Query 018161
Match_columns 360
No_of_seqs 233 out of 1488
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 06:39:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018161.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018161hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0228 Beta-fructofuranosidas 100.0 4.5E-83 9.7E-88 622.4 24.5 335 22-360 17-353 (571)
2 COG1621 SacC Beta-fructosidase 100.0 3.1E-77 6.7E-82 595.0 28.6 285 49-360 23-321 (486)
3 PF00251 Glyco_hydro_32N: Glyc 100.0 4E-73 8.6E-78 546.9 26.1 282 59-360 1-291 (308)
4 TIGR01322 scrB_fam sucrose-6-p 100.0 7.3E-71 1.6E-75 555.6 30.9 279 50-360 9-308 (445)
5 smart00640 Glyco_32 Glycosyl h 100.0 1.7E-68 3.6E-73 537.2 31.1 282 59-360 1-294 (437)
6 cd08996 GH32_B_Fructosidase Gl 100.0 4.8E-64 1E-68 480.5 32.5 267 65-360 1-279 (298)
7 cd08995 GH32_Aec43_like Glycos 100.0 2.6E-55 5.5E-60 416.8 28.9 257 68-360 1-269 (280)
8 cd08979 GH_J Glycosyl hydrolas 100.0 2.4E-40 5.1E-45 311.4 27.0 243 69-343 8-264 (276)
9 cd08772 GH43_62_32_68 Glycosyl 100.0 5.1E-36 1.1E-40 282.2 27.5 264 68-360 1-281 (286)
10 cd08997 GH68 Glycosyl hydrolas 99.9 9.4E-26 2E-30 218.8 24.0 193 69-280 9-255 (349)
11 cd08994 GH43_like_2 Glycosyl h 99.9 8.5E-24 1.9E-28 201.7 20.0 190 58-256 4-282 (291)
12 cd09004 GH43_bXyl Glycosyl hyd 99.9 1.4E-20 3E-25 178.3 19.5 191 64-291 5-197 (275)
13 cd08984 GH43_5 Glycosyl hydrol 99.9 4.6E-20 9.9E-25 176.7 20.1 162 67-256 79-246 (294)
14 cd08993 GH43_DUF377 Glycosyl h 99.8 3.5E-20 7.6E-25 175.1 18.3 149 69-237 2-157 (268)
15 cd08999 GH43_ABN_2 Glycosyl hy 99.8 1.1E-18 2.4E-23 165.8 21.4 185 65-281 6-199 (287)
16 cd08990 GH43_AXH_like Glycosyl 99.8 8E-18 1.7E-22 159.4 20.1 195 69-291 2-206 (274)
17 cd08978 GH_F Glycosyl hydrolas 99.7 1.2E-16 2.6E-21 149.6 20.1 191 69-291 2-201 (271)
18 cd08992 GH43_like_1 Glycosyl h 99.7 3.3E-16 7.1E-21 152.2 18.4 172 54-234 23-241 (349)
19 cd08991 GH43_bXyl_2 Glycosyl h 99.7 8.1E-16 1.7E-20 146.9 20.2 179 69-281 2-203 (294)
20 cd08984 GH43_5 Glycosyl hydrol 99.7 4.6E-15 9.9E-20 142.2 19.3 170 67-256 11-193 (294)
21 cd08998 GH43_ABN_1 Glycosyl hy 99.7 8.5E-15 1.8E-19 139.7 20.3 178 67-281 1-192 (288)
22 cd08985 GH43_6 Glycosyl hydrol 99.6 2E-13 4.3E-18 129.1 21.2 189 69-292 5-203 (265)
23 PF04616 Glyco_hydro_43: Glyco 99.5 1E-12 2.3E-17 124.4 21.4 182 65-281 8-199 (286)
24 cd09000 GH43_XYL_1 Glycosyl hy 99.5 5.2E-13 1.1E-17 127.4 19.3 178 65-281 6-196 (288)
25 cd09003 GH43_AXH_1 Glycosyl hy 99.5 8.6E-13 1.9E-17 127.6 19.7 185 65-280 7-214 (311)
26 PF04041 DUF377: Domain of unk 99.5 4.4E-13 9.5E-18 129.5 16.7 198 72-296 36-242 (312)
27 cd08983 GH43_4 Glycosyl hydrol 99.5 3.3E-12 7.1E-17 121.5 22.4 204 64-302 15-227 (276)
28 cd08988 GH43_ABN Glycosyl hydr 99.5 4E-12 8.7E-17 121.0 19.8 178 69-280 2-192 (279)
29 cd08981 GH43_2 Glycosyl hydrol 99.4 1.7E-11 3.7E-16 117.5 20.2 134 65-212 4-142 (291)
30 cd08979 GH_J Glycosyl hydrolas 99.4 6.4E-12 1.4E-16 118.0 15.6 137 65-213 64-209 (276)
31 cd08989 GH43_XYL Glycosyl hydr 99.3 8.5E-11 1.8E-15 111.3 18.5 173 65-281 6-189 (269)
32 cd08992 GH43_like_1 Glycosyl h 99.3 1.8E-10 3.9E-15 112.3 18.6 171 68-256 113-310 (349)
33 cd08993 GH43_DUF377 Glycosyl h 99.3 7E-11 1.5E-15 111.6 15.4 99 130-237 2-104 (268)
34 cd08986 GH43_7 Glycosyl hydrol 99.3 1.5E-10 3.2E-15 109.7 17.4 179 66-281 1-202 (269)
35 cd09001 GH43_XYL_2 Glycosyl hy 99.3 1.4E-10 3.1E-15 109.8 16.6 169 65-281 9-191 (269)
36 cd08980 GH43_1 Glycosyl hydrol 99.2 5E-10 1.1E-14 106.8 18.6 188 69-292 2-205 (288)
37 cd09002 GH43_XYL_3 Glycosyl hy 99.2 3.5E-10 7.5E-15 107.8 17.1 122 66-213 14-135 (280)
38 cd08982 GH43_3 Glycosyl hydrol 99.1 7.4E-09 1.6E-13 99.5 17.6 107 68-212 4-110 (295)
39 cd08987 GH62 Glycosyl hydrolas 99.0 1E-08 2.2E-13 96.8 17.0 202 60-303 14-230 (303)
40 PF02435 Glyco_hydro_68: Levan 99.0 1.5E-08 3.2E-13 100.3 17.4 193 60-256 49-309 (428)
41 COG2152 Predicted glycosylase 99.0 5.9E-09 1.3E-13 98.2 12.3 147 72-239 35-193 (314)
42 cd08995 GH32_Aec43_like Glycos 98.9 5.8E-08 1.3E-12 92.1 16.7 131 69-214 64-201 (280)
43 PF04041 DUF377: Domain of unk 98.9 1.5E-08 3.2E-13 98.1 11.7 105 125-238 29-136 (312)
44 cd08994 GH43_like_2 Glycosyl h 98.8 3.8E-08 8.3E-13 93.9 12.2 108 68-181 81-198 (291)
45 cd08999 GH43_ABN_2 Glycosyl hy 98.8 1.9E-07 4.1E-12 88.6 15.8 157 67-236 62-227 (287)
46 cd08978 GH_F Glycosyl hydrolas 98.8 2.8E-07 6.1E-12 86.1 16.1 156 64-234 56-215 (271)
47 cd08991 GH43_bXyl_2 Glycosyl h 98.7 1.5E-06 3.3E-11 82.9 20.3 155 65-234 53-227 (294)
48 cd08990 GH43_AXH_like Glycosyl 98.7 7.5E-07 1.6E-11 84.3 15.5 152 65-238 62-220 (274)
49 cd08772 GH43_62_32_68 Glycosyl 98.7 8E-07 1.7E-11 83.4 15.4 157 65-234 58-224 (286)
50 cd08983 GH43_4 Glycosyl hydrol 98.6 5.1E-07 1.1E-11 86.0 13.5 89 177-281 5-99 (276)
51 cd08996 GH32_B_Fructosidase Gl 98.6 9.2E-07 2E-11 84.6 13.1 129 74-214 69-202 (298)
52 cd08986 GH43_7 Glycosyl hydrol 98.5 1.1E-06 2.5E-11 83.2 12.5 74 192-281 2-98 (269)
53 cd08998 GH43_ABN_1 Glycosyl hy 98.4 1.5E-05 3.3E-10 75.9 16.7 154 64-232 55-217 (288)
54 TIGR01322 scrB_fam sucrose-6-p 98.4 6.2E-06 1.4E-10 83.7 13.6 130 74-213 92-225 (445)
55 cd08981 GH43_2 Glycosyl hydrol 98.3 9.3E-06 2E-10 77.9 13.4 77 190-281 4-87 (291)
56 COG2152 Predicted glycosylase 98.3 9.5E-06 2.1E-10 76.8 11.8 104 127-239 30-140 (314)
57 cd09004 GH43_bXyl Glycosyl hyd 98.3 6.7E-05 1.4E-09 71.0 17.7 143 67-237 66-214 (275)
58 cd09002 GH43_XYL_3 Glycosyl hy 98.3 2.1E-05 4.7E-10 74.9 14.1 78 177-281 7-84 (280)
59 cd08997 GH68 Glycosyl hydrolas 98.2 5.5E-05 1.2E-09 74.2 15.3 149 76-233 80-284 (349)
60 cd08989 GH43_XYL Glycosyl hydr 98.2 1.4E-05 3E-10 75.7 10.4 78 178-281 1-87 (269)
61 smart00640 Glyco_32 Glycosyl h 98.1 4E-05 8.6E-10 77.7 12.2 131 74-213 75-215 (437)
62 cd08985 GH43_6 Glycosyl hydrol 98.0 0.00058 1.3E-08 64.6 17.3 146 66-237 64-215 (265)
63 PF04616 Glyco_hydro_43: Glyco 97.9 0.00014 3.1E-09 68.7 12.8 155 52-214 104-261 (286)
64 cd08988 GH43_ABN Glycosyl hydr 97.9 0.00047 1E-08 65.6 16.2 150 67-233 57-219 (279)
65 COG3507 XynB Beta-xylosidase [ 97.9 0.00021 4.6E-09 72.8 13.2 163 68-256 31-215 (549)
66 PF03664 Glyco_hydro_62: Glyco 97.9 0.0017 3.8E-08 59.8 17.7 188 60-285 16-211 (271)
67 cd09003 GH43_AXH_1 Glycosyl hy 97.8 0.0019 4.2E-08 62.5 18.5 147 69-238 80-248 (311)
68 cd09001 GH43_XYL_2 Glycosyl hy 97.8 0.00067 1.4E-08 64.2 15.0 134 67-233 76-212 (269)
69 cd08980 GH43_1 Glycosyl hydrol 97.8 0.0014 3.1E-08 62.4 16.9 142 67-226 55-209 (288)
70 PF13088 BNR_2: BNR repeat-lik 97.7 0.0005 1.1E-08 64.5 12.9 150 66-234 47-199 (275)
71 cd09000 GH43_XYL_1 Glycosyl hy 97.6 0.0026 5.6E-08 60.6 15.5 146 64-234 65-219 (288)
72 cd00260 Sialidase Sialidases o 97.5 0.0039 8.5E-08 60.8 16.3 152 65-234 74-238 (351)
73 PF13088 BNR_2: BNR repeat-lik 97.2 0.011 2.5E-07 55.3 14.9 161 78-256 1-168 (275)
74 cd08987 GH62 Glycosyl hydrolas 97.1 0.014 3E-07 55.8 14.0 143 68-234 79-230 (303)
75 PF00251 Glyco_hydro_32N: Glyc 97.1 0.013 2.8E-07 56.6 14.1 114 134-256 15-138 (308)
76 cd08982 GH43_3 Glycosyl hydrol 96.9 0.012 2.5E-07 56.7 11.7 80 127-212 159-239 (295)
77 cd00260 Sialidase Sialidases o 96.2 1.3 2.8E-05 43.0 21.1 146 96-256 45-207 (351)
78 PF13859 BNR_3: BNR repeat-lik 94.7 0.24 5.2E-06 48.1 9.9 144 69-236 62-214 (310)
79 COG3507 XynB Beta-xylosidase [ 93.5 1.6 3.5E-05 45.1 13.4 150 62-229 86-243 (549)
80 COG3940 Predicted beta-xylosid 93.0 0.65 1.4E-05 42.4 8.8 101 74-182 138-247 (324)
81 COG1621 SacC Beta-fructosidase 91.2 6.2 0.00013 40.7 14.4 96 137-240 50-153 (486)
82 PF02435 Glyco_hydro_68: Levan 90.6 8.6 0.00019 38.9 14.4 129 77-214 143-320 (428)
83 PF13810 DUF4185: Domain of un 88.6 25 0.00055 34.2 17.2 156 66-234 93-272 (316)
84 PTZ00334 trans-sialidase; Prov 87.2 6.7 0.00015 42.6 11.6 88 131-236 263-351 (780)
85 PF03664 Glyco_hydro_62: Glyco 85.6 31 0.00066 32.4 13.5 70 69-149 78-153 (271)
86 PF13810 DUF4185: Domain of un 82.4 7.7 0.00017 37.7 8.9 94 136-235 102-210 (316)
87 KOG0228 Beta-fructofuranosidas 73.2 20 0.00044 36.9 8.8 90 137-235 68-167 (571)
88 COG3940 Predicted beta-xylosid 71.6 85 0.0018 29.0 16.3 171 68-254 14-193 (324)
89 PF07172 GRP: Glycine rich pro 53.3 10 0.00023 30.2 2.1 15 9-23 1-15 (95)
90 PF02012 BNR: BNR/Asp-box repe 38.3 25 0.00055 17.2 1.3 11 160-174 2-12 (12)
91 PRK13684 Ycf48-like protein; P 30.5 5.1E+02 0.011 25.1 12.7 15 221-235 153-168 (334)
92 smart00815 AMA-1 Apical membra 25.3 78 0.0017 29.4 3.3 63 189-256 120-197 (240)
93 smart00602 VPS10 VPS10 domain. 25.0 8.4E+02 0.018 25.9 11.6 27 208-234 181-207 (612)
94 PF15240 Pro-rich: Proline-ric 24.7 43 0.00093 29.8 1.5 19 14-32 1-19 (179)
95 PTZ00449 104 kDa microneme/rho 23.3 2.7E+02 0.0058 29.3 6.9 53 77-148 57-109 (943)
96 PF05777 Acp26Ab: Drosophila a 20.3 67 0.0015 24.7 1.6 26 50-76 39-64 (90)
No 1
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.5e-83 Score=622.36 Aligned_cols=335 Identities=55% Similarity=0.977 Sum_probs=302.9
Q ss_pred HHHhcCCccccccccccccccccccCCCCCCCCccceeeeCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEE
Q 018161 22 LLIANGAHQSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAH 101 (360)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~H~~p~~gw~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgh 101 (360)
+++.+......+.......++..+.+...+.++||.|||+|++|||||| +|++|+||||||+||+++.|| +.+|||
T Consensus 17 ~~~~~~vk~~da~~~~~~~l~~~s~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP~gavwg-~ivWGH 92 (571)
T KOG0228|consen 17 LNLTNYVKGLDAFHQNYAGLQSESPSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNPKGAVWG-NIVWGH 92 (571)
T ss_pred HhhhhhhhhhhhhhhhhhhhcccCccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCCCCceee-eeEeee
Confidence 3333433333344333344544445578899999999999999999998 799999999999999999999 899999
Q ss_pred EEeCCcccceecccccCCCCccCCCCeEeccEEEcCCCceEEEEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCcee
Q 018161 102 SVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVM 181 (360)
Q Consensus 102 a~S~Dlv~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi 181 (360)
|+|+||+||+.+|+||.|++.+|..|||||||+++++|+++++|||.....+|.|.+|..+|.+||.|+.|.|.+++|++
T Consensus 93 avSkDLinW~~lp~Ai~Ps~~~ding~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~ 172 (571)
T KOG0228|consen 93 AVSKDLINWEALPPAIAPSEWFDINGCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFM 172 (571)
T ss_pred ecchhhccccccCcccCCCCccccCccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceee
Confidence 99999999999999999999999999999999999999999999999888889999999999999999999999999999
Q ss_pred cCC--CCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCCccEEEEEEeCCCCCcEEcccccccCCCCCceeeceEEEeccCC
Q 018161 182 TPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSING 259 (360)
Q Consensus 182 ~~p--~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g 259 (360)
.++ .+++...||||+++|.+++|+|+|++|+..+++|.+.+|+|+||++|+..+.|+++.+.++||||||||++.++|
T Consensus 173 ~p~~V~~in~s~FRDPttaW~~~dgkWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffpVs~tg 252 (571)
T KOG0228|consen 173 KPDKVLGINSSQFRDPTTAWFGQDGKWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFPVSITG 252 (571)
T ss_pred ccccccCCChhhccCCceeeecCCCcEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCcEEecccC
Confidence 877 677889999999999999999999999998888999999999999999999999998899999999999999999
Q ss_pred ccceeeccCCCCceeEEEEeeCCCceeEEEEEEEeCCCCeeccCCCCCCCCCceeeccCCCcccceeecCCCCcEEEEEe
Q 018161 260 TIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAW 339 (360)
Q Consensus 260 ~~g~~~s~~~~~~~~vl~~s~~~~~~~~Y~vG~~d~~~~~f~~~~~~~~~~~~~~lD~G~fYA~qtf~d~~~gr~i~~gW 339 (360)
++|++++..+...|||++.|..+++.++|.||+||+++.+|+|++.+.+.....+.|+|.|||+|||.|..++|||+|||
T Consensus 253 ~~g~d~s~~~~~nkhvlkasl~gt~~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~rrIlwgW 332 (571)
T KOG0228|consen 253 TDGLDWSLFGSINKHVLKASLGGTSNDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKGRRILWGW 332 (571)
T ss_pred CCCceEEEeccccccccccccCCceeEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCCcEEEEEe
Confidence 99999887766669999999988899999999999998999999887765556689999999999999998999999999
Q ss_pred cCCCCCCCCCcCCCCeeeecC
Q 018161 340 ANESDSTQDDIDKGWSGVQVI 360 (360)
Q Consensus 340 ~~~~~~~~~~~~~gW~g~ltl 360 (360)
++|+++..+...+||+|.|||
T Consensus 333 a~es~~~~dd~~kgw~g~qti 353 (571)
T KOG0228|consen 333 ASESDYTNDDPTKGWRGLQTI 353 (571)
T ss_pred cccCcccccchhccccccccc
Confidence 999999988899999999986
No 2
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-77 Score=595.03 Aligned_cols=285 Identities=38% Similarity=0.718 Sum_probs=250.0
Q ss_pred CCCCCCccceeeeCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCCccCCCCe
Q 018161 49 PANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSC 128 (360)
Q Consensus 49 ~~~~~~rp~~H~~p~~gw~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~gv 128 (360)
....+|||.|||+|+.||||||||++|++|+|||||||+|.++.|| +++||||+|+|||||+++|+||.|+.++|.+||
T Consensus 23 ~~~~~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g-~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g~ 101 (486)
T COG1621 23 VAKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHG-PKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGC 101 (486)
T ss_pred ccCCCCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCC-CceeeeeccCCcccceECCceecCCCccccCCc
Confidence 3568999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred EeccEEEcCCCceEEEEEeeeC----CCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCC
Q 018161 129 WSGSVTILPGDKPFILYTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG 204 (360)
Q Consensus 129 ~sGs~v~~~dg~~~l~YTg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g 204 (360)
||||||+ .+|+..+||||+.+ .+.+.|++|+|+|+ .+|+|+.++||+..|+++ +.+||||||+|+ +++
T Consensus 102 ySGSAV~-~~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w~-~~~ 173 (486)
T COG1621 102 YSGSAVV-DDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKVVWD-EGG 173 (486)
T ss_pred eeeeEEE-eCCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCccccc-CCC
Confidence 9999998 89999999999875 36789999999996 588997678999888886 789999999897 889
Q ss_pred eEEEEEeeee-CCccEEEEEEeCCCCCcEEccccccc-CCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeC-
Q 018161 205 RWRVLVGGQI-DNEGMAFVYWSWDFIHWTKLDHPLYS-VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF- 281 (360)
Q Consensus 205 ~~~M~~g~~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~-~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~- 281 (360)
+|+|++||+. +..|+|+||+|+||++|++.|++... ...++||||||||+|+. ...+. +|++..+.+
T Consensus 174 ~~~~mlgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~~--~~~~~--------~~pqg~~~~~ 243 (486)
T COG1621 174 KWWMMLGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDG--EDVLL--------FWPQGLSING 243 (486)
T ss_pred cEEEEEEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEecC--cCceE--------EcceeeecCC
Confidence 9999999987 56899999999999999999987666 44567999999999994 34443 455555543
Q ss_pred ----CCceeEEEEEEEeCCCCeeccCCCCCCCCCceeeccCC-CcccceeecCCCCcEEEEEecCCCCCC--CCCcCCCC
Q 018161 282 ----SDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDST--QDDIDKGW 354 (360)
Q Consensus 282 ----~~~~~~Y~vG~~d~~~~~f~~~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~gr~i~~gW~~~~~~~--~~~~~~gW 354 (360)
+...+.|++|+||++ +|.+... .+++||+|+ |||+|||.++ ++|||++|||++|+.. .|+..+||
T Consensus 244 ~~~~n~~~~~Y~vG~~dg~--~f~~~~~-----~~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~~w 315 (486)
T COG1621 244 GEYDNIYQSGYFVGDFDGK--EFKLDDG-----QFRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDEGW 315 (486)
T ss_pred CcCCCcceeEEEEEeeccc--eeEecCC-----CceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCccccCc
Confidence 356789999999985 5665543 257999996 9999999984 8999999999999986 67888999
Q ss_pred eeeecC
Q 018161 355 SGVQVI 360 (360)
Q Consensus 355 ~g~ltl 360 (360)
+|||||
T Consensus 316 ~~~mTl 321 (486)
T COG1621 316 RGAMTL 321 (486)
T ss_pred Ccccee
Confidence 999996
No 3
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=100.00 E-value=4e-73 Score=546.89 Aligned_cols=282 Identities=43% Similarity=0.854 Sum_probs=235.5
Q ss_pred eeeCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCCccCCCCeEeccEEEcCC
Q 018161 59 HFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPG 138 (360)
Q Consensus 59 H~~p~~gw~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~gv~sGs~v~~~d 138 (360)
||+|+.||||||||++|++|+||||||++|.++.|| +++||||+|+|||||+++++||.|+..+|+.||||||+++ .+
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g-~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~-~~ 78 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWG-NMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVV-DD 78 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS--SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEE-ET
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccc-eeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEE-EC
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999 56
Q ss_pred CceEEEEEeeeCCCceeEEEEEecCCCCCCcceEEEec-CCceecC-CCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCC
Q 018161 139 DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFS-GNPVMTP-PNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216 (360)
Q Consensus 139 g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~-~~Pvi~~-p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~ 216 (360)
++++|||||+...+.+.|++|+|+|.+ ++|+|++ ++|||.. |++ ...+||||+|+|+ ++++|+|++|++...
T Consensus 79 ~~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~-~~~~~~m~~g~~~~~ 152 (308)
T PF00251_consen 79 DNLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWR-EDGRWYMLLGAGRDG 152 (308)
T ss_dssp TCEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEE-CTTEEEEEEEEEETT
T ss_pred CEEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEe-cCCEEEEEEeccccC
Confidence 699999999987668999999996654 7999987 4999974 444 6799999998788 569999999999888
Q ss_pred ccEEEEEEeCCCCCcEEcccccccCC-CCCceeeceEEEeccCCccceeeccCCCCceeEEEEee----CCCceeEEEEE
Q 018161 217 EGMAFVYWSWDFIHWTKLDHPLYSVQ-ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL----FSDKHDYYVLG 291 (360)
Q Consensus 217 ~G~i~ly~S~Dl~~W~~~~~~l~~~~-~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~----~~~~~~~Y~vG 291 (360)
.|+|++|+|+||++|++.+.+..... .+.|||||+||+|+..+... ...+|||++|. .....++|+||
T Consensus 153 ~g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~~~-------~~~~~vl~~s~~g~~~~~~~~~Y~vG 225 (308)
T PF00251_consen 153 RGCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGDGT-------GKWVWVLIFSPQGIEDNGHGTYYMVG 225 (308)
T ss_dssp EEEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTSSS-------EEEEEEEEEEEESTTTTTTEEEEEEE
T ss_pred cceEEEEEcCCcccCceeCcccccccccccccccceEEEECCccccc-------ceEEEEEEecccccccccccceEEeE
Confidence 89999999999999999987665533 47899999999999642100 12357899988 35678999999
Q ss_pred EEeCCCCeeccCCCCCCCCCceeeccCC-CcccceeecCCCCcEEEEEecCCCCCCCC-CcCCCCeeeecC
Q 018161 292 TYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQD-DIDKGWSGVQVI 360 (360)
Q Consensus 292 ~~d~~~~~f~~~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~gr~i~~gW~~~~~~~~~-~~~~gW~g~ltl 360 (360)
+||.++++|+++.. ..+++|+|+ |||+|+|.++..+||||||||++++.... ..+.||+|+|||
T Consensus 226 ~~d~~~~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lsl 291 (308)
T PF00251_consen 226 DFDFDGGTFTPDDS-----SFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSL 291 (308)
T ss_dssp EEETTTTEEEESST-----TSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE--
T ss_pred EecCCCCeeeeecc-----ccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEe
Confidence 99877789987621 368999997 99999999975459999999999987522 236899999996
No 4
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=100.00 E-value=7.3e-71 Score=555.63 Aligned_cols=279 Identities=34% Similarity=0.660 Sum_probs=239.3
Q ss_pred CCCCCccceeeeCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCCccCCCCeE
Q 018161 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCW 129 (360)
Q Consensus 50 ~~~~~rp~~H~~p~~gw~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~gv~ 129 (360)
.+++|||+|||+|+.||||||||++|++|+||||||++|.++.|| +++||||+|+|||||+++|+||.|+..+|..|||
T Consensus 9 ~~~~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g-~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~ 87 (445)
T TIGR01322 9 LQSEWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHG-LKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCY 87 (445)
T ss_pred ccCCcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccC-ceEEEEEECCCccccEECCccCcCCCcccCCceE
Confidence 457899999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred eccEEEcCCCceEEEEEeeeC----CCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCe
Q 018161 130 SGSVTILPGDKPFILYTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205 (360)
Q Consensus 130 sGs~v~~~dg~~~l~YTg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~ 205 (360)
||||++ ++|+++|||||+.. .+.+.|++|+|+|+ .+|+|. .+|||.+++.....+||||+| |+ .+|+
T Consensus 88 sGsav~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~-~~pvi~~~~~~~~~~fRDP~V-~~-~~g~ 158 (445)
T TIGR01322 88 SGSAVD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKF-GIVVIELPPAGYTAHFRDPKV-WK-HNGH 158 (445)
T ss_pred ECeEEe-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEEC-CCceEeCCCCCCcCcCCCCcE-Ee-ECCE
Confidence 999998 89999999999753 24678999999986 589997 459997544434578999996 54 4789
Q ss_pred EEEEEeeee-CCccEEEEEEeCCCCCcEEcccccccC-----CCCCceeeceEEEeccCCccceeeccCCCCceeEEEEe
Q 018161 206 WRVLVGGQI-DNEGMAFVYWSWDFIHWTKLDHPLYSV-----QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTS 279 (360)
Q Consensus 206 ~~M~~g~~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~~-----~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s 279 (360)
|+|++|++. +..|++.+|+|+||++|++.+.+.... ..+.|||||+||+|+ | ||||++|
T Consensus 159 ~~M~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~--~-------------k~vL~~s 223 (445)
T TIGR01322 159 WYMVIGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLD--G-------------QDVLLFS 223 (445)
T ss_pred EEEEEEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEEC--C-------------cEEEEEe
Confidence 999999876 456899999999999999997665432 245699999999997 4 6677776
Q ss_pred eCC----------CceeEEEEEEEeCCCCeeccCCCCCCCCCceeeccCC-CcccceeecCCCCcEEEEEecCCCCCCCC
Q 018161 280 LFS----------DKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQD 348 (360)
Q Consensus 280 ~~~----------~~~~~Y~vG~~d~~~~~f~~~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~gr~i~~gW~~~~~~~~~ 348 (360)
.++ ..+++|++|+||.++.+|++++. .+.+|+|. |||+|||.++ +|||||||||++++...+
T Consensus 224 ~~g~~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~~ 296 (445)
T TIGR01322 224 PQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDYP 296 (445)
T ss_pred ccccCcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCCC
Confidence 532 23478999999987789987643 36899995 9999999885 799999999999988777
Q ss_pred CcCCCCeeeecC
Q 018161 349 DIDKGWSGVQVI 360 (360)
Q Consensus 349 ~~~~gW~g~ltl 360 (360)
+.+.||+|+|||
T Consensus 297 ~~~~~W~g~lsl 308 (445)
T TIGR01322 297 TDRDGWAHCMTL 308 (445)
T ss_pred CccCCccccccc
Confidence 778899999996
No 5
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=100.00 E-value=1.7e-68 Score=537.22 Aligned_cols=282 Identities=46% Similarity=0.878 Sum_probs=233.9
Q ss_pred eeeCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCCccCCCCeEeccEEEcCC
Q 018161 59 HFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPG 138 (360)
Q Consensus 59 H~~p~~gw~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~gv~sGs~v~~~d 138 (360)
||+|+.||||||||++|++|+||||||++|.++.|| +++|+||+|+||+||+++++||.|+..+|+.|||||||++ .+
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g-~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~-~~ 78 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWG-NIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVI-DP 78 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCC-CeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEE-CC
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999998 67
Q ss_pred CceEEEEEeeeCC------CceeE-EEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEe
Q 018161 139 DKPFILYTGIDAS------GQQVQ-NLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211 (360)
Q Consensus 139 g~~~l~YTg~~~~------~~~~q-~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g 211 (360)
|++++||||.... ..+.| ++|.|+|+ .+|+|++++|||.++++....+||||+|+|+ ++|+|||++|
T Consensus 79 ~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~-----~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g 152 (437)
T smart00640 79 GNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLG-----GTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIG 152 (437)
T ss_pred CceEEEEcCCcccccccCcccEEEEEEEECCCC-----CeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEE
Confidence 8899999997421 12333 45555554 7999987799997655556789999998776 4479999999
Q ss_pred eee-CCccEEEEEEeCCCCCcEEccccccc--CCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeCCCceeEE
Q 018161 212 GQI-DNEGMAFVYWSWDFIHWTKLDHPLYS--VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYY 288 (360)
Q Consensus 212 ~~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~--~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~~~~~~~Y 288 (360)
++. +.+|+|++|+|+||++|++.+.++.. ...+.|||||+||+|+++| .+.||||++|.++...++|
T Consensus 153 ~~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y 222 (437)
T smart00640 153 ASDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYY 222 (437)
T ss_pred EEecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEE
Confidence 876 56799999999999999999876543 2345899999999998654 1359999999987778999
Q ss_pred EEEEEeCCCCeeccCCCCCCCCCceeeccCC-CcccceeecCCCCcEEEEEecCCCCCCCC-CcCCCCeeeecC
Q 018161 289 VLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQD-DIDKGWSGVQVI 360 (360)
Q Consensus 289 ~vG~~d~~~~~f~~~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~gr~i~~gW~~~~~~~~~-~~~~gW~g~ltl 360 (360)
.+|+++++ .+|+|+... .....++||+|+ |||+|+|.+++.+||||||||++++.... ....||+|+|||
T Consensus 223 ~~G~~~g~-~~f~~~~~~-~~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tl 294 (437)
T smart00640 223 FVGYFDGS-DQFTPDDPE-DVGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSL 294 (437)
T ss_pred EEEEEcCc-eeEeECCcc-ccCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCcccccee
Confidence 99999863 479887542 112345899995 99999999864459999999999974221 222899999996
No 6
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=100.00 E-value=4.8e-64 Score=480.48 Aligned_cols=267 Identities=39% Similarity=0.780 Sum_probs=227.7
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCCccCCCCeEeccEEEcCCCceEEE
Q 018161 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFIL 144 (360)
Q Consensus 65 gw~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~~l~ 144 (360)
||||||||++|++|+||||||++|.++.|| +++||||+|+||+||+++++||.|+..+|..||||||++++.+|+++||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~-~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~ 79 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWG-NMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLF 79 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCC-CcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEE
Confidence 799999999999999999999999999999 9999999999999999999999998888999999999998444999999
Q ss_pred EEeeeC---CCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeee-CCccEE
Q 018161 145 YTGIDA---SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DNEGMA 220 (360)
Q Consensus 145 YTg~~~---~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~-~~~G~i 220 (360)
|||... .+.+.|++|+|+|.+ ++|+|...+|++.+ +.....+||||+|++. +|+|+|+++++. +..|+|
T Consensus 80 YTg~~~~~~~~~~~~~lA~S~ddg----~~w~k~~~~~~~~~-~~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~i 152 (298)
T cd08996 80 YTGNVKLDGGRRQTQCLAYSTDDG----RTFTKYEGNPVIPP-PDGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRI 152 (298)
T ss_pred EeceeCCCCCceEEEEEEEEcCCC----CEEEECCCCceEcC-CCCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcEE
Confidence 999874 467999999999532 79999888888863 2335679999997665 599999999886 457899
Q ss_pred EEEEeCCCCCcEEccccc-ccCCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeCC------CceeEEEEEEE
Q 018161 221 FVYWSWDFIHWTKLDHPL-YSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS------DKHDYYVLGTY 293 (360)
Q Consensus 221 ~ly~S~Dl~~W~~~~~~l-~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~~------~~~~~Y~vG~~ 293 (360)
.+|+|+||++|++.+.+. .....+.|||||+||+|+++ .||||++|.+. ...+.|++|++
T Consensus 153 ~ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~~-------------~k~vL~~s~~~~~~~~~~~~~~y~~G~~ 219 (298)
T cd08996 153 LLYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDVE-------------GKWVLIFSPQGLEPEGNGSGTGYLVGDF 219 (298)
T ss_pred EEEECCCCCCCEEcceecccCCCccceEeCCcEEEECCC-------------CeEEEEECCCCCCCCCCccceEEEEEEE
Confidence 999999999999986652 33445679999999999842 38999998764 25679999999
Q ss_pred eCCCCeeccCCCCCCCCCceeeccCC-CcccceeecCCCCcEEEEEecCCCCCCCCCcCCCCeeeecC
Q 018161 294 DPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQVI 360 (360)
Q Consensus 294 d~~~~~f~~~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltl 360 (360)
++. .|+++.. ..++||+|+ |||+|+|.++ ++|+||||||++++...+..+.||+|+|||
T Consensus 220 ~~~--~~~~~~~-----~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~ 279 (298)
T cd08996 220 DGT--TFTFDHT-----EFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTL 279 (298)
T ss_pred ECC--CCeEecC-----CceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEe
Confidence 974 5655411 257899995 9999999986 799999999999998877889999999986
No 7
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=100.00 E-value=2.6e-55 Score=416.82 Aligned_cols=257 Identities=26% Similarity=0.461 Sum_probs=213.6
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCC--CCcceEEEEEeCCcccceecccccCCC-CccCCCCeEeccEEEcCCCceEEE
Q 018161 68 NDPNGPMYYKGVYHLFYQYNPLGPLF--GDKMIWAHSVSYDLINWIHLSHALCPS-GPYDINSCWSGSVTILPGDKPFIL 144 (360)
Q Consensus 68 nDPnG~~~~~G~YHlFyq~~P~~~~~--g~~~~Wgha~S~Dlv~W~~~~~al~P~-~~~d~~gv~sGs~v~~~dg~~~l~ 144 (360)
.||. ++|++|+||||||++|.+..| + .++|+||+|+||+||+++++||.|. ..++..|||+||+++ .+|+++||
T Consensus 1 ~d~~-~~~~~G~yhlfyq~~p~~~~~~~~-~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~ 77 (280)
T cd08995 1 GDPM-PFYDDGTFHIFYLHDPRNGPPEGL-RHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAF 77 (280)
T ss_pred CCcc-ceEECCEEEEEEEcCCCCCCcccC-CceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEE
Confidence 4886 799999999999999999888 8 9999999999999999999999884 567789999999998 78999999
Q ss_pred EEeeeCC--CceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeee-----CCc
Q 018161 145 YTGIDAS--GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----DNE 217 (360)
Q Consensus 145 YTg~~~~--~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~-----~~~ 217 (360)
|||+... ..+.|++|+|+|+ ++|+|...+||+..+.++...+||||+|++++.+|+|+|+++++. +..
T Consensus 78 YTg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~ 152 (280)
T cd08995 78 YTGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRR 152 (280)
T ss_pred EEEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCC
Confidence 9998652 4678999999986 799998778888755555667899999766544799999999875 356
Q ss_pred cEEEEEEeCCCCCcEEcccccccCCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeCC-CceeEEEEEEEeCC
Q 018161 218 GMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS-DKHDYYVLGTYDPQ 296 (360)
Q Consensus 218 G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~~-~~~~~Y~vG~~d~~ 296 (360)
|+|.+|+|+||++|++.+. +.......|||||++|+++ | +|||++|.+. .....|.+|+-.
T Consensus 153 g~i~~~~S~Dl~~W~~~~~-~~~~~~~~~~E~P~l~~~~--g-------------~~~L~~s~~~~~~~~~Y~~~~~~-- 214 (280)
T cd08995 153 GCIALFTSKDLKNWEYEEP-FYAPGLYFMPECPDLFKMG--D-------------WWYLVYSEFSENRKTHYRVSKSP-- 214 (280)
T ss_pred eEEEEEEeCCcCcceecCc-eecCCCcceeecceEEEEC--C-------------EEEEEEEeccCCCcEEEEEeCCC--
Confidence 8999999999999998854 4444456799999999997 4 7899988753 456789999622
Q ss_pred CCeeccCCCCCCCCCceeeccCC-CcccceeecCCCCcEEEEEecCCCCCCCCCcCCCCeeeecC
Q 018161 297 MDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQVI 360 (360)
Q Consensus 297 ~~~f~~~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltl 360 (360)
.+.|.... ...|| |. |||+|+|.++ |||||||||++++...++.+.||+||||+
T Consensus 215 ~g~~~~~~-------~~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~~ 269 (280)
T cd08995 215 FGPWRAPD-------DDTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLVV 269 (280)
T ss_pred CCCeEcCC-------cCccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEEe
Confidence 24554322 13589 85 9999999985 99999999999998888888999999985
No 8
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=100.00 E-value=2.4e-40 Score=311.40 Aligned_cols=243 Identities=28% Similarity=0.389 Sum_probs=191.4
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceeccccc--CCCCccCCCCeEeccEEEcCCCceEEEEE
Q 018161 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL--CPSGPYDINSCWSGSVTILPGDKPFILYT 146 (360)
Q Consensus 69 DPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al--~P~~~~d~~gv~sGs~v~~~dg~~~l~YT 146 (360)
||..++ |+||||||++|.+..|+....|+||+|+||+||++.+.+| .+...+|..+|++|+++...+|+++||||
T Consensus 8 ~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt 84 (276)
T cd08979 8 NPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYT 84 (276)
T ss_pred CCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEEe
Confidence 555443 8899999999998765525668999999999999999887 55667888999999999844499999999
Q ss_pred eeeC--CCceeEEEEEecCCCCCCcceEEEecCCcee-----cCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeee-CCcc
Q 018161 147 GIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVM-----TPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DNEG 218 (360)
Q Consensus 147 g~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi-----~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~-~~~G 218 (360)
+... ...+.|++|+|+|+ .+|+|...+|++ ..+.......+|||+|++.+.+|+|+|++++.. ...+
T Consensus 85 ~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~ 159 (276)
T cd08979 85 GYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERG 159 (276)
T ss_pred cccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCc
Confidence 9873 45788999999996 799997666643 222333457899999766533399999999875 3568
Q ss_pred EEEEEEeCCCCCcEEcccc--cccCCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeCC-CceeEEEEEEEeC
Q 018161 219 MAFVYWSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS-DKHDYYVLGTYDP 295 (360)
Q Consensus 219 ~i~ly~S~Dl~~W~~~~~~--l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~~-~~~~~Y~vG~~d~ 295 (360)
+|.+|+|+|+++|++.+.+ ........++|||++|+++ | +|+|+++... ...+.|.+|.++.
T Consensus 160 ~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~--g-------------~~~l~~~~~~~~~~~~y~vg~~~~ 224 (276)
T cd08979 160 AIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID--G-------------RWYLLYSGRNEDAKTGYRVGTALF 224 (276)
T ss_pred EEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC--C-------------EEEEEEEecCccCCccEEEEeccc
Confidence 8999999999999998654 2233346799999999997 4 8999988753 5678899999765
Q ss_pred CCCeeccCCCCCCCCCceeeccCC-CcccceeecCCCCcEEEEEecCCC
Q 018161 296 QMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANES 343 (360)
Q Consensus 296 ~~~~f~~~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~gr~i~~gW~~~~ 343 (360)
..++|.. ...+|.|. |||+|++.+.+++|++++|||+++
T Consensus 225 --~~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 225 --GPGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred --CCccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 3455532 24688895 999999987546899999999987
No 9
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=100.00 E-value=5.1e-36 Score=282.20 Aligned_cols=264 Identities=28% Similarity=0.412 Sum_probs=199.1
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccC----CCCccCCCCeEeccEEEcCCCceEE
Q 018161 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC----PSGPYDINSCWSGSVTILPGDKPFI 143 (360)
Q Consensus 68 nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~----P~~~~d~~gv~sGs~v~~~dg~~~l 143 (360)
|||+ +++++|+||||||++|.+ + ..+|+|++|+||+||++++.+|. |....+..++|+|+++...+|+++|
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~---~-~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l 75 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKN---G-NPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYL 75 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCC---C-CceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEE
Confidence 7999 899999999999999875 5 78999999999999999998884 6666778899999999844499999
Q ss_pred EEEeeeC-CCceeEEEEEecCCCCCCcceEEEecCCceecC-CCCCCCcCcCCCeEEEEcCCCeEEEEEeeee-CCccEE
Q 018161 144 LYTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP-PNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DNEGMA 220 (360)
Q Consensus 144 ~YTg~~~-~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~-p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~-~~~G~i 220 (360)
+||+... ...+++++|+|+|+. ..|++...+|++.. +.......+|||+|+++ ++|+|||++++.. ...+.|
T Consensus 76 ~yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d-~dG~~y~~~~~~~~~~~~~i 150 (286)
T cd08772 76 YYTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVFED-DDGKWYLVFGSGDHHNFGGI 150 (286)
T ss_pred EEEeecCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEEEc-CCCCEEEEEccccCCCCCeE
Confidence 9999864 356889999999874 35676545566532 22234568999996544 6699999998765 345779
Q ss_pred EEEEeCCCCCcEEcccc--cccCCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeCC------CceeEEEEEE
Q 018161 221 FVYWSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS------DKHDYYVLGT 292 (360)
Q Consensus 221 ~ly~S~Dl~~W~~~~~~--l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~~------~~~~~Y~vG~ 292 (360)
.+++|+|+.+|+..+.. ........++|||++|+++ | +|+|++|... .....|.+++
T Consensus 151 ~~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~--g-------------~~yL~~s~~~~~~~~~~y~~~~~~~~ 215 (286)
T cd08772 151 FLYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN--G-------------KYYLFYSINGTGRVDSTYSIGYARSE 215 (286)
T ss_pred EEEEcCCCCCcccccceeeEeeccCCCceeccEEEEEC--C-------------EEEEEEEcCCCcCCCCCcceEEEEcc
Confidence 99999999999876543 1223456799999999997 4 7888887643 4566777776
Q ss_pred EeCCCCeeccCCCCCC-CCCceeeccCC-CcccceeecCCCCcEEEEEecCCCCCCCCCcCCCCeeeecC
Q 018161 293 YDPQMDIFSPDTDFHG-NSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQVI 360 (360)
Q Consensus 293 ~d~~~~~f~~~~~~~~-~~~~~~lD~G~-fYA~qtf~d~~~gr~i~~gW~~~~~~~~~~~~~gW~g~ltl 360 (360)
.+ .+.|++.....- .......|.+. +||++.|.++ ++|++|++|+.+++.... ...+|+++|+|
T Consensus 216 ~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 281 (286)
T cd08772 216 SD--TGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAI 281 (286)
T ss_pred CC--CCCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCcccccc
Confidence 43 356664432100 00123456664 9999999986 799999999999876433 55799999986
No 10
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=99.95 E-value=9.4e-26 Score=218.84 Aligned_cols=193 Identities=22% Similarity=0.229 Sum_probs=133.6
Q ss_pred CCCcceE-ECCEEEEEEEECCCC----CCCCCcceEEEEEeCCcccceecccccCCCCccCCCCeEeccEEEcCCCceEE
Q 018161 69 DPNGPMY-YKGVYHLFYQYNPLG----PLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (360)
Q Consensus 69 DPnG~~~-~~G~YHlFyq~~P~~----~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~~l 143 (360)
|..|-+. ++|..-+|++..|.. ..|+ .++|+|++|+||++|++.+ +|.|+..+|..+||||||++..+|+++|
T Consensus 9 d~~g~~~~~~G~~~vfaL~a~~~~~~~~rh~-~~~wgh~~S~dlv~W~~~~-~l~p~~~~d~~g~wSGsa~~~~dg~~~l 86 (349)
T cd08997 9 DRDGEVASYNGYEVIFALTADRNLDPDDRHG-DARIGYFYSRAGGNWIDGG-KVFPDGLSPGSREWSGSATLDDDGTVQL 86 (349)
T ss_pred CCCCCEEEECCEEEEEEEecCCCCCCCCCcC-ceEEEEEEeCCCCcccCCC-ccCCCCcccCCCeEcceEEEeCCCeEEE
Confidence 5555333 567544888876654 4678 9999999999999999955 4668888999999999999856799999
Q ss_pred EEEeeeC----CCceeEEEEEecCCCC-CCcceEEEecCCceecCC--------------CCCCCcCcCCCeEEEEcCCC
Q 018161 144 LYTGIDA----SGQQVQNLAMPENLSD-PLLKDWVKFSGNPVMTPP--------------NGVKDDMFRDPTTAWQAPDG 204 (360)
Q Consensus 144 ~YTg~~~----~~~~~q~lA~S~D~~d-~~l~~w~k~~~~Pvi~~p--------------~~~~~~~fRDP~Vv~~~~~g 204 (360)
||||+.+ .+...|++|.+++... .-+..|++ ..+++.+. +.....+||||+|+.++++|
T Consensus 87 fYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~--~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G 164 (349)
T cd08997 87 FYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFED--HHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETG 164 (349)
T ss_pred EEeccccCCCCCCCceEEEEEEECCCcceEecccCc--cceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCC
Confidence 9999853 2456677776654310 00112222 12343221 11235789999965553479
Q ss_pred eEEEEEeeeeC-C---------------------------ccEEEEE--EeCCCCCcEEcccccccCCCCCceeeceEEE
Q 018161 205 RWRVLVGGQID-N---------------------------EGMAFVY--WSWDFIHWTKLDHPLYSVQETGMWECPDIFP 254 (360)
Q Consensus 205 ~~~M~~g~~~~-~---------------------------~G~i~ly--~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~ 254 (360)
+|||+++++.. . .|+|.++ +|+|+.+|+..++++.......+||||++|+
T Consensus 165 ~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~PL~~a~~v~d~~E~P~v~~ 244 (349)
T cd08997 165 KTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLPPLLEANGVNDELERPHVVF 244 (349)
T ss_pred cEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcCccccCCCcCCceEcceEEE
Confidence 99999988752 2 3667776 5679999999865443322345799999999
Q ss_pred eccCCccceeeccCCCCceeEEEEee
Q 018161 255 VSINGTIGVDTSVLNPGVKHVLKTSL 280 (360)
Q Consensus 255 l~~~g~~g~~~s~~~~~~~~vl~~s~ 280 (360)
++ | ||+|+.|.
T Consensus 245 ~~--g-------------k~yL~~s~ 255 (349)
T cd08997 245 HN--G-------------KYYLFTIS 255 (349)
T ss_pred EC--C-------------EEEEEEeC
Confidence 97 5 77777764
No 11
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.92 E-value=8.5e-24 Score=201.75 Aligned_cols=190 Identities=21% Similarity=0.314 Sum_probs=141.4
Q ss_pred eeeeCCCCCccCCCcceEE-CCEEEEEEEECCCCCC---CCCcceEEEEEeCCcc-cceecccccCCC--CccCCCCeEe
Q 018161 58 YHFRPPQNWINDPNGPMYY-KGVYHLFYQYNPLGPL---FGDKMIWAHSVSYDLI-NWIHLSHALCPS--GPYDINSCWS 130 (360)
Q Consensus 58 ~H~~p~~gw~nDPnG~~~~-~G~YHlFyq~~P~~~~---~g~~~~Wgha~S~Dlv-~W~~~~~al~P~--~~~d~~gv~s 130 (360)
..|..+..++.+|. +++. +|+||||||..|.+.. |-....|+||+|+|+. +|+..+++|.|+ ..+|..++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 45777888899998 4554 5899999999887643 2113569999999987 899999999887 4688899999
Q ss_pred ccEEEcCCCceEEEEEeeeC-------CCceeEEEEEecCCCCCCcceEEEecCCceecC-C-----------------C
Q 018161 131 GSVTILPGDKPFILYTGIDA-------SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP-P-----------------N 185 (360)
Q Consensus 131 Gs~v~~~dg~~~l~YTg~~~-------~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~-p-----------------~ 185 (360)
++++. .+|+++|+||+... ...+++++|+|++.. .+|++. .+|||.+ + .
T Consensus 83 P~vi~-~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~----g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~ 156 (291)
T cd08994 83 PTIKR-FDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLD----GPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPD 156 (291)
T ss_pred CeEEE-ECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCC----CCcEEC-CCceecCCCCccccccccCCCeEEeCC
Confidence 99988 78999999999753 235678888887642 357664 3455421 0 0
Q ss_pred -------------------------------------------CCCCcCcCCCeEEEEcCCCeEEEEEeeeeC----Ccc
Q 018161 186 -------------------------------------------GVKDDMFRDPTTAWQAPDGRWRVLVGGQID----NEG 218 (360)
Q Consensus 186 -------------------------------------------~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~----~~G 218 (360)
......+|||+| |+ .+|+|+|+++++.. ..+
T Consensus 157 g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~V-~~-~~g~yym~~~~~~~~~~~~~~ 234 (291)
T cd08994 157 GSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPFV-WY-DKGQFHMIVKDMLGYVTGEKG 234 (291)
T ss_pred CCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCceE-EE-eCCEEEEEEeecccCcCCCCc
Confidence 001245799994 65 46999999998752 468
Q ss_pred EEEEEEeCCCCCcEEccccccc-----C----CCCCceeeceEE-Eec
Q 018161 219 MAFVYWSWDFIHWTKLDHPLYS-----V----QETGMWECPDIF-PVS 256 (360)
Q Consensus 219 ~i~ly~S~Dl~~W~~~~~~l~~-----~----~~~~~wECPdlf-~l~ 256 (360)
++.+|+|+|+++|++.+.++.. . ....|||||+++ ..+
T Consensus 235 ~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 235 GGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred eEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 9999999999999998665321 1 135799999999 666
No 12
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.86 E-value=1.4e-20 Score=178.31 Aligned_cols=191 Identities=19% Similarity=0.234 Sum_probs=137.7
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCC-CccCCCCeEeccEEEcCCCceE
Q 018161 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPS-GPYDINSCWSGSVTILPGDKPF 142 (360)
Q Consensus 64 ~gw~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~-~~~d~~gv~sGs~v~~~dg~~~ 142 (360)
.|+++||+. ++++|+||||++....+. . ...|.+++|+||+||+.++.+|.+. ..++..++|+++++. .+|+++
T Consensus 5 ~g~~~DP~i-~~~~g~yY~~~t~~~~~~--~-~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy 79 (275)
T cd09004 5 PGWYADPEI-RIFGGTYYIYPTSDGAGG--E-QTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYY 79 (275)
T ss_pred CCCCCCCCe-EEECCEEEEEEeccCCCC--C-eeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEE
Confidence 468999995 788999999998764322 2 4679999999999999999998765 346678999999988 789999
Q ss_pred EEEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCCccEEEE
Q 018161 143 ILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFV 222 (360)
Q Consensus 143 l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~~G~i~l 222 (360)
|+||+. +.+++|+|+|+. ..|++..++|++.... .....+||.|+ .+.+|++||++++. +.+.+
T Consensus 80 ~yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~vf-~d~dG~~yl~~~~~----~~~~i 143 (275)
T cd09004 80 FYFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDVF-IDDDGQAYLYWGGW----GHCNV 143 (275)
T ss_pred EEEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCeE-ECCCCCEEEEEcCc----CCEEE
Confidence 999985 468899998864 3577744678875422 23578999954 44789999999864 12233
Q ss_pred -EEeCCCCCcEEcccccccCCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeCCCceeEEEEE
Q 018161 223 -YWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLG 291 (360)
Q Consensus 223 -y~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~~~~~~~Y~vG 291 (360)
-.|+|+.+|+.....+ ......+.|||.+|+.+ | +++|++|........|.++
T Consensus 144 ~~l~~d~~~~~~~~~~~-~~~~~~~~EgP~i~k~~--G-------------~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 144 AKLNEDMISFDGERDGS-EITPKNYFEGPFMFKRN--G-------------IYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred EEECCCcccccCcceee-eccCCCceecceEEEEC--C-------------EEEEEEECCCCCCCCceEE
Confidence 3478888886443222 12234589999999986 4 6777777643222234444
No 13
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.85 E-value=4.6e-20 Score=176.71 Aligned_cols=162 Identities=21% Similarity=0.310 Sum_probs=124.2
Q ss_pred ccCCCcceEECCEEEEEEEECCCCC--CCCCcceEEEEEeCCcccceecccccCCCCccCCCCeEeccEEEcCCCceEEE
Q 018161 67 INDPNGPMYYKGVYHLFYQYNPLGP--LFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFIL 144 (360)
Q Consensus 67 ~nDPnG~~~~~G~YHlFyq~~P~~~--~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~~l~ 144 (360)
+.+|. +++++|+||||||++|..+ .++ .++|+||+|+||++|++.++++. +..++.+++++.+.+|+++||
T Consensus 79 ~WAP~-v~~~~G~y~myys~~~~~~~~~~~-~~~i~~a~S~Dl~~w~~~~~~~~-----~~~~~iD~~vf~~~dg~~yl~ 151 (294)
T cd08984 79 FWAPE-VVWHGGVYHMYVTYIPGVPPDWGG-PRRIVHYTSPNLWDWTFVGRVDL-----DSDRVIDACVFKLPDGRWRMW 151 (294)
T ss_pred eeCce-EEEECCEEEEEEEecCCCCcccCC-CcEEEEEECCCcCcceECCcccc-----CCCCcEEeEEEEeCCCEEEEE
Confidence 35787 6889999999999998653 234 78999999999999999887632 235788999998667999999
Q ss_pred EEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCCccEEEEEE
Q 018161 145 YTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYW 224 (360)
Q Consensus 145 YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~~G~i~ly~ 224 (360)
||+.. +.+.+++|.|+|+ .+|++. .+++.. ...++|+| |+ .+|+|||+++. ..| +.+|+
T Consensus 152 y~~~~--~~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v-~k-~~g~yym~~~~---~~g-~~~~~ 210 (294)
T cd08984 152 YKDER--RGSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNV-FR-WKGYYWMIIDE---WKG-LGVYR 210 (294)
T ss_pred EECCC--CCeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCe-eE-ECCEEEEEEcC---Cce-EEEEE
Confidence 99753 3456789999886 799984 456542 23389995 55 57999999854 234 67999
Q ss_pred eCCCCCcEEcccccccC----CCCCceeeceEEEec
Q 018161 225 SWDFIHWTKLDHPLYSV----QETGMWECPDIFPVS 256 (360)
Q Consensus 225 S~Dl~~W~~~~~~l~~~----~~~~~wECPdlf~l~ 256 (360)
|+|+.+|++.+.++... ....+.+||++++.+
T Consensus 211 S~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 211 SKDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred CCChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 99999999998776542 124478999999876
No 14
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.85 E-value=3.5e-20 Score=175.08 Aligned_cols=149 Identities=15% Similarity=0.230 Sum_probs=115.4
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecc-cccCC--CCccCCCCeEeccEEEcCCCceEEEE
Q 018161 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCP--SGPYDINSCWSGSVTILPGDKPFILY 145 (360)
Q Consensus 69 DPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~-~al~P--~~~~d~~gv~sGs~v~~~dg~~~l~Y 145 (360)
|| ++++++|+||||||.++.. + .++|+||+|+|++||++.+ +.|.| +..++..+|+.++++. .+|+++|+|
T Consensus 2 nP-~v~~~~G~y~l~y~~~~~~---~-~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Y 75 (268)
T cd08993 2 NP-AVVYDNGEFYLLYRAAGND---G-VIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITY 75 (268)
T ss_pred cC-eEEEECCEEEEEEEEECCC---C-ceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEE
Confidence 56 4789999999999987643 4 7899999999999999865 44556 5567888999999987 799999999
Q ss_pred EeeeC-CCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeee---CCccEEE
Q 018161 146 TGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI---DNEGMAF 221 (360)
Q Consensus 146 Tg~~~-~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~---~~~G~i~ 221 (360)
|+... ...+++++|+|+|+ .+|+|.. . ++. + ..||+.++-...+|+|+|++.... +..+.|.
T Consensus 76 ta~~~~~~~~~i~lA~S~D~-----~~W~~~~-~-~~~-~------~~~d~~~~p~~~~g~y~m~~r~~~~~~~~~~~I~ 141 (268)
T cd08993 76 AARPNAPNGTRIGLATTKDF-----ITFERLG-T-SLV-P------NNRDGILFPEKINGKYVMLHRPFEYGGTSPPDMW 141 (268)
T ss_pred EccCCCCCCcEEEEEEeCCc-----ceEEEec-c-cCC-C------CCCCEEEeeEEECCEEEEEEccccCCCCCCCcEE
Confidence 99763 35678999999996 7999963 2 221 1 237888432225899999996442 2467899
Q ss_pred EEEeCCCCCcEEcccc
Q 018161 222 VYWSWDFIHWTKLDHP 237 (360)
Q Consensus 222 ly~S~Dl~~W~~~~~~ 237 (360)
+++|+|+.+|+....+
T Consensus 142 lA~S~Dl~~W~~~~~~ 157 (268)
T cd08993 142 LSFSPDLVHWGNHRFV 157 (268)
T ss_pred EEECCCcCccCCCeEE
Confidence 9999999999976543
No 15
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.82 E-value=1.1e-18 Score=165.77 Aligned_cols=185 Identities=19% Similarity=0.217 Sum_probs=131.2
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCCc-cCCCCeEeccEEEcCCCceEE
Q 018161 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-YDINSCWSGSVTILPGDKPFI 143 (360)
Q Consensus 65 gw~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~-~d~~gv~sGs~v~~~dg~~~l 143 (360)
+..-||. +++++|+|+||+.... ..++.+++|+||+||+.++.+|.+... ....++|.++++. .+|+++|
T Consensus 6 ~~~~DP~-i~~~~g~yy~~~t~~~-------~~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~-~~g~y~~ 76 (287)
T cd08999 6 GDFPDPS-VIRVDGTYYAYATNGN-------GPNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSY-VNGKYVL 76 (287)
T ss_pred CCCCCCe-EEEECCEEEEEEeCCC-------CCcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEE-ECCEEEE
Confidence 4557998 5788999999998543 246999999999999999988877654 4456788888887 7899999
Q ss_pred EEEeeeCC-CceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCCcc---E
Q 018161 144 LYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG---M 219 (360)
Q Consensus 144 ~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~~G---~ 219 (360)
+|++.... ..+.+++|+|+|.. ..|++.. .+++..+. .....+||.| +.+++|++||+++......+ .
T Consensus 77 ~y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~-~~~~~~~~--~~~~~~Dp~v-~~d~dG~~Yl~~~~~~~~~~~~~~ 148 (287)
T cd08999 77 YYSARDKGSGGQCIGVATADSPL----GPFTDHG-KPPLCCPE--GEGGAIDPSF-FTDTDGKRYLVWKSDGNSIGKPTP 148 (287)
T ss_pred EEEeecCCCCCEEEEEEECCCCC----CCCccCC-cceEecCC--CCCCccCCCe-EECCCCCEEEEEeccCCCCCCCce
Confidence 99998652 45778899998863 3688753 33433222 2356799995 45468999999986542211 2
Q ss_pred EEEE-EeCCCCCcEEccccccc---CCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeC
Q 018161 220 AFVY-WSWDFIHWTKLDHPLYS---VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (360)
Q Consensus 220 i~ly-~S~Dl~~W~~~~~~l~~---~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~ 281 (360)
+.+. .|+|+.+|......+.. .....++|||.+|+.+ | +++|++|..
T Consensus 149 i~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~~S~~ 199 (287)
T cd08999 149 IYLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG--G-------------YYYLFYSAG 199 (287)
T ss_pred EEEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEEC--C-------------EEEEEEEcC
Confidence 3333 37888888644322211 1234589999999986 4 778888764
No 16
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=99.79 E-value=8e-18 Score=159.40 Aligned_cols=195 Identities=18% Similarity=0.248 Sum_probs=137.7
Q ss_pred CCCcceEECCEEEEEEEECCCCCC---CCCcceEEEEEeCCcccceecccccCCCC-c-cCCCCeEeccEEEcCCCceEE
Q 018161 69 DPNGPMYYKGVYHLFYQYNPLGPL---FGDKMIWAHSVSYDLINWIHLSHALCPSG-P-YDINSCWSGSVTILPGDKPFI 143 (360)
Q Consensus 69 DPnG~~~~~G~YHlFyq~~P~~~~---~g~~~~Wgha~S~Dlv~W~~~~~al~P~~-~-~d~~gv~sGs~v~~~dg~~~l 143 (360)
||. +++++|+||||.......+. +. ...|..++|+||+||+.++.+|.+.. . ++..++|.++++. .+|+++|
T Consensus 2 DP~-~~~~~~~yy~~~t~~~~~~~~~~~~-~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~ 78 (274)
T cd08990 2 DPA-AHVFNGRVYIYTSHDEAGGGGDDFC-MNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYL 78 (274)
T ss_pred CCC-cEEECCEEEEEeCCCCCCCCCCccc-cceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEE
Confidence 887 57889999999987644431 22 34589999999999999999987553 2 6678999999987 8999999
Q ss_pred EEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCCccEEEEE
Q 018161 144 LYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVY 223 (360)
Q Consensus 144 ~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~~G~i~ly 223 (360)
||++......+.+++|+|+|+. ..|++....|++... .......||.+ |.+.+|++||+++.. .+....-
T Consensus 79 yy~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~--~~~~~~iDp~v-f~d~dG~~yl~~~~~---~~~~~~~ 148 (274)
T cd08990 79 YFPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTP--SGGWYSIDPAV-FIDDDGQAYLYWGGG---LGLRVAK 148 (274)
T ss_pred EEEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccC--CCCCCccCCcE-EECCCCCEEEEECCc---CCEEEEE
Confidence 9998754445778999998863 368876444554321 12356789995 444789999999865 2333334
Q ss_pred EeCCCCCcEEccccccc-----CCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeCCCceeEEEEE
Q 018161 224 WSWDFIHWTKLDHPLYS-----VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLG 291 (360)
Q Consensus 224 ~S~Dl~~W~~~~~~l~~-----~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~~~~~~~Y~vG 291 (360)
.|+|+.+|+.....+.. ....+..|+|.+|+.+ | +++|++|........|.+.
T Consensus 149 l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 149 LKPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN--G-------------TYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred eCccccccCCCcEEEEeccccCCCCCCcccceeEEEEC--C-------------EEEEEEECCCCcEEEEEEc
Confidence 57899999754333321 1234578999999987 5 6777777654444445443
No 17
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=99.75 E-value=1.2e-16 Score=149.64 Aligned_cols=191 Identities=20% Similarity=0.172 Sum_probs=130.6
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccC----CCCccCCCCeEeccEEEcCCCceEEE
Q 018161 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC----PSGPYDINSCWSGSVTILPGDKPFIL 144 (360)
Q Consensus 69 DPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~----P~~~~d~~gv~sGs~v~~~dg~~~l~ 144 (360)
||. +++++|+||||+..... . ...+..++|+||++|+..+.+|. +....+..++|+++++. .+|+++|+
T Consensus 2 DP~-v~~~~~~yyl~~t~~~~----~-~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ 74 (271)
T cd08978 2 DPY-ILRYNGKYYLYGSTDDA----A-GPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIY-YEGKYYLY 74 (271)
T ss_pred CCc-EEEECCEEEEEEecCCc----C-CCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEE-ECCEEEEE
Confidence 887 67889999999987543 2 34689999999999999998875 33445567899999988 78999999
Q ss_pred EEeeeCC-CceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeC--CccEEE
Q 018161 145 YTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--NEGMAF 221 (360)
Q Consensus 145 YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~--~~G~i~ 221 (360)
|++...+ ..+.+++|+|+|+ ..|.+....+. +. ......+||.|+. +++|++||+++.... ..+.|.
T Consensus 75 y~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~~~~---~~-~~~~~~iDp~vf~-d~dg~~yl~~~~~~~~~~~~~i~ 144 (271)
T cd08978 75 YSVSDFDYNGSGIGVATSEDP-----TGPFEDKVIRP---PT-SNNGNSIDPTVFK-DDDGKYYLYYGSGDPGAGFGGIY 144 (271)
T ss_pred EEcccCCCCcccEEEEECCCC-----CCCccccccCc---Cc-cCCCCccCcceEE-cCCCCEEEEEecccCCCCCCcEE
Confidence 9997532 3577899999887 34444221111 11 1235678999654 467999999987642 245678
Q ss_pred EEEeCCCCCcEEccccc--ccCCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeCCCceeEEEEE
Q 018161 222 VYWSWDFIHWTKLDHPL--YSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLG 291 (360)
Q Consensus 222 ly~S~Dl~~W~~~~~~l--~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~~~~~~~Y~vG 291 (360)
++++++...|......+ .......+.|+|.+|+.+ | +++|++|........|.++
T Consensus 145 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~~~~~~y~~~ 201 (271)
T cd08978 145 ISELTDDLTKPTGPPVLSASSGNNNAVTEGPTIFKKN--G-------------YYYLTYSANGTGDYGYNIG 201 (271)
T ss_pred EEEECcccccccCCceeeeeeccCCCceEccEEEEEC--C-------------EEEEEEEeCCCCCCCceEE
Confidence 88887755443221111 112234589999999986 4 7788887653323345555
No 18
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.72 E-value=3.3e-16 Score=152.25 Aligned_cols=172 Identities=18% Similarity=0.255 Sum_probs=127.2
Q ss_pred CccceeeeCCCCC-ccCCCcceEECCEEEEEEEECCC-----------CC--CCCCcceEEEEEeCCcccceecccccCC
Q 018161 54 YLTSYHFRPPQNW-INDPNGPMYYKGVYHLFYQYNPL-----------GP--LFGDKMIWAHSVSYDLINWIHLSHALCP 119 (360)
Q Consensus 54 ~rp~~H~~p~~gw-~nDPnG~~~~~G~YHlFyq~~P~-----------~~--~~g~~~~Wgha~S~Dlv~W~~~~~al~P 119 (360)
..|..=+.+..+. ..||..+++.+|+|||||+.... .+ .|. ...++||+|+||++|++++++|.+
T Consensus 23 ~~p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~-~y~I~~A~S~Dgv~W~~~g~~L~~ 101 (349)
T cd08992 23 IYPKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWD-KCEIWHATSKDGWTWKEEGPAIGR 101 (349)
T ss_pred cCcccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCC-ceEEEEEECCCCCCceECCccccC
Confidence 3455555555554 35998789999999999996431 11 245 678999999999999999988865
Q ss_pred C--CccCCCCeEeccEEEcCCCceEEEEEeeeCC----CceeEEEEEecCCCCCCcceEEEecCCceecCC---------
Q 018161 120 S--GPYDINSCWSGSVTILPGDKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP--------- 184 (360)
Q Consensus 120 ~--~~~d~~gv~sGs~v~~~dg~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p--------- 184 (360)
. ..||..++|.+.++. .+|+++|||++.... ..+.+++|+|+++. ..|++. .+||+.+.
T Consensus 102 ~~~g~Wd~~~vwaP~Vi~-~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~ 175 (349)
T cd08992 102 GEKGAYDDRSVFTPEVLE-HEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDE 175 (349)
T ss_pred CCCCCccccceECcEEEE-ECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeecc
Confidence 4 358989999999987 899999999976431 23578999998863 359985 68998542
Q ss_pred ---------CCCCCcCcCCCeEEEEcCCCeEEEEEeeeeC--------CccEEEEEEeCCCC-CcEEc
Q 018161 185 ---------NGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--------NEGMAFVYWSWDFI-HWTKL 234 (360)
Q Consensus 185 ---------~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~--------~~G~i~ly~S~Dl~-~W~~~ 234 (360)
..++...+.||.|+ + .+|+|||++.+... ..-++.++.|++.. -|+..
T Consensus 176 ~~~~~~~~~g~wD~~~v~~P~v~-~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~ 241 (349)
T cd08992 176 DNRFLVKKKGSFDSHKVHDPCLF-P-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKS 241 (349)
T ss_pred CceeEeccCCCcccCceECCEEE-E-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeC
Confidence 12456678899965 4 58999999966431 12368899999975 58765
No 19
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.71 E-value=8.1e-16 Score=146.91 Aligned_cols=179 Identities=16% Similarity=0.142 Sum_probs=125.1
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCC-ccCCCCeEeccEEEcCCCceEEEEEe
Q 018161 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG-PYDINSCWSGSVTILPGDKPFILYTG 147 (360)
Q Consensus 69 DPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~-~~d~~gv~sGs~v~~~dg~~~l~YTg 147 (360)
||. +++++|+|+||+..... ...+..++|+||++|+.++.++.+.. .+...++|.++++. .+|+++|+||+
T Consensus 2 DP~-v~~~~g~yyl~~t~~~~------~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~ 73 (294)
T cd08991 2 DPF-VLRYNGKYYAYGTGGAD------GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSA 73 (294)
T ss_pred CCe-EEEECCEEEEEEeCCCC------CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEe
Confidence 888 68889999999876432 13488999999999999998887654 36778999999987 78999999998
Q ss_pred eeCC-CceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCC---ccEEEEE
Q 018161 148 IDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN---EGMAFVY 223 (360)
Q Consensus 148 ~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~---~G~i~ly 223 (360)
.... ..+.+++|+|+|+. ..|++.. .+.+.. ....+||.++. +.||++||+++..... .+....-
T Consensus 74 ~~~~~~~~~i~~a~s~~p~----gp~~~~~-~~~~~~-----~~~~iD~~vf~-d~dG~~yl~~~~~~~~~~~~~i~~~~ 142 (294)
T cd08991 74 NDRDEKTEHIGVAVSDSPL----GPFRDIK-KPPIDF-----EPKSIDAHPFI-DDDGKPYLYYSRNNYGNRVSDIYGTE 142 (294)
T ss_pred ccCCCCcceEEEEEeCCCC----CCCCcCC-CCcccC-----CCcccCCceEE-CCCCCEEEEEEecCCCCcccceEEEE
Confidence 7643 56788999998863 3577642 232221 13567999654 4679999999865421 2344444
Q ss_pred EeCCCCCcEEccc----cccc--------------CCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeC
Q 018161 224 WSWDFIHWTKLDH----PLYS--------------VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (360)
Q Consensus 224 ~S~Dl~~W~~~~~----~l~~--------------~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~ 281 (360)
-|.|+.+|..... ++.. .....+.|+|.+++.+ | +++|++|..
T Consensus 143 l~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~ 203 (294)
T cd08991 143 LVDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN--G-------------RYYLTYSAN 203 (294)
T ss_pred EccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC--C-------------EEEEEEECC
Confidence 5788877752111 1110 0123479999999997 4 677777753
No 20
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.67 E-value=4.6e-15 Score=142.18 Aligned_cols=170 Identities=22% Similarity=0.253 Sum_probs=121.2
Q ss_pred ccCCCcceEE--CCEEEEEEEE-CCCC----CCCCCcceEEEEEeCC-cccceecccccCCCCccCCCCeEeccEEEcCC
Q 018161 67 INDPNGPMYY--KGVYHLFYQY-NPLG----PLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPG 138 (360)
Q Consensus 67 ~nDPnG~~~~--~G~YHlFyq~-~P~~----~~~g~~~~Wgha~S~D-lv~W~~~~~al~P~~~~d~~gv~sGs~v~~~d 138 (360)
.-||. +++. +|+|||||.. .... ..|.....+++|+|+| |+||++++.++.++..+....+|++.++. .+
T Consensus 11 ~~DP~-i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~ 88 (294)
T cd08984 11 AADPT-IIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HG 88 (294)
T ss_pred CCCCE-EEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-EC
Confidence 67998 6776 7899999952 1111 2343246799999999 99999998877664455566789999987 79
Q ss_pred CceEEEEEeeeC-----CCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeee
Q 018161 139 DKPFILYTGIDA-----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (360)
Q Consensus 139 g~~~l~YTg~~~-----~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~ 213 (360)
|+++|||+.... .....+++|+|+|. .+|++. .++... .....||.|+ +..+|+|+|++...
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl-----~~w~~~--~~~~~~-----~~~~iD~~vf-~~~dg~~yl~y~~~ 155 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPNL-----WDWTFV--GRVDLD-----SDRVIDACVF-KLPDGRWRMWYKDE 155 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCCc-----CcceEC--CccccC-----CCCcEEeEEE-EeCCCEEEEEEECC
Confidence 999999997642 13457889999985 689984 343211 1345799954 43679999999653
Q ss_pred eCCccEEEEEEeCCCCCcEEcccccccCCCCCceeeceEEEec
Q 018161 214 IDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (360)
Q Consensus 214 ~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (360)
. ....+.+..|+|+.+|+..+..+. ...-|.|.+|+.+
T Consensus 156 ~-~~~~~~~a~s~D~~~w~~~~~~i~----~~~~EgP~v~k~~ 193 (294)
T cd08984 156 R-RGSTTYAADSEDLYHWTVEGPVLG----DRPHEGPNVFRWK 193 (294)
T ss_pred C-CCeEEEEEECCCCCEEEeCCcccc----CCCCCCCCeeEEC
Confidence 2 223456788999999997654332 1234999999986
No 21
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.66 E-value=8.5e-15 Score=139.69 Aligned_cols=178 Identities=21% Similarity=0.236 Sum_probs=121.6
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCCc-------cCCCCeEeccEEEcCCC
Q 018161 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-------YDINSCWSGSVTILPGD 139 (360)
Q Consensus 67 ~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~-------~d~~gv~sGs~v~~~dg 139 (360)
+.||. +++++|+||||+... ++++++|+||+||+..+.+|.+... ....++|.+.++. .+|
T Consensus 1 ~~DP~-v~~~~~~yyl~~t~~----------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g 68 (288)
T cd08998 1 VHDPS-IIKEGDTYYLFSTGN----------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNG 68 (288)
T ss_pred CCCCe-EEEECCEEEEEEcCC----------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECC
Confidence 36997 689999999998753 4899999999999999988865432 3456789999987 799
Q ss_pred ceEEEEEeeeCC-CceeEEEEEecCC-CCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCCc
Q 018161 140 KPFILYTGIDAS-GQQVQNLAMPENL-SDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217 (360)
Q Consensus 140 ~~~l~YTg~~~~-~~~~q~lA~S~D~-~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~~ 217 (360)
+++||||+.... ...++++|+|+|. . ..|++. +||+....+......+||.++. +++|++||++++.. .
T Consensus 69 ~yyl~ys~~~~~~~~~~i~va~s~~~~~----gpw~~~--~~v~~~~~~~~~~~~iDp~vf~-d~dG~~Yl~~~~~~--~ 139 (288)
T cd08998 69 KYYLYYSVSTFGSNRSAIGLATSDTLPD----GPWTDH--GIVIESGPGRDDPNAIDPNVFY-DEDGKLWLSFGSFW--G 139 (288)
T ss_pred EEEEEEEEEeCCCCceEEEEEEeCCCCC----CCCEEc--ceeeecCCCCCCcccccCCEEE-cCCCCEEEEeeecc--C
Confidence 999999987643 4567889999886 2 379873 5887643321234678999654 46899999998642 1
Q ss_pred cEEEEEE-eCC---CCCcEEcccccccCC-CCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeC
Q 018161 218 GMAFVYW-SWD---FIHWTKLDHPLYSVQ-ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (360)
Q Consensus 218 G~i~ly~-S~D---l~~W~~~~~~l~~~~-~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~ 281 (360)
| +.+.+ ++| ...|......+.... .....|-|.+|+-+ | +++|++|..
T Consensus 140 ~-i~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~--g-------------~YYl~~S~~ 192 (288)
T cd08998 140 G-IFLVELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG--G-------------YYYLFVSYG 192 (288)
T ss_pred C-EEEEEeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC--C-------------EEEEEEEcc
Confidence 2 23333 222 123321111111111 23468999999887 4 677777753
No 22
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.59 E-value=2e-13 Score=129.12 Aligned_cols=189 Identities=19% Similarity=0.107 Sum_probs=129.1
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCC----ccCCCCeEeccEEEcC-CCceEE
Q 018161 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG----PYDINSCWSGSVTILP-GDKPFI 143 (360)
Q Consensus 69 DPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~----~~d~~gv~sGs~v~~~-dg~~~l 143 (360)
||. +++++|+|++|-.....+..+ ...+...+|+||+||+.++.+|.+.. .....++|.++++..+ +|+++|
T Consensus 5 ~~~-i~~~~~~yY~ygs~~~~~~~~--~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m 81 (265)
T cd08985 5 GGG-ILKVGGTYYWYGENKGGGDTA--FGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVM 81 (265)
T ss_pred cCc-eEEECCEEEEEEEecCCCCcc--cccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEE
Confidence 444 688999999998765432111 34588999999999999999997764 3445678999998743 689999
Q ss_pred EEEeeeCC-CceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCCccEEEE
Q 018161 144 LYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFV 222 (360)
Q Consensus 144 ~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~~G~i~l 222 (360)
+|+....+ ....+++|+|++.. ..|+.. ..+. +. ....|||.|+ .++||+.||++++..+ ..+.+
T Consensus 82 ~~~~~~~~~~~~~igvA~Sd~p~----Gpf~~~-~~~~---~~---~~~~~Dp~vf-~DdDG~~Yl~~~~~~~--~~i~i 147 (265)
T cd08985 82 WMHIDSSDYSDARVGVATSDTPT----GPYTYL-GSFR---PL---GYQSRDFGLF-VDDDGTAYLLYSDRDN--SDLYI 147 (265)
T ss_pred EEEeCCCCCcceeEEEEEeCCCC----CCCEEC-CccC---CC---CCCccCCceE-EcCCCCEEEEEecCCC--CceEE
Confidence 99986532 35678999998764 357753 2222 11 2467999965 4588999999987532 23455
Q ss_pred EE-eCCCCCcEEcccccccCCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeCC---CceeEEEEEE
Q 018161 223 YW-SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS---DKHDYYVLGT 292 (360)
Q Consensus 223 y~-S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~~---~~~~~Y~vG~ 292 (360)
.+ ++|+..+... +.. .......|||.+|+.+ | +++|++|... .....|.+.+
T Consensus 148 ~~L~~d~~~~~~~--~~~-~~~~~~~EaP~i~K~~--g-------------~YYL~~S~~t~~~~~~~~y~~s~ 203 (265)
T cd08985 148 YRLTDDYLSVTGE--VTT-VFVGAGREAPAIFKRN--G-------------KYYLLTSGLTGWNPNDARYATAT 203 (265)
T ss_pred EEeCCCcccccce--EEE-ccCCCccccceEEEEC--C-------------EEEEEEccCCCccCCceEEEEec
Confidence 55 4677776532 211 1234578999999997 4 7788877531 2345666654
No 23
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=99.54 E-value=1e-12 Score=124.38 Aligned_cols=182 Identities=20% Similarity=0.247 Sum_probs=127.7
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCCccC--CCCe-EeccEEEcCCCce
Q 018161 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYD--INSC-WSGSVTILPGDKP 141 (360)
Q Consensus 65 gw~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d--~~gv-~sGs~v~~~dg~~ 141 (360)
+..-||. +++++|+|+||+...... ..+..++|+||+||+..+.+|.+....+ ..+. |++.++. .+|++
T Consensus 8 ~~~~DP~-i~~~~~~yY~~~t~~~~~------~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~~-~~g~y 79 (286)
T PF04616_consen 8 GDYADPS-IVRFGDGYYLYGTTDPEG------PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIHY-INGKY 79 (286)
T ss_dssp SSECSEE-EEEETTEEEEEEEEBTCE------SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEEE-ETTEE
T ss_pred CCCCCCE-EEEECCEEEEEEEcCCCC------CeEEEEECCCCcccccceeeecccccccccccccccCCeEEE-cCCeE
Confidence 5667998 688999999999875432 4588999999999999998887664332 2233 9999887 89999
Q ss_pred EEEEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCC--ccE
Q 018161 142 FILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN--EGM 219 (360)
Q Consensus 142 ~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~--~G~ 219 (360)
+|+|+.........+.+|+|++.. ..|+... ..++. .....||.|+.+ ++|++||+++..... .+.
T Consensus 80 y~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~-~~~~~------~~~~iD~~vf~d-~dG~~Yl~~~~~~~~~~~~~ 147 (286)
T PF04616_consen 80 YMYYSDSGGDAGSGIGVATADSPD----GPWTDPG-KIPIP------GGNSIDPSVFVD-DDGKYYLYYGSWDNGDPGGG 147 (286)
T ss_dssp EEEEEEESTSTTEEEEEEEESSTT----S-EEEEE-EEEEE------SSSSSSEEEEEE-TTSEEEEEEEESTTTSSEEE
T ss_pred EEEEEccCCCCCcceeEEEeCCcc----ccccccc-ceeec------cccccCceEEEe-cCCCcEEeCcccCCCcccee
Confidence 999993333456678999998874 4788752 22222 245689996554 779999999886532 344
Q ss_pred EEEEE-eCCCCCcEEcc-cccccC---CCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeC
Q 018161 220 AFVYW-SWDFIHWTKLD-HPLYSV---QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (360)
Q Consensus 220 i~ly~-S~Dl~~W~~~~-~~l~~~---~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~ 281 (360)
|.+.+ ++|...+.... ..+... ......|+|.+|+.+ | +++|++|..
T Consensus 148 i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--g-------------~yYl~~s~~ 199 (286)
T PF04616_consen 148 IYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG--G-------------KYYLFYSAG 199 (286)
T ss_dssp EEEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET--T-------------EEEEEEEES
T ss_pred EEeecccCccccccCcccccccccccccCCccccceEEEEcC--C-------------CEEEEEecc
Confidence 55665 56677766543 222222 245689999999987 4 677888864
No 24
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.54 E-value=5.2e-13 Score=127.44 Aligned_cols=178 Identities=18% Similarity=0.225 Sum_probs=118.1
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCCc--c----CCCCeEeccEEEcCC
Q 018161 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP--Y----DINSCWSGSVTILPG 138 (360)
Q Consensus 65 gw~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~--~----d~~gv~sGs~v~~~d 138 (360)
+..-||. +++++|+|+||..... + ...+..++|+||+||+.++.+|.+... + ...++|++.++. .+
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~~----~--~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 77 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSFE----Y--FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HD 77 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCcc----c--CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-EC
Confidence 4567998 6888999999853211 1 235889999999999999988854321 1 345799999987 79
Q ss_pred CceEEEEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeC---
Q 018161 139 DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--- 215 (360)
Q Consensus 139 g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~--- 215 (360)
|+++|+|++........+++|+|+|..+ .|+. |++.. ...+||.|++ +++|++||+++....
T Consensus 78 g~yy~yy~~~~~~~~~~~~v~~s~~p~g----pw~~----~~~~~------~~~iDp~vf~-d~dG~~Y~~~~~~~~~~~ 142 (288)
T cd09000 78 GTFYLITTNVDGMKDGGNFIVTADDPAG----PWSD----PVWLD------SGGIDPSLFF-DDDGKVYLVGNGWDERRG 142 (288)
T ss_pred CEEEEEEEecCCCCCCceEEEEeCCCCC----CCcC----CEecC------CCccCCceeE-cCCCCEEEEecccCCccc
Confidence 9999999987543345677899887642 4653 33321 1558999654 478999999876431
Q ss_pred --CccEEEEEEeCCCCCcEEcccc--cccCCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeC
Q 018161 216 --NEGMAFVYWSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (360)
Q Consensus 216 --~~G~i~ly~S~Dl~~W~~~~~~--l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~ 281 (360)
..+.|.+.+. |...|+..+.+ +.........|+|.+|+.+ | +++|++|..
T Consensus 143 ~~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~YYl~ys~~ 196 (288)
T cd09000 143 YNGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD--G-------------WYYLLIAEG 196 (288)
T ss_pred cCCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC--C-------------EEEEEEecC
Confidence 1234555544 23344433332 2222233578999999986 4 677777653
No 25
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=99.52 E-value=8.6e-13 Score=127.59 Aligned_cols=185 Identities=16% Similarity=0.282 Sum_probs=122.6
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCC---------CCCCcceEEEEEeCCcccceecccccCCC--CccCCCCeEeccE
Q 018161 65 NWINDPNGPMYYKGVYHLFYQYNPLGP---------LFGDKMIWAHSVSYDLINWIHLSHALCPS--GPYDINSCWSGSV 133 (360)
Q Consensus 65 gw~nDPnG~~~~~G~YHlFyq~~P~~~---------~~g~~~~Wgha~S~Dlv~W~~~~~al~P~--~~~d~~gv~sGs~ 133 (360)
.+..||.. +.++|+|+||....-... .+. ...+...+|+||++|+.++.++.|. ..+. .++|.+.+
T Consensus 7 ~~~aDP~~-~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~-~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w~-~~~WAP~v 83 (311)
T cd09003 7 RYGADPTA-VVYNGRVYVYTTNDDYEYDSNTIKDNNYYN-INDITVISSDDMVNWTDHGEIFVPNGIAKWA-GNSWAPSI 83 (311)
T ss_pred CccCCCCe-EEECCEEEEEeCCCCccccccccccCCccc-cCcEEEEECCCCCCcEEcccccCcCCCCCcc-cccCCCce
Confidence 46689984 788999999987643221 122 3458889999999999999998742 2443 47899999
Q ss_pred EEcCC----CceEEEEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCC-CCCCCc-CcCCCeEEEEcCCCeEE
Q 018161 134 TILPG----DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-NGVKDD-MFRDPTTAWQAPDGRWR 207 (360)
Q Consensus 134 v~~~d----g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p-~~~~~~-~fRDP~Vv~~~~~g~~~ 207 (360)
+. .+ |+++|+|+.. ...+++|+|++.. -.|+...+.|++... ++.... .-.||.+++ ++||+.|
T Consensus 84 ~~-~~~~~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~-DdDG~~Y 153 (311)
T cd09003 84 AV-KKINGKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVFV-DDDGQGY 153 (311)
T ss_pred EE-eccCCCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeEE-CCCCCEE
Confidence 87 66 9999999853 3458899998864 368875356777431 221111 237999654 4789999
Q ss_pred EEEeeeeC-----CccEEEEEE-eCCCCCcEEcccccccCCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEee
Q 018161 208 VLVGGQID-----NEGMAFVYW-SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (360)
Q Consensus 208 M~~g~~~~-----~~G~i~ly~-S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~ 280 (360)
|++++... ..+.+.+.+ ++|+..-. ++...- .....+|.|.+++.+ | +++|.+|.
T Consensus 154 l~~g~~~~~~~~~~~~~i~i~~l~~D~~~~~--g~~~~i-~~~~~~Egp~~~K~~--G-------------~YYL~ys~ 214 (311)
T cd09003 154 LYFGGGVPGGRWANPNTARVIKLGDDMISVD--GSAVTI-DAPYFFEASGLHKIN--G-------------TYYYSYCT 214 (311)
T ss_pred EEECCccCCCccccCCCEEEEEeCCCceecc--CCceEc-cCCCceEeeeEEEEC--C-------------EEEEEEeC
Confidence 99985321 123455555 44665432 222111 122578999999986 5 66777665
No 26
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=99.51 E-value=4.4e-13 Score=129.55 Aligned_cols=198 Identities=22% Similarity=0.333 Sum_probs=128.0
Q ss_pred cceEECCE--EEEEEEECCCCCCCCCcceEEEEEeCCcccceecc-cccCCCCccCCCCeEeccEEEcCCCceEEEEEee
Q 018161 72 GPMYYKGV--YHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (360)
Q Consensus 72 G~~~~~G~--YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~-~al~P~~~~d~~gv~sGs~v~~~dg~~~l~YTg~ 148 (360)
|++.++|. +||.|...-.. .+ ..+.|.|.|+|.+||+..+ ++|.|+..++..||....++. .+|+++|+||+.
T Consensus 36 gai~~~~~~R~~l~yr~~~~~--~~-~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~-i~d~yymtYta~ 111 (312)
T PF04041_consen 36 GAIVFDGGLRVYLLYRAYGSD--IG-SSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTK-IDDTYYMTYTAY 111 (312)
T ss_dssp EEEEETTE--EEEEEEEEESS--SS-EEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEE-ETTEEEEEEEEE
T ss_pred cEEEECCeeEEEEEEEeECCC--Cc-eeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEE-ECCEEEEEEEEe
Confidence 45656666 89998764322 22 4489999999999999864 789999999999999999998 789999999998
Q ss_pred eCCCceeEEEEEecCCCCCCcceEEEecCCceecCCC---CCCCcCcCCCeEEEEcCCCeEEEEEeeeeCCccEEEEEEe
Q 018161 149 DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPN---GVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWS 225 (360)
Q Consensus 149 ~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~---~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~~G~i~ly~S 225 (360)
... ..++++|+|+|. ++|+|.+ +++.... ......-+|-.++-...+|+|+|+.. .+.|.+.+|
T Consensus 112 ~~~-~~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r-----~~~i~la~S 178 (312)
T PF04041_consen 112 SGK-GPRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHR-----DPSIWLAYS 178 (312)
T ss_dssp ESS-SEEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEE-----SSSBEEEEE
T ss_pred cCC-CcccceEEccch-----HhhEEec--cccCcccccccccccccCceEEEEEEECCEEEEEEC-----CCCEEEEec
Confidence 753 467899999996 8999974 3332111 01112235554332236899999998 356889999
Q ss_pred CCCCCcEEcccccccCCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEee-CCCceeEEEEEE--EeCC
Q 018161 226 WDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL-FSDKHDYYVLGT--YDPQ 296 (360)
Q Consensus 226 ~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~-~~~~~~~Y~vG~--~d~~ 296 (360)
+|+++|+....++.. ...+.||+ .+++. |+.-+.+ ..-|++++.- .......|.+|- +|.+
T Consensus 179 ~Dl~~W~~~~~~~~~-~~~~~~d~---~kiG~-g~pPi~t-----~~GwL~iyHG~~~~~~~~Y~~g~~LlD~~ 242 (312)
T PF04041_consen 179 PDLIHWGNHREPLLS-PRPGWWDS---SKIGA-GPPPIKT-----DEGWLLIYHGNVTDEGRVYRLGAALLDLD 242 (312)
T ss_dssp SSSSSEEEEBETSB---STTSSCS---SEEEE--S-EEEE-----TTEEEEEEEEEESSTTTEEEEEEEEE-SS
T ss_pred CCccccccccccccc-CCCCcChh---hcccC-CCCceEe-----cCCEEEEEeccccCCCCEEEEEEEEEcCC
Confidence 999999987554443 23456776 33331 1111111 1127776652 123455788886 4554
No 27
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.51 E-value=3.3e-12 Score=121.53 Aligned_cols=204 Identities=13% Similarity=0.099 Sum_probs=131.2
Q ss_pred CCCccCCCcceEE--CCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCCccCCCCeEeccEEEcC-CCc
Q 018161 64 QNWINDPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILP-GDK 140 (360)
Q Consensus 64 ~gw~nDPnG~~~~--~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~gv~sGs~v~~~-dg~ 140 (360)
.+-+.||. +++. +|+|||++...-....+.....+.+++|+||+||+..+.++... ....++|.+.++.++ +|+
T Consensus 15 ~~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~--~~~~~~WAPev~~d~~~g~ 91 (276)
T cd08983 15 TKGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNP--PNAGNTWAPEAFWDAERGQ 91 (276)
T ss_pred CCCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCC--CCcCcEeCccceEcCCCCe
Confidence 35567998 5665 89999999865322222115679999999999999988765221 123578999998754 799
Q ss_pred eEEEEEeeeCC-----CceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeC
Q 018161 141 PFILYTGIDAS-----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID 215 (360)
Q Consensus 141 ~~l~YTg~~~~-----~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~ 215 (360)
++|+|+..... ....+.+|.+.|. .+|+. ..+++.. + ....|+.+ ++ .+|+|||++.....
T Consensus 92 y~~~~s~~~~~~~~~~~~~~i~~~tt~Df-----~tft~--p~~~~~~--~---~~~ID~~v-~~-~~g~~Yl~~k~~~~ 157 (276)
T cd08983 92 YVVYWSSRLYDNTGGFYNYRLYATTTSDF-----VTFTE--PKVWIDL--G---ANVIDTTV-VK-VGGTYYRFYKNEGS 157 (276)
T ss_pred EEEEEecccCCCCCCCccEEEEEEecCcc-----cccCC--CeEeecC--C---CCeEeeEE-EE-eCCEEEEEEecCCC
Confidence 99999987542 1223344444454 67886 3566652 2 46689995 44 35999999875432
Q ss_pred CccEEEEEEeCCCC-CcEEcccccccCCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeCCCceeEEEEEEEe
Q 018161 216 NEGMAFVYWSWDFI-HWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYD 294 (360)
Q Consensus 216 ~~G~i~ly~S~Dl~-~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~~~~~~~Y~vG~~d 294 (360)
..|.+.+|++|. .|+...... .......|-|.+|+++.. .+|+|+++.... +.++..-+-|
T Consensus 158 --~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~~-------------~~y~L~~d~y~~-~~Y~~~~t~d 219 (276)
T cd08983 158 --KDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNNG-------------GGWYLYGDNYSG-GGYYPFDTSD 219 (276)
T ss_pred --CcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEECCC-------------CEEEEEEEECCC-CCeEEEEecC
Confidence 457788899986 687654321 123346899999999832 278888775332 2233333334
Q ss_pred CCCCeecc
Q 018161 295 PQMDIFSP 302 (360)
Q Consensus 295 ~~~~~f~~ 302 (360)
...+.|++
T Consensus 220 ~~~~~~~~ 227 (276)
T cd08983 220 LASTSWTK 227 (276)
T ss_pred cCCCceec
Confidence 33345543
No 28
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=99.47 E-value=4e-12 Score=120.97 Aligned_cols=178 Identities=17% Similarity=0.209 Sum_probs=115.2
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCCcc-------CCCCeEeccEEEcCCCce
Q 018161 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY-------DINSCWSGSVTILPGDKP 141 (360)
Q Consensus 69 DPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~-------d~~gv~sGs~v~~~dg~~ 141 (360)
||. ++.++|+|+||... .| +..++|+||+||+..+.+|.+...+ ...++|.+.++. .+|++
T Consensus 2 DP~-vi~~~~~YY~~~T~------~g----~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~y 69 (279)
T cd08988 2 DPV-IIKEGDTWYVFGTG------PG----ITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQ-HNGKF 69 (279)
T ss_pred CCE-EEEECCEEEEEEec------CC----EEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEE-ECCEE
Confidence 898 57889999998653 13 7889999999999999988644322 235799999887 78999
Q ss_pred EEEEEeeeCC-CceeEEEEEecCCCCCCc-ceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCCccE
Q 018161 142 FILYTGIDAS-GQQVQNLAMPENLSDPLL-KDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGM 219 (360)
Q Consensus 142 ~l~YTg~~~~-~~~~q~lA~S~D~~d~~l-~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~~G~ 219 (360)
+|||++.... ....+++|+|++..+|.- ..|++ ..+|+..... ....-.||.++++ +||++||++++.. .|
T Consensus 70 ylyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~-~~~~~iDp~~f~D-dDG~~Yl~~g~~~--~g- 142 (279)
T cd08988 70 YLYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDAS-DNYNAIDPAIIFD-QHGQPWLSFGSFW--GG- 142 (279)
T ss_pred EEEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCC-CCCCccCCceEEc-CCCCEEEEecccC--CC-
Confidence 9999986532 346789999988754421 12443 3566643221 1234579996554 7899999998632 12
Q ss_pred EEEEE-eCCCCCcEEcccc--ccc-CCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEee
Q 018161 220 AFVYW-SWDFIHWTKLDHP--LYS-VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (360)
Q Consensus 220 i~ly~-S~Dl~~W~~~~~~--l~~-~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~ 280 (360)
|.+.+ +.|+..-...+.. +.. .......|-|-+++-+ | +++|++|.
T Consensus 143 i~~~eL~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~S~ 192 (279)
T cd08988 143 IKLFELDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG--D-------------YYYLFVSF 192 (279)
T ss_pred EEEEEECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC--C-------------eEEEEEEc
Confidence 33433 4454332101111 111 1123468999999876 4 66777765
No 29
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.42 E-value=1.7e-11 Score=117.49 Aligned_cols=134 Identities=18% Similarity=0.182 Sum_probs=94.7
Q ss_pred CCccCCCcceEE--CCEEEEEEEECCCC-CCCCCcceEEEEEeCCcccceecccccCCCC-ccCCCCeEeccEEEcCCCc
Q 018161 65 NWINDPNGPMYY--KGVYHLFYQYNPLG-PLFGDKMIWAHSVSYDLINWIHLSHALCPSG-PYDINSCWSGSVTILPGDK 140 (360)
Q Consensus 65 gw~nDPnG~~~~--~G~YHlFyq~~P~~-~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~-~~d~~gv~sGs~v~~~dg~ 140 (360)
.++-||. ++++ +|+||||....... ..+ ...+.+.+|+||+||+..+.++.+.. .+...++|.+.++. .+|+
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~--~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~-~~G~ 79 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGE--GTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHE-YKGR 79 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccC--CCcEEEEECCChhcccccceeeccCCCcCccccccCCeeee-eCCE
Confidence 3467998 5777 99999999765322 111 24589999999999999999886643 34456789999886 8999
Q ss_pred eEEEEEeeeCC-CceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEee
Q 018161 141 PFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGG 212 (360)
Q Consensus 141 ~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~ 212 (360)
++|+|+..... ....+++|+|++..+ .|+.....|+.. .+ ....||.+ |.+.||+.||+++.
T Consensus 80 yyly~s~~~~~~~~~~~~va~s~~p~G----P~~~~~~~~~~~--~~---~~~iDp~~-f~DdDG~~Yl~~~~ 142 (291)
T cd08981 80 YYMFATFHNPGGERRGTAILVSDSPEG----PFVPHSDGPVTP--ED---WMCLDGTL-YVDEDGKPWMVFCH 142 (291)
T ss_pred EEEEEEeccCCCceeeEEEEECCCCCC----CCEeCCCCccCC--CC---CceEcCce-EEcCCCCEEEEEEe
Confidence 99999876432 234567999887643 577643334432 11 24579995 55478999999864
No 30
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=99.40 E-value=6.4e-12 Score=117.99 Aligned_cols=137 Identities=23% Similarity=0.340 Sum_probs=97.7
Q ss_pred CCccCCCcceEEC-CEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccC-------CCCccCCCCeEeccEEEc
Q 018161 65 NWINDPNGPMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC-------PSGPYDINSCWSGSVTIL 136 (360)
Q Consensus 65 gw~nDPnG~~~~~-G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~-------P~~~~d~~gv~sGs~v~~ 136 (360)
+.+.||. +++.+ |+|||||+..... ... ...+++|+|+|+++|+..+..+. +....+...+..+.++.+
T Consensus 64 ~~~~~p~-v~~~~dg~~~~~Yt~~~~~-~~~-~~~i~~A~S~D~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~ 140 (276)
T cd08979 64 GGVWTPS-VVRDPDGTYRMFYTGYDRP-KGA-VQRIGLATSKDLIHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRD 140 (276)
T ss_pred CCeEcce-EEEcCCCeEEEEEecccCC-CCC-cceEEEEECCCCCceEECCCCcceeeeecCCCCCcccccccccEEEEE
Confidence 3456887 46677 9999999976532 223 67899999999999999876542 223344456788888874
Q ss_pred CC-CceEEEEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeee
Q 018161 137 PG-DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (360)
Q Consensus 137 ~d-g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~ 213 (360)
++ |+++|+|++........+.+|.|+|+ ++|++....+ ....+.....+++|.+ ++ .+|+|+|++++.
T Consensus 141 ~~~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~--~~~~~~~~~~~e~P~~-~~-~~g~~~l~~~~~ 209 (276)
T cd08979 141 EEGGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPP--GPRTGYDDGQLEVPQV-VK-IDGRWYLLYSGR 209 (276)
T ss_pred CCCCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCC--CCCCcccCCcCccceE-EE-ECCEEEEEEEec
Confidence 43 89999999876545678899999986 7999853222 1122233467889995 44 579999999876
No 31
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=99.33 E-value=8.5e-11 Score=111.35 Aligned_cols=173 Identities=18% Similarity=0.188 Sum_probs=112.8
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCCc------cCCCCeEeccEEEcCC
Q 018161 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP------YDINSCWSGSVTILPG 138 (360)
Q Consensus 65 gw~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~------~d~~gv~sGs~v~~~d 138 (360)
+..-||. +++++|+|+|++..... ...+...+|+||+||+..+.++..... ....++|.+.++. .+
T Consensus 6 ~~~~DP~-ii~~~~~yY~~~t~~~~------~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 77 (269)
T cd08989 6 GDNPDPS-IIRAGDDYYMASSTFEW------FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLSY-YD 77 (269)
T ss_pred CCCCCCc-EEEECCeEEEEECcccc------CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEEE-EC
Confidence 5567998 68899999999854211 123677899999999999888754321 1235799999887 79
Q ss_pred CceEEEEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCCcc
Q 018161 139 DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218 (360)
Q Consensus 139 g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~~G 218 (360)
|+++|+|+........++++|+|++..+ .|+. |+... ....||.++. ++||+.||+.+.. +
T Consensus 78 G~yy~yy~~~~~~~~~~i~va~sd~~~G----pw~~----~~~~~------~~~IDp~~f~-D~dG~~Yl~~~~~----~ 138 (269)
T cd08989 78 GKFWLIYTAVKVWKDCHNYLFTAEDITG----PWSR----PIFLN------YGGFDPSLFH-DDDGKKYLINMGW----S 138 (269)
T ss_pred CEEEEEEeccccCCCceEEEEEECCCCC----CCcC----CEECC------CCcccCceEE-cCCCCEEEEecCC----C
Confidence 9999999986433445788999987643 4653 44321 2347999554 4799999998752 2
Q ss_pred EEEEEE-eCCCCCcEEcccc----cccCCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeC
Q 018161 219 MAFVYW-SWDFIHWTKLDHP----LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (360)
Q Consensus 219 ~i~ly~-S~Dl~~W~~~~~~----l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~ 281 (360)
.|.+.+ +.|...= .+.+ +.........|-|.+++.+ | +++|++|..
T Consensus 139 ~i~l~~l~~~~~~~--~~~~~~~~~~~~~~~~~~Egp~~~k~~--G-------------~YYl~~S~~ 189 (269)
T cd08989 139 GIRLQEYSPAEKKL--IGKPLNKVIIKGTDDGLTEGPHLYKIN--G-------------KYYLTTAEG 189 (269)
T ss_pred cEEEEEEChhhCCC--CCCceeEEEecCCCCCccccceEEEEC--C-------------EEEEEEeeC
Confidence 234443 2332210 1111 1111234468999999876 4 677777764
No 32
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.29 E-value=1.8e-10 Score=112.33 Aligned_cols=171 Identities=18% Similarity=0.230 Sum_probs=113.7
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcc-cceecc-cccCCCC------------------ccCCCC
Q 018161 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLS-HALCPSG------------------PYDINS 127 (360)
Q Consensus 68 nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~-~al~P~~------------------~~d~~g 127 (360)
.-|. +++++|+|||||+..-.........+.+.|+|++.. .|++.+ ++|.|.. .+|..+
T Consensus 113 waP~-Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~p~~dg~w~~d~~~~~~~~~~g~wD~~~ 191 (349)
T cd08992 113 FTPE-VLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILSPSNDGIWKGDEDNRFLVKKKGSFDSHK 191 (349)
T ss_pred ECcE-EEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEecCCcCCceeeccCceeEeccCCCcccCc
Confidence 4565 577899999999853211110003567888887775 699754 5566642 356667
Q ss_pred eEeccEEEcCCCceEEEEEeeeC-------CCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEE
Q 018161 128 CWSGSVTILPGDKPFILYTGIDA-------SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQ 200 (360)
Q Consensus 128 v~sGs~v~~~dg~~~l~YTg~~~-------~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~ 200 (360)
+..++++. .+|+++|||+|+.. ...+++++|+|+++.+ .|+|.+.+||+... + ..+ ||.
T Consensus 192 v~~P~v~~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~G----Pf~r~~~nPi~~~~------~--~~~-~~~ 257 (349)
T cd08992 192 VHDPCLFP-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEG----PYVKSPYNPITNSG------H--ETC-VWQ 257 (349)
T ss_pred eECCEEEE-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCC----CCEeCCCCcccCCC------C--ceE-EEe
Confidence 77777665 79999999999752 1356799999998854 68998889998532 2 236 687
Q ss_pred cCCCeEEEEEeeeeCCccEEEEEEeCCCCCcEEcccccccCCCCCceeeceEEEec
Q 018161 201 APDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (360)
Q Consensus 201 ~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (360)
.++.+-.++.....+++. +..|+|.++|+-.+.+...+...+-.+|||-+.-+
T Consensus 258 -~~~~~~~~~~~d~~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (349)
T cd08992 258 -YKGGIAAMLTTDGPEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDADEDP 310 (349)
T ss_pred -cCCceEEEEeccCCCCce--EEeCCCCccEEEeeeccCCCccccCccCcccccCC
Confidence 556673444433334454 67899999999776544333345566777766554
No 33
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.29 E-value=7e-11 Score=111.62 Aligned_cols=99 Identities=17% Similarity=0.219 Sum_probs=77.8
Q ss_pred eccEEEcCCCceEEEEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecC--CCCCCCcCcCCCeEEEEcCCCeEE
Q 018161 130 SGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP--PNGVKDDMFRDPTTAWQAPDGRWR 207 (360)
Q Consensus 130 sGs~v~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~--p~~~~~~~fRDP~Vv~~~~~g~~~ 207 (360)
.+.++. .+|+++|+|++...+....+++|+|+|+ .+|+|. .+|+|.+ ...++...++||.|+. .+|+|+
T Consensus 2 nP~v~~-~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~-~~~~i~p~~~~~~~~~gv~dP~v~~--~~g~y~ 72 (268)
T cd08993 2 NPAVVY-DNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEID-PDPPVWPPPEDGFEEGGVEDPRIVK--IDDTYY 72 (268)
T ss_pred cCeEEE-ECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEEC-CcceEcCCCCCcccccCccCcEEEE--ECCEEE
Confidence 345666 7999999999876556788999999996 799996 4566543 3345567899999654 588999
Q ss_pred EEEeeee--CCccEEEEEEeCCCCCcEEcccc
Q 018161 208 VLVGGQI--DNEGMAFVYWSWDFIHWTKLDHP 237 (360)
Q Consensus 208 M~~g~~~--~~~G~i~ly~S~Dl~~W~~~~~~ 237 (360)
|++++.. ....++.+++|+|+.+|++.+.+
T Consensus 73 m~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~~ 104 (268)
T cd08993 73 ITYAARPNAPNGTRIGLATTKDFITFERLGTS 104 (268)
T ss_pred EEEEccCCCCCCcEEEEEEeCCcceEEEeccc
Confidence 9998865 34568999999999999998654
No 34
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.29 E-value=1.5e-10 Score=109.69 Aligned_cols=179 Identities=17% Similarity=0.145 Sum_probs=112.7
Q ss_pred CccCCCcceEE-CCEEEEEEEECCCCC----CCCCcceEEEEEeCCcccceecccccCCCCc------------cCCCCe
Q 018161 66 WINDPNGPMYY-KGVYHLFYQYNPLGP----LFGDKMIWAHSVSYDLINWIHLSHALCPSGP------------YDINSC 128 (360)
Q Consensus 66 w~nDPnG~~~~-~G~YHlFyq~~P~~~----~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~------------~d~~gv 128 (360)
|+-||.. +.. +|+|+|+......+. .|........++|+||+||+.++.++..... ....++
T Consensus 1 ~~rDP~v-~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTYV-TLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCeE-EecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 6789984 555 689999987543221 1110245778999999999999988754321 234679
Q ss_pred EeccEEEcCCCceEEEEEeeeCC-CceeEEEEEecCCCCCCcceEEEecCC-ceecCCCCCCCcCcCCCeEEEEcCCCeE
Q 018161 129 WSGSVTILPGDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGN-PVMTPPNGVKDDMFRDPTTAWQAPDGRW 206 (360)
Q Consensus 129 ~sGs~v~~~dg~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~-Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~ 206 (360)
|.+.+.. .+|+++|+|+..... ....+++|+|++.. -.|+..... ++ ..-.||.+ |.+.||+.
T Consensus 80 WAP~v~~-~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~~~~---------~~~iD~~~-f~D~DG~~ 144 (269)
T cd08986 80 WAPELHY-IKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGNKPL---------FPGIDPSL-FEDDDGKV 144 (269)
T ss_pred CCceEEE-ECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCCCCC---------CCccCCce-EEcCCCCE
Confidence 9999887 789999999976432 34567888887764 257764221 11 13479995 55578999
Q ss_pred EEEEeeeeCCccEEEEEEeCCCCCcEEcccccccC----CCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeC
Q 018161 207 RVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSV----QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (360)
Q Consensus 207 ~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~----~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~ 281 (360)
||+++... + .--+.|+.........+... ......|-|.+++.+ | +++|++|..
T Consensus 145 Yl~~~~~~-----i-~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYL~yS~~ 202 (269)
T cd08986 145 YLVWHNTL-----I-ARLKDDLSGLAGDPVRIDPSPTFYKDEIGHEGAFVFKYG--G-------------KYYLFGTAW 202 (269)
T ss_pred EEEeeCCc-----e-EeccCccccccCCcEEEecccccccCCccccccEEEEEC--C-------------EEEEEEeec
Confidence 99987531 1 11245554432111111111 112357999999875 4 778888763
No 35
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.28 E-value=1.4e-10 Score=109.83 Aligned_cols=169 Identities=14% Similarity=0.110 Sum_probs=111.3
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCCc-----------cCCCCeEeccE
Q 018161 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-----------YDINSCWSGSV 133 (360)
Q Consensus 65 gw~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~-----------~d~~gv~sGs~ 133 (360)
+..-||. +++++|+|+||....- + ...+...+|+||+||+.++.++..... .-..++|.+.+
T Consensus 9 ~~~~DP~-v~~~~~~yY~~~t~~~----~--~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v 81 (269)
T cd09001 9 ADYPDPD-VIRVGDDYYMVSTTMH----Y--SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSL 81 (269)
T ss_pred CCCCCCe-EEEECCEEEEEECCcc----c--CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCce
Confidence 4557998 5788999999985421 1 123678899999999999877643221 11347899999
Q ss_pred EEcCCCceEEEEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeee
Q 018161 134 TILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (360)
Q Consensus 134 v~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~ 213 (360)
+. .+|+++|+|+.. ...+.+|+|++.. -.|+.. .++. ...||.+++ +.+|+.||+++..
T Consensus 82 ~~-~~gkyy~yys~~----~~~~~v~~a~~p~----Gpw~~~--~~~~---------~~iDp~~f~-D~dG~~Yl~~~~~ 140 (269)
T cd09001 82 RY-HNGTFYVFFCTN----TGGTYIYTADDPE----GPWTKT--ALDG---------GYHDPSLLF-DDDGTAYLVYGGG 140 (269)
T ss_pred EE-ECCEEEEEEEec----CCCeEEEEcCCCC----CCCcCC--CcCC---------CcccCceEE-cCCCCEEEEeCCC
Confidence 87 799999999985 2356789887763 246542 2221 347999544 4789999999753
Q ss_pred eCCccEEEEEE-eCCCCCcEEcccccccCC--CCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeC
Q 018161 214 IDNEGMAFVYW-SWDFIHWTKLDHPLYSVQ--ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (360)
Q Consensus 214 ~~~~G~i~ly~-S~Dl~~W~~~~~~l~~~~--~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~ 281 (360)
.+.+.+ ++|+.........+.... .....|-|.+++-+ | +++|++|..
T Consensus 141 -----~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--G-------------~YYl~~S~~ 191 (269)
T cd09001 141 -----TIRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN--G-------------YYYIFNIAW 191 (269)
T ss_pred -----cEEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC--C-------------EEEEEEecC
Confidence 234444 667666521111122211 13578999999865 4 677777764
No 36
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.24 E-value=5e-10 Score=106.81 Aligned_cols=188 Identities=15% Similarity=0.134 Sum_probs=117.7
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceeccccc--CCCC-ccCCCCeEeccEEEcCCCceEEEE
Q 018161 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL--CPSG-PYDINSCWSGSVTILPGDKPFILY 145 (360)
Q Consensus 69 DPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al--~P~~-~~d~~gv~sGs~v~~~dg~~~l~Y 145 (360)
||. ++.++++|+|++.... ..+..++|+||++|+....++ .+.. .....++|++.++. .+|+++|+|
T Consensus 2 DP~-v~~~~d~yY~~~T~~~--------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yylyy 71 (288)
T cd08980 2 DPW-VIRHDGYYYFTATTGE--------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELHY-IDGKWYIYF 71 (288)
T ss_pred CCe-EEEECCEEEEEEEeCC--------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEEE-ECCEEEEEE
Confidence 897 5788899999987431 237889999999999865432 2222 13346789999987 799999999
Q ss_pred EeeeC--CCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeC---CccEE
Q 018161 146 TGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID---NEGMA 220 (360)
Q Consensus 146 Tg~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~---~~G~i 220 (360)
+.... ...+++++|++++..++ +..|+.. .+++... + ..-.||.++ . .+|++||+++.... ....+
T Consensus 72 s~~~~~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~-~---~~~iDp~~~-~-ddG~~Yl~~~~~~~~~~~~~~i 142 (288)
T cd08980 72 AAGDGGGNANHRMYVLENAGADPP-TGPWTFK--GRLADPT-D---RWAIDGTVF-E-HNGQLYFVWSGWEGRTNGNQNL 142 (288)
T ss_pred EccCCCCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCC-C---CeeeeeEEE-E-ECCEEEEEEEccCCCCCCCccE
Confidence 97753 24567788888752112 2478873 3444211 1 234699954 4 35999999875431 12345
Q ss_pred EEEEeCCCCCcEEcccc--cccCC----C--CCceeeceEEEeccCCccceeeccCCCCceeEEEEeeCCCceeEEEEEE
Q 018161 221 FVYWSWDFIHWTKLDHP--LYSVQ----E--TGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGT 292 (360)
Q Consensus 221 ~ly~S~Dl~~W~~~~~~--l~~~~----~--~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~~~~~~~Y~vG~ 292 (360)
.+.+.++...+. +.+ +.... . ....|-|.+++.+ | +++|++|........|.+|-
T Consensus 143 ~~~~l~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~--G-------------~yYl~yS~~~~~~~~Y~v~~ 205 (288)
T cd08980 143 YIAKMSNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRN--G-------------KVFLTYSASGSWTPDYCLGL 205 (288)
T ss_pred EEEECCCCCccC--CcceEecCCCCCceecCceeeECcEEEEEC--C-------------EEEEEEECCCCCCCCCEEEE
Confidence 555655433332 222 21111 1 1457999999987 4 67788876543344566553
No 37
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=99.24 E-value=3.5e-10 Score=107.82 Aligned_cols=122 Identities=18% Similarity=0.242 Sum_probs=87.2
Q ss_pred CccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCCccCCCCeEeccEEEcCCCceEEEE
Q 018161 66 WINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (360)
Q Consensus 66 w~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~~l~Y 145 (360)
..-||. +++++|+|+|+..... + ...+...+|+||+||+.++.++.+. ..++|++.++. .+|+++|+|
T Consensus 14 ~~~DP~-i~~~~~~yY~~~t~~~----~--~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~~-~~gkyy~yy 81 (280)
T cd09002 14 DYPDPS-ILRDGEDYYMTHSSFK----Y--TPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLCK-YDGRYYIYF 81 (280)
T ss_pred CCCCCE-EEEECCEEEEEEcchh----c--CCCEEEEECCCcCCceEccccccCC----CCCEEcCeeEE-ECCEEEEEE
Confidence 345997 6888999999765211 1 2357888999999999988877542 35789999887 899999999
Q ss_pred EeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeee
Q 018161 146 TGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (360)
Q Consensus 146 Tg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~ 213 (360)
+........++++|++.+..+ .|++ |+... .....||.|+++ .+|++||+++..
T Consensus 82 s~~~~~~~~~~~va~ad~p~G----pw~~----~~~~~-----~~~~IDp~vf~D-ddG~~Yl~~~~~ 135 (280)
T cd09002 82 PAIPEGGNWTNMVIWADSPEG----PWSK----PIDLK-----IGGCIDPGHVVD-EDGNRYLFLSGG 135 (280)
T ss_pred EeecCCCCceEEEEEECCCCC----CCcC----CEecC-----CCCccCCceEEc-CCCCEEEEECCe
Confidence 987654456788999877642 4654 22111 122369996554 789999998643
No 38
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.07 E-value=7.4e-09 Score=99.50 Aligned_cols=107 Identities=20% Similarity=0.290 Sum_probs=73.4
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCCccCCCCeEeccEEEcCCCceEEEEEe
Q 018161 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTG 147 (360)
Q Consensus 68 nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~~l~YTg 147 (360)
.||. +++++|+|+|+-... + +..+|+||++|+..+.++. ..++|++++.. .+|++|++++.
T Consensus 4 ~DP~-i~~~~g~YY~~~T~~------~-----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~~-~~g~~Y~~~~~ 64 (295)
T cd08982 4 ADPV-VILFKGEYYLFASMS------G-----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVFV-YDGTLYYTAST 64 (295)
T ss_pred CCCe-EEEECCEEEEEEeCC------C-----CeEECCCcCCceECCcccC------CCCcCcCEEEE-ECCEEEEEEeC
Confidence 5998 578899999886531 1 2578999999999988764 45789999987 78886665543
Q ss_pred eeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEee
Q 018161 148 IDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGG 212 (360)
Q Consensus 148 ~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~ 212 (360)
. .+.+|+|.|..++ .|+.. .+. ......||.|+++ .||+.||++|.
T Consensus 65 ~------~~~v~~s~~p~gp---~w~~~--~~~-------~~~~~IDp~vf~D-dDGk~Yl~~g~ 110 (295)
T cd08982 65 Y------NSRIYKTADPLSG---PWEEV--DKS-------FPPGLADPALFID-DDGRLYLYYGC 110 (295)
T ss_pred C------CceEEEeCCCCCC---Ccccc--ccc-------cCCCccCCceEEC-CCCCEEEEEec
Confidence 2 2357888776321 35542 111 1134579996544 78999999875
No 39
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=99.05 E-value=1e-08 Score=96.76 Aligned_cols=202 Identities=16% Similarity=0.298 Sum_probs=127.2
Q ss_pred eeCCCCC---ccCCCcceEECCEEEEEEEECCCCCCCCCcceEE-EEEeCCcccceecccccC---CCCccCCCCeEecc
Q 018161 60 FRPPQNW---INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWA-HSVSYDLINWIHLSHALC---PSGPYDINSCWSGS 132 (360)
Q Consensus 60 ~~p~~gw---~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wg-ha~S~Dlv~W~~~~~al~---P~~~~d~~gv~sGs 132 (360)
+.|..|| +.||-. ++++|+||||-.... .. .|+ ...| |++|+..+.|+. .... ...+.|.+.
T Consensus 14 ~~pk~~~~~~lkDPti-v~~nGkYyvYgT~~~-~~------~~~s~~~S--f~~Ws~~g~A~q~~l~~~~-~~~~fwAPq 82 (303)
T cd08987 14 ISPKSDWIVAIKDPTV-VYYNGRYHVYATTAD-AG------NYGSMYFN--FTDWSQAASATQYYLQNGN-MTGYRVAPQ 82 (303)
T ss_pred ccCCCCCeeeecCCeE-EEECCEEEEEEccCC-CC------Cceeeeec--ccCHhHhccchhhcccCCC-CCcccccCE
Confidence 4566788 679984 788899999977543 11 232 3555 999999887763 1111 234578888
Q ss_pred EEE-cCCCceEEEEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEe
Q 018161 133 VTI-LPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211 (360)
Q Consensus 133 ~v~-~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g 211 (360)
++. .+++++||+|+. . ..++|+|+|..+|+ .|.. .+|++...........-|+.|+ . .+++.||+..
T Consensus 83 Vfyf~pk~kwYL~Yq~-~-----~~~yaTs~dp~~P~--~ws~--~qpl~~~~~~~~~~~~ID~~vI-~-Dd~~~YLff~ 150 (303)
T cd08987 83 VFYFAPQNKWYLIYQW-W-----PAAYSTNSDISNPN--GWSA--PQPLFSGTPNGSPGGWIDFWVI-C-DDTNCYLFFS 150 (303)
T ss_pred EeeeccCCEEEEEEec-C-----ceEEEeCCCCCCCC--ccCC--CcccccCcccCCCCCccceeEE-e-CCCCEEEEEe
Confidence 873 268999999994 1 25689999987774 5776 4788753222223456899964 3 5788888875
Q ss_pred eeeCCccEEEEEEeC-CCCCcEEc-c---cccccCCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeCCCcee
Q 018161 212 GQIDNEGMAFVYWSW-DFIHWTKL-D---HPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHD 286 (360)
Q Consensus 212 ~~~~~~G~i~ly~S~-Dl~~W~~~-~---~~l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~~~~~~ 286 (360)
.. .| .||+|+ .+.+.-.. + ............|.|+++++. | +.+++|++++.+..+.
T Consensus 151 ~d---nG--~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~--G-----------~~~YlmiveA~g~~~~ 212 (303)
T cd08987 151 DD---NG--KLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVK--G-----------QNQYLLIVEAIGSDGG 212 (303)
T ss_pred cC---CC--eEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEEC--C-----------CeEEEEEEEecCCCCC
Confidence 43 35 467763 22222110 0 111112234689999999997 4 2378899988765455
Q ss_pred EEEEEEEeC--CCCeeccC
Q 018161 287 YYVLGTYDP--QMDIFSPD 303 (360)
Q Consensus 287 ~Y~vG~~d~--~~~~f~~~ 303 (360)
.|+++ +.. -.+.|+|.
T Consensus 213 rYfrs-~Ts~Sl~GpWt~~ 230 (303)
T cd08987 213 RYFRS-WTATSLDGPWTPL 230 (303)
T ss_pred CeEEE-EEcCCCCCCceec
Confidence 68887 322 12456554
No 40
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=99.01 E-value=1.5e-08 Score=100.35 Aligned_cols=193 Identities=16% Similarity=0.148 Sum_probs=115.7
Q ss_pred eeCCCCCcc------CCCcceE-ECCEEEEEEEECCCC----CCCCCcceEEEEEeCCcc----cceecccccCCCCcc-
Q 018161 60 FRPPQNWIN------DPNGPMY-YKGVYHLFYQYNPLG----PLFGDKMIWAHSVSYDLI----NWIHLSHALCPSGPY- 123 (360)
Q Consensus 60 ~~p~~gw~n------DPnG~~~-~~G~YHlFyq~~P~~----~~~g~~~~Wgha~S~Dlv----~W~~~~~al~P~~~~- 123 (360)
...+.=|+. |+.|-+. ++|.--+|-+..|.. ..|+ ..|+++.-|++.. +|+..|.++......
T Consensus 49 ~~~~dldVWDsWPLqd~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~-~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~ 127 (428)
T PF02435_consen 49 VMADDLDVWDSWPLQDADGNVVNYNGYQVVFALTADRHEDPDDRHD-DARIYLFYSKDGDNANDGWKNGGPVFPEGASFV 127 (428)
T ss_dssp ECTTE-EEEEEEEEE-TTSSBEEBTTEEEEEEEEE-TT--GGGCSC-GEEEEEEEEETT--SGGG-EEEEESS-TTCCCC
T ss_pred ccccceeeeccceeecccccEEEECCEEEEEEEecCCccCCccccC-CcEEEEEEecCCCCccCCceECcccCCCCCCCC
Confidence 344455655 4444433 588555555655543 2456 8999999999998 999999877655431
Q ss_pred CCCCeEeccEEEcC-CCceEEEEEeeeC--C--CceeEE-----EEEecCCCCCCcceEEEecCCceecCCCCC------
Q 018161 124 DINSCWSGSVTILP-GDKPFILYTGIDA--S--GQQVQN-----LAMPENLSDPLLKDWVKFSGNPVMTPPNGV------ 187 (360)
Q Consensus 124 d~~gv~sGs~v~~~-dg~~~l~YTg~~~--~--~~~~q~-----lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~------ 187 (360)
...--|||||++.. +|++.||||.... . ..|++. ++...+. +..+..|+++ ..|+.+...+
T Consensus 128 ~~s~EWSGSA~l~~~dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~-~v~i~g~~~~--~~lfe~DG~~Yqt~~Q 204 (428)
T PF02435_consen 128 PGSREWSGSATLNNDDGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDD-GVWITGFSNH--HELFEGDGKHYQTYEQ 204 (428)
T ss_dssp GCEEEEEEEEEESTTTSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECST-EEEEEEEEEE--EEEES--SSSB--HHH
T ss_pred ccCcEecCceEEcCCCCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCC-ceeEccccce--eEeeccchhhhhChhh
Confidence 22345999999977 8999999999754 1 223322 2333332 1122344442 4555532211
Q ss_pred -CCcCcCCCeEEEEcCCCeEEEEEeeee--C-------------------------------CccEEEEEEeCC--CCCc
Q 018161 188 -KDDMFRDPTTAWQAPDGRWRVLVGGQI--D-------------------------------NEGMAFVYWSWD--FIHW 231 (360)
Q Consensus 188 -~~~~fRDP~Vv~~~~~g~~~M~~g~~~--~-------------------------------~~G~i~ly~S~D--l~~W 231 (360)
....||||++|.+..+|+-||+.-+.. + ..|+|.|.+.+| +..|
T Consensus 205 ~~~~afRDP~~f~DP~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w 284 (428)
T PF02435_consen 205 NPGYAFRDPHVFEDPEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVW 284 (428)
T ss_dssp HHH---EEEEEEEETTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEE
T ss_pred cCCccccCCeeEECCCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCcc
Confidence 125799999654447899999974322 0 146899999865 4579
Q ss_pred EEcccccccCCCCCceeeceEEEec
Q 018161 232 TKLDHPLYSVQETGMWECPDIFPVS 256 (360)
Q Consensus 232 ~~~~~~l~~~~~~~~wECPdlf~l~ 256 (360)
+...+++.+..-..+.|=|+++.++
T Consensus 285 ~~~~PL~~a~~v~de~ERP~iv~~~ 309 (428)
T PF02435_consen 285 ELLPPLLSANGVNDELERPHIVFMN 309 (428)
T ss_dssp EEEEEEEEETTTBS-EEEEEEEEET
T ss_pred EEeCcceecccccccccCCcEEEEC
Confidence 9986655555556789999999998
No 41
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=98.97 E-value=5.9e-09 Score=98.23 Aligned_cols=147 Identities=20% Similarity=0.279 Sum_probs=111.7
Q ss_pred cceEECCEEEEEEEE------CCCCCCCCCcceEEEEEeCCccc-ceecc-cccCC-CCccCCCCeEeccEEEcCCCceE
Q 018161 72 GPMYYKGVYHLFYQY------NPLGPLFGDKMIWAHSVSYDLIN-WIHLS-HALCP-SGPYDINSCWSGSVTILPGDKPF 142 (360)
Q Consensus 72 G~~~~~G~YHlFyq~------~P~~~~~g~~~~Wgha~S~Dlv~-W~~~~-~al~P-~~~~d~~gv~sGs~v~~~dg~~~ 142 (360)
+++..++++||++.- .+. . ..|.+.|.|+|+++ |+.++ +.+.| ..+++..||..+.++. .+++++
T Consensus 35 av~~~~~~~~~l~Rv~~~yye~~~----~-~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~-I~~~y~ 108 (314)
T COG2152 35 AVVLVGGELLLLYRVVEGYYEDHS----S-ISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTK-IGGRYY 108 (314)
T ss_pred eeEEECCEEEEEEEEeccccccCc----c-ceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEE-ECCEEE
Confidence 578899999999987 333 2 67899999999999 99765 78889 5577888999999987 899999
Q ss_pred EEEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeee---CCccE
Q 018161 143 ILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI---DNEGM 219 (360)
Q Consensus 143 l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~---~~~G~ 219 (360)
|.|||.+ +..+..++|+++|. .+|+|. .+++.+ +.||-.++-+..+|+|.|+---.. ...+.
T Consensus 109 mtYTa~s-~~g~~~~la~t~~f-----~n~~ri--g~i~~p-------dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~n 173 (314)
T COG2152 109 MTYTAYS-DKGPRLALAVTKDF-----LNWERI--GAIFPP-------DNKDAALFPKKINGKYALLHRPVLGEYGMKGN 173 (314)
T ss_pred EEEEecC-CCCcccchhhhhhh-----hhhhhc--ccccCC-------CCCCceEeeEEecCcEEEEEeecccccCccCc
Confidence 9999985 45678889999986 689994 455432 335544322235789999864332 22578
Q ss_pred EEEEEeCCCCCcEEcccccc
Q 018161 220 AFVYWSWDFIHWTKLDHPLY 239 (360)
Q Consensus 220 i~ly~S~Dl~~W~~~~~~l~ 239 (360)
|.+..|+|+++|.....++.
T Consensus 174 iwia~S~dl~~w~~~~~~l~ 193 (314)
T COG2152 174 IWIAFSPDLEHWGIHRKLLG 193 (314)
T ss_pred eEEEEcCCccCCCccceeec
Confidence 99999999999997755443
No 42
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=98.91 E-value=5.8e-08 Score=92.12 Aligned_cols=131 Identities=20% Similarity=0.221 Sum_probs=87.9
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecc--cccCCCCccCCCCeEeccEEEcC-CCceEEEE
Q 018161 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS--HALCPSGPYDINSCWSGSVTILP-GDKPFILY 145 (360)
Q Consensus 69 DPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~--~al~P~~~~d~~gv~sGs~v~~~-dg~~~l~Y 145 (360)
.|. ++..+|+|||||..+... ... ....++|+|+|+++|++.+ +.+.+...++...+-.+.++.+. +|+++|+|
T Consensus 64 sgs-~~~~~g~~~l~YTg~~~~-~~~-~~~i~~A~S~D~~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~ 140 (280)
T cd08995 64 TGS-VIKGEGTYHAFYTGHNLD-GKP-KQVVMHATSDDLITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLL 140 (280)
T ss_pred EeE-EEeeCCEEEEEEEEECCC-CCC-cEEEEEEECCCCCccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEE
Confidence 454 466789999999875432 112 4679999999999999865 33432223333344466777643 58999999
Q ss_pred EeeeC----CCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeee
Q 018161 146 TGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (360)
Q Consensus 146 Tg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~ 214 (360)
.+... ....++.++.|+|. ++|+.. .+++.+.. ...+.-|.+ ++ .+|+|+|+++.+.
T Consensus 141 g~~~~~~~~~~~g~i~~~~S~Dl-----~~W~~~--~~~~~~~~---~~~~E~P~l-~~-~~g~~~L~~s~~~ 201 (280)
T cd08995 141 ATRLLDGPYNRRGCIALFTSKDL-----KNWEYE--EPFYAPGL---YFMPECPDL-FK-MGDWWYLVYSEFS 201 (280)
T ss_pred EeccCCCCCCCCeEEEEEEeCCc-----Ccceec--CceecCCC---cceeecceE-EE-ECCEEEEEEEecc
Confidence 87543 23456778888886 799974 56654322 234678884 55 6899999998764
No 43
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=98.88 E-value=1.5e-08 Score=98.14 Aligned_cols=105 Identities=14% Similarity=0.180 Sum_probs=82.3
Q ss_pred CCCeEeccEEEcCCCc--eEEEEEeeeCCCce-eEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEc
Q 018161 125 INSCWSGSVTILPGDK--PFILYTGIDASGQQ-VQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQA 201 (360)
Q Consensus 125 ~~gv~sGs~v~~~dg~--~~l~YTg~~~~~~~-~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~ 201 (360)
...+|.+.|++ .+|+ ++|+|.+....... ++++|.|+|+ .+|++. .+||+.+...++.....||.|+..
T Consensus 29 ~~~vfNpgai~-~~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~i- 100 (312)
T PF04041_consen 29 PNAVFNPGAIV-FDGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTKI- 100 (312)
T ss_dssp SSEEEEEEEEE-ETTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEEE-
T ss_pred cceEEcCcEEE-ECCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEEE-
Confidence 46799999997 4555 89999887765545 8999999997 799986 689997766666778899998765
Q ss_pred CCCeEEEEEeeeeCCccEEEEEEeCCCCCcEEccccc
Q 018161 202 PDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPL 238 (360)
Q Consensus 202 ~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l 238 (360)
+++|+|++.+......++.+.+|+|+.+|++.+..+
T Consensus 101 -~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~~~ 136 (312)
T PF04041_consen 101 -DDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGKIF 136 (312)
T ss_dssp -TTEEEEEEEEEESSSEEEEEEEESSSSSEEEEECTT
T ss_pred -CCEEEEEEEEecCCCcccceEEccchHhhEEecccc
Confidence 689999999887666788999999999999987543
No 44
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=98.82 E-value=3.8e-08 Score=93.88 Aligned_cols=108 Identities=22% Similarity=0.287 Sum_probs=81.2
Q ss_pred cCCCcceEECCEEEEEEEECCCC----CCCCCcceEEEEEeCCc-cccee-cccccCCCC-ccCCCCeEeccEEEcCCCc
Q 018161 68 NDPNGPMYYKGVYHLFYQYNPLG----PLFGDKMIWAHSVSYDL-INWIH-LSHALCPSG-PYDINSCWSGSVTILPGDK 140 (360)
Q Consensus 68 nDPnG~~~~~G~YHlFyq~~P~~----~~~g~~~~Wgha~S~Dl-v~W~~-~~~al~P~~-~~d~~gv~sGs~v~~~dg~ 140 (360)
-+|. +++.+|+|||||...... ...+ ...+++|+|+|+ -+|++ .+++|.|.. .+|..++..++++..++|+
T Consensus 81 ~~P~-vi~~~g~yyl~Y~~~~~~~~~~~~~~-~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~ 158 (291)
T cd08994 81 HNPT-IKRFDGKYYLYYIGNTDPGPRPGHRN-NQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGS 158 (291)
T ss_pred cCCe-EEEECCEEEEEEEcccCCcccccCCC-CceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCC
Confidence 3776 577899999999976431 1122 578999999994 69998 567777754 3677788999998844899
Q ss_pred eEEEEEeeeCC---CceeEEEEEecCCCCCCcceEEEecCCcee
Q 018161 141 PFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVM 181 (360)
Q Consensus 141 ~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi 181 (360)
++|+|+|.... ..+++++|+|+|.. .+|+|....||+
T Consensus 159 ~~m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 159 YLLVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred EEEEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 99999998642 45788999998863 479997555654
No 45
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.79 E-value=1.9e-07 Score=88.64 Aligned_cols=157 Identities=11% Similarity=0.089 Sum_probs=98.3
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcc-cceecccccCCCCccCCCCeEeccEEEcCCCceEEEE
Q 018161 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (360)
Q Consensus 67 ~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~~l~Y 145 (360)
+..|. +++.+|+|||||..+-.+ .. ...+++|+|+|.. .|++.+..+... ..+..++..+++++++||+++|+|
T Consensus 62 ~waP~-v~~~~g~y~~~y~~~~~~--~~-~~~i~~a~s~~p~g~~~~~~~~~~~~-~~~~~~~~Dp~v~~d~dG~~Yl~~ 136 (287)
T cd08999 62 FWAPD-VSYVNGKYVLYYSARDKG--SG-GQCIGVATADSPLGPFTDHGKPPLCC-PEGEGGAIDPSFFTDTDGKRYLVW 136 (287)
T ss_pred ccCce-EEEECCEEEEEEEeecCC--CC-CEEEEEEECCCCCCCCccCCcceEec-CCCCCCccCCCeEECCCCCEEEEE
Confidence 44665 678899999999876443 12 5779999999964 899865432211 111234567788886699999999
Q ss_pred EeeeCC--CceeEEEE-EecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeee--CC--cc
Q 018161 146 TGIDAS--GQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI--DN--EG 218 (360)
Q Consensus 146 Tg~~~~--~~~~q~lA-~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~--~~--~G 218 (360)
.+.... ..+.+.++ .|.|+ .+|... ...++.+...+....+.-|.+ ++ .+|+|||++.+.. .. .=
T Consensus 137 ~~~~~~~~~~~~i~~~~ls~d~-----~~~~~~-~~~i~~~~~~~~~~~~EgP~i-~k-~~g~yyl~~S~~~~~~~~~~y 208 (287)
T cd08999 137 KSDGNSIGKPTPIYLQELSADG-----LTLTGE-PVRLLRNDEDWEGPLVEAPYL-VK-RGGYYYLFYSAGGCCSGASTY 208 (287)
T ss_pred eccCCCCCCCceEEEEEeCCCC-----ccccCC-cEeeecccccccCCceEeeEE-EE-ECCEEEEEEEcCCccCCCCCE
Confidence 764321 12224444 45554 566542 123333322233345677984 55 5899999997653 11 22
Q ss_pred EEEEEEeCCCC-CcEEccc
Q 018161 219 MAFVYWSWDFI-HWTKLDH 236 (360)
Q Consensus 219 ~i~ly~S~Dl~-~W~~~~~ 236 (360)
++.+++|+++. .|++...
T Consensus 209 ~i~~~~s~~~~Gpw~~~~~ 227 (287)
T cd08999 209 AVGVARSKSLLGPYVKAPG 227 (287)
T ss_pred EEEEEEeCCCcCCcCCCCC
Confidence 57789999976 7887643
No 46
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=98.77 E-value=2.8e-07 Score=86.09 Aligned_cols=156 Identities=16% Similarity=0.150 Sum_probs=98.7
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCCccCCCCeEeccEEEcCCCceEE
Q 018161 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (360)
Q Consensus 64 ~gw~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~~l 143 (360)
.+-+.+|. +++.+|+|||||+....+ .. ....+.|+|+|+.+|....... +.. ....++..++++.+++|+++|
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~--~~-~~~i~~a~s~d~~g~~~~~~~~-~~~-~~~~~~iDp~vf~d~dg~~yl 129 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFD--YN-GSGIGVATSEDPTGPFEDKVIR-PPT-SNNGNSIDPTVFKDDDGKYYL 129 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCC--CC-cccEEEEECCCCCCCccccccC-cCc-cCCCCccCcceEEcCCCCEEE
Confidence 45677898 688999999999987542 22 5679999999999987653211 111 122456788999876799999
Q ss_pred EEEeeeCC-CceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeee--CCccEE
Q 018161 144 LYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI--DNEGMA 220 (360)
Q Consensus 144 ~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~--~~~G~i 220 (360)
+|.+.... ....+.++.+++.. .+.. ..+++..........+..|.+ ++ .+|+|||++.+.. ...-.+
T Consensus 130 ~~~~~~~~~~~~~i~~~~l~~~~-----~~~~--~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~~ 200 (271)
T cd08978 130 YYGSGDPGAGFGGIYISELTDDL-----TKPT--GPPVLSASSGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYNI 200 (271)
T ss_pred EEecccCCCCCCcEEEEEECccc-----cccc--CCceeeeeeccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCceE
Confidence 99875421 23445667666542 2222 233321111112235678995 55 5799999987653 233467
Q ss_pred EEEEeCCCC-CcEEc
Q 018161 221 FVYWSWDFI-HWTKL 234 (360)
Q Consensus 221 ~ly~S~Dl~-~W~~~ 234 (360)
.+++|++.. -|+..
T Consensus 201 ~~~~s~~~~Gp~~~~ 215 (271)
T cd08978 201 GYATSDSIDGPYVKK 215 (271)
T ss_pred EEEECCCCCCCcCcC
Confidence 788888864 46654
No 47
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.74 E-value=1.5e-06 Score=82.92 Aligned_cols=155 Identities=15% Similarity=0.154 Sum_probs=94.4
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcc-cceecccccCCCCccCCCCeEeccEEEcCCCceEE
Q 018161 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (360)
Q Consensus 65 gw~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~~l 143 (360)
..+..|. +++.+|+|||||....... . ....++|+|+|.. .|+..+..+.+.. .....++++.++||+++|
T Consensus 53 ~~~waP~-v~~~~g~yyl~ys~~~~~~--~-~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl 124 (294)
T cd08991 53 RGFWAPE-VYYYNGKFYMYYSANDRDE--K-TEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYL 124 (294)
T ss_pred CcEEccE-EEEECCEEEEEEEeccCCC--C-cceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEE
Confidence 3455787 6889999999998764331 2 5789999999976 7887654433322 234567888877799999
Q ss_pred EEEeeeCCC--ceeEEEEEecCCCCCCcceEEEecC---CceecC-------C-C---CCCCcCcCCCeEEEEcCCCeEE
Q 018161 144 LYTGIDASG--QQVQNLAMPENLSDPLLKDWVKFSG---NPVMTP-------P-N---GVKDDMFRDPTTAWQAPDGRWR 207 (360)
Q Consensus 144 ~YTg~~~~~--~~~q~lA~S~D~~d~~l~~w~k~~~---~Pvi~~-------p-~---~~~~~~fRDP~Vv~~~~~g~~~ 207 (360)
+|+...... ......+.+.|. .+|..... .|+..+ + . ..+.....-|.+ ++ .+|+||
T Consensus 125 ~~~~~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yy 197 (294)
T cd08991 125 YYSRNNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTV-LK-HNGRYY 197 (294)
T ss_pred EEEecCCCCcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEE-EE-ECCEEE
Confidence 998654321 234445566664 34442111 122111 0 0 011223456884 44 589999
Q ss_pred EEEeeee-C-CccEEEEEEeCCC-CCcEEc
Q 018161 208 VLVGGQI-D-NEGMAFVYWSWDF-IHWTKL 234 (360)
Q Consensus 208 M~~g~~~-~-~~G~i~ly~S~Dl-~~W~~~ 234 (360)
|++.+.. . ..=.+.+++|+++ -.|+..
T Consensus 198 l~ys~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 198 LTYSANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred EEEECCCCCCCCceEEEEEcCCCCCCcEec
Confidence 9987543 1 1114677888874 679875
No 48
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=98.66 E-value=7.5e-07 Score=84.33 Aligned_cols=152 Identities=13% Similarity=0.048 Sum_probs=95.6
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcc-cceecccc-cCCCCccCCCCeEeccEEEcCCCceE
Q 018161 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHA-LCPSGPYDINSCWSGSVTILPGDKPF 142 (360)
Q Consensus 65 gw~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~a-l~P~~~~d~~gv~sGs~v~~~dg~~~ 142 (360)
+-+.-|. +++.+|+|||||..... -+ ....++|+|+|.. .|++.+.. +.+ ...+...+..++++++.||+++
T Consensus 62 ~~~wAP~-i~~~~g~yy~yy~~~~~---~~-~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~y 135 (274)
T cd08990 62 GQAWAPD-VVEKNGKYYLYFPARDK---DG-GFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAY 135 (274)
T ss_pred CCcCcCe-EEEECCEEEEEEEeecC---CC-ceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEE
Confidence 4456777 68899999999987643 12 5779999999976 79987643 322 2222234567788887789999
Q ss_pred EEEEeeeCCCceeEEEE-EecCCCCCCcceEEEecCCceecCCC---CCCCcCcCCCeEEEEcCCCeEEEEEeeeeCCcc
Q 018161 143 ILYTGIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPN---GVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218 (360)
Q Consensus 143 l~YTg~~~~~~~~q~lA-~S~D~~d~~l~~w~k~~~~Pvi~~p~---~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~~G 218 (360)
|+|.+. +.+.+| .|.|. .+|+. ...+|..+. ......+.-|.+ ++ .+|+|||++.+.. ..
T Consensus 136 l~~~~~-----~~~~~~~l~~d~-----~~~~~--~~~~i~~~~~~~~~~~~~~EgP~i-~k-~~G~YYl~yS~~~--~~ 199 (274)
T cd08990 136 LYWGGG-----LGLRVAKLKPDM-----LSLKG--EPVEIVITDGAGDELRRFFEAPWV-HK-RNGTYYLSYSTGD--PE 199 (274)
T ss_pred EEECCc-----CCEEEEEeCccc-----cccCC--CcEEEEeccccCCCCCCcccceeE-EE-ECCEEEEEEECCC--Cc
Confidence 999854 223344 44453 56653 122332111 111223456884 55 6899999998753 35
Q ss_pred EEEEEEeCCCC-CcEEccccc
Q 018161 219 MAFVYWSWDFI-HWTKLDHPL 238 (360)
Q Consensus 219 ~i~ly~S~Dl~-~W~~~~~~l 238 (360)
.+.+.+|+++. -|+..+.++
T Consensus 200 ~~~~a~s~~p~GP~~~~g~~~ 220 (274)
T cd08990 200 EIAYATSDSPLGPFTYRGVIL 220 (274)
T ss_pred EEEEEEcCCCCCCcccCcEEe
Confidence 67777888865 477654443
No 49
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=98.65 E-value=8e-07 Score=83.38 Aligned_cols=157 Identities=13% Similarity=0.109 Sum_probs=100.3
Q ss_pred CCccCCCcceEEC-CEEEEEEEECCCCCCCCCcceEEEEEeCCccc-ceeccc-ccCCC--CccCCCCeEeccEEEcCCC
Q 018161 65 NWINDPNGPMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLIN-WIHLSH-ALCPS--GPYDINSCWSGSVTILPGD 139 (360)
Q Consensus 65 gw~nDPnG~~~~~-G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~-W~~~~~-al~P~--~~~d~~gv~sGs~v~~~dg 139 (360)
+-+..|. +++.+ |+|+|||...... .+ ....+.|+|+|+.. |+.... .+.+. ...+...+..++++.+++|
T Consensus 58 ~~~wap~-v~~~~~g~~~l~yt~~~~~--~~-~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG 133 (286)
T cd08772 58 GGIWAPS-IVYIENGKFYLYYTDVSFT--KN-QQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDG 133 (286)
T ss_pred CcEecce-EEEcCCCCEEEEEEeecCC--CC-ceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCC
Confidence 3456777 56777 9999999876431 23 67899999999975 665421 12222 1223345678888886669
Q ss_pred ceEEEEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeee----C
Q 018161 140 KPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI----D 215 (360)
Q Consensus 140 ~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~----~ 215 (360)
+++|+|.+........+.+|.|+|. .+|++....+++.... ....+.-|.+ ++ .+|+|||++.+.. .
T Consensus 134 ~~y~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~-~~-~~g~~yL~~s~~~~~~~~ 204 (286)
T cd08772 134 KWYLVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGL-LK-KNGKYYLFYSINGTGRVD 204 (286)
T ss_pred CEEEEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEE-EE-ECCEEEEEEEcCCCcCCC
Confidence 9999998764333466889999886 5788742221222111 2346678995 44 5799999997654 1
Q ss_pred CccEEEEEEeCC-CCCcEEc
Q 018161 216 NEGMAFVYWSWD-FIHWTKL 234 (360)
Q Consensus 216 ~~G~i~ly~S~D-l~~W~~~ 234 (360)
..-.+.+++|++ +..|+..
T Consensus 205 ~~y~~~~~~~~~~~g~~~~~ 224 (286)
T cd08772 205 STYSIGYARSESDTGPYVPK 224 (286)
T ss_pred CCcceEEEEccCCCCCcccC
Confidence 233566778866 3456544
No 50
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.64 E-value=5.1e-07 Score=85.95 Aligned_cols=89 Identities=24% Similarity=0.356 Sum_probs=62.7
Q ss_pred CCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeee-----CCccEEEEEEeCCCCCcEEcccccccCC-CCCceeec
Q 018161 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----DNEGMAFVYWSWDFIHWTKLDHPLYSVQ-ETGMWECP 250 (360)
Q Consensus 177 ~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~-----~~~G~i~ly~S~Dl~~W~~~~~~l~~~~-~~~~wECP 250 (360)
++|||.+..+ ...+|||+|++...+|+|||+..... .....|.+++|+||.+|+..+..+.... .+.+| ||
T Consensus 5 ~~pvl~~~~g--~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-AP 81 (276)
T cd08983 5 GNPVLTSTAG--TKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-AP 81 (276)
T ss_pred CceEEeCCcC--CCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-Cc
Confidence 6899975433 47899999776546789999876542 1223688999999999998765433222 23456 99
Q ss_pred eEEEeccCCccceeeccCCCCceeEEEEeeC
Q 018161 251 DIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (360)
Q Consensus 251 dlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~ 281 (360)
+++..+..| +|+|.+|..
T Consensus 82 ev~~d~~~g-------------~y~~~~s~~ 99 (276)
T cd08983 82 EAFWDAERG-------------QYVVYWSSR 99 (276)
T ss_pred cceEcCCCC-------------eEEEEEecc
Confidence 999887433 777777753
No 51
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=98.56 E-value=9.2e-07 Score=84.58 Aligned_cols=129 Identities=18% Similarity=0.168 Sum_probs=87.4
Q ss_pred eEEC-CEEEEEEEECCCCCCCCCcceEEEEEeC-Ccccceecccc-cCCCCccCCCCeEeccEEEcCCCceEEEEEeeeC
Q 018161 74 MYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSY-DLINWIHLSHA-LCPSGPYDINSCWSGSVTILPGDKPFILYTGIDA 150 (360)
Q Consensus 74 ~~~~-G~YHlFyq~~P~~~~~g~~~~Wgha~S~-Dlv~W~~~~~a-l~P~~~~d~~gv~sGs~v~~~dg~~~l~YTg~~~ 150 (360)
+..+ |+|+|||..+......+ ....++|+|+ |+++|++.+.. +.+....+..+...+.++. .+|+++|++++...
T Consensus 69 v~~~~g~~~~~YTg~~~~~~~~-~~~~~lA~S~ddg~~w~k~~~~~~~~~~~~~~~~~RDP~V~~-~~g~~~m~~g~~~~ 146 (298)
T cd08996 69 VVDDNGKLVLFYTGNVKLDGGR-RQTQCLAYSTDDGRTFTKYEGNPVIPPPDGYTTHFRDPKVFW-HDGKWYMVLGAGTE 146 (298)
T ss_pred EEcCCCcEEEEEeceeCCCCCc-eEEEEEEEEcCCCCEEEECCCCceEcCCCCCCCcccCCeEEe-ECCEEEEEEEEEec
Confidence 4456 99999998764321122 5678999999 89999986532 2211222334556777776 67999999998765
Q ss_pred CCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCC--CeEEEEEeeee
Q 018161 151 SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPD--GRWRVLVGGQI 214 (360)
Q Consensus 151 ~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~--g~~~M~~g~~~ 214 (360)
+....+.++.|+|+ ++|++. .++.... +.....+.-|.+ ++ .+ ++|+|+++.+.
T Consensus 147 ~~~~~i~ly~S~Dl-----~~W~~~--~~~~~~~-~~~~~~~EcP~l-~~-l~~~~k~vL~~s~~~ 202 (298)
T cd08996 147 DGTGRILLYRSDDL-----KNWEYL--GELLTSL-GDFGYMWECPDL-FP-LDVEGKWVLIFSPQG 202 (298)
T ss_pred CCCcEEEEEECCCC-----CCCEEc--ceecccC-CCccceEeCCcE-EE-ECCCCeEEEEECCCC
Confidence 55567889999986 799984 4443211 112356788995 44 56 99999998764
No 52
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.52 E-value=1.1e-06 Score=83.15 Aligned_cols=74 Identities=16% Similarity=0.186 Sum_probs=52.2
Q ss_pred cCCCeEEEEcCCCeEEEEEeeeeC---------CccEEEEEEeCCCCCcEEcccccccCC--------------CCCcee
Q 018161 192 FRDPTTAWQAPDGRWRVLVGGQID---------NEGMAFVYWSWDFIHWTKLDHPLYSVQ--------------ETGMWE 248 (360)
Q Consensus 192 fRDP~Vv~~~~~g~~~M~~g~~~~---------~~G~i~ly~S~Dl~~W~~~~~~l~~~~--------------~~~~wE 248 (360)
+|||+|+.. .+|.|||+..+... ..+.|.+|+|+||.+|+..+..+...+ .....+
T Consensus 2 ~rDP~v~~~-~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVTLG-PDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEEec-CCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 799996543 67788888765421 124578999999999998876553221 133567
Q ss_pred eceEEEeccCCccceeeccCCCCceeEEEEeeC
Q 018161 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (360)
Q Consensus 249 CPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~ 281 (360)
||+++.++ | +++|.++..
T Consensus 81 AP~v~~~~--g-------------~yyl~~s~~ 98 (269)
T cd08986 81 APELHYIK--G-------------RWYLVACMN 98 (269)
T ss_pred CceEEEEC--C-------------EEEEEEEcc
Confidence 99999987 4 778877754
No 53
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.39 E-value=1.5e-05 Score=75.93 Aligned_cols=154 Identities=14% Similarity=0.138 Sum_probs=92.5
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCc--ccceecccccCCCCccCCCCeEeccEEEcCCCce
Q 018161 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL--INWIHLSHALCPSGPYDINSCWSGSVTILPGDKP 141 (360)
Q Consensus 64 ~gw~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dl--v~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~ 141 (360)
.+-+..|. +++.+|+|||||..+..+. . ....++|+|+|+ -.|+..++++.+........+..++++++++|++
T Consensus 55 ~~~~wAP~-v~~~~g~yyl~ys~~~~~~--~-~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~ 130 (288)
T cd08998 55 SGNLWAPD-VIYLNGKYYLYYSVSTFGS--N-RSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKL 130 (288)
T ss_pred CCCccCCe-EEEECCEEEEEEEEEeCCC--C-ceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCE
Confidence 34456776 6788999999998764332 2 567899999998 7899987666554321233456788888778999
Q ss_pred EEEEEeeeCCCceeEEEE-EecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeee-C---C
Q 018161 142 FILYTGIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-D---N 216 (360)
Q Consensus 142 ~l~YTg~~~~~~~~q~lA-~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~-~---~ 216 (360)
+|+|.+... .+.+| .+.|.+.+ ..+... ...++..+. ...-...|++ ++ .+|+|||++.+.. . .
T Consensus 131 Yl~~~~~~~----~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~~--~~~~~Egp~~-~k-~~g~YYl~~S~~~~~~~~~ 199 (288)
T cd08998 131 WLSFGSFWG----GIFLVELDPKTGKP--LYPGGY-GYNIAGRPR--GHGAIEAPYI-IY-RGGYYYLFVSYGGCCAGED 199 (288)
T ss_pred EEEeeeccC----CEEEEEeCcccCCc--cCCCCc-ceEEeccCC--CCCceeeeEE-EE-eCCEEEEEEEcchhcCCCC
Confidence 999975321 12233 23332111 112100 011222221 1123468994 55 6899999986532 1 1
Q ss_pred cc-EEEEEEeCCCC-CcE
Q 018161 217 EG-MAFVYWSWDFI-HWT 232 (360)
Q Consensus 217 ~G-~i~ly~S~Dl~-~W~ 232 (360)
.+ ++.+++|+++. -|+
T Consensus 200 ~~y~v~~~~s~~~~GP~~ 217 (288)
T cd08998 200 STYNIRVGRSKSITGPYV 217 (288)
T ss_pred CceEEEEEEcCCCCCCcC
Confidence 12 57889998864 365
No 54
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=98.35 E-value=6.2e-06 Score=83.72 Aligned_cols=130 Identities=12% Similarity=0.089 Sum_probs=83.3
Q ss_pred eEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecc-cccCCCCccCCCCeEeccEEEcCCCceEEEEEeeeCCC
Q 018161 74 MYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASG 152 (360)
Q Consensus 74 ~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~-~al~P~~~~d~~gv~sGs~v~~~dg~~~l~YTg~~~~~ 152 (360)
+..+|++||||..+.....+.....-.+|+|+|+.+|++.+ ++|.+.......+.-.+.++. .+|+++|++.+...+.
T Consensus 92 v~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~~~~~~~fRDP~V~~-~~g~~~M~~g~~~~~~ 170 (445)
T TIGR01322 92 VDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPPAGYTAHFRDPKVWK-HNGHWYMVIGAQTETE 170 (445)
T ss_pred EeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCCCCCcCcCCCCcEEe-ECCEEEEEEEEecCCC
Confidence 45789999999976532222212334689999999999876 466543221122334566665 6899999988765433
Q ss_pred ceeEEEEEecCCCCCCcceEEEecCCceecCCC---CCCCcCcCCCeEEEEcCCCeEEEEEeee
Q 018161 153 QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPN---GVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (360)
Q Consensus 153 ~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~---~~~~~~fRDP~Vv~~~~~g~~~M~~g~~ 213 (360)
...+.+..|+|+ ++|+.. .++..+.. +.....+.-|- ++. .+++|+|+++..
T Consensus 171 ~g~i~ly~S~Dl-----~~W~~~--g~~~~~~~~~~~~~g~~~ECPd-lf~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 171 KGSILLYRSKDL-----KNWTFV--GEILGDGQNGLDDRGYMWECPD-LFS-LDGQDVLLFSPQ 225 (445)
T ss_pred ceEEEEEECCCc-----ccCeEe--cccccccccccCCccceEECCe-EEE-ECCcEEEEEecc
Confidence 345567788885 799984 45553320 11123577888 454 678999998754
No 55
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.32 E-value=9.3e-06 Score=77.91 Aligned_cols=77 Identities=14% Similarity=0.137 Sum_probs=55.0
Q ss_pred cCcCCCeEEEEcCCCeEEEEEeeeeCC----ccEEEEEEeCCCCCcEEcccccccCC---CCCceeeceEEEeccCCccc
Q 018161 190 DMFRDPTTAWQAPDGRWRVLVGGQIDN----EGMAFVYWSWDFIHWTKLDHPLYSVQ---ETGMWECPDIFPVSINGTIG 262 (360)
Q Consensus 190 ~~fRDP~Vv~~~~~g~~~M~~g~~~~~----~G~i~ly~S~Dl~~W~~~~~~l~~~~---~~~~wECPdlf~l~~~g~~g 262 (360)
..+|||+|++.+.+|.|||+..+.... ...+.+|+|+||.+|+..+.++.... ......+|+++..+ |
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~--G--- 78 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK--G--- 78 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC--C---
Confidence 458999987655689999988764311 12378999999999998876553322 12457899999876 4
Q ss_pred eeeccCCCCceeEEEEeeC
Q 018161 263 VDTSVLNPGVKHVLKTSLF 281 (360)
Q Consensus 263 ~~~s~~~~~~~~vl~~s~~ 281 (360)
+++|.++..
T Consensus 79 ----------~yyly~s~~ 87 (291)
T cd08981 79 ----------RYYMFATFH 87 (291)
T ss_pred ----------EEEEEEEec
Confidence 778877654
No 56
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=98.27 E-value=9.5e-06 Score=76.82 Aligned_cols=104 Identities=16% Similarity=0.228 Sum_probs=82.2
Q ss_pred CeEeccEEEcCCCceEEEEEeee-----CCCceeEEEEEecCCCCCCcce-EEEecCCceecC-CCCCCCcCcCCCeEEE
Q 018161 127 SCWSGSVTILPGDKPFILYTGID-----ASGQQVQNLAMPENLSDPLLKD-WVKFSGNPVMTP-PNGVKDDMFRDPTTAW 199 (360)
Q Consensus 127 gv~sGs~v~~~dg~~~l~YTg~~-----~~~~~~q~lA~S~D~~d~~l~~-w~k~~~~Pvi~~-p~~~~~~~fRDP~Vv~ 199 (360)
.+|.++++. .+++++|+|.... .....+..+|.|+|+ .+ |++. .+|++.| ...++.....||.|+.
T Consensus 30 ~vFNpav~~-~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e-~ep~~~P~~~~~e~~G~EDPRvt~ 102 (314)
T COG2152 30 SVFNPAVVL-VGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIE-PEPTLWPANYPYEIYGIEDPRVTK 102 (314)
T ss_pred EEecceeEE-ECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecC-CcceEecCCCchhhhcccCceEEE
Confidence 789999987 8999999998743 234677889999997 45 8985 6899876 3344567889999654
Q ss_pred EcCCCeEEEEEeeeeCCccEEEEEEeCCCCCcEEcccccc
Q 018161 200 QAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLY 239 (360)
Q Consensus 200 ~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~ 239 (360)
.+++|+|.+.+..+...+..+..++|+.+|++.+.+..
T Consensus 103 --I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~~ 140 (314)
T COG2152 103 --IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIFP 140 (314)
T ss_pred --ECCEEEEEEEecCCCCcccchhhhhhhhhhhhcccccC
Confidence 58999999999865556778899999999999876544
No 57
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.26 E-value=6.7e-05 Score=71.01 Aligned_cols=143 Identities=9% Similarity=0.059 Sum_probs=87.0
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcc-ccee-cc-cccCCCCccCCCCeEeccEEEcCCCceEE
Q 018161 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIH-LS-HALCPSGPYDINSCWSGSVTILPGDKPFI 143 (360)
Q Consensus 67 ~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv-~W~~-~~-~al~P~~~~d~~gv~sGs~v~~~dg~~~l 143 (360)
+.-|. +++.+|+|+|||..+ ...++|+|+|.. .|+. .+ +.+.+.. .......++++++.||+++|
T Consensus 66 ~wAP~-v~~~~g~yy~yys~~---------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl 133 (275)
T cd09004 66 AWAPS-VIERNGKYYFYFSAN---------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYL 133 (275)
T ss_pred cCCCe-EEEECCEEEEEEEcC---------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEE
Confidence 34565 688899999999863 347899999975 7887 33 3333321 12344677888877899999
Q ss_pred EEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeee-C-CccEEE
Q 018161 144 LYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-D-NEGMAF 221 (360)
Q Consensus 144 ~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~-~-~~G~i~ 221 (360)
+|.+.. ....+..+.|. .+|+.. ..++.... ...+.-|. +++ .+|+|||++.+.. . ..-++.
T Consensus 134 ~~~~~~----~~~i~~l~~d~-----~~~~~~--~~~~~~~~---~~~~EgP~-i~k-~~G~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 134 YWGGWG----HCNVAKLNEDM-----ISFDGE--RDGSEITP---KNYFEGPF-MFK-RNGIYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred EEcCcC----CEEEEEECCCc-----ccccCc--ceeeeccC---CCceecce-EEE-ECCEEEEEEECCCCCCCCceEE
Confidence 996531 11122345554 455531 11221111 12356788 455 6899999987653 1 222577
Q ss_pred EEEeCCCC-CcEEcccc
Q 018161 222 VYWSWDFI-HWTKLDHP 237 (360)
Q Consensus 222 ly~S~Dl~-~W~~~~~~ 237 (360)
+++|++.. -|+....+
T Consensus 198 ya~s~~~~GP~~~~~~~ 214 (275)
T cd09004 198 YAMADSPLGPFERPGNI 214 (275)
T ss_pred EEEcCCCCCCcccCCcE
Confidence 78888864 48776533
No 58
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=98.25 E-value=2.1e-05 Score=74.93 Aligned_cols=78 Identities=18% Similarity=0.374 Sum_probs=55.5
Q ss_pred CCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCCccEEEEEEeCCCCCcEEcccccccCCCCCceeeceEEEec
Q 018161 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (360)
Q Consensus 177 ~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (360)
.||||. ..+.||.|+. .+++|||+..+.. ..+.+.+|+|+||.+|+..+..+.. ...++| +|++++.+
T Consensus 7 ~nPv~~-------~~~~DP~i~~--~~~~yY~~~t~~~-~~~gi~i~~S~DL~~W~~~g~~~~~-~~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSILR--DGEDYYMTHSSFK-YTPGLVIWHSRDLVNWTPVGPALPE-YEGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEEE--ECCEEEEEEcchh-cCCCEEEEECCCcCCceEccccccC-CCCCEE-cCeeEEEC
Confidence 488885 2457999665 4789999765422 2235789999999999988654432 345678 89999876
Q ss_pred cCCccceeeccCCCCceeEEEEeeC
Q 018161 257 INGTIGVDTSVLNPGVKHVLKTSLF 281 (360)
Q Consensus 257 ~~g~~g~~~s~~~~~~~~vl~~s~~ 281 (360)
| |++|.++..
T Consensus 75 --g-------------kyy~yys~~ 84 (280)
T cd09002 75 --G-------------RYYIYFPAI 84 (280)
T ss_pred --C-------------EEEEEEEee
Confidence 4 777777763
No 59
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=98.18 E-value=5.5e-05 Score=74.18 Aligned_cols=149 Identities=17% Similarity=0.208 Sum_probs=93.1
Q ss_pred ECCEEEEEEEECCCCCCC--CCcceEEEEEeCCc----ccceecccccCCCCc-cC-------------CCCeEeccEEE
Q 018161 76 YKGVYHLFYQYNPLGPLF--GDKMIWAHSVSYDL----INWIHLSHALCPSGP-YD-------------INSCWSGSVTI 135 (360)
Q Consensus 76 ~~G~YHlFyq~~P~~~~~--g~~~~Wgha~S~Dl----v~W~~~~~al~P~~~-~d-------------~~gv~sGs~v~ 135 (360)
.+|++||||..+-..... ......++++|+|+ ..|+.+...+.+++. |+ ....-.+.++.
T Consensus 80 ~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~ 159 (349)
T cd08997 80 DDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFE 159 (349)
T ss_pred CCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEe
Confidence 359999999987321110 11567999999998 455444455556542 21 12344666777
Q ss_pred cC-CCceEEEEEeeeCCC---------------------------ceeEEEEEecCCCCCCcceEEEecCCceecCCCCC
Q 018161 136 LP-GDKPFILYTGIDASG---------------------------QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGV 187 (360)
Q Consensus 136 ~~-dg~~~l~YTg~~~~~---------------------------~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~ 187 (360)
++ +|+++|+++++.... .-.++||++++.. |.+|+-. .|++.+.. .
T Consensus 160 d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~d---l~~W~~~--~PL~~a~~-v 233 (349)
T cd08997 160 DPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDD---LTEWKLL--PPLLEANG-V 233 (349)
T ss_pred cCCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCC---CCCcEEc--CccccCCC-c
Confidence 54 588999999876421 1346788776431 4689974 68876432 1
Q ss_pred CCcCcCCCeEEEEcCCCeEEEEEeeeeC-------CccEEEEEEeCCCC-CcEE
Q 018161 188 KDDMFRDPTTAWQAPDGRWRVLVGGQID-------NEGMAFVYWSWDFI-HWTK 233 (360)
Q Consensus 188 ~~~~fRDP~Vv~~~~~g~~~M~~g~~~~-------~~G~i~ly~S~Dl~-~W~~ 233 (360)
...+..|.+ ++ .+|+|||+..++.. ....+..|.|+++. -|+.
T Consensus 234 -~d~~E~P~v-~~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~GP~~~ 284 (349)
T cd08997 234 -NDELERPHV-VF-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDSLRGPYKP 284 (349)
T ss_pred -CCceEcceE-EE-ECCEEEEEEeCCcCccccccCCCCcEEEEEeCCCCCCCcc
Confidence 235789995 55 69999999875541 11235567888875 4654
No 60
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=98.15 E-value=1.4e-05 Score=75.75 Aligned_cols=78 Identities=22% Similarity=0.355 Sum_probs=54.6
Q ss_pred CceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCCccEEEEEEeCCCCCcEEcccccccC---------CCCCcee
Q 018161 178 NPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSV---------QETGMWE 248 (360)
Q Consensus 178 ~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~---------~~~~~wE 248 (360)
||||. ..+.||.|+. .++.|||+.++.....| +.+++|+||.+|+..+..+... ...++|
T Consensus 1 NPvi~-------~~~~DP~ii~--~~~~yY~~~t~~~~~~g-~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSIIR--AGDDYYMASSTFEWFPG-VQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEEE--ECCeEEEEECccccCCC-cEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 57763 3567999765 47899999865432233 6799999999999987654321 123466
Q ss_pred eceEEEeccCCccceeeccCCCCceeEEEEeeC
Q 018161 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (360)
Q Consensus 249 CPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~ 281 (360)
+|+++..+ | ||+|.++..
T Consensus 70 AP~v~~~~--G-------------~yy~yy~~~ 87 (269)
T cd08989 70 APCLSYYD--G-------------KFWLIYTAV 87 (269)
T ss_pred cceEEEEC--C-------------EEEEEEecc
Confidence 99999986 5 677777653
No 61
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=98.06 E-value=4e-05 Score=77.71 Aligned_cols=131 Identities=17% Similarity=0.215 Sum_probs=82.4
Q ss_pred eEECCEEEEEEEECC-CCC--CCCCcceEEEEEeCCcccceec--ccccCCCCccCCCCeEeccEEEcCCCceEEEEEee
Q 018161 74 MYYKGVYHLFYQYNP-LGP--LFGDKMIWAHSVSYDLINWIHL--SHALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (360)
Q Consensus 74 ~~~~G~YHlFyq~~P-~~~--~~g~~~~Wgha~S~Dlv~W~~~--~~al~P~~~~d~~gv~sGs~v~~~dg~~~l~YTg~ 148 (360)
+..+|++||||..+- ..+ ..+....-.+|+|+|+++|++. .++|.+...+.....-.+.++..++|+++|++.+.
T Consensus 75 v~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~~ 154 (437)
T smart00640 75 VIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIGAS 154 (437)
T ss_pred EECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCCCcEEeCCCCCCCCCcCCCCccEECCCEEEEEEEEE
Confidence 446788999998762 211 1220122367889999999997 46665543222233345666663446899998876
Q ss_pred eCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCC-----eEEEEEeee
Q 018161 149 DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG-----RWRVLVGGQ 213 (360)
Q Consensus 149 ~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g-----~~~M~~g~~ 213 (360)
..+..-++.++.|+|+ ++|+.. .+++.+..+.....|..|-+ +. .++ +|+|+++.+
T Consensus 155 ~~~~~G~i~ly~S~Dl-----~~W~~~--~~~~~~~~~~~g~~wECPdl-f~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 155 DEDKTGIALLYRSTDL-----KNWTLL--GELLHSGVGDTGGMWECPDL-FP-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred ecCCCeEEEEEECCCc-----ccCeEC--CcccccCCCCccceEECCcE-EE-eCCCCCceeEEEEECcC
Confidence 6554566788899886 799984 45554311111246778884 43 455 899988765
No 62
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=97.96 E-value=0.00058 Score=64.57 Aligned_cols=146 Identities=15% Similarity=0.217 Sum_probs=88.9
Q ss_pred CccCCCcceEE--CCEEEEEEEECCCCCCCCCcceEEEEEeCCcc-cceecccccCCCCccCCCCeEeccEEEcCCCceE
Q 018161 66 WINDPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (360)
Q Consensus 66 w~nDPnG~~~~--~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~~ 142 (360)
.+.-|. ++|. +|+|||||...... .+ ....++|+|++.. .|+.++..+ |. ......+++++++||+.+
T Consensus 64 ~~waP~-v~y~~~~g~Y~m~~~~~~~~--~~-~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~Y 134 (265)
T cd08985 64 IIERPK-VIYNAKTGKYVMWMHIDSSD--YS-DARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTAY 134 (265)
T ss_pred EEECCe-EEEeCCCCEEEEEEEeCCCC--Cc-ceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCEE
Confidence 344555 4554 59999999986522 23 6789999998874 588765433 21 123456788888899999
Q ss_pred EEEEeeeCCCceeEEEEEe-cCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeC-CccEE
Q 018161 143 ILYTGIDASGQQVQNLAMP-ENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEGMA 220 (360)
Q Consensus 143 l~YTg~~~~~~~~q~lA~S-~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~-~~G~i 220 (360)
|+|.... ...+.++.- .|. ..+. +.+.... .......|. +++ .+|.|||++..... ....+
T Consensus 135 l~~~~~~---~~~i~i~~L~~d~-----~~~~---~~~~~~~----~~~~~EaP~-i~K-~~g~YYL~~S~~t~~~~~~~ 197 (265)
T cd08985 135 LLYSDRD---NSDLYIYRLTDDY-----LSVT---GEVTTVF----VGAGREAPA-IFK-RNGKYYLLTSGLTGWNPNDA 197 (265)
T ss_pred EEEecCC---CCceEEEEeCCCc-----cccc---ceEEEcc----CCCccccce-EEE-ECCEEEEEEccCCCccCCce
Confidence 9998542 123444443 232 2222 2333211 123556898 566 68999999876431 12246
Q ss_pred EEEEeCCCC-CcEEcccc
Q 018161 221 FVYWSWDFI-HWTKLDHP 237 (360)
Q Consensus 221 ~ly~S~Dl~-~W~~~~~~ 237 (360)
..++|+++. -|+..+.+
T Consensus 198 ~y~~s~s~~GP~~~~~~~ 215 (265)
T cd08985 198 RYATATSILGPWTDLGNP 215 (265)
T ss_pred EEEEecCCCCCccccCcC
Confidence 678888864 57766543
No 63
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=97.94 E-value=0.00014 Score=68.66 Aligned_cols=155 Identities=17% Similarity=0.215 Sum_probs=99.2
Q ss_pred CCCccceeeeCCCCCccCCCcceEEC-CEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecc-cccCCCCccCCCCeE
Q 018161 52 QPYLTSYHFRPPQNWINDPNGPMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCPSGPYDINSCW 129 (360)
Q Consensus 52 ~~~rp~~H~~p~~gw~nDPnG~~~~~-G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~-~al~P~~~~d~~gv~ 129 (360)
.+|+..-.+.......-||. ++.++ |+++|+|-..... ... ..-+....+.|..++...+ ..+.+.......++.
T Consensus 104 Gp~~~~~~~~~~~~~~iD~~-vf~d~dG~~Yl~~~~~~~~-~~~-~~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~ 180 (286)
T PF04616_consen 104 GPWTDPGKIPIPGGNSIDPS-VFVDDDGKYYLYYGSWDNG-DPG-GGIYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVV 180 (286)
T ss_dssp S-EEEEEEEEEESSSSSSEE-EEEETTSEEEEEEEESTTT-SSE-EEEEEEEEETTTSSEEEEECEEEEEESGSSTTTBE
T ss_pred cccccccceeeccccccCce-EEEecCCCcEEeCcccCCC-ccc-eeEEeecccCccccccCcccccccccccccCCccc
Confidence 67776666654466777998 56665 9999999875543 111 3345556788898888766 444444433345667
Q ss_pred eccEEEcCCCceEEEEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecC-CCCCCCcCcCCCeEEEEcCCCeEEE
Q 018161 130 SGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP-PNGVKDDMFRDPTTAWQAPDGRWRV 208 (360)
Q Consensus 130 sGs~v~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~-p~~~~~~~fRDP~Vv~~~~~g~~~M 208 (360)
-|+.++..+|+++|+|++........+.+|+|++.. ..|+....+|++.. ........-.-.. ++...+|+|+|
T Consensus 181 Egp~~~k~~g~yYl~~s~~~~~~~y~v~~~~s~~~~----gp~~~~~~~~~~~~~~~~~~~~g~gH~~-~~~~~~g~~~~ 255 (286)
T PF04616_consen 181 EGPFVFKHGGKYYLFYSAGGTGSPYQVGYARSDSPL----GPWEWKKGNPILFSRDGENGVYGPGHGS-VFKDPDGRWYI 255 (286)
T ss_dssp EEEEEEEETTEEEEEEEESGSSTTTEEEEEEESSTT----SGGEETTTCBCEGTTBTTSSCEEEEEEE-EEEETTSEEEE
T ss_pred cceEEEEcCCCEEEEEeccCCCCCceEEEeeccCCC----CceeeccCCeEEEeeccCCccccCccCC-EEECCCCCEEE
Confidence 778877789999999997654444677889999874 35666556777753 1111112222334 44557888998
Q ss_pred EEeeee
Q 018161 209 LVGGQI 214 (360)
Q Consensus 209 ~~g~~~ 214 (360)
++-+..
T Consensus 256 ~yh~~~ 261 (286)
T PF04616_consen 256 VYHARN 261 (286)
T ss_dssp EEEEEE
T ss_pred EEeecc
Confidence 876554
No 64
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=97.92 E-value=0.00047 Score=65.59 Aligned_cols=150 Identities=10% Similarity=0.155 Sum_probs=85.0
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcc-c-----ceecccccCCCCccCCCCeEeccEEEcCCCc
Q 018161 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-N-----WIHLSHALCPSGPYDINSCWSGSVTILPGDK 140 (360)
Q Consensus 67 ~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv-~-----W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~ 140 (360)
+.-|. +++.+|+|||||.....+. . ...++.|+|++.. - |+..++.+.+... .......+++++++||+
T Consensus 57 ~WAP~-v~~~~G~yylyys~~~~~~--~-~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~ 131 (279)
T cd08988 57 LWAPD-IYQHNGKFYLYYSVSAFGS--N-TSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQ 131 (279)
T ss_pred Eecce-EEEECCEEEEEEEeccCCC--C-CceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCC
Confidence 45666 6788999999998765432 1 4578999999863 3 4433344433322 12234677899988899
Q ss_pred eEEEEEeeeCCCceeEEEEEecCCCCCCcceEEEecC-CceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeee-----
Q 018161 141 PFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSG-NPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI----- 214 (360)
Q Consensus 141 ~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~-~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~----- 214 (360)
++|+|.... .+ ...+-.+.|.. ....... ..++..+. ......-|+ +++ .+|+|||++++..
T Consensus 132 ~Yl~~g~~~-~g--i~~~eL~~d~~-----~~~~~~~~~~i~~~~~--~~~~~Egp~-i~k-~~g~YYl~~S~g~~~~~~ 199 (279)
T cd08988 132 PWLSFGSFW-GG--IKLFELDKDTM-----KPAEPGELHSIAGRER--SSAAIEAPF-ILY-RGDYYYLFVSFGLCCRGG 199 (279)
T ss_pred EEEEecccC-CC--EEEEEECcccC-----CccCCCcceEEeccCC--CCCceEeeE-EEE-cCCeEEEEEEcCcccCCC
Confidence 999986432 11 12223334431 1100000 11222111 112345788 556 6899999886532
Q ss_pred CCccEEEEEEeCCCC-CcEE
Q 018161 215 DNEGMAFVYWSWDFI-HWTK 233 (360)
Q Consensus 215 ~~~G~i~ly~S~Dl~-~W~~ 233 (360)
+..-++.+++|+++. -|+.
T Consensus 200 ~~~y~v~~arS~~~~GPy~~ 219 (279)
T cd08988 200 DSTYKIAVGRSKNITGPYLD 219 (279)
T ss_pred CCCeEEEEEEeCCCCCCCCC
Confidence 122357889999864 3543
No 65
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=97.87 E-value=0.00021 Score=72.76 Aligned_cols=163 Identities=20% Similarity=0.323 Sum_probs=91.5
Q ss_pred cCCCcceEECCEEEEEEE---ECCCCCCCCCcceEEEEEeCCcccceecccccCCCCc-------cCCCCeEeccEEEcC
Q 018161 68 NDPNGPMYYKGVYHLFYQ---YNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-------YDINSCWSGSVTILP 137 (360)
Q Consensus 68 nDPnG~~~~~G~YHlFyq---~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~-------~d~~gv~sGs~v~~~ 137 (360)
-||. ++..+.-|+|--. +.| .-.-+.|+||+||+.....|.+... -+..|||++++.. +
T Consensus 31 PDpS-i~rvg~dyYia~stF~~fp---------Gl~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~y-~ 99 (549)
T COG3507 31 PDPS-IVRVGDDYYIATSTFEWFP---------GLAIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLSY-H 99 (549)
T ss_pred CCCc-eEecCCceEEEcceEEEcC---------ceeeeccccccCcEEecccccCcchhhhhcccCCCCceeccceec-C
Confidence 4665 4565555655321 112 1455779999999998776666532 2356899999884 9
Q ss_pred CCceEEEEEeeeCCC---ceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeee
Q 018161 138 GDKPFILYTGIDASG---QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (360)
Q Consensus 138 dg~~~l~YTg~~~~~---~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~ 214 (360)
||+++|+||...... ....+..++.+..+ -.|.. |+..+. ..--||.++++ +||+-+|+.+.-.
T Consensus 100 dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~---G~WsD----pi~l~~-----~~~iDPslf~D-~dGr~wlv~~~w~ 166 (549)
T COG3507 100 DGKFWLYYTDVKRSGGPYKNAGNYLVTAESID---GPWSD----PIKLNG-----SNAIDPSLFFD-KDGRKWLVNGSWD 166 (549)
T ss_pred CCcEEEEEecccccCCcccccccEEEEecCCC---CCccc----ceecCC-----cCccCCceeec-CCCCEEEEecccC
Confidence 999999998665421 11122333322211 25663 444221 12359996655 8899999988754
Q ss_pred CC------ccEEEEEEeC---CCCCcEEcccccccCCCCCceeeceEEEec
Q 018161 215 DN------EGMAFVYWSW---DFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (360)
Q Consensus 215 ~~------~G~i~ly~S~---Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (360)
.+ .+.++-..++ .+..+.+ ..+..+.+....|-|-+++.+
T Consensus 167 ~~~~~~~~~~i~l~~~~~~~~~l~g~~~--~~~~~G~~~~~~EGPhl~k~~ 215 (549)
T COG3507 167 GGIFMHSFAGIILQEYDKTTQKLVGQGY--KIIFDGGNGGLTEGPHLYKKT 215 (549)
T ss_pred CCcccccccceeeeeccccccccCCccc--eeEeccCCCccccCceeeccC
Confidence 21 1222222221 1222211 112233344578999888776
No 66
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=97.86 E-value=0.0017 Score=59.77 Aligned_cols=188 Identities=15% Similarity=0.242 Sum_probs=102.9
Q ss_pred eeCCCCCcc--CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCCccCCCCeEeccEEEc-
Q 018161 60 FRPPQNWIN--DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTIL- 136 (360)
Q Consensus 60 ~~p~~gw~n--DPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~gv~sGs~v~~- 136 (360)
..|+.||.. ||. +|+++|+||+|....-.+..|| -..=.-+-+|.+...|- ..-.+ .+...+.++..
T Consensus 16 ~~Pk~g~~slKD~T-~V~ynGk~~VyAtt~d~~~~y~------sm~f~~Ftdws~~~sA~--q~~m~-~~~vAP~vFYFa 85 (271)
T PF03664_consen 16 AQPKSGWVSLKDFT-IVPYNGKHHVYATTADTGGGYG------SMNFGPFTDWSQMASAS--QNYMD-QSAVAPQVFYFA 85 (271)
T ss_pred ccCCCCceeccCce-EEeECCEEEEEEEeccCCCccc------eEeeeccCCHHHhhccc--cccCC-cccccceEEEec
Confidence 346778854 998 6999999999998764444444 33333455677655432 22122 12334444432
Q ss_pred CCCceEEEEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCC
Q 018161 137 PGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216 (360)
Q Consensus 137 ~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~ 216 (360)
+.+.+||.|--.. ..-...+|+|..++. .|.. ..|++.....-.....-|..||-+ +..-||+....
T Consensus 86 Pk~~W~L~yQwg~----~~fsY~Ts~Dptnpn--gWSa--pq~lf~g~i~~~~~g~iD~~vI~D--~~n~yLFfa~D--- 152 (271)
T PF03664_consen 86 PKNIWYLAYQWGP----AAFSYSTSSDPTNPN--GWSA--PQPLFSGSISGSGTGPIDQWVICD--DTNMYLFFAGD--- 152 (271)
T ss_pred CCcEEEEEEecCC----CcceeecCCCCCCCc--cCCC--CcccccccccCCCCCceeeEEEec--CCceEEEEcCC---
Confidence 5677888886221 111244667776663 5887 366653211111245579987654 33344444432
Q ss_pred ccEEEEEEeCC-CCC----cEEcccccccCCCCCceeeceEEEeccCCccceeeccCCCCceeEEEEeeCCCce
Q 018161 217 EGMAFVYWSWD-FIH----WTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKH 285 (360)
Q Consensus 217 ~G~i~ly~S~D-l~~----W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~g~~~s~~~~~~~~vl~~s~~~~~~ 285 (360)
.|+ ||||.= +.+ +.-....+.++.....+|.++++++. | +.++.|++...+..+
T Consensus 153 nGk--iYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~--G-----------~~~YLmiVEaiGs~g 211 (271)
T PF03664_consen 153 NGK--IYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVK--G-----------QNQYLMIVEAIGSDG 211 (271)
T ss_pred CCc--EEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEc--C-----------CceEEEEEEEecCCC
Confidence 264 688743 222 21111122333345689999999997 4 236777766544333
No 67
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=97.81 E-value=0.0019 Score=62.51 Aligned_cols=147 Identities=12% Similarity=0.125 Sum_probs=86.0
Q ss_pred CCCcceEEC----CEEEEEEEECCCCCCCCCcceEEEEEeCCcc-cceec-cc-ccCCCCc-cC-CCCeEeccEEEcCCC
Q 018161 69 DPNGPMYYK----GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHL-SH-ALCPSGP-YD-INSCWSGSVTILPGD 139 (360)
Q Consensus 69 DPnG~~~~~----G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~-~~-al~P~~~-~d-~~gv~sGs~v~~~dg 139 (360)
-|. +++.+ |+|+|||... ....+.|+|++.. .|+.+ +. .+.+... .+ ...+..+++++++||
T Consensus 80 AP~-v~~~~~~~~gkyylyy~~~--------~~~igva~SdsP~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~DdDG 150 (311)
T cd09003 80 APS-IAVKKINGKGKFYLYFANG--------GGGIGVLTADSPVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDDDG 150 (311)
T ss_pred CCc-eEEeccCCCCEEEEEEecC--------CCeEEEEEcCCCCCCcccCCCCeeecCCCCCccCCccccCCCeEECCCC
Confidence 555 57777 9999999632 2458999999964 79974 32 2222111 11 112467788888899
Q ss_pred ceEEEEEeeeC----CCceeEEEEEec-CCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeee
Q 018161 140 KPFILYTGIDA----SGQQVQNLAMPE-NLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (360)
Q Consensus 140 ~~~l~YTg~~~----~~~~~q~lA~S~-D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~ 214 (360)
+.||+|.+... ...+.+.+|.-+ |. .+ ..+.++....+ ..+.-|. +++ .+|+|||++++..
T Consensus 151 ~~Yl~~g~~~~~~~~~~~~~i~i~~l~~D~-----~~---~~g~~~~i~~~----~~~Egp~-~~K-~~G~YYL~ys~~~ 216 (311)
T cd09003 151 QGYLYFGGGVPGGRWANPNTARVIKLGDDM-----IS---VDGSAVTIDAP----YFFEASG-LHK-INGTYYYSYCTNF 216 (311)
T ss_pred CEEEEECCccCCCccccCCCEEEEEeCCCc-----ee---ccCCceEccCC----CceEeee-EEE-ECCEEEEEEeCCC
Confidence 99999975322 111334455433 32 22 22233322111 2456788 455 7899999987541
Q ss_pred -------CCccEEEEEEeCCCC-CcEEccccc
Q 018161 215 -------DNEGMAFVYWSWDFI-HWTKLDHPL 238 (360)
Q Consensus 215 -------~~~G~i~ly~S~Dl~-~W~~~~~~l 238 (360)
....++.+++|++.. -|+..+.++
T Consensus 217 ~~~~~~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 217 GGRDPGKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred CccCCCCCCceeEEEEEcCCCCCCcccCCEec
Confidence 234467777888754 588754444
No 68
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.81 E-value=0.00067 Score=64.23 Aligned_cols=134 Identities=10% Similarity=0.072 Sum_probs=80.2
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCcc-cceecccccCCCCccCCCCeEeccEEEcCCCceEEEE
Q 018161 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (360)
Q Consensus 67 ~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~~l~Y 145 (360)
+.-|. +++.+|+|||||..+. ...+.++|++.. .|+..+... ....+++++++||+.+|+|
T Consensus 76 ~WAP~-v~~~~gkyy~yys~~~--------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~ 137 (269)
T cd09001 76 QWAPS-LRYHNGTFYVFFCTNT--------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVY 137 (269)
T ss_pred EECCc-eEEECCEEEEEEEecC--------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEe
Confidence 45666 6888999999998751 124567777753 687765322 2345688888899999998
Q ss_pred EeeeCCCceeEEEE-EecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCCccEEEEEE
Q 018161 146 TGIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYW 224 (360)
Q Consensus 146 Tg~~~~~~~~q~lA-~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~~G~i~ly~ 224 (360)
.+. .+.++ .+.|. ..... ....++..+.. ......-|+ +++ .+|+|||++.+.......+.+++
T Consensus 138 ~~~------~i~~~~l~~d~-----~~~~~-~~~~~~~~~~~-~~~~~Egp~-i~k-~~G~YYl~~S~~~~~~~~~~~~~ 202 (269)
T cd09001 138 GGG------TIRLVELSPDL-----TGVGG-KDQVIIDAGEE-IGLGAEGSH-LYK-INGYYYIFNIAWGGGGRTQTCLR 202 (269)
T ss_pred CCC------cEEEEEECccc-----CCcCC-CceEEEeCCCc-cccccccCe-EEE-ECCEEEEEEecCCCCCceEEEEE
Confidence 643 23333 34443 22211 11223333211 113456788 455 68999999876532233567889
Q ss_pred eCCCCC-cEE
Q 018161 225 SWDFIH-WTK 233 (360)
Q Consensus 225 S~Dl~~-W~~ 233 (360)
|+++.. |+.
T Consensus 203 s~~~~GP~~~ 212 (269)
T cd09001 203 SKSLTGPYES 212 (269)
T ss_pred eCCCCCCcCC
Confidence 988653 554
No 69
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.78 E-value=0.0014 Score=62.38 Aligned_cols=142 Identities=13% Similarity=0.151 Sum_probs=78.2
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCC----cccceecccccCCCCccCCCCeEeccEEEcCCCceE
Q 018161 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD----LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (360)
Q Consensus 67 ~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~D----lv~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~~ 142 (360)
+.-|. +++.+|+|||||...-.+.. . ....+.++|++ +-.|+..+..+.+.. .....+++++ .+|+++
T Consensus 55 ~WAP~-i~~~~g~yylyys~~~~~~~-~-~~~~~v~~a~~~~~~~Gpw~~~~~~~~~~~----~~~iDp~~~~-ddG~~Y 126 (288)
T cd08980 55 LWAPE-LHYIDGKWYIYFAAGDGGGN-A-NHRMYVLENAGADPPTGPWTFKGRLADPTD----RWAIDGTVFE-HNGQLY 126 (288)
T ss_pred EECce-EEEECCEEEEEEEccCCCCC-c-ceeEEEEEeCCCCCCCCCceEeeEeccCCC----CeeeeeEEEE-ECCEEE
Confidence 44554 57789999999986533211 1 34566666664 568998765542221 2335677777 569999
Q ss_pred EEEEeeeC--CCceeEEEEEecCCCCCCcceEEEecCCcee-cCC-CCCCC---cCcCCCeEEEEcCCCeEEEEEeeeeC
Q 018161 143 ILYTGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVM-TPP-NGVKD---DMFRDPTTAWQAPDGRWRVLVGGQID 215 (360)
Q Consensus 143 l~YTg~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi-~~p-~~~~~---~~fRDP~Vv~~~~~g~~~M~~g~~~~ 215 (360)
|+|.+... .....+.+|...+. .++. +.++. ..+ ..+.. .-..-|++ ++ .+|.|||++++..-
T Consensus 127 l~~~~~~~~~~~~~~i~~~~l~~~-----~~~~---g~~~~i~~p~~~we~~~~~~~EgP~~-~k-~~G~yYl~yS~~~~ 196 (288)
T cd08980 127 FVWSGWEGRTNGNQNLYIAKMSNP-----WTLT---GPRVLISRPEYDWERQGPGVNEGPAA-LK-RNGKVFLTYSASGS 196 (288)
T ss_pred EEEEccCCCCCCCccEEEEECCCC-----CccC---CcceEecCCCCCceecCceeeECcEE-EE-ECCEEEEEEECCCC
Confidence 99986542 12233445544332 1222 22322 222 22221 12356885 44 57999999986542
Q ss_pred -Ccc-EEEEEEeC
Q 018161 216 -NEG-MAFVYWSW 226 (360)
Q Consensus 216 -~~G-~i~ly~S~ 226 (360)
... ++.+++|+
T Consensus 197 ~~~~Y~v~~a~~~ 209 (288)
T cd08980 197 WTPDYCLGLLTAD 209 (288)
T ss_pred CCCCCEEEEEEEc
Confidence 111 45566654
No 70
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=97.74 E-value=0.0005 Score=64.53 Aligned_cols=150 Identities=19% Similarity=0.203 Sum_probs=90.2
Q ss_pred CccCCCcceE-ECCEEEEEEEECCCCCCCCCcceEEEEEeCC-cccceecccccCCCCccCCCCeEeccEEEcCCCceEE
Q 018161 66 WINDPNGPMY-YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (360)
Q Consensus 66 w~nDPnG~~~-~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~D-lv~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~~l 143 (360)
=..||. +++ .+|+.||||........|. .....+.+|+| +.+|.... .|.+.......+...+.++...+|++++
T Consensus 47 ~~~~p~-~~~~~~g~l~l~~~~~~~~~~~~-~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~~~~~~i~~~~G~l~~ 123 (275)
T PF13088_consen 47 RYGNPS-LVVDPDGRLWLFYSAGSSGGGWS-GSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGPGRGPPIQLPDGRLIA 123 (275)
T ss_dssp EEEEEE-EEEETTSEEEEEEEEEETTESCC-TCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEECSEEEEEEECTTEEEE
T ss_pred cccCcE-EEEeCCCCEEEEEEEccCCCCCC-ceeEEEEEECCCCCCCCCcc-ccccccccceeccceeeeeEecCCCEEE
Confidence 346786 344 4999999996665554444 45555699999 79999854 2322222222344455445557898776
Q ss_pred EEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCCccEEEEE
Q 018161 144 LYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVY 223 (360)
Q Consensus 144 ~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~~G~i~ly 223 (360)
-+... ........+.+|+|++ ++|+... ++.. ....--|.++.. .+|+.+|++... . .+.+.++
T Consensus 124 ~~~~~-~~~~~~~~~~~S~D~G----~tW~~~~--~~~~------~~~~~e~~~~~~-~dG~l~~~~R~~-~-~~~~~~~ 187 (275)
T PF13088_consen 124 PYYHE-SGGSFSAFVYYSDDGG----KTWSSGS--PIPD------GQGECEPSIVEL-PDGRLLAVFRTE-G-NDDIYIS 187 (275)
T ss_dssp EEEEE-SSCEEEEEEEEESSTT----SSEEEEE--ECEC------SEEEEEEEEEEE-TTSEEEEEEEEC-S-STEEEEE
T ss_pred EEeec-cccCcceEEEEeCCCC----ceeeccc--cccc------cCCcceeEEEEC-CCCcEEEEEEcc-C-CCcEEEE
Confidence 53222 2234666788899986 8999742 2210 112234554433 778888777553 2 2367788
Q ss_pred EeCC-CCCcEEc
Q 018161 224 WSWD-FIHWTKL 234 (360)
Q Consensus 224 ~S~D-l~~W~~~ 234 (360)
+|.| ..+|+..
T Consensus 188 ~S~D~G~TWs~~ 199 (275)
T PF13088_consen 188 RSTDGGRTWSPP 199 (275)
T ss_dssp EESSTTSS-EEE
T ss_pred EECCCCCcCCCc
Confidence 8888 7999974
No 71
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.59 E-value=0.0026 Score=60.64 Aligned_cols=146 Identities=15% Similarity=0.044 Sum_probs=85.6
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCc-ccceecccccCCCCccCCCCeEeccEEEcCCCceE
Q 018161 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL-INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (360)
Q Consensus 64 ~gw~nDPnG~~~~~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dl-v~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~~ 142 (360)
.+-+.-|. +++.+|+|||||...... + ....+.++|+|. -.|++. . +.+. .+..++++.+.||+.+
T Consensus 65 ~~~~WAP~-v~~~~g~yy~yy~~~~~~--~--~~~~~v~~s~~p~gpw~~~-~-~~~~------~~iDp~vf~d~dG~~Y 131 (288)
T cd09000 65 SGGIWAPT-IRYHDGTFYLITTNVDGM--K--DGGNFIVTADDPAGPWSDP-V-WLDS------GGIDPSLFFDDDGKVY 131 (288)
T ss_pred CCceEcce-EEEECCEEEEEEEecCCC--C--CCceEEEEeCCCCCCCcCC-E-ecCC------CccCCceeEcCCCCEE
Confidence 33445676 688899999999876532 2 345678899888 368742 2 2222 3456788887789999
Q ss_pred EEEEeeeCC----CceeEEEEEecCCCCCCcceEEEecCCc--eecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeee-C
Q 018161 143 ILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNP--VMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-D 215 (360)
Q Consensus 143 l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~~P--vi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~-~ 215 (360)
|+|...... +...+.++..+.. .++- .+.+ +..... .....-|. +++ .+|+|||++.... .
T Consensus 132 ~~~~~~~~~~~~~~~~~i~~~~l~~~------~~~~-~~~~~~~~~~~~---~~~~Egp~-v~k-~~g~YYl~ys~~~~~ 199 (288)
T cd09000 132 LVGNGWDERRGYNGHGGIWLQEIDLE------TGKL-LGEPKVIWNGTG---GRWPEGPH-LYK-RDGWYYLLIAEGGTG 199 (288)
T ss_pred EEecccCCccccCCCCcEEEEEEccc------cCCC-CCCcEEEEeCCC---CCCcccCe-EEE-ECCEEEEEEecCCCC
Confidence 987654221 1233444433221 1221 1222 222111 12345788 455 6899999986532 2
Q ss_pred CccEEEEEEeCCCC-CcEEc
Q 018161 216 NEGMAFVYWSWDFI-HWTKL 234 (360)
Q Consensus 216 ~~G~i~ly~S~Dl~-~W~~~ 234 (360)
..-.+.+++|+++. -|+..
T Consensus 200 ~~~~v~~~~s~~~~Gp~~~~ 219 (288)
T cd09000 200 YGHSVTVARSRSITGPYEPA 219 (288)
T ss_pred CCeEEEEEEeCCCCCCCccC
Confidence 22367889999976 67764
No 72
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=97.54 E-value=0.0039 Score=60.84 Aligned_cols=152 Identities=20% Similarity=0.203 Sum_probs=93.7
Q ss_pred CCccCCCcceEEC-CEEEEEEEECCCCC-------CCCCcceEEEEEeCCc-ccceecccccCCCCc-cCCCCeE--ecc
Q 018161 65 NWINDPNGPMYYK-GVYHLFYQYNPLGP-------LFGDKMIWAHSVSYDL-INWIHLSHALCPSGP-YDINSCW--SGS 132 (360)
Q Consensus 65 gw~nDPnG~~~~~-G~YHlFyq~~P~~~-------~~g~~~~Wgha~S~Dl-v~W~~~~~al~P~~~-~d~~gv~--sGs 132 (360)
.-..||. ++... |+.+|||...+... .+. ..+..+..|+|. ..|.. +..|.+... .+-...+ .|+
T Consensus 74 ~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~S~D~G~tW~~-p~~l~~~~~~~~~~~~~~~~g~ 150 (351)
T cd00260 74 SRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPS-NAYLVLVYSDDDGITWSS-PRDLTPSVKGDNWAALFTGPGS 150 (351)
T ss_pred CcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCC-ceEEEEEEEEcCCceecC-CccCCccccCcceeEEEecCcC
Confidence 3567898 56666 99999998877642 123 556778888887 89985 333333321 1111222 334
Q ss_pred EEEcCCCceEEEEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEee
Q 018161 133 VTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGG 212 (360)
Q Consensus 133 ~v~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~ 212 (360)
.++..+|++++.+.+....+.....+.+|+|.| ++|+.. .++.. ......|.++-. .+|+.+|+...
T Consensus 151 gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~--~~~~~------~~~~~e~~i~el-~dG~l~~~~R~ 217 (351)
T cd00260 151 GIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLG--EGVND------AGGCSECSVVEL-SDGKLYMYTRD 217 (351)
T ss_pred eEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEEC--CCCCC------CCCCcCCEEEEe-cCCEEEEEEee
Confidence 565578998876554433344566678899876 799863 22111 123356886543 58888877655
Q ss_pred eeCCccEEEEEEeCC-CCCcEEc
Q 018161 213 QIDNEGMAFVYWSWD-FIHWTKL 234 (360)
Q Consensus 213 ~~~~~G~i~ly~S~D-l~~W~~~ 234 (360)
.. .+...++.|.| ..+|+..
T Consensus 218 ~~--~~~~~~~~S~D~G~tWs~~ 238 (351)
T cd00260 218 NS--GGRRPVYESRDMGTTWTEA 238 (351)
T ss_pred CC--CCcEEEEEEcCCCcCcccC
Confidence 42 45667888887 5899865
No 73
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=97.23 E-value=0.011 Score=55.27 Aligned_cols=161 Identities=17% Similarity=0.099 Sum_probs=87.5
Q ss_pred CEEEEEEEECCCCCCCCCcceEEEEEe--CCc-ccceecccccCCCCccCCCCeEeccEEEcCCCceEEEEEeeeCC---
Q 018161 78 GVYHLFYQYNPLGPLFGDKMIWAHSVS--YDL-INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS--- 151 (360)
Q Consensus 78 G~YHlFyq~~P~~~~~g~~~~Wgha~S--~Dl-v~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~~l~YTg~~~~--- 151 (360)
|+...++.. +...+ .......+| +|. .+|.....+..+. .....+..++++.+.+|+++|||+.....
T Consensus 1 G~l~a~~~~---~~~~~-~~d~~i~~S~s~D~G~tWs~~~~v~~~~--~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~ 74 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEG-AIDIVIRRSRSTDGGKTWSEPRIVADGP--KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGW 74 (275)
T ss_dssp SEEEEEEEE---SSCSC-CEEEEEEEECCCCCTTEEEEEEEEETST--BTTCEEEEEEEEEETTSEEEEEEEEEETTESC
T ss_pred CeEEEEEEC---CcccC-CCCEEEEEEEeeCCCCeeCCCEEEeecc--ccCCcccCcEEEEeCCCCEEEEEEEccCCCCC
Confidence 556666665 33334 445555555 988 7899765444433 12244566777766799999999655432
Q ss_pred CceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCCccEEEEEEeCC-CCC
Q 018161 152 GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWD-FIH 230 (360)
Q Consensus 152 ~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~~G~i~ly~S~D-l~~ 230 (360)
....+...+|+|+| ++|+... .|...+........+.+- +.. .+|++++..-........+.++.|+| .++
T Consensus 75 ~~~~~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~-i~~-~~G~l~~~~~~~~~~~~~~~~~~S~D~G~t 146 (275)
T PF13088_consen 75 SGSRIYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPP-IQL-PDGRLIAPYYHESGGSFSAFVYYSDDGGKT 146 (275)
T ss_dssp CTCEEEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEE-EEE-CTTEEEEEEEEESSCEEEEEEEEESSTTSS
T ss_pred CceeEEEEEECCCC----CCCCCcc--ccccccccceeccceeee-eEe-cCCCEEEEEeeccccCcceEEEEeCCCCce
Confidence 12233348999976 8999852 333221111112233432 222 58877776322222334555666665 789
Q ss_pred cEEcccccccCCCCCceeeceEEEec
Q 018161 231 WTKLDHPLYSVQETGMWECPDIFPVS 256 (360)
Q Consensus 231 W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (360)
|+....+. .....-.|.+++++
T Consensus 147 W~~~~~~~----~~~~~~e~~~~~~~ 168 (275)
T PF13088_consen 147 WSSGSPIP----DGQGECEPSIVELP 168 (275)
T ss_dssp EEEEEECE----CSEEEEEEEEEEET
T ss_pred eecccccc----ccCCcceeEEEECC
Confidence 99764321 11122346666666
No 74
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=97.12 E-value=0.014 Score=55.76 Aligned_cols=143 Identities=15% Similarity=0.241 Sum_probs=78.3
Q ss_pred cCCCcceEE--CCEEEEEEEECCCCCCCCCcceEEEEEeCCcc---cceecccccCCCCccCCCCeEeccEEEcCCCceE
Q 018161 68 NDPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI---NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (360)
Q Consensus 68 nDPnG~~~~--~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv---~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~~ 142 (360)
.-|. ++|+ +++|+|+||+.+ ...+||+|.. .|....+...........+...-.+ +.+|++.|
T Consensus 79 wAPq-Vfyf~pk~kwYL~Yq~~~----------~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~Y 146 (303)
T cd08987 79 VAPQ-VFYFAPQNKWYLIYQWWP----------AAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCY 146 (303)
T ss_pred ccCE-EeeeccCCEEEEEEecCc----------eEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEE
Confidence 4676 5655 599999999721 4689999975 4776554433221111123333344 56899999
Q ss_pred EEEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCC--eEEEEEeeeeCCccE-
Q 018161 143 ILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG--RWRVLVGGQIDNEGM- 219 (360)
Q Consensus 143 l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g--~~~M~~g~~~~~~G~- 219 (360)
|||.+.+ + ++..|-...+ +|-..-..++.....+-...-|.-|. |++ .+| +|+|++-+...+.++
T Consensus 147 Lff~~dn--G--~iyra~~~~~------nFp~~~~~~~~~~~~~~~~~lfEa~~-Vyk-v~G~~~YlmiveA~g~~~~rY 214 (303)
T cd08987 147 LFFSDDN--G--KLYRSSTTLG------NFPNGGTETVIIMSDSNKNNLFEASN-VYK-VKGQNQYLLIVEAIGSDGGRY 214 (303)
T ss_pred EEEecCC--C--eEEEEecchh------hCCCCCCccEEEecCCCccccceeeE-EEE-ECCCeEEEEEEEecCCCCCCe
Confidence 9998643 2 4444433221 22221122332211111224577888 465 455 999999776421221
Q ss_pred EEEEEeCCCC-CcEEc
Q 018161 220 AFVYWSWDFI-HWTKL 234 (360)
Q Consensus 220 i~ly~S~Dl~-~W~~~ 234 (360)
..-++|+.|- .|+..
T Consensus 215 frs~Ts~Sl~GpWt~~ 230 (303)
T cd08987 215 FRSWTATSLDGPWTPL 230 (303)
T ss_pred EEEEEcCCCCCCceec
Confidence 1226677764 69876
No 75
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=97.09 E-value=0.013 Score=56.59 Aligned_cols=114 Identities=18% Similarity=0.240 Sum_probs=71.0
Q ss_pred EEcCCCceEEEEEeeeCC---CceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEE
Q 018161 134 TILPGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLV 210 (360)
Q Consensus 134 v~~~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~ 210 (360)
++..+|+|+|||--+... +...-+.|+|+|. ++|+.. .++|.+...++....--..++.. +++.+|++
T Consensus 15 ~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dl-----v~W~~~--~~aL~P~~~~d~~g~~SGs~~~~--~~~~~~~Y 85 (308)
T PF00251_consen 15 LVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDL-----VHWEHL--PVALPPDEEYDADGCFSGSAVVD--DDNLVLFY 85 (308)
T ss_dssp EEEETTEEEEEEEEETTSSSS-SBEEEEEEESSS-----SSEEEE--EEEE-SSSGGGTTEEEEEEEEEE--TTCEEEEE
T ss_pred CeEeCCEEEEEeccCCCCcccceeEEEEEECCCC-----CCceeC--CceEcccccCCcCccCcceEEEE--CCEEEEEE
Confidence 334799999999766432 3456789999996 899985 46665543333222333443333 45788888
Q ss_pred eeeeC-CccEEEEEEe-CCCCCcEEcc--cccccC---CCCCceeeceEEEec
Q 018161 211 GGQID-NEGMAFVYWS-WDFIHWTKLD--HPLYSV---QETGMWECPDIFPVS 256 (360)
Q Consensus 211 g~~~~-~~G~i~ly~S-~Dl~~W~~~~--~~l~~~---~~~~~wECPdlf~l~ 256 (360)
.+... ......++.| +|..+|++.. .++... .....+.=|.+|...
T Consensus 86 Tg~~~~~~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~~~~~~RDP~v~~~~ 138 (308)
T PF00251_consen 86 TGNNRDGKQVQCLAYSTDDGITWTKYPQGNPVIPEPPPGDTTDFRDPKVFWRE 138 (308)
T ss_dssp EEEETTTEEEEEEEEESSTTSSEEE-TTTCESBESSSTTSCTSEEEEEEEEEC
T ss_pred eccCCCCCeEEEEEEECCCCCceEEcCCCCcEEEecccCCCCccccCeEEEec
Confidence 77653 2445667777 8899999864 444332 233467778886554
No 76
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=96.90 E-value=0.012 Score=56.69 Aligned_cols=80 Identities=11% Similarity=0.119 Sum_probs=49.5
Q ss_pred CeEeccEEEcCCCceEEEEEeeeCC-CceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCe
Q 018161 127 SCWSGSVTILPGDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205 (360)
Q Consensus 127 gv~sGs~v~~~dg~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~ 205 (360)
++.-|+.+...+|+++|+|++.... ....+++|+|++.-+ .|++...+||+..+.+. ...--... +++..+|+
T Consensus 159 ~~~EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p~G----P~~~~~~~pil~~~~~~-~~g~GH~s-~v~~~~G~ 232 (295)
T cd08982 159 PWMEGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSPLG----PFTYQPHNPFSYKPGGF-ITGAGHGS-TFQDKYGN 232 (295)
T ss_pred ccccccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCCCC----CCCcCCCCccccCCCCe-EecCCccc-EEECCCCC
Confidence 3556777776899999999864322 334678999987643 56665567887543221 01112233 34557888
Q ss_pred EEEEEee
Q 018161 206 WRVLVGG 212 (360)
Q Consensus 206 ~~M~~g~ 212 (360)
|++++-+
T Consensus 233 ~~~~yh~ 239 (295)
T cd08982 233 YWHVGTM 239 (295)
T ss_pred EEEEEEE
Confidence 8887643
No 77
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=96.17 E-value=1.3 Score=43.04 Aligned_cols=146 Identities=14% Similarity=0.136 Sum_probs=82.3
Q ss_pred cceEEEEEeCCc-ccceecccccCCCCccCCCCeEeccEEEcCCCceEEEEEeeeCC----------CceeEEEEEecCC
Q 018161 96 KMIWAHSVSYDL-INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS----------GQQVQNLAMPENL 164 (360)
Q Consensus 96 ~~~Wgha~S~Dl-v~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~~l~YTg~~~~----------~~~~q~lA~S~D~ 164 (360)
.+......|+|. .+|.... ++..... ....+..++.+.+.+|+++|||...... ....+.+..|+|.
T Consensus 45 ~~~iv~~~S~D~G~tW~~~~-~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~ 122 (351)
T cd00260 45 AIDIVARRSTDGGKTWSPST-VISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDD 122 (351)
T ss_pred ccceeEEEeccCCCcccccE-EehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcC
Confidence 356777888875 8999854 3333322 2345677888874449999999765431 2346778899987
Q ss_pred CCCCcceEEEecCCceecCC--CCCCCcCcCCC--eEEEEcCCCeEEEEEeeeeCC--ccEEEEEEeCCCCCcEEccccc
Q 018161 165 SDPLLKDWVKFSGNPVMTPP--NGVKDDMFRDP--TTAWQAPDGRWRVLVGGQIDN--EGMAFVYWSWDFIHWTKLDHPL 238 (360)
Q Consensus 165 ~d~~l~~w~k~~~~Pvi~~p--~~~~~~~fRDP--~Vv~~~~~g~~~M~~g~~~~~--~G~i~ly~S~Dl~~W~~~~~~l 238 (360)
+ ++|.+. ..+.... ..+ ..-++-| -++ . .+|+++|.+-..... .-...+|..++.++|+.. ...
T Consensus 123 G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~-l-~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~-~~~ 192 (351)
T cd00260 123 G----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQ-M-KDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLG-EGV 192 (351)
T ss_pred C----ceecCC--ccCCccccCcce-eEEEecCcCeEE-e-cCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEEC-CCC
Confidence 6 799863 2332211 111 1122333 222 2 478887765443321 223334444557999864 332
Q ss_pred ccCCCCCceeeceEEEec
Q 018161 239 YSVQETGMWECPDIFPVS 256 (360)
Q Consensus 239 ~~~~~~~~wECPdlf~l~ 256 (360)
.. ...+.| |.++++.
T Consensus 193 ~~--~~~~~e-~~i~el~ 207 (351)
T cd00260 193 ND--AGGCSE-CSVVELS 207 (351)
T ss_pred CC--CCCCcC-CEEEEec
Confidence 11 123445 7899996
No 78
>PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A.
Probab=94.69 E-value=0.24 Score=48.08 Aligned_cols=144 Identities=18% Similarity=0.221 Sum_probs=70.6
Q ss_pred CCCcceEECCEEEEEE-EECCCCCCCCCcce--EEEEEeCCc-ccceecccccCCC-CccCCCCeE--eccEEEcCCCce
Q 018161 69 DPNGPMYYKGVYHLFY-QYNPLGPLFGDKMI--WAHSVSYDL-INWIHLSHALCPS-GPYDINSCW--SGSVTILPGDKP 141 (360)
Q Consensus 69 DPnG~~~~~G~YHlFy-q~~P~~~~~g~~~~--Wgha~S~Dl-v~W~~~~~al~P~-~~~d~~gv~--sGs~v~~~dg~~ 141 (360)
.|-- +-.++..+|+. .++... + ... .-++.|+|- +.|.+....+... .... ..+ -||.|+.+||++
T Consensus 62 rPTt-vvkgn~IymLvG~y~~~~---~-~~~~~llLvks~~~g~~W~~~~~l~~~~~~~~~--~figgGGSGV~m~dGTL 134 (310)
T PF13859_consen 62 RPTT-VVKGNKIYMLVGSYSRSA---G-ADDWGLLLVKSTDGGIKWGDTKSLPSTSFQSWK--QFIGGGGSGVVMEDGTL 134 (310)
T ss_dssp EEEE-EEETTEEEEEEEEESS-----S-STTEEEEEEEEESSSSEE---EE-GGGS-EEEE--EEEE-SEE-EE-TTS-E
T ss_pred eeee-eecceeEEEEEEEEeccc---c-ccccceeeeeccCCcceeeecccCCchhccccc--eeecCCCCceEEcCCCE
Confidence 4542 33456666666 444322 2 223 346677765 6798743222111 1111 111 234455589998
Q ss_pred EEEEEeeeCCCc-eeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeeeCCccEE
Q 018161 142 FILYTGIDASGQ-QVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMA 220 (360)
Q Consensus 142 ~l~YTg~~~~~~-~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~~~~G~i 220 (360)
++=-.+...++. ..-.|.+|+|.+ .+|+-..+ ......+||.|+-. ++|+-.|+.... .|+-
T Consensus 135 VFPv~a~~~~~~~~~SlIiYS~d~g----~~W~lskg---------~s~~gC~~psv~EW-e~gkLlM~~~c~---~g~r 197 (310)
T PF13859_consen 135 VFPVQATKKNGDGTVSLIIYSTDDG----KTWKLSKG---------MSPAGCSDPSVVEW-EDGKLLMMTACD---DGRR 197 (310)
T ss_dssp EEEEEEEETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE--TTEEEEEEE-T---TS--
T ss_pred EEEEeeeccCccceEEEEEEECCCc----cceEeccc---------cCCCCcceEEEEec-cCCeeEEEEecc---cceE
Confidence 876677665555 366788899865 78986321 11246689997744 578888876543 2444
Q ss_pred EEEEeCCC-CCcEEccc
Q 018161 221 FVYWSWDF-IHWTKLDH 236 (360)
Q Consensus 221 ~ly~S~Dl-~~W~~~~~ 236 (360)
.+|+|.|. ..|+..-+
T Consensus 198 rVYeS~DmG~tWtea~g 214 (310)
T PF13859_consen 198 RVYESGDMGTTWTEALG 214 (310)
T ss_dssp -EEEESSTTSS-EE-TT
T ss_pred EEEEEcccceehhhccC
Confidence 68999885 78997543
No 79
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=93.48 E-value=1.6 Score=45.13 Aligned_cols=150 Identities=14% Similarity=0.144 Sum_probs=76.3
Q ss_pred CCCCCccCCCcceEECCEEEEEEEECCCCC-CCCCcceEEEEEeCC-cccceecccccCCCCccCCCCeEeccEEEcCCC
Q 018161 62 PPQNWINDPNGPMYYKGVYHLFYQYNPLGP-LFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPGD 139 (360)
Q Consensus 62 p~~gw~nDPnG~~~~~G~YHlFyq~~P~~~-~~g~~~~Wgha~S~D-lv~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg 139 (360)
|.+|=+.-|+ +.|+||+|+|+|..-+... .|- +.+--..+.++ .=.|.+ ++.+ +.. +.+.+|.+.|+||
T Consensus 86 ~~S~giWAPd-l~y~dGkfwl~ytdvk~~~g~~k-~~~nyl~t~~s~~G~WsD-pi~l-~~~-----~~iDPslf~D~dG 156 (549)
T COG3507 86 PYSGGIWAPD-LSYHDGKFWLYYTDVKRSGGPYK-NAGNYLVTAESIDGPWSD-PIKL-NGS-----NAIDPSLFFDKDG 156 (549)
T ss_pred CCCCceeccc-eecCCCcEEEEEecccccCCccc-ccccEEEEecCCCCCccc-ceec-CCc-----CccCCceeecCCC
Confidence 5566666777 6799999999996544432 222 33333333222 124654 2222 221 2466789999999
Q ss_pred ceEEEEEeeeCC--CceeEEEEEecCCCCCCcceEEEecCC--ceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeee-
Q 018161 140 KPFILYTGIDAS--GQQVQNLAMPENLSDPLLKDWVKFSGN--PVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI- 214 (360)
Q Consensus 140 ~~~l~YTg~~~~--~~~~q~lA~S~D~~d~~l~~w~k~~~~--Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~- 214 (360)
+.+|+|-+.... ....-.+-.+.... .+ .+..+. .++-. +.+..--.-|. +++ ++|-|||+.+...
T Consensus 157 r~wlv~~~w~~~~~~~~~~~i~l~~~~~----~~-~~l~g~~~~~~~~--G~~~~~~EGPh-l~k-~~gYYYL~~a~gG~ 227 (549)
T COG3507 157 RKWLVNGSWDGGIFMHSFAGIILQEYDK----TT-QKLVGQGYKIIFD--GGNGGLTEGPH-LYK-KTGYYYLYVAEGGL 227 (549)
T ss_pred CEEEEecccCCCcccccccceeeeeccc----cc-cccCCccceeEec--cCCCccccCce-eec-cCCEEEEEEEcCCC
Confidence 999999887642 11111111221110 01 121111 11211 11112224566 566 7788888775432
Q ss_pred CCcc-EEEEEEeCCCC
Q 018161 215 DNEG-MAFVYWSWDFI 229 (360)
Q Consensus 215 ~~~G-~i~ly~S~Dl~ 229 (360)
...| .+.++||+.+.
T Consensus 228 t~~gh~~~vaRSKsid 243 (549)
T COG3507 228 TTYGHAIRVARSKSID 243 (549)
T ss_pred CccceeEEEEeccCCC
Confidence 2222 57789998764
No 80
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=93.04 E-value=0.65 Score=42.40 Aligned_cols=101 Identities=23% Similarity=0.386 Sum_probs=65.7
Q ss_pred eEECC-EEEEEEEECCCCCCCCCcceEEEEEeCCcccceec--ccccC-CCCccCCCCeE--eccEEEcCCCceEEEEEe
Q 018161 74 MYYKG-VYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL--SHALC-PSGPYDINSCW--SGSVTILPGDKPFILYTG 147 (360)
Q Consensus 74 ~~~~G-~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~--~~al~-P~~~~d~~gv~--sGs~v~~~dg~~~l~YTg 147 (360)
++++| .|+++-|..|.-. | +..+..|.-.+ -|+-. ++.|. |.-+|+..|.| .|.+|+.++|++.+-|++
T Consensus 138 feh~gk~yyvwaqkdp~i~--g-nsniyiaemen--pwtikgepvmlskpe~dwe~~gfwvnegpav~k~ngkifi~ysa 212 (324)
T COG3940 138 FEHNGKLYYVWAQKDPNIK--G-NSNIYIAEMEN--PWTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIFITYSA 212 (324)
T ss_pred eeeCCEEEEEEeccCCCcc--C-CcceEEEeccC--CceecCceEEecCCCcccEEEEEEecCCceEEEECCEEEEEEec
Confidence 55666 6888889888654 4 55566554333 47754 34443 34466777755 688888789999999998
Q ss_pred eeCCCceeEEEEEe---cCCCCCCcceEEEecCCceec
Q 018161 148 IDASGQQVQNLAMP---ENLSDPLLKDWVKFSGNPVMT 182 (360)
Q Consensus 148 ~~~~~~~~q~lA~S---~D~~d~~l~~w~k~~~~Pvi~ 182 (360)
...+-....++-+. .|.-|+ .+|+|. ..||+.
T Consensus 213 satd~nycmgllwanen~dlldp--aswtks-ptpvf~ 247 (324)
T COG3940 213 SATDVNYCMGLLWANENSDLLDP--ASWTKS-PTPVFK 247 (324)
T ss_pred cccccceeeeeeeecccCCcCCc--hhcccC-CCccee
Confidence 76554555565544 333344 479995 678884
No 81
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=91.23 E-value=6.2 Score=40.65 Aligned_cols=96 Identities=14% Similarity=0.155 Sum_probs=59.1
Q ss_pred CCCceEEEEEeeeC---CCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeee
Q 018161 137 PGDKPFILYTGIDA---SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (360)
Q Consensus 137 ~dg~~~l~YTg~~~---~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~ 213 (360)
.+|+|++||--+.. .+...=+.|+|+|. .+|+.. .++|.|...++.....-=.+|-+ .++.+.|+-|..
T Consensus 50 ~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dl-----v~W~~~--piaL~Pd~~~d~~g~ySGSAV~~-~~~l~lfytg~v 121 (486)
T COG1621 50 FDGKYHLFYQYNPFGAAHGPKHWGHAVSKDL-----VHWEHL--PIALAPDDDYDSHGCYSGSAVVD-DGNLSLFYTGNV 121 (486)
T ss_pred ECCEEEEEEecCCCCCCCCCceeeeeccCCc-----ccceEC--CceecCCCccccCCceeeeEEEe-CCcEEEEEccce
Confidence 68999999986542 23445578999986 899973 34555554444444444443433 455666665544
Q ss_pred eC----CccEEEEEEeCCCCCcEEc-cccccc
Q 018161 214 ID----NEGMAFVYWSWDFIHWTKL-DHPLYS 240 (360)
Q Consensus 214 ~~----~~G~i~ly~S~Dl~~W~~~-~~~l~~ 240 (360)
.+ +.-.=.++.|+|..++++. +.++..
T Consensus 122 ~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i~~ 153 (486)
T COG1621 122 RDSNGIRQQTQCIAYSEDGGTFEKYSGNPIID 153 (486)
T ss_pred eccCCcceeEEEEEEEcCCCceEeccCCceec
Confidence 31 1222347789998888873 555543
No 82
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=90.60 E-value=8.6 Score=38.87 Aligned_cols=129 Identities=14% Similarity=0.211 Sum_probs=80.1
Q ss_pred CCEEEEEEEECCCC-CCCCC----cceEEEEEeCC----cccceecccccCCCCccCC-------CCeEeccEEEc-CCC
Q 018161 77 KGVYHLFYQYNPLG-PLFGD----KMIWAHSVSYD----LINWIHLSHALCPSGPYDI-------NSCWSGSVTIL-PGD 139 (360)
Q Consensus 77 ~G~YHlFyq~~P~~-~~~g~----~~~Wgha~S~D----lv~W~~~~~al~P~~~~d~-------~gv~sGs~v~~-~dg 139 (360)
+|+..|||.....+ ..-.. ...-+++.+.| +..|+.+.+.+.+++.+-+ ...-.+.++.+ .+|
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G 222 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDG 222 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTT
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCC
Confidence 69999999983321 10000 23455666666 4567877788888864221 34457788886 589
Q ss_pred ceEEEEEeeeCC--------------------------------CceeEEEEEecCCCCCCcceEEEecCCceecCCCCC
Q 018161 140 KPFILYTGIDAS--------------------------------GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGV 187 (360)
Q Consensus 140 ~~~l~YTg~~~~--------------------------------~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~ 187 (360)
+.||+|.|+... ..-.++||..++.. +..|+-+ .|+|... .+
T Consensus 223 ~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~---~~~w~~~--~PL~~a~-~v 296 (428)
T PF02435_consen 223 KRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDD---GTVWELL--PPLLSAN-GV 296 (428)
T ss_dssp EEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTT---TSEEEEE--EEEEEET-TT
T ss_pred cEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCC---CCccEEe--Ccceecc-cc
Confidence 999999998631 01347899887753 2468875 5888532 11
Q ss_pred CCcCcCCCeEEEEcCCCeEEEEEeeee
Q 018161 188 KDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (360)
Q Consensus 188 ~~~~fRDP~Vv~~~~~g~~~M~~g~~~ 214 (360)
.....=|.||++ +|+|||+..++.
T Consensus 297 -~de~ERP~iv~~--~gkyYLFt~s~~ 320 (428)
T PF02435_consen 297 -NDELERPHIVFM--NGKYYLFTISHL 320 (428)
T ss_dssp -BS-EEEEEEEEE--TTEEEEEEEEEG
T ss_pred -cccccCCcEEEE--CCEEEEEEEecc
Confidence 234445887765 899999987765
No 83
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=88.56 E-value=25 Score=34.19 Aligned_cols=156 Identities=13% Similarity=0.129 Sum_probs=85.6
Q ss_pred CccCCCcceEECCEEEEEEEECCC----CCCCCCcceEEEEEeCC-cccceecccccCCCCccCCCCe------EeccEE
Q 018161 66 WINDPNGPMYYKGVYHLFYQYNPL----GPLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSC------WSGSVT 134 (360)
Q Consensus 66 w~nDPnG~~~~~G~YHlFyq~~P~----~~~~g~~~~Wgha~S~D-lv~W~~~~~al~P~~~~d~~gv------~sGs~v 134 (360)
..-=|.+.|-.+|+-+|.|...-. ...|. .-.=+.+.|+| ..+|+..+..+.+....- .|+ |.-++.
T Consensus 93 ~t~iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~-tn~S~i~~S~D~G~tW~~~~~~~~~~~~~~-~g~~~~~~~fq~~a~ 170 (316)
T PF13810_consen 93 TTVIPTDGISVGGRQYLHYMSVRNWGNVPGSWT-TNYSGIAYSDDNGETWTVVPGTIRPNSPFH-PGFNQGNWNFQMAAF 170 (316)
T ss_pred eEEcccceEEECCcEEEEEEEEccCCCCCCccc-cCceEEEEeCCCCCCceeCCCccccccccc-CCccccccccccccc
Confidence 444578888899999999986421 11233 33456889999 689999986665554111 111 222334
Q ss_pred EcCCCceEEEEEeeeCCCceeEEEEEec--CCCCCC------cce--EEEecC--CceecCCCCCCCcCcCCCeEEEEcC
Q 018161 135 ILPGDKPFILYTGIDASGQQVQNLAMPE--NLSDPL------LKD--WVKFSG--NPVMTPPNGVKDDMFRDPTTAWQAP 202 (360)
Q Consensus 135 ~~~dg~~~l~YTg~~~~~~~~q~lA~S~--D~~d~~------l~~--w~k~~~--~Pvi~~p~~~~~~~fRDP~Vv~~~~ 202 (360)
...||-+|+|=|...+ .....||... +..|+. ... |.+... .||+..+ +---.|.|.+.
T Consensus 171 ~~~dgyVYv~gt~~~R--~g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~-------vgElSv~~~~~ 241 (316)
T PF13810_consen 171 VKDDGYVYVYGTPFGR--NGGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGP-------VGELSVRYNEY 241 (316)
T ss_pred cCCCCEEEEEeCCCCC--CCcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCC-------ccceEEEEeCC
Confidence 3355656666554332 2233455432 111110 012 543211 3555322 22335567667
Q ss_pred CCeEEEEEeeeeCCccEEEEEEeCCCC-CcEEc
Q 018161 203 DGRWRVLVGGQIDNEGMAFVYWSWDFI-HWTKL 234 (360)
Q Consensus 203 ~g~~~M~~g~~~~~~G~i~ly~S~Dl~-~W~~~ 234 (360)
.|+|+|++... ..+.|.+.++++.. .|+..
T Consensus 242 ~gk~Vl~~~~~--~~~~I~~RtA~~P~GpWs~~ 272 (316)
T PF13810_consen 242 LGKWVLSYFDA--GTGGIVLRTAPSPTGPWSEP 272 (316)
T ss_pred CCEEEEEEecc--cCCcEEEEecCCCCCCCCCC
Confidence 89999998643 33567788888876 58743
No 84
>PTZ00334 trans-sialidase; Provisional
Probab=87.15 E-value=6.7 Score=42.62 Aligned_cols=88 Identities=19% Similarity=0.176 Sum_probs=55.1
Q ss_pred ccEEEcCCCceEEEEEeeeCCCceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEE
Q 018161 131 GSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLV 210 (360)
Q Consensus 131 Gs~v~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~ 210 (360)
||.|+..||++++=-.+...++...-.|.+|+|.+ .|+=.. +......+||.|+-. ++|+-.|+.
T Consensus 263 GSGI~medGTLVFPv~a~~~~g~~vslIiYS~d~g-----~W~ls~---------g~s~~gC~~P~I~EW-e~gkLlM~t 327 (780)
T PTZ00334 263 GSGVQMKDGTLVFPVEGTKKDGKAVSLIIYSSATE-----SGNLSK---------GMSADGCSDPSVVEW-KEGKLMMMT 327 (780)
T ss_pred cCeEEecCCeEEEEEEEEcCCCCEEEEEEEecCCC-----CeEEcC---------CCCCCCCCCCEEEEE-cCCeEEEEE
Confidence 44455589997755555554455555677888863 475321 122246799997643 468877766
Q ss_pred eeeeCCccEEEEEEeCCC-CCcEEccc
Q 018161 211 GGQIDNEGMAFVYWSWDF-IHWTKLDH 236 (360)
Q Consensus 211 g~~~~~~G~i~ly~S~Dl-~~W~~~~~ 236 (360)
.... |+=.+|+|.|. ..|+..-.
T Consensus 328 ~C~d---G~RrVYES~DmG~tWtEAlG 351 (780)
T PTZ00334 328 ACDD---GRRRVYESGDKGDSWTEALG 351 (780)
T ss_pred EeCC---CCEEEEEECCCCCChhhCCC
Confidence 5432 43368999985 78996643
No 85
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=85.55 E-value=31 Score=32.40 Aligned_cols=70 Identities=21% Similarity=0.369 Sum_probs=39.6
Q ss_pred CCCcceEE--CCEEEEEEEECCCCCCCCCcceEEEEEeCCccc---ceecccccCCCCc-cCCCCeEeccEEEcCCCceE
Q 018161 69 DPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLIN---WIHLSHALCPSGP-YDINSCWSGSVTILPGDKPF 142 (360)
Q Consensus 69 DPnG~~~~--~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~---W~~~~~al~P~~~-~d~~gv~sGs~v~~~dg~~~ 142 (360)
-|. ++|+ +..++|.||+.+ ......||+|.-+ |....+ |..+.. ....|...--+|- ++-..|
T Consensus 78 AP~-vFYFaPk~~W~L~yQwg~--------~~fsY~Ts~DptnpngWSapq~-lf~g~i~~~~~g~iD~~vI~-D~~n~y 146 (271)
T PF03664_consen 78 APQ-VFYFAPKNIWYLAYQWGP--------AAFSYSTSSDPTNPNGWSAPQP-LFSGSISGSGTGPIDQWVIC-DDTNMY 146 (271)
T ss_pred cce-EEEecCCcEEEEEEecCC--------CcceeecCCCCCCCccCCCCcc-cccccccCCCCCceeeEEEe-cCCceE
Confidence 455 5666 789999999743 3356778999854 775332 322211 0112222223332 455678
Q ss_pred EEEEeee
Q 018161 143 ILYTGID 149 (360)
Q Consensus 143 l~YTg~~ 149 (360)
||+++-+
T Consensus 147 LFfa~Dn 153 (271)
T PF03664_consen 147 LFFAGDN 153 (271)
T ss_pred EEEcCCC
Confidence 8988754
No 86
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=82.43 E-value=7.7 Score=37.74 Aligned_cols=94 Identities=13% Similarity=0.283 Sum_probs=54.3
Q ss_pred cCCCceEEEEEeeeCCC-------ceeEEEEEecCCCCCCcceEEEecCCceecCC---CCCCCcCcCCCeEEEEcCCCe
Q 018161 136 LPGDKPFILYTGIDASG-------QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP---NGVKDDMFRDPTTAWQAPDGR 205 (360)
Q Consensus 136 ~~dg~~~l~YTg~~~~~-------~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p---~~~~~~~fRDP~Vv~~~~~g~ 205 (360)
..+|+.||.|..+..-+ .....||.|+|.+ .+|++.+ ..+-... .+...........-+. .++.
T Consensus 102 ~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G----~tW~~~~-~~~~~~~~~~~g~~~~~~~fq~~a~~-~~dg 175 (316)
T PF13810_consen 102 SVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNG----ETWTVVP-GTIRPNSPFHPGFNQGNWNFQMAAFV-KDDG 175 (316)
T ss_pred EECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCC----CCceeCC-CcccccccccCCcccccccccccccc-CCCC
Confidence 37899999999875311 1246799999976 7999963 2222221 1111000111111233 3566
Q ss_pred EEEEEeeeeCCccEEEEEEe-----CCCCCcEEcc
Q 018161 206 WRVLVGGQIDNEGMAFVYWS-----WDFIHWTKLD 235 (360)
Q Consensus 206 ~~M~~g~~~~~~G~i~ly~S-----~Dl~~W~~~~ 235 (360)
|+-++|....+.|.+.|+|. .|+..|++-.
T Consensus 176 yVYv~gt~~~R~g~~~LaRV~~~~i~d~~ayeyw~ 210 (316)
T PF13810_consen 176 YVYVYGTPFGRNGGVYLARVPPDDILDRSAYEYWD 210 (316)
T ss_pred EEEEEeCCCCCCCcEEEEEeCHHHCCChhhccccC
Confidence 87778876555677788885 3555677653
No 87
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=73.18 E-value=20 Score=36.94 Aligned_cols=90 Identities=21% Similarity=0.313 Sum_probs=57.3
Q ss_pred CCCceEEEEEeeeCC---CceeEEEEEecCCCCCCcceEEEecCCceecCCCCCC-CcCcCCCeEEEEcCCCeEEEEEee
Q 018161 137 PGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVK-DDMFRDPTTAWQAPDGRWRVLVGG 212 (360)
Q Consensus 137 ~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~-~~~fRDP~Vv~~~~~g~~~M~~g~ 212 (360)
.+|.|+|||--+... +...=+.|+|+|. ++|+.+ .|.|.|.+..+ ...|---.+ .. .+|+=.|++.+
T Consensus 68 ykG~yHLFyQyNP~gavwg~ivWGHavSkDL-----inW~~l--p~Ai~Ps~~~ding~wSGSat-i~-~~~~~vilytg 138 (571)
T KOG0228|consen 68 YKGKYHLFYQYNPKGAVWGNIVWGHAVSKDL-----INWEAL--PPAIAPSEWFDINGCWSGSAT-ID-PNNSPVILYTG 138 (571)
T ss_pred cCcEEEEEEecCCCCceeeeeEeeeecchhh-----cccccc--CcccCCCCccccCccccceEE-Ec-cCCCeEEEecc
Confidence 789999999876543 3355578999996 899985 46665543221 223333333 33 57778888766
Q ss_pred eeCCccEEEEEEe-CC-----CCCcEEcc
Q 018161 213 QIDNEGMAFVYWS-WD-----FIHWTKLD 235 (360)
Q Consensus 213 ~~~~~G~i~ly~S-~D-----l~~W~~~~ 235 (360)
-..+..+|..|.- .| ++.|...+
T Consensus 139 ~d~~~rqVqn~a~p~d~sdp~l~~w~k~~ 167 (571)
T KOG0228|consen 139 IDPNNRQVQNYAYPKDVSDPQLIAWSKDG 167 (571)
T ss_pred cCcCceEEEEEeccCCCCchhhheeecCC
Confidence 6555567777763 22 45677654
No 88
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=71.57 E-value=85 Score=28.99 Aligned_cols=171 Identities=16% Similarity=0.236 Sum_probs=88.6
Q ss_pred cCCCcceEE-CCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCC--ccCCCCeEeccEEEcCCCceEEE
Q 018161 68 NDPNGPMYY-KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG--PYDINSCWSGSVTILPGDKPFIL 144 (360)
Q Consensus 68 nDPnG~~~~-~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~--~~d~~gv~sGs~v~~~dg~~~l~ 144 (360)
.||.. ..+ || |+.|-..-|. .. ......|.|-+++.=. .|+++.... .--..-+|.+-+-. .+|++|++
T Consensus 14 adp~i-ykh~dg-~yyftasvpe---yd-rie~rraktleglr~a-epvvvwrk~esgpms~liwapeih~-ingkwyiy 85 (324)
T COG3940 14 ADPMI-YKHNDG-YYYFTASVPE---YD-RIEVRRAKTLEGLRNA-EPVVVWRKHESGPMSNLIWAPEIHF-INGKWYIY 85 (324)
T ss_pred cCceE-EEccCc-cEEEEeccCc---cc-eeeeeeccchhhhhcc-CceeEEeccCCCchhhcccccceeE-EcceEEEE
Confidence 48863 333 67 5555444443 33 6778888887765411 233333221 11124567777655 79999999
Q ss_pred EEeeeC----CC-ceeEEEEEecCCCCCCcceEEEecCCceecCCCCCCCcCcCCCeEEEEcCCCeEEEEEeeee-CCcc
Q 018161 145 YTGIDA----SG-QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DNEG 218 (360)
Q Consensus 145 YTg~~~----~~-~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~fRDP~Vv~~~~~g~~~M~~g~~~-~~~G 218 (360)
|.+... .+ .+....+.-....+|+...|... +-|..+ +++ .--|... |. .+|+-|.++..+. +-.|
T Consensus 86 faaa~ta~~k~g~f~hrmfvlene~anpltg~w~ek--gqikt~---wes-fsldatt-fe-h~gk~yyvwaqkdp~i~g 157 (324)
T COG3940 86 FAAAPTANIKDGTFNHRMFVLENENANPLTGNWVEK--GQIKTA---WES-FSLDATT-FE-HNGKLYYVWAQKDPNIKG 157 (324)
T ss_pred EeecCcccccccccceeEEEEecCCCCCCcccceec--ceeccc---hhc-ceeeeee-ee-eCCEEEEEEeccCCCccC
Confidence 987543 11 23333444333334555567652 333322 211 1136663 43 4666665665444 3334
Q ss_pred EEEEEEeCCCCCcEEcccccccCCCCCceeeceEEE
Q 018161 219 MAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFP 254 (360)
Q Consensus 219 ~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~ 254 (360)
.-.+|..+=-.-|+-.++++.-......|||--+.-
T Consensus 158 nsniyiaemenpwtikgepvmlskpe~dwe~~gfwv 193 (324)
T COG3940 158 NSNIYIAEMENPWTIKGEPVMLSKPELDWEIKGFWV 193 (324)
T ss_pred CcceEEEeccCCceecCceEEecCCCcccEEEEEEe
Confidence 334555443346998877643222334688876553
No 89
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=53.35 E-value=10 Score=30.16 Aligned_cols=15 Identities=27% Similarity=0.261 Sum_probs=8.3
Q ss_pred cCchhhHHHHHHHHH
Q 018161 9 MTSPALMVLLCCFLL 23 (360)
Q Consensus 9 ~~~~~~~~~~~~~~~ 23 (360)
|.|-++++|.++|.+
T Consensus 1 MaSK~~llL~l~LA~ 15 (95)
T PF07172_consen 1 MASKAFLLLGLLLAA 15 (95)
T ss_pred CchhHHHHHHHHHHH
Confidence 566666665554433
No 90
>PF02012 BNR: BNR/Asp-box repeat; InterPro: IPR002860 Members of this entry contain multiple BNR (bacterial neuraminidase repeat) repeats or Asp-boxes. The repeats are short, however the repeats are never found closer than 40 residues together suggesting that the repeat is structurally longer. These repeats are found in a variety of non-homologous proteins, including bacterial ribonucleases, sulphite oxidases, reelin, netrins, sialidases, neuraminidases, some lipoprotein receptors, and a variety of glycosyl hydrolases [].; PDB: 2JKB_A 2VW0_A 2VW2_A 2VW1_A 2CN2_D 2CN3_B 2VK7_B 2VK5_A 2VK6_A 2BF6_A ....
Probab=38.34 E-value=25 Score=17.24 Aligned_cols=11 Identities=27% Similarity=0.522 Sum_probs=7.2
Q ss_pred EecCCCCCCcceEEE
Q 018161 160 MPENLSDPLLKDWVK 174 (360)
Q Consensus 160 ~S~D~~d~~l~~w~k 174 (360)
+|+|+| .+|++
T Consensus 2 ~S~D~G----~TW~~ 12 (12)
T PF02012_consen 2 YSTDGG----KTWKK 12 (12)
T ss_dssp EESSTT----SS-EE
T ss_pred EeCCCc----ccCcC
Confidence 578876 78874
No 91
>PRK13684 Ycf48-like protein; Provisional
Probab=30.48 E-value=5.1e+02 Score=25.08 Aligned_cols=15 Identities=27% Similarity=0.410 Sum_probs=11.7
Q ss_pred EEEEeCC-CCCcEEcc
Q 018161 221 FVYWSWD-FIHWTKLD 235 (360)
Q Consensus 221 ~ly~S~D-l~~W~~~~ 235 (360)
.+|+|.| .++|+...
T Consensus 153 ~i~~S~DgG~tW~~~~ 168 (334)
T PRK13684 153 AIYRTTDGGKNWEALV 168 (334)
T ss_pred eEEEECCCCCCceeCc
Confidence 3788988 58999764
No 92
>smart00815 AMA-1 Apical membrane antigen 1. Apical membrane antigen 1 (AMA-1) is a Plasmodium asexual blood-stage antigen. It has been suggested that positive selection operates on the AMA-1 gene in regions coding for antigenic sites.
Probab=25.31 E-value=78 Score=29.42 Aligned_cols=63 Identities=16% Similarity=0.080 Sum_probs=37.8
Q ss_pred CcCcCCCeEEEEcCCCeEEEEE-eeeeCC-----------cc---EEEEEEeCCCCCcEEcccccccCCCCCceeeceEE
Q 018161 189 DDMFRDPTTAWQAPDGRWRVLV-GGQIDN-----------EG---MAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIF 253 (360)
Q Consensus 189 ~~~fRDP~Vv~~~~~g~~~M~~-g~~~~~-----------~G---~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf 253 (360)
...+|-|+ ||+..+..=+|++ .++.+. .. |.....|.+..+|.|.+..+... ..=-|| -+
T Consensus 120 ns~YR~Pa-VYD~k~~~C~ILy~~~Qen~G~ryC~~~~~~~~~~~Cf~P~Ks~~~knl~Y~Ss~vr~D---we~kCP-r~ 194 (240)
T smart00815 120 NSKYRYPF-VYDSDDKLCYILYVAAQENQGPRYCSNDEEGTSSLFCFKPDKSKEDAHLYYGSKNVRDD---WEEVCP-RK 194 (240)
T ss_pred Cceeecce-EEcCCCCeEEEeehhhhhccCCcccccCCCCCccceeccccccccccceeeeecccccc---hhhhCc-cc
Confidence 46799999 6886666556655 343311 11 23344577788899887655321 112499 67
Q ss_pred Eec
Q 018161 254 PVS 256 (360)
Q Consensus 254 ~l~ 256 (360)
+|.
T Consensus 195 pLk 197 (240)
T smart00815 195 PLR 197 (240)
T ss_pred ccc
Confidence 776
No 93
>smart00602 VPS10 VPS10 domain.
Probab=24.95 E-value=8.4e+02 Score=25.93 Aligned_cols=27 Identities=15% Similarity=0.072 Sum_probs=18.7
Q ss_pred EEEeeeeCCccEEEEEEeCCCCCcEEc
Q 018161 208 VLVGGQIDNEGMAFVYWSWDFIHWTKL 234 (360)
Q Consensus 208 M~~g~~~~~~G~i~ly~S~Dl~~W~~~ 234 (360)
|+++...+..+.+.+|.|.|..+|...
T Consensus 181 l~va~~~~~~~~~~l~VS~Dg~~f~~a 207 (612)
T smart00602 181 LFVAVTDEDTTSRKLYVSNDRSTFAMA 207 (612)
T ss_pred EEEEEecCCCCeEEEEEECCCCcceEE
Confidence 344333334566889999999999865
No 94
>PF15240 Pro-rich: Proline-rich
Probab=24.72 E-value=43 Score=29.85 Aligned_cols=19 Identities=26% Similarity=0.394 Sum_probs=10.6
Q ss_pred hHHHHHHHHHHhcCCcccc
Q 018161 14 LMVLLCCFLLIANGAHQSE 32 (360)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~ 32 (360)
|+|+||+..||+++++++.
T Consensus 1 MLlVLLSvALLALSSAQ~~ 19 (179)
T PF15240_consen 1 MLLVLLSVALLALSSAQST 19 (179)
T ss_pred ChhHHHHHHHHHhhhcccc
Confidence 3555555566666555543
No 95
>PTZ00449 104 kDa microneme/rhoptry antigen; Provisional
Probab=23.29 E-value=2.7e+02 Score=29.33 Aligned_cols=53 Identities=23% Similarity=0.370 Sum_probs=35.1
Q ss_pred CCEEEEEEEECCCCCCCCCcceEEEEEeCCcccceecccccCCCCccCCCCeEeccEEEcCCCceEEEEEee
Q 018161 77 KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (360)
Q Consensus 77 ~G~YHlFyq~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~gv~sGs~v~~~dg~~~l~YTg~ 148 (360)
.|.=+|-.|+.|.-. ....+--|.|-|+....-| |++.+|. .++.+||.|--.
T Consensus 57 agvkylq~q~~~~v~-------ihk~veg~iviwen~~~pl-----------yt~aivt-~n~~pymayve~ 109 (943)
T PTZ00449 57 AGVKYLQLQHGPGVN-------IHKLVEGDIVIWENAEMPL-----------YTCAIVT-NNDGPYMAYVEL 109 (943)
T ss_pred ccceeEEeecCCCcc-------eeEeeeccEEEEecCCCcc-----------eeEEEEe-cCCCCeeeeeee
Confidence 577778888877443 4447788999998754332 6766655 556667766543
No 96
>PF05777 Acp26Ab: Drosophila accessory gland-specific peptide 26Ab (Acp26Ab); InterPro: IPR008392 This family consists of accessory gland-specific 26Ab peptides or male accessory gland secretory protein 355B from different Drosophila species. Drosophila males, like males of most other insects, transfer a group of specific proteins (Acp26Ab and Acp26Aa in Drosophila) to the females during mating. These proteins are produced primarily in the accessory gland and are likely to influence the female's reproduction [].; GO: 0007617 mating behavior, 0005576 extracellular region
Probab=20.25 E-value=67 Score=24.72 Aligned_cols=26 Identities=27% Similarity=0.422 Sum_probs=18.2
Q ss_pred CCCCCccceeeeCCCCCccCCCcceEE
Q 018161 50 ANQPYLTSYHFRPPQNWINDPNGPMYY 76 (360)
Q Consensus 50 ~~~~~rp~~H~~p~~gw~nDPnG~~~~ 76 (360)
.+...|..|-+.-... +||-+|.+.+
T Consensus 39 i~G~LRTlydy~VqD~-vnd~~G~lv~ 64 (90)
T PF05777_consen 39 INGMLRTLYDYNVQDN-VNDASGQLVH 64 (90)
T ss_pred HhhhHhHHhhcccccc-cccCCceEEE
Confidence 5567788888775554 5888886543
Done!