BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018172
(360 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3BWN|A Chain A, L-Tryptophan Aminotransferase
pdb|3BWN|B Chain B, L-Tryptophan Aminotransferase
pdb|3BWN|D Chain D, L-Tryptophan Aminotransferase
pdb|3BWN|E Chain E, L-Tryptophan Aminotransferase
pdb|3BWN|F Chain F, L-Tryptophan Aminotransferase
Length = 391
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 209/353 (59%), Positives = 266/353 (75%), Gaps = 8/353 (2%)
Query: 2 AFEAFWRKLGDKCTMVISGSDLMSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRH 61
A+E +WRK+GD+CT+ I G DLMSY SDM N+CWFL PEL +AI +LH VV NA ++ R+
Sbjct: 34 AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGVVGNAATEDRY 93
Query: 62 IVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDANTF 121
IV+GTGSTQL QAA++ALSS +P+SVV+AAP+YS Y ET Y+RSG+YKW+GDA F
Sbjct: 94 IVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAWGF 153
Query: 122 DKNNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIM 181
DK G YIE+V SPNNPDGTIRE V+ + + E K+IHD AYYWP YTPIT DHDIM
Sbjct: 154 DK-KGPYIELVTSPNNPDGTIRETVVNRPD-DDEAKVIHDFAYYWPHYTPITRRQDHDIM 211
Query: 182 LFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSD--- 238
LFT SK TGHAGSRIGWALVKD EVA+KM +I + SIGVSKESQ+R AKIL ++ +
Sbjct: 212 LFTFSKITGHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCK 271
Query: 239 ---DYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLE 295
+ NFF+YGR +M RW LR+V+++S F LP+YP +CN+ GK S+P FAWL
Sbjct: 272 SESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLG 331
Query: 296 SKEDEDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQ 348
+KE+ D LR ++M+R G R G+D K+ RVSMLSRE++FN+FLERL+ ++
Sbjct: 332 TKEETDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSREDVFNVFLERLANMK 384
>pdb|3BWN|C Chain C, L-Tryptophan Aminotransferase
pdb|3BWO|A Chain A, L-Tryptophan Aminotransferase
pdb|3BWO|B Chain B, L-Tryptophan Aminotransferase
pdb|3BWO|C Chain C, L-Tryptophan Aminotransferase
pdb|3BWO|D Chain D, L-Tryptophan Aminotransferase
pdb|3BWO|E Chain E, L-Tryptophan Aminotransferase
pdb|3BWO|F Chain F, L-Tryptophan Aminotransferase
Length = 391
Score = 443 bits (1139), Expect = e-125, Method: Compositional matrix adjust.
Identities = 208/353 (58%), Positives = 265/353 (75%), Gaps = 8/353 (2%)
Query: 2 AFEAFWRKLGDKCTMVISGSDLMSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRH 61
A+E +WRK+GD+CT+ I G DLMSY SDM N+CWFL PEL +AI +LH VV NA ++ R+
Sbjct: 34 AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGVVGNAATEDRY 93
Query: 62 IVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDANTF 121
IV+GTGSTQL QAA++ALSS +P+SVV+AAP+YS Y ET Y+RSG+YKW+GDA F
Sbjct: 94 IVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAWGF 153
Query: 122 DKNNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIM 181
DK G YIE+V SPNNPDGTIRE V+ + + E K+IHD AYYWP YTPIT DHDIM
Sbjct: 154 DK-KGPYIELVTSPNNPDGTIRETVVNRPD-DDEAKVIHDFAYYWPHYTPITRRQDHDIM 211
Query: 182 LFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSD--- 238
LFT S TGHAGSRIGWALVKD EVA+KM +I + SIGVSKESQ+R AKIL ++ +
Sbjct: 212 LFTFSXITGHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCK 271
Query: 239 ---DYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLE 295
+ NFF+YGR +M RW LR+V+++S F LP+YP +CN+ GK S+P FAWL
Sbjct: 272 SESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLG 331
Query: 296 SKEDEDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQ 348
+KE+ D LR ++M+R G R G+D K+ RVSMLSRE++FN+FLERL+ ++
Sbjct: 332 TKEETDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSREDVFNVFLERLANMK 384
>pdb|1LK9|A Chain A, The Three-Dimensional Structure Of Alliinase From Garlic
pdb|1LK9|B Chain B, The Three-Dimensional Structure Of Alliinase From Garlic
Length = 448
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/361 (35%), Positives = 191/361 (52%), Gaps = 26/361 (7%)
Query: 1 MAFEAFWRKLGDKCTMVISGSDLMSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGR 60
+ E +W++ + +++S MSY V F+ EL + I LH VV NA + R
Sbjct: 67 LFLEEYWKQHKEASAVLVSPWHRMSYF--FNPVSNFISFELEKTIKELHEVVGNAAAKDR 124
Query: 61 HIVIGTGSTQLYQAALYALS-----SPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWD 115
+IV G G TQL + +LS +P PE VV+ AP+Y + +T Y Y W
Sbjct: 125 YIVFGVGVTQLIHGLVISLSPNMTATPDAPES-KVVAHAPFYPVFREQTKYFDKKGYVWA 183
Query: 116 GDANTFDK--NNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYWPQYTPIT 173
G+A + N YIE+V SPNNP+G +R AV+ K I+D+ YYWP YTPI
Sbjct: 184 GNAANYVNVSNPEQYIEMVTSPNNPEGLLRHAVIKGC------KSIYDMVYYWPHYTPIK 237
Query: 174 GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKIL 233
AD DI+LFT+SK TGH+GSR GWAL+KD V + ++ + G +E+QLR+ K+L
Sbjct: 238 YKADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVL 297
Query: 234 GIV-------SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPL-EYCNFTGKFT 285
V + +G + + ERW + ++ QS F E P EYCN+ +
Sbjct: 298 KEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMR 357
Query: 286 NSHPGFAWL--ESKEDEDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLER 343
P +AW+ E +ED+DC + + RI + G F A ++Y R+S++ ++ F+ +
Sbjct: 358 PPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDFDQLMYY 417
Query: 344 L 344
L
Sbjct: 418 L 418
>pdb|2HOR|A Chain A, Crystal Structure Of Alliinase From Garlic- Apo Form
pdb|2HOX|A Chain A, Alliinase From Allium Sativum (Garlic)
pdb|2HOX|B Chain B, Alliinase From Allium Sativum (Garlic)
pdb|2HOX|C Chain C, Alliinase From Allium Sativum (Garlic)
pdb|2HOX|D Chain D, Alliinase From Allium Sativum (Garlic)
Length = 427
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/361 (35%), Positives = 191/361 (52%), Gaps = 26/361 (7%)
Query: 1 MAFEAFWRKLGDKCTMVISGSDLMSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGR 60
+ E +W++ + +++S MSY V F+ EL + I LH VV NA + R
Sbjct: 67 LFLEEYWKQHKEASAVLVSPWHRMSYF--FNPVSNFISFELEKTIKELHEVVGNAAAKDR 124
Query: 61 HIVIGTGSTQLYQAALYALS-----SPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWD 115
+IV G G TQL + +LS +P PE VV+ AP+Y + +T Y Y W
Sbjct: 125 YIVFGVGVTQLIHGLVISLSPNMTATPDAPES-KVVAHAPFYPVFREQTKYFDKKGYVWA 183
Query: 116 GDANTFDK--NNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYWPQYTPIT 173
G+A + N YIE+V SPNNP+G +R AV+ K I+D+ YYWP YTPI
Sbjct: 184 GNAANYVNVSNPEQYIEMVTSPNNPEGLLRHAVIKGC------KSIYDMVYYWPHYTPIK 237
Query: 174 GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKIL 233
AD DI+LFT+SK TGH+GSR GWAL+KD V + ++ + G +E+QLR+ K+L
Sbjct: 238 YKADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVL 297
Query: 234 GIV-------SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPL-EYCNFTGKFT 285
V + +G + + ERW + ++ QS F E P EYCN+ +
Sbjct: 298 KEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMR 357
Query: 286 NSHPGFAWL--ESKEDEDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLER 343
P +AW+ E +ED+DC + + RI + G F A ++Y R+S++ ++ F+ +
Sbjct: 358 PPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDFDQLMYY 417
Query: 344 L 344
L
Sbjct: 418 L 418
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 31/187 (16%)
Query: 41 LAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY 100
+AE +NN H NA D + G ++ AL+S E I++ APY+ +Y
Sbjct: 85 IAEFLNNTHGTHFNA--DNLYXTXGAAAS--LSICFRALTSDAYDEFITI---APYFPEY 137
Query: 101 PAETDYLRSGLYKWDGDANTFDKNNGAYIE---------VVNSPNNPDGTI-REAVLAKV 150
+ + L + D F + A E ++NSPNNP GT+ E + K+
Sbjct: 138 KVFVNAAGARLVEVPADTEHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKL 197
Query: 151 NRSAEGK---------LIHDLAYYWPQYTPI-----TGAADHDIMLFTLSKCTGHAGSRI 196
+ E K +I D Y Y I T D+ ++ ++ SK G RI
Sbjct: 198 SDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERI 257
Query: 197 GWALVKD 203
G+ LV D
Sbjct: 258 GYVLVPD 264
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 104/251 (41%), Gaps = 46/251 (18%)
Query: 117 DANTFDKNNGAYIEVVNSPNNPDGT-----IREAVLAKVNRSAEGKLIHDLAY------- 164
D+ DK Y+ PNNP G+ + + +AK + + K++HD AY
Sbjct: 175 DSQIIDKTKLIYL---TYPNNPTGSTATKEVFDEAIAKF-KGTDTKIVHDFAYGAFGFDA 230
Query: 165 YWPQYTPITGAADHDIMLFTLSKCTGHAGSRIGWAL-VKD-TEVARKMTRFIELGSIGVS 222
P D I +++LSK +G R+G+A+ KD + +K G G
Sbjct: 231 KNPSILASENGKDVAIEIYSLSKGYNXSGFRVGFAVGNKDXIQALKKYQTHTNAGXFGAL 290
Query: 223 KESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTG 282
+++ + A + Y +F E + R + + ++ LP
Sbjct: 291 QDAAIYAL-------NHYDDFLEEQSNVFKTRRDRFEAXLAKA---DLP----------- 329
Query: 283 KFTNSHPG-FAWLESKEDEDCEK----LLRAERIMARGGRRFGADA-KYARVSMLSREEI 336
F ++ G + WLE+ D E+ L++ + I+ G+ FG + +Y R+S+ ++
Sbjct: 330 -FVHAKGGIYVWLETPPGYDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQK 388
Query: 337 FNIFLERLSAI 347
+ RL+ +
Sbjct: 389 LDEAAIRLTEL 399
>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|C Chain C, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|D Chain D, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
Length = 354
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 125 NGAYIEVVNSPNNPDGTIREAVLAK---VNRSAEGKLIHDLAYYW----PQY---TP-IT 173
+G I + +PNNP GTI A + + ++ A I D AY P++ +P IT
Sbjct: 140 SGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTXFIVDEAYAEFVNDPRFRSISPXIT 199
Query: 174 GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVA 207
A++ I+L T SK AG R+G+A+ T +A
Sbjct: 200 QGAENIILLKTFSKIHAXAGXRVGYAVAHPTVIA 233
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 73/169 (43%), Gaps = 25/169 (14%)
Query: 60 RHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY-PAETDYLRSGL--YKWDG 116
R + GS + L AL+ P E + ++ Y S + A LR+ L + DG
Sbjct: 88 REALALIGSQEGLAHLLLALTEP---EDLLLLPEVAYPSYFGAARVASLRTFLIPLREDG 144
Query: 117 DANTFDKNNGAYIE----VVNSPNNPDGTI------REAVLAKVNRSAEGKLIHDLAYY- 165
A+ G + E ++N PNNP G + EA+ + R LIHD Y
Sbjct: 145 LADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEAL--GLARKHGLWLIHDNPYVD 202
Query: 166 ------WPQYTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVAR 208
P + GA + + LF+LSK AG R+G+AL + +AR
Sbjct: 203 QVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALAR 251
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 70/181 (38%), Gaps = 23/181 (12%)
Query: 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYY 97
+PEL EA+ + ++ G +Q A+ PG V+ +PY+
Sbjct: 70 IPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGD----EVIVLSPYW 125
Query: 98 SQYP----------AETDYLRSGLYKWDGDANTFDKNNGAYIEVVNSPNNPDGTI--REA 145
YP E + L + D + VVNSPNNP G + +E
Sbjct: 126 VSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEV 185
Query: 146 V--LAKVNRSAEGKLIHD-----LAYYWPQYTPITGAADHDIMLFTLSKCTGHAGSRIGW 198
+ LA++ + L+ D L Y ++P A +H + + +K G RIG+
Sbjct: 186 LEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGY 245
Query: 199 A 199
A
Sbjct: 246 A 246
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 70/181 (38%), Gaps = 23/181 (12%)
Query: 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYY 97
+PEL EA+ + ++ G +Q A+ PG V+ +PY+
Sbjct: 70 IPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGD----EVIVLSPYW 125
Query: 98 SQYP----------AETDYLRSGLYKWDGDANTFDKNNGAYIEVVNSPNNPDGTI--REA 145
YP E + L + D + VVNSPNNP G + +E
Sbjct: 126 VSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEV 185
Query: 146 V--LAKVNRSAEGKLIHD-----LAYYWPQYTPITGAADHDIMLFTLSKCTGHAGSRIGW 198
+ LA++ + L+ D L Y ++P A +H + + +K G RIG+
Sbjct: 186 LEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGY 245
Query: 199 A 199
A
Sbjct: 246 A 246
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 70/181 (38%), Gaps = 23/181 (12%)
Query: 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYY 97
+PEL EA+ + ++ G +Q A+ PG V+ +PY+
Sbjct: 70 IPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGD----EVIVLSPYW 125
Query: 98 SQYP----------AETDYLRSGLYKWDGDANTFDKNNGAYIEVVNSPNNPDGTI--REA 145
YP E + L + D + VVNSPNNP G + +E
Sbjct: 126 VSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEV 185
Query: 146 V--LAKVNRSAEGKLIHD-----LAYYWPQYTPITGAADHDIMLFTLSKCTGHAGSRIGW 198
+ LA++ + L+ D L Y ++P A +H + + +K G RIG+
Sbjct: 186 LEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGY 245
Query: 199 A 199
A
Sbjct: 246 A 246
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 70/181 (38%), Gaps = 23/181 (12%)
Query: 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYY 97
+PEL EA+ + ++ G +Q A+ PG V+ +PY+
Sbjct: 70 IPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGD----EVIVLSPYW 125
Query: 98 SQYP----------AETDYLRSGLYKWDGDANTFDKNNGAYIEVVNSPNNPDGTI--REA 145
YP E + L + D + VVNSPNNP G + +E
Sbjct: 126 VSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEV 185
Query: 146 V--LAKVNRSAEGKLIHD-----LAYYWPQYTPITGAADHDIMLFTLSKCTGHAGSRIGW 198
+ LA++ + L+ D L Y ++P A +H + + +K G RIG+
Sbjct: 186 LEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGY 245
Query: 199 A 199
A
Sbjct: 246 A 246
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 81/186 (43%), Gaps = 34/186 (18%)
Query: 43 EAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP- 101
E + + +H + A + + +++ +G +Q + L L++PG +++ P +S Y
Sbjct: 80 EEVASYYHCPE-APLEAKDVILTSGCSQAIELCLAVLANPGQ----NILIPRPGFSLYRT 134
Query: 102 -AETDYLRSGLYK------WDGDANTFDK--NNGAYIEVVNSPNNPDGTI-----REAVL 147
AE+ + LY W+ D + + VVN+P+NP G++ + +L
Sbjct: 135 LAESMGIEVKLYNLLPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKIL 194
Query: 148 AKVNRSA----EGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCTGHA------GSRIG 197
A R ++ D+ + +Y P+ + + +L C G A G R+G
Sbjct: 195 AVAERQCVPILADEIYGDMVFSDCKYEPMATLSTNVPIL----SCGGLAXRWLVPGWRLG 250
Query: 198 WALVKD 203
W L+ D
Sbjct: 251 WILIHD 256
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 69/181 (38%), Gaps = 23/181 (12%)
Query: 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYY 97
+PEL EA+ + ++ G Q A+ PG V+ +PY+
Sbjct: 70 IPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGD----EVIVLSPYW 125
Query: 98 SQYP----------AETDYLRSGLYKWDGDANTFDKNNGAYIEVVNSPNNPDGTI--REA 145
YP E + L + D + VVNSPNNP G + +E
Sbjct: 126 VSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEV 185
Query: 146 V--LAKVNRSAEGKLIHD-----LAYYWPQYTPITGAADHDIMLFTLSKCTGHAGSRIGW 198
+ LA++ + L+ D L Y ++P A +H + + +K G RIG+
Sbjct: 186 LEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGY 245
Query: 199 A 199
A
Sbjct: 246 A 246
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 92/228 (40%), Gaps = 38/228 (16%)
Query: 131 VVNSPNNPDGTI-REAVLAKVNRSAEGK---LIHDLAY----YWPQYTPITGAA---DHD 179
++NSPNNP G + R L + R A+ + +I D Y Y ++T I + D
Sbjct: 179 LINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRI 238
Query: 180 IMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDD 239
+ + SK G R+G+ L+ +VA +++ + ++ +Q A K L + +
Sbjct: 239 VYINGFSKSHSMTGWRVGY-LISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVDNS- 296
Query: 240 YPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED 299
Y + ER N + + +++ GV KF F
Sbjct: 297 ------YMVQTFKERKNFVVERLKKMGV---------------KFVEPEGAFYLFFKVRG 335
Query: 300 ED---CEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERL 344
+D CE+LL +++ G F + R+S + E L+R+
Sbjct: 336 DDVKFCERLLEEKKVALVPGSAF-LKPGFVRLSFATSIERLTEALDRI 382
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 36/187 (19%)
Query: 43 EAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP- 101
E I + +H + A + + +++ +G +Q L L++PG +++ P +S Y
Sbjct: 103 EEIASYYHCPE-APLEAKDVILTSGCSQAIDLCLAVLANPGQ----NILVPRPGFSLYKT 157
Query: 102 -AETDYLRSGLYK------WDGDANTFDK--NNGAYIEVVNSPNNPDGTI-----REAVL 147
AE+ + LY W+ D + + +VN+P+NP G++ + +L
Sbjct: 158 LAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKIL 217
Query: 148 AKVNRSA----EGKLIHDLAYYWPQYTPI-TGAADHDIMLFTLSKCTGHA------GSRI 196
A R ++ D+ + +Y P+ T + D I+ C G A G R+
Sbjct: 218 AVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPIL-----SCGGLAKRWLVPGWRL 272
Query: 197 GWALVKD 203
GW L+ D
Sbjct: 273 GWILIHD 279
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 20/169 (11%)
Query: 61 HIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYL------RSGLYKW 114
+++ G+ + + + A PG +++ P Y Y + + L W
Sbjct: 77 QVLVSRGADEGIELLIRAFCEPGKD---AILYCPPTYGMYSVSAETIGVECRTVPTLDNW 133
Query: 115 DGDANTF-DKNNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAY--YWP 167
D DK +G + V SPNNP G + L ++ R + ++ D AY + P
Sbjct: 134 QLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCP 192
Query: 168 QYTPITGAAD--HDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFI 214
Q + A+ H +L TLSK AG R G+ L + EV + + I
Sbjct: 193 QASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE-EVINLLMKVI 240
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 20/169 (11%)
Query: 61 HIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYL------RSGLYKW 114
+++ G+ + + + A PG +++ P Y Y + + L W
Sbjct: 77 QVLVSRGADEGIELLIRAFCEPGKD---AILYCPPTYGXYSVSAETIGVECRTVPTLDNW 133
Query: 115 DGDANTF-DKNNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAY--YWP 167
D DK +G + V SPNNP G + L ++ R + ++ D AY + P
Sbjct: 134 QLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCP 192
Query: 168 QYTPITGAAD--HDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFI 214
Q + A+ H +L TLSK AG R G+ L + EV + + I
Sbjct: 193 QASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE-EVINLLXKVI 240
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 13/115 (11%)
Query: 131 VVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYY------W--PQYTPITGAADH 178
++ P+NP E + + + + ++HDLAY W P + GA D
Sbjct: 177 ILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDI 236
Query: 179 DIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKIL 233
+ FTLSK AG RIG+ +V + E+ + R G Q+ A L
Sbjct: 237 AVEFFTLSKSYNMAGWRIGF-MVGNPELVSALARIKSYHDYGTFTPLQVAAIAAL 290
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 23/181 (12%)
Query: 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYY 97
+PEL EA+ + ++ G Q A+ PG V+ +PY+
Sbjct: 70 IPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGD----EVIVLSPYW 125
Query: 98 SQYP----------AETDYLRSGLYKWDGDANTFDKNNGAYIEVVNSPNNPDGTI--REA 145
YP E + L + D + VVNSPNNP G + +E
Sbjct: 126 VSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEV 185
Query: 146 V--LAKVNRSAEGKLIHD-----LAYYWPQYTPITGAADHDIMLFTLSKCTGHAGSRIGW 198
+ LA++ + L+ D L Y ++P A +H + + + G RIG+
Sbjct: 186 LEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAXAFAMTGWRIGY 245
Query: 199 A 199
A
Sbjct: 246 A 246
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 14/141 (9%)
Query: 105 DYLRSGLYKWDG-DANTFDKNNGAYIEVVNSPNNPDG----TIREAVLAKVNRSAEGKLI 159
D LR L +W DA KN ++ V + NNP G + R+ + ++ R + +I
Sbjct: 169 DSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLII 228
Query: 160 HDLAYYWPQY----TPITGAADHD---IMLFTLSKCTGHAGSRIGWALVKDTEVARKMTR 212
D YY+ Q+ P + D D I + SK +G RIG+ L + ++
Sbjct: 229 EDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGF-LTGPKPLIERVIL 286
Query: 213 FIELGSIGVSKESQLRAAKIL 233
I++ ++ S +QL +++L
Sbjct: 287 HIQVSTLHPSTFNQLMISQLL 307
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 14/141 (9%)
Query: 105 DYLRSGLYKWDG-DANTFDKNNGAYIEVVNSPNNPDG----TIREAVLAKVNRSAEGKLI 159
D LR L +W DA KN ++ V + NNP G + R+ + ++ R + +I
Sbjct: 169 DSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLII 228
Query: 160 HDLAYYWPQY----TPITGAADHD---IMLFTLSKCTGHAGSRIGWALVKDTEVARKMTR 212
D YY+ Q+ P + D D I + SK +G RIG+ L + ++
Sbjct: 229 EDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGF-LTGPKPLIERVIL 286
Query: 213 FIELGSIGVSKESQLRAAKIL 233
I++ ++ S +QL +++L
Sbjct: 287 HIQVSTLHPSTFNQLMISQLL 307
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 14/141 (9%)
Query: 105 DYLRSGLYKWDG-DANTFDKNNGAYIEVVNSPNNPDG----TIREAVLAKVNRSAEGKLI 159
D LR L +W DA KN ++ V + NNP G + R+ + ++ R + +I
Sbjct: 169 DSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLII 228
Query: 160 HDLAYYWPQY----TPITGAADHD---IMLFTLSKCTGHAGSRIGWALVKDTEVARKMTR 212
D YY+ Q+ P + D D I + SK +G RIG+ L + ++
Sbjct: 229 EDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGF-LTGPKPLIERVIL 286
Query: 213 FIELGSIGVSKESQLRAAKIL 233
I++ ++ S +QL +++L
Sbjct: 287 HIQVSTLHPSTFNQLMISQLL 307
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 14/141 (9%)
Query: 105 DYLRSGLYKWDG-DANTFDKNNGAYIEVVNSPNNPDG----TIREAVLAKVNRSAEGKLI 159
D LR L +W DA KN ++ V + NNP G + R+ + ++ R + +I
Sbjct: 169 DSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLII 228
Query: 160 HDLAYYWPQY----TPITGAADHD---IMLFTLSKCTGHAGSRIGWALVKDTEVARKMTR 212
D YY+ Q+ P + D D I + SK +G RIG+ L + ++
Sbjct: 229 EDDPYYFLQFNSGRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGF-LTGPKPLIERVIL 286
Query: 213 FIELGSIGVSKESQLRAAKIL 233
I++ ++ S +QL +++L
Sbjct: 287 HIQVSTLHPSTFNQLMISQLL 307
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 34.3 bits (77), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 14/141 (9%)
Query: 105 DYLRSGLYKWDG-DANTFDKNNGAYIEVVNSPNNPDG----TIREAVLAKVNRSAEGKLI 159
D LR L +W DA KN ++ V + NNP G + R+ + ++ R + +I
Sbjct: 169 DSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLII 228
Query: 160 HDLAYYWPQY----TPITGAADHD---IMLFTLSKCTGHAGSRIGWALVKDTEVARKMTR 212
D YY+ Q+ P + D D I + SK +G RIG+ L + ++
Sbjct: 229 EDDPYYFLQFNSGRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGF-LTGPKPLIERVIL 286
Query: 213 FIELGSIGVSKESQLRAAKIL 233
I++ ++ S +QL +++L
Sbjct: 287 HIQVSTLHPSTFNQLMISQLL 307
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 73/183 (39%), Gaps = 23/183 (12%)
Query: 41 LAEAINNLHHVVDNAV--SDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYS 98
+AE HV N V SDG I L A+ P P I
Sbjct: 121 IAETFYRDLHVKSNEVFVSDGAQSDISRLQLLLGSNVTIAVQDPTFPAYIDSSVIIGQTG 180
Query: 99 QYPAETDYLRSGLYKWDGDANTF--DKNNGAYIEVV--NSPNNPDGTI--REAV-----L 147
+ +T ++ +Y G N+F D +V+ SPNNP G + R+ +
Sbjct: 181 HFHEKTKKYQNVVYMPCGPNNSFFPDLAMTPRTDVIFFCSPNNPTGYVASRKQLHQLVDF 240
Query: 148 AKVNRSAEGKLIHDLAY--YWPQYTP-----ITGAADHDIMLFTLSKCTGHAGSRIGWAL 200
AK N S +I D AY + +P I GA + I + + SK G G R+GW++
Sbjct: 241 AKTNGSI---IIFDSAYAAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAGFTGVRLGWSI 297
Query: 201 VKD 203
+ D
Sbjct: 298 IPD 300
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 34/80 (42%), Gaps = 12/80 (15%)
Query: 134 SPNNPDGT--IREAVLAKVN--RSAEGKLIHDLAYYWPQYTP--------ITGAADHDIM 181
SPNNP G R + VN R L++D AY P I GA + I
Sbjct: 217 SPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIE 276
Query: 182 LFTLSKCTGHAGSRIGWALV 201
+ SK G G R+GW +V
Sbjct: 277 TCSFSKYAGFTGVRLGWTVV 296
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 12/140 (8%)
Query: 105 DYLRSGLYKWDG-DANTFDKNNGAYIEVVNSPNNPDG----TIREAVLAKVNRSAEGKLI 159
D LR L +W DA KN ++ V + NNP G + R+ + ++ R + +I
Sbjct: 171 DSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLII 230
Query: 160 HDLAYYWPQY----TPITGAADHDIMLFTLSKCTG--HAGSRIGWALVKDTEVARKMTRF 213
D YY+ Q+ P + D D + + +G RIG+ L + ++
Sbjct: 231 EDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSXIISSGLRIGF-LTGPKPLIERVILH 289
Query: 214 IELGSIGVSKESQLRAAKIL 233
I++ ++ S +QL +++L
Sbjct: 290 IQVSTLHPSTFNQLMISQLL 309
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 12/140 (8%)
Query: 105 DYLRSGLYKWDG-DANTFDKNNGAYIEVVNSPNNPDG----TIREAVLAKVNRSAEGKLI 159
D LR L +W DA KN ++ V + NNP G + R+ + ++ R + +I
Sbjct: 169 DSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLII 228
Query: 160 HDLAYYWPQY----TPITGAADHDIMLFTLSKCTG--HAGSRIGWALVKDTEVARKMTRF 213
D YY+ Q+ P + D D + + +G RIG+ L + ++
Sbjct: 229 EDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSXIISSGLRIGF-LTGPKPLIERVILH 287
Query: 214 IELGSIGVSKESQLRAAKIL 233
I++ ++ S +QL +++L
Sbjct: 288 IQVSTLHPSTFNQLMISQLL 307
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 18/118 (15%)
Query: 134 SPNNPDGT--IREAV--LAKVNRSAEGKLIHDLAY--YWPQYTP-----ITGAADHDIML 182
SPNNP G RE + L + + +++D AY Y P I GA + +
Sbjct: 206 SPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMET 265
Query: 183 FTLSKCTGHAGSRIGWALVKDT-------EVARKMTRFIELGSIGVSKESQLRAAKIL 233
+ SK G G R+GW ++ VA+ R I G S SQ A L
Sbjct: 266 ASFSKYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACL 323
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 97/251 (38%), Gaps = 49/251 (19%)
Query: 121 FDKNNGAYIEVVNSPNNPDGTI--REAVLAKVNRSAEGKLI--HDLAYYWPQYTP----- 171
F ++ I + SPNNP GT+ ++ + A V+ + E +++ D AY P
Sbjct: 158 FPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKS 217
Query: 172 ---ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTE-------VARKMTRFIELGSIGV 221
I A I + + SK G AG R+GW ++ V + RF+ G
Sbjct: 218 IFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGA 277
Query: 222 SKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSG--VFGLPEYPLEYCN 279
S +Q A + G+ Y R E ++LR+ + +G VFG
Sbjct: 278 SIPAQ--EAGVAGLSILPQLEAIHYYR----ENSDLLRKALLATGFEVFG---------- 321
Query: 280 FTGKFTNSHPGFAWLESKE----DEDC-EKLLRAERIMARGGRRFG-ADAKYARVSMLSR 333
H + W++ + D D + LR I G FG + + + R S L +
Sbjct: 322 ------GEHAPYLWVKPTQANISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGK 375
Query: 334 EEIFNIFLERL 344
E ERL
Sbjct: 376 REDILAACERL 386
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 46/118 (38%), Gaps = 18/118 (15%)
Query: 134 SPNNPDGT--IREAV--LAKVNRSAEGKLIHDLAY--YWPQYTP-----ITGAADHDIML 182
SPNNP G RE + L + + +++D AY Y P I GA +
Sbjct: 206 SPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEVAXET 265
Query: 183 FTLSKCTGHAGSRIGWALVKDT-------EVARKMTRFIELGSIGVSKESQLRAAKIL 233
+ SK G G R+GW ++ VA+ R I G S SQ A L
Sbjct: 266 ASFSKYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACL 323
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 18/118 (15%)
Query: 134 SPNNPDGT--IREAV--LAKVNRSAEGKLIHDLAY--YWPQYTP-----ITGAADHDIML 182
SPNNP G RE + L + + +++D AY Y P I GA + +
Sbjct: 206 SPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMET 265
Query: 183 FTLSKCTGHAGSRIGWALVKDT-------EVARKMTRFIELGSIGVSKESQLRAAKIL 233
+ S+ G G R+GW ++ VA+ R I G S SQ A L
Sbjct: 266 ASFSQYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACL 323
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 96/245 (39%), Gaps = 45/245 (18%)
Query: 58 DGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGL------ 111
D H+V+ G+T + ++ L+ PG +V+ PYY + + + R+G+
Sbjct: 93 DPNHLVLTAGATSANETFIFCLADPGE----AVLIPTPYYPGFDRDLKW-RTGVEIVPIH 147
Query: 112 -YKWDGDANTFDKNNGAYIE-----------VVNSPNNPDG-TIREAVLAKVNRSAEGKL 158
+G T AY E +V +P+NP G T+ L + E K
Sbjct: 148 CTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKG 207
Query: 159 IHDL--------AYYWPQYTPITGAADHDI-----MLFTLS-KCTGHAGSRIGWALVKDT 204
IH + A+ P + + ++ ++++LS K G G R+G D
Sbjct: 208 IHLISDEIYSGTAFSSPSFISVMEVLKDEVWQRVHVVYSLSXKDLGLPGFRVGAIYSNDD 267
Query: 205 EVARKMTRFIELGSIGVSKESQLRAAKILGIVSDD--YPNFFEYGRRLMSERWNMLRQVI 262
V T+ G + + L A ++SD N+ + + +R L +
Sbjct: 268 MVVAAATKMSSFGLVSSQTQHLLSA-----MLSDKKLTKNYIAENHKRLKQRQKKLVSGL 322
Query: 263 RQSGV 267
++SG+
Sbjct: 323 QKSGI 327
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 18/118 (15%)
Query: 134 SPNNPDGT--IREAV--LAKVNRSAEGKLIHDLAY--YWPQYTP-----ITGAADHDIML 182
SPNNP G RE + L + + +++D AY Y P I GA + +
Sbjct: 206 SPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMET 265
Query: 183 FTLSKCTGHAGSRIGWALVKDT-------EVARKMTRFIELGSIGVSKESQLRAAKIL 233
+ S G G R+GW ++ VA+ R I G S SQ A L
Sbjct: 266 ASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACL 323
>pdb|4GMO|A Chain A, Crystal Structure Of Syo1
Length = 684
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 282 GKFTNSHPGFAWLESKEDED--CEKLL-----RAERIMARGGRRFGADAKYARVSMLS 332
G N W++ +D C+ +L RA + GG +F DA+YA +++L+
Sbjct: 251 GVLHNVFTSLQWMDHSPGKDGACDAILIPTLTRALEHVVPGGAKFNGDARYANITLLA 308
>pdb|4GMN|A Chain A, Structural Basis Of Rpl5 Recognition By Syo1
Length = 676
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 282 GKFTNSHPGFAWLESKEDED--CEKLL-----RAERIMARGGRRFGADAKYARVSMLS 332
G N W++ +D C+ +L RA + GG +F DA+YA +++L+
Sbjct: 251 GVLHNVFTSLQWMDHSPGKDGACDAILIPTLTRALEHVVPGGAKFNGDARYANITLLA 308
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Query: 131 VVNSPNNPDGTI--RE--AVLAKVNRSAEGKLIHDLAYYWPQY--------TPITGAADH 178
V+N+PNNP G + RE ++A + + + I D Y W Y + G +
Sbjct: 179 VLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWER 238
Query: 179 DIMLFTLSKCTGHAGSRIGWALVKD 203
+ + + K G ++GW L D
Sbjct: 239 TLTIGSAGKTFSATGWKVGWVLGPD 263
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 57/163 (34%), Gaps = 29/163 (17%)
Query: 61 HIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP----------AETDYLRSG 110
+++ G+T+ AA+ L PG V+ P+Y Y + G
Sbjct: 88 EVLVTVGATEAIAAAVLGLVEPGS----EVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDG 143
Query: 111 L-YKWDGDANTFDKNNGAYIEVVNSPNNPDGTIREAV-------------LAKVNRSAEG 156
+ D DA ++NSP+NP G + A L +
Sbjct: 144 RGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYE 203
Query: 157 KLIHDLAYYWPQYTPITGAADHDIMLFTLSKCTGHAGSRIGWA 199
L+ D A + P G A+ I + + + G +IGWA
Sbjct: 204 HLVFDHARHLP-LAGFDGMAERTITISSAAXMFNCTGWKIGWA 245
>pdb|2X5F|A Chain A, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
pdb|2X5F|B Chain B, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
Length = 430
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Query: 124 NNGAYIEVVNSPNNPDG---------TIREAVLAKVNRSAEGKLIHDLAYY 165
N I ++N PNNP G TI EA+ A N+ + + D AYY
Sbjct: 187 NKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYY 237
>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
pdb|3EUC|B Chain B, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
Length = 367
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 60/161 (37%), Gaps = 23/161 (14%)
Query: 56 VSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDY--------- 106
V G +++G GS ++ A + PG V + P + Y +
Sbjct: 82 VPAGXEVLLGNGSDEIISXLALAAARPGA----KVXAPVPGFVXYAXSAQFAGLEFVGVP 137
Query: 107 LRSGLYKWDGDANTFDKNNGAYIEVVNSPNNPDGTIREAV-LAKVNRSAEGKLIHDLAYY 165
LR+ G + I + PNNP G + +A + R+A+G + L
Sbjct: 138 LRADFTLDRGAXLAAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVV 197
Query: 166 WPQYTPITGAA------DHDIMLF--TLSKCTGHAGSRIGW 198
Y P + D +L T+SK G AG R+G+
Sbjct: 198 DEAYQPFAQESWXSRLTDFGNLLVXRTVSKL-GLAGIRLGY 237
>pdb|1VDX|A Chain A, Crystal Structure Of A Pyrococcus Horikoshii Protein With
Similarities To 2'5' Rna-Ligase
Length = 184
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 195 RIGWALVKDTEVARKMTRFI--ELGSIGVSKESQLRAAKILGIVS 237
R+ WA +++ E+ R+M R I EL +G KE A LG V
Sbjct: 88 RVIWAGIENDEIIREMAREIEDELAKLGFKKEGNFVAHITLGRVK 132
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 9/104 (8%)
Query: 132 VNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAA----DHDIMLF 183
V SP NP GT + L + ++ I D Y+ +Y A D ++
Sbjct: 167 VASPANPTGTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVIN 226
Query: 184 TLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQL 227
+ SK G R+GW +V + +V R + R + I SQ+
Sbjct: 227 SFSKYFSXTGWRVGWXVVPEDQV-RVVERIAQNXFICAPHASQV 269
>pdb|3HDO|A Chain A, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
pdb|3HDO|B Chain B, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
Length = 360
Score = 27.7 bits (60), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 12/154 (7%)
Query: 62 IVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP--AETDYLRSGLYKWDGDAN 119
I+ GS ++ + A ++ G E I V P YS Y AE R + GD
Sbjct: 85 IIXANGSDEVLNNLIRAFAAEG--EEIGYVH--PSYSYYGTLAEVQGARVRTFGLTGDFR 140
Query: 120 T--FDKNNGAYIEVVNSPNNPDG-TIREAVLAKVNRSAEGKLIHDLAYY-WPQYTPITGA 175
F + + + +PN P G + + ++ R G L+ D Y + + +
Sbjct: 141 IAGFPERYEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGXLVLDETYAEFAESNALELV 200
Query: 176 ADHD--IMLFTLSKCTGHAGSRIGWALVKDTEVA 207
H+ ++ TLSK AG RIG A+ + +A
Sbjct: 201 RRHENVVVTRTLSKSYSLAGXRIGLAIARPEVIA 234
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,526,145
Number of Sequences: 62578
Number of extensions: 503658
Number of successful extensions: 1272
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 1240
Number of HSP's gapped (non-prelim): 50
length of query: 360
length of database: 14,973,337
effective HSP length: 100
effective length of query: 260
effective length of database: 8,715,537
effective search space: 2266039620
effective search space used: 2266039620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)