Query 018167
Match_columns 360
No_of_seqs 213 out of 1490
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 10:59:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018167.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018167hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w85_B Pyruvate dehydrogenase 100.0 1.1E-70 3.9E-75 529.9 31.4 320 39-360 2-324 (324)
2 1umd_B E1-beta, 2-OXO acid deh 100.0 3.3E-70 1.1E-74 526.7 30.7 321 38-360 2-324 (324)
3 2bfd_B 2-oxoisovalerate dehydr 100.0 1.1E-69 3.8E-74 526.3 29.5 321 36-360 17-342 (342)
4 1ik6_A Pyruvate dehydrogenase; 100.0 7E-69 2.4E-73 525.0 28.5 318 38-360 49-369 (369)
5 1qs0_B 2-oxoisovalerate dehydr 100.0 1.9E-67 6.6E-72 510.2 29.3 317 38-359 3-337 (338)
6 2ozl_B PDHE1-B, pyruvate dehyd 100.0 3.3E-67 1.1E-71 508.5 30.1 321 37-359 12-340 (341)
7 3mos_A Transketolase, TK; thia 100.0 3.9E-59 1.3E-63 483.2 27.2 297 37-355 310-615 (616)
8 2o1x_A 1-deoxy-D-xylulose-5-ph 100.0 3.2E-57 1.1E-61 471.0 29.0 296 39-359 321-623 (629)
9 2o1s_A 1-deoxy-D-xylulose-5-ph 100.0 6.8E-57 2.3E-61 468.1 30.7 297 38-359 317-620 (621)
10 3m49_A Transketolase; alpha-be 100.0 2.3E-54 7.7E-59 450.8 19.2 299 36-358 375-690 (690)
11 3rim_A Transketolase, TK; TPP, 100.0 3.5E-54 1.2E-58 449.2 20.2 298 38-359 373-699 (700)
12 3uk1_A Transketolase; structur 100.0 4.1E-54 1.4E-58 449.8 19.6 293 37-358 392-710 (711)
13 3l84_A Transketolase; TKT, str 100.0 5.4E-54 1.8E-58 444.5 18.0 285 37-356 335-631 (632)
14 1gpu_A Transketolase; transfer 100.0 3.1E-53 1.1E-57 443.8 19.1 297 36-360 352-666 (680)
15 3kom_A Transketolase; rossmann 100.0 5.8E-53 2E-57 439.2 18.8 294 37-358 352-663 (663)
16 2r8o_A Transketolase 1, TK 1; 100.0 1.2E-52 4E-57 438.9 19.0 299 36-359 351-664 (669)
17 1itz_A Transketolase; calvin c 100.0 1.7E-51 5.8E-56 430.3 23.9 292 36-357 362-675 (675)
18 2jgd_A 2-oxoglutarate dehydrog 100.0 1.5E-51 5.2E-56 439.6 22.2 341 4-356 553-931 (933)
19 1r9j_A Transketolase; domains, 100.0 8.2E-52 2.8E-56 432.4 16.3 290 37-359 349-656 (673)
20 2e6k_A Transketolase; structur 100.0 2.8E-51 9.6E-56 427.3 19.5 289 37-358 346-651 (651)
21 2yic_A 2-oxoglutarate decarbox 100.0 1.5E-49 5E-54 422.2 19.1 322 4-337 480-848 (868)
22 2xt6_A 2-oxoglutarate decarbox 100.0 4.3E-49 1.5E-53 427.9 19.5 322 4-337 725-1093(1113)
23 2qtc_A Pyruvate dehydrogenase 100.0 2.6E-44 9E-49 382.7 21.3 298 37-359 489-857 (886)
24 3ahc_A Phosphoketolase, xylulo 100.0 4.8E-42 1.6E-46 359.8 17.5 305 40-358 429-785 (845)
25 1yd7_A 2-keto acid:ferredoxin 99.9 1.7E-28 5.8E-33 241.7 8.2 284 40-359 23-395 (395)
26 2c42_A Pyruvate-ferredoxin oxi 99.8 1.1E-17 3.6E-22 184.3 23.2 257 82-358 50-382 (1231)
27 3ju3_A Probable 2-oxoacid ferr 99.7 4E-17 1.4E-21 134.0 9.6 106 237-359 12-117 (118)
28 3eya_A Pyruvate dehydrogenase 94.6 0.18 6.2E-06 50.8 11.0 157 40-214 3-165 (549)
29 2uz1_A Benzaldehyde lyase; thi 94.1 0.42 1.5E-05 48.2 12.6 154 39-211 3-164 (563)
30 1v5e_A Pyruvate oxidase; oxido 94.1 0.15 5E-06 52.1 9.1 153 40-214 4-167 (590)
31 2pan_A Glyoxylate carboligase; 93.3 0.22 7.4E-06 51.0 8.7 155 40-212 27-189 (616)
32 2nxw_A Phenyl-3-pyruvate decar 92.9 1.6 5.5E-05 44.0 14.4 162 36-215 17-190 (565)
33 1q6z_A BFD, BFDC, benzoylforma 92.9 0.4 1.4E-05 48.0 9.8 117 86-213 39-163 (528)
34 2iht_A Carboxyethylarginine sy 92.4 0.57 1.9E-05 47.4 10.3 153 40-213 12-173 (573)
35 1ozh_A ALS, acetolactate synth 92.0 0.44 1.5E-05 48.2 8.9 155 40-213 11-172 (566)
36 2vbi_A Pyruvate decarboxylase; 91.8 2.1 7.3E-05 43.0 13.7 155 40-213 3-171 (566)
37 1ybh_A Acetolactate synthase, 91.8 0.42 1.4E-05 48.6 8.4 156 40-213 12-174 (590)
38 4feg_A Pyruvate oxidase; carba 91.1 1.9 6.4E-05 43.9 12.5 160 38-214 9-174 (603)
39 3hww_A 2-succinyl-5-enolpyruvy 90.7 2.5 8.5E-05 42.5 12.8 115 87-211 48-171 (556)
40 2pgn_A Cyclohexane-1,2-dione h 90.5 0.66 2.3E-05 47.1 8.5 156 40-213 4-167 (589)
41 1t9b_A Acetolactate synthase, 90.5 0.93 3.2E-05 47.0 9.7 152 40-212 82-243 (677)
42 2wvg_A PDC, pyruvate decarboxy 90.1 1.4 4.8E-05 44.4 10.4 155 40-213 3-171 (568)
43 2x7j_A 2-succinyl-5-enolpyruvy 89.9 2.1 7.1E-05 43.5 11.6 117 86-212 70-199 (604)
44 2c31_A Oxalyl-COA decarboxylas 89.9 0.46 1.6E-05 48.0 6.6 157 38-213 8-173 (568)
45 2q28_A Oxalyl-COA decarboxylas 89.4 0.54 1.8E-05 47.4 6.7 155 40-213 8-171 (564)
46 1t9b_A Acetolactate synthase, 87.8 1 3.5E-05 46.6 7.6 151 43-206 463-631 (677)
47 2vk8_A Pyruvate decarboxylase 86.2 2.9 0.0001 41.9 9.8 116 87-214 44-173 (563)
48 3lq1_A 2-succinyl-5-enolpyruvy 86.2 5.2 0.00018 40.3 11.7 116 86-211 50-178 (578)
49 2lqo_A Putative glutaredoxin R 75.4 5.5 0.00019 29.9 5.6 73 239-316 4-82 (92)
50 2vbf_A Branched-chain alpha-ke 74.9 4.4 0.00015 40.7 6.4 154 40-213 25-192 (570)
51 3eya_A Pyruvate dehydrogenase 70.7 9.9 0.00034 37.9 7.9 111 85-206 396-523 (549)
52 4feg_A Pyruvate oxidase; carba 69.7 6.1 0.00021 40.0 6.1 112 85-206 410-540 (603)
53 1ovm_A Indole-3-pyruvate decar 68.0 11 0.00037 37.5 7.5 157 40-213 5-172 (552)
54 3fni_A Putative diflavin flavo 67.9 10 0.00035 31.2 6.1 49 246-296 15-63 (159)
55 3rpe_A MDAB, modulator of drug 66.8 27 0.00092 30.6 8.9 61 251-314 47-107 (218)
56 3kkj_A Amine oxidase, flavin-c 66.7 4.5 0.00015 34.2 3.8 31 239-272 3-33 (336)
57 2uz1_A Benzaldehyde lyase; thi 65.2 16 0.00054 36.5 8.0 110 85-206 409-540 (563)
58 2vzf_A NADH-dependent FMN redu 65.2 15 0.00053 31.0 7.0 67 247-314 16-93 (197)
59 2c31_A Oxalyl-COA decarboxylas 64.8 13 0.00044 37.2 7.3 110 85-206 416-541 (568)
60 5nul_A Flavodoxin; electron tr 63.0 11 0.00037 29.7 5.2 31 246-276 9-39 (138)
61 1aba_A Glutaredoxin; electron 62.9 13 0.00044 26.8 5.2 59 250-308 14-82 (87)
62 3gx1_A LIN1832 protein; APC633 62.7 56 0.0019 25.9 10.2 109 240-359 6-124 (130)
63 1ozh_A ALS, acetolactate synth 62.7 12 0.0004 37.6 6.5 111 85-206 410-537 (566)
64 4dik_A Flavoprotein; TM0755, e 62.6 20 0.00069 34.5 7.9 73 242-315 268-344 (410)
65 3hly_A Flavodoxin-like domain; 62.6 15 0.00052 30.1 6.2 49 246-297 11-59 (161)
66 1sqs_A Conserved hypothetical 61.5 21 0.00073 31.2 7.4 68 247-315 15-104 (242)
67 3ipz_A Monothiol glutaredoxin- 60.9 10 0.00036 29.0 4.6 70 238-309 17-91 (109)
68 2q62_A ARSH; alpha/beta, flavo 60.2 20 0.00067 32.0 6.9 75 239-314 35-122 (247)
69 3hww_A 2-succinyl-5-enolpyruvy 59.8 13 0.00045 37.1 6.3 29 178-206 505-533 (556)
70 1rw1_A Conserved hypothetical 58.5 14 0.00047 28.6 4.9 49 241-291 2-50 (114)
71 2a5l_A Trp repressor binding p 57.0 22 0.00076 29.6 6.5 68 246-315 16-96 (200)
72 3lyu_A Putative hydrogenase; t 57.0 14 0.00048 29.8 4.9 47 229-275 9-55 (142)
73 1v5e_A Pyruvate oxidase; oxido 55.8 21 0.00072 35.9 7.0 111 85-206 403-533 (590)
74 3fz4_A Putative arsenate reduc 54.6 18 0.00061 28.4 5.0 42 249-291 12-53 (120)
75 2kok_A Arsenate reductase; bru 54.3 19 0.00067 28.0 5.2 50 240-291 6-55 (120)
76 3lfh_A Manxa, phosphotransfera 53.8 86 0.0029 25.3 11.0 108 240-356 5-120 (144)
77 2wci_A Glutaredoxin-4; redox-a 53.3 16 0.00055 29.4 4.6 67 239-307 35-106 (135)
78 3okp_A GDP-mannose-dependent a 52.9 1.2E+02 0.0042 27.2 11.5 77 274-359 257-343 (394)
79 3m49_A Transketolase; alpha-be 52.6 33 0.0011 35.5 7.9 75 124-208 188-269 (690)
80 3f2v_A General stress protein 52.2 40 0.0014 28.7 7.3 62 253-315 19-83 (192)
81 2fz5_A Flavodoxin; alpha/beta 51.9 22 0.00075 27.6 5.2 60 247-314 11-72 (137)
82 1q6z_A BFD, BFDC, benzoylforma 51.9 24 0.00084 34.8 6.7 112 85-206 392-519 (528)
83 2amj_A Modulator of drug activ 51.6 39 0.0013 28.8 7.2 60 252-314 35-94 (204)
84 3f6r_A Flavodoxin; FMN binding 51.4 24 0.00084 27.9 5.5 63 246-315 12-77 (148)
85 2fzv_A Putative arsenical resi 51.4 29 0.00099 31.6 6.6 75 239-314 59-147 (279)
86 2pan_A Glyoxylate carboligase; 51.4 17 0.00057 36.8 5.5 111 85-206 432-574 (616)
87 1wik_A Thioredoxin-like protei 51.0 22 0.00074 26.9 4.9 68 238-307 14-86 (109)
88 3l78_A Regulatory protein SPX; 51.0 26 0.0009 27.3 5.5 41 249-290 9-49 (120)
89 3gdw_A Sigma-54 interaction do 50.8 95 0.0032 24.9 10.2 105 240-355 6-122 (139)
90 3zyw_A Glutaredoxin-3; metal b 50.7 19 0.00066 27.6 4.6 65 238-307 15-87 (111)
91 3rdw_A Putative arsenate reduc 50.2 20 0.00068 28.2 4.6 49 241-291 7-55 (121)
92 1t0i_A YLR011WP; FMN binding p 50.1 36 0.0012 28.2 6.7 67 247-314 14-108 (191)
93 2iht_A Carboxyethylarginine sy 49.7 14 0.00048 37.0 4.5 110 85-206 426-555 (573)
94 3lq1_A 2-succinyl-5-enolpyruvy 48.3 20 0.00067 36.0 5.4 29 178-206 526-554 (578)
95 2x7j_A 2-succinyl-5-enolpyruvy 48.0 9.9 0.00034 38.5 3.1 99 97-206 459-574 (604)
96 3gkx_A Putative ARSC family re 47.7 22 0.00076 27.8 4.6 49 241-291 6-54 (120)
97 1ovm_A Indole-3-pyruvate decar 47.4 52 0.0018 32.5 8.3 112 85-206 398-526 (552)
98 3q2o_A Phosphoribosylaminoimid 46.9 61 0.0021 30.3 8.4 74 236-317 12-98 (389)
99 1rtt_A Conserved hypothetical 46.5 19 0.00063 30.2 4.2 64 250-315 23-97 (193)
100 3f0i_A Arsenate reductase; str 46.0 16 0.00055 28.6 3.4 42 249-291 13-54 (119)
101 2q28_A Oxalyl-COA decarboxylas 45.7 35 0.0012 33.9 6.7 111 85-206 411-538 (564)
102 3jx9_A Putative phosphoheptose 45.7 35 0.0012 28.7 5.7 83 187-270 24-110 (170)
103 1f4p_A Flavodoxin; electron tr 44.8 30 0.001 27.3 5.0 44 247-297 12-56 (147)
104 3hr4_A Nitric oxide synthase, 43.9 93 0.0032 27.1 8.4 53 239-298 40-95 (219)
105 3lrx_A Putative hydrogenase; a 43.9 28 0.00094 28.4 4.8 39 237-275 22-60 (158)
106 3hh1_A Tetrapyrrole methylase 43.4 11 0.00037 29.4 2.0 35 236-270 77-114 (117)
107 3u7r_A NADPH-dependent FMN red 43.2 55 0.0019 27.7 6.7 62 250-312 18-89 (190)
108 3l4e_A Uncharacterized peptida 43.1 36 0.0012 29.4 5.5 55 238-295 27-85 (206)
109 4bby_A Alkyldihydroxyacetoneph 42.8 1E+02 0.0035 31.4 9.8 93 165-265 189-296 (658)
110 2bfw_A GLGA glycogen synthase; 42.3 70 0.0024 26.0 7.2 78 271-359 96-179 (200)
111 1ydg_A Trp repressor binding p 42.1 35 0.0012 28.8 5.4 69 246-315 17-103 (211)
112 2ab1_A Hypothetical protein; H 42.1 7.1 0.00024 31.1 0.7 39 235-273 58-98 (122)
113 2ark_A Flavodoxin; FMN, struct 41.8 49 0.0017 27.4 6.2 30 246-275 15-45 (188)
114 3llv_A Exopolyphosphatase-rela 41.5 69 0.0023 24.8 6.7 32 238-272 6-37 (141)
115 1pdo_A Mannose permease; phosp 41.4 1.3E+02 0.0044 23.7 10.4 109 240-356 3-119 (135)
116 3uk1_A Transketolase; structur 41.4 44 0.0015 34.6 6.8 87 111-208 188-283 (711)
117 2e85_A Hydrogenase 3 maturatio 40.5 71 0.0024 26.2 6.8 57 240-298 5-66 (159)
118 3aw8_A PURK, phosphoribosylami 39.8 19 0.00064 33.6 3.4 51 241-294 2-64 (369)
119 1w85_A Pyruvate dehydrogenase 39.6 2.1E+02 0.007 26.8 10.8 37 169-206 221-261 (368)
120 1z3e_A Regulatory protein SPX; 39.4 59 0.002 25.6 6.0 48 241-290 3-50 (132)
121 1t5b_A Acyl carrier protein ph 39.0 1E+02 0.0035 25.3 7.8 68 247-315 16-111 (201)
122 2vbf_A Branched-chain alpha-ke 38.9 68 0.0023 31.8 7.7 100 97-206 429-545 (570)
123 1ybh_A Acetolactate synthase, 38.1 58 0.002 32.5 7.0 111 85-206 416-552 (590)
124 1cfz_A Hydrogenase 2 maturatio 37.1 62 0.0021 26.6 5.9 55 240-298 2-63 (162)
125 2wem_A Glutaredoxin-related pr 37.0 70 0.0024 24.8 5.9 66 238-308 19-93 (118)
126 1s3c_A Arsenate reductase; ARS 36.3 36 0.0012 27.5 4.2 48 241-290 4-51 (141)
127 1r9j_A Transketolase; domains, 36.2 1E+02 0.0036 31.5 8.6 75 124-208 164-246 (673)
128 3pl5_A SMU_165, putative uncha 35.8 1.2E+02 0.0041 28.0 8.3 70 40-110 98-177 (320)
129 2vbi_A Pyruvate decarboxylase; 35.4 32 0.0011 34.2 4.6 110 85-206 399-527 (566)
130 2ohh_A Type A flavoprotein FPR 35.0 63 0.0021 30.1 6.3 63 247-313 268-330 (404)
131 3oz2_A Digeranylgeranylglycero 34.5 28 0.00095 31.8 3.7 30 240-272 6-35 (397)
132 4hs4_A Chromate reductase; tri 34.4 65 0.0022 27.3 5.8 61 251-313 24-96 (199)
133 3noy_A 4-hydroxy-3-methylbut-2 34.3 92 0.0031 29.4 7.1 108 237-359 58-170 (366)
134 1t1v_A SH3BGRL3, SH3 domain-bi 34.1 87 0.003 22.5 5.8 53 254-308 22-77 (93)
135 2wvg_A PDC, pyruvate decarboxy 33.9 46 0.0016 33.1 5.4 98 97-206 417-535 (568)
136 1ykg_A SIR-FP, sulfite reducta 33.9 52 0.0018 26.8 5.0 30 247-276 21-50 (167)
137 3nyi_A FAT acid-binding protei 33.9 1.1E+02 0.0038 27.8 7.6 70 40-110 67-146 (297)
138 3l84_A Transketolase; TKT, str 33.9 76 0.0026 32.3 7.0 99 98-208 119-238 (632)
139 3tem_A Ribosyldihydronicotinam 33.8 78 0.0027 27.5 6.4 66 249-315 17-117 (228)
140 3qmx_A Glutaredoxin A, glutare 33.8 57 0.0019 24.2 4.7 68 238-308 15-84 (99)
141 3fwz_A Inner membrane protein 33.8 45 0.0015 26.2 4.4 32 239-273 8-39 (140)
142 1ycg_A Nitric oxide reductase; 33.6 64 0.0022 30.0 6.1 54 241-297 253-310 (398)
143 3mos_A Transketolase, TK; thia 33.5 1.5E+02 0.0052 29.9 9.2 96 98-207 126-237 (616)
144 2q9u_A A-type flavoprotein; fl 33.4 1.2E+02 0.0042 28.2 8.2 65 247-315 268-332 (414)
145 2bfd_A 2-oxoisovalerate dehydr 33.3 1E+02 0.0035 29.3 7.6 32 175-207 247-282 (400)
146 3kom_A Transketolase; rossmann 33.1 1.1E+02 0.0037 31.4 8.1 100 98-208 121-245 (663)
147 3fvw_A Putative NAD(P)H-depend 32.7 91 0.0031 26.0 6.4 64 250-315 19-92 (192)
148 1e5d_A Rubredoxin\:oxygen oxid 32.4 1.3E+02 0.0044 27.8 8.1 70 242-315 255-328 (402)
149 2hpv_A FMN-dependent NADH-azor 32.3 1.2E+02 0.004 25.3 7.2 68 247-315 17-119 (208)
150 3orq_A N5-carboxyaminoimidazol 32.1 82 0.0028 29.4 6.6 59 236-298 10-81 (377)
151 2zki_A 199AA long hypothetical 31.6 80 0.0027 26.1 5.9 68 246-315 14-95 (199)
152 2ywl_A Thioredoxin reductase r 31.5 43 0.0015 27.1 4.0 31 240-273 3-33 (180)
153 3h8q_A Thioredoxin reductase 3 30.8 1.6E+02 0.0054 22.1 7.0 67 238-308 16-87 (114)
154 2bmv_A Flavodoxin; electron tr 30.7 34 0.0012 27.7 3.2 32 242-274 4-36 (164)
155 2pgn_A Cyclohexane-1,2-dione h 30.2 18 0.00062 36.4 1.7 111 85-206 414-541 (589)
156 4a5l_A Thioredoxin reductase; 30.0 84 0.0029 27.7 6.1 44 237-283 151-194 (314)
157 3rim_A Transketolase, TK; TPP, 29.9 98 0.0034 31.9 7.1 76 124-209 184-266 (700)
158 3pu6_A Uncharacterized protein 29.6 91 0.0031 25.5 5.7 55 240-298 4-64 (157)
159 4gcm_A TRXR, thioredoxin reduc 29.6 44 0.0015 29.8 4.0 31 239-272 7-37 (312)
160 3gx8_A Monothiol glutaredoxin- 29.4 50 0.0017 25.7 3.8 66 238-309 15-92 (121)
161 4gi5_A Quinone reductase; prot 29.3 74 0.0025 28.8 5.5 65 250-315 39-137 (280)
162 1id1_A Putative potassium chan 28.8 59 0.002 25.8 4.4 33 238-273 3-35 (153)
163 3nzn_A Glutaredoxin; structura 28.7 90 0.0031 22.9 5.1 68 239-307 22-94 (103)
164 2nxw_A Phenyl-3-pyruvate decar 28.5 80 0.0027 31.3 6.1 146 43-206 376-536 (565)
165 2fi9_A Outer membrane protein; 28.3 17 0.00059 29.0 0.9 36 238-273 68-104 (128)
166 2fvt_A Conserved hypothetical 28.0 17 0.00059 29.4 0.9 36 238-273 67-103 (135)
167 3b6i_A Flavoprotein WRBA; flav 28.0 78 0.0027 26.0 5.2 30 246-275 12-42 (198)
168 2gm2_A Conserved hypothetical 27.8 17 0.00056 29.4 0.7 39 235-273 61-100 (132)
169 1gpu_A Transketolase; transfer 27.5 1.1E+02 0.0036 31.5 6.9 85 112-207 150-245 (680)
170 2o1x_A 1-deoxy-D-xylulose-5-ph 27.4 1.9E+02 0.0067 29.1 8.9 25 183-207 260-284 (629)
171 3bed_A PTS system, IIA compone 27.3 2.3E+02 0.0079 22.4 10.4 109 240-356 7-120 (142)
172 2x5n_A SPRPN10, 26S proteasome 27.0 1.1E+02 0.0038 25.7 5.9 58 241-300 109-174 (192)
173 2yan_A Glutaredoxin-3; oxidore 26.9 85 0.0029 23.1 4.7 68 239-308 17-89 (105)
174 3qhp_A Type 1 capsular polysac 26.9 2.2E+02 0.0075 22.0 10.3 101 240-359 34-139 (166)
175 1d1q_A Tyrosine phosphatase (E 26.6 36 0.0012 28.0 2.7 36 256-299 62-97 (161)
176 1itz_A Transketolase; calvin c 26.6 1.4E+02 0.0049 30.4 7.7 37 171-208 216-257 (675)
177 2iuy_A Avigt4, glycosyltransfe 26.5 3.3E+02 0.011 23.9 9.8 102 238-358 188-306 (342)
178 2e6k_A Transketolase; structur 26.4 1.3E+02 0.0044 30.6 7.3 86 111-207 151-245 (651)
179 2ct6_A SH3 domain-binding glut 26.2 1.2E+02 0.0041 22.8 5.5 62 240-307 9-88 (111)
180 3ic4_A Glutaredoxin (GRX-1); s 26.0 86 0.0029 22.1 4.5 37 240-277 13-49 (92)
181 1y7p_A Hypothetical protein AF 25.7 1.5E+02 0.0052 25.9 6.5 85 238-328 87-177 (223)
182 2vdc_G Glutamate synthase [NAD 25.7 49 0.0017 32.0 3.8 34 237-273 121-154 (456)
183 3mtq_A Putative phosphoenolpyr 25.6 2.8E+02 0.0094 22.7 11.9 109 239-356 22-136 (159)
184 3od1_A ATP phosphoribosyltrans 25.6 1.5E+02 0.0052 28.1 7.3 56 240-301 338-394 (400)
185 3ipr_A PTS system, IIA compone 25.5 2.6E+02 0.0089 22.4 10.8 114 240-356 3-124 (150)
186 4dgk_A Phytoene dehydrogenase; 25.5 48 0.0016 31.8 3.7 31 239-272 2-32 (501)
187 3rhb_A ATGRXC5, glutaredoxin-C 25.4 1.3E+02 0.0043 22.3 5.5 68 239-309 19-91 (113)
188 3k5i_A Phosphoribosyl-aminoimi 25.2 1.5E+02 0.0053 27.8 7.3 57 237-298 23-94 (403)
189 2r8o_A Transketolase 1, TK 1; 25.1 1.5E+02 0.005 30.3 7.5 85 112-207 148-242 (669)
190 3fbs_A Oxidoreductase; structu 25.1 60 0.002 28.2 4.0 31 239-272 3-33 (297)
191 3fst_A 5,10-methylenetetrahydr 25.1 3.2E+02 0.011 24.8 9.1 72 36-130 31-103 (304)
192 3nnk_A Ureidoglycine-glyoxylat 25.0 1.8E+02 0.006 26.5 7.6 18 281-298 158-175 (411)
193 4a5l_A Thioredoxin reductase; 24.7 51 0.0017 29.2 3.5 31 239-272 5-35 (314)
194 3svl_A Protein YIEF; E. coli C 24.7 70 0.0024 26.9 4.2 62 251-313 21-95 (193)
195 3r6w_A FMN-dependent NADH-azor 24.7 2.4E+02 0.0081 23.5 7.8 66 249-315 18-112 (212)
196 2g1u_A Hypothetical protein TM 24.6 70 0.0024 25.4 4.1 33 237-272 18-50 (155)
197 1ijb_A VON willebrand factor; 24.5 90 0.0031 26.0 5.0 57 241-299 119-181 (202)
198 2cul_A Glucose-inhibited divis 24.5 66 0.0023 27.5 4.1 32 239-273 4-35 (232)
199 1y1l_A Arsenate reductase (ARS 24.4 83 0.0028 24.5 4.3 80 256-359 44-123 (124)
200 3iab_B Ribonucleases P/MRP pro 24.4 1E+02 0.0035 25.0 4.8 31 238-268 60-91 (140)
201 1xhc_A NADH oxidase /nitrite r 24.3 44 0.0015 31.1 3.1 36 236-275 6-41 (367)
202 3mcu_A Dipicolinate synthase, 24.1 36 0.0012 29.5 2.3 33 238-270 5-39 (207)
203 3itj_A Thioredoxin reductase 1 24.1 53 0.0018 29.3 3.5 32 238-272 22-53 (338)
204 2o1s_A 1-deoxy-D-xylulose-5-ph 24.0 3E+02 0.01 27.6 9.5 25 183-207 255-279 (621)
205 4e4t_A Phosphoribosylaminoimid 24.0 1.3E+02 0.0045 28.5 6.5 59 236-298 33-104 (419)
206 3le1_A Phosphotransferase syst 23.9 85 0.0029 23.0 4.0 31 235-265 55-85 (88)
207 3f8d_A Thioredoxin reductase ( 23.6 65 0.0022 28.3 4.0 32 239-273 16-47 (323)
208 3cpk_A Uncharacterized protein 23.3 27 0.00091 28.9 1.2 36 238-273 88-124 (150)
209 3k7m_X 6-hydroxy-L-nicotine ox 22.9 58 0.002 30.5 3.7 30 240-272 3-32 (431)
210 2aef_A Calcium-gated potassium 22.8 62 0.0021 27.7 3.6 56 237-296 8-78 (234)
211 3g8r_A Probable spore coat pol 22.6 4.7E+02 0.016 24.4 12.2 62 242-304 138-206 (350)
212 2ch1_A 3-hydroxykynurenine tra 22.6 2.1E+02 0.0071 25.9 7.5 19 281-299 163-181 (396)
213 2c42_A Pyruvate-ferredoxin oxi 22.4 5.1E+02 0.017 28.5 11.4 32 175-206 1032-1064(1231)
214 3kgw_A Alanine-glyoxylate amin 22.4 1.9E+02 0.0066 25.9 7.2 25 264-288 121-145 (393)
215 1edz_A 5,10-methylenetetrahydr 22.3 1.1E+02 0.0036 28.4 5.2 57 237-295 176-251 (320)
216 3fys_A Protein DEGV; fatty aci 22.3 1.9E+02 0.0065 26.5 7.0 69 41-110 98-172 (315)
217 1yvv_A Amine oxidase, flavin-c 22.1 70 0.0024 28.5 3.9 32 239-273 3-34 (336)
218 3dme_A Conserved exported prot 22.0 64 0.0022 29.1 3.7 32 239-273 5-36 (369)
219 3fg2_P Putative rubredoxin red 22.0 78 0.0027 29.6 4.4 37 238-277 1-39 (404)
220 1nh9_A MJA10B, DNA-binding pro 21.9 2E+02 0.007 21.0 5.8 41 236-276 24-67 (87)
221 3dfz_A SIRC, precorrin-2 dehyd 21.5 78 0.0027 27.6 4.0 34 237-273 30-63 (223)
222 1ryi_A Glycine oxidase; flavop 21.3 67 0.0023 29.4 3.7 33 239-274 18-50 (382)
223 1u6t_A SH3 domain-binding glut 21.1 1.8E+02 0.0061 22.8 5.6 54 252-310 18-83 (121)
224 1v95_A Nuclear receptor coacti 21.0 2.6E+02 0.0089 22.2 6.6 59 239-298 9-69 (130)
225 3rh0_A Arsenate reductase; oxi 20.9 2.2E+02 0.0077 22.9 6.4 81 256-359 66-147 (148)
226 1d4a_A DT-diaphorase, quinone 20.9 1.9E+02 0.0064 25.6 6.6 66 249-315 18-118 (273)
227 3lcm_A SMU.1420, putative oxid 20.6 1.7E+02 0.006 24.3 6.0 64 250-315 17-98 (196)
228 3c85_A Putative glutathione-re 20.5 96 0.0033 25.2 4.2 32 238-272 39-71 (183)
229 4a9w_A Monooxygenase; baeyer-v 20.5 72 0.0025 28.5 3.7 32 239-273 4-35 (357)
230 2gqw_A Ferredoxin reductase; f 20.5 1.3E+02 0.0045 28.1 5.7 50 237-289 144-199 (408)
231 2oln_A NIKD protein; flavoprot 20.4 79 0.0027 29.2 4.0 33 239-274 5-37 (397)
232 4fk1_A Putative thioredoxin re 20.4 83 0.0028 27.9 4.0 31 239-272 7-37 (304)
233 3tnl_A Shikimate dehydrogenase 20.4 1.3E+02 0.0043 27.7 5.3 34 237-273 153-187 (315)
234 1xhc_A NADH oxidase /nitrite r 20.4 1.2E+02 0.0041 28.0 5.3 50 237-289 142-195 (367)
235 1vl0_A DTDP-4-dehydrorhamnose 20.3 1.4E+02 0.0049 25.9 5.6 49 240-288 12-60 (292)
236 3ged_A Short-chain dehydrogena 20.3 1.9E+02 0.0065 25.4 6.3 51 241-298 4-54 (247)
237 3lzw_A Ferredoxin--NADP reduct 20.2 74 0.0025 28.1 3.7 32 239-273 8-39 (332)
No 1
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=100.00 E-value=1.1e-70 Score=529.89 Aligned_cols=320 Identities=45% Similarity=0.764 Sum_probs=294.6
Q ss_pred cccHHHHHHHHHHHHHhcCCCEEEEcCCCC-CCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcCCCeeEEEec
Q 018167 39 SLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQ 117 (360)
Q Consensus 39 ~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~-~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~G~~p~~~~~ 117 (360)
+++||++|+++|.+++++||+|+++++|++ +++.|+.+++|+++|||+||+|+||+|++|+++|+|+|++|+|||+++|
T Consensus 2 ~~~~~~a~~~~L~~l~~~~~~vv~~~~d~~~~~g~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~a~G~A~~G~rp~~~~t 81 (324)
T 1w85_B 2 QMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQ 81 (324)
T ss_dssp EECHHHHHHHHHHHHHHHCTTEEEEETTCSTTCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHTTCEEEEBCS
T ss_pred cchHHHHHHHHHHHHHhHCcCEEEEcCcccccCCcchhHHHHHHHhCCCcEEEcchhHHHHHHHHHHHHhCCCEEEEEec
Confidence 368999999999999999999999999998 4666777899999999999999999999999999999999999999867
Q ss_pred CcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCCCchHHHHHcCCCCcEEEeeCCHHHHHHHHHHh
Q 018167 118 FADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSC 197 (360)
Q Consensus 118 f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~a 197 (360)
|++|++|++|||++++|+++|+++++.++ ++|++.+.|..+.||+||+++|+++||++|||+|++|+|++|++.++++|
T Consensus 82 ~~~F~~~a~dqi~~~~a~~~~~~~g~~~~-pvv~~~~~g~~~~~g~~hs~~~~a~~~~iP~l~V~~Psd~~e~~~~l~~a 160 (324)
T 1w85_B 82 FFGFVYEVMDSICGQMARIRYRTGGRYHM-PITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISA 160 (324)
T ss_dssp SGGGGGGTHHHHHTTGGGHHHHTTTSSCC-CCEEEEEECSSSCCCTTSSCCCHHHHTTSTTCEEECCSSHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHhhhccCCCcC-CEEEEEeccCCCCCCCcccccHHHHHccCCCCEEEeeCCHHHHHHHHHHH
Confidence 99999999999999999999998877788 88877766667788999999999999999999999999999999999999
Q ss_pred HhCCCCEEEeccccccccCcccCCCCCcccCCCceEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccC
Q 018167 198 IRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIP 277 (360)
Q Consensus 198 ~~~~~P~~i~~~k~l~r~~~~~v~~~~~~~~~Gk~~vl~~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP 277 (360)
+++++|++||+||+++|...+.++++++.+++||++++++|+|++|||+|++++.|++|++.|+++|++++|||+++++|
T Consensus 161 ~~~~~Pv~i~~p~~l~r~~~~~~~~~~~~~~~Gk~~~~~~g~dv~iva~G~~~~~a~~Aa~~L~~~Gi~v~vi~~~~l~P 240 (324)
T 1w85_B 161 IRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQP 240 (324)
T ss_dssp HHSSSCEEEEEETTTSSSCCEECCSSCCCCCTTCCEEEECCSSEEEEECTTHHHHHHHHHHHHHHTTCCEEEEECSEEES
T ss_pred HHcCCCEEEEechHhcCCCCCCCCCccccccCCceEEEecCCCEEEEEecHHHHHHHHHHHHHHhcCCCEEEEEeeeecC
Confidence 99999999999999998766667666677899999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCCCcc--ccccccCCCCHHHHHHHHH
Q 018167 278 WDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFP--LVFEPFYMPTKNKILDAIK 355 (360)
Q Consensus 278 ~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~~~~--~~~e~~gl~~~~~I~~~i~ 355 (360)
||++.|.+++++++++||+|||...||||++|++++.++++..+..|+.+++..|.+.+ .+++++|+ |+++|+++|+
T Consensus 241 ~d~~~i~~~~~~~~~vvvvEe~~~~Gg~g~~v~~~l~~~~~~~l~~~v~~vg~~d~~~~~~~l~~~~gl-~~~~I~~~i~ 319 (324)
T 1w85_B 241 LDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVWLP-NFKDVIETAK 319 (324)
T ss_dssp CCHHHHHHHHHHHSCEEEEEEEETTSSSHHHHHHHHHHHHGGGCSSCCEEEEECSSSSCCGGGHHHHSC-CHHHHHHHHH
T ss_pred CCHHHHHHHHhhCCcEEEEeCCCcCChHHHHHHHHHHhhCccccCCCeEEEecCCcCCCcHHHHHHhCc-CHHHHHHHHH
Confidence 99999999999999999999998899999999999998876566789999977676532 37888998 9999999999
Q ss_pred HhhhC
Q 018167 356 STVNY 360 (360)
Q Consensus 356 ~~l~~ 360 (360)
++++|
T Consensus 320 ~~l~~ 324 (324)
T 1w85_B 320 KVMNF 324 (324)
T ss_dssp HHHTC
T ss_pred HHhhC
Confidence 99987
No 2
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=100.00 E-value=3.3e-70 Score=526.74 Aligned_cols=321 Identities=50% Similarity=0.826 Sum_probs=294.3
Q ss_pred CcccHHHHHHHHHHHHHhcCCCEEEEcCCCC-CCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcCCCeeEEEe
Q 018167 38 KSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEI 116 (360)
Q Consensus 38 ~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~-~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~G~~p~~~~ 116 (360)
++++||++++++|.+++++|++|+++++|++ +++.|+.+.+|+++|||+||+|+||+|++|+++|+|+|++|++||+++
T Consensus 2 ~~~~~~~a~~~~l~~l~~~~~~vv~~~~D~~~~~g~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~a~G~A~~G~~p~~~~ 81 (324)
T 1umd_B 2 ALMTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEI 81 (324)
T ss_dssp CEECHHHHHHHHHHHHHHHCTTEEEEETTCSTTCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCCcHHHHHHHHHHHHHhcCCCEEEECCcccccCCcchhhHHHHHHhCCCcEEECchhHHHHHHHHHHHHHCCCEEEEEe
Confidence 4579999999999999999999999999998 466676788999999999999999999999999999999999999987
Q ss_pred cCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCCCchHHHHHcCCCCcEEEeeCCHHHHHHHHHH
Q 018167 117 QFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLS 196 (360)
Q Consensus 117 ~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~ 196 (360)
||++|++|++|||++++|+++|+++++.++ ++|++.+.|..+.+|+||+++|+++||++|||+|++|+|++|++.++++
T Consensus 82 t~~~F~~~a~dqi~~~~a~~~~~~~g~~~~-pvv~~~~~g~~~~~g~~hs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~ 160 (324)
T 1umd_B 82 QFADYIFPGFDQLVSQVAKLRYRSGGQFTA-PLVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKA 160 (324)
T ss_dssp SSGGGCGGGHHHHHHTTTTHHHHTTTSSCC-CCEEEEEECSSSSCGGGSSCCCHHHHHTSTTCEEEECCSHHHHHHHHHH
T ss_pred ccHhHHHHHHHHHHHHHHHHHhhcCCCCcC-CEEEEEcCCCCCCCCCccchhHHHHHhcCCCCEEEEeCCHHHHHHHHHH
Confidence 799999999999999999988888877777 8887765566677899999999999999999999999999999999999
Q ss_pred hHhCCCCEEEeccccccccCcccCCCCCcccCCCceEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEecccc
Q 018167 197 CIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLI 276 (360)
Q Consensus 197 a~~~~~P~~i~~~k~l~r~~~~~v~~~~~~~~~Gk~~vl~~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ik 276 (360)
|+++++|+|||+||+++|...+.++++++.+++||++++++|.|++|||+|++++.|++|++.|+++|++++|||++|++
T Consensus 161 a~~~~~Pv~i~~p~~l~~~~~~~~~~~~~~~~~Gk~~~~~~g~dv~iva~G~~~~~a~~Aa~~L~~~Gi~v~vi~~~~l~ 240 (324)
T 1umd_B 161 AIRDEDPVVFLEPKRLYRSVKEEVPEEDYTLPIGKAALRREGKDLTLICYGTVMPEVLQAAAELAKAGVSAEVLDLRTLM 240 (324)
T ss_dssp HHHCSSCEEEEEEGGGSSSCCEECCSSCCCCCTTCCEEEECCSSEEEEECGGGHHHHHHHHHHHHHTTCCEEEEECCEEE
T ss_pred HHhcCCCEEEEechHhcCCCCCCcCCCCccccCCcceEEecCCCEEEEEecHHHHHHHHHHHHHHhcCCCEEEEEeceec
Confidence 99999999999999999876667776677789999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCCCccc-cccccCCCCHHHHHHHHH
Q 018167 277 PWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL-VFEPFYMPTKNKILDAIK 355 (360)
Q Consensus 277 P~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~~~~~-~~e~~gl~~~~~I~~~i~ 355 (360)
|||++.|.+++++++++||+|||...||||++|++++.++++..++.|+.+++..|.+.+. +++++|+ |+++|+++++
T Consensus 241 P~d~~~i~~~~~~~~~vv~vEe~~~~gG~g~~v~~~l~~~~~~~l~~~v~~vg~~d~~~~~~l~~~~g~-~~~~I~~~i~ 319 (324)
T 1umd_B 241 PWDYEAVMNSVAKTGRVVLVSDAPRHASFVSEVAATIAEDLLDMLLAPPIRVTGFDTPYPYAQDKLYLP-TVTRILNAAK 319 (324)
T ss_dssp TCCHHHHHHHHHHHSCEEEEEEEESTTCHHHHHHHHHHHHHGGGCSSCCEEEEECSSCCCSTTHHHHSC-CHHHHHHHHH
T ss_pred CCCHHHHHHHHhcCCeEEEEecCCcCCCHHHHHHHHHHHhCccccCCCeEEEeCCCCCCCHHHHHHhCc-CHHHHHHHHH
Confidence 9999999999999999999999998999999999999987765567899999776764332 7888888 9999999999
Q ss_pred HhhhC
Q 018167 356 STVNY 360 (360)
Q Consensus 356 ~~l~~ 360 (360)
++++|
T Consensus 320 ~~l~~ 324 (324)
T 1umd_B 320 RALDY 324 (324)
T ss_dssp HHHHC
T ss_pred HHhhC
Confidence 99987
No 3
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=100.00 E-value=1.1e-69 Score=526.34 Aligned_cols=321 Identities=63% Similarity=1.083 Sum_probs=289.3
Q ss_pred CCCcccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcCCCeeEEE
Q 018167 36 SGKSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAE 115 (360)
Q Consensus 36 ~~~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~G~~p~~~ 115 (360)
++.+.+||++++++|.+++++|++|+++++|++.+|.|+.+.+|+++|||+||+|+||+|++|+++|+|+|++|+|||++
T Consensus 17 ~~~~~~~~~a~~~aL~~l~~~~~~vv~~~~D~~~~gt~~~~~~~~~~~gp~r~~~~gIaE~~~v~~a~G~A~~G~rp~~~ 96 (342)
T 2bfd_B 17 QTQKMNLFQSVTSALDNSLAKDPTAVIFGEDVAFGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAE 96 (342)
T ss_dssp CEEEECHHHHHHHHHHHHHHHCTTCEEEETTTTTTCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred ccCCccHHHHHHHHHHHHHhcCCCEEEEcCccCCCcccchHHHHHHHhCCCeEEEcCcCHHHHHHHHHHHHHCCCeeEEE
Confidence 45678999999999999999999999999999865667778999999999999999999999999999999999999998
Q ss_pred ecCcccHHHHHHHHHHHHHhcccccCCCc---cccceEEEcCCCCCCCCCCCCCchHHHHHcCCCCcEEEeeCCHHHHHH
Q 018167 116 IQFADYIFPAFDQIVNEAAKFRYRSGNQF---NCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKG 192 (360)
Q Consensus 116 ~~f~~F~~ra~dQi~~~~a~~~~~~~~~~---~v~~~v~~~~~g~~g~~g~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~ 192 (360)
+||++|++|++|||++++|+++|+++++. |+ .+++.+ +| .+.|++||+++|+++||++|||+|++|+|++|++.
T Consensus 97 ~tf~~F~~~a~dqi~~~~a~~~~~~~g~~~~~pv-v~~~~~-~g-~~~G~th~~~~d~~~l~~iP~l~V~~Psd~~e~~~ 173 (342)
T 2bfd_B 97 IQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSL-TIRSPW-GC-VGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKG 173 (342)
T ss_dssp CSSGGGCGGGHHHHHTTGGGHHHHTTTSSCCTTE-EEEEEE-SC-CSSCGGGSSCCCHHHHHTSTTCEEECCSSHHHHHH
T ss_pred ecchhHHHHHHHHHHHHHHHHHhhhcCCccCCCE-EEEEec-CC-CCCCcchhhHhHHHHHhcCCCcEEEeeCCHHHHHH
Confidence 68999999999999999999999887776 55 444333 33 34456677899999999999999999999999999
Q ss_pred HHHHhHhCCCCEEEeccccccccCcccCCCCCcccCCCceEEeeeCCcEEEEEechhHHHHHHHHHHHHhc-CCCeeEEE
Q 018167 193 LLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKE-GISCELID 271 (360)
Q Consensus 193 ~l~~a~~~~~P~~i~~~k~l~r~~~~~v~~~~~~~~~Gk~~vl~~G~dv~Iia~G~~~~~al~Aa~~L~~~-Gi~v~Vi~ 271 (360)
++++|+++++|++||+||+++|...+.++.+++.+++|+++++++|.|++|||+|++++.|++|+++|+++ |++++|||
T Consensus 174 ~l~~a~~~~~Pv~i~~p~~l~r~~~~~~~~~~~~~~~G~~~v~~~g~dv~iia~G~~~~~a~~Aa~~L~~~~Gi~v~vi~ 253 (342)
T 2bfd_B 174 LLLSCIEDKNPCIFFEPKILYRAAAEEVPIEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAKEKLGVSCEVID 253 (342)
T ss_dssp HHHHHHHSSSCEEEEEEGGGTTSCCEEEESSCCCCCSSCCEEEECCSSEEEEECTTHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred HHHHHHhcCCcEEEEecchhcCCCCCCCCCcccceeCCceEEeccCCCEEEEEECHHHHHHHHHHHHHHhhcCCCEEEEe
Confidence 99999999999999999999998766776666788999999999999999999999999999999999999 99999999
Q ss_pred eccccCCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCCCcc-ccccccCCCCHHHH
Q 018167 272 LKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFP-LVFEPFYMPTKNKI 350 (360)
Q Consensus 272 ~~~ikP~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~~~~-~~~e~~gl~~~~~I 350 (360)
++|++|||++.|.+++++++++||+|||...||||++|++++.++++..+..|+.+++..+.+.+ .+++++|+ |+++|
T Consensus 254 ~~~l~P~d~~~i~~~~~~~~~vv~vEe~~~~gg~g~~v~~~l~~~~~~~l~~~v~~vg~~d~~~~~~l~~~~gl-~~~~I 332 (342)
T 2bfd_B 254 LRTIIPWDVDTICKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTPFPHIFEPFYIP-DKWKC 332 (342)
T ss_dssp CCEEESCCHHHHHHHHHHHSCEEEEEEEESTTCHHHHHHHHHHHHHGGGCSSCCEEEEECSSCCCSTTHHHHSC-CHHHH
T ss_pred eeecCCCCHHHHHHHHhcCCEEEEEEeCccCCcHHHHHHHHHHhhCccccCCCeEEEecCCCCChHHHHHHHCc-CHHHH
Confidence 99999999999999999999999999998899999999999998776556688999977775443 26888888 99999
Q ss_pred HHHHHHhhhC
Q 018167 351 LDAIKSTVNY 360 (360)
Q Consensus 351 ~~~i~~~l~~ 360 (360)
+++|+++++|
T Consensus 333 ~~~i~~~l~~ 342 (342)
T 2bfd_B 333 YDALRKMINY 342 (342)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHhcC
Confidence 9999999987
No 4
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=100.00 E-value=7e-69 Score=524.97 Aligned_cols=318 Identities=49% Similarity=0.799 Sum_probs=257.4
Q ss_pred CcccHHHHHHHHHHHHHhcCCCEEEEcCCCC-CCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcCCCeeEEEe
Q 018167 38 KSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEI 116 (360)
Q Consensus 38 ~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~-~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~G~~p~~~~ 116 (360)
.+.+||++++++|.+++++|++|+++++|++ +++.|+.+..|+++|||+||||+||+||+|+++|+|+|++|++||+++
T Consensus 49 ~~~~~~~a~~~aL~~l~~~d~~vv~~~~D~~~~~g~~~~~~~~~~~~gp~r~~d~gIaE~~~v~~a~G~A~~G~rpv~~~ 128 (369)
T 1ik6_A 49 MMANMAKAINMALHEEMERDERVVVLGEDVGKKGGVFLVTEGLYERFGPERVIDTPLNEGGILGFAMGMAMAGLKPVAEI 128 (369)
T ss_dssp EEECHHHHHHHHHHHHHHHCTTEEEEEC---------CTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CcccHHHHHHHHHHHHHccCCCEEEECCcccccCCcchhHHHHHHHhCCCcEEECcccHHHHHHHHHHHHHCCCeeEEEe
Confidence 5578999999999999999999999999998 455566688999999999999999999999999999999999999987
Q ss_pred cCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCCCchHHHHHcCCCCcEEEeeCCHHHHHHHHHH
Q 018167 117 QFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLS 196 (360)
Q Consensus 117 ~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~ 196 (360)
||++|++|++|||++++|+++|+++++.++ +++++.+.++...+|+||++.|+++||++|||+|++|+|++|++.++++
T Consensus 129 tf~~Fl~~a~Dqi~~~~a~~~~~~~g~~~~-pvv~~~~~gg~~g~g~~hs~~~~a~l~~iPnl~V~~Psd~~e~~~ll~~ 207 (369)
T 1ik6_A 129 QFVDFIWLGADELLNHIAKLRYRSGGNYKA-PLVVRTPVGSGTRGGLYHSNSPEAIFVHTPGLVVVMPSTPYNAKGLLKA 207 (369)
T ss_dssp CCC----CCHHHHHHHHHHHHC------CC-CCEEEEEECC-----------HHHHHHTCTTCEEECCCSHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhCCCCCC-CEEEEEeCCCCCCCCccccccHHHHHcCCCCcEEEecCCHHHHHHHHHH
Confidence 799999999999999999999998886566 6665554333334889999888999999999999999999999999999
Q ss_pred hHhCCCCEEEeccccccccCcccCCCCCcccCCCceEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEecccc
Q 018167 197 CIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLI 276 (360)
Q Consensus 197 a~~~~~P~~i~~~k~l~r~~~~~v~~~~~~~~~Gk~~vl~~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ik 276 (360)
|+++++|++||+||+++|...+.++++++.+++|+++++++|.|++|||+|+++..|++|+++|+ | +++|||++|++
T Consensus 208 A~~~~~Pv~i~~p~~l~r~~~~~v~~~~~~~~~G~~~v~~~g~dv~Iia~G~~v~~a~~Aa~~L~--G-~v~Vi~~~~l~ 284 (369)
T 1ik6_A 208 AIRGDDPVVFLEPKILYRAPREEVPEGDYVVEIGKARVAREGDDVTLVTYGAVVHKALEAAERVK--A-SVEVVDLQTLN 284 (369)
T ss_dssp HHHSSSCEEEEEEGGGSSCCCEEEECSSCCCCTTCCEEEECCSSEEEEECTTHHHHHHHHHHTSS--S-CEEEEECCEEE
T ss_pred HHhCCCCEEEEEehhhhccCCCCcCCCcccccCCceEEEEcCCCEEEEEeCHHHHHHHHHHHHhC--C-CeEEEeeeecC
Confidence 99999999999999999875556665667789999999999999999999999999999999996 8 99999999999
Q ss_pred CCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCCCcc--ccccccCCCCHHHHHHHH
Q 018167 277 PWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFP--LVFEPFYMPTKNKILDAI 354 (360)
Q Consensus 277 P~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~~~~--~~~e~~gl~~~~~I~~~i 354 (360)
|||++.|++++++++++||+||+...||||++|++++.++++..+..|+.+++..|.+.+ .+++++|+ |+++|+++|
T Consensus 285 P~d~~~i~~~~~~~~~vvvvEe~~~~GG~g~~v~~~l~~~~~~~l~~pv~~vg~~d~~~~~~~l~~~~gl-~~~~I~~~i 363 (369)
T 1ik6_A 285 PLDFDTVLKSVSKTGRLIIAHDSPKTGGLGAEVRALVAEKALDRLTAPVIRLAGPDVPQSPIAADAAYAP-TVERIIKAI 363 (369)
T ss_dssp TTCHHHHHHHHHHHCCEEEEEEEESTTSHHHHHHHHHHHHSGGGCSSCCEEEEECCCC-------------CHHHHHHHH
T ss_pred CCCHHHHHHHHhccCeEEEEecCCcCCcHHHHHHHHHHhhCccccCCCeEEEcCCCcCCCCHHHHHHhCc-CHHHHHHHH
Confidence 999999999999999999999999999999999999998876666789999987776543 37888888 999999999
Q ss_pred HHhhhC
Q 018167 355 KSTVNY 360 (360)
Q Consensus 355 ~~~l~~ 360 (360)
+++++|
T Consensus 364 ~~~l~~ 369 (369)
T 1ik6_A 364 EYVMRY 369 (369)
T ss_dssp HHHHTC
T ss_pred HHHhhC
Confidence 999987
No 5
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=100.00 E-value=1.9e-67 Score=510.19 Aligned_cols=317 Identities=45% Similarity=0.819 Sum_probs=284.7
Q ss_pred CcccHHHHHHHHHHHHHhcCCCEEEEcCCCC-CCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcCCCeeEEEe
Q 018167 38 KSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEI 116 (360)
Q Consensus 38 ~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~-~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~G~~p~~~~ 116 (360)
.+.+||++++++|.+++++|++|+++++|++ .++.|+.++.|+++|||+||+|+||+|++|+++|+|+|++|+|||+++
T Consensus 3 ~~~~~~~a~~~~l~~l~~~~~~vv~~~~D~~~~~g~~~~~~~~~~~~gp~r~~~~gisE~~~~~~a~G~A~~G~rp~~~~ 82 (338)
T 1qs0_B 3 TTMTMIQALRSAMDVMLERDDNVVVYGQDVGYFGGVFRCTEGLQTKYGKSRVFDAPISESGIVGTAVGMGAYGLRPVVEI 82 (338)
T ss_dssp EECCHHHHHHHHHHHHHHHCTTEEEEETTCSSSCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CcchHHHHHHHHHHHHHhhCCCEEEECCcccccCCcchhHHHHHHHhCCCcEEEccccHHHHHHHHHHHHhCCCEEEEEe
Confidence 4579999999999999999999999999998 566677789999999999999999999999999999999999999986
Q ss_pred cCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCCCchHHHHHcCCCCcEEEeeCCHHHHHHHHHH
Q 018167 117 QFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLS 196 (360)
Q Consensus 117 ~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~ 196 (360)
||++|++|++|||++++|+++|+++++.++ +++++.+.++.+.+++||+++|+++||++|||+|++|+|++|++.++++
T Consensus 83 t~~~F~~~a~dqi~~~~a~~~~~~~~~~~~-pvv~~~~~~g~~~G~th~s~~d~~~l~~iP~l~V~~Psd~~e~~~~l~~ 161 (338)
T 1qs0_B 83 QFADYFYPASDQIVSEMARLRYRSAGEFIA-PLTLRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIA 161 (338)
T ss_dssp SCGGGCGGGHHHHHTTTTTHHHHTTTSSCC-CCEEEEEECCSSSCCSSSSCCCHHHHTTSTTCEEECCCSHHHHHHHHHH
T ss_pred ccHhHHHHHHHHHHHHHHHHhhhcCCCCCC-CEEEEEeCCCCCCCcccccccHHHHHhcCCCCEEEeeCCHHHHHHHHHH
Confidence 899999999999999999999998886666 7776655444445566778999999999999999999999999999999
Q ss_pred hHhCCCCEEEeccccccccCcc----------------cCCCCCcccCCCceEEeeeCCcEEEEEechhHHHHHHHHHHH
Q 018167 197 CIRDPNPVVFFEPKWLYRLSVE----------------EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDA 260 (360)
Q Consensus 197 a~~~~~P~~i~~~k~l~r~~~~----------------~v~~~~~~~~~Gk~~vl~~G~dv~Iia~G~~~~~al~Aa~~L 260 (360)
|+++++|++||+|++++|...+ .++++++.+++||++++++|.|++|||+|++++.|++|++.
T Consensus 162 A~~~~~Pv~i~~p~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~~~~~~g~dv~iva~G~~~~~a~~Aa~~- 240 (338)
T 1qs0_B 162 SIECDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPHSAVPDGYYTVPLDKAAITRPGNDVSVLTYGTTVYVAQVAAEE- 240 (338)
T ss_dssp HHHSSSCEEEEEEGGGSSSCCCSCSSSCCCCSTTSTTCEEESSCCCCCTTCCCEEECCSSCEEEECTTHHHHHHHHHHH-
T ss_pred HHhcCCcEEEEEchHhhcCcccccccCccchhhcccccccCCCCcccccCceeEecCCCCEEEEEeCHHHHHHHHHHHH-
Confidence 9999999999999999988655 55555667889999999999999999999999999999997
Q ss_pred HhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCCCccc-cc
Q 018167 261 EKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL-VF 339 (360)
Q Consensus 261 ~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~~~~~-~~ 339 (360)
+|++++|||++|++|||++.|.++++++++++|+|||...||||++|++++.++++..+..|+.+++..|.+.+. ++
T Consensus 241 --~Gi~v~vi~~~~l~P~d~~~i~~~~~~~~~vvvvEe~~~~gG~g~~V~~~l~~~~~~~l~~~v~~ig~~d~~~~~~l~ 318 (338)
T 1qs0_B 241 --SGVDAEVIDLRSLWPLDLDTIVESVKKTGRCVVVHEATRTCGFGAELVSLVQEHCFHHLEAPIERVTGWDTPYPHAQE 318 (338)
T ss_dssp --HCCCCEEEECSEEESCCHHHHHHHHHHHSCEEEEESSCSTTSTHHHHHHHHHHHSSSSCCSCCEEEECCSSCCCSTTH
T ss_pred --cCCCEEEEeecccCCCCHHHHHHHHhcCCEEEEEecCCcCCcHHHHHHHHHHHhcccccCCCeEEEecCCcCCcHHHH
Confidence 699999999999999999999999999999999999998999999999999987755556789999877765433 78
Q ss_pred cccCCCCHHHHHHHHHHhhh
Q 018167 340 EPFYMPTKNKILDAIKSTVN 359 (360)
Q Consensus 340 e~~gl~~~~~I~~~i~~~l~ 359 (360)
+++++ |+++|+++|+++++
T Consensus 319 ~~~g~-~~~~I~~~i~~~l~ 337 (338)
T 1qs0_B 319 WAYFP-GPSRVGAALKKVME 337 (338)
T ss_dssp HHHSC-CHHHHHHHHHHSSC
T ss_pred HHHCC-CHHHHHHHHHHHhc
Confidence 88888 99999999999864
No 6
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=100.00 E-value=3.3e-67 Score=508.51 Aligned_cols=321 Identities=37% Similarity=0.606 Sum_probs=285.1
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCEEEEcCCCC-CCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcCCCeeEEE
Q 018167 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAE 115 (360)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~-~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~G~~p~~~ 115 (360)
+.+++||++++++|.+++++|++|+++++|++ +|+.|+.+++|+++|||+||+|+||+||+|+++|+|+|++|++||++
T Consensus 12 ~~~~~~~~a~~~~L~~l~~~~~~vv~~~~D~~~~g~~~~~~~~~~~~~gp~r~~d~gIaE~~~v~~a~G~A~~G~rp~~~ 91 (341)
T 2ozl_B 12 SLQVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICE 91 (341)
T ss_dssp CCEEEHHHHHHHHHHHHHHHCTTEEEEETTSSTTCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cccccHHHHHHHHHHHHHhhCCCEEEECCcccccCCcchhHHHHHHHhCCCcEEECchhHHHHHHHHHHHHHCCCEEEEE
Confidence 35689999999999999999999999999998 45556668899999999999999999999999999999999999999
Q ss_pred ecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCCCchHHHHHcCCCCcEEEeeCCHHHHHHHHH
Q 018167 116 IQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLL 195 (360)
Q Consensus 116 ~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~ 195 (360)
+||++|++|++|||++++|+.+|++++..++ +++++.++|..|.+|++||+..+++||++|||+|++|+|++|++.+++
T Consensus 92 ~~f~~F~~~a~dqi~~~~a~~~y~~~g~~~~-pvv~~~~~G~~g~~G~tHs~~~ea~l~~iP~l~V~~Psd~~e~~~~l~ 170 (341)
T 2ozl_B 92 FMTFNFSMQAIDQVINSAAKTYYMSGGLQPV-PIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIK 170 (341)
T ss_dssp CSSGGGGGGGHHHHHTTTTTHHHHTTSSCCC-CCEEEEECSCCSSCCGGGCCCCHHHHHTSTTCEEECCCSHHHHHHHHH
T ss_pred eccHHHHHHHHHHHHHHHHHHHhhccccCCC-CEEEEEcCcCCCCCCcchhhHHHHHhccCCCCEEEEeCCHHHHHHHHH
Confidence 7799999999999999999888888766666 666666556777788888533239999999999999999999999999
Q ss_pred HhHhCCCCEEEeccccccccC--c-ccCCCCCcccCCCceEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEe
Q 018167 196 SCIRDPNPVVFFEPKWLYRLS--V-EEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (360)
Q Consensus 196 ~a~~~~~P~~i~~~k~l~r~~--~-~~v~~~~~~~~~Gk~~vl~~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~ 272 (360)
+|+++++|++||+||.+++.. . |.++++++.+++||++++++|.|++|||+|+++..|++|++.|+++|++++|||+
T Consensus 171 ~a~~~~~Pv~i~~~~~~~~~~~~v~p~~~~~~~~~~~Gk~~v~~~g~dv~iia~Gs~~~~a~~Aa~~L~~~Gi~v~vv~~ 250 (341)
T 2ozl_B 171 SAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINM 250 (341)
T ss_dssp HHHHSSSCEEEEECHHHHTCEEECCHHHHSTTCCCCTTCCEEEECCSSEEEEECSTHHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred HHHhcCCCEEEEEChhhhcCCCCcCCccCCccccccCCceEEeccCCCEEEEEeCHHHHHHHHHHHHHHhcCCCeEEEee
Confidence 999999999999999876632 2 2234556778999999999999999999999999999999999999999999999
Q ss_pred ccccCCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHH-hccccCCCceEEEecCCCCcc---ccccccCCCCHH
Q 018167 273 KTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILE-RCFLRLEAPVARVCGLDTPFP---LVFEPFYMPTKN 348 (360)
Q Consensus 273 ~~ikP~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~-~~~~~l~~~~~~i~~~~~~~~---~~~e~~gl~~~~ 348 (360)
++++|||++.|.+++++++++||+||+...||||++|++++.+ +++..++.|+.+++..|.+.+ .+++++|+ |++
T Consensus 251 ~~l~P~d~~~i~~~~~~~~~vv~vEe~~~~Gg~g~~v~~~l~~~~~~~~l~~~v~~ig~~d~~~~~g~~l~~~~g~-~~~ 329 (341)
T 2ozl_B 251 RTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIP-QVK 329 (341)
T ss_dssp CEEETCCHHHHHHHHHHHSCEEEECSSCSTTCHHHHHHHHHHHSTTGGGCSSCCEEECCCSSCCCSSHHHHHTTSC-CHH
T ss_pred eeecCCCHHHHHHHHhcCCeEEEEecCcccCcHHHHHHHHHHhhhcccccCCCEEEEecCCcCCCCcHHHHHHhCc-CHH
Confidence 9999999999999999999999999999899999999999998 876666789999977676543 45778888 999
Q ss_pred HHHHHHHHhhh
Q 018167 349 KILDAIKSTVN 359 (360)
Q Consensus 349 ~I~~~i~~~l~ 359 (360)
+|+++|+++++
T Consensus 330 ~I~~~i~~~l~ 340 (341)
T 2ozl_B 330 DIIFAIKKTLN 340 (341)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99999999875
No 7
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=100.00 E-value=3.9e-59 Score=483.24 Aligned_cols=297 Identities=21% Similarity=0.257 Sum_probs=261.8
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcCCC-eeEEE
Q 018167 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGN-RAIAE 115 (360)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~G~-~p~~~ 115 (360)
+.++++|++++++|.+++++||+|+++++|++.|+ .+..|+++| |+||||+||+||+|+++|+|||++|. +|++.
T Consensus 310 ~~~~a~r~a~~~~L~~l~~~d~~vv~~~aD~~~~~---~~~~~~~~~-p~R~~d~gIaE~~~v~~a~G~A~~G~~~~~~~ 385 (616)
T 3mos_A 310 GDKIATRKAYGQALAKLGHASDRIIALDGDTKNST---FSEIFKKEH-PDRFIECYIAEQNMVSIAVGCATRNRTVPFCS 385 (616)
T ss_dssp TCBCCHHHHHHHHHHHHHHHCTTEEEEESSCHHHH---SHHHHHHHC-GGGEEECCSCHHHHHHHHHHHHGGGCCEEEEE
T ss_pred ccchHHHHHHHHHHHHHHhhCCCEEEEeCCcCCCc---chhhHHHhC-CCCeEEcCccHHHHHHHHHHHHHcCCCCEEEE
Confidence 45688999999999999999999999999998432 368999999 99999999999999999999999997 68887
Q ss_pred ecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCC-CchHHHHHcCCCCcEEEeeCCHHHHHHHH
Q 018167 116 IQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIPRSPRQAKGLL 194 (360)
Q Consensus 116 ~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~H-s~~d~a~~r~iPn~~V~~P~d~~e~~~~l 194 (360)
+|++|++|++|||+++ ++++ +|+ .+++.+.+...|.+|+|| +++|+++||++|||+|++|+|++|++.++
T Consensus 386 -~f~~Fl~~a~dqi~~~-a~~~------~~v-~~v~~~~g~~~G~dG~tH~~~ed~a~l~~iP~l~V~~P~d~~e~~~~l 456 (616)
T 3mos_A 386 -TFAAFFTRAFDQIRMA-AISE------SNI-NLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTVFYPSDGVATEKAV 456 (616)
T ss_dssp -EEGGGGGGGHHHHHHH-HHTT------CCE-EEEEESBSGGGCTTCGGGCBSSHHHHHHTSTTEEEECCCSHHHHHHHH
T ss_pred -ehHHHHHHHHHHHHHH-HHhC------CCe-EEEEECCCccccCCCCcccCHHHHHHhcCCCCCEEEecCCHHHHHHHH
Confidence 6999999999999985 7666 466 666555555578777766 69999999999999999999999999999
Q ss_pred HHhHhCCCCEEEeccccccccCcccCCCCCcccCCCceEEeeeCCc--EEEEEechhHHHHHHHHHHHHhcCCCeeEEEe
Q 018167 195 LSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSD--ITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (360)
Q Consensus 195 ~~a~~~~~P~~i~~~k~l~r~~~~~v~~~~~~~~~Gk~~vl~~G~d--v~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~ 272 (360)
+++++.++|+|||++| ...|.++...+.+++||++++++|+| ++|||+|++++.|++|+++|+++||+++|||+
T Consensus 457 ~~a~~~~gp~~ir~~r----~~~p~~~~~~~~~~~Gka~vl~eg~d~dv~iva~G~~v~~al~Aa~~L~~~Gi~v~Vidl 532 (616)
T 3mos_A 457 ELAANTKGICFIRTSR----PENAIIYNNNEDFQVGQAKVVLKSKDDQVTVIGAGVTLHEALAAAELLKKEKINIRVLDP 532 (616)
T ss_dssp HHHHTCCSEEEEECCS----SCCBCCSCTTCCCCTTCCEEEECCSSEEEEEECCTHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHhcCCCEEEEEeC----CCCCccCCCcccccCCeEEEEEeCCCCCEEEEEeCHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 9999999999996654 45565655567788999999999977 99999999999999999999999999999999
Q ss_pred ccccCCcHHHHHHHHhcC-CeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCCCc----cccccccCCCCH
Q 018167 273 KTLIPWDKETVEASVRKT-GRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPF----PLVFEPFYMPTK 347 (360)
Q Consensus 273 ~~ikP~d~~~l~~~~~~~-~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~~~----~~~~e~~gl~~~ 347 (360)
+||+|||+++|.++++++ ++|||||||+..||+|++|++++.+.. ..|+++++..+-+. .++++++|| |+
T Consensus 533 r~l~PlD~e~i~~~~~~~~~~vvvvEe~~~~GG~G~~v~~~l~~~~----~~~v~~~g~~~f~~~g~~~~l~~~~gl-~~ 607 (616)
T 3mos_A 533 FTIKPLDRKLILDSARATKGRILTVEDHYYEGGIGEAVSSAVVGEP----GITVTHLAVNRVPRSGKPAELLKMFGI-DR 607 (616)
T ss_dssp SEEESCCHHHHHHHHHHTTTEEEEEEEEESTTSHHHHHHHHHTTCT----TCEEEEEEECSCCCCSCHHHHHHHTTC-SH
T ss_pred CccCCCCHHHHHHHHHhcCCEEEEEcCCCCCcCHHHHHHHHHHhcC----CCCEEEEeCCCCCCCCCHHHHHHHHCc-CH
Confidence 999999999999999999 999999999999999999999998864 56899997664221 257899999 99
Q ss_pred HHHHHHHH
Q 018167 348 NKILDAIK 355 (360)
Q Consensus 348 ~~I~~~i~ 355 (360)
++|+++|+
T Consensus 608 ~~I~~~i~ 615 (616)
T 3mos_A 608 DAIAQAVR 615 (616)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99999986
No 8
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=100.00 E-value=3.2e-57 Score=471.02 Aligned_cols=296 Identities=20% Similarity=0.300 Sum_probs=262.9
Q ss_pred cccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcCCCeeEEEecC
Q 018167 39 SLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQF 118 (360)
Q Consensus 39 ~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~G~~p~~~~~f 118 (360)
..+|+++|+++|.+++++|++|+++++|+..|+ .+.+|+++| |+||||+||+|++|+++|+|+|++|+|||+++ |
T Consensus 321 ~~~~~~~~~~~l~~~~~~d~~v~~i~~d~~~~~---~~~~f~~~~-~~r~~~~gIaE~~~~~~a~G~A~~G~rp~~~~-~ 395 (629)
T 2o1x_A 321 AYSWSAAFGEAVTEWAKTDPRTFVVTPAMREGS---GLVEFSRVH-PHRYLDVGIAEEVAVTTAAGMALQGMRPVVAI-Y 395 (629)
T ss_dssp CCBHHHHHHHHHHHHHHHCTTEEEEESSCTTTT---TCHHHHHHC-GGGEEECCSCHHHHHHHHHHHHHTTCEEEEEE-E
T ss_pred hHHHHHHHHHHHHHHhhhCcCEEEEeccccCCc---ChHHHHHhc-CcceEeccccHHHHHHHHHHHHHcCCEEEEEe-c
Confidence 578999999999999999999999999997442 368999999 99999999999999999999999999999995 9
Q ss_pred cccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCCC-chHHHHHcCCCCcEEEeeCCHHHHHHHHHHh
Q 018167 119 ADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHS-QSPEAFFCHVPGLKVVIPRSPRQAKGLLLSC 197 (360)
Q Consensus 119 ~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~Hs-~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~a 197 (360)
++|++|++|||++++|+++ +|+ .+++.+ +|..|.+|++|+ .+|+++||++|||+|++|+|++|++.++++|
T Consensus 396 ~~F~~~a~dqi~~~~a~~~------~pv-v~~~~~-~g~~g~dG~tH~~~~d~a~~r~iP~l~v~~P~d~~e~~~~~~~a 467 (629)
T 2o1x_A 396 STFLQRAYDQVLHDVAIEH------LNV-TFCIDR-AGIVGADGATHNGVFDLSFLRSIPGVRIGLPKDAAELRGMLKYA 467 (629)
T ss_dssp HHHHGGGHHHHHHTTTTTT------CCC-EEEEES-BBCCCTTCTTTCBCSHHHHTTTSTTCEEECCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcC------CCE-EEEEEC-CccCCCCCcccCccHHHHHHHccCCcEEEecCCHHHHHHHHHHH
Confidence 9999999999999999877 456 555433 444677777775 8999999999999999999999999999999
Q ss_pred HhCCCCEEEeccccccccCcccCC-CCCcccCCCceEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEecccc
Q 018167 198 IRDPNPVVFFEPKWLYRLSVEEVP-EDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLI 276 (360)
Q Consensus 198 ~~~~~P~~i~~~k~l~r~~~~~v~-~~~~~~~~Gk~~vl~~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ik 276 (360)
++.++|+|||++|... +.++ ++.+.+++|+++++++|+|++|||+|+++..|++|++.|+ +++|||++|++
T Consensus 468 ~~~~~Pv~i~~~r~~~----~~~~~~~~~~~~~G~~~~~~~g~dv~iva~G~~v~~a~~Aa~~L~----~~~Vi~~~~~~ 539 (629)
T 2o1x_A 468 QTHDGPFAIRYPRGNT----AQVPAGTWPDLKWGEWERLKGGDDVVILAGGKALDYALKAAEDLP----GVGVVNARFVK 539 (629)
T ss_dssp HHSSSCEEEECCSSBC----CCCCTTCCCCCCTTCCEEEECCSSEEEEECHHHHHHHHHHHTTCT----TEEEEECCEEE
T ss_pred HhCCCCEEEEecCCCC----CCCcccccccccCCceEEEeeCCCEEEEEecHHHHHHHHHHHHhc----CCEEEeeCCCC
Confidence 9999999998887533 2333 2346788999999999999999999999999999999996 89999999999
Q ss_pred CCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCCCc-----cccccccCCCCHHHHH
Q 018167 277 PWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPF-----PLVFEPFYMPTKNKIL 351 (360)
Q Consensus 277 P~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~~~-----~~~~e~~gl~~~~~I~ 351 (360)
|||++.+.+++++++++||||||+..||+|++|++++.+++ ++.|+.+++..|.+. .++++++|+ |+++|+
T Consensus 540 Pld~~~i~~~~~~~~~vv~vEe~~~~gG~g~~v~~~l~~~~---~~~~v~~ig~~d~f~~~g~~~~l~~~~gl-~~~~I~ 615 (629)
T 2o1x_A 540 PLDEEMLREVGGRARALITVEDNTVVGGFGGAVLEALNSMN---LHPTVRVLGIPDEFQEHATAESVHARAGI-DAPAIR 615 (629)
T ss_dssp SCCHHHHHHHHHHCSEEEEEEEEESSSSHHHHHHHHHHHTT---CCCEEEEEEECSSCCCSCCHHHHHHHHTC-SHHHHH
T ss_pred CCcHHHHHHHHhhCCcEEEEecCCCCCCHHHHHHHHHHHhC---CCCCeEEEeeCCcCCCCCCHHHHHHHHCc-CHHHHH
Confidence 99999999999999999999999999999999999999875 367899997767543 357899999 999999
Q ss_pred HHHHHhhh
Q 018167 352 DAIKSTVN 359 (360)
Q Consensus 352 ~~i~~~l~ 359 (360)
++|+++++
T Consensus 616 ~~i~~~~~ 623 (629)
T 2o1x_A 616 TVLAELGV 623 (629)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHHh
Confidence 99999865
No 9
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.8e-57 Score=468.10 Aligned_cols=297 Identities=18% Similarity=0.291 Sum_probs=261.0
Q ss_pred CcccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcCCCeeEEEec
Q 018167 38 KSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQ 117 (360)
Q Consensus 38 ~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~G~~p~~~~~ 117 (360)
...+|+++|+++|.+++++|++|+++++|+..|+ .+.+|+++| |+||||+||+|++|+++|+|+|++|+|||+++
T Consensus 317 ~~~~~~~~~~~~l~~~~~~d~~v~~~~~d~~~~~---~~~~~~~~~-~~r~~~~gIaE~~~~~~a~G~A~~G~rp~~~~- 391 (621)
T 2o1s_A 317 GLPSYSKIFGDWLCETAAKDNKLMAITPAMREGS---GMVEFSRKF-PDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAI- 391 (621)
T ss_dssp -CCBHHHHHHHHHHHHHHHCTTEEEEESSCTTTT---TCHHHHHHC-TTTEEECCSCHHHHHHHHHHHHHTTCEEEEEE-
T ss_pred chHHHHHHHHHHHHHHHhhCcCEEEEeCcccCCc---ChHHHHHhC-CCceEecCcCHHHHHHHHHHHHHCCCEEEEEe-
Confidence 3579999999999999999999999999997442 368999999 99999999999999999999999999999995
Q ss_pred CcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCCC-chHHHHHcCCCCcEEEeeCCHHHHHHHHHH
Q 018167 118 FADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHS-QSPEAFFCHVPGLKVVIPRSPRQAKGLLLS 196 (360)
Q Consensus 118 f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~Hs-~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~ 196 (360)
|++|++|++|||++++|+++ +|+ .+++.+ +|..|.+|++|+ .+|+++||++|||+|++|+|++|++.++++
T Consensus 392 ~~~F~~~a~dqi~~~~a~~~------~pv-v~~~~~-~g~~g~~G~tH~~~~d~~~~~~iP~l~v~~P~d~~e~~~~l~~ 463 (621)
T 2o1s_A 392 YSTFLQRAYDQVLHDVAIQK------LPV-LFAIDR-AGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYT 463 (621)
T ss_dssp ETTGGGGGHHHHHHTTTTTT------CCC-EEEEES-CBCCCTTCGGGCBCSHHHHTTTSTTCEEECCSSHHHHHHHHHH
T ss_pred hHhHHHHHHHHHHHHHHhcC------CCE-EEEEEC-CccCCCCCCccCchHHHHHHhcCCCCEEEecCCHHHHHHHHHH
Confidence 99999999999999999876 455 454433 444677788886 899999999999999999999999999999
Q ss_pred hHhC-CCCEEEeccccccccCcccCCCCCcccCCCceEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccc
Q 018167 197 CIRD-PNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTL 275 (360)
Q Consensus 197 a~~~-~~P~~i~~~k~l~r~~~~~v~~~~~~~~~Gk~~vl~~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~i 275 (360)
|++. ++|+|||+||..... ..+++. +.+++|+++++++|+|++|||+|++++.|++| ++|++++|||++|+
T Consensus 464 a~~~~~~Pv~i~~~r~~~~~--~~~~~~-~~~~~G~~~~~~~g~dv~iva~G~~~~~a~~A-----~~Gi~v~Vi~~~~~ 535 (621)
T 2o1s_A 464 GYHYNDGPSAVRYPRGNAVG--VELTPL-EKLPIGKGIVKRRGEKLAILNFGTLMPEAAKV-----AESLNATLVDMRFV 535 (621)
T ss_dssp HHHCCSSCEEEECCSSBCCC--CCCCCC-CCCCTTCCEEEECCSSEEEEEESTTHHHHHHH-----HHHHTCEEEECCEE
T ss_pred HHHcCCCCEEEEeCCCCCCC--CCCCcc-ccccCCceEEeecCCCEEEEEecHHHHHHHHH-----cCCCCEEEEecCcc
Confidence 9998 999999988764321 112222 67889999999999999999999999999999 56999999999999
Q ss_pred cCCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCCCc-----cccccccCCCCHHHH
Q 018167 276 IPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPF-----PLVFEPFYMPTKNKI 350 (360)
Q Consensus 276 kP~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~~~-----~~~~e~~gl~~~~~I 350 (360)
+|||++.+.+++++++++|||||+...||||++|++++.+++ ++.|+.+++..|.+. .++++++|+ |+++|
T Consensus 536 ~P~d~~~i~~~~~~~~~vv~vEe~~~~gg~g~~v~~~l~~~~---~~~~v~~ig~~d~f~~~g~~~~l~~~~g~-~~~~I 611 (621)
T 2o1s_A 536 KPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAHR---KPVPVLNIGLPDFFIPQGTQEEMRAELGL-DAAGM 611 (621)
T ss_dssp ESCCHHHHHHHHHHCSEEEEEEEEESTTSHHHHHHHHHHHTT---CCCCEEEEEECSSCCCCSCHHHHHHHTTC-SHHHH
T ss_pred CCCCHHHHHHHHccCCeEEEEECCCCCCCHHHHHHHHHHhcC---CCCCeEEEecCCcCCCCCCHHHHHHHHCc-CHHHH
Confidence 999999999999999999999999999999999999999875 367999997767543 357899999 99999
Q ss_pred HHHHHHhhh
Q 018167 351 LDAIKSTVN 359 (360)
Q Consensus 351 ~~~i~~~l~ 359 (360)
+++|+++++
T Consensus 612 ~~~i~~~l~ 620 (621)
T 2o1s_A 612 EAKIKAWLA 620 (621)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 999999875
No 10
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=100.00 E-value=2.3e-54 Score=450.79 Aligned_cols=299 Identities=12% Similarity=0.132 Sum_probs=240.8
Q ss_pred CCCcccHHHHHHHHHHHHHhcCCCEEEEcCCCC--CCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcC-CCee
Q 018167 36 SGKSLNLYSAINQALHIALETDPRAYVFGEDVG--FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRA 112 (360)
Q Consensus 36 ~~~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~--~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~-G~~p 112 (360)
++.+++||++++++|.++++++|+++++++|++ .++.++.+++|+++|+|+||||+||+||+|+++|+|||++ |++|
T Consensus 375 ~~~~~a~R~a~g~~L~~~~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~~~~R~~d~GIaE~~mv~~A~GlA~~gG~~P 454 (690)
T 3m49_A 375 LGSKAATRNSSGAVINAIAESVPSFFGGSADLAGSNKTYMNNEKDFTRDDYSGKNIWYGVREFAMGAAMNGIALHGGLKT 454 (690)
T ss_dssp TTCEEEHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCCTTSCBCBTTBTTCCEEECCSCHHHHHHHHHHHHHHSSCEE
T ss_pred cccchHHHHHHHHHHHHHHhhCCCEEEEeCcccccCCccccccccchhhcCCCceEEcCchHHHHHHHHHHHHHcCCCEE
Confidence 356789999999999999999999999999997 2333455778998887999999999999999999999999 8999
Q ss_pred EEEecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCC-CchHHHHHcCCCCcEEEeeCCHHHHH
Q 018167 113 IAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIPRSPRQAK 191 (360)
Q Consensus 113 ~~~~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~H-s~~d~a~~r~iPn~~V~~P~d~~e~~ 191 (360)
|++ +|+.|+..+..||| ++|+++ +|| .+++.+.+.++|.+|+|| +++|+++||+||||+|++|+|+.|++
T Consensus 455 ~~~-tf~~Fs~f~~~air-~~al~~------lpV-v~v~~~~gigvG~dG~THq~ied~a~lr~iPnl~V~~Pad~~E~~ 525 (690)
T 3m49_A 455 YGG-TFFVFSDYLRPAIR-LAALMQ------LPV-TYVFTHDSIAVGEDGPTHEPIEQLAALRAMPNVSVIRPADGNESV 525 (690)
T ss_dssp EEE-EEGGGGGGGHHHHH-HHHHHT------CCC-EEEEECCSGGGCTTCGGGCCSSHHHHHHTSTTCEEECCSSHHHHH
T ss_pred EEE-ecHHHHHHHHHHHH-HHHhcC------CCc-EEEEECCCcCCCCCCCccCCHHHHHHHhcCCCCEEEeeCCHHHHH
Confidence 999 46555543444677 489887 467 677666666678888777 59999999999999999999999999
Q ss_pred HHHHHhHhC-CCCEEEeccccccccCcccCCCCC----cccCCCceEEeeeCC----cEEEEEechhHHHHHHHHHHHHh
Q 018167 192 GLLLSCIRD-PNPVVFFEPKWLYRLSVEEVPEDD----YMLPLSEAEVIREGS----DITLVGWGAQLSIMEQACLDAEK 262 (360)
Q Consensus 192 ~~l~~a~~~-~~P~~i~~~k~l~r~~~~~v~~~~----~~~~~Gk~~vl~~G~----dv~Iia~G~~~~~al~Aa~~L~~ 262 (360)
.+|++|+++ ++|+|||+|| +..|.++.++ +.+++|+ +++++|+ |++|||+|++++.|++|++.|++
T Consensus 526 ~~l~~Ai~~~~~Pv~ir~~R----~~~p~~~~~~~~~~~~~~~G~-~vlr~g~~g~~dvtiia~G~~v~~Al~Aa~~L~~ 600 (690)
T 3m49_A 526 AAWRLALESTNKPTALVLTR----QDLPTLEGAKDDTYEKVAKGA-YVVSASKKETADVILLATGSEVSLAVEAQKALAV 600 (690)
T ss_dssp HHHHHHHHCSSSCEEEECCS----SEEECCHHHHTTHHHHHHTSC-EEEECCSSSSCSEEEEECTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEEeec----ccCCCCCccccccccccCCCe-EEEEecCCCCCCEEEEEechHHHHHHHHHHHHHh
Confidence 999999998 7999997765 4444443322 4678887 7889986 99999999999999999999999
Q ss_pred cCCCeeEEEeccccCCcH--HHHHHHHh--cCCeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCCCcccc
Q 018167 263 EGISCELIDLKTLIPWDK--ETVEASVR--KTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLV 338 (360)
Q Consensus 263 ~Gi~v~Vi~~~~ikP~d~--~~l~~~~~--~~~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~~~~~~ 338 (360)
+||+++|||++|++|||. +.+++++. +++++|||||+...| | .+++...+. ...+.++ +...+..++
T Consensus 601 ~GI~~~Vid~~~i~p~D~~d~~~~~~v~~~~~~~~v~vEe~~~~G-~----~~~~~~~~~---~igid~F-g~sg~~~~l 671 (690)
T 3m49_A 601 DGVDASVVSMPSMDRFEAQTAEYKESVLPKAVTKRFAIEMGATFG-W----HRYVGLEGD---VLGIDTF-GASAPGEKI 671 (690)
T ss_dssp TTCCEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEECSSCCTT-T----HHHHTTTCE---EECCCSC-CCSSCHHHH
T ss_pred cCCCeEEEecccCCcCccccHHHHHHHhhccCCeEEEEECCchhh-H----HHHhccCCC---EEccCcC-cCcCCHHHH
Confidence 999999999999999996 55666665 467899999998765 4 344433220 1111222 333455688
Q ss_pred ccccCCCCHHHHHHHHHHhh
Q 018167 339 FEPFYMPTKNKILDAIKSTV 358 (360)
Q Consensus 339 ~e~~gl~~~~~I~~~i~~~l 358 (360)
+++||| |+++|+++|+++|
T Consensus 672 ~~~~Gl-t~e~I~~~i~~~l 690 (690)
T 3m49_A 672 MEEYGF-TVENVVRKVKEML 690 (690)
T ss_dssp HHHTTC-SHHHHHHHHHHHC
T ss_pred HHHHCc-CHHHHHHHHHHhC
Confidence 999999 9999999999875
No 11
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.5e-54 Score=449.18 Aligned_cols=298 Identities=12% Similarity=0.107 Sum_probs=245.3
Q ss_pred CcccHHHHHHHHHHHHHhcCCCEEEEcCCCCC--CCccccchhHHHHh-----CC----CcEEechhHHHHHHHHHHHHh
Q 018167 38 KSLNLYSAINQALHIALETDPRAYVFGEDVGF--GGVFRCTTGLADRF-----GK----SRVFNTPLCEQGIVGFAIGLA 106 (360)
Q Consensus 38 ~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~--g~~~~~~~~~~~~~-----gp----~r~i~~GIaE~~~vg~AaGlA 106 (360)
.++++|++++++|.+++++||+|+++++|++. ++.++.+..|+++| || +||||+||+||+|+++|+|||
T Consensus 373 ~~~atr~a~~~~L~~l~~~~p~vv~~saDl~~s~~t~~~~~~~f~~~~~~~~~~p~~~~~R~id~GIaE~~mv~~A~GlA 452 (700)
T 3rim_A 373 KALATRAASGAVLSALGPKLPELWGGSADLAGSNNTTIKGADSFGPPSISTKEYTAHWYGRTLHFGVREHAMGAILSGIV 452 (700)
T ss_dssp SCEEHHHHHHHHHHHHTTTCTTEEEEESSCHHHHTCSCTTCCEESCGGGCCSSCCEETTCCEEECCSCHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhhCCCEEEEeCCccCCCCcccccchhhcccccccccCCcccCCceeecCccHHHHHHHHHHHH
Confidence 56899999999999999999999999999972 22223467898888 46 599999999999999999999
Q ss_pred cC-CCeeEEEecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCC-CchHHHHHcCCCCcEEEee
Q 018167 107 AM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIP 184 (360)
Q Consensus 107 ~~-G~~p~~~~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~H-s~~d~a~~r~iPn~~V~~P 184 (360)
++ |++||++ ||+.|+.++++|||. +|+++ +|| .+++++.+.++|++|+|| ++||+++||+||||+|++|
T Consensus 453 ~~gG~~Pv~~-tF~~F~d~~~~~ir~-~al~~------lpv-v~v~thdg~gvG~dG~THq~ied~a~lr~iPnl~V~~P 523 (700)
T 3rim_A 453 LHGPTRAYGG-TFLQFSDYMRPAVRL-AALMD------IDT-IYVWTHDSIGLGEDGPTHQPIEHLSALRAIPRLSVVRP 523 (700)
T ss_dssp HHSSCEEEEE-EEGGGGGGGHHHHHH-HHHHT------CCC-EEEEECCSGGGCTTCTTTSCSSHHHHHHTSTTCEEECC
T ss_pred HcCCCEEEEE-ecHHHHHHHHHHHHH-hcCCC------CCE-EEEEeCCCcccCCCCCccCChhHHHHHhcCCCCEEEeC
Confidence 99 9999999 699999888899985 89887 467 677777766688877777 5999999999999999999
Q ss_pred CCHHHHHHHHHHhHhCC---CCEEEeccccccccCcccCCCC-CcccCCCceEEeeeCC--------cEEEEEechhHHH
Q 018167 185 RSPRQAKGLLLSCIRDP---NPVVFFEPKWLYRLSVEEVPED-DYMLPLSEAEVIREGS--------DITLVGWGAQLSI 252 (360)
Q Consensus 185 ~d~~e~~~~l~~a~~~~---~P~~i~~~k~l~r~~~~~v~~~-~~~~~~Gk~~vl~~G~--------dv~Iia~G~~~~~ 252 (360)
+|+.|++.+|++|++++ +|+|||+|| +..|.++.+ .+.+++|+ +++++|+ |++||++|++++.
T Consensus 524 ad~~e~~~~l~~Ai~~~~~~~Pv~ir~~r----~~~~~~~~~~~~~~~~G~-~vlr~g~~~~~~~~~dvtiia~G~~v~~ 598 (700)
T 3rim_A 524 ADANETAYAWRTILARRNGSGPVGLILTR----QGVPVLDGTDAEGVARGG-YVLSDAGGLQPGEEPDVILIATGSEVQL 598 (700)
T ss_dssp SSHHHHHHHHHHHHTTTTCSSCEEEECCS----SEECCCTTCCHHHHHHSC-EEEECCSCCCTTCCCSEEEEECGGGHHH
T ss_pred CCHHHHHHHHHHHHHccCCCCCEEEEecc----ccCCCcCcccccccCCCc-EEEecCCccccCCCCCEEEEEechHHHH
Confidence 99999999999999985 599996665 455555544 36788898 7999987 9999999999999
Q ss_pred HHHHHHHHHhcCCCeeEEEeccccCCcHH--HHHHHHhc--CCeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEE
Q 018167 253 MEQACLDAEKEGISCELIDLKTLIPWDKE--TVEASVRK--TGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARV 328 (360)
Q Consensus 253 al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~--~l~~~~~~--~~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i 328 (360)
|++|++.|+++||+++|||++|++|||.+ .+++++.+ ++++|+|||+...|+ .+++.+.+ ....+.++
T Consensus 599 al~Aa~~L~~~Gi~~~VVd~~~i~p~D~~~~~~~~~v~~~~~~~~vtvEe~~~~G~-----~~~~~~~~---~~igid~F 670 (700)
T 3rim_A 599 AVAAQTLLADNDILARVVSMPCLEWFEAQPYEYRDAVLPPTVSARVAVEAGVAQCW-----HQLVGDTG---EIVSIEHY 670 (700)
T ss_dssp HHHHHHHHHTTTCCEEEEECSCHHHHHHSCHHHHHHHSCTTCCCEEEECSSCSGGG-----HHHHCTTC---EEECCCSC
T ss_pred HHHHHHHHHhcCCCeEEEEeccccccCcccHHHHHHHhcccceEEEEEeCCCchhH-----HHHHhcCC---cEEccCcC
Confidence 99999999999999999999999999994 45565544 678999999987654 34443322 01111222
Q ss_pred ecCCCCccccccccCCCCHHHHHHHHHHhhh
Q 018167 329 CGLDTPFPLVFEPFYMPTKNKILDAIKSTVN 359 (360)
Q Consensus 329 ~~~~~~~~~~~e~~gl~~~~~I~~~i~~~l~ 359 (360)
+...+..+++++||| |+++|+++|+++++
T Consensus 671 -g~sg~~~~l~~~~Gl-t~e~I~~~i~~~l~ 699 (700)
T 3rim_A 671 -GESADHKTLFREYGF-TAEAVAAAAERALD 699 (700)
T ss_dssp -CCSSCHHHHHHHTTC-SHHHHHHHHHHHHC
T ss_pred -cCcCCHHHHHHHhCc-CHHHHHHHHHHHhh
Confidence 333455688999999 99999999999875
No 12
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=100.00 E-value=4.1e-54 Score=449.79 Aligned_cols=293 Identities=15% Similarity=0.181 Sum_probs=244.7
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCEEEEcCCCCC-C-CccccchhHHHH---hCC---CcEEechhHHHHHHHHHHHHhcC
Q 018167 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVGF-G-GVFRCTTGLADR---FGK---SRVFNTPLCEQGIVGFAIGLAAM 108 (360)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~-g-~~~~~~~~~~~~---~gp---~r~i~~GIaE~~~vg~AaGlA~~ 108 (360)
++++++|++++++|.++++.+|+++++++|++. + +.++.+..|+++ | | +||||+||+||+|+++|+|||++
T Consensus 392 ~~~~atR~A~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~~~~-p~~~~R~~d~GIaE~~mv~~AaGlA~~ 470 (711)
T 3uk1_A 392 GETVATRKASQQTIEGLAAVLPELLGGSADLTGSNLTNWKASKAVRANADGP-GVQWGNHINYGVREFGMSAAINGLVLH 470 (711)
T ss_dssp CCCEEHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCCTTCCBCEECSSSS-SEECCSEEECCSCHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHhhCCCEEEEeccccCcCCcccccchhhhhhhccC-CCCCCcEEEeCccHHHHHHHHHHHHHc
Confidence 466899999999999999999999999999972 1 212345689888 9 8 99999999999999999999995
Q ss_pred -CCeeEEEecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCC-CchHHHHHcCCCCcEEEeeCC
Q 018167 109 -GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIPRS 186 (360)
Q Consensus 109 -G~~p~~~~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~H-s~~d~a~~r~iPn~~V~~P~d 186 (360)
|++||+++ |++|++|+++|||+ +|+++ +|+ .+++++.+.++|++|+|| +++|+++||+||||+|++|+|
T Consensus 471 ~G~~Pv~~~-f~~F~~~~~~~ir~-~a~~~------lpv-~~v~thdg~gvG~dG~THq~~ed~a~lr~iPnl~V~~Pad 541 (711)
T 3uk1_A 471 GGYKPFGGT-FLTFSDYSRNALRV-AALMK------VPS-IFVFTHDSIGLGEDGPTHQSVEHVASLRLIPNLDVWRPAD 541 (711)
T ss_dssp SSCEEEEEE-EGGGHHHHHHHHHH-HHHHT------CCC-EEEEECCSGGGCTTCTTTCCSSHHHHHHTSTTCEEECCSS
T ss_pred CCCEEEEEE-hHHHHHHHHHHHHH-hhhcC------CCE-EEEEECCCcCcCCCCCccCChhHHHHHhcCCCCEEEecCC
Confidence 99999995 99999999999995 78877 466 677666666678777766 599999999999999999999
Q ss_pred HHHHHHHHHHhHhCCCCEEEeccccccccCcccCCCCC---cccCCCceEEeee--C----CcEEEEEechhHHHHHHHH
Q 018167 187 PRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDD---YMLPLSEAEVIRE--G----SDITLVGWGAQLSIMEQAC 257 (360)
Q Consensus 187 ~~e~~~~l~~a~~~~~P~~i~~~k~l~r~~~~~v~~~~---~~~~~Gk~~vl~~--G----~dv~Iia~G~~~~~al~Aa 257 (360)
+.|++.+|++|++.++|+|||++| +..|.++..+ +.+++|++ ++++ | +|++||++|++++.|++|+
T Consensus 542 ~~E~~~~l~~Ai~~~~Pv~ir~~r----~~~p~~~~~~~~~~~i~~G~~-vl~~~~G~~~~~dvtiia~G~~v~~al~Aa 616 (711)
T 3uk1_A 542 TVETAVAWTYAVAHQHPSCLIFSR----QNLAFNARTDAQLANVEKGGY-VLRDWDEEIVARKIILIATGSEVELAMKAV 616 (711)
T ss_dssp HHHHHHHHHHHHHSSSCEEEECCS----SEECCCCCCHHHHHHGGGSSE-EEECCCSSCCSEEEEEEECTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEeeC----CCCCCCCCccccccccCCCeE-EEEecCCCCCCCCEEEEEecHHHHHHHHHH
Confidence 999999999999999999996664 4555554433 56788884 6774 7 7999999999999999999
Q ss_pred HHHHhcCCCeeEEEeccccCCcHHH--HHHHHhcCC-eEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEe----c
Q 018167 258 LDAEKEGISCELIDLKTLIPWDKET--VEASVRKTG-RLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVC----G 330 (360)
Q Consensus 258 ~~L~~~Gi~v~Vi~~~~ikP~d~~~--l~~~~~~~~-~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~----~ 330 (360)
+.|+++||+++|||++|++|||+++ +++++.+++ .+|++|++. .+||++.+. . +..++| +
T Consensus 617 ~~L~~~GI~~~Vid~~si~plD~~~~~~~~sv~~~~~~~V~vE~~~-~~g~~~~~g----~--------~~~~iGid~Fg 683 (711)
T 3uk1_A 617 EPLAQQGIAARVVSMPSSDVFDRQDAEYRERVLPHGVRRVAIEAGV-TDFWRKYVG----L--------EGGVVGIDTFG 683 (711)
T ss_dssp HHHHHTTEEEEEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSC-SGGGHHHHT----T--------TSEEECCCSCC
T ss_pred HHHHHcCCCeEEEecCcCCccchhHHHHHHHhhccCCeEEEEeCCc-cccHHHHhC----C--------CceEEEeCCCc
Confidence 9999999999999999999999986 667888876 489999985 567865441 1 223442 2
Q ss_pred CCCCccccccccCCCCHHHHHHHHHHhh
Q 018167 331 LDTPFPLVFEPFYMPTKNKILDAIKSTV 358 (360)
Q Consensus 331 ~~~~~~~~~e~~gl~~~~~I~~~i~~~l 358 (360)
...+..+++++||| |+++|++++++++
T Consensus 684 ~sg~~~~L~~~~Gl-t~e~Iv~~~~~~l 710 (711)
T 3uk1_A 684 ESAPAGVLFKHFGF-TVEHVIETAKAVL 710 (711)
T ss_dssp CSSCHHHHHHHTTC-SHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHCc-CHHHHHHHHHHHh
Confidence 23344678999999 9999999999986
No 13
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=100.00 E-value=5.4e-54 Score=444.47 Aligned_cols=285 Identities=14% Similarity=0.142 Sum_probs=235.6
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcC-CCeeEEE
Q 018167 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAE 115 (360)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~-G~~p~~~ 115 (360)
+.++++|++++++|.++++.+|+++++++|++.++ ...-.+.++|||+||||+||+||+|+++|+|||+. |++||++
T Consensus 335 ~~~~a~r~a~~~~l~~l~~~~p~~v~~~aDl~~s~--~~~~~~~~~f~p~R~~d~GIaE~~~v~~a~GlA~~gG~~P~~~ 412 (632)
T 3l84_A 335 GKDLATRDSNGEILNVLAKNLEGFLGGSADLGPSN--KTELHSMGDFVEGKNIHFGIREHAMAAINNAFARYGIFLPFSA 412 (632)
T ss_dssp TCCBCHHHHHHHHHHHHHHHCTTEEEEESSCHHHH--TCCCTTSCBTTTSSEEECCSCHHHHHHHHHHHHHHSSCEEEEE
T ss_pred ccchHHHHHHHHHHHHHHhhCCCEEEEecccCCcc--CcchhcccccCCCCeEEeCccHHHHHHHHHHHHHcCCCEEEEE
Confidence 35789999999999999999999999999997211 11112346788999999999999999999999999 9999999
Q ss_pred ecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCC-CchHHHHHcCCCCcEEEeeCCHHHHHHHH
Q 018167 116 IQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIPRSPRQAKGLL 194 (360)
Q Consensus 116 ~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~H-s~~d~a~~r~iPn~~V~~P~d~~e~~~~l 194 (360)
+ |++|+.|+++|||+ +|+++ +|| .+++++.+.++|.+|+|| +++|+++||+||||+|++|+|+.|++.+|
T Consensus 413 ~-f~~F~~~~~~~ir~-~a~~~------~pv-~~~~t~~g~g~G~dG~THq~~ed~a~lr~iP~l~V~~P~d~~e~~~~l 483 (632)
T 3l84_A 413 T-FFIFSEYLKPAARI-AALMK------IKH-FFIFTHDSIGVGEDGPTHQPIEQLSTFRAMPNFLTFRPADGVENVKAW 483 (632)
T ss_dssp E-EGGGHHHHHHHHHH-HHHHT------CCC-EEEEECCSGGGCTTCGGGSCSSHHHHHHHSSSCEEECCSSHHHHHHHH
T ss_pred e-cHHHHHHHHHHHHH-HhccC------CCE-EEEEECCCcCCCCCCCCCCCHhHHHHHhcCCCCEEEecCCHHHHHHHH
Confidence 5 99999999999985 88877 466 666666666688777766 69999999999999999999999999999
Q ss_pred HHhHhCCCCEEEeccccccccCcccCCCC-CcccCCCce-EEeee--CCcEEEEEechhHHHHHHHHHHHHhcCCCeeEE
Q 018167 195 LSCIRDPNPVVFFEPKWLYRLSVEEVPED-DYMLPLSEA-EVIRE--GSDITLVGWGAQLSIMEQACLDAEKEGISCELI 270 (360)
Q Consensus 195 ~~a~~~~~P~~i~~~k~l~r~~~~~v~~~-~~~~~~Gk~-~vl~~--G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi 270 (360)
++|+++++|+|||+||. .. ++.+ .+..+++++ +++++ |+|++|||+|++++.|++|++.|+++||+++||
T Consensus 484 ~~A~~~~~Pv~ir~~r~----~~--~~~~~~~~~~~~~g~~vl~~~~g~dvtiia~G~~v~~al~Aa~~L~~~Gi~~~Vi 557 (632)
T 3l84_A 484 QIALNADIPSAFVLSRQ----KL--KALNEPVFGDVKNGAYLLKESKEAKFTLLASGSEVWLCLESANELEKQGFACNVV 557 (632)
T ss_dssp HHHHHCSSCEEEECCSS----CB--CCCCCCSBCCGGGSSEEEECCTTCSEEEEECGGGHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHhCCCCEEEEEcCC----CC--CCCccccccccccccEEEEecCCCCEEEEEechHHHHHHHHHHHHHhcCCCeEEE
Confidence 99999999999977764 22 2322 233455654 88998 899999999999999999999999999999999
Q ss_pred EeccccCCcHHH--HHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEe----cCCCCccccccccCC
Q 018167 271 DLKTLIPWDKET--VEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVC----GLDTPFPLVFEPFYM 344 (360)
Q Consensus 271 ~~~~ikP~d~~~--l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~----~~~~~~~~~~e~~gl 344 (360)
|++|++|||+++ +++++.+ ++|||||||.. .||++.+ + .++| +...+..+++++|||
T Consensus 558 ~~~~i~PlD~~~~~~~~sv~~-~~vv~vE~~~~-~g~~~~~--------------~-~~iGid~Fg~sg~~~~l~~~~Gl 620 (632)
T 3l84_A 558 SMPCFELFEKQDKAYQERLLK-GEVIGVEAAHS-NELYKFC--------------H-KVYGIESFGESGKDKDVFERFGF 620 (632)
T ss_dssp ECSBHHHHHTSCHHHHHHHCC-SEEEEECSSCC-GGGGGTC--------------S-EEECCCSCCCSSCHHHHHHHTTC
T ss_pred ecCcCCCcchhHHHHHHHhcC-CCEEEEeCChh-hhHHHHh--------------C-eEEEcCCCcccCCHHHHHHHhCc
Confidence 999999999975 7778877 78999999964 5664321 1 3443 223344578999999
Q ss_pred CCHHHHHHHHHH
Q 018167 345 PTKNKILDAIKS 356 (360)
Q Consensus 345 ~~~~~I~~~i~~ 356 (360)
|+++|++++++
T Consensus 621 -t~~~I~~~i~~ 631 (632)
T 3l84_A 621 -SVSKLVNFILS 631 (632)
T ss_dssp -SHHHHHHHHTT
T ss_pred -CHHHHHHHHhh
Confidence 99999999864
No 14
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=100.00 E-value=3.1e-53 Score=443.76 Aligned_cols=297 Identities=15% Similarity=0.194 Sum_probs=246.4
Q ss_pred CCCcccHHHHHHHHHHHHHhcCCCEEEEcCCCCC-CCcc-ccchhHHH------HhCCCcEEechhHHHHHHHHHHHHhc
Q 018167 36 SGKSLNLYSAINQALHIALETDPRAYVFGEDVGF-GGVF-RCTTGLAD------RFGKSRVFNTPLCEQGIVGFAIGLAA 107 (360)
Q Consensus 36 ~~~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~-g~~~-~~~~~~~~------~~gp~r~i~~GIaE~~~vg~AaGlA~ 107 (360)
++.++++|++++++|.++++.+|+++++++|++. ++.+ +.+..|++ +| |+||||+||+||+|+++|+|||+
T Consensus 352 ~~~~~a~r~a~~~~L~~~~~~~p~v~~~~aDl~~s~~~~~~g~~~f~~~~~~~~~~-p~R~~d~gIaE~~~vg~a~GlA~ 430 (680)
T 1gpu_A 352 KDSAVATRKLSETVLEDVYNQLPELIGGSADLTPSNLTRWKEALDFQPPSSGSGNY-SGRYIRYGIREHAMGAIMNGISA 430 (680)
T ss_dssp TSCCBCHHHHHHHHHHHHTTTCTTEEEEESSCHHHHTCSCTTCCEECCTTTSSEET-TCCEEECCSCHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHhhCCCEEEEecccccccccccccccccccccccccCC-CCceecCCccHHHHHHHHHHHHh
Confidence 3567899999999999999999999999999972 2211 12346877 99 99999999999999999999999
Q ss_pred CC-Ce-eEEEecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCC-CchHHHHHcCCCCcEEEee
Q 018167 108 MG-NR-AIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIP 184 (360)
Q Consensus 108 ~G-~~-p~~~~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~H-s~~d~a~~r~iPn~~V~~P 184 (360)
+| ++ ||++ +|++|+.++++|||+ +|+++ +|+ .+++++.+...|++|+|| ++||+++||+||||+|++|
T Consensus 431 ~Gg~~~P~~~-~f~~F~~~~~~air~-~a~~~------lpv-v~v~t~~g~g~G~dG~tHq~~edla~lr~iP~l~V~~P 501 (680)
T 1gpu_A 431 FGANYKPYGG-TFLNFVSYAAGAVRL-SALSG------HPV-IWVATHDSIGVGEDGPTHQPIETLAHFRSLPNIQVWRP 501 (680)
T ss_dssp HCTTCEEEEE-EEHHHHGGGHHHHHH-HHHHT------CCC-EEEEECCSGGGCTTCTTTCCSSHHHHHHTSSSCEEECC
T ss_pred cCCCceEEEe-ehHHHHHHHHHHHHH-HHhcC------CCE-EEEEeCCccccCCCCCccCCHHHHHHhcCCCCCEEEec
Confidence 98 99 9998 599999999999986 88877 466 666666666677777777 5999999999999999999
Q ss_pred CCHHHHHHHHHHhHhC-CCCEEEeccccccccCcccCCCCCcc-cCCCceEEeeeC--CcEEEEEechhHHHHHHHHHHH
Q 018167 185 RSPRQAKGLLLSCIRD-PNPVVFFEPKWLYRLSVEEVPEDDYM-LPLSEAEVIREG--SDITLVGWGAQLSIMEQACLDA 260 (360)
Q Consensus 185 ~d~~e~~~~l~~a~~~-~~P~~i~~~k~l~r~~~~~v~~~~~~-~~~Gk~~vl~~G--~dv~Iia~G~~~~~al~Aa~~L 260 (360)
+|++|++.++++|+++ ++|+|||+|| +..+.++.+++. +++| ++++++| .|++|||+|++++.|++|++.|
T Consensus 502 ad~~e~~~~l~~A~~~~~~Pv~i~~~r----~~~~~~~~~~~~~~~~G-~~vl~~g~~~dvtiva~G~~v~~al~Aa~~L 576 (680)
T 1gpu_A 502 ADGNEVSAAYKNSLESKHTPSIIALSR----QNLPQLEGSSIESASKG-GYVLQDVANPDIILVATGSEVSLSVEAAKTL 576 (680)
T ss_dssp CSHHHHHHHHHHHHHCSSCCEEEECCS----SCBCCCTTCCHHHHTTS-CEEEECCSSCSEEEEECTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcEEEEecC----CCCCCCCCcchhhccCC-CEEEecCCCCCEEEEEEcHHHHHHHHHHHHH
Confidence 9999999999999997 9999997765 455555554444 7788 5889988 8999999999999999999999
Q ss_pred HhcCCCeeEEEeccccCCcHHH--HHHHHhcCC-eEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCCCccc
Q 018167 261 EKEGISCELIDLKTLIPWDKET--VEASVRKTG-RLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL 337 (360)
Q Consensus 261 ~~~Gi~v~Vi~~~~ikP~d~~~--l~~~~~~~~-~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~~~~~ 337 (360)
+++||+++|||++|++|||.+. +++++.+++ ++|+|||+.. +||++.+. +...+..+ +...+..+
T Consensus 577 ~~~Gi~~~Vvd~~~l~pld~~~~~~~~sv~~~~~~~v~vE~~~~-~g~~~~v~----------~~~gv~~f-~~~g~~~~ 644 (680)
T 1gpu_A 577 AAKNIKARVVSLPDFFTFDKQPLEYRLSVLPDNVPIMSVEVLAT-TCWGKYAH----------QSFGIDRF-GASGKAPE 644 (680)
T ss_dssp HTTTCCEEEEECSCHHHHHHSCHHHHHHHSCSSSCEEEECSSCS-TTGGGTCS----------EEECCCSC-CCCSCHHH
T ss_pred HhcCCCEEEEEcCCCCcchhhhHHHHHHHhccCCceEEEeCCcc-ccHHHhcC----------cceeeCcC-CCCCCHHH
Confidence 9999999999999999999985 667777664 6699999976 88887541 01111122 33445667
Q ss_pred cccccCCCCHHHHHHHHHHhhhC
Q 018167 338 VFEPFYMPTKNKILDAIKSTVNY 360 (360)
Q Consensus 338 ~~e~~gl~~~~~I~~~i~~~l~~ 360 (360)
+++++|+ |+++|+++|+++++|
T Consensus 645 l~~~~gl-~~~~I~~~i~~~l~~ 666 (680)
T 1gpu_A 645 VFKFFGF-TPEGVAERAQKTIAF 666 (680)
T ss_dssp HHHHTTC-SHHHHHHHHHHHHHH
T ss_pred HHHHHCc-CHHHHHHHHHHHHHh
Confidence 8999999 999999999998864
No 15
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=100.00 E-value=5.8e-53 Score=439.16 Aligned_cols=294 Identities=14% Similarity=0.140 Sum_probs=241.4
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCEEEEcCCCCC-C-CccccchhHH-HHhCCCcEEechhHHHHHHHHHHHHhcC-CCee
Q 018167 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVGF-G-GVFRCTTGLA-DRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRA 112 (360)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~-g-~~~~~~~~~~-~~~gp~r~i~~GIaE~~~vg~AaGlA~~-G~~p 112 (360)
+.++++|++++++|.++++.+|+++++++|++. + +.|+.+.+|. ++| |+||||+||+||+|+++|+|||+. |++|
T Consensus 352 ~~~~a~r~a~~~aL~~~~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~~-p~R~~d~GIaE~~~v~~a~GlA~~gG~~P 430 (663)
T 3kom_A 352 PVKVATRKASQMVLEVLCKNMPEMFGGSADLTGSNNTNWSGSVWLNNTQE-GANYLSYGVREFGMAAIMNGLSLYGGIKP 430 (663)
T ss_dssp CCCEEHHHHHHHHHHHHHHHCTTEEEEECCC--CCSCCCTTCCBTTTCST-TCCEEECCSCHHHHHHHHHHHHHHSSCEE
T ss_pred CcchhHHHHHHHHHHHHHhhCCCEEEEecccCCCCCcccccccccccccC-CCCeEecCccHHHHHHHHHHHHHcCCCEE
Confidence 566899999999999999999999999999972 2 2345566785 999 999999999999999999999999 9999
Q ss_pred EEEecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCC-CchHHHHHcCCCCcEEEeeCCHHHHH
Q 018167 113 IAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIPRSPRQAK 191 (360)
Q Consensus 113 ~~~~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~H-s~~d~a~~r~iPn~~V~~P~d~~e~~ 191 (360)
|+++ |++|+.++++|||+ +|+++ +|+ .+++++.+.++|++|+|| +++|+++||++|||+|++|+|++|++
T Consensus 431 ~~~t-f~~F~~~~~~~ir~-~a~~~------lpv-v~~~t~~g~g~G~dG~THq~~ed~a~lr~iPnl~V~~Pad~~e~~ 501 (663)
T 3kom_A 431 YGGT-FLVFSDYSRNAIRM-SALMK------QPV-VHVMSHDSIGLGEDGPTHQPIEHVPSLRLIPNLSVWRPADTIETM 501 (663)
T ss_dssp EEEE-EGGGHHHHHHHHHH-HHHTT------CCC-EEEEECCSGGGCTTCTTTCCSSHHHHHHTSTTCEEECCCSHHHHH
T ss_pred EEEe-hHHHHHHHHHHHHH-HHhcC------CCE-EEEEeCCccccCCCCCCcCCHHHHHHHhcCCCcEEEeeCCHHHHH
Confidence 9995 99999999999985 88877 466 666666666678777766 59999999999999999999999999
Q ss_pred HHHHHhHh-CCCCEEEeccccccccCcccCCCCC---cccCCCceEEeee--CCcEEEEEechhHHHHHHHHHHHHhcCC
Q 018167 192 GLLLSCIR-DPNPVVFFEPKWLYRLSVEEVPEDD---YMLPLSEAEVIRE--GSDITLVGWGAQLSIMEQACLDAEKEGI 265 (360)
Q Consensus 192 ~~l~~a~~-~~~P~~i~~~k~l~r~~~~~v~~~~---~~~~~Gk~~vl~~--G~dv~Iia~G~~~~~al~Aa~~L~~~Gi 265 (360)
.++++|++ +++|+|||++| +..|.++..+ +.++.|+ +++++ |.|++|||+|++++.|++|+++|+++||
T Consensus 502 ~~l~~A~~~~~~Pv~ir~~r----~~~p~~~~~~~~~~~~~~G~-~vl~~~~g~dvtiia~G~~v~~al~Aa~~L~~~Gi 576 (663)
T 3kom_A 502 IAWKEAVKSKDTPSVMVLTR----QNLMPVVQTQHQVANIARGG-YLVKDNPDAKLTIVATGSEVELAVKVANEFEKKGI 576 (663)
T ss_dssp HHHHHHHHCSSCCEEEECCS----SEECCCCCCHHHHHHHTTTC-EEEECCTTCSCEEEECTTHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCEEEEccC----ccCCCcCccccchhcccCce-EEEEecCCCCEEEEEecHHHHHHHHHHHHHHhcCC
Confidence 99999999 69999996654 5555554433 3567774 67787 7999999999999999999999999999
Q ss_pred CeeEEEeccccCCcHHH--HHHHHhcC-CeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEe----cCCCCcccc
Q 018167 266 SCELIDLKTLIPWDKET--VEASVRKT-GRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVC----GLDTPFPLV 338 (360)
Q Consensus 266 ~v~Vi~~~~ikP~d~~~--l~~~~~~~-~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~----~~~~~~~~~ 338 (360)
+++|||++|++|||.++ +++++.++ ..+|++|++. ..||.+.+. ++ .-..++ +...+.+++
T Consensus 577 ~~~Vi~~~si~p~D~~~~~~~~~vl~~~~~~v~vE~~~-~~g~~~~~g---------G~--~~~~igid~Fg~sg~~~~l 644 (663)
T 3kom_A 577 KLNVASIPCVEVFATQAHEYKKTVIKDDIPAVFVEMAQ-PDMWYKYMP---------KA--GGEVKGIYSFGESAPAEDL 644 (663)
T ss_dssp CCEEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSC-CGGGGGGCC---------TT--CEEEECCCSCCCSSCHHHH
T ss_pred CeEEEEcCcCCcccccHHHHHHHhcCCCCeEEEEecCC-cccHHHHhc---------cc--CCcEEEecCCcCCCCHHHH
Confidence 99999999999999987 56666655 4688898864 566665331 01 112332 333455688
Q ss_pred ccccCCCCHHHHHHHHHHhh
Q 018167 339 FEPFYMPTKNKILDAIKSTV 358 (360)
Q Consensus 339 ~e~~gl~~~~~I~~~i~~~l 358 (360)
+++||| |+++|++++++++
T Consensus 645 ~~~~Gl-t~e~I~~~~~~~~ 663 (663)
T 3kom_A 645 FKRFGF-TVENISNIVAKYV 663 (663)
T ss_dssp HHHHTC-SHHHHHHHHTTTC
T ss_pred HHHHCc-CHHHHHHHHHhhC
Confidence 999999 9999999998764
No 16
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=100.00 E-value=1.2e-52 Score=438.93 Aligned_cols=299 Identities=13% Similarity=0.140 Sum_probs=244.9
Q ss_pred CCCcccHHHHHHHHHHHHHhcCCCEEEEcCCCC-CCCc-cccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcC-CCee
Q 018167 36 SGKSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGV-FRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRA 112 (360)
Q Consensus 36 ~~~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~-~g~~-~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~-G~~p 112 (360)
+++++++|++++++|.++++.+|+++++++|++ +++. ++.+..|+++| |+||||+||+||+|+++|+|||+. |++|
T Consensus 351 ~~~~~~~r~a~~~~L~~l~~~~p~v~~~~aDl~~s~~~~~~~~~~f~~~~-p~R~id~GIaE~~~v~~a~GlA~~gG~~P 429 (669)
T 2r8o_A 351 NPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDA-AGNYIHYGVREFGMTAIANGISLHGGFLP 429 (669)
T ss_dssp SCCCEEHHHHHHHHHHHHTTTCTTEEEEESSCHHHHTCCCTTCCBTTTCT-TCSEEECCSCHHHHHHHHHHHHHHSSCEE
T ss_pred CCccHHHHHHHHHHHHHHHhhCCCeEEecCcccccccccccccccccccC-CCCeeecchhHHHHHHHHHHHHHcCCCeE
Confidence 356789999999999999999999999999997 2222 23456899999 999999999999999999999999 8999
Q ss_pred EEEecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCCC-chHHHHHcCCCCcEEEeeCCHHHHH
Q 018167 113 IAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHS-QSPEAFFCHVPGLKVVIPRSPRQAK 191 (360)
Q Consensus 113 ~~~~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~Hs-~~d~a~~r~iPn~~V~~P~d~~e~~ 191 (360)
|+. +|++|+.++++|||+ +|+++ +|+ .+++++.+...|++|+||+ ++|+++||++|||+|++|+|++|++
T Consensus 430 ~~~-tf~~F~~~~~~~ir~-~a~~~------lpv-v~~~t~~g~~~G~dG~tHq~~edla~lr~iP~l~V~~Pad~~E~~ 500 (669)
T 2r8o_A 430 YTS-TFLMFVEYARNAVRM-AALMK------QRQ-VMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESA 500 (669)
T ss_dssp EEE-EEGGGGGTTHHHHHH-HHHTT------CCC-EEEEECCSGGGCTTCTTTCCSSHHHHHHTSTTCEEECCSSHHHHH
T ss_pred EEe-ehHHHHHHHHHHHHH-HHhcC------CCE-EEEEeCCCcCcCCCCCccCCHHHHHHhcCCCCCEEEecCCHHHHH
Confidence 998 699999999999997 78777 466 6666666666777887775 9999999999999999999999999
Q ss_pred HHHHHhHhC-CCCEEEeccccccccCcccCCCCCc---ccCCCceEEeee--C-CcEEEEEechhHHHHHHHHHHHHhcC
Q 018167 192 GLLLSCIRD-PNPVVFFEPKWLYRLSVEEVPEDDY---MLPLSEAEVIRE--G-SDITLVGWGAQLSIMEQACLDAEKEG 264 (360)
Q Consensus 192 ~~l~~a~~~-~~P~~i~~~k~l~r~~~~~v~~~~~---~~~~Gk~~vl~~--G-~dv~Iia~G~~~~~al~Aa~~L~~~G 264 (360)
.++++|++. ++|+|||++|. ..+.++.+.+ .+++|+ +++++ | .|++||++|+++..|++|++.|+++|
T Consensus 501 ~~l~~a~~~~~~Pv~i~~~r~----~~~~~~~~~~~~~~~~~G~-~vl~~~~g~~dv~iva~G~~v~~al~Aa~~L~~~G 575 (669)
T 2r8o_A 501 VAWKYGVERQDGPTALILSRQ----NLAQQERTEEQLANIARGG-YVLKDCAGQPELIFIATGSEVELAVAAYEKLTAEG 575 (669)
T ss_dssp HHHHHHHHCSSSCEEEECCSS----EECCCCCCHHHHHHGGGSC-EEEECCSSSCSEEEEECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCcEEEEeCCC----CCCCCCCccchhhhccCCC-EEEeccCCCCCEEEEEECHHHHHHHHHHHHHHhcC
Confidence 999999997 99999977764 3344544332 267784 78888 8 99999999999999999999999999
Q ss_pred CCeeEEEeccccCCcHHH--HHHHHhcC--CeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCCCcccccc
Q 018167 265 ISCELIDLKTLIPWDKET--VEASVRKT--GRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLVFE 340 (360)
Q Consensus 265 i~v~Vi~~~~ikP~d~~~--l~~~~~~~--~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~~~~~~~e 340 (360)
|+++|||++|++|||.+. +++++.++ +++|++|++.. +||++. +.+.+ ....+.++ +...+..++++
T Consensus 576 i~~~Vv~~~~~~pld~~~~~~~~~v~~~~~~~vv~vE~~~~-~g~~~~----~~~~~---~~ig~d~f-g~sg~~~~l~~ 646 (669)
T 2r8o_A 576 VKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIA-DYWYKY----VGLNG---AIVGMTTF-GESAPAELLFE 646 (669)
T ss_dssp CCEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEEEEEEG-GGGHHH----HTTSS---EEEEECSC-CCSSCHHHHHH
T ss_pred CCeEEEEeccCCccccchHHHHHHhccccCceEEEEeCCch-hhHHHH----hcCCC---eEEEcCCC-CCcCCHHHHHH
Confidence 999999999999999885 44444444 67999999976 788763 33321 00111122 33345568899
Q ss_pred ccCCCCHHHHHHHHHHhhh
Q 018167 341 PFYMPTKNKILDAIKSTVN 359 (360)
Q Consensus 341 ~~gl~~~~~I~~~i~~~l~ 359 (360)
+||| |+++|++++++++.
T Consensus 647 ~~Gl-~~~~I~~~~~~~~~ 664 (669)
T 2r8o_A 647 EFGF-TVDNVVAKAKELLH 664 (669)
T ss_dssp HTTC-SHHHHHHHHHHHC-
T ss_pred HhCC-CHHHHHHHHHHHHh
Confidence 9999 99999999999875
No 17
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=100.00 E-value=1.7e-51 Score=430.35 Aligned_cols=292 Identities=15% Similarity=0.165 Sum_probs=244.0
Q ss_pred CCCcccHHHHHHHHHHHHHhcCCCEEEEcCCCCC-CCc-cccchhHHH-HhCCCcEEechhHHHHHHHHHHHHhcCC--C
Q 018167 36 SGKSLNLYSAINQALHIALETDPRAYVFGEDVGF-GGV-FRCTTGLAD-RFGKSRVFNTPLCEQGIVGFAIGLAAMG--N 110 (360)
Q Consensus 36 ~~~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~-g~~-~~~~~~~~~-~~gp~r~i~~GIaE~~~vg~AaGlA~~G--~ 110 (360)
++.++++|++++++|.++++.+|+++++++|++. ++. .+.+..|++ +| |+||||+||+||+|+++|+|||++| +
T Consensus 362 ~~~~~a~r~a~~~~L~~i~~~~p~v~~~~aDl~~s~~~~~~g~~~f~~~~~-~~R~id~gIaE~~~v~~a~GlA~~G~~~ 440 (675)
T 1itz_A 362 ESPGDATRNLSQQCLNALANVVPGLIGGSADLASSNMTLLKMFGDFQKDTA-EERNVRFGVREHGMGAICNGIALHSPGF 440 (675)
T ss_dssp TSCCBCHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCCTTCCBCCTTCT-TCCBCCCCSCHHHHHHHHHHHHTTCTTC
T ss_pred CCcchHHHHHHHHHHHHHHHhCCCEEEEeccccccccccccccccccccCC-CCCeEeecccHHHHHHHHHHHHhcCCCC
Confidence 4567899999999999999999999999999972 111 112335886 99 9999999999999999999999999 9
Q ss_pred eeEEEecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCC-CchHHHHHcCCCCcEEEeeCCHHH
Q 018167 111 RAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIPRSPRQ 189 (360)
Q Consensus 111 ~p~~~~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~H-s~~d~a~~r~iPn~~V~~P~d~~e 189 (360)
+||+++ |++|+.++++|||+ +|+++ +|+ .+++++.+...|++|+|| +++|+++||++|||+|++|+|++|
T Consensus 441 ~P~~~t-~~~F~~~~~~~ir~-~a~~~------lpv-v~~~t~~g~g~G~dG~tHq~~edla~lr~iP~l~V~~Pad~~e 511 (675)
T 1itz_A 441 VPYCAT-FFVFTDYMRGAMRI-SALSE------AGV-IYVMTHDSIGLGEDGPTHQPIEHLVSFRAMPNILMLRPADGNE 511 (675)
T ss_dssp EEEEEE-EGGGHHHHHHHHHH-HHHHT------CCC-EEEEECCSGGGCTTCTTTCCSSHHHHHHSSSSCEEECCCSHHH
T ss_pred EEEEEE-HHHHHHHHHHHHHH-HHhcC------CCE-EEEEECCccccCCCCCCcCcHHHHHHhccCCCeEEEECCCHHH
Confidence 999995 99999999999986 78877 466 666666666677777777 599999999999999999999999
Q ss_pred HHHHHHHhHhC-CCCEEEeccccccccCcccCCCCCc-ccCCCceEEeee---C--CcEEEEEechhHHHHHHHHHHHHh
Q 018167 190 AKGLLLSCIRD-PNPVVFFEPKWLYRLSVEEVPEDDY-MLPLSEAEVIRE---G--SDITLVGWGAQLSIMEQACLDAEK 262 (360)
Q Consensus 190 ~~~~l~~a~~~-~~P~~i~~~k~l~r~~~~~v~~~~~-~~~~Gk~~vl~~---G--~dv~Iia~G~~~~~al~Aa~~L~~ 262 (360)
++.++++|++. ++|+|||++| +..|.++.+++ .+++| ++++++ | .|++||++|++++.|++|++.|++
T Consensus 512 ~~~~l~~a~~~~~~Pv~i~~~r----~~~p~~~~~~~~~~~~G-a~vl~~~~~G~~~dv~iva~G~~v~~al~Aa~~L~~ 586 (675)
T 1itz_A 512 TAGAYKVAVLNRKRPSILALSR----QKLPHLPGTSIEGVEKG-GYTISDNSTGNKPDLIVMGTGSELEIAAKAADELRK 586 (675)
T ss_dssp HHHHHHHHHHCTTSCEEEEECS----SCBCCCTTCCHHHHTTS-SEEEEECCSTTCCSEEEEECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEecC----CCCCCCCCccccccccC-CEEEecccCCCCCCEEEEEECHHHHHHHHHHHHHHh
Confidence 99999999997 9999997665 45565555444 57889 688888 8 899999999999999999999999
Q ss_pred cCCCeeEEEeccccCCcHHH--HHHHHhcC--CeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCC-----
Q 018167 263 EGISCELIDLKTLIPWDKET--VEASVRKT--GRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDT----- 333 (360)
Q Consensus 263 ~Gi~v~Vi~~~~ikP~d~~~--l~~~~~~~--~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~----- 333 (360)
+||+++|||++|++|||.++ +++++.++ +++||+||+.. +||++.+ ..+..+++. |.
T Consensus 587 ~Gi~v~Vv~~~~~~pld~~~~~~~~~v~~~~~~~vv~vE~~~~-~G~~~~~------------~~~~~~ig~-d~fg~sg 652 (675)
T 1itz_A 587 EGKTVRVVSFVSWELFDEQSDEYKESVLPAAVTARISIEAGST-LGWQKYV------------GAQGKAIGI-DKFGASA 652 (675)
T ss_dssp TTCCEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEECSSCC-TTTHHHH------------CSSCEEECC-CSCCCSS
T ss_pred cCCcEEEEEeccCcccccchHHHHHHHhccCCceEEEEECCcc-ccHHHhc------------CCCceEEEe-CCCCCCC
Confidence 99999999999999999986 55666665 67999999976 8888632 124456643 43
Q ss_pred CccccccccCCCCHHHHHHHHHHh
Q 018167 334 PFPLVFEPFYMPTKNKILDAIKST 357 (360)
Q Consensus 334 ~~~~~~e~~gl~~~~~I~~~i~~~ 357 (360)
+..+++++||+ |+++|+++|+++
T Consensus 653 ~~~~l~~~~gl-~~~~I~~~i~~~ 675 (675)
T 1itz_A 653 PAGTIYKEYGI-TVESIIAAAKSF 675 (675)
T ss_dssp CHHHHHHHHTC-SHHHHHHHHTTC
T ss_pred CHHHHHHHHCc-CHHHHHHHHHhC
Confidence 33468999999 999999998753
No 18
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=100.00 E-value=1.5e-51 Score=439.64 Aligned_cols=341 Identities=18% Similarity=0.292 Sum_probs=277.6
Q ss_pred hhHHHHhhhc--ccccccchhhHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHhcCCCEEEEcCCCCCC-----------
Q 018167 4 GLRRFVGSLS--RRNLSTACANKQLIQQHDGGVGSGKSLNLYSAINQALHIALETDPRAYVFGEDVGFG----------- 70 (360)
Q Consensus 4 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g----------- 70 (360)
.|+++++.+. +.+|+.|+..++.++.+.+...++..++|..+++.+|.+++++|++|+++++|++.|
T Consensus 553 ~l~~i~~~~~~~p~~~~~~~~v~~~~~~R~~~~~~~~~~dw~~~e~~al~~l~~~~~~V~~~g~Dv~~gTfs~rh~v~~d 632 (933)
T 2jgd_A 553 RLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHN 632 (933)
T ss_dssp HHHHHHHHTTCCCTTSCCCHHHHHHHHHHHHHHTTSSCBCHHHHHHHHHHHHHTTTCCEEEEETTTTTCTTSCCCCSEEC
T ss_pred HHHHHHhhhcCCCCCCcccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHhcCCCEEEECCccCCcchhhhhhhccc
Confidence 4566766543 489999999999998877666667779999999999999999999999999999864
Q ss_pred ----CccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcCCCe--eEEEecCcccHH---HHHHHHHHHH-Hhccccc
Q 018167 71 ----GVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNR--AIAEIQFADYIF---PAFDQIVNEA-AKFRYRS 140 (360)
Q Consensus 71 ----~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~G~~--p~~~~~f~~F~~---ra~dQi~~~~-a~~~~~~ 140 (360)
+.|..+..|+++|||+||+|+|||||+++|+|+|+|+.|.+ |+++++|++|++ |++|||++++ ++...
T Consensus 633 ~~~g~~~~~l~~l~~~~gp~rv~ds~IaE~~~vg~a~G~A~~G~~~lpv~e~qf~dF~~~AQra~DQii~~~~ak~~~-- 710 (933)
T 2jgd_A 633 QSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGR-- 710 (933)
T ss_dssp SSSSCEECGGGCSCTTCCCEEEECCCSCHHHHHHHHHHHHHHCTTSEEEEEC-CGGGGGGGHHHHHHTTTTHHHHHCC--
T ss_pred ccCCceeechHHHHHHcCCCeEEECCcCHHHHHHHHHHHHhcCCCCCCEEEEEEhhhhcccHHHHHHHHHHHHHHHcc--
Confidence 34456889999999999999999999999999999999998 999878999995 9999999988 65321
Q ss_pred CCCccccceEEEcCCCCCCCCCCCCCchHHHH--HcCCCCcEEEeeCCHHHHHHHHHHhH-hC-CCCEEEeccccccccC
Q 018167 141 GNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAF--FCHVPGLKVVIPRSPRQAKGLLLSCI-RD-PNPVVFFEPKWLYRLS 216 (360)
Q Consensus 141 ~~~~~v~~~v~~~~~g~~g~~g~~Hs~~d~a~--~r~iPn~~V~~P~d~~e~~~~l~~a~-~~-~~P~~i~~~k~l~r~~ 216 (360)
.. +++++.+.|+.|.|++||++.++.+ ++++|||+|++|+|+.|++.+|++++ +. ++|++||+||+++|.+
T Consensus 711 ----~~-~vv~~l~~G~~g~G~~Hss~~~E~~l~~~~~pnm~V~~Pst~~e~~~lLr~a~~~~~~~Pvii~~pk~l~r~~ 785 (933)
T 2jgd_A 711 ----MC-GLVMLLPHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHP 785 (933)
T ss_dssp ----CC-CCEEEEECCCSSSCTTSSCCCHHHHHHTCCTTCCEEECCCSHHHHHHHHHHHHHSSCCCCEEEEECSGGGGCT
T ss_pred ----CC-CEEEEEeCCCCCCCcccccchHHHHHHHhCCCCeEEEecCCHHHHHHHHHHHHHhcCCCcEEEEecchhccCC
Confidence 23 5566666676676666777545554 56779999999999999999999985 64 8999999999999864
Q ss_pred cc-----cCCCCCcccCCCceEEeeeCCcE--EEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhc
Q 018167 217 VE-----EVPEDDYMLPLSEAEVIREGSDI--TLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRK 289 (360)
Q Consensus 217 ~~-----~v~~~~~~~~~Gk~~vl~~G~dv--~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~ 289 (360)
.. +++++.+.+++|++.+++ |+|+ +|+++|.+...+++|++.|+++ +++|||+++|+|||.++|.+++++
T Consensus 786 ~~~~~~~~~~~~~f~~~ig~~~~~~-g~dV~~vI~~~G~v~~~l~aa~~~l~~~--~v~VIdl~~l~Pld~e~i~~~~~k 862 (933)
T 2jgd_A 786 LAVSSLEELANGTFLPAIGEIDELD-PKGVKRVVMCSGKVYYDLLEQRRKNNQH--DVAIVRIEQLYPFPHKAMQEVLQQ 862 (933)
T ss_dssp TCCBCHHHHHHCCCCSEECCCSCCC-GGGCCEEEEECTTHHHHHHHHHHHTTCC--SEEEEEECEEESCCHHHHHHHHGG
T ss_pred CCcCCccccCCCceeecCCcceEee-cCcceEEEEEchHHHHHHHHHHHHcccC--CeEEEEeeccCCCCHHHHHHHHHh
Confidence 32 122345677889998888 8999 6777777666666776888765 999999999999999999999999
Q ss_pred CC---eEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCCCccc-cccccCCCCHHHHHHHHHH
Q 018167 290 TG---RLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL-VFEPFYMPTKNKILDAIKS 356 (360)
Q Consensus 290 ~~---~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~~~~~-~~e~~gl~~~~~I~~~i~~ 356 (360)
++ +|||+||+...||+|+.|++.+.+..+. ..++++++.++.+.|. -+++..+|..+.|++++..
T Consensus 863 ~~~~~~vv~veE~~~~gG~g~~v~~~l~~~~~~--~~~v~~vg~~d~~~pa~g~~~~h~~~~~~i~~~a~~ 931 (933)
T 2jgd_A 863 FAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPF--GASLRYAGRPASASPAVGHMSVHQKQQQDLVNDALN 931 (933)
T ss_dssp GTTCCEEEEEEEEETTSTTHHHHHHHHHTTSCT--TCEEEEEEECCCSSSSCSCHHHHHHHHHHHHHHHHC
T ss_pred CCCCceEEEEecCCCcCCHHHHHHHHHHHhccc--CCceEEEecCCcCCCCcCCHHHHHHHHHHHHHHHhc
Confidence 98 8999999999999999999999886431 3689999887776653 2444445578888877653
No 19
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=100.00 E-value=8.2e-52 Score=432.36 Aligned_cols=290 Identities=14% Similarity=0.142 Sum_probs=244.6
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCEEEEcCCCCC-CCccc-c--chhHHH-HhCCCcEEechhHHHHHHHHHHHHhcC-CC
Q 018167 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFR-C--TTGLAD-RFGKSRVFNTPLCEQGIVGFAIGLAAM-GN 110 (360)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~-g~~~~-~--~~~~~~-~~gp~r~i~~GIaE~~~vg~AaGlA~~-G~ 110 (360)
+.++++|++++++|.++++++|+++++++|++. ++.+. . +..|++ +| |+||||+||+||+|+++|+|||++ |+
T Consensus 349 ~~~~a~r~a~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~~~f~~~~~-~~R~id~GIaE~~~~~~a~GlA~~GG~ 427 (673)
T 1r9j_A 349 SSAIATRKASENCLAVLFPAIPALMGGSADLTPSNLTRPASANLVDFSSSSK-EGRYIRFGVREHAMCAILNGLDAHDGI 427 (673)
T ss_dssp CSCEEHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCSCGGGCCCBCBTTBT-TCCEEECCSCHHHHHHHHHHHHHHSSC
T ss_pred ccchHHHHHHHHHHHHHHhhCCCEEEEeccccccccccccCcccccccccCC-CCCeEecCccHHHHHHHHHHHHhcCCC
Confidence 457899999999999999999999999999972 22210 1 334887 99 999999999999999999999999 69
Q ss_pred eeEEEecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCC-CchHHHHHcCCCCcEEEeeCCHHH
Q 018167 111 RAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-SQSPEAFFCHVPGLKVVIPRSPRQ 189 (360)
Q Consensus 111 ~p~~~~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~H-s~~d~a~~r~iPn~~V~~P~d~~e 189 (360)
+||+++ |++|+.++++|||+ +|+++ +|+ .+++++.+...|++|+|| +++|+++||+||||+|++|+|++|
T Consensus 428 ~P~~~~-~~~F~~~~~~~ir~-~a~~~------~pv-v~~~t~~g~g~G~dG~tHq~~edla~lr~iP~l~V~~Pad~~e 498 (673)
T 1r9j_A 428 IPFGGT-FLNFIGYALGAVRL-AAISH------HRV-IYVATHDSIGVGEDGPTHQPVELVAALRAMPNLQVIRPSDQTE 498 (673)
T ss_dssp EEEEEE-EGGGGGGGHHHHHH-HHHHT------CCC-EEEEECCSGGGCTTCTTTCCSSHHHHHHHSTTCEEECCSSHHH
T ss_pred EEEEEe-hHHHHHHHHHHHHH-HHhcC------CCE-EEEEECCccCcCCCCcccCCHHHHHHHcCCCCCEEEeCCCHHH
Confidence 999995 99999999999997 78877 466 666555665678788777 599999999999999999999999
Q ss_pred HHHHHHHhHhC-CCCEEEeccccccccCcccCCCCCc-ccCCCceEEeeeC--CcEEEEEechhHHHHHHHHHHHHhcCC
Q 018167 190 AKGLLLSCIRD-PNPVVFFEPKWLYRLSVEEVPEDDY-MLPLSEAEVIREG--SDITLVGWGAQLSIMEQACLDAEKEGI 265 (360)
Q Consensus 190 ~~~~l~~a~~~-~~P~~i~~~k~l~r~~~~~v~~~~~-~~~~Gk~~vl~~G--~dv~Iia~G~~~~~al~Aa~~L~~~Gi 265 (360)
++.++++|++. ++|+|||++| +..+.++.+.+ .+++| ++++++| .|++||++|+++..|++|++.|+++ |
T Consensus 499 ~~~~l~~a~~~~~~Pv~i~~~r----~~~~~~~~~~~~~~~~G-a~vl~~g~~~dv~lia~G~~v~~al~Aa~~L~~~-i 572 (673)
T 1r9j_A 499 TSGAWAVALSSIHTPTVLCLSR----QNTEPQSGSSIEGVRHG-AYSVVDVPDLQLVIVASGSEVSLAVDAAKALSGE-L 572 (673)
T ss_dssp HHHHHHHHHHCTTCCEEEECCS----SEECCCTTCCHHHHHTS-CEEEECCTTCSEEEEECGGGHHHHHHHHHHHTTT-C
T ss_pred HHHHHHHHHHhCCCeEEEEEcC----CCCCCCCCcccccccCC-CEEEeeCCCCCEEEEEechhHHHHHHHHHHHHhc-C
Confidence 99999999997 9999997765 44455554444 57888 6889988 8999999999999999999999999 9
Q ss_pred CeeEEEeccccCCcHHH---HHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEec----CCCCcccc
Q 018167 266 SCELIDLKTLIPWDKET---VEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCG----LDTPFPLV 338 (360)
Q Consensus 266 ~v~Vi~~~~ikP~d~~~---l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~----~~~~~~~~ 338 (360)
+++|||++|++|||+++ +.+++++++++|++|++.. +||++.+ ++. ++. ...+..++
T Consensus 573 ~~~Vv~~~sl~pld~~~~~~i~~~~~~~~~vv~vE~~~~-~g~~~~v--------------~~~-~g~d~f~~sg~~~~L 636 (673)
T 1r9j_A 573 RVRVVSMPCQELFDAQPDTYRQAVLPAGVPVVSVEAYVS-FGWEKYS--------------HAH-VGMSGFGASAPAGVL 636 (673)
T ss_dssp CEEEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSCC-TTGGGTC--------------SEE-ESCSSCCCSSCHHHH
T ss_pred CEEEEeCCCCchhhcccHHHHHHHhccCCeEEEEeCCCc-cchHHhc--------------Cce-EEeccCCCCCCHHHH
Confidence 99999999999999985 8888888889999999976 8887643 122 432 22344578
Q ss_pred ccccCCCCHHHHHHHHHHhhh
Q 018167 339 FEPFYMPTKNKILDAIKSTVN 359 (360)
Q Consensus 339 ~e~~gl~~~~~I~~~i~~~l~ 359 (360)
++++|+ |+++|+++|+++++
T Consensus 637 ~~~~g~-~~~~I~~~i~~~l~ 656 (673)
T 1r9j_A 637 YKKFGI-TVEEVVRTGRELAK 656 (673)
T ss_dssp HHHTTC-SHHHHHHHHHHHHH
T ss_pred HHHHCc-CHHHHHHHHHHHHH
Confidence 999999 99999999999875
No 20
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=100.00 E-value=2.8e-51 Score=427.32 Aligned_cols=289 Identities=17% Similarity=0.155 Sum_probs=240.8
Q ss_pred CCcccHHHHHHHHHHHHHhcCCCEEEEcCCCCC-CCcc-ccchhHHH-HhCCCcEEechhHHHHHHHHHHHHhcCC-Cee
Q 018167 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVGF-GGVF-RCTTGLAD-RFGKSRVFNTPLCEQGIVGFAIGLAAMG-NRA 112 (360)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~-g~~~-~~~~~~~~-~~gp~r~i~~GIaE~~~vg~AaGlA~~G-~~p 112 (360)
++++++|++++++|.++++.+|+++++++|++. ++.+ +.+..|++ +| |+||||+||+||+|+++|+|||++| ++|
T Consensus 346 ~~~~~~r~a~~~~L~~~~~~~p~~~~~~aDl~~s~~~~~~~~~~f~~~~~-p~R~i~~gIaE~~~~~~a~GlA~~Gg~~P 424 (651)
T 2e6k_A 346 DKPIATRAASGRALNLLAPRLPELLGGSADLTPSNNTKAEGMEDFSRANP-LGRYLHFGVREHAMGAILNGLNLHGGYRA 424 (651)
T ss_dssp CSCBCHHHHHHHHHHHHGGGCTTEEEEESSCHHHHTCSCTTCCBCBTTBT-TCCEEECCSCHHHHHHHHHHHHHHSSCEE
T ss_pred CccHHHHHHHHHHHHHHHhhCCCEEEEeCccccccccccccccccCccCC-CCceEecCcCHHHHHHHHHHHHHcCCCEE
Confidence 457899999999999999999999999999972 1111 13567887 99 9999999999999999999999998 999
Q ss_pred EEEecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCCC-chHHHHHcCCCCcEEEeeCCHHHHH
Q 018167 113 IAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHS-QSPEAFFCHVPGLKVVIPRSPRQAK 191 (360)
Q Consensus 113 ~~~~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~Hs-~~d~a~~r~iPn~~V~~P~d~~e~~ 191 (360)
|++ +|+.|+.++++|||. +|+++ +|+ .+++++.+...|++|+||+ +||+++||++|||+|++|+|++|++
T Consensus 425 ~~~-t~~~F~~~~~~air~-~a~~~------lpv-v~~~t~~g~g~G~dG~tHq~~edla~lr~iP~l~V~~Pad~~E~~ 495 (651)
T 2e6k_A 425 YGG-TFLVFSDYMRPAIRL-AALMG------VPT-VFVFTHDSIALGEDGPTHQPVEHLMSLRAMPNLFVIRPADAYETF 495 (651)
T ss_dssp EEE-EEGGGGGGSHHHHHH-HHHHT------CCC-EEEEECCSGGGCTTCTTTCCSSHHHHHHTSTTCEEECCSSHHHHH
T ss_pred EEE-eHHHHHHHHHHHHHH-HHhcC------CCE-EEEEECCccccCCCcCccccHHHHHHhcCCCCcEEEecCCHHHHH
Confidence 999 599998888999885 78877 466 6666666666787888775 9999999999999999999999999
Q ss_pred HHHHHhHhC-CCCEEEeccccccccCcccCCCCCc-ccCCCceEEeeeC--CcEEEEEechhHHHHHHHHHHHHhcCCCe
Q 018167 192 GLLLSCIRD-PNPVVFFEPKWLYRLSVEEVPEDDY-MLPLSEAEVIREG--SDITLVGWGAQLSIMEQACLDAEKEGISC 267 (360)
Q Consensus 192 ~~l~~a~~~-~~P~~i~~~k~l~r~~~~~v~~~~~-~~~~Gk~~vl~~G--~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v 267 (360)
.++++|++. ++|+|||+||. ..+.++.+++ .++.| ++++++| .|++||++|+++..|++|++.|+++||++
T Consensus 496 ~~l~~A~~~~~~Pv~i~~~r~----~~~~~~~~~~~~~~~G-~~vl~~g~~~dv~iva~G~~v~~al~Aa~~L~~~Gi~~ 570 (651)
T 2e6k_A 496 YAWLVALRRKEGPTALVLTRQ----AVPLLSPEKARGLLRG-GYVLEDVEEPQGVLVATGSEVHLALRAQALLREKGVRV 570 (651)
T ss_dssp HHHHHHHHCCSSCEEEECCSS----CBCCCCHHHHGGGGGS-SEEEECCSSCSEEEEECTTHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHcCCCCEEEEEeCC----CCCCCCcchhhhhcCC-CEEEeeCCCCCEEEEEECHHHHHHHHHHHHHHhcCCcE
Confidence 999999997 89999977764 3444443222 46777 5788988 89999999999999999999999999999
Q ss_pred eEEEeccccCCcHHH--HHHHHhcC-CeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCC-----Cccccc
Q 018167 268 ELIDLKTLIPWDKET--VEASVRKT-GRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDT-----PFPLVF 339 (360)
Q Consensus 268 ~Vi~~~~ikP~d~~~--l~~~~~~~-~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~-----~~~~~~ 339 (360)
+|||++|++|||.+. +++++.++ +++||+|++.. +||++.+ + .+++. |. +..+++
T Consensus 571 ~Vv~~~~~~p~d~~~~~~~~~v~~~~~~vv~vE~~~~-~G~~~~v--------------~-~~ig~-d~f~~sg~~~~l~ 633 (651)
T 2e6k_A 571 RVVSLPSFELFAAQPEAYRKEVLPPGLPVVAVEAGAS-LGWERYA--------------H-KVVAL-DRFGASAPYPEVY 633 (651)
T ss_dssp EEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSCC-TTGGGTC--------------S-EEECC-CSCCCSCCTTHHH
T ss_pred EEEecCcCCccccccHHHHHHHhCcCCeEEEEeCCcc-CchHHhC--------------C-CEEEe-CCCCCCCCHHHHH
Confidence 999999999999985 55555554 78999999976 8887643 2 44533 43 335689
Q ss_pred cccCCCCHHHHHHHHHHhh
Q 018167 340 EPFYMPTKNKILDAIKSTV 358 (360)
Q Consensus 340 e~~gl~~~~~I~~~i~~~l 358 (360)
+++|+ |+++|+++|++++
T Consensus 634 ~~~gl-~~~~I~~~i~~~l 651 (651)
T 2e6k_A 634 ERLGF-TPERVAEAFLSLV 651 (651)
T ss_dssp HHTTC-CHHHHHHHHHTTC
T ss_pred HHhCC-CHHHHHHHHHHhC
Confidence 99999 9999999998864
No 21
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=100.00 E-value=1.5e-49 Score=422.24 Aligned_cols=322 Identities=18% Similarity=0.210 Sum_probs=257.5
Q ss_pred hhHHHHhhh--cccccccchhhHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHhcCCCEEEEcCCCCC------------
Q 018167 4 GLRRFVGSL--SRRNLSTACANKQLIQQHDGGVGSGKSLNLYSAINQALHIALETDPRAYVFGEDVGF------------ 69 (360)
Q Consensus 4 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~------------ 69 (360)
-|+++++.+ .+.+|+.|+..++.++.+..-+.. ..++|.-+-.-+..+++++|++|+++++|++.
T Consensus 480 ~l~~~~~~~~~~p~~~~~~~~v~~~~~~R~~m~~~-~~i~~a~~e~la~~~l~~~~~~V~~~G~Dv~~~Tfs~rh~v~~d 558 (868)
T 2yic_A 480 MLQRIGDAHLALPEGFTVHPRVRPVLEKRREMAYE-GRIDWAFAELLALGSLIAEGKLVRLSGQDTQRGTFTQRHAVIVD 558 (868)
T ss_dssp HHHHHHHHTTCCCTTCCCCTTTHHHHHHHHHHHHH-CCBCHHHHHHHHHHHHHHTTCEEEEEETTTTTCTTSCCCSSEEC
T ss_pred HHHHHHHhhccCCcccccchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHHHHHhcCCCEEEEcCcCCccchhhcchhccc
Confidence 355665554 347888999888877665443332 33665555555567899999999999999985
Q ss_pred ---CCccccchhH------HHHhCCCcEEechhHHHHHHHHHHHHhcCC--CeeEEEecCcccHHHH---HHHHHHHHHh
Q 018167 70 ---GGVFRCTTGL------ADRFGKSRVFNTPLCEQGIVGFAIGLAAMG--NRAIAEIQFADYIFPA---FDQIVNEAAK 135 (360)
Q Consensus 70 ---g~~~~~~~~~------~~~~gp~r~i~~GIaE~~~vg~AaGlA~~G--~~p~~~~~f~~F~~ra---~dQi~~~~a~ 135 (360)
|++|..+.+| .+++||+||+|+|||||+++|+|+|+|+.| .+|+++++|++|+.+| +||+++++.
T Consensus 559 ~~~g~~~~~~~~l~~~~~~~~~~~p~Rv~ds~IsE~~~vG~a~G~A~~G~~~~~i~eaqf~dF~~~AQ~~~DQ~i~~~~- 637 (868)
T 2yic_A 559 RKTGEEFTPLQLLATNPDGTPTGGKFLVYNSALSEFAAVGFEYGYSVGNPDAMVLWEAQFGDFVNGAQSIIDEFISSGE- 637 (868)
T ss_dssp TTTCCEECGGGGGGBCTTSCBCSCEEEEEECCSCSHHHHHHHHHHHHHCTTSEEEEECSSGGGGGGGHHHHHHTTTTHH-
T ss_pred cCCCceecchhhhcccccchhhcCCcEEEECCccHHHHHHHHHHHHccCCCCceEEEEehHHHHhhHHHHHHHHHHHHH-
Confidence 5667778899 776669999999999999999999999999 5678888999999877 999998863
Q ss_pred cccccCCCccccceEEEcCCCCCCCCCCCCC---chHHHHHcCCCCcEEEeeCCHHHHHHHHHHhHhC--CCCEEEeccc
Q 018167 136 FRYRSGNQFNCGGLTVRAPYGAVGHGGHYHS---QSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRD--PNPVVFFEPK 210 (360)
Q Consensus 136 ~~~~~~~~~~v~~~v~~~~~g~~g~~g~~Hs---~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~a~~~--~~P~~i~~~k 210 (360)
.+|. . ++ +++++.+.|+.| +|++|| .|++..|+++|||+|++|+|+.|++.+|++++.. ++|+||++||
T Consensus 638 ~k~~--~--~~-~vvi~~p~G~~G-~Gp~Hs~~~~E~~l~l~~~pnm~V~~Ps~p~~~~~lLr~a~~~~~~~Pvii~~pk 711 (868)
T 2yic_A 638 AKWG--Q--LS-DVVLLLPHGHEG-QGPDHTSGRIERFLQLWAEGSMTIAMPSTPANYFHLLRRHGKDGIQRPLIVFTPK 711 (868)
T ss_dssp HHHC--C--CC-CCEEEEECCCSS-SCTTSSCCCHHHHHHHCCTTSCEEECCCSHHHHHHHHHHHHHSSCCCCEEEEECS
T ss_pred HHhC--C--CC-CEEEEecCCCCC-CChhhcCCcHHHHHhcCCCCCCEEEEeCCHHHHHHHHHHHHhcCCCCcEEEEech
Confidence 3332 1 34 666677766666 667774 5666666999999999999999999999998875 4999999999
Q ss_pred cccccCcccCC-----CCCcccCCCceEE---eeeCCcE--EEEEechhHHHHHHHHHHHHhcC-CCeeEEEeccccCCc
Q 018167 211 WLYRLSVEEVP-----EDDYMLPLSEAEV---IREGSDI--TLVGWGAQLSIMEQACLDAEKEG-ISCELIDLKTLIPWD 279 (360)
Q Consensus 211 ~l~r~~~~~v~-----~~~~~~~~Gk~~v---l~~G~dv--~Iia~G~~~~~al~Aa~~L~~~G-i~v~Vi~~~~ikP~d 279 (360)
+|+|.+.+.-+ ++.+..++|++.+ +++|+|| +|||+|.+ ..++++++ +++| ++++|||++||+|||
T Consensus 712 ~llR~~~~~~~~~~~~~~~f~~~ig~~~~~~~l~~g~dv~r~Ii~~G~~-~~~l~aa~--~~~g~i~v~VIdl~~l~Pld 788 (868)
T 2yic_A 712 SMLRNKAAVSDIRDFTESKFRSVLEEPMYTDGEGDRNKVTRLLLTSGKI-YYELAARK--AKENREDVAIVRIEQLAPLP 788 (868)
T ss_dssp GGGGCTTSCBCHHHHHSCCCCSEECCHHHHTSSCCGGGCCEEEEECSTH-HHHHHHHH--HHHTCTTEEEEEECEEESCC
T ss_pred HHhCCCCCCCCccccCCCCceecCCcceeecccccCCceeEEEEEecHH-HHHHHHHH--HhCCCCCEEEEEeeecCCCC
Confidence 99998653211 1123337899987 7899999 99999998 67777666 5779 999999999999999
Q ss_pred HHHHHHHHhcCCe---EEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCCCccc
Q 018167 280 KETVEASVRKTGR---LLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL 337 (360)
Q Consensus 280 ~~~l~~~~~~~~~---ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~~~~~ 337 (360)
.++|.+++++|++ +||+||++.+||+|++|++.+.+. +..++.|+.+++..+.+.|.
T Consensus 789 ~~~i~~~~~k~~~~~~vv~veE~~~~gG~g~~v~~~l~e~-~~~l~~~v~~vg~~d~~~p~ 848 (868)
T 2yic_A 789 RRRLAETLDRYPNVKEKFWVQEEPANQGAWPSFGLTLPEI-LPDHFTGLKRISRRAMSAPS 848 (868)
T ss_dssp HHHHHHHHHTCTTCCEEEEEEEEETTSTTHHHHHHHHHHH-CHHHHTTCEEEEECCCSSSS
T ss_pred HHHHHHHHHhcCCCceEEEEEeCCCCCCcHHHHHHHHHHH-hhhcCCCeEEeccCCcCCCC
Confidence 9999999999987 899999999999999999999883 32335689999888877653
No 22
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=4.3e-49 Score=427.91 Aligned_cols=322 Identities=18% Similarity=0.229 Sum_probs=261.4
Q ss_pred hhHHHHhhhc--ccccccchhhHHHHHhhcCCCCCCCcccHHHHHHHHHHHHHhcCCCEEEEcCCCCC------------
Q 018167 4 GLRRFVGSLS--RRNLSTACANKQLIQQHDGGVGSGKSLNLYSAINQALHIALETDPRAYVFGEDVGF------------ 69 (360)
Q Consensus 4 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~------------ 69 (360)
-|+++++.+. +.+|+.|+..++.++.+..-+.. ..++|.-+-.-++.+++++|++|+++++|++.
T Consensus 725 ~l~~~~~~~~~~p~~~~~~~~v~~~~~~r~~m~~~-~~i~~a~~e~la~~~ll~~~~~V~l~GeDv~rgtfs~rh~v~~d 803 (1113)
T 2xt6_A 725 MLQRIGDAHLALPEGFTVHPRVRPVLEKRREMAYE-GRIDWAFAELLALGSLIAEGKLVRLSGQDTQRGTFTQRHAVIVD 803 (1113)
T ss_dssp HHHHHHHHTTCCCTTCCCCTTTHHHHHHHHHHHHH-CCBCHHHHHHHHHHHHHHTTCEEEEEETTTTTCTTSCCCSSEEC
T ss_pred HHHHHHHhhccCCcccccchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHHHHHhcCCCEEEEcccCCCccchhcchheec
Confidence 3566666544 38999999999988765443333 44777777777788999999999999999985
Q ss_pred ---CCccccchhH------HHHhCCCcEEechhHHHHHHHHHHHHhcCC--CeeEEEecCcccHHHH---HHHHHHHHHh
Q 018167 70 ---GGVFRCTTGL------ADRFGKSRVFNTPLCEQGIVGFAIGLAAMG--NRAIAEIQFADYIFPA---FDQIVNEAAK 135 (360)
Q Consensus 70 ---g~~~~~~~~~------~~~~gp~r~i~~GIaE~~~vg~AaGlA~~G--~~p~~~~~f~~F~~ra---~dQi~~~~a~ 135 (360)
|++|..+.+| .+++||+||+|+||||++++|+|+|||+.| .+|+++++|++|+++| +||+++++.
T Consensus 804 ~~~g~~~~~l~~l~~~~~~~~~~~p~rv~ds~IsE~~~vg~a~G~A~~G~~~~~i~Eaqf~dF~~~aQ~~~DQ~i~~~~- 882 (1113)
T 2xt6_A 804 RKTGEEFTPLQLLATNPDGTPTGGKFLVYNSALSEFAAVGFEYGYSVGNPDAMVLWEAQFGDFVNGAQSIIDEFISSGE- 882 (1113)
T ss_dssp TTTCCEECGGGGGGBCTTSCBCSCEEEEEECCSCSHHHHHHHHHHHHHCTTSEEEEECSSGGGGGGGHHHHHHTTTTHH-
T ss_pred ccCCceecchhccccccccchhcCCcEEEECCCCHHHHHHHHHHHHhcCCCCceEEEEEEHHHHhhhHHHHHHHHHHHH-
Confidence 4556778999 776779999999999999999999999999 6678888999999877 999999864
Q ss_pred cccccCCCccccceEEEcCCCCCCCCCCCCCc-hHHHHH--cCCCCcEEEeeCCHHHHHHHHHHhHhC--CCCEEEeccc
Q 018167 136 FRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQ-SPEAFF--CHVPGLKVVIPRSPRQAKGLLLSCIRD--PNPVVFFEPK 210 (360)
Q Consensus 136 ~~~~~~~~~~v~~~v~~~~~g~~g~~g~~Hs~-~d~a~~--r~iPn~~V~~P~d~~e~~~~l~~a~~~--~~P~~i~~~k 210 (360)
.+|. . ++ +++++.+.|+.| +|++||. .+++++ +++|||+|++|+|+.|++.+|++++.. ++|++|++||
T Consensus 883 ~k~~--~--~~-~vv~~lp~G~~G-~G~~Hs~~~~E~~l~l~~~pnm~V~~Ps~~~~~~~lLr~a~~~~~~~Pvii~~pk 956 (1113)
T 2xt6_A 883 AKWG--Q--LS-DVVLLLPHGHEG-QGPDHTSGRIERFLQLWAEGSMTIAMPSTPANYFHLLRRHGKDGIQRPLIVFTPK 956 (1113)
T ss_dssp HHHC--C--CC-CCEEEEECCCSS-SCTTSSCCCHHHHHHHCCTTSCEEECCSSHHHHHHHHHHHHHSSCCCCEEEEECS
T ss_pred HHhC--C--CC-CEEEEeCCCCCC-CChhhhcccHHHHHhcCCCCCcEEEecCCHHHHHHHHHHHHhccCCCCEEEEech
Confidence 2332 1 34 677777766666 6677753 355555 999999999999999999999998875 4999999999
Q ss_pred cccccCcccCC-----CCCcccCCCceEE---eeeCCcE--EEEEechhHHHHHHHHHHHHhcC-CCeeEEEeccccCCc
Q 018167 211 WLYRLSVEEVP-----EDDYMLPLSEAEV---IREGSDI--TLVGWGAQLSIMEQACLDAEKEG-ISCELIDLKTLIPWD 279 (360)
Q Consensus 211 ~l~r~~~~~v~-----~~~~~~~~Gk~~v---l~~G~dv--~Iia~G~~~~~al~Aa~~L~~~G-i~v~Vi~~~~ikP~d 279 (360)
+|+|.+.+.-+ ++.+..++|++.+ +++|+|+ +|||+|.+ +.++++++ +++| ++++|||+++|+|||
T Consensus 957 ~L~R~~~~~~~~~~~~~~~f~~~ig~~~~~~~l~~g~dv~r~iv~~G~~-~~~l~aa~--~~~g~i~v~VIdl~~l~Pld 1033 (1113)
T 2xt6_A 957 SMLRNKAAVSDIRDFTESKFRSVLEEPMYTDGEGDRNKVTRLLLTSGKI-YYELAARK--AKENREDVAIVRIEQLAPLP 1033 (1113)
T ss_dssp GGGSCSSSCBCHHHHHSCCCCSEECCHHHHTSCCCSTTCCEEEEECSTH-HHHHHHHH--HHHTCTTEEEEEESEEESCC
T ss_pred HHhCCCCCCCcccccCCCCccccCCcceeeccccCccccCEEEEEECHH-HHHHHHHH--HhCCCCCEEEEEeeeecCCC
Confidence 99998653211 1123337899987 7899999 99999998 77777776 5779 999999999999999
Q ss_pred HHHHHHHHhcCCe---EEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCCCccc
Q 018167 280 KETVEASVRKTGR---LLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPL 337 (360)
Q Consensus 280 ~~~l~~~~~~~~~---ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~~~~~ 337 (360)
.++|.++++++++ +||+||++.+||+|++|++.+.+ .+..+..|+.+++..+.+.|.
T Consensus 1034 ~~~i~~~~~k~~~~~~vv~veE~~~~gG~gs~v~~~l~e-~~~~l~~~~~~vg~~d~~~p~ 1093 (1113)
T 2xt6_A 1034 RRRLAETLDRYPNVKEKFWVQEEPANQGAWPSFGLTLPE-ILPDHFTGLKRISRRAMSAPS 1093 (1113)
T ss_dssp HHHHHHHHTTCTTCCEEEEEEEEETTSTTHHHHHHHHHH-HSHHHHTTCEEEEECCCSSSS
T ss_pred HHHHHHHHHhCCCCceEEEEecCCCCCCcHHHHHHHHHH-HhhhcCCCeEEEccCCcCCCC
Confidence 9999999999988 89999999999999999999988 332345789999888877653
No 23
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=100.00 E-value=2.6e-44 Score=382.68 Aligned_cols=298 Identities=11% Similarity=0.078 Sum_probs=231.1
Q ss_pred CCcccHHHHHHHHHHHHHhcC---CCEEEEcCCCCC--CC-----ccc----cchhHH-----------HHhCCCcEEec
Q 018167 37 GKSLNLYSAINQALHIALETD---PRAYVFGEDVGF--GG-----VFR----CTTGLA-----------DRFGKSRVFNT 91 (360)
Q Consensus 37 ~~~~~~r~a~~~~L~~l~~~~---~~vv~i~~Dl~~--g~-----~~~----~~~~~~-----------~~~gp~r~i~~ 91 (360)
+.+.++|++|+++|.++++++ ++||++++|+.. |+ +.+ ....|. +.| |+||||+
T Consensus 489 ~~~~atr~afg~~L~~l~~~~~~~~~iV~i~pd~~~~~G~~dl~~S~~i~~~~~~~f~~~d~~~~~~~~e~~-~~R~~d~ 567 (886)
T 2qtc_A 489 SKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDE-KGQILQE 567 (886)
T ss_dssp SSCBCHHHHHHHHHHHHTTCTTTTTTEEEEESSCSGGGTCHHHHHHHCBBCC-----------------CBT-TCCBEEC
T ss_pred CCcchHHHHHHHHHHHHHhhcccCCcEEEEcCccccccCcccccccccccccCCcccccccchhhhhhhhcC-CCceeee
Confidence 456899999999999999998 999999999541 22 111 113343 678 9999999
Q ss_pred hhHHHHH-H---HHHHHHhcCC--CeeEEEecCccc-HHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCC
Q 018167 92 PLCEQGI-V---GFAIGLAAMG--NRAIAEIQFADY-IFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHY 164 (360)
Q Consensus 92 GIaE~~~-v---g~AaGlA~~G--~~p~~~~~f~~F-~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~ 164 (360)
||+||+| + ++|+|||++| ++||+. +|++| ++|++|||++++++++. ++ .+.........+++|+|
T Consensus 568 GIaE~~a~~~~~g~a~GlA~~G~~~~P~~~-~ys~F~~qRa~Dqi~~~~d~~~~------~v-~l~~~~~~~~~g~dG~t 639 (886)
T 2qtc_A 568 GINELGAGCSWLAAATSYSTNNLPMIPFYI-YYSMFGFQRIGDLCWAAGDQQAR------GF-LIGGTSGRTTLNGEGLQ 639 (886)
T ss_dssp CSCHHHHHHHHHHHHTHHHHTSCCCEEEEE-EEGGGSHHHHHHHHHHHHHTTCC------CE-EEEESCSTTTSTTTCTT
T ss_pred ccCchhhhhHHHHHHHHHHhcCCCceEEEE-EehHHHHHHHHHHHHHHHHHhcC------CE-EEEEecCcccCCCCCCc
Confidence 9999995 5 7999999999 899988 59999 69999999999997662 33 22222233345778888
Q ss_pred CC-chHHHHHcCCCCcEEEeeCCHHHHHHHHHHhHhC-CCC----EEEeccccccccCc--ccCCCCC-cccCCCceEEe
Q 018167 165 HS-QSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRD-PNP----VVFFEPKWLYRLSV--EEVPEDD-YMLPLSEAEVI 235 (360)
Q Consensus 165 Hs-~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~a~~~-~~P----~~i~~~k~l~r~~~--~~v~~~~-~~~~~Gk~~vl 235 (360)
|+ ++|+++||++|||+|++|+|+.|++.++++|++. ++| +|+++++.. .+. +.++++. +.+ +|+++++
T Consensus 640 Hq~~~~~a~lr~iPnl~V~~Pada~E~~~~l~~al~~~~gP~~e~v~i~~~r~~--~~~~~p~~~~~~~~~~-~gga~vl 716 (886)
T 2qtc_A 640 HEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEKQENVYYYITTLN--ENYHMPAMPEGAEEGI-RKGIYKL 716 (886)
T ss_dssp TCCSCHHHHHTTSTTEEEECCSSHHHHHHHHHHHHHHHHSTTCCCCEEEEECCS--CCBCCCCCCTTCHHHH-HHTCEEE
T ss_pred cCCcchHHHHhhCCCCEEEecCCHHHHHHHHHHHHHhcCCCCCceEEEEEeCCc--cccCCCCCCcchhhhc-cCceEEE
Confidence 86 7999999999999999999999999999999986 789 999777642 112 4444432 334 7899999
Q ss_pred eeC----CcEEEEEechhHHHHHHHHHHHHhc-CCCeeEEEeccccCCcHHHH-------------------HHHHhcCC
Q 018167 236 REG----SDITLVGWGAQLSIMEQACLDAEKE-GISCELIDLKTLIPWDKETV-------------------EASVRKTG 291 (360)
Q Consensus 236 ~~G----~dv~Iia~G~~~~~al~Aa~~L~~~-Gi~v~Vi~~~~ikP~d~~~l-------------------~~~~~~~~ 291 (360)
++| .|++||++|+++.+|++|++.|+++ ||+++|||++|++|||.+++ .+.+.. +
T Consensus 717 r~g~~~~~dVtLia~G~~v~~al~AAe~L~~e~GI~a~Vvd~~sl~pLD~e~i~~~kt~rl~p~~~~~~~~~e~~l~~-~ 795 (886)
T 2qtc_A 717 ETIEGSKGKVQLLGSGSILRHVREAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMND-A 795 (886)
T ss_dssp EEECCSSEEEEEEECGGGHHHHHHHHHHHHHHHCEEEEEEECSCHHHHHHHHHHHHHHHHHCTTSCCCCCHHHHHCCS-S
T ss_pred EecCCCCCCEEEEeCcHHHHHHHHHHHHHhhhhCCceEEEECCcCcccchHHHHHhhhcccCccccccHHHHHHhcCC-C
Confidence 987 7999999999999999999999999 99999999999999999864 233333 5
Q ss_pred eEEEEeCCCcCCchHHHHHHHHHHhccccCC-CceEEEecCCC-----CccccccccCCCCHHHHHHHHHHhhh
Q 018167 292 RLLISHEAPVTGGFGAEISASILERCFLRLE-APVARVCGLDT-----PFPLVFEPFYMPTKNKILDAIKSTVN 359 (360)
Q Consensus 292 ~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~-~~~~~i~~~~~-----~~~~~~e~~gl~~~~~I~~~i~~~l~ 359 (360)
.+|++|++.. |+++.+.+++ + .++.++| .|. +..+++++||+ |+++|++++++++.
T Consensus 796 ~vVa~ed~~~--g~~~~~~~~~--------~~~~~~~lG-~D~Fg~sg~~~~L~~~~Gl-d~e~Iv~~a~~~L~ 857 (886)
T 2qtc_A 796 PAVASTDYMK--LFAEQVRTYV--------PADDYRVLG-TDGFGRSDSRENLRHHFEV-DASYVVVAALGELA 857 (886)
T ss_dssp CEEEECSSCT--HHHHTTGGGC--------CSSCEEEEC-CCSCCCCCCHHHHHHHTTC-SHHHHHHHHHHHHH
T ss_pred CEEEEEeccc--chHHHHHHHc--------CCCCeEEEE-eCCCCCCCCHHHHHHHcCC-CHHHHHHHHHHHHH
Confidence 5777777654 5666543332 3 5666674 343 33578999999 99999999998764
No 24
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=100.00 E-value=4.8e-42 Score=359.83 Aligned_cols=305 Identities=12% Similarity=0.116 Sum_probs=243.8
Q ss_pred ccHHHHHHHHHHHHHhcCCC-EEEEcCCCCCCCccccchhHHHH---------hC-C--------CcEEechhHHHHHHH
Q 018167 40 LNLYSAINQALHIALETDPR-AYVFGEDVGFGGVFRCTTGLADR---------FG-K--------SRVFNTPLCEQGIVG 100 (360)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~-vv~i~~Dl~~g~~~~~~~~~~~~---------~g-p--------~r~i~~GIaE~~~vg 100 (360)
...+.+++++|.++++++|+ ++++++|+..++ .+..|.+. +. | +|||+ ||+||+|++
T Consensus 429 ~~atra~g~~L~~l~~~~p~~~vv~sADl~~Sn---~t~~f~~~t~~~~~~~~~~~P~d~~~~~~GR~i~-GI~Eh~M~g 504 (845)
T 3ahc_A 429 VEAPRALGAYCRDIIKNNPDSFRIFGPDETASN---RLNATYEVTDKQWDNGYLSGLVDEHMAVTGQVTE-QLSEHQCEG 504 (845)
T ss_dssp ECTHHHHHHHHHHHHHHSTTTEEEEESSCTTTT---TCGGGGGTCCEECCSCCCCTTTCCSEESSCSEEE-CSCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhCCCcEEEEecCCCccc---cHHHHHhhcccccccccccCCcccccCCCCcEee-eecHHHHHH
Confidence 34577788999999999999 999999987332 35555554 41 4 89999 999999999
Q ss_pred HHHHHhcCCCeeEEEecCcccH---HHHHHH----HHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCCC-c--hHH
Q 018167 101 FAIGLAAMGNRAIAEIQFADYI---FPAFDQ----IVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHS-Q--SPE 170 (360)
Q Consensus 101 ~AaGlA~~G~~p~~~~~f~~F~---~ra~dQ----i~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~Hs-~--~d~ 170 (360)
+++|||++|.+||+. +|++|+ .|+++| ||+.++++-|+... .++ ++|+++.+...|++|+||+ + +|+
T Consensus 505 ia~Glal~G~~~f~~-t~atFl~~~~~a~~q~akwiR~a~a~~~wr~~~-~~v-~~v~Th~si~~GeDGpTHQ~~e~~d~ 581 (845)
T 3ahc_A 505 FLEAYLLTGRHGIWS-SYESFVHVIDSMLNQHAKWLEATVREIPWRKPI-SSV-NLLVSSHVWRQDHNGFSHQDPGVTSL 581 (845)
T ss_dssp HHHHHHHTTCEEEEE-EEHHHHGGGHHHHHHHHHHHHHHHHHCTTSCCC-BCE-EEEEESCGGGCTTTCGGGCCCTHHHH
T ss_pred HHHHHHhcCCCCcee-cchhhhchhhhHHHHHHHHHHhhHHhhhhcccC-Cce-EEEEeCCceeecCCCCCCCCcHHHHH
Confidence 999999999999999 477776 899999 99885655333221 256 7888998888999999985 4 455
Q ss_pred HHHc---CCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEEeccccccccCcccCCCCCc---ccCCCceEEe---ee--C-
Q 018167 171 AFFC---HVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDY---MLPLSEAEVI---RE--G- 238 (360)
Q Consensus 171 a~~r---~iPn~~V~~P~d~~e~~~~l~~a~~~~~P~~i~~~k~l~r~~~~~v~~~~~---~~~~Gk~~vl---~~--G- 238 (360)
..++ .+|||+|+.|+|++|+..+++.|++.++|+|++ .+.|++.|.++..++ .+..|++.+. ++ |
T Consensus 582 l~~~r~~~iPn~~V~~PaDanet~~a~~~al~~~~~~~v~---v~sRq~~p~~~~~~~a~~~~~~G~~v~~~as~d~~g~ 658 (845)
T 3ahc_A 582 LINKTFNNDHVTNIYFATDANMLLAISEKCFKSTNKINAI---FAGKQPAPTWVTLDEARAELEAGAAEWKWASNAENND 658 (845)
T ss_dssp HGGGCCTTCCCEEEEECCSHHHHHHHHHHHHHCBSCEEEE---ECCCSCEEECSCHHHHHHHHHHSEEECTTTCCCSSTT
T ss_pred HHHhhccCCCCeEEEeCCCHHHHHHHHHHHHHcCCCeEEE---EecCCCCCccCCchhhhhhhcCCeEEEEeecccccCC
Confidence 5555 789999999999999999999999998888884 347788888765443 4678887666 45 5
Q ss_pred -CcEEEEEechh-HHHHHHHHHHHHhcCCCeeEEEeccc---cCCcHHHHHHHHhcCCeEEEEeCCCc--CCchHHHHHH
Q 018167 239 -SDITLVGWGAQ-LSIMEQACLDAEKEGISCELIDLKTL---IPWDKETVEASVRKTGRLLISHEAPV--TGGFGAEISA 311 (360)
Q Consensus 239 -~dv~Iia~G~~-~~~al~Aa~~L~~~Gi~v~Vi~~~~i---kP~d~~~l~~~~~~~~~ivvvEe~~~--~GGlgs~v~~ 311 (360)
.||+||++|+. +.+|++|++.|+++||+++|||+++| +|.|++.+..+.+.++.|+|+|+|.. .||+++.|++
T Consensus 659 ~~DVvLiAtGsev~~EAL~AA~~L~~~GI~vRVVsm~~lf~lqp~~~~~~~ls~~~~~~l~T~e~h~i~~~gGlgsaV~e 738 (845)
T 3ahc_A 659 EVQVVLASAGDVPTQELMAASDALNKMGIKFKVVNVVDLLKLQSRENNDEALTDEEFTELFTADKPVLFAYHSYAQDVRG 738 (845)
T ss_dssp TCSEEEEEESHHHHHHHHHHHHHHHHTTCCEEEEEECBGGGGSCTTTCTTSCCHHHHHHHHCSSSCEEEEESSCHHHHHH
T ss_pred CCCEEEEEeccHHHHHHHHHHHHHHhCCCCEEEEEeCCCCccCCccccccccCHHHhCcEeecCCcceeeecCcHHHHHH
Confidence 89999999966 56699999999999999999999999 77766554445566788999999987 6999999999
Q ss_pred HHHHhccccCCCceEEEecCCC----CccccccccCCCCHHHHHHHHHHhh
Q 018167 312 SILERCFLRLEAPVARVCGLDT----PFPLVFEPFYMPTKNKILDAIKSTV 358 (360)
Q Consensus 312 ~l~~~~~~~l~~~~~~i~~~~~----~~~~~~e~~gl~~~~~I~~~i~~~l 358 (360)
.+.++. -+.++.++|-.+. ...+++++||| |+++|++++++++
T Consensus 739 ll~~r~---~~~~l~v~G~~d~G~tgtp~eLl~~~gl-d~~~Iv~~a~~~l 785 (845)
T 3ahc_A 739 LIYDRP---NHDNFHVVGYKEQGSTTTPFDMVRVNDM-DRYALQAAALKLI 785 (845)
T ss_dssp HTTTST---TGGGEEEECCCSCCCSCCHHHHHHTTTC-SHHHHHHHHHHHH
T ss_pred HHHhCC---CCceEEEEeccCCCCCCCHHHHHHHhCc-CHHHHHHHHHHHc
Confidence 998762 1346777754441 12368999999 9999999999876
No 25
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=99.95 E-value=1.7e-28 Score=241.73 Aligned_cols=284 Identities=17% Similarity=0.141 Sum_probs=100.3
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHH---HhCCCcEEechhHHHHHHHHHHHHhcCCCeeEEEe
Q 018167 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLAD---RFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEI 116 (360)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~---~~gp~r~i~~GIaE~~~vg~AaGlA~~G~~p~~~~ 116 (360)
++-.+|+++++.. .+.+++..-+-...+. ..+.|.+ ++| .+|+++. +|++++++|.|+|+.|.||++++
T Consensus 23 ~~GneAva~~~~~---ag~~~v~~yPgtP~t~---i~~~l~~~~~~~g-~~~i~~e-~E~~a~~~a~Gaa~aG~r~~~~t 94 (395)
T 1yd7_A 23 IQGDEAIARAAIL---AGCRFYAGYPITPASE---IFEAMALYMPLVD-GVVIQME-DEIASIAAAIGASWAGAKAMTAT 94 (395)
T ss_dssp EEHHHHHHHHHHH---HTCCEEEECCBTTTBC---HHHHHHHHGGGGT-CEEEECS-CHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eEHHHHHHHHHHH---cCCCEEEEEECcchHH---HHHHHHHhhhhcC-cEEEEeC-CHHHHHHHHHHHHHhCCcEEEEe
Confidence 5667788877765 4666777666654322 2344544 563 7899998 99999999999999999999994
Q ss_pred cCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcC--CCCCCCCCCCCCchH--HHHHcCCC--CcEEEeeCCHHHH
Q 018167 117 QFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAP--YGAVGHGGHYHSQSP--EAFFCHVP--GLKVVIPRSPRQA 190 (360)
Q Consensus 117 ~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~--~g~~g~~g~~Hs~~d--~a~~r~iP--n~~V~~P~d~~e~ 190 (360)
.++++.+++|||.+ ++.. .+ |+|++.. ++...+.++.+.++| .+++.+.| ++.+++|+|++|+
T Consensus 95 -s~~G~~~~~d~l~~-aa~~--------~~-P~Vi~~~~~~~~~~g~~~~~~~sd~~~~~~~~~g~~g~~vl~p~~~qea 163 (395)
T 1yd7_A 95 -SGPGFSLMQENIGY-AVMT--------ET-PVVIVDVQRSGPSTGQPTLPAQGDIMQAIWGTHGDHSLIVLSPSTVQEA 163 (395)
T ss_dssp -ETTHHHHHTTTCC-----C--------CC-CEEEEEEC--------------------------CCCCEEECCCSHHHH
T ss_pred -CchHHHHHHHHHHH-HHhc--------CC-CEEEEEeeCCCCCCCCCcccchhHHHHHHhccCCCcceEEEeCCCHHHH
Confidence 77777789999986 4432 23 4454433 322211123222333 34556666 9999999999999
Q ss_pred HHHHHHhH----hCCCCEEEeccccccccCc----c---cCC----------C---CCccc--CC--------Cce----
Q 018167 191 KGLLLSCI----RDPNPVVFFEPKWLYRLSV----E---EVP----------E---DDYML--PL--------SEA---- 232 (360)
Q Consensus 191 ~~~l~~a~----~~~~P~~i~~~k~l~r~~~----~---~v~----------~---~~~~~--~~--------Gk~---- 232 (360)
..++.+|+ +.+.||++++|+.++.... + .++ + ..+.. +. |..
T Consensus 164 ~~l~~~A~~lA~~~~~PVi~~~~~~l~h~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~ 243 (395)
T 1yd7_A 164 FDFTIRAFNLSEKYRTPVILLTDAEVGHMRERVYIPNPDEIEIINRKLPRNEEEAKLPFGDPHGDGVPPMPIFGKGYRTY 243 (395)
T ss_dssp HHHHHHHHHHHHHHTSEEEEEECHHHHHCEEEEEECCGGGSCCCCCC---------------------------------
T ss_pred HHHHHHHHHHHHHHCCCEEEEcchhHhCeeceecCCChHHhhhhcccccCCCcccccCcccCCCCCCCCCccCCCCceeE
Confidence 99999998 4589999999987653311 0 010 0 01111 10 110
Q ss_pred ------------------------------------------EEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEE
Q 018167 233 ------------------------------------------EVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELI 270 (360)
Q Consensus 233 ------------------------------------------~vl~~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi 270 (360)
++.++|+|++||++|+++..+++|++.|+++|++++||
T Consensus 244 ~~~~~h~e~g~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~g~dv~iva~G~~~~~~~eA~~~L~~~Gi~v~vi 323 (395)
T 1yd7_A 244 VTGLTHDEKGRPRTVDREVHERLIKRIVEKIEKNKKDIFTYETYELEDAEIGVVATGIVARSALRAVKMLREEGIKAGLL 323 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecccccccccCcccCCHHHHHHHHHHHHHHHHHHHhhcCccEEecCCCCCEEEEEECccHHHHHHHHHHHHHcCCceEEE
Confidence 12346789999999999999999999999999999999
Q ss_pred EeccccCCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCCCccccccccCCCCHHHH
Q 018167 271 DLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLVFEPFYMPTKNKI 350 (360)
Q Consensus 271 ~~~~ikP~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~~~~~~~e~~gl~~~~~I 350 (360)
|+++++|||.+.|.++++++++|+|+||+. ||+++.|++.+.+. .++.+++..+. ..|+++.|
T Consensus 324 ~~r~~~Pld~~~i~~~~~~~~~vvvvEe~~--G~l~~~v~~~~~~~------~~~~~~gk~~g---------~~~~~~ei 386 (395)
T 1yd7_A 324 KIETIWPFDFELIERIAERVDKLYVPEMNL--GQLYHLIKEGANGK------AEVKLISKIGG---------EVHTPMEI 386 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EeCeecCCCHHHHHHHHhcCCEEEEEeCCc--hHHHHHHHHHhcCC------CCeEEEeccCC---------CcCCHHHH
Confidence 999999999999999999999999999996 99999999887642 23444544332 13589999
Q ss_pred HHHHHHhhh
Q 018167 351 LDAIKSTVN 359 (360)
Q Consensus 351 ~~~i~~~l~ 359 (360)
.++++++++
T Consensus 387 ~~~i~~~~~ 395 (395)
T 1yd7_A 387 FEFIRREFK 395 (395)
T ss_dssp ---------
T ss_pred HHHHHHhhC
Confidence 999888764
No 26
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=99.78 E-value=1.1e-17 Score=184.28 Aligned_cols=257 Identities=13% Similarity=0.135 Sum_probs=171.3
Q ss_pred HhCCCcEEechhHHHHHHHHHHHHhcCCCeeEEEecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCC
Q 018167 82 RFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHG 161 (360)
Q Consensus 82 ~~gp~r~i~~GIaE~~~vg~AaGlA~~G~~p~~~~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~ 161 (360)
.||..+.+....+|..+++++.|.|.+|.|+++.+ .+.=+..+.|.+.. ++..+ +|+ .+++..++|...+.
T Consensus 50 ~~G~~~~v~~~esE~aA~~aaiGAa~aGaR~~t~T-s~~Gl~lm~e~l~~-~ag~~------~P~-Vi~va~R~g~~~gl 120 (1231)
T 2c42_A 50 IFGQTLTIREMQSEAGAAGAVHGALAAGALTTTFT-ASQGLLLMIPNMYK-ISGEL------LPG-VFHVTARAIAAHAL 120 (1231)
T ss_dssp TTSCCCEEEECSSHHHHHHHHHHHHHTTCCEEEEE-CHHHHHHHHHHHHH-HHHTT------CCC-EEEEEECCCCSSSB
T ss_pred hcCCceEEEecCChHHHHHHHHHHHHcCChHhhhc-cHHHHHHHHHHHHH-HhCCC------CCE-EEEECCCCccCCCC
Confidence 36767899999999999999999999999999994 55544555677653 44333 355 44444555433221
Q ss_pred CCCCCchHHHHHcCCCCcEEEeeCCHHHHHHHHHHhH----hCCCCEEEeccccccccCcc--cCCC-------------
Q 018167 162 GHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCI----RDPNPVVFFEPKWLYRLSVE--EVPE------------- 222 (360)
Q Consensus 162 g~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~a~----~~~~P~~i~~~k~l~r~~~~--~v~~------------- 222 (360)
..+-.+.|. +....+|+.|++|+|++|++.++..|+ +++.||+++++..++..... ++++
T Consensus 121 si~~~hsd~-~~ar~~G~~vl~pss~QEa~dl~~~Af~lAek~~~PVi~~~Dg~~~sh~~~~vev~~~~~~~~~~~~~~~ 199 (1231)
T 2c42_A 121 SIFGDHQDI-YAARQTGFAMLASSSVQEAHDMALVAHLAAIESNVPFMHFFDGFRTSHEIQKIEVLDYADMASLVNQKAL 199 (1231)
T ss_dssp CCSCCSHHH-HTTTTSSCEEEECCSHHHHHHHHHHHHHHHHHHCCCEEEEEETTTTTTCEEEEECCCHHHHHHTSCHHHH
T ss_pred cCCCchhhH-HHHhcCCcEEEECCCHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccceeeeecCCHHHHHhhcChhhh
Confidence 222235554 346679999999999999999999884 46999999988743211100 1110
Q ss_pred ---------CCcccCCCc------------------------------------------eE-EeeeCCcEEEEEechhH
Q 018167 223 ---------DDYMLPLSE------------------------------------------AE-VIREGSDITLVGWGAQL 250 (360)
Q Consensus 223 ---------~~~~~~~Gk------------------------------------------~~-vl~~G~dv~Iia~G~~~ 250 (360)
.+..++.|. .+ .-.++.|++||++|+++
T Consensus 200 ~~~~~~~~~p~~p~~~g~a~~~~~~~~~~e~~~~~~~~~~~~v~~~~~k~~~~~g~~y~~~e~~g~~dAd~vIVa~Gs~~ 279 (1231)
T 2c42_A 200 AEFRAKSMNPEHPHVRGTAQNPDIYFQGREAANPYYLKVPGIVAEYMQKVASLTGRSYKLFDYVGAPDAERVIVSMGSSC 279 (1231)
T ss_dssp HHHHHHSCCTTSCCEESCBCCTTTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHSCCCCSEEEEECTTCSEEEEECSTHH
T ss_pred hhccccccCCCCceecCCCcCcchhhhhHhhhhhhhHhhHHHHHHHHHHHHHHhcccccceeeecCCCCCEEEEEeCHHH
Confidence 001122222 11 12467899999999999
Q ss_pred HHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHH-hcCCeEEEEeCCCcCCc----hHHHHHHHHHHhccccCCCce
Q 018167 251 SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASV-RKTGRLLISHEAPVTGG----FGAEISASILERCFLRLEAPV 325 (360)
Q Consensus 251 ~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~-~~~~~ivvvEe~~~~GG----lgs~v~~~l~~~~~~~l~~~~ 325 (360)
..+++|++.|+++|++++||++++++|||.+.|.+++ +++++|+|+|+....|. +-..|...+.... -..++
T Consensus 280 ~~~~eAv~~L~~~G~kvgvl~lr~~rPfp~~~i~~~l~~~~k~i~VvE~~~~~g~~G~pl~~dv~~al~~~~---~~~~~ 356 (1231)
T 2c42_A 280 ETIEEVINHLAAKGEKIGLIKVRLYRPFVSEAFFAALPASAKVITVLDRTKEPGAPGDPLYLDVCSAFVERG---EAMPK 356 (1231)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEESEEESCCHHHHHHTSCTTCCEEEEEESSCCTTCSSCHHHHHHHHHHHHHC---SCCCE
T ss_pred HHHHHHHHHHHhcCCceEEEEEEEeCCCCHHHHHHHHHhcCCEEEEEECCCCCCCCcccHHHHHHHHHhhcc---CCCCe
Confidence 9999999999999999999999999999999999998 66799999999733322 3345554444321 01132
Q ss_pred EEEecCCCCccccccccCCCCHHHHHHHHHHhh
Q 018167 326 ARVCGLDTPFPLVFEPFYMPTKNKILDAIKSTV 358 (360)
Q Consensus 326 ~~i~~~~~~~~~~~e~~gl~~~~~I~~~i~~~l 358 (360)
... +.- + +.-.-+ +++.|.+.++++.
T Consensus 357 ~~~-gr~---g--l~g~~~-tp~~i~~~~~~l~ 382 (1231)
T 2c42_A 357 ILA-GRY---G--LGSKEF-SPAMVKSVYDNMS 382 (1231)
T ss_dssp EEE-EEC---C--GGGCCC-CHHHHHHHHHHHH
T ss_pred EEE-EEE---C--CCCCCC-CHHHHHHHHHHhh
Confidence 211 111 1 111124 8888888877654
No 27
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=99.70 E-value=4e-17 Score=134.00 Aligned_cols=106 Identities=25% Similarity=0.340 Sum_probs=87.4
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHHh
Q 018167 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILER 316 (360)
Q Consensus 237 ~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~~ 316 (360)
+|.|++||+||+++..|++|++.|+++|++++|+++++++|||.+.+.++++++++|+|+|++ ..||+++.|...+
T Consensus 12 ~g~dv~iv~~Gs~~~~a~eA~~~L~~~Gi~v~vi~~r~~~P~d~~~l~~~~~~~~~vvvvE~~-~~G~l~~~i~~~~--- 87 (118)
T 3ju3_A 12 KEADITFVTWGSQKGPILDVIEDLKEEGISANLLYLKMFSPFPTEFVKNVLSSANLVIDVESN-YTAQAAQMIKLYT--- 87 (118)
T ss_dssp SSCSEEEEEEGGGHHHHHHHHHHHHHTTCCEEEEEECSSCSCCHHHHHHHHTTCSCCCCCCCC-CCCCHHHHHHHHH---
T ss_pred CCCCEEEEEECccHHHHHHHHHHHHHCCCceEEEEECeEecCCHHHHHHHHcCCCEEEEEECC-CCCcHHHHHHHHc---
Confidence 688999999999999999999999999999999999999999999999999999999999997 4799999987543
Q ss_pred ccccCCCceEEEecCCCCccccccccCCCCHHHHHHHHHHhhh
Q 018167 317 CFLRLEAPVARVCGLDTPFPLVFEPFYMPTKNKILDAIKSTVN 359 (360)
Q Consensus 317 ~~~~l~~~~~~i~~~~~~~~~~~e~~gl~~~~~I~~~i~~~l~ 359 (360)
+ . .++..+.+.++. -+ +++.|.+.++++++
T Consensus 88 ~---~-~~~~~i~~~~G~--------~~-~~~ei~~~i~~~~~ 117 (118)
T 3ju3_A 88 G---I-DIKNKILKYNGR--------HM-TEDEILKSAKEILN 117 (118)
T ss_dssp C---C-CCCCCCCCBTTB--------CC-CHHHHHHHHHHHHH
T ss_pred C---C-CceeEEeeeCCe--------eC-CHHHHHHHHHHHhh
Confidence 1 0 122222222221 14 99999999998874
No 28
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=94.60 E-value=0.18 Score=50.80 Aligned_cols=157 Identities=15% Similarity=0.114 Sum_probs=85.2
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcC-CCeeEEEecC
Q 018167 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQF 118 (360)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~-G~~p~~~~~f 118 (360)
.+..+++.+.|.+.. -+.|+.+-.+ . .....+.+.+ .+.=|++.+ ..|++++-+|-|+|+. |...++..|+
T Consensus 3 ~~~a~~l~~~L~~~G--V~~vfg~PG~-~---~~~l~dal~~-~~~i~~i~~-~~E~~Aa~~A~GyAr~tg~~~v~~~Ts 74 (549)
T 3eya_A 3 QTVAAYIAKTLESAG--VKRIWGVTGD-S---LNGLSDSLNR-MGTIEWMST-RHEEVAAFAAGAEAQLSGELAVCAGSC 74 (549)
T ss_dssp CBHHHHHHHHHHHTT--CCEEEECCCG-G---GHHHHHHHHH-HCSSEEEEC-SSHHHHHHHHHHHHHHHSSCEEEEECT
T ss_pred ccHHHHHHHHHHHCC--CCEEEEcCCC-c---hHHHHHHHHh-cCCCeEEEe-CChHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 455566666555431 2334433322 1 1112334443 322467766 5999999999999997 5444443366
Q ss_pred cccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCC-CCCCCCCCCCchHHHHHcCCCCcEEEeeCCHHHHHHHHHHh
Q 018167 119 ADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYG-AVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSC 197 (360)
Q Consensus 119 ~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g-~~g~~g~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~a 197 (360)
.+=...++.-|-+ +...+ .|+ +++++... ..-+.+..|......+++.+-.. .+...+++++...++.|
T Consensus 75 GpG~~N~~~gi~~-A~~~~------vPv--l~itg~~~~~~~~~~~~Q~~d~~~~~~~~tk~-~~~v~~~~~~~~~i~~A 144 (549)
T 3eya_A 75 GPGNLHLINGLFD-CHRNH------VPV--LAIAAHIPSSEIGSGYFQETHPQELFRECSHY-CELVSSPEQIPQVLAIA 144 (549)
T ss_dssp THHHHTTHHHHHH-HHHTT------CCE--EEEEEESCGGGTTSCCTTCCCHHHHTSTTCSE-EEECCSGGGHHHHHHHH
T ss_pred CCcHhhhHHHHHH-HHhhC------CCE--EEEeCCCchhhcCCCCCCccCHHHHHhhhhhe-EEEeCCHHHHHHHHHHH
Confidence 6544444444543 33222 344 23333211 11123445556678889988765 34455666665555555
Q ss_pred H----hCCCCEEEeccccccc
Q 018167 198 I----RDPNPVVFFEPKWLYR 214 (360)
Q Consensus 198 ~----~~~~P~~i~~~k~l~r 214 (360)
+ ..++||+|-.|..+..
T Consensus 145 ~~~A~~~~GPV~l~iP~dv~~ 165 (549)
T 3eya_A 145 MRKAVLNRGVSVVVLPGDVAL 165 (549)
T ss_dssp HHHHHHTTSEEEEEEEHHHHT
T ss_pred HHHHhhCCCCEEEEeChhHhh
Confidence 4 4589999988876543
No 29
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=94.13 E-value=0.42 Score=48.21 Aligned_cols=154 Identities=14% Similarity=0.023 Sum_probs=90.0
Q ss_pred cccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcC-CCeeEEEec
Q 018167 39 SLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQ 117 (360)
Q Consensus 39 ~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~-G~~p~~~~~ 117 (360)
+++..+++.+.|.+.. -+.++.+-.+- .....+.+.+ . +=|++.+ ..|++++.+|.|+|+. |...++..|
T Consensus 3 ~~~~a~~l~~~L~~~G--V~~vfg~PG~~----~~~l~~al~~-~-~i~~i~~-~~E~~Aa~~A~Gyar~tg~p~v~~~T 73 (563)
T 2uz1_A 3 MITGGELVVRTLIKAG--VEHLFGLHGAH----IDTIFQACLD-H-DVPIIDT-RHEAAAGHAAEGYARAGAKLGVALVT 73 (563)
T ss_dssp EEEHHHHHHHHHHHHT--CCCEEECCCGG----GHHHHHHHHH-H-TCCEEEC-SSHHHHHHHHHHHHHHHTSCEEEEEC
T ss_pred ccCHHHHHHHHHHHCC--CCEEEECCCCc----hHHHHHHHHh-c-CCcEEee-CCHHHHHHHHHHHHHHhCCCEEEEEc
Confidence 4566777777776543 23444432221 1112333433 3 3578876 6999999999999997 544444445
Q ss_pred CcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCC-CCCCCCCCCC-chHHHHHcCCCCcEEEeeCCHHHHHHHHH
Q 018167 118 FADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYG-AVGHGGHYHS-QSPEAFFCHVPGLKVVIPRSPRQAKGLLL 195 (360)
Q Consensus 118 f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g-~~g~~g~~Hs-~~d~a~~r~iPn~~V~~P~d~~e~~~~l~ 195 (360)
+.+=...++.-|-+ +-+.+ .|+ +++++... ..-+.+.++. .+..++++.+-.. .+...+++++...++
T Consensus 74 sGpG~~N~~~~l~~-A~~~~------~Pl--l~itg~~~~~~~~~~~~Q~~~d~~~~~~~~tk~-~~~v~~~~~~~~~l~ 143 (563)
T 2uz1_A 74 AGGGFTNAVTPIAN-AWLDR------TPV--LFLTGSGALRDDETNTLQAGIDQVAMAAPITKW-AHRVMATEHIPRLVM 143 (563)
T ss_dssp TTHHHHTTHHHHHH-HHHHT------CCE--EEEEEECCGGGTTSCCTTCCCCHHHHHGGGCSE-EEECCCGGGHHHHHH
T ss_pred cCccHHHHHHHHHH-HHhcC------CCE--EEEeCCCCcccCCchhhhhhccHHHHhhhhhce-EEEcCCHHHHHHHHH
Confidence 66544444444543 32222 344 33333222 1122344555 6677899988765 455567777777777
Q ss_pred HhHh----C-CCCEEEecccc
Q 018167 196 SCIR----D-PNPVVFFEPKW 211 (360)
Q Consensus 196 ~a~~----~-~~P~~i~~~k~ 211 (360)
.|+. . ++||+|-.|..
T Consensus 144 ~A~~~a~~~~~GPV~l~iP~d 164 (563)
T 2uz1_A 144 QAIRAALSAPRGPVLLDLPWD 164 (563)
T ss_dssp HHHHHHHSSSCCCEEEEEEHH
T ss_pred HHHHHhcCCCCceEEEEeCHH
Confidence 6665 3 59999988877
No 30
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=94.12 E-value=0.15 Score=52.07 Aligned_cols=153 Identities=10% Similarity=-0.025 Sum_probs=89.1
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHh----CCCcEEechhHHHHHHHHHHHHhcCCCeeEE-
Q 018167 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRF----GKSRVFNTPLCEQGIVGFAIGLAAMGNRAIA- 114 (360)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~----gp~r~i~~GIaE~~~vg~AaGlA~~G~~p~~- 114 (360)
++..+++.+.|.+ .+=+.++..+... ...|.+.+ +.=|++.+ ..|++++.+|.|+|+..-+|-+
T Consensus 4 ~~~a~~lv~~L~~---~GV~~vfg~PG~~-------~~~l~~al~~~~~~i~~i~~-~~E~~Aa~~A~GyAr~tgk~~v~ 72 (590)
T 1v5e_A 4 INIGLAVMKILES---WGADTIYGIPSGT-------LSSLMDAMGEEENNVKFLQV-KHEEVGAMAAVMQSKFGGNLGVT 72 (590)
T ss_dssp EEHHHHHHHHHHH---TTCCEEEECCCTT-------THHHHTTSSSTTCCCEEEEC-SSHHHHHHHHHHHHHTTCCCCEE
T ss_pred ccHHHHHHHHHHH---cCCCEEEEecCCc-------hHHHHHHHHhcCCCCeEEee-CCHHHHHHHHHHHHHHHCCCEEE
Confidence 4556666666654 3444454443321 23333332 11356655 6999999999999998554444
Q ss_pred EecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCC-CCCCCCCCCchHHHHHcCCCCcEEEeeCCHHHHHHH
Q 018167 115 EIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA-VGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGL 193 (360)
Q Consensus 115 ~~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~-~g~~g~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~ 193 (360)
..|..+-...++.-|.+ +.+.+ .|+ +++++.-.. .-+.+.++......+++.+-.. .+.+.+++++...
T Consensus 73 ~~tsGpG~~N~~~gl~~-A~~~~------vPl--l~Itg~~p~~~~g~~~~Q~~d~~~~~~~~tk~-~~~v~~~~~~~~~ 142 (590)
T 1v5e_A 73 VGSGGPGASHLINGLYD-AAMDN------IPV--VAILGSRPQRELNMDAFQELNQNPMYDHIAVY-NRRVAYAEQLPKL 142 (590)
T ss_dssp EECTTHHHHTTHHHHHH-HHHHT------CCE--EEEEEECCGGGTTTTCTTCCCCHHHHHTTCSE-EEECCSGGGHHHH
T ss_pred EeCcChHHHHHHHHHHH-HHhcC------CCE--EEEcCCCCcccCCCCcccccCHHHHHHhhccE-EEEeCCHHHHHHH
Confidence 34566655555555553 33222 344 233332221 1122233345567889998766 6777888888777
Q ss_pred HHHhHh----C-CCCEEEeccccccc
Q 018167 194 LLSCIR----D-PNPVVFFEPKWLYR 214 (360)
Q Consensus 194 l~~a~~----~-~~P~~i~~~k~l~r 214 (360)
++.|++ . ++||+| .|+.+..
T Consensus 143 i~~A~~~A~~~~~GPV~l-iP~dv~~ 167 (590)
T 1v5e_A 143 VDEAARMAIAKRGVAVLE-VPGDFAK 167 (590)
T ss_dssp HHHHHHHHHHTTSEEEEE-EETTGGG
T ss_pred HHHHHHHHhcCCCceEEE-Eccchhh
Confidence 777665 3 499999 9998754
No 31
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=93.30 E-value=0.22 Score=50.99 Aligned_cols=155 Identities=14% Similarity=0.024 Sum_probs=88.4
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcC-CCeeEEE-ec
Q 018167 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAE-IQ 117 (360)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~-G~~p~~~-~~ 117 (360)
++..+++.+.|.+ .+=+.++..+... .....+.+.+ .+.=|++.+ ..|++++.+|.|+|+. |.+|-++ .|
T Consensus 27 ~~~a~~l~~~L~~---~GV~~vfg~PG~~---~~~l~~al~~-~~~i~~i~~-~~E~~Aa~~A~GyAr~tgg~~~v~~~T 98 (616)
T 2pan_A 27 MRAVDAAMYVLEK---EGITTAFGVPGAA---INPFYSAMRK-HGGIRHILA-RHVEGASHMAEGYTRATAGNIGVCLGT 98 (616)
T ss_dssp EEHHHHHHHHHHH---TTCCEEEECCCGG---GHHHHHHHHH-HCCCEEEEC-SSHHHHHHHHHHHHHHSTTCCEEEEEC
T ss_pred CcHHHHHHHHHHH---CCCCEEEECCCCc---cHHHHHHHHh-cCCCcEEee-CCHHHHHHHHHHHHHhcCCCceEEEeC
Confidence 4556666666643 3444455443311 1112333433 312366655 7999999999999997 4665544 35
Q ss_pred CcccHHHHHHHHHHHHHhcccccCCCccccceEEEcC-CCCCCCCCCCCCchHHHHHcCCCCcEEEeeCCHHHHHHHHHH
Q 018167 118 FADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAP-YGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLS 196 (360)
Q Consensus 118 f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~-~g~~g~~g~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~ 196 (360)
+.+=...++.-|.+ +.+.+ .|+ +++++. .....+.+.++......+++.+--... ...++.++..+++.
T Consensus 99 sGpG~~N~~~~l~~-A~~~~------vPl--vvItg~~p~~~~~~~~~Q~~d~~~~~~~~tk~~~-~v~~~~~i~~~l~~ 168 (616)
T 2pan_A 99 SGPAGTDMITALYS-ASADS------IPI--LCITGQAPRARLHKEDFQAVDIEAIAKPVSKMAV-TVREAALVPRVLQQ 168 (616)
T ss_dssp STHHHHTSHHHHHH-HHHTT------CCE--EEEEEECCGGGTTTTCTTCCCHHHHHGGGSSEEE-ECCSGGGHHHHHHH
T ss_pred CCchHHHHHHHHHH-HHhcC------CCE--EEEecCCcccccCcccccccCHHHHHHHHHHhhc-ccCCHHHHHHHHHH
Confidence 66544445555553 33332 344 333332 111112333444556788888876644 45667788888887
Q ss_pred hHhC-----CCCEEEeccccc
Q 018167 197 CIRD-----PNPVVFFEPKWL 212 (360)
Q Consensus 197 a~~~-----~~P~~i~~~k~l 212 (360)
|++. ++||+|-.|...
T Consensus 169 A~~~A~~~r~GPV~l~iP~d~ 189 (616)
T 2pan_A 169 AFHLMRSGRPGPVLVDLPFDV 189 (616)
T ss_dssp HHHHHHSSSCCCEEEEEEHHH
T ss_pred HHHHHhcCCCceEEEEcchhh
Confidence 7752 699999877764
No 32
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=92.93 E-value=1.6 Score=44.00 Aligned_cols=162 Identities=14% Similarity=0.103 Sum_probs=84.6
Q ss_pred CCCcccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcC-CCeeEE
Q 018167 36 SGKSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIA 114 (360)
Q Consensus 36 ~~~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~-G~~p~~ 114 (360)
.+.+++..+++.+.|.+.. -+.|+.+-.+- .....+.+.+ . +.+.+=....|+++.-+|-|+|+. |...++
T Consensus 17 ~~~~~~~a~~lv~~L~~~G--V~~vfg~PG~~----~~~l~~al~~-~-~~~~~i~~~~E~~Aa~~A~GyAr~tgkp~v~ 88 (565)
T 2nxw_A 17 RGSHMKLAEALLRALKDRG--AQAMFGIPGDF----ALPFFKVAEE-T-QILPLHTLSHEPAVGFAADAAARYSSTLGVA 88 (565)
T ss_dssp CSCCCBHHHHHHHHHHHTT--CCCEEECCCGG----GHHHHHHHHH-H-CSSCEEECSSHHHHHHHHHHHHHHHTSCEEE
T ss_pred CCCCcCHHHHHHHHHHHcC--CCEEEECCCcc----hHHHHHHHHh-C-CCcEEEecCcHHHHHHHHHHHHHHhCCCeEE
Confidence 3456788888887776532 23344432221 1112334443 3 343333457999999999999997 544444
Q ss_pred EecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCC--CCCCCC-CCCC-c--h-HHHHHcCCCCcEEEeeCCH
Q 018167 115 EIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYG--AVGHGG-HYHS-Q--S-PEAFFCHVPGLKVVIPRSP 187 (360)
Q Consensus 115 ~~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g--~~g~~g-~~Hs-~--~-d~a~~r~iPn~~V~~P~d~ 187 (360)
..|+.+=...++.-|-+ +.+.+ .|+ +++++... ..+.+. .||+ + . ...+++.+-... +...++
T Consensus 89 ~~TsGpG~~N~~~gv~~-A~~~~------vPl--l~itg~~~~~~~~~~~~~~~~~q~~d~q~~~~~~~~k~~-~~v~~~ 158 (565)
T 2nxw_A 89 AVTYGAGAFNMVNAVAG-AYAEK------SPV--VVISGAPGTTEGNAGLLLHHQGRTLDTQFQVFKEITVAQ-ARLDDP 158 (565)
T ss_dssp EECTTHHHHTTHHHHHH-HHHTT------CCE--EEEEEECCTTCC--CCCC-------CHHHHHHTTSCSCE-EECCCT
T ss_pred EECCCCCHHHHHHHHHH-HHhhC------CCE--EEEeCCCChhhhccCcceeeeccchhhHHHHHHhhheEE-EEeCCH
Confidence 44566544444444442 33222 344 33343221 122232 2453 2 2 468888876553 333444
Q ss_pred HHH----HHHHHHhHhCCCCEEEecccccccc
Q 018167 188 RQA----KGLLLSCIRDPNPVVFFEPKWLYRL 215 (360)
Q Consensus 188 ~e~----~~~l~~a~~~~~P~~i~~~k~l~r~ 215 (360)
+++ ..+++.|...++||+|-.|+.+.+.
T Consensus 159 ~~~~~~i~~A~~~A~~~~GPV~l~iP~Dv~~~ 190 (565)
T 2nxw_A 159 AKAPAEIARVLGAARAQSRPVYLEIPRNMVNA 190 (565)
T ss_dssp TTHHHHHHHHHHHHHHHTCCEEEEEEGGGTTC
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEECChhhhcC
Confidence 444 4445545445899999888776544
No 33
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=92.90 E-value=0.4 Score=47.99 Aligned_cols=117 Identities=17% Similarity=0.096 Sum_probs=67.8
Q ss_pred CcEEechhHHHHHHHHHHHHhcC-CCeeEEEecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCC--CCCCCC
Q 018167 86 SRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYG--AVGHGG 162 (360)
Q Consensus 86 ~r~i~~GIaE~~~vg~AaGlA~~-G~~p~~~~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g--~~g~~g 162 (360)
=|++.+ ..|++++.+|.|+|+. |...++..|..+=...++.-|.+ +.+.+ .|+ +++++... ..+.+.
T Consensus 39 i~~i~~-~~E~~Aa~~A~Gyar~tg~~~v~~~tsGpG~~N~~~~l~~-A~~~~------~Pl--l~itg~~~~~~~~~~~ 108 (528)
T 1q6z_A 39 FRYILA-LQEACVVGIADGYAQASRKPAFINLHSAAGTGNAMGALSN-AWNSH------SPL--IVTAGQQTRAMIGVEA 108 (528)
T ss_dssp CEEEEC-SSHHHHHHHHHHHHHHHTSCEEEEEEHHHHHHHTHHHHHH-HHHTT------CCE--EEEEEECCHHHHTTTC
T ss_pred CcEEEE-CcHHHHHHHHHHHHHHhCCCEEEEEcCChHHHHHHHHHHH-HhhcC------CCE--EEEeCCCcccccCCCc
Confidence 366655 6999999999999997 55444443454434445555543 32222 344 23333211 112232
Q ss_pred CCCCchHHHHHcCCCCcEEEeeCCHHHHHHHHHHhHh----C-CCCEEEecccccc
Q 018167 163 HYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIR----D-PNPVVFFEPKWLY 213 (360)
Q Consensus 163 ~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~a~~----~-~~P~~i~~~k~l~ 213 (360)
.+|..+..++++.+... ...+.+++++...++.|+. . +|||+|-.|..+.
T Consensus 109 ~q~~~d~~~~~~~~~k~-~~~v~~~~~~~~~i~~A~~~a~~~~~GPV~l~iP~d~~ 163 (528)
T 1q6z_A 109 LLTNVDAANLPRPLVKW-SYEPASAAEVPHAMSRAIHMASMAPQGPVYLSVPYDDW 163 (528)
T ss_dssp TTCCTTGGGSSTTSCSC-EECCSSGGGHHHHHHHHHHHHHSSSCCCEEEEEEGGGT
T ss_pred ccccccHHHHHHHhhHh-hhcCCCHHHHHHHHHHHHHHHhcCCCCcEEEEechhhh
Confidence 22224667888887765 4455566666555555554 3 6899998887754
No 34
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=92.42 E-value=0.57 Score=47.41 Aligned_cols=153 Identities=14% Similarity=-0.027 Sum_probs=90.0
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEcCCC-CCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcCCCeeEE-Eec
Q 018167 40 LNLYSAINQALHIALETDPRAYVFGEDV-GFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIA-EIQ 117 (360)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~vv~i~~Dl-~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~G~~p~~-~~~ 117 (360)
++..+++.+.|.+.. -+.|+.+-.+- . ....+.+. + =|++.+ ..|+++.-+|-|+|+..-+|.+ ..|
T Consensus 12 ~~~a~~l~~~L~~~G--V~~vfg~PG~~~~----~~l~~al~---~-i~~i~~-~~E~~Aa~~A~Gyar~tg~p~v~~~T 80 (573)
T 2iht_A 12 PTAAHALLSRLRDHG--VGKVFGVVGREAA----SILFDEVE---G-IDFVLT-RHEFTAGVAADVLARITGRPQACWAT 80 (573)
T ss_dssp CCHHHHHHHHHHHTT--CCEEEECCCGGGG----TCCSCSST---T-CEEEEC-SSHHHHHHHHHHHHHHHCSCEEEEEC
T ss_pred ccHHHHHHHHHHHCC--CCEEEEecCCcch----hHHHHHHc---C-CeEEee-CCHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 566777777776532 23344433332 1 11223333 3 477775 6999999999999997445443 335
Q ss_pred CcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCC-CCCC-CCCCCchHHHHHcCCCCcEEEeeCCHHHHHHHHH
Q 018167 118 FADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA-VGHG-GHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLL 195 (360)
Q Consensus 118 f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~-~g~~-g~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~ 195 (360)
+.+=...++.-|.+ +.+.+ .|+ +++++.... .-+. +.+|.....++++.+... .+...+++++...++
T Consensus 81 sGpG~~N~~~~v~~-A~~~~------~Pl--l~itg~~~~~~~~~~~~~Q~~d~~~~~~~~~k~-~~~v~~~~~~~~~i~ 150 (573)
T 2iht_A 81 LGPGMTNLSTGIAT-SVLDR------SPV--IALAAQSESHDIFPNDTHQCLDSVAIVAPMSKY-AVELQRPHEITDLVD 150 (573)
T ss_dssp TTHHHHHHHHHHHH-HHHHT------CCE--EEEEEESCGGGCCTTTSTTCCCHHHHHGGGSSE-EEECCSGGGHHHHHH
T ss_pred cCchHHHHHHHHHH-HHhhC------CCE--EEEcccCcccccCCcCccccCCHHHHHHhHhhE-EEEcCCHHHHHHHHH
Confidence 66645555555553 33222 344 333332221 1122 556667778999988765 445566666766666
Q ss_pred HhHh----C-CCCEEEecccccc
Q 018167 196 SCIR----D-PNPVVFFEPKWLY 213 (360)
Q Consensus 196 ~a~~----~-~~P~~i~~~k~l~ 213 (360)
.|++ . ++||+|-.|..+.
T Consensus 151 ~A~~~A~~~~~GPV~l~iP~dv~ 173 (573)
T 2iht_A 151 SAVNAAMTEPVGPSFISLPVDLL 173 (573)
T ss_dssp HHHHHHTBSSCCCEEEEEEHHHH
T ss_pred HHHHHHhcCCCceEEEEecchHh
Confidence 6664 3 5999998887764
No 35
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=91.99 E-value=0.44 Score=48.15 Aligned_cols=155 Identities=11% Similarity=0.040 Sum_probs=85.3
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcC-CCeeEEEecC
Q 018167 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQF 118 (360)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~-G~~p~~~~~f 118 (360)
++..+++.+.|.+.. -+.|+.+-.+-. ....+.+.+ - .=|++.+ ..|++++.+|-|+|+. |...++..|+
T Consensus 11 ~~~a~~l~~~L~~~G--V~~vfg~PG~~~----~~l~~al~~-~-~i~~v~~-~~E~~Aa~~A~Gyar~tg~p~v~~~Ts 81 (566)
T 1ozh_A 11 AHGADLVVSQLEAQG--VRQVFGIPGAKI----DKVFDSLLD-S-SIRIIPV-RHEANAAFMAAAVGRITGKAGVALVTS 81 (566)
T ss_dssp SCHHHHHHHHHHHHT--CCEEEEECCTTT----HHHHHHGGG-S-SSEEEEC-SSHHHHHHHHHHHHHHHSSCEEEEECS
T ss_pred CcHHHHHHHHHHHCC--CCEEEEcCCCch----HHHHHHHHh-C-CCcEEEe-CCHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 344666766666542 233444433311 112233333 1 2477776 7999999999999997 5444444466
Q ss_pred cccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCC-CCCCCCCchHHHHHcCCCCcEEEeeCCHHHHHHHHHHh
Q 018167 119 ADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVG-HGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSC 197 (360)
Q Consensus 119 ~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g-~~g~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~a 197 (360)
.+=...++.-|.+ +-+.+ .|+ +++++...... +.+.+|.....++++.+... .+...+++++...++.|
T Consensus 82 GpG~~N~~~~l~~-A~~~~------vPl--l~itg~~~~~~~~~~~~Q~~d~~~~~~~~tk~-~~~v~~~~~~~~~i~~A 151 (566)
T 1ozh_A 82 GPGCSNLITGMAT-ANSEG------DPV--VALGGAVKRADKAKQVHQSMDTVAMFSPVTKY-AIEVTAPDALAEVVSNA 151 (566)
T ss_dssp THHHHTTHHHHHH-HHHHT------CCE--EEEEEECCTTTC------CCCHHHHHGGGCSE-EEECCSGGGHHHHHHHH
T ss_pred ChHHHHHHHHHHH-HHhcC------CCE--EEEeCCCccccCCCCcccccCHHHHHHHHhhe-EEEcCCHHHHHHHHHHH
Confidence 6544444444442 33222 344 33333222211 22345556778999988765 44556677666666665
Q ss_pred Hh----C-CCCEEEecccccc
Q 018167 198 IR----D-PNPVVFFEPKWLY 213 (360)
Q Consensus 198 ~~----~-~~P~~i~~~k~l~ 213 (360)
+. . ++||+|-.|..+.
T Consensus 152 ~~~A~~~r~GPV~l~iP~dv~ 172 (566)
T 1ozh_A 152 FRAAEQGRPGSAFVSLPQDVV 172 (566)
T ss_dssp HHHHHSSSCCEEEEEEEHHHH
T ss_pred HHHHhcCCCCeEEEEeChhhh
Confidence 54 3 5999998887754
No 36
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=91.78 E-value=2.1 Score=43.04 Aligned_cols=155 Identities=12% Similarity=0.004 Sum_probs=84.4
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcC-CCeeEEEecC
Q 018167 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQF 118 (360)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~-G~~p~~~~~f 118 (360)
++..+++.+.|.+. +=+.++..+... .....+.+.+. +.=|++.+ ..|++++.+|.|+|+. | ..++..|+
T Consensus 3 ~~~a~~l~~~L~~~---GV~~vfg~PG~~---~~~l~~al~~~-~~i~~v~~-~~E~~Aa~~A~Gyar~tg-~~v~~~Ts 73 (566)
T 2vbi_A 3 YTVGMYLAERLVQI---GLKHHFAVAGDY---NLVLLDQLLLN-KDMKQIYC-CNELNCGFSAEGYARSNG-AAAAVVTF 73 (566)
T ss_dssp CBHHHHHHHHHHHH---TCSEEEECCCTT---THHHHHHHHTC-TTSEEEEC-SSHHHHHHHHHHHHHHHS-CEEEEECT
T ss_pred cCHHHHHHHHHHHc---CCCEEEeCCCCc---cHHHHHHHhcC-CCCeEEee-CcHHHHHHHHHHHHhhcC-CeEEEEeC
Confidence 45667777766654 334444433311 11112333322 11367765 6999999999999996 8 55555567
Q ss_pred cccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCC--CCCCC-CCCCc------hHHHHHcCCCCcEEEeeCCHHH
Q 018167 119 ADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA--VGHGG-HYHSQ------SPEAFFCHVPGLKVVIPRSPRQ 189 (360)
Q Consensus 119 ~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~--~g~~g-~~Hs~------~d~a~~r~iPn~~V~~P~d~~e 189 (360)
.+=...++.-|-+ +.+.+ .|+ +++++.... .+.+. .||.. ....+++.+--. .+.+.++++
T Consensus 74 GpG~~N~~~gia~-A~~~~------vPl--l~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~tk~-~~~v~~~~~ 143 (566)
T 2vbi_A 74 SVGAISAMNALGG-AYAEN------LPV--ILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCA-AESITDAHS 143 (566)
T ss_dssp TTTHHHHHHHHHH-HHHTT------CCE--EEEEEECCGGGTTTTCBCTTSCSSSCCTHHHHHHHTTCSE-EEEECSSSS
T ss_pred CCCHHHHHHHHHH-HHhhC------CCE--EEEECCCChHHhccCceeeeeccCcchHHHHHHHhhhEeE-EEEeCCHHH
Confidence 7655555555553 33222 344 233332221 22222 24421 346888888654 334444444
Q ss_pred HHH----HHHHhHhCCCCEEEecccccc
Q 018167 190 AKG----LLLSCIRDPNPVVFFEPKWLY 213 (360)
Q Consensus 190 ~~~----~l~~a~~~~~P~~i~~~k~l~ 213 (360)
+.. +++.|...++||+|-.|..+.
T Consensus 144 ~~~~l~~A~~~a~~~~GPV~l~iP~d~~ 171 (566)
T 2vbi_A 144 APAKIDHVIRTALRERKPAYLDIACNIA 171 (566)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEETTTT
T ss_pred HHHHHHHHHHHHHhCCCCEEEEechhhc
Confidence 444 444444457999998887654
No 37
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=91.77 E-value=0.42 Score=48.58 Aligned_cols=156 Identities=12% Similarity=-0.011 Sum_probs=89.1
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcC-CCeeEEEecC
Q 018167 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQF 118 (360)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~-G~~p~~~~~f 118 (360)
++..+++.+.|.+ .+=+.++..+... .....+.+.+ .+.=|++.+ ..|++++.+|.|+|+. |...++..++
T Consensus 12 ~~~a~~l~~~L~~---~GV~~vfg~PG~~---~~~l~~al~~-~~~i~~i~~-~~E~~Aa~~A~Gyar~tg~p~v~~~Ts 83 (590)
T 1ybh_A 12 RKGADILVEALER---QGVETVFAYPGGA---SMEIHQALTR-SSSIRNVLP-RHEQGGVFAAEGYARSSGKPGICIATS 83 (590)
T ss_dssp EEHHHHHHHHHHT---TTCCEEEECCCGG---GHHHHHHHHH-CSSCEECCC-SSHHHHHHHHHHHHHHHSSCEEEEECT
T ss_pred ccHHHHHHHHHHH---cCCCEEEEcCCCc---hHHHHHHHhc-cCCccEEee-CCHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 4556666665544 3334444433211 1111233332 212366665 6999999999999997 5544444456
Q ss_pred cccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCC-CCCCCCCCCCchHHHHHcCCCCcEEEeeCCHHHHHHHHHHh
Q 018167 119 ADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYG-AVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSC 197 (360)
Q Consensus 119 ~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g-~~g~~g~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~a 197 (360)
.+=...++.-|-+ +...+ .|+ +++++... ..-+.+.++.....++++.+-.. .+...+++++..+++.|
T Consensus 84 GpG~~N~~~gv~~-A~~~~------vPl--l~itg~~~~~~~g~~~~Q~~d~~~~~~~~~k~-~~~v~~~~~i~~~l~~A 153 (590)
T 1ybh_A 84 GPGATNLVSGLAD-ALLDS------VPL--VAITGQVPRRMIGTDAFQETPIVEVTRSITKH-NYLVMDVEDIPRIIEEA 153 (590)
T ss_dssp THHHHTTHHHHHH-HHHHT------CCE--EEEEEECCGGGTTTTCTTCCCHHHHHGGGSSE-EEECCCGGGHHHHHHHH
T ss_pred CchHHHHHHHHHH-HHhhC------CCE--EEEeCcCCccccCCCcccccCHHHHHHHHhCe-EEecCCHHHHHHHHHHH
Confidence 6544444444442 22222 344 23333221 11123344556677899988776 55667788888888888
Q ss_pred HhC-----CCCEEEecccccc
Q 018167 198 IRD-----PNPVVFFEPKWLY 213 (360)
Q Consensus 198 ~~~-----~~P~~i~~~k~l~ 213 (360)
++. +|||+|-.|..+.
T Consensus 154 ~~~a~~~~~GPV~l~iP~dv~ 174 (590)
T 1ybh_A 154 FFLATSGRPGPVLVDVPKDIQ 174 (590)
T ss_dssp HHHHHSSSCCEEEEEEEHHHH
T ss_pred HHHHhhCCCceEEEEeCcchh
Confidence 762 6999998887653
No 38
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=91.14 E-value=1.9 Score=43.89 Aligned_cols=160 Identities=9% Similarity=-0.021 Sum_probs=84.5
Q ss_pred CcccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcC-CCeeEEEe
Q 018167 38 KSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEI 116 (360)
Q Consensus 38 ~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~-G~~p~~~~ 116 (360)
.+++..+++.+.|.+. .=+.++..+.- .....++.|.+.-+.=|++.+ .-|+++.-+|-|+|+. |...++..
T Consensus 9 ~~~~~a~~l~~~L~~~---GV~~vfg~PG~---~~~~l~dal~~~~~~i~~i~~-~hE~~Aa~aA~GyAr~tg~~gv~~~ 81 (603)
T 4feg_A 9 TNILAGAAVIKVLEAW---GVDHLYGIPGG---SINSIMDALSAERDRIHYIQV-RHEEVGAMAAAADAKLTGKIGVCFG 81 (603)
T ss_dssp CEEEHHHHHHHHHHHT---TCCEEEECCCG---GGHHHHHHHHHTTTTSEEEEC-SSHHHHHHHHHHHHHHHSSCEEEEE
T ss_pred CeeeHHHHHHHHHHHC---CCCEEEEeCCC---chHHHHHHHHhccCCCeEEEe-cChHHHHHHHHHHHHHhCCceEEEe
Confidence 3466777777766543 33334433321 111123344432111377766 6999999999999987 54444434
Q ss_pred cCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCC-CCCCCCCCCchHHHHHcCCCCcEEEeeCCHHHHHH---
Q 018167 117 QFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA-VGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKG--- 192 (360)
Q Consensus 117 ~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~-~g~~g~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~--- 192 (360)
|+.+=...++.-|-+ +.+.+ .|+ +++++.... .-..+..+......+++.+--... ...+++++..
T Consensus 82 TsGpG~~N~~~gia~-A~~~~------vPv--l~itG~~~~~~~~~~~~Q~~d~~~~~~~~tk~~~-~v~~~~~~~~~i~ 151 (603)
T 4feg_A 82 SAGPGGTHLMNGLYD-AREDH------VPV--LALIGQFGTTGMNMDTFQEMNENPIYADVADYNV-TAVNAATLPHVID 151 (603)
T ss_dssp CTTHHHHTTHHHHHH-HHHTT------CCE--EEEEEECCTTTTTSCCTTCCCCGGGGTTTCSEEE-ECCCSTTHHHHHH
T ss_pred cCCchHHHHHHHHHH-HHHcC------CCE--EEEecCCcccccCCCccccccHHHHhhhhceEEE-EcCCHHHHHHHHH
Confidence 666644444444542 33222 344 223332211 112233344555688888765433 3334444444
Q ss_pred -HHHHhHhCCCCEEEeccccccc
Q 018167 193 -LLLSCIRDPNPVVFFEPKWLYR 214 (360)
Q Consensus 193 -~l~~a~~~~~P~~i~~~k~l~r 214 (360)
+++.|...++||+|-.|..+..
T Consensus 152 ~A~~~A~~~~GPV~l~iP~dv~~ 174 (603)
T 4feg_A 152 EAIRRAYAHQGVAVVQIPVDLPW 174 (603)
T ss_dssp HHHHHHHHHTSEEEEEEETTGGG
T ss_pred HHHHHHhcCCCCEEEEeChhhhh
Confidence 4455554589999988876543
No 39
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=90.66 E-value=2.5 Score=42.47 Aligned_cols=115 Identities=13% Similarity=0.127 Sum_probs=70.0
Q ss_pred cEEechhHHHHHHHHHHHHhcC-CCeeEEEecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCC-CCCCCCC
Q 018167 87 RVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA-VGHGGHY 164 (360)
Q Consensus 87 r~i~~GIaE~~~vg~AaGlA~~-G~~p~~~~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~-~g~~g~~ 164 (360)
|++- ..-||++.-+|-|+|+. |...++..|+.+=...++.-|-+ +-+.+ .|+ +++++.... .-+.+.+
T Consensus 48 ~~i~-~~hE~~Aa~~AdGyAr~tG~pgv~~~TsGpG~~N~~~gia~-A~~d~------vPl--l~itG~~~~~~~g~~~~ 117 (556)
T 3hww_A 48 IHHT-HFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIE-AGLTG------EKL--ILLTADRPPELIDCGAN 117 (556)
T ss_dssp EEEE-CSCHHHHHHHHHHHHHHHCSCEEEEECSSHHHHTTHHHHHH-HHHHC------CCE--EEEEEECCGGGSSSSCT
T ss_pred eEEE-ecCCcHHHHHHHHHHHhhCCCEEEEECCCcHHHhhhHHHHH-HHHhC------CCe--EEEeCCCCHHHhccCCC
Confidence 6665 35899999999999996 65444444666644444444442 32222 244 233332211 1123345
Q ss_pred CCchHHHHHcCCCCcEEEe--eCC---HHHHHHHHHHhHhC--CCCEEEecccc
Q 018167 165 HSQSPEAFFCHVPGLKVVI--PRS---PRQAKGLLLSCIRD--PNPVVFFEPKW 211 (360)
Q Consensus 165 Hs~~d~a~~r~iPn~~V~~--P~d---~~e~~~~l~~a~~~--~~P~~i~~~k~ 211 (360)
|.....++++.+-....-. |.+ +.++..+++.|+.. +|||+|-.|+.
T Consensus 118 Q~~d~~~~~~~~tk~~~~v~~~~~~~~~~~i~~~i~~A~~~~r~GPV~i~iP~d 171 (556)
T 3hww_A 118 QAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHAGGVHINCPFA 171 (556)
T ss_dssp TCCCCTTTTTTCSSEEEECCCCCTTSCHHHHHHHHHHHHHSCCSSCEEEEEECC
T ss_pred ccccHHHHHhhheeEEEecCCCcccccHHHHHHHHHHHHhcCCCCCEEEeCCcC
Confidence 5566678888877654443 332 45688899999864 69999988874
No 40
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=90.55 E-value=0.66 Score=47.12 Aligned_cols=156 Identities=12% Similarity=-0.011 Sum_probs=86.1
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcC-CCeeEEEecC
Q 018167 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQF 118 (360)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~-G~~p~~~~~f 118 (360)
++..+++.+.|.+.. -+.|+.+-.+-. ....+.+.+.-+.=|++.+ ..|++++-+|-|+|+. |...++..|+
T Consensus 4 ~~~a~~l~~~L~~~G--V~~vfg~PG~~~----~~l~~al~~~~~~i~~v~~-~hE~~Aa~~A~GyAr~tg~p~v~~~Ts 76 (589)
T 2pgn_A 4 KRGADLIVEALEEYG--TEQVVGFIGHTS----HFVADAFSKSHLGKRVINP-ATELGGAWMVNGYNYVKDRSAAVGAWH 76 (589)
T ss_dssp EEHHHHHHHHHHHTT--CCEEEEECSGGG----HHHHHHHHTSTTSTTCBCC-SSHHHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred CcHHHHHHHHHHHcC--CCEEEEecCCch----HHHHHHHHhcCCCCeEEEe-CcHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 455666666665432 234444433311 1112333321011366666 6999999999999997 5433433356
Q ss_pred cccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCC-CCCCC-CCCCchHHHHHcCCCCcEEEeeCCHHHHHHHHHH
Q 018167 119 ADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA-VGHGG-HYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLS 196 (360)
Q Consensus 119 ~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~-~g~~g-~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~ 196 (360)
.+-...++.-|.+ +-+.+ .|+ +++++.... .-..+ .+|..+..+ ++.+... .+...+++++...++.
T Consensus 77 GpG~~N~~~gv~~-A~~~~------vPl--l~itg~~~~~~~~~~~~~Q~~d~~~-~~~~tk~-~~~v~~~~~~~~~i~~ 145 (589)
T 2pgn_A 77 CVGNLLLHAAMQE-ARTGR------IPA--VHIGLNSDGRLAGRSEAAQQVPWQS-FTPIARS-TQRVERLDKVGEAIHE 145 (589)
T ss_dssp GGGGGGCHHHHHH-HHHTT------CCE--EEEEEESCGGGTTCTTCSSCCCGGG-GTTTSSE-EEECCSGGGHHHHHHH
T ss_pred CchHHHHHHHHHH-HHhcC------CCE--EEEecCCcccccCCCCcccccChhh-ccccEEE-EeecCCHHHHHHHHHH
Confidence 6655455555543 33222 344 333332221 12234 566666677 8888765 4455667767666666
Q ss_pred hHh----C-CCCEEEecccccc
Q 018167 197 CIR----D-PNPVVFFEPKWLY 213 (360)
Q Consensus 197 a~~----~-~~P~~i~~~k~l~ 213 (360)
|+. . ++||+|-.|..+.
T Consensus 146 A~~~A~~~~~GPV~l~iP~dv~ 167 (589)
T 2pgn_A 146 AFRVAEGHPAGPAYVDIPFDLT 167 (589)
T ss_dssp HHHHHTSSSCCEEEEEEETHHH
T ss_pred HHHHHhcCCCccEEEEeCHhhh
Confidence 664 3 5999998887753
No 41
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=90.53 E-value=0.93 Score=46.99 Aligned_cols=152 Identities=13% Similarity=0.044 Sum_probs=87.2
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhC--C-CcEEechhHHHHHHHHHHHHhcC-CCeeEEE
Q 018167 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFG--K-SRVFNTPLCEQGIVGFAIGLAAM-GNRAIAE 115 (360)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~g--p-~r~i~~GIaE~~~vg~AaGlA~~-G~~p~~~ 115 (360)
++..+++.+.|.+ .+=+.++..+. + ....|.+.+- + =|++.+ .-|++++.+|-|+|+. |...++.
T Consensus 82 ~~~a~~lv~~L~~---~GV~~vFg~PG----~---~~~pl~dal~~~~~i~~v~~-~hE~~Aa~aAdGyAr~tGkpgvv~ 150 (677)
T 1t9b_A 82 LTGGQIFNEMMSR---QNVDTVFGYPG----G---AILPVYDAIHNSDKFNFVLP-KHEQGAGHMAEGYARASGKPGVVL 150 (677)
T ss_dssp CBHHHHHHHHHHH---TTCCEEEECCC----G---GGHHHHHHTTTCSSSEEECC-SSHHHHHHHHHHHHHHHSSCEEEE
T ss_pred CCHHHHHHHHHHH---cCCCEEEEecC----c---cHHHHHHHHHhCCCCeEEEe-CChHHHHHHHHHHHHHHCCCEEEE
Confidence 4556666666554 33344444332 1 1233443331 1 366665 7999999999999997 5544444
Q ss_pred ecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCC-CCCCCCCCCchHHHHHcCCCCcEEEeeCCHHHHHHHH
Q 018167 116 IQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA-VGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLL 194 (360)
Q Consensus 116 ~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~-~g~~g~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l 194 (360)
.|+.+=...++.-|-+ +-+.+ .|+ |++++.... .-..+.++..+..++++.+-... +...+++++...+
T Consensus 151 ~TsGpG~~N~~~gia~-A~~d~------vPl--lvItG~~~~~~~g~~a~Q~~Dq~~i~~~~tk~~-~~v~~~~~i~~~i 220 (677)
T 1t9b_A 151 VTSGPGATNVVTPMAD-AFADG------IPM--VVFTGQVPTSAIGTDAFQEADVVGISRSCTKWN-VMVKSVEELPLRI 220 (677)
T ss_dssp ECSTHHHHTTHHHHHH-HHHHT------CCE--EEEEEECCTTTTTSCCTTCCCHHHHTGGGSSEE-EECCSGGGHHHHH
T ss_pred ECCChHHHHHHHHHHH-HHHcC------CCE--EEEeCCCChhhcCCCCccccCHHHHhhhheeEE-EEcCCHHHHHHHH
Confidence 4676644444444543 33222 344 333332221 11233445566778888877664 4456777887777
Q ss_pred HHhHh-----CCCCEEEeccccc
Q 018167 195 LSCIR-----DPNPVVFFEPKWL 212 (360)
Q Consensus 195 ~~a~~-----~~~P~~i~~~k~l 212 (360)
+.|++ .+|||+|-.|+.+
T Consensus 221 ~~A~~~A~~grpGPV~l~lP~Dv 243 (677)
T 1t9b_A 221 NEAFEIATSGRPGPVLVDLPKDV 243 (677)
T ss_dssp HHHHHHHHSSSCCEEEEEEEHHH
T ss_pred HHHHHHHhhCCCceEEEEcCHHH
Confidence 77776 2699999888654
No 42
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=90.11 E-value=1.4 Score=44.39 Aligned_cols=155 Identities=14% Similarity=0.026 Sum_probs=84.9
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcC-CCeeEEEecC
Q 018167 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQF 118 (360)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~-G~~p~~~~~f 118 (360)
++..+++.+.|.+ .+=+.++..+... .....+.+.+.- .=|++.+ ..|++++.+|-|+|+. | ..++..|+
T Consensus 3 ~~~a~~l~~~L~~---~GV~~vfg~PG~~---~~~l~~al~~~~-~i~~i~~-~~E~~Aa~~A~Gyar~tg-~~v~~~Ts 73 (568)
T 2wvg_A 3 YTVGTYLAERLVQ---IGLKHHFAVAGDY---NLVLLDNLLLNK-NMEQVYC-CNELNCGFSAEGYARAKG-AAAAVVTY 73 (568)
T ss_dssp EEHHHHHHHHHHH---TTCSEEEECCCTT---THHHHHHHHTCT-TSEEEEC-SSHHHHHHHHHHHHHHHS-CEEEEECT
T ss_pred cCHHHHHHHHHHH---cCCCEEEeCCCCc---cHHHHHHHhccC-CceEecc-CcHHHHHHHHHHHHHhhC-CeEEEEeC
Confidence 4555666666554 3344444443311 111123333221 2467776 7999999999999986 8 44444467
Q ss_pred cccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCC--CCCCC-CCCC------chHHHHHcCCCCcEEEeeCCHHH
Q 018167 119 ADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA--VGHGG-HYHS------QSPEAFFCHVPGLKVVIPRSPRQ 189 (360)
Q Consensus 119 ~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~--~g~~g-~~Hs------~~d~a~~r~iPn~~V~~P~d~~e 189 (360)
.+=..-++.-|.+ +.+.+ .|+ +++++.... .+.+. .||. +....+++.+--. .+.+.++++
T Consensus 74 GpG~~N~~~gia~-A~~~~------vPl--l~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~tk~-~~~v~~~~~ 143 (568)
T 2wvg_A 74 SVGALSAFDAIGG-AYAEN------LPV--ILISGAPNNNDHAAGHVLHHALGKTDYHYQLEMAKNITAA-AEAIYTPEE 143 (568)
T ss_dssp TTTHHHHHHHHHH-HHHTT------CCE--EEEEEECCGGGTTTTCBCTTSCSSSCCCHHHHHHTTSCSC-EEEECSGGG
T ss_pred CCCHHHHHHHHHH-HhhhC------CCE--EEEeCCCChhHhccCcceeeeccccchHHHHHHHHhhEeE-EEEeCCHHH
Confidence 7655555555653 33222 344 233332221 22222 2442 2347889988766 444556665
Q ss_pred HHHHHHHhH----hCCCCEEEecccccc
Q 018167 190 AKGLLLSCI----RDPNPVVFFEPKWLY 213 (360)
Q Consensus 190 ~~~~l~~a~----~~~~P~~i~~~k~l~ 213 (360)
+...++.|+ ..++||+|-.|..+.
T Consensus 144 ~~~~l~~A~~~A~~~~GPV~l~iP~dv~ 171 (568)
T 2wvg_A 144 APAKIDHVIKTALREKKPVYLEIACNIA 171 (568)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEGGGT
T ss_pred HHHHHHHHHHHHHhCCCCEEEEechhHh
Confidence 555555444 447999998887754
No 43
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=89.92 E-value=2.1 Score=43.52 Aligned_cols=117 Identities=16% Similarity=0.101 Sum_probs=66.3
Q ss_pred CcEEechhHHHHHHHHHHHHhcCCCee-EEEecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCC-CCCCCC
Q 018167 86 SRVFNTPLCEQGIVGFAIGLAAMGNRA-IAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA-VGHGGH 163 (360)
Q Consensus 86 ~r~i~~GIaE~~~vg~AaGlA~~G~~p-~~~~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~-~g~~g~ 163 (360)
=|++.+ .-|+++.-+|-|+|+..-+| ++..|+.+=...++.-|-+ +-+.+ .|+ +++++.... .-+-+.
T Consensus 70 i~~i~~-~hE~~Aa~aA~GyAr~tgkpgv~~~TsGpG~~N~~~gia~-A~~~~------vPl--v~ItG~~~~~~~g~~~ 139 (604)
T 2x7j_A 70 ISVHVQ-IDERSAGFFALGLAKAKQRPVLLICTSGTAAANFYPAVVE-AHYSR------VPI--IVLTADRPHELREVGA 139 (604)
T ss_dssp CEEEEC-SSHHHHHHHHHHHHHHHTSCEEEEECSSHHHHTTHHHHHH-HHHHT------CCE--EEEEEECCGGGSSSCC
T ss_pred ceEEEe-cChHHHHHHHHHHHHhhCCCEEEEECChhHHHHHHHHHHH-HhhcC------CCE--EEEeCCCCHHHhCCCC
Confidence 477776 79999999999999974444 4444666644444444442 32222 344 233332211 111233
Q ss_pred CCCchHHHHHcCCCCcEE--EeeCC--------HHHHHHHHHHhHh-CCCCEEEeccccc
Q 018167 164 YHSQSPEAFFCHVPGLKV--VIPRS--------PRQAKGLLLSCIR-DPNPVVFFEPKWL 212 (360)
Q Consensus 164 ~Hs~~d~a~~r~iPn~~V--~~P~d--------~~e~~~~l~~a~~-~~~P~~i~~~k~l 212 (360)
++.....++++.+-.... -.|.+ +..+..+++.|.. .++||+|-.|...
T Consensus 140 ~Q~~d~~~~~~~~tk~~~~v~~~~~~~~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d~ 199 (604)
T 2x7j_A 140 PQAINQHFLFGNFVKFFTDSALPEESPQMLRYIRTLASRAAGEAQKRPMGPVHVNVPLRE 199 (604)
T ss_dssp TTCCCCTTTTGGGSSCEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECCS
T ss_pred CCcCcHHHHhhhheeeeeecCCCcccchhHHHHHHHHHHHHHHhhCCCCCcEEEEcccCc
Confidence 444555677777655433 33444 3345555555555 4799999888764
No 44
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=89.88 E-value=0.46 Score=48.03 Aligned_cols=157 Identities=13% Similarity=0.024 Sum_probs=87.8
Q ss_pred CcccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcC-CCeeEEEe
Q 018167 38 KSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEI 116 (360)
Q Consensus 38 ~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~-G~~p~~~~ 116 (360)
.+++..+++.+.|.+.. -+.|+.+-.+ . .....+.+.+ . .=|++.+ ..|+++.-+|-|+|+. |...++..
T Consensus 8 ~~~~~a~~l~~~L~~~G--V~~vfg~PG~-~---~~~l~~al~~-~-~i~~i~~-~~E~~Aa~~A~GyAr~tg~pgv~~~ 78 (568)
T 2c31_A 8 ELTDGFHVLIDALKMND--IDTMYGVVGI-P---ITNLARMWQD-D-GQRFYSF-RHEQHAGYAASIAGYIEGKPGVCLT 78 (568)
T ss_dssp CEEEHHHHHHHHHHHTT--CCEEEECCCT-T---THHHHHHHHH-T-TCEEEEC-SSHHHHHHHHHHHHHHHSSCEEEEE
T ss_pred CcccHHHHHHHHHHHcC--CCEEEEeCCC-c---cHHHHHHHHh-C-CCcEEEe-CcHHHHHHHHHHHHHHhCCCEEEEE
Confidence 34677777777776532 2334443332 1 1112233433 3 3577776 7999999999999998 54334444
Q ss_pred cCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCC--CCC-CCCCCCchHHHHHcCCCCcEEEeeCCHHHHHHH
Q 018167 117 QFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA--VGH-GGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGL 193 (360)
Q Consensus 117 ~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~--~g~-~g~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~ 193 (360)
|+.+=...++.-|-+ +-+.+ .|+ +++++.... .+. .+..+.++...+++.+-... +...+++++...
T Consensus 79 TsGpG~~N~~~~i~~-A~~~~------vPl--l~itg~~~~~~~~~~~~~~Q~~dq~~~~~~~tk~~-~~v~~~~~~~~~ 148 (568)
T 2c31_A 79 VSAPGFLNGVTSLAH-ATTNC------FPM--ILLSGSSEREIVDLQQGDYEEMDQMNVARPHCKAS-FRINSIKDIPIG 148 (568)
T ss_dssp CSHHHHHHHHHHHHH-HHHHT------CCE--EEEEEECCHHHHHTTCCCTTCCCHHHHSGGGSSEE-EECCSGGGHHHH
T ss_pred cCCccHHHHHHHHHH-HHhcC------CCE--EEEccCCCccccCCCCCcccccCHHHHHHhhhhee-eecCCHHHHHHH
Confidence 566544555555543 33222 344 233332111 111 24455566678888877653 344555555555
Q ss_pred HHHhHh-----CCCCEEEecccccc
Q 018167 194 LLSCIR-----DPNPVVFFEPKWLY 213 (360)
Q Consensus 194 l~~a~~-----~~~P~~i~~~k~l~ 213 (360)
++.|+. .+|||+|-.|..+.
T Consensus 149 i~~A~~~A~~~~~GPV~l~iP~dv~ 173 (568)
T 2c31_A 149 IARAVRTAVSGRPGGVYVDLPAKLF 173 (568)
T ss_dssp HHHHHHHHHSSSCCEEEEEEETHHH
T ss_pred HHHHHHHhcCCCCceEEEeCCHHHh
Confidence 555544 47999998888764
No 45
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=89.44 E-value=0.54 Score=47.44 Aligned_cols=155 Identities=14% Similarity=0.024 Sum_probs=86.0
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcCCCee-EEEecC
Q 018167 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRA-IAEIQF 118 (360)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~G~~p-~~~~~f 118 (360)
++..+++.+.|.+. +=+.++..+... .....+.+.+ - .=|++.+ ..|+++.-+|-|+|+..-+| ++..|+
T Consensus 8 ~~~a~~l~~~L~~~---GV~~vfg~PG~~---~~~l~~al~~-~-~i~~i~~-~hE~~Aa~~A~Gyar~tg~pgv~~~Ts 78 (564)
T 2q28_A 8 TDGMHIIVEALKQN---NIDTIYGVVGIP---VTDMARHAQA-E-GIRYIGF-RHEQSAGYAAAASGFLTQKPGICLTVS 78 (564)
T ss_dssp EEHHHHHHHHHHHT---TCCEEEECCCTT---THHHHHHHHH-T-TCEEEEC-SSHHHHHHHHHHHHHHHSSCEEEEECS
T ss_pred CcHHHHHHHHHHHc---CCCEEEECCCcc---hHHHHHHHHh-C-CCcEEee-CCHHHHHHHHHHHHHHhCCCEEEEEcc
Confidence 56677776666553 333344333211 1112233433 2 3577776 79999999999999984444 444456
Q ss_pred cccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCC--CC-CCCCCCchHHHHHcCCCCcEEEeeCCHHHHHHHHH
Q 018167 119 ADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV--GH-GGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLL 195 (360)
Q Consensus 119 ~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~--g~-~g~~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~ 195 (360)
.+=...++.-|-+ +-+.+ .|+ +++++..... +. .|..+.++...+++.+-.... ...+++++...++
T Consensus 79 GpG~~N~~~gi~~-A~~~~------vPl--l~itg~~~~~~~~~~~~~~Q~~dq~~~~~~~tk~~~-~v~~~~~~~~~i~ 148 (564)
T 2q28_A 79 APGFLNGLTALAN-ATVNG------FPM--IMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAF-RVNQPQDLGIALA 148 (564)
T ss_dssp HHHHHHHHHHHHH-HHHHT------CCE--EEEEEECCHHHHHTTSCCTTCCCHHHHHGGGSSEEE-ECCSGGGHHHHHH
T ss_pred CchHHHHHHHHHH-HHhcC------CCE--EEEeCCCCccccCCCCCccccccHHHHHHHhhheee-ecCCHHHHHHHHH
Confidence 6544455554543 33222 344 2333322111 11 244555667788988876543 3345555555555
Q ss_pred HhHh-----CCCCEEEecccccc
Q 018167 196 SCIR-----DPNPVVFFEPKWLY 213 (360)
Q Consensus 196 ~a~~-----~~~P~~i~~~k~l~ 213 (360)
.|+. .+|||+|-.|..+.
T Consensus 149 ~A~~~A~~~~~GPV~l~iP~dv~ 171 (564)
T 2q28_A 149 RAIRVSVSGRPGGVYLDLPANVL 171 (564)
T ss_dssp HHHHHHHSSSCCEEEEEEEHHHH
T ss_pred HHHHHHhcCCCceEEEEcCHHHh
Confidence 5544 37999998888754
No 46
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=87.78 E-value=1 Score=46.65 Aligned_cols=151 Identities=12% Similarity=0.082 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechh--HHHHHHHHHHHHhcC-CCeeEEEecCc
Q 018167 43 YSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPL--CEQGIVGFAIGLAAM-GNRAIAEIQFA 119 (360)
Q Consensus 43 r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GI--aE~~~vg~AaGlA~~-G~~p~~~~~f~ 119 (360)
...+...|.+.+...++-++++.|++.-..+ ....|.-.. |.+|+..|. +=-..++.|.|+|+. .-++++++ ..
T Consensus 463 ~~~v~~~L~~~l~~~~~~~iv~~~vg~~~~~-~~~~~~~~~-p~~~~~sg~~G~mG~~lpaAiGaalA~p~~~Vv~i-~G 539 (677)
T 1t9b_A 463 PQTVIKKLSKVANDTGRHVIVTTGVGQHQMW-AAQHWTWRN-PHTFITSGGLGTMGYGLPAAIGAQVAKPESLVIDI-DG 539 (677)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEEECSSHHHHH-HHHHSCCCS-TTCEECCCSSCCTTCHHHHHHHHHHHCTTSEEEEE-EE
T ss_pred HHHHHHHHHHHhhcCCCCEEEEeCCchHHHH-HHHhcccCC-CCeEEeCCCcchhhchHHHHHHHHHhCCCCeEEEE-Ee
Confidence 3456667777765423334455665410001 011111123 678988764 112256788888775 23555554 44
Q ss_pred c--cHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCC----------CC--CCCCCCchHH-HHHcCCCCcEEEee
Q 018167 120 D--YIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV----------GH--GGHYHSQSPE-AFFCHVPGLKVVIP 184 (360)
Q Consensus 120 ~--F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~----------g~--~g~~Hs~~d~-a~~r~iPn~~V~~P 184 (360)
+ |.+ .+..+-+ ++..+ +|+ .+|+...+++. .. .++.....|+ .+.+++ |+..+..
T Consensus 540 DGsf~~-~~~eL~t-a~~~~------l~v-~ivV~NN~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~la~a~-G~~~~~v 609 (677)
T 1t9b_A 540 DASFNM-TLTELSS-AVQAG------TPV-KILILNNEEQGMVTQWQSLFYEHRYSHTHQLNPDFIKLAEAM-GLKGLRV 609 (677)
T ss_dssp HHHHHH-HGGGHHH-HHHHT------CCC-EEEEEECSSCHHHHHHHHHHSTTCCCSCCCCCCCHHHHHHHT-TCEEEEE
T ss_pred ehHHhc-cHHHHHH-HHHhC------CCe-EEEEEeCCCchhhhhhhhhhcCCCcccCcCCCCCHHHHHHHc-CCeEEEE
Confidence 4 333 3333432 44444 466 56666554431 01 1111122233 344444 6677777
Q ss_pred CCHHHHHHHHHHhHhCCCCEEE
Q 018167 185 RSPRQAKGLLLSCIRDPNPVVF 206 (360)
Q Consensus 185 ~d~~e~~~~l~~a~~~~~P~~i 206 (360)
.+..|+..+++++++.++|++|
T Consensus 610 ~~~~el~~al~~a~~~~gp~lI 631 (677)
T 1t9b_A 610 KKQEELDAKLKEFVSTKGPVLL 631 (677)
T ss_dssp CSHHHHHHHHHHHHHCSSCEEE
T ss_pred CCHHHHHHHHHHHHHCCCcEEE
Confidence 9999999999999999999988
No 47
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=86.25 E-value=2.9 Score=41.94 Aligned_cols=116 Identities=14% Similarity=0.020 Sum_probs=67.0
Q ss_pred cEEechhHHHHHHHHHHHHhcC-CCeeEEEecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCC--CCC-CC
Q 018167 87 RVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA--VGH-GG 162 (360)
Q Consensus 87 r~i~~GIaE~~~vg~AaGlA~~-G~~p~~~~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~--~g~-~g 162 (360)
|++.+ ..|++++.+|-|+|+. | .+++..|+.+=..-++.-|-+ +.+.+ .|+ +++++.... .+. ..
T Consensus 44 ~~v~~-~~E~~Aa~~A~Gyar~tg-~~v~~~TsGpG~~N~~~gia~-A~~~~------~Pl--l~itg~~~~~~~~~~~~ 112 (563)
T 2vk8_A 44 RWAGN-ANELNAAYAADGYARIKG-MSCIITTFGVGELSALNGIAG-SYAEH------VGV--LHVVGVPSISAQAKQLL 112 (563)
T ss_dssp EECCC-SSHHHHHHHHHHHHHHHS-CEEEEEETTHHHHHHHHHHHH-HHHHT------CCE--EEEEEECCHHHHHTTCC
T ss_pred eEEcc-CchHHHHHHHHHHHHhhC-CcEEEEcCCCcHHHHHHHHHH-HHhhC------CCE--EEEECCCChHHhhcccc
Confidence 56654 7999999999999996 7 555554566544445554543 32222 344 233332111 111 11
Q ss_pred CCCC------chHHHHHcCCCCcEEEeeCCH----HHHHHHHHHhHhCCCCEEEeccccccc
Q 018167 163 HYHS------QSPEAFFCHVPGLKVVIPRSP----RQAKGLLLSCIRDPNPVVFFEPKWLYR 214 (360)
Q Consensus 163 ~~Hs------~~d~a~~r~iPn~~V~~P~d~----~e~~~~l~~a~~~~~P~~i~~~k~l~r 214 (360)
.||. |+...+++.+--.. +...++ ..+..+++.|...++||+|-.|..+..
T Consensus 113 ~~~~~g~~~~q~~~~~~~~~~k~~-~~v~~~~~~~~~i~~A~~~A~~~~GPV~l~iP~d~~~ 173 (563)
T 2vk8_A 113 LHHTLGNGDFTVFHRMSANISETT-AMITDIATAPAEIDRCIRTTYVTQRPVYLGLPANLVD 173 (563)
T ss_dssp CTTSCSSSCSSHHHHHHHTTCSEE-EECCCTTTHHHHHHHHHHHHHHHTSCEEEEEETTGGG
T ss_pred cccccCCcchHHHHHHhhhhEEEE-EEeCCHHHHHHHHHHHHHHHHhCCCCEEEEechhhhc
Confidence 2331 24468888887653 344443 445556666665579999988887643
No 48
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=86.19 E-value=5.2 Score=40.31 Aligned_cols=116 Identities=12% Similarity=0.104 Sum_probs=65.2
Q ss_pred CcEEechhHHHHHHHHHHHHhcC-CCeeEEEecCcccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCC-CCCCCC
Q 018167 86 SRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA-VGHGGH 163 (360)
Q Consensus 86 ~r~i~~GIaE~~~vg~AaGlA~~-G~~p~~~~~f~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~-~g~~g~ 163 (360)
=|++.+ .-||++.-+|-|+|+. |...++..|..+=...++.-|-+ +-+.+ .|+ +++++.... .-+.|.
T Consensus 50 i~~i~~-~hE~~Aa~aAdGyAr~tG~pgv~~~TsGpG~~N~~~gia~-A~~d~------vPl--l~itG~~p~~~~g~~~ 119 (578)
T 3lq1_A 50 LKIYVD-VDERSAGFFALGLAKASKRPVVLLCTSGTAAANYFPAVAE-ANLSQ------IPL--IVLTADRPHELRNVGA 119 (578)
T ss_dssp CEEEEC-SSHHHHHHHHHHHHHHHCCCEEEEECSSHHHHTTHHHHHH-HHHTT------CCE--EEEEEECCGGGTTSSC
T ss_pred ceEEEe-cCcHHHHHHHHHHHHhhCCCEEEEECCchhhhhhhHHHHH-HHhcC------CCe--EEEeCCCCHHhhcCCC
Confidence 477776 5999999999999997 54444444566544444444442 22222 344 223332111 112334
Q ss_pred CCCchHHHHHcCCCCcE--EEeeCCHH--------HHHHHHHHhHhC-CCCEEEecccc
Q 018167 164 YHSQSPEAFFCHVPGLK--VVIPRSPR--------QAKGLLLSCIRD-PNPVVFFEPKW 211 (360)
Q Consensus 164 ~Hs~~d~a~~r~iPn~~--V~~P~d~~--------e~~~~l~~a~~~-~~P~~i~~~k~ 211 (360)
+|.+...++++.+-... |-.|.+.. .+..+++.|... +|||+|-.|..
T Consensus 120 ~Qe~d~~~~~~~~tk~~~~v~~~~~~~~~~~~i~~~l~~A~~~A~~gr~GPV~l~iP~d 178 (578)
T 3lq1_A 120 PQAMDQLHLYGSHVKDFTDMALPENSEEMLRYAKWHGSRAVDIAMKTPRGPVHLNFPLR 178 (578)
T ss_dssp TTCCCCTTTTGGGSSEEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCCEEEEEECC
T ss_pred CCCcCHhhHHhhheeeEeecCCCCCchHHHHHHHHHHHHHHHHhhCCCCCcEEEECccC
Confidence 44455567777765443 33455533 244455555543 79999987764
No 49
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=75.41 E-value=5.5 Score=29.92 Aligned_cols=73 Identities=10% Similarity=0.064 Sum_probs=48.0
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHh-----cCCeEEEEeCCCcCCchH-HHHHHH
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR-----KTGRLLISHEAPVTGGFG-AEISAS 312 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~-----~~~~ivvvEe~~~~GGlg-s~v~~~ 312 (360)
.+|+|.+.-. -..|.+|.+.|++.|++.+.+|+.. |.+...+..+ ++-..|++.++...+|+. .++.+.
T Consensus 4 a~I~vYs~~~-Cp~C~~aK~~L~~~gi~y~~idi~~----d~~~~~~~~~~~~G~~tVP~I~i~Dg~~l~~~~~~el~~~ 78 (92)
T 2lqo_A 4 AALTIYTTSW-CGYCLRLKTALTANRIAYDEVDIEH----NRAAAEFVGSVNGGNRTVPTVKFADGSTLTNPSADEVKAK 78 (92)
T ss_dssp SCEEEEECTT-CSSHHHHHHHHHHTTCCCEEEETTT----CHHHHHHHHHHSSSSSCSCEEEETTSCEEESCCHHHHHHH
T ss_pred CcEEEEcCCC-CHhHHHHHHHHHhcCCceEEEEcCC----CHHHHHHHHHHcCCCCEeCEEEEeCCEEEeCCCHHHHHHH
Confidence 3577776533 4568888899999999999999875 5554433332 223567776655555653 567777
Q ss_pred HHHh
Q 018167 313 ILER 316 (360)
Q Consensus 313 l~~~ 316 (360)
|.+.
T Consensus 79 L~el 82 (92)
T 2lqo_A 79 LVKI 82 (92)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7663
No 50
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=74.91 E-value=4.4 Score=40.72 Aligned_cols=154 Identities=10% Similarity=0.006 Sum_probs=79.8
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcC-CCeeEEEecC
Q 018167 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAM-GNRAIAEIQF 118 (360)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~-G~~p~~~~~f 118 (360)
++..+++.+.|.+ .+=+.++..+... .....+.+.+ .+.=|++.+ ..|++++.+|.|+|+. | ..++..++
T Consensus 25 ~~~a~~l~~~L~~---~GV~~vfg~PG~~---~~~l~~al~~-~~~i~~i~~-~~E~~A~~~A~GyAr~tG-~~v~~~ts 95 (570)
T 2vbf_A 25 YTVGDYLLDRLHE---LGIEEIFGVPGDY---NLQFLDQIIS-REDMKWIGN-ANELNASYMADGYARTKK-AAAFLTTF 95 (570)
T ss_dssp CBHHHHHHHHHHH---TTCCEEEECCCGG---GHHHHHHHHH-CSSCEEEEC-SSHHHHHHHHHHHHHHHS-CEEEEEET
T ss_pred CCHHHHHHHHHHH---cCCCEEEECCCcc---hHHHHHHHhc-CCCCeEECc-CcHHHHHHHHHHHHHHhC-CeEEEEcC
Confidence 3455556555544 3344444433311 1111233332 212366665 6999999999999965 8 54444456
Q ss_pred cccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCC--CCCCC-CCCC------chHHHHHcCCCCcEEEeeCCHHH
Q 018167 119 ADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA--VGHGG-HYHS------QSPEAFFCHVPGLKVVIPRSPRQ 189 (360)
Q Consensus 119 ~~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~--~g~~g-~~Hs------~~d~a~~r~iPn~~V~~P~d~~e 189 (360)
.+-..-++.-|.+ +...+ .|+ +++++.... .+.+. .||. ++...+++.+.-.....+ + ++
T Consensus 96 GpG~~N~~~gi~~-A~~~~------vPl--v~itg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tk~~~~v~-~-~~ 164 (570)
T 2vbf_A 96 GVGELSAINGLAG-SYAEN------LPV--VEIVGSPTSKVQNDGKFVHHTLADGDFKHFMKMHEPVTAARTLLT-A-EN 164 (570)
T ss_dssp THHHHHHHHHHHH-HHHTT------CCE--EEEEEECCHHHHHHTCCCTTSCSSSCCCHHHHHTGGGCSEEEECC-T-TT
T ss_pred CCCHHHHHHHHHH-HhhhC------CCE--EEEeCCCCHHHhhccccceeeccccchHHHHHHhhhhEEEEEEEC-c-cc
Confidence 6655555555552 33222 344 223332111 11122 2442 124678888876544444 3 55
Q ss_pred HHHHHHH----hHhCCCCEEEecccccc
Q 018167 190 AKGLLLS----CIRDPNPVVFFEPKWLY 213 (360)
Q Consensus 190 ~~~~l~~----a~~~~~P~~i~~~k~l~ 213 (360)
+...++. |...++||+|-.|....
T Consensus 165 ~~~~l~~A~~~A~~~~GPV~l~iP~d~~ 192 (570)
T 2vbf_A 165 ATYEIDRVLSQLLKERKPVYINLPVDVA 192 (570)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEEHHHH
T ss_pred HHHHHHHHHHHHhhCCCCEEEEcchhhh
Confidence 5554444 44457999998877653
No 51
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=70.72 E-value=9.9 Score=37.92 Aligned_cols=111 Identities=14% Similarity=0.186 Sum_probs=61.5
Q ss_pred CCcEEech-h-HHHHHHHHHHHHhcCC-CeeEEEecCcc--cHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCC
Q 018167 85 KSRVFNTP-L-CEQGIVGFAIGLAAMG-NRAIAEIQFAD--YIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVG 159 (360)
Q Consensus 85 p~r~i~~G-I-aE~~~vg~AaGlA~~G-~~p~~~~~f~~--F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g 159 (360)
|.+|+..+ - +=-..++.|.|+++.. -++++.+ ..+ |.+ .+..+- .++..+ +|+ .+|+...+++.-
T Consensus 396 ~~~~~~~~~~g~mG~~l~~AiGaala~~~~~vv~i-~GDGs~~~-~~~~L~-ta~~~~------l~~-~ivv~nN~~~g~ 465 (549)
T 3eya_A 396 KRRLLGSFNHGSMANAMPQALGAQATEPERQVVAM-CGDGGFSM-LMGDFL-SVVQMK------LPV-KIVVFNNSVLGF 465 (549)
T ss_dssp SCEEECCTTTCCTTCHHHHHHHHHHHSTTSCEEEE-EEHHHHHH-TGGGHH-HHHHTT------CCC-EEEEEECSBCCC
T ss_pred CCcEEeCCCCchhhhHHHHHHHHHHhCCCCcEEEE-Eccchhhc-cHHHHH-HHHHhC------CCe-EEEEEeCCccHH
Confidence 56777531 0 1114577888888764 4566664 444 322 233333 244444 466 566555543311
Q ss_pred ---C----C----CC-CCCchHHHHHcCCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 018167 160 ---H----G----GH-YHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (360)
Q Consensus 160 ---~----~----g~-~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~a~~~~~P~~i 206 (360)
. + +. .+..+-..+.++. |+..+...++.|+..+++.+++.++|++|
T Consensus 466 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~li 523 (549)
T 3eya_A 466 VAMEMKAGGYLTDGTELHDTNFARIAEAC-GITGIRVEKASEVDEALQRAFSIDGPVLV 523 (549)
T ss_dssp C------------CCBCCCCCHHHHHHHT-TSEEEEECSGGGHHHHHHHHHHSSSCEEE
T ss_pred HHHHHHhcCCCCcCCcCCCCCHHHHHHHc-CCcEEEeCCHHHHHHHHHHHHhCCCCEEE
Confidence 0 0 00 1111112333333 56677789999999999999999999998
No 52
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=69.68 E-value=6.1 Score=40.03 Aligned_cols=112 Identities=11% Similarity=-0.028 Sum_probs=62.4
Q ss_pred CCcEEechh--HHHHHHHHHHHHhcCC-CeeEEEecCcccH-HHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCC-
Q 018167 85 KSRVFNTPL--CEQGIVGFAIGLAAMG-NRAIAEIQFADYI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVG- 159 (360)
Q Consensus 85 p~r~i~~GI--aE~~~vg~AaGlA~~G-~~p~~~~~f~~F~-~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g- 159 (360)
|.+|+..+. +=-..+++|.|+++.. -++++++ ..+-. +..+..+- .++..+ +|+ .+|+....++.-
T Consensus 410 ~~~~~~~~~~g~~G~~l~~A~Gaala~~~~~vv~~-~GDG~~~~~~~~l~-~a~~~~------lp~-~~vv~nN~~~~~~ 480 (603)
T 4feg_A 410 SNRHITSNLFATMGVGIPGAIAAKLNYPERQVFNL-AGDGGASMTMQDLA-TQVQYH------LPV-INVVFTNCQYGFI 480 (603)
T ss_dssp TCEEECCCSSCCTTCHHHHHHHHHHHCTTSCEEEE-EEHHHHHHHGGGHH-HHHHTT------CCC-EEEEEECSBCHHH
T ss_pred CCceecCcccccccchhHHHhhHHHhCCCCcEEEE-eccHHHhhhHHHHH-HHHHHC------cCe-EEEEEECCchHHH
Confidence 567776432 1123667788888764 4556664 55521 22344443 344444 466 556555543321
Q ss_pred -----------CCCCCCCchHHH-HHcCCCCcEEEeeCCHHHHHHHHHHhH--hCCCCEEE
Q 018167 160 -----------HGGHYHSQSPEA-FFCHVPGLKVVIPRSPRQAKGLLLSCI--RDPNPVVF 206 (360)
Q Consensus 160 -----------~~g~~Hs~~d~a-~~r~iPn~~V~~P~d~~e~~~~l~~a~--~~~~P~~i 206 (360)
..++.....|++ +.++. |+..+.+.++.|+..+++.+. +.++|++|
T Consensus 481 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~~~gP~lI 540 (603)
T 4feg_A 481 KDEQEDTNQNDFIGVEFNDIDFSKIADGV-HMQAFRVNKIEQLPDVFEQAKAIAQHEPVLI 540 (603)
T ss_dssp HHHHHHHCSSCCCSSBCCCCCHHHHHHHT-TCEEEEECBGGGHHHHHHHHHHHTTTSCEEE
T ss_pred HHHHHHhcCCCcccCcCCCCCHHHHHHHC-CCeEEEECCHHHHHHHHHHHHHhcCCCcEEE
Confidence 111111122332 22222 556667789999999999999 78999998
No 53
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=68.01 E-value=11 Score=37.54 Aligned_cols=157 Identities=12% Similarity=-0.012 Sum_probs=80.6
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhcCCCeeEEEecCc
Q 018167 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFA 119 (360)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~~G~~p~~~~~f~ 119 (360)
++..+++.+.|.+ .+=+.++..+... .....+.+.+ .+.=|++.+ ..|++++.+|.|+|+....+++..++.
T Consensus 5 ~~~a~~l~~~L~~---~GV~~vfg~PG~~---~~~l~~al~~-~~~i~~i~~-~~E~~A~~~A~Gyar~tg~~v~~~tsG 76 (552)
T 1ovm_A 5 YCVADYLLDRLTD---CGADHLFGVPGDY---NLQFLDHVID-SPDICWVGC-ANELNASYAADGYARCKGFAALLTTFG 76 (552)
T ss_dssp CBHHHHHHHHHHH---TTCCEEEECCCGG---GHHHHHHHHH-CSSCEEEEC-SSHHHHHHHHHHHHHHHSCEEEEEETT
T ss_pred cCHHHHHHHHHHH---cCCCEEEECCChh---HHHHHHHHhc-CCCceEEee-CcHHHHHHHHHHHHHhhCCcEEEEccC
Confidence 4566666666654 3344444433311 1111233332 211356554 699999999999999733555444566
Q ss_pred ccHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCC--CCCC-CCCCC------chHHHHHcCCCCcEEEeeC--CHH
Q 018167 120 DYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA--VGHG-GHYHS------QSPEAFFCHVPGLKVVIPR--SPR 188 (360)
Q Consensus 120 ~F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~--~g~~-g~~Hs------~~d~a~~r~iPn~~V~~P~--d~~ 188 (360)
+=..-++.-|.+ +...+ .|+ +++++.... .+.+ ..||. |+...+++.+--.....+. -+.
T Consensus 77 pG~~N~~~gv~~-A~~~~------~Pl--l~itg~~p~~~~~~~~~~~~~~g~~~~q~~~~~~~~~tk~~~~v~~~~~~~ 147 (552)
T 1ovm_A 77 VGELSAMNGIAG-SYAEH------VPV--LHIVGAPGTAAQQRGELLHHTLGDGEFRHFYHMSEPITVAQAVLTEQNACY 147 (552)
T ss_dssp HHHHHTHHHHHH-HHHTT------CCE--EEEEEECCHHHHHHTCCCTTSCSSSCCSHHHHHTGGGCSEEEECCTTTHHH
T ss_pred CcHHHHHHHHHH-Hhhhc------CCE--EEEECCCCHHHHhcccccccccCCCcHHHHHHHHHhheeEEEEEccccHHH
Confidence 544444444542 32222 344 223332111 1111 12221 2346778877665544443 134
Q ss_pred HHHHHHHHhHhCCCCEEEecccccc
Q 018167 189 QAKGLLLSCIRDPNPVVFFEPKWLY 213 (360)
Q Consensus 189 e~~~~l~~a~~~~~P~~i~~~k~l~ 213 (360)
.+..+++.|...++||+|-.|..+.
T Consensus 148 ~i~~A~~~a~~~~GPV~l~iP~d~~ 172 (552)
T 1ovm_A 148 EIDRVLTTMLRERRPGYLMLPADVA 172 (552)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEeehhhc
Confidence 4455555555447999998887653
No 54
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=67.87 E-value=10 Score=31.22 Aligned_cols=49 Identities=18% Similarity=0.305 Sum_probs=32.0
Q ss_pred echhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEE
Q 018167 246 WGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLIS 296 (360)
Q Consensus 246 ~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvv 296 (360)
||++-..|...++.|++.|++++++|+... .|.+.+.+.+.++..||+.
T Consensus 15 ~GnT~~iA~~ia~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~d~ii~G 63 (159)
T 3fni_A 15 YGYSDRLAQAIINGITKTGVGVDVVDLGAA--VDLQELRELVGRCTGLVIG 63 (159)
T ss_dssp STTHHHHHHHHHHHHHHTTCEEEEEESSSC--CCHHHHHHHHHTEEEEEEE
T ss_pred ChHHHHHHHHHHHHHHHCCCeEEEEECcCc--CCHHHHHHHHHhCCEEEEE
Confidence 344555666667777778999999887653 1445555556667766655
No 55
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=66.83 E-value=27 Score=30.56 Aligned_cols=61 Identities=11% Similarity=0.003 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHH
Q 018167 251 SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASIL 314 (360)
Q Consensus 251 ~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~ 314 (360)
..+.++++.|++.|.+++++|+.. ++|.+..++.++.++.||+.--- ..+++-+.+..++-
T Consensus 47 ~L~~~~~~~l~~~g~ev~~~dL~~--~~Dv~~~~~~l~~aD~iv~~~P~-y~~~~p~~lK~~iD 107 (218)
T 3rpe_A 47 TLTNVAADFLRESGHQVKITTVDQ--GYDIESEIENYLWADTIIYQMPA-WWMGEPWILKKYID 107 (218)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEGGG--CCCHHHHHHHHHHCSEEEEEEEC-BTTBCCHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEEECCC--ccCHHHHHHHHHhCCEEEEECCh-HhccCCHHHHHHHH
Confidence 334456667788899999999985 78988888889999988777443 35777666666553
No 56
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=66.68 E-value=4.5 Score=34.16 Aligned_cols=31 Identities=23% Similarity=0.252 Sum_probs=24.9
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEe
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~ 272 (360)
.||+||+.|.. -+.+|..|.+.|++|.|++-
T Consensus 3 ~dV~IIGaGpa---GL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 3 VPIAIIGTGIA---GLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CCEEEECCSHH---HHHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECcCHH---HHHHHHHHHHCCCCEEEEEC
Confidence 48999999984 34466778889999999984
No 57
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=65.19 E-value=16 Score=36.53 Aligned_cols=110 Identities=10% Similarity=0.003 Sum_probs=63.2
Q ss_pred CCcEEec---hhHHHHHHHHHHHHhcCC---CeeEEEecCcc--cHHHHHHHHHHHHHhcccccCCCccccceEEEcCCC
Q 018167 85 KSRVFNT---PLCEQGIVGFAIGLAAMG---NRAIAEIQFAD--YIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYG 156 (360)
Q Consensus 85 p~r~i~~---GIaE~~~vg~AaGlA~~G---~~p~~~~~f~~--F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g 156 (360)
|.+|+.. |.- -..++.|.|+|+.. -++++++ ..+ |.+ .+..+-+ ++..+ +|+ .+|+...++
T Consensus 409 ~~~~~~~~g~g~~-G~~l~~AiGaa~a~~~~~~~vv~i-~GDG~~~~-~~~~L~t-a~~~~------l~~-~ivv~nN~~ 477 (563)
T 2uz1_A 409 PGGFLCHGYLGSM-GVGFGTALGAQVADLEAGRRTILV-TGDGSVGY-SIGEFDT-LVRKQ------LPL-IVIIMNNQS 477 (563)
T ss_dssp CSEEECCCTTCCT-TTHHHHHHHHHHHHHHHTCEEEEE-EEHHHHGG-GTTHHHH-HHHHT------CCC-EEEEEECSB
T ss_pred CCeEECCCCCccc-cChHHHHHHHHHHhhCCCCeEEEE-EccHHHhC-CHHHHHH-HHHhC------CCe-EEEEEeCCc
Confidence 6788872 222 25567778877653 4566664 444 322 2333432 44434 366 566555544
Q ss_pred CC--C------CCC-----CC-CCchHHHHHcCCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 018167 157 AV--G------HGG-----HY-HSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (360)
Q Consensus 157 ~~--g------~~g-----~~-Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~a~~~~~P~~i 206 (360)
+. + .+. +. |...-..+.++. |+..+...++.|+..+++.+++.++|++|
T Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~li 540 (563)
T 2uz1_A 478 WGATLHFQQLAVGPNRVTGTRLENGSYHGVAAAF-GADGYHVDSVESFSAALAQALAHNRPACI 540 (563)
T ss_dssp CHHHHHHHHHHTCTTCCCSCBCCCCCHHHHHHHT-TCEEEEECSHHHHHHHHHHHHHSSSCEEE
T ss_pred chHHHHHHHHhcCCCcccCCcCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHHCCCCEEE
Confidence 31 0 011 11 222222334444 67777889999999999999999999988
No 58
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=65.19 E-value=15 Score=30.98 Aligned_cols=67 Identities=10% Similarity=0.092 Sum_probs=43.9
Q ss_pred chhHHHHHHHHHH-HHhcCCCeeEEEeccccC----------CcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHH
Q 018167 247 GAQLSIMEQACLD-AEKEGISCELIDLKTLIP----------WDKETVEASVRKTGRLLISHEAPVTGGFGAEISASIL 314 (360)
Q Consensus 247 G~~~~~al~Aa~~-L~~~Gi~v~Vi~~~~ikP----------~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~ 314 (360)
|.+...|..+++. |++.|.+++++|+..+.. =+.+.+.+.+..++.+|++--- ..|++-..+..++.
T Consensus 16 g~t~~la~~i~~~~l~~~g~~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~i~~aD~ii~~sP~-y~~~~p~~lK~~ld 93 (197)
T 2vzf_A 16 STTAKLAEYALAHVLARSDSQGRHIHVIDLDPKALLRGDLSNAKLKEAVDATCNADGLIVATPI-YKASYTGLLKAFLD 93 (197)
T ss_dssp CHHHHHHHHHHHHHHHHSSEEEEEEEGGGSCHHHHHHTCTTSHHHHHHHHHHHHCSEEEEEEEC-BTTBCCHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHCCCeEEEEEccccCchhhcccccCcHHHHHHHHHHHHCCEEEEEeCc-cCCCCCHHHHHHHH
Confidence 4455666667778 888899999999877531 1334455667777777666433 34677666666553
No 59
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=64.80 E-value=13 Score=37.21 Aligned_cols=110 Identities=13% Similarity=0.218 Sum_probs=62.7
Q ss_pred CCcEEechhH--HHHHHHHHHHHhcCCCeeEEEecCcc--cHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCC-CC
Q 018167 85 KSRVFNTPLC--EQGIVGFAIGLAAMGNRAIAEIQFAD--YIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA-VG 159 (360)
Q Consensus 85 p~r~i~~GIa--E~~~vg~AaGlA~~G~~p~~~~~f~~--F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~-~g 159 (360)
|.++++.|.. =-..++.|.|+|+..-++++.+ ..+ |.+ .+..+- .+...+ +|+ .+|+...++. .+
T Consensus 416 p~~~~~~g~~g~~G~~l~~AiGaala~~~~vv~i-~GDGsf~~-~~~el~-ta~~~~------l~~-~ivv~NN~~~~~~ 485 (568)
T 2c31_A 416 PRKRLDSGTWGVMGIGMGYCVAAAAVTGKPVIAV-EGDSAFGF-SGMELE-TICRYN------LPV-TVIIMNNGGIYKG 485 (568)
T ss_dssp TTCEEESTTTTCSSCHHHHHHHHHHHHCSCEEEE-EEHHHHHT-TGGGHH-HHHHTT------CCE-EEEEEESSBSSCS
T ss_pred CCeEEcCCCCccccccHHHHHHHHhCCCCcEEEE-EcchHhhc-cHHHHH-HHHHhC------CCe-EEEEEeCchhHHH
Confidence 6778775431 1234677777777644555654 444 322 222232 234333 466 5666665552 11
Q ss_pred CC-----CC-----CCCchHHH-HHcCCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 018167 160 HG-----GH-----YHSQSPEA-FFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (360)
Q Consensus 160 ~~-----g~-----~Hs~~d~a-~~r~iPn~~V~~P~d~~e~~~~l~~a~~~~~P~~i 206 (360)
.. +. .+. .|+. +.++. |+..+...++.|+..+++.+++.++|++|
T Consensus 486 ~~~~~~~~~~~~~~~~~-~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~p~li 541 (568)
T 2c31_A 486 NEADPQPGVISCTRLTR-GRYDMMMEAF-GGKGYVANTPAELKAALEEAVASGKPCLI 541 (568)
T ss_dssp CCCCSBTTBCCTTBCCC-CCHHHHHHTT-TCEEEEESSHHHHHHHHHHHHHHTSCEEE
T ss_pred HHHHhhcCCcccCcCCC-CCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEE
Confidence 11 00 111 2332 33333 67778889999999999999988999988
No 60
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=62.98 E-value=11 Score=29.72 Aligned_cols=31 Identities=13% Similarity=0.123 Sum_probs=24.1
Q ss_pred echhHHHHHHHHHHHHhcCCCeeEEEecccc
Q 018167 246 WGAQLSIMEQACLDAEKEGISCELIDLKTLI 276 (360)
Q Consensus 246 ~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ik 276 (360)
+|++-..|...++.|++.|++++++|+....
T Consensus 9 tGnT~~iA~~ia~~l~~~g~~v~~~~~~~~~ 39 (138)
T 5nul_A 9 TGNTEKMAELIAKGIIESGKDVNTINVSDVN 39 (138)
T ss_dssp SSHHHHHHHHHHHHHHHTTCCCEEEEGGGCC
T ss_pred CchHHHHHHHHHHHHHHCCCeEEEEEhhhCC
Confidence 4666677777777888889999999987654
No 61
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=62.89 E-value=13 Score=26.84 Aligned_cols=59 Identities=15% Similarity=0.154 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEeccccC-CcHH---HHHHHHhc------CCeEEEEeCCCcCCchHHH
Q 018167 250 LSIMEQACLDAEKEGISCELIDLKTLIP-WDKE---TVEASVRK------TGRLLISHEAPVTGGFGAE 308 (360)
Q Consensus 250 ~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP-~d~~---~l~~~~~~------~~~ivvvEe~~~~GGlgs~ 308 (360)
-..|.+|.+.|++.|++.+.+|+..... -|.+ .+.+.... +-..|+++++...||+...
T Consensus 14 Cp~C~~ak~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i~~g~~igG~d~l 82 (87)
T 1aba_A 14 CGPCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFAPDGSHIGGFDQL 82 (87)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEECTTSCEEESHHHH
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEEECCEEEeCHHHH
Confidence 4578888899999999999999975421 2333 33333322 2345666455678887653
No 62
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=62.75 E-value=56 Score=25.93 Aligned_cols=109 Identities=14% Similarity=0.119 Sum_probs=65.2
Q ss_pred cEEEEEech-hHHHHHHHHHHHHhcCCCeeEEEeccccCCcH--HHHHHHHhcC---CeEEEE-eCCCcCCchHHHHHHH
Q 018167 240 DITLVGWGA-QLSIMEQACLDAEKEGISCELIDLKTLIPWDK--ETVEASVRKT---GRLLIS-HEAPVTGGFGAEISAS 312 (360)
Q Consensus 240 dv~Iia~G~-~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~--~~l~~~~~~~---~~ivvv-Ee~~~~GGlgs~v~~~ 312 (360)
.++|++.|. ......++++.+-.+ -.+..||++-=...+. +.+.+.+++. +.|+++ +- |.... ++..
T Consensus 6 giiivsHG~~~A~~l~~~a~~i~G~-~~~~aid~~~~~~~~~~~~~i~~~i~~~d~~~GVLiL~Dm----GSp~n-~a~~ 79 (130)
T 3gx1_A 6 EVIVMMHGRSTATSMVETVQELLSI-ESGIALDMPLTVEVKAMYEKLKQTVVKLNPVKGVLILSDM----GSLTS-FGNI 79 (130)
T ss_dssp EEEEEEESSSHHHHHHHHHHHHHTC-CCCEEEEECTTSCHHHHHHHHHHHHHTSCCTTCEEEEECS----GGGGT-HHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHcCc-cCEEEEEecCCCCHHHHHHHHHHHHHhhCCCCCEEEEEeC----CCHHH-HHHH
Confidence 588999999 888888999987654 5777888765433322 3455556542 445544 54 33332 3444
Q ss_pred HHHhccccCCCceEEEecCCCCcc-cc--ccccCCCCHHHHHHHHHHhhh
Q 018167 313 ILERCFLRLEAPVARVCGLDTPFP-LV--FEPFYMPTKNKILDAIKSTVN 359 (360)
Q Consensus 313 l~~~~~~~l~~~~~~i~~~~~~~~-~~--~e~~gl~~~~~I~~~i~~~l~ 359 (360)
+.+.. ..++.-+.+.+.|.- +. ...++- +-+.|++.++++.+
T Consensus 80 l~~~~----~~~v~vI~gvnlpmllea~~~~~~~~-~l~el~~~~~~~~~ 124 (130)
T 3gx1_A 80 LTEEL----GIRTKTVTMVSTPVVLEAMRKASLGR-GLEDIYQSCEQLFE 124 (130)
T ss_dssp HHHHH----CCCEEEECSCCHHHHHHHHHHHHTTC-CHHHHHHHHHHHHH
T ss_pred HHHhc----CCCEEEEeCCCHHHHHHHHHHhhcCC-CHHHHHHHHHHHHH
Confidence 44321 346777766665421 11 123455 78889988887654
No 63
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=62.70 E-value=12 Score=37.60 Aligned_cols=111 Identities=15% Similarity=0.113 Sum_probs=64.0
Q ss_pred CCcEEechh--HHHHHHHHHHHHhcCC-CeeEEEecCcc--cHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCC
Q 018167 85 KSRVFNTPL--CEQGIVGFAIGLAAMG-NRAIAEIQFAD--YIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVG 159 (360)
Q Consensus 85 p~r~i~~GI--aE~~~vg~AaGlA~~G-~~p~~~~~f~~--F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g 159 (360)
|.+|+..+- +=-..++.|.|+|+.. -++++++ ..+ |.+ .+..+. .+...+ +|+ .+|+...+++.-
T Consensus 410 ~~~~~~~~g~g~mG~~l~~AiGaala~~~~~vv~i-~GDG~~~~-~~~~L~-ta~~~~------l~~-~ivv~nN~~~~~ 479 (566)
T 1ozh_A 410 ARQVMISNGQQTMGVALPWAIGAWLVNPERKVVSV-SGDGGFLQ-SSMELE-TAVRLK------ANV-LHLIWVDNGYNM 479 (566)
T ss_dssp CSEEECCCTTCCTTCHHHHHHHHHHHSTTSEEEEE-EEHHHHHH-HTTHHH-HHHHHT------CCE-EEEEEECSBCHH
T ss_pred CCeEEeCCCcccccchHHHHHHHHHhCCCCCEEEE-EcChHHhc-cHHHHH-HHHHhC------CCc-EEEEEECCchhH
Confidence 678876320 1113567788887753 3566664 454 333 344443 244444 466 566665544310
Q ss_pred -----------CCCCCCCchHH-HHHcCCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 018167 160 -----------HGGHYHSQSPE-AFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (360)
Q Consensus 160 -----------~~g~~Hs~~d~-a~~r~iPn~~V~~P~d~~e~~~~l~~a~~~~~P~~i 206 (360)
..++.....|+ .+.++. |+..+...+++|+..+++.+++.++|++|
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~li 537 (566)
T 1ozh_A 480 VAIQEEKKYQRLSGVEFGPMDFKAYAESF-GAKGFAVESAEALEPTLRAAMDVDGPAVV 537 (566)
T ss_dssp HHHHHHHHHSSCCSCBCCCCCHHHHHHTT-TSEEEECCSGGGHHHHHHHHHHSSSCEEE
T ss_pred HHHHHHHhcCCCccCcCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEE
Confidence 01111111233 344444 67777888999999999999998999988
No 64
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=62.65 E-value=20 Score=34.49 Aligned_cols=73 Identities=10% Similarity=0.105 Sum_probs=52.0
Q ss_pred EEEEechh----HHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHH
Q 018167 242 TLVGWGAQ----LSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILE 315 (360)
Q Consensus 242 ~Iia~G~~----~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~ 315 (360)
++|.|++| -..|...++.|.++|+++.++++..+..-|...+.+.+.+++.+++-- ....|++-..+...+.+
T Consensus 268 v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~~~~~d~~~~~~s~i~~~i~~~~~ivlGs-pT~~~~~~p~~~~~l~~ 344 (410)
T 4dik_A 268 VTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSDEERPAISEILKDIPDSEALIFGV-STYEAEIHPLMRFTLLE 344 (410)
T ss_dssp EEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEEEECSSCCCCHHHHHHHSTTCSEEEEEE-CCTTSSSCHHHHHHHHH
T ss_pred eeeEEecccChHHHHHHHHHHHHHhcCCceEEEEeccCCCCCHHHHHHHHHhCCeEEEEe-CCcCCcCCHHHHHHHHH
Confidence 34455555 455677777888899999999999888888887878788888776654 34567776665555443
No 65
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=62.62 E-value=15 Score=30.06 Aligned_cols=49 Identities=16% Similarity=0.354 Sum_probs=32.8
Q ss_pred echhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEe
Q 018167 246 WGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISH 297 (360)
Q Consensus 246 ~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvE 297 (360)
||++-..|...++.|++.|++++++|+... |.+.+.+.+.+++.||+.-
T Consensus 11 tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~---~~~~~~~~~~~~d~ii~Gs 59 (161)
T 3hly_A 11 YGYSDRLSQAIGRGLVKTGVAVEMVDLRAV---DPQELIEAVSSARGIVLGT 59 (161)
T ss_dssp STTHHHHHHHHHHHHHHTTCCEEEEETTTC---CHHHHHHHHHHCSEEEEEC
T ss_pred ChHHHHHHHHHHHHHHhCCCeEEEEECCCC---CHHHHHHHHHhCCEEEEEc
Confidence 344555666667777778999999987653 4455555566777776653
No 66
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=61.48 E-value=21 Score=31.19 Aligned_cols=68 Identities=7% Similarity=-0.006 Sum_probs=46.9
Q ss_pred chhHHHHHHHHHHHHhc-CCCeeEEEeccccC---------------------CcHHHHHHHHhcCCeEEEEeCCCcCCc
Q 018167 247 GAQLSIMEQACLDAEKE-GISCELIDLKTLIP---------------------WDKETVEASVRKTGRLLISHEAPVTGG 304 (360)
Q Consensus 247 G~~~~~al~Aa~~L~~~-Gi~v~Vi~~~~ikP---------------------~d~~~l~~~~~~~~~ivvvEe~~~~GG 304 (360)
|.+...+..+++.|++. |.+++++|+..+.+ -|.+.+.+.+..++.||+.-- ...++
T Consensus 15 s~T~~la~~i~~~l~~~~g~~v~~~dl~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~l~~AD~iI~~sP-~y~~~ 93 (242)
T 1sqs_A 15 SKTLEYTKRLSSIISSRNNVDISFRTPFNSELEISNSDSEELFKKGIDRQSNADDGGVIKKELLESDIIIISSP-VYLQN 93 (242)
T ss_dssp CHHHHHHHHHHHHHHHHSCCEEEEECTTTCCCCCCCCCHHHHHHHCCCSSTTTSTHHHHHHHHHHCSEEEEEEE-ECSSS
T ss_pred ChHHHHHHHHHHHHHHhcCCeEEEEEcccCCCCCCCchHHhhccCCCCccchHHHHHHHHHHHHHCCEEEEEcc-ccccC
Confidence 44555666677788877 99999999886531 244566677788887776643 34577
Q ss_pred hHHHHHHHHHH
Q 018167 305 FGAEISASILE 315 (360)
Q Consensus 305 lgs~v~~~l~~ 315 (360)
+.+.+..++..
T Consensus 94 ~p~~lK~~iDr 104 (242)
T 1sqs_A 94 VSVDTKNFIER 104 (242)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 77777776654
No 67
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=60.89 E-value=10 Score=28.96 Aligned_cols=70 Identities=10% Similarity=0.042 Sum_probs=45.1
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHh-cCCeEEEEeCCCcCCchHHHH
Q 018167 238 GSDITLVGWG----AQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR-KTGRLLISHEAPVTGGFGAEI 309 (360)
Q Consensus 238 G~dv~Iia~G----~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~-~~~~ivvvEe~~~~GGlgs~v 309 (360)
..+|+|.+.+ +.-..|.+|.+.|++.|++.+.+|+..- |--.+.+.+... .+-..|++.. ...||+....
T Consensus 17 ~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~~~~dI~~~-~~~~~~l~~~~g~~tvP~ifi~g-~~iGG~d~l~ 91 (109)
T 3ipz_A 17 SEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNILEN-EMLRQGLKEYSNWPTFPQLYIGG-EFFGGCDITL 91 (109)
T ss_dssp SSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGGC-HHHHHHHHHHHTCSSSCEEEETT-EEEECHHHHH
T ss_pred cCCEEEEEecCCCCCCChhHHHHHHHHHHcCCCcEEEECCCC-HHHHHHHHHHHCCCCCCeEEECC-EEEeCHHHHH
Confidence 4678888887 3567899999999999999999998641 111122332222 2334566654 4578876543
No 68
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=60.24 E-value=20 Score=31.99 Aligned_cols=75 Identities=15% Similarity=-0.006 Sum_probs=49.2
Q ss_pred CcEEEEEec-----hhHHHHHHHHHHHHhcCCCeeEEEeccccCCc--------HHHHHHHHhcCCeEEEEeCCCcCCch
Q 018167 239 SDITLVGWG-----AQLSIMEQACLDAEKEGISCELIDLKTLIPWD--------KETVEASVRKTGRLLISHEAPVTGGF 305 (360)
Q Consensus 239 ~dv~Iia~G-----~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d--------~~~l~~~~~~~~~ivvvEe~~~~GGl 305 (360)
.+|++|... .....+..+++.+++.|++++++|+..+..++ .+.+.+.+.....+|++--- ..+++
T Consensus 35 mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL~~~pl~~~d~~~~d~~~~l~~~i~~AD~iI~~sP~-Yn~si 113 (247)
T 2q62_A 35 PRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDPSGLPLPDAAPVSHPKVQELRELSIWSEGQVWVSPE-RHGAM 113 (247)
T ss_dssp CEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCCTTCCCTTSSCTTSHHHHHHHHHHHHCSEEEEEEEC-SSSSC
T ss_pred CeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEhhcCCCCcCCCCCCHHHHHHHHHHHHCCEEEEEeCC-CCCCc
Confidence 356555532 23345555677787789999999998853221 45567778888887776443 45777
Q ss_pred HHHHHHHHH
Q 018167 306 GAEISASIL 314 (360)
Q Consensus 306 gs~v~~~l~ 314 (360)
...+..++-
T Consensus 114 pa~LKn~iD 122 (247)
T 2q62_A 114 TGIMKAQID 122 (247)
T ss_dssp CHHHHHHHH
T ss_pred cHHHHHHHH
Confidence 777776664
No 69
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=59.78 E-value=13 Score=37.11 Aligned_cols=29 Identities=21% Similarity=0.279 Sum_probs=26.3
Q ss_pred CcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 018167 178 GLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (360)
Q Consensus 178 n~~V~~P~d~~e~~~~l~~a~~~~~P~~i 206 (360)
|+.-+...++.|+..+++.+++.++|++|
T Consensus 505 G~~~~~v~~~~~l~~al~~a~~~~gp~li 533 (556)
T 3hww_A 505 ELKYHRPQNWQELETAFADAWRTPTTTVI 533 (556)
T ss_dssp TCEEECCSSHHHHHHHHHHHTTSSSEEEE
T ss_pred CCcEEecCCHHHHHHHHHHHHhCCCCEEE
Confidence 67778889999999999999998999998
No 70
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=58.51 E-value=14 Score=28.63 Aligned_cols=49 Identities=18% Similarity=0.259 Sum_probs=37.7
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCC
Q 018167 241 ITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTG 291 (360)
Q Consensus 241 v~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~ 291 (360)
++|.+. +.-..|.+|.+.|++.|++.+++|+.. .|++.+.+.+.+++.+
T Consensus 2 i~iY~~-~~C~~C~kak~~L~~~gi~~~~~di~~-~~~~~~~l~~~~~~~g 50 (114)
T 1rw1_A 2 YVLYGI-KACDTMKKARTWLDEHKVAYDFHDYKA-VGIDREHLRRWCAEHG 50 (114)
T ss_dssp EEEEEC-SSCHHHHHHHHHHHHTTCCEEEEEHHH-HCCCHHHHHHHHHHHC
T ss_pred EEEEEC-CCChHHHHHHHHHHHCCCceEEEeecC-CCCCHHHHHHHHHhCC
Confidence 444443 334778899999999999999999976 7888888887776554
No 71
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=57.00 E-value=22 Score=29.64 Aligned_cols=68 Identities=12% Similarity=0.177 Sum_probs=41.8
Q ss_pred echhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHH-------------HHHHHHhcCCeEEEEeCCCcCCchHHHHHHH
Q 018167 246 WGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKE-------------TVEASVRKTGRLLISHEAPVTGGFGAEISAS 312 (360)
Q Consensus 246 ~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~-------------~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~ 312 (360)
+|++-..|..+++.|++.|++++++|+... +.+.- ...+.+..++.||+.-- ...|++-..+..+
T Consensus 16 ~g~T~~la~~i~~~l~~~g~~v~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP-~y~~~~~~~lk~~ 93 (200)
T 2a5l_A 16 HGATAEMARQIARGVEQGGFEARVRTVPAV-STECEAVAPDIPAEGALYATLEDLKNCAGLALGSP-TRFGNMASPLKYF 93 (200)
T ss_dssp SSHHHHHHHHHHHHHHHTTCEEEEEBCCCE-EC-------------CCBCCHHHHHTCSEEEEEEE-CBTTBCCHHHHHH
T ss_pred CChHHHHHHHHHHHHhhCCCEEEEEEhhhc-cchhhhhccccccccCchhhHHHHHHCCEEEEEcC-hhccCccHHHHHH
Confidence 455666677777888888999999999875 21110 11344556676665543 2346666666665
Q ss_pred HHH
Q 018167 313 ILE 315 (360)
Q Consensus 313 l~~ 315 (360)
+..
T Consensus 94 ld~ 96 (200)
T 2a5l_A 94 LDG 96 (200)
T ss_dssp HHT
T ss_pred HHH
Confidence 543
No 72
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=57.00 E-value=14 Score=29.76 Aligned_cols=47 Identities=9% Similarity=-0.007 Sum_probs=34.9
Q ss_pred CCceEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccc
Q 018167 229 LSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTL 275 (360)
Q Consensus 229 ~Gk~~vl~~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~i 275 (360)
+|+...+.+.+++++||-|+.+...+..++.|.+.|.++.++-.|+-
T Consensus 9 ~G~~~~~~~~~~~llIaGG~GiaPl~sm~~~l~~~~~~v~l~g~R~~ 55 (142)
T 3lyu_A 9 LGTPVPMEKFGKILAIGAYTGIVEVYPIAKAWQEIGNDVTTLHVTFE 55 (142)
T ss_dssp CSCCBCCCCCSEEEEEEETTHHHHHHHHHHHHHHTTCEEEEEEEEEG
T ss_pred CCCCccCCCCCeEEEEECcCcHHHHHHHHHHHHhcCCcEEEEEeCCH
Confidence 34433333457899999999999999999988888888888744543
No 73
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=55.75 E-value=21 Score=35.90 Aligned_cols=111 Identities=10% Similarity=0.016 Sum_probs=61.6
Q ss_pred CCcEEec---hhHHHHHHHHHHHHhcCC-CeeEEEecCcccH-HHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCC
Q 018167 85 KSRVFNT---PLCEQGIVGFAIGLAAMG-NRAIAEIQFADYI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVG 159 (360)
Q Consensus 85 p~r~i~~---GIaE~~~vg~AaGlA~~G-~~p~~~~~f~~F~-~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g 159 (360)
|.+|+.. |.- -..++.|.|+|+.. -++++++ ..+-. +..++.+. .++..+ +|+ .+|+...+++.-
T Consensus 403 ~~~~~~~~~~g~m-G~~l~~AiGaala~~~~~vv~i-~GDG~~~~~~~~L~-ta~~~~------l~~-~ivv~NN~~~~~ 472 (590)
T 1v5e_A 403 KNMWRTSPLFATM-GIAIPGGLGAKNTYPDRQVWNI-IGDGAFSMTYPDVV-TNVRYN------MPV-INVVFSNTEYAF 472 (590)
T ss_dssp TSEEECCCSSCCT-TCHHHHHHHHHHHCTTSCEEEE-EEHHHHHHHGGGHH-HHHHTT------CCC-EEEEEECSSCTT
T ss_pred CCeEEcCCCCCcc-cChHHHHHHHHHhCCCCeEEEE-EechHHhchHHHHH-HHHHhC------CCC-EEEEEECCchHH
Confidence 6777742 211 24567778877752 3555564 45421 22344443 344444 466 566655543321
Q ss_pred C----CC-------C-CCCchHHHHHcCCCCcEEEeeCCHHHHHHHHHHhHhC---CCCEEE
Q 018167 160 H----GG-------H-YHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRD---PNPVVF 206 (360)
Q Consensus 160 ~----~g-------~-~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~a~~~---~~P~~i 206 (360)
. .. + .+...-..+.++. |+..+...+++|+..+++.+++. ++|++|
T Consensus 473 ~~~~q~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~~~gp~li 533 (590)
T 1v5e_A 473 IKNKYEDTNKNLFGVDFTDVDYAKIAEAQ-GAKGFTVSRIEDMDRVMAEAVAANKAGHTVVI 533 (590)
T ss_dssp GGGTTSSSCCSCCCCCCCCCCHHHHHHHT-TSEEEEECBHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHhcCCCccccCCCCCHHHHHHHc-CCEEEEECCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 0 00 1 1112222333443 66677778999999999999887 899988
No 74
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=54.58 E-value=18 Score=28.41 Aligned_cols=42 Identities=17% Similarity=0.215 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCC
Q 018167 249 QLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTG 291 (360)
Q Consensus 249 ~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~ 291 (360)
.-..|.+|.+.|++.|++.+++|+.. .|.+.+.|.+.+++.+
T Consensus 12 ~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~eL~~~l~~~g 53 (120)
T 3fz4_A 12 KCSTCRRAKAELDDLAWDYDAIDIKK-NPPAASLIRNWLENSG 53 (120)
T ss_dssp SCHHHHHHHHHHHHHTCCEEEEETTT-SCCCHHHHHHHHHHSC
T ss_pred CChHHHHHHHHHHHcCCceEEEEecc-CchhHHHHHHHHHHcC
Confidence 35678899999999999999999987 7889999888887664
No 75
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=54.33 E-value=19 Score=28.00 Aligned_cols=50 Identities=24% Similarity=0.312 Sum_probs=38.8
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCC
Q 018167 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTG 291 (360)
Q Consensus 240 dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~ 291 (360)
.++|.+.- .-..|.+|.+.|++.|++.+++|+.. .|.+.+.+.+.+++.+
T Consensus 6 ~i~iY~~~-~C~~C~ka~~~L~~~gi~y~~~di~~-~~~~~~~l~~~~~~~g 55 (120)
T 2kok_A 6 SVTIYGIK-NCDTMKKARIWLEDHGIDYTFHDYKK-EGLDAETLDRFLKTVP 55 (120)
T ss_dssp CEEEEECS-SCHHHHHHHHHHHHHTCCEEEEEHHH-HCCCHHHHHHHHHHSC
T ss_pred EEEEEECC-CChHHHHHHHHHHHcCCcEEEEeeeC-CCCCHHHHHHHHHHcC
Confidence 35565543 34788899999999999999999975 5888888888777665
No 76
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=53.78 E-value=86 Score=25.27 Aligned_cols=108 Identities=14% Similarity=0.173 Sum_probs=62.1
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcH--HHHHHHHh----cCCeEEEEeCCCcCCchHHHHHHHH
Q 018167 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDK--ETVEASVR----KTGRLLISHEAPVTGGFGAEISASI 313 (360)
Q Consensus 240 dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~--~~l~~~~~----~~~~ivvvEe~~~~GGlgs~v~~~l 313 (360)
.++|++.|......+++++.+--+--.+..+++..=...+. +.+.+.++ ..+.++++-| ..||-=..++..+
T Consensus 5 giii~sHG~~A~gl~~~~~~i~G~~~~v~av~~~~~~~~~~~~~~i~~~i~~~~~~~~gvliLtD--l~GGSp~n~a~~l 82 (144)
T 3lfh_A 5 FVLIITHGDFGKGLLSGAEVIIGKQENVHTVGLNLGDNIEVVRKEVEKIIKEKLQEDKEIIIVVD--LFGGSPFNIALSM 82 (144)
T ss_dssp EEEEEEETTHHHHHHHHHHHHHCCCSSEEEEEECTTCCHHHHHHHHHHHHHHHHTTTCEEEEEES--SSSSHHHHHHHHH
T ss_pred eEEEEeCcHHHHHHHHHHHHHcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHhhCCCCcEEEEEe--CCCCCHHHHHHHH
Confidence 57899999988888888887753334677787754222221 23444443 3456776655 3466545555545
Q ss_pred HHhccccCCCceEEEecCCCCc--cccccccCCCCHHHHHHHHHH
Q 018167 314 LERCFLRLEAPVARVCGLDTPF--PLVFEPFYMPTKNKILDAIKS 356 (360)
Q Consensus 314 ~~~~~~~l~~~~~~i~~~~~~~--~~~~e~~gl~~~~~I~~~i~~ 356 (360)
.+. .++.-+.|.+-|- ......... +.+.+++.+.+
T Consensus 83 ~~~------~~v~vItGvNLpMlle~~~~r~~~-~l~el~~~~~~ 120 (144)
T 3lfh_A 83 MKE------YDVKVITGINMPMLVELLTSINVY-DTTELLENISK 120 (144)
T ss_dssp HHH------HCCEEEESCCHHHHHHHHHSTTTS-CHHHHHHHHHH
T ss_pred hcC------CCEEEEeCCCHHHHHHHHHhccCC-CHHHHHHHHHH
Confidence 432 2456677777542 111222345 67777666554
No 77
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=53.30 E-value=16 Score=29.40 Aligned_cols=67 Identities=18% Similarity=0.103 Sum_probs=42.6
Q ss_pred CcEEEEEec----hhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHh-cCCeEEEEeCCCcCCchHH
Q 018167 239 SDITLVGWG----AQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR-KTGRLLISHEAPVTGGFGA 307 (360)
Q Consensus 239 ~dv~Iia~G----~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~-~~~~ivvvEe~~~~GGlgs 307 (360)
.+|+|.++| ..-..|.+|.+.|++.|++.+.+|+.. .|--.+.|.+... .+-..|++.. ...||+..
T Consensus 35 ~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv~y~~vdI~~-d~~~~~~L~~~~G~~tvP~VfI~G-~~iGG~d~ 106 (135)
T 2wci_A 35 NPILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQ-NPDIRAELPKYANWPTFPQLWVDG-ELVGGCDI 106 (135)
T ss_dssp CSEEEEESBCSSSBSSHHHHHHHHHHHTTCSCCEEEEGGG-CHHHHHHHHHHHTCCSSCEEEETT-EEEESHHH
T ss_pred CCEEEEEEecCCCCCCccHHHHHHHHHHcCCceEEEECCC-CHHHHHHHHHHHCCCCcCEEEECC-EEEEChHH
Confidence 457777776 556788899999999999999999875 2211122322222 2334566654 45788854
No 78
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=52.90 E-value=1.2e+02 Score=27.24 Aligned_cols=77 Identities=12% Similarity=0.100 Sum_probs=43.0
Q ss_pred cccCCcHHHHHHHHhcCCeEEEEeCCC-----cCCchHHHHHHHHHHhccccCCCceEEEecCCCCccccccc-cC--CC
Q 018167 274 TLIPWDKETVEASVRKTGRLLISHEAP-----VTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLVFEP-FY--MP 345 (360)
Q Consensus 274 ~ikP~d~~~l~~~~~~~~~ivvvEe~~-----~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~~~~~~~e~-~g--l~ 345 (360)
.+-+++.+.+.+.++..+-+| +=... ...|++..+.|+++- ..|+.. ......++..+. .| .+
T Consensus 257 ~~g~~~~~~~~~~~~~ad~~v-~ps~~~~~~~~~e~~~~~~~Ea~a~------G~PvI~--~~~~~~~e~i~~~~g~~~~ 327 (394)
T 3okp_A 257 FLGRLEYQDMINTLAAADIFA-MPARTRGGGLDVEGLGIVYLEAQAC------GVPVIA--GTSGGAPETVTPATGLVVE 327 (394)
T ss_dssp EEESCCHHHHHHHHHHCSEEE-ECCCCBGGGTBCCSSCHHHHHHHHT------TCCEEE--CSSTTGGGGCCTTTEEECC
T ss_pred EcCCCCHHHHHHHHHhCCEEE-ecCccccccccccccCcHHHHHHHc------CCCEEE--eCCCChHHHHhcCCceEeC
Confidence 345567777778887776443 31111 115677888887753 345532 222223333222 22 22
Q ss_pred --CHHHHHHHHHHhhh
Q 018167 346 --TKNKILDAIKSTVN 359 (360)
Q Consensus 346 --~~~~I~~~i~~~l~ 359 (360)
|++++.+++.++++
T Consensus 328 ~~d~~~l~~~i~~l~~ 343 (394)
T 3okp_A 328 GSDVDKLSELLIELLD 343 (394)
T ss_dssp TTCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHh
Confidence 78999999988764
No 79
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=52.64 E-value=33 Score=35.49 Aligned_cols=75 Identities=9% Similarity=0.044 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCC-C-chHH-HHHcCCCCcEEEee---CCHHHHHHHHHHh
Q 018167 124 PAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-S-QSPE-AFFCHVPGLKVVIP---RSPRQAKGLLLSC 197 (360)
Q Consensus 124 ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~H-s-~~d~-a~~r~iPn~~V~~P---~d~~e~~~~l~~a 197 (360)
.+++.+. .++..++ +. .+++.+..+.. -++.++ . .+|+ ..+++. |+.++.+ .|..++..+++.+
T Consensus 188 ~~~Eal~-~A~~~~L------~~-livI~dnN~~~-i~~~~~~~~~~d~~~~~~a~-G~~~~~v~DG~d~~~l~~Al~~a 257 (690)
T 3m49_A 188 VSAEASS-LAAHLQL------GR-LVVLYDSNDIS-LDGDLNRSFSESVEDRYKAY-GWQVIRVEDGNDIEAIAKAIEEA 257 (690)
T ss_dssp HHHHHHH-HHHHTTC------TT-EEEEEEECSBC-SSSBGGGTCCCCHHHHHHHH-TCEEEEESCTTCHHHHHHHHHHH
T ss_pred cHHHHHH-HHHHhCC------Ce-EEEEEECCCee-cccchhhccchhHHHHHHHc-CCcEEEEecCCCHHHHHHHHHHH
Confidence 4566655 4665553 33 34445544432 233322 1 3343 445555 8899988 7899999999999
Q ss_pred Hh-CCCCEEEec
Q 018167 198 IR-DPNPVVFFE 208 (360)
Q Consensus 198 ~~-~~~P~~i~~ 208 (360)
.+ .++|++|..
T Consensus 258 ~~~~~~P~lI~v 269 (690)
T 3m49_A 258 KADEKRPTLIEV 269 (690)
T ss_dssp HHCCSSCEEEEE
T ss_pred HhcCCCCEEEEE
Confidence 88 689999953
No 80
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=52.23 E-value=40 Score=28.68 Aligned_cols=62 Identities=8% Similarity=-0.030 Sum_probs=46.2
Q ss_pred HHHHHHHHHhcCCCeeEEEeccccC---CcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHH
Q 018167 253 MEQACLDAEKEGISCELIDLKTLIP---WDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILE 315 (360)
Q Consensus 253 al~Aa~~L~~~Gi~v~Vi~~~~ikP---~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~ 315 (360)
+...++.+++.|.+++++|+....| .|.+.+.+.+..++.||+.-- ...+++-+.+..++-.
T Consensus 19 ~~~l~~~~~~~g~ev~~~dL~~~~~~~~~dv~~~~~~l~~AD~iv~~~P-~y~~~~pa~lK~~iDr 83 (192)
T 3f2v_A 19 HKHWSDAVRQHTDRFTVHELYAVYPQGKIDVAAEQKLIETHDSLVWQFP-IYWFNCPPLLKQWLDE 83 (192)
T ss_dssp HHHHHHHHTTCTTTEEEEEHHHHCTTCCCCHHHHHHHHHTSSSEEEEEE-CBTTBCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEEchhcCCCCchhHHHHHHHHHhCCEEEEEcC-hhhcCCCHHHHHHHHH
Confidence 4444566667799999999998765 567778888888888877644 3467888888777755
No 81
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=51.94 E-value=22 Score=27.56 Aligned_cols=60 Identities=10% Similarity=0.155 Sum_probs=35.1
Q ss_pred chhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeCCCcCCchHHH--HHHHHH
Q 018167 247 GAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAE--ISASIL 314 (360)
Q Consensus 247 G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~--v~~~l~ 314 (360)
|++-..|...++.|++.|++++++|+... |.+ .+.+++.+++.--- ..+|.-.. +..++.
T Consensus 11 GnT~~~a~~i~~~l~~~g~~v~~~~~~~~---~~~----~l~~~d~vi~g~p~-y~~~~~~~~~~~~fl~ 72 (137)
T 2fz5_A 11 GNTEAMANEIEAAVKAAGADVESVRFEDT---NVD----DVASKDVILLGCPA-MGSEELEDSVVEPFFT 72 (137)
T ss_dssp SHHHHHHHHHHHHHHHTTCCEEEEETTSC---CHH----HHHTCSEEEEECCC-BTTTBCCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHhCCCeEEEEEcccC---CHH----HHhcCCEEEEEccc-cCCCCCCHHHHHHHHH
Confidence 55556666667777778999999987654 322 24456666665332 23444333 444443
No 82
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=51.91 E-value=24 Score=34.76 Aligned_cols=112 Identities=14% Similarity=0.097 Sum_probs=61.3
Q ss_pred CCcEEech-hHHHHHHHHHHHHhcCC-CeeEEEecCcccH-HHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCC--
Q 018167 85 KSRVFNTP-LCEQGIVGFAIGLAAMG-NRAIAEIQFADYI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVG-- 159 (360)
Q Consensus 85 p~r~i~~G-IaE~~~vg~AaGlA~~G-~~p~~~~~f~~F~-~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g-- 159 (360)
|.+|+..+ -+=-..++.|.|+|+.- -++++++ ..+-. +..++.+-+ ++..+ +|+ .+|+...+++.-
T Consensus 392 ~~~~~~~~gg~~G~~l~~A~G~a~a~~~~~vv~~-~GDG~~~~~~~~l~~-a~~~~------l~~-~ivv~nN~~~~~~~ 462 (528)
T 1q6z_A 392 PGSYYFCAAGGLGFALPAAIGVQLAEPERQVIAV-IGDGSANYSISALWT-AAQYN------IPT-IFVIMNNGTYGALR 462 (528)
T ss_dssp SSCEEECTTCCTTSHHHHHHHHHHHCTTSCEEEE-EEHHHHTTTGGGHHH-HHHHT------CCC-EEEEEECSBCHHHH
T ss_pred CCcEECCCCccccchHHHHHHHHHhCCCCcEEEE-ECCcHHHhhHHHHHH-HHHhC------CCe-EEEEEeCCcchHhH
Confidence 56777632 11124566778887753 3556664 44421 122333332 34434 366 565555543211
Q ss_pred ------CC----CCC-CCchHHHHHcCCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 018167 160 ------HG----GHY-HSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (360)
Q Consensus 160 ------~~----g~~-Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~a~~~~~P~~i 206 (360)
.+ ++. |...-..+.++. |+..+...+++|+..+++.+.+.++|++|
T Consensus 463 ~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~li 519 (528)
T 1q6z_A 463 WFAGVLEAENVPGLDVPGIDFRALAKGY-GVQALKADNLEQLKGSLQEALSAKGPVLI 519 (528)
T ss_dssp HHHHHHTCCSCCSCBCCCCCHHHHHHHH-TCEEEEESSHHHHHHHHHHHHTCSSCEEE
T ss_pred HHHHHhcCCCcccCCCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHHCCCcEEE
Confidence 00 111 222222333443 66777778999999999999998999988
No 83
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=51.55 E-value=39 Score=28.80 Aligned_cols=60 Identities=10% Similarity=-0.009 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHH
Q 018167 252 IMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASIL 314 (360)
Q Consensus 252 ~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~ 314 (360)
.+..+++.+++.|.+++++|+.. +.|.+.+++.+...+.||+.=-- ..+++-+.+..++-
T Consensus 35 l~~~~~~~~~~~g~~v~~~dL~~--~~d~~~~~~~l~~AD~iV~~~P~-y~~s~pa~LK~~iD 94 (204)
T 2amj_A 35 LTEVADGTLRDLGHDVRIVRADS--DYDVKAEVQNFLWADVVIWQMPG-WWMGAPWTVKKYID 94 (204)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSS--CCCHHHHHHHHHHCSEEEEEEEC-BTTBCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEeCCc--cccHHHHHHHHHhCCEEEEECCc-cccCCCHHHHHHHH
Confidence 44455666777799999999985 67888888999999988776443 35777777766664
No 84
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=51.38 E-value=24 Score=27.94 Aligned_cols=63 Identities=13% Similarity=-0.010 Sum_probs=40.0
Q ss_pred echhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHh-cCCeEEEEeCCCcC--CchHHHHHHHHHH
Q 018167 246 WGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR-KTGRLLISHEAPVT--GGFGAEISASILE 315 (360)
Q Consensus 246 ~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~-~~~~ivvvEe~~~~--GGlgs~v~~~l~~ 315 (360)
+|++-..|...++.|++.|++++++|+....+-+ +. +++.+|+.---+-. |.+-..+..++..
T Consensus 12 tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~~~~~-------l~~~~d~ii~g~pty~~~~G~~p~~~~~fl~~ 77 (148)
T 3f6r_A 12 TGNTESIAQKLEELIAAGGHEVTLLNAADASAEN-------LADGYDAVLFGCSAWGMEDLEMQDDFLSLFEE 77 (148)
T ss_dssp SSHHHHHHHHHHHHHHTTTCEEEEEETTTBCCTT-------TTTTCSEEEEEECEECSSSCEECHHHHHHHTT
T ss_pred CchHHHHHHHHHHHHHhCCCeEEEEehhhCCHhH-------hcccCCEEEEEecccCCCCCCCcHHHHHHHHH
Confidence 4566666777777788889999999988765432 22 56666665432222 4566666666643
No 85
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=51.38 E-value=29 Score=31.60 Aligned_cols=75 Identities=15% Similarity=-0.005 Sum_probs=48.1
Q ss_pred CcEEEEEec-----hhHHHHHHHHHHHHhcCCCeeEEEeccccCC-------c--HHHHHHHHhcCCeEEEEeCCCcCCc
Q 018167 239 SDITLVGWG-----AQLSIMEQACLDAEKEGISCELIDLKTLIPW-------D--KETVEASVRKTGRLLISHEAPVTGG 304 (360)
Q Consensus 239 ~dv~Iia~G-----~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~-------d--~~~l~~~~~~~~~ivvvEe~~~~GG 304 (360)
.+|++|... .....+..+++.+++.|.+++++|+..+... + .+.+.+.+...+.+|++-- ...++
T Consensus 59 mKILiI~GS~R~~S~T~~La~~~~~~l~~~G~eveiidL~dlpl~~~d~~~~~d~v~~l~e~I~~ADgiV~aSP-~Yn~s 137 (279)
T 2fzv_A 59 VRILLLYGSLRARSFSRLAVEEAARLLQFFGAETRIFDPSDLPLPDQVQSDDHPAVKELRALSEWSEGQVWCSP-ERHGQ 137 (279)
T ss_dssp CEEEEEESCCSSSCHHHHHHHHHHHHHHHTTCEEEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHHCSEEEEEEE-EETTE
T ss_pred CEEEEEEeCCCCCCHHHHHHHHHHHHHhhCCCEEEEEehhcCCCCccCccCCCHHHHHHHHHHHHCCeEEEEcC-ccccC
Confidence 356555422 2345566677778778999999999886422 2 3456777778888777643 23567
Q ss_pred hHHHHHHHHH
Q 018167 305 FGAEISASIL 314 (360)
Q Consensus 305 lgs~v~~~l~ 314 (360)
+...+..++-
T Consensus 138 ipg~LKn~ID 147 (279)
T 2fzv_A 138 ITSVMKAQID 147 (279)
T ss_dssp ECHHHHHHHH
T ss_pred cCHHHHHHHH
Confidence 7666666553
No 86
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=51.35 E-value=17 Score=36.81 Aligned_cols=111 Identities=14% Similarity=0.071 Sum_probs=64.1
Q ss_pred CCcEEechh--HHHHHHHHHHHHhcCC-CeeEEEecCcc--cHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCC-
Q 018167 85 KSRVFNTPL--CEQGIVGFAIGLAAMG-NRAIAEIQFAD--YIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV- 158 (360)
Q Consensus 85 p~r~i~~GI--aE~~~vg~AaGlA~~G-~~p~~~~~f~~--F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~- 158 (360)
|.+|++.|- +--..++.|.|+|+.. -++++++ ..+ |.+ .+..+-+ ++..+ +|+ .+|+...+++.
T Consensus 432 ~~~~~~~g~~G~~G~~l~~AiGaala~~~~~vv~i-~GDGs~~~-~~~~L~t-a~~~~------l~~-~ivv~NN~~~~~ 501 (616)
T 2pan_A 432 DRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAI-SGDFDFQF-LIEELAV-GAQFN------IPY-IHVLVNNAYLGL 501 (616)
T ss_dssp TTSEEECTTTCCTTCHHHHHHHHHHHCTTCEEEEE-EEHHHHHH-TGGGHHH-HHHTT------CCC-EEEEEECSBCHH
T ss_pred CCeEEcCCCcccccchHHHHHHHHHhCCCCcEEEE-EcchhhhC-CHHHHHH-HHHhC------CCe-EEEEEECCcchH
Confidence 678999653 1223677888888763 3566664 444 332 2333432 44444 466 56666554331
Q ss_pred ---------CC-------CC---CCC--CchHH-HHHcCCCCcEEEeeCCHHHHHHHHHHhHh----CCCCEEE
Q 018167 159 ---------GH-------GG---HYH--SQSPE-AFFCHVPGLKVVIPRSPRQAKGLLLSCIR----DPNPVVF 206 (360)
Q Consensus 159 ---------g~-------~g---~~H--s~~d~-a~~r~iPn~~V~~P~d~~e~~~~l~~a~~----~~~P~~i 206 (360)
+. .+ +.| ...|+ .+.++. |+..+...++.|+..+++.+++ .++|++|
T Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~~~~gp~lI 574 (616)
T 2pan_A 502 IRQSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGL-GCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVV 574 (616)
T ss_dssp HHHHGGGGTCCCSCBCCCCCTTCGGGTTCCCCHHHHHHHT-TCEEEEECSGGGHHHHHHHHHHHHHHHCSCEEE
T ss_pred HHHHHHHhcCCccccccccccccccCCCCCCCHHHHHHHc-CCeEEEECCHHHHHHHHHHHHhhcccCCCcEEE
Confidence 00 01 111 01233 333443 6666677899999999999988 7899988
No 87
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=51.03 E-value=22 Score=26.93 Aligned_cols=68 Identities=16% Similarity=0.140 Sum_probs=43.3
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHh-cCCeEEEEeCCCcCCchHH
Q 018167 238 GSDITLVGWG----AQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR-KTGRLLISHEAPVTGGFGA 307 (360)
Q Consensus 238 G~dv~Iia~G----~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~-~~~~ivvvEe~~~~GGlgs 307 (360)
..+|+|.+.| ..-..|.+|.+.|++.|++.+.+|+.. .|--.+.+.+... .+-..|++. +...||+..
T Consensus 14 ~~~vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i~~~~vdi~~-~~~~~~~l~~~~g~~~vP~ifi~-g~~igG~d~ 86 (109)
T 1wik_A 14 KASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILE-DEEVRQGLKTFSNWPTYPQLYVR-GDLVGGLDI 86 (109)
T ss_dssp TSSEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSS-CHHHHHHHHHHHSCCSSCEEECS-SSEEECHHH
T ss_pred cCCEEEEEecCCCCCCCchHHHHHHHHHHcCCCeEEEECCC-CHHHHHHHHHHhCCCCCCEEEEC-CEEEcCHHH
Confidence 4568899887 455678889999999999999999875 1211122332222 222345554 446788754
No 88
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=50.95 E-value=26 Score=27.31 Aligned_cols=41 Identities=10% Similarity=0.083 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcC
Q 018167 249 QLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKT 290 (360)
Q Consensus 249 ~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~ 290 (360)
.-..|.+|.+.|++.|++.+++|+.. .|.+.+.|.+.+++.
T Consensus 9 ~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~el~~~l~~~ 49 (120)
T 3l78_A 9 SCTSCRKARAWLNRHDVVFQEHNIMT-SPLSRDELLKILSYT 49 (120)
T ss_dssp SCHHHHHHHHHHHHTTCCEEEEETTT-SCCCHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHcCCCeEEEeccc-CCCcHHHHHHHHhhc
Confidence 35678889999999999999999876 788888888877643
No 89
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=50.84 E-value=95 Score=24.90 Aligned_cols=105 Identities=10% Similarity=0.103 Sum_probs=62.7
Q ss_pred cEEEEEech-hHHHHHHHHHHHHhcCCCeeEEEeccccCCcH--HHHHHHHhc-----CCeEEEE-eCCCcCCchHHHHH
Q 018167 240 DITLVGWGA-QLSIMEQACLDAEKEGISCELIDLKTLIPWDK--ETVEASVRK-----TGRLLIS-HEAPVTGGFGAEIS 310 (360)
Q Consensus 240 dv~Iia~G~-~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~--~~l~~~~~~-----~~~ivvv-Ee~~~~GGlgs~v~ 310 (360)
.++|++.|. ......++++.+-.+ -.+..+|++-=...+. +.+.+.+++ .+.|+++ +- |.+.. ++
T Consensus 6 giiIvtHG~s~A~~l~~~a~~i~G~-~~~~aid~~~~~~~~~~~~~i~~~i~~~~~d~g~GVLiL~Dm----GSp~n-~a 79 (139)
T 3gdw_A 6 GVFVLMHGDSTASSMLKTAQELLGT-SIGTAMNMPLTMEVQTMYEQLRNQVITQKESLNNGILLLTDM----GSLNS-FG 79 (139)
T ss_dssp EEEEEEESSSHHHHHHHHHHHHHTC-CCCEEEEECTTSCHHHHHHHHHHHHHTSTGGGTTCEEEEECS----GGGGG-HH
T ss_pred eEEEEcCCHHHHHHHHHHHHHHcCc-ccEEEEEccCCCCHHHHHHHHHHHHHhhcCCCCCCEEEEEeC----CCHHH-HH
Confidence 488999999 888888999987644 5677787765443332 445556644 3445544 54 43332 33
Q ss_pred HHHHHhccccCCCceEEEecCCCCcc-c-cc-cccCCCCHHHHHHHHH
Q 018167 311 ASILERCFLRLEAPVARVCGLDTPFP-L-VF-EPFYMPTKNKILDAIK 355 (360)
Q Consensus 311 ~~l~~~~~~~l~~~~~~i~~~~~~~~-~-~~-e~~gl~~~~~I~~~i~ 355 (360)
..+.+.. ..++.-+.+.+.|.- + .. ...+. +-+.|++.+.
T Consensus 80 ~~l~~~~----~~~v~vI~gvnlpmllea~~~~~~~~-~L~el~~~~~ 122 (139)
T 3gdw_A 80 NMLFEET----GIRTKAITMTSTMIVLEAIRMASVGR-SLEDIYQNIQ 122 (139)
T ss_dssp HHHHHHH----CCCEEEECSCCHHHHHHHHHHHHTTC-CHHHHHHHHH
T ss_pred HHHHHhh----CCCEEEEeCCCHHHHHHHHHHhhcCC-CHHHHHHHHH
Confidence 3344321 346777776665421 1 11 13466 8899998883
No 90
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=50.69 E-value=19 Score=27.62 Aligned_cols=65 Identities=20% Similarity=0.181 Sum_probs=43.5
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHH---HHHHHh-cCCeEEEEeCCCcCCchHH
Q 018167 238 GSDITLVGWG----AQLSIMEQACLDAEKEGISCELIDLKTLIPWDKET---VEASVR-KTGRLLISHEAPVTGGFGA 307 (360)
Q Consensus 238 G~dv~Iia~G----~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~---l~~~~~-~~~~ivvvEe~~~~GGlgs 307 (360)
...|+|.+-| +.-..|.+|.+.|++.|++.+.+|+.. |.+. +.+... .+-..|.+.. ...||+..
T Consensus 15 ~~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~y~~~di~~----d~~~~~~l~~~~g~~tvP~ifi~g-~~iGG~d~ 87 (111)
T 3zyw_A 15 AAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFS----DEEVRQGLKAYSSWPTYPQLYVSG-ELIGGLDI 87 (111)
T ss_dssp SSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGG----CHHHHHHHHHHHTCCSSCEEEETT-EEEECHHH
T ss_pred cCCEEEEEecCCCCCcchhHHHHHHHHHHcCCCeEEEECcC----CHHHHHHHHHHHCCCCCCEEEECC-EEEecHHH
Confidence 4578888876 345788899999999999999999876 3332 322221 2334566654 45788754
No 91
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=50.18 E-value=20 Score=28.18 Aligned_cols=49 Identities=14% Similarity=0.194 Sum_probs=38.9
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCC
Q 018167 241 ITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTG 291 (360)
Q Consensus 241 v~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~ 291 (360)
++|.++ +.-..|.+|.+.|++.|++.+.+|+.. .|.+.+.|.+.++..+
T Consensus 7 i~iY~~-p~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~eL~~~l~~~g 55 (121)
T 3rdw_A 7 VTIYHN-PRCSKSRETLALVEQQGITPQVVLYLE-TPPSVDKLKELLQQLG 55 (121)
T ss_dssp CEEECC-TTCHHHHHHHHHHHTTTCCCEEECTTT-SCCCHHHHHHHHHHTT
T ss_pred EEEEEC-CCCHHHHHHHHHHHHcCCCcEEEeecc-CCCcHHHHHHHHHhcC
Confidence 444443 335688899999999999999999987 7889998888877665
No 92
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=50.07 E-value=36 Score=28.19 Aligned_cols=67 Identities=13% Similarity=0.156 Sum_probs=39.9
Q ss_pred chhHHHHHHHHHHHHhc------CCCeeEEEecc--ccCCcH--------------------HHHHHHHhcCCeEEEEeC
Q 018167 247 GAQLSIMEQACLDAEKE------GISCELIDLKT--LIPWDK--------------------ETVEASVRKTGRLLISHE 298 (360)
Q Consensus 247 G~~~~~al~Aa~~L~~~------Gi~v~Vi~~~~--ikP~d~--------------------~~l~~~~~~~~~ivvvEe 298 (360)
|.+...+..+++.|++. |.+++++|+.. +.|++. +.+.+.+..+..||++=-
T Consensus 14 ~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~iI~~sP 93 (191)
T 1t0i_A 14 RVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQQIALPLYEDDDELIPAQIKSVDEYADSKTRSWSRIVNALDIIVFVTP 93 (191)
T ss_dssp CSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHHHHCCCSSCCCCCSCGGGCCSGGGCSCHHHHHHHHHHHTCSEEEEEEE
T ss_pred CchHHHHHHHHHHHHHhhccCCCCceEEEEehhhcCCCCCCCccccccccccCcccCCcHHHHHHHHHHHhCCEEEEEec
Confidence 44445566666777765 78999999886 333321 345566666676665533
Q ss_pred CCcCCchHHHHHHHHH
Q 018167 299 APVTGGFGAEISASIL 314 (360)
Q Consensus 299 ~~~~GGlgs~v~~~l~ 314 (360)
- ..+++-+.+..++.
T Consensus 94 ~-y~~~~p~~lK~~iD 108 (191)
T 1t0i_A 94 Q-YNWGYPAALKNAID 108 (191)
T ss_dssp C-BTTBCCHHHHHHHH
T ss_pred e-ECCCCCHHHHHHHH
Confidence 2 34666666665553
No 93
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=49.69 E-value=14 Score=37.04 Aligned_cols=110 Identities=10% Similarity=-0.039 Sum_probs=62.4
Q ss_pred CCcEEec---hhHHHHHHHHHHHHhcCC-CeeEEEecCcc--cHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCC
Q 018167 85 KSRVFNT---PLCEQGIVGFAIGLAAMG-NRAIAEIQFAD--YIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158 (360)
Q Consensus 85 p~r~i~~---GIaE~~~vg~AaGlA~~G-~~p~~~~~f~~--F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~ 158 (360)
|.+|+.. |.- -..++.|.|+|+.. -++++++ ..+ |.+ .+..+- .++..+ +|+ .+|+...+++.
T Consensus 426 ~~~~~~~~g~g~m-G~~l~~AiGaa~a~~~~~vv~i-~GDG~~~~-~~~~L~-~a~~~~------l~~-~ivv~NN~~~~ 494 (573)
T 2iht_A 426 PFGFLTSAGCSSF-GYGIPAAIGAQMARPDQPTFLI-AGDGGFHS-NSSDLE-TIARLN------LPI-VTVVVNNDTNG 494 (573)
T ss_dssp TTSEECCSSSCCT-TCHHHHHHHHHHHSTTSCEEEE-EEHHHHHH-TGGGHH-HHHHHT------CCC-EEEEEECSBCH
T ss_pred CCeEEcCCCCccc-ccHHHHHHHHHHhCCCCcEEEE-EccHHHHh-HHHHHH-HHHHhC------CCe-EEEEEECCcch
Confidence 6778864 211 23567888888763 3555554 444 322 233333 244434 356 55655554431
Q ss_pred --CC------C---C--CCCCchHH-HHHcCCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 018167 159 --GH------G---G--HYHSQSPE-AFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (360)
Q Consensus 159 --g~------~---g--~~Hs~~d~-a~~r~iPn~~V~~P~d~~e~~~~l~~a~~~~~P~~i 206 (360)
+. + + ......|+ .+.++. |+..+...+..|+..+++.+.+.++|++|
T Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~li 555 (573)
T 2iht_A 495 LIELYQNIGHHRSHDPAVKFGGVDFVALAEAN-GVDATRATNREELLAALRKGAELGRPFLI 555 (573)
T ss_dssp HHHHHHHHHHSSCCGGGTBCCCCCHHHHHHHT-TCEEEECCSHHHHHHHHHHHHTSSSCEEE
T ss_pred hhHHHHHHhcCCCcCccccCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEE
Confidence 10 0 1 11111233 333444 67777789999999999999988999988
No 94
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=48.29 E-value=20 Score=36.01 Aligned_cols=29 Identities=3% Similarity=-0.097 Sum_probs=26.2
Q ss_pred CcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 018167 178 GLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (360)
Q Consensus 178 n~~V~~P~d~~e~~~~l~~a~~~~~P~~i 206 (360)
|+.-+...++.|+..+++++++.++|++|
T Consensus 526 G~~~~~v~~~~el~~al~~a~~~~gp~li 554 (578)
T 3lq1_A 526 DADYHEAKSVDELEEAIDKASYHKGLDII 554 (578)
T ss_dssp TCEEEECCSHHHHHHHHHHHTTSSSEEEE
T ss_pred CCceEecCCHHHHHHHHHHHHhCCCCEEE
Confidence 56778889999999999999999999998
No 95
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=47.99 E-value=9.9 Score=38.46 Aligned_cols=99 Identities=13% Similarity=0.093 Sum_probs=54.9
Q ss_pred HHHHHHHHHhcCCCeeEEEecCcc--cHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCC-----------
Q 018167 97 GIVGFAIGLAAMGNRAIAEIQFAD--YIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGH----------- 163 (360)
Q Consensus 97 ~~vg~AaGlA~~G~~p~~~~~f~~--F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~----------- 163 (360)
..++.|.|+|+..-++++++ ..+ |.+ .+..+- .+...+ +|+ .+|+...+++.-....
T Consensus 459 ~~l~~AiGaala~~~~vv~i-~GDGsf~~-~~~eL~-ta~~~~------lp~-~ivv~NN~~~~i~~~~~~~q~~~~~~~ 528 (604)
T 2x7j_A 459 GVVSSAMGVCEGTKAPVTLV-IGDLSFYH-DLNGLL-AAKKLG------IPL-TVILVNNDGGGIFSFLPQASEKTHFED 528 (604)
T ss_dssp SHHHHHHHHHHHHTSCEEEE-EEHHHHHH-TGGGGH-HHHHHC------CCE-EEEEEECSSCGGGGGSGGGSCHHHHHH
T ss_pred cHHHHHHHHHhcCCCcEEEE-EccHHHHh-HHHHHH-HhhhcC------CCe-EEEEEeCCCCcccccCCCCccchhhHh
Confidence 35777888777634566664 444 332 233332 244444 466 5665555443211100
Q ss_pred ----CCCchHHHHHcCCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 018167 164 ----YHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (360)
Q Consensus 164 ----~Hs~~d~a~~r~iPn~~V~~P~d~~e~~~~l~~a~~~~~P~~i 206 (360)
.|...-..+.++. |+..+...++.|+..+++.+++.++|++|
T Consensus 529 ~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~li 574 (604)
T 2x7j_A 529 LFGTPTGLDFKHAAALY-GGTYSCPASWDEFKTAYAPQADKPGLHLI 574 (604)
T ss_dssp HTTCCCCCCTHHHHHHT-TCEEECCSSHHHHHHHCCCCCSSCCEEEE
T ss_pred hccCCCCCCHHHHHHHc-CCeEEecCCHHHHHHHHHHHHhCCCCEEE
Confidence 0111111222222 67788889999999999888877899988
No 96
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=47.69 E-value=22 Score=27.83 Aligned_cols=49 Identities=12% Similarity=-0.024 Sum_probs=38.3
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCC
Q 018167 241 ITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTG 291 (360)
Q Consensus 241 v~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~ 291 (360)
++|.++ +.-..|.+|.+.|++.|++.+++|+.. .|.+.+.|.+.+++.+
T Consensus 6 i~iY~~-p~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~eL~~~l~~~g 54 (120)
T 3gkx_A 6 TLFLQY-PACSTCQKAKKWLIENNIEYTNRLIVD-DNPTVEELKAWIPLSG 54 (120)
T ss_dssp CEEEEC-TTCHHHHHHHHHHHHTTCCCEEEETTT-TCCCHHHHHHHHHHHT
T ss_pred EEEEEC-CCChHHHHHHHHHHHcCCceEEEeccc-CcCCHHHHHHHHHHcC
Confidence 444443 345688899999999999999999987 7889988888777554
No 97
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=47.40 E-value=52 Score=32.52 Aligned_cols=112 Identities=12% Similarity=0.006 Sum_probs=60.5
Q ss_pred CCcEEechh--HHHHHHHHHHHHhcCC-CeeEEEecCcccH-HHHHHHHHHHHHhcccccCCCccccceEEEcCCCCC--
Q 018167 85 KSRVFNTPL--CEQGIVGFAIGLAAMG-NRAIAEIQFADYI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV-- 158 (360)
Q Consensus 85 p~r~i~~GI--aE~~~vg~AaGlA~~G-~~p~~~~~f~~F~-~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~-- 158 (360)
|.+|+..+- +=-..++.|.|+|+.. -++++++ ..+-. +..+..+-+ +...+ +|+ .+|+...+++.
T Consensus 398 ~~~~~~~~~~g~mG~~l~~A~G~a~a~~~~~vv~~-~GDG~~~~~~~el~t-a~~~~------l~~-~ivv~nN~~~~~~ 468 (552)
T 1ovm_A 398 DVNFIVQPLWGSIGYTLAAAFGAQTACPNRRVIVL-TGDGAAQLTIQELGS-MLRDK------QHP-IILVLNNEGYTVE 468 (552)
T ss_dssp SCEEECCTTTCCTTHHHHHHHHHHHHCTTSCEEEE-EEHHHHHHHTTHHHH-HHHTT------CCC-EEEEEESSSCHHH
T ss_pred CCeEEechhhHhhhhHHHHHHHHHHhCCCCcEEEE-ECchHHHhHHHHHHH-HHHhC------CCC-EEEEEECCCCeEE
Confidence 456765220 1124567788877753 3555554 44421 223343433 44434 466 56656554431
Q ss_pred ----CCCCC--CCCchHHH-HHcCCCCc----EEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 018167 159 ----GHGGH--YHSQSPEA-FFCHVPGL----KVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (360)
Q Consensus 159 ----g~~g~--~Hs~~d~a-~~r~iPn~----~V~~P~d~~e~~~~l~~a~~~~~P~~i 206 (360)
+.... .....|+. +.++. |+ ..+...+..|+..+++.+.+.++|++|
T Consensus 469 ~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~~~~~v~~~~~l~~al~~a~~~~gp~li 526 (552)
T 1ovm_A 469 RAIHGAEQRYNDIALWNWTHIPQAL-SLDPQSECWRVSEAEQLADVLEKVAHHERLSLI 526 (552)
T ss_dssp HHHSCTTCGGGCCCCCCGGGSTTTS-CSSCCEEEEEECBHHHHHHHHHHHTTCSSEEEE
T ss_pred EeeccCCCCcccCCCCCHHHHHHHh-CCCcCCCEEEeCCHHHHHHHHHHHHhCCCCEEE
Confidence 11110 00112333 22332 56 777788999999999999888999988
No 98
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=46.89 E-value=61 Score=30.27 Aligned_cols=74 Identities=12% Similarity=0.093 Sum_probs=47.6
Q ss_pred eeCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEecc-------------ccCCcHHHHHHHHhcCCeEEEEeCCCcC
Q 018167 236 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKT-------------LIPWDKETVEASVRKTGRLLISHEAPVT 302 (360)
Q Consensus 236 ~~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~-------------ikP~d~~~l~~~~~~~~~ivvvEe~~~~ 302 (360)
..|+.+.|++.|... ...++.+++.|+++-++|... ....|.+.+.+.+++.+ +|+.|-..
T Consensus 12 ~~~k~IlIlG~G~~g---~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~d-vI~~~~e~-- 85 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLG---RMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISD-VVTYEFEN-- 85 (389)
T ss_dssp CTTSEEEEECCSHHH---HHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCS-EEEESCCC--
T ss_pred CCCCEEEEECCCHHH---HHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCC-Eeeecccc--
Confidence 357789999999854 444555556799999998642 13456677888887765 56765433
Q ss_pred CchHHHHHHHHHHhc
Q 018167 303 GGFGAEISASILERC 317 (360)
Q Consensus 303 GGlgs~v~~~l~~~~ 317 (360)
+...+++.+.+.+
T Consensus 86 --~~~~~~~~l~~~g 98 (389)
T 3q2o_A 86 --IDYRCLQWLEKHA 98 (389)
T ss_dssp --CCHHHHHHHHHHS
T ss_pred --ccHHHHHHHHhhC
Confidence 2334455555543
No 99
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=46.46 E-value=19 Score=30.24 Aligned_cols=64 Identities=17% Similarity=0.190 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEeccccCC-----------cHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHH
Q 018167 250 LSIMEQACLDAEKEGISCELIDLKTLIPW-----------DKETVEASVRKTGRLLISHEAPVTGGFGAEISASILE 315 (360)
Q Consensus 250 ~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~-----------d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~ 315 (360)
...|..+++.++ .|.+++++|+..+..+ |.+.+.+.+..++.||+.-- ...+++-..+..++..
T Consensus 23 ~~la~~i~~~l~-~g~~v~~~dl~~~p~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~~sP-~y~~~~p~~lK~~iD~ 97 (193)
T 1rtt_A 23 SAALQEAIGLVP-PGMSIELADISGIPLYNEDVYALGFPPAVERFREQIRAADALLFATP-EYNYSMAGVLKNAIDW 97 (193)
T ss_dssp HHHHHHHHTTCC-TTCEEEECCCTTCCCCCHHHHTTCCCHHHHHHHHHHHHCSEEEEECC-EETTEECHHHHHHHHH
T ss_pred HHHHHHHHHhcc-CCCeEEEEeHHHCCCCCccccccCCCHHHHHHHHHHHhCCEEEEEcc-ccccCcCHHHHHHHHH
Confidence 334444445555 5889999999875333 22345566667777666532 3456666666655543
No 100
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=46.04 E-value=16 Score=28.65 Aligned_cols=42 Identities=17% Similarity=0.150 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCC
Q 018167 249 QLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTG 291 (360)
Q Consensus 249 ~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~ 291 (360)
.-..|.+|.+.|++.|++.+++|+.. .|.+.+.|.+.+++.+
T Consensus 13 ~C~~c~ka~~~L~~~gi~~~~~di~~-~~~t~~eL~~~l~~~g 54 (119)
T 3f0i_A 13 KCSKSRETLALLENQGIAPQVIKYLE-TSPSVEELKRLYQQLG 54 (119)
T ss_dssp TCHHHHHHHHHHHHTTCCCEEECHHH-HCCCHHHHHHHHHHHT
T ss_pred CChHHHHHHHHHHHcCCceEEEEecc-CcCcHHHHHHHHHHcC
Confidence 35688899999999999999999987 7888888887776654
No 101
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=45.73 E-value=35 Score=33.93 Aligned_cols=111 Identities=14% Similarity=0.176 Sum_probs=62.4
Q ss_pred CCcEEechh--HHHHHHHHHHHHhcCCCeeEEEecCcc--cHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCC-CC
Q 018167 85 KSRVFNTPL--CEQGIVGFAIGLAAMGNRAIAEIQFAD--YIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA-VG 159 (360)
Q Consensus 85 p~r~i~~GI--aE~~~vg~AaGlA~~G~~p~~~~~f~~--F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~-~g 159 (360)
|.++++.|. +=-..++.|.|+++..-++++++ ..+ |.+ .+..+- .+...+ +|+ .+|+...++. .+
T Consensus 411 p~~~~~~g~~g~~G~~l~~AiGaa~a~~~~vv~i-~GDGsf~~-~~~el~-ta~~~~------l~~-~ivv~NN~~~~~~ 480 (564)
T 2q28_A 411 PRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAI-EGDSAFGF-SGMEIE-TICRYN------LPV-TIVIFNNGGIYRG 480 (564)
T ss_dssp SSCEEESTTTTCTTCHHHHHHHHHHHHCSCEEEE-EEHHHHHT-TGGGHH-HHHHTT------CCE-EEEEEECSBSSCS
T ss_pred CCeEecCCCCCcccchHHHHHHHhhcCCCcEEEE-EcchHhhc-cHHHHH-HHHHhC------CCe-EEEEEeCchhHHH
Confidence 778887543 11235677777777644555554 444 322 222232 244433 466 5666665552 22
Q ss_pred CC------CC-C----CCchHHH-HHcCCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 018167 160 HG------GH-Y----HSQSPEA-FFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (360)
Q Consensus 160 ~~------g~-~----Hs~~d~a-~~r~iPn~~V~~P~d~~e~~~~l~~a~~~~~P~~i 206 (360)
.. +. . ....|+. +.++. |+..+...++.|+..+++++++.++|++|
T Consensus 481 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~p~li 538 (564)
T 2q28_A 481 DGVDLSGAGAPSPTDLLHHARYDKLMDAF-RGVGYNVTTTDELRHALTTGIQSRKPTII 538 (564)
T ss_dssp CCCCTTSSCCCCTTBCCTTCCGGGGGGGG-TCEEEEECSHHHHHHHHHHHHHHTSCEEE
T ss_pred HHHHHhccCCccccccCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEE
Confidence 10 10 0 0012332 22332 66777889999999999999988999988
No 102
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=45.68 E-value=35 Score=28.69 Aligned_cols=83 Identities=7% Similarity=-0.079 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhHhCCCCEEEeccccccccCcccCCCCCcccCC-C---ceEEeeeCCcEEEEEechhHHHHHHHHHHHHh
Q 018167 187 PRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPL-S---EAEVIREGSDITLVGWGAQLSIMEQACLDAEK 262 (360)
Q Consensus 187 ~~e~~~~l~~a~~~~~P~~i~~~k~l~r~~~~~v~~~~~~~~~-G---k~~vl~~G~dv~Iia~G~~~~~al~Aa~~L~~ 262 (360)
-+++..++-+|+..++-+|++-.-...--..+.++. ..+++- + ....++++.-+.|++....-..+.+.|.++++
T Consensus 24 I~~AA~llaqai~~~g~IyvfG~Ghs~~~~~e~~~~-~e~l~~~~~~~~~~~i~~~D~vii~S~Sg~n~~~ie~A~~ake 102 (170)
T 3jx9_A 24 LFDVVRLLAQALVGQGKVYLDAYGEFEGLYPMLSDG-PDQMKRVTKIKDHKTLHAVDRVLIFTPDTERSDLLASLARYDA 102 (170)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECGGGGGGTHHHHTS-TTCCTTEEECCTTCCCCTTCEEEEEESCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCcHHHHHHHHHcc-cCCccchhhhhhcCCCCCCCEEEEEeCCCCCHHHHHHHHHHHH
Confidence 467788888999999999996221100000000110 011100 0 01245666777777777777778999999999
Q ss_pred cCCCeeEE
Q 018167 263 EGISCELI 270 (360)
Q Consensus 263 ~Gi~v~Vi 270 (360)
+|+++-.|
T Consensus 103 ~G~~vIaI 110 (170)
T 3jx9_A 103 WHTPYSII 110 (170)
T ss_dssp HTCCEEEE
T ss_pred CCCcEEEE
Confidence 98776444
No 103
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=44.79 E-value=30 Score=27.31 Aligned_cols=44 Identities=11% Similarity=0.086 Sum_probs=29.4
Q ss_pred chhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhc-CCeEEEEe
Q 018167 247 GAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRK-TGRLLISH 297 (360)
Q Consensus 247 G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~-~~~ivvvE 297 (360)
|++-..|...++.|++.|++++++++....|-+ +.. +..+|++-
T Consensus 12 Gnt~~~a~~i~~~l~~~g~~v~~~~~~~~~~~~-------l~~~~d~ii~~~ 56 (147)
T 1f4p_A 12 GNTEYTAETIARELADAGYEVDSRDAASVEAGG-------LFEGFDLVLLGC 56 (147)
T ss_dssp SHHHHHHHHHHHHHHHHTCEEEEEEGGGCCSTT-------TTTTCSEEEEEE
T ss_pred CHHHHHHHHHHHHHHhcCCeeEEEehhhCCHHH-------hcCcCCEEEEEe
Confidence 555556666667777779999999988765432 345 66666653
No 104
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=43.93 E-value=93 Score=27.08 Aligned_cols=53 Identities=8% Similarity=0.040 Sum_probs=34.8
Q ss_pred CcEEEEEechhHHHHHHHHHHHHh---cCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeC
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEK---EGISCELIDLKTLIPWDKETVEASVRKTGRLLISHE 298 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~---~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe 298 (360)
..-++|-||+++..+.+.|+.|.+ .|++++|+++....+ +. +.+...+|++--
T Consensus 40 ~~kv~IlYgS~tGnte~~A~~La~~l~~g~~v~v~~l~~~~~---~~----l~~~~~vI~~ts 95 (219)
T 3hr4_A 40 RVRVTILFATETGKSEALAWDLGALFSCAFNPKVVCMDKYRL---SC----LEEERLLLVVTS 95 (219)
T ss_dssp SCEEEEEEECSSSHHHHHHHHHHHHHTTTSEEEEEEGGGCCG---GG----GGTCSEEEEEEE
T ss_pred CCcEEEEEECCchHHHHHHHHHHHHHHcCCCeEEEEcccCCH---hH----hccCCeEEEEEe
Confidence 334566789988888888887754 488888888776543 11 335566666643
No 105
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=43.86 E-value=28 Score=28.45 Aligned_cols=39 Identities=8% Similarity=-0.042 Sum_probs=31.8
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccc
Q 018167 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTL 275 (360)
Q Consensus 237 ~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~i 275 (360)
..+++++||-|+.+...+..++.|.++|.++.++..|+-
T Consensus 22 ~~~~~llIaGG~GItPl~sm~~~l~~~~~~v~l~g~r~~ 60 (158)
T 3lrx_A 22 KFGKILAIGAYTGIVEVYPIAKAWQEIGNDVTTLHVTFE 60 (158)
T ss_dssp CCSEEEEEEETTHHHHHHHHHHHHHHHTCEEEEEEECBG
T ss_pred CCCeEEEEEccCcHHHHHHHHHHHHhcCCcEEEEEeCCH
Confidence 457899999999999998888888777878888855554
No 106
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=43.36 E-value=11 Score=29.40 Aligned_cols=35 Identities=26% Similarity=0.262 Sum_probs=25.6
Q ss_pred eeCCcEEEEE-ech--hHHHHHHHHHHHHhcCCCeeEE
Q 018167 236 REGSDITLVG-WGA--QLSIMEQACLDAEKEGISCELI 270 (360)
Q Consensus 236 ~~G~dv~Iia-~G~--~~~~al~Aa~~L~~~Gi~v~Vi 270 (360)
++|++|++++ .|. +.....+.++.+.+.|+++++|
T Consensus 77 ~~G~~V~~l~d~GdP~i~~~~~~l~~~~~~~gi~v~vi 114 (117)
T 3hh1_A 77 EEGSDVALVTDAGTPAISDPGYTMASAAHAAGLPVVPV 114 (117)
T ss_dssp HTTCCEEEEEETTSCGGGSTTHHHHHHHHHTTCCEEEE
T ss_pred HCCCeEEEEecCCcCeEeccHHHHHHHHHHCCCcEEEe
Confidence 5789999999 674 2344555666677789999887
No 107
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=43.24 E-value=55 Score=27.73 Aligned_cols=62 Identities=6% Similarity=0.131 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEeccccCCcH----------HHHHHHHhcCCeEEEEeCCCcCCchHHHHHHH
Q 018167 250 LSIMEQACLDAEKEGISCELIDLKTLIPWDK----------ETVEASVRKTGRLLISHEAPVTGGFGAEISAS 312 (360)
Q Consensus 250 ~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~----------~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~ 312 (360)
.....+++..+.++|.+++++|+.-|-.||. +.+.+.++..+.+|++--- ..|++...+..+
T Consensus 18 ~~~la~~~~~~~~~~~~~~~idl~dLP~~~~d~~~~~p~~~~~l~~~i~~aD~~ii~tPe-Yn~s~pg~LKn~ 89 (190)
T 3u7r_A 18 NHKLMKVLQKLAEGRLEFHLLHIGDLPHYNDDLWADAPESVLRLKDRIEHSDAVLAITPE-YNRSYPGMIKNA 89 (190)
T ss_dssp HHHHHHHHHHHHTTTEEEEECCGGGSCCCCGGGGGGCCHHHHHHHHHHHTSSEEEEECCC-BTTBCCHHHHHH
T ss_pred HHHHHHHHHHhccCCCEEEEEecccCCCCCCCcccCCCHHHHHHHHHHHhCCcEEEechh-hcccCCHHHHHH
Confidence 3344455555656789999999887633332 3466778888888777332 235554444433
No 108
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=43.06 E-value=36 Score=29.36 Aligned_cols=55 Identities=18% Similarity=0.260 Sum_probs=37.0
Q ss_pred CCcEEEEEechhH----HHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEE
Q 018167 238 GSDITLVGWGAQL----SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLI 295 (360)
Q Consensus 238 G~dv~Iia~G~~~----~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivv 295 (360)
|+.+++|.|++.. .....+.+.|++-|+++.++++.. -+.+.+.+.+++...|++
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~---~~~~~~~~~l~~ad~I~l 85 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIAT---ESLGEITTKLRKNDFIYV 85 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTT---SCHHHHHHHHHHSSEEEE
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecC---CChHHHHHHHHhCCEEEE
Confidence 6789999988752 233445556667799888887766 244555566777777654
No 109
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=42.80 E-value=1e+02 Score=31.43 Aligned_cols=93 Identities=15% Similarity=0.136 Sum_probs=56.6
Q ss_pred CCchHHHH-----HcCCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEEeccccccccCc--ccCCC-CCc----cc---CC
Q 018167 165 HSQSPEAF-----FCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV--EEVPE-DDY----ML---PL 229 (360)
Q Consensus 165 Hs~~d~a~-----~r~iPn~~V~~P~d~~e~~~~l~~a~~~~~P~~i~~~k~l~r~~~--~~v~~-~~~----~~---~~ 229 (360)
|+..|+-- ++.+|.. |+.|.+.+|+..++++|-+++-|++.+-. ..+. ..++. ++. .+ .+
T Consensus 189 ~s~~d~~~~~~g~~~~~P~a-VV~P~s~eeV~~iv~~A~~~~ipVvprGg----GTsl~GG~~~~~~~~~ggVvLDlsrM 263 (658)
T 4bby_A 189 HCLHEIFLLREGMFERIPDI-VLWPTCHDDVVKIVNLACKYNLCIIPIGG----GTSVSYGLMCPADETRTIISLDTSQM 263 (658)
T ss_dssp SCHHHHHHHHSSCCSCCCSE-EEECCSHHHHHHHHHHHHHTTCEEEEESS----CCCSSSTTCCCTTCCSCEEEEECTTC
T ss_pred CCHHHHHHHhCCcccCCcCE-EEeeCCHHHHHHHHHHHHHCCCeEEEECC----CcCCCCCCCCCCCCCCcEEEEECccC
Confidence 45666533 3468876 99999999999999999999999988421 1111 01111 000 01 12
Q ss_pred CceEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCC
Q 018167 230 SEAEVIREGSDITLVGWGAQLSIMEQACLDAEKEGI 265 (360)
Q Consensus 230 Gk~~vl~~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi 265 (360)
.+-.-+.+.+..+.|-.|.......+++ ++.|.
T Consensus 264 nrIleiD~~~~~atVeaGv~~~~L~~~L---~~~Gl 296 (658)
T 4bby_A 264 NRILWVDENNLTAHVEAGITGQELERQL---KESGY 296 (658)
T ss_dssp CCEEEEETTTTEEEEETTCBHHHHHHHH---HHHTE
T ss_pred CCcEEEcCCCCEEEEecCchHHHHHHHH---HHcCC
Confidence 2222234566677788888877766554 45553
No 110
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=42.32 E-value=70 Score=25.99 Aligned_cols=78 Identities=10% Similarity=0.019 Sum_probs=44.6
Q ss_pred Eecc-ccCCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCCCccccc-cccCC--C-
Q 018167 271 DLKT-LIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPFPLVF-EPFYM--P- 345 (360)
Q Consensus 271 ~~~~-ikP~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~~~~~~~-e~~gl--~- 345 (360)
++.. +-+++.+.+.+.+..++-++ . .+...|++..+.++++- ..|+... ......+.. ...|+ +
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~~l-~--ps~~e~~~~~~~Ea~a~------G~PvI~~--~~~~~~e~~~~~~g~~~~~ 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDFVI-I--PSYFEPFGLVALEAMCL------GAIPIAS--AVGGLRDIITNETGILVKA 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSEEE-E--CCSCCSSCHHHHHHHHT------TCEEEEE--SCHHHHHHCCTTTCEEECT
T ss_pred CEEEEeccCCHHHHHHHHHHCCEEE-E--CCCCCCccHHHHHHHHC------CCCEEEe--CCCChHHHcCCCceEEecC
Confidence 3445 66678788888887776443 3 23346778888888763 3454321 111112222 11222 1
Q ss_pred -CHHHHHHHHHHhhh
Q 018167 346 -TKNKILDAIKSTVN 359 (360)
Q Consensus 346 -~~~~I~~~i~~~l~ 359 (360)
|++.+.+++.++++
T Consensus 165 ~~~~~l~~~i~~l~~ 179 (200)
T 2bfw_A 165 GDPGELANAILKALE 179 (200)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh
Confidence 78899999888764
No 111
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=42.05 E-value=35 Score=28.82 Aligned_cols=69 Identities=19% Similarity=0.268 Sum_probs=43.3
Q ss_pred echhHHHHHHHHHHHHhcCCCeeEEEeccccCC-----------------cH-HHHHHHHhcCCeEEEEeCCCcCCchHH
Q 018167 246 WGAQLSIMEQACLDAEKEGISCELIDLKTLIPW-----------------DK-ETVEASVRKTGRLLISHEAPVTGGFGA 307 (360)
Q Consensus 246 ~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~-----------------d~-~~l~~~~~~~~~ivvvEe~~~~GGlgs 307 (360)
+|++-..|..+++.|++.|.+++++|+....|. |. +.+.+.+..++.||+.-- ...|++-.
T Consensus 17 ~g~T~~la~~i~~~l~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ii~gsP-~y~~~~~~ 95 (211)
T 1ydg_A 17 TGTGYAMAQEAAEAGRAAGAEVRLLKVRETAPQDVIDGQDAWKANIEAMKDVPEATPADLEWAEAIVFSSP-TRFGGATS 95 (211)
T ss_dssp SSHHHHHHHHHHHHHHHTTCEEEEEECCCCSCHHHHTTCHHHHHHHHHTTTSCBCCHHHHHHCSEEEEEEE-EETTEECH
T ss_pred CChHHHHHHHHHHHHhcCCCEEEEEeccccccchhhhcccccccccccccchhHHHHHHHHHCCEEEEEcC-ccccCccH
Confidence 456666777778888888999999999875110 10 123345556676666533 23567767
Q ss_pred HHHHHHHH
Q 018167 308 EISASILE 315 (360)
Q Consensus 308 ~v~~~l~~ 315 (360)
.+..++..
T Consensus 96 ~lk~~ld~ 103 (211)
T 1ydg_A 96 QMRAFIDT 103 (211)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 66666643
No 112
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=42.05 E-value=7.1 Score=31.12 Aligned_cols=39 Identities=15% Similarity=0.345 Sum_probs=29.0
Q ss_pred eeeCCcEEEEEechhHH--HHHHHHHHHHhcCCCeeEEEec
Q 018167 235 IREGSDITLVGWGAQLS--IMEQACLDAEKEGISCELIDLK 273 (360)
Q Consensus 235 l~~G~dv~Iia~G~~~~--~al~Aa~~L~~~Gi~v~Vi~~~ 273 (360)
+.++-|++||++|.... .--+..+.|++.||.+++.|-+
T Consensus 58 l~~~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~T~ 98 (122)
T 2ab1_A 58 VEKGVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQTE 98 (122)
T ss_dssp HTTCCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEECHH
T ss_pred hhCCCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEeCHH
Confidence 45668999999998654 2344566788899999888643
No 113
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=41.81 E-value=49 Score=27.43 Aligned_cols=30 Identities=20% Similarity=0.212 Sum_probs=22.1
Q ss_pred echhHHHHHHHHHHHHh-cCCCeeEEEeccc
Q 018167 246 WGAQLSIMEQACLDAEK-EGISCELIDLKTL 275 (360)
Q Consensus 246 ~G~~~~~al~Aa~~L~~-~Gi~v~Vi~~~~i 275 (360)
+|++-..|..+++.|++ .|++++++|+...
T Consensus 15 ~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~~ 45 (188)
T 2ark_A 15 TGNTKKMAELVAEGARSLEGTEVRLKHVDEA 45 (188)
T ss_dssp SSHHHHHHHHHHHHHHTSTTEEEEEEETTTC
T ss_pred CcHHHHHHHHHHHHHhhcCCCeEEEEEhhhC
Confidence 35555666677777887 8999999988764
No 114
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=41.53 E-value=69 Score=24.82 Aligned_cols=32 Identities=13% Similarity=0.051 Sum_probs=24.2
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEe
Q 018167 238 GSDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (360)
Q Consensus 238 G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~ 272 (360)
+..++|+++|..- ...++.|.++|.++.++|.
T Consensus 6 ~~~v~I~G~G~iG---~~la~~L~~~g~~V~~id~ 37 (141)
T 3llv_A 6 RYEYIVIGSEAAG---VGLVRELTAAGKKVLAVDK 37 (141)
T ss_dssp CCSEEEECCSHHH---HHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEECCCHHH---HHHHHHHHHCCCeEEEEEC
Confidence 4578999998743 3456778788999999875
No 115
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=41.39 E-value=1.3e+02 Score=23.69 Aligned_cols=109 Identities=13% Similarity=0.080 Sum_probs=63.0
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCc--HHHHHHHHhcC---CeEEEEeCCCcCCchHHHHHHHHH
Q 018167 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWD--KETVEASVRKT---GRLLISHEAPVTGGFGAEISASIL 314 (360)
Q Consensus 240 dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d--~~~l~~~~~~~---~~ivvvEe~~~~GGlgs~v~~~l~ 314 (360)
.++|++.|......+++++.+--+--++..+++..=...+ .+.+.+.+++. +.++++=| ..||-=..++..+.
T Consensus 3 ~iii~sHG~~A~gl~~~~~~i~G~~~~v~ai~~~~~~~~~~~~~~i~~~i~~~~~~~gvliLtD--l~GGSp~n~a~~~~ 80 (135)
T 1pdo_A 3 AIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAETLIEKYNAQLAKLDTTKGVLFLVD--TWGGSPFNAASRIV 80 (135)
T ss_dssp EEEEECSBTHHHHHHHHHHHHHCCCSSEEEECBCTTCCHHHHHHHHHHHHTTSCCTTCEEEEES--STTSHHHHHHHHHH
T ss_pred eEEEEeChHHHHHHHHHHHHHcCCcCCEEEEEeeCCCCHHHHHHHHHHHHHhcCCCCCEEEEEE--CCCCCHHHHHHHHH
Confidence 4789999998888888888875333467777776433322 23456666653 35666655 34654334444443
Q ss_pred HhccccCCCceEEEecCCCCc--cccc-cccCCCCHHHHHHHHHH
Q 018167 315 ERCFLRLEAPVARVCGLDTPF--PLVF-EPFYMPTKNKILDAIKS 356 (360)
Q Consensus 315 ~~~~~~l~~~~~~i~~~~~~~--~~~~-e~~gl~~~~~I~~~i~~ 356 (360)
.. ..++.-+.|.+-|- .... ...+. +.+.+++.+.+
T Consensus 81 ~~-----~~~v~vi~GvNlpmlle~~~~~~~~~-~l~el~~~~~~ 119 (135)
T 1pdo_A 81 VD-----KEHYEVIAGVNIPMLVETLMARDDDP-SFDELVALAVE 119 (135)
T ss_dssp TT-----CTTEEEEESCCHHHHHHHHHHHTTCC-CHHHHHHHHHH
T ss_pred hc-----cCCEEEEeCCCHHHHHHHHHhcccCC-CHHHHHHHHHH
Confidence 32 23677777777651 1111 11255 67777766654
No 116
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=41.38 E-value=44 Score=34.63 Aligned_cols=87 Identities=11% Similarity=0.093 Sum_probs=50.1
Q ss_pred eeEEEecCcc--cH-HHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCC--CchHH-HHHcCCCCcEEEee
Q 018167 111 RAIAEIQFAD--YI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH--SQSPE-AFFCHVPGLKVVIP 184 (360)
Q Consensus 111 ~p~~~~~f~~--F~-~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~H--s~~d~-a~~r~iPn~~V~~P 184 (360)
+.++++ ..+ |. ..+++.+. .++..++ |. .+++....+.. -++.++ ..+|+ ..+++. |+.++.|
T Consensus 188 ~~vv~i-~GDG~l~eG~~~Eal~-~A~~~~L------~~-livI~dnN~~~-i~~~~~~~~~~d~~~~~~a~-G~~~~~~ 256 (711)
T 3uk1_A 188 HHTYVF-LGDGCLMEGISHEACS-LAGTLKL------NK-LIALYDDNGIS-IDGDVVNWFHDDTPKRFEAY-GWNVIPN 256 (711)
T ss_dssp CCEEEE-ECHHHHHSHHHHHHHH-HHHHTTC------TT-EEEEEEECSEE-TTEEGGGTCCCCHHHHHHHT-TCEEEEE
T ss_pred CeEEEE-ECCcchhhccHHHHHH-HHHHhCC------Cc-EEEEEECCCcc-cccchhhhcCCCHHHHHHHc-CCcEEEE
Confidence 344453 455 32 24566655 4666553 43 34445544322 222222 12343 455655 7777765
Q ss_pred ---CCHHHHHHHHHHhHhCCCCEEEec
Q 018167 185 ---RSPRQAKGLLLSCIRDPNPVVFFE 208 (360)
Q Consensus 185 ---~d~~e~~~~l~~a~~~~~P~~i~~ 208 (360)
.|..++..+++.|.+.++|++|..
T Consensus 257 vdG~d~~~l~~Al~~A~~~~~P~lI~v 283 (711)
T 3uk1_A 257 VNGHDVDAIDAAIAKAKRSDKPSLICC 283 (711)
T ss_dssp EETTCHHHHHHHHHHHTTCSSCEEEEE
T ss_pred eCCCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 488999999999888899999953
No 117
>2e85_A Hydrogenase 3 maturation protease; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2i8l_A
Probab=40.50 E-value=71 Score=26.23 Aligned_cols=57 Identities=16% Similarity=0.043 Sum_probs=36.6
Q ss_pred cEEEEEechhHH----HHHHHHHHHHhcC-CCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeC
Q 018167 240 DITLVGWGAQLS----IMEQACLDAEKEG-ISCELIDLKTLIPWDKETVEASVRKTGRLLISHE 298 (360)
Q Consensus 240 dv~Iia~G~~~~----~al~Aa~~L~~~G-i~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe 298 (360)
+++|+++|+... .-..++++|+++. -+++++|.-+.-+--...+.+. +.+++|+|+-
T Consensus 5 ~~lVlGiGN~l~gDDG~G~~v~~~L~~~~~~~v~vid~gt~~~~l~~~l~~~--~~d~lIiVDA 66 (159)
T 2e85_A 5 TDVLLCVGNSMMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPENDIVAIREL--RPTRLLIVDA 66 (159)
T ss_dssp CEEEEEECCGGGGGGGHHHHHHHHHHHSCCTTCEEEECTTCSGGGHHHHHHH--CCSEEEEEEE
T ss_pred CEEEEEECCcccccccHHHHHHHHHhhhCCCCeEEEECCCCHHHHHHHHhcC--CCCEEEEEEe
Confidence 368999998752 4667778887653 2588999998644222222221 4578888874
No 118
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=39.82 E-value=19 Score=33.55 Aligned_cols=51 Identities=16% Similarity=0.090 Sum_probs=33.4
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCCeeEEEecc------------ccCCcHHHHHHHHhcCCeEE
Q 018167 241 ITLVGWGAQLSIMEQACLDAEKEGISCELIDLKT------------LIPWDKETVEASVRKTGRLL 294 (360)
Q Consensus 241 v~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~------------ikP~d~~~l~~~~~~~~~iv 294 (360)
+.|++.|.. +.+.++.+++.|+++-++|... +.+.|.+.+.+.+.+.+.|+
T Consensus 2 iliiG~g~~---g~~~~~a~~~~G~~v~~~~~~~~~~~~~~a~~~~~~~~d~~~l~~~~~~~d~v~ 64 (369)
T 3aw8_A 2 IGILGGGQL---GRMLALAGYPLGLSFRFLDPSPEACAGQVGELVVGEFLDEGALLRFAEGLALVT 64 (369)
T ss_dssp EEEECCSHH---HHHHHHHHTTBTCCEEEEESCTTCGGGGTSEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred EEEECCCHH---HHHHHHHHHHcCCEEEEEeCCCCChHHHhhceEecCCCCHHHHHHHHhCCCEEE
Confidence 677777753 3444555778899998888642 23457778888775555444
No 119
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=39.58 E-value=2.1e+02 Score=26.85 Aligned_cols=37 Identities=16% Similarity=0.280 Sum_probs=27.3
Q ss_pred HHHHHcCCCCcEEEeeCCHHHHHHHHHHhHh----CCCCEEE
Q 018167 169 PEAFFCHVPGLKVVIPRSPRQAKGLLLSCIR----DPNPVVF 206 (360)
Q Consensus 169 d~a~~r~iPn~~V~~P~d~~e~~~~l~~a~~----~~~P~~i 206 (360)
+.+-.-.+|++.| .-.|+.++..+++.|++ .++|++|
T Consensus 221 ~~a~a~G~~~~~V-dG~D~~av~~a~~~A~~~~r~~~gP~lI 261 (368)
T 1w85_A 221 QKAVAAGIPGIQV-DGMDPLAVYAAVKAARERAINGEGPTLI 261 (368)
T ss_dssp GGGGGTTCCEEEE-ETTCHHHHHHHHHHHHHHHHTTSCCEEE
T ss_pred HHHHHCCCCEEEE-cCCCHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 3343346777654 44589999999999986 5899998
No 120
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=39.43 E-value=59 Score=25.57 Aligned_cols=48 Identities=17% Similarity=0.136 Sum_probs=36.8
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcC
Q 018167 241 ITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKT 290 (360)
Q Consensus 241 v~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~ 290 (360)
++|.+ -+.-..|.+|.+.|++.|++.+++|+.. .|.+.+.+.+.+++.
T Consensus 3 i~lY~-~~~C~~C~ka~~~L~~~gi~y~~~di~~-~~~~~~el~~~l~~~ 50 (132)
T 1z3e_A 3 VTLYT-SPSCTSCRKARAWLEEHEIPFVERNIFS-EPLSIDEIKQILRMT 50 (132)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHHTTCCEEEEETTT-SCCCHHHHHHHHHTC
T ss_pred EEEEe-CCCChHHHHHHHHHHHcCCceEEEEccC-CCccHHHHHHHHHHc
Confidence 44443 3445788899999999999999999976 778888888877644
No 121
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=38.99 E-value=1e+02 Score=25.34 Aligned_cols=68 Identities=7% Similarity=-0.019 Sum_probs=44.2
Q ss_pred chhHHHHHHHHHHHHhcC--CCeeEEEeccc--cCCc------------------------HHHHHHHHhcCCeEEEEeC
Q 018167 247 GAQLSIMEQACLDAEKEG--ISCELIDLKTL--IPWD------------------------KETVEASVRKTGRLLISHE 298 (360)
Q Consensus 247 G~~~~~al~Aa~~L~~~G--i~v~Vi~~~~i--kP~d------------------------~~~l~~~~~~~~~ivvvEe 298 (360)
|.+-..+..+++.|++.| .+++++|+... .+++ .+.+.+.+..+..||++=-
T Consensus 16 s~t~~la~~~~~~l~~~g~~~~v~~~dl~~~~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~aD~iv~~~P 95 (201)
T 1t5b_A 16 SQSGQLTDYFIEQWREKHVADEITVRDLAANPVPVLDGELVGAMRPGDAPLTPRQQDALALSDELIAELKAHDVIVIAAP 95 (201)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCEEEEEETTTSCCCCCCHHHHHHTC--CCCCCHHHHHHHHHHHHHHHHHHHCSEEEEECC
T ss_pred ChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCCCCCCHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHhCCEEEEEeC
Confidence 444455556677787766 89999999763 2232 1235566777887777643
Q ss_pred CCcCCchHHHHHHHHHH
Q 018167 299 APVTGGFGAEISASILE 315 (360)
Q Consensus 299 ~~~~GGlgs~v~~~l~~ 315 (360)
...+++-+.+..++-.
T Consensus 96 -~y~~~~p~~lK~~iD~ 111 (201)
T 1t5b_A 96 -MYNFNIPTQLKNYFDL 111 (201)
T ss_dssp -CBTTBCCHHHHHHHHH
T ss_pred -cccCcCCHHHHHHHHH
Confidence 3467888877777654
No 122
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=38.89 E-value=68 Score=31.84 Aligned_cols=100 Identities=9% Similarity=-0.059 Sum_probs=52.9
Q ss_pred HHHHHHHHHhcCC-CeeEEEecCcc--cHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCC------CCCC---CC
Q 018167 97 GIVGFAIGLAAMG-NRAIAEIQFAD--YIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV------GHGG---HY 164 (360)
Q Consensus 97 ~~vg~AaGlA~~G-~~p~~~~~f~~--F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~------g~~g---~~ 164 (360)
..++.|.|+|+.. -++++++ ..+ |.+ .+..+-. ++..+ +|+ .+|+...+++. +.+. ..
T Consensus 429 ~~l~~A~Gaala~~~~~vv~~-~GDG~~~~-~~~eL~t-a~~~~------l~~-~ivv~nN~~~~~~~~~~~~~~~~~~~ 498 (570)
T 2vbf_A 429 YTFPAALGSQIADKESRHLLF-IGDGSLQL-TVQELGL-SIREK------LNP-ICFIINNDGYTVEREIHGPTQSYNDI 498 (570)
T ss_dssp THHHHHHHHHHHCTTSEEEEE-EEHHHHHH-HGGGHHH-HHHTT------CCC-EEEEEESSSCHHHHHHSCTTCGGGCC
T ss_pred hhHHHHHHHHHhCCCCcEEEE-Ecchhhhc-CHHHHHH-HHHcC------CCC-EEEEEECCchHHHHHHhccCCCccCC
Confidence 4567778877753 3556664 454 333 3333332 44444 466 56666554431 1111 01
Q ss_pred CC--chHHHHHcCCCC--cEEEeeCCHHHHHHHHHH-hHhCCCCEEE
Q 018167 165 HS--QSPEAFFCHVPG--LKVVIPRSPRQAKGLLLS-CIRDPNPVVF 206 (360)
Q Consensus 165 Hs--~~d~a~~r~iPn--~~V~~P~d~~e~~~~l~~-a~~~~~P~~i 206 (360)
+. ...++-.-.+++ ...+...+..|+..+++. +.+.++|++|
T Consensus 499 ~~~d~~~~a~a~G~~~~~~~~~~v~~~~el~~al~~a~~~~~~p~li 545 (570)
T 2vbf_A 499 PMWNYSKLPETFGATEDRVVSKIVRTENEFVSVMKEAQADVNRMYWI 545 (570)
T ss_dssp CCCCGGGHHHHTTCCTTTEEEEEECBHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCHHHHHHHcCCCcCCcceEEecCHHHHHHHHHHHHhcCCCcEEE
Confidence 11 222222223331 115566899999999998 4667899988
No 123
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=38.15 E-value=58 Score=32.53 Aligned_cols=111 Identities=9% Similarity=0.071 Sum_probs=62.6
Q ss_pred CCcEEechh--HHHHHHHHHHHHhcCC-CeeEEEecCcc--cHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCC-
Q 018167 85 KSRVFNTPL--CEQGIVGFAIGLAAMG-NRAIAEIQFAD--YIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV- 158 (360)
Q Consensus 85 p~r~i~~GI--aE~~~vg~AaGlA~~G-~~p~~~~~f~~--F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~- 158 (360)
|.+|++.|- +=-..++.|.|+|+.. -++++++ ..+ |.+ .+..+- .++..+ +|+ .+|+...+++.
T Consensus 416 ~~~~~~~g~~G~~G~~l~~AiGaala~~~~~vv~i-~GDGs~~~-~~~~L~-ta~~~~------l~~-~ivv~NN~~~~~ 485 (590)
T 1ybh_A 416 PRQWLSSGGLGAMGFGLPAAIGASVANPDAIVVDI-DGDGSFIM-NVQELA-TIRVEN------LPV-KVLLLNNQHLGM 485 (590)
T ss_dssp TTSEECCCSSCCTTCHHHHHHHHHHHCTTSCEEEE-EEHHHHHH-TTTHHH-HHHHTT------CCE-EEEEEECSBCHH
T ss_pred CCeEEeCCCcccccchHHHHHHHHHhCCCCcEEEE-Eccchhhc-cHHHHH-HHHHhC------CCc-EEEEEECCcchH
Confidence 688998752 2223677888888763 3566664 444 332 233333 244434 466 55555554421
Q ss_pred ---------CCC--CC---C-C----CchHH-HHHcCCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 018167 159 ---------GHG--GH---Y-H----SQSPE-AFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (360)
Q Consensus 159 ---------g~~--g~---~-H----s~~d~-a~~r~iPn~~V~~P~d~~e~~~~l~~a~~~~~P~~i 206 (360)
+.. ++ + | ...|+ .+.++. |+..+...++.|+..+++.+++.++|++|
T Consensus 486 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~li 552 (590)
T 1ybh_A 486 VMQWEDRFYKANRAHTFLGDPAQEDEIFPNMLLFAAAC-GIPAARVTKKADLREAIQTMLDTPGPYLL 552 (590)
T ss_dssp HHHHHHHHSTTCCCSCBCSCGGGTTSCSSCHHHHHHHT-TCCEEEECBHHHHHHHHHHHHHSSSCEEE
T ss_pred HHHHHHHhcCCccccccccccccccCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEE
Confidence 000 00 0 0 01233 233332 44455668999999999999999999988
No 124
>1cfz_A Hydrogenase 2 maturation protease; metzincins, nickel; 2.20A {Escherichia coli} SCOP: c.56.1.1 PDB: 2kml_A
Probab=37.05 E-value=62 Score=26.63 Aligned_cols=55 Identities=20% Similarity=0.183 Sum_probs=39.0
Q ss_pred cEEEEEechhH----HHHHHHHHHHHhc-C--CCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeC
Q 018167 240 DITLVGWGAQL----SIMEQACLDAEKE-G--ISCELIDLKTLIPWDKETVEASVRKTGRLLISHE 298 (360)
Q Consensus 240 dv~Iia~G~~~----~~al~Aa~~L~~~-G--i~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe 298 (360)
+++|+++|+.. ..-..++++|+++ . -+++++|.-+.-+ + +...+..++++|+|+-
T Consensus 2 ~ilVlGiGN~l~gDDG~G~~v~~~L~~~~~~p~~v~vid~gt~~~-~---l~~~l~~~d~lIiVDA 63 (162)
T 1cfz_A 2 RILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTAGM-E---LLGDMANRDHLIIADA 63 (162)
T ss_dssp CEEEEEESCTTBGGGGHHHHHHHHHHHHEECCTTEEEEEEETCCG-G---GHHHHSSCSEEEEEEE
T ss_pred CEEEEEECCcccccccHHHHHHHHHHhhCCCCCCeEEEECCCCHH-H---HHHHHhCCCEEEEEEe
Confidence 47899999864 3466778888764 3 3689999999543 2 2355667888988875
No 125
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=36.96 E-value=70 Score=24.78 Aligned_cols=66 Identities=12% Similarity=0.082 Sum_probs=44.4
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhcCCC-eeEEEeccccCCcHHH---HHHHH-hcCCeEEEEeCCCcCCchHHH
Q 018167 238 GSDITLVGWG----AQLSIMEQACLDAEKEGIS-CELIDLKTLIPWDKET---VEASV-RKTGRLLISHEAPVTGGFGAE 308 (360)
Q Consensus 238 G~dv~Iia~G----~~~~~al~Aa~~L~~~Gi~-v~Vi~~~~ikP~d~~~---l~~~~-~~~~~ivvvEe~~~~GGlgs~ 308 (360)
..+|+|.+.+ +.-..|.+|.+.|++.|+. .+.+|+.. |.+. +.+.. ..+-..|++.. ...||+...
T Consensus 19 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~vdV~~----d~~~~~~l~~~tg~~tvP~vfI~g-~~IGG~d~l 93 (118)
T 2wem_A 19 KDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLD----DPELRQGIKDYSNWPTIPQVYLNG-EFVGGCDIL 93 (118)
T ss_dssp HSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCCEEEESSS----CHHHHHHHHHHHTCCSSCEEEETT-EEEESHHHH
T ss_pred cCCEEEEEecCCCCCccHHHHHHHHHHHHcCCCCCEEEEcCC----CHHHHHHHHHHhCCCCcCeEEECC-EEEeChHHH
Confidence 4679999988 3567899999999999994 99999864 3332 22221 12334566654 457987653
No 126
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=36.25 E-value=36 Score=27.46 Aligned_cols=48 Identities=10% Similarity=0.027 Sum_probs=36.6
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcC
Q 018167 241 ITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKT 290 (360)
Q Consensus 241 v~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~ 290 (360)
++|.+. +.-..|.+|.+.|++.|++.+++|+.. .|.+.+.|.+.+.+.
T Consensus 4 itiY~~-p~C~~crkak~~L~~~gi~~~~idi~~-~~~~~~eL~~~~~~~ 51 (141)
T 1s3c_A 4 ITIYHN-PASGTSRNTLEMIRNSGTEPTIILYLE-NPPSRDELVKLIADM 51 (141)
T ss_dssp CEEECC-TTCHHHHHHHHHHHHTTCCCEEECTTT-SCCCHHHHHHHHHHH
T ss_pred EEEEEC-CCChHHHHHHHHHHHcCCCEEEEECCC-CCccHHHHHHHhccc
Confidence 444433 345778899999999999999999976 788888777766654
No 127
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=36.20 E-value=1e+02 Score=31.51 Aligned_cols=75 Identities=9% Similarity=0.099 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCC-C-chHH-HHHcCCCCcEEE-ee---CCHHHHHHHHHH
Q 018167 124 PAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-S-QSPE-AFFCHVPGLKVV-IP---RSPRQAKGLLLS 196 (360)
Q Consensus 124 ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~H-s-~~d~-a~~r~iPn~~V~-~P---~d~~e~~~~l~~ 196 (360)
.+++-+. .++..++ +. .+++.+..+.. -++++. . .+|+ ..+++. |+.++ .- .|..++..+++.
T Consensus 164 ~~~Eal~-~A~~~~L------~~-li~i~d~N~~~-i~~~~~~~~~~d~~~~~~a~-G~~~~~~vdG~~d~~~l~~Al~~ 233 (673)
T 1r9j_A 164 VCQEALS-LAGHLAL------EK-LIVIYDSNYIS-IDGSTSLSFTEQCHQKYVAM-GFHVIEVKNGDTDYEGLRKALAE 233 (673)
T ss_dssp HHHHHHH-HHHHHTC------TT-EEEEEEECSBC-SSSBGGGTCCCCHHHHHHHT-TCEEEEESCTTTCHHHHHHHHHH
T ss_pred HHHHHHH-HHHHhCC------Cc-EEEEEECCCCc-cccchhhccCHhHHHHHHHC-CCeEEEEeCCCCCHHHHHHHHHH
Confidence 4566655 4666553 32 24444444432 223322 1 3444 455664 88888 43 688999999999
Q ss_pred hHh-CCCCEEEec
Q 018167 197 CIR-DPNPVVFFE 208 (360)
Q Consensus 197 a~~-~~~P~~i~~ 208 (360)
|.+ .++|++|..
T Consensus 234 A~~~~~~P~lI~~ 246 (673)
T 1r9j_A 234 AKATKGKPKMIVQ 246 (673)
T ss_dssp HHHCCSSCEEEEE
T ss_pred HHHcCCCCEEEEE
Confidence 887 689998853
No 128
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans}
Probab=35.84 E-value=1.2e+02 Score=27.98 Aligned_cols=70 Identities=9% Similarity=0.080 Sum_probs=47.2
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccc----hhHHHHhCCC---cEEec---hhHHHHHHHHHHHHhcCC
Q 018167 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCT----TGLADRFGKS---RVFNT---PLCEQGIVGFAIGLAAMG 109 (360)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~----~~~~~~~gp~---r~i~~---GIaE~~~vg~AaGlA~~G 109 (360)
...-..|.+++.++.++..+|++++=--+.+|.|... +.+.++| |+ ++||+ ...+..+|--|+=|+..|
T Consensus 98 qPs~~~~~~~f~~l~~~g~~Ii~I~iSS~LSGTy~sA~~Aa~~~~e~~-~~~~I~ViDS~~~s~g~g~lv~~Aa~l~~~G 176 (320)
T 3pl5_A 98 QVNVGQFESYFRQSAENGQEVLYIAFSSVLSGTYQSAVMARDIVLEEY-PQASIEIVDTLAATGGEGYLAMLAAQAREEG 176 (320)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEECCTTTCTHHHHHHHHHHHHHHHC-TTCCEEEEECCCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEEecCchHhHHHHHHHHHHHHHHhhC-CCCeEEEEcCCchHHHHHHHHHHHHHHHhcC
Confidence 3446778888888888888898887443422434322 2345578 76 67775 677777888888888888
Q ss_pred C
Q 018167 110 N 110 (360)
Q Consensus 110 ~ 110 (360)
.
T Consensus 177 ~ 177 (320)
T 3pl5_A 177 K 177 (320)
T ss_dssp C
T ss_pred C
Confidence 5
No 129
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=35.40 E-value=32 Score=34.22 Aligned_cols=110 Identities=11% Similarity=0.062 Sum_probs=58.9
Q ss_pred CCcEEechh--HHHHHHHHHHHHhcCC-CeeEEEecCcc--cHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCC
Q 018167 85 KSRVFNTPL--CEQGIVGFAIGLAAMG-NRAIAEIQFAD--YIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVG 159 (360)
Q Consensus 85 p~r~i~~GI--aE~~~vg~AaGlA~~G-~~p~~~~~f~~--F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g 159 (360)
|.+|+..+- +=-..++.|.|+|+.- -++++++ ..+ |.+ .+..+- .++..+ +|+ .+|+...+++.-
T Consensus 399 ~~~~~~~~~~g~mG~~l~~A~G~ala~~~~~vv~~-~GDG~~~~-~~~eL~-ta~~~~------l~~-~ivv~nN~~~~~ 468 (566)
T 2vbi_A 399 GARVELEMQWGHIGWSVPSAFGNAMGSQDRQHVVM-VGDGSFQL-TAQEVA-QMVRYE------LPV-IIFLINNRGYVI 468 (566)
T ss_dssp TCEEECCTTTCCTTTHHHHHHHHHHTCTTSEEEEE-EEHHHHHH-HGGGHH-HHHHTT------CCC-EEEEEECSSCHH
T ss_pred CCEEEecCcccchhhHHHHHHHHHHhCCCCcEEEE-EcchHHHh-hHHHHH-HHHHhC------CCc-EEEEEECCcceE
Confidence 456774220 1124567888888763 3556664 454 332 333333 244433 466 566565544321
Q ss_pred CCC-------CCCCchHH-HHHcCCCCc-----EEEeeCCHHHHHHHHHHhHhC-CCCEEE
Q 018167 160 HGG-------HYHSQSPE-AFFCHVPGL-----KVVIPRSPRQAKGLLLSCIRD-PNPVVF 206 (360)
Q Consensus 160 ~~g-------~~Hs~~d~-a~~r~iPn~-----~V~~P~d~~e~~~~l~~a~~~-~~P~~i 206 (360)
... ..+. .|+ .+.++. |+ ..+...++.|+..+++.+.+. ++|++|
T Consensus 469 ~~~~~~~~~~~~~~-~d~~~~a~a~-G~~~~~~~~~~v~~~~el~~al~~a~~~~~gp~li 527 (566)
T 2vbi_A 469 EIAIHDGPYNYIKN-WDYAGLMEVF-NAGEGHGLGLKATTPKELTEAIARAKANTRGPTLI 527 (566)
T ss_dssp HHTTSCCGGGCCCC-CCTTTHHHHH-HTTTCCCEEEEECSHHHHHHHHHHHHHCCSSCEEE
T ss_pred EEeeccCCccCCCC-CCHHHHHHHc-CCCCCCccEEEeCCHHHHHHHHHHHHhcCCCcEEE
Confidence 100 1111 121 111111 33 666778999999999999987 899998
No 130
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=34.97 E-value=63 Score=30.10 Aligned_cols=63 Identities=11% Similarity=0.190 Sum_probs=40.3
Q ss_pred chhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHH
Q 018167 247 GAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASI 313 (360)
Q Consensus 247 G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l 313 (360)
|++-..|..+++.|.+.|++++++|+.. .+.+.+.+.+..++.||+.-- ...|++-..+..++
T Consensus 268 gnT~~la~~i~~~l~~~g~~v~~~~~~~---~~~~~~~~~l~~~d~iiigsP-~y~~~~~~~~k~~l 330 (404)
T 2ohh_A 268 GSTRKMAHAIAEGAMSEGVDVRVYCLHE---DDRSEIVKDILESGAIALGAP-TIYDEPYPSVGDLL 330 (404)
T ss_dssp SHHHHHHHHHHHHHHTTTCEEEEEETTT---SCHHHHHHHHHTCSEEEEECC-EETTEECTHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCeEEEEECCC---CCHHHHHHHHHHCCEEEEECc-cccccchHHHHHHH
Confidence 3445666667777777899998888764 455666667777887776632 23455544455444
No 131
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=34.53 E-value=28 Score=31.84 Aligned_cols=30 Identities=30% Similarity=0.339 Sum_probs=23.9
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCCeeEEEe
Q 018167 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (360)
Q Consensus 240 dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~ 272 (360)
||+||+-|..- +.+|..|.+.|++|.|++-
T Consensus 6 DViIVGaGpaG---l~~A~~La~~G~~V~v~Er 35 (397)
T 3oz2_A 6 DVLVVGGGPGG---STAARYAAKYGLKTLMIEK 35 (397)
T ss_dssp EEEEECCSHHH---HHHHHHHHHTTCCEEEECS
T ss_pred CEEEECcCHHH---HHHHHHHHHCCCcEEEEeC
Confidence 89999999742 3356678888999999985
No 132
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=34.40 E-value=65 Score=27.33 Aligned_cols=61 Identities=15% Similarity=0.136 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHhcCCCee-EEEeccccCCc-----------HHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHH
Q 018167 251 SIMEQACLDAEKEGISCE-LIDLKTLIPWD-----------KETVEASVRKTGRLLISHEAPVTGGFGAEISASI 313 (360)
Q Consensus 251 ~~al~Aa~~L~~~Gi~v~-Vi~~~~ikP~d-----------~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l 313 (360)
..+..+++.+ ++|.+++ ++|+..+-.++ .+.+.+.++..+.+|++--- ..+++-..+..++
T Consensus 24 ~la~~~~~~~-~~g~~v~~~idL~~lP~~~~~~~~~~~~~~~~~~~~~i~~AD~iVi~tP~-Y~~s~p~~LK~~i 96 (199)
T 4hs4_A 24 AVARALPEIA-PEGIAITPLGSIGTFPHYSQDVQEEGFPAPVLTMAQQIATADAVVIVTPE-YNYSVPGVLKNAI 96 (199)
T ss_dssp HHHHHHHHHC-CTTEEEEECCCGGGSCCCCHHHHHHCCCHHHHHHHHHHHHSSEEEEEECC-BTTBCCHHHHHHH
T ss_pred HHHHHHHHHc-cCCCEEEEEEehhhcCCCCccccccCCCHHHHHHHHHHHhCCEEEEEcCc-cCCCcCHHHHHHH
Confidence 3344444445 3588899 99997763232 23466777788887776443 3566666555554
No 133
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=34.27 E-value=92 Score=29.44 Aligned_cols=108 Identities=14% Similarity=0.105 Sum_probs=58.7
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCCee-EEEeccccCCcHHHHHHHHhc-CCeEEEEeCCCcCCchH--HHHHHH
Q 018167 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCE-LIDLKTLIPWDKETVEASVRK-TGRLLISHEAPVTGGFG--AEISAS 312 (360)
Q Consensus 237 ~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~-Vi~~~~ikP~d~~~l~~~~~~-~~~ivvvEe~~~~GGlg--s~v~~~ 312 (360)
.|.|++=++.-. .++.+|...++++ +++- |.|.+ ||....++.++. ..+ +-+-.++ .|.-. .+|.+.
T Consensus 58 aG~diVRvavp~--~~~a~al~~I~~~-~~vPlvaDiH----f~~~lal~a~e~G~dk-lRINPGN-ig~~~~~~~vv~~ 128 (366)
T 3noy_A 58 AGCEIVRVAVPH--KEDVEALEEIVKK-SPMPVIADIH----FAPSYAFLSMEKGVHG-IRINPGN-IGKEEIVREIVEE 128 (366)
T ss_dssp TTCCEEEEECCS--HHHHHHHHHHHHH-CSSCEEEECC----SCHHHHHHHHHTTCSE-EEECHHH-HSCHHHHHHHHHH
T ss_pred cCCCEEEeCCCC--hHHHHHHHHHHhc-CCCCEEEeCC----CCHHHHHHHHHhCCCe-EEECCcc-cCchhHHHHHHHH
Confidence 477777666654 2333455555444 2322 23333 466666566654 444 4454333 22210 234444
Q ss_pred HHHhccccCCCceEEEecCCCCc-cccccccCCCCHHHHHHHHHHhhh
Q 018167 313 ILERCFLRLEAPVARVCGLDTPF-PLVFEPFYMPTKNKILDAIKSTVN 359 (360)
Q Consensus 313 l~~~~~~~l~~~~~~i~~~~~~~-~~~~e~~gl~~~~~I~~~i~~~l~ 359 (360)
..+++ .| .|||...+.. ..++++|+-|+++.+++.+.+.++
T Consensus 129 ak~~~-----~p-iRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~ 170 (366)
T 3noy_A 129 AKRRG-----VA-VRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSE 170 (366)
T ss_dssp HHHHT-----CE-EEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHcC-----CC-EEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 44443 33 4775444443 356889998899999998877543
No 134
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=34.08 E-value=87 Score=22.54 Aligned_cols=53 Identities=9% Similarity=0.107 Sum_probs=33.0
Q ss_pred HHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHh---cCCeEEEEeCCCcCCchHHH
Q 018167 254 EQACLDAEKEGISCELIDLKTLIPWDKETVEASVR---KTGRLLISHEAPVTGGFGAE 308 (360)
Q Consensus 254 l~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~---~~~~ivvvEe~~~~GGlgs~ 308 (360)
.+|.+.|++.|++.+.+|+.. .|-..+.+.+... .+-..|++.+. ..||+-..
T Consensus 22 ~~ak~~L~~~~i~~~~~di~~-~~~~~~~l~~~~g~~~~~vP~ifi~g~-~igG~d~l 77 (93)
T 1t1v_A 22 SEVTRILDGKRIQYQLVDISQ-DNALRDEMRTLAGNPKATPPQIVNGNH-YCGDYELF 77 (93)
T ss_dssp HHHHHHHHHTTCCCEEEETTS-CHHHHHHHHHHTTCTTCCSCEEEETTE-EEEEHHHH
T ss_pred HHHHHHHHHCCCceEEEECCC-CHHHHHHHHHHhCCCCCCCCEEEECCE-EEeCHHHH
Confidence 778888999999999999975 2222233433332 13345667554 57887553
No 135
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=33.94 E-value=46 Score=33.10 Aligned_cols=98 Identities=10% Similarity=0.125 Sum_probs=54.5
Q ss_pred HHHHHHHHHhcCC-CeeEEEecCcc--cHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCC----C---CCCCC
Q 018167 97 GIVGFAIGLAAMG-NRAIAEIQFAD--YIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGH----G---GHYHS 166 (360)
Q Consensus 97 ~~vg~AaGlA~~G-~~p~~~~~f~~--F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~----~---g~~Hs 166 (360)
..++.|.|+|+.- -++++.+ ..+ |.+ .+..+- .+...+ +|+ .+|+...+++.-. . +..+.
T Consensus 417 ~~l~~A~G~ala~~~~~vv~i-~GDGs~~~-~~~el~-ta~~~~------l~~-~ivv~NN~~~~~~~~~~~~~~~~~~~ 486 (568)
T 2wvg_A 417 WSVPAAFGYAVGAPERRNILM-VGDGSFQL-TAQEVA-QMVRLK------LPV-IIFLINNYGYTIEVMIHDGPYNNIKN 486 (568)
T ss_dssp THHHHHHHHHHHCTTSEEEEE-EEHHHHHH-HGGGHH-HHHHTT------CCC-EEEEEECSSCHHHHTTSCCGGGCCCC
T ss_pred hHHHHHHHHHHhCCCCcEEEE-EcChhHhc-cHHHHH-HHHHcC------CCc-EEEEEECCcceEeeeeccCCCcCCCC
Confidence 4567778877752 3556664 455 333 344443 244433 466 5565555443210 1 01111
Q ss_pred chHH-HHHcCCCCc---------EEEeeCCHHHHHHHHHHhHhC-CCCEEE
Q 018167 167 QSPE-AFFCHVPGL---------KVVIPRSPRQAKGLLLSCIRD-PNPVVF 206 (360)
Q Consensus 167 ~~d~-a~~r~iPn~---------~V~~P~d~~e~~~~l~~a~~~-~~P~~i 206 (360)
.|+ .+.++. |+ ..+...+.+|+..+++.+++. ++|++|
T Consensus 487 -~d~~~~a~a~-G~~~~~~~~~~~~~~v~~~~el~~al~~a~~~~~gp~li 535 (568)
T 2wvg_A 487 -WDYAGLMEVF-NGNGGYDSGAGKGLKAKTGGELAEAIKVALANTDGPTLI 535 (568)
T ss_dssp -CCHHHHHHHH-HCTTSSSCCCCEEEEESBHHHHHHHHHHHHHCCSSCEEE
T ss_pred -CCHHHHHHHh-CCCcccccCCcceEEeCCHHHHHHHHHHHHhcCCCcEEE
Confidence 122 222221 33 566678999999999999987 899988
No 136
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=33.93 E-value=52 Score=26.80 Aligned_cols=30 Identities=13% Similarity=0.125 Sum_probs=20.1
Q ss_pred chhHHHHHHHHHHHHhcCCCeeEEEecccc
Q 018167 247 GAQLSIMEQACLDAEKEGISCELIDLKTLI 276 (360)
Q Consensus 247 G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ik 276 (360)
|++-..|...++.|.+.|++++++++....
T Consensus 21 GnT~~~A~~ia~~l~~~g~~v~~~~~~~~~ 50 (167)
T 1ykg_A 21 GNARRVAEALRDDLLAAKLNVKLVNAGDYK 50 (167)
T ss_dssp SHHHHHHHHHHHHHHHHTCCCEEEEGGGCC
T ss_pred hHHHHHHHHHHHHHHHCCCceEEeehhhCC
Confidence 444455555566666679999999887644
No 137
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=33.89 E-value=1.1e+02 Score=27.80 Aligned_cols=70 Identities=10% Similarity=0.169 Sum_probs=47.4
Q ss_pred ccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchh----HHHHhCCC---cEEec---hhHHHHHHHHHHHHhcCC
Q 018167 40 LNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTG----LADRFGKS---RVFNT---PLCEQGIVGFAIGLAAMG 109 (360)
Q Consensus 40 ~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~----~~~~~gp~---r~i~~---GIaE~~~vg~AaGlA~~G 109 (360)
...-..|.+++.++.++..+|++++=-.+.+|.|....- +.++| |+ +++|+ +..+..++--|+=|+..|
T Consensus 67 qps~~~~~~~f~~l~~~g~~ii~i~iSs~LSGTy~sA~~aa~~~~e~~-~~~~I~ViDS~~~s~g~g~~v~~A~~l~~~G 145 (297)
T 3nyi_A 67 LPSVESYADVFRSFVEQGFPVVCFTITTLFSGSYNSAINAKSLVLEDY-PDANICVIDSKQNTVTQALLIDQFVRMLEDG 145 (297)
T ss_dssp CCCHHHHHHHHHHHHTTTCCEEEEESCTTTCSHHHHHHHHHHHHHHHC-TTCCEEEEECSCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEEECCCcHhHHHHHHHHHHHHHHhhC-CCCeEEEEeCCchHHHHHHHHHHHHHHHHcC
Confidence 334667888888888888889888754443344432222 23688 66 66774 667778888888888888
Q ss_pred C
Q 018167 110 N 110 (360)
Q Consensus 110 ~ 110 (360)
.
T Consensus 146 ~ 146 (297)
T 3nyi_A 146 L 146 (297)
T ss_dssp C
T ss_pred C
Confidence 5
No 138
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=33.88 E-value=76 Score=32.35 Aligned_cols=99 Identities=13% Similarity=0.103 Sum_probs=56.4
Q ss_pred HHHHHHHHhcCC------------CeeEEEecCcccH-H--HHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCC
Q 018167 98 IVGFAIGLAAMG------------NRAIAEIQFADYI-F--PAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGG 162 (360)
Q Consensus 98 ~vg~AaGlA~~G------------~~p~~~~~f~~F~-~--ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g 162 (360)
.++.|.|+|+.- -+.++++ ..+=- + .+++.+. .++..++ +. .+++.+..+.. -++
T Consensus 119 gl~~AvG~AlA~~~~~~~~n~~~~d~~v~~v-~GDG~~~eG~~~Eal~-~A~~~~L------~~-livi~nnN~~~-i~~ 188 (632)
T 3l84_A 119 GVANAVGFAMAAKKAQNLLGSDLIDHKIYCL-CGDGDLQEGISYEACS-LAGLHKL------DN-FILIYDSNNIS-IEG 188 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTTCCCCEEEE-EEHHHHHSHHHHHHHH-HHHHTTC------TT-EEEEEEECSEE-TTE
T ss_pred HHHHHHHHHHHHHhhccccccCCCCCeEEEE-ECCcchhhccHHHHHH-HHHHcCC------Cc-EEEEEECCCcc-ccc
Confidence 456666666642 2344443 45532 2 5666665 4565553 33 34444544321 122
Q ss_pred CCC--CchHH-HHHcCCCCcEEEeeC---CHHHHHHHHHHhHhCCCCEEEec
Q 018167 163 HYH--SQSPE-AFFCHVPGLKVVIPR---SPRQAKGLLLSCIRDPNPVVFFE 208 (360)
Q Consensus 163 ~~H--s~~d~-a~~r~iPn~~V~~P~---d~~e~~~~l~~a~~~~~P~~i~~ 208 (360)
.++ ..+|+ ..+++. |+.++ +. |..++..+++.|.+.++|++|..
T Consensus 189 ~~~~~~~~d~~~~~~a~-G~~~~-~vdGhd~~~l~~al~~A~~~~~P~lI~v 238 (632)
T 3l84_A 189 DVGLAFNENVKMRFEAQ-GFEVL-SINGHDYEEINKALEQAKKSTKPCLIIA 238 (632)
T ss_dssp EGGGTCCCCHHHHHHHT-TCEEE-EEETTCHHHHHHHHHHHHTCSSCEEEEE
T ss_pred chhhhcChhHHHHHHHc-CCeEE-EEeeCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 222 12333 455665 78877 54 78999999999988899999853
No 139
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=33.84 E-value=78 Score=27.47 Aligned_cols=66 Identities=15% Similarity=0.131 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHhcCCCeeEEEecccc--CC---------------------------------cHHHHHHHHhcCCeE
Q 018167 249 QLSIMEQACLDAEKEGISCELIDLKTLI--PW---------------------------------DKETVEASVRKTGRL 293 (360)
Q Consensus 249 ~~~~al~Aa~~L~~~Gi~v~Vi~~~~ik--P~---------------------------------d~~~l~~~~~~~~~i 293 (360)
....+..+++.|++.|.+++++|+.... |. |.+.+.+.+...+.|
T Consensus 17 t~~l~~~~~~~l~~~g~ev~~~dL~~~~~~P~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~dd~~~~~~~l~~aD~i 96 (228)
T 3tem_A 17 NGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTLSNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLV 96 (228)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEETTTTTCCCCCCGGGBCSCCSCTTSCCHHHHHHHHHHHTCBCHHHHHHHHHHHHCSEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEhhhcCCcccCCHHHHhhhccccccccchhhhhhhhhcCCCcHHHHHHHHHHHhCCEE
Confidence 4455666777888889999999997643 32 122345567778887
Q ss_pred EEEeCCCcCCchHHHHHHHHHH
Q 018167 294 LISHEAPVTGGFGAEISASILE 315 (360)
Q Consensus 294 vvvEe~~~~GGlgs~v~~~l~~ 315 (360)
|+.--- ..+++-+.+..++-.
T Consensus 97 v~~~P~-y~~~~p~~lK~~iD~ 117 (228)
T 3tem_A 97 IFQFPL-YWFSVPAILKGWMDR 117 (228)
T ss_dssp EEEEEC-BTTBCCHHHHHHHHH
T ss_pred EEECCh-hhcccCHHHHHHHHH
Confidence 776443 457777777777654
No 140
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=33.76 E-value=57 Score=24.20 Aligned_cols=68 Identities=12% Similarity=0.161 Sum_probs=42.1
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHH-h-cCCeEEEEeCCCcCCchHHH
Q 018167 238 GSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASV-R-KTGRLLISHEAPVTGGFGAE 308 (360)
Q Consensus 238 G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~-~-~~~~ivvvEe~~~~GGlgs~ 308 (360)
..+|+|.+.-. -..|.+|.+.|++.|++.+.+|+..- |--.+.+.+.. . .+-..+++. +...||+...
T Consensus 15 ~~~v~vy~~~~-Cp~C~~ak~~L~~~~i~y~~idI~~~-~~~~~~l~~~~~g~~~vP~ifi~-g~~igG~d~l 84 (99)
T 3qmx_A 15 SAKIEIYTWST-CPFCMRALALLKRKGVEFQEYCIDGD-NEAREAMAARANGKRSLPQIFID-DQHIGGCDDI 84 (99)
T ss_dssp CCCEEEEECTT-CHHHHHHHHHHHHHTCCCEEEECTTC-HHHHHHHHHHTTTCCCSCEEEET-TEEEESHHHH
T ss_pred CCCEEEEEcCC-ChhHHHHHHHHHHCCCCCEEEEcCCC-HHHHHHHHHHhCCCCCCCEEEEC-CEEEeChHHH
Confidence 45677777554 47788999999999999999998762 11112232222 1 122345554 4467887653
No 141
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=33.76 E-value=45 Score=26.20 Aligned_cols=32 Identities=22% Similarity=0.222 Sum_probs=24.6
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEec
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~ 273 (360)
..++|+++|.+... .++.|.+.|+++.++|..
T Consensus 8 ~~viIiG~G~~G~~---la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSL---LGEKLLASDIPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHH---HHHHHHHTTCCEEEEESC
T ss_pred CCEEEECcCHHHHH---HHHHHHHCCCCEEEEECC
Confidence 57999999986554 456777889999999853
No 142
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=33.61 E-value=64 Score=29.96 Aligned_cols=54 Identities=11% Similarity=0.176 Sum_probs=34.9
Q ss_pred EEEEEechh----HHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEe
Q 018167 241 ITLVGWGAQ----LSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISH 297 (360)
Q Consensus 241 v~Iia~G~~----~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvE 297 (360)
-++|.++++ -..|..+++.|.++|++++++++.. .+.+.+.+.+.+++.+++.-
T Consensus 253 ~i~i~y~S~~GnT~~lA~~ia~~l~~~g~~v~~~~~~~---~~~~~~~~~~~~~d~ii~g~ 310 (398)
T 1ycg_A 253 KAVIAYDTMWLSTEKMAHALMDGLVAGGCEVKLFKLSV---SDRNDVIKEILDARAVLVGS 310 (398)
T ss_dssp EEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGG---SCHHHHHHHHHHCSEEEEEC
T ss_pred eEEEEEECCccHHHHHHHHHHHHHHhcCCeEEEEECCC---CCHHHHHHHHHHCCEEEEEC
Confidence 345556554 4456666667777799999888754 45555656666777776663
No 143
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=33.51 E-value=1.5e+02 Score=29.90 Aligned_cols=96 Identities=11% Similarity=0.071 Sum_probs=51.9
Q ss_pred HHHHHHHHhcCC------CeeEEEecCcc--cH-HHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCC---C
Q 018167 98 IVGFAIGLAAMG------NRAIAEIQFAD--YI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHY---H 165 (360)
Q Consensus 98 ~vg~AaGlA~~G------~~p~~~~~f~~--F~-~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~---H 165 (360)
.++.|.|+|+.. -+.++++ ..+ |. ..+++.+. .++..++ |. .+++....+..- ++.+ +
T Consensus 126 gl~~A~G~AlA~~~~~~~~~~vv~v-~GDG~~~eG~~~Eal~-~A~~~~l------~~-livi~nnN~~~i-~~~~~~~~ 195 (616)
T 3mos_A 126 GLGAACGMAYTGKYFDKASYRVYCL-LGDGELSEGSVWEAMA-FASIYKL------DN-LVAILDINRLGQ-SDPAPLQH 195 (616)
T ss_dssp HHHHHHHHHHHHHHTSCCSCCEEEE-EETGGGGSHHHHHHHH-HHHHTTC------TT-EEEEEEECSBCS-SSBCTTTT
T ss_pred ccHHHHHHHHHHHHhCCCCCEEEEE-ECccccccCcHHHHHH-HHHHcCC------Cc-EEEEEECCCCCC-cCCccccc
Confidence 456677777641 1344443 444 33 25666665 3565553 43 344454443222 2222 2
Q ss_pred CchHH-HHHcCCCCcEEEeeC---CHHHHHHHHHHhHhCCCCEEEe
Q 018167 166 SQSPE-AFFCHVPGLKVVIPR---SPRQAKGLLLSCIRDPNPVVFF 207 (360)
Q Consensus 166 s~~d~-a~~r~iPn~~V~~P~---d~~e~~~~l~~a~~~~~P~~i~ 207 (360)
..+|+ ..+++. |+.++ +. |..++..+++.+ .++|++|.
T Consensus 196 ~~~~~~~~~~a~-G~~~~-~VdG~d~~~l~~al~~~--~~~P~lI~ 237 (616)
T 3mos_A 196 QMDIYQKRCEAF-GWHAI-IVDGHSVEELCKAFGQA--KHQPTAII 237 (616)
T ss_dssp CHHHHHHHHHHT-TCEEE-EEETTCHHHHHHHHHSC--CSSCEEEE
T ss_pred ChHHHHHHHHHc-CCeEE-EEcCCCHHHHHHHHHhc--CCCCEEEE
Confidence 34554 455555 77766 44 677777777655 58999984
No 144
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=33.42 E-value=1.2e+02 Score=28.21 Aligned_cols=65 Identities=12% Similarity=0.172 Sum_probs=41.3
Q ss_pred chhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHH
Q 018167 247 GAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILE 315 (360)
Q Consensus 247 G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~ 315 (360)
|++-..|..+++.|+++|++++++++... +.+.+.+.+..++.||+.-- ...|++-..+..++..
T Consensus 268 GnT~~la~~i~~~l~~~g~~v~~~~l~~~---~~~~~~~~l~~~D~iiigsP-~y~~~~~~~~k~fld~ 332 (414)
T 2q9u_A 268 GTTHRMALALLDGARSTGCETVLLEMTSS---DITKVALHTYDSGAVAFASP-TLNNTMMPSVAAALNY 332 (414)
T ss_dssp SHHHHHHHHHHHHHHHTTCEEEEEEGGGC---CHHHHHHHHHTCSEEEEECC-CBTTBCCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCeEEEEEcCcC---CHHHHHHHHHhCCEEEEEcC-ccCcCchHHHHHHHHH
Confidence 44556666677777778999999987654 44445556667777666533 3456665555555543
No 145
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=33.34 E-value=1e+02 Score=29.35 Aligned_cols=32 Identities=9% Similarity=0.051 Sum_probs=22.6
Q ss_pred CCCCcEEEeeCCHHHHHHHHHHhHh----CCCCEEEe
Q 018167 175 HVPGLKVVIPRSPRQAKGLLLSCIR----DPNPVVFF 207 (360)
Q Consensus 175 ~iPn~~V~~P~d~~e~~~~l~~a~~----~~~P~~i~ 207 (360)
.+|.+. +.-.|+.++..+++.|++ .++|++|-
T Consensus 247 G~~~~~-VdG~D~~av~~a~~~A~~~ar~~~~P~lIe 282 (400)
T 2bfd_A 247 GIMSIR-VDGNDVFAVYNATKEARRRAVAENQPFLIE 282 (400)
T ss_dssp TCEEEE-EETTCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCcEEE-EeCCCHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 344442 233478999999988886 58999883
No 146
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=33.10 E-value=1.1e+02 Score=31.38 Aligned_cols=100 Identities=12% Similarity=0.033 Sum_probs=55.8
Q ss_pred HHHHHHHHhcCC---------------CeeEEEecCccc--H-HHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCC
Q 018167 98 IVGFAIGLAAMG---------------NRAIAEIQFADY--I-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVG 159 (360)
Q Consensus 98 ~vg~AaGlA~~G---------------~~p~~~~~f~~F--~-~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g 159 (360)
-++.|.|+|+.- -+.++++ ..+= . ..+++.+. .++..++ |. .+++....+. +
T Consensus 121 gl~~AvG~AlA~~~~~~~~~~~~~~~~d~~v~~i-~GDG~l~eG~~~Eal~-~A~~~~L------~~-livi~dnN~~-~ 190 (663)
T 3kom_A 121 GVANAVGMALGEKLLSDRYNTPDLKVIDHHTYVF-LGDGCLMEGVSHEACS-LAGTLGL------NK-LVAFWDDNNI-S 190 (663)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTBCSCCCCEEEE-ECHHHHHSHHHHHHHH-HHHHHTC------TT-EEEEEEECC---
T ss_pred HHHHHHHHHHhHHhhcccccccccccCCCeEEEE-ECchhhhhchHHHHHH-HHHHhCC------Ce-EEEEEECCCc-c
Confidence 356667776642 1344454 4553 2 24566655 4666553 43 3444554443 2
Q ss_pred CCCCCC--CchHH-HHHcCCCCcEEEeeC---CHHHHHHHHHHhHh-CCCCEEEec
Q 018167 160 HGGHYH--SQSPE-AFFCHVPGLKVVIPR---SPRQAKGLLLSCIR-DPNPVVFFE 208 (360)
Q Consensus 160 ~~g~~H--s~~d~-a~~r~iPn~~V~~P~---d~~e~~~~l~~a~~-~~~P~~i~~ 208 (360)
-++.+. ..+|+ ..+++. |+.++-+. |..++..+++.|.+ .++|++|..
T Consensus 191 i~~~~~~~~~~d~~~~~~a~-G~~~~~~vdG~d~~~l~~al~~A~~~~~~P~lI~~ 245 (663)
T 3kom_A 191 IDGDTKGWFSDNTPERFRAY-GWHVIENVDGHDFVAIEKAINEAHSQQQKPTLICC 245 (663)
T ss_dssp ---CGGGTCCCCHHHHHHHT-TCEEEEEEETTCHHHHHHHHHHHHHCSSSCEEEEE
T ss_pred cccchhhhcchhHHHHHHHC-CCeEEEEEcCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 222222 12333 455665 78877443 78999999999988 599999953
No 147
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=32.69 E-value=91 Score=26.03 Aligned_cols=64 Identities=5% Similarity=-0.008 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEeccccCCc----------HHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHH
Q 018167 250 LSIMEQACLDAEKEGISCELIDLKTLIPWD----------KETVEASVRKTGRLLISHEAPVTGGFGAEISASILE 315 (360)
Q Consensus 250 ~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d----------~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~ 315 (360)
...+..+++.++ .|.+++++|+..+-.++ .+.+.+.+...+.+|+.-- ...+++-+.+..++-.
T Consensus 19 ~~la~~~~~~~~-~~~~v~~~dl~~lp~~~~~~~~~~~~~~~~~~~~i~~AD~iV~~sP-~y~~~~p~~lK~~iD~ 92 (192)
T 3fvw_A 19 RQLAKKAETIIG-DRAQVSYLSYDRVPFFNQDLETSVHPEVAHAREEVQEADAIWIFSP-VYNYAIPGPVKNLLDW 92 (192)
T ss_dssp HHHHHHHHHHHT-TSSEEEECCCSSCCCCCGGGTTSCCHHHHHHHHHHHHCSEEEEECC-CBTTBCCHHHHHHHHH
T ss_pred HHHHHHHHHhcC-CCCEEEEEeCccCCCCCcccccCCcHHHHHHHHHHHhCCEEEEECc-ccccCCCHHHHHHHHH
Confidence 344555556665 68999999998752222 2456778888888877643 3467777776666543
No 148
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=32.39 E-value=1.3e+02 Score=27.82 Aligned_cols=70 Identities=9% Similarity=0.193 Sum_probs=41.2
Q ss_pred EEEEechhH----HHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHH
Q 018167 242 TLVGWGAQL----SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILE 315 (360)
Q Consensus 242 ~Iia~G~~~----~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~ 315 (360)
++|.++++. ..|...++.|.++|++++++++. ..+.+.+.+.+.+++.+++.- ....+|.-..+..++..
T Consensus 255 v~i~y~S~~Gnt~~lA~~i~~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~d~ii~gs-p~~~~~~~~~~~~~l~~ 328 (402)
T 1e5d_A 255 VVIFYDSMWHSTEKMARVLAESFRDEGCTVKLMWCK---ACHHSQIMSEISDAGAVIVGS-PTHNNGILPYVAGTLQY 328 (402)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEETT---TSCHHHHHHHHHTCSEEEEEC-CCBTTBCCHHHHHHHHH
T ss_pred EEEEEECCChhHHHHHHHHHHHHHhCCCeEEEEECC---CCCHHHHHHHHHHCCEEEEEC-CccCCCchHHHHHHHHH
Confidence 344455543 44555666677778888888865 345555666667777666553 33345554455555443
No 149
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=32.31 E-value=1.2e+02 Score=25.31 Aligned_cols=68 Identities=9% Similarity=0.081 Sum_probs=44.9
Q ss_pred chhHHHHHHHHHHHHhcC--CCeeEEEec--cc--cCCcH-----------------------------HHHHHHHhcCC
Q 018167 247 GAQLSIMEQACLDAEKEG--ISCELIDLK--TL--IPWDK-----------------------------ETVEASVRKTG 291 (360)
Q Consensus 247 G~~~~~al~Aa~~L~~~G--i~v~Vi~~~--~i--kP~d~-----------------------------~~l~~~~~~~~ 291 (360)
|.....+..+++.+++.| .+++++|+. .. .+++. +.+.+.+...+
T Consensus 17 s~t~~la~~~~~~~~~~g~~~~v~~~dL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~aD 96 (208)
T 2hpv_A 17 SRSVRALETFLASYRETNPSDEIEILDVYAPETNMPEIDEELLSAWGALRAGAAFETLSENQQQKVARFNELTDQFLSAD 96 (208)
T ss_dssp CHHHHHHHHHHHHHHHHCTTSEEEEEETTCGGGCCCCCCHHHHHHHHHHHHTCCGGGSCHHHHHHHHHHHHHHHHHHHCS
T ss_pred CHHHHHHHHHHHHHHHhCCCCeEEEeeCCcccCCCCcCCHHHHHhhcCcccccccccCCHHHHhhHHHHHHHHHHHHhCC
Confidence 334445566677788777 999999998 64 34432 23455677788
Q ss_pred eEEEEeCCCcCCchHHHHHHHHHH
Q 018167 292 RLLISHEAPVTGGFGAEISASILE 315 (360)
Q Consensus 292 ~ivvvEe~~~~GGlgs~v~~~l~~ 315 (360)
.||++=- ...+++-+.+..++-.
T Consensus 97 ~iv~~~P-~y~~~~pa~lK~~iD~ 119 (208)
T 2hpv_A 97 KVVIANP-MWNLNVPTRLKAWVDT 119 (208)
T ss_dssp EEEEEEE-CBTTBCCHHHHHHHHH
T ss_pred EEEEEec-cccCCCCHHHHHHHHH
Confidence 7777644 3468888888777754
No 150
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=32.14 E-value=82 Score=29.37 Aligned_cols=59 Identities=20% Similarity=0.226 Sum_probs=40.3
Q ss_pred eeCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEecccc-------------CCcHHHHHHHHhcCCeEEEEeC
Q 018167 236 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLI-------------PWDKETVEASVRKTGRLLISHE 298 (360)
Q Consensus 236 ~~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ik-------------P~d~~~l~~~~~~~~~ivvvEe 298 (360)
..++.+.|++.|.......++ +++.|+++-++|..--. ..|.+.+.+.+++.+ +|+.|-
T Consensus 10 ~~~~~IlIlG~G~lg~~la~a---a~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~d-vi~~~~ 81 (377)
T 3orq_A 10 KFGATIGIIGGGQLGKMMAQS---AQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCD-VITYEF 81 (377)
T ss_dssp CTTCEEEEECCSHHHHHHHHH---HHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCS-EEEESS
T ss_pred CCCCEEEEECCCHHHHHHHHH---HHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCC-cceecc
Confidence 356789999999865554444 44569999999864222 246678888887765 567753
No 151
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=31.60 E-value=80 Score=26.10 Aligned_cols=68 Identities=13% Similarity=0.214 Sum_probs=44.0
Q ss_pred echhHHHHHHHHHHHHhcCCCeeEEEeccccCC----------c----HHHHHHHHhcCCeEEEEeCCCcCCchHHHHHH
Q 018167 246 WGAQLSIMEQACLDAEKEGISCELIDLKTLIPW----------D----KETVEASVRKTGRLLISHEAPVTGGFGAEISA 311 (360)
Q Consensus 246 ~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~----------d----~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~ 311 (360)
+|++-..|..+++.|++.|.+++++|+...-|. | .+. .+.+..++.||+.--- ..|++...+..
T Consensus 14 ~g~T~~la~~i~~~l~~~g~~v~~~~l~~~~~~~~~~~~~~~~~d~~~~~~-~~~l~~aD~ii~gsP~-y~~~~~~~lk~ 91 (199)
T 2zki_A 14 YGSIVELAKEIGKGAEEAGAEVKIRRVRETLPPEFQSRIPFDKVKDIPEVT-LDDMRWADGFAIGSPT-RYGNMAGGLKT 91 (199)
T ss_dssp SSHHHHHHHHHHHHHHHHSCEEEEEECCCCSCGGGGTTCCGGGSTTSCBCC-HHHHHHCSEEEEEEEC-BTTBCCHHHHH
T ss_pred ccHHHHHHHHHHHHHHhCCCEEEEEehhHhCChhhhhccCCCccccccccc-HHHHHhCCEEEEECCc-cccCccHHHHH
Confidence 466666777777888888999999999875111 1 111 3445567777666443 45777777777
Q ss_pred HHHH
Q 018167 312 SILE 315 (360)
Q Consensus 312 ~l~~ 315 (360)
++..
T Consensus 92 ~ld~ 95 (199)
T 2zki_A 92 FLDT 95 (199)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 6644
No 152
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=31.51 E-value=43 Score=27.14 Aligned_cols=31 Identities=26% Similarity=0.307 Sum_probs=24.9
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCCeeEEEec
Q 018167 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (360)
Q Consensus 240 dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~ 273 (360)
|++||+-|. ..+++|..|.+.|.++.+|+..
T Consensus 3 ~vvIIGgG~---~Gl~~A~~l~~~g~~v~lie~~ 33 (180)
T 2ywl_A 3 DVIVVGGGP---SGLSAALFLARAGLKVLVLDGG 33 (180)
T ss_dssp EEEEECCSH---HHHHHHHHHHHTTCCEEEEECS
T ss_pred eEEEECCCH---HHHHHHHHHHHCCCcEEEEeCC
Confidence 688999886 3556777787889999999864
No 153
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=30.78 E-value=1.6e+02 Score=22.08 Aligned_cols=67 Identities=15% Similarity=0.186 Sum_probs=42.4
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHh-----cCCeEEEEeCCCcCCchHHH
Q 018167 238 GSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR-----KTGRLLISHEAPVTGGFGAE 308 (360)
Q Consensus 238 G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~-----~~~~ivvvEe~~~~GGlgs~ 308 (360)
...++|.+. +.-..|.+|.+.|++.|++.+++|+.... |.+.+.+.++ .+-..+.+ ++...||+...
T Consensus 16 ~~~v~vy~~-~~Cp~C~~ak~~L~~~~i~~~~~dvd~~~--~~~~~~~~l~~~~g~~tvP~vfi-~g~~igG~d~l 87 (114)
T 3h8q_A 16 RSRVVIFSK-SYCPHSTRVKELFSSLGVECNVLELDQVD--DGARVQEVLSEITNQKTVPNIFV-NKVHVGGCDQT 87 (114)
T ss_dssp HCSEEEEEC-TTCHHHHHHHHHHHHTTCCCEEEETTTST--THHHHHHHHHHHHSCCSSCEEEE-TTEEEESHHHH
T ss_pred cCCEEEEEc-CCCCcHHHHHHHHHHcCCCcEEEEecCCC--ChHHHHHHHHHHhCCCccCEEEE-CCEEEeCHHHH
Confidence 456777665 44577888999999999999999886532 2233333221 23334555 45567987553
No 154
>2bmv_A Flavodoxin; electron transport, flavoprotein, FMN, transport protein; 2.11A {Helicobacter pylori} PDB: 2w5u_A* 1fue_A*
Probab=30.68 E-value=34 Score=27.71 Aligned_cols=32 Identities=19% Similarity=0.229 Sum_probs=22.9
Q ss_pred EEEEechhHHHHHHHHHHHHhc-CCCeeEEEecc
Q 018167 242 TLVGWGAQLSIMEQACLDAEKE-GISCELIDLKT 274 (360)
Q Consensus 242 ~Iia~G~~~~~al~Aa~~L~~~-Gi~v~Vi~~~~ 274 (360)
++|.|++.+....+.|+.+.+. |. ++++++..
T Consensus 4 ~~I~Y~S~tGnT~~~A~~ia~~lg~-~~~~~~~~ 36 (164)
T 2bmv_A 4 IGIFFGTDSGNAEAIAEKISKAIGN-AEVVDVAK 36 (164)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHCS-EEEEEGGG
T ss_pred EEEEEECCCchHHHHHHHHHHHcCC-cEEEeccc
Confidence 3566888888888888877654 66 77777654
No 155
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=30.24 E-value=18 Score=36.36 Aligned_cols=111 Identities=14% Similarity=0.065 Sum_probs=61.5
Q ss_pred CCcEEech-h-HHHHHHHHHHHHhcCC-CeeEEEecCcc--cHHHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCC
Q 018167 85 KSRVFNTP-L-CEQGIVGFAIGLAAMG-NRAIAEIQFAD--YIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVG 159 (360)
Q Consensus 85 p~r~i~~G-I-aE~~~vg~AaGlA~~G-~~p~~~~~f~~--F~~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g 159 (360)
|.+|+..+ . +=-..++.|.|+|+.. -++++++ ..+ |.+ .++.+- .++..+ +|+ .+|+...+++.-
T Consensus 414 ~~~~~~~~g~g~mG~~l~~AiGaala~~~~~vv~i-~GDG~~~~-~~~~L~-ta~~~~------l~~-~ivv~nN~~~~~ 483 (589)
T 2pgn_A 414 PRRLVTSMAEGILGCGFPMALGAQLAEPNSRVFLG-TGDGALYY-HFNEFR-VAVEHK------LPV-ITMVFTNESYGA 483 (589)
T ss_dssp TTCEESCTTTCCTTCHHHHHHHHHHHCTTSCEEEE-EEHHHHHH-HGGGHH-HHHHTT------CCC-EEEEEECSBCHH
T ss_pred CCcEECCCCcchhhhHHHHHHHHHHhCCCCcEEEE-EeeHHHHh-hHHHHH-HHHHhC------CCe-EEEEEECCCccc
Confidence 66788741 1 1113567888888753 3555554 444 332 344443 244444 466 566665544311
Q ss_pred C--------CCC--CC-CchHH-HHHcCCCCcEEEeeCCHHHHHHHHHHhHhCCCCEEE
Q 018167 160 H--------GGH--YH-SQSPE-AFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVF 206 (360)
Q Consensus 160 ~--------~g~--~H-s~~d~-a~~r~iPn~~V~~P~d~~e~~~~l~~a~~~~~P~~i 206 (360)
. ++. +. ...|+ .+.++. |+..+...++.|+..+++++++.++|++|
T Consensus 484 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~li 541 (589)
T 2pgn_A 484 NWTLMNHQFGQNNWTEFMNPDWVGIAKAF-GAYGESVRETGDIAGALQRAIDSGKPALI 541 (589)
T ss_dssp HHHHHHHHHSSCCSCBCCCCCHHHHHHHH-TCEEEECTTTCCHHHHHHHHHHHCSCEEE
T ss_pred chHHHHhhcCCCccccCCCCCHHHHHHHC-CCeEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence 0 010 11 11233 222332 56666778999999999999988999988
No 156
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=29.98 E-value=84 Score=27.66 Aligned_cols=44 Identities=16% Similarity=0.169 Sum_probs=32.2
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHH
Q 018167 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETV 283 (360)
Q Consensus 237 ~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l 283 (360)
.+++++||+.|. .+++.|..|.+.|.+|+++....-.+.+.+..
T Consensus 151 ~~~~vvViGgG~---ig~e~A~~l~~~G~~Vt~v~~~~~~~~~~~~~ 194 (314)
T 4a5l_A 151 RNKVLMVVGGGD---AAMEEALHLTKYGSKVIILHRRDAFRASKTMQ 194 (314)
T ss_dssp TTSEEEEECSSH---HHHHHHHHHTTTSSEEEEECSSSSCCSCHHHH
T ss_pred CCCeEEEECCCh---HHHHHHHHHHHhCCeeeeecccccccccchhh
Confidence 467899999887 46778888988899999997554434444433
No 157
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=29.90 E-value=98 Score=31.95 Aligned_cols=76 Identities=9% Similarity=-0.066 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCC--CchHH-HHHcCCCCcEEEee---CCHHHHHHHHHHh
Q 018167 124 PAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH--SQSPE-AFFCHVPGLKVVIP---RSPRQAKGLLLSC 197 (360)
Q Consensus 124 ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~H--s~~d~-a~~r~iPn~~V~~P---~d~~e~~~~l~~a 197 (360)
.++|-+. .++..+++ ++ +++.+..+.. -++++. ..+|+ ..+++. |+.++.. .|..++..+++.|
T Consensus 184 ~~~EAl~-~A~~~~L~-----nl--i~i~d~N~~s-i~~~~~~~~~~~~~~~~~a~-G~~~~~V~DG~D~~al~~Al~~A 253 (700)
T 3rim_A 184 VTSEASS-LAAVQQLG-----NL--IVFYDRNQIS-IEDDTNIALCEDTAARYRAY-GWHVQEVEGGENVVGIEEAIANA 253 (700)
T ss_dssp HHHHHHH-HHHHTTCT-----TE--EEEEEECSEE-TTEEGGGTCCCCHHHHHHHH-TCEEEEEECTTCHHHHHHHHHHH
T ss_pred hHHHHHH-HHHHcCCC-----cE--EEEEECCCcc-cccchhhccchhHHHHHHHc-CCeEEEECCCCCHHHHHHHHHHH
Confidence 4566654 46666532 23 3444444322 122221 13343 445554 7777765 5889999999998
Q ss_pred Hh-CCCCEEEecc
Q 018167 198 IR-DPNPVVFFEP 209 (360)
Q Consensus 198 ~~-~~~P~~i~~~ 209 (360)
.+ .++|++|...
T Consensus 254 ~~~~~~P~lI~~~ 266 (700)
T 3rim_A 254 QAVTDRPSFIALR 266 (700)
T ss_dssp HHCCSSCEEEEEE
T ss_pred HHcCCCCEEEEEE
Confidence 87 5899999543
No 158
>3pu6_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.60A {Wolinella succinogenes}
Probab=29.62 E-value=91 Score=25.54 Aligned_cols=55 Identities=11% Similarity=0.053 Sum_probs=35.7
Q ss_pred cEEEEEechhH----HHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHh--cCCeEEEEeC
Q 018167 240 DITLVGWGAQL----SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR--KTGRLLISHE 298 (360)
Q Consensus 240 dv~Iia~G~~~----~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~--~~~~ivvvEe 298 (360)
+++|+++|+.. .....++++|++.=-+++++|.-+ -|++.- ..+. +++++|+|+-
T Consensus 4 ~ilVlGiGN~L~gDDG~G~~v~~~L~~~~p~v~vid~Gt-~~~~l~---~~l~~~~~d~lIiVDA 64 (157)
T 3pu6_A 4 KKVLLCVGNELRGDDGVAIALGRLVEEQMPEWSVFFGYD-TPESEF---GKLRELAPDVIVVADA 64 (157)
T ss_dssp CEEEEEECCTTBGGGGHHHHHHHHHHHHCTTEEEEEEET-CGGGGH---HHHHHHCCSEEEEEEE
T ss_pred CEEEEEECCcccccccHHHHHHHHHHhhCCCeEEEECCC-CHHHHH---HHHHhcCCCEEEEEEe
Confidence 57899999865 235566777763312799999887 555422 3333 4788888764
No 159
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=29.57 E-value=44 Score=29.80 Aligned_cols=31 Identities=23% Similarity=0.336 Sum_probs=23.5
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEe
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~ 272 (360)
-|++||+.|+.- +.||..|.+.|.++.||+-
T Consensus 7 yDvvIIG~GpAG---l~aA~~l~~~g~~V~liE~ 37 (312)
T 4gcm_A 7 FDIAIIGAGPAG---MTAAVYASRANLKTVMIER 37 (312)
T ss_dssp EEEEEECCSHHH---HHHHHHHHHTTCCEEEEES
T ss_pred CCEEEECCCHHH---HHHHHHHHHCCCCEEEEec
Confidence 389999999743 4455666677999999974
No 160
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=29.42 E-value=50 Score=25.67 Aligned_cols=66 Identities=14% Similarity=0.170 Sum_probs=43.6
Q ss_pred CCcEEEEEech----hHHHHHHHHHHHHhcCCC---eeEEEeccccCCcHHHHHHHHh-----cCCeEEEEeCCCcCCch
Q 018167 238 GSDITLVGWGA----QLSIMEQACLDAEKEGIS---CELIDLKTLIPWDKETVEASVR-----KTGRLLISHEAPVTGGF 305 (360)
Q Consensus 238 G~dv~Iia~G~----~~~~al~Aa~~L~~~Gi~---v~Vi~~~~ikP~d~~~l~~~~~-----~~~~ivvvEe~~~~GGl 305 (360)
..+|+|.+.|+ .-..|.+|.+.|++.|++ .+.+|+.. |.+ +++.++ .+-..|++.. ...||+
T Consensus 15 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~~----~~~-~~~~l~~~sg~~tvP~vfI~g-~~iGG~ 88 (121)
T 3gx8_A 15 SAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVLE----DPE-LREGIKEFSEWPTIPQLYVNK-EFIGGC 88 (121)
T ss_dssp SCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECTT----CHH-HHHHHHHHHTCCSSCEEEETT-EEEESH
T ss_pred cCCEEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEecC----CHH-HHHHHHHHhCCCCCCeEEECC-EEEecH
Confidence 46788888883 567788899999999998 88888753 333 223332 2334566654 457987
Q ss_pred HHHH
Q 018167 306 GAEI 309 (360)
Q Consensus 306 gs~v 309 (360)
....
T Consensus 89 d~l~ 92 (121)
T 3gx8_A 89 DVIT 92 (121)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 161
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=29.29 E-value=74 Score=28.83 Aligned_cols=65 Identities=11% Similarity=-0.028 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEeccccC----------------------------------CcHHHHHHHHhcCCeEEE
Q 018167 250 LSIMEQACLDAEKEGISCELIDLKTLIP----------------------------------WDKETVEASVRKTGRLLI 295 (360)
Q Consensus 250 ~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP----------------------------------~d~~~l~~~~~~~~~ivv 295 (360)
...+..+++.|++.|.+|+|+|+...++ -|.+..++.+.....||+
T Consensus 39 ~aL~~~~~~~l~~~G~eV~v~DLy~~~f~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~aD~iv~ 118 (280)
T 4gi5_A 39 GALKNFAIRHLQQAGHEVQVSDLYAMRWKAGYDADDSGAPPVGEFWRPTLDSKQAFAQGTQSADIVAEQEKLLWADTVIF 118 (280)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEETTTTTCCCSCCGGGSSSSCSSSSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHHHHCCCeEEEEEccccCCCCcCCHHHhcccccccccChhhHHHHHhhcCCCcHHHHHHHHHHHhCCEEEE
Confidence 3445567778888999999999975432 123445566777888777
Q ss_pred EeCCCcCCchHHHHHHHHHH
Q 018167 296 SHEAPVTGGFGAEISASILE 315 (360)
Q Consensus 296 vEe~~~~GGlgs~v~~~l~~ 315 (360)
+--- ..+++-+.+..++-+
T Consensus 119 ~~P~-~w~~~Pa~lK~~iDr 137 (280)
T 4gi5_A 119 QFPL-WWFSMPAIMKGWIDR 137 (280)
T ss_dssp EEEC-BTTBCCHHHHHHHHH
T ss_pred Eecc-ccccCcHHHHHHHHH
Confidence 6543 467787877777755
No 162
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=28.85 E-value=59 Score=25.75 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=24.6
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEec
Q 018167 238 GSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (360)
Q Consensus 238 G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~ 273 (360)
...++|+++|.... ..++.|.+.|.++.+||..
T Consensus 3 ~~~vlI~G~G~vG~---~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAI---NTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHH---HHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHH---HHHHHHHHCCCCEEEEECC
Confidence 35688998887554 3456777789999999874
No 163
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=28.65 E-value=90 Score=22.92 Aligned_cols=68 Identities=13% Similarity=0.137 Sum_probs=42.3
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHh-----cCCeEEEEeCCCcCCchHH
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR-----KTGRLLISHEAPVTGGFGA 307 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~-----~~~~ivvvEe~~~~GGlgs 307 (360)
..++|.+. +.-..|.+|...|++.|++.+.+|+....+-+.+.+.+.++ .+-..++++++...||+..
T Consensus 22 ~~v~ly~~-~~Cp~C~~ak~~L~~~~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i~~~~~igg~~~ 94 (103)
T 3nzn_A 22 GKVIMYGL-STCVWCKKTKKLLTDLGVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTIINDEKAIVGFKE 94 (103)
T ss_dssp SCEEEEEC-SSCHHHHHHHHHHHHHTBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEETTTEEEESCCH
T ss_pred CeEEEEcC-CCCchHHHHHHHHHHcCCCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEECCCEEEEcCCH
Confidence 45666654 34577888888999999999999988754433333333322 2234566655345677654
No 164
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=28.47 E-value=80 Score=31.34 Aligned_cols=146 Identities=12% Similarity=0.033 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHhc--CCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechh--HHHHHHHHHHHHhcC-CCeeEEEec
Q 018167 43 YSAINQALHIALET--DPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPL--CEQGIVGFAIGLAAM-GNRAIAEIQ 117 (360)
Q Consensus 43 r~a~~~~L~~l~~~--~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GI--aE~~~vg~AaGlA~~-G~~p~~~~~ 117 (360)
...+...|.+.+.+ |. ++ +..|++... +. ...+ . |.+|+..+- +=-..++.|.|+|+. .-++++++
T Consensus 376 ~~~v~~~l~~~l~~~~~~-iv-~~~d~G~~~-~~-~~~~---~-~~~~~~~~~~g~mG~~l~~A~G~ala~~~~~vv~i- 446 (565)
T 2nxw_A 376 PMDIARAVNDRVRAGQEP-LL-IAADMGDCL-FT-AMDM---I-DAGLMAPGYYAGMGFGVPAGIGAQCVSGGKRILTV- 446 (565)
T ss_dssp HHHHHHHHHHHHHTTCCC-CE-EEECSSHHH-HH-HTTS---C-CSCEECCTTTCCTTCHHHHHHHHHHHTTTCCEEEE-
T ss_pred HHHHHHHHHHhcccccCC-EE-EEecchHHH-HH-HHhC---C-CcEEEccCccccccccchHHHHHHHhCCCCcEEEE-
Confidence 34556677777665 43 33 244655110 10 1111 2 677775321 111245668888765 23555554
Q ss_pred CcccH-HHHHHHHHHHHHhcccccCCCccccceEEEcCCCCCC-----CCCC--CCCchHHH-HHcCCCCcEEEeeCCHH
Q 018167 118 FADYI-FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVG-----HGGH--YHSQSPEA-FFCHVPGLKVVIPRSPR 188 (360)
Q Consensus 118 f~~F~-~ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g-----~~g~--~Hs~~d~a-~~r~iPn~~V~~P~d~~ 188 (360)
..+-. +..+..+- .+...+ +|+ .+|+...+++.- ..+. .....|+. +.++. |+..+...+..
T Consensus 447 ~GDG~~~~~~~~l~-ta~~~~------l~~-~ivv~nN~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~ 517 (565)
T 2nxw_A 447 VGDGAFQMTGWELG-NCRRLG------IDP-IVILFNNASWEMLRTFQPESAFNDLDDWRFADMAAGM-GGDGVRVRTRA 517 (565)
T ss_dssp EEHHHHHHHGGGGG-GHHHHT------CCC-EEEEEECSBCHHHHHHCTTCGGGBCCCCCHHHHTGGG-TSEEEEECBHH
T ss_pred EechHHHhhHHHHH-HHHHhC------CCC-EEEEEECCCCcEEeeecccCCCCcCCCCCHHHHHHHc-CCCEEEeCCHH
Confidence 45522 11122222 123333 466 566555544311 1111 00112333 33333 67777788999
Q ss_pred HHHHHHHHhHhCCCCE-EE
Q 018167 189 QAKGLLLSCIRDPNPV-VF 206 (360)
Q Consensus 189 e~~~~l~~a~~~~~P~-~i 206 (360)
|+..+++++++.++|+ +|
T Consensus 518 el~~al~~a~~~~gp~~li 536 (565)
T 2nxw_A 518 ELKAALDKAFATRGRFQLI 536 (565)
T ss_dssp HHHHHHHHHHHCCSSCEEE
T ss_pred HHHHHHHHHHhcCCCeEEE
Confidence 9999999999888998 55
No 165
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=28.35 E-value=17 Score=29.03 Aligned_cols=36 Identities=19% Similarity=0.199 Sum_probs=26.1
Q ss_pred CCcEEEEEechhHHH-HHHHHHHHHhcCCCeeEEEec
Q 018167 238 GSDITLVGWGAQLSI-MEQACLDAEKEGISCELIDLK 273 (360)
Q Consensus 238 G~dv~Iia~G~~~~~-al~Aa~~L~~~Gi~v~Vi~~~ 273 (360)
.-|++||++|..... --+..+.|++.||.+++.|-+
T Consensus 68 ~pevliiGtG~~~~~l~p~~~~~l~~~GI~vE~m~T~ 104 (128)
T 2fi9_A 68 QIEVLLIGTGVELLRLPEELRVLLWEKRISSDTMSTG 104 (128)
T ss_dssp GCSEEEEECTTSCCCCCHHHHHHHHHTTCEEEEECHH
T ss_pred CCCEEEECCCCCCCCCCHHHHHHHHHcCCEEEEeCHH
Confidence 379999999986422 234456788889999988753
No 166
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=28.04 E-value=17 Score=29.38 Aligned_cols=36 Identities=19% Similarity=0.159 Sum_probs=25.8
Q ss_pred CCcEEEEEechhHHH-HHHHHHHHHhcCCCeeEEEec
Q 018167 238 GSDITLVGWGAQLSI-MEQACLDAEKEGISCELIDLK 273 (360)
Q Consensus 238 G~dv~Iia~G~~~~~-al~Aa~~L~~~Gi~v~Vi~~~ 273 (360)
.-|++||++|..... --+..+.|++.||.+++.|-+
T Consensus 67 ~pevliiGTG~~~~~l~p~l~~~l~~~GI~vE~M~T~ 103 (135)
T 2fvt_A 67 AIDTLIVGTGADVWIAPRQLREALRGVNVVLDTMQTG 103 (135)
T ss_dssp SCSEEEEECTTSCCCCCHHHHHHHHTTTCEEEEECHH
T ss_pred CCCEEEEcCCCCCCcCCHHHHHHHHHcCCEEEEeCHH
Confidence 379999999975422 223456788889999888754
No 167
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=28.00 E-value=78 Score=26.04 Aligned_cols=30 Identities=13% Similarity=0.206 Sum_probs=23.9
Q ss_pred echhHHHHHHHHHHHHh-cCCCeeEEEeccc
Q 018167 246 WGAQLSIMEQACLDAEK-EGISCELIDLKTL 275 (360)
Q Consensus 246 ~G~~~~~al~Aa~~L~~-~Gi~v~Vi~~~~i 275 (360)
+|++-..|..+++.|++ .|++++++|+...
T Consensus 12 ~g~t~~la~~i~~~l~~~~g~~v~~~~l~~~ 42 (198)
T 3b6i_A 12 YGHIETMARAVAEGASKVDGAEVVVKRVPET 42 (198)
T ss_dssp SSHHHHHHHHHHHHHHTSTTCEEEEEECCCC
T ss_pred CcHHHHHHHHHHHHHhhcCCCEEEEEEcccc
Confidence 46666777777888887 8999999999865
No 168
>2gm2_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Xanthomonas campestris PV}
Probab=27.80 E-value=17 Score=29.35 Aligned_cols=39 Identities=15% Similarity=0.213 Sum_probs=27.9
Q ss_pred eeeCCcEEEEEechhHHH-HHHHHHHHHhcCCCeeEEEec
Q 018167 235 IREGSDITLVGWGAQLSI-MEQACLDAEKEGISCELIDLK 273 (360)
Q Consensus 235 l~~G~dv~Iia~G~~~~~-al~Aa~~L~~~Gi~v~Vi~~~ 273 (360)
+..+-|++||++|..... --+..+.|++.||.+++.|-+
T Consensus 61 l~~~pevliiGTG~~~~~l~p~~~~~l~~~GI~vE~m~T~ 100 (132)
T 2gm2_A 61 LALNPAVILLGTGERQQFPSTDVLAACLTRGIGLEAMTNA 100 (132)
T ss_dssp HHHCCSEEEEECTTSCCCCCHHHHHHHHHHTCEEEEECHH
T ss_pred HhcCCCEEEECCCCCCCcCCHHHHHHHHHcCCEEEEeCHH
Confidence 445689999999986432 233456788889999988754
No 169
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=27.51 E-value=1.1e+02 Score=31.47 Aligned_cols=85 Identities=8% Similarity=-0.010 Sum_probs=47.5
Q ss_pred eEEEecCcccH-H--HHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCC-C-chHH-HHHcCCCCcEEEeeC
Q 018167 112 AIAEIQFADYI-F--PAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-S-QSPE-AFFCHVPGLKVVIPR 185 (360)
Q Consensus 112 p~~~~~f~~F~-~--ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~H-s-~~d~-a~~r~iPn~~V~~P~ 185 (360)
.++++ ..+=. + .+++.+. .++..++ +. .+++....+.. -++.+. + .+|+ ..+++. |+.++.+.
T Consensus 150 ~vv~i-~GDG~~~eG~~~Eal~-~A~~~~L------~~-li~i~~nN~~~-i~~~~~~~~~~d~~~~~~a~-G~~~~~~v 218 (680)
T 1gpu_A 150 YTYVF-LGDGCLQEGISSEASS-LAGHLKL------GN-LIAIYDDNKIT-IDGATSISFDEDVAKRYEAY-GWEVLYVE 218 (680)
T ss_dssp CEEEE-ECHHHHHSHHHHHHHH-HHHHTTC------TT-EEEEEEECSEE-TTEEGGGTCCCCHHHHHHHH-TCEEEEES
T ss_pred eEEEE-ECCCccchhhHHHHHH-HHHHhCC------Cc-EEEEEECCCce-EecccccccCccHHHHHHhc-CCeEEEEe
Confidence 44443 55532 3 4566655 4665553 43 34444444322 122222 1 2343 345554 78877343
Q ss_pred ----CHHHHHHHHHHhHh-CCCCEEEe
Q 018167 186 ----SPRQAKGLLLSCIR-DPNPVVFF 207 (360)
Q Consensus 186 ----d~~e~~~~l~~a~~-~~~P~~i~ 207 (360)
|..++..+++.|.+ .++|++|.
T Consensus 219 dG~~d~~~l~~al~~A~~~~~~P~lI~ 245 (680)
T 1gpu_A 219 NGNEDLAGIAKAIAQAKLSKDKPTLIK 245 (680)
T ss_dssp CTTTCHHHHHHHHHHHHHCTTSCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHCCCCCEEEE
Confidence 78899999999887 58999884
No 170
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=27.43 E-value=1.9e+02 Score=29.08 Aligned_cols=25 Identities=12% Similarity=0.072 Sum_probs=21.4
Q ss_pred eeCCHHHHHHHHHHhHhCCCCEEEe
Q 018167 183 IPRSPRQAKGLLLSCIRDPNPVVFF 207 (360)
Q Consensus 183 ~P~d~~e~~~~l~~a~~~~~P~~i~ 207 (360)
...|..++..+++.|.+.++|++|.
T Consensus 260 dG~d~~~l~~al~~A~~~~~P~lI~ 284 (629)
T 2o1x_A 260 DGHNVQELVWLLERLVDLDGPTILH 284 (629)
T ss_dssp ESSCHHHHHHHHHHHTTSSSEEEEE
T ss_pred CCcCHHHHHHHHHHHHhcCCCEEEE
Confidence 4458999999999998889999884
No 171
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=27.29 E-value=2.3e+02 Score=22.37 Aligned_cols=109 Identities=9% Similarity=0.087 Sum_probs=61.0
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCc--HHHHHHHHhcC--CeEEEEeCCCcCCchHHHHHHHHHH
Q 018167 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWD--KETVEASVRKT--GRLLISHEAPVTGGFGAEISASILE 315 (360)
Q Consensus 240 dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d--~~~l~~~~~~~--~~ivvvEe~~~~GGlgs~v~~~l~~ 315 (360)
.++|++.|......+++++.+--.--.+..+++..=...+ .+.+.+.+++. +.++++=| ..||-=..++..+..
T Consensus 7 ~iiivsHG~~A~gl~~~~~~i~G~~~~i~ai~~~~~~~~~~~~~~i~~~i~~~~~~gvliLtD--l~GGSp~n~a~~~~~ 84 (142)
T 3bed_A 7 KLILMSHGRMAEETLASTQMIVGELADAAIVSMTAEDGLSGTQAKLAAILKEAGNVPTLVLAD--LXGGTPCNVAMMAMG 84 (142)
T ss_dssp EEEEEEETTHHHHHHHHHHHHHCTTCCCEEEEECTTTHHHHHHHHHHHHHHHHCSCCEEEEES--STTSHHHHHHHHHTT
T ss_pred cEEEEcChHHHHHHHHHHHHHcCCCCCEEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEEEE--CCCCHHHHHHHHHhc
Confidence 5889999998888888888875322467778776422221 12344444432 45666655 346543334433332
Q ss_pred hccccCCCceEEEecCCCCcc-ccccccCCCCHHHHHHHHHH
Q 018167 316 RCFLRLEAPVARVCGLDTPFP-LVFEPFYMPTKNKILDAIKS 356 (360)
Q Consensus 316 ~~~~~l~~~~~~i~~~~~~~~-~~~e~~gl~~~~~I~~~i~~ 356 (360)
. ..++.-+.|.+-|.- ......+. +.+.+++.+.+
T Consensus 85 ~-----~~~v~vi~GvNlpmlle~~~~~~~-~l~el~~~~~~ 120 (142)
T 3bed_A 85 T-----YPQLRVVAGLNLAMAIEAAVSPVE-NVDELAAYLTQ 120 (142)
T ss_dssp T-----CTTEEEEESCCHHHHHHHHHCCCC-CHHHHHHHHHH
T ss_pred c-----CCCEEEEeCCCHHHHHHHHHccCC-CHHHHHHHHHH
Confidence 1 236777777775421 11111355 67777766654
No 172
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=26.97 E-value=1.1e+02 Score=25.72 Aligned_cols=58 Identities=10% Similarity=0.133 Sum_probs=35.8
Q ss_pred EEEEEechh---HHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhc-----CCeEEEEeCCC
Q 018167 241 ITLVGWGAQ---LSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRK-----TGRLLISHEAP 300 (360)
Q Consensus 241 v~Iia~G~~---~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~-----~~~ivvvEe~~ 300 (360)
++|+.+|.. -....++++.++++|+.+.+|.+-+-.. +.+ +...+++ ...++++-++.
T Consensus 109 iiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~-~~~-l~~la~~~n~~~~s~~~~~~~~~ 174 (192)
T 2x5n_A 109 IVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQN-ESA-LQHFIDAANSSDSCHLVSIPPSP 174 (192)
T ss_dssp EEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC----CH-HHHHHHHHCSTTCCEEEEECCCS
T ss_pred EEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCc-cHH-HHHHHHhccCCCceEEEEecCcc
Confidence 444444432 4567788999999999999999987543 223 4444433 24667776654
No 173
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=26.95 E-value=85 Score=23.15 Aligned_cols=68 Identities=18% Similarity=0.153 Sum_probs=40.8
Q ss_pred CcEEEEEec----hhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHh-cCCeEEEEeCCCcCCchHHH
Q 018167 239 SDITLVGWG----AQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR-KTGRLLISHEAPVTGGFGAE 308 (360)
Q Consensus 239 ~dv~Iia~G----~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~-~~~~ivvvEe~~~~GGlgs~ 308 (360)
..++|.+.| +.-..|.+|.+.|++.|++...+|+.. .|--.+.+.+... .+-..|++ ++...||+-..
T Consensus 17 ~~vvvf~~g~~~~~~C~~C~~~~~~L~~~~i~~~~vdi~~-~~~~~~~l~~~~g~~~vP~v~i-~g~~igg~d~~ 89 (105)
T 2yan_A 17 ASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILE-DEEVRQGLKAYSNWPTYPQLYV-KGELVGGLDIV 89 (105)
T ss_dssp SSEEEEESBCSSSBCTTHHHHHHHHHHHHTCCCEEEEGGG-CHHHHHHHHHHHTCCSSCEEEE-TTEEEECHHHH
T ss_pred CCEEEEEecCCCCCCCccHHHHHHHHHHCCCCeEEEECCC-CHHHHHHHHHHHCCCCCCeEEE-CCEEEeChHHH
Confidence 357777665 344678888888988899999999876 2211122333222 22234555 45567887653
No 174
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=26.88 E-value=2.2e+02 Score=22.00 Aligned_cols=101 Identities=12% Similarity=0.010 Sum_probs=55.1
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHHhccc
Q 018167 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFL 319 (360)
Q Consensus 240 dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~~~~~ 319 (360)
.++|++.|.......+.++ +.|+ ++.. ..++.+.+.+.++..+ +++. .+..-|+|-.+.+.++-
T Consensus 34 ~l~i~G~g~~~~~~~~~~~---~~~~-----~v~~-g~~~~~~~~~~~~~ad-v~v~--ps~~e~~~~~~~Eama~---- 97 (166)
T 3qhp_A 34 VLLLKGKGPDEKKIKLLAQ---KLGV-----KAEF-GFVNSNELLEILKTCT-LYVH--AANVESEAIACLEAISV---- 97 (166)
T ss_dssp EEEEECCSTTHHHHHHHHH---HHTC-----EEEC-CCCCHHHHHHHHTTCS-EEEE--CCCSCCCCHHHHHHHHT----
T ss_pred EEEEEeCCccHHHHHHHHH---HcCC-----eEEE-eecCHHHHHHHHHhCC-EEEE--CCcccCccHHHHHHHhc----
Confidence 4666666665544444333 3355 2333 5566777888887776 4444 22346778888887753
Q ss_pred cCCC-ceEEEecCCCCccccccc----cCCCCHHHHHHHHHHhhh
Q 018167 320 RLEA-PVARVCGLDTPFPLVFEP----FYMPTKNKILDAIKSTVN 359 (360)
Q Consensus 320 ~l~~-~~~~i~~~~~~~~~~~e~----~gl~~~~~I~~~i~~~l~ 359 (360)
.. |+..- ......+++.+. +---|++++.+++.++++
T Consensus 98 --G~vPvi~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~ 139 (166)
T 3qhp_A 98 --GIVPVIAN-SPLSATRQFALDERSLFEPNNAKDLSAKIDWWLE 139 (166)
T ss_dssp --TCCEEEEC-CTTCGGGGGCSSGGGEECTTCHHHHHHHHHHHHH
T ss_pred --CCCcEEee-CCCCchhhhccCCceEEcCCCHHHHHHHHHHHHh
Confidence 33 65431 111112222111 111278899999988764
No 175
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=26.61 E-value=36 Score=27.98 Aligned_cols=36 Identities=8% Similarity=0.064 Sum_probs=21.1
Q ss_pred HHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeCC
Q 018167 256 ACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEA 299 (360)
Q Consensus 256 Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe~ 299 (360)
|.+.|++.||++. -..+ +++.+. +.....||++++.
T Consensus 62 a~~~l~~~Gid~s-~~ar---~l~~~~----~~~~DlIl~M~~~ 97 (161)
T 1d1q_A 62 TVSICKQHGVKIN-HKGK---QIKTKH----FDEYDYIIGMDES 97 (161)
T ss_dssp HHHHHHHTTCCCC-CCBC---BCCGGG----GGTCSEEEESSHH
T ss_pred HHHHHHHcCcCCC-ceEe---ECCHHH----HhhCCEEEEeCHH
Confidence 4445667788876 3344 444332 3456788888764
No 176
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=26.60 E-value=1.4e+02 Score=30.44 Aligned_cols=37 Identities=8% Similarity=0.130 Sum_probs=28.2
Q ss_pred HHHcCCCCcEEEeeC----CHHHHHHHHHHhHh-CCCCEEEec
Q 018167 171 AFFCHVPGLKVVIPR----SPRQAKGLLLSCIR-DPNPVVFFE 208 (360)
Q Consensus 171 a~~r~iPn~~V~~P~----d~~e~~~~l~~a~~-~~~P~~i~~ 208 (360)
..+++. |+.++.+. |..++..+++.|.+ .++|++|..
T Consensus 216 ~~~~a~-G~~~~~~vdG~~d~~~l~~al~~a~~~~~~P~lI~~ 257 (675)
T 1itz_A 216 TRFEAL-GWHTIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIKV 257 (675)
T ss_dssp HHHHHT-TCEEEEESCTTTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred HHHHhC-CCEEEEEecCCCCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 456665 88887443 78899999999887 589998853
No 177
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=26.52 E-value=3.3e+02 Score=23.93 Aligned_cols=102 Identities=7% Similarity=0.015 Sum_probs=57.8
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeCCCc----------CCchHH
Q 018167 238 GSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPV----------TGGFGA 307 (360)
Q Consensus 238 G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe~~~----------~GGlgs 307 (360)
+-.+.|++.|.......+.++.+. - ++..+-..+.+.+.+.++..+- +++= +. .-|++-
T Consensus 188 ~~~l~i~G~g~~~~~l~~~~~~~~---~-----~v~~~g~~~~~~l~~~~~~adv-~v~p--s~~~~~~~~~~~~E~~~~ 256 (342)
T 2iuy_A 188 GRRLVLAGPAWEPEYFDEITRRYG---S-----TVEPIGEVGGERRLDLLASAHA-VLAM--SQAVTGPWGGIWCEPGAT 256 (342)
T ss_dssp TCCEEEESCCCCHHHHHHHHHHHT---T-----TEEECCCCCHHHHHHHHHHCSE-EEEC--CCCCCCTTCSCCCCCCCH
T ss_pred CcEEEEEeCcccHHHHHHHHHHhC---C-----CEEEeccCCHHHHHHHHHhCCE-EEEC--CcccccccccccccCccH
Confidence 345677776664444444444432 1 2334556677777777777664 3332 22 467888
Q ss_pred HHHHHHHHhccccCCCceEEEecCCCCccccccc----cCC--C-CHHHHHHHHHHhh
Q 018167 308 EISASILERCFLRLEAPVARVCGLDTPFPLVFEP----FYM--P-TKNKILDAIKSTV 358 (360)
Q Consensus 308 ~v~~~l~~~~~~~l~~~~~~i~~~~~~~~~~~e~----~gl--~-~~~~I~~~i~~~l 358 (360)
.+.|.++- ..|+.. ......+++.++ .|+ + |++++.+++.+++
T Consensus 257 ~~~EAma~------G~PvI~--s~~~~~~e~~~~~~~~~g~~~~~d~~~l~~~i~~l~ 306 (342)
T 2iuy_A 257 VVSEAAVS------GTPVVG--TGNGCLAEIVPSVGEVVGYGTDFAPDEARRTLAGLP 306 (342)
T ss_dssp HHHHHHHT------TCCEEE--CCTTTHHHHGGGGEEECCSSSCCCHHHHHHHHHTSC
T ss_pred HHHHHHhc------CCCEEE--cCCCChHHHhcccCCCceEEcCCCHHHHHHHHHHHH
Confidence 88888753 346542 222234444433 343 3 7889999888765
No 178
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=26.37 E-value=1.3e+02 Score=30.63 Aligned_cols=86 Identities=8% Similarity=-0.040 Sum_probs=48.5
Q ss_pred eeEEEecCcccH-H--HHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCC--CchHH-HHHcCCCCcEEEee
Q 018167 111 RAIAEIQFADYI-F--PAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH--SQSPE-AFFCHVPGLKVVIP 184 (360)
Q Consensus 111 ~p~~~~~f~~F~-~--ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~H--s~~d~-a~~r~iPn~~V~~P 184 (360)
+.++++ ..+=. + .+++-+. .++..++ +. .+++....+.. -++++. ..+|+ ..+++. |+.++.+
T Consensus 151 ~~v~~~-~GDG~~~eG~~~Eal~-~A~~~~L------~~-li~i~~nN~~~-i~~~~~~~~~~d~~~~~~a~-G~~~~~~ 219 (651)
T 2e6k_A 151 HYTYVL-ASDGDLMEGVSGEAAS-LAGHWGL------SK-LIVFWDDNRIS-IDGPTDLAFTEDVLARYRAY-GWQTLRV 219 (651)
T ss_dssp CCEEEE-ECHHHHHSHHHHHHHH-HHHHTTC------TT-EEEEEEECCEE-TTEEGGGTCCSCHHHHHHHT-TCEEEEE
T ss_pred CEEEEE-EChhhhchhHHHHHHH-HHHHcCC------Ce-EEEEEECCCcc-cccccccccCccHHHHHHhC-CCeEEEE
Confidence 344443 55532 3 4566655 4665553 33 34444444322 122211 12344 455554 8888744
Q ss_pred C---CHHHHHHHHHHhHhCCCCEEEe
Q 018167 185 R---SPRQAKGLLLSCIRDPNPVVFF 207 (360)
Q Consensus 185 ~---d~~e~~~~l~~a~~~~~P~~i~ 207 (360)
. |..++..+++.|.+.++|++|.
T Consensus 220 vdG~d~~~l~~al~~a~~~~~P~lI~ 245 (651)
T 2e6k_A 220 EDVNDLEALRKAIKLAKLDERPTLIA 245 (651)
T ss_dssp SCTTCHHHHHHHHHHHHHSSSCEEEE
T ss_pred eCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 3 7899999999998888999884
No 179
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.20 E-value=1.2e+02 Score=22.80 Aligned_cols=62 Identities=11% Similarity=0.129 Sum_probs=37.9
Q ss_pred cEEEEEechhHHHHH------HHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhc------------CCeEEEEeCCCc
Q 018167 240 DITLVGWGAQLSIME------QACLDAEKEGISCELIDLKTLIPWDKETVEASVRK------------TGRLLISHEAPV 301 (360)
Q Consensus 240 dv~Iia~G~~~~~al------~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~------------~~~ivvvEe~~~ 301 (360)
.|+|.++-.. ..|. +|.+.|++.|++.+.+|+.. |.+...+.... +-..|++.+. .
T Consensus 9 ~V~vy~~~~C-~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~----~~~~~~~l~~~~~~~~~~~~g~~tvP~vfi~g~-~ 82 (111)
T 2ct6_A 9 VIRVFIASSS-GFVAIKKKQQDVVRFLEANKIEFEEVDITM----SEEQRQWMYKNVPPEKKPTQGNPLPPQIFNGDR-Y 82 (111)
T ss_dssp CEEEEECSSC-SCHHHHHHHHHHHHHHHHTTCCEEEEETTT----CHHHHHHHHHSCCTTTCCSSSSCCSCEEEETTE-E
T ss_pred EEEEEEcCCC-CCcccchhHHHHHHHHHHcCCCEEEEECCC----CHHHHHHHHHHhcccccccCCCCCCCEEEECCE-E
Confidence 4666665432 3344 78888889999999999986 33332222222 1245667654 5
Q ss_pred CCchHH
Q 018167 302 TGGFGA 307 (360)
Q Consensus 302 ~GGlgs 307 (360)
.||+-.
T Consensus 83 iGG~d~ 88 (111)
T 2ct6_A 83 CGDYDS 88 (111)
T ss_dssp EEEHHH
T ss_pred EeCHHH
Confidence 688755
No 180
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=25.98 E-value=86 Score=22.15 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=27.5
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccC
Q 018167 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIP 277 (360)
Q Consensus 240 dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP 277 (360)
+++|.+. +.-..|.++...|++.|++.+.+|+....+
T Consensus 13 ~v~ly~~-~~Cp~C~~~~~~L~~~gi~~~~~~v~~~~~ 49 (92)
T 3ic4_A 13 EVLMYGL-STCPHCKRTLEFLKREGVDFEVIWIDKLEG 49 (92)
T ss_dssp SSEEEEC-TTCHHHHHHHHHHHHHTCCCEEEEGGGCCH
T ss_pred eEEEEEC-CCChHHHHHHHHHHHcCCCcEEEEeeeCCc
Confidence 4666553 335678888888888899999999886544
No 181
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=25.73 E-value=1.5e+02 Score=25.94 Aligned_cols=85 Identities=20% Similarity=0.303 Sum_probs=55.2
Q ss_pred CCcEEEEEechhH-HHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcC---Ce--EEEEeCCCcCCchHHHHHH
Q 018167 238 GSDITLVGWGAQL-SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKT---GR--LLISHEAPVTGGFGAEISA 311 (360)
Q Consensus 238 G~dv~Iia~G~~~-~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~---~~--ivvvEe~~~~GGlgs~v~~ 311 (360)
|+.+.|++-|..+ .-|+-|..+-...+|.=+=|++.|+--.-++.|.+.++.. .+ ++++ -++..||-=++-..
T Consensus 87 gkrvii~gggaqv~qva~gai~eadrhnirgerisvdt~p~vge~~l~~av~av~~lpr~~~lvl-ags~mgg~i~~~v~ 165 (223)
T 1y7p_A 87 GKRVIILGGGALVSQVAIGAISEADRHNLRGERISVDTMPVVGEEEIAEAVKAVSRLHRAEVLVL-AGGIMGGKITEEVK 165 (223)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHHHHHHHTSCCEEEEEEECCSHHHHHHHHHHGGGSTTEEEEEE-ESSBCCTHHHHHHH
T ss_pred CcEEEEECCcHHHHHHHHhhcchhhhcccccceeeeecceecCHHHHHHHHHHHhhccccceeeE-ecccccchHHHHHH
Confidence 5678899999876 4566666665555666677778887777888887776643 33 3444 45678886554444
Q ss_pred HHHHhccccCCCceEEE
Q 018167 312 SILERCFLRLEAPVARV 328 (360)
Q Consensus 312 ~l~~~~~~~l~~~~~~i 328 (360)
.+.++ ..|+..+
T Consensus 166 ~~~~~-----~i~vi~l 177 (223)
T 1y7p_A 166 KLRKS-----GIRVISL 177 (223)
T ss_dssp HHGGG-----TCEEEEE
T ss_pred HHHHC-----CCeEEEe
Confidence 45444 3566655
No 182
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=25.70 E-value=49 Score=32.04 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=26.9
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEec
Q 018167 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (360)
Q Consensus 237 ~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~ 273 (360)
.+.+|+||+.|.. .+.||..|.+.|.++.|++-.
T Consensus 121 ~~~~V~IIGgGpA---Gl~aA~~L~~~G~~V~v~e~~ 154 (456)
T 2vdc_G 121 LGLSVGVIGAGPA---GLAAAEELRAKGYEVHVYDRY 154 (456)
T ss_dssp CCCCEEEECCSHH---HHHHHHHHHHHTCCEEEECSS
T ss_pred CCCEEEEECCCHH---HHHHHHHHHHCCCeEEEEecc
Confidence 4678999999974 445667777789999999864
No 183
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=25.59 E-value=2.8e+02 Score=22.69 Aligned_cols=109 Identities=13% Similarity=0.101 Sum_probs=62.5
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcH-HHHHHHHhc---CCeEEEEeCCCcCCchHHHHHHHHH
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDK-ETVEASVRK---TGRLLISHEAPVTGGFGAEISASIL 314 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~-~~l~~~~~~---~~~ivvvEe~~~~GGlgs~v~~~l~ 314 (360)
..++|+|.|......+++++.+--+--.+..|++..=.|-+. +.+.+.+++ .+.++++-| ..||--..++..+.
T Consensus 22 ~~iII~sHG~~A~gl~~s~~~i~G~~~~v~av~~~~~~~~~~~~~~~~~i~~~~~~~gVLiLtD--l~GGSP~n~a~~~~ 99 (159)
T 3mtq_A 22 RHYIFASHGSFANGLLNSVELILGKQPDIHTLCAYVEEEVDLTQQVEALVARFPAQDELIVITD--IFAGSVNNEFVRFL 99 (159)
T ss_dssp EEEEEEEETTHHHHHHHHHHHHHCCCTTEEEEEETSCSSSCHHHHHHHHHHTSCTTSEEEEEES--CTTSHHHHHHHGGG
T ss_pred ceEEEEeCcHHHHHHHHHHHHHcCCCCCeEEEECCCCCHHHHHHHHHHHHHhcCCCCCEEEEEe--CCCCCHHHHHHHHh
Confidence 468899999988888899997753323678888754233122 345566655 356766655 34654343433232
Q ss_pred HhccccCCCceEEEecCCCCc--cccccccCCCCHHHHHHHHHH
Q 018167 315 ERCFLRLEAPVARVCGLDTPF--PLVFEPFYMPTKNKILDAIKS 356 (360)
Q Consensus 315 ~~~~~~l~~~~~~i~~~~~~~--~~~~e~~gl~~~~~I~~~i~~ 356 (360)
+ ..++.-|.|.+-|- ......... +.+.+++.+.+
T Consensus 100 ~------~~~v~vItGvNLpMlle~~~~~~~~-~l~el~~~~i~ 136 (159)
T 3mtq_A 100 S------RPHFHLLSGLNLPLIIDLLISAAED-NTEKLITEALT 136 (159)
T ss_dssp G------STTEEEEECCCHHHHHHHHHTTTCC-CHHHHHHHHHH
T ss_pred c------CCCeEEEeCCCHHHHHHHHHhhcCC-CHHHHHHHHHH
Confidence 2 24577777777542 111222334 66666665544
No 184
>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans}
Probab=25.58 E-value=1.5e+02 Score=28.10 Aligned_cols=56 Identities=9% Similarity=0.048 Sum_probs=38.2
Q ss_pred cEEEEEechh-HHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeCCCc
Q 018167 240 DITLVGWGAQ-LSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPV 301 (360)
Q Consensus 240 dv~Iia~G~~-~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe~~~ 301 (360)
++. |.+|.. ...|++.+++|+++|+.|++..+...+ +. ...-+..+.++.+.+...
T Consensus 338 ~v~-v~~~~~~~~~a~~~a~~LR~~G~~v~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~ 394 (400)
T 3od1_A 338 QTC-ILFSNERRFEAIELARKKRANGEAVVLQDLAGVT----DV-DAMSSNYQDVIYCIGTAG 394 (400)
T ss_dssp CEE-EEECGGGHHHHHHHHHHHHTTTCCEEEEEGGGCS----CH-HHHHTTSSEEEEECSCC-
T ss_pred eEE-EEECcHHHHHHHHHHHHHHHCCCEEEEEecCChh----HH-HHHHcCCCEEEEEecCCC
Confidence 455 457654 678999999999999999998776642 11 223345678888866543
No 185
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=25.48 E-value=2.6e+02 Score=22.39 Aligned_cols=114 Identities=11% Similarity=0.099 Sum_probs=62.2
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcH--HHHHHHHhc---CCeEEEEeCCCcCCchHHHHHHHHH
Q 018167 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDK--ETVEASVRK---TGRLLISHEAPVTGGFGAEISASIL 314 (360)
Q Consensus 240 dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~--~~l~~~~~~---~~~ivvvEe~~~~GGlgs~v~~~l~ 314 (360)
.++|++.|......+++++.+--+--.+..+++..=...+. +.+.+.+++ .+.++++-+ ..||--..++..+.
T Consensus 3 giii~sHg~~A~gl~~~~~~i~G~~~~i~av~~~~~~~~~~~~~~i~~~i~~~~~~~gvlvLtD--l~GGSp~n~a~~~~ 80 (150)
T 3ipr_A 3 GIVIATHGALSDGAKDAATVIMGATENIETVNLNSGDDVQALGGQIKTAIENVQQGDGVLVMVD--LLSASPYNQAVLVI 80 (150)
T ss_dssp EEEEEEETTHHHHHHHHHHHHHSCCCSEEEEEECTTCCHHHHHHHHHHHHHHHCSSSCEEEEES--STTSHHHHHHHHHH
T ss_pred EEEEEECcHHHHHHHHHHHHHcCCCCCEEEEEecCCCCHHHHHHHHHHHHHhcCCCCCEEEEEe--CCCCCHHHHHHHHH
Confidence 47899999988888899888753334677788764333221 334444443 345666655 35765555555444
Q ss_pred HhccccCCCceEEEecCCCCc--ccc-ccccCCCCHHHHHHHHHH
Q 018167 315 ERCFLRLEAPVARVCGLDTPF--PLV-FEPFYMPTKNKILDAIKS 356 (360)
Q Consensus 315 ~~~~~~l~~~~~~i~~~~~~~--~~~-~e~~gl~~~~~I~~~i~~ 356 (360)
...-.....++.-+.|.+-|- ... ....+. +.+.+++.+.+
T Consensus 81 ~~~~~~~~~~v~vI~GvNLpmlle~~~~r~~~~-~l~el~~~~~~ 124 (150)
T 3ipr_A 81 NELEPALQKKIFVVSGTNLPMVLEAINHQLLGT-PIAEAAQAIVA 124 (150)
T ss_dssp TTSCHHHHTTEEEEESCCHHHHHHHHHHHHHTC-CHHHHHHHHHH
T ss_pred HhhhhccCCCEEEEeCCCHHHHHHHHHhhhcCC-CHHHHHHHHHH
Confidence 320000013577777777542 111 222234 55666655543
No 186
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=25.45 E-value=48 Score=31.84 Aligned_cols=31 Identities=19% Similarity=0.222 Sum_probs=24.8
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEe
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~ 272 (360)
++|+||+.|. .-|.||..|.+.|.+|.|+.-
T Consensus 2 k~VvVIGaG~---~GL~aA~~La~~G~~V~VlEa 32 (501)
T 4dgk_A 2 KPTTVIGAGF---GGLALAIRLQAAGIPVLLLEQ 32 (501)
T ss_dssp CCEEEECCHH---HHHHHHHHHHHTTCCEEEECC
T ss_pred CCEEEECCcH---HHHHHHHHHHHCCCcEEEEcc
Confidence 5799999886 345577788899999999864
No 187
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=25.42 E-value=1.3e+02 Score=22.35 Aligned_cols=68 Identities=12% Similarity=0.122 Sum_probs=43.4
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhc-----CCeEEEEeCCCcCCchHHHH
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRK-----TGRLLISHEAPVTGGFGAEI 309 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~-----~~~ivvvEe~~~~GGlgs~v 309 (360)
..|++.+. +.-..|.+|.+.|++.|++.+.+|+....|-+ +.+.+.+.+ +-..+.+ ++...||+....
T Consensus 19 ~~v~vy~~-~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~-~~~~~~l~~~~g~~tvP~ifi-~g~~igG~~~~~ 91 (113)
T 3rhb_A 19 NTVVIYSK-TWCSYCTEVKTLFKRLGVQPLVVELDQLGPQG-PQLQKVLERLTGQHTVPNVFV-CGKHIGGCTDTV 91 (113)
T ss_dssp SSEEEEEC-TTCHHHHHHHHHHHHTTCCCEEEEGGGSTTHH-HHHHHHHHHHHSCCSSCEEEE-TTEEEESHHHHH
T ss_pred CCEEEEEC-CCChhHHHHHHHHHHcCCCCeEEEeecCCCCh-HHHHHHHHHHhCCCCcCEEEE-CCEEEcCcHHHH
Confidence 45777665 44578889999999999999999998754422 233333321 2234555 445678876543
No 188
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=25.21 E-value=1.5e+02 Score=27.76 Aligned_cols=57 Identities=11% Similarity=0.200 Sum_probs=37.9
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEecc---------------ccCCcHHHHHHHHhcCCeEEEEeC
Q 018167 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKT---------------LIPWDKETVEASVRKTGRLLISHE 298 (360)
Q Consensus 237 ~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~---------------ikP~d~~~l~~~~~~~~~ivvvEe 298 (360)
+++.+.|++-|.......+++ ++.|+++-++| .. ....|.+.|.+.+++.+ +++.|-
T Consensus 23 ~~~~I~ilGgG~lg~~l~~aa---~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d-~i~~e~ 94 (403)
T 3k5i_A 23 NSRKVGVLGGGQLGRMLVESA---NRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCD-VVTAEI 94 (403)
T ss_dssp SCCEEEEECCSHHHHHHHHHH---HHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCS-EEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHH---HHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCC-EEEECC
Confidence 356788999887555544444 45599999998 32 12245678888887765 667653
No 189
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=25.09 E-value=1.5e+02 Score=30.30 Aligned_cols=85 Identities=12% Similarity=0.094 Sum_probs=47.6
Q ss_pred eEEEecCcccH-H--HHHHHHHHHHHhcccccCCCccccceEEEcCCCCCCCCCCCC-C-chHH-HHHcCCCCcEEEee-
Q 018167 112 AIAEIQFADYI-F--PAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYH-S-QSPE-AFFCHVPGLKVVIP- 184 (360)
Q Consensus 112 p~~~~~f~~F~-~--ra~dQi~~~~a~~~~~~~~~~~v~~~v~~~~~g~~g~~g~~H-s-~~d~-a~~r~iPn~~V~~P- 184 (360)
.++++ ..+=. + .+++-+. .++..++ +. .+++....+.. -++++. . .+|+ ..+++. |+.++.+
T Consensus 148 ~v~~~-~GDG~~~eG~~~Eal~-~A~~~~L------~~-li~i~~nN~~~-i~~~~~~~~~~d~~~~~~a~-G~~~~~~v 216 (669)
T 2r8o_A 148 YTYAF-MGDGCMMEGISHEVCS-LAGTLKL------GK-LIAFYDDNGIS-IDGHVEGWFTDDTAMRFEAY-GWHVIRDI 216 (669)
T ss_dssp CEEEE-ECHHHHHSHHHHHHHH-HHHHTTC------TT-EEEEEEECSEE-TTEEGGGTCCCCHHHHHHHT-TCEEEEEE
T ss_pred eEEEE-ECHhHhcchHHHHHHH-HHHHcCC------Cc-EEEEEECCCcE-eccccccccCccHHHHHHHC-CCeEEeEE
Confidence 44443 55532 3 4566655 4665553 33 24444444322 122222 1 2343 455554 7777623
Q ss_pred --CCHHHHHHHHHHhHh-CCCCEEEe
Q 018167 185 --RSPRQAKGLLLSCIR-DPNPVVFF 207 (360)
Q Consensus 185 --~d~~e~~~~l~~a~~-~~~P~~i~ 207 (360)
.|..++..+++.+.+ .++|++|.
T Consensus 217 dG~d~~~l~~al~~a~~~~~~P~lI~ 242 (669)
T 2r8o_A 217 DGHDAASIKRAVEEARAVTDKPSLLM 242 (669)
T ss_dssp ETTCHHHHHHHHHHHHHCCSSCEEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence 379999999999987 58999884
No 190
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=25.07 E-value=60 Score=28.25 Aligned_cols=31 Identities=19% Similarity=0.193 Sum_probs=24.4
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEe
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~ 272 (360)
.|++||+.|.. .+.+|..|.+.|.++.||+-
T Consensus 3 ~~vvIIG~G~a---Gl~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 3 FDVIIIGGSYA---GLSAALQLGRARKNILLVDA 33 (297)
T ss_dssp EEEEEECCSHH---HHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEECCCHH---HHHHHHHHHhCCCCEEEEeC
Confidence 37899998873 34566778788999999993
No 191
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=25.06 E-value=3.2e+02 Score=24.84 Aligned_cols=72 Identities=8% Similarity=0.059 Sum_probs=41.8
Q ss_pred CCCcccHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCCcEEechhHHHHHHHHHHHHhc-CCCeeEE
Q 018167 36 SGKSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAA-MGNRAIA 114 (360)
Q Consensus 36 ~~~~~~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~r~i~~GIaE~~~vg~AaGlA~-~G~~p~~ 114 (360)
+.++....+.+-+++.++..-+|+.|-+|-- .|++ + ++ ..+.+|.=+.. .|..|+.
T Consensus 31 PPk~~~~~~~l~~~~~~l~~l~p~fvsVT~g--agg~---~-----------------r~-~t~~~a~~i~~~~g~~~v~ 87 (304)
T 3fst_A 31 PPRTSEMEQTLWNSIDRLSSLKPKFVSVTYG--ANSG---E-----------------RD-RTHSIIKGIKDRTGLEAAP 87 (304)
T ss_dssp CCCSHHHHHHHHHHHHHHHTTCCSEEEECCC--TTSS---C-----------------HH-HHHHHHHHHHHHHCCCEEE
T ss_pred CCCCccHHHHHHHHHHHHhcCCCCEEEEeeC--CCCc---c-----------------hh-HHHHHHHHHHHHhCCCeeE
Confidence 3444555666778888888889999877632 1221 1 11 23445554544 5999999
Q ss_pred EecCcccHHHHHHHHH
Q 018167 115 EIQFADYIFPAFDQIV 130 (360)
Q Consensus 115 ~~~f~~F~~ra~dQi~ 130 (360)
.++-.+.....++.+.
T Consensus 88 Hltc~~~~~~~l~~~L 103 (304)
T 3fst_A 88 HLTCIDATPDELRTIA 103 (304)
T ss_dssp EEESTTSCHHHHHHHH
T ss_pred EeecCCCCHHHHHHHH
Confidence 8744443333444443
No 192
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=25.04 E-value=1.8e+02 Score=26.50 Aligned_cols=18 Identities=11% Similarity=0.211 Sum_probs=8.0
Q ss_pred HHHHHHHhcCCeEEEEeC
Q 018167 281 ETVEASVRKTGRLLISHE 298 (360)
Q Consensus 281 ~~l~~~~~~~~~ivvvEe 298 (360)
+.|.+.+++++-++++||
T Consensus 158 ~~i~~l~~~~~~~li~De 175 (411)
T 3nnk_A 158 AELGEICRRYDALFYTDA 175 (411)
T ss_dssp TTHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHcCCEEEEEC
Confidence 344444444444444444
No 193
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=24.71 E-value=51 Score=29.16 Aligned_cols=31 Identities=13% Similarity=0.273 Sum_probs=23.4
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEe
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~ 272 (360)
-|++||+.|+.- +.||..|.+.|.++.||+-
T Consensus 5 yDvvIIG~GpAG---l~AA~~la~~g~~v~liE~ 35 (314)
T 4a5l_A 5 HDVVIIGSGPAA---HTAAIYLGRSSLKPVMYEG 35 (314)
T ss_dssp EEEEEECCSHHH---HHHHHHHHHTTCCCEEECC
T ss_pred CcEEEECCCHHH---HHHHHHHHHCCCCEEEEec
Confidence 389999999743 4455566667999999974
No 194
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=24.69 E-value=70 Score=26.94 Aligned_cols=62 Identities=10% Similarity=0.213 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhcCCCee-EEEeccccCCcH------------HHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHH
Q 018167 251 SIMEQACLDAEKEGISCE-LIDLKTLIPWDK------------ETVEASVRKTGRLLISHEAPVTGGFGAEISASI 313 (360)
Q Consensus 251 ~~al~Aa~~L~~~Gi~v~-Vi~~~~ikP~d~------------~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l 313 (360)
....+++..+.++|.+++ ++|+..+-.++. +.+.+.++..+.+|++--- ..+++-..+..++
T Consensus 21 ~~l~~~~~~~~~~g~~v~~~idL~~lP~~~~~~~~~~~~~~~~~~l~~~i~~AD~iv~~sP~-y~~~~~~~lK~~i 95 (193)
T 3svl_A 21 GMVARTLPKIAPASMEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPE-YNYSVPGGLKNAI 95 (193)
T ss_dssp HHHHHHGGGTSCTTEEEEECCCSTTCCCCCHHHHHHTCSCHHHHHHHHHHHHSSEEEEEECC-BTTBCCHHHHHHH
T ss_pred HHHHHHHHHHccCCCEEEEEEeHHHCCCCCcccccccCCCHHHHHHHHHHHHCCEEEEEecc-cCCCCCHHHHHHH
Confidence 333344333334588888 888887522222 2356677778877766432 3455555554444
No 195
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=24.66 E-value=2.4e+02 Score=23.55 Aligned_cols=66 Identities=9% Similarity=-0.005 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHHhc--CCCeeEEEeccc--cCCcH-------------------------HHHHHHHhcCCeEEEEeCC
Q 018167 249 QLSIMEQACLDAEKE--GISCELIDLKTL--IPWDK-------------------------ETVEASVRKTGRLLISHEA 299 (360)
Q Consensus 249 ~~~~al~Aa~~L~~~--Gi~v~Vi~~~~i--kP~d~-------------------------~~l~~~~~~~~~ivvvEe~ 299 (360)
....+..+++.+++. |.+++++|+... .+++. +.+.+.+...+.||+.--
T Consensus 18 t~~l~~~~~~~~~~~~~g~~v~~~dL~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~AD~iV~~~P- 96 (212)
T 3r6w_A 18 SRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTP- 96 (212)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEESSSSCCCCCCHHHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHCSEEEEEEE-
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEECCCCCCCcCCHHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHhCCEEEEEcC-
Confidence 344566677788777 899999999653 33332 234456777787776643
Q ss_pred CcCCchHHHHHHHHHH
Q 018167 300 PVTGGFGAEISASILE 315 (360)
Q Consensus 300 ~~~GGlgs~v~~~l~~ 315 (360)
...+++-+.+..++-.
T Consensus 97 ~y~~~~pa~lK~~iD~ 112 (212)
T 3r6w_A 97 MYNFSVPSGLKAWIDQ 112 (212)
T ss_dssp CBTTBCCHHHHHHHHH
T ss_pred cccccCCHHHHHHHHH
Confidence 3457787777777653
No 196
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=24.63 E-value=70 Score=25.43 Aligned_cols=33 Identities=24% Similarity=0.246 Sum_probs=24.4
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEe
Q 018167 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (360)
Q Consensus 237 ~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~ 272 (360)
.+..++|+++|.+-.. .++.|.+.|.++.++|.
T Consensus 18 ~~~~v~IiG~G~iG~~---la~~L~~~g~~V~vid~ 50 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSL---IANLASSSGHSVVVVDK 50 (155)
T ss_dssp CCCEEEEECCSHHHHH---HHHHHHHTTCEEEEEES
T ss_pred CCCcEEEECCCHHHHH---HHHHHHhCCCeEEEEEC
Confidence 4578999999886554 34566677888988875
No 197
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=24.54 E-value=90 Score=26.00 Aligned_cols=57 Identities=4% Similarity=0.000 Sum_probs=36.1
Q ss_pred EEEEEechhH----HHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhc--CCeEEEEeCC
Q 018167 241 ITLVGWGAQL----SIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRK--TGRLLISHEA 299 (360)
Q Consensus 241 v~Iia~G~~~----~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~--~~~ivvvEe~ 299 (360)
++|++-|... ....++++.|++.|+.+-.|-+-. ..|.+.|.+.+.. .++++.+++-
T Consensus 119 iillTDG~~~~~~~~~~~~~a~~l~~~gi~i~~igvG~--~~~~~~L~~iA~~~~~~~~~~~~~~ 181 (202)
T 1ijb_A 119 ALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGP--HANLKQIRLIEKQAPENKAFVLSSV 181 (202)
T ss_dssp EEEEECCCCCGGGCTTHHHHHHHHHHTTEEEEEEEEST--TSCHHHHHHHHHHCTTCCCEEESSG
T ss_pred EEEEccCCCCccchHHHHHHHHHHHHCCCEEEEEecCC--cCCHHHHHHHhCCCCcccEEEeCCH
Confidence 4455555432 246677888888887766665542 4688888777653 3567777653
No 198
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=24.52 E-value=66 Score=27.52 Aligned_cols=32 Identities=16% Similarity=0.253 Sum_probs=25.4
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEec
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~ 273 (360)
.|++||+-|. ..+++|..|.+.|.++.||+..
T Consensus 4 ~dVvVVGgG~---aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 4 YQVLIVGAGF---SGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp CSEEEECCSH---HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEECcCH---HHHHHHHHHHHCCCCEEEEecC
Confidence 5899999887 3456667777789999999864
No 199
>1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.44.1.1
Probab=24.44 E-value=83 Score=24.48 Aligned_cols=80 Identities=13% Similarity=0.084 Sum_probs=43.0
Q ss_pred HHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHHhccccCCCceEEEecCCCCc
Q 018167 256 ACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAPVARVCGLDTPF 335 (360)
Q Consensus 256 Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~~~~i~~~~~~~ 335 (360)
|.+.|++.||+ .--..+.+.+.+ ......||+++++ .... . +.+ ....... ..++|+
T Consensus 44 a~~~l~e~Gid-s~~~sr~l~~~~-------~~~~D~Ii~m~~~-~~~p-----------~-~~~-~~~~~~~-~i~DP~ 100 (124)
T 1y1l_A 44 VKRLLAERGLK-AKEKPRTVDEVN-------LDDFDLIVTVCEE-SSCV-----------V-LPT-DKPVTRW-HIENPA 100 (124)
T ss_dssp HHHHHHTTTCC-CCSSCCBGGGSC-------GGGCSCEEEEECS-SCCB-----------C-CSC-SSCEEEE-ECCCCT
T ss_pred HHHHHHHcCcC-CCCccccCChhH-------hcCCCEEEEecCc-ccCc-----------C-CCC-Ceeecce-ecCCCC
Confidence 34456678998 544444444443 3357889999875 1110 0 000 1122333 456676
Q ss_pred cccccccCCCCHHHHHHHHHHhhh
Q 018167 336 PLVFEPFYMPTKNKILDAIKSTVN 359 (360)
Q Consensus 336 ~~~~e~~gl~~~~~I~~~i~~~l~ 359 (360)
..-++.|.- ..+.|.+++.++++
T Consensus 101 ~~~~~~f~~-~~~~i~~~v~~ll~ 123 (124)
T 1y1l_A 101 GKDEGTYRR-VLAEIEERVKKLVG 123 (124)
T ss_dssp TTCTTHHHH-HHHHHHHHHHHHTT
T ss_pred CCCHHHHHH-HHHHHHHHHHHHHh
Confidence 533444444 56777777777764
No 200
>3iab_B Ribonucleases P/MRP protein subunit POP7; RNAse P, ribonuclease P, ribonuclease MRP, POP6, POP6P, POP7, POP7P, NME1, yeast, tRNA; 2.70A {Saccharomyces cerevisiae}
Probab=24.38 E-value=1e+02 Score=25.01 Aligned_cols=31 Identities=13% Similarity=0.144 Sum_probs=26.5
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhc-CCCee
Q 018167 238 GSDITLVGWGAQLSIMEQACLDAEKE-GISCE 268 (360)
Q Consensus 238 G~dv~Iia~G~~~~~al~Aa~~L~~~-Gi~v~ 268 (360)
.+.|+|.++|..+..|+..+-.++++ ++.++
T Consensus 60 ~~eV~v~GmGkAIeKal~lAl~fq~~~~~~V~ 91 (140)
T 3iab_B 60 SSYVAVLGMGKAVEKTLALGCHFQDQKNKKIE 91 (140)
T ss_dssp CSEEEEEEEGGGHHHHHHHHHHHHHTTCCCEE
T ss_pred CcEEEEEechHHHHHHHHHHHHHhhcCCEEEE
Confidence 37899999999999999999999876 56654
No 201
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=24.32 E-value=44 Score=31.07 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=26.0
Q ss_pred eeCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccc
Q 018167 236 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTL 275 (360)
Q Consensus 236 ~~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~i 275 (360)
..|+|++||+.|.. .+.||..|++.| ++.||+-...
T Consensus 6 ~~~~~vvIIGgG~A---Gl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 6 HHGSKVVIVGNGPG---GFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp ---CEEEEECCSHH---HHHHHHHHTTTS-EEEEECSSSS
T ss_pred cCCCcEEEECCcHH---HHHHHHHHhhcC-CEEEEECCCC
Confidence 35899999999974 445667777789 9999986653
No 202
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=24.13 E-value=36 Score=29.53 Aligned_cols=33 Identities=15% Similarity=0.091 Sum_probs=23.3
Q ss_pred CCcEEEEEechhHHH--HHHHHHHHHhcCCCeeEE
Q 018167 238 GSDITLVGWGAQLSI--MEQACLDAEKEGISCELI 270 (360)
Q Consensus 238 G~dv~Iia~G~~~~~--al~Aa~~L~~~Gi~v~Vi 270 (360)
|+.+++.-+|+.... +.+..+.|.+.|.++.||
T Consensus 5 ~k~IllgiTGsiaayk~~~~ll~~L~~~g~eV~vv 39 (207)
T 3mcu_A 5 GKRIGFGFTGSHCTYEEVMPHLEKLIAEGAEVRPV 39 (207)
T ss_dssp TCEEEEEECSCGGGGTTSHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEEEEChHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 456777777765433 677777787778888777
No 203
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=24.11 E-value=53 Score=29.26 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=25.5
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEe
Q 018167 238 GSDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (360)
Q Consensus 238 G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~ 272 (360)
..||+||+.|.. .+.+|..|.+.|+++.||+-
T Consensus 22 ~~~vvIIG~G~a---Gl~aA~~l~~~g~~v~vie~ 53 (338)
T 3itj_A 22 HNKVTIIGSGPA---AHTAAIYLARAEIKPILYEG 53 (338)
T ss_dssp EEEEEEECCSHH---HHHHHHHHHHTTCCCEEECC
T ss_pred CCCEEEECcCHH---HHHHHHHHHHCCCCEEEEec
Confidence 368999999973 34566777778999999987
No 204
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=24.00 E-value=3e+02 Score=27.63 Aligned_cols=25 Identities=8% Similarity=-0.156 Sum_probs=21.5
Q ss_pred eeCCHHHHHHHHHHhHhCCCCEEEe
Q 018167 183 IPRSPRQAKGLLLSCIRDPNPVVFF 207 (360)
Q Consensus 183 ~P~d~~e~~~~l~~a~~~~~P~~i~ 207 (360)
...|..++..+++.|.+.++|++|.
T Consensus 255 dG~d~~~l~~al~~A~~~~gP~lI~ 279 (621)
T 2o1s_A 255 DGHDVLGLITTLKNMRDLKGPQFLH 279 (621)
T ss_dssp ETTCHHHHHHHHHHHHHSCSEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 4468999999999999889999884
No 205
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=23.97 E-value=1.3e+02 Score=28.52 Aligned_cols=59 Identities=14% Similarity=0.078 Sum_probs=39.1
Q ss_pred eeCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEecc-------------ccCCcHHHHHHHHhcCCeEEEEeC
Q 018167 236 REGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKT-------------LIPWDKETVEASVRKTGRLLISHE 298 (360)
Q Consensus 236 ~~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~-------------ikP~d~~~l~~~~~~~~~ivvvEe 298 (360)
.+|+.+.|++-|........++ ++.|+++-++|... ....|.+.|.+.+++.. +|+.|-
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~aa---~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D-~V~~~~ 104 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFAA---QSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCE-AVSTEF 104 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHH---HHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCS-EEEECC
T ss_pred CCCCEEEEECCCHHHHHHHHHH---HHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCC-EEEEcc
Confidence 3577899999887655544444 45699998888531 12356788888886655 455653
No 206
>3le1_A Phosphotransferase system, HPR-related proteins; HPR PTS phosphotransfer, kinase; 1.51A {Thermoanaerobacter tengcongensis} SCOP: d.94.1.0 PDB: 3le3_A 3lnw_A 3lfg_A 3le5_A
Probab=23.91 E-value=85 Score=23.04 Aligned_cols=31 Identities=16% Similarity=0.178 Sum_probs=25.6
Q ss_pred eeeCCcEEEEEechhHHHHHHHHHHHHhcCC
Q 018167 235 IREGSDITLVGWGAQLSIMEQACLDAEKEGI 265 (360)
Q Consensus 235 l~~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi 265 (360)
++.|..++|.+.|.--..|+++...|-+++.
T Consensus 55 ~~~G~~i~i~a~G~De~~A~~~l~~l~~~~f 85 (88)
T 3le1_A 55 VSQGNVVKLSAEGDDEEEAIKALVDLIESKF 85 (88)
T ss_dssp CCTTCEEEEEEESTTHHHHHHHHHHHHHTTT
T ss_pred CCCCCEEEEEEeCCCHHHHHHHHHHHHHhcc
Confidence 3578899999999999999998887766554
No 207
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=23.56 E-value=65 Score=28.33 Aligned_cols=32 Identities=22% Similarity=0.244 Sum_probs=24.7
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEec
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~ 273 (360)
.|++||+.|.. .+.+|..|.+.|.++.||+-.
T Consensus 16 ~~vvIIG~G~a---Gl~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 16 FDVIIVGLGPA---AYGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp EEEEEECCSHH---HHHHHHHHHHTTCCEEEEESS
T ss_pred cCEEEECccHH---HHHHHHHHHHCCCcEEEEecc
Confidence 48999999974 344566677789999999963
No 208
>3cpk_A Uncharacterized protein Q7W7N7_borpa; BPP2477, BER31, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Bordetella parapertussis 12822} PDB: 2k2e_A
Probab=23.35 E-value=27 Score=28.86 Aligned_cols=36 Identities=19% Similarity=0.303 Sum_probs=26.5
Q ss_pred CCcEEEEEechhHHH-HHHHHHHHHhcCCCeeEEEec
Q 018167 238 GSDITLVGWGAQLSI-MEQACLDAEKEGISCELIDLK 273 (360)
Q Consensus 238 G~dv~Iia~G~~~~~-al~Aa~~L~~~Gi~v~Vi~~~ 273 (360)
+-|++||+||..... --+..+.|++.||.+++.|-.
T Consensus 88 ~pEvliiGTG~~~~~l~p~~~~~L~~~GIgvE~M~T~ 124 (150)
T 3cpk_A 88 APEVLLVGTGRRQHLLGPEQVRPLLAMGVGVEAMDTQ 124 (150)
T ss_dssp CCSEEEEECTTSCCCCCHHHHHHHHTTTCEEEEECHH
T ss_pred CCCEEEEcCCCCCCCCCHHHHHHHHHcCCEEEEeCHH
Confidence 579999999985432 234556788889999988743
No 209
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=22.93 E-value=58 Score=30.47 Aligned_cols=30 Identities=27% Similarity=0.253 Sum_probs=23.9
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCCeeEEEe
Q 018167 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (360)
Q Consensus 240 dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~ 272 (360)
||+||+.|.. -+.||..|.+.|.+|.|++-
T Consensus 3 dVvVIGaG~a---Gl~aA~~L~~~G~~V~vlE~ 32 (431)
T 3k7m_X 3 DAIVVGGGFS---GLKAARDLTNAGKKVLLLEG 32 (431)
T ss_dssp EEEEECCBHH---HHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECCcHH---HHHHHHHHHHcCCeEEEEec
Confidence 7999999874 34466778888999999976
No 210
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=22.81 E-value=62 Score=27.70 Aligned_cols=56 Identities=13% Similarity=0.252 Sum_probs=33.9
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEecc--------------ccCCcHHHHHHH-HhcCCeEEEE
Q 018167 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKT--------------LIPWDKETVEAS-VRKTGRLLIS 296 (360)
Q Consensus 237 ~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~--------------ikP~d~~~l~~~-~~~~~~ivvv 296 (360)
....++|+++|... ...++.|.++|. +.++|... -.+.|.+.+.+. +.+...+++.
T Consensus 8 ~~~~viI~G~G~~G---~~la~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (234)
T 2aef_A 8 KSRHVVICGWSEST---LECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVD 78 (234)
T ss_dssp --CEEEEESCCHHH---HHHHHHSTTSEE-EEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred CCCEEEEECCChHH---HHHHHHHHhCCe-EEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence 34578999998644 445677878888 88887431 134455666554 5555655544
No 211
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=22.63 E-value=4.7e+02 Score=24.35 Aligned_cols=62 Identities=5% Similarity=-0.012 Sum_probs=38.4
Q ss_pred EEEEech-hHHHHHHHHHHHHhcCCCeeEEEeccccCCcHH-----HHHHHHhcC-CeEEEEeCCCcCCc
Q 018167 242 TLVGWGA-QLSIMEQACLDAEKEGISCELIDLKTLIPWDKE-----TVEASVRKT-GRLLISHEAPVTGG 304 (360)
Q Consensus 242 ~Iia~G~-~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~-----~l~~~~~~~-~~ivvvEe~~~~GG 304 (360)
+|+++|. +..+.+.|++.+.+.|-++.+..+.+-.|-+.+ ++...-+.+ +..|..-+|.. |+
T Consensus 138 viLstGmstl~Ei~~Ave~i~~~g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lpVG~SdHt~-g~ 206 (350)
T 3g8r_A 138 VVASTAGARREDIDKVVSFMLHRGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVRIGYSTHED-PD 206 (350)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTTTCCEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSEEEEEECCC-SS
T ss_pred EEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCcccCCHHHHHHHHHHCCCCCEEcCCCCC-CC
Confidence 3677884 568899999999888877666655555564443 443333345 44455666753 44
No 212
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=22.57 E-value=2.1e+02 Score=25.87 Aligned_cols=19 Identities=26% Similarity=0.253 Sum_probs=8.2
Q ss_pred HHHHHHHhcCCeEEEEeCC
Q 018167 281 ETVEASVRKTGRLLISHEA 299 (360)
Q Consensus 281 ~~l~~~~~~~~~ivvvEe~ 299 (360)
+.|.+.+++++-++++||.
T Consensus 163 ~~i~~l~~~~~~~li~Dea 181 (396)
T 2ch1_A 163 EGVGQICHQHDCLLIVDAV 181 (396)
T ss_dssp TTHHHHHHHTTCEEEEECT
T ss_pred HHHHHHHHHcCCEEEEEcc
Confidence 3444444444444444443
No 213
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=22.38 E-value=5.1e+02 Score=28.52 Aligned_cols=32 Identities=19% Similarity=0.047 Sum_probs=27.5
Q ss_pred CCCCcEEEee-CCHHHHHHHHHHhHhCCCCEEE
Q 018167 175 HVPGLKVVIP-RSPRQAKGLLLSCIRDPNPVVF 206 (360)
Q Consensus 175 ~iPn~~V~~P-~d~~e~~~~l~~a~~~~~P~~i 206 (360)
.++++....+ .++.|+..+++.|+++++|++|
T Consensus 1032 G~~~va~~~v~~~~~~l~~al~eAl~~~GP~lI 1064 (1231)
T 2c42_A 1032 GYVYVATVSMGYSKQQFLKVLKEAESFPGPSLV 1064 (1231)
T ss_dssp SSSEEEEECTTTCHHHHHHHHHHHHHSSSCEEE
T ss_pred CCCEEEEEeccCCHHHHHHHHHHHHhcCCCEEE
Confidence 4566666678 5999999999999999999999
No 214
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=22.36 E-value=1.9e+02 Score=25.90 Aligned_cols=25 Identities=16% Similarity=0.113 Sum_probs=11.6
Q ss_pred CCCeeEEEeccccCCcHHHHHHHHh
Q 018167 264 GISCELIDLKTLIPWDKETVEASVR 288 (360)
Q Consensus 264 Gi~v~Vi~~~~ikP~d~~~l~~~~~ 288 (360)
|.++..+++..=..+|.+.|.+.++
T Consensus 121 g~~~~~~~~~~~~~~d~~~l~~~i~ 145 (393)
T 3kgw_A 121 GARVHQMIKKPGEHYTLQEVEEGLA 145 (393)
T ss_dssp TCEEEEEECCTTCCCCHHHHHHHHH
T ss_pred CCceEEEeCCCCCCCCHHHHHHHHh
Confidence 4444444443323355555555544
No 215
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=22.28 E-value=1.1e+02 Score=28.43 Aligned_cols=57 Identities=5% Similarity=0.123 Sum_probs=37.8
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEec----------------cccC---CcHHHHHHHHhcCCeEEE
Q 018167 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK----------------TLIP---WDKETVEASVRKTGRLLI 295 (360)
Q Consensus 237 ~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~----------------~ikP---~d~~~l~~~~~~~~~ivv 295 (360)
+|+.++||+.|.++... ++..|...|-.++|.|.. +..+ .+.+.+.+.+++..-||+
T Consensus 176 ~gk~vvVIG~G~iVG~~--~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIs 251 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRP--LAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT 251 (320)
T ss_dssp TTCEEEEECCCTTTHHH--HHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECCCcchHHH--HHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEE
Confidence 36789999999876654 456676778888887542 1111 333667788877775544
No 216
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=22.26 E-value=1.9e+02 Score=26.50 Aligned_cols=69 Identities=12% Similarity=0.034 Sum_probs=48.0
Q ss_pred cHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCccccchhHHHHhCCC---cEEec---hhHHHHHHHHHHHHhcCCC
Q 018167 41 NLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKS---RVFNT---PLCEQGIVGFAIGLAAMGN 110 (360)
Q Consensus 41 ~~r~a~~~~L~~l~~~~~~vv~i~~Dl~~g~~~~~~~~~~~~~gp~---r~i~~---GIaE~~~vg~AaGlA~~G~ 110 (360)
..-..|.+++.++.++..+|++++=-.+.+|.|....-.++.| |+ ++||+ +..+..+|--|+=++..|.
T Consensus 98 Ps~~~~~~~fe~l~~~~~~Ii~I~iSS~LSGTy~sA~~Aa~~~-~~~~I~ViDS~~~s~g~g~lv~~Aa~l~~~G~ 172 (315)
T 3fys_A 98 PPIGELVALYEELGKSYDAVISIHLSSGISGTFSSAAAADSMV-DNIDVYPFDSEISCLAQGFYALKAAELIKNGA 172 (315)
T ss_dssp CCHHHHHHHHHHHTTTCSEEEEEESCTTTCSHHHHHHHGGGGC-SSCEEEEEECSSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHhcCCcEEEEeCCCcHhHHHHHHHHHHHhC-CCCCEEEECCchhHHHHHHHHHHHHHHHHcCC
Confidence 3467788888888888888988874433334444334456678 76 56774 6677788888888888886
No 217
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=22.06 E-value=70 Score=28.55 Aligned_cols=32 Identities=22% Similarity=0.286 Sum_probs=24.1
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEec
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~ 273 (360)
.||+||+-|.. . +.+|..|.+.|++|.|++-.
T Consensus 3 ~dV~IIGaG~~-G--l~~A~~L~~~G~~V~vlE~~ 34 (336)
T 1yvv_A 3 VPIAIIGTGIA-G--LSAAQALTAAGHQVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHH-H--HHHHHHHHHTTCCEEEECSS
T ss_pred ceEEEECCcHH-H--HHHHHHHHHCCCcEEEEECC
Confidence 58999998873 2 23455677789999999865
No 218
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=22.03 E-value=64 Score=29.06 Aligned_cols=32 Identities=13% Similarity=0.061 Sum_probs=23.9
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEec
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~ 273 (360)
.||+||+.|..- +.+|-.|.+.|.+|.||+-.
T Consensus 5 ~dvvIIG~G~~G---l~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 5 IDCIVIGAGVVG---LAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp EEEEEECCSHHH---HHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECCCHHH---HHHHHHHHhCCCeEEEEeCC
Confidence 489999999742 23445566689999999876
No 219
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=22.01 E-value=78 Score=29.57 Aligned_cols=37 Identities=16% Similarity=0.236 Sum_probs=26.9
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCC--CeeEEEeccccC
Q 018167 238 GSDITLVGWGAQLSIMEQACLDAEKEGI--SCELIDLKTLIP 277 (360)
Q Consensus 238 G~dv~Iia~G~~~~~al~Aa~~L~~~Gi--~v~Vi~~~~ikP 277 (360)
+++++||+.|.. .+.||..|++.|. ++.||+-..-.|
T Consensus 1 ~k~vvIIGaG~a---Gl~aA~~L~~~g~~~~V~lie~~~~~~ 39 (404)
T 3fg2_P 1 NDTVLIAGAGHA---GFQVAVSLRQAKYPGRIALINDEKHLP 39 (404)
T ss_dssp CCCEEEECCSHH---HHHHHHHHHHTTCCSCEEEECCSSSSS
T ss_pred CCCEEEEcChHH---HHHHHHHHHhhCcCCCEEEEeCCCCCC
Confidence 368999998863 4556777888888 889998755333
No 220
>1nh9_A MJA10B, DNA-binding protein ALBA; 2.00A {Methanocaldococcus jannaschii} SCOP: d.68.6.1
Probab=21.93 E-value=2e+02 Score=21.04 Aligned_cols=41 Identities=10% Similarity=0.121 Sum_probs=32.9
Q ss_pred eeCCcEEEEEechhHHHHHHHHHHHHhc---CCCeeEEEecccc
Q 018167 236 REGSDITLVGWGAQLSIMEQACLDAEKE---GISCELIDLKTLI 276 (360)
Q Consensus 236 ~~G~dv~Iia~G~~~~~al~Aa~~L~~~---Gi~v~Vi~~~~ik 276 (360)
.+|+++.|=|.|.....|...++.|+.. |+++.-++..|..
T Consensus 24 ~~g~eV~ikA~G~AIskAV~vaeilk~r~~~~l~v~~i~i~s~~ 67 (87)
T 1nh9_A 24 TSNDEVIIKARGKAINKAVDVAEMIRNRFIKDIKIKKIEIGTDK 67 (87)
T ss_dssp HHCSEEEEEEEGGGHHHHHHHHHHHHHHTCTTCEEEEEEEEEEC
T ss_pred cCCCEEEEEEechHHHHHHHHHHHHHHhccCCeEEEEEEEeEEE
Confidence 3568899999999999999999999876 3566666666654
No 221
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=21.55 E-value=78 Score=27.62 Aligned_cols=34 Identities=18% Similarity=0.277 Sum_probs=26.3
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEec
Q 018167 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (360)
Q Consensus 237 ~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~ 273 (360)
+|+.++||+.|.+ |...++.|.+.|-++.||+..
T Consensus 30 ~gk~VLVVGgG~v---a~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTI---ATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHH---HHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHH---HHHHHHHHHHCCCEEEEECCC
Confidence 5788999998864 444566777889999999864
No 222
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=21.28 E-value=67 Score=29.35 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=23.8
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEecc
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKT 274 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ 274 (360)
.||+||+-|..- +.+|..|.+.|.+|.||+-..
T Consensus 18 ~dvvIIGgG~~G---l~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIG---SAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHH---HHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHH---HHHHHHHHhCCCcEEEEeCCC
Confidence 489999988642 234445666799999998753
No 223
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=21.14 E-value=1.8e+02 Score=22.77 Aligned_cols=54 Identities=13% Similarity=0.084 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcC------------CeEEEEeCCCcCCchHHHHH
Q 018167 252 IMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKT------------GRLLISHEAPVTGGFGAEIS 310 (360)
Q Consensus 252 ~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~------------~~ivvvEe~~~~GGlgs~v~ 310 (360)
.+..|...|+..||+.+.+|+.. |.+.-.+..+++ -..|++++. ..||+-...+
T Consensus 18 ~c~~aK~lL~~kgV~feEidI~~----d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi~~~-~iGG~Dd~~~ 83 (121)
T 1u6t_A 18 KQQDVLGFLEANKIGFEEKDIAA----NEENRKWMRENVPENSRPATGYPLPPQIFNESQ-YRGDYDAFFE 83 (121)
T ss_dssp HHHHHHHHHHHTTCCEEEEECTT----CHHHHHHHHHHSCGGGSCSSSSCCSCEEEETTE-EEEEHHHHHH
T ss_pred HHHHHHHHHHHCCCceEEEECCC----CHHHHHHHHHhccccccccCCCcCCCEEEECCE-EEechHHHHH
Confidence 35788889999999999999975 444333333232 244667664 4699866443
No 224
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=21.00 E-value=2.6e+02 Score=22.20 Aligned_cols=59 Identities=14% Similarity=0.137 Sum_probs=39.7
Q ss_pred CcEEEEEech-hHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHH-HhcCCeEEEEeC
Q 018167 239 SDITLVGWGA-QLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEAS-VRKTGRLLISHE 298 (360)
Q Consensus 239 ~dv~Iia~G~-~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~-~~~~~~ivvvEe 298 (360)
.++.|+..+. ...-|.+..+.|.+.|+.+++.+.++=.++. ..|.+. ..+..-+++|-+
T Consensus 9 ~Qv~IlpVs~~~~~YA~~V~~~L~~~GiRvevD~~r~~e~Lg-~kIR~a~~~kvPy~lVVG~ 69 (130)
T 1v95_A 9 VDCSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFLNTEVSLS-QALEDVSRGGSPFAIVITQ 69 (130)
T ss_dssp CTEEEEESSSGGGHHHHHHHHHHHTTTCCEEEEECTTSSCHH-HHHHHHHHHTCSEEEEECH
T ss_pred CeEEEEEeCcchHHHHHHHHHHHHHCCCEEEEecCCCCCcHH-HHHHHHHHcCCCEEEEEec
Confidence 4677776664 4688999999999999999986654323443 334443 445677777743
No 225
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=20.87 E-value=2.2e+02 Score=22.87 Aligned_cols=81 Identities=12% Similarity=0.183 Sum_probs=44.8
Q ss_pred HHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHHHHHHhccccCCCc-eEEEecCCCC
Q 018167 256 ACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHEAPVTGGFGAEISASILERCFLRLEAP-VARVCGLDTP 334 (360)
Q Consensus 256 Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~~l~~~~~~~l~~~-~~~i~~~~~~ 334 (360)
|.+.|++.||++.= ..-++++.+.+ ....-||++++....- + .. .+.+ +... ..++|
T Consensus 66 a~~vl~e~Gidis~---h~ar~l~~~~~----~~~DlIitM~~~~~~~---------~-p~----~~~k~~~~w-~VpDP 123 (148)
T 3rh0_A 66 SVESIAEVGADMSQ---GIPKAIDPELL----RTVDRVVILGDDAQVD---------M-PE----SAQGALERW-SIEEP 123 (148)
T ss_dssp HHHHHHHTTCCCTT---CCCCBCCHHHH----HHCSEEEEESSSCCCC---------C-CT----TCCSEEEEE-CCCCC
T ss_pred HHHHHHHcCCCcCC---CeeeECCHHHh----cCCCEEEEecChHHhh---------C-cc----CCCCEeecC-CcCCC
Confidence 33445677887542 33467776644 3578899998654321 0 00 1112 2222 45666
Q ss_pred ccccccccCCCCHHHHHHHHHHhhh
Q 018167 335 FPLVFEPFYMPTKNKILDAIKSTVN 359 (360)
Q Consensus 335 ~~~~~e~~gl~~~~~I~~~i~~~l~ 359 (360)
+..-.+.|.- ..+.|.++++++++
T Consensus 124 y~~~~~~F~~-v~d~I~~~v~~Ll~ 147 (148)
T 3rh0_A 124 DAQGMERMRI-VRDQIDNRVQALLA 147 (148)
T ss_dssp SCCHHHHHHH-HHHHHHHHHHHHHC
T ss_pred CCCCHHHHHH-HHHHHHHHHHHHHh
Confidence 6443455555 66778888877764
No 226
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=20.85 E-value=1.9e+02 Score=25.62 Aligned_cols=66 Identities=15% Similarity=0.113 Sum_probs=44.3
Q ss_pred hHHHHHHHHHHHHhcCCCeeEEEecccc--C-------------------------------C--cHHHHHHHHhcCCeE
Q 018167 249 QLSIMEQACLDAEKEGISCELIDLKTLI--P-------------------------------W--DKETVEASVRKTGRL 293 (360)
Q Consensus 249 ~~~~al~Aa~~L~~~Gi~v~Vi~~~~ik--P-------------------------------~--d~~~l~~~~~~~~~i 293 (360)
....+..+++.|++.|.+++++|+.... | + |.+.+.+.+..++.|
T Consensus 18 t~~la~~~~~~l~~~g~eV~~~dL~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~~~~~~l~~AD~I 97 (273)
T 1d4a_A 18 NYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKLKDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLV 97 (273)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEETTTTTCCCCCCGGGBCSCCSSTTSCCHHHHHHHHHHHTCBCHHHHHHHHHHHHCSEE
T ss_pred HHHHHHHHHHHHHhCCCeEEEEEccccCCCCcCCHHHHHhhccCcccccchhhhhhhhhcccCcHHHHHHHHHHHhCCEE
Confidence 3455566677788889999999998654 1 1 233445567778877
Q ss_pred EEEeCCCcCCchHHHHHHHHHH
Q 018167 294 LISHEAPVTGGFGAEISASILE 315 (360)
Q Consensus 294 vvvEe~~~~GGlgs~v~~~l~~ 315 (360)
|+.=- ...+++-+.+..++-.
T Consensus 98 V~~~P-~y~~s~Pa~LK~~iDr 118 (273)
T 1d4a_A 98 IFQFP-LQWFGVPAILKGWFER 118 (273)
T ss_dssp EEEEE-CBTTBCCHHHHHHHHH
T ss_pred EEECc-hhhccCCHHHHHHHHH
Confidence 76643 3467888877777654
No 227
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=20.64 E-value=1.7e+02 Score=24.29 Aligned_cols=64 Identities=17% Similarity=0.117 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEecccc--C----------------CcHHHHHHHHhcCCeEEEEeCCCcCCchHHHHHH
Q 018167 250 LSIMEQACLDAEKEGISCELIDLKTLI--P----------------WDKETVEASVRKTGRLLISHEAPVTGGFGAEISA 311 (360)
Q Consensus 250 ~~~al~Aa~~L~~~Gi~v~Vi~~~~ik--P----------------~d~~~l~~~~~~~~~ivvvEe~~~~GGlgs~v~~ 311 (360)
...+..+++.+ +.|.+++++|+.... | -|.+.+.+.++..+.||++-- ...+++-+.+..
T Consensus 17 ~~l~~~~~~~~-~~g~~v~~~dL~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~AD~iV~~~P-~y~~~~pa~LK~ 94 (196)
T 3lcm_A 17 AEILKQVQTNL-SKEHTVSTLDLYAEHFDPVLQFNETHKRRDLAKVAEMEKYRDLVTWADHLIFIFP-IWWSGMPAILKG 94 (196)
T ss_dssp HHHHHHHHHHS-CTTSEEEEEETTTTTCCCCCCCCSSSCGGGGGGCGGGHHHHHHHHHCSEEEEEEE-CBTTBCCHHHHH
T ss_pred HHHHHHHHHHh-cCCCeEEEEEcccCCCCccCChHHHHhhcCCCCcHHHHHHHHHHHhCCEEEEECc-hhhccccHHHHH
Confidence 34455556667 679999999998664 3 134567778888888777643 345778777777
Q ss_pred HHHH
Q 018167 312 SILE 315 (360)
Q Consensus 312 ~l~~ 315 (360)
++-.
T Consensus 95 ~iD~ 98 (196)
T 3lcm_A 95 FIDR 98 (196)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 228
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.51 E-value=96 Score=25.24 Aligned_cols=32 Identities=13% Similarity=0.118 Sum_probs=24.4
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhc-CCCeeEEEe
Q 018167 238 GSDITLVGWGAQLSIMEQACLDAEKE-GISCELIDL 272 (360)
Q Consensus 238 G~dv~Iia~G~~~~~al~Aa~~L~~~-Gi~v~Vi~~ 272 (360)
+..++|+++|.+-... ++.|.+. |.++.++|.
T Consensus 39 ~~~v~IiG~G~~G~~~---a~~L~~~~g~~V~vid~ 71 (183)
T 3c85_A 39 HAQVLILGMGRIGTGA---YDELRARYGKISLGIEI 71 (183)
T ss_dssp TCSEEEECCSHHHHHH---HHHHHHHHCSCEEEEES
T ss_pred CCcEEEECCCHHHHHH---HHHHHhccCCeEEEEEC
Confidence 5679999999866543 4567777 999999875
No 229
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=20.47 E-value=72 Score=28.48 Aligned_cols=32 Identities=22% Similarity=0.338 Sum_probs=24.4
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEec
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~ 273 (360)
.|++||+.|.. .+.+|..|.+.|+++.||+-.
T Consensus 4 ~~vvIIG~G~a---Gl~~A~~l~~~g~~v~vie~~ 35 (357)
T 4a9w_A 4 VDVVVIGGGQS---GLSAGYFLRRSGLSYVILDAE 35 (357)
T ss_dssp EEEEEECCSHH---HHHHHHHHHHSSCCEEEECCS
T ss_pred CCEEEECcCHH---HHHHHHHHHHCCCCEEEEECC
Confidence 47999999873 334556677789999999865
No 230
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=20.46 E-value=1.3e+02 Score=28.09 Aligned_cols=50 Identities=20% Similarity=0.238 Sum_probs=34.5
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEecc-ccC--CcHH---HHHHHHhc
Q 018167 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKT-LIP--WDKE---TVEASVRK 289 (360)
Q Consensus 237 ~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~-ikP--~d~~---~l~~~~~~ 289 (360)
.+++++||+.|. .++|.+..|.+.|.+++++.... +-| +|.+ .+.+.+++
T Consensus 144 ~~~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~ 199 (408)
T 2gqw_A 144 PQSRLLIVGGGV---IGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAA 199 (408)
T ss_dssp TTCEEEEECCSH---HHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHH
T ss_pred cCCeEEEECCCH---HHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHH
Confidence 367899998886 46677788888899999998653 333 6654 34444443
No 231
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=20.42 E-value=79 Score=29.16 Aligned_cols=33 Identities=18% Similarity=0.247 Sum_probs=23.6
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEecc
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKT 274 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ 274 (360)
.||+||+.|..- +.+|-.|.+.|.+|.||+-..
T Consensus 5 ~DVvIIGaG~~G---l~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVG---LATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHH---HHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHH---HHHHHHHHHCCCeEEEEeCCC
Confidence 489999999742 223445666799999998653
No 232
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=20.41 E-value=83 Score=27.90 Aligned_cols=31 Identities=23% Similarity=0.190 Sum_probs=22.4
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEe
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDL 272 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~ 272 (360)
-||+||+.|+.- +.||-.|...|.++.||+-
T Consensus 7 yDVvIIGaGpAG---lsAA~~lar~g~~v~lie~ 37 (304)
T 4fk1_A 7 IDCAVIGAGPAG---LNASLVLGRARKQIALFDN 37 (304)
T ss_dssp EEEEEECCSHHH---HHHHHHHHHTTCCEEEEEC
T ss_pred cCEEEECCCHHH---HHHHHHHHHCCCCEEEEeC
Confidence 389999999753 2344455567999999984
No 233
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=20.41 E-value=1.3e+02 Score=27.74 Aligned_cols=34 Identities=24% Similarity=0.536 Sum_probs=23.6
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCC-CeeEEEec
Q 018167 237 EGSDITLVGWGAQLSIMEQACLDAEKEGI-SCELIDLK 273 (360)
Q Consensus 237 ~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi-~v~Vi~~~ 273 (360)
+|+.++|++.|.+ +..++..|.+.|. ++.|++-.
T Consensus 153 ~gk~~lVlGaGG~---g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGA---ATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHH---HHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChH---HHHHHHHHHHCCCCEEEEEECC
Confidence 3677888888844 4445666777898 78777643
No 234
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=20.38 E-value=1.2e+02 Score=28.02 Aligned_cols=50 Identities=16% Similarity=0.271 Sum_probs=35.1
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEec-cccCCcHHH---HHHHHhc
Q 018167 237 EGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK-TLIPWDKET---VEASVRK 289 (360)
Q Consensus 237 ~G~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~-~ikP~d~~~---l~~~~~~ 289 (360)
.+++++||+.|. .++|.|..|.+.|.+++++... .+.|+|.+. +.+.+++
T Consensus 142 ~~~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~~ 195 (367)
T 1xhc_A 142 NSGEAIIIGGGF---IGLELAGNLAEAGYHVKLIHRGAMFLGLDEELSNMIKDMLEE 195 (367)
T ss_dssp HHSEEEEEECSH---HHHHHHHHHHHTTCEEEEECSSSCCTTCCHHHHHHHHHHHHH
T ss_pred cCCcEEEECCCH---HHHHHHHHHHhCCCEEEEEeCCCeeccCCHHHHHHHHHHHHH
Confidence 357899998886 5667778888889999999754 455577643 4444443
No 235
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=20.27 E-value=1.4e+02 Score=25.88 Aligned_cols=49 Identities=10% Similarity=0.018 Sum_probs=34.6
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHh
Q 018167 240 DITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVR 288 (360)
Q Consensus 240 dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~ 288 (360)
.-.|+-+|..-......++.|.++|.+|.+++-....-.|.+.+.+.++
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~Dl~d~~~~~~~~~ 60 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFN 60 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHH
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCeEEeccCccCCCCCHHHHHHHHH
Confidence 4445556776666777788888889888777655555567777877776
No 236
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=20.26 E-value=1.9e+02 Score=25.38 Aligned_cols=51 Identities=25% Similarity=0.322 Sum_probs=36.2
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCCeeEEEeccccCCcHHHHHHHHhcCCeEEEEeC
Q 018167 241 ITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVRKTGRLLISHE 298 (360)
Q Consensus 241 v~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~~ikP~d~~~l~~~~~~~~~ivvvEe 298 (360)
.+|| ||.....-...++.|.++|.+|-+.|. +++.+.+..++..++..+.-
T Consensus 4 ~vlV-TGas~GIG~aia~~la~~Ga~V~~~~~------~~~~~~~~~~~~~~~~~~~~ 54 (247)
T 3ged_A 4 GVIV-TGGGHGIGKQICLDFLEAGDKVCFIDI------DEKRSADFAKERPNLFYFHG 54 (247)
T ss_dssp EEEE-ESTTSHHHHHHHHHHHHTTCEEEEEES------CHHHHHHHHTTCTTEEEEEC
T ss_pred EEEE-ecCCCHHHHHHHHHHHHCCCEEEEEeC------CHHHHHHHHHhcCCEEEEEe
Confidence 4444 577778888889999999999888774 45666666666666655543
No 237
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=20.24 E-value=74 Score=28.14 Aligned_cols=32 Identities=22% Similarity=0.212 Sum_probs=24.9
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCCeeEEEec
Q 018167 239 SDITLVGWGAQLSIMEQACLDAEKEGISCELIDLK 273 (360)
Q Consensus 239 ~dv~Iia~G~~~~~al~Aa~~L~~~Gi~v~Vi~~~ 273 (360)
.|++||+-|.. .+.||..|.+.|.++.||+-.
T Consensus 8 ~~vvIIG~G~a---Gl~aA~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 8 YDITIIGGGPV---GLFTAFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEEEECCSHH---HHHHHHHHHHTTCCEEEECSS
T ss_pred ceEEEECCCHH---HHHHHHHHHHCCCCEEEEEcC
Confidence 58999999973 345666777789999999874
Done!