BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018161
(360 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus
pdb|2ADD|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With Sucrose
pdb|2ADE|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With Fructose
pdb|2AEY|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With 2,5
Dideoxy-2,5-Immino-D-Mannitol
Length = 543
Score = 404 bits (1037), Expect = e-113, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 228/310 (73%), Gaps = 4/310 (1%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
QPY T YHF+PP NW+NDPNGPM Y+GVYH FYQYNP FGD +IW H+VSYDL+NW
Sbjct: 4 EQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNW 63
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
IHL A+ P+ D SCWSGS TILPG+ P +LYTG D+ +QVQ+LA P+NLSDP L+
Sbjct: 64 IHLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLR 123
Query: 171 DWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIH 230
+WVK NP++TPP GVKDD FRDP+TAW PDG WR++VGG DN GMAF+Y S DF++
Sbjct: 124 EWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDFVN 183
Query: 231 WTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVL 290
W + D PL S TG WECPD +PV +N T G+DTSV V+HV+K + HD+Y +
Sbjct: 184 WKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGF--EGHDWYTI 241
Query: 291 GTYDPQMDIFSPDT--DFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQD 348
GTY P + F P G++ DLRYDYG+FYASK+FFD AKNRRVLWAW E+DS D
Sbjct: 242 GTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQAD 301
Query: 349 DIDKGWSGVQ 358
DI+KGW+G+Q
Sbjct: 302 DIEKGWAGLQ 311
>pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q)
From Cichorium Intybus In Complex With 1-Kestose
Length = 543
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 185/310 (59%), Positives = 228/310 (73%), Gaps = 4/310 (1%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
QPY T YHF+PP NW+NDPNGPM Y+GVYH FYQYNP FGD +IW H+VSYDL+NW
Sbjct: 4 EQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNW 63
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
IHL A+ P+ D SCWSGS TILPG+ P +LYTG D+ +QVQ+LA P+NLSDP L+
Sbjct: 64 IHLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLR 123
Query: 171 DWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIH 230
+WVK NP++TPP GVKDD FRDP+TAW PDG WR++VGG DN GMAF+Y S DF++
Sbjct: 124 EWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDFVN 183
Query: 231 WTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVL 290
W + D PL S TG W+CPD +PV +N T G+DTSV V+HV+K + HD+Y +
Sbjct: 184 WKRYDQPLSSADATGTWQCPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGF--EGHDWYTI 241
Query: 291 GTYDPQMDIFSPDT--DFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQD 348
GTY P + F P G++ DLRYDYG+FYASK+FFD AKNRRVLWAW E+DS D
Sbjct: 242 GTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQAD 301
Query: 349 DIDKGWSGVQ 358
DI+KGW+G+Q
Sbjct: 302 DIEKGWAGLQ 311
>pdb|2AC1|A Chain A, Crystal Structure Of A Cell-Wall Invertase From
Arabidopsis Thaliana
Length = 541
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/319 (57%), Positives = 224/319 (70%), Gaps = 6/319 (1%)
Query: 47 SAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD 106
S NQPY T +HF+PP+NW+NDPNGPM YKG+YHLFYQ+NP G ++G+ ++WAHS S D
Sbjct: 1 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGN-IVWAHSTSTD 59
Query: 107 LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSD 166
LINW A+ PS P+DIN CWSGS TILP KP ILYTGID QQVQN+A P+NLSD
Sbjct: 60 LINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSD 119
Query: 167 PLLKDWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYW 224
P L++W K NP+M P NG+ FRDPTTAW D +WRV++G +I G+A Y
Sbjct: 120 PYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYT 179
Query: 225 SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVL---NPGVKHVLKTSLF 281
S DF+ W K PL+ +GMWECPD FPV+ G+ GV+TS N +KHVLK SL
Sbjct: 180 SKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLD 239
Query: 282 SDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWAN 341
KHDYY +GTYD D F PD F + RYDYGK+YASKTFFDSAKNRR+LW W N
Sbjct: 240 DTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTN 299
Query: 342 ESDSTQDDIDKGWSGVQVI 360
ES S +DD++KGWSG+Q I
Sbjct: 300 ESSSVEDDVEKGWSGIQTI 318
>pdb|2QQU|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D239a) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 535
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/315 (58%), Positives = 223/315 (70%), Gaps = 6/315 (1%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
NQPY T +HF+PP+NW+NDPNGPM YKG+YHLFYQ+NP G ++G+ ++WAHS S DLINW
Sbjct: 1 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGN-IVWAHSTSTDLINW 59
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
A+ PS P+DIN CWSGS TILP KP ILYTGID QQVQN+A P+NLSDP L+
Sbjct: 60 DPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLR 119
Query: 171 DWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDF 228
+W K NP+M P NG+ FRDPTTAW D +WRV++G +I G+A Y S DF
Sbjct: 120 EWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDF 179
Query: 229 IHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVL---NPGVKHVLKTSLFSDKH 285
+ W K PL+ +GMWECPD FPV+ G+ GV+TS N +KHVLK SL KH
Sbjct: 180 LKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLADTKH 239
Query: 286 DYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDS 345
DYY +GTYD D F PD F + RYDYGK+YASKTFFDSAKNRR+LW W NES S
Sbjct: 240 DYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSS 299
Query: 346 TQDDIDKGWSGVQVI 360
+DD++KGWSG+Q I
Sbjct: 300 VEDDVEKGWSGIQTI 314
>pdb|2XQR|A Chain A, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|C Chain C, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|E Chain E, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|G Chain G, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|I Chain I, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|K Chain K, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
Length = 537
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/315 (58%), Positives = 223/315 (70%), Gaps = 6/315 (1%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
NQPY T +HF+PP+NW+NDPNGPM YKG+YHLFYQ+NP G ++G+ ++WAHS S DLINW
Sbjct: 1 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGN-IVWAHSTSTDLINW 59
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
A+ PS P+DIN CWSGS TILP KP ILYTGID QQVQN+A P+NLSDP L+
Sbjct: 60 DPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLR 119
Query: 171 DWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDF 228
+W K NP+M P NG+ FRDPTTAW D +WRV++G +I G+A Y S DF
Sbjct: 120 EWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDF 179
Query: 229 IHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVL---NPGVKHVLKTSLFSDKH 285
+ W K PL+ +GMWECPD FPV+ G+ GV+TS N +KHVLK SL KH
Sbjct: 180 LKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKH 239
Query: 286 DYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDS 345
DYY +GTYD D F PD F + RYDYGK+YASKTFFDSAKNRR+LW W NES S
Sbjct: 240 DYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSS 299
Query: 346 TQDDIDKGWSGVQVI 360
+DD++KGWSG+Q I
Sbjct: 300 VEDDVEKGWSGIQTI 314
>pdb|2OXB|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203q) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 537
Score = 380 bits (977), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/315 (58%), Positives = 223/315 (70%), Gaps = 6/315 (1%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
NQPY T +HF+PP+NW+NDPNGPM YKG+YHLFYQ+NP G ++G+ ++WAHS S DLINW
Sbjct: 1 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGN-IVWAHSTSTDLINW 59
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
A+ PS P+DIN CWSGS TILP KP ILYTGID QQVQN+A P+NLSDP L+
Sbjct: 60 DPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLR 119
Query: 171 DWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDF 228
+W K NP+M P NG+ FRDPTTAW D +WRV++G +I G+A Y S DF
Sbjct: 120 EWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDF 179
Query: 229 IHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVL---NPGVKHVLKTSLFSDKH 285
+ W K PL+ +GMW+CPD FPV+ G+ GV+TS N +KHVLK SL KH
Sbjct: 180 LKWEKSPEPLHYDDGSGMWQCPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKH 239
Query: 286 DYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDS 345
DYY +GTYD D F PD F + RYDYGK+YASKTFFDSAKNRR+LW W NES S
Sbjct: 240 DYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSS 299
Query: 346 TQDDIDKGWSGVQVI 360
+DD++KGWSG+Q I
Sbjct: 300 VEDDVEKGWSGIQTI 314
>pdb|2QQV|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203a) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 537
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/315 (58%), Positives = 222/315 (70%), Gaps = 6/315 (1%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
NQPY T +HF+PP+NW+NDPNGPM YKG+YHLFYQ+NP G ++G+ ++WAHS S DLINW
Sbjct: 1 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGN-IVWAHSTSTDLINW 59
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
A+ PS P+DIN CWSGS TILP KP ILYTGID QQVQN+A P+NLSDP L+
Sbjct: 60 DPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLR 119
Query: 171 DWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDF 228
+W K NP+M P NG+ FRDPTTAW D +WRV++G +I G+A Y S DF
Sbjct: 120 EWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDF 179
Query: 229 IHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVL---NPGVKHVLKTSLFSDKH 285
+ W K PL+ +GMW CPD FPV+ G+ GV+TS N +KHVLK SL KH
Sbjct: 180 LKWEKSPEPLHYDDGSGMWACPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKH 239
Query: 286 DYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDS 345
DYY +GTYD D F PD F + RYDYGK+YASKTFFDSAKNRR+LW W NES S
Sbjct: 240 DYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSS 299
Query: 346 TQDDIDKGWSGVQVI 360
+DD++KGWSG+Q I
Sbjct: 300 VEDDVEKGWSGIQTI 314
>pdb|2QQW|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 537
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/315 (58%), Positives = 222/315 (70%), Gaps = 6/315 (1%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
NQPY T +HF+PP+NW+N PNGPM YKG+YHLFYQ+NP G ++G+ ++WAHS S DLINW
Sbjct: 1 NQPYRTGFHFQPPKNWMNAPNGPMIYKGIYHLFYQWNPKGAVWGN-IVWAHSTSTDLINW 59
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
A+ PS P+DIN CWSGS TILP KP ILYTGID QQVQN+A P+NLSDP L+
Sbjct: 60 DPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLR 119
Query: 171 DWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDF 228
+W K NP+M P NG+ FRDPTTAW D +WRV++G +I G+A Y S DF
Sbjct: 120 EWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDF 179
Query: 229 IHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVL---NPGVKHVLKTSLFSDKH 285
+ W K PL+ +GMWECPD FPV+ G+ GV+TS N +KHVLK SL KH
Sbjct: 180 LKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKH 239
Query: 286 DYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDS 345
DYY +GTYD D F PD F + RYDYGK+YASKTFFDSAKNRR+LW W NES S
Sbjct: 240 DYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSS 299
Query: 346 TQDDIDKGWSGVQVI 360
+DD++KGWSG+Q I
Sbjct: 300 VEDDVEKGWSGIQTI 314
>pdb|3UGF|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis
pdb|3UGF|B Chain B, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis
pdb|3UGG|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 1-Kestose
pdb|3UGG|B Chain B, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 1-Kestose
pdb|3UGH|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 6-Kestose
pdb|3UGH|B Chain B, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 6-Kestose
Length = 546
Score = 301 bits (770), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 142/305 (46%), Positives = 203/305 (66%), Gaps = 1/305 (0%)
Query: 56 TSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSH 115
T++HF+P ++W++DP+GP++YKG YH FYQYNP P++G+ W H+VS DLI+W++L
Sbjct: 20 TAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNN-TWGHTVSRDLIHWLYLPL 78
Query: 116 ALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKF 175
AL YD+ +SGS T LP + +LYTG+ ++ +LA P +LSDPLL +WVK+
Sbjct: 79 ALAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKY 138
Query: 176 SGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLD 235
GNP+++ P GV FRD +T W +G WR+ +G + + G+A VY + DF + L+
Sbjct: 139 PGNPILSAPPGVSPTEFRDASTGWYVSNGTWRIAIGAKYNTTGIAMVYETKDFKSFKLLE 198
Query: 236 HPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDP 295
L++V +TG+WEC D++PVS G G++TSV P VKHVLK S+ + DYY +GTYD
Sbjct: 199 ELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQQRDYYAIGTYDL 258
Query: 296 QMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWS 355
+ ++PD LRYD+GK+YASKTF+D K RRV+WAW E DS D +KGW+
Sbjct: 259 GTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSEVADREKGWA 318
Query: 356 GVQVI 360
VQ I
Sbjct: 319 NVQTI 323
>pdb|1UYP|A Chain A, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|B Chain B, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|C Chain C, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|D Chain D, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|E Chain E, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|F Chain F, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
Length = 432
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 128/253 (50%), Gaps = 28/253 (11%)
Query: 57 SYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHA 116
+YHF P W+NDPNG +++KG YH+FYQYNP P +G+ + W H+VS DL++W HL A
Sbjct: 5 NYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGN-ICWGHAVSDDLVHWRHLPVA 63
Query: 117 LCPSGPYDINSCWSGSVTILPGDKPFILYT-----GIDASGQQVQNLAMPENLSDPLLKD 171
L P + + +SGS G K F++YT + ++ Q + M EN D
Sbjct: 64 LYPDD--ETHGVFSGSAVEKDG-KMFLVYTYYRDPTHNKGEKETQCVVMSENGL-----D 115
Query: 172 WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG-GQIDNEGMAFVYWSWDFIH 230
+VK+ GNPV++ P FRDP +G WR+++G G+ + G +Y S D H
Sbjct: 116 FVKYDGNPVISKPPEEGTHAFRDPKV--NRSNGEWRMVLGSGKDEKIGRVLLYTSDDLFH 173
Query: 231 WTKLDHPLYSVQETGMWECPD----------IFPVSINGTIGVDTSVLNPGVKHVLKTSL 280
W K + ++ + T ECPD I+ ++ ++ L G +V K L
Sbjct: 174 W-KYEGAIFEDETTKEIECPDLVRIGEKDILIYSITSTNSVLFSMGELKEGKLNVEKRGL 232
Query: 281 FSDKHDYYVLGTY 293
D+Y T+
Sbjct: 233 LDHGTDFYAAQTF 245
>pdb|1W2T|A Chain A, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|B Chain B, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|C Chain C, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|D Chain D, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|E Chain E, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|F Chain F, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
Length = 432
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 128/253 (50%), Gaps = 28/253 (11%)
Query: 57 SYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHA 116
+YHF P W+NDPNG +++KG YH+FYQYNP P +G+ + W H+VS DL++W HL A
Sbjct: 5 NYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGN-ICWGHAVSDDLVHWRHLPVA 63
Query: 117 LCPSGPYDINSCWSGSVTILPGDKPFILYT-----GIDASGQQVQNLAMPENLSDPLLKD 171
L P + + +SGS G K F++YT + ++ Q + M EN D
Sbjct: 64 LYPDD--ETHGVFSGSAVEKDG-KMFLVYTYYRDPTHNKGEKETQCVVMSENGL-----D 115
Query: 172 WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG-GQIDNEGMAFVYWSWDFIH 230
+VK+ GNPV++ P FRDP +G WR+++G G+ + G +Y S D H
Sbjct: 116 FVKYDGNPVISKPPEEGTHAFRDPKV--NRSNGEWRMVLGSGKDEKIGRVLLYTSDDLFH 173
Query: 231 WTKLDHPLYSVQETGMWECPD----------IFPVSINGTIGVDTSVLNPGVKHVLKTSL 280
W K + ++ + T +CPD I+ ++ ++ L G +V K L
Sbjct: 174 W-KYEGAIFEDETTKEIDCPDLVRIGEKDILIYSITSTNSVLFSMGELKEGKLNVEKRGL 232
Query: 281 FSDKHDYYVLGTY 293
D+Y T+
Sbjct: 233 LDHGTDFYAAQTF 245
>pdb|1Y9M|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus
Awamori In Spacegroup P212121
pdb|1Y9G|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus
Awamori Complexed With Fructose
pdb|1Y4W|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus
Awamori In Spacegroup P21
Length = 518
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 144/321 (44%), Gaps = 40/321 (12%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
+QPY YHF P +NW+NDPNG +Y+ G YHLF+QYNP G +G+ + W H++S DL +W
Sbjct: 4 DQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGN-ISWGHAISEDLTHW 62
Query: 111 IHLSHALCPSG-PYDINSCW-SGSVTI---------LPGDKPFI-LYTG------IDASG 152
AL G D+ + SGS G P + +YT SG
Sbjct: 63 EEKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSG 122
Query: 153 QQVQNLAMPENLSDPLLK--DWVKF-SGNPVM-TPPNGVKDDM--FRDPTTAWQAPDGRW 206
Q VQ ++++ L W + + NPV+ PP+ + + FRDP W +W
Sbjct: 123 QTVQEDQQSQSIAYSLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQKW 182
Query: 207 RVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPV---SINGTIGV 263
V+ I +Y S + W + + G+WECP + + S N T V
Sbjct: 183 VVVT--SIAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDSGNSTKWV 240
Query: 264 DTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTD--FHGNSNDLRYDYG-KF 320
TS LNPG S Y +G +D F+PD D + GNS D+G F
Sbjct: 241 ITSGLNPGGPPGTVGS-----GTQYFVGEFDGT--TFTPDADTVYPGNSTANWMDWGPDF 293
Query: 321 YASKTFFDSAKNRRVLWAWAN 341
YA+ + + N V W N
Sbjct: 294 YAAAGYNGLSLNDHVHIGWMN 314
>pdb|3PIG|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum
pdb|3PIG|B Chain B, Beta-Fructofuranosidase From Bifidobacterium Longum
pdb|3PIJ|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum -
Complex With Fructose
pdb|3PIJ|B Chain B, Beta-Fructofuranosidase From Bifidobacterium Longum -
Complex With Fructose
Length = 526
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 143/328 (43%), Gaps = 38/328 (11%)
Query: 45 QVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVS 104
+++A N + YH WINDPNG +YKG +H+FYQ +P G +G M W H S
Sbjct: 30 EMAAKRNNRWYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWG-PMHWGHVSS 88
Query: 105 YDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGID-ASGQ-------QVQ 156
D++NW PS + + +SGS I YTG A+G QVQ
Sbjct: 89 TDMLNWKREPIMFAPSLEQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQ 148
Query: 157 NLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216
A+P+N D L G + P + V D +RDP W+ D + D
Sbjct: 149 MTALPDN--DELTS--ATKQGMIIDCPTDKV-DHHYRDPKV-WKTGDTWYMTFGVSSADK 202
Query: 217 EGMAFVYWSWDFIHW----TKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGV 272
G +++ S D + W HP V M ECPD P I G + V+
Sbjct: 203 RGQMWLFSSKDMVRWEYERVLFQHPDPDVF---MLECPDFSP--IKDKDGNEKWVIGFSA 257
Query: 273 KHVLKTSLFSDK---HDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYG-KFYASKTFFD 328
K S F ++ + Y++GT++P + F P+T+F +D G +YA ++F
Sbjct: 258 MGS-KPSGFMNRNVSNAGYMIGTWEPGGE-FKPETEFR------LWDCGHNYYAPQSF-- 307
Query: 329 SAKNRRVLWAWANESDSTQDDIDKGWSG 356
+ R++++ W + D GW G
Sbjct: 308 NVDGRQIVYGWMSPFVQPIPMEDDGWCG 335
>pdb|3SC7|X Chain X, First Crystal Structure Of An Endo-Inulinase, From
Aspergillus Ficuum: Structural Analysis And Comparison
With Other Gh32 Enzymes.
pdb|3RWK|X Chain X, First Crystal Structure Of An Endo-Inulinase, From
Aspergillus Ficuum: Structural Analysis And Comparison
With Other Gh32 Enzymes
Length = 516
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 110/231 (47%), Gaps = 37/231 (16%)
Query: 54 YLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL 113
Y SYHF P Q W+N+PNG + +HLF+Q+NP ++G+ + W H+ S DL++W H
Sbjct: 28 YRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGN-ICWGHATSTDLMHWAHK 86
Query: 114 SHALCPSGPYDINSCWSGSVTILP------GDK---PFIL-YTGIDASGQ-QVQNLAMPE 162
A+ + ++G+ P GD P++ +TG S Q Q Q LA
Sbjct: 87 PTAIADENGVE---AFTGTAYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQDQRLAFSV 143
Query: 163 NLSDPLLKDWVKFSGNPVMTPPNGVKDDMF-----RDPTTAWQAPDGRWRVLV--GGQID 215
+ W KF GNP+++ D+ RDP + G W +++ GGQ
Sbjct: 144 DNG----ATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFFHRQSGNWIMVLAHGGQ-- 197
Query: 216 NEGMAFVYWSWDFIHWTKLDHPLYSVQETGM------WECPDIFPVSINGT 260
+ ++F + S D I+WT L S G+ WE PD+F + + GT
Sbjct: 198 -DKLSF-WTSADTINWT-WQSDLKSTSINGLSSDITGWEVPDMFELPVEGT 245
>pdb|3KF5|A Chain A, Structure Of Invertase From Schwanniomyces Occidentalis
pdb|3KF5|B Chain B, Structure Of Invertase From Schwanniomyces Occidentalis
Length = 512
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 127/296 (42%), Gaps = 44/296 (14%)
Query: 47 SAPANQPYLTSYHFRPPQNWINDPNGPMYYK--GVYHLFYQYNPLGPLFGDKMIWAHSVS 104
++ N+P + HF P + W+NDPNG Y K ++HL++QYNP +G + W H+ S
Sbjct: 8 TSEYNRPLI---HFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATS 64
Query: 105 YDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENL 164
DL++W A+ P +D +SGS+ + + + ID + + V N+
Sbjct: 65 NDLVHWDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVA--IYTNNI 120
Query: 165 SDPLLKD----------WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214
D +D + K+ NPV+ V + FRDP W +W ++V
Sbjct: 121 PDNQTQDIAFSLDGGYTFTKYENNPVI----DVSSNQFRDPKVFWHEDSNQWIMVVSKS- 175
Query: 215 DNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIG---VDTSVLNPG 271
E ++ S + +W L+ S +ECP + V I + V +NPG
Sbjct: 176 -QEYKIQIFGSANLKNWV-LNSNFSSGYYGNQYECPGLIEVPIENSDKSKWVMFLAINPG 233
Query: 272 VKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTF 326
S + Y +G +D F PD +S D GK FYA +TF
Sbjct: 234 -------SPLGGSINQYFVGDFDGFQ--FVPD-----DSQTRFVDIGKDFYAFQTF 275
>pdb|3KF3|A Chain A, Structure Of Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructose
pdb|3KF3|B Chain B, Structure Of Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructose
Length = 509
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 127/296 (42%), Gaps = 44/296 (14%)
Query: 47 SAPANQPYLTSYHFRPPQNWINDPNGPMYYK--GVYHLFYQYNPLGPLFGDKMIWAHSVS 104
++ N+P + HF P + W+NDPNG Y K ++HL++QYNP +G + W H+ S
Sbjct: 5 TSEYNRPLI---HFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATS 61
Query: 105 YDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENL 164
DL++W A+ P +D +SGS+ + + + ID + + V N+
Sbjct: 62 NDLVHWDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVA--IYTNNI 117
Query: 165 SDPLLKD----------WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214
D +D + K+ NPV+ V + FRDP W +W ++V
Sbjct: 118 PDNQTQDIAFSLDGGYTFTKYENNPVI----DVSSNQFRDPKVFWHEDSNQWIMVVSKS- 172
Query: 215 DNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIG---VDTSVLNPG 271
E ++ S + +W L+ S +ECP + V I + V +NPG
Sbjct: 173 -QEYKIQIFGSANLKNWV-LNSNFSSGYYGNQYECPGLIEVPIENSDKSKWVMFLAINPG 230
Query: 272 VKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTF 326
S + Y +G +D F PD +S D GK FYA +TF
Sbjct: 231 -------SPLGGSINQYFVGDFDGFQ--FVPD-----DSQTRFVDIGKDFYAFQTF 272
>pdb|3U75|A Chain A, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
pdb|3U75|B Chain B, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
pdb|3U75|C Chain C, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
pdb|3U75|D Chain D, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
Length = 535
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 126/296 (42%), Gaps = 44/296 (14%)
Query: 47 SAPANQPYLTSYHFRPPQNWINDPNGPMYYK--GVYHLFYQYNPLGPLFGDKMIWAHSVS 104
++ N+P + HF P + W+NDPNG Y K ++HL++QYNP +G + W H+ S
Sbjct: 31 TSEYNRPLI---HFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATS 87
Query: 105 YDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENL 164
DL++W A+ P +D +SGS+ + + + ID + + V N+
Sbjct: 88 NDLVHWDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVA--IYTNNI 143
Query: 165 SDPLLKD----------WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214
D +D + K+ NPV+ V + FRDP W +W ++V
Sbjct: 144 PDNQTQDIAFSLDGGYTFTKYENNPVI----DVSSNQFRDPKVFWHEDSNQWIMVVSKS- 198
Query: 215 DNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIG---VDTSVLNPG 271
E ++ S + +W L+ S + CP + V I + V +NPG
Sbjct: 199 -QEYKIQIFGSANLKNWV-LNSNFSSGYYGNQYACPGLIEVPIENSDKSKWVMFLAINPG 256
Query: 272 VKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTF 326
S + Y +G +D F PD +S D GK FYA +TF
Sbjct: 257 -------SPLGGSINQYFVGDFDGFQ--FVPD-----DSQTRFVDIGKDFYAFQTF 298
>pdb|3U14|A Chain A, Structure Of D50a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Inulin
pdb|3U14|B Chain B, Structure Of D50a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Inulin
Length = 535
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 126/296 (42%), Gaps = 44/296 (14%)
Query: 47 SAPANQPYLTSYHFRPPQNWINDPNGPMYYK--GVYHLFYQYNPLGPLFGDKMIWAHSVS 104
++ N+P + HF P + W+N PNG Y K ++HL++QYNP +G + W H+ S
Sbjct: 31 TSEYNRPLI---HFTPEKGWMNAPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATS 87
Query: 105 YDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENL 164
DL++W A+ P +D +SGS+ + + + ID + + V N+
Sbjct: 88 NDLVHWDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVA--IYTNNI 143
Query: 165 SDPLLKD----------WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214
D +D + K+ NPV+ V + FRDP W +W ++V
Sbjct: 144 PDNQTQDIAFSLDGGYTFTKYENNPVI----DVSSNQFRDPKVFWHEDSNQWIMVVSKS- 198
Query: 215 DNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIG---VDTSVLNPG 271
E ++ S + +W L+ S +ECP + V I + V +NPG
Sbjct: 199 -QEYKIQIFGSANLKNWV-LNSNFSSGYYGNQYECPGLIEVPIENSDKSKWVMFLAINPG 256
Query: 272 VKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTF 326
S + Y +G +D F PD +S D GK FYA +TF
Sbjct: 257 -------SPLGGSINQYFVGDFDGFQ--FVPD-----DSQTRFVDIGKDFYAFQTF 298
>pdb|4FFF|A Chain A, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
pdb|4FFF|B Chain B, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
pdb|4FFF|C Chain C, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
pdb|4FFF|D Chain D, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
Length = 490
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 78/222 (35%), Gaps = 33/222 (14%)
Query: 55 LTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS 114
+ YH PP W+ DP P+ G Y L+Y ++ G W H+ + D + + H
Sbjct: 1 MAVYHMTPPSGWLCDPQRPVTTHGAYQLYYLHSDQNNGPGG---WDHASTTDGVAFTHHG 57
Query: 115 HA--LCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMP----------- 161
L P P WSGS + + + A Q +
Sbjct: 58 TVMPLRPDFP-----VWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTD 112
Query: 162 -----ENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216
L DP++ V G TP + FRDP W G W ++G
Sbjct: 113 GGFTFTALPDPVI---VNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIG----R 165
Query: 217 EGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSIN 258
A Y S + WT + Y G ECPD+F ++ +
Sbjct: 166 LRYAAFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITAD 207
>pdb|4FFG|A Chain A, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
pdb|4FFG|B Chain B, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
pdb|4FFG|C Chain C, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
pdb|4FFG|D Chain D, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
Length = 492
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 78/222 (35%), Gaps = 33/222 (14%)
Query: 55 LTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS 114
+ YH PP W+ DP P+ G Y L+Y ++ G W H+ + D + + H
Sbjct: 1 MAVYHMTPPSGWLCDPQRPVTTHGAYQLYYLHSDQNNGPGG---WDHASTTDGVAFTHHG 57
Query: 115 HA--LCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMP----------- 161
L P P WSGS + + + A Q +
Sbjct: 58 TVMPLRPDFP-----VWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTD 112
Query: 162 -----ENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216
L DP++ V G TP + FRDP W G W ++G
Sbjct: 113 GGFTFTALPDPVI---VNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIG----R 165
Query: 217 EGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSIN 258
A Y S + WT + Y G ECPD+F ++ +
Sbjct: 166 LRYAAFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITAD 207
>pdb|4FFH|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFH|B Chain B, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFH|C Chain C, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFH|D Chain D, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFI|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
pdb|4FFI|B Chain B, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
pdb|4FFI|C Chain C, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
pdb|4FFI|D Chain D, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
Length = 492
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 78/222 (35%), Gaps = 33/222 (14%)
Query: 55 LTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS 114
+ YH PP W+ +P P+ G Y L+Y ++ G W H+ + D + + H
Sbjct: 1 MAVYHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNNGPGG---WDHASTTDGVAFTHHG 57
Query: 115 HA--LCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMP----------- 161
L P P WSGS + + + A Q +
Sbjct: 58 TVMPLRPDFP-----VWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTD 112
Query: 162 -----ENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216
L DP++ V G TP + FRDP W G W ++G
Sbjct: 113 GGFTFTALPDPVI---VNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIG----R 165
Query: 217 EGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSIN 258
A Y S + WT + Y G ECPD+F ++ +
Sbjct: 166 LRYAAFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITAD 207
>pdb|1G01|A Chain A, Alkaline Cellulase K Catalytic Domain
pdb|1G0C|A Chain A, Alkaline Cellulase K Catalytic Domain-Cellobiose Complex
Length = 364
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 25/111 (22%)
Query: 261 IGVDTSVLNPGVKHVLKTSL-FSDKHDYYVLGTY------DPQMDIFSPDTDFHGNSNDL 313
IG + NP VK ++ + + +HD YV+ + DP+ D++S DF D
Sbjct: 77 IGENGYATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDPRADVYSGAYDFFEEIAD- 135
Query: 314 RYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQD------DIDKGWSGVQ 358
+ D KN ++W ANE + + +KGW V+
Sbjct: 136 -----------HYKDHPKNHYIIWELANEPSPNNNGGPGLTNDEKGWEAVK 175
>pdb|1QWL|A Chain A, Structure Of Helicobacter Pylori Catalase
pdb|1QWL|B Chain B, Structure Of Helicobacter Pylori Catalase
pdb|1QWM|A Chain A, Structure Of Helicobacter Pylori Catalase With Formic Acid
Bound
pdb|1QWM|B Chain B, Structure Of Helicobacter Pylori Catalase With Formic Acid
Bound
Length = 505
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Query: 205 RWRVLVGGQIDNEGMAFVYWSWDFIH-WTKLDHPLYSVQETGMWECPDIFPVSINGTIGV 263
+W++ + + + + + +D W D+PL V + + P+ + +
Sbjct: 257 KWKLSIQVMPEEDAKKYRFHPFDVTKIWYTQDYPLMEVGIVELNKNPENYFAEVEQAAFT 316
Query: 264 DTSVLNPGVKH----VLKTSLFS--DKHDYYVLGTYDPQMDIFSPDTDFHGNSND 312
+V+ PG+ + +L+ LFS D H Y LG PQ+ + P FH +S D
Sbjct: 317 PANVV-PGIGYSPDRMLQGRLFSYGDTHRYR-LGVNYPQIPVNKPRCPFHSSSRD 369
>pdb|2A9E|A Chain A, Helicobacter Pylori Catalase Compound I
pdb|2A9E|B Chain B, Helicobacter Pylori Catalase Compound I
pdb|2IQF|A Chain A, Crystal Structure Of Helicobacter Pylori Catalase Compound
I
pdb|2IQF|B Chain B, Crystal Structure Of Helicobacter Pylori Catalase Compound
I
Length = 505
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Query: 205 RWRVLVGGQIDNEGMAFVYWSWDFIH-WTKLDHPLYSVQETGMWECPDIFPVSINGTIGV 263
+W++ + + + + + +D W D+PL V + + P+ + +
Sbjct: 257 KWKLSIQVMPEEDAKKYRFHPFDVTKIWYTQDYPLXEVGIVELNKNPENYFAEVEQAAFT 316
Query: 264 DTSVLNPGVKH----VLKTSLFS--DKHDYYVLGTYDPQMDIFSPDTDFHGNSND 312
+V+ PG+ + +L+ LFS D H Y LG PQ+ + P FH +S D
Sbjct: 317 PANVV-PGIGYSPDRMLQGRLFSYGDTHRYR-LGVNYPQIPVNKPRCPFHSSSRD 369
>pdb|2X1I|A Chain A, Glycoside Hydrolase Family 77 4-Alpha-Glucanotransferase
From Thermus Brockianus
Length = 500
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 176 SGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAF----VYWSWDFIHW 231
G P + GV D F + W P RW VL + EG +F + + + H
Sbjct: 237 EGRPTVV--AGVPPDYFSETGQRWGNPLYRWEVL-----EEEGFSFWIARLRKALELFHL 289
Query: 232 TKLDHPLYSVQETGMWECPDIFPVSING 259
++DH + E WE P P ++ G
Sbjct: 290 VRIDH--FRGFEA-YWEIPASCPTAVEG 314
>pdb|2QJJ|A Chain A, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans
pdb|2QJJ|B Chain B, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans
pdb|2QJJ|C Chain C, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans
pdb|2QJJ|D Chain D, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans
pdb|2QJN|A Chain A, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans Complexed With Mg And
2-Keto-3-Deoxy-D-Gluconate
pdb|2QJN|B Chain B, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans Complexed With Mg And
2-Keto-3-Deoxy-D-Gluconate
pdb|2QJN|C Chain C, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans Complexed With Mg And
2-Keto-3-Deoxy-D-Gluconate
pdb|2QJN|D Chain D, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans Complexed With Mg And
2-Keto-3-Deoxy-D-Gluconate
Length = 402
Score = 28.1 bits (61), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 16/121 (13%)
Query: 197 TAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLD--HPLYSVQETGMWECPDIFP 254
T W A D L+ Q+ + A V + H ++ LY V+ TG D+ P
Sbjct: 266 TIWDAKD-----LIQNQLIDYIRATVVGAGGLTHLRRIADLASLYQVR-TGCHGATDLSP 319
Query: 255 VSINGTIGVDTSVLNPGVKHVLKTSLFSDK---HDYYVLGTYDPQMDIFSPDTDFHGNSN 311
V++ + DT V N G++ ++ + +D HDY+ + ++F +T HG
Sbjct: 320 VTMGCALHFDTWVPNFGIQEYMRHTEETDAVFPHDYWF-----EKGELFVGETPGHGVDI 374
Query: 312 D 312
D
Sbjct: 375 D 375
>pdb|2QJM|A Chain A, Crystal Structure Of The K271e Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|2QJM|B Chain B, Crystal Structure Of The K271e Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|2QJM|C Chain C, Crystal Structure Of The K271e Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|2QJM|D Chain D, Crystal Structure Of The K271e Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
Length = 402
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 16/121 (13%)
Query: 197 TAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLD--HPLYSVQETGMWECPDIFP 254
T W A D L+ Q+ + A V + H ++ LY V+ TG D+ P
Sbjct: 266 TIWDAED-----LIQNQLIDYIRATVVGAGGLTHLRRIADLASLYQVR-TGCHGATDLSP 319
Query: 255 VSINGTIGVDTSVLNPGVKHVLKTSLFSDK---HDYYVLGTYDPQMDIFSPDTDFHGNSN 311
V++ + DT V N G++ ++ + +D HDY+ + ++F +T HG
Sbjct: 320 VTMGCALHFDTWVPNFGIQEYMRHTEETDAVFPHDYWF-----EKGELFVGETPGHGVDI 374
Query: 312 D 312
D
Sbjct: 375 D 375
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.459
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,189,041
Number of Sequences: 62578
Number of extensions: 632850
Number of successful extensions: 1079
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1004
Number of HSP's gapped (non-prelim): 39
length of query: 360
length of database: 14,973,337
effective HSP length: 100
effective length of query: 260
effective length of database: 8,715,537
effective search space: 2266039620
effective search space used: 2266039620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)