BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018169
(360 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54IV7|RFT1_DICDI Protein RFT1 homolog OS=Dictyostelium discoideum GN=rft1 PE=3 SV=1
Length = 540
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 173/301 (57%), Gaps = 27/301 (8%)
Query: 18 YLLATQFLSRGIPFVFNSWIVRHLTEADYAIYAVQFHLFVTCVLFLSREGFRRACMRADI 77
YL+ Q +SR F+ N+ ++ + ++ + + A+Q+ L + +LFLSRE RRAC R +I
Sbjct: 20 YLIGLQIISRLFTFIINTLVIVGVDDSIFGVSAIQYQLLSSIILFLSREAIRRACTRVNI 79
Query: 78 KCDGASREENAAKLLKVAWLTLPLGIFITIGACFFVLWW---QGLSYSNPYAQAIFINGF 134
D + + N ++ ++WL LP+GI ++I F L+ + L N Y + +
Sbjct: 80 T-DKLNNDNNLKSVINLSWLVLPIGIGLSIIFENFFLYTSTKETLEILN-YHYGLRLFTI 137
Query: 135 ACVLELLAEPLYILSQNLLLLRLRLVVETVATFSRCFTMCILIVKQYEMEKGIV-FALSQ 193
+ +LELL+EP+YIL+QNLLL ++R VE A F + F+ IV + G++ F +Q
Sbjct: 138 SSILELLSEPMYILAQNLLLFKIRTTVEGFALFFKTFSTYYFIVI---LNMGLIGFGYAQ 194
Query: 194 VAYAASLFLGYWGYFLLF--------------GAFKTSD-LFPFRLGNMMSYDKQLANMC 238
+ Y+ +L +GY+GYFL+ FK+ D LFP + + D+ L +
Sbjct: 195 ILYSLTLVIGYFGYFLINIINNNKNKDNKEFSNCFKSIDQLFP-KFSTRI--DRNLIKLS 251
Query: 239 TLFTFQSFRKLLLQEGEKLVLVWLDTPYNQAVYGLVDKLGSLVVRMVFLPFEESSYATFA 298
L+T+QS KLLLQEGEK VL + +T QA++ +V LGSL+VR +FLP EE+ + F
Sbjct: 252 LLYTWQSIYKLLLQEGEKFVLFFSETNQGQAIFAIVSNLGSLIVRFLFLPIEETCFLMFP 311
Query: 299 R 299
+
Sbjct: 312 K 312
>sp|Q0D2E8|RFT1_XENTR Protein RFT1 homolog OS=Xenopus tropicalis GN=rft1 PE=2 SV=1
Length = 539
Score = 151 bits (382), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 185/354 (52%), Gaps = 46/354 (12%)
Query: 13 SRTFKYLLATQFLSRGIPFVFNSWIVRHLTEADYAIYAVQFHLFVTCVLFLSREGFRRAC 72
++ Y + Q L R + F N++ +R++++ I V+ LF T V+FL+RE FRRAC
Sbjct: 11 TKLASYSVILQILFRVLTFALNAFTLRYVSKEIIGIVNVRLTLFYTTVVFLAREAFRRAC 70
Query: 73 MRADIKCDGASREENAAKLLKVAWLTLPLGIFITIGACF-FVL---WWQGLSYSNP---- 124
+ S +++ + + WL +PLGI C+ F+L W Q L P
Sbjct: 71 L-------SHSAQQSWRHTIHLTWLAVPLGI------CWSFILGWIWLQILEVPEPEAIP 117
Query: 125 -YAQAIFINGFACVLELLAEPLYILSQNLLLLRLRLVVETVATFSRCFTMCILIV--KQY 181
Y ++ GF+ V+ELLAEP ++L+Q L ++L++V E++A RC IL++ Q+
Sbjct: 118 YYNIGVWAFGFSAVVELLAEPFWVLAQAHLFVKLKVVAESLAIIIRCSVTVILVLLCPQW 177
Query: 182 EMEKGIVFALSQVAYAASLFLGYWGYFLLFGAFKTSDLFPFRLGNMMSY----------- 230
+ ++F+L+QV Y ++L L Y YF F ++ PF L M +
Sbjct: 178 GL---LIFSLAQVLYTSALALCYIAYFARFLGSLEAEKKPFPLRRMREFLPRFSSSQAFL 234
Query: 231 DKQLANMCTLFTFQSFRKLLLQEGEKLVLVWLDTPY--NQAVYGLVDKLGSLVVRMVFLP 288
D + A + F QSF K +L EGE+ V+ +L+ +Q VY +V+ LGSLV R +FLP
Sbjct: 235 DWKQAWLAWSFFKQSFLKQILTEGERYVMTFLNVLSFGDQGVYDIVNNLGSLVARFIFLP 294
Query: 289 FEESSYATFARS-ASGQYPQKSKKIGNSLAEA-----LKLVLLIGMFFIELKFS 336
EES Y FA+ G+ Q +K S+A LKLV LIG+ I ++
Sbjct: 295 IEESFYVFFAKVLERGKKVQSQRKEEISMASEVLESLLKLVTLIGLVIIAFGYA 348
>sp|Q96AA3|RFT1_HUMAN Protein RFT1 homolog OS=Homo sapiens GN=RFT1 PE=1 SV=1
Length = 541
Score = 128 bits (322), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 158/297 (53%), Gaps = 31/297 (10%)
Query: 23 QFLSRGIPFVFNSWIVRHLTEADYAIYAVQFHLFVTCVLFLSREGFRRACMRADIKCDGA 82
Q L R I FV N++I+R L++ + V+ L + LFL+RE FRRAC+ + D
Sbjct: 21 QVLFRLITFVLNAFILRFLSKEIVGVVNVRLTLLYSTTLFLAREAFRRACLSGGTQRD-- 78
Query: 83 SREENAAKLLKVAWLTLPLGIFITIGACFFVLWWQGLSYSNP-----YAQAIFINGFACV 137
++ L + WLT+PLG+F ++ + +W Q L +P YA + + G + V
Sbjct: 79 -----WSQTLNLLWLTVPLGVFWSLFLGW--IWLQLLEVPDPNVVPHYATGVVLFGLSAV 131
Query: 138 LELLAEPLYILSQNLLLLRLRLVVETVATFSRCFTMCILIVKQYEMEKGI-VFALSQVAY 196
+ELL EP ++L+Q + ++L+++ E+++ + L++ + G+ +F+L+Q+ Y
Sbjct: 132 VELLGEPFWVLAQAHMFVKLKVIAESLSVILKSVLTAFLVL--WLPHWGLYIFSLAQLFY 189
Query: 197 AASLFLGYWGYFL-LFGA-----------FKTSDLFPFRLGNMMSYDKQLANMCTLFTFQ 244
L L Y YF L G+ + +DL P N + + A + F Q
Sbjct: 190 TTVLVLCYVIYFTKLLGSPESTKLQTLPVSRITDLLPNITRNGAFINWKEAKLTWSFFKQ 249
Query: 245 SFRKLLLQEGEKLVLVWLDTPY--NQAVYGLVDKLGSLVVRMVFLPFEESSYATFAR 299
SF K +L EGE+ V+ +L+ +Q VY +V+ LGSLV R++F P EES Y FA+
Sbjct: 250 SFLKQILTEGERYVMTFLNVLNFGDQGVYDIVNNLGSLVARLIFQPIEESFYIFFAK 306
>sp|Q8C3B8|RFT1_MOUSE Protein RFT1 homolog OS=Mus musculus GN=Rft1 PE=2 SV=2
Length = 541
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 154/297 (51%), Gaps = 31/297 (10%)
Query: 23 QFLSRGIPFVFNSWIVRHLTEADYAIYAVQFHLFVTCVLFLSREGFRRACMRADIKCDGA 82
Q L R I FV N++I+R L++ I V+ L + FL+RE FRRAC+ GA
Sbjct: 21 QVLFRLITFVLNAFILRFLSKEIVGIVNVRLTLLYSTTTFLAREAFRRACLSG-----GA 75
Query: 83 SREENAAKLLKVAWLTLPLGIFITIGACFFVLWWQGLSYSNP-----YAQAIFINGFACV 137
R+ + + L + WLT+PLGIF + +C +W Q L +P Y + G + V
Sbjct: 76 QRDWS--QTLNLLWLTVPLGIFWS--SCLGWVWLQLLEVPDPDVVPYYGTGVLFFGLSAV 131
Query: 138 LELLAEPLYILSQNLLLLRLRLVVETVATFSRCFTMCILIVKQYEMEKGI-VFALSQVAY 196
+ELL EP ++L+Q + ++L+++ E+++ R +L++ + G+ +F+L+Q+ Y
Sbjct: 132 VELLGEPFWVLAQAHMFVKLKVLAESMSVILRSVLTALLVL--WLPHWGLYIFSLAQLLY 189
Query: 197 AASLFLGYWGYF------------LLFGAFKTSDLFPFRLGNMMSYDKQLANMCTLFTFQ 244
L L Y Y L + + L P + + + A + F Q
Sbjct: 190 TTVLVLCYAIYLIQLLRSPESAKQLTLPVSRVTQLLPSISRSRAFVNWKEAGLAWSFFKQ 249
Query: 245 SFRKLLLQEGEKLVLVWLDTPY--NQAVYGLVDKLGSLVVRMVFLPFEESSYATFAR 299
SF K +L EGE+ V+ +L+ +Q VY +V+ LGSLV R++F P EES Y FA+
Sbjct: 250 SFLKQILTEGERYVMTFLNVLNFGDQGVYDIVNNLGSLVARLIFQPVEESFYLFFAK 306
>sp|Q5A6N8|RFT1_CANAL Oligosaccharide translocation protein RFT1 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=RFT1 PE=3 SV=1
Length = 561
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 174/367 (47%), Gaps = 49/367 (13%)
Query: 2 SRAPVDHSTSLSRTFK---YLLATQFLSRGIPFVFNSWIVRHLTEADYAIYAVQFHLFVT 58
S+ P + + + + K +L+ Q +++ + FV N I+R+L+ + I V +L
Sbjct: 6 SKQPGNDANDANSSVKGVSHLIIVQIIAKLLTFVLNQLIIRYLSPS---IIGVTTYLEFI 62
Query: 59 C--VLFLSREGFRRACMRADIKCDGASREENAAKLLKVAWLTLPLG--IFITIGACFFVL 114
C +LF SRE R + R ++ + +++ A K++ L + IF+ IG
Sbjct: 63 CSTILFFSRESIRLSVQR--VRNNSDNKDYVAQKVVNFGILAIAFAFPIFMVIG------ 114
Query: 115 WWQGLSYSN--------PYAQAIFINGFACV-LELLAEPLYILSQNLLLLRLRLVVETVA 165
+WQ L+YS+ P+ + + + A V LELL EP+Y L Q L R E A
Sbjct: 115 YWQ-LNYSSVMDKLFVSPFYKPVIVLFVASVILELLVEPIYCLYQFQLDFGKRSKFEGSA 173
Query: 166 TFSRCFT--MCILIVKQYEMEK---GIV---FALSQVAYAASLFLGYWGYFLL-FGAFKT 216
F +C + IL+ +QY +++ G+ FAL+Q +Y+ +LF Y F F K
Sbjct: 174 IFVKCIVSVLSILLARQYFVDQKFEGVAICAFALAQFSYSLTLFACYLMSFRFEFQNNKI 233
Query: 217 S-DLFPFRLGNMMSY--DKQLANMCTLFTFQSFRKLLLQEGEKLVLVWLDTPYNQAVYGL 273
+ +L + N + ++ + F Q K L EG+KL++ L T Q +Y +
Sbjct: 234 NYNLVKLKDENAREFYFEQDTLTIVKGFFVQMIFKQFLTEGDKLLISHLCTIEEQGMYAV 293
Query: 274 VDKLGSLVVRMVFLPFEESSYATF-------ARSASGQYPQKSKKIGNSLAEALKLVLLI 326
+ GS++ R++F P EES+ F RS + PQKS+ + + + LI
Sbjct: 294 MANYGSIIARLLFQPLEESTRLMFTKLLNENTRSQGDEKPQKSE--SHKCMQTFNYLKLI 351
Query: 327 GMFFIEL 333
+F+ L
Sbjct: 352 SIFYFNL 358
>sp|Q9Y123|RFT1_DROME Protein RFT1 homolog OS=Drosophila melanogaster GN=CG3149 PE=2 SV=1
Length = 556
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 60/369 (16%)
Query: 23 QFLSRGIPFVFNSWIVRHLTEADYAIYAVQFHLFVTCVLFLSREGFRRACMRADIKCDGA 82
Q L R + F N++IVRH+ I V+ L + +LFLSRE RA + A+ +
Sbjct: 20 QILCRILTFGINAYIVRHVGREVLGIMNVRLLLLESTLLFLSREAINRAALSANAQ---Q 76
Query: 83 SREENAAKLLKVAWLTLPLGIFITIGACFFVLWWQGLS-----YSNPYAQAIFINGFACV 137
+ A+L+ WLT+P+ + C ++ W LS Y++ Y A + F+CV
Sbjct: 77 GDRCSWAQLINQMWLTVPI-CAVLCAPCLYI-WLNWLSAVDAIYASQYEFACYAVAFSCV 134
Query: 138 LELLAEPLYILSQNLLLLRLRLVVETVATFSRCFTMCILIVKQYEMEKGIVFALSQVAYA 197
LEL+AE ++Q ++L++++ T+ R + + IV FA++Q++ A
Sbjct: 135 LELMAESAVFVAQVFCFVKLKILLNTLHILVRS-AIFLWIVTGDRSAAINAFAIAQLSSA 193
Query: 198 ASLFLGYWGYFLLF------------------------GAFKTSDLFPFRL--------- 224
++ LG +G+F + ++ D FPF+
Sbjct: 194 VTIVLGQYGFFYFYLKGFKDFVTQQAKKKPVAPKAWQVSLYEHMDDFPFKQLSDFLPGVM 253
Query: 225 --GNMMSYDKQLANMCTLFTFQSFRKLLLQEGEKLVLVWLDTPY----NQAVYGLVDKLG 278
N ++++L + F Q K +L EGEK V+ +P QA Y +V+ LG
Sbjct: 254 FNPNGKHFNRELQTLTLSFVKQGVLKQILTEGEKYVMS--VSPVLSFGEQATYDVVNNLG 311
Query: 279 SLVVRMVFLPFEESSYATFARSAS-----GQYPQKSKKIGNSLAEALKL-VLLIGM--FF 330
S+ R +F P E+SSY F ++ S + PQ+ + +S+ L L V IG+ F
Sbjct: 312 SMAARFIFRPIEDSSYFYFTQTLSRDIKLAKQPQERVRQASSVLNNLLLGVSSIGLIAFT 371
Query: 331 IELKFSLPI 339
+S P+
Sbjct: 372 FGQSYSYPV 380
>sp|O94302|RFT1_SCHPO Oligosaccharide translocation protein rft1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rft1 PE=3 SV=1
Length = 527
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 145/323 (44%), Gaps = 26/323 (8%)
Query: 26 SRGIPFVFNSWIVRHLTEADYAIYAVQFHLFVTCVLFLSREGFRRACMR---ADIKCDGA 82
SR + F N +R + + YA ++ F + + +LFLSRE R A R +
Sbjct: 25 SRILTFFLNQLTIRLTSPSAYAFSSIHFEILQSTILFLSRESVRLAMQRIPSENAIITST 84
Query: 83 SREENAAKLL--------KVAWLTLPLGIFITIGACFFVLWWQGLSYSN-PYAQA-IFIN 132
S E N +K L + +++ +GI I++ F + S N PY++ IFI
Sbjct: 85 STESNKSKKLSDQLQLIKNTSLISVYIGIVISLLVSLFYFY----SLPNFPYSKTCIFIY 140
Query: 133 GFACVLELLAEPLYILSQNLLLLRLRLVVETVATF-SRCFTMCILIVKQYEMEKGIVFAL 191
+ +ELL+EP Y + Q E + T + I ++ + + + FAL
Sbjct: 141 TVSSFIELLSEPYYEVLQWRQKFSKTASAEGLGTIICSLLSFAISVLGRNKAPSSLPFAL 200
Query: 192 SQVAYAASLFLGYWGYFLLFGAFKTSDLFPFRLGNMMSY---DKQLANMCTLFTFQSFRK 248
++ ++F + L + A + +F ++G Y D + T+Q K
Sbjct: 201 GNLSEKVTIF-----FTLRYFAKQPFSIFLHKVGENERYIFWDSSTLRIICSHTYQVLLK 255
Query: 249 LLLQEGEKLVLVWLDTPYNQAVYGLVDKLGSLVVRMVFLPFEESSYATFARSASGQYPQK 308
L+ +G+K+++ W +P Q Y L GSL+ R+VF P E+ S+ FA+ + +
Sbjct: 256 HLITKGDKIMVAWYASPSAQGPYALASNYGSLLARIVFRPVEDHSHIVFAQLTHYKNKKD 315
Query: 309 SKKIGNSLAEALKLVLLIGMFFI 331
KK N LA LKL + +F +
Sbjct: 316 EKKALNLLAWILKLYSYMSLFIL 338
>sp|Q6FPE8|RFT1_CANGA Oligosaccharide translocation protein RFT1 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=RFT1 PE=3 SV=1
Length = 551
Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 182/384 (47%), Gaps = 67/384 (17%)
Query: 1 MSRAPVDHSTSLSRTFKYLLATQFLSRGIPFVFNSWIVRHLTEADYAIYAVQFHLFVTCV 60
MS A + T+ TF L+ Q S+ + F+ N+ +VR+L+ + I A V V
Sbjct: 1 MSGADILEKTTRGATF--LMMGQLFSKIVTFLLNNTLVRYLSPRIFGITAF-LEFIVGTV 57
Query: 61 LFLSREGFRRACMRADIKCDGASREEN-------AAKLLKVAWLTLPL--GIFITIGACF 111
LF SRE R + R DG + + +A + V + +PL GI ++IG
Sbjct: 58 LFFSREAIRLSTQRI---ADGNDADNDHDHDRDDSALQVCVNFAMIPLFIGIPLSIG--- 111
Query: 112 FVLWWQ-----GLSYSNPYAQ-AIFINGFACVLELLAEPLYILSQNLLLLRLRLVVETVA 165
++ WQ G + P+ Q ++F +LEL+ EPL++L+Q+ L R E++A
Sbjct: 112 -LIAWQYHNINGYFVTLPFFQWSVFAIWVGIILELVNEPLFVLNQHFLNYGARSRYESIA 170
Query: 166 TFSRC---FTMCI-----LIVKQY-----EMEKGIV---FALSQVAYAASLFLGYWGYFL 209
+ C FT+ LI+ Y +GI FAL ++AYAA+L + Y+ +L
Sbjct: 171 VTANCLVNFTVVYSYEKKLILTSYFDDSERFREGIAILAFALGKLAYAATLLMCYYYNYL 230
Query: 210 LFGAFKTSDLFPFRLGNMMSYDKQLANMCTLFTFQS-----FRKL--------LLQEGEK 256
+ FK++ PF+L + K N + F+S F+K+ LL EG+K
Sbjct: 231 M--NFKSNK--PFKLS--LQKIKSKVNEKQTYYFRSDILEHFKKVYFQLCFKHLLTEGDK 284
Query: 257 LVLVWLDTPYNQAVYGLVDKLGSLVVRMVFLPFEESSYATFARSASGQYPQKSKKIGNSL 316
L++ T Q +Y L+ GSL+ R++F P EES A SKK +L
Sbjct: 285 LIINTFCTVEEQGIYSLLSNYGSLITRLLFAPIEESLRLLLAVLL-------SKKDSKNL 337
Query: 317 AEALKLVLLIGMFFIELKFSLPIY 340
++K+++ + F++ L + I+
Sbjct: 338 QLSMKVLVNLTKFYLYLSLLVMIF 361
>sp|P40913|RFT1_KLULA Oligosaccharide translocation protein RFT1 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=RFT1 PE=3 SV=2
Length = 556
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 149/326 (45%), Gaps = 50/326 (15%)
Query: 7 DHSTSLSRTFKYLLATQFLSRGIPFVFNSWIVRHLTEADYAIYAVQFHLFVTCVLFLSRE 66
+H + +L+ Q LS+G+ F+ N+ +VR+L+ + I + ++ VLF SRE
Sbjct: 6 EHMNKFANGVLFLMLGQTLSKGVNFLLNTLLVRYLSPRIFGITSF-LEFLLSTVLFFSRE 64
Query: 67 GFRRACMRADIKCDGASREE--------NAAKLLKVAWLTLPLGIFITIGACFFVLWWQG 118
R + +R D E+ L+ ++ +G+ ++I ++ WQ
Sbjct: 65 SIRISTLRIKSTTDSGKLEKVEDGEDTRTLQSLINFGYIPFVIGLPLSI----ILISWQ- 119
Query: 119 LSYSN--------PYAQA-IFINGFACVLELLAEPLYILSQNLLLLRLRLVVETVATFSR 169
YSN PY +A IF+ + ++EL++EP Y++ Q LL +R E++
Sbjct: 120 --YSNLNSYFIDLPYFKASIFLIWLSILIELVSEPFYLVHQYLLNHFIRSKYESLGVTFA 177
Query: 170 CFTMCILIVKQYEMEKGI----------------VFALSQVAYAASLFLGYWGYFLLFGA 213
C I++V +M G+ FA+ ++ +A +L L + Y
Sbjct: 178 CVANFIIVVWFEKMVNGVGLELHDDYKQEGIAIFAFAVGKLVHAMTL-LACYSYNYYSEV 236
Query: 214 FKTSDLFPFRLGNMMSYDKQLANMCTLFTFQSFRKL--------LLQEGEKLVLVWLDTP 265
+ T + + ++L + +Q + T Q F+K+ LL EG+KL++ L T
Sbjct: 237 YTTGERYSYKLTKIRPETRQESYYFQNDTVQHFKKVYFQLCFKHLLTEGDKLIINSLCTV 296
Query: 266 YNQAVYGLVDKLGSLVVRMVFLPFEE 291
Q +Y L+ GSL+ R++F P EE
Sbjct: 297 EEQGIYSLLSNYGSLITRLLFAPIEE 322
>sp|P38206|RFT1_YEAST Oligosaccharide translocation protein RFT1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RFT1 PE=1
SV=1
Length = 574
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 152/351 (43%), Gaps = 72/351 (20%)
Query: 18 YLLATQFLSRGIPFVFNSWIVRHLTEADYAIYAVQFHLFVT-CVLFLSREGFRRACMRAD 76
+L+ Q ++ + F+ N+ ++R L+ + I A F F+ VLF SR+ R + +R
Sbjct: 25 FLMMGQLFTKLVTFILNNLLIRFLSPRIFGITA--FLEFIQGTVLFFSRDAIRLSTLRIS 82
Query: 77 IKCDGA---------SREENAAKLLKVA--------WLTLPLGI------FITIGACFFV 113
+G +K+L+ A W+ PL I + I A F
Sbjct: 83 DSGNGIIDDDDEEEYQETHYKSKVLQTAVNFAYIPFWIGFPLSIGLIAWQYRNINAYFIT 142
Query: 114 LWWQGLSYSNPYAQ-AIFINGFACVLELLAEPLYILSQNLLLLRLRLVVETVATFSRCFT 172
L P+ + +IF+ + ++ELL+EP +I++Q +L R E++A + C
Sbjct: 143 L---------PFFRWSIFLIWLSIIVELLSEPFFIVNQFMLNYAARSRFESIAVTTGCIV 193
Query: 173 MCILI--VKQYEMEKGIV-------------FALSQVAYAASLFLGY-WGYFLLFGAFKT 216
I++ V+Q G+V FAL ++A++ +L Y W Y FK
Sbjct: 194 NFIVVYAVQQSRYPMGVVTSDIDKEGIAILAFALGKLAHSITLLACYYWDYL---KNFKP 250
Query: 217 SDLFPFRLGNMMS---------YDKQLANMCTLFTFQSFRKL--------LLQEGEKLVL 259
LF RL + + Y K + Q F+K+ LL EG+KL++
Sbjct: 251 KKLFSTRLTKIKTRENNELKKGYPKSTSYFFQNDILQHFKKVYFQLCFKHLLTEGDKLII 310
Query: 260 VWLDTPYNQAVYGLVDKLGSLVVRMVFLPFEESSYATFARSASGQYPQKSK 310
L T Q +Y L+ GSL+ R++F P EES AR S P+ K
Sbjct: 311 NSLCTVEEQGIYALLSNYGSLLTRLLFAPIEESLRLFLARLLSSHNPKNLK 361
>sp|Q754Q7|RFT1_ASHGO Oligosaccharide translocation protein RFT1 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=RFT1 PE=3 SV=1
Length = 552
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 143/322 (44%), Gaps = 36/322 (11%)
Query: 18 YLLATQFLSRGIPFVFNSWIVRHLTEADYAIYAVQFHLFVTCVLFLSREGFRRACMRADI 77
+L+ Q + + FV ++ +VR L+ + I + + VLF SRE R A +R
Sbjct: 18 FLMMGQLFGKLVTFVLHNVLVRFLSPRIFGITSF-LDFLSSTVLFFSREAIRLATLRIKT 76
Query: 78 KCDGASREENAAKL-LKVAWLTLPLGIFITIGACFFVLWWQGLSYSNPYAQ------AIF 130
DG E +A+L V + +P+ I + V WQ + ++ + Q +I+
Sbjct: 77 GGDGGRGGEMSAELQTAVNFANIPMCIGAPLAVVLAV--WQYSNLNSYFTQLPFFSWSIY 134
Query: 131 INGFACVLELLAEPLYILSQNLLLLRLRLVVETVATFSRCFTMCILI------------- 177
+ + + EL +EPLY+++Q +L R R E A + C +I
Sbjct: 135 LVLLSILAELASEPLYVVNQFMLNYRKRSQFEGAAVAASCLVNFAVIYWYENWVNGRGET 194
Query: 178 VKQYEMEKGIV---FALSQVAYAASLFLGYWGYFLLFGAFKTSDLFPFRL------GNMM 228
V ++GI FAL +VA A +L Y+ ++ A + LF L G++
Sbjct: 195 VHDSYKQEGIAVLAFALGKVARAMTLLALYYVDYVRHLAHE--KLFSLSLTKVRVPGSVY 252
Query: 229 S--YDKQLANMCTLFTFQSFRKLLLQEGEKLVLVWLDTPYNQAVYGLVDKLGSLVVRMVF 286
+ +D + FQ K LL EG+KL++ L T Q +Y L+ GSL+ RMVF
Sbjct: 253 TAYFDSDVLQHFKKVYFQLCFKHLLTEGDKLIINSLCTVEEQGIYSLLSNYGSLITRMVF 312
Query: 287 LPFEESSYATFARSASGQYPQK 308
P EES R S + Q
Sbjct: 313 APIEESLLLFLTRLLSDKTQQN 334
>sp|Q23444|RFT1_CAEEL Protein RFT1 homolog OS=Caenorhabditis elegans GN=ZK180.3 PE=3 SV=1
Length = 522
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 162/359 (45%), Gaps = 79/359 (22%)
Query: 23 QFLSRGIPFVFNSWIVRHLTEADYAIYAVQFHLFVTCVLFLSREGFRRA-CMRADIKCDG 81
Q ++R I F N +++R + + V+ L + +LFL+RE R+A +R +
Sbjct: 14 QLIARIISFAINMYLLRRINNDVLGLVNVRLTLLYSSILFLTREPLRKAEIIRGSLP--- 70
Query: 82 ASREENAAKLLKVAWLTLPLGIFITIGACFFVLWWQGLSYSNPYAQAIFIN-GFACVLEL 140
K + + WL+ + I++ C + LW+ S S+ + ++ ++ + ++E
Sbjct: 71 --------KFINLLWLSPIISTVISV-VCVY-LWYAFSSTSDEVSWSVLLSFPISAIIES 120
Query: 141 LAEPLYILSQNLLLLRLRLVVETVATFSRCFTMCILIVKQYEMEKGIVFALSQVAYAASL 200
+AEP ++S LRL S+C ++ + + + +G++ + ++ A L
Sbjct: 121 IAEPFSVIS-----LRLE---------SKCGSLA----QHFAIGQGMLICVKRIFVLAGL 162
Query: 201 FL----------GYWGY-----FLLFG-----------------AFKT-SDLFPFRLGNM 227
F+ Y Y +LLF F T SDLFP +
Sbjct: 163 FMFPGMYHLELFAYAQYIGAIAYLLFNFVAFYIYIRNKSIPELEQFSTFSDLFP-KFSEG 221
Query: 228 MSYDKQLANMCTLFTFQSFRKLLLQEGEKLVLVWLD--TPYNQAVYGLVDKLGSLVVRMV 285
+ D A + T+F+ S K LL +G V+ + + + +QAVY V+++GS++VR +
Sbjct: 222 IDRDSIHA-VFTMFS-HSILKQLLTDGSAYVMTFTELLSLKDQAVYDAVERVGSIIVRTI 279
Query: 286 FLPFEESSYATFARSASGQYPQKSKKIGN------SLAEALKLVLLIGMFFIELKFSLP 338
P +E+ A F+ + + +K N +L++ L +V +IG F+ F +P
Sbjct: 280 LSPIDENCNAYFSNTIRKESSVFNKNTDNHDDLVDTLSKVLHVVGVIG--FVACTFGIP 336
>sp|Q6C6S3|RFT1_YARLI Oligosaccharide translocation protein RFT1 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=RFT1 PE=3 SV=1
Length = 673
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 139/329 (42%), Gaps = 45/329 (13%)
Query: 19 LLATQFLSRGIPFVFNSWIVRHLTEADYAIYAVQFHLFVTCVLFLSREGFRRACMR---A 75
L+ Q LS+ F N ++ T A + A Q + VLF SRE R A R A
Sbjct: 110 LIGIQILSKLASFGLNQMLLLVATPALFGANA-QLEFVLNTVLFFSREAVRLALQRLTLA 168
Query: 76 DIKCD-----GASREENAA----KLLKVAWLTLPLGIFIT-IGACFFVLWWQGLSYSNPY 125
K D G ++ + ++ + ++++ LG+F + + A L+ ++Y++
Sbjct: 169 GKKPDVYVFGGGVVQDTVSGTSQAVINMGYISVLLGVFFSSVAAASHSLF--SVAYASWA 226
Query: 126 AQAIFINGFACVLELLAEPLYILSQNLLLLRLRLVVETVATFSRCFTMCILIVKQYEMEK 185
Q + I A +++L +EP Y+L+ L R R E VA RC + + +
Sbjct: 227 VQLVCI---AAMVDLASEPYYVLAMQQLRFRSRAAAEAVAILVRCVVTFSFTLLAKDTDG 283
Query: 186 G-----IVFALSQVAY-----AASLFLGYWGYFLLFGAFKTSDLFPFRLGNMMS------ 229
G + FA Q+AY A ++ +F+ + PF MS
Sbjct: 284 GLNGGVLAFAFGQLAYSLISSAVYIYTVRQDNRDRQFSFRPQKIQPFESQMEMSDNNRDV 343
Query: 230 ---------YDKQLANMCTLFTFQSFRKLLLQEGEKLVLVWLDTPYNQAVYGLVDKLGSL 280
DK + Q+ K L EG+++++ + Y+Q VY +V GSL
Sbjct: 344 ITHNASPYYLDKPTVRLAGSIWIQTVFKHCLTEGDRILVSYFLPLYDQGVYAIVLNYGSL 403
Query: 281 VVRMVFLPFEESSYATFARSASGQYPQKS 309
V R+VF P EE TF + G+ P ++
Sbjct: 404 VARIVFFPIEE-GLRTFFSNLLGEKPSET 431
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.142 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,422,670
Number of Sequences: 539616
Number of extensions: 4470866
Number of successful extensions: 12547
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 12491
Number of HSP's gapped (non-prelim): 22
length of query: 360
length of database: 191,569,459
effective HSP length: 119
effective length of query: 241
effective length of database: 127,355,155
effective search space: 30692592355
effective search space used: 30692592355
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 62 (28.5 bits)