..
T Consensus 171 mp~PW~~le~~~~~Lkpgg~~~~y~P~ 197 (256)
T COG2519 171 LPDPWNVLEHVSDALKPGGVVVVYSPT 197 (256)
T ss_pred CCChHHHHHHHHHHhCCCcEEEEEcCC
Confidence 443345678999999999999988544
No 459
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.47 E-value=0.088 Score=46.26 Aligned_cols=74 Identities=15% Similarity=0.108 Sum_probs=48.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh--HHHHHHHHcCCCeE---eeCccHHHHHh-------cCCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS--KEKEAKELLGADEF---ILSTNAMQMQA-------GKRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~--~~~~~~~~~g~~~~---v~~~~~~~~~~-------~~~~~d 250 (360)
.++++||+|+ |++|.++++.+...|++|+.++++.. ..+.+.+ .+.... .|-.+.+.... ...++|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTA-LGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 5789999999 99999999999999999998876432 2233333 442211 23333322211 135799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|++.|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99999974
No 460
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=95.47 E-value=0.064 Score=47.20 Aligned_cols=97 Identities=15% Similarity=0.170 Sum_probs=76.0
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+....+..+++.+.-- .|++++|+|. ..+|.=..+++...+++|++..+....+..
T Consensus 134 ~~~PCTp~gi~~ll~~~~i~l--~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~---------------- 195 (283)
T COG0190 134 GFLPCTPAGIMTLLEEYGIDL--RGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLAS---------------- 195 (283)
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHH----------------
Confidence 466888888888888777433 7999999999 899999999999999999998865422221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
..+..|+++-++|.+..+. -+++++|..++++|...
T Consensus 196 -----~~k~ADIvv~AvG~p~~i~--~d~vk~gavVIDVGinr 231 (283)
T COG0190 196 -----ITKNADIVVVAVGKPHFIK--ADMVKPGAVVIDVGINR 231 (283)
T ss_pred -----HhhhCCEEEEecCCccccc--cccccCCCEEEecCCcc
Confidence 2356899999999875444 37899999999999764
No 461
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.46 E-value=0.28 Score=42.50 Aligned_cols=75 Identities=16% Similarity=0.211 Sum_probs=48.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHH---cCCCeE-e--eCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK-EKEAKEL---LGADEF-I--LSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~-~~~~~~~---~g~~~~-v--~~~~~~~~~~~-------~~~ 248 (360)
.+++++|+|+ |.+|..++..+...|++|+++.++... .+..... .+.... + |..+.+..... ..+
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999999 999999999999999999887766542 2222211 232211 1 44443322221 247
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|.++.+.|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 462
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=95.46 E-value=0.2 Score=44.71 Aligned_cols=92 Identities=20% Similarity=0.285 Sum_probs=63.9
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCe---------EeeCccHHHHHhcCCCcCEEE-E
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADE---------FILSTNAMQMQAGKRTLDFIL-D 254 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~---------~v~~~~~~~~~~~~~~~d~vi-d 254 (360)
++|||+|.|. |-.+-.++|+... ++++++-+++=.+.+++.|+..+ ++..+....++....++|+|| |
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~~fDvIi~D 156 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEEKFDVIIVD 156 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCCcCCEEEEc
Confidence 6999998754 4556677777765 79999999998888888766322 222222234444456899997 5
Q ss_pred cCCC---------cccHHHHHHHhccCCEEEEe
Q 018158 255 TVSA---------KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 255 ~~g~---------~~~~~~~~~~l~~~G~~v~~ 278 (360)
++.. ..-++.+.++|+++|.++.-
T Consensus 157 ~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q 189 (282)
T COG0421 157 STDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ 189 (282)
T ss_pred CCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence 5543 23368899999999999876
No 463
>PRK06436 glycerate dehydrogenase; Provisional
Probab=95.46 E-value=0.1 Score=47.28 Aligned_cols=87 Identities=22% Similarity=0.343 Sum_probs=63.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.|+++.|+|.|.+|...+++++.+|++|++.+++... .+.... ..+ ..+.-...|+|+.+.....
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~-------~~~~~~--~~~---l~ell~~aDiv~~~lp~t~~T~ 188 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVN-------DGISSI--YME---PEDIMKKSDFVLISLPLTDETR 188 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcc-------cCcccc--cCC---HHHHHhhCCEEEECCCCCchhh
Confidence 6899999999999999999999999999999986321 222211 112 2334457899999887432
Q ss_pred --cHHHHHHHhccCCEEEEeCCCC
Q 018158 261 --SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 261 --~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.-...++.|+++..+++++.-.
T Consensus 189 ~li~~~~l~~mk~ga~lIN~sRG~ 212 (303)
T PRK06436 189 GMINSKMLSLFRKGLAIINVARAD 212 (303)
T ss_pred cCcCHHHHhcCCCCeEEEECCCcc
Confidence 1256789999999998887543
No 464
>PRK08655 prephenate dehydrogenase; Provisional
Probab=95.46 E-value=0.088 Score=50.34 Aligned_cols=88 Identities=26% Similarity=0.417 Sum_probs=58.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc---H
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS---L 262 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~---~ 262 (360)
++.|+|+ |.+|.+.+..++..|.+|+++++++++.......+|.. . ..+. .+.....|+||-|+..... +
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~-~--~~~~---~e~~~~aDvVIlavp~~~~~~vl 75 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVE-Y--ANDN---IDAAKDADIVIISVPINVTEDVI 75 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCe-e--ccCH---HHHhccCCEEEEecCHHHHHHHH
Confidence 5788985 99999999999999999999999987754433337752 1 1111 1223467888888875422 2
Q ss_pred HHHHHHhccCCEEEEeCC
Q 018158 263 GPILELLKVNGTLSVVGA 280 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~ 280 (360)
..+...++++..+++++.
T Consensus 76 ~~l~~~l~~~~iViDvsS 93 (437)
T PRK08655 76 KEVAPHVKEGSLLMDVTS 93 (437)
T ss_pred HHHHhhCCCCCEEEEccc
Confidence 333444556666777764
No 465
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=95.46 E-value=0.061 Score=43.64 Aligned_cols=88 Identities=19% Similarity=0.311 Sum_probs=59.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC-----CC-----eEeeCccHHHHHhcCCCcCEEEEcC
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG-----AD-----EFILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g-----~~-----~~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
+|.|+|+|..|.+++..+...|.+|+...++++..+.+++.-. .+ .+.-. ++..+.-++.|+++-++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t---~dl~~a~~~ad~Iiiav 77 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKAT---TDLEEALEDADIIIIAV 77 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEE---SSHHHHHTT-SEEEE-S
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccc---cCHHHHhCcccEEEecc
Confidence 4789999999999999999999999999999988887776311 11 11111 12233456899999999
Q ss_pred CCcccHHHHHHHhcc---CCEEEEe
Q 018158 257 SAKHSLGPILELLKV---NGTLSVV 278 (360)
Q Consensus 257 g~~~~~~~~~~~l~~---~G~~v~~ 278 (360)
.... +...++.+++ .+..+..
T Consensus 78 Ps~~-~~~~~~~l~~~l~~~~~ii~ 101 (157)
T PF01210_consen 78 PSQA-HREVLEQLAPYLKKGQIIIS 101 (157)
T ss_dssp -GGG-HHHHHHHHTTTSHTT-EEEE
T ss_pred cHHH-HHHHHHHHhhccCCCCEEEE
Confidence 8764 5777777766 3444444
No 466
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=95.46 E-value=0.079 Score=51.25 Aligned_cols=72 Identities=11% Similarity=0.212 Sum_probs=53.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~ 260 (360)
.+++++|+|+|++|.+++..+...|++|+++.++.++.+.+.+.++.. .+...+ ... -..+|++++|++...
T Consensus 331 ~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~-~~~~~~---~~~-l~~~DiVInatP~g~ 402 (477)
T PRK09310 331 NNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK-AFPLES---LPE-LHRIDIIINCLPPSV 402 (477)
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-eechhH---hcc-cCCCCEEEEcCCCCC
Confidence 578899999999999999999999999999999988877766645422 222111 111 247999999997654
No 467
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=95.45 E-value=0.02 Score=51.37 Aligned_cols=128 Identities=23% Similarity=0.256 Sum_probs=73.4
Q ss_pred ecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHH
Q 018158 144 DYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEK 222 (360)
Q Consensus 144 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~ 222 (360)
+.+.++.|.+++.+-... ...| ..+++.+... .++|++||=+|+|. |.+++..+|. |+ +|++++.++...+
T Consensus 127 ~~~~~I~idPg~AFGTG~----H~TT-~lcl~~l~~~-~~~g~~vLDvG~GS-GILaiaA~kl-GA~~v~a~DiDp~Av~ 198 (295)
T PF06325_consen 127 PDEIVIEIDPGMAFGTGH----HPTT-RLCLELLEKY-VKPGKRVLDVGCGS-GILAIAAAKL-GAKKVVAIDIDPLAVE 198 (295)
T ss_dssp TTSEEEEESTTSSS-SSH----CHHH-HHHHHHHHHH-SSTTSEEEEES-TT-SHHHHHHHHT-TBSEEEEEESSCHHHH
T ss_pred CCcEEEEECCCCcccCCC----CHHH-HHHHHHHHHh-ccCCCEEEEeCCcH-HHHHHHHHHc-CCCeEEEecCCHHHHH
Confidence 345577777777655432 1112 2223322222 34889999998853 6666665554 87 6999999988766
Q ss_pred HHHHH---cCC-CeEeeCccHHHHHhcCCCcCEEEEcCCCcc---cHHHHHHHhccCCEEEEeCCCC
Q 018158 223 EAKEL---LGA-DEFILSTNAMQMQAGKRTLDFILDTVSAKH---SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 223 ~~~~~---~g~-~~~v~~~~~~~~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+++. .|. +.+...... .....+||+|+-..-... ....+.+.++++|.++..|...
T Consensus 199 ~a~~N~~~N~~~~~~~v~~~~---~~~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~ 262 (295)
T PF06325_consen 199 AARENAELNGVEDRIEVSLSE---DLVEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILE 262 (295)
T ss_dssp HHHHHHHHTT-TTCEEESCTS---CTCCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEG
T ss_pred HHHHHHHHcCCCeeEEEEEec---ccccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccH
Confidence 66553 232 222111111 112378999996554331 2356677889999999998765
No 468
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.45 E-value=0.2 Score=43.80 Aligned_cols=69 Identities=13% Similarity=0.108 Sum_probs=47.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe---EeeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE---FILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |.+|...++.+...|++|++++++. ... .+... ..|-.+.+..... ..++|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LTQ-EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hhh-cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999 9999999998888999999999876 122 23211 1233333222221 3568999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|++.|.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 999874
No 469
>PRK05650 short chain dehydrogenase; Provisional
Probab=95.45 E-value=0.099 Score=46.40 Aligned_cols=72 Identities=22% Similarity=0.287 Sum_probs=49.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHh-------cCCCcCEE
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQA-------GKRTLDFI 252 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~-------~~~~~d~v 252 (360)
+++|+|+ |++|..+++.+...|++|++++++.++.+.+.+. .+.+.. .|-.+.+.... ...++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999 9999999888888899999999988776554332 232221 13333222211 13579999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|++.|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999884
No 470
>PRK06823 ornithine cyclodeaminase; Validated
Probab=95.44 E-value=0.15 Score=46.47 Aligned_cols=94 Identities=19% Similarity=0.224 Sum_probs=66.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc-CC-eEEEEeCChhHHHHHHHHc---CCCeEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF-GH-HVTVISTSPSKEKEAKELL---GADEFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~-G~-~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
..+++.|+|+|..+...++.+... .. +|.+.+++.++.+.+.+.+ +....+. +..++.-.+.|+|+-|++.
T Consensus 127 d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~----~~~~~av~~ADIV~taT~s 202 (315)
T PRK06823 127 HVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTT----LDAAEVAHAANLIVTTTPS 202 (315)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEE----CCHHHHhcCCCEEEEecCC
Confidence 567889999999998877766653 44 6999999999877655433 3322111 1223445789999998876
Q ss_pred cccHHHHHHHhccCCEEEEeCCCC
Q 018158 259 KHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 259 ~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+-. .+++++|-++..+|...
T Consensus 203 ~~P~~~-~~~l~~G~hi~~iGs~~ 225 (315)
T PRK06823 203 REPLLQ-AEDIQPGTHITAVGADS 225 (315)
T ss_pred CCceeC-HHHcCCCcEEEecCCCC
Confidence 654322 36899999999999765
No 471
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.44 E-value=0.15 Score=45.76 Aligned_cols=40 Identities=25% Similarity=0.423 Sum_probs=34.7
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHH
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAK 225 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~ 225 (360)
++|.|+|+|.+|.-.++.+...|.+|++.+++++.++.+.
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~ 45 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGVDVLVFETTEELATAGR 45 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 4788999999999888888888999999999999877643
No 472
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.43 E-value=0.093 Score=46.96 Aligned_cols=97 Identities=14% Similarity=0.146 Sum_probs=72.5
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHc----CCeEEEEeCChhHHHHHHHHcCCCeEee
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAF----GHHVTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~----G~~V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
..+||+.......|+..+.-- .|++++|+|. ..+|.-.+.++... +++|++..+....+
T Consensus 139 ~~~PcTp~avi~lL~~~~i~l--~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~l-------------- 202 (297)
T PRK14168 139 KFLPCTPAGIQEMLVRSGVET--SGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKNL-------------- 202 (297)
T ss_pred CCcCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcCH--------------
Confidence 457888777777777765433 7999999999 99999888888877 68898876433211
Q ss_pred CccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 236 STNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 236 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+..|+++-++|....+. -+++++|..++++|...
T Consensus 203 -------~~~~~~ADIvVsAvGkp~~i~--~~~ik~gavVIDvGin~ 240 (297)
T PRK14168 203 -------ARHCQRADILIVAAGVPNLVK--PEWIKPGATVIDVGVNR 240 (297)
T ss_pred -------HHHHhhCCEEEEecCCcCccC--HHHcCCCCEEEecCCCc
Confidence 122357899999999875433 47899999999999654
No 473
>PRK09135 pteridine reductase; Provisional
Probab=95.42 E-value=0.11 Score=45.15 Aligned_cols=75 Identities=15% Similarity=0.057 Sum_probs=49.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHc---CC-C---eEeeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP-SKEKEAKELL---GA-D---EFILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~-~~~~~~~~~~---g~-~---~~v~~~~~~~~~~~-------~~ 247 (360)
.++++||+|+ |.+|..+++.+...|++|++++++. ++.+.+.+.+ +. . ...|..+.+..... ..
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5688999999 9999998888888899999999863 3333332211 11 1 11244443333221 24
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++|.+.|.
T Consensus 85 ~~d~vi~~ag~ 95 (249)
T PRK09135 85 RLDALVNNASS 95 (249)
T ss_pred CCCEEEECCCC
Confidence 68999999873
No 474
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.41 E-value=0.23 Score=39.02 Aligned_cols=91 Identities=20% Similarity=0.249 Sum_probs=54.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCh-------------------hH----HHHHHHHcCCCeEeeCcc--
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSP-------------------SK----EKEAKELLGADEFILSTN-- 238 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~-------------------~~----~~~~~~~~g~~~~v~~~~-- 238 (360)
..+|+|+|+|++|..++..+-..|. ++++++.+. .| .+.+++..+..++.....
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 4689999999999999999988899 688888542 11 122233122222221111
Q ss_pred -HHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEE
Q 018158 239 -AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTL 275 (360)
Q Consensus 239 -~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~ 275 (360)
.......-+++|+||+|......-..+.+..+..+.-
T Consensus 82 ~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~p 119 (135)
T PF00899_consen 82 DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGIP 119 (135)
T ss_dssp SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT-E
T ss_pred ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCCC
Confidence 1222333468999999998765544555555555543
No 475
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=95.41 E-value=0.16 Score=46.05 Aligned_cols=38 Identities=29% Similarity=0.250 Sum_probs=31.8
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCChhHHH
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTSPSKEK 222 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~~~~~~ 222 (360)
.|+++||+|+ +++|.++++.+...|++|++ +++.++++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~ 48 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALN 48 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhh
Confidence 6899999999 89999999999999999988 55544443
No 476
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.41 E-value=0.015 Score=55.85 Aligned_cols=90 Identities=17% Similarity=0.114 Sum_probs=56.0
Q ss_pred CCCcEEE----EEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEeeCccHHHHHhcCCCcCEEEEcC
Q 018158 183 PAKKRIG----IVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 183 ~~~~~vl----I~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
++|+.+| |+|+ |++|.+++|+++..|++|+++.+.+.+....+. .+.+ .++|...........
T Consensus 32 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~l~---------- 100 (450)
T PRK08261 32 RPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWG-DRFGALVFDATGITDPADLK---------- 100 (450)
T ss_pred CCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcC-CcccEEEEECCCCCCHHHHH----------
Confidence 3888887 8877 999999999999999999998866553222111 2222 233332221111100
Q ss_pred CCcccHHHHHHHhccCCEEEEeCCCCC
Q 018158 257 SAKHSLGPILELLKVNGTLSVVGAPEA 283 (360)
Q Consensus 257 g~~~~~~~~~~~l~~~G~~v~~g~~~~ 283 (360)
+-...+...++.|.++|+++.++....
T Consensus 101 ~~~~~~~~~l~~l~~~griv~i~s~~~ 127 (450)
T PRK08261 101 ALYEFFHPVLRSLAPCGRVVVLGRPPE 127 (450)
T ss_pred HHHHHHHHHHHhccCCCEEEEEccccc
Confidence 001234667788889999999987653
No 477
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.40 E-value=0.073 Score=48.99 Aligned_cols=35 Identities=26% Similarity=0.305 Sum_probs=30.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~ 218 (360)
.+.+|+|+|+|++|..++..+-..|. ++++++++.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 45789999999999999999999998 788888763
No 478
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=95.40 E-value=0.22 Score=45.08 Aligned_cols=89 Identities=17% Similarity=0.190 Sum_probs=57.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHH--
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGP-- 264 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~-- 264 (360)
+|-|+|.|.+|...+..+...|.+|++.++++++.+.+.+ .|.... .+.....+.....|+|+-++... ....
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~-~g~~~~---~s~~~~~~~~~~~dvIi~~vp~~-~~~~v~ 76 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKE-DRTTGV---ANLRELSQRLSAPRVVWVMVPHG-IVDAVL 76 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCccc---CCHHHHHhhcCCCCEEEEEcCch-HHHHHH
Confidence 4788999999998888888889999999999999888887 664322 12212222224567777777654 2333
Q ss_pred --HHHHhccCCEEEEeCC
Q 018158 265 --ILELLKVNGTLSVVGA 280 (360)
Q Consensus 265 --~~~~l~~~G~~v~~g~ 280 (360)
+...++++-.+++.+.
T Consensus 77 ~~l~~~l~~g~ivid~st 94 (298)
T TIGR00872 77 EELAPTLEKGDIVIDGGN 94 (298)
T ss_pred HHHHhhCCCCCEEEECCC
Confidence 3333445545555543
No 479
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.078 Score=46.49 Aligned_cols=70 Identities=17% Similarity=0.147 Sum_probs=48.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC---eEeeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD---EFILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++ .. .+.. ...|..+.+..... ..++|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----TV-DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----hh-cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999 999999999998899999999988754 11 2221 11243443322221 3568999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|.+.|.
T Consensus 80 i~~ag~ 85 (252)
T PRK07856 80 VNNAGG 85 (252)
T ss_pred EECCCC
Confidence 999873
No 480
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=95.39 E-value=0.11 Score=46.82 Aligned_cols=87 Identities=21% Similarity=0.276 Sum_probs=59.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHH-
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI- 265 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~- 265 (360)
+|.|+|.|.+|...+..+...|.+|++.++++++.+.+.+ .|.... .+. .+.....|+||.|+.........
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-~g~~~~---~~~---~e~~~~~d~vi~~vp~~~~~~~v~ 76 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIA-AGAETA---STA---KAVAEQCDVIITMLPNSPHVKEVA 76 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-CCCeec---CCH---HHHHhcCCEEEEeCCCHHHHHHHH
Confidence 5889999999998888777889999999999988887777 664311 111 12234689999988755433333
Q ss_pred ------HHHhccCCEEEEeCC
Q 018158 266 ------LELLKVNGTLSVVGA 280 (360)
Q Consensus 266 ------~~~l~~~G~~v~~g~ 280 (360)
...++++..+++.+.
T Consensus 77 ~~~~~~~~~~~~g~iiid~st 97 (296)
T PRK11559 77 LGENGIIEGAKPGTVVIDMSS 97 (296)
T ss_pred cCcchHhhcCCCCcEEEECCC
Confidence 234455555665554
No 481
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.37 E-value=0.17 Score=43.22 Aligned_cols=94 Identities=23% Similarity=0.200 Sum_probs=60.4
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe--EeeCccHHHHHhcCCCcCEEEEcC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE--FILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~--~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
.+++++||-+|+|. |..+..+++.. .+|+.++.+++..+.+++++ |... ++........ .....+|+|+...
T Consensus 76 ~~~~~~VLeiG~Gs-G~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~I~~~~ 152 (212)
T PRK00312 76 LKPGDRVLEIGTGS-GYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGW-PAYAPFDRILVTA 152 (212)
T ss_pred CCCCCEEEEECCCc-cHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCC-CcCCCcCEEEEcc
Confidence 34889999998853 55555566553 48999999988777766643 4322 1211111111 1135799998765
Q ss_pred CCcccHHHHHHHhccCCEEEEe
Q 018158 257 SAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 257 g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
........+.+.|+++|+++..
T Consensus 153 ~~~~~~~~l~~~L~~gG~lv~~ 174 (212)
T PRK00312 153 AAPEIPRALLEQLKEGGILVAP 174 (212)
T ss_pred CchhhhHHHHHhcCCCcEEEEE
Confidence 5555567888999999998755
No 482
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.36 E-value=0.12 Score=45.67 Aligned_cols=75 Identities=15% Similarity=0.152 Sum_probs=50.0
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCh--hHHHHHHHHcCCC---eEeeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTSP--SKEKEAKELLGAD---EFILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~~--~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~ 248 (360)
.+++++|+|+ +++|.++++.+...|++|++++++. +..+.+.+.++.. ...|-.+.+..... ..+
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999985 7999999988888999999998653 3344444435421 11243333322211 357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++++.|.
T Consensus 86 iD~li~nAG~ 95 (256)
T PRK07889 86 LDGVVHSIGF 95 (256)
T ss_pred CcEEEEcccc
Confidence 9999998874
No 483
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.35 E-value=0.1 Score=46.09 Aligned_cols=74 Identities=15% Similarity=0.127 Sum_probs=48.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHH----cCCC-e--EeeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-SPSKEKEAKEL----LGAD-E--FILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-~~~~~~~~~~~----~g~~-~--~v~~~~~~~~~~~-------~~ 247 (360)
.++++||+|+ +++|.+++..+...|++|+++.+ +.++.+.+.+. .|.. . ..|-.+.+..... ..
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 5789999999 99999999988899999988864 44444333221 2322 1 1244443322211 35
Q ss_pred CcCEEEEcCC
Q 018158 248 TLDFILDTVS 257 (360)
Q Consensus 248 ~~d~vid~~g 257 (360)
++|+++++.|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 6899999885
No 484
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=95.34 E-value=0.081 Score=49.01 Aligned_cols=86 Identities=14% Similarity=0.143 Sum_probs=54.9
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH----HHHHHHHcCC------CeE-eeC
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK----EKEAKELLGA------DEF-ILS 236 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~----~~~~~~~~g~------~~~-v~~ 236 (360)
|||.-++....+ ++++|+|+|+ |-+|..++..+...|.+|+++++.... ...+....+. ..+ .|-
T Consensus 2 ~~~~~~~~~~~~---~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di 78 (348)
T PRK15181 2 TAYEELRTKLVL---APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI 78 (348)
T ss_pred chhhhhhhcccc---cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccC
Confidence 566666544422 5688999999 999999999999999999999875432 1111111111 111 233
Q ss_pred ccHHHHHhcCCCcCEEEEcCC
Q 018158 237 TNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 237 ~~~~~~~~~~~~~d~vid~~g 257 (360)
.+...+...-.++|+||.+++
T Consensus 79 ~d~~~l~~~~~~~d~ViHlAa 99 (348)
T PRK15181 79 RKFTDCQKACKNVDYVLHQAA 99 (348)
T ss_pred CCHHHHHHHhhCCCEEEECcc
Confidence 333344444457999999886
No 485
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=95.33 E-value=0.12 Score=47.55 Aligned_cols=86 Identities=19% Similarity=0.268 Sum_probs=61.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.|.++.|+|.|.+|...++.++..|.+|++.+++.+......+ .. ....+.-...|+|+.+.....
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~---------~~--~~l~ell~~aDiVil~lP~t~~t~ 213 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDFLT---------YK--DSVKEAIKDADIISLHVPANKESY 213 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhh---------cc--CCHHHHHhcCCEEEEeCCCcHHHH
Confidence 5789999999999999999999999999999988654221111 10 112334467899998887542
Q ss_pred --cHHHHHHHhccCCEEEEeCC
Q 018158 261 --SLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 261 --~~~~~~~~l~~~G~~v~~g~ 280 (360)
.....+..|+++..+++++.
T Consensus 214 ~li~~~~l~~mk~gavlIN~aR 235 (330)
T PRK12480 214 HLFDKAMFDHVKKGAILVNAAR 235 (330)
T ss_pred HHHhHHHHhcCCCCcEEEEcCC
Confidence 12466778888888888864
No 486
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.32 E-value=0.1 Score=46.21 Aligned_cols=75 Identities=23% Similarity=0.151 Sum_probs=49.0
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCC---hhHHHHHHHHcCCCe--EeeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTS---PSKEKEAKELLGADE--FILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~---~~~~~~~~~~~g~~~--~v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ +++|.++++.+...|++|+++.+. .++.+.+.+.++... ..|-.+.+..... .++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999994 689999988888899999987643 344444444355322 2344443322211 357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++++.|.
T Consensus 85 iD~lvnnAG~ 94 (260)
T PRK06997 85 LDGLVHSIGF 94 (260)
T ss_pred CcEEEEcccc
Confidence 9999998874
No 487
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.31 E-value=0.097 Score=45.59 Aligned_cols=73 Identities=14% Similarity=0.133 Sum_probs=49.5
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCC-eE--eeCccHHHHH----hcCCCcCEEE
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GAD-EF--ILSTNAMQMQ----AGKRTLDFIL 253 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~~--v~~~~~~~~~----~~~~~~d~vi 253 (360)
++++|+|+ |++|...++.+...|++|+++++++++.+.+.+.+ +.. ++ .|..+..... .....+|+++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv 81 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL 81 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence 57899999 99999999988889999999999987765543322 111 11 2333332222 2234679999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
.+.|.
T Consensus 82 ~~ag~ 86 (243)
T PRK07102 82 IAVGT 86 (243)
T ss_pred ECCcC
Confidence 88774
No 488
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=95.31 E-value=0.12 Score=47.90 Aligned_cols=75 Identities=16% Similarity=0.147 Sum_probs=52.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc--CCC-eEe--eCccHHHHHhcCCCcCEEEEcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL--GAD-EFI--LSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~--g~~-~~v--~~~~~~~~~~~~~~~d~vid~~g 257 (360)
.+.+|||+|+ |.+|..+++.+...|.+|++++++.++.+.+.+.+ +.. .++ |..+.+.....-.++|+||.+++
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~ 88 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVAA 88 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECCc
Confidence 6789999999 99999999999889999999988876555443322 111 111 33333344444457999999886
Q ss_pred C
Q 018158 258 A 258 (360)
Q Consensus 258 ~ 258 (360)
.
T Consensus 89 ~ 89 (353)
T PLN02896 89 S 89 (353)
T ss_pred c
Confidence 3
No 489
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.31 E-value=0.12 Score=45.11 Aligned_cols=75 Identities=15% Similarity=0.169 Sum_probs=51.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe-E--eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE-F--ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~-~--v~~~~~~~~~~~-------~~~~ 249 (360)
+++++||+|+ |.+|..+++.+...|++|++++++.++.+.+.+. .+... . .|..+.+..... ..++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5788999999 9999999999988999999999988776554432 23221 1 233333222221 2468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.+.|.
T Consensus 82 d~vi~~ag~ 90 (250)
T TIGR03206 82 DVLVNNAGW 90 (250)
T ss_pred CEEEECCCC
Confidence 999999973
No 490
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=95.30 E-value=0.17 Score=45.07 Aligned_cols=89 Identities=17% Similarity=0.182 Sum_probs=60.3
Q ss_pred CcEEEEEcCChHHHHHHHHHHH--cCCeEE-EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKA--FGHHVT-VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~--~G~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
.-++-|+|.|.+|...++.+.. .++++. +.++++++.+.+.+++|....+. +.+. .....|+|+.|++...+
T Consensus 6 ~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~~--~~ee---ll~~~D~Vvi~tp~~~h 80 (271)
T PRK13302 6 ELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPVV--PLDQ---LATHADIVVEAAPASVL 80 (271)
T ss_pred eeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcccC--CHHH---HhcCCCEEEECCCcHHH
Confidence 3578999999999987776665 367765 55667777666655576432222 2222 22458999999998766
Q ss_pred HHHHHHHhccCCEEEEe
Q 018158 262 LGPILELLKVNGTLSVV 278 (360)
Q Consensus 262 ~~~~~~~l~~~G~~v~~ 278 (360)
.+....+++.|..++..
T Consensus 81 ~e~~~~aL~aGk~Vi~~ 97 (271)
T PRK13302 81 RAIVEPVLAAGKKAIVL 97 (271)
T ss_pred HHHHHHHHHcCCcEEEe
Confidence 66677788877666654
No 491
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=95.29 E-value=0.11 Score=47.19 Aligned_cols=92 Identities=15% Similarity=0.133 Sum_probs=57.1
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH------HhcCCCcCEEEEcCCCc
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM------QAGKRTLDFILDTVSAK 259 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~------~~~~~~~d~vid~~g~~ 259 (360)
.+++|+|+|++|....-.+...|.+|+.+++..++.+.+++.-|. .+......... ......+|++|-|+=..
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~~V~lv~r~~~~~~~i~~~~Gl-~i~~~g~~~~~~~~~~~~~~~~~~D~viv~vK~~ 81 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGLPVRLILRDRQRLAAYQQAGGL-TLVEQGQASLYAIPAETADAAEPIHRLLLACKAY 81 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCeEEEEechHHHHHHhhcCCe-EEeeCCcceeeccCCCCcccccccCEEEEECCHH
Confidence 368999999999987777777899999999988888777652232 11111110000 01124689999887433
Q ss_pred c---cHHHHHHHhccCCEEEEe
Q 018158 260 H---SLGPILELLKVNGTLSVV 278 (360)
Q Consensus 260 ~---~~~~~~~~l~~~G~~v~~ 278 (360)
. .+..+...+.++..++.+
T Consensus 82 ~~~~al~~l~~~l~~~t~vv~l 103 (305)
T PRK05708 82 DAEPAVASLAHRLAPGAELLLL 103 (305)
T ss_pred hHHHHHHHHHhhCCCCCEEEEE
Confidence 2 234444455666666655
No 492
>PRK01581 speE spermidine synthase; Validated
Probab=95.28 E-value=0.37 Score=44.42 Aligned_cols=95 Identities=17% Similarity=0.155 Sum_probs=62.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcC------------CC-eEeeCccHHHHHhcCCCc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLG------------AD-EFILSTNAMQMQAGKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g------------~~-~~v~~~~~~~~~~~~~~~ 249 (360)
..++|||+|+| .|.++..+++..+ .+|++++.+++-.+.+++ +. .. .++..+....+......+
T Consensus 150 ~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~-~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~~~~Y 227 (374)
T PRK01581 150 DPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARN-VPELVSLNKSAFFDNRVNVHVCDAKEFLSSPSSLY 227 (374)
T ss_pred CCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh-ccccchhccccCCCCceEEEECcHHHHHHhcCCCc
Confidence 56799999975 4667777777655 489999999998888885 21 11 112222223334446689
Q ss_pred CEEEEcCCCc-----------ccHHHHHHHhccCCEEEEeCC
Q 018158 250 DFILDTVSAK-----------HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 250 d~vid~~g~~-----------~~~~~~~~~l~~~G~~v~~g~ 280 (360)
|+||--...+ ..+..+.+.|+++|.++.-..
T Consensus 228 DVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~ 269 (374)
T PRK01581 228 DVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN 269 (374)
T ss_pred cEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 9998443221 236788999999999877643
No 493
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.11 Score=47.16 Aligned_cols=34 Identities=26% Similarity=0.117 Sum_probs=31.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
.+++++|+|+ +++|.++++.+...|++|++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 5789999999 999999999999999999999987
No 494
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.27 E-value=0.19 Score=48.36 Aligned_cols=71 Identities=23% Similarity=0.317 Sum_probs=49.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh-hHH----HHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP-SKE----KEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~-~~~----~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
.+++++|+|+|.+|+.++..+...|++|++++++. +.. +.+.+ .|.. ++..+..+ ....++|+|+.+.|.
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-~~~~-~~~~~~~~---~~~~~~d~vv~~~g~ 78 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-LGIE-LVLGEYPE---EFLEGVDLVVVSPGV 78 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-cCCE-EEeCCcch---hHhhcCCEEEECCCC
Confidence 47899999998899999999999999999999874 222 33333 4544 22221111 223569999999885
Q ss_pred c
Q 018158 259 K 259 (360)
Q Consensus 259 ~ 259 (360)
.
T Consensus 79 ~ 79 (450)
T PRK14106 79 P 79 (450)
T ss_pred C
Confidence 4
No 495
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=95.25 E-value=0.11 Score=43.13 Aligned_cols=74 Identities=16% Similarity=0.204 Sum_probs=51.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC--CeEe---eCccHHH----HHhc---CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA--DEFI---LSTNAMQ----MQAG---KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~--~~~v---~~~~~~~----~~~~---~~~~d 250 (360)
..+.++|.|+ +++|.+..|++-..|++|.+.+.+.+..+.....+|. +|.- |-.+... +++. -..++
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps 92 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS 92 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence 3466788888 9999999999999999999999887765555554764 3321 2222211 1221 34799
Q ss_pred EEEEcCC
Q 018158 251 FILDTVS 257 (360)
Q Consensus 251 ~vid~~g 257 (360)
++++|.|
T Consensus 93 vlVncAG 99 (256)
T KOG1200|consen 93 VLVNCAG 99 (256)
T ss_pred EEEEcCc
Confidence 9999999
No 496
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=95.24 E-value=0.15 Score=46.79 Aligned_cols=96 Identities=21% Similarity=0.290 Sum_probs=63.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCC----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVS---- 257 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g---- 257 (360)
++.+||-+|+|. |..+..+++..+ .+|++++.+++-++.++++.....+ +...+..........+|+|+.+..
T Consensus 113 ~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~gD~e~lp~~~~sFDvVIs~~~L~~~ 191 (340)
T PLN02490 113 RNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFPTDYADRYVSAGSIEYW 191 (340)
T ss_pred CCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEeccHHhCCCCCCceeEEEEcChhhhC
Confidence 678899999865 667777777764 5899999999888888775432111 111111111111356999986432
Q ss_pred --CcccHHHHHHHhccCCEEEEeCC
Q 018158 258 --AKHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 258 --~~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
....++++.+.|+++|+++.++.
T Consensus 192 ~d~~~~L~e~~rvLkPGG~LvIi~~ 216 (340)
T PLN02490 192 PDPQRGIKEAYRVLKIGGKACLIGP 216 (340)
T ss_pred CCHHHHHHHHHHhcCCCcEEEEEEe
Confidence 12356889999999999987753
No 497
>PRK10637 cysG siroheme synthase; Provisional
Probab=95.23 E-value=0.19 Score=48.44 Aligned_cols=117 Identities=10% Similarity=-0.042 Sum_probs=73.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP-SKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~-~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
.|++|||+|+|.++.-=++.+...|++|+++...- +.+..+.+ .|.-..+. .+. ....-.++++||-|+++....
T Consensus 11 ~~~~vlvvGgG~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~~-~~~i~~~~-~~~--~~~dl~~~~lv~~at~d~~~n 86 (457)
T PRK10637 11 RDRDCLLVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWAD-AGMLTLVE-GPF--DESLLDTCWLAIAATDDDAVN 86 (457)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHh-CCCEEEEe-CCC--ChHHhCCCEEEEECCCCHHHh
Confidence 68999999999999988888888999999997642 23333333 33222221 111 111135789999999988766
Q ss_pred HHHHHHhccCCEEEEeCCCCCCcccChhh-HhccCcEEEEeec
Q 018158 263 GPILELLKVNGTLSVVGAPEAPFELPSFP-LIFGKRSVKGSMT 304 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~ 304 (360)
.++....+..|.++++.......++-... +....+++.-+..
T Consensus 87 ~~i~~~a~~~~~lvN~~d~~~~~~f~~pa~~~~g~l~iaisT~ 129 (457)
T PRK10637 87 QRVSEAAEARRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSSG 129 (457)
T ss_pred HHHHHHHHHcCcEEEECCCcccCeEEEeeEEecCCEEEEEECC
Confidence 67777777888888876554322222222 2233455544433
No 498
>PRK09134 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.18 Score=44.32 Aligned_cols=75 Identities=13% Similarity=0.148 Sum_probs=48.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHc---CCCe-E--eeCccHHHHHh-------cCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS-PSKEKEAKELL---GADE-F--ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~-~~~~~~~~~~~---g~~~-~--v~~~~~~~~~~-------~~~~ 248 (360)
.++++||+|+ |.+|..+++.+...|++|+++.+. .++.+.+.+.+ +... . .|..+.+.... ...+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5678999999 999999998888899998887653 44444333322 3321 1 23333322221 1357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|.+.|.
T Consensus 88 iD~vi~~ag~ 97 (258)
T PRK09134 88 ITLLVNNASL 97 (258)
T ss_pred CCEEEECCcC
Confidence 9999999873
No 499
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=95.23 E-value=0.17 Score=42.35 Aligned_cols=92 Identities=18% Similarity=0.187 Sum_probs=55.8
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHH---HH--hcCCCcCEEEE-
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQ---MQ--AGKRTLDFILD- 254 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~---~~--~~~~~~d~vid- 254 (360)
++|++||.+|+|+-+.+.....+..+ .+|++++.++.+ ...+.+.+ .|..+... .. ....++|+|+.
T Consensus 31 ~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~-----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~V~~~ 105 (188)
T TIGR00438 31 KPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK-----PIENVDFIRGDFTDEEVLNKIRERVGDDKVDVVMSD 105 (188)
T ss_pred CCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc-----cCCCceEEEeeCCChhHHHHHHHHhCCCCccEEEcC
Confidence 49999999999765554444333323 479999998754 11233222 13322211 11 12457999995
Q ss_pred cC----CC------------cccHHHHHHHhccCCEEEEeC
Q 018158 255 TV----SA------------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 255 ~~----g~------------~~~~~~~~~~l~~~G~~v~~g 279 (360)
.. |. ...+..+.++|+++|+++...
T Consensus 106 ~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 106 AAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred CCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 22 21 235677899999999998764
No 500
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=95.22 E-value=0.1 Score=49.12 Aligned_cols=98 Identities=17% Similarity=0.194 Sum_probs=61.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHH------HHHHHc-CCCeE-eeCccHHHHHhcC----CCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEK------EAKELL-GADEF-ILSTNAMQMQAGK----RTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~------~~~~~~-g~~~~-v~~~~~~~~~~~~----~~~d 250 (360)
.+.+++|+|+ |.+|..+++.+...|.+|++++++..+.. ...... +.+.+ .|..+.+.+...- .++|
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D 138 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVD 138 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCc
Confidence 6789999999 99999999999889999999998875421 111112 22222 2444444443331 2799
Q ss_pred EEEEcCCCcc------------cHHHHHHHhccC--CEEEEeCCC
Q 018158 251 FILDTVSAKH------------SLGPILELLKVN--GTLSVVGAP 281 (360)
Q Consensus 251 ~vid~~g~~~------------~~~~~~~~l~~~--G~~v~~g~~ 281 (360)
+||+|.+... ....+++.++.. ++++.++..
T Consensus 139 ~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 139 VVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred EEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 9999886321 112344544443 478877654
Done!