Query 018172
Match_columns 360
No_of_seqs 114 out of 1653
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 06:45:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018172.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018172hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0436 Aspartate/tyrosine/aro 100.0 6.1E-50 1.3E-54 373.7 33.7 302 26-351 60-392 (393)
2 PLN00175 aminotransferase fami 100.0 6E-44 1.3E-48 338.2 33.3 298 25-350 85-413 (413)
3 PRK07366 succinyldiaminopimela 100.0 1.1E-43 2.5E-48 334.8 31.4 296 25-348 62-388 (388)
4 PRK08636 aspartate aminotransf 100.0 3.5E-43 7.5E-48 332.8 33.6 299 24-350 64-400 (403)
5 PRK15481 transcriptional regul 100.0 2E-43 4.3E-48 337.3 32.1 296 25-350 115-431 (431)
6 PRK06207 aspartate aminotransf 100.0 2.7E-43 5.8E-48 333.3 32.7 300 25-351 72-403 (405)
7 PRK09147 succinyldiaminopimela 100.0 3.7E-43 8E-48 332.1 32.7 297 23-349 57-395 (396)
8 PRK09148 aminotransferase; Val 100.0 5E-43 1.1E-47 331.6 33.2 300 24-351 61-391 (405)
9 PRK07681 aspartate aminotransf 100.0 5.3E-43 1.1E-47 331.2 32.8 289 30-346 68-384 (399)
10 COG1167 ARO8 Transcriptional r 100.0 2.7E-43 5.8E-48 336.1 30.1 301 24-351 125-456 (459)
11 PLN02187 rooty/superroot1 100.0 1.8E-42 3.9E-47 331.5 34.3 302 25-353 102-441 (462)
12 PRK07324 transaminase; Validat 100.0 7.3E-43 1.6E-47 327.0 30.9 296 25-351 56-371 (373)
13 TIGR03540 DapC_direct LL-diami 100.0 1.4E-42 3.1E-47 326.8 32.5 295 24-346 60-382 (383)
14 PRK09276 LL-diaminopimelate am 100.0 1.6E-42 3.5E-47 326.6 32.1 294 25-346 63-384 (385)
15 PRK08068 transaminase; Reviewe 100.0 1.9E-42 4.2E-47 326.4 32.5 296 24-347 63-386 (389)
16 PRK06348 aspartate aminotransf 100.0 1.4E-42 3.1E-47 326.7 31.4 296 24-347 59-382 (384)
17 PLN00145 tyrosine/nicotianamin 100.0 2.3E-42 5.1E-47 328.5 32.8 302 25-354 88-428 (430)
18 PRK08960 hypothetical protein; 100.0 4E-42 8.7E-47 324.0 33.5 298 25-349 63-386 (387)
19 PRK05839 hypothetical protein; 100.0 2.2E-42 4.7E-47 324.0 31.4 292 23-349 52-373 (374)
20 PRK12414 putative aminotransfe 100.0 4.1E-42 8.9E-47 323.4 32.5 293 25-346 60-383 (384)
21 PRK07682 hypothetical protein; 100.0 2.2E-42 4.7E-47 325.0 30.6 300 24-351 50-377 (378)
22 PLN02450 1-aminocyclopropane-1 100.0 5.3E-42 1.1E-46 328.8 33.7 302 23-352 78-432 (468)
23 PRK05942 aspartate aminotransf 100.0 3.3E-42 7.2E-47 325.2 31.7 295 24-346 66-388 (394)
24 PTZ00377 alanine aminotransfer 100.0 3.8E-42 8.3E-47 332.0 32.5 305 24-352 108-477 (481)
25 PRK07683 aminotransferase A; V 100.0 9.7E-42 2.1E-46 321.2 34.3 300 25-352 59-385 (387)
26 PLN00143 tyrosine/nicotianamin 100.0 8.4E-42 1.8E-46 323.5 33.6 302 24-353 67-407 (409)
27 TIGR03538 DapC_gpp succinyldia 100.0 6.9E-42 1.5E-46 323.1 32.6 297 24-348 57-393 (393)
28 PTZ00433 tyrosine aminotransfe 100.0 1E-41 2.2E-46 323.5 33.2 301 24-352 68-410 (412)
29 TIGR03537 DapC succinyldiamino 100.0 1.3E-41 2.8E-46 316.4 32.4 294 24-346 29-349 (350)
30 PRK08912 hypothetical protein; 100.0 1.3E-41 2.8E-46 320.6 32.7 298 25-350 57-386 (387)
31 PRK07590 L,L-diaminopimelate a 100.0 9.9E-42 2.2E-46 323.4 32.0 296 24-348 69-409 (409)
32 PLN02656 tyrosine transaminase 100.0 2.4E-41 5.3E-46 320.5 34.3 301 24-352 66-405 (409)
33 PRK06855 aminotransferase; Val 100.0 1.9E-41 4.2E-46 322.9 33.5 300 24-350 66-429 (433)
34 PLN02376 1-aminocyclopropane-1 100.0 1.3E-41 2.8E-46 327.2 32.4 302 23-352 86-440 (496)
35 PLN02607 1-aminocyclopropane-1 100.0 3E-41 6.5E-46 321.2 34.2 304 22-353 86-440 (447)
36 PRK06290 aspartate aminotransf 100.0 1.8E-41 4E-46 320.5 32.0 294 25-351 76-406 (410)
37 KOG0257 Kynurenine aminotransf 100.0 9.9E-43 2.2E-47 310.1 21.7 313 23-346 61-415 (420)
38 PRK06107 aspartate aminotransf 100.0 3.4E-41 7.3E-46 319.1 33.5 298 25-351 64-401 (402)
39 PRK13355 bifunctional HTH-doma 100.0 1.8E-41 3.9E-46 329.9 32.5 301 25-351 179-515 (517)
40 PRK06108 aspartate aminotransf 100.0 2.9E-41 6.3E-46 318.0 32.7 298 25-350 55-382 (382)
41 PRK07337 aminotransferase; Val 100.0 3.2E-41 7E-46 318.1 32.6 297 25-348 61-387 (388)
42 PRK07865 N-succinyldiaminopime 100.0 2.9E-41 6.3E-46 315.7 31.9 289 25-345 56-363 (364)
43 PRK07309 aromatic amino acid a 100.0 3.7E-41 8.1E-46 317.6 32.9 299 25-351 61-389 (391)
44 PRK08175 aminotransferase; Val 100.0 2.9E-41 6.3E-46 318.9 32.0 300 24-351 60-390 (395)
45 TIGR01264 tyr_amTase_E tyrosin 100.0 3E-41 6.5E-46 319.5 31.9 298 25-350 67-399 (401)
46 KOG0259 Tyrosine aminotransfer 100.0 3.3E-41 7.2E-46 295.4 29.5 310 23-352 95-435 (447)
47 PRK08361 aspartate aminotransf 100.0 2.7E-41 5.9E-46 318.8 31.3 300 25-350 64-390 (391)
48 PRK05957 aspartate aminotransf 100.0 1E-40 2.3E-45 314.4 33.7 299 25-350 59-385 (389)
49 PRK09082 methionine aminotrans 100.0 3.4E-41 7.4E-46 317.5 29.6 294 25-346 61-385 (386)
50 PLN02231 alanine transaminase 100.0 1.7E-40 3.6E-45 321.3 33.0 305 24-352 161-529 (534)
51 PRK08363 alanine aminotransfer 100.0 2.3E-40 5.1E-45 313.2 32.7 299 25-350 64-394 (398)
52 TIGR03539 DapC_actino succinyl 100.0 1.6E-40 3.4E-45 309.8 31.0 288 25-344 50-356 (357)
53 PRK06425 histidinol-phosphate 100.0 7.1E-41 1.5E-45 309.0 28.0 284 23-348 33-331 (332)
54 PRK07777 aminotransferase; Val 100.0 5.4E-40 1.2E-44 309.6 33.5 298 25-350 55-386 (387)
55 PRK07568 aspartate aminotransf 100.0 4.6E-40 1E-44 311.3 33.0 300 25-352 60-394 (397)
56 COG0079 HisC Histidinol-phosph 100.0 2.9E-40 6.3E-45 303.5 29.6 289 23-350 50-354 (356)
57 TIGR03542 DAPAT_plant LL-diami 100.0 5.5E-40 1.2E-44 310.8 31.3 293 25-348 69-402 (402)
58 PRK09275 aspartate aminotransf 100.0 8E-41 1.7E-45 319.4 25.6 312 26-352 129-519 (527)
59 PRK04781 histidinol-phosphate 100.0 3.6E-40 7.8E-45 307.8 29.4 288 25-349 54-362 (364)
60 PRK07550 hypothetical protein; 100.0 1.2E-39 2.5E-44 307.3 31.6 294 25-347 61-384 (386)
61 PRK09440 avtA valine--pyruvate 100.0 4.6E-40 9.9E-45 313.0 29.0 302 24-352 67-413 (416)
62 TIGR01265 tyr_nico_aTase tyros 100.0 2.5E-39 5.5E-44 306.4 33.0 298 25-350 67-401 (403)
63 PRK09265 aminotransferase AlaT 100.0 2.1E-39 4.6E-44 307.1 32.5 301 25-351 66-402 (404)
64 PRK06358 threonine-phosphate d 100.0 9E-40 1.9E-44 304.1 29.3 285 24-348 48-353 (354)
65 PF04864 Alliinase_C: Allinase 100.0 1.8E-41 3.9E-46 296.1 16.3 342 1-347 9-362 (363)
66 PRK05764 aspartate aminotransf 100.0 4.6E-39 9.9E-44 304.1 33.2 297 25-350 62-391 (393)
67 PRK07908 hypothetical protein; 100.0 4.2E-39 9E-44 299.5 30.7 286 24-349 51-346 (349)
68 PRK01533 histidinol-phosphate 100.0 7.4E-40 1.6E-44 305.4 25.1 279 26-351 60-356 (366)
69 TIGR03801 asp_4_decarbox aspar 100.0 3E-39 6.5E-44 308.2 28.7 314 26-351 123-517 (521)
70 PRK14809 histidinol-phosphate 100.0 3.1E-39 6.6E-44 301.3 28.1 280 25-349 60-356 (357)
71 PRK07392 threonine-phosphate d 100.0 4.6E-39 1E-43 300.3 29.1 285 24-349 51-358 (360)
72 PRK03158 histidinol-phosphate 100.0 5E-39 1.1E-43 300.2 26.7 281 27-347 60-358 (359)
73 PTZ00376 aspartate aminotransf 100.0 6.7E-39 1.4E-43 303.5 27.9 292 24-349 65-402 (404)
74 PRK14807 histidinol-phosphate 100.0 1.2E-38 2.6E-43 296.5 29.0 284 25-348 54-350 (351)
75 PRK06959 putative threonine-ph 100.0 2.3E-38 5E-43 292.6 29.9 271 39-350 56-333 (339)
76 PRK09257 aromatic amino acid a 100.0 1.3E-38 2.9E-43 300.9 28.6 292 24-348 62-396 (396)
77 PRK01688 histidinol-phosphate 100.0 2.9E-39 6.4E-44 300.3 23.3 277 38-345 59-351 (351)
78 PRK04635 histidinol-phosphate 100.0 7.4E-39 1.6E-43 298.2 25.8 284 25-346 55-351 (354)
79 PRK02610 histidinol-phosphate 100.0 3.1E-38 6.8E-43 296.0 30.0 286 25-350 61-371 (374)
80 PLN03026 histidinol-phosphate 100.0 1.7E-38 3.8E-43 298.0 28.1 274 39-347 89-379 (380)
81 PRK05387 histidinol-phosphate 100.0 1.4E-38 3E-43 296.7 27.2 287 24-349 54-352 (353)
82 PRK08056 threonine-phosphate d 100.0 2.8E-38 6.2E-43 294.5 29.3 285 25-349 50-354 (356)
83 PRK05664 threonine-phosphate d 100.0 3.5E-38 7.5E-43 290.7 29.3 269 39-350 52-328 (330)
84 PRK08153 histidinol-phosphate 100.0 3.2E-38 6.9E-43 295.3 29.0 286 25-353 62-368 (369)
85 PRK06225 aspartate aminotransf 100.0 9.8E-38 2.1E-42 293.6 31.3 294 25-352 60-378 (380)
86 PRK14808 histidinol-phosphate 100.0 4.9E-38 1.1E-42 290.1 27.3 276 24-347 50-334 (335)
87 PRK06836 aspartate aminotransf 100.0 1.9E-37 4.2E-42 292.6 31.9 293 24-351 66-392 (394)
88 PRK09105 putative aminotransfe 100.0 7.6E-38 1.6E-42 292.5 28.7 281 25-348 73-368 (370)
89 PRK05166 histidinol-phosphate 100.0 7E-38 1.5E-42 293.4 27.5 285 24-349 65-370 (371)
90 PF00155 Aminotran_1_2: Aminot 100.0 1.4E-38 3.1E-43 297.7 22.1 295 22-344 35-363 (363)
91 PRK04870 histidinol-phosphate 100.0 5.9E-38 1.3E-42 292.6 25.9 286 24-348 57-356 (356)
92 PRK08637 hypothetical protein; 100.0 3.7E-37 8.1E-42 290.1 30.3 300 23-351 36-387 (388)
93 PLN02397 aspartate transaminas 100.0 6.2E-37 1.3E-41 291.0 29.0 293 24-349 84-420 (423)
94 PRK02731 histidinol-phosphate 100.0 9.1E-37 2E-41 285.9 28.6 285 25-350 62-366 (367)
95 PRK03317 histidinol-phosphate 100.0 1.1E-36 2.4E-41 285.2 28.1 289 24-350 59-364 (368)
96 PLN02672 methionine S-methyltr 100.0 2E-36 4.4E-41 305.5 29.2 302 39-349 733-1079(1082)
97 COG1168 MalY Bifunctional PLP- 100.0 6.2E-36 1.3E-40 264.2 28.5 292 38-351 62-387 (388)
98 KOG0256 1-aminocyclopropane-1- 100.0 4.9E-36 1.1E-40 265.2 27.8 325 4-355 91-466 (471)
99 PRK00950 histidinol-phosphate 100.0 1.1E-36 2.4E-41 284.6 24.9 274 39-349 72-361 (361)
100 PLN02368 alanine transaminase 100.0 2E-36 4.3E-41 284.6 26.2 243 24-277 100-389 (407)
101 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1.9E-36 4E-41 279.3 25.2 281 23-345 40-330 (330)
102 PRK03967 histidinol-phosphate 100.0 3.2E-36 7E-41 278.4 24.7 275 24-350 49-334 (337)
103 PRK08354 putative aminotransfe 100.0 1.1E-35 2.4E-40 271.9 27.0 263 39-348 43-310 (311)
104 TIGR01141 hisC histidinol-phos 100.0 8.3E-36 1.8E-40 277.2 25.7 282 25-345 49-346 (346)
105 KOG0634 Aromatic amino acid am 100.0 1.3E-35 2.7E-40 264.6 24.7 303 25-351 94-467 (472)
106 PRK03321 putative aminotransfe 100.0 6E-35 1.3E-39 272.0 25.6 280 25-349 52-350 (352)
107 COG3977 Alanine-alpha-ketoisov 100.0 1.6E-34 3.4E-39 246.0 24.6 324 3-351 46-412 (417)
108 TIGR03576 pyridox_MJ0158 pyrid 100.0 5.2E-31 1.1E-35 243.2 28.3 273 38-348 56-345 (346)
109 cd00609 AAT_like Aspartate ami 100.0 3.4E-30 7.3E-35 239.4 31.9 295 25-346 30-350 (350)
110 TIGR03392 FeS_syn_CsdA cystein 100.0 1.2E-29 2.6E-34 240.2 26.1 284 39-350 63-395 (398)
111 PRK10874 cysteine sulfinate de 100.0 2.2E-29 4.8E-34 238.6 26.7 284 39-350 66-398 (401)
112 KOG0633 Histidinol phosphate a 100.0 8.5E-29 1.8E-33 207.1 18.2 296 24-348 51-375 (375)
113 PRK09295 bifunctional cysteine 100.0 4E-28 8.6E-33 230.3 25.3 284 39-349 70-403 (406)
114 TIGR01979 sufS cysteine desulf 100.0 7.9E-28 1.7E-32 228.2 26.0 287 39-350 65-401 (403)
115 PLN02855 Bifunctional selenocy 100.0 1.7E-27 3.8E-32 227.1 25.0 291 39-352 79-420 (424)
116 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 2.1E-27 4.5E-32 222.5 23.8 277 38-350 53-368 (370)
117 PRK13238 tnaA tryptophanase/L- 100.0 3.5E-27 7.7E-32 224.8 24.9 300 25-350 72-433 (460)
118 COG0520 csdA Selenocysteine ly 100.0 1.3E-26 2.8E-31 216.6 27.5 286 38-349 68-404 (405)
119 PRK07049 methionine gamma-lyas 100.0 1.5E-26 3.2E-31 219.2 28.0 294 24-349 77-425 (427)
120 cd06451 AGAT_like Alanine-glyo 100.0 2.4E-26 5.2E-31 214.5 28.7 285 39-349 35-356 (356)
121 TIGR00858 bioF 8-amino-7-oxono 100.0 1.5E-26 3.2E-31 216.1 26.2 271 39-345 64-360 (360)
122 PRK02948 cysteine desulfurase; 100.0 5.4E-27 1.2E-31 220.8 22.9 287 39-351 46-375 (381)
123 KOG0258 Alanine aminotransfera 100.0 1.3E-26 2.7E-31 204.3 23.0 316 23-349 105-472 (475)
124 TIGR01822 2am3keto_CoA 2-amino 100.0 3.1E-26 6.8E-31 216.6 26.4 276 39-350 86-389 (393)
125 cd06453 SufS_like Cysteine des 100.0 1.3E-26 2.8E-31 217.7 22.9 280 39-344 46-373 (373)
126 PLN02822 serine palmitoyltrans 100.0 3.3E-26 7.2E-31 219.9 25.5 278 39-350 157-477 (481)
127 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 5.2E-26 1.1E-30 212.5 25.5 277 38-348 46-360 (361)
128 TIGR01976 am_tr_V_VC1184 cyste 100.0 4.1E-26 8.9E-31 216.1 25.0 283 39-344 63-397 (397)
129 PF12897 Aminotran_MocR: Alani 99.9 1.6E-25 3.4E-30 198.8 25.9 301 24-350 61-415 (425)
130 PLN02483 serine palmitoyltrans 99.9 1.6E-25 3.6E-30 215.5 26.9 289 27-351 142-467 (489)
131 TIGR03402 FeS_nifS cysteine de 99.9 7.4E-26 1.6E-30 212.9 23.8 288 38-352 44-374 (379)
132 TIGR03403 nifS_epsilon cystein 99.9 1.2E-25 2.7E-30 211.6 24.2 292 39-352 42-377 (382)
133 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 6.6E-25 1.4E-29 204.6 28.6 283 38-348 33-355 (355)
134 COG1104 NifS Cysteine sulfinat 99.9 1.6E-25 3.4E-30 202.2 22.7 294 38-353 46-380 (386)
135 PRK13479 2-aminoethylphosphona 99.9 9E-25 1.9E-29 204.8 28.3 289 38-352 39-365 (368)
136 PRK13392 5-aminolevulinate syn 99.9 3.7E-25 8E-30 210.2 25.8 276 39-350 94-397 (410)
137 TIGR02326 transamin_PhnW 2-ami 99.9 1.1E-24 2.4E-29 203.8 27.8 284 38-349 37-361 (363)
138 cd06454 KBL_like KBL_like; thi 99.9 5.5E-25 1.2E-29 204.7 25.6 275 38-347 48-348 (349)
139 PRK06939 2-amino-3-ketobutyrat 99.9 6.2E-25 1.3E-29 208.0 26.2 280 39-351 86-394 (397)
140 PRK06460 hypothetical protein; 99.9 9.9E-25 2.1E-29 203.9 26.2 250 38-309 47-310 (376)
141 PLN02721 threonine aldolase 99.9 8.6E-25 1.9E-29 203.8 25.5 271 39-349 43-351 (353)
142 TIGR01825 gly_Cac_T_rel pyrido 99.9 2.2E-24 4.7E-29 203.4 27.6 287 26-350 69-381 (385)
143 PRK05958 8-amino-7-oxononanoat 99.9 2.1E-24 4.5E-29 203.5 27.2 274 39-348 87-385 (385)
144 PRK07582 cystathionine gamma-l 99.9 2.9E-24 6.3E-29 200.2 27.7 283 38-344 53-363 (366)
145 PRK07179 hypothetical protein; 99.9 3E-24 6.5E-29 203.7 26.8 277 38-351 101-399 (407)
146 TIGR01977 am_tr_V_EF2568 cyste 99.9 1.2E-24 2.7E-29 204.5 23.4 285 39-346 47-375 (376)
147 PLN02242 methionine gamma-lyas 99.9 2.2E-24 4.7E-29 203.6 24.4 214 38-273 78-304 (418)
148 PRK10534 L-threonine aldolase; 99.9 2.1E-24 4.6E-29 199.5 23.9 274 24-350 27-333 (333)
149 PRK08045 cystathionine gamma-s 99.9 5.3E-24 1.1E-28 199.3 26.7 241 38-299 54-307 (386)
150 cd00617 Tnase_like Tryptophana 99.9 1.9E-24 4.1E-29 203.4 23.4 301 25-351 47-409 (431)
151 TIGR02080 O_succ_thio_ly O-suc 99.9 4.7E-24 1E-28 199.6 25.2 296 24-349 45-380 (382)
152 PRK06234 methionine gamma-lyas 99.9 5.4E-24 1.2E-28 200.6 25.8 273 38-332 66-381 (400)
153 PRK08247 cystathionine gamma-s 99.9 1.6E-23 3.4E-28 195.5 27.9 274 38-349 54-363 (366)
154 PRK08133 O-succinylhomoserine 99.9 8.8E-24 1.9E-28 198.5 26.3 286 38-348 63-388 (390)
155 PRK08249 cystathionine gamma-s 99.9 1.1E-23 2.3E-28 198.0 26.0 289 38-351 66-394 (398)
156 PRK08776 cystathionine gamma-s 99.9 1.7E-23 3.8E-28 196.9 27.3 252 38-311 62-328 (405)
157 PLN02409 serine--glyoxylate am 99.9 1.6E-23 3.6E-28 197.9 27.2 289 39-352 45-374 (401)
158 cd06502 TA_like Low-specificit 99.9 1.2E-23 2.6E-28 194.9 25.2 266 39-346 35-337 (338)
159 TIGR03812 tyr_de_CO2_Arch tyro 99.9 1.4E-23 3E-28 197.2 25.1 276 39-346 62-372 (373)
160 TIGR02006 IscS cysteine desulf 99.9 8.9E-24 1.9E-28 200.2 23.8 286 39-351 50-378 (402)
161 cd00378 SHMT Serine-glycine hy 99.9 4.4E-23 9.6E-28 195.6 27.6 281 39-352 64-387 (402)
162 PRK02627 acetylornithine amino 99.9 6.8E-24 1.5E-28 200.8 21.8 268 60-350 97-394 (396)
163 PRK13520 L-tyrosine decarboxyl 99.9 3.9E-23 8.4E-28 194.0 26.2 279 39-350 62-371 (371)
164 PRK07504 O-succinylhomoserine 99.9 3.8E-23 8.3E-28 194.6 26.1 289 38-350 67-395 (398)
165 TIGR00707 argD acetylornithine 99.9 1.2E-23 2.7E-28 197.9 22.5 271 39-348 72-379 (379)
166 PRK07503 methionine gamma-lyas 99.9 5.5E-23 1.2E-27 193.8 26.8 252 38-311 67-334 (403)
167 TIGR01821 5aminolev_synth 5-am 99.9 5.2E-23 1.1E-27 195.0 26.2 276 39-350 93-396 (402)
168 PRK14012 cysteine desulfurase; 99.9 2.1E-23 4.5E-28 197.9 23.5 286 39-351 52-380 (404)
169 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 6.3E-23 1.4E-27 193.3 26.5 280 38-351 65-382 (387)
170 PRK01278 argD acetylornithine 99.9 2.4E-23 5.1E-28 196.5 23.1 269 59-350 88-388 (389)
171 PRK08861 cystathionine gamma-s 99.9 1.1E-22 2.4E-27 189.9 27.2 252 38-310 55-320 (388)
172 cd00614 CGS_like CGS_like: Cys 99.9 6.5E-23 1.4E-27 191.8 25.6 288 38-348 42-368 (369)
173 PRK06767 methionine gamma-lyas 99.9 5.1E-23 1.1E-27 193.3 24.7 286 38-349 63-384 (386)
174 COG1448 TyrB Aspartate/tyrosin 99.9 7E-24 1.5E-28 188.0 17.6 300 17-348 55-396 (396)
175 PLN03227 serine palmitoyltrans 99.9 1.4E-22 3E-27 190.6 27.1 295 27-351 39-383 (392)
176 PRK03244 argD acetylornithine 99.9 1.3E-23 2.9E-28 198.9 20.3 261 60-350 104-394 (398)
177 PRK07811 cystathionine gamma-s 99.9 1.5E-22 3.2E-27 190.1 26.6 287 38-348 63-386 (388)
178 PRK00451 glycine dehydrogenase 99.9 6.4E-23 1.4E-27 197.0 24.4 276 43-348 119-446 (447)
179 PRK08574 cystathionine gamma-s 99.9 1.5E-22 3.2E-27 189.6 25.5 252 38-311 55-322 (385)
180 TIGR01328 met_gam_lyase methio 99.9 1.5E-22 3.2E-27 190.2 25.4 287 38-349 61-389 (391)
181 PRK07050 cystathionine beta-ly 99.9 1.9E-22 4.2E-27 189.4 25.3 215 38-273 67-290 (394)
182 PRK08064 cystathionine beta-ly 99.9 3.1E-22 6.7E-27 188.1 26.4 287 38-346 56-382 (390)
183 PRK09064 5-aminolevulinate syn 99.9 2.7E-22 5.9E-27 190.4 25.8 278 38-351 93-398 (407)
184 TIGR01437 selA_rel uncharacter 99.9 1.7E-22 3.6E-27 188.3 23.3 283 39-348 48-363 (363)
185 TIGR01325 O_suc_HS_sulf O-succ 99.9 5.4E-22 1.2E-26 186.0 26.4 248 38-308 56-317 (380)
186 PRK07810 O-succinylhomoserine 99.9 3.5E-22 7.7E-27 188.1 24.7 239 38-298 72-324 (403)
187 PRK13393 5-aminolevulinate syn 99.9 9.6E-22 2.1E-26 186.5 27.2 277 39-351 93-397 (406)
188 PLN02651 cysteine desulfurase 99.9 1.5E-22 3.2E-27 189.4 21.1 273 39-338 46-364 (364)
189 cd06450 DOPA_deC_like DOPA dec 99.9 7.7E-23 1.7E-27 190.0 19.0 272 26-346 29-344 (345)
190 TIGR03235 DNA_S_dndA cysteine 99.9 7.7E-23 1.7E-27 190.6 18.1 276 39-339 45-347 (353)
191 PRK09028 cystathionine beta-ly 99.9 3.3E-21 7.1E-26 179.9 26.8 237 39-297 64-313 (394)
192 cd00613 GDC-P Glycine cleavage 99.9 1.6E-21 3.4E-26 184.8 25.1 282 30-344 59-398 (398)
193 PRK04073 rocD ornithine--oxo-a 99.9 1.1E-21 2.3E-26 185.5 22.8 262 60-348 98-395 (396)
194 PF00266 Aminotran_5: Aminotra 99.9 1.5E-21 3.3E-26 183.1 23.4 277 39-340 46-371 (371)
195 TIGR01329 cysta_beta_ly_E cyst 99.9 5.4E-21 1.2E-25 178.9 24.9 288 38-350 49-375 (378)
196 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 4.3E-21 9.2E-26 182.0 24.4 152 38-202 59-218 (418)
197 PRK07269 cystathionine gamma-s 99.9 1.3E-20 2.7E-25 175.2 26.5 211 38-271 56-274 (364)
198 TIGR01324 cysta_beta_ly_B cyst 99.9 1.2E-20 2.7E-25 175.9 26.5 286 39-348 53-374 (377)
199 PRK00011 glyA serine hydroxyme 99.9 1.4E-20 2.9E-25 179.3 27.1 276 42-350 77-389 (416)
200 PRK05939 hypothetical protein; 99.9 1.4E-20 3.1E-25 176.7 26.7 287 39-349 50-395 (397)
201 cd00610 OAT_like Acetyl ornith 99.9 6.1E-21 1.3E-25 181.7 22.2 276 39-348 82-413 (413)
202 PRK07671 cystathionine beta-ly 99.9 3.1E-20 6.8E-25 173.6 26.3 252 38-311 52-316 (377)
203 TIGR02379 ECA_wecE TDP-4-keto- 99.9 2.9E-20 6.3E-25 173.8 26.0 280 39-348 34-375 (376)
204 PRK08248 O-acetylhomoserine am 99.9 3E-20 6.6E-25 176.1 25.7 290 38-350 66-427 (431)
205 PRK05968 hypothetical protein; 99.9 6.1E-20 1.3E-24 172.5 27.1 287 38-350 65-386 (389)
206 PRK06702 O-acetylhomoserine am 99.9 1.9E-20 4.1E-25 176.3 23.5 291 38-351 63-425 (432)
207 PRK11658 UDP-4-amino-4-deoxy-L 99.9 5.9E-20 1.3E-24 172.4 26.8 282 39-349 36-378 (379)
208 PRK02936 argD acetylornithine 99.9 2.2E-20 4.7E-25 175.7 23.8 274 39-348 70-377 (377)
209 PRK06176 cystathionine gamma-s 99.9 5.6E-20 1.2E-24 172.0 25.3 252 38-311 52-316 (380)
210 TIGR01814 kynureninase kynuren 99.9 5.6E-20 1.2E-24 174.5 24.1 269 58-348 85-405 (406)
211 PRK06084 O-acetylhomoserine am 99.9 1.1E-19 2.4E-24 172.1 25.1 290 38-350 60-422 (425)
212 PRK05937 8-amino-7-oxononanoat 99.9 7.7E-20 1.7E-24 171.3 23.7 274 38-352 58-352 (370)
213 PRK05093 argD bifunctional N-s 99.9 5.2E-20 1.1E-24 174.5 22.5 264 60-350 98-400 (403)
214 PRK07505 hypothetical protein; 99.9 8.5E-20 1.9E-24 173.0 24.0 276 39-350 94-399 (402)
215 PLN02509 cystathionine beta-ly 99.9 3.9E-19 8.6E-24 168.8 26.7 286 39-349 136-460 (464)
216 PRK04260 acetylornithine amino 99.9 1.4E-19 3.1E-24 169.9 22.9 259 61-348 86-375 (375)
217 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 6.1E-19 1.3E-23 165.5 26.9 279 39-348 34-374 (375)
218 KOG1549 Cysteine desulfurase N 99.9 7.2E-20 1.6E-24 166.2 19.5 295 39-353 88-421 (428)
219 TIGR00713 hemL glutamate-1-sem 99.8 6.6E-20 1.4E-24 174.9 20.2 276 39-350 91-422 (423)
220 TIGR03588 PseC UDP-4-keto-6-de 99.8 7.3E-19 1.6E-23 165.4 26.5 281 39-348 32-380 (380)
221 COG0156 BioF 7-keto-8-aminopel 99.8 7.9E-19 1.7E-23 161.5 25.6 274 38-347 86-387 (388)
222 cd00616 AHBA_syn 3-amino-5-hyd 99.8 5.9E-19 1.3E-23 164.4 25.3 278 38-345 20-352 (352)
223 PLN02955 8-amino-7-oxononanoat 99.8 4.6E-19 9.9E-24 166.7 24.4 272 39-352 150-463 (476)
224 PRK00854 rocD ornithine--oxo-a 99.8 2.6E-19 5.5E-24 169.8 22.6 261 60-349 99-400 (401)
225 PRK08088 4-aminobutyrate amino 99.8 3.2E-19 6.9E-24 169.9 23.2 265 61-350 104-423 (425)
226 PLN02724 Molybdenum cofactor s 99.8 4.8E-19 1E-23 180.3 25.7 291 38-348 80-486 (805)
227 PRK05967 cystathionine beta-ly 99.8 1.4E-18 3.1E-23 162.0 25.5 236 40-297 68-316 (395)
228 PRK08134 O-acetylhomoserine am 99.8 1.5E-18 3.3E-23 164.4 25.6 294 38-354 66-431 (433)
229 PRK12381 bifunctional succinyl 99.8 7.8E-19 1.7E-23 166.4 23.4 268 60-355 97-404 (406)
230 cd00615 Orn_deC_like Ornithine 99.8 9.6E-20 2.1E-24 165.3 16.2 235 4-263 33-293 (294)
231 PTZ00125 ornithine aminotransf 99.8 8.3E-19 1.8E-23 166.3 22.0 264 60-351 89-396 (400)
232 TIGR01364 serC_1 phosphoserine 99.8 2.1E-18 4.6E-23 159.5 23.3 279 38-350 39-348 (349)
233 cd00611 PSAT_like Phosphoserin 99.8 1.3E-18 2.8E-23 162.0 20.9 279 38-348 46-354 (355)
234 PRK06434 cystathionine gamma-l 99.8 1E-17 2.2E-22 156.2 26.4 249 38-311 66-322 (384)
235 PRK05994 O-acetylhomoserine am 99.8 1E-17 2.2E-22 159.0 26.1 289 38-349 65-425 (427)
236 PRK04366 glycine dehydrogenase 99.8 8.4E-18 1.8E-22 162.1 25.5 306 22-352 97-450 (481)
237 KOG1412 Aspartate aminotransfe 99.8 2.2E-18 4.7E-23 148.3 18.7 320 4-353 46-408 (410)
238 PRK08114 cystathionine beta-ly 99.8 1.4E-17 2.9E-22 155.2 25.1 252 38-311 64-333 (395)
239 PRK07812 O-acetylhomoserine am 99.8 1.9E-17 4E-22 156.9 26.2 290 38-350 71-431 (436)
240 PRK03080 phosphoserine aminotr 99.8 1.9E-17 4E-22 155.5 23.6 288 38-353 50-376 (378)
241 COG0399 WecE Predicted pyridox 99.8 6.9E-17 1.5E-21 147.6 26.5 282 38-350 36-373 (374)
242 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 2.2E-17 4.7E-22 153.6 23.6 287 38-348 57-385 (386)
243 PLN00144 acetylornithine trans 99.8 2E-17 4.3E-22 155.3 23.5 268 59-350 72-380 (382)
244 TIGR00700 GABAtrnsam 4-aminobu 99.8 3.2E-17 6.9E-22 155.9 25.0 266 60-349 95-419 (420)
245 TIGR03246 arg_catab_astC succi 99.8 2.5E-17 5.4E-22 155.7 23.5 264 60-350 93-395 (397)
246 PRK13034 serine hydroxymethylt 99.8 1.2E-16 2.6E-21 151.6 25.7 283 38-351 72-393 (416)
247 PRK05613 O-acetylhomoserine am 99.8 8.4E-17 1.8E-21 152.5 23.7 253 38-311 71-374 (437)
248 PRK15407 lipopolysaccharide bi 99.8 3.8E-16 8.3E-21 148.6 27.6 279 39-349 66-435 (438)
249 PTZ00094 serine hydroxymethylt 99.8 1.6E-16 3.4E-21 152.5 25.0 280 41-350 85-408 (452)
250 TIGR01366 serC_3 phosphoserine 99.8 1.8E-16 3.8E-21 147.7 23.5 287 38-350 43-360 (361)
251 PRK06918 4-aminobutyrate amino 99.8 2E-16 4.4E-21 151.6 24.3 270 60-351 116-444 (451)
252 PRK04612 argD acetylornithine 99.8 2.3E-16 5.1E-21 148.9 23.6 265 60-351 99-404 (408)
253 PLN02624 ornithine-delta-amino 99.8 1.5E-16 3.3E-21 153.0 22.4 269 60-352 133-446 (474)
254 PRK09792 4-aminobutyrate trans 99.8 2.8E-16 6E-21 149.3 23.5 266 60-349 102-420 (421)
255 COG4992 ArgD Ornithine/acetylo 99.8 1E-16 2.2E-21 145.1 19.2 271 59-352 100-400 (404)
256 COG0626 MetC Cystathionine bet 99.7 2.2E-15 4.8E-20 138.6 27.3 254 38-312 65-333 (396)
257 PF01041 DegT_DnrJ_EryC1: DegT 99.7 5.4E-16 1.2E-20 144.9 23.4 277 38-345 27-363 (363)
258 PRK05355 3-phosphoserine/phosp 99.7 3.9E-16 8.4E-21 145.2 22.3 279 38-351 50-359 (360)
259 TIGR01885 Orn_aminotrans ornit 99.7 3.7E-16 7.9E-21 148.1 22.4 261 60-349 95-401 (401)
260 cd01494 AAT_I Aspartate aminot 99.7 1.2E-16 2.6E-21 132.5 15.7 151 39-201 3-169 (170)
261 PRK06777 4-aminobutyrate amino 99.7 1.6E-15 3.4E-20 144.2 24.9 264 60-349 102-420 (421)
262 PRK08360 4-aminobutyrate amino 99.7 1.5E-15 3.3E-20 144.8 24.6 265 60-353 102-429 (443)
263 PLN02414 glycine dehydrogenase 99.7 1.9E-15 4.2E-20 153.7 26.5 291 39-352 571-909 (993)
264 PRK13580 serine hydroxymethylt 99.7 4.5E-15 9.7E-20 140.1 26.4 265 61-351 114-446 (493)
265 KOG0053 Cystathionine beta-lya 99.7 6.4E-15 1.4E-19 134.0 25.0 216 38-274 79-303 (409)
266 PRK00062 glutamate-1-semialdeh 99.7 7.7E-16 1.7E-20 146.7 19.6 277 60-350 107-424 (426)
267 PRK02769 histidine decarboxyla 99.7 5.6E-15 1.2E-19 137.8 24.7 269 40-349 69-371 (380)
268 COG0075 Serine-pyruvate aminot 99.7 1.6E-14 3.4E-19 132.1 26.6 288 38-352 40-365 (383)
269 TIGR03531 selenium_SpcS O-phos 99.7 6.8E-15 1.5E-19 138.6 25.1 283 39-347 108-443 (444)
270 TIGR01788 Glu-decarb-GAD gluta 99.7 4.7E-15 1E-19 140.2 22.9 287 39-350 83-429 (431)
271 COG1103 Archaea-specific pyrid 99.7 6.1E-15 1.3E-19 125.0 20.6 279 38-351 63-381 (382)
272 PRK07495 4-aminobutyrate amino 99.7 1E-14 2.2E-19 138.6 24.7 264 60-352 102-423 (425)
273 PRK08117 4-aminobutyrate amino 99.7 1.1E-14 2.3E-19 139.3 25.0 268 59-351 103-430 (433)
274 PRK15029 arginine decarboxylas 99.7 7E-15 1.5E-19 145.8 23.8 226 17-266 193-465 (755)
275 KOG1411 Aspartate aminotransfe 99.7 2.3E-16 5.1E-21 137.7 11.1 295 25-349 89-424 (427)
276 PRK06058 4-aminobutyrate amino 99.6 7.9E-14 1.7E-18 133.4 24.7 260 60-350 118-442 (443)
277 PRK04311 selenocysteine syntha 99.6 1.8E-13 4E-18 130.3 26.2 285 39-349 130-463 (464)
278 COG2873 MET17 O-acetylhomoseri 99.6 6E-14 1.3E-18 124.3 20.9 288 38-349 64-424 (426)
279 PLN03032 serine decarboxylase; 99.6 1.2E-13 2.6E-18 128.1 22.6 268 39-346 69-372 (374)
280 PRK05964 adenosylmethionine--8 99.6 1.4E-13 3E-18 131.2 23.7 267 60-350 103-422 (423)
281 PRK13578 ornithine decarboxyla 99.6 1.1E-13 2.3E-18 136.2 22.8 149 38-201 176-368 (720)
282 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 1.2E-14 2.5E-19 134.9 14.4 235 16-274 53-329 (417)
283 TIGR02407 ectoine_ectB diamino 99.6 4.2E-13 9E-18 127.3 25.4 263 61-350 100-412 (412)
284 TIGR02618 tyr_phenol_ly tyrosi 99.6 1.7E-12 3.7E-17 121.0 26.7 290 27-351 67-427 (450)
285 KOG1359 Glycine C-acetyltransf 99.6 1.3E-13 2.9E-18 118.2 17.2 276 39-350 115-412 (417)
286 PRK03715 argD acetylornithine 99.6 2.9E-13 6.3E-18 127.6 21.3 260 60-350 94-393 (395)
287 PRK08593 4-aminobutyrate amino 99.6 1E-12 2.3E-17 125.6 25.2 268 60-353 104-432 (445)
288 PLN03226 serine hydroxymethylt 99.6 1.2E-12 2.7E-17 125.5 25.3 258 66-349 107-418 (475)
289 PRK15400 lysine decarboxylase 99.6 4.1E-13 8.9E-18 132.0 22.2 318 3-349 167-558 (714)
290 TIGR00474 selA seryl-tRNA(sec) 99.6 1.5E-12 3.3E-17 123.7 24.9 283 39-344 125-453 (454)
291 PRK13237 tyrosine phenol-lyase 99.6 3.8E-12 8.2E-17 119.1 26.7 291 27-351 74-434 (460)
292 PRK15399 lysine decarboxylase 99.6 2.8E-12 6E-17 126.2 25.9 303 17-349 183-558 (713)
293 TIGR00709 dat 2,4-diaminobutyr 99.5 2.3E-12 5E-17 123.3 24.5 259 62-351 105-436 (442)
294 COG2008 GLY1 Threonine aldolas 99.5 1.5E-12 3.2E-17 116.0 21.1 276 39-348 38-341 (342)
295 TIGR03372 putres_am_tran putre 99.5 1.9E-12 4.2E-17 123.1 23.1 264 60-348 135-442 (442)
296 PRK09264 diaminobutyrate--2-ox 99.5 2.6E-12 5.6E-17 122.4 23.4 262 61-351 104-417 (425)
297 PLN02452 phosphoserine transam 99.5 1.2E-12 2.5E-17 121.5 20.1 280 39-351 55-364 (365)
298 PRK06541 hypothetical protein; 99.5 4.3E-12 9.4E-17 121.7 23.6 267 60-350 113-455 (460)
299 PRK11522 putrescine--2-oxoglut 99.5 6.3E-12 1.4E-16 120.3 24.0 268 60-353 142-454 (459)
300 KOG1357 Serine palmitoyltransf 99.5 3.3E-13 7.1E-18 122.2 13.7 283 38-349 184-501 (519)
301 KOG1368 Threonine aldolase [Am 99.5 5.4E-12 1.2E-16 108.7 20.2 273 39-348 59-366 (384)
302 PRK07678 aminotransferase; Val 99.5 1.3E-11 2.9E-16 118.2 24.9 273 60-350 106-449 (451)
303 PLN02271 serine hydroxymethylt 99.5 3.8E-11 8.2E-16 114.3 27.1 264 61-349 217-539 (586)
304 COG1982 LdcC Arginine/lysine/o 99.5 2E-11 4.3E-16 115.7 24.6 323 4-349 43-403 (557)
305 PLN02760 4-aminobutyrate:pyruv 99.5 1.4E-11 3E-16 119.2 24.0 267 60-351 152-492 (504)
306 COG0160 GabT 4-aminobutyrate a 99.5 2.3E-11 5E-16 113.6 24.5 268 59-351 117-446 (447)
307 PRK04013 argD acetylornithine/ 99.5 1.4E-12 3E-17 121.2 16.3 252 60-351 82-361 (364)
308 PRK05367 glycine dehydrogenase 99.5 1.6E-11 3.6E-16 125.8 24.7 269 39-345 124-437 (954)
309 PF00464 SHMT: Serine hydroxym 99.5 4.4E-11 9.6E-16 110.8 25.0 253 65-343 92-398 (399)
310 KOG2862 Alanine-glyoxylate ami 99.5 1.1E-10 2.3E-15 101.4 25.3 288 39-352 53-384 (385)
311 PRK05639 4-aminobutyrate amino 99.5 3.7E-11 8.1E-16 115.1 24.5 265 60-351 114-444 (457)
312 PRK06943 adenosylmethionine--8 99.4 2.9E-11 6.3E-16 115.8 23.0 267 60-351 115-447 (453)
313 KOG1360 5-aminolevulinate synt 99.4 1.6E-11 3.4E-16 109.7 19.4 279 39-351 219-525 (570)
314 PRK05630 adenosylmethionine--8 99.4 5.6E-11 1.2E-15 112.8 24.6 265 60-351 101-421 (422)
315 PRK07482 hypothetical protein; 99.4 3.5E-11 7.5E-16 115.6 23.1 270 60-351 112-455 (461)
316 PRK06105 aminotransferase; Pro 99.4 4.2E-11 9.1E-16 115.0 23.4 269 60-353 110-452 (460)
317 PRK12403 putative aminotransfe 99.4 7.9E-11 1.7E-15 113.1 25.2 266 60-351 116-453 (460)
318 PRK05769 4-aminobutyrate amino 99.4 4E-11 8.6E-16 114.6 23.0 257 60-350 116-439 (441)
319 PRK07480 putative aminotransfe 99.4 3.9E-11 8.5E-16 115.0 22.5 268 60-352 112-450 (456)
320 PRK07986 adenosylmethionine--8 99.4 2.7E-11 5.8E-16 115.1 21.0 261 60-350 104-423 (428)
321 PRK05965 hypothetical protein; 99.4 4.9E-11 1.1E-15 114.5 22.9 265 60-351 108-448 (459)
322 PRK05367 glycine dehydrogenase 99.4 6.6E-11 1.4E-15 121.4 25.0 291 39-352 545-877 (954)
323 PLN02880 tyrosine decarboxylas 99.4 3.6E-11 7.8E-16 116.0 21.4 294 39-351 121-485 (490)
324 TIGR01365 serC_2 phosphoserine 99.4 8.4E-11 1.8E-15 109.2 23.0 278 39-347 42-370 (374)
325 PRK07046 aminotransferase; Val 99.4 9E-11 2E-15 112.3 23.8 275 59-350 130-450 (453)
326 PRK12389 glutamate-1-semialdeh 99.4 1E-10 2.2E-15 111.6 24.1 277 60-350 110-427 (428)
327 PLN02414 glycine dehydrogenase 99.4 7.5E-11 1.6E-15 120.6 24.5 274 39-346 151-465 (993)
328 COG0112 GlyA Glycine/serine hy 99.4 1.5E-10 3.1E-15 104.1 23.1 261 61-350 91-390 (413)
329 PRK09221 beta alanine--pyruvat 99.4 8.7E-11 1.9E-15 112.3 23.3 264 60-350 110-443 (445)
330 PRK07481 hypothetical protein; 99.4 1.5E-10 3.4E-15 110.8 24.9 268 60-351 105-446 (449)
331 PRK07036 hypothetical protein; 99.4 5.9E-11 1.3E-15 114.1 22.0 265 60-352 113-454 (466)
332 PRK13360 omega amino acid--pyr 99.4 1.9E-10 4E-15 110.0 25.0 263 60-350 107-440 (442)
333 PRK06062 hypothetical protein; 99.4 1.4E-10 3.1E-15 111.0 24.0 279 60-351 113-446 (451)
334 TIGR03799 NOD_PanD_pyr putativ 99.4 1.7E-10 3.7E-15 111.7 24.5 298 39-343 128-518 (522)
335 PLN02482 glutamate-1-semialdeh 99.4 9E-11 1.9E-15 112.6 22.3 278 60-350 156-473 (474)
336 PRK07030 adenosylmethionine--8 99.4 1.2E-10 2.5E-15 112.0 23.0 267 60-351 108-447 (466)
337 PRK06173 adenosylmethionine--8 99.4 9.6E-11 2.1E-15 111.4 22.0 264 60-350 105-425 (429)
338 PRK06917 hypothetical protein; 99.4 2.3E-10 5E-15 109.5 24.8 274 60-353 92-440 (447)
339 PRK06082 4-aminobutyrate amino 99.4 1.4E-10 3.1E-15 111.2 23.4 263 60-351 131-452 (459)
340 COG0001 HemL Glutamate-1-semia 99.4 1.3E-10 2.9E-15 106.8 21.1 281 60-351 110-429 (432)
341 PRK06149 hypothetical protein; 99.4 3.4E-10 7.4E-15 118.0 26.9 265 60-350 642-970 (972)
342 TIGR00508 bioA adenosylmethion 99.4 2.1E-10 4.6E-15 109.3 23.0 286 38-350 63-426 (427)
343 PRK12566 glycine dehydrogenase 99.4 3.1E-10 6.7E-15 114.2 24.9 288 39-350 546-876 (954)
344 PRK07483 hypothetical protein; 99.4 2.9E-10 6.3E-15 108.7 23.6 274 60-351 91-438 (443)
345 PRK00615 glutamate-1-semialdeh 99.4 1.8E-10 4E-15 109.5 21.9 275 60-350 111-428 (433)
346 PLN02590 probable tyrosine dec 99.3 5.7E-10 1.2E-14 108.0 25.1 297 39-351 169-533 (539)
347 TIGR00461 gcvP glycine dehydro 99.3 3.3E-10 7.1E-15 114.7 23.9 289 39-352 533-869 (939)
348 PRK12462 phosphoserine aminotr 99.3 4.1E-10 8.9E-15 103.6 22.4 279 39-351 52-363 (364)
349 PRK06916 adenosylmethionine--8 99.3 3E-10 6.5E-15 109.1 22.4 265 60-351 117-456 (460)
350 KOG1404 Alanine-glyoxylate ami 99.3 3.4E-10 7.3E-15 101.3 20.4 273 39-344 95-432 (442)
351 PRK06148 hypothetical protein; 99.3 4.8E-10 1E-14 117.1 24.7 267 60-350 681-1010(1013)
352 PRK08742 adenosylmethionine--8 99.3 4.3E-10 9.2E-15 108.1 22.6 266 60-350 130-467 (472)
353 PLN02263 serine decarboxylase 99.3 1.2E-09 2.7E-14 103.2 24.7 279 38-351 131-444 (470)
354 PRK06931 diaminobutyrate--2-ox 99.3 2.2E-09 4.8E-14 103.0 25.5 279 62-352 124-456 (459)
355 PRK08297 L-lysine aminotransfe 99.3 2.9E-09 6.3E-14 101.8 25.9 263 60-350 111-441 (443)
356 PRK06938 diaminobutyrate--2-ox 99.3 2E-09 4.3E-14 103.4 24.8 265 61-350 128-460 (464)
357 COG0161 BioA Adenosylmethionin 99.3 6.4E-10 1.4E-14 103.5 19.3 298 39-352 90-445 (449)
358 COG3844 Kynureninase [Amino ac 99.2 1.8E-09 3.8E-14 94.6 20.0 282 39-350 79-402 (407)
359 TIGR00699 GABAtrns_euk 4-amino 99.2 4.9E-09 1.1E-13 100.2 21.9 196 126-348 251-464 (464)
360 TIGR03251 LAT_fam L-lysine 6-t 99.1 1.8E-08 3.9E-13 96.3 23.5 260 60-346 104-430 (431)
361 COG0076 GadB Glutamate decarbo 99.1 5.3E-09 1.2E-13 99.6 19.2 228 39-272 100-368 (460)
362 KOG1401 Acetylornithine aminot 99.1 1.5E-08 3.2E-13 91.5 18.4 205 58-266 115-353 (433)
363 PF01212 Beta_elim_lyase: Beta 99.1 4.9E-10 1.1E-14 100.7 8.6 215 27-268 25-273 (290)
364 KOG1358 Serine palmitoyltransf 99.1 1.6E-09 3.5E-14 96.9 11.7 278 39-349 142-464 (467)
365 PRK06209 glutamate-1-semialdeh 99.1 1.7E-08 3.6E-13 96.5 19.6 262 60-352 105-407 (431)
366 PLN02974 adenosylmethionine-8- 99.1 4.2E-08 9.2E-13 99.4 22.8 198 127-348 585-816 (817)
367 KOG1402 Ornithine aminotransfe 99.0 1.8E-08 3.9E-13 88.4 13.5 278 39-349 104-426 (427)
368 TIGR00461 gcvP glycine dehydro 98.8 6.1E-07 1.3E-11 91.4 22.3 271 40-345 113-426 (939)
369 PLN02994 1-aminocyclopropane-1 98.8 1.5E-08 3.2E-13 82.0 7.2 65 25-99 86-153 (153)
370 PF02347 GDC-P: Glycine cleava 98.8 3.1E-07 6.7E-12 85.8 16.3 273 39-344 113-429 (429)
371 PF06838 Met_gamma_lyase: Meth 98.8 6.2E-06 1.3E-10 74.2 23.2 159 38-214 56-249 (403)
372 TIGR02617 tnaA_trp_ase tryptop 98.7 2.3E-06 5E-11 79.8 20.2 284 39-351 77-442 (467)
373 PF00202 Aminotran_3: Aminotra 98.7 1.8E-07 4E-12 86.5 13.1 192 59-259 76-314 (339)
374 COG1921 SelA Selenocysteine sy 98.7 1.2E-06 2.6E-11 80.2 16.6 199 59-265 83-299 (395)
375 PF00282 Pyridoxal_deC: Pyrido 98.6 2.5E-06 5.3E-11 79.9 17.6 231 39-273 78-362 (373)
376 PF03841 SelA: L-seryl-tRNA se 98.6 1.3E-07 2.8E-12 85.7 7.8 212 39-266 50-297 (367)
377 KOG1383 Glutamate decarboxylas 98.5 5.3E-06 1.2E-10 76.5 14.6 271 62-351 141-447 (491)
378 COG3033 TnaA Tryptophanase [Am 98.3 0.00053 1.1E-08 61.6 22.2 298 27-352 75-446 (471)
379 COG0403 GcvP Glycine cleavage 98.2 0.0012 2.5E-08 60.9 23.6 262 61-347 139-447 (450)
380 COG1932 SerC Phosphoserine ami 98.2 0.00023 5E-09 64.2 18.7 280 39-351 53-364 (365)
381 COG1003 GcvP Glycine cleavage 98.2 0.00044 9.5E-09 63.7 20.7 292 39-352 108-449 (496)
382 PF05889 SLA_LP_auto_ag: Solub 98.1 0.00055 1.2E-08 62.9 19.4 279 47-349 64-389 (389)
383 KOG0629 Glutamate decarboxylas 98.1 0.00084 1.8E-08 61.7 19.4 295 45-347 147-506 (510)
384 KOG3846 L-kynurenine hydrolase 98.1 0.00039 8.5E-09 61.1 16.2 298 39-351 114-462 (465)
385 TIGR03811 tyr_de_CO2_Ent tyros 98.0 0.00085 1.8E-08 66.4 19.4 175 89-265 224-475 (608)
386 KOG1403 Predicted alanine-glyo 98.0 0.00077 1.7E-08 59.1 16.4 179 149-349 237-436 (452)
387 PRK12566 glycine dehydrogenase 97.9 0.0039 8.4E-08 64.1 23.2 229 89-345 170-439 (954)
388 KOG2467 Glycine/serine hydroxy 97.9 0.0047 1E-07 55.8 20.7 256 67-349 114-425 (477)
389 COG4100 Cystathionine beta-lya 97.7 0.0015 3.3E-08 57.4 13.2 156 39-211 68-257 (416)
390 KOG1405 4-aminobutyrate aminot 97.4 0.0026 5.7E-08 57.1 12.1 198 126-350 270-483 (484)
391 KOG0628 Aromatic-L-amino-acid/ 97.2 0.0085 1.9E-07 55.8 12.6 128 38-166 111-276 (511)
392 KOG2790 Phosphoserine aminotra 96.5 0.064 1.4E-06 47.0 12.1 285 38-350 54-368 (370)
393 KOG3843 Predicted serine hydro 95.5 0.2 4.4E-06 43.6 10.3 196 145-355 177-407 (432)
394 KOG2040 Glycine dehydrogenase 94.4 4.6 0.0001 40.0 17.3 250 81-350 624-918 (1001)
395 KOG2040 Glycine dehydrogenase 92.8 9.8 0.00021 37.8 16.5 226 89-345 207-478 (1001)
396 PLN02672 methionine S-methyltr 86.7 12 0.00025 40.2 12.7 195 25-234 420-647 (1082)
397 TIGR01470 cysG_Nterm siroheme 72.6 21 0.00045 30.4 7.7 93 60-163 10-103 (205)
398 PRK08057 cobalt-precorrin-6x r 62.0 18 0.00039 31.9 5.2 88 61-159 4-96 (248)
399 TIGR03573 WbuX N-acetyl sugar 56.7 34 0.00073 31.7 6.4 121 39-164 43-169 (343)
400 TIGR00715 precor6x_red precorr 41.2 46 0.001 29.5 4.5 92 61-159 2-96 (256)
401 KOG0119 Splicing factor 1/bran 38.8 3.8E+02 0.0083 26.1 11.1 107 244-350 101-230 (554)
402 PF02571 CbiJ: Precorrin-6x re 38.1 56 0.0012 28.8 4.5 91 61-159 2-97 (249)
403 COG1648 CysG Siroheme synthase 37.7 2.5E+02 0.0054 24.0 8.3 89 60-162 13-105 (210)
404 PF05687 DUF822: Plant protein 37.5 2E+02 0.0044 22.8 6.9 51 242-315 10-64 (150)
405 PF13113 DUF3970: Protein of u 37.4 42 0.0009 22.1 2.6 21 327-347 3-23 (60)
406 cd04915 ACT_AK-Ectoine_2 ACT d 34.7 1E+02 0.0022 20.6 4.5 46 300-348 19-64 (66)
407 PF01408 GFO_IDH_MocA: Oxidore 32.2 1.8E+02 0.0039 21.6 6.1 64 90-161 29-92 (120)
408 COG1184 GCD2 Translation initi 31.1 2.3E+02 0.0051 25.7 7.3 105 58-165 118-232 (301)
409 cd04891 ACT_AK-LysC-DapG-like_ 31.0 1.3E+02 0.0027 18.8 4.5 45 300-344 16-60 (61)
410 PF14258 DUF4350: Domain of un 30.8 1.7E+02 0.0036 19.6 5.3 59 100-161 10-70 (70)
411 cd04913 ACT_AKii-LysC-BS-like_ 30.3 1.6E+02 0.0035 19.3 5.5 49 300-348 17-65 (75)
412 KOG1467 Translation initiation 30.1 1.7E+02 0.0037 28.4 6.4 107 59-165 359-472 (556)
413 cd04922 ACT_AKi-HSDH-ThrA_2 AC 29.6 1.3E+02 0.0027 19.5 4.3 46 300-348 19-64 (66)
414 cd04918 ACT_AK1-AT_2 ACT domai 29.2 1.3E+02 0.0028 19.9 4.3 46 300-348 18-63 (65)
415 cd04937 ACT_AKi-DapG-BS_2 ACT 28.7 1.5E+02 0.0032 19.5 4.5 44 300-348 19-62 (64)
416 COG4098 comFA Superfamily II D 28.1 3.2E+02 0.007 25.5 7.6 64 39-112 103-169 (441)
417 PRK14420 acylphosphatase; Prov 27.8 1.1E+02 0.0025 22.0 4.0 45 300-347 19-63 (91)
418 cd04920 ACT_AKiii-DAPDC_2 ACT 27.8 1.5E+02 0.0033 19.5 4.4 44 300-348 18-61 (63)
419 PRK14106 murD UDP-N-acetylmura 27.8 2.1E+02 0.0045 27.5 7.0 93 60-165 6-102 (450)
420 cd04924 ACT_AK-Arch_2 ACT doma 26.0 1.6E+02 0.0035 18.9 4.4 46 300-348 19-64 (66)
421 PF12575 DUF3753: Protein of u 25.5 1.1E+02 0.0024 21.1 3.3 24 330-353 13-36 (72)
422 PHA02650 hypothetical protein; 24.9 1.1E+02 0.0024 21.4 3.2 23 330-352 13-35 (81)
423 COG2099 CobK Precorrin-6x redu 24.1 2.1E+02 0.0046 25.2 5.6 113 60-186 3-118 (257)
424 KOG1465 Translation initiation 23.4 5.7E+02 0.012 23.3 8.1 126 60-190 163-298 (353)
425 PHA02975 hypothetical protein; 23.2 1.2E+02 0.0026 20.6 3.0 23 330-352 13-35 (69)
426 PRK14438 acylphosphatase; Prov 22.5 1.7E+02 0.0037 21.1 4.1 44 300-346 20-63 (91)
427 PRK14429 acylphosphatase; Prov 21.9 1.9E+02 0.0041 20.8 4.2 44 300-346 19-62 (90)
428 PRK06718 precorrin-2 dehydroge 21.9 4.9E+02 0.011 21.9 9.1 35 60-99 11-45 (202)
429 TIGR03739 PRTRC_D PRTRC system 20.6 2.4E+02 0.0052 25.7 5.6 43 59-105 274-316 (320)
No 1
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-50 Score=373.75 Aligned_cols=302 Identities=24% Similarity=0.317 Sum_probs=262.1
Q ss_pred cccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 26 YLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
+|++..|+ ++||+++++++.++ |..++++++|++|+|+++++..++.+++++||+ |++++|.|+.|..++
T Consensus 60 ~Y~~~~G~-----~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDe----Vlip~P~Y~~y~~~~ 130 (393)
T COG0436 60 HYTPSAGI-----PELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDE----VLIPDPGYPSYEAAV 130 (393)
T ss_pred CCCCCCCC-----HHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCE----EEEeCCCCcCHHHHH
Confidence 68899998 99999999987654 668888777999999999999999999999999 999999999999999
Q ss_pred HHhCCeeeeecCCc--ccccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCC-
Q 018172 105 DYLRSGLYKWDGDA--NTFDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQ- 168 (360)
Q Consensus 105 ~~~g~~~~~~~~~~--~~~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~- 168 (360)
...|++++.++++. +++.. +++||+|++++||||||.++++ .+.++|++|++++|+||+|....
T Consensus 131 ~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~y 210 (393)
T COG0436 131 KLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVY 210 (393)
T ss_pred HhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhccc
Confidence 99999999998754 35544 3589999999999999999993 45678888999999999998421
Q ss_pred ----CCcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCch
Q 018172 169 ----YTPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 169 ----~~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
..+.. ...++++.+.||||.|+++|||+||++++++++++.+.+.+.....+++.+.|.++.++|+.... .
T Consensus 211 d~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~--~ 288 (393)
T COG0436 211 DGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQS--D 288 (393)
T ss_pred CCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccc--h
Confidence 23222 23578999999999999999999999994489999999999989999999999999999995422 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCCcccccccccCCCCCCcccccCCc---h-HHHHHHHHhhCeeeeCC
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPE-YPLEYCNFTGKFTNSHPGFAWLESKE---D-EDCEKLLRAERIMARGG 316 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~l~~~gI~~~pg 316 (360)
..++.+++.+++||+.+.+.|.+.+++.+.. |.|++ |+|++++. . +++.++|.++||.+.||
T Consensus 289 ~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~-------------Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG 355 (393)
T COG0436 289 EVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAF-------------YLFPKIPELLDSEEFAKKLLEEAGVAVVPG 355 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeE-------------EEEeecCCCCCHHHHHHHHHHhCCEEEecc
Confidence 6899999999999999999999998888877 77887 66777653 3 88999999999999999
Q ss_pred CCCCC--CCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 317 RRFGA--DAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 317 ~~f~~--~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
+.||. +.+++|+|++.+++.++++++++.+++.+.
T Consensus 356 ~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 356 SGFGEPPGEGYVRLSLATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred cccCCCCCCCeEEEEEecCHHHHHHHHHHHHHHHHhc
Confidence 99996 468999999888899999999999998754
No 2
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=6e-44 Score=338.16 Aligned_cols=298 Identities=19% Similarity=0.290 Sum_probs=250.2
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|+++.|. ++||++++++++. .|..++++++|++|+|+++++..++..++++||+ |++++|+|..+...
T Consensus 85 ~~Y~~~~G~-----~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~----Vlv~~P~y~~~~~~ 155 (413)
T PLN00175 85 NQYARGFGV-----PELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDE----VILFAPFYDSYEAT 155 (413)
T ss_pred CCcCCCCCC-----HHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCE----EEEeCCCchhHHHH
Confidence 579999998 9999999998764 4777777657999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcccccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCCC-
Q 018172 104 TDYLRSGLYKWDGDANTFDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQY- 169 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~~- 169 (360)
++..|++++.++++.+++.. .+++|+|++++||||||.++++ .+.++|+++++++|+||+|.+..+
T Consensus 156 ~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~ 235 (413)
T PLN00175 156 LSMAGAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFE 235 (413)
T ss_pred HHHcCCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccC
Confidence 99999999999876433221 3578999999999999999983 456778889999999999985321
Q ss_pred ---Cc---CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 170 ---TP---ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 170 ---~~---~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
.+ +.+..+++++++||||.|+++|+|+||+++ ++++++.+........++.+.+.|.++.++|+. . +.+
T Consensus 236 ~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~-~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~--~--~~~ 310 (413)
T PLN00175 236 GDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA-PPHLTWGVRQAHSFLTFATATPMQWAAVAALRA--P--ESY 310 (413)
T ss_pred CcccChhhCCCCcCcEEEEecchhhccCcchheeeeEe-CHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhC--C--HHH
Confidence 12 223357899999999999999999999999 899999999888777889999999999998873 2 378
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-----ch-HHHHHHHHhhCeeeeCCC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-----ED-EDCEKLLRAERIMARGGR 317 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~l~~~gI~~~pg~ 317 (360)
+++.++.++++++.+.+.|+++ ++.+..|.|++ |+|++++ +. +.+..+++++||.+.||.
T Consensus 311 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~~-------------f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~ 376 (413)
T PLN00175 311 YEELKRDYSAKKDILVEGLKEV-GFKVYPSSGTY-------------FVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPS 376 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeE-------------EEEEeccccCCCCHHHHHHHHHHhCCEEEeCch
Confidence 9999999999999999999998 46666676665 6777762 23 455666678899999999
Q ss_pred CCCC----CCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 318 RFGA----DAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 318 ~f~~----~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
.|+. ..+++||+++.++|++++++++|.+++++
T Consensus 377 ~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~~~ 413 (413)
T PLN00175 377 VFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKLKR 413 (413)
T ss_pred HhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHHhC
Confidence 8853 35799999988999999999999998864
No 3
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.1e-43 Score=334.76 Aligned_cols=296 Identities=19% Similarity=0.236 Sum_probs=239.4
Q ss_pred ccccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. ++||++++++++ .+|..++++++|++|+|+++++.+++..++++||+ |++++|+|+.+...
T Consensus 62 ~~Y~~~~G~-----~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~----Vlv~~P~y~~~~~~ 132 (388)
T PRK07366 62 HGYLLFHGT-----LDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDF----ALLLDPGYPSHAGG 132 (388)
T ss_pred CCCCCCCCC-----HHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCE----EEEcCCCCcchHHH
Confidence 458888887 999999999975 44777777547999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcc-cccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCC-
Q 018172 104 TDYLRSGLYKWDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQ- 168 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~- 168 (360)
++..|++++.++++.+ ++.. .++++++++++||||||.++++ .+.++|++++++||+||+|.+..
T Consensus 133 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~ 212 (388)
T PRK07366 133 VYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVF 212 (388)
T ss_pred HHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhccc
Confidence 9999999999998743 3322 2478999999999999999993 45567888999999999998532
Q ss_pred -----CCcCCC---CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCc
Q 018172 169 -----YTPITG---AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 169 -----~~~~~~---~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
.+++.. ..+++++++||||+||+||+|+||+++ ++++++.+.+.+.....+.+...|.++.+.+.. .
T Consensus 213 ~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~-~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~--~-- 287 (388)
T PRK07366 213 DGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIG-NAQLIQALRQVKAVVDFNQYRGILNGAIAALTG--P-- 287 (388)
T ss_pred CCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcC-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC--c--
Confidence 122222 234689999999999999999999998 899999999888766666544445555554531 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-----h-HHHHHHHHhhCeeee
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-----D-EDCEKLLRAERIMAR 314 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~l~~~gI~~~ 314 (360)
+.++++.++.++++++.+.+.|++++ +.+..|.+++ |+|+++++ . +.+..+++++||.++
T Consensus 288 ~~~l~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~g~-------------f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~ 353 (388)
T PRK07366 288 QATVQQTVQIFRQRRDAFINALHQIG-WPVPLPEATM-------------YVWAKLPEPWQGNSVEFCTQLVAQTGVAAS 353 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCCeeE-------------EEEEECCcccCCCHHHHHHHHHHhCCEEEe
Confidence 38999999999999999999999884 4555555555 88998864 2 344556678899999
Q ss_pred CCCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 315 GGRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 315 pg~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
||..|+. ..+|+||+++.+++++++++++|.+++
T Consensus 354 pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 354 PGSGFGKSGEGYVRFALVHDPDILEEAVERIAAFL 388 (388)
T ss_pred CchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHhC
Confidence 9999975 358999999889999999999998864
No 4
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-43 Score=332.77 Aligned_cols=299 Identities=21% Similarity=0.267 Sum_probs=246.8
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|+++.|. ++||+++++++... |..++++++|++|+|+++++.+++..++++||. |++++|+|+.+..
T Consensus 64 ~~~Y~~~~G~-----~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~----Vlv~~P~y~~~~~ 134 (403)
T PRK08636 64 THGYSVSKGI-----YKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDV----AIVPDPAYPIHSQ 134 (403)
T ss_pred cCCCCCCCCC-----HHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCE----EEEcCCCCcchHH
Confidence 4569998998 99999999998654 777776547999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCCc-c--cccc--------------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEe
Q 018172 103 ETDYLRSGLYKWDGDA-N--TFDK--------------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHD 161 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~-~--~~~~--------------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D 161 (360)
+++..|++++.++++. + +++. .++++++++++||||||.+++. .+.++|+++++++|+|
T Consensus 135 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~D 214 (403)
T PRK08636 135 AFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISD 214 (403)
T ss_pred HHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEe
Confidence 9999999999988642 1 3331 2578999999999999999993 4567788899999999
Q ss_pred ecccCCCC-----CcCCC---CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHh
Q 018172 162 LAYYWPQY-----TPITG---AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKIL 233 (360)
Q Consensus 162 ~ay~~~~~-----~~~~~---~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l 233 (360)
|+|.+..+ +++.. ..+++++++||||+||+||+|+||+++ ++++++.+.+.......+.+.+.|.++..++
T Consensus 215 e~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~-~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~ 293 (403)
T PRK08636 215 IAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVG-NKKLVGALKKIKSWLDYGMFTPIQVAATIAL 293 (403)
T ss_pred ccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeC-CHHHHHHHHHHHHHhcccCChHHHHHHHHHH
Confidence 99985321 22222 235678899999999999999999998 8999999988876656788888998887766
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc------h-HHHHHHH
Q 018172 234 GIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE------D-EDCEKLL 306 (360)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~l 306 (360)
+. . +.+++++++.++++++.+.+.|++++ +.+..|.+++ |+|+++++ . +.+..++
T Consensus 294 ~~--~--~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~p~~g~-------------~~~~~l~~~~~~~~~~~l~~~ll 355 (403)
T PRK08636 294 DG--D--QSCVEEIRETYRKRRDVLIESFANAG-WELQKPRASM-------------FVWAKIPEPARHLGSLEFSKQLL 355 (403)
T ss_pred hC--c--HHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCCcce-------------EEEEECCCccCCCCHHHHHHHHH
Confidence 42 1 48999999999999999999999873 5555565555 78888863 2 4445667
Q ss_pred HhhCeeeeCCCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 307 RAERIMARGGRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 307 ~~~gI~~~pg~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
+++||.+.||..|+. ..+++||+++.+++++++++++|++++.+
T Consensus 356 ~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 356 TEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARNIKKFLKE 400 (403)
T ss_pred HhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 788999999999975 46899999988999999999999999976
No 5
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=2e-43 Score=337.26 Aligned_cols=296 Identities=18% Similarity=0.185 Sum_probs=247.4
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|+++.|. ++||++++++++... .++++|++|+|+++++.+++..++++||. |++++|+|+.+...+
T Consensus 115 ~~Y~~~~g~-----~~lr~~ia~~~~~~~---~~~~~Iiit~G~~~al~~~~~~l~~pgd~----Vlv~~P~y~~~~~~~ 182 (431)
T PRK15481 115 RLYGDAPVS-----PELHAWAARWLRDDC---PVAFEIDLTSGAIDAIERLLCAHLLPGDS----VAVEDPCFLSSINML 182 (431)
T ss_pred hhcCCcCCC-----HHHHHHHHHHHhhcc---CCcCeEEEecCcHHHHHHHHHHhCCCCCE----EEEeCCCcHHHHHHH
Confidence 469999988 999999999987531 23458999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecCCcccccc-------CCCeeEEEEc-CCCCCCcccchH----HHHHHhhhc-CcEEEEeecccCCC---
Q 018172 105 DYLRSGLYKWDGDANTFDK-------NNGAYIEVVN-SPNNPDGTIREA----VLAKVNRSA-EGKLIHDLAYYWPQ--- 168 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~~~~~-------~~~~~~i~~~-~p~NPtG~~~~~----~~~~~~~~~-~~~li~D~ay~~~~--- 168 (360)
+..|++++.++++.++++. +.++|+++++ +||||||.+++. .+.++|+++ ++++|+||+|.+..
T Consensus 183 ~~~g~~~~~v~~~~~g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~ 262 (431)
T PRK15481 183 RYAGFSASPVSVDAEGMQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSP 262 (431)
T ss_pred HHcCCeEEeeccCCCCCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCC
Confidence 9999999999987666543 2468888886 999999999994 566777778 99999999998532
Q ss_pred -CCcCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHH
Q 018172 169 -YTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYG 247 (360)
Q Consensus 169 -~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (360)
...+....+++++++||||+|+ ||+|+||+++ ++++++.+.........+.|.++|.++..+++ ...++.++++.
T Consensus 263 ~~~~~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~-~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~--~~~~~~~l~~~ 338 (431)
T PRK15481 263 YHSVIPQTTQRWALIRSVSKALG-PDLRLAFVAS-DSATSARLRLRLNSGTQWVSHLLQDLVYACLT--DPEYQARLAQA 338 (431)
T ss_pred CCCCCcCCCCCEEEEeeeccccC-CCceeEEEeC-CHHHHHHHHHHHhccccCCCHHHHHHHHHHHh--CccHHHHHHHH
Confidence 1222234568999999999999 9999999998 89999999876665556789999999999998 34455789999
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCCCCC--CC
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRFGAD--AK 324 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~~~--~~ 324 (360)
++.++++++.+.+.|+++ ++.+..|.+++ |+|+++++. ..+.+.|.++||.++||..|+.. .+
T Consensus 339 ~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~-------------f~~~~l~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~ 404 (431)
T PRK15481 339 RLFYAQRRQKLARALQQY-GIAIPSPGDGL-------------NLWLPLDTDSQATALTLAKSGWLVREGEAFGVSAPSH 404 (431)
T ss_pred HHHHHHHHHHHHHHHHHc-CCccccCCCeE-------------EEEEECCCCHHHHHHHHHHCCcEEecCCccccCCCCC
Confidence 999999999999999988 44554565555 899999744 66667777899999999999642 46
Q ss_pred eEEEEecC-ChHHHHHHHHHHHHHHhc
Q 018172 325 YARVSMLS-REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 325 ~~R~s~~~-~~e~~~~~~~~l~~~~~~ 350 (360)
++|||++. +++++++++++|.+++++
T Consensus 405 ~iRis~~~~~~~~i~~~~~~l~~~~~~ 431 (431)
T PRK15481 405 GLRITLSTLNDAEINRLAADLHQALNR 431 (431)
T ss_pred eEEEEcCCCChHHHHHHHHHHHHHhcC
Confidence 89999987 899999999999998864
No 6
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-43 Score=333.25 Aligned_cols=300 Identities=16% Similarity=0.184 Sum_probs=247.7
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. ++||+++++++.. +|.+++++++|++|+|+++++..++..++++||+ |++++|+|+.+..+
T Consensus 72 ~~Y~~~~G~-----~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~----Vlv~~P~y~~~~~~ 142 (405)
T PRK06207 72 QAYTEYRGD-----ADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGDK----VAIVQPDYFANRKL 142 (405)
T ss_pred ccCCCCCCC-----HHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCE----EEEeCCCchhHHHH
Confidence 468888888 9999999998764 4777776458999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCc------ccccc-------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccC
Q 018172 104 TDYLRSGLYKWDGDA------NTFDK-------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYW 166 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~------~~~~~-------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~ 166 (360)
++..|++++.++++. .+++. +.+++++++++||||||.+++. .+.++|+++++++|+||+|.+
T Consensus 143 ~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~ 222 (405)
T PRK06207 143 VEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSR 222 (405)
T ss_pred HHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccc
Confidence 999999999888651 22222 2478999999999999999983 455678889999999999985
Q ss_pred CC-----CCcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCC
Q 018172 167 PQ-----YTPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSD 238 (360)
Q Consensus 167 ~~-----~~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 238 (360)
.. ..++. ...+++++++||||+|++||+|+||+++ ++++++.+.........+.+.+.|.++.++++. +
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~-~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~--~ 299 (405)
T PRK06207 223 LLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFG-SPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSE--P 299 (405)
T ss_pred cccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEc-CHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhC--c
Confidence 22 12222 2467899999999999999999999998 899999999888777788888999999998872 2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHH-HhhCeee
Q 018172 239 DYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLL-RAERIMA 313 (360)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l-~~~gI~~ 313 (360)
..++++.++.++++++.+.+.|++++++.+..|.+++ |+|++++. ..++.+.| .++||.+
T Consensus 300 --~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~-------------fl~~~l~~~~~~~~~~~~~l~~~~gV~v 364 (405)
T PRK06207 300 --DGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGS-------------YLFPRLPRLAVSLHDFVKILRLQAGVIV 364 (405)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeE-------------EEEEeCcccCCCHHHHHHHHHHhcCEEE
Confidence 2677888888899999999999887666665566555 88888863 24455555 5789999
Q ss_pred eCCCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 314 RGGRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 314 ~pg~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
+||..|+. .++++|||++.+++++++++++|.+++++.
T Consensus 365 ~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 365 TPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLIERY 403 (405)
T ss_pred eCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 99999964 468999999888999999999999998764
No 7
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=3.7e-43 Score=332.07 Aligned_cols=297 Identities=16% Similarity=0.220 Sum_probs=244.3
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHhhc-CCC-CCCCCcEEEcCChHHHHHHHHHhhcCC---CCCCCceEEEeCCCC
Q 018172 23 LMSYLSDMGNVCWFLVPELAEAINNLHHVV-DNA-VSDGRHIVIGTGSTQLYQAALYALSSP---GGPEPISVVSAAPYY 97 (360)
Q Consensus 23 ~~~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~-~~~~~~i~~t~G~t~~l~~~~~~l~~~---gd~~~~~vl~~~p~~ 97 (360)
....|+++.|. ++||++++++++.+ |.+ ++++++|++|+|+++++..++..++++ ||. |+++.|+|
T Consensus 57 ~~~~Y~~~~G~-----~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~----vlv~~P~y 127 (396)
T PRK09147 57 GLASYPTTAGL-----PALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPL----VVCPNPFY 127 (396)
T ss_pred hhcCCCCCCCC-----HHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCE----EEEcCCCc
Confidence 34569988988 99999999998654 777 777568999999999999999999999 777 99999999
Q ss_pred CCcHHHHHHhCCeeeeecCCcc-cccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeec
Q 018172 98 SQYPAETDYLRSGLYKWDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLA 163 (360)
Q Consensus 98 ~~~~~~~~~~g~~~~~~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~a 163 (360)
..+..+++..|++++.++++.+ ++.. .+++++++++|||||||.++++ .+.++|++++++||+||+
T Consensus 128 ~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~ 207 (396)
T PRK09147 128 QIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDEC 207 (396)
T ss_pred cchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeecc
Confidence 9999999999999999998643 3222 2478999999999999999983 455678889999999999
Q ss_pred ccCCCC----Cc---C-------CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHH
Q 018172 164 YYWPQY----TP---I-------TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRA 229 (360)
Q Consensus 164 y~~~~~----~~---~-------~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 229 (360)
|.+..+ ++ . ....+++++++||||.|+++|+|+||+++ ++++++.+.+.+...+.+.+.+.|.++
T Consensus 208 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~-~~~l~~~~~~~~~~~~~~~~~~~q~a~ 286 (396)
T PRK09147 208 YSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAG-DAALLKKFLLYRTYHGCAMPPAVQAAS 286 (396)
T ss_pred ccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecC-CHHHHHHHHHHhhhcccCCCHHHHHHH
Confidence 985321 11 1 01247899999999999999999999998 899999998877666678889999988
Q ss_pred HHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-ch-HHHHHHHH
Q 018172 230 AKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-ED-EDCEKLLR 307 (360)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~l~ 307 (360)
.+.+. . +.++.+.++.++++++.+.+.|+++ +.+..|.+++ |+|++++ +. +.+..+++
T Consensus 287 ~~~~~---~--~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~~g~-------------f~~~~~~~~~~~~~~~ll~ 346 (396)
T PRK09147 287 IAAWN---D--EAHVRENRALYREKFDAVTPILAPV--LDVQLPDAGF-------------YLWAKVPGDDTEFARRLYA 346 (396)
T ss_pred HHHhc---c--hhHHHHHHHHHHHHHHHHHHHHHHh--cCCCCCCeeE-------------EEEEECCCCHHHHHHHHHH
Confidence 77664 2 2789999999999999999999885 3444555554 8899886 33 45566667
Q ss_pred hhCeeeeCCCCCCC-------CCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 308 AERIMARGGRRFGA-------DAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 308 ~~gI~~~pg~~f~~-------~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
++||.+.||..|+. ..+++|++++.+++++++++++|.++++
T Consensus 347 ~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 347 DYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLAECVEAAERIVDFCR 395 (396)
T ss_pred hCCEEEeCCccccccccCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence 88999999998852 2579999998889999999999999874
No 8
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=5e-43 Score=331.58 Aligned_cols=300 Identities=19% Similarity=0.258 Sum_probs=248.6
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|+++.|. ++||++++++++.+ |..++++++|++|+|++++++.++..++++||+ |++++|+|+.+..
T Consensus 61 ~~~Y~~~~G~-----~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~----Vl~~~P~y~~~~~ 131 (405)
T PRK09148 61 THRYSASKGI-----PGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDV----ILCPNPSYPIHAF 131 (405)
T ss_pred cCCCCCCCCC-----HHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCE----EEEcCCCCcccHH
Confidence 3569988888 99999999998754 777776558999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCCccc-ccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCC
Q 018172 103 ETDYLRSGLYKWDGDANT-FDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQ 168 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~~~-~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~ 168 (360)
+++..|++++.++.+.++ +.. .++++++++++||||||.+++. .+.++|+++++++|+||+|.+..
T Consensus 132 ~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~ 211 (405)
T PRK09148 132 GFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIY 211 (405)
T ss_pred HHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhh
Confidence 999999999999876432 211 2578999999999999999993 45677888999999999998522
Q ss_pred -----CCcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCc
Q 018172 169 -----YTPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 169 -----~~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
..++. ...+++++++||||.|++||+|+||+++ ++++++.+.+.+.....+.+.+.|.++..++.. .
T Consensus 212 ~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~-~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~--~-- 286 (405)
T PRK09148 212 FDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG-NERLIAALTRVKSYLDYGAFTPIQVAATAALNG--P-- 286 (405)
T ss_pred cCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeC-CHHHHHHHHHHHHHhccCCChHHHHHHHHHHhC--c--
Confidence 12222 2345678899999999999999999998 899999999888777788899999999998862 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc------h-HHHHHHHHhhCeee
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE------D-EDCEKLLRAERIMA 313 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~l~~~gI~~ 313 (360)
+.++++.++.++++++.+.+.|++++ +.+..|.+++ |+|++++. . +....+++++||.+
T Consensus 287 ~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~g~-------------f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v 352 (405)
T PRK09148 287 QDCIAEMRELYKKRRDVLVESFGRAG-WDIPPPAASM-------------FAWAPIPEAFRHLGSLEFSKLLVEKADVAV 352 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC-CccCCCCeeE-------------EEEEECCCccCCCCHHHHHHHHHHhCCEEE
Confidence 38899999999999999999999874 4544555554 78888763 2 34455566889999
Q ss_pred eCCCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 314 RGGRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 314 ~pg~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
+||..|+. .++++||+++.+++.+++++++|.+++.+.
T Consensus 353 ~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l~~~ 391 (405)
T PRK09148 353 APGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFLSSA 391 (405)
T ss_pred eCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 99999975 368999999878999999999999999754
No 9
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.3e-43 Score=331.21 Aligned_cols=289 Identities=20% Similarity=0.307 Sum_probs=240.5
Q ss_pred CCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhC
Q 018172 30 MGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLR 108 (360)
Q Consensus 30 ~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g 108 (360)
..|. ++||++++++++. +|..++++++|++|+|+++++.+++..++++||. |++++|+|+.+...++..|
T Consensus 68 ~~G~-----~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~----Vlv~~P~y~~~~~~~~~~G 138 (399)
T PRK07681 68 LSGI-----QEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDI----ILVPDPGYTAYETGIQMAG 138 (399)
T ss_pred CCCc-----HHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCE----EEECCCCccchHHHHHhcC
Confidence 4666 9999999999874 4777776468999999999999999999999998 9999999999999999999
Q ss_pred CeeeeecCCcc-cccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCC-----C
Q 018172 109 SGLYKWDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQ-----Y 169 (360)
Q Consensus 109 ~~~~~~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~-----~ 169 (360)
++++.++++.+ ++.. .+++++|++++||||||.++++ .+.++|+++++++|+||+|.+.. .
T Consensus 139 ~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~ 218 (399)
T PRK07681 139 ATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKP 218 (399)
T ss_pred CEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCC
Confidence 99999998754 3322 2578999999999999999993 45567888999999999998422 1
Q ss_pred CcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHH
Q 018172 170 TPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEY 246 (360)
Q Consensus 170 ~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 246 (360)
.++. ...+++++++||||+||++|+|+||+++ ++++++.+...+.....+.+.+.|.++.++++. .. .++++
T Consensus 219 ~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~-~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~~--~~~~~ 293 (399)
T PRK07681 219 ISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIG-NEEIVRALTQFKSNTDYGVFLPIQKAACAALRN--GA--AFCEK 293 (399)
T ss_pred CChhhCCCCcccEEEEeecccccCCccceeEEEec-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC--cH--HHHHH
Confidence 1221 2346789999999999999999999998 899999998887766788999999999998873 22 78999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch----HHHHHHHHhhCeeeeCCCCCCC-
Q 018172 247 GRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED----EDCEKLLRAERIMARGGRRFGA- 321 (360)
Q Consensus 247 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~gI~~~pg~~f~~- 321 (360)
.++.++++++.+.+.|+++ ++.+..|.+++ |+|+++++. +.+..+++++||.++||..|+.
T Consensus 294 ~~~~~~~~~~~l~~~L~~~-g~~~~~p~~g~-------------f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~ 359 (399)
T PRK07681 294 NRGIYQERRDTLVDGFRTF-GWNVDKPAGSM-------------FVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGPH 359 (399)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCcccCCCeee-------------EEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCcC
Confidence 9999999999999999988 45554555554 888888742 4445555558999999999975
Q ss_pred CCCeEEEEecCChHHHHHHHHHHHH
Q 018172 322 DAKYARVSMLSREEIFNIFLERLSA 346 (360)
Q Consensus 322 ~~~~~R~s~~~~~e~~~~~~~~l~~ 346 (360)
.++++|++++.+++++++++++|++
T Consensus 360 ~~~~iRis~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 360 GEGFVRIALVQDEEVLQQAVENIRN 384 (399)
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHH
Confidence 4679999998888999999999988
No 10
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-43 Score=336.07 Aligned_cols=301 Identities=23% Similarity=0.245 Sum_probs=265.0
Q ss_pred cccccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|.++.|. ++||+++++++. .+|+.++++ +|++|+|+++++.+++..+++|||+ |++++|+|....+
T Consensus 125 ~~~y~~~~G~-----~~LR~~ia~~l~~~~g~~~~~~-~IiiT~G~q~al~l~~~~l~~pGd~----v~vE~PtY~~~~~ 194 (459)
T COG1167 125 ALQYGPTAGL-----PELREAIAAYLLARRGISCEPE-QIVITSGAQQALDLLLRLLLDPGDT----VLVEDPTYPGALQ 194 (459)
T ss_pred hhcCCCCCCc-----HHHHHHHHHHHHHhcCCccCcC-eEEEeCCHHHHHHHHHHHhCCCCCE----EEEcCCCcHHHHH
Confidence 4568888988 999999999987 889999987 9999999999999999999999999 9999999999999
Q ss_pred HHHHhCCeeeeecCCccccccC--------CCeeEEEE-cCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC-
Q 018172 103 ETDYLRSGLYKWDGDANTFDKN--------NGAYIEVV-NSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ- 168 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~~~~~~~--------~~~~~i~~-~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~- 168 (360)
+++..|.+++.+++|.+|++.+ .++|++++ ++-+||||.+|| +.+.++|+++|++||+||.|++..
T Consensus 195 ~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~ 274 (459)
T COG1167 195 ALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRY 274 (459)
T ss_pred HHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhc
Confidence 9999999999999999998873 25787755 578999999999 367788888999999999999522
Q ss_pred ----CCcCC--CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchh
Q 018172 169 ----YTPIT--GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 169 ----~~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
.+++. +..+++|+++||||+++ ||+|+||+++ ++++++.+...+...+.+++.+.|.+++..+. .+.+++
T Consensus 275 ~~~p~~~l~~ld~~~rViy~gSFSK~l~-PglRlG~vv~-p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~--~G~~~~ 350 (459)
T COG1167 275 DGPPPPPLKALDAPGRVIYLGSFSKTLA-PGLRLGYVVA-PPELIEKLLRLKQAADLGPSSLSQAALAAFLL--SGHYDR 350 (459)
T ss_pred CCCCCCChHhhCCCCCEEEEeeehhhcc-cccceeeeeC-CHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH--cCCHHH
Confidence 22222 45689999999999998 9999999999 89999999999999999999999999999888 567889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC--CcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeC-C
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSG--VFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARG-G 316 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~p-g 316 (360)
|++++++.|++|++.+.+.|.++. ...+..|.+++ |+|+++++. ..+.+.+.++|+.+.| |
T Consensus 351 hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~-------------flwl~l~~~~~~~~l~~~a~~~gv~i~~~g 417 (459)
T COG1167 351 HLRRLRREYARRRDALLEALAEYLPELATWTRPEGGL-------------FLWLELPEGIDARELLAAALEKGVVVTPLG 417 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceE-------------EEEEEcCCCCCHHHHHHHHHHCCCEEEcCC
Confidence 999999999999999999999984 56666666665 999999875 6788888899999999 9
Q ss_pred CCCCC---CCCeEEEEecC-ChHHHHHHHHHHHHHHhch
Q 018172 317 RRFGA---DAKYARVSMLS-REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 317 ~~f~~---~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~ 351 (360)
..|.. ..+++|++++. ++|++++++++|.+.+.+.
T Consensus 418 ~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~ 456 (459)
T COG1167 418 SAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREA 456 (459)
T ss_pred ccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 88854 34589999988 8999999999999998764
No 11
>PLN02187 rooty/superroot1
Probab=100.00 E-value=1.8e-42 Score=331.48 Aligned_cols=302 Identities=18% Similarity=0.245 Sum_probs=242.6
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. ++||++++++++. ++..++++ +|++|+|+++++.+++..++++||+ |++++|+|+.+...
T Consensus 102 ~~Y~~~~G~-----~~lR~aiA~~~~~~~~~~~~~~-~I~it~G~~~al~~~~~~l~~pGd~----Vlv~~P~y~~y~~~ 171 (462)
T PLN02187 102 NSYGPGAGI-----LPARRAVADYMNRDLPHKLTPE-DIFLTAGCNQGIEIVFESLARPNAN----ILLPRPGFPHYDAR 171 (462)
T ss_pred CCCCCCCCh-----HHHHHHHHHHHHHhcCCCCCcc-cEEEeCCHHHHHHHHHHHhcCCCCE----EEEeCCCCccHHHH
Confidence 468888888 9999999999864 46667664 8999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCc-c--cccc-------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCCC
Q 018172 104 TDYLRSGLYKWDGDA-N--TFDK-------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQY 169 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~-~--~~~~-------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~~ 169 (360)
++..|++++.+++.. + +++. ++++++++++|||||||.++++ .+.++|+++++++|+||+|.+..+
T Consensus 172 ~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f 251 (462)
T PLN02187 172 AAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIF 251 (462)
T ss_pred HHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEecccccccc
Confidence 999999999887632 1 2221 3578999999999999999983 455678889999999999985322
Q ss_pred -----CcCC--CCCCccEEEeccccccCCCCceEEEEeecCHH----HHHHHHHHHhhccc--cCChHHHHHHHHHhccc
Q 018172 170 -----TPIT--GAADHDIMLFTLSKCTGHAGSRIGWALVKDTE----VARKMTRFIELGSI--GVSKESQLRAAKILGIV 236 (360)
Q Consensus 170 -----~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~----~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~ 236 (360)
.++. ....++++++||||.|++||+|+||+++++++ +++.+...+..... +++.+.|.++.++++.
T Consensus 252 ~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~- 330 (462)
T PLN02187 252 GDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEK- 330 (462)
T ss_pred CCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhc-
Confidence 1222 12246899999999999999999999984443 34566666655444 4588999999998873
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCCCcccccccccCCCCCCcccccCC--------ch-HHHHHHH
Q 018172 237 SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFG-LPEYPLEYCNFTGKFTNSHPGFAWLESK--------ED-EDCEKLL 306 (360)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~l 306 (360)
..+.++++.++.++++++++.+.|+++++.. ...|.+++ |+|++++ +. +++.+++
T Consensus 331 --~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~-------------fl~~~l~~~~~~~~~~~~~~~~~ll 395 (462)
T PLN02187 331 --ADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCT-------------YLLTKLELSLMDNIKDDIDFCVKLA 395 (462)
T ss_pred --CcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeE-------------EEEeecChhhCCCCCCHHHHHHHHH
Confidence 1248999999999999999999999986543 23455555 6776543 23 6677888
Q ss_pred HhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhchhc
Q 018172 307 RAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 307 ~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~~ 353 (360)
.++||.++||..|+. ++|+||+++.+++.+++++++|.+++++..+
T Consensus 396 ~~~gV~v~pG~~fg~-~~~iRis~~~~~e~l~~al~rL~~~l~~~~~ 441 (462)
T PLN02187 396 REENLVFLPGDALGL-KNWMRITIGVEAHMLEDALERLKGFCTRHAK 441 (462)
T ss_pred hhCCEEEECccccCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999985 7899999988999999999999999987543
No 12
>PRK07324 transaminase; Validated
Probab=100.00 E-value=7.3e-43 Score=327.00 Aligned_cols=296 Identities=21% Similarity=0.293 Sum_probs=248.1
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|++..|. ++||++++++++. + .+++|++|+|+++++.+++.+++++||+ |+++.|+|..+..++
T Consensus 56 ~~Y~~~~G~-----~~lr~~ia~~~~~----~-~~~~vi~t~G~~~al~~~~~~l~~~gd~----Vl~~~P~y~~~~~~~ 121 (373)
T PRK07324 56 LTYGWIEGS-----PEFKEAVASLYQN----V-KPENILQTNGATGANFLVLYALVEPGDH----VISVYPTYQQLYDIP 121 (373)
T ss_pred ccCCCCCCC-----HHHHHHHHHHhcC----C-ChhhEEEcCChHHHHHHHHHHhCCCCCE----EEEcCCCchhHHHHH
Confidence 358888888 9999999998752 2 4469999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecCCcc-cccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC--
Q 018172 105 DYLRSGLYKWDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ-- 168 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~-- 168 (360)
+..|++++.++.+.+ ++.. .+++|++++++||||||.+++ +.+.++|+++|+++|+||+|.+..
T Consensus 122 ~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~ 201 (373)
T PRK07324 122 ESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDED 201 (373)
T ss_pred HHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccC
Confidence 999999999987643 3322 368899999999999999998 345567888999999999998522
Q ss_pred --CCcCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHH
Q 018172 169 --YTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEY 246 (360)
Q Consensus 169 --~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 246 (360)
..++.+..+++++++||||.||++|+|+||+++ ++++++.+.+.+...+.+.+.+.|.++..+++. .+.++++
T Consensus 202 ~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~-~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~----~~~~l~~ 276 (373)
T PRK07324 202 GSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAA-NEEVIDILRKYRDYTMICAGVFDDMLASLALEH----RDAILER 276 (373)
T ss_pred CCCCChhhccCCEEEEecchhhcCCccceeEEEec-CHHHHHHHHHHhCcEEecCChHHHHHHHHHHcC----HHHHHHH
Confidence 333445567889999999999999999999999 899999999998877788999999999888762 2478999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-ch-HHHHHHHHhhCeeeeCCCCCCCCCC
Q 018172 247 GRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-ED-EDCEKLLRAERIMARGGRRFGADAK 324 (360)
Q Consensus 247 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~l~~~gI~~~pg~~f~~~~~ 324 (360)
.++.++++++.+.+.|++++++.+..|.++++. |++++.+ +. +++.++++++||.++||+.|+. ++
T Consensus 277 ~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~-----------~i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~~-~~ 344 (373)
T PRK07324 277 NRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTS-----------FVKLDVDMPSEDFCLKLLKETGVLLVPGNRFDL-EG 344 (373)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEECCCceEEE-----------EEEeCCCCCHHHHHHHHHHhcCEEEECccccCC-CC
Confidence 999999999999999998877776777766533 3444433 23 5666777889999999999985 67
Q ss_pred eEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 325 YARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 325 ~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
++|+|++.+++.+++++++|++++++.
T Consensus 345 ~iRis~~~~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 345 HVRIGYCCDTETLKKGLKKLSEFLREF 371 (373)
T ss_pred eEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 999999889999999999999998763
No 13
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=1.4e-42 Score=326.83 Aligned_cols=295 Identities=19% Similarity=0.258 Sum_probs=243.5
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|+++.|. ++||+++++|++. .|.+++++++|++|+|+++++..++..++++||+ |++++|+|+.+..
T Consensus 60 ~~~Y~~~~G~-----~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~----vlv~~P~y~~~~~ 130 (383)
T TIGR03540 60 NHRYPSYEGM-----LAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDI----VLVPDPGYPVYRI 130 (383)
T ss_pred CCCCCCCCCC-----HHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCE----EEEeCCCCcchHH
Confidence 3569988888 9999999999874 4666666657999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCCcc-cccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC
Q 018172 103 ETDYLRSGLYKWDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ 168 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~ 168 (360)
+++..|++++.++.+.+ ++.. .+++++|++++||||||.+++ +++.++|+++++++|+||+|.+..
T Consensus 131 ~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~ 210 (383)
T TIGR03540 131 GTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEIT 210 (383)
T ss_pred HHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhc
Confidence 99999999999998743 4422 357899999999999999999 356678888999999999998422
Q ss_pred -----CCcCCC---CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCc
Q 018172 169 -----YTPITG---AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 169 -----~~~~~~---~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
..++.. ..+++++++||||.||++|+|+||+++ ++++++.+.........+.+.+.|.++.++++. .
T Consensus 211 ~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~-- 285 (383)
T TIGR03540 211 FDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG-NADLIAGLGKVKTNVDSGVFQAIQYAAIAALNG--P-- 285 (383)
T ss_pred cCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeC-CHHHHHHHHHHHHhcccCCChHHHHHHHHHHhC--C--
Confidence 222221 245789999999999999999999998 899999998877666677888999999888873 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch----HHHHHHHHhhCeeeeCC
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED----EDCEKLLRAERIMARGG 316 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~gI~~~pg 316 (360)
..++++.++.++++++.+.+.|+++ ++.+..+.+++ |+|+++++. +.+..+++++||.++||
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~-------------~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g 351 (383)
T TIGR03540 286 QDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKPKATF-------------YVWVPVPEGYTSAEFAARLLEETGVVVTPG 351 (383)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCEecCCCcce-------------EEEEECCCCCCHHHHHHHHHHHCCEEEecc
Confidence 3889999999999999999999998 45555555444 688888742 44455567889999999
Q ss_pred CCCCC-CCCeEEEEecCChHHHHHHHHHHHH
Q 018172 317 RRFGA-DAKYARVSMLSREEIFNIFLERLSA 346 (360)
Q Consensus 317 ~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~ 346 (360)
..|+. .++++||+++.+++++++++++|.+
T Consensus 352 ~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 352 VGFGEYGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred hhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence 99975 3679999998788999999988865
No 14
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-42 Score=326.65 Aligned_cols=294 Identities=20% Similarity=0.271 Sum_probs=241.7
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|+++.|. ++||+++++|++.. |..++++++|++|+|++++++.++..++++||+ |++++|+|+.+...
T Consensus 63 ~~Y~~~~G~-----~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~----Vl~~~P~y~~~~~~ 133 (385)
T PRK09276 63 HQYPSYEGM-----LEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDV----VLVPDPGYPVYKIG 133 (385)
T ss_pred CCCCCCCCc-----HHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCE----EEEcCCCCcChHHH
Confidence 468888887 99999999998754 666777656999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcc-cccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC-
Q 018172 104 TDYLRSGLYKWDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ- 168 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~- 168 (360)
++..|++++.++.+.+ ++.. ..++++|++++||||||.+++ +.+.++|+++++++|+||+|.+..
T Consensus 134 ~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~ 213 (385)
T PRK09276 134 TIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAY 213 (385)
T ss_pred HHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheec
Confidence 9999999999987643 4432 347899999999999999999 355677888999999999998422
Q ss_pred ----CCcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCch
Q 018172 169 ----YTPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 169 ----~~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
..++. ...+++++++||||.||++|+|+||+++ ++++++.+.+.+.....+.+.+.|.++..++.. . +
T Consensus 214 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~--~ 288 (385)
T PRK09276 214 DGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVG-NADLIAGLGKVKSNVDSGVFQAIQEAGIAALNG--P--Q 288 (385)
T ss_pred CCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeC-CHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcC--c--H
Confidence 12222 2246789999999999999999999998 899999998887666667888899999888862 2 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHH-HHHHHHhhCeeeeCCC
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DED-CEKLLRAERIMARGGR 317 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~l~~~gI~~~pg~ 317 (360)
.++++.++.++++++.+.+.|+++ ++.+..|.+++ |+|+++++ ... +..+++++||.++||.
T Consensus 289 ~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~-------------~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~ 354 (385)
T PRK09276 289 EVVEELRKIYQERRDILVEGLRKL-GLEVEPPKATF-------------YVWAPVPKGYTSAEFATLLLDKAGVVVTPGN 354 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcce-------------EEEEECCCCCCHHHHHHHHHHhCCEEECCch
Confidence 889999999999999999999988 45555555544 68888874 244 4555667899999999
Q ss_pred CCCC-CCCeEEEEecCChHHHHHHHHHHHH
Q 018172 318 RFGA-DAKYARVSMLSREEIFNIFLERLSA 346 (360)
Q Consensus 318 ~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~ 346 (360)
.|+. .++++||+++.+++++++++++|.+
T Consensus 355 ~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 355 GFGEYGEGYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred hhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 8875 3679999998788899999988864
No 15
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.9e-42 Score=326.39 Aligned_cols=296 Identities=23% Similarity=0.289 Sum_probs=241.9
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|++..|. ++||++++++++. +|.+++++++|++|+|+++++..++..++++||+ |++++|+|+.+..
T Consensus 63 ~~~Y~~~~g~-----~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~----vlv~~P~y~~~~~ 133 (389)
T PRK08068 63 NHKYSPFRGY-----PFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDT----ILVPDPGYPDYLS 133 (389)
T ss_pred CCCCCCCCCC-----HHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCE----EEEcCCCCcchHH
Confidence 3568888887 9999999999763 4766776547999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCCcc-cccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCC
Q 018172 103 ETDYLRSGLYKWDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQ 168 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~ 168 (360)
.++..|++++.++.+.+ ++.. ..++++|++++||||||.++++ .+.++|+++++++|+||+|.+..
T Consensus 134 ~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~ 213 (389)
T PRK08068 134 GVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIG 213 (389)
T ss_pred HHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhc
Confidence 99999999999998753 5532 2578999999999999999993 45567888999999999997421
Q ss_pred C-----CcC---CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCc
Q 018172 169 Y-----TPI---TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 169 ~-----~~~---~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
+ .+. .+..+++++++||||+||++|+|+||+++ ++++++.+.+.......+.+++.|.++.+++. .+.
T Consensus 214 ~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~--~~~- 289 (389)
T PRK08068 214 FDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG-NESVIEAINLLQDHLFVSLFGAIQDAAIEALL--SDQ- 289 (389)
T ss_pred cCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEec-CHHHHHHHHHHHhhccCCCChHHHHHHHHHHh--CcH-
Confidence 1 121 12345789999999999999999999998 89999999888876667777778888888775 233
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHH-hhCeeeeCC
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLR-AERIMARGG 316 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~-~~gI~~~pg 316 (360)
.++++.++.++++++.+.+.|+.++ +.+..|.|++ |+|+++++ .+.+.+.|. ++||.++||
T Consensus 290 -~~~~~~~~~~~~~r~~~~~~L~~~g-~~~~~~~g~~-------------~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg 354 (389)
T PRK08068 290 -SCVAELVARYESRRNAFISACREIG-WEVDAPKGSF-------------FAWMPVPKGYTSEQFADLLLEKAHVAVAPG 354 (389)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCCeeE-------------EEEEECCCCCCHHHHHHHHHHhCCEEEecc
Confidence 8899999999999999999999884 4555555554 78888864 355555555 579999999
Q ss_pred CCCCC-CCCeEEEEecCChHHHHHHHHHHHHH
Q 018172 317 RRFGA-DAKYARVSMLSREEIFNIFLERLSAI 347 (360)
Q Consensus 317 ~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~ 347 (360)
..|+. .++++||+++.+++.+++++++|.++
T Consensus 355 ~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 355 NGFGEHGEGYVRVGLLTDEERLREAVERIGKL 386 (389)
T ss_pred hHhCccCCCeEEEEEcCCHHHHHHHHHHHHHh
Confidence 99975 46799999987888888888888753
No 16
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-42 Score=326.66 Aligned_cols=296 Identities=21% Similarity=0.282 Sum_probs=245.2
Q ss_pred cccccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|+++.|. ++||++++++++ .+|..+++ ++|++|+|+++++..++.+++++||+ |++++|+|..+..
T Consensus 59 ~~~Y~~~~G~-----~~lr~~ia~~~~~~~~~~~~~-~~i~it~G~~~al~~~~~~~~~~gd~----vlv~~p~y~~~~~ 128 (384)
T PRK06348 59 HTRYTDSGGD-----VELIEEIIKYYSKNYDLSFKR-NEIMATVGACHGMYLALQSILDPGDE----VIIHEPYFTPYKD 128 (384)
T ss_pred CCCCCCCCCc-----HHHHHHHHHHHHHHhCCCCCh-hhEEEcCChHHHHHHHHHHhcCCCCE----EEEeCCCCcchHH
Confidence 3569999998 999999999985 45767776 58999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCC-cccccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC
Q 018172 103 ETDYLRSGLYKWDGD-ANTFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ 168 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~-~~~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~ 168 (360)
.++..|.+++.++.+ .+++.. .+++++|++++||||||.+++ +.+.++|+++++++|+||+|.+..
T Consensus 129 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~ 208 (384)
T PRK06348 129 QIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFS 208 (384)
T ss_pred HHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccce
Confidence 999999999988763 233221 357899999999999999998 345677888999999999998532
Q ss_pred ----CCcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCch
Q 018172 169 ----YTPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 169 ----~~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
..++. ...+++++++||||+|++||+|+||+++ ++++++.+...+.....+.+.+.|.++..++.. . +
T Consensus 209 ~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~--~ 283 (384)
T PRK06348 209 FYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIA-PDYIIETAKIINEGICFSAPTISQRAAIYALKH--R--D 283 (384)
T ss_pred eCCCccchhhcCCCcCcEEEEecchhccCCccccceeeec-CHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhC--c--H
Confidence 12222 2357899999999999999999999999 899999998888777788999999999988863 2 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hH-HHHHHHHhhCeeeeCC
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DE-DCEKLLRAERIMARGG 316 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~l~~~gI~~~pg 316 (360)
.++++.++.++++++.+.+.|+.++++.+..|.+++ |+|++++. .. .+..+++++||.+.||
T Consensus 284 ~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~-------------~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg 350 (384)
T PRK06348 284 TIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSI-------------YAFINIKKTGLSSVEFCEKLLKEAHVLVIPG 350 (384)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeE-------------EEEEecccCCCCHHHHHHHHHHhCCEEEcCc
Confidence 889999999999999999999988666656666665 67887752 24 4445556789999999
Q ss_pred CCCCC-CCCeEEEEecCChHHHHHHHHHHHHH
Q 018172 317 RRFGA-DAKYARVSMLSREEIFNIFLERLSAI 347 (360)
Q Consensus 317 ~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~ 347 (360)
+.|+. .++++|++++.+++++++++++|+++
T Consensus 351 ~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 351 KAFGESGEGYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred hhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence 99975 36799999987899999999999765
No 17
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=2.3e-42 Score=328.53 Aligned_cols=302 Identities=19% Similarity=0.251 Sum_probs=244.0
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
+.|++..|. ++||++++++++. .+..+++ ++|++|+|+++++++++..+.++||+ |+++.|+|+.|...
T Consensus 88 ~~Y~~~~G~-----~~lr~aia~~~~~~~~~~~~~-~~v~it~G~~~al~l~~~~l~~~Gd~----Vlv~~P~y~~y~~~ 157 (430)
T PLN00145 88 NSYSTCVGL-----LPARRAIAEYLSRDLPYELST-DDIYLTAGCAQAIEIIMSVLAQPGAN----ILLPRPGYPLYEAR 157 (430)
T ss_pred CCCCCCccC-----HHHHHHHHHHHhhccCCCCCh-hhEEEeCCHHHHHHHHHHHhcCCCCE----EEEcCCCCccHHHH
Confidence 468888888 9999999999864 4666665 58999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcc-cccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCCC
Q 018172 104 TDYLRSGLYKWDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQY 169 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~~ 169 (360)
+...|++++.++++.+ ++.. +++++++++++||||||.++++ .+.++|+++|+++|+||+|.+..+
T Consensus 158 ~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~ 237 (430)
T PLN00145 158 AVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTF 237 (430)
T ss_pred HHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhcc
Confidence 9999999998875322 2222 4688999999999999999982 455678889999999999985221
Q ss_pred -----CcC--CCCCCccEEEeccccccCCCCceEEEEeec-CHHHH------HHHHHHHhhccccCChHHHHHHHHHhcc
Q 018172 170 -----TPI--TGAADHDIMLFTLSKCTGHAGSRIGWALVK-DTEVA------RKMTRFIELGSIGVSKESQLRAAKILGI 235 (360)
Q Consensus 170 -----~~~--~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~-~~~~~------~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (360)
.++ .....++++++||||.|++||||+||+++. +..++ +.+..... ...+++.+.|.++..+++.
T Consensus 238 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~ 316 (430)
T PLN00145 238 GSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLN-ISTDPATFVQGAIPQIIAN 316 (430)
T ss_pred CCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhc-ccCCCCHHHHHHHHHHHhc
Confidence 222 133568999999999999999999999973 33333 34444432 3446788999999998873
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccC-CCCCcccccccccCCCCCCcccccCC--------ch-HHHHHH
Q 018172 236 VSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLP-EYPLEYCNFTGKFTNSHPGFAWLESK--------ED-EDCEKL 305 (360)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~ 305 (360)
..+.++++.++.++++++.+.+.|+.++++.+. .|.|++ |+|++++ +. +++.++
T Consensus 317 ---~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~-------------y~~v~l~~~~~~~~~~~~~~~~~l 380 (430)
T PLN00145 317 ---TKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSM-------------FVMVKLDLSCLSGIKDDMDFCCKL 380 (430)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeee-------------EEEeccChhhcCCCCCHHHHHHHH
Confidence 224899999999999999999999998776643 577776 6777664 23 567788
Q ss_pred HHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhchhcc
Q 018172 306 LRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGGSISN 354 (360)
Q Consensus 306 l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~~~ 354 (360)
++++||.+.||..|+. ++|+||+++.+++.+++++++|.+++.+.++.
T Consensus 381 l~~~gV~v~pG~~fg~-~~~lRis~~~~~~~l~~al~rl~~~~~~~~~~ 428 (430)
T PLN00145 381 AKEESVVVLPGSALGM-KNWLRITFAIDPPSLEDGLERLKSFCLRHAKL 428 (430)
T ss_pred HHhCCEEEeCccccCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHHhccc
Confidence 8899999999999985 78999999889999999999999999887654
No 18
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=4e-42 Score=324.04 Aligned_cols=298 Identities=19% Similarity=0.243 Sum_probs=244.4
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. +++|++++++++. +|..+++ ++|++|+|++++++.++..++++||+ |++++|+|+.+...
T Consensus 63 ~~Y~~~~g~-----~~lr~~ia~~~~~~~g~~~~~-~~i~it~G~~~al~~~~~~~~~~gd~----vlv~~p~y~~~~~~ 132 (387)
T PRK08960 63 TRYTAARGL-----PALREAIAGFYAQRYGVDVDP-ERILVTPGGSGALLLASSLLVDPGKH----WLLADPGYPCNRHF 132 (387)
T ss_pred CccCCCCCC-----HHHHHHHHHHHHHHhCCCCCh-hhEEEccCcHHHHHHHHHHhcCCCCE----EEEcCCCCcchHHH
Confidence 358888887 9999999999864 4666666 58999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcc-cccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCC-
Q 018172 104 TDYLRSGLYKWDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQ- 168 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~- 168 (360)
+...|.+++.++++.+ ++.. +++++++++++||||||.+++. .+.++|+++++++|+||+|.+..
T Consensus 133 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~ 212 (387)
T PRK08960 133 LRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTY 212 (387)
T ss_pred HHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEcccccccc
Confidence 9999999998887654 2222 3578899999999999999983 34567888999999999998532
Q ss_pred ---CCcCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHH
Q 018172 169 ---YTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFE 245 (360)
Q Consensus 169 ---~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 245 (360)
..+.....+++++++||||+||++|+|+||+++ ++++++.+.+.......+.+.+.|.++.+++.. ..+.+++
T Consensus 213 ~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~-~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~---~~~~~l~ 288 (387)
T PRK08960 213 GVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVA-PPAAVPELEKLAQNLYISASTPAQHAALACFEP---ETLAILE 288 (387)
T ss_pred CCCCCChhhccCCEEEEeecccccCCcccEEEEEEc-CHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhc---CcHHHHH
Confidence 223334556899999999999999999999999 899999998887767788899999999888862 2348999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----h-HHHHHHHHhhCeeeeCCCCCC
Q 018172 246 YGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----D-EDCEKLLRAERIMARGGRRFG 320 (360)
Q Consensus 246 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~l~~~gI~~~pg~~f~ 320 (360)
+.++.++++++.+.+.|++++......|.+++ |+|+++++ . +.+..+++++||.++||+.|+
T Consensus 289 ~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~-------------f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~ 355 (387)
T PRK08960 289 ARRAEFARRRDFLLPALRELGFGIAVEPQGAF-------------YLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFG 355 (387)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeE-------------EEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhC
Confidence 99999999999999999988432223455544 78888863 2 344456678899999999997
Q ss_pred C--CCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 321 A--DAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 321 ~--~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
. ..+++|++++.+.+.+++++++|.++++
T Consensus 356 ~~~~~~~iRi~~~~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 356 RHQAGQHVRFAYTQSLPRLQEAVERIARGLR 386 (387)
T ss_pred CCCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 5 3579999998888999999999988765
No 19
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-42 Score=324.01 Aligned_cols=292 Identities=18% Similarity=0.231 Sum_probs=237.6
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhc--CCCCCCCceEEEeCCCCCC
Q 018172 23 LMSYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALS--SPGGPEPISVVSAAPYYSQ 99 (360)
Q Consensus 23 ~~~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~--~~gd~~~~~vl~~~p~~~~ 99 (360)
....|+++.|. ++||++++++++.+ |.++++ ++|++|+|+++++..++..++ ++||. |+++.|+|+.
T Consensus 52 ~~~~Y~~~~G~-----~~lr~aia~~l~~~~g~~~~~-~~I~it~G~~~al~~~~~~~~~~~~gd~----vlv~~P~y~~ 121 (374)
T PRK05839 52 LLNKYPKSAGE-----ESLREAQRGFFKRRFKIELKE-NELIPTFGTREVLFNFPQFVLFDKQNPT----IAYPNPFYQI 121 (374)
T ss_pred ccCCCCCCCCC-----HHHHHHHHHHHHHHhCCCCCc-ceEEEecCcHHHHHHHHHHHhcCCCCCE----EEECCCCchh
Confidence 34679999998 99999999998654 777776 589999999999999888764 46887 9999999999
Q ss_pred cHHHHHHhCCeeeeecCCc-cccccC------CCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCC
Q 018172 100 YPAETDYLRSGLYKWDGDA-NTFDKN------NGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQ 168 (360)
Q Consensus 100 ~~~~~~~~g~~~~~~~~~~-~~~~~~------~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~ 168 (360)
+...++..|++++.++.+. +++..+ .++++++++|||||||.++++ .+.++|+++|+++|+||+|.+..
T Consensus 122 ~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~~~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~ 201 (374)
T PRK05839 122 YEGAAIASRAKVLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIY 201 (374)
T ss_pred hHHHHHhcCCEEEEeecccccCCcCCcchhhhccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcc
Confidence 9999999999999999873 344432 368999999999999999993 45567888999999999998521
Q ss_pred ----CCcCC--------CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhccc
Q 018172 169 ----YTPIT--------GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIV 236 (360)
Q Consensus 169 ----~~~~~--------~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (360)
.+++. ...+++++++||||+|++||+|+||+++ ++++++.+.......+.+.+.+.|.++.+++.
T Consensus 202 ~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~-- 278 (374)
T PRK05839 202 ENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAG-DASILKKYKAYRTYLGCASPLPLQKAAAVAWL-- 278 (374)
T ss_pred cCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEec-CHHHHHHHHHHHhhcCCCCChHHHHHHHHHhc--
Confidence 12211 1336899999999999999999999998 89999999887766667888999998887775
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeC
Q 018172 237 SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARG 315 (360)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~p 315 (360)
++ .++++.++.++++++.+.+.|. .. .|.++ +|+|+++++. +.+..+++++||.++|
T Consensus 279 -~~--~~~~~~~~~~~~~~~~~~~~l~----~~--~p~gg-------------~fi~~~~~~~~~~~~~l~~~~gi~v~p 336 (374)
T PRK05839 279 -DD--EHAEFFRNIYAKNLKLAREILG----IT--IPPAT-------------FYVWLPVDNDEEFTKKLYQNEGIKVLP 336 (374)
T ss_pred -cc--hHHHHHHHHHHHHHHHHHHhcC----CC--CCCee-------------EEEEEeCCChHHHHHHHHHHCCEEEeC
Confidence 33 8899999999999998887652 11 34444 4899999766 4455555569999999
Q ss_pred CCCCCC---CCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 316 GRRFGA---DAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 316 g~~f~~---~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
|..|+. .++|+|+|++.+++++++++++|.++++
T Consensus 337 g~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 337 GSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred chhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence 988864 2689999998799999999999999874
No 20
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=4.1e-42 Score=323.42 Aligned_cols=293 Identities=17% Similarity=0.231 Sum_probs=242.1
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|+++.|. ++||+++++++.. .|...+++++|++|+|+++++..++..++++||+ |++++|+|..+..+
T Consensus 60 ~~Y~~~~G~-----~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~----Vlv~~p~y~~~~~~ 130 (384)
T PRK12414 60 NQYAPMAGI-----AALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVHPGDE----VIYFEPSFDSYAPI 130 (384)
T ss_pred CCcCCCCCc-----HHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCE----EEEeCCCccchHHH
Confidence 569888998 9999999998764 4766666568999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcccccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC--
Q 018172 104 TDYLRSGLYKWDGDANTFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ-- 168 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~-- 168 (360)
++..|.+++.++++.+++.. ++++++|++++||||||.+++ +.+.++|+++++++|+||+|.+..
T Consensus 131 ~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~ 210 (384)
T PRK12414 131 VRLQGATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFD 210 (384)
T ss_pred HHHcCCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCC
Confidence 99999999999877544322 357899999999999999998 245567788999999999998422
Q ss_pred ---CCcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchh
Q 018172 169 ---YTPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 169 ---~~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
..++. ...+++++++||||.||+||+|+||+++ ++++++.+.+......++.+.+.|.++..+++. . .
T Consensus 211 ~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~-~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~---~--~ 284 (384)
T PRK12414 211 GARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLA-PAELMDEIRKVHQFMVFSADTPMQHAFAEALAE---P--A 284 (384)
T ss_pred CCCccCcccCcCccCcEEEEecccccccCccceEEEEec-CHHHHHHHHHHHhheecCCCcHHHHHHHHHhcC---C--h
Confidence 11222 2346899999999999999999999999 899999999888777889999999999998872 2 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-----h-HHHHHHHHhhCeeeeCC
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-----D-EDCEKLLRAERIMARGG 316 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~l~~~gI~~~pg 316 (360)
+..+.++.++++++.+.+.|++++ +.+..+.|++ |+|++++. . +.+.++|.++||.+.||
T Consensus 285 ~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~gg~-------------~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg 350 (384)
T PRK12414 285 SYLGLGAFYQRKRDLLARELAGSR-FELLPSEGSF-------------FMLARFRHFSDESDSDFVLRLIRDARVATIPL 350 (384)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC-CeecCCCcce-------------EEEEcccccCCCCHHHHHHHHHHhCCEEEecc
Confidence 445688999999999999999984 5555566665 67776542 2 66668888999999999
Q ss_pred CCCCC---CCCeEEEEecCChHHHHHHHHHHHH
Q 018172 317 RRFGA---DAKYARVSMLSREEIFNIFLERLSA 346 (360)
Q Consensus 317 ~~f~~---~~~~~R~s~~~~~e~~~~~~~~l~~ 346 (360)
..|+. ..+++|++++.++|++++++++|.+
T Consensus 351 ~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 351 SAFYTDGTDTGLIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred hhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 98853 2579999998899999999999875
No 21
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=2.2e-42 Score=325.05 Aligned_cols=300 Identities=17% Similarity=0.221 Sum_probs=246.7
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|++..|. ++||++++++++.. |..++++++|++|+|+++++++++..++++||+ |++++|+|+.+..
T Consensus 50 ~~~Y~~~~g~-----~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~----vl~~~p~y~~~~~ 120 (378)
T PRK07682 50 YTSYTANAGL-----LELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIINPGDE----VLIVEPSFVSYAP 120 (378)
T ss_pred CCCCCCCCCc-----HHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCE----EEEeCCCchhhHH
Confidence 3558888887 99999999998754 777776668999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCCcc---cccc-------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCC
Q 018172 103 ETDYLRSGLYKWDGDAN---TFDK-------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQ 168 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~~---~~~~-------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~ 168 (360)
.++..|.+++.++.+.+ +++. .++++++++++||||||.+++. .+.++|+++++++|+||+|.+..
T Consensus 121 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~ 200 (378)
T PRK07682 121 LVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELT 200 (378)
T ss_pred HHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcc
Confidence 99999999998876521 2221 3578999999999999999983 45677888999999999998532
Q ss_pred C-------CcCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCch
Q 018172 169 Y-------TPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 169 ~-------~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
+ ..+.+..++++++.||||.|++||+|+||+++ ++++++.+.+.......+.+.+.|.++.++++. ..
T Consensus 201 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~-~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~--~~-- 275 (378)
T PRK07682 201 YDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAA-PVYFSEAMLKIHQYSMMCAPTMAQFAALEALRA--GN-- 275 (378)
T ss_pred cCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhc-CHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhC--Ch--
Confidence 2 11223347899999999999999999999998 899999998877666678899999999998872 22
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC----ch-HHHHHHHHhhCeeeeCC
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK----ED-EDCEKLLRAERIMARGG 316 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~l~~~gI~~~pg 316 (360)
.++++.++.++++++++.+.|+++ ++.+..|.|++ |+|+.++ +. +....+++++||.++||
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~g~~-------------~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg 341 (378)
T PRK07682 276 DDVIRMRDSYRKRRNFFVTSFNEI-GLTCHVPGGAF-------------YAFPSISSTGLSSEEFAEQLLLEEKVAVVPG 341 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CCccCCCCeeE-------------EEEEeccCCCCCHHHHHHHHHHhCCEEEcCc
Confidence 678999999999999999999998 45666666665 6777653 22 44445566789999999
Q ss_pred CCCCC-CCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 317 RRFGA-DAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 317 ~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
..|+. .++++|||++.+++++++++++|++++++.
T Consensus 342 ~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 342 SVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred hhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 99975 368999999888999999999999998754
No 22
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=5.3e-42 Score=328.76 Aligned_cols=302 Identities=18% Similarity=0.306 Sum_probs=242.1
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHhh-cCC--CCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCC
Q 018172 23 LMSYLSDMGNVCWFLVPELAEAINNLHHV-VDN--AVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQ 99 (360)
Q Consensus 23 ~~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~--~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~ 99 (360)
.+.+|++..|. ++||+++++|++. ++. ++++ ++|++|+|+++++..++.+++++||. |++++|+|+.
T Consensus 78 ~l~~Y~~~~G~-----~~LR~aiA~~l~~~~~~~~~v~~-~~Iiit~Ga~~al~~l~~~l~~pGd~----Vlv~~P~Y~~ 147 (468)
T PLN02450 78 ELALFQDYHGL-----PAFKNALAEFMSEIRGNKVTFDP-NKLVLTAGATSANETLMFCLAEPGDA----FLLPTPYYPG 147 (468)
T ss_pred hhhcCCCCCCh-----HHHHHHHHHHHHHhhCCCCCcCh-HHeEEccChHHHHHHHHHHhCCCCCE----EEECCCCCCc
Confidence 45679999998 9999999999874 343 3455 58999999999999999999999998 9999999999
Q ss_pred cHHHHH-HhCCeeeeecCC-ccccccC---------------CCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEE
Q 018172 100 YPAETD-YLRSGLYKWDGD-ANTFDKN---------------NGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKL 158 (360)
Q Consensus 100 ~~~~~~-~~g~~~~~~~~~-~~~~~~~---------------~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~l 158 (360)
+...+. ..|++++.++.+ .+++..+ .++++|+++|||||||.++++ .+.++|+++++++
T Consensus 148 ~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~i 227 (468)
T PLN02450 148 FDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHL 227 (468)
T ss_pred hHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEE
Confidence 988888 589999999875 3454331 278999999999999999993 4556788899999
Q ss_pred EEeecccCCC-----CCcCC-----------CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCC
Q 018172 159 IHDLAYYWPQ-----YTPIT-----------GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVS 222 (360)
Q Consensus 159 i~D~ay~~~~-----~~~~~-----------~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~ 222 (360)
|+||+|.+.. +.+.. +..+++++++||||.|+++|+|+||++++++.+.+.+.+.... .+.+
T Consensus 228 I~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~~--~~~s 305 (468)
T PLN02450 228 ISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSSF--GLVS 305 (468)
T ss_pred EEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhhc--CCCC
Confidence 9999998421 21211 1357899999999999999999999999546667777665432 3578
Q ss_pred hHHHHHHHHHhcccCCCch-hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch--
Q 018172 223 KESQLRAAKILGIVSDDYP-NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-- 299 (360)
Q Consensus 223 ~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 299 (360)
.++|.++..+|+. +.+. .++++.+++++++++.+.+.|+++ ++.+..+.+++ |+|++++..
T Consensus 306 ~~~Q~a~~~~L~~--~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~~~~~g~-------------flwi~l~~~~~ 369 (468)
T PLN02450 306 SQTQYLLSALLSD--KKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCLKSNAGL-------------FCWVDMRHLLK 369 (468)
T ss_pred HHHHHHHHHHhCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCceE-------------EEEEEchHhcC
Confidence 8999999998872 2222 478899999999999999999998 45665666665 778877521
Q ss_pred --------HHHHHHHHhhCeeeeCCCCCCC-CCCeEEEEecC-ChHHHHHHHHHHHHHHhchh
Q 018172 300 --------EDCEKLLRAERIMARGGRRFGA-DAKYARVSMLS-REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 300 --------~~~~~~l~~~gI~~~pg~~f~~-~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~~ 352 (360)
+.+.+++.++||.+.||+.|+. .++|+|++++. +++++++++++|++++.+.+
T Consensus 370 ~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 370 SNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred cCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHhcc
Confidence 2345566778999999999975 47899999986 89999999999999997654
No 23
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.3e-42 Score=325.25 Aligned_cols=295 Identities=19% Similarity=0.252 Sum_probs=241.8
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|+++.|. ++||++++++++.+ +..++++++|++|+|+++++..++..++++||+ |++++|+|+.+..
T Consensus 66 ~~~Y~~~~G~-----~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~----Vlv~~P~y~~~~~ 136 (394)
T PRK05942 66 NHGYPPFEGT-----ASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDV----VLVPSPAYPAHFR 136 (394)
T ss_pred CccCCCCCCC-----HHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCE----EEEcCCCCcchHH
Confidence 3569999998 99999999998754 766777656999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCCcc-cccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCC
Q 018172 103 ETDYLRSGLYKWDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQ 168 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~ 168 (360)
.+...|++++.++.+.+ ++.. +++++++++++||||||.++++ .+.++|+++++++|+||+|.+..
T Consensus 137 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~ 216 (394)
T PRK05942 137 GPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELA 216 (394)
T ss_pred HHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhc
Confidence 99999999999987643 3221 3589999999999999999983 45567888999999999998432
Q ss_pred C-----CcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCc
Q 018172 169 Y-----TPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 169 ~-----~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
+ .++. ...+++++++||||.||++|+|+||+++ ++++++.+...+.....+.+.+.|.++..+++..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~-~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---- 291 (394)
T PRK05942 217 FDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVG-NRHIIQGLRTLKTNLDYGIFSALQKAAETALQLP---- 291 (394)
T ss_pred cCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeec-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc----
Confidence 1 2222 2345678999999999999999999998 8999999998877667788999999999988632
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---h-HHHHHHHHhhCeeeeCC
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---D-EDCEKLLRAERIMARGG 316 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~l~~~gI~~~pg 316 (360)
+.++++.++.++++++++.+.|+.+ ++.+..+.+++ |+|++++. . +.+.++|.++||.++||
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~-------------f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g 357 (394)
T PRK05942 292 DSYLQQVQERYRTRRDFLIQGLGEL-GWNIPPTKATM-------------YLWVPCPVGMGSTDFALNVLQKTGVVVTPG 357 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeee-------------EEEEECCCCCCHHHHHHHHHHHCCEEEeCC
Confidence 3889999999999999999999887 45555555554 78888864 2 45566788899999999
Q ss_pred CCCCC-CCCeEEEEecCChHHHHHHHHHHHH
Q 018172 317 RRFGA-DAKYARVSMLSREEIFNIFLERLSA 346 (360)
Q Consensus 317 ~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~ 346 (360)
..|+. .++++|++++.+.+.+.+++++|.+
T Consensus 358 ~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~ 388 (394)
T PRK05942 358 NAFGEGGEGYVRISLIADCDRLGEALDRLKQ 388 (394)
T ss_pred hhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 99974 4689999997677777777777755
No 24
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=3.8e-42 Score=331.99 Aligned_cols=305 Identities=17% Similarity=0.194 Sum_probs=244.4
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhc-CCCCCCCceEEEeCCCCCCcH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALS-SPGGPEPISVVSAAPYYSQYP 101 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~-~~gd~~~~~vl~~~p~~~~~~ 101 (360)
...|++..|. ++||++++++++. +|.++++ ++|++|+|+++++++++..++ ++||. |+++.|+|+.+.
T Consensus 108 ~~~Y~~~~G~-----~~LR~aia~~~~~~~g~~~~~-~~I~it~Ga~~al~~~~~~l~~~~gD~----Vlv~~P~y~~y~ 177 (481)
T PTZ00377 108 TGAYTDSAGY-----PFVRKAVAAFIERRDGVPKDP-SDIFLTDGASSGIKLLLQLLIGDPSDG----VMIPIPQYPLYS 177 (481)
T ss_pred ccCcCcccCC-----HHHHHHHHHHHHHhcCCCCCh-hhEEEcCCHHHHHHHHHHHhccCCCCE----EEECCCCchhHH
Confidence 3569999998 9999999999874 5777766 589999999999999999998 79998 999999999999
Q ss_pred HHHHHhCCeeeeecCCc-ccccc---------CC------CeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEe
Q 018172 102 AETDYLRSGLYKWDGDA-NTFDK---------NN------GAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHD 161 (360)
Q Consensus 102 ~~~~~~g~~~~~~~~~~-~~~~~---------~~------~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D 161 (360)
.+++..|.+++.++++. +++.. ++ ++|++++++||||||.+++ +.+.++|+++++++|+|
T Consensus 178 ~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~D 257 (481)
T PTZ00377 178 AAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMAD 257 (481)
T ss_pred HHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 99999999999998774 33322 11 7899999999999999999 35567788899999999
Q ss_pred ecccCCCC------CcCC----CC------CCccEEEeccccc-cCCCCceEEEEee--cCHHHHHHHHHHHhhccccCC
Q 018172 162 LAYYWPQY------TPIT----GA------ADHDIMLFTLSKC-TGHAGSRIGWALV--KDTEVARKMTRFIELGSIGVS 222 (360)
Q Consensus 162 ~ay~~~~~------~~~~----~~------~~~~i~~~S~sK~-~~~~G~r~G~~~~--~~~~~~~~l~~~~~~~~~~~~ 222 (360)
|+|.+..+ .++. +. ..++++++||||. +++||||+||+++ .++++++.+.+.+. ...+.+
T Consensus 258 e~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~-~~~~~~ 336 (481)
T PTZ00377 258 EVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLAS-INLCSN 336 (481)
T ss_pred hhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhh-eecCCC
Confidence 99985222 1211 11 1268999999997 6999999999986 37899999988764 345789
Q ss_pred hHHHHHHHHHhcccC---CC---chhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccC
Q 018172 223 KESQLRAAKILGIVS---DD---YPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLES 296 (360)
Q Consensus 223 ~~~~~~~~~~l~~~~---~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (360)
.++|.++..+++... .. +..++.+.++.++++++.+.+.|++++++.+..|.|++ |+|+++
T Consensus 337 ~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~-------------fl~~~~ 403 (481)
T PTZ00377 337 VVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAM-------------YAFPRI 403 (481)
T ss_pred hHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeE-------------EEEeec
Confidence 999999999886321 11 22345555567899999999999998778888888887 555433
Q ss_pred C---------------ch-HHHHHHHHhhCeeeeCCCCCCC--CCCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 297 K---------------ED-EDCEKLLRAERIMARGGRRFGA--DAKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 297 ~---------------~~-~~~~~~l~~~gI~~~pg~~f~~--~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
+ +. ..+..+|+++||.++||+.|+. ..+++|+|++.++|++++++++|.+++.+..
T Consensus 404 ~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~~~~~ 477 (481)
T PTZ00377 404 ELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFHESFM 477 (481)
T ss_pred cCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 1 12 3467888899999999999974 3569999998788899999999999998654
No 25
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=9.7e-42 Score=321.18 Aligned_cols=300 Identities=19% Similarity=0.207 Sum_probs=248.7
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. ++||++++++++.. |..++++.+|++|+|+++++.+++..++++||+ |+++.|+|..+...
T Consensus 59 ~~Y~~~~g~-----~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~----Vl~~~p~y~~~~~~ 129 (387)
T PRK07683 59 TSYTHNAGL-----LELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTE----VILPAPIYPGYEPI 129 (387)
T ss_pred CCCCCCCCC-----HHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCE----EEEcCCCccchHHH
Confidence 468888887 99999999998744 777776548999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcccccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC--
Q 018172 104 TDYLRSGLYKWDGDANTFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ-- 168 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~-- 168 (360)
++..|++++.++.+.+++.. +++++++++++||||||.+++ +.+.++|+++++++|+|++|.+..
T Consensus 130 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~ 209 (387)
T PRK07683 130 IRLCGAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYE 209 (387)
T ss_pred HHHcCCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeC
Confidence 99999999999887665533 257899999999999999998 345577888999999999998532
Q ss_pred --CCcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 169 --YTPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 169 --~~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
..++. +..+++++++||||+||+||+|+||+++ ++++++.+.........+++.+.|.++.++++. +. .+
T Consensus 210 ~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~--~~ 284 (387)
T PRK07683 210 QPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFA-PSYLAKHILKVHQYNVTCASSISQYAALEALTA--GK--DD 284 (387)
T ss_pred CCcCChhhccCCcCCeEEEeeccccccCccceeEEEEc-CHHHHHHHHHHHHhccCCCChHHHHHHHHHHhC--Ch--HH
Confidence 12222 2456899999999999999999999998 899999998776655567788999999888863 32 67
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----h-HHHHHHHHhhCeeeeCCCC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----D-EDCEKLLRAERIMARGGRR 318 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~l~~~gI~~~pg~~ 318 (360)
+++.++.++++++.+.+.|++. ++.+..+.+++ |+|+.++. . +.+..+++++||.++||+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~ 350 (387)
T PRK07683 285 AKMMRHQYKKRRDYVYNRLISM-GLDVEKPTGAF-------------YLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSA 350 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCcccCCCeeE-------------EEEEecccCCCCHHHHHHHHHHhCCEEEcCchh
Confidence 8899999999999999999987 45555566555 67776653 2 4555678889999999999
Q ss_pred CCC-CCCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 319 FGA-DAKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 319 f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
|+. .++++||+++.+++++++++++|.++++++.
T Consensus 351 f~~~~~~~~Ri~~~~~~~~~~~al~~l~~~l~~~~ 385 (387)
T PRK07683 351 FSEYGEGYVRLSYAYSIETLKEGLDRLEAFLQQKA 385 (387)
T ss_pred hCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhhc
Confidence 965 4689999998899999999999999987653
No 26
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=8.4e-42 Score=323.46 Aligned_cols=302 Identities=16% Similarity=0.216 Sum_probs=239.8
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
.++|++..|. ++||++++++++. +|..+++ ++|++|+|+++++.+++..++++||. |+++.|+|+.+..
T Consensus 67 ~~~Y~~~~G~-----~~lr~aia~~~~~~~g~~~~~-~~I~it~G~~~al~~~~~~l~~~gd~----v~v~~P~y~~~~~ 136 (409)
T PLN00143 67 FNSYAPTGGI-----LPARRAIADYLSNDLPYQLSP-DDVYLTLGCKHAAEIIIKVLARPEAN----ILLPRPGFPDVET 136 (409)
T ss_pred CCCCCCCCCC-----HHHHHHHHHHHHhhcCCCCCH-hhEEEecChHHHHHHHHHHHcCCCCE----EEEcCCCCcCHHH
Confidence 3569888888 9999999999764 4666766 48999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCC-cccccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCC
Q 018172 103 ETDYLRSGLYKWDGD-ANTFDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQ 168 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~-~~~~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~ 168 (360)
.++..|.+++.++++ .+++.. .+++++++++|||||||.++++ .+.++|+++++++|+||+|.+..
T Consensus 137 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~ 216 (409)
T PLN00143 137 YAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIV 216 (409)
T ss_pred HHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccc
Confidence 999999999998874 233322 3578999999999999999993 45567888999999999998522
Q ss_pred C-----CcCC--CCCCccEEEeccccccCCCCceEEEEeecC-HHH------HHHHHHHHhhccccCChHHHHHHHHHhc
Q 018172 169 Y-----TPIT--GAADHDIMLFTLSKCTGHAGSRIGWALVKD-TEV------ARKMTRFIELGSIGVSKESQLRAAKILG 234 (360)
Q Consensus 169 ~-----~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~-~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 234 (360)
+ .++. ...+++++++||||.|++||+|+||+++++ ..+ ++.+.+.... ....+.+.|.++.++++
T Consensus 217 ~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~ 295 (409)
T PLN00143 217 FGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNP-APFPPTFIQAAIPEILE 295 (409)
T ss_pred cCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHhc-cCCCCchHHHHHHHHHh
Confidence 1 2221 334589999999999999999999999843 333 3344444332 22357899999998886
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCccc-CCCCCcccccccccCCCCCCcccccCCc--------h-HHHHH
Q 018172 235 IVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGL-PEYPLEYCNFTGKFTNSHPGFAWLESKE--------D-EDCEK 304 (360)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~ 304 (360)
. ..+.++++.++.++++++.+.+.|+++++... ..|.|++ |+|++++. . +++.+
T Consensus 296 ~---~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~-------------f~w~~l~~~~~~~~~~~~~~~~~ 359 (409)
T PLN00143 296 K---TTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAF-------------FALVKLNLLLLEDIEDDMEFCLK 359 (409)
T ss_pred c---ChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeE-------------EEEEecchhhcCCCCCHHHHHHH
Confidence 2 12378999999999999999999988754432 2455555 88888852 3 55667
Q ss_pred HHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhchhc
Q 018172 305 LLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 305 ~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~~ 353 (360)
++.++||.++||..|+. ++++||+++.+++++++++++|.+++++..+
T Consensus 360 ll~~~gV~v~pg~~f~~-~~~iRi~~~~~~~~l~~al~rl~~~l~~~~~ 407 (409)
T PLN00143 360 LAKEESLIILPGVTVGL-KNWLRITFAVEQSSLEDGLGRLKSFCGRHAK 407 (409)
T ss_pred HHHhCCEEEeCccccCC-CCeEEEEEcCCHHHHHHHHHHHHHHHHHhcc
Confidence 88899999999999975 7899999988999999999999999976543
No 27
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=6.9e-42 Score=323.06 Aligned_cols=297 Identities=20% Similarity=0.270 Sum_probs=240.7
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhh-cCCC--CCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHV-VDNA--VSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY 100 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~--~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~ 100 (360)
...|+++.|. ++||++++++++. ++.+ ++++++|++|+|+++++.+++..++++||+ +.|++++|+|+.+
T Consensus 57 ~~~Y~~~~G~-----~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~--~~vlv~~P~y~~~ 129 (393)
T TIGR03538 57 LSTYPTTKGL-----PELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQA--PLVVMPNPFYQIY 129 (393)
T ss_pred cCCCCCCCCC-----HHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCc--ceEEecCCCCcch
Confidence 4569999998 9999999999754 3655 455458999999999999999999999974 2389999999999
Q ss_pred HHHHHHhCCeeeeecCCcc-cccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccC
Q 018172 101 PAETDYLRSGLYKWDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYW 166 (360)
Q Consensus 101 ~~~~~~~g~~~~~~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~ 166 (360)
..+++..|++++.++++.+ ++.. ..++++|++++||||||.+++ +.+.++|++++++||+||+|.+
T Consensus 130 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~ 209 (393)
T TIGR03538 130 EGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSE 209 (393)
T ss_pred HHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhh
Confidence 9999999999999988643 3432 247899999999999999999 3455677889999999999985
Q ss_pred CCCC------cC------C--CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHH
Q 018172 167 PQYT------PI------T--GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKI 232 (360)
Q Consensus 167 ~~~~------~~------~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 232 (360)
..+. +. . ...+++++++||||.|+++|+|+||+++ ++++++.+.+.....+.+.+.+.|.++.+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~ 288 (393)
T TIGR03538 210 LYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAG-DAEILKAFLRYRTYHGCAMPIPTQLASIAA 288 (393)
T ss_pred cccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEec-CHHHHHHHHHHHHhhccCcCHHHHHHHHHH
Confidence 3211 11 0 1356899999999999999999999998 899999998887766678889999998877
Q ss_pred hcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-ch-HHHHHHHHhhC
Q 018172 233 LGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-ED-EDCEKLLRAER 310 (360)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~l~~~g 310 (360)
+. .. .++++.++.++++++.+.+.|+++ +.+..|.+++ |+|++++ +. +.+..+++++|
T Consensus 289 l~---~~--~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~gg~-------------f~~~~~~~~~~~~~~~l~~~~g 348 (393)
T TIGR03538 289 WN---DE--QHVRENRALYREKFAAVLEILGQV--LDLELPDAGF-------------YLWPKVPGDDEAFARALYEEEN 348 (393)
T ss_pred hc---Ch--HHHHHHHHHHHHHHHHHHHHHHhh--CcccCCCeeE-------------EEEEECCCCHHHHHHHHHHHCC
Confidence 75 22 789999999999999999999876 3334455554 8899987 44 44445556789
Q ss_pred eeeeCCCCCCC-------CCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 311 IMARGGRRFGA-------DAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 311 I~~~pg~~f~~-------~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
|.+.||+.|+. ..+++|||++.+++++++++++|++++
T Consensus 349 V~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~ 393 (393)
T TIGR03538 349 VTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVEAAERIRSFI 393 (393)
T ss_pred EEEeCCccccccccCCCCCCCEEEEEecCCHHHHHHHHHHHHHhC
Confidence 99999998852 257999999889999999999998763
No 28
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=1e-41 Score=323.51 Aligned_cols=301 Identities=19% Similarity=0.187 Sum_probs=242.9
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhc-------CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCC
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVV-------DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPY 96 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~-------~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~ 96 (360)
...|+++.|. ++||++++++++.+ +..+++ ++|++|+|+++++.+++..++++||+ |+++.|+
T Consensus 68 ~~~Y~~~~G~-----~~Lr~aia~~~~~~~~~~~~~~~~~~~-~~i~it~G~~~al~~~~~~~~~~gd~----vlv~~P~ 137 (412)
T PTZ00433 68 CNGYPPTVGS-----PEAREAVATYWRNSFVHKESLKSTIKK-DNVVLCSGVSHAILMALTALCDEGDN----ILVPAPG 137 (412)
T ss_pred CCCCCCCCCc-----HHHHHHHHHHHHhhccccccccCCCCh-hhEEEeCChHHHHHHHHHHhcCCCCE----EEEccCC
Confidence 4579998888 99999999998753 455665 58999999999999999999999998 9999999
Q ss_pred CCCcHHHHHHhCCeeeeecCCcc---cccc-------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEee
Q 018172 97 YSQYPAETDYLRSGLYKWDGDAN---TFDK-------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDL 162 (360)
Q Consensus 97 ~~~~~~~~~~~g~~~~~~~~~~~---~~~~-------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ 162 (360)
|..+...++..|++++.++++.+ +++. .+++++|++++||||||.+++ +.+.++|+++|+++|+||
T Consensus 138 y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De 217 (412)
T PTZ00433 138 FPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDE 217 (412)
T ss_pred cccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEec
Confidence 99999999999999999987642 3322 257899999999999999998 245667888999999999
Q ss_pred cccCCCC-----CcCCC--CCCccEEEeccccccCCCCceEEEEeecC-----HHHHHHHHHHHhhccccCChHHHHHHH
Q 018172 163 AYYWPQY-----TPITG--AADHDIMLFTLSKCTGHAGSRIGWALVKD-----TEVARKMTRFIELGSIGVSKESQLRAA 230 (360)
Q Consensus 163 ay~~~~~-----~~~~~--~~~~~i~~~S~sK~~~~~G~r~G~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~ 230 (360)
+|.+..+ .++.. ...++++++||||+|++||+|+||+++.+ +++++.+.+... ...+.+.+.|.++.
T Consensus 218 ~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~ 296 (412)
T PTZ00433 218 IYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGM-LVCGPCSVVQAALG 296 (412)
T ss_pred cccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhh-ccCCCChHHHHHHH
Confidence 9985322 22222 22357899999999999999999999622 467777776553 34678999999999
Q ss_pred HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--------h-HH
Q 018172 231 KILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--------D-ED 301 (360)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~ 301 (360)
+++.. ..+.++++.++.++++++.+.+.|+++.++.+..|.+++ |+|++++. . +.
T Consensus 297 ~~l~~---~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~-------------f~~~~l~~~~~~~~~~~~~~ 360 (412)
T PTZ00433 297 EALLN---TPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSM-------------FLMSRLDLEKFRDIKSDVEF 360 (412)
T ss_pred HHHhc---CcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeE-------------EEEEEechhhcCCCCCHHHH
Confidence 88863 235899999999999999999999987555555565555 78877652 2 44
Q ss_pred HHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 302 CEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 302 ~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
+..+++++||.++||..|+. ++++|++++..+|++++++++|.+++++.+
T Consensus 361 ~~~ll~~~gV~v~pg~~f~~-~~~iRis~~~~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 361 YEKLLEEENVQVLPGEIFHM-PGFTRLTISRPVEVLREAVERIKAFCERHK 410 (412)
T ss_pred HHHHHHhcCEEEeCccccCC-CCeEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence 45555578999999999975 789999998889999999999999997655
No 29
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=1.3e-41 Score=316.37 Aligned_cols=294 Identities=17% Similarity=0.194 Sum_probs=243.1
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcCCC---CCCCceEEEeCCCCCC
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSSPG---GPEPISVVSAAPYYSQ 99 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~g---d~~~~~vl~~~p~~~~ 99 (360)
+..|+++.|. ++||++++++++.. |++++++++|++|+|++++++.++..++++| |+ |+++.|+|+.
T Consensus 29 ~~~Y~~~~G~-----~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~~d~----Vl~~~p~y~~ 99 (350)
T TIGR03537 29 VSQYPSALGT-----KALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRR----VIFGTPGYPV 99 (350)
T ss_pred cCCCCCCCCC-----HHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCCCCCCce----EEEcCCCCcc
Confidence 4569998988 99999999998754 8777775589999999999999999999887 46 9999999999
Q ss_pred cHHHHHHhCCeeeeecCCc-ccccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeeccc
Q 018172 100 YPAETDYLRSGLYKWDGDA-NTFDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYY 165 (360)
Q Consensus 100 ~~~~~~~~g~~~~~~~~~~-~~~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~ 165 (360)
+...++..|++++.++.+. +++.. .++++++++++||||||.+++. .+.++|+++++++|+||+|.
T Consensus 100 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~ 179 (350)
T TIGR03537 100 YERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYT 179 (350)
T ss_pred hHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEecccc
Confidence 9999999999999998863 45422 3578999999999999999983 45567888999999999997
Q ss_pred CCCC----CcCC-CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCc
Q 018172 166 WPQY----TPIT-GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 166 ~~~~----~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
+..+ .+.. ...++++++.||||.+|++|+|+||+++ ++++.+.+.......+.+.+...|.++.+.+. ..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~- 254 (350)
T TIGR03537 180 EIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAG-DEKLISFLRKLRANFGVASPDFVQAAAKAAWS---DD- 254 (350)
T ss_pred ccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeec-CHHHHHHHHHHHHhhccCCCHHHHHHHHHHhC---Cc-
Confidence 4211 1111 2356899999999999999999999998 89999999988776667777778888877665 22
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCC
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGR 317 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~ 317 (360)
.++++.++.++++++.+.+.|+.+ ++.+..|.+++ |+|+++++. ..+.+.|.++||.++||.
T Consensus 255 -~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~~~~g~~-------------~~~~~~~~~~~~~~l~~~L~~~gv~v~~g~ 319 (350)
T TIGR03537 255 -NHVLERRKIFKRKRDLFIEFFNKV-GLEYLYPDATF-------------YLWVKVPSGIDAKDYALRLLENGIVVAPGE 319 (350)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeEE-------------EEEEECCCCCCHHHHHHHHHHCCEEEcCch
Confidence 788999999999999999999988 45555555554 788888752 667777778999999999
Q ss_pred CCCC-CCCeEEEEecCChHHHHHHHHHHHH
Q 018172 318 RFGA-DAKYARVSMLSREEIFNIFLERLSA 346 (360)
Q Consensus 318 ~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~ 346 (360)
.|+. .++++|++++.+++++++++++|++
T Consensus 320 ~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 320 NFGSGEEGYVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred hhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence 9975 3689999997788999999998875
No 30
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-41 Score=320.63 Aligned_cols=298 Identities=19% Similarity=0.240 Sum_probs=245.0
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|+++.|. ++||++++++++. +|..++++++|++|+|+++++..++..++++||+ |+++.|+|+.+..+
T Consensus 57 ~~Y~~~~G~-----~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~----Vlv~~p~y~~~~~~ 127 (387)
T PRK08912 57 NQYPPMMGL-----PELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDE----VVLFQPLYDAYLPL 127 (387)
T ss_pred CCCCCCCCc-----HHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCE----EEEeCCCchhhHHH
Confidence 569999988 9999999998764 4777776558999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcccc--cc-------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCC--
Q 018172 104 TDYLRSGLYKWDGDANTF--DK-------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQ-- 168 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~~--~~-------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~-- 168 (360)
++..|++++.++.+.+++ +. +++++++++++||||||.+++. .+.++|+++++++|+||+|.+..
T Consensus 128 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~ 207 (387)
T PRK08912 128 IRRAGGVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFD 207 (387)
T ss_pred HHHcCCEEEEEecCcccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccC
Confidence 999999999888764322 21 3578999999999999999982 45677888999999999997421
Q ss_pred ---CCcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchh
Q 018172 169 ---YTPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 169 ---~~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
..++. +..+++++++||||.||++|+|+||+++ ++++++.+........++.++..|.++.+++. .. ..
T Consensus 208 ~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~--~~--~~ 282 (387)
T PRK08912 208 GRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCA-APPLLRVLAKAHQFLTFTTPPNLQAAVAYGLG--KP--DD 282 (387)
T ss_pred CCCCcChhhCCCccCceEEEeechhhccCcCceeEEEec-CHHHHHHHHHHHhhccccCChHHHHHHHHHHh--CC--HH
Confidence 12222 2356899999999999999999999999 89999999888776667888888988888775 22 37
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc------hH-HHHHHHHhhCeeeeC
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE------DE-DCEKLLRAERIMARG 315 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~l~~~gI~~~p 315 (360)
++++.++.++++++.+.+.|+.+ ++.+..+.+++ |+|++++. .. .+..+++++||.+.|
T Consensus 283 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~g~~-------------~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~p 348 (387)
T PRK08912 283 YFEGMRADLARSRDRLAAGLRRI-GFPVLPSQGTY-------------FLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIP 348 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcce-------------EEEecccccCCCCCHHHHHHHHHhcCCEEEec
Confidence 88999999999999999999998 45655555554 77887753 23 444556778999999
Q ss_pred CCCCCC---CCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 316 GRRFGA---DAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 316 g~~f~~---~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
|..|+. ..+++|++++.+++.+++++++|.+++.+
T Consensus 349 g~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 349 VSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAARRR 386 (387)
T ss_pred chhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 998853 35799999988999999999999998875
No 31
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=9.9e-42 Score=323.41 Aligned_cols=296 Identities=20% Similarity=0.221 Sum_probs=233.3
Q ss_pred cccccCCCCccccccHHHHHHHHHHH-hhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLH-HVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~-~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|+++.|. ++||+++++++ ..+|..++++ +|++|+|+++++.++. .++++||+ |++++|+|+.+..
T Consensus 69 ~~~Y~~~~G~-----~~LR~aia~~~~~~~g~~~~~~-~I~it~Ga~~al~~l~-~~~~~gd~----V~v~~P~Y~~~~~ 137 (409)
T PRK07590 69 FRGYGPEQGY-----DFLREKIAENDYQARGCDISAD-EIFISDGAKCDTGNIL-DIFGPDNT----IAVTDPVYPVYVD 137 (409)
T ss_pred ccCCCCCCCC-----HHHHHHHHHHHHHhcCCcCChh-hEEECCCHHHHHHHHH-HhcCCCCE----EEEeCCCCcchHH
Confidence 3468888888 99999999985 4667777775 8999999999999865 56689998 9999999999999
Q ss_pred HHHHhCCe-----------eeeecCCcc-cccc---CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeec
Q 018172 103 ETDYLRSG-----------LYKWDGDAN-TFDK---NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLA 163 (360)
Q Consensus 103 ~~~~~g~~-----------~~~~~~~~~-~~~~---~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~a 163 (360)
+++..|.+ ++.++++.+ ++.. .+++|+|++++||||||.+++. .+.++|++++++||+||+
T Consensus 138 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~ 217 (409)
T PRK07590 138 TNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPEEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAA 217 (409)
T ss_pred HHHHcCCcccccccccccceeEeecccccCCcccCcccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEcc
Confidence 99999987 888888743 4544 2578999999999999999993 455678889999999999
Q ss_pred ccCCC-----CCcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHH------------HHHHhhccccCCh
Q 018172 164 YYWPQ-----YTPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKM------------TRFIELGSIGVSK 223 (360)
Q Consensus 164 y~~~~-----~~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l------------~~~~~~~~~~~~~ 223 (360)
|.+.. ..++. ...+++++++||||+||+||+|+||+++ ++++++.+ .........+.+.
T Consensus 218 Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~-~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 296 (409)
T PRK07590 218 YEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVV-PKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSY 296 (409)
T ss_pred chhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEc-CHHHhhhccccchhhhHHHHHHHHhhcccCcCH
Confidence 98421 12222 2235789999999999999999999999 78888732 1212212236788
Q ss_pred HHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch----
Q 018172 224 ESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---- 299 (360)
Q Consensus 224 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 299 (360)
+.|.++.+++.. ..+.++++.++.++++++.+.+.|+.+ ++.+..+.+++ |+|+++++.
T Consensus 297 ~~q~a~~~~l~~---~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~g~~-------------f~wi~~~~~~~~~ 359 (409)
T PRK07590 297 IVQRAAEAVYSP---EGKAQIKELIDYYMENAKIIREGLESA-GFEVYGGVNAP-------------YIWVKTPDGMSSW 359 (409)
T ss_pred HHHHHHHHHhcC---CcHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCcce-------------EEEEECCCCCCHH
Confidence 999999887762 123789999999999999999999998 35544444444 889998752
Q ss_pred HHHHHHHHhhCeeeeCCCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 300 EDCEKLLRAERIMARGGRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 300 ~~~~~~l~~~gI~~~pg~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
+.+..+++++||.++||..|+. ..+++||++..+++++++++++|.+++
T Consensus 360 ~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~ 409 (409)
T PRK07590 360 DFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGSRENVLEAMERIKKAL 409 (409)
T ss_pred HHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCCHHHHHHHHHHHHhhC
Confidence 3445556678999999999975 357999998678999999999998753
No 32
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=2.4e-41 Score=320.46 Aligned_cols=301 Identities=18% Similarity=0.251 Sum_probs=246.1
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|++..|. ++||++++++++. +|..+++ ++|++|+|+++++.+++..++++||+ |++++|+|+.+..
T Consensus 66 ~~~Y~~~~G~-----~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~----Vlv~~p~y~~~~~ 135 (409)
T PLN02656 66 FNGYAPTVGL-----PQARRAIAEYLSRDLPYKLSL-DDVFITSGCTQAIDVALSMLARPGAN----ILLPRPGFPIYEL 135 (409)
T ss_pred CCCCCCCCCC-----HHHHHHHHHHHHHhcCCCCCc-ccEEEeCChHHHHHHHHHHHhCCCCe----EEEeCCCCCcHHH
Confidence 3568888888 9999999999864 4666666 48999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCCc-ccccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC
Q 018172 103 ETDYLRSGLYKWDGDA-NTFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ 168 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~-~~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~ 168 (360)
.++..|++++.++++. +++.. +++++++++++||||||.+++ +.+.++|+++++++|+|++|.+..
T Consensus 136 ~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~ 215 (409)
T PLN02656 136 CAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLA 215 (409)
T ss_pred HHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcc
Confidence 9999999999988753 23222 357899999999999999998 345677888999999999998532
Q ss_pred C-----CcCC--CCCCccEEEeccccccCCCCceEEEEeec-------CHHHHHHHHHHHhhccccCChHHHHHHHHHhc
Q 018172 169 Y-----TPIT--GAADHDIMLFTLSKCTGHAGSRIGWALVK-------DTEVARKMTRFIELGSIGVSKESQLRAAKILG 234 (360)
Q Consensus 169 ~-----~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 234 (360)
+ .++. +...++++++||||.|++||+|+||++++ ++++++.+.+.... ..+.+.+.|.++..+++
T Consensus 216 ~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~ 294 (409)
T PLN02656 216 FGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDI-LGGPATFIQAAVPTILE 294 (409)
T ss_pred cCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHHHhh-hcCCCHHHHHHHHHHHh
Confidence 2 2221 34568999999999999999999999984 25788888876653 34678999999999887
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCccc-CCCCCcccccccccCCCCCCcccccCC--------ch-HHHHH
Q 018172 235 IVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGL-PEYPLEYCNFTGKFTNSHPGFAWLESK--------ED-EDCEK 304 (360)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~ 304 (360)
. ..+.++++.++.++++++.+.+.|+.+++... ..|.|++ |+|++++ +. +++.+
T Consensus 295 ~---~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~-------------~~w~~l~~~~~~~~~~~~~~~~~ 358 (409)
T PLN02656 295 Q---TDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSM-------------AVMVKLNLSLLEDISDDIDFCFK 358 (409)
T ss_pred c---CcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEE-------------EEEEecchhhcCCCCCHHHHHHH
Confidence 3 12478999999999999999999998854432 3566665 6777764 23 45678
Q ss_pred HHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 305 LLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 305 ~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
++.++||.++||+.|+. ++++|++++.++|++++++++|++++.+.+
T Consensus 359 ~l~~~gV~v~pg~~fg~-~~~iRi~~~~~~e~l~eal~rl~~~~~~~~ 405 (409)
T PLN02656 359 LAREESVIILPGTAVGL-KNWLRITFAADPSSLEEALGRIKSFYLRHS 405 (409)
T ss_pred HHHhCCEEEecchhcCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHHhc
Confidence 88999999999999985 789999998899999999999999987654
No 33
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1.9e-41 Score=322.94 Aligned_cols=300 Identities=17% Similarity=0.182 Sum_probs=236.0
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|++..|. ++||++++++++.+ |..++++ +|++|+|+++++..++. ++++||. |++++|+|+.+..
T Consensus 66 ~~~Y~~~~G~-----~~LReaia~~~~~~~g~~~~~~-~I~it~G~~~al~~~~~-l~~~Gd~----Vlv~~P~Y~~~~~ 134 (433)
T PRK06855 66 SYGYCPTKGV-----LETREFLAELNNKRGGAQITPD-DIIFFNGLGDAIAKIYG-LLRREAR----VIGPSPAYSTHSS 134 (433)
T ss_pred CCCCCCCCCC-----HHHHHHHHHHHHhccCCCCCHh-HEEEcCcHHHHHHHHHH-hcCCCCe----EEEeCCCCchHHH
Confidence 3469999998 99999999998754 7777764 89999999999999985 7899998 9999999999775
Q ss_pred HH-HHhCCeeeeecCCc-ccccc-----------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeeccc
Q 018172 103 ET-DYLRSGLYKWDGDA-NTFDK-----------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYY 165 (360)
Q Consensus 103 ~~-~~~g~~~~~~~~~~-~~~~~-----------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~ 165 (360)
.. ...|++++.++++. +++.. .++++++++++||||||.+++. .+.++|++++++||+||+|.
T Consensus 135 ~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~ 214 (433)
T PRK06855 135 AEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYN 214 (433)
T ss_pred HHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 43 34588888887763 33321 1467899999999999999993 45577888999999999998
Q ss_pred CCC-----CCcCCC--CCCccEEEeccccccCCCCceEEEEeec----CH---HHHHHHHHHHhhccccCChHHHHHHHH
Q 018172 166 WPQ-----YTPITG--AADHDIMLFTLSKCTGHAGSRIGWALVK----DT---EVARKMTRFIELGSIGVSKESQLRAAK 231 (360)
Q Consensus 166 ~~~-----~~~~~~--~~~~~i~~~S~sK~~~~~G~r~G~~~~~----~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~ 231 (360)
+.. .+++.. ...++++++||||.|++||+|+||++++ ++ .+++.+..... ...+.+.+.|.++.+
T Consensus 215 ~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~ 293 (433)
T PRK06855 215 NIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPR 293 (433)
T ss_pred ccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHH
Confidence 532 222221 2236799999999999999999999973 22 23344433332 245678899999999
Q ss_pred HhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-------------
Q 018172 232 ILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE------------- 298 (360)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 298 (360)
+++ .+.++.++++.++.+++|++.+.+.|++++++.+..|.|++ |+|+++++
T Consensus 294 ~l~--~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~-------------~~w~~l~~~~~~~~~~~~~~~ 358 (433)
T PRK06855 294 IMS--HPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAF-------------YMTVVFEDGVLNNKQSLPIEN 358 (433)
T ss_pred hhc--CCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeE-------------EEeeccccccccccccCCcch
Confidence 887 34456899999999999999999999988666667777777 66666652
Q ss_pred -----------------h-HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHHhc
Q 018172 299 -----------------D-EDCEKLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 299 -----------------~-~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~ 350 (360)
. +++..++.++||.+.||..|+....++|+|++. +.|++++++++|.+++.+
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 359 PEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred hhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHHHHHHHHH
Confidence 2 456678889999999999997645579999987 999999999999999864
No 34
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.3e-41 Score=327.17 Aligned_cols=302 Identities=17% Similarity=0.297 Sum_probs=238.5
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHhh-cC--CCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCC
Q 018172 23 LMSYLSDMGNVCWFLVPELAEAINNLHHV-VD--NAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQ 99 (360)
Q Consensus 23 ~~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~--~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~ 99 (360)
....|++..|. ++||+++++|++. +| .+++++ +|++|+|+++++..++.+|+++||. |+++.|+|+.
T Consensus 86 ~~~~y~~~~G~-----~~LR~aiA~~l~~~~g~~v~v~pe-~Ivit~Ga~~al~~l~~~l~~pGD~----Vlv~~P~Y~~ 155 (496)
T PLN02376 86 DIANFQDYHGL-----KKFRQAIAHFMGKARGGKVTFDPE-RVVMSGGATGANETIMFCLADPGDV----FLIPSPYYAA 155 (496)
T ss_pred hhhccCCCCCc-----HHHHHHHHHHHHHHhCCCCcCChh-hEEEccchHHHHHHHHHHhCCCCCE----EEECCCCccc
Confidence 44568888998 9999999999874 35 456664 8999999999999999999999998 9999999999
Q ss_pred cHHHHH-HhCCeeeeecCCc-c--cccc-------------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEE
Q 018172 100 YPAETD-YLRSGLYKWDGDA-N--TFDK-------------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKL 158 (360)
Q Consensus 100 ~~~~~~-~~g~~~~~~~~~~-~--~~~~-------------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~l 158 (360)
+...+. ..|++++.++++. + ++.. ..++|+|+++|||||||.++++ .+.++|+++++++
T Consensus 156 ~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~l 235 (496)
T PLN02376 156 FDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHL 235 (496)
T ss_pred hHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 999887 5899999998753 2 2211 2478999999999999999993 4556788899999
Q ss_pred EEeecccCCC-----CCcCC---C-------CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCCh
Q 018172 159 IHDLAYYWPQ-----YTPIT---G-------AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSK 223 (360)
Q Consensus 159 i~D~ay~~~~-----~~~~~---~-------~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~ 223 (360)
|+||+|.+.. +.++. . ..+++++++||||.||+||+|+||+++.++.+.+.+...... ...+.
T Consensus 236 I~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~~--~~vs~ 313 (496)
T PLN02376 236 VVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSSF--GLVSS 313 (496)
T ss_pred EEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHhhc--CCCCH
Confidence 9999998521 22221 1 113567799999999999999999999667777766655432 35788
Q ss_pred HHHHHHHHHhcccCCCc-hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---
Q 018172 224 ESQLRAAKILGIVSDDY-PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED--- 299 (360)
Q Consensus 224 ~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 299 (360)
+.|.++.++++ .+.+ +.++++.+++++++++.+.+.|++. ++.+..+.+++ |+|++++..
T Consensus 314 ~~Q~a~~~~L~--d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~~~aG~-------------flwi~l~~~~~~ 377 (496)
T PLN02376 314 QTQLMLASMLS--DDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACLTSNAGL-------------FAWMDLRHLLRD 377 (496)
T ss_pred HHHHHHHHHhC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCceE-------------EEEEEchhhhcc
Confidence 99999999887 2333 4778888999999999999999987 45555566655 788887521
Q ss_pred --------HHHHHHHHhhCeeeeCCCCCCC-CCCeEEEEecC-ChHHHHHHHHHHHHHHhchh
Q 018172 300 --------EDCEKLLRAERIMARGGRRFGA-DAKYARVSMLS-REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 300 --------~~~~~~l~~~gI~~~pg~~f~~-~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~~ 352 (360)
+.+..++++.||.+.||+.|+. .++|+||+|+. +++.+++++++|.+++.+.+
T Consensus 378 ~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~ 440 (496)
T PLN02376 378 RNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFVSKNK 440 (496)
T ss_pred CCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHhh
Confidence 2334455567999999999975 57899999986 88999999999999997543
No 35
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=3e-41 Score=321.22 Aligned_cols=304 Identities=18% Similarity=0.318 Sum_probs=242.9
Q ss_pred cccccccCCCCccccccHHHHHHHHHHHhhc-C--CCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCC
Q 018172 22 DLMSYLSDMGNVCWFLVPELAEAINNLHHVV-D--NAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYS 98 (360)
Q Consensus 22 ~~~~~y~~~~g~~~~~~~~lr~~la~~~~~~-~--~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~ 98 (360)
+....|.+..|. ++||+++|+|++.+ + .++++ ++|++|+|+++++.+++.+++++||. |+++.|+|+
T Consensus 86 ~~~~~y~~~~G~-----~~LR~aiA~~l~~~~~~~~~v~p-~~Ivit~G~t~al~~l~~~l~~pGD~----Vlv~~P~Y~ 155 (447)
T PLN02607 86 RENALFQDYHGL-----KSFRQAMASFMEQIRGGKARFDP-DRIVLTAGATAANELLTFILADPGDA----LLVPTPYYP 155 (447)
T ss_pred chhhccCCCcch-----HHHHHHHHHHHHHhcCCCCCcCH-HHeEEcCChHHHHHHHHHHhCCCCCE----EEEcCCCCc
Confidence 345668898998 99999999998753 3 24555 58999999999999999999999998 999999999
Q ss_pred CcHHHHH-HhCCeeeeecCCc-ccccc---------------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcE
Q 018172 99 QYPAETD-YLRSGLYKWDGDA-NTFDK---------------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGK 157 (360)
Q Consensus 99 ~~~~~~~-~~g~~~~~~~~~~-~~~~~---------------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~ 157 (360)
.+...+. ..|+++++++.+. +++.. ..++|+|+++|||||||.++++ .+.++|++++++
T Consensus 156 ~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~ 235 (447)
T PLN02607 156 GFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIH 235 (447)
T ss_pred chHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCE
Confidence 9998887 4799999988763 23321 1378999999999999999993 455778889999
Q ss_pred EEEeecccCC-----CCCcCC---------CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCCh
Q 018172 158 LIHDLAYYWP-----QYTPIT---------GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSK 223 (360)
Q Consensus 158 li~D~ay~~~-----~~~~~~---------~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~ 223 (360)
+|+||+|.+. .+.++. +..+++++++||||.||++|+|+||+++.++++++.+.....+ .+.+.
T Consensus 236 lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~~--~~~s~ 313 (447)
T PLN02607 236 LVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--TLVSS 313 (447)
T ss_pred EEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHhhc--CCCCH
Confidence 9999999842 122221 1256899999999999999999999998677887877765432 35688
Q ss_pred HHHHHHHHHhcccCCCc-hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----
Q 018172 224 ESQLRAAKILGIVSDDY-PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---- 298 (360)
Q Consensus 224 ~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 298 (360)
++|.++..+|+. +.+ +.++++.+++++++++.+.+.|+++ ++.+..+.+++ |+|++++.
T Consensus 314 ~~q~~~~~~L~d--~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~~~~ag~-------------fvw~~L~~~~~~ 377 (447)
T PLN02607 314 QTQHLLASMLSD--EEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECLKGNAGL-------------FCWMNLSPLLET 377 (447)
T ss_pred HHHHHHHHHhCC--chhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcccCCeeE-------------EEEEEchHhhcC
Confidence 899999998872 232 3778899999999999999999987 45555565555 78888753
Q ss_pred ----h-HHH-HHHHHhhCeeeeCCCCCCC-CCCeEEEEecC-ChHHHHHHHHHHHHHHhchhc
Q 018172 299 ----D-EDC-EKLLRAERIMARGGRRFGA-DAKYARVSMLS-REEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 299 ----~-~~~-~~~l~~~gI~~~pg~~f~~-~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~~~ 353 (360)
. ..+ .++++++||.+.||..|+. .++|+|++|+. +++++++++++|.+++++.+.
T Consensus 378 ~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~~~~ 440 (447)
T PLN02607 378 PTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFMDRRKT 440 (447)
T ss_pred CCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHHHh
Confidence 1 233 3556668999999999975 58999999986 899999999999999977543
No 36
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-41 Score=320.47 Aligned_cols=294 Identities=17% Similarity=0.222 Sum_probs=239.7
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCC-CCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNA-VSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~-~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
..|++ .|. ++||++++++++. .|.. ++++++|++|+|+++++..++..++++||+ |+++.|+|+.+..
T Consensus 76 ~~Y~~-~G~-----~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~~~gd~----Vlv~~P~y~~~~~ 145 (410)
T PRK06290 76 RGYAD-NGI-----QEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFINPGDV----TLMTVPGYPVTGT 145 (410)
T ss_pred CCCCC-CCc-----HHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhCCCCCE----EEEeCCCCccHHH
Confidence 45764 777 9999999999865 4766 766557999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCCcc-cccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCC
Q 018172 103 ETDYLRSGLYKWDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQ 168 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~ 168 (360)
.++..|++++.++++.+ ++.. ..++++|++++||||||.++++ .+.++|++++++||+||+|.+..
T Consensus 146 ~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~ 225 (410)
T PRK06290 146 HTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALT 225 (410)
T ss_pred HHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhce
Confidence 99999999999998753 3322 2478999999999999999993 45567888999999999998532
Q ss_pred C----CcC---CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCch
Q 018172 169 Y----TPI---TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 169 ~----~~~---~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
+ .+. ....+++++++||||.||++|+|+||+++ ++++++.+...+.....+.+.+.|.++..+++ +.
T Consensus 226 ~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~-~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~---~~-- 299 (410)
T PRK06290 226 FDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVG-NELIVKAFATVKDNNDSGQFIAIQKAGIYALD---HP-- 299 (410)
T ss_pred eCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEe-CHHHHHHHHHHHhccccCCcHHHHHHHHHHhh---Cc--
Confidence 1 122 22346789999999999999999999998 89999999988877777788899999988887 33
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----------hHHH-HHHHHhhC
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----------DEDC-EKLLRAER 310 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~l~~~g 310 (360)
.++++.++.++++++.+.+.|+++ ++.+..|.|++ |+|+++++ ...+ ..++++.+
T Consensus 300 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~f-------------~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~ 365 (410)
T PRK06290 300 EITEKIREKYSRRLDKLVKILNEV-GFKAEMPGGTF-------------YLYVKAPKGTKSGIKFENAEEFSQYLIKEKL 365 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCeee-------------EEEEECCCccccCCCCCCHHHHHHHHHHhCC
Confidence 788999999999999999999998 45555566665 66777652 3344 44555557
Q ss_pred eeeeCCCCCCCCCCeEEEEecC---ChHHHHHHHHHHHHHHhch
Q 018172 311 IMARGGRRFGADAKYARVSMLS---REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 311 I~~~pg~~f~~~~~~~R~s~~~---~~e~~~~~~~~l~~~~~~~ 351 (360)
+.++||..|+ +++||+++. ++|+.++++++|++.+.+.
T Consensus 366 v~~~p~~~~~---~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 366 ISTVPWDDAG---HFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred EEEECCcccc---CeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 7888987664 599999974 7899999999999998763
No 37
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=9.9e-43 Score=310.07 Aligned_cols=313 Identities=15% Similarity=0.231 Sum_probs=253.7
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH
Q 018172 23 LMSYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP 101 (360)
Q Consensus 23 ~~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~ 101 (360)
..+.|+...|+ ++|+++|++.+.- .|....+.++|+||.|+.+++..++.+++++||+ |++.+|.|.+|.
T Consensus 61 ~~~qYt~~~G~-----p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDe----Vii~eP~fd~Y~ 131 (420)
T KOG0257|consen 61 STNQYTRGYGL-----PQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDE----VIVFEPFFDCYI 131 (420)
T ss_pred hhccccccCCc-----hHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCE----EEEecCcchhhh
Confidence 35779988888 9999999997654 6777888889999999999999999999999999 999999999999
Q ss_pred HHHHHhCCeeeeecCC-------cccc-------cc--CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEe
Q 018172 102 AETDYLRSGLYKWDGD-------ANTF-------DK--NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHD 161 (360)
Q Consensus 102 ~~~~~~g~~~~~~~~~-------~~~~-------~~--~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D 161 (360)
....+.|..++.+++. .+.+ +. +++||+|++|+||||||.++++ .+.++|++||+++|+|
T Consensus 132 ~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisD 211 (420)
T KOG0257|consen 132 PQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISD 211 (420)
T ss_pred hHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEh
Confidence 9999999999887755 1111 11 4799999999999999999994 4567899999999999
Q ss_pred ecccC----C----CCCcCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHh
Q 018172 162 LAYYW----P----QYTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKIL 233 (360)
Q Consensus 162 ~ay~~----~----~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l 233 (360)
|+|.. + .+.++++.+++++.++|++|+||++|||+||+++ ++.+...+...+....+..+++.|.|.++++
T Consensus 212 evYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~ig-p~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~ 290 (420)
T KOG0257|consen 212 EVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIG-PKHLYSALFPVHQNFVFTCPTPIQEASAAAF 290 (420)
T ss_pred hHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeec-hHHhhhhHHHHhhccccccCcHHHHHHHHHH
Confidence 99983 2 2455678999999999999999999999999999 9999999999998888999999999999988
Q ss_pred cccCC--Cc--hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCc-ccc-cCCch-HHHHHHH
Q 018172 234 GIVSD--DY--PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGF-AWL-ESKED-EDCEKLL 306 (360)
Q Consensus 234 ~~~~~--~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~-~~~~~~l 306 (360)
..-.. +. ..++.++.+.|+++|+.+.+.|.++ ++.+..|+|++|.+.+........+ --+ +-+++ ..+.-++
T Consensus 291 ~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~ 369 (420)
T KOG0257|consen 291 ALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLI 369 (420)
T ss_pred hhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhh
Confidence 74321 11 1455559999999999999999999 7888889888844432220000000 000 00112 5567899
Q ss_pred HhhCeeeeCCCCCCCC------CCeEEEEecCChHHHHHHHHHHHH
Q 018172 307 RAERIMARGGRRFGAD------AKYARVSMLSREEIFNIFLERLSA 346 (360)
Q Consensus 307 ~~~gI~~~pg~~f~~~------~~~~R~s~~~~~e~~~~~~~~l~~ 346 (360)
++.|+.+.|++.|+.. .+++|+++..++|.++.+.+++++
T Consensus 370 ~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~~ 415 (420)
T KOG0257|consen 370 KEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLKK 415 (420)
T ss_pred ccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHhh
Confidence 9999999999999752 457899998899999999998883
No 38
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-41 Score=319.09 Aligned_cols=298 Identities=19% Similarity=0.210 Sum_probs=248.3
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
.+|+++.|. ++||+++++++..+ |..+.+ ++|++|+|++++++.++..++++||+ |++++|+|..|...
T Consensus 64 ~~Y~~~~G~-----~~lr~~ia~~l~~~~g~~~~~-~~i~~t~G~~~al~~~~~~~~~~gd~----vl~~~p~y~~y~~~ 133 (402)
T PRK06107 64 TKYTLVNGT-----PALRKAIIAKLERRNGLHYAD-NEITVGGGAKQAIFLALMATLEAGDE----VIIPAPYWVSYPDM 133 (402)
T ss_pred CCCCCCCCC-----HHHHHHHHHHHHHhcCCCCCh-hhEEEeCCHHHHHHHHHHHhcCCCCE----EEEecCCCcCHHHH
Confidence 469999998 99999999998644 776666 48999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCc-ccccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhc-CcEEEEeecccCCC
Q 018172 104 TDYLRSGLYKWDGDA-NTFDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSA-EGKLIHDLAYYWPQ 168 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~-~~~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~-~~~li~D~ay~~~~ 168 (360)
+...+.+++.++.+. +++.. .++++++++++||||||.+++. .+.++|+++ ++++|+||+|.+..
T Consensus 134 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~ 213 (402)
T PRK06107 134 VLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIR 213 (402)
T ss_pred HHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccc
Confidence 998898888877653 33322 3578999999999999999983 445677777 99999999997421
Q ss_pred -----CCcCC----CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCC
Q 018172 169 -----YTPIT----GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDD 239 (360)
Q Consensus 169 -----~~~~~----~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (360)
.+++. +..+++++++||||.|++||+|+||+++ ++++++.+.......+.+++.+.|.++..++.. +
T Consensus 214 ~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~-~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~- 289 (402)
T PRK06107 214 FDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAG-PADLIAAINKLQSQSSSCPSSISQAAAAAALNG--D- 289 (402)
T ss_pred cCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeec-CHHHHHHHHHHHHhcccCCChHHHHHHHHHhcC--C-
Confidence 12221 2346899999999999999999999998 899999999988877889999999999998862 3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC--------------ch-HHHHH
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--------------ED-EDCEK 304 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~-~~~~~ 304 (360)
..++++.++.++++++.+.+.|++++++.+..|.+++ |+|++++ +. +.+..
T Consensus 290 -~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (402)
T PRK06107 290 -QSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAF-------------YLYVNCAGLIGKTTPEGKVLETDQDVVLY 355 (402)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcce-------------EEeeecccccccccccccCCCCHHHHHHH
Confidence 3789999999999999999999988677776777776 5666541 22 45667
Q ss_pred HHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 305 LLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 305 ~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
+++++||.++||..|+. ++++||+++.++|++++++++|.+++++-
T Consensus 356 l~~~~gv~v~pg~~Fg~-~~~iRis~~~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 356 LLDSAGVAVVQGTAYGL-SPYFRLSIATSLETLEEACARIERAVAAL 401 (402)
T ss_pred HHHhCCEEEeCccccCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 88889999999999985 67999999889999999999999988653
No 39
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=1.8e-41 Score=329.88 Aligned_cols=301 Identities=18% Similarity=0.228 Sum_probs=238.3
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCC-CCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNA-VSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~-~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|+++.|. ++||+++++++..++.. +++ ++|++|+|+++++++++.+++++||+ |++++|+|+.|...
T Consensus 179 ~~Y~~~~G~-----~~lReaia~~~~~~~~~~~~~-~~I~it~G~~eal~~~~~~l~~~Gd~----Vli~~P~y~~y~~~ 248 (517)
T PRK13355 179 EGYSDSKGL-----FSARKAIMQYAQLKGLPNVDV-DDIYTGNGVSELINLSMSALLDDGDE----VLIPSPDYPLWTAC 248 (517)
T ss_pred CCCCCCcCh-----HHHHHHHHHHHHhcCCCCCCh-hHEEEeCcHHHHHHHHHHHhCCCCCE----EEEcCCCCcCHHHH
Confidence 469999998 99999999998776653 555 58999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcc-cccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCCC
Q 018172 104 TDYLRSGLYKWDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQY 169 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~~ 169 (360)
++..|++++.++.+.+ ++.. ++++++|+++|||||||.++++ .+.++|++++++||+||+|.+..+
T Consensus 249 ~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~ 328 (517)
T PRK13355 249 VNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVM 328 (517)
T ss_pred HHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcC
Confidence 9999999998887643 2322 3689999999999999999993 455678889999999999984322
Q ss_pred -----CcCCCC--CCccEEEeccccccCCCCceEEEEeec-CHH----HHHHHHHHHhhccccCChHHHHHHHHHhcccC
Q 018172 170 -----TPITGA--ADHDIMLFTLSKCTGHAGSRIGWALVK-DTE----VARKMTRFIELGSIGVSKESQLRAAKILGIVS 237 (360)
Q Consensus 170 -----~~~~~~--~~~~i~~~S~sK~~~~~G~r~G~~~~~-~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 237 (360)
.++... ...+++++||||+|+++|+|+||++++ +.+ +++.+.... ....+.+.++|.++.++|...
T Consensus 329 ~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~aL~~~- 406 (517)
T PRK13355 329 DGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNMLA-NMRLCSNVPAQSIVQTALGGH- 406 (517)
T ss_pred CCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHHh-cCcCCcChHHHHHHHHHhcCC-
Confidence 222221 224677899999999999999999962 344 344443332 234678899999999988631
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-------ch-HHHHHHHHhh
Q 018172 238 DDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-------ED-EDCEKLLRAE 309 (360)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~l~~~ 309 (360)
..+..++.+.++ +.++|+++.+.|++++++.+..|.|++ |+|++++ +. +++.++|.++
T Consensus 407 ~~~~~~~~~~~~-~~~~r~~l~~~L~~~~g~~~~~p~g~f-------------y~~~~l~~~~~~~~~~~~~~~~ll~~~ 472 (517)
T PRK13355 407 QSVKDYLVPGGR-VYEQRELVYNALNAIPGISAVKPKAAF-------------YIFPKIDVKKFNIHDDEQFALDLLHDK 472 (517)
T ss_pred ccHHHHHHHHHH-HHHHHHHHHHHHhcCCCcccCCCCeee-------------EEEeecCcccCCCCCHHHHHHHHHHhC
Confidence 123466666544 456689999999998778888888877 5565553 23 6778899999
Q ss_pred CeeeeCCCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 310 RIMARGGRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 310 gI~~~pg~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
||.++||..|+. .++|+|++++.+++++++++++|.+++.+.
T Consensus 473 gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~a~~rl~~~~~~~ 515 (517)
T PRK13355 473 KVLIVQGTGFNWDKPDHFRVVYLPRLEDLEDAMDRLADFFSYY 515 (517)
T ss_pred CEEEeCcchhCCCCcCEEEEEeCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999974 578999999779999999999999999754
No 40
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-41 Score=318.00 Aligned_cols=298 Identities=19% Similarity=0.240 Sum_probs=246.0
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|+++.|. ++||++++++++.. |..+++ ++|++|+|+++++..++..++++||+ |++++|+|+.+...
T Consensus 55 ~~Y~~~~G~-----~~lr~~la~~~~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~----vl~~~p~y~~~~~~ 124 (382)
T PRK06108 55 TFYTHNLGI-----PELREALARYVSRLHGVATPP-ERIAVTSSGVQALMLAAQALVGPGDE----VVAVTPLWPNLVAA 124 (382)
T ss_pred CCCCCCCCC-----HHHHHHHHHHHHHHhCCCcCc-ceEEEeCChHHHHHHHHHHhcCCCCE----EEEeCCCccchHHH
Confidence 358888888 99999999997643 666665 48999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcc--cccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC
Q 018172 104 TDYLRSGLYKWDGDAN--TFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ 168 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~--~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~ 168 (360)
++..|++++.++.+.+ ++.. +++++++++++||||||.+++ +.+.++|+++++++|+||+|.+..
T Consensus 125 ~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~ 204 (382)
T PRK06108 125 PKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLY 204 (382)
T ss_pred HHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhc
Confidence 9999999999987642 2211 357899999999999999998 345677888999999999998532
Q ss_pred CC------c---CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCC
Q 018172 169 YT------P---ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDD 239 (360)
Q Consensus 169 ~~------~---~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (360)
+. + +....++++++.||||.||++|+|+||+++ ++++++.+.+.......+.+.+.|.++..++.. .
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~--~- 280 (382)
T PRK06108 205 YAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVA-PPALGQVLEKLIEYNTSCVAQFVQRAAVAALDE--G- 280 (382)
T ss_pred cCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeC-CHHHHHHHHHHHHhcccCCChHHHHHHHHHHhC--C-
Confidence 21 1 112346899999999999999999999999 899999998877666677899999999998873 2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---h-HHHHHHHHhhCeeeeC
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---D-EDCEKLLRAERIMARG 315 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~l~~~gI~~~p 315 (360)
..++++.+++++++++.+.+.|++++++.+..|.+++ |+|+++++ . +.+..+++++||.++|
T Consensus 281 -~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~-------------~~~~~l~~~~~~~~~~~~ll~~~gV~v~p 346 (382)
T PRK06108 281 -EDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAM-------------YAFFRIPGVTDSLALAKRLVDEAGLGLAP 346 (382)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeE-------------EEEEeCCCCCCHHHHHHHHHHhCCEEEeC
Confidence 3788999999999999999999988666666665554 77888764 2 4445556778999999
Q ss_pred CCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 316 GRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 316 g~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
|..|+. .++++|+|++.+++++++++++|++++++
T Consensus 347 g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~ 382 (382)
T PRK06108 347 GTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLAR 382 (382)
T ss_pred chhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhC
Confidence 998864 46899999988999999999999998754
No 41
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=3.2e-41 Score=318.07 Aligned_cols=297 Identities=19% Similarity=0.216 Sum_probs=242.4
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. ++||++++++++. +|..+++ ++|++|+|++++++.++..++++||+ |++++|+|+.+...
T Consensus 61 ~~Y~~~~g~-----~~lr~~ia~~~~~~~~~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~----Vlv~~p~y~~~~~~ 130 (388)
T PRK07337 61 TQYTSALGL-----APLREAIAAWYARRFGLDVAP-ERIVVTAGASAALLLACLALVERGDE----VLMPDPSYPCNRHF 130 (388)
T ss_pred CCCCCCCCC-----HHHHHHHHHHHHHHhCCCCCh-HhEEEecCcHHHHHHHHHHhcCCCCE----EEEeCCCchhhHHH
Confidence 458888887 9999999999864 4666666 48999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcc-cccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC
Q 018172 104 TDYLRSGLYKWDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY 169 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~ 169 (360)
++..|++++.++++.+ ++.. ++++++|++++||||||.+++ +.+.++|+++++++|+||+|.+..+
T Consensus 131 ~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~ 210 (388)
T PRK07337 131 VAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSY 210 (388)
T ss_pred HHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEecccccccc
Confidence 9999999999987642 2222 358899999999999999998 3455778889999999999985322
Q ss_pred ----CcCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHH
Q 018172 170 ----TPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFE 245 (360)
Q Consensus 170 ----~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 245 (360)
.+.....+++++++||||.|+++|+|+||+++ ++++++.+.........+.+.+.|.++..++.. .. ..++.
T Consensus 211 ~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~-~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~--~~-~~~~~ 286 (388)
T PRK07337 211 DAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVV-PEALVGTFEKLAQNLFICASALAQHAALACFEP--DT-LAIYE 286 (388)
T ss_pred CCCCcChhhccCCEEEEEechhhcCCchhheeeeec-CHHHHHHHHHHHHHhccCCChHHHHHHHHHhcc--Cc-hHHHH
Confidence 22223456788999999999999999999999 889999998887767778899999999888762 22 24568
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--------h-HHHHHHHHhhCeeeeCC
Q 018172 246 YGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--------D-EDCEKLLRAERIMARGG 316 (360)
Q Consensus 246 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~l~~~gI~~~pg 316 (360)
+.++.++++++.+.+.|++++......|.+++ |+|+++++ . +.+..+++++||.+.||
T Consensus 287 ~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~-------------f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg 353 (388)
T PRK07337 287 RRRAEFKRRRDFIVPALESLGFKVPVMPDGAF-------------YVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPG 353 (388)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCCCeeE-------------EEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCc
Confidence 88999999999999999987432223455554 88888752 2 44556788899999999
Q ss_pred CCCCC--CCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 317 RRFGA--DAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 317 ~~f~~--~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
..|+. .++|+|++++.+++.+++++++|.+++
T Consensus 354 ~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 354 RDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLF 387 (388)
T ss_pred hhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 99974 367999999888999999999998875
No 42
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=2.9e-41 Score=315.73 Aligned_cols=289 Identities=21% Similarity=0.265 Sum_probs=239.3
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhc-CCC-CCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVV-DNA-VSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYP 101 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~-~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~ 101 (360)
..|+++.|. ++||+++++++..+ |.+ +++ ++|++|+|+++++..++..+ +++||+ |++++|+|+.+.
T Consensus 56 ~~Y~~~~G~-----~~lr~~ia~~l~~~~~~~~~~~-~~I~it~G~~~~i~~~~~~l~~~~gd~----Vl~~~p~y~~~~ 125 (364)
T PRK07865 56 PGYPTTAGT-----PELREAIVGWLARRRGVTGLDP-AAVLPVIGSKELVAWLPTLLGLGPGDV----VVIPELAYPTYE 125 (364)
T ss_pred CCCCCccCC-----HHHHHHHHHHHHHHcCCCCCCc-ccEEEccChHHHHHHHHHHHcCCCCCE----EEECCCCcccHH
Confidence 369988888 99999999998654 665 666 48999999999999988888 789998 999999999999
Q ss_pred HHHHHhCCeeeeecCCccccccCCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCCC----CcCC
Q 018172 102 AETDYLRSGLYKWDGDANTFDKNNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQY----TPIT 173 (360)
Q Consensus 102 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~~----~~~~ 173 (360)
..++..|++++.++. .+.+.. .++++|++++||||||.+++. .+.++|+++++++|+||+|.+..+ .+..
T Consensus 126 ~~~~~~g~~~~~~~~-~~~l~~-~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~ 203 (364)
T PRK07865 126 VGARLAGATVVRADS-LTELGP-QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSIL 203 (364)
T ss_pred HHHHhcCCEEEecCC-hhhCCc-ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccc
Confidence 999999999998863 233333 578999999999999999983 455677889999999999985221 1111
Q ss_pred ------CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHH
Q 018172 174 ------GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYG 247 (360)
Q Consensus 174 ------~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (360)
...+++++++||||+|+++|+|+||+++ ++++++.+...+.....+.+.+.|.++.+++. + ..++++.
T Consensus 204 ~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~--~~~~~~~ 277 (364)
T PRK07865 204 DPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAG-DPALVAELLEVRKHAGMMVPAPVQAAMVAALG---D--DAHVREQ 277 (364)
T ss_pred cccccCCccceEEEEeechhccCCCceeeEEEec-CHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhC---C--HHHHHHH
Confidence 1346799999999999999999999998 89999999888776777889999999988886 3 2788999
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCCCC-CCCe
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRFGA-DAKY 325 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~~-~~~~ 325 (360)
++.++++++.+.+.|+++ ++.+..+.+++ |+|+.++.. ..+.+.|.++||.++||..|+. .+++
T Consensus 278 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~ 343 (364)
T PRK07865 278 RERYARRRAVLRPALEAA-GFRVDHSEAGL-------------YLWATRGEDCWDTVAWLAERGILVAPGDFYGPAGAQH 343 (364)
T ss_pred HHHHHHHHHHHHHHHHHc-CCcccCCCccE-------------EEEEeCCCCHHHHHHHHHHCCEEEeCccccCcCCCCE
Confidence 999999999999999987 45555555554 678877543 5667888899999999998875 4689
Q ss_pred EEEEecCChHHHHHHHHHHH
Q 018172 326 ARVSMLSREEIFNIFLERLS 345 (360)
Q Consensus 326 ~R~s~~~~~e~~~~~~~~l~ 345 (360)
+||+++.++|++++++++|+
T Consensus 344 iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 344 VRVALTATDERIAAAVERLA 363 (364)
T ss_pred EEEEecCCHHHHHHHHHHhh
Confidence 99999888999999999885
No 43
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=3.7e-41 Score=317.63 Aligned_cols=299 Identities=20% Similarity=0.254 Sum_probs=244.4
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|+++.|. ++||++++++++. ++..++++++|++|+|+++++++++..++++||+ |++++|+|..+..+
T Consensus 61 ~~Y~~~~g~-----~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~----vl~~~p~y~~~~~~ 131 (391)
T PRK07309 61 SHYTGMAGL-----LELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDK----VLLPAPAYPGYEPI 131 (391)
T ss_pred CCCCCCCCc-----HHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCE----EEEeCCCCcchHHH
Confidence 458888887 9999999999864 5777776678999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcccccc------------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCC
Q 018172 104 TDYLRSGLYKWDGDANTFDK------------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWP 167 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~~~~------------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~ 167 (360)
++..|.+++.++.+.+++.. .++++++++++||||||.+++ +.+.++|+++++++|+|++|.+.
T Consensus 132 ~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~ 211 (391)
T PRK07309 132 VNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSEL 211 (391)
T ss_pred HHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccce
Confidence 99999999998876443321 136899999999999999998 34567788899999999999853
Q ss_pred CC-----CcCC-CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCch
Q 018172 168 QY-----TPIT-GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 168 ~~-----~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
.+ .++. ...++++++.||||+||++|+|+||+++ ++++++.+.........+++.+.|.++..+++. ..
T Consensus 212 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~-- 286 (391)
T PRK07309 212 TYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFA-PAEFTAQLIKSHQYLVTAATTMAQFAAVEALTN--GK-- 286 (391)
T ss_pred eeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEe-CHHHHHHHHHHHhhcccCCChHHHHHHHHHHhC--Ch--
Confidence 22 1222 2357899999999999999999999999 899999998776655668899999999998873 21
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-----h-HHHHHHHHhhCeeeeC
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-----D-EDCEKLLRAERIMARG 315 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~l~~~gI~~~p 315 (360)
.+....++.++++++.+.+.|+++ ++.+..|.+++ |+|++++. . +.+.++++++||.+.|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~p~gg~-------------~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~p 352 (391)
T PRK07309 287 DDALPMKKEYIKRRDYIIEKMTDL-GFKIIKPDGAF-------------YIFAKIPAGYNQDSFKFLQDFARKKAVAFIP 352 (391)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeE-------------EEEEECCCCCCCCHHHHHHHHHHhCCEEEeC
Confidence 345677889999999999999988 45666666655 67777653 2 3344567788999999
Q ss_pred CCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 316 GRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 316 g~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
|..|+. .++++|++++.+.+++++++++|++++++.
T Consensus 353 g~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 353 GAAFGPYGEGYVRLSYAASMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred chhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 999965 468999999888899999999999998664
No 44
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=2.9e-41 Score=318.93 Aligned_cols=300 Identities=19% Similarity=0.236 Sum_probs=248.0
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|+++.|. ++||++++++++. +|..++++++|++|+|++++++.++..++++||+ |++++|+|+.+..
T Consensus 60 ~~~Y~~~~G~-----~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~----Vlv~~P~y~~~~~ 130 (395)
T PRK08175 60 THGYSTSRGI-----PRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDT----VLVPNPSYPIHIY 130 (395)
T ss_pred cCCCCCCCCC-----HHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCE----EEEcCCCCcchHH
Confidence 3569999998 9999999999864 4777776657999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCCcccc-----cc-----CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCC
Q 018172 103 ETDYLRSGLYKWDGDANTF-----DK-----NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQ 168 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~~~~-----~~-----~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~ 168 (360)
.++..|++++.++.+.++. +. .++++++++++||||||.+++. .+.++|+++|+++|+||+|.+..
T Consensus 131 ~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~ 210 (395)
T PRK08175 131 GAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIV 210 (395)
T ss_pred HHHHcCCeEEEEecccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhc
Confidence 9999999999998875432 11 1478999999999999999993 56678888999999999997422
Q ss_pred -----CCcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCc
Q 018172 169 -----YTPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 169 -----~~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
.+++. ...+++++++||||.||+||+|+||+++ ++++++.+.+.+.....+.+.+.|.++..++.. .
T Consensus 211 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~-- 285 (395)
T PRK08175 211 YDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG-NPELVSALARIKSYHDYGTFTPLQVAAIAALEG--D-- 285 (395)
T ss_pred cCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeC-CHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC--c--
Confidence 12222 2246788999999999999999999998 899999999888777788888999988888863 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc------hHHH-HHHHHhhCeee
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE------DEDC-EKLLRAERIMA 313 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~l~~~gI~~ 313 (360)
+.++++.++.++++++++.+.|+.++ +.+..|.+++ |+|+++++ ..++ .++++++||.+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~p~~g~-------------~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v 351 (395)
T PRK08175 286 QQCVRDIAEQYKRRRDVLVKGLHEAG-WMVEMPKASM-------------YVWAKIPEPYAAMGSLEFAKKLLNEAKVCV 351 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC-CcccCCCEEE-------------EEEEECCcccCCCCHHHHHHHHHHhCCEEE
Confidence 37899999999999999999999984 5555555554 78888864 2344 45666889999
Q ss_pred eCCCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 314 RGGRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 314 ~pg~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
.||..|+. .++++||+++.+++.+++++++|.+++.+.
T Consensus 352 ~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l~~~ 390 (395)
T PRK08175 352 SPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRAD 390 (395)
T ss_pred eCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 99999965 457999999778999999999999999754
No 45
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=3e-41 Score=319.54 Aligned_cols=298 Identities=15% Similarity=0.188 Sum_probs=239.5
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|.+..|. ++||++++++++..+..+++ ++|++|+|+++++.+++..++++||+ |+++.|+|..+..++
T Consensus 67 ~~Y~~~~g~-----~~lr~aia~~~~~~~~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~----v~i~~P~y~~~~~~~ 136 (401)
T TIGR01264 67 NGYAPTVGA-----LSAREAIASYYHNPDGPIEA-DDVVLCSGCSHAIEMCIAALANAGQN----ILVPRPGFPLYETLA 136 (401)
T ss_pred CCCCCCCCC-----HHHHHHHHHHHhhcCCCCCH-HHEEECcChHHHHHHHHHHhCCCCCE----EEEeCCCChhHHHHH
Confidence 458888887 99999999999877776655 58999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecCCcc---cccc-------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC--
Q 018172 105 DYLRSGLYKWDGDAN---TFDK-------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ-- 168 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~---~~~~-------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~-- 168 (360)
+..|++++.++++.+ +++. +.+++++++++||||||.+++ +.+.++|+++++++|+||+|.+..
T Consensus 137 ~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~ 216 (401)
T TIGR01264 137 ESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFS 216 (401)
T ss_pred HHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccC
Confidence 999999998876532 2221 256899999999999999998 245577788999999999998532
Q ss_pred ---CCcCCC--CCCccEEEeccccccCCCCceEEEEeecCH-----HHHHHHHHHHhhccccCChHHHHHHHHHhcccCC
Q 018172 169 ---YTPITG--AADHDIMLFTLSKCTGHAGSRIGWALVKDT-----EVARKMTRFIELGSIGVSKESQLRAAKILGIVSD 238 (360)
Q Consensus 169 ---~~~~~~--~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 238 (360)
..++.. ...++++++||||+|+++|+|+||++++++ ++++.+..... ...+.+.+.|.++.+++..
T Consensus 217 ~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~--- 292 (401)
T TIGR01264 217 GATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLR--- 292 (401)
T ss_pred CcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHh---
Confidence 222222 223589999999999999999999998432 35555555433 3467789999999998863
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC--------ch-HHHHHHHHhh
Q 018172 239 DYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--------ED-EDCEKLLRAE 309 (360)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~l~~~ 309 (360)
..+.++++.++.++++++.+.+.|+.++++.+..|.+++ |+|++++ +. +.+..+++++
T Consensus 293 ~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~-------------f~~~~~~~~~~~~~~~~~~~~~~l~~~~ 359 (401)
T TIGR01264 293 TPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAM-------------YMMVGIEMEHFPEFKNDVEFTERLVAEQ 359 (401)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeee-------------EEEEEecccccCCCCCHHHHHHHHHHhC
Confidence 224899999999999999999999988655555565555 7888753 22 4455556789
Q ss_pred CeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 310 RIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 310 gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
||.++||..|+. ++++|++++.+++++++++++|.+++++
T Consensus 360 gI~v~pg~~f~~-~~~iRis~~~~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 360 SVFCLPGSCFEY-PGFFRVVLTVPVVMMEEACSRIQEFCER 399 (401)
T ss_pred CEEEeCchhcCC-CCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 999999999974 7899999988899999999999999865
No 46
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-41 Score=295.35 Aligned_cols=310 Identities=18% Similarity=0.253 Sum_probs=257.6
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH
Q 018172 23 LMSYLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP 101 (360)
Q Consensus 23 ~~~~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~ 101 (360)
..+.|++..|. ...|+++|+|+. ......+++ +|++|+|.+|++.+++.+|.+||.. |++|.|+|+.|.
T Consensus 95 k~N~Yaps~G~-----~~AR~AVAeYl~~~l~~kl~a~-DV~ltsGC~qAIe~~i~~LA~p~aN----ILlPrPGfp~Y~ 164 (447)
T KOG0259|consen 95 KGNGYAPSVGI-----LPARRAVAEYLNRDLPNKLTAD-DVVLTSGCSQAIELAISSLANPGAN----ILLPRPGFPLYD 164 (447)
T ss_pred CCCCcCCcccc-----HHHHHHHHHHhhcCCCCccCcC-ceEEeccchHHHHHHHHHhcCCCCc----eecCCCCCchHH
Confidence 34779999998 999999999954 445566654 7999999999999999999999999 999999999999
Q ss_pred HHHHHhCCeeeeecCC--------cccccc--CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCC
Q 018172 102 AETDYLRSGLYKWDGD--------ANTFDK--NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWP 167 (360)
Q Consensus 102 ~~~~~~g~~~~~~~~~--------~~~~~~--~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~ 167 (360)
.-+.-.|.+++.+++- .++++. |++|.+++++|||||+|.+++ ++++++|+++++.+|.||+|...
T Consensus 165 ~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~ 244 (447)
T KOG0259|consen 165 TRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHT 244 (447)
T ss_pred HhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhccee
Confidence 9999999999976643 333332 789999999999999999999 36778888899999999999842
Q ss_pred -----CCCcCC--CCCCccEEEeccccccCCCCceEEEEeecC-------HHHHHHHHHHHhhccccCChHHHHHHHHHh
Q 018172 168 -----QYTPIT--GAADHDIMLFTLSKCTGHAGSRIGWALVKD-------TEVARKMTRFIELGSIGVSKESQLRAAKIL 233 (360)
Q Consensus 168 -----~~~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l 233 (360)
.+.++. ...--++.++|.||-|-.||||+||++..| ...++.+.++.. ...+++++.|.|+...|
T Consensus 245 vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~-~~~~p~TiiQ~AlP~IL 323 (447)
T KOG0259|consen 245 VFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLD-IIPGPATIIQGALPDIL 323 (447)
T ss_pred ecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHHHHHHHHHHh-ccCCccHhHHHHhHHHH
Confidence 233332 344457889999999999999999999864 355677777765 56789999999999988
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCe
Q 018172 234 GIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFG-LPEYPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERI 311 (360)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI 311 (360)
+ +...+++++..+.++.+.+..++.|+.++++. ..+|+|++|.+... .. -.+.++.++ +++.++.+++.+
T Consensus 324 ~---kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l---~~--s~~~~~~dD~dFc~kL~~Eesv 395 (447)
T KOG0259|consen 324 E---KTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKL---NL--SLFPDIEDDVDFCQKLAREESV 395 (447)
T ss_pred H---hChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEecc---ch--hhhccccccHHHHHHHhhhcce
Confidence 7 33359999999999999999999999999888 67888888543211 00 022333445 899999999999
Q ss_pred eeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 312 MARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 312 ~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
.+.||..|+. ++|+|++++.+.+.++++.++|++++.|..
T Consensus 396 ~~LPG~af~~-~nw~Ri~i~~~~~~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 396 ICLPGQAFGL-KNWLRIVITVEEEMLEEAFSRIKEFCDRHS 435 (447)
T ss_pred EEeccccccC-CCeEEEEEccChHHHHHHHHHHHHHHHhhh
Confidence 9999999997 889999998899999999999999999875
No 47
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-41 Score=318.78 Aligned_cols=300 Identities=20% Similarity=0.271 Sum_probs=246.3
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|.+..|. ++||++++++++.. |..+++ ++|++|+|+++++.+++..++++||+ |++++|+|..+...
T Consensus 64 ~~Y~~~~g~-----~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~g~~----Vlv~~p~y~~~~~~ 133 (391)
T PRK08361 64 THYTPNAGI-----PELREAIAEYYKKFYGVDVDV-DNVIVTAGAYEATYLAFESLLEEGDE----VIIPDPAFVCYVED 133 (391)
T ss_pred CCCCCCCCc-----HHHHHHHHHHHHHHhCCCCCc-ccEEEeCChHHHHHHHHHHhcCCCCE----EEEcCCCCcccHHH
Confidence 458777887 99999999997643 666666 48999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCccc---ccc-------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC
Q 018172 104 TDYLRSGLYKWDGDANT---FDK-------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY 169 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~---~~~-------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~ 169 (360)
++..|++++.++.+.++ ++. +++++++++++||||||.+++ +.+.++|+++++++|+||+|.+..+
T Consensus 134 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~ 213 (391)
T PRK08361 134 AKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLY 213 (391)
T ss_pred HHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEccccccee
Confidence 99999999999887542 221 357899999999999999998 3456678889999999999985321
Q ss_pred -----CcCC-CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 170 -----TPIT-GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 170 -----~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
.+.. ...+++++++||||.||++|+|+||+++ ++++++.+.+.......+.+.+.|.++..+++. ..+..+
T Consensus 214 ~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~ 290 (391)
T PRK08361 214 EGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIA-PEQVIKDMIKLHAYIIGNVASFVQIAGIEALRS--KESWKA 290 (391)
T ss_pred CCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhcc-CHHHHHHHHHHHhhhccCCChHHHHHHHHHhcC--CcccHH
Confidence 1222 2346899999999999999999999999 889999988877666678899999999998873 333368
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHH-HHHHhhCeeeeCCCC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCE-KLLRAERIMARGGRR 318 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~l~~~gI~~~pg~~ 318 (360)
+++.++.++++++.+.+.|++++++.+..|.+++ |+|++++. ...+. .+++++||.+.||..
T Consensus 291 ~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~-------------~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~ 357 (391)
T PRK08361 291 VEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAF-------------YVFANIDETGMSSEDFAEWLLEKARVVVIPGTA 357 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEE-------------EEEEECCCCCCCHHHHHHHHHHhCCEEEcCchh
Confidence 9999999999999999999998666666666665 67877753 24444 445568999999999
Q ss_pred CCC-CCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 319 FGA-DAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 319 f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
|+. .++++|++++.+++++++++++|++++++
T Consensus 358 f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 358 FGKAGEGYIRISYATSKEKLIEAMERMEKALEE 390 (391)
T ss_pred hCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 975 46899999988889999999999998864
No 48
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-40 Score=314.39 Aligned_cols=299 Identities=22% Similarity=0.294 Sum_probs=243.4
Q ss_pred ccccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. +++|+++++++. ..|..++++++|++|+|+++++..++..++++||+ |++++|+|..+...
T Consensus 59 ~~Y~~~~G~-----~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~----Vlv~~P~y~~~~~~ 129 (389)
T PRK05957 59 HKYQAVQGI-----PPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDE----IILNTPYYFNHEMA 129 (389)
T ss_pred CCCCCCCCC-----HHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCE----EEEeCCCCcCHHHH
Confidence 468888888 999999999875 44766665668999999999999999999999998 99999999999998
Q ss_pred HHHhCCeeeeecCCcc-cccc-------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCCC-
Q 018172 104 TDYLRSGLYKWDGDAN-TFDK-------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQYT- 170 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~~~-------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~~- 170 (360)
++..|++++.++.+.+ +++. ++++++|++++||||||.+++ +.+.++|+++|+++|+||+|.+..+.
T Consensus 130 ~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~ 209 (389)
T PRK05957 130 ITMAGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDG 209 (389)
T ss_pred HHhcCCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCC
Confidence 9999999999887633 2222 357999999999999999998 24567788899999999999842211
Q ss_pred ----c---CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 171 ----P---ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 171 ----~---~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
+ +.+...++++++||||.||++|+|+||+++ ++++++.+.........+.+.+.|.++..+++. .. .+
T Consensus 210 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~--~~ 284 (389)
T PRK05957 210 VKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVI-PIHLLEAIKKIQDTILICPPVVSQYAALGALQV--GK--SY 284 (389)
T ss_pred CCccChhhCCCccCcEEEEecchhhccCccceeEEEec-CHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC--Ch--HH
Confidence 1 124456899999999999999999999998 899999999888767778888999999888862 22 67
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCc-ccCCCCCcccccccccCCCCCCcccccCCch----HHHHHHHHhhCeeeeCCCC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVF-GLPEYPLEYCNFTGKFTNSHPGFAWLESKED----EDCEKLLRAERIMARGGRR 318 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~gI~~~pg~~ 318 (360)
+++.++.++++++.+.+.|+++++. .+..+.+++ |+|++++.. +.+..+++++||.++||+.
T Consensus 285 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~-------------~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~ 351 (389)
T PRK05957 285 CQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAF-------------YCFLKVNTDLNDFELVKQLIREYRVAVIPGTT 351 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeE-------------EEEEeCCCCCChHHHHHHHHHHCCEEEccchh
Confidence 8888899999999999999988653 444555554 778877532 4445555678999999999
Q ss_pred CCCC-CCeEEEEecC-ChHHHHHHHHHHHHHHhc
Q 018172 319 FGAD-AKYARVSMLS-REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 319 f~~~-~~~~R~s~~~-~~e~~~~~~~~l~~~~~~ 350 (360)
|+.. ++++|+|++. +++++++++++|.+.++.
T Consensus 352 f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 352 FGMKNGCYLRIAYGALQKATAKEGIERLVQGLKT 385 (389)
T ss_pred hCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 9753 5699999976 889999999999988764
No 49
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=3.4e-41 Score=317.49 Aligned_cols=294 Identities=20% Similarity=0.292 Sum_probs=243.2
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. ++||++++++++. .+...+++++|++|+|+++++..++..++++||+ |++++|+|..+...
T Consensus 61 ~~Y~~~~G~-----~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~----Vli~~p~y~~~~~~ 131 (386)
T PRK09082 61 NQYPPMTGV-----AALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDE----VIVFDPSYDSYAPA 131 (386)
T ss_pred CCCCCCCCc-----HHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCE----EEEeCCCchhhHHH
Confidence 468888888 9999999998764 4666666568999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcccccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC--
Q 018172 104 TDYLRSGLYKWDGDANTFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ-- 168 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~-- 168 (360)
++..|++++.++.+.+++.. .++++++++++||||||.+++ +.+.++|+++++++|+|++|.+..
T Consensus 132 ~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~ 211 (386)
T PRK09082 132 IELAGGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFD 211 (386)
T ss_pred HHHcCCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccC
Confidence 99999999999886443322 357899999999999999987 345678888999999999997422
Q ss_pred ---CCcC---CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchh
Q 018172 169 ---YTPI---TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 169 ---~~~~---~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
..+. ....+++++++||||.||++|+|+||+++ ++++++.+.+......++.+.+.|.++..+++. . +.
T Consensus 212 ~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~--~~ 286 (386)
T PRK09082 212 GAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVA-PAALSAEFRKVHQYNTFTVNTPAQLALADYLRA--E--PE 286 (386)
T ss_pred CCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhC-CHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC--C--hH
Confidence 1222 22357899999999999999999999999 899999999988777788999999999888762 2 38
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-----h-HHHHHHHHhhCeeeeCC
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-----D-EDCEKLLRAERIMARGG 316 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~l~~~gI~~~pg 316 (360)
++++.++.++++++++.+.|++. ++.+..+.+++ |+|+++++ . +.+..+++++||.+.||
T Consensus 287 ~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg 352 (386)
T PRK09082 287 HYLELPAFYQAKRDRFRAALANS-RFKLLPCEGTY-------------FQLVDYSAISDLDDVEFCQWLTREHGVAAIPL 352 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCeeE-------------EEEEeccccCCCCHHHHHHHHHHhCCEEEeCc
Confidence 89999999999999999999986 45555555555 77877652 2 44455678889999999
Q ss_pred CCCCC---CCCeEEEEecCChHHHHHHHHHHHH
Q 018172 317 RRFGA---DAKYARVSMLSREEIFNIFLERLSA 346 (360)
Q Consensus 317 ~~f~~---~~~~~R~s~~~~~e~~~~~~~~l~~ 346 (360)
+.|+. ..+++|++++.+++++++++++|++
T Consensus 353 ~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 353 SVFYADPFPHRLVRLCFAKQEETLDAAAERLCQ 385 (386)
T ss_pred HHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 98853 3579999998899999999999875
No 50
>PLN02231 alanine transaminase
Probab=100.00 E-value=1.7e-40 Score=321.27 Aligned_cols=305 Identities=17% Similarity=0.216 Sum_probs=243.2
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYP 101 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~ 101 (360)
...|+++.|. ++||+++++++..+ |.+++++ +|++|+|+++++.+++..++. +||. |+++.|+|+.|.
T Consensus 161 ~~~Y~~s~G~-----~~lReaIA~~~~~r~g~~~~pe-~I~iT~Ga~~ai~~~~~~l~~~~gd~----Vli~~P~Y~~y~ 230 (534)
T PLN02231 161 TGAYSHSQGI-----KGLRDAIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSEKDG----ILCPIPQYPLYS 230 (534)
T ss_pred ccCcCCCCCc-----HHHHHHHHHHHHhccCCCCCcc-cEEEeCCHHHHHHHHHHHhccCCCCE----EEEeCCCChhHH
Confidence 4569999998 99999999998654 7777775 899999999999999999984 7998 999999999999
Q ss_pred HHHHHhCCeeeeecCCcc---cccc-------C------CCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEe
Q 018172 102 AETDYLRSGLYKWDGDAN---TFDK-------N------NGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHD 161 (360)
Q Consensus 102 ~~~~~~g~~~~~~~~~~~---~~~~-------~------~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D 161 (360)
..++..|++++.++++.+ +++. + .++|+++++|||||||.++++ .+.++|++++++||+|
T Consensus 231 ~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~D 310 (534)
T PLN02231 231 ASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLAD 310 (534)
T ss_pred HHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 999999999999988743 2221 1 168999999999999999993 4567888899999999
Q ss_pred ecccCCCC------CcCC------C---CCCccEEEecccccc-CCCCceEEEEeec--CHHHHHHHHHHHhhccccCCh
Q 018172 162 LAYYWPQY------TPIT------G---AADHDIMLFTLSKCT-GHAGSRIGWALVK--DTEVARKMTRFIELGSIGVSK 223 (360)
Q Consensus 162 ~ay~~~~~------~~~~------~---~~~~~i~~~S~sK~~-~~~G~r~G~~~~~--~~~~~~~l~~~~~~~~~~~~~ 223 (360)
|+|.+..+ .++. + ...++++++||||.+ +++|+|+||+++. ++++++.+.+... ...+.+.
T Consensus 311 EvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~-~~~~s~~ 389 (534)
T PLN02231 311 EVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVAS-VNLCSNI 389 (534)
T ss_pred ccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHh-hhcCCCh
Confidence 99985322 1211 1 112589999999975 8999999999863 6889999987765 4567788
Q ss_pred HHHHHHHHHhcccC---CCchhH---HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccC-
Q 018172 224 ESQLRAAKILGIVS---DDYPNF---FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLES- 296 (360)
Q Consensus 224 ~~~~~~~~~l~~~~---~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 296 (360)
+.|.++..+++... ..++.+ .+++++.++++++.+.+.|++++++.+..|.|++ |+|+++
T Consensus 390 ~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Ggf-------------ylw~~l~ 456 (534)
T PLN02231 390 SGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGAM-------------YLFPRIH 456 (534)
T ss_pred HHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeee-------------EEecccc
Confidence 99999888886321 233343 4456899999999999999999888888888888 455332
Q ss_pred -Cc-------------h-HHHHHHHHhhCeeeeCCCCCCC--CCCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 297 -KE-------------D-EDCEKLLRAERIMARGGRRFGA--DAKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 297 -~~-------------~-~~~~~~l~~~gI~~~pg~~f~~--~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
+. . ..+..+|+++||.++||+.|+. +..++|+++..++|++++++++|.+++++.-
T Consensus 457 lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~e~l~eal~RL~~~~~~~~ 529 (534)
T PLN02231 457 LPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIVSRLTEFHKSFM 529 (534)
T ss_pred CcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 21 1 2346678888999999999985 3457999997799999999999999887653
No 51
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=2.3e-40 Score=313.15 Aligned_cols=299 Identities=18% Similarity=0.233 Sum_probs=241.5
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|+++.|. ++||++++++++.. |..+++ ++|++|+|+++++.+++..++++||+ |++++|+|..+...
T Consensus 64 ~~Y~~~~g~-----~~lr~~ia~~~~~~~g~~~~~-~~i~it~G~~~al~~~~~~~~~~gd~----Vl~~~p~y~~~~~~ 133 (398)
T PRK08363 64 NYYGPSEGL-----PELREAIVKREKRKNGVDITP-DDVRVTAAVTEALQLIFGALLDPGDE----ILIPGPSYPPYTGL 133 (398)
T ss_pred CCCCCCCCc-----HHHHHHHHHHHHHhcCCCCCh-hhEEEeCCHHHHHHHHHHHhCCCCCE----EEEcCCCCcchHHH
Confidence 458888887 99999999998754 666766 48999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeee-cCCcccccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC
Q 018172 104 TDYLRSGLYKW-DGDANTFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY 169 (360)
Q Consensus 104 ~~~~g~~~~~~-~~~~~~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~ 169 (360)
++..|.+++.+ +.+.+++.. +++++++++++||||||.+++ +.+.++|+++++++|+|++|.+..+
T Consensus 134 ~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~ 213 (398)
T PRK08363 134 VKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTY 213 (398)
T ss_pred HHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhcc
Confidence 99999998887 454444322 257899999999999999998 3456778889999999999985221
Q ss_pred ----CcCC--CCCCccEEEeccccccCCCCceEEEEee-cCHHHHHHHHHHHhh---ccccCChHHHHHHHHHhcccCCC
Q 018172 170 ----TPIT--GAADHDIMLFTLSKCTGHAGSRIGWALV-KDTEVARKMTRFIEL---GSIGVSKESQLRAAKILGIVSDD 239 (360)
Q Consensus 170 ----~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~-~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~ 239 (360)
.+.. ....++++++||||.|+++|+|+||+++ .++++++.+...... ...+.+.+.|.++..++.. .
T Consensus 214 ~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~- 290 (398)
T PRK08363 214 EGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTG--P- 290 (398)
T ss_pred CCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhC--C-
Confidence 1111 2345799999999999999999999997 356777766544321 2367899999999998863 2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-----h-HHHHHHHHhhCeee
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-----D-EDCEKLLRAERIMA 313 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~l~~~gI~~ 313 (360)
++++++.++.++++++.+.+.|++++++.+..|.+++ |+|+.++. . +.+.++|.++||.+
T Consensus 291 -~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~-------------~~~~~l~~~~~~~~~~~~~~~l~~~gV~v 356 (398)
T PRK08363 291 -MDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAF-------------YIFPRIEEGPWKDDKEFVLDVLHEAHVLF 356 (398)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEE-------------EEEEEeccCCCCCHHHHHHHHHHhCCEEE
Confidence 3899999999999999999999988666665666665 66766542 3 56678889999999
Q ss_pred eCCCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 314 RGGRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 314 ~pg~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
+||..|+. .++|+|++++.+++++++++++|++++.+
T Consensus 357 ~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 357 VHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred eCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 99999975 36799999977889999999999998865
No 52
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.6e-40 Score=309.79 Aligned_cols=288 Identities=20% Similarity=0.256 Sum_probs=237.9
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhc-CCC-CCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVV-DNA-VSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYP 101 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~-~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~ 101 (360)
..|+++.|. ++||++++++++.+ |.+ +.+ ++|++|+|+++++..++..+ +++||. |++++|+|+.+.
T Consensus 50 ~~Y~~~~G~-----~~lr~~ia~~~~~~~~~~~~~~-~~I~it~G~~~~i~~~~~~l~~~~gd~----Vl~~~p~y~~~~ 119 (357)
T TIGR03539 50 PGYPQTWGT-----PELREAIVDWLERRRGVPGLDP-TAVLPVIGTKELVAWLPTLLGLGPGDT----VVIPELAYPTYE 119 (357)
T ss_pred CCCCcccCC-----HHHHHHHHHHHHHhcCCCCCCc-CeEEEccChHHHHHHHHHHHcCCCCCE----EEECCCCcHHHH
Confidence 468888888 99999999998655 665 666 58999999999999998888 799998 999999999999
Q ss_pred HHHHHhCCeeeeecCCccccccCCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCCC----Cc-C
Q 018172 102 AETDYLRSGLYKWDGDANTFDKNNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQY----TP-I 172 (360)
Q Consensus 102 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~~----~~-~ 172 (360)
..++..|++++.++ +.+.+. .+++++|++++||||||.+++. .+.++|+++|+++|+||+|.+..+ .. +
T Consensus 120 ~~~~~~g~~~~~v~-~~~~l~-~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~ 197 (357)
T TIGR03539 120 VGALLAGATPVAAD-DPTELD-PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSIL 197 (357)
T ss_pred HHHHhcCCEEeccC-ChhhcC-ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccce
Confidence 99999999998885 333333 2578999999999999999983 456778889999999999974211 11 1
Q ss_pred -----CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHH
Q 018172 173 -----TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYG 247 (360)
Q Consensus 173 -----~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (360)
....+++++++||||.|+++|+|+||+++ ++++++.+.+.+.....+.+.+.|.++.++++ + ..++.+.
T Consensus 198 ~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~--~~~~~~~ 271 (357)
T TIGR03539 198 DPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAG-DPALVAELLTVRKHAGLMVPAPVQAAMVAALG---D--DGHVAEQ 271 (357)
T ss_pred ecccCCCccccEEEEeccccccCCCceeEEEEec-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHcC---C--HHHHHHH
Confidence 12346789999999999999999999998 89999999888776678899999999988886 3 2778889
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCCCC-CCCe
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRFGA-DAKY 325 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~~-~~~~ 325 (360)
++.++++++.+.+.|++. ++.+..|.+++ |+|++++.. ..+.+.|.++||.+.||..|+. .+++
T Consensus 272 ~~~~~~~~~~~~~~L~~~-g~~~~~p~~~~-------------~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~ 337 (357)
T TIGR03539 272 KARYAARRAQLKPALEKA-GFRIDHSEAGL-------------YLWATRGEDAWDTVDRLAELGILVAPGDFYGPAGSQH 337 (357)
T ss_pred HHHHHHHHHHHHHHHHHc-CCCCcCCCccE-------------EEEEECCCCHHHHHHHHHhCCEEECCccccCCCCCCe
Confidence 999999999999999987 45555565555 788887644 6677788899999999998864 3679
Q ss_pred EEEEecCChHHHHHHHHHH
Q 018172 326 ARVSMLSREEIFNIFLERL 344 (360)
Q Consensus 326 ~R~s~~~~~e~~~~~~~~l 344 (360)
+|+|++.++|++++++++|
T Consensus 338 iRis~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 338 VRVALTATDERIAAAVARL 356 (357)
T ss_pred EEEEecCCHHHHHHHHHhh
Confidence 9999988889999999876
No 53
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=7.1e-41 Score=308.98 Aligned_cols=284 Identities=15% Similarity=0.166 Sum_probs=222.2
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 23 LMSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 23 ~~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
..++|+++. ..+||++++++++. ++++|++|+|+++++..++. ++++| . |++++|+|+.+..
T Consensus 33 ~~~~Yp~~~------~~~lr~~ia~~~~~------~~~~I~it~Gs~~~l~~~~~-~~~~~-~----vv~~~P~y~~y~~ 94 (332)
T PRK06425 33 DISIYPEIS------YTDIEDQIKIYTQG------LKIKVLIGPGLTHFIYRLLS-YINVG-N----IIIVEPNFNEYKG 94 (332)
T ss_pred hcccCcCcC------HHHHHHHHHHHhCC------CcceEEECCCHHHHHHHHHH-HhCCC-c----EEEeCCChHHHHH
Confidence 446687655 39999999999997 66789999999999999987 56665 4 8888999999999
Q ss_pred HHHHhCCeeeeecCCcccccc----CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCCCC---c
Q 018172 103 ETDYLRSGLYKWDGDANTFDK----NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQYT---P 171 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~~~~~~----~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~~~---~ 171 (360)
+++..|++++.++.+..+.+. ..+++++++++||||||.+++. .+.++|+++++++|+||+|.+.... +
T Consensus 95 ~~~~~G~~v~~vp~~~~~~~~~~l~~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~ 174 (332)
T PRK06425 95 YAFTHGIRISALPFNLINNNPEILNNYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEE 174 (332)
T ss_pred HHHHcCCeEEEEeCCcccCcHHHHhhcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchh
Confidence 999999999999876433321 2478999999999999999993 3456677799999999999854321 1
Q ss_pred ---CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHH
Q 018172 172 ---ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGR 248 (360)
Q Consensus 172 ---~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 248 (360)
.....+++++++||||+|++||+|+||+++ ++++++.+.+.... .+.+.+.+.+ +.. ...+.++++.+
T Consensus 175 ~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~-~~~li~~l~~~~~~--~~~~~~~~~~----l~~--~~~~~~~~~~~ 245 (332)
T PRK06425 175 DVLLNRSYGNVIIGRSLTKILGIPSLRIGYIAT-DDYNMKISRKITEP--WSVCDPAIDF----IRS--IDLDYVAKHSL 245 (332)
T ss_pred HHHHhccCCCEEEEeecHHhcCCchhhheeeec-CHHHHHHHHHcCCC--CccCHHHHHH----HHH--hhhHHHHHHHH
Confidence 123457899999999999999999999999 89999999876432 3344343322 221 12236778899
Q ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCC-CCCeEE
Q 018172 249 RLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGA-DAKYAR 327 (360)
Q Consensus 249 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~-~~~~~R 327 (360)
+.++++|+++.+.|++++ +....+ +.++|+|+++++...+.+.|.++||.++||..|+. +++|+|
T Consensus 246 ~~~~~~r~~l~~~L~~~g-~~~~~~-------------~~g~f~~~~~~~~~~~~~~l~~~gi~v~~~~~f~~~~~~~iR 311 (332)
T PRK06425 246 DIMENERSYLINNLEAMG-FRAAGD-------------PSANFITFMIPDAHDFYSYLLKNGILVRLLDDYECLGEQYIR 311 (332)
T ss_pred HHHHHHHHHHHHHHHHCC-CEECCC-------------CCceEEEEEcCCHHHHHHHHHHCCeEEEECCCCCCCCCCEEE
Confidence 999999999999999884 433222 33458899987656677777789999999999954 467999
Q ss_pred EEecCChHHHHHHHHHHHHHH
Q 018172 328 VSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 328 ~s~~~~~e~~~~~~~~l~~~~ 348 (360)
||+ .+++++++++++|++++
T Consensus 312 is~-~~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 312 IAI-RRRSFNIKLVNALRNFL 331 (332)
T ss_pred EEe-CCHHHHHHHHHHHHHHh
Confidence 999 56778899999999876
No 54
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=5.4e-40 Score=309.64 Aligned_cols=298 Identities=20% Similarity=0.267 Sum_probs=242.4
Q ss_pred ccccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. ++||+++++++. .+|.+.+++++|++|+|+++++..++..++++||+ |+++.|+|..+..+
T Consensus 55 ~~Y~~~~g~-----~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~----vli~~p~y~~~~~~ 125 (387)
T PRK07777 55 NQYPPGPGI-----PELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDE----VLLIEPYYDSYAAV 125 (387)
T ss_pred CCCCCCCCC-----HHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCE----EEEeCCCchhhHHH
Confidence 569988888 999999999865 45777766557999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCccc----ccc-------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC
Q 018172 104 TDYLRSGLYKWDGDANT----FDK-------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ 168 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~----~~~-------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~ 168 (360)
++..|.+++.++.+.++ ++. ++++++|++++||||||.+++ +.+.++|+++++++|+||+|.+..
T Consensus 126 ~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~ 205 (387)
T PRK07777 126 IAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLV 205 (387)
T ss_pred HHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcc
Confidence 99999999988876542 221 357899999999999999997 245677888999999999997422
Q ss_pred C-----CcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCc
Q 018172 169 Y-----TPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 169 ~-----~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
+ .++. +..++++++.||||.||++|+|+||+++ ++++++.+.........+.+.+.|.++..++.. .
T Consensus 206 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~-- 280 (387)
T PRK07777 206 FDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACG-PAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDH--E-- 280 (387)
T ss_pred cCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEec-CHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhC--C--
Confidence 1 1222 2356899999999999999999999998 899999998877666777888899888887763 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-----ch-HHHHHHHHhhCeeee
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-----ED-EDCEKLLRAERIMAR 314 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~l~~~gI~~~ 314 (360)
+.++++.++.++++++.+.+.|+++ ++.+..+.+++ |+|++++ +. +.+..+++++||.+.
T Consensus 281 ~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~ 346 (387)
T PRK07777 281 DAWVAALRDSLQAKRDRLAAGLAEA-GFEVHDSAGTY-------------FLCADPRPLGYDDGTEFCRALPERVGVAAI 346 (387)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhC-CCCccCCCcce-------------EEEecccccCCCCHHHHHHHHHHhCCEEEe
Confidence 2889999999999999999999987 45555555555 6776653 23 444555567899999
Q ss_pred CCCCCCC----CCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 315 GGRRFGA----DAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 315 pg~~f~~----~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
||..|+. .++++|++++.+++++++++++|.+++.+
T Consensus 347 pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~~~ 386 (387)
T PRK07777 347 PMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRALRGR 386 (387)
T ss_pred CchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHHhcC
Confidence 9998863 24689999988999999999999988754
No 55
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.6e-40 Score=311.33 Aligned_cols=300 Identities=21% Similarity=0.272 Sum_probs=244.2
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|++..|. +++|++++++++.++..++++ +|++|+|++++++.++..++++||+ |++++|+|..+..++
T Consensus 60 ~~Y~~~~g~-----~~lr~~ia~~~~~~~~~~~~~-~i~~t~G~~~al~~~~~~l~~~gd~----Vl~~~p~y~~~~~~~ 129 (397)
T PRK07568 60 LAYSHSQGI-----PELREAFAKYYKKWGIDVEPD-EILITNGGSEAILFAMMAICDPGDE----ILVPEPFYANYNGFA 129 (397)
T ss_pred cCcCCCCCC-----HHHHHHHHHHHHHhCCCCCcc-eEEEcCChHHHHHHHHHHhcCCCCE----EEEecCCCccHHHHH
Confidence 458888888 999999999988777777664 8999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecCCc-ccccc----------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC-
Q 018172 105 DYLRSGLYKWDGDA-NTFDK----------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ- 168 (360)
Q Consensus 105 ~~~g~~~~~~~~~~-~~~~~----------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~- 168 (360)
+..|++++.++.+. +++.. ++++++|++++||||||.+++ +.+.++|+++++++|+|++|.+..
T Consensus 130 ~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~ 209 (397)
T PRK07568 130 TSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVY 209 (397)
T ss_pred HHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhccc
Confidence 99999999998752 33321 367899999999999999997 345677888999999999998432
Q ss_pred ----CCcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCch
Q 018172 169 ----YTPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 169 ----~~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
..+.. ...++++++.||||.|+++|+|+||++++++++++.+.+... ...+.+.+.|.++..+++. . +
T Consensus 210 ~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~--~--~ 284 (397)
T PRK07568 210 DGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQ-ARLSPPTLEQIGAAALLDT--P--E 284 (397)
T ss_pred CCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhh-ccCCCCcHHHHHHHHHhhC--C--H
Confidence 12222 235789999999999999999999999855788888766554 2468889999999998873 2 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHH-Hh-----hCeee
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLL-RA-----ERIMA 313 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l-~~-----~gI~~ 313 (360)
.++++.++.++++++.+.+.|++++++.+..|.|++ |+|++++. ...+.+.| ++ +||.+
T Consensus 285 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~-------------~~~~~l~~~~~~~~~~~l~~~~~~~~~gv~v 351 (397)
T PRK07568 285 SYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAF-------------YIIAKLPVDDAEDFAKWLLTDFNYNGETVMV 351 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcce-------------EEEEecCCCCHHHHHHHHHhhcccccceEEE
Confidence 889999999999999999999988666666666554 67888864 24444444 32 69999
Q ss_pred eCCCCCCC----CCCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 314 RGGRRFGA----DAKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 314 ~pg~~f~~----~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
.||..|+. .++++|++++.+++++++++++|.+++++.+
T Consensus 352 ~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~~~~l~~~l~~~~ 394 (397)
T PRK07568 352 APASGFYATPGLGKNEIRIAYVLNEEDLKRAMEILKEALEKYN 394 (397)
T ss_pred eCchHhcCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHhh
Confidence 99998842 3579999998788999999999999998755
No 56
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-40 Score=303.48 Aligned_cols=289 Identities=21% Similarity=0.289 Sum_probs=241.4
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH
Q 018172 23 LMSYLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP 101 (360)
Q Consensus 23 ~~~~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~ 101 (360)
..++|+++. . .+|+++++++++ . ++++|++++|+++.|..++..++.+||+ |+++.|+|..|.
T Consensus 50 ~~~rYPd~~-~-----~~l~~a~a~~~~~~------~~~~V~~gnGsde~i~~l~~~~~~~gd~----vl~~~Ptf~~Y~ 113 (356)
T COG0079 50 KLNRYPDPD-Y-----RELRAALAEYYGVV------DPENVLVGNGSDELIELLVRAFVEPGDT----VLIPEPTFSMYE 113 (356)
T ss_pred hhccCCCCc-H-----HHHHHHHHHHhCCC------CcceEEEcCChHHHHHHHHHHhhcCCCE----EEEcCCChHHHH
Confidence 356788774 3 999999999999 5 6679999999999999999999999998 999999999999
Q ss_pred HHHHHhCCeeeeecCCc-----ccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhh--cCcEEEEeecccCCCCCc
Q 018172 102 AETDYLRSGLYKWDGDA-----NTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRS--AEGKLIHDLAYYWPQYTP 171 (360)
Q Consensus 102 ~~~~~~g~~~~~~~~~~-----~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~--~~~~li~D~ay~~~~~~~ 171 (360)
..++..|++++.++.+. +.+.. ++++++|+++|||||||..++ +++.++.+. .+.++|+||||.+....+
T Consensus 114 ~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~ 193 (356)
T COG0079 114 IAAQLAGAEVVKVPLKEFRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPES 193 (356)
T ss_pred HHHHhcCCeEEEecccccccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCch
Confidence 99999999999998765 22221 247999999999999999998 445544442 389999999999754322
Q ss_pred CC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHH
Q 018172 172 IT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGR 248 (360)
Q Consensus 172 ~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 248 (360)
.. ...++++++.||||+||++|+|+||+++ ++++++.+.+.+. .++.|.+++.++.++++ ++ +++++.+
T Consensus 194 ~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia-~~~~i~~l~~vr~--p~~v~~~a~~aa~aal~---~~--~~~~~~~ 265 (356)
T COG0079 194 SLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIA-NPELIAALNKVRP--PFNVSSPALAAAIAALR---DA--DYLEESV 265 (356)
T ss_pred hhhhccCCCCEEEEEecHHhhhcchhceeeccC-CHHHHHHHHHhcC--CCCCCHHHHHHHHHHcc---cH--HHHHHHH
Confidence 22 3577799999999999999999999998 9999999999985 67889999999999887 44 8999999
Q ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch--HHHHHHHHhhCeeeeCCCCCCCCCCeE
Q 018172 249 RLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED--EDCEKLLRAERIMARGGRRFGADAKYA 326 (360)
Q Consensus 249 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~gI~~~pg~~f~~~~~~~ 326 (360)
+.+++.|+++.+.|++++ +.-.. ++.+||+++++++. ..+.+.|.++||.+|.....+..++|+
T Consensus 266 ~~~~~~r~rl~~~l~~~~-~~~v~-------------pS~aNFvlv~~~~~~~~~l~~~L~~~giivR~~~~~~~~~~~l 331 (356)
T COG0079 266 ERIREERERLYAALKALG-LFGVF-------------PSQANFVLVRVPDAEAAALAEALLKKGILVRDCSSVGLLPGYL 331 (356)
T ss_pred HHHHHHHHHHHHHHHhCC-CCeec-------------CCCCcEEEEECCCccHHHHHHHHHHCCEEEEeCCCCCCCCCeE
Confidence 999999999999999996 33122 25578999999863 578999999999999975544457799
Q ss_pred EEEecCChHHHHHHHHHHHHHHhc
Q 018172 327 RVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 327 R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
|+++ .++|+.++++++|.+++..
T Consensus 332 Ritv-gt~een~~ll~AL~~~~~~ 354 (356)
T COG0079 332 RITV-GTPEENDRLLAALREVLKG 354 (356)
T ss_pred EEEe-CCHHHHHHHHHHHHHHHhc
Confidence 9998 6666669999999998865
No 57
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=5.5e-40 Score=310.82 Aligned_cols=293 Identities=22% Similarity=0.238 Sum_probs=224.9
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|.+..|. ++||+++++++...+ + ++++|++|+|+++++..++ .++.+||+ |++++|+|..+..++
T Consensus 69 ~~Y~p~~g~-----~~lr~aia~~~~~~~--~-~~d~I~it~Ga~~al~~l~-~l~~~gd~----Vlv~~P~y~~~~~~~ 135 (402)
T TIGR03542 69 RGYGPEQGY-----PFLREAIAENDYRGR--I-DPEEIFISDGAKCDVFRLQ-SLFGSDNT----VAVQDPVYPAYVDSN 135 (402)
T ss_pred cCCCCCCCC-----HHHHHHHHHHHHhcC--C-CHHHEEECCCcHHHHHHHH-HhcCCCCE----EEEeCCCCcchHHHH
Confidence 458778887 999999999853222 3 4469999999999999864 56688998 999999999999999
Q ss_pred HHhCC-----------eeeeecCCc-ccccc----CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecc
Q 018172 105 DYLRS-----------GLYKWDGDA-NTFDK----NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAY 164 (360)
Q Consensus 105 ~~~g~-----------~~~~~~~~~-~~~~~----~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay 164 (360)
+..|+ +++.++.+. +++.. ..++++|++++||||||.+++ +.+.++|+++++++|+||+|
T Consensus 136 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y 215 (402)
T TIGR03542 136 VMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAY 215 (402)
T ss_pred HHcCCccccccccccceEEEeecchhhCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchh
Confidence 99999 988888764 34433 257899999999999999999 34567788899999999999
Q ss_pred cCCCC-----CcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHH--------HHHHHHHhhccccCChHHHHH
Q 018172 165 YWPQY-----TPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVA--------RKMTRFIELGSIGVSKESQLR 228 (360)
Q Consensus 165 ~~~~~-----~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~--------~~l~~~~~~~~~~~~~~~~~~ 228 (360)
.+... .++. ...+++++++||||.||+||+|+||+++ +++++ +.+.........+.+.+.|.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~-~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~ 294 (402)
T TIGR03542 216 SAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVV-PKELTYADGHSVIQDWERRQCTKFNGASYPVQRA 294 (402)
T ss_pred hhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEe-cHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHH
Confidence 85221 1221 2245789999999999999999999999 77776 222222222334688899998
Q ss_pred HHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch----HHHHH
Q 018172 229 AAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED----EDCEK 304 (360)
Q Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 304 (360)
+..++.. .. ..++.+.++.++++++.+.+.|+.++ +.+..+.+ ++|+|++++.. +....
T Consensus 295 ~~~~l~~--~~-~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~-------------~~f~~v~l~~~~~~~~l~~~ 357 (402)
T TIGR03542 295 AEAAYAG--EG-LQPILEAISYYMENARILRKALEAAG-FKVYGGEH-------------APYLWVKTPEGISSWDFFDF 357 (402)
T ss_pred HHHHHcC--cc-hhHHHHHHHHHHHHHHHHHHHHHhcC-ceecCCCc-------------eeEEEEECCCCCCHHHHHHH
Confidence 8887762 22 24567778899999999999999873 44433333 34899998752 34445
Q ss_pred HHHhhCeeeeCCCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 305 LLRAERIMARGGRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 305 ~l~~~gI~~~pg~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
+++++||.++||+.|+. ..+|+||+++.+++++++++++|++.+
T Consensus 358 l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~ 402 (402)
T TIGR03542 358 LLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVEACERIKEAL 402 (402)
T ss_pred HHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHhhC
Confidence 55577999999999975 368999998779999999999998753
No 58
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8e-41 Score=319.38 Aligned_cols=312 Identities=14% Similarity=0.152 Sum_probs=232.4
Q ss_pred cccCCCCccccccHHHHHHHHH-HHhhc-CCCCCC--CCcEEEcCChHHHHHHHHHh-----hcCCCCCCCceEEEeCCC
Q 018172 26 YLSDMGNVCWFLVPELAEAINN-LHHVV-DNAVSD--GRHIVIGTGSTQLYQAALYA-----LSSPGGPEPISVVSAAPY 96 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~-~~~~~-~~~~~~--~~~i~~t~G~t~~l~~~~~~-----l~~~gd~~~~~vl~~~p~ 96 (360)
.|+++.|. +++|+++++ ++... +....+ +++|++|+|+++++..++.+ ++++||+ |++++|+
T Consensus 129 ~Y~~~~g~-----~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~----Vlv~~P~ 199 (527)
T PRK09275 129 NYPVPDRM-----LKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDK----IALMTPI 199 (527)
T ss_pred CCCCCCCC-----HHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCE----EEEeCCC
Confidence 59999998 999999998 44432 222222 34899999999999999886 6899999 9999999
Q ss_pred CCCcHHHHHHhCC--eeeeecCCc-ccccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhh--hcCcEE
Q 018172 97 YSQYPAETDYLRS--GLYKWDGDA-NTFDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNR--SAEGKL 158 (360)
Q Consensus 97 ~~~~~~~~~~~g~--~~~~~~~~~-~~~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~--~~~~~l 158 (360)
|+.|..+++..|+ +++.++.+. +++.. ++++|+|++++||||||.++++ .+.++|+ +++++|
T Consensus 200 y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~I 279 (527)
T PRK09275 200 FTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMI 279 (527)
T ss_pred hHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEE
Confidence 9999999888754 445555432 23332 4689999999999999999993 3455674 359999
Q ss_pred EEeecccCCC--CCcCC-CCCCccEEEeccccccCCCCceEEEEeecCHH----HHHHH---------------------
Q 018172 159 IHDLAYYWPQ--YTPIT-GAADHDIMLFTLSKCTGHAGSRIGWALVKDTE----VARKM--------------------- 210 (360)
Q Consensus 159 i~D~ay~~~~--~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~----~~~~l--------------------- 210 (360)
|+||+|.+.. +.++. ...++++++.||||.|+++|||+||+++++++ +++.+
T Consensus 280 I~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~ 359 (527)
T PRK09275 280 ITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEK 359 (527)
T ss_pred EECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcch
Confidence 9999998532 22222 23578999999999999999999999994432 32222
Q ss_pred -----------HHHHhhccccCChHHHHHHH-----HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Q 018172 211 -----------TRFIELGSIGVSKESQLRAA-----KILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYP 274 (360)
Q Consensus 211 -----------~~~~~~~~~~~~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 274 (360)
+++....+.+.+.+.|.+++ ++++ . .+.+.+++++.+++|++.+.+.|. . .+....|.
T Consensus 360 ~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~---~-~~~~~~~~~~~~~~Rr~~l~~~Lg-~-~~~~~~p~ 433 (527)
T PRK09275 360 LKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLD---E-EDAYKKAMKDIIRRRYKALYEGLG-L-PEPEDPNN 433 (527)
T ss_pred hhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHh---C-chHHHHHHHHHHHHHHHHHHHHcC-C-CCcCCCCC
Confidence 45566677889999999733 3344 2 238899999999999999999883 2 22334678
Q ss_pred CcccccccccCCCC---C--CcccccC-Cch-HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHH
Q 018172 275 LEYCNFTGKFTNSH---P--GFAWLES-KED-EDCEKLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSA 346 (360)
Q Consensus 275 ~~~~~~~~~~~~~~---~--~~~~~~~-~~~-~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~ 346 (360)
|++|.|.+...... + ..-|+.- .++ +++.+++.++||.+.||..||...+++|+|++. ++++++++.++|.+
T Consensus 434 g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~ 513 (527)
T PRK09275 434 AAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKIGKAIRK 513 (527)
T ss_pred eeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEEecCCHHHHHHHHHHHHH
Confidence 88877765432110 1 1112211 123 778899999999999999998767899999985 88999999999999
Q ss_pred HHhchh
Q 018172 347 IQGGSI 352 (360)
Q Consensus 347 ~~~~~~ 352 (360)
++.+..
T Consensus 514 ~l~~y~ 519 (527)
T PRK09275 514 LLDEYY 519 (527)
T ss_pred HHHHHH
Confidence 997654
No 59
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-40 Score=307.81 Aligned_cols=288 Identities=20% Similarity=0.191 Sum_probs=230.5
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCC-CCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPG-GPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~g-d~~~~~vl~~~p~~~~~~~~ 103 (360)
.+|+++. . ++||++++++++. ++++|++|+|+++++++++..++++| +. |++++|+|..+...
T Consensus 54 ~~Y~~~~-~-----~~lr~~ia~~~~~------~~~~I~~t~G~~~~l~~~~~~~~~~g~~~----vlv~~p~y~~~~~~ 117 (364)
T PRK04781 54 RRYPDPQ-P-----PGLRSALAALYGC------APEQLLIGRGSDEAIDLLVRALCVPGRDA----VLVTPPVFGMYAVC 117 (364)
T ss_pred ccCCCCC-H-----HHHHHHHHHHhCc------ChHHEEEeCCHHHHHHHHHHHhcCCCCCe----EEEcCCChHHHHHH
Confidence 4466544 3 8999999999975 55799999999999999999999888 67 99999999999998
Q ss_pred HHHhCCeeeeecCC--cccccc----------CCCeeEEEEcCCCCCCcccchH-HHH---HHhhhcCcEEEEeecccCC
Q 018172 104 TDYLRSGLYKWDGD--ANTFDK----------NNGAYIEVVNSPNNPDGTIREA-VLA---KVNRSAEGKLIHDLAYYWP 167 (360)
Q Consensus 104 ~~~~g~~~~~~~~~--~~~~~~----------~~~~~~i~~~~p~NPtG~~~~~-~~~---~~~~~~~~~li~D~ay~~~ 167 (360)
++..|++++.++++ .+++.. ++++++|++++||||||.+++. .+. +.++ +++++|+||+|.+.
T Consensus 118 ~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f 196 (364)
T PRK04781 118 ARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEF 196 (364)
T ss_pred HHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhh
Confidence 89999999999874 233321 3578999999999999999993 333 3344 58899999999854
Q ss_pred CCC----cCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 168 QYT----PITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 168 ~~~----~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
... ...+..+++++++||||+||++|+|+||+++ ++++++.+.+.+. .++.+.++|.++..++. +....+
T Consensus 197 ~~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~-~~~l~~~l~~~~~--~~~~~~~~~~~a~~~l~---~~~~~~ 270 (364)
T PRK04781 197 SDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIA-NAELIAVLRRCQA--PYPVPTPCAALAEQALS---APALAV 270 (364)
T ss_pred cCCcchHHHHhhCCCEEEEecChhhcccccceeeeeeC-CHHHHHHHHhccC--CCCCCHHHHHHHHHHHh---cccHHH
Confidence 321 2234567899999999999999999999998 8999999998764 46788899998888776 322245
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADA 323 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~ 323 (360)
..+..+.++++|+.+.+.|+.++++....| +.++|+|+++++.+.+.+.|.++||.++||..|+..+
T Consensus 271 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p-------------~~g~f~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~ 337 (364)
T PRK04781 271 TARRVAEVRAERERLHAALAQLPGVRRVYP-------------SQGNFLLVRFDDAEAAFQALLAAGVVVRDQRAAPRLS 337 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCeECC-------------CCCcEEEEEcCCHHHHHHHHHHCCeEEeeCCCCCCCC
Confidence 666667889999999999998865432223 4455899999876778888999999999998775457
Q ss_pred CeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 324 KYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 324 ~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
+|+||++ ..++++++++++|+++..
T Consensus 338 ~~~Ris~-~~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 338 DALRITL-GTPEQNDRVLAALQRTQA 362 (364)
T ss_pred CeEEEeC-CCHHHHHHHHHHHHHHHh
Confidence 8999998 567888999999988653
No 60
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=307.29 Aligned_cols=294 Identities=21% Similarity=0.255 Sum_probs=241.0
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. ++||++++++++.. |..+++ ++|++|+|+++++..++..++++||+ |++++|+|..+..+
T Consensus 61 ~~Y~~~~G~-----~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~----Vlv~~p~y~~~~~~ 130 (386)
T PRK07550 61 HLYGPVEGL-----PELREAYAAHYSRLYGAAISP-EQVHITSGCNQAFWAAMVTLAGAGDE----VILPLPWYFNHKMW 130 (386)
T ss_pred cCCCCCCCC-----HHHHHHHHHHHHHHhCCCCCc-ceEEEecCcHHHHHHHHHHhcCCCCE----EEEcCCCCcchHHH
Confidence 458888887 99999999998744 666665 58999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCc-ccccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC
Q 018172 104 TDYLRSGLYKWDGDA-NTFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY 169 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~-~~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~ 169 (360)
++..|++++.++.+. +++.. +.+++++++++||||||.+++ +.+.++|+++++++|+|++|.+...
T Consensus 131 ~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~ 210 (386)
T PRK07550 131 LDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDS 210 (386)
T ss_pred HHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhcc
Confidence 999999999999874 34432 357899999999999999998 3466788889999999999984211
Q ss_pred -----CcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCch
Q 018172 170 -----TPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 170 -----~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
.+.. +..++++++.||||.||++|+|+||+++ ++++++.+.........+.+.+.|.++..+++. ++
T Consensus 211 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~-~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~----~~ 285 (386)
T PRK07550 211 GGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVA-SPARIAEIEKFMDTVAICAPRIGQIAVAWGLPN----LA 285 (386)
T ss_pred CCCCCcchhhCCCccccEEEEecchhhccCcccceEeeec-CHHHHHHHHHHHhhcccCCCcHHHHHHHHHhcc----HH
Confidence 1121 2246789999999999999999999999 889999998888777788899999999998873 34
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHH-HHHHhhCeeeeCC
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCE-KLLRAERIMARGG 316 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~l~~~gI~~~pg 316 (360)
.++++.++.++++++.+.+.|..++++.+ .+.++ +|+|++++. ...+. .+++++||.++||
T Consensus 286 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~g~-------------~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg 351 (386)
T PRK07550 286 DWRAGNRAEIARRRDAFRAVFARLPGWEL-LASGA-------------YFAYVRHPFPDRPSREVARRLAKEAGILCLPG 351 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcee-CCCce-------------EEEEecCCCCCCCHHHHHHHHHHhcCEEEeCc
Confidence 88999999999999999999998744332 23333 378888764 24444 4567789999999
Q ss_pred CCCCC-CCCeEEEEecC-ChHHHHHHHHHHHHH
Q 018172 317 RRFGA-DAKYARVSMLS-REEIFNIFLERLSAI 347 (360)
Q Consensus 317 ~~f~~-~~~~~R~s~~~-~~e~~~~~~~~l~~~ 347 (360)
..|+. .++++|++++. +++++++++++|.++
T Consensus 352 ~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 352 TMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred hhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 99974 36799999986 899999999999876
No 61
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=4.6e-40 Score=313.03 Aligned_cols=302 Identities=18% Similarity=0.192 Sum_probs=233.5
Q ss_pred cccccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcC-----CCCCCCceEEE-eCCC
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSS-----PGGPEPISVVS-AAPY 96 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~-----~gd~~~~~vl~-~~p~ 96 (360)
...|+++.|. ++||+++++++. .+|..+++ ++|++|+|+++++.+++..+++ +||. |++ ++|+
T Consensus 67 ~~~Y~~~~G~-----~~LR~aia~~~~~~~g~~v~~-~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~----v~i~~~P~ 136 (416)
T PRK09440 67 LGNYDGPQGK-----DELIEALAALLNERYGWNISP-QNIALTNGSQSAFFYLFNLFAGRRADGSLKK----ILFPLAPE 136 (416)
T ss_pred cccCCCCCCC-----HHHHHHHHHHHHHHhCCCCCh-hhEEEccChHHHHHHHHHHHhccccCCCCCe----EEEecCCC
Confidence 3579999998 999999999985 45777766 4899999999999999999985 4776 999 6999
Q ss_pred CCCcHHHHHHhC------Ceeeeec-------CCccccccCCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEE
Q 018172 97 YSQYPAETDYLR------SGLYKWD-------GDANTFDKNNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLI 159 (360)
Q Consensus 97 ~~~~~~~~~~~g------~~~~~~~-------~~~~~~~~~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li 159 (360)
|+.|...+...| ..+..++ +|.+.++.+++++++++++||||||.+++. .+.++|+++++++|
T Consensus 137 y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI 216 (416)
T PRK09440 137 YIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLHIDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLL 216 (416)
T ss_pred chhhHHHhhccCceeecccccccccccccccCCCHHHcccCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEE
Confidence 999988665433 2222221 233333334578999999999999999993 45567888999999
Q ss_pred EeecccCCC--C--CcC-CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhc
Q 018172 160 HDLAYYWPQ--Y--TPI-TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILG 234 (360)
Q Consensus 160 ~D~ay~~~~--~--~~~-~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 234 (360)
+||+|.... . ... ....+++++++||||+ ++||+|+||+++ ++++++.+.........+.+.+.|.++.++++
T Consensus 217 ~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~-~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~ 294 (416)
T PRK09440 217 IDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIA-DEEIIEALSNMNGIISLAPGRLGPAIAAEMIE 294 (416)
T ss_pred EeCCccccCCCcchhhcCccccCCeEEEeccccc-CCCcceEEEEeC-CHHHHHHHHHHHHHhccCCCcHHHHHHHHHhc
Confidence 999997421 1 111 1125789999999995 889999999998 89999999988877778899999999999887
Q ss_pred ccCCCchhHHHH-HHHHHHHHHHHHHHHHHhc-CC--cccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHH
Q 018172 235 IVSDDYPNFFEY-GRRLMSERWNMLRQVIRQS-GV--FGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLL 306 (360)
Q Consensus 235 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l 306 (360)
. ..+..+..+ .++.++++++.+.+.|.++ +. +.+..|.|++ |+|++++. ...+.+.|
T Consensus 295 ~--~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~-------------fiw~~~~~~~~~~~~~~~~l 359 (416)
T PRK09440 295 S--GDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAI-------------FLWLWFKDLPITTEELYQRL 359 (416)
T ss_pred c--chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCce-------------EEEEECCCCCCCHHHHHHHH
Confidence 2 334455544 6888999999999999765 22 2333455544 88988864 25666778
Q ss_pred HhhCeeeeCCCCCCCC--------CCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 307 RAERIMARGGRRFGAD--------AKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 307 ~~~gI~~~pg~~f~~~--------~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
.++||.++||+.|+.. .+++|||++.+++++++++++|++++.+.+
T Consensus 360 ~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~~~~~ 413 (416)
T PRK09440 360 KARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAILAEEVEKAY 413 (416)
T ss_pred HHCCEEEechHhhCCCCccccCCcCceEEEEecCCHHHHHHHHHHHHHHHHHHh
Confidence 8899999999988431 359999997789999999999999987643
No 62
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=2.5e-39 Score=306.37 Aligned_cols=298 Identities=18% Similarity=0.284 Sum_probs=238.0
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. +++|++++++++.. +..+.+ ++|++|+|+++++.+++.+++++||+ |++++|+|..+...
T Consensus 67 ~~Y~~~~g~-----~~lr~~ia~~l~~~~~~~~~~-~~ii~t~G~t~al~~~~~~l~~~gd~----Vlv~~p~y~~~~~~ 136 (403)
T TIGR01265 67 NGYAPSVGA-----LAAREAVAEYLSSDLPGKLTA-DDVVLTSGCSQAIEICIEALANPGAN----ILVPRPGFPLYDTR 136 (403)
T ss_pred CCCCCCCCC-----HHHHHHHHHHHHhhcCCCCCH-HHEEEecChHHHHHHHHHHhCCCCCE----EEEeCCCchhHHHH
Confidence 468778887 99999999999853 555555 58999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcc-c--ccc-------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC
Q 018172 104 TDYLRSGLYKWDGDAN-T--FDK-------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY 169 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~--~~~-------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~ 169 (360)
++..|++++.++++.+ + ++. +++++++++++||||||.+++ +.+.++|+++|+++|+|++|.+..+
T Consensus 137 ~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~ 216 (403)
T TIGR01265 137 AAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVF 216 (403)
T ss_pred HHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccc
Confidence 9999999998876432 2 221 357899999999999999997 3566778889999999999985322
Q ss_pred -----CcCCC--CCCccEEEeccccccCCCCceEEEEeecCH-H-----HHHHHHHHHhhccccCChHHHHHHHHHhccc
Q 018172 170 -----TPITG--AADHDIMLFTLSKCTGHAGSRIGWALVKDT-E-----VARKMTRFIELGSIGVSKESQLRAAKILGIV 236 (360)
Q Consensus 170 -----~~~~~--~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~-~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (360)
.++.. ...++++++||||+|++||+|+||++++++ + +++.+..... ...+++.+.|.++..+++.
T Consensus 217 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~- 294 (403)
T TIGR01265 217 GDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILEN- 294 (403)
T ss_pred CCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHh-
Confidence 22222 234689999999999999999999998433 2 4444544432 2457889999999998863
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC--------ch-HHHHHHHH
Q 018172 237 SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--------ED-EDCEKLLR 307 (360)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~l~ 307 (360)
..+.++++.++.++++++.+.+.|+.++++.+..|.+++ |+|++++ +. +.+..+++
T Consensus 295 --~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~-------------f~~~~~~~~~~~~~~~~~~~~~~l~~ 359 (403)
T TIGR01265 295 --TPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAM-------------YLMVKLELELFPEIKDDVDFCEKLVR 359 (403)
T ss_pred --ChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcee-------------EEEEeccccccCCCCCHHHHHHHHHH
Confidence 224899999999999999999999988666555565555 7888775 23 44455577
Q ss_pred hhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 308 AERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 308 ~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
++||.+.||..|+. ++++|++++.+++.+++++++|.+++++
T Consensus 360 ~~gv~v~pg~~f~~-~~~iRis~~~~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 360 EESVICLPGSAFGL-PNWVRITITVPESMLEEACSRIKEFCER 401 (403)
T ss_pred hCCEEEeCccccCC-CCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 88999999999984 7899999988889999999999999865
No 63
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=2.1e-39 Score=307.13 Aligned_cols=301 Identities=18% Similarity=0.185 Sum_probs=234.4
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCC-CCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDN-AVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~-~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|+++.|. ++||++++++++.++. .+++ ++|++|+|+++++..++..++++||+ |++++|+|..+...
T Consensus 66 ~~Y~~~~G~-----~~lr~~ia~~~~~~~~~~~~~-~~i~~t~G~~~~l~~~~~~~~~~gd~----Vlv~~p~y~~~~~~ 135 (404)
T PRK09265 66 QGYSDSKGL-----FSARKAIMQYYQQKGIPDVDV-DDIYIGNGVSELIVMAMQALLNNGDE----VLVPAPDYPLWTAA 135 (404)
T ss_pred CCCCCCCCc-----HHHHHHHHHHHhccCCCCCCc-ccEEEeCChHHHHHHHHHHhCCCCCE----EEEeCCCCcChHHH
Confidence 569999998 9999999999876655 4555 58999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcc-cccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC-
Q 018172 104 TDYLRSGLYKWDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ- 168 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~- 168 (360)
++..|.+++.++.+.+ ++.. ++++++|++++||||||.+++ +.+.++|+++++++|+||+|.+..
T Consensus 136 ~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~ 215 (404)
T PRK09265 136 VSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILY 215 (404)
T ss_pred HHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccC
Confidence 9999999988876532 3222 357899999999999999998 245567888999999999998532
Q ss_pred ----CCcCCC--CCCccEEEeccccccCCCCceEEEEeec-CHH----HHHHHHHHHhhccccCChHHHHHHHHHhcccC
Q 018172 169 ----YTPITG--AADHDIMLFTLSKCTGHAGSRIGWALVK-DTE----VARKMTRFIELGSIGVSKESQLRAAKILGIVS 237 (360)
Q Consensus 169 ----~~~~~~--~~~~~i~~~S~sK~~~~~G~r~G~~~~~-~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 237 (360)
..++.. ...++++++||||+|++||+|+||++++ ++. +++.+... .....+.|.++|.++.++|...
T Consensus 216 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~- 293 (404)
T PRK09265 216 DGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGY- 293 (404)
T ss_pred CCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCc-
Confidence 122221 2336889999999999999999999962 443 34444332 2245678899999999988621
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-------h-HHHHHHHHhh
Q 018172 238 DDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-------D-EDCEKLLRAE 309 (360)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~l~~~ 309 (360)
+.. ..+.+.++.++++++.+.+.|++++++.+..|.+++ |+|++++. . +.+.+++.++
T Consensus 294 ~~~-~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~-------------~l~~~~~~~~~~~~~~~~~~~~~l~~~ 359 (404)
T PRK09265 294 QSI-NELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGAL-------------YAFPKLDPKVYPIHDDEQFVLDLLLQE 359 (404)
T ss_pred hhH-HHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcce-------------EEEEEecccccCCCCHHHHHHHHHHhC
Confidence 111 122222356788899999999988666666666665 77877642 3 5688899999
Q ss_pred CeeeeCCCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 310 RIMARGGRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 310 gI~~~pg~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
||.+.||..|+. .++++|++++.++|++++++++|.++++..
T Consensus 360 gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 360 KVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred CEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999964 468999999779999999999999988753
No 64
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=9e-40 Score=304.13 Aligned_cols=285 Identities=18% Similarity=0.263 Sum_probs=231.1
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..+|++. +. ++||++++++++. ++++|++|+|+++++..++..+ .+ ++ |++++|+|+.+...
T Consensus 48 ~~~Y~~~-~~-----~~lr~~ia~~~~~------~~~~i~it~Ga~~~l~~~~~~~-~~-~~----v~i~~P~y~~~~~~ 109 (354)
T PRK06358 48 LVEYPDP-DY-----LELRKRIASFEQL------DLENVILGNGATELIFNIVKVT-KP-KK----VLILAPTFAEYERA 109 (354)
T ss_pred hhcCCCc-cH-----HHHHHHHHHHhCC------ChhhEEECCCHHHHHHHHHHHh-CC-Cc----EEEecCChHHHHHH
Confidence 3457654 45 9999999999975 5579999999999999999886 43 55 99999999999999
Q ss_pred HHHhCCeeeeecCCcc-cccc--------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCCCC
Q 018172 104 TDYLRSGLYKWDGDAN-TFDK--------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQYT 170 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~~~--------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~~~ 170 (360)
++..|++++.++.+.+ ++.. ..+++++++++||||||.+++. ++.++|+++++++|+||+|.+..+.
T Consensus 110 ~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~ 189 (354)
T PRK06358 110 LKAFDAEIEYAELTEETNFAANEIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEE 189 (354)
T ss_pred HHHcCCeeEEEeCccccCCCccHHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCC
Confidence 9999999999987643 3222 2468999999999999999983 4556787899999999999853221
Q ss_pred ----c---CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 171 ----P---ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 171 ----~---~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
+ ..+..+++++++||||+||++|+|+||++++++.+++.+.+.+. .++.+.+.|.++..+++ +. .+
T Consensus 190 ~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~---~~--~~ 262 (354)
T PRK06358 190 NETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMRE--PWSINTFADLAGQTLLD---DK--EY 262 (354)
T ss_pred ccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC--CCcchHHHHHHHHHHhc---cH--HH
Confidence 1 12345789999999999999999999999856788888887764 46788999999999886 32 67
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCC-C
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGA-D 322 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~-~ 322 (360)
+++.++.++++++.+.+.|++++++.+..+ .++|+|+++++...+.+.|.++||.++||..|+. +
T Consensus 263 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--------------~g~f~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~ 328 (354)
T PRK06358 263 IKKTIQWIKEEKDFLYNGLSEFKGIKVYKP--------------SVNFIFFKLEKPIDLRKELLKKGILIRSCSNYRGLD 328 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcEEcCC--------------cceEEEEEcCchHHHHHHHHHCCeEEEECCCCCCCC
Confidence 899999999999999999998865444333 3348899998776666777789999999999954 5
Q ss_pred CCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 323 AKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 323 ~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
++++||++ .++++.++++++|++++
T Consensus 329 ~~~iRls~-~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 329 ENYYRVAV-KSREDNKKLLKALEVIL 353 (354)
T ss_pred CCEEEEEe-CCHHHHHHHHHHHHHHh
Confidence 68999998 77778899999999876
No 65
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=100.00 E-value=1.8e-41 Score=296.07 Aligned_cols=342 Identities=57% Similarity=1.011 Sum_probs=268.6
Q ss_pred CchHHHHHHhcCCceeeecCCcccccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc
Q 018172 1 MAFEAFWRKLGDKCTMVISGSDLMSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS 80 (360)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~ 80 (360)
+||++||++..+.+...+++|+.|.++.+..+. |+..++|++.|.++++.-|..++....|++++|+||.++.++.+|.
T Consensus 9 ~~~E~yW~~~~~~~avvi~gw~rMSY~~~~~~~-~f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALS 87 (363)
T PF04864_consen 9 TFFEPYWRRHGDSSAVVIPGWHRMSYFSDSSNG-WFISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALS 87 (363)
T ss_dssp GGGHHHHCCTHHHH-EEE-TTTT-SSSS-TTSS-TTS-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHC
T ss_pred hhhHHHHHhcCcceeEEEeccccceeEEecCCc-eeccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcC
Confidence 589999999999999999999999887755544 8899999999999999999999999999999999999999999996
Q ss_pred CC--CCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCCcccccc--CCCeeEEEEcCCCCCCcccchHHHHHHhhhcCc
Q 018172 81 SP--GGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDANTFDK--NNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEG 156 (360)
Q Consensus 81 ~~--gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~ 156 (360)
.. ....+.+|+...|.|+.|..+.+.+.-....|.-|...+.. ++.+-+-++++||||.|..-...+ +..+.
T Consensus 88 p~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~Gda~~~~~~~~~~~~IElVTSPNNPDG~lr~~V~----~g~~~ 163 (363)
T PF04864_consen 88 PNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWAGDASNFKNSDNPSPYIELVTSPNNPDGQLREAVL----NGSSG 163 (363)
T ss_dssp HHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEEEECCCGTT-S-CCGEEEEEESS-TTT------SS----TTTEE
T ss_pred CCCCCCCCCceeEecCCCccchHHHHHhccccCccccccHHhhccCCCCCCeEEEEeCCCCCcccccchhc----CCCCc
Confidence 54 44457789999999999999999888777888888777743 245667799999999998755544 43677
Q ss_pred EEEEeecccCCCCCcCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhccc
Q 018172 157 KLIHDLAYYWPQYTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIV 236 (360)
Q Consensus 157 ~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (360)
.+|.|-||.+|++.++....+.+|.++|+||.-|.+|-|+||.+.+|+++.+.+..+....+.+++.-+|..++.+|+.+
T Consensus 164 k~I~D~AYYWPhyTpI~~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v 243 (363)
T PF04864_consen 164 KVIHDLAYYWPHYTPITAPADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVV 243 (363)
T ss_dssp EEEEE-TT-STTTS---S-B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHH
T ss_pred ceeeeeeeecccccccCCCCCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999988876
Q ss_pred CCCch------hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch--HHHHHHHHh
Q 018172 237 SDDYP------NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED--EDCEKLLRA 308 (360)
Q Consensus 237 ~~~~~------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~ 308 (360)
.+.+. ...+-.++.+++|.+.|.+.+.+-..+.+++....+|.|......+.+.|.|++|+.. ++|...|++
T Consensus 244 ~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~ 323 (363)
T PF04864_consen 244 LDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLRE 323 (363)
T ss_dssp HHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHC
T ss_pred HhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcccccHHHHHHh
Confidence 54321 4788899999999999999999988899999999999999988888889999999854 799999999
Q ss_pred hCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHH
Q 018172 309 ERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAI 347 (360)
Q Consensus 309 ~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~ 347 (360)
.||..+.|..||.+..|+|+|+-.++++++.++++|..+
T Consensus 324 ~~I~tr~G~~fga~~ryVRlSml~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 324 AKIITRSGVLFGADSRYVRLSMLKRDDDFDQLLERLSKL 362 (363)
T ss_dssp TTEEEEEGGGGTS-TTEEEEESSS-HHHHHHHHHHHHCC
T ss_pred CCcccCCCCccCCCCCeEEEeccCCHHHHHHHHHHHHhh
Confidence 999999999999999999999988999999999999865
No 66
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.6e-39 Score=304.12 Aligned_cols=297 Identities=23% Similarity=0.288 Sum_probs=245.6
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. ++||++++++++.. |..+++ ++|++|+|+++++..++..++++||. |++++|+|..+..+
T Consensus 62 ~~Y~~~~g~-----~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~~~~~gd~----vl~~~p~y~~~~~~ 131 (393)
T PRK05764 62 TKYTPAAGI-----PELREAIAAKLKRDNGLDYDP-SQVIVTTGAKQALYNAFMALLDPGDE----VIIPAPYWVSYPEM 131 (393)
T ss_pred CCcCCCCCh-----HHHHHHHHHHHHHHhCCCCCH-HHEEEeCCcHHHHHHHHHHhcCCCCE----EEecCCCCcchHHH
Confidence 358888887 99999999998644 545555 58999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcc-cccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC
Q 018172 104 TDYLRSGLYKWDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY 169 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~ 169 (360)
++..|.+++.++.+.+ ++.. +++++++++++||||||.+++ +.+.++|+++++++|+|++|.+..+
T Consensus 132 ~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~ 211 (393)
T PRK05764 132 VKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVY 211 (393)
T ss_pred HHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceee
Confidence 9999999999987632 3321 357899999999999999987 3556778889999999999985321
Q ss_pred -----CcC----CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCc
Q 018172 170 -----TPI----TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 170 -----~~~----~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
.+. .+..+++++++||||.++++|+|+||+++ ++++++.+.........+.+.+.|.++..+++. .
T Consensus 212 ~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~-- 286 (393)
T PRK05764 212 DGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAG-PKELIKAMSKLQSHSTSNPTSIAQYAAVAALNG--P-- 286 (393)
T ss_pred CCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEec-CHHHHHHHHHHHhhcccCCChHHHHHHHHHHcC--C--
Confidence 122 23456899999999999999999999998 899999998887766778999999999988862 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--------h-HHHHHHHHhhCe
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--------D-EDCEKLLRAERI 311 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~l~~~gI 311 (360)
+.++++.++.++++++.+.+.|++++++.+..|.+++ |+|++++. . +....+++++||
T Consensus 287 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 353 (393)
T PRK05764 287 QDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAF-------------YVFPNVSKLLGKSITDSLEFAEALLEEAGV 353 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcce-------------EEEEecccccccccCCHHHHHHHHHHhCCE
Confidence 3889999999999999999999998666666665555 66776653 1 334455677899
Q ss_pred eeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 312 MARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 312 ~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
.++||..|+. ++++|+|++.+++++++++++|.+++.+
T Consensus 354 ~v~~g~~f~~-~~~vRis~~~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 354 AVVPGIAFGA-PGYVRLSYATSLEDLEEGLERIERFLES 391 (393)
T ss_pred EEccccccCC-CCEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 9999999976 7899999988999999999999999865
No 67
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=4.2e-39 Score=299.48 Aligned_cols=286 Identities=16% Similarity=0.167 Sum_probs=232.2
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
...|++..|. ++||++++++++. ++++|++|+|+++++.+++. +++++ ++++.|+|..+...
T Consensus 51 ~~~Y~~~~g~-----~~lr~aia~~~~~------~~~~I~it~Ga~~al~~~~~--l~~~~-----viv~~P~y~~~~~~ 112 (349)
T PRK07908 51 LAAYPSTEDE-----RRARAAVAARHGR------TPDEVLLLAGAAEGFALLAR--LRPRR-----AAVVHPSFTEPEAA 112 (349)
T ss_pred hhcCCCccch-----HHHHHHHHHHhCc------ChhhEEECCCHHHHHHHHHh--cCCCe-----EEEeCCCChHHHHH
Confidence 3458888887 9999999999875 56799999999999999888 45643 77889999999999
Q ss_pred HHHhCCeeeeecCCcc-cccc---CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCC---CCCcCC-C
Q 018172 104 TDYLRSGLYKWDGDAN-TFDK---NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWP---QYTPIT-G 174 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~~~---~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~---~~~~~~-~ 174 (360)
++..|++++.++++.+ +++. ++++++++++|||||||.+++ +++.++++ ++.++|+||+|.+. ...++. .
T Consensus 113 ~~~~G~~i~~v~~~~~~~~d~~~l~~~~~~i~l~np~NPTG~~~~~~~l~~l~~-~~~~iIvDe~y~~~~~~~~~~l~~~ 191 (349)
T PRK07908 113 LRAAGIPVHRVVLDPPFRLDPAAVPDDADLVVIGNPTNPTSVLHPAEQLLALRR-PGRILVVDEAFADAVPGEPESLAGD 191 (349)
T ss_pred HHHcCCEEEeeccCcccCcChhHhccCCCEEEEcCCCCCCCCCcCHHHHHHHHh-cCCEEEEECcchhhccCCccccccc
Confidence 9999999999988753 3332 357899999999999999999 56677887 68899999999742 222222 2
Q ss_pred CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHH
Q 018172 175 AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSER 254 (360)
Q Consensus 175 ~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 254 (360)
..+++++++||||.|+++|+|+||+++ ++++++.+.+.... ++.+.+.|.++.+++. +....++++.++.++++
T Consensus 192 ~~~~~i~i~S~SK~~~l~GlRiG~~~~-~~~~~~~~~~~~~~--~~~~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~~ 265 (349)
T PRK07908 192 DLPGVLVLRSLTKTWSLAGLRVGYALG-APDVLARLTRGRAH--WPVGTLQLEAIAACCA---PRAVAEAAADAARLAAD 265 (349)
T ss_pred cCCCEEEEeecccccCCccceeeeeec-CHHHHHHHHhcCCC--CCccHHHHHHHHHHhc---ccchHHHHHHHHHHHHH
Confidence 346789999999999999999999998 89999998876543 5566777777666655 22247889999999999
Q ss_pred HHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCC-CCCeEEEEecCC
Q 018172 255 WNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGA-DAKYARVSMLSR 333 (360)
Q Consensus 255 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~-~~~~~R~s~~~~ 333 (360)
++++.+.|+++ ++.+..|.++ +|+|+++++.+.+.+.|+++||.++||..|+. .++++|+|+ .+
T Consensus 266 r~~l~~~L~~~-~~~~~~p~~g-------------~~~~~~~~~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~-~~ 330 (349)
T PRK07908 266 RAEMVAGLRAV-GARVVDPAAA-------------PFVLVRVPDAELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV-RP 330 (349)
T ss_pred HHHHHHHHHhC-CcEeccCCCc-------------eEEEEECCcHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe-CC
Confidence 99999999988 5565555444 48999998777888899999999999999854 478999999 57
Q ss_pred hHHHHHHHHHHHHHHh
Q 018172 334 EEIFNIFLERLSAIQG 349 (360)
Q Consensus 334 ~e~~~~~~~~l~~~~~ 349 (360)
++++++++++|++++.
T Consensus 331 ~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 331 RAEVPVLVQALAEILK 346 (349)
T ss_pred CccHHHHHHHHHHHHh
Confidence 7888999999998865
No 68
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=7.4e-40 Score=305.42 Aligned_cols=279 Identities=21% Similarity=0.264 Sum_probs=229.2
Q ss_pred cccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHH
Q 018172 26 YLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETD 105 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~ 105 (360)
+|+ ..|. ++||++++++++. ++++|++|+|+++++++++..++++||+ |++++|+|+.+...++
T Consensus 60 ~Yp-~~g~-----~~Lr~aia~~~~~------~~~~I~vt~Gs~e~i~~~~~~l~~~gd~----vlv~~P~y~~~~~~~~ 123 (366)
T PRK01533 60 LYP-DGGA-----TTLRQTIANKLHV------KMEQVLCGSGLDEVIQIISRAVLKAGDN----IVTAGATFPQYRHHAI 123 (366)
T ss_pred cCC-CCCH-----HHHHHHHHHHhCC------CcceEEECCCHHHHHHHHHHHhcCCCCE----EEEcCCcHHHHHHHHH
Confidence 454 4565 9999999999975 5679999999999999999999999998 9999999999999999
Q ss_pred HhCCeeeeecCCcccccc-------CCCeeEEEEcCCCCCCcccchH-H---HHHHhhhcCcEEEEeecccCCCC-----
Q 018172 106 YLRSGLYKWDGDANTFDK-------NNGAYIEVVNSPNNPDGTIREA-V---LAKVNRSAEGKLIHDLAYYWPQY----- 169 (360)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~-------~~~~~~i~~~~p~NPtG~~~~~-~---~~~~~~~~~~~li~D~ay~~~~~----- 169 (360)
..|++++.++.+.++++. +++++++++++||||||.+++. . +.++|+++ .++|+||+|.+...
T Consensus 124 ~~g~~v~~v~~~~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~-~~~iiDe~y~~~~~~~~~~ 202 (366)
T PRK01533 124 IEGCEVKEVALNNGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISEN-TLIVIDEAYYEYVTAKDFP 202 (366)
T ss_pred HcCCEEEEeecCCCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCC-CEEEEEccHHHhhccccCc
Confidence 999999999876444432 3578999999999999999993 3 33455544 46788999974211
Q ss_pred C--cCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHH
Q 018172 170 T--PITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYG 247 (360)
Q Consensus 170 ~--~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (360)
. +.....+++++++||||+||++|+|+||+++ ++++++.+.+.+. .++.|.++|.++.++|+ +. .+.++.
T Consensus 203 ~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~-~~~~~~~l~~~~~--~~~~~~~~q~aa~~~l~---~~--~~~~~~ 274 (366)
T PRK01533 203 ETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVG-HEELIEKLNVVRL--PFNVSSLAQKAATIAFG---DD--EFIEEI 274 (366)
T ss_pred chhHHhccCCCEEEEeCchHHhcChHHHHhHHhC-CHHHHHHHHHhcC--CCCcCHHHHHHHHHHhC---CH--HHHHHH
Confidence 1 1223467899999999999999999999998 8999999988763 57899999999999886 33 888888
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEE
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYAR 327 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R 327 (360)
++.++++++++.+.++.++ +.+. .+.++|+|+++++...+.+.|.++||.+++ | ++++|
T Consensus 275 ~~~~~~~r~~~~~~l~~~g-~~~~--------------~~~~nf~~~~~~~~~~~~~~l~~~GI~Vr~---~---~~~iR 333 (366)
T PRK01533 275 VRVNTEGLRQYESFCKENE-IPFY--------------QSQTNFIFLPVENGGEIYEACAHAGFIIRP---F---PNGVR 333 (366)
T ss_pred HHHHHHHHHHHHHHHHhCC-CccC--------------CCcCcEEEEeCCCHHHHHHHHHHCCcEEcc---C---CCceE
Confidence 9999999999999998873 3322 245669999997667788888899999998 3 46899
Q ss_pred EEecCChHHHHHHHHHHHHHHhch
Q 018172 328 VSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 328 ~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
|++ .+++++++++++|+++++.+
T Consensus 334 is~-~~~~~~~~l~~al~~~~~~~ 356 (366)
T PRK01533 334 ITV-GTREQNEGVISVLQQHFENK 356 (366)
T ss_pred EeC-CCHHHHHHHHHHHHHHHHhc
Confidence 998 77888999999999998654
No 69
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=3e-39 Score=308.17 Aligned_cols=314 Identities=13% Similarity=0.134 Sum_probs=225.5
Q ss_pred cccCCCCccccccHHHHHHHH-HHHhhc-CCCCCCCC--cEEEcCChHHHHHHHHHh-----hcCCCCCCCceEEEeCCC
Q 018172 26 YLSDMGNVCWFLVPELAEAIN-NLHHVV-DNAVSDGR--HIVIGTGSTQLYQAALYA-----LSSPGGPEPISVVSAAPY 96 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la-~~~~~~-~~~~~~~~--~i~~t~G~t~~l~~~~~~-----l~~~gd~~~~~vl~~~p~ 96 (360)
.|+++.|. .++|++++ +|++.. +....+++ +|++|+|+++++..++.+ ++++||+ |+++.|+
T Consensus 123 ~Y~~p~g~-----~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~pGD~----Vlv~~P~ 193 (521)
T TIGR03801 123 NYPVPDRM-----LPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKGDK----IALMTPI 193 (521)
T ss_pred CCCCCCCC-----HHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCCCCCE----EEEeCCC
Confidence 58777776 77777777 576654 33333444 899999999999999887 7899998 9999999
Q ss_pred CCCcHHHHHHh--CCeeeeecCCcc-c-----ccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhc-
Q 018172 97 YSQYPAETDYL--RSGLYKWDGDAN-T-----FDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSA- 154 (360)
Q Consensus 97 ~~~~~~~~~~~--g~~~~~~~~~~~-~-----~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~- 154 (360)
|+.|..+++.. |.+++.++.+.+ + +.. ++++|+++++|||||||.++++ .+.++|+++
T Consensus 194 y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~ 273 (521)
T TIGR03801 194 FTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDR 273 (521)
T ss_pred cHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcC
Confidence 99999998886 667776665421 1 322 4689999999999999999993 345667765
Q ss_pred -CcEEEEeecccCCC--CCcCC-CCCCccEEEeccccccCCCCceEEEEeecCHHHHH------------HH--------
Q 018172 155 -EGKLIHDLAYYWPQ--YTPIT-GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVAR------------KM-------- 210 (360)
Q Consensus 155 -~~~li~D~ay~~~~--~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~------------~l-------- 210 (360)
+++||+||+|.+.. +.++. ...++++++.||||.|+++|||+||+++++..+.+ .+
T Consensus 274 ~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~ 353 (521)
T TIGR03801 274 PDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLT 353 (521)
T ss_pred CCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhcccc
Confidence 99999999998532 22322 23568999999999999999999999994332221 11
Q ss_pred ----------------HHHHhhccccCChHHHHHHH--HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCC
Q 018172 211 ----------------TRFIELGSIGVSKESQLRAA--KILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPE 272 (360)
Q Consensus 211 ----------------~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 272 (360)
+++....+.+.+.+.|.+++ +++..+.. .+.+.+++++.+++|++.+.+.| ... +....
T Consensus 354 ~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~-~~~y~~~~~~~~~~R~~~l~~~L-g~~-~~~~~ 430 (521)
T TIGR03801 354 TEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDK-ENAYKAETKDICRRREKLLFRGL-GLP-LQEDP 430 (521)
T ss_pred CChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHHHhc-CCC-CcCCC
Confidence 34445556778888887322 22222212 24899999999999999999998 221 22345
Q ss_pred CCCcccccccccCCCC---C-Cc-cccc--CCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHH
Q 018172 273 YPLEYCNFTGKFTNSH---P-GF-AWLE--SKEDEDCEKLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERL 344 (360)
Q Consensus 273 ~~~~~~~~~~~~~~~~---~-~~-~~~~--~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l 344 (360)
+.|++|.|.+...... + -| -|+. ..+.+++.+++.++||.+.||..|+...+++|+|++. ++++++++.++|
T Consensus 431 ~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl 510 (521)
T TIGR03801 431 NDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLANLNEYDYAEIGRAI 510 (521)
T ss_pred CCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecCCCHHHHHHHHHHH
Confidence 6777766554321110 0 00 0110 1122788889999999999999998767789999985 899999999999
Q ss_pred HHHHhch
Q 018172 345 SAIQGGS 351 (360)
Q Consensus 345 ~~~~~~~ 351 (360)
++++++.
T Consensus 511 ~~~~~~~ 517 (521)
T TIGR03801 511 RKILDEY 517 (521)
T ss_pred HHHHHHH
Confidence 9999764
No 70
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-39 Score=301.30 Aligned_cols=280 Identities=19% Similarity=0.244 Sum_probs=227.2
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|++ .|. ++||++++++++. .+++|++|+|+++++++++..++++||. |++++|+|..+...+
T Consensus 60 ~~Y~~-~~~-----~~lr~~ia~~~~~------~~~~I~it~G~~~al~~~~~~~~~~gd~----V~v~~P~y~~~~~~~ 123 (357)
T PRK14809 60 HSYPK-ASH-----ADLTAALADRWDV------SPEQVWLANGGDGALDYLARAMLDPGDT----VLVPDPGFAYYGMSA 123 (357)
T ss_pred hcCCC-CCH-----HHHHHHHHHHhCC------CcceEEECCCHHHHHHHHHHHhcCCCCE----EEEeCCChHHHHHHH
Confidence 45764 455 9999999999874 5569999999999999999999999998 999999999998888
Q ss_pred HHhCCeeeeecCCc-cccccC--------CCeeEEEEcCCCCCCcccchH-HHHH---HhhhcCcEEEEeecccCCCCC-
Q 018172 105 DYLRSGLYKWDGDA-NTFDKN--------NGAYIEVVNSPNNPDGTIREA-VLAK---VNRSAEGKLIHDLAYYWPQYT- 170 (360)
Q Consensus 105 ~~~g~~~~~~~~~~-~~~~~~--------~~~~~i~~~~p~NPtG~~~~~-~~~~---~~~~~~~~li~D~ay~~~~~~- 170 (360)
...|.+++.++++. +++..+ +++++|++++||||||.++++ .+.+ +++ ++.++|+||+|.+....
T Consensus 124 ~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~-~~~~iI~De~y~~~~~~~ 202 (357)
T PRK14809 124 RYHHGEVREYPVSKADDFEQTADTVLDAYDGERIVYLTSPHNPTGSEIPLDEVEALAERTD-EETLVVVDEAYGEFAERP 202 (357)
T ss_pred HHcCCeEEEEecccCcCCCcCHHHHHHhhcCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCc-cCcEEEEechhhhccCCc
Confidence 88999999888753 344321 368999999999999999993 3333 444 47899999999853221
Q ss_pred ---cCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHH
Q 018172 171 ---PITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYG 247 (360)
Q Consensus 171 ---~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (360)
......+++++++||||.|+++|+|+||+++ ++++++.+.+.. ..++.+.++|.++.+++. + +.++++.
T Consensus 203 ~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~a~~~l~---~--~~~~~~~ 274 (357)
T PRK14809 203 SAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVV-PEEWADAYARVN--TPFAASELACRAGLAALD---D--DEHVERT 274 (357)
T ss_pred hhHHHHhhCCCEEEEecchhHhcCcchhheeeec-CHHHHHHHHHhC--CCCCCCHHHHHHHHHHhC---C--HHHHHHH
Confidence 1123457899999999999999999999999 889999998765 356788899999988776 3 3889999
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEE
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYAR 327 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R 327 (360)
++.++++++.+.+.|.... . + +.++|+|+++++.+.+.+.|.++||.++||..|+. ++++|
T Consensus 275 ~~~~~~~r~~l~~~L~~~~---~--~-------------~~g~f~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~-~~~iR 335 (357)
T PRK14809 275 VETARWAREYIREELDAPT---W--E-------------SAGNFVLAEVGDASAVAEAAQERGVIVRDCTSFGL-PECIR 335 (357)
T ss_pred HHHHHHHHHHHHHHhcCcc---C--C-------------CCCCEEEEECCCHHHHHHHHHHCCEEEEECccCCC-CCeEE
Confidence 9999999999999986531 1 2 33458899887666666778899999999999985 67999
Q ss_pred EEecCChHHHHHHHHHHHHHHh
Q 018172 328 VSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 328 ~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
++++ +++++++++++|+++++
T Consensus 336 ls~~-~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 336 ITCG-TREETERAVEVLNEVLA 356 (357)
T ss_pred EecC-CHHHHHHHHHHHHHHhc
Confidence 9985 57899999999999875
No 71
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=4.6e-39 Score=300.33 Aligned_cols=285 Identities=20% Similarity=0.195 Sum_probs=224.2
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
...|+++. . ++||++++++++. ++++|++|+|+++++.+++..+. +||+ |++++|+|..+...
T Consensus 51 ~~~Y~~~~-~-----~~Lr~aia~~~~v------~~~~I~it~G~~~~i~~~~~~l~-~g~~----vlv~~P~y~~~~~~ 113 (360)
T PRK07392 51 LRHYPDPD-Y-----RELRLALAQHHQL------PPEWILPGNGAAELLTWAGRELA-QLRA----VYLITPAFGDYRRA 113 (360)
T ss_pred hhcCCCcC-H-----HHHHHHHHHHhCc------ChhhEEECCCHHHHHHHHHHHhC-CCCe----EEEECCCcHHHHHH
Confidence 34577654 4 8999999999964 55699999999999999998875 5777 99999999999999
Q ss_pred HHHhCCeeeeecCCccc-c-------cc----CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC-
Q 018172 104 TDYLRSGLYKWDGDANT-F-------DK----NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY- 169 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~-~-------~~----~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~- 169 (360)
++..|++++.++++.++ + .. ..++++++++|||||||.+++ +++.++++++++ +|+||+|.+...
T Consensus 114 ~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~ 192 (360)
T PRK07392 114 LRAFGATVKELPLPLDQPSPGLTLRLQTLPPQLTPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPP 192 (360)
T ss_pred HHHcCCeEEEEecccccCCcccccCHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccC
Confidence 99999999999987432 2 11 246789999999999999999 567778887774 667999985321
Q ss_pred ---Cc---CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 170 ---TP---ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 170 ---~~---~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
.+ .....+++++++||||+|+++|+|+||+++ ++++++.+.+.+ ..++.+.++|.++.++++ +. .+
T Consensus 193 ~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~-~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~---~~--~~ 264 (360)
T PRK07392 193 DAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIA-HPDRLQRWQQWR--DPWPVNGLAAAAAIAALA---DR--DF 264 (360)
T ss_pred ccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeC-CHHHHHHHHhhC--CCCCCCHHHHHHHHHHhc---cH--HH
Confidence 12 123456899999999999999999999999 888988887655 346789999999999887 32 67
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-H-HHHHHHHhhCeeeeCCCCCCC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-E-DCEKLLRAERIMARGGRRFGA 321 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~l~~~gI~~~pg~~f~~ 321 (360)
.+..++.++++++.+.+.|++++++.+. + +.++|+|++++.. . ....+++++||.++||..|+.
T Consensus 265 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~-------------~~~~fl~~~~~~~~~~l~~~ll~~~gv~v~pg~~f~~ 330 (360)
T PRK07392 265 QQQTWAWLPPAREALFQGLASLPGLTPL-P-------------SAANFLLVQSQGSALQLQEKLLQQHRILIRDCLSFPE 330 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcEEC-C-------------CCCCEEEEEcCCCHHHHHHHHHhhCCEEEEeCCCCCC
Confidence 7778888999999999999987655432 2 2345889888643 4 444556788999999999975
Q ss_pred -CCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 322 -DAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 322 -~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
.++|+||+++. +++.+++.+++.+++.
T Consensus 331 ~~~~~iRi~~~~-~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 331 LGDRYFRVAVRT-EAENQRLLEALAAILA 358 (360)
T ss_pred CCCCEEEEEeCC-HHHHHHHHHHHHHHhh
Confidence 46799999955 4445677777776654
No 72
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5e-39 Score=300.20 Aligned_cols=281 Identities=22% Similarity=0.264 Sum_probs=229.0
Q ss_pred ccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHH
Q 018172 27 LSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDY 106 (360)
Q Consensus 27 y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~ 106 (360)
|.+..|. +++|++++++++. .+++|++|+|+++++..++..++++||+ |++++|+|+.+...+..
T Consensus 60 ~~p~~g~-----~~lr~~ia~~~~~------~~~~i~~t~G~~~~l~~~~~~~~~~gd~----v~~~~p~y~~~~~~~~~ 124 (359)
T PRK03158 60 LYPDGYA-----PELRTKVAKHLGV------DEEQLLFGAGLDEVIQMISRALLNPGTN----TVMAEPTFSQYRHNAII 124 (359)
T ss_pred cCCCCcH-----HHHHHHHHHHhCC------CHHHEEECCCHHHHHHHHHHHHhCCCCE----EEEcCCCHHHHHHHHHH
Confidence 4444566 9999999999975 4569999999999999999999999998 99999999999999999
Q ss_pred hCCeeeeecCCcccccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhh--cCcEEEEeecccCCCC----Cc-
Q 018172 107 LRSGLYKWDGDANTFDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRS--AEGKLIHDLAYYWPQY----TP- 171 (360)
Q Consensus 107 ~g~~~~~~~~~~~~~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~--~~~~li~D~ay~~~~~----~~- 171 (360)
.|++++.++.+..+++. +++++++++++||||||.+++ +++.++++. +++++|+||+|.+..+ ++
T Consensus 125 ~g~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 204 (359)
T PRK03158 125 EGAEVREVPLKDGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDT 204 (359)
T ss_pred cCCeEEEEecCCCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccH
Confidence 99999999876333321 367899999999999999999 445555443 6999999999974221 11
Q ss_pred --CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHH
Q 018172 172 --ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRR 249 (360)
Q Consensus 172 --~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 249 (360)
..+..+++++++||||+||++|+|+||+++ ++++++.+.+... .++.|.++|.++.++++ +. .++++.++
T Consensus 205 ~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~-~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~---~~--~~~~~~~~ 276 (359)
T PRK03158 205 LPLLEKYENLIVLRTFSKAYGLAALRVGYGIA-SEELIEKLNIARP--PFNTTRIAQYAAIAALE---DQ--AFLKECVE 276 (359)
T ss_pred HHHHHhcCCEEEEEechHhhcCcchhhehhcC-CHHHHHHHHHhcC--CCCCCHHHHHHHHHHhc---CH--HHHHHHHH
Confidence 123457899999999999999999999998 8999999987764 46789999999999886 32 78888889
Q ss_pred HHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-hHHHHHHHHhhCeeeeCCCCCCCCCCeEEE
Q 018172 250 LMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-DEDCEKLLRAERIMARGGRRFGADAKYARV 328 (360)
Q Consensus 250 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~ 328 (360)
.++++++.+.+.|+++ ++.+. + +.++|+|++++. ...+.+.|.++||.++||..|+. ++++||
T Consensus 277 ~~~~~~~~~~~~l~~~-~~~~~-~-------------~~g~~i~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~-~~~iRi 340 (359)
T PRK03158 277 KNAEGLEQYYAFCKEY-GLFYY-P-------------SQTNFIFVDTGRDANELFEALLKKGYIVRSGAALGF-PTGVRI 340 (359)
T ss_pred HHHHHHHHHHHHHHHC-CCeeC-C-------------CcCcEEEEECCCCHHHHHHHHHHCCeEEeeCCCCCC-CCeEEE
Confidence 9999999999999887 33332 2 234488888863 36666777789999999999974 789999
Q ss_pred EecCChHHHHHHHHHHHHH
Q 018172 329 SMLSREEIFNIFLERLSAI 347 (360)
Q Consensus 329 s~~~~~e~~~~~~~~l~~~ 347 (360)
++ .+++++++++++|+++
T Consensus 341 ~~-~~~~~~~~l~~al~~~ 358 (359)
T PRK03158 341 TI-GLKEQNDKIIELLKEL 358 (359)
T ss_pred ec-CCHHHHHHHHHHHHHh
Confidence 98 4788899999999886
No 73
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-39 Score=303.47 Aligned_cols=292 Identities=15% Similarity=0.130 Sum_probs=223.6
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcC-CCCCCCCcEE--EcCChHHHHHHHHH---hhcCCCCCCCceEEEeCCCC
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVD-NAVSDGRHIV--IGTGSTQLYQAALY---ALSSPGGPEPISVVSAAPYY 97 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~-~~~~~~~~i~--~t~G~t~~l~~~~~---~l~~~gd~~~~~vl~~~p~~ 97 (360)
...|+++.|. ++||+++++++...+ ..+++ ++|+ .|.|+++++..++. .++++||+ |++++|+|
T Consensus 65 ~~~Y~~~~G~-----~~lR~aia~~~~~~~~~~~~~-~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~----Vlv~~P~y 134 (404)
T PTZ00376 65 DKEYLPIEGL-----QSFIEAAQKLLFGEASYALAE-KRIATVQALSGTGALRLGFEFLKRFLPAGTT----VYVSNPTW 134 (404)
T ss_pred CCCCCCCCCC-----HHHHHHHHHHhcCCCcccccc-CeEEEeeccCcchHHHHHHHHHHHhcCCCCE----EEEcCCCc
Confidence 4679999998 999999999875433 34455 4788 59999999988865 66899998 99999999
Q ss_pred CCcHHHHHHhCCeeeeecCCc---ccccc----------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEE
Q 018172 98 SQYPAETDYLRSGLYKWDGDA---NTFDK----------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIH 160 (360)
Q Consensus 98 ~~~~~~~~~~g~~~~~~~~~~---~~~~~----------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~ 160 (360)
+.+..+++..|++++.+++.. .+++. .++++++++++||||||.++++ .+.++|+++++++|+
T Consensus 135 ~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~ 214 (404)
T PTZ00376 135 PNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFF 214 (404)
T ss_pred hhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEE
Confidence 999999999999999998732 22221 1346778889999999999993 455678889999999
Q ss_pred eecccCCCCCc-------C---CCCCCccEEEeccccccCCCCceEEEE---eecCHHHHHHH----HHHHhhccccCCh
Q 018172 161 DLAYYWPQYTP-------I---TGAADHDIMLFTLSKCTGHAGSRIGWA---LVKDTEVARKM----TRFIELGSIGVSK 223 (360)
Q Consensus 161 D~ay~~~~~~~-------~---~~~~~~~i~~~S~sK~~~~~G~r~G~~---~~~~~~~~~~l----~~~~~~~~~~~~~ 223 (360)
||+|.+..+.. . ....+++++++||||+|+++|+|+||+ ++ ++++++.+ .+.......+.+.
T Consensus 215 De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~ 293 (404)
T PTZ00376 215 DMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCA-NKEEAANVLSQLKLIIRPMYSSPPI 293 (404)
T ss_pred ehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeC-CHHHHHHHHHHHHHHHhhhcCCCch
Confidence 99998533211 1 123458999999999999999999998 45 77755544 3333333345678
Q ss_pred HHHHHHHHHhcccC--CCchhHHHHHHHHHHHHHHHHHHHHHhcCC---cccCCCCCcccccccccCCCCCCcccccCCc
Q 018172 224 ESQLRAAKILGIVS--DDYPNFFEYGRRLMSERWNMLRQVIRQSGV---FGLPEYPLEYCNFTGKFTNSHPGFAWLESKE 298 (360)
Q Consensus 224 ~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (360)
++|.++..+++... +.+.+++.+.+++++++++.+.+.|++++. +.+..|.|++ |+|++++.
T Consensus 294 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~-------------f~~~~~~~ 360 (404)
T PTZ00376 294 HGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGM-------------FSFTGLTK 360 (404)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceE-------------EEecCCCH
Confidence 99999999887210 111244667788999999999999998841 2334455555 88988854
Q ss_pred hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec-CChHHHHHHHHHHHHHHh
Q 018172 299 DEDCEKLLRAERIMARGGRRFGADAKYARVSML-SREEIFNIFLERLSAIQG 349 (360)
Q Consensus 299 ~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~-~~~e~~~~~~~~l~~~~~ 349 (360)
+++..+++++||.+.|| + |++++ .+++++++++++|+++++
T Consensus 361 -~~~~~L~~~~~v~v~p~-------~--Ris~~~~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 361 -EQVERLIEKYHIYLLDN-------G--RISVAGLTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred -HHHHHHHHhCCEeecCC-------C--eEEEeccCHHhHHHHHHHHHHHHh
Confidence 67777777779999996 1 99997 499999999999999875
No 74
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-38 Score=296.47 Aligned_cols=284 Identities=19% Similarity=0.249 Sum_probs=228.9
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
+.|++.. . ++||++++++++. ++++|++|+|+++++..++..++++||+ |+++.|+|..+...+
T Consensus 54 ~~y~~~~-~-----~~lr~~ia~~~~~------~~~~i~it~G~~~~l~~~~~~l~~~gd~----Vlv~~p~y~~~~~~~ 117 (351)
T PRK14807 54 NIYPDPT-A-----EKLREELARYCSV------VPTNIFVGNGSDEIIHLIMLAFINKGDV----VIYPHPSFAMYSVYS 117 (351)
T ss_pred cCCCCcc-H-----HHHHHHHHHHhCC------CcccEEEecCHHHHHHHHHHHhcCCCCE----EEEeCCChHHHHHHH
Confidence 4566443 4 8999999999875 5569999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecCCcc-cccc--------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC---CCc
Q 018172 105 DYLRSGLYKWDGDAN-TFDK--------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ---YTP 171 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~-~~~~--------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~---~~~ 171 (360)
+..|++++.++.+.+ +++. ..++++|++++||||||.+++ +.+.+++++++.++|+||+|.+.. ..+
T Consensus 118 ~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~ 197 (351)
T PRK14807 118 KIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVD 197 (351)
T ss_pred HHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHH
Confidence 999999999987643 2322 237899999999999999999 567777777788899999997421 122
Q ss_pred CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 172 ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 172 ~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
.....+++++++||||.|++||+|+||+++ ++++++.+...+. ..+.+.+.|.++..+++ + .++++..+.+
T Consensus 198 ~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~-~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~---~---~~~~~~~~~~ 268 (351)
T PRK14807 198 VINEFENLIVLRTLSKAFGLAGLRVGYAVA-NENILKYLNLVKS--PYNINSLSQVIALKVLR---T---GVLKERVNYI 268 (351)
T ss_pred HhhhCCCEEEEecchHhcccchhceeeeec-CHHHHHHHHHccC--CCCcCHHHHHHHHHHHh---H---HHHHHHHHHH
Confidence 234567899999999999999999999998 8999999987654 35678899999988886 2 5677777888
Q ss_pred HHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec
Q 018172 252 SERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYARVSML 331 (360)
Q Consensus 252 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~ 331 (360)
+++++.+.+.|++++++.+. + +.++|+|+++++.+.+.+.|.++||.++++..+...++++||+++
T Consensus 269 ~~~r~~l~~~l~~~~g~~~~-~-------------~~~~~~~i~~~~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~ 334 (351)
T PRK14807 269 LNERERLIKELSKIPGIKVY-P-------------SKTNFILVKFKDADYVYQGLLERGILVRDFSKVEGLEGALRITVS 334 (351)
T ss_pred HHHHHHHHHHHHhCCCcEEC-c-------------CCccEEEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC
Confidence 99999999999877555442 2 234488999987777888888999999986543224679999994
Q ss_pred CChHHHHHHHHHHHHHH
Q 018172 332 SREEIFNIFLERLSAIQ 348 (360)
Q Consensus 332 ~~~e~~~~~~~~l~~~~ 348 (360)
.+++.++++++|++++
T Consensus 335 -~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 335 -SCEANDYLINGLKELL 350 (351)
T ss_pred -CHHHHHHHHHHHHHhh
Confidence 5677899999998764
No 75
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.3e-38 Score=292.57 Aligned_cols=271 Identities=20% Similarity=0.230 Sum_probs=219.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCCc
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDA 118 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 118 (360)
.+||++++++++. .++++|++|+|+++++..+.. ++++|+ |+++.|+|+.|...++..|++++.++.+.
T Consensus 56 ~~L~~~ia~~~~~-----~~~~~I~i~~Gs~e~i~~l~~-~~~~g~-----v~v~~P~y~~y~~~~~~~g~~~~~v~~~~ 124 (339)
T PRK06959 56 DGLAACAARYYGA-----PDAAHVLPVAGSQAAIRALPA-LLPRGR-----VGIAPLAYSEYAPAFARHGHRVVPLDEAA 124 (339)
T ss_pred HHHHHHHHHHhCC-----CCcccEEECcCHHHHHHHHHH-hcCCCe-----EEEcCCCcHHHHHHHHHCCCEEEeecccc
Confidence 7999999999986 134699999999999987654 567664 88899999999999999999999998765
Q ss_pred cccccCCCeeEEEEcCCCCCCcccchH-HHHH---HhhhcCcEEEEeecccCCCC-CcCCC--CCCccEEEeccccccCC
Q 018172 119 NTFDKNNGAYIEVVNSPNNPDGTIREA-VLAK---VNRSAEGKLIHDLAYYWPQY-TPITG--AADHDIMLFTLSKCTGH 191 (360)
Q Consensus 119 ~~~~~~~~~~~i~~~~p~NPtG~~~~~-~~~~---~~~~~~~~li~D~ay~~~~~-~~~~~--~~~~~i~~~S~sK~~~~ 191 (360)
+.+ ...+++++++|||||||.++++ .+.+ .+++++.++|+||+|.+... +++.. ..+++++++||||+||+
T Consensus 125 ~~~--~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl 202 (339)
T PRK06959 125 DTL--PAALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGL 202 (339)
T ss_pred hhc--cccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCC
Confidence 332 2346799999999999999993 3333 34457999999999996432 22221 34679999999999999
Q ss_pred CCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccC
Q 018172 192 AGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLP 271 (360)
Q Consensus 192 ~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 271 (360)
+|+|+||+++ ++++++.+.+.+. .++.+.++|.++.++++ +. .+.++.++.++++|+++.+.|++++ +.+.
T Consensus 203 ~GlRiGy~v~-~~~li~~l~~~~~--~~~vs~~~q~a~~~~L~---~~--~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~ 273 (339)
T PRK06959 203 AGVRAGFVLA-APALLAALRDALG--AWTVSGPARHAVRAAFA---DA--AWQAAMRERLAADGARLAALLRAHG-FAVH 273 (339)
T ss_pred cchheEEEec-CHHHHHHHHHhcC--CCCCcHHHHHHHHHHhC---cH--HHHHHHHHHHHHHHHHHHHHHHHCC-CCcc
Confidence 9999999999 8999999998764 45678899999999887 33 7888999999999999999999984 3321
Q ss_pred CCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 272 EYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
+.++|+|+++++...+.+.|.++||.+++ |+. .+++||++..+++++++++++|++++..
T Consensus 274 ---------------~~~~f~~~~~~~~~~l~~~l~~~GI~vr~---~~~-~~~lRisi~~~~~e~~~l~~al~~~~~~ 333 (339)
T PRK06959 274 ---------------ATPLFSWTDDPRAAALHAALARRGIWTRY---FAP-PPSVRFGLPADEAEWQRLEDALAECVPT 333 (339)
T ss_pred ---------------CcceEEEEeCCCHHHHHHHHHhCCeEEEE---CCC-CCeEEEECCCCHHHHHHHHHHHHHHHHH
Confidence 12358899987657788888999999985 443 5699999966888999999999987754
No 76
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=1.3e-38 Score=300.86 Aligned_cols=292 Identities=18% Similarity=0.187 Sum_probs=226.7
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCCC-CCCCCcE--EEcCChHHHHHHHHHhh--cCCCCCCCceEEEeCCCCC
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDNA-VSDGRHI--VIGTGSTQLYQAALYAL--SSPGGPEPISVVSAAPYYS 98 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~-~~~~~~i--~~t~G~t~~l~~~~~~l--~~~gd~~~~~vl~~~p~~~ 98 (360)
...|++..|. ++||+++++++...+.. +++ ++| ++|+|+++++.+++..+ +++||+ |++++|+|+
T Consensus 62 ~~~Y~~~~G~-----~~lR~aia~~~~~~~~~~~~~-~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~----Vlv~~P~y~ 131 (396)
T PRK09257 62 TKNYLPIEGL-----AAYRQAVQELLFGADSPALAA-GRVATVQTPGGTGALRVGADFLKRAFPDAK----VWVSDPTWP 131 (396)
T ss_pred CCCcCCCCCC-----HHHHHHHHHHhcCCCCccccc-CeEEEEecCCccHHHHHHHHHHHHhCCCCe----EEECCCCcc
Confidence 3469999998 99999999997655544 354 466 99999999999998766 589998 999999999
Q ss_pred CcHHHHHHhCCeeeeecC-Cc--ccccc----------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEe
Q 018172 99 QYPAETDYLRSGLYKWDG-DA--NTFDK----------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHD 161 (360)
Q Consensus 99 ~~~~~~~~~g~~~~~~~~-~~--~~~~~----------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D 161 (360)
.+..+++..|++++.++. +. .+++. .++++++++++||||||.++++ .+.++|+++++++|+|
T Consensus 132 ~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~D 211 (396)
T PRK09257 132 NHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLD 211 (396)
T ss_pred cHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEe
Confidence 999999999999999986 22 23332 1335677779999999999993 4567788899999999
Q ss_pred ecccCCCCC------cC---CCCCCccEEEeccccccCCCCceEEEEee--cCHH----HHHHHHHHHhhccccCChHHH
Q 018172 162 LAYYWPQYT------PI---TGAADHDIMLFTLSKCTGHAGSRIGWALV--KDTE----VARKMTRFIELGSIGVSKESQ 226 (360)
Q Consensus 162 ~ay~~~~~~------~~---~~~~~~~i~~~S~sK~~~~~G~r~G~~~~--~~~~----~~~~l~~~~~~~~~~~~~~~~ 226 (360)
|+|.+..+. ++ ....+++++++||||+|+++|+|+||+++ ++++ +.+.+.........+++.+.|
T Consensus 212 e~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q 291 (396)
T PRK09257 212 IAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGA 291 (396)
T ss_pred ccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHH
Confidence 999853321 11 12356899999999999999999999973 3444 344444444444556788999
Q ss_pred HHHHHHhcccC--CCchhHHHHHHHHHHHHHHHHHHHHHhcC---CcccCCCCCcccccccccCCCCCCcccccCCchHH
Q 018172 227 LRAAKILGIVS--DDYPNFFEYGRRLMSERWNMLRQVIRQSG---VFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDED 301 (360)
Q Consensus 227 ~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (360)
.++.+++.... +.++++++++++.++++++.+.+.|+++. .+.+..|.|++ |+|+++++ ++
T Consensus 292 ~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~-------------~~w~~l~~-~~ 357 (396)
T PRK09257 292 AIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGM-------------FSYSGLTP-EQ 357 (396)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceE-------------EEecCCCH-HH
Confidence 99988886310 11347888999999999999999999884 25555666666 88998864 67
Q ss_pred HHHHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHH
Q 018172 302 CEKLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQ 348 (360)
Q Consensus 302 ~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~ 348 (360)
+.+++.++||.+.|. + ||+++. +++++++++++|++++
T Consensus 358 ~~~l~~~~~V~~~p~-------~--ri~~~~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 358 VDRLREEFGVYAVGS-------G--RINVAGLNESNIDYVAEAIAAVL 396 (396)
T ss_pred HHHHHHcCCEEEcCC-------C--eEEEeeCCHHHHHHHHHHHHhhC
Confidence 788889999999872 2 999975 9999999999998753
No 77
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-39 Score=300.32 Aligned_cols=277 Identities=18% Similarity=0.209 Sum_probs=221.9
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCC-CCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPG-GPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG 116 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~g-d~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 116 (360)
..+|++++++++|. ++++|++|+|+++++.+++..++++| |+ |+++.|+|..|...++..|++++.++.
T Consensus 59 ~~~l~~~~a~~~g~------~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~----vli~~P~y~~y~~~~~~~G~~~~~v~~ 128 (351)
T PRK01688 59 PKAVIENYAAYAGV------KPEQVLVSRGADEGIELLIRAFCEPGKDA----ILYCPPTYGMYSVSAETIGVEIRTVPT 128 (351)
T ss_pred hHHHHHHHHHHhCC------CHHHEEEcCCHHHHHHHHHHHhcCCCCCE----EEEcCCCHHHHHHHHHHcCCEEEEeec
Confidence 48999999999986 56799999999999999999999887 77 999999999999999999999999887
Q ss_pred Ccc-cccc------CCCeeEEEEcCCCCCCcccch-HHHHH---HhhhcCcEEEEeecccCCCCC----cCCCCCCccEE
Q 018172 117 DAN-TFDK------NNGAYIEVVNSPNNPDGTIRE-AVLAK---VNRSAEGKLIHDLAYYWPQYT----PITGAADHDIM 181 (360)
Q Consensus 117 ~~~-~~~~------~~~~~~i~~~~p~NPtG~~~~-~~~~~---~~~~~~~~li~D~ay~~~~~~----~~~~~~~~~i~ 181 (360)
+.+ .++. -+++++|+++|||||||..++ +.+.+ .|+ .+.++|+||+|.+.... ......+++++
T Consensus 129 ~~~~~~d~~~l~~~~~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~-~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv 207 (351)
T PRK01688 129 LDNWQLDLPAIADNLDGVKVVYVCSPNNPTGNLINPQDLRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLVI 207 (351)
T ss_pred CCCCCCCHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchhhcCCCCChHHHHhhCCCEEE
Confidence 543 1211 147899999999999999998 34333 344 36899999999864321 12245678999
Q ss_pred EeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHH
Q 018172 182 LFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQV 261 (360)
Q Consensus 182 ~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 261 (360)
+.||||+||++|+|+||+++ ++++++.+.+... .++.+.+.|.++.++|. +...+++++.++.++++|+++.+.
T Consensus 208 ~rSfSK~~glaGlRiGy~i~-~~~~i~~l~~~~~--~~~v~~~~~~~a~~~L~---~~~~~~~~~~~~~~~~~r~~l~~~ 281 (351)
T PRK01688 208 LRTLSKAFALAGLRCGFTLA-NEEVINLLLKVIA--PYPLSTPVADIAAQALS---PQGIAAMRERVAEINANRQWLIAA 281 (351)
T ss_pred EecchHhhcCHHHHHhHHhC-CHHHHHHHHhccC--CCCCCHHHHHHHHHHHh---cchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998 8999999987754 45677888888888776 221267888889999999999999
Q ss_pred HHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHH
Q 018172 262 IRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFL 341 (360)
Q Consensus 262 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~ 341 (360)
|++++++....| +.++|+|+++++.+.+.+.|.++||.++++..+...++++|+|+ .++|++++++
T Consensus 282 L~~~~~~~~~~p-------------s~~nfi~~~~~~~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~-~~~~e~~~l~ 347 (351)
T PRK01688 282 LKEIPCVEQVFD-------------SETNYILARFTASSAVFKSLWDQGIILRDQNKQPGLSNCLRITI-GTREECQRVI 347 (351)
T ss_pred HHhCCCCCeECC-------------CCCcEEEEEcCCHHHHHHHHHHCCeEEEECCCcCCCCCeEEEeC-CCHHHHHHHH
Confidence 998865432223 44568999987667777888899999998765532367999998 4778999999
Q ss_pred HHHH
Q 018172 342 ERLS 345 (360)
Q Consensus 342 ~~l~ 345 (360)
++|+
T Consensus 348 ~al~ 351 (351)
T PRK01688 348 DALR 351 (351)
T ss_pred HhhC
Confidence 8873
No 78
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.4e-39 Score=298.21 Aligned_cols=284 Identities=19% Similarity=0.238 Sum_probs=226.4
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCC-CCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPG-GPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~g-d~~~~~vl~~~p~~~~~~~~ 103 (360)
++|++.. . ++||++++++++. ++++|++|+|+++++++++.+++++| |+ |+++.|+|+.|...
T Consensus 55 ~~Yp~~~-~-----~~Lr~aia~~~~~------~~~~I~it~Gs~~~i~~~~~~~~~~g~d~----vlv~~P~y~~y~~~ 118 (354)
T PRK04635 55 NRYPECQ-P-----PELINAYSAYAGV------APEQILTSRGADEAIELLIRAFCEPGQDS----IACFGPTYGMYAIS 118 (354)
T ss_pred ccCCCCC-H-----HHHHHHHHHHhCc------CHHHEEEeCCHHHHHHHHHHHhcCCCCCe----EEEcCCChHHHHHH
Confidence 4466543 3 9999999999986 66799999999999999999999988 77 99999999999999
Q ss_pred HHHhCCeeeeecCCcc-cccc-----CCCeeEEEEcCCCCCCcccch-HHHHHHhhh-cCcEEEEeecccCCCC----Cc
Q 018172 104 TDYLRSGLYKWDGDAN-TFDK-----NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRS-AEGKLIHDLAYYWPQY----TP 171 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~~~-----~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~-~~~~li~D~ay~~~~~----~~ 171 (360)
++..|++++.++++.+ .++. .+++++|++++||||||.+++ +.+.++++. .++++|+||+|.+... ..
T Consensus 119 ~~~~g~~v~~v~~~~~~~~~~~~l~~~~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~ 198 (354)
T PRK04635 119 AETFNVGVKALPLTADYQLPLDYIEQLDGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVAD 198 (354)
T ss_pred HHHcCCEEEEEecCCCCCCCHHHHHhccCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHH
Confidence 9999999999987643 2211 257899999999999999999 455555543 3699999999985321 12
Q ss_pred CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 172 ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 172 ~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
+....++++++.||||+||++|+|+||+++ ++++++.+.+... .++.+.+.|.++.+++.. .. ..++++.++.+
T Consensus 199 ~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~-~~~~~~~l~~~~~--~~~~~~~~~~~a~~~l~~--~~-~~~~~~~~~~~ 272 (354)
T PRK04635 199 LLASYPNLVVLRTLSKAFALAGARCGFTLA-NEELIEILMRVIA--PYPVPLPVSEIATQALSE--AG-LARMKFQVLDL 272 (354)
T ss_pred HHhhCCCEEEEechHHHhhhhHHHHhhhhC-CHHHHHHHHhhcC--CCCCCHHHHHHHHHHHhc--cc-HHHHHHHHHHH
Confidence 223457889999999999999999999998 8999999886543 467788888888887762 21 25677788889
Q ss_pred HHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec
Q 018172 252 SERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYARVSML 331 (360)
Q Consensus 252 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~ 331 (360)
+++++.+.+.|++++++.+.. +.++|+|+++++.+.+.+.|.++||.++++..++ .++++|+|+
T Consensus 273 ~~~r~~l~~~L~~~~~~~~~~--------------~~g~f~~~~~~~~~~~~~~l~~~gv~v~~~~~~~-~~~~lRis~- 336 (354)
T PRK04635 273 NAQGARLQAALSMYGGAKVLE--------------GNGNYVLAKFDDVDAVFKALWDAGIVARAYKDPR-LANCIRFSF- 336 (354)
T ss_pred HHHHHHHHHHHHhCCCceECC--------------CCCcEEEEECCCHHHHHHHHHHCCEEEEECCCCC-CCCeEEEEe-
Confidence 999999999999986444332 2344889988766777888899999999764433 367999998
Q ss_pred CChHHHHHHHHHHHH
Q 018172 332 SREEIFNIFLERLSA 346 (360)
Q Consensus 332 ~~~e~~~~~~~~l~~ 346 (360)
.++|++++++++|++
T Consensus 337 ~~~e~~~~l~~al~~ 351 (354)
T PRK04635 337 SNRAETDKLIGLIRN 351 (354)
T ss_pred CCHHHHHHHHHHHHH
Confidence 578899999999975
No 79
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-38 Score=296.05 Aligned_cols=286 Identities=21% Similarity=0.240 Sum_probs=221.3
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhc---CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCC-CCCceEEEeCCCCCCc
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVV---DNAVSDGRHIVIGTGSTQLYQAALYALSSPGG-PEPISVVSAAPYYSQY 100 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~---~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd-~~~~~vl~~~p~~~~~ 100 (360)
++|++ .|. ++||++++++++.+ +..+++ ++|++|+|+++++..++.+++.+|+ . |++++|+|..+
T Consensus 61 ~~Y~~-~G~-----~~Lr~aia~~~~~~~~~~~~v~~-~~I~it~Ga~~al~~~~~~~~~~g~~~----Vlv~~P~y~~~ 129 (374)
T PRK02610 61 NRYPD-GGH-----EALKQAIAEYVNESAAGSSQITP-ANISVGNGSDELIRSLLIATCLGGEGS----ILVAEPTFSMY 129 (374)
T ss_pred cCCCC-Cch-----HHHHHHHHHHhCccccccCCCCH-HHEEEcCChHHHHHHHHHHHcCCCCCe----EEEcCCChHHH
Confidence 35654 566 99999999998754 455666 4899999999999988888877776 6 99999999999
Q ss_pred HHHHHHhCCeeeeecCCcc--cccc--------C---CCeeEEEEcCCCCCCcccchH-HHHHHhh-hcCcEEEEeeccc
Q 018172 101 PAETDYLRSGLYKWDGDAN--TFDK--------N---NGAYIEVVNSPNNPDGTIREA-VLAKVNR-SAEGKLIHDLAYY 165 (360)
Q Consensus 101 ~~~~~~~g~~~~~~~~~~~--~~~~--------~---~~~~~i~~~~p~NPtG~~~~~-~~~~~~~-~~~~~li~D~ay~ 165 (360)
..+++..|++++.++.+.+ +++. . .++++|++++||||||.++++ .+.++.+ .+++++|+||+|.
T Consensus 130 ~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~ 209 (374)
T PRK02610 130 GILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYF 209 (374)
T ss_pred HHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEecccc
Confidence 9999999999999987643 3321 1 478999999999999999994 3333332 1589999999998
Q ss_pred CCCCCc---CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchh
Q 018172 166 WPQYTP---ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 166 ~~~~~~---~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
+....+ ......++++++||||+||+||+|+||+++ ++++++.+.+.+. .++.+.+.|.++..+++.. +.
T Consensus 210 ~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~-~~~l~~~l~~~~~--~~~~~~~~q~a~~~~l~~~----~~ 282 (374)
T PRK02610 210 EFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIG-HPELIAVLEKVRL--PYNLPSFSQLAAQLALEHR----QE 282 (374)
T ss_pred ccCccchHHHHhcCCCEEEEEecchhccCcccceeeeec-CHHHHHHHHHhcC--CCCCCHHHHHHHHHHhcCH----HH
Confidence 542211 112345788999999999999999999998 8999999988763 4677889999998888621 36
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCC
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRF 319 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f 319 (360)
+.+.+++.+++ ++.+.+.|+.++++.+ .|.+ ++|+|++++.. .++.+.|.++||.++++
T Consensus 283 ~~~~~~~~~~~-r~~l~~~L~~~~~~~~-~p~~-------------g~f~~~~l~~~~~~~~~~~~l~~~gi~v~~~--- 344 (374)
T PRK02610 283 LLAAIPEILQE-RDRLYQALQELPQLRV-WPSA-------------ANFLYLRLSQDAALAALHQALKAQGTLVRHT--- 344 (374)
T ss_pred HHHHHHHHHHH-HHHHHHHHHhCCCcEe-CCCc-------------ceEEEEeCCCCCCHHHHHHHHHHCCEEEEeC---
Confidence 66666666554 7778899988755443 2433 34889998742 66777788999999863
Q ss_pred CCCCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 320 GADAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 320 ~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
.+++|||++. ++++++++++|++++..
T Consensus 345 ---~~~lRls~~~-~~~~~~~l~~l~~~l~~ 371 (374)
T PRK02610 345 ---GGGLRITIGT-PEENQRTLERLQAALTQ 371 (374)
T ss_pred ---CCeEEEeCCC-HHHHHHHHHHHHHHHhh
Confidence 4689999964 56789999999998753
No 80
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-38 Score=297.98 Aligned_cols=274 Identities=20% Similarity=0.262 Sum_probs=224.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCCc
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDA 118 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 118 (360)
++||++++++++. ++++|++|+|+++++..++..++++||+ |++++|+|+.|...++..|++++.++.+.
T Consensus 89 ~~lr~~ia~~~~~------~~~~I~~t~Ga~~~i~~~~~~~~~~gd~----Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~ 158 (380)
T PLN03026 89 RRLRAALAEDSGL------ESENILVGCGADELIDLLMRCVLDPGDK----IIDCPPTFGMYVFDAAVNGAEVIKVPRTP 158 (380)
T ss_pred HHHHHHHHHHhCc------ChhhEEEcCCHHHHHHHHHHHhcCCCCE----EEEcCCChHHHHHHHHHcCCEEEEeecCC
Confidence 8999999999985 5569999999999999999999999998 99999999999999999999999988753
Q ss_pred c-c-----ccc---CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC----CcCCCCCCccEEEec
Q 018172 119 N-T-----FDK---NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY----TPITGAADHDIMLFT 184 (360)
Q Consensus 119 ~-~-----~~~---~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~----~~~~~~~~~~i~~~S 184 (360)
+ . +.. ++++++|++++||||||.+++ +.+.++++ ..+++|+||+|.+... .......+++++++|
T Consensus 159 ~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~-~~~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~S 237 (380)
T PLN03026 159 DFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILE-LPILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRT 237 (380)
T ss_pred CCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECcchhhcCCcchHHHHHhCCCEEEEec
Confidence 2 2 211 467899999999999999999 56677776 3489999999985321 112235678999999
Q ss_pred cccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 018172 185 LSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQ 264 (360)
Q Consensus 185 ~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 264 (360)
|||+||++|+|+||+++ ++++++.+.+.+. .++.+.++|.++.++|+ +. .++++.++.++++|+.+.+.|++
T Consensus 238 fSK~~glaGlRiGy~~~-~~~~i~~l~~~~~--~~~~~~~~q~aa~~aL~---~~--~~~~~~~~~~~~~r~~l~~~L~~ 309 (380)
T PLN03026 238 FSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ--PYNVSVAAEVAACAALS---NP--KYLEDVKNALVEERERLFGLLKE 309 (380)
T ss_pred chHhhcCccccceeeec-CHHHHHHHHHhcC--CCCCCHHHHHHHHHHhh---CH--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 8999999987764 46788899999998886 32 78999999999999999999999
Q ss_pred cCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHH
Q 018172 265 SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFL 341 (360)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~ 341 (360)
+++..+ .| +.++|+|+++++ ...+.+.|.++||.++++..++ .++++|||++ +++++++++
T Consensus 310 ~~~~~~-~p-------------~~~~f~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~-~~~~lRis~~-~~~~~~~l~ 373 (380)
T PLN03026 310 VPFLEP-YP-------------SDANFILCRVTSGRDAKKLKEDLAKMGVMVRHYNSKE-LKGYIRVSVG-KPEHTDALM 373 (380)
T ss_pred CCCCeE-CC-------------CCCeEEEEECCCCCCHHHHHHHHHHCCeEEEECCCCC-CCCEEEEecC-CHHHHHHHH
Confidence 865432 23 334588998873 3667777779999999987654 3679999995 667888999
Q ss_pred HHHHHH
Q 018172 342 ERLSAI 347 (360)
Q Consensus 342 ~~l~~~ 347 (360)
++|+++
T Consensus 374 ~al~~~ 379 (380)
T PLN03026 374 EALKQL 379 (380)
T ss_pred HHHHHh
Confidence 888764
No 81
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-38 Score=296.67 Aligned_cols=287 Identities=20% Similarity=0.263 Sum_probs=228.8
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..+|++. |. ++||++++++++. ++++|++|+|+++++++++..++++||+ |++++|+|+.+...
T Consensus 54 ~~~y~~~-~~-----~~lr~aia~~~~~------~~~~I~it~G~~~al~~~~~~l~~~gd~----vlv~~P~y~~~~~~ 117 (353)
T PRK05387 54 LRLYPDP-NA-----DALRQAIAAYYGL------DPEQVFVGNGSDEVLAHAFLAFFNHDRP----LLFPDITYSFYPVY 117 (353)
T ss_pred hhcCCCC-cH-----HHHHHHHHHHhCC------CHHHEEEcCCHHHHHHHHHHHhcCCCCE----EEEeCCCHHHHHHH
Confidence 3457654 44 8999999999974 5579999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcc-cccc---CCCeeEEEEcCCCCCCcccch-HHHHHHhhh-cCcEEEEeecccCCCC---CcCCC
Q 018172 104 TDYLRSGLYKWDGDAN-TFDK---NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRS-AEGKLIHDLAYYWPQY---TPITG 174 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~~~---~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~-~~~~li~D~ay~~~~~---~~~~~ 174 (360)
++..|++++.++.+.+ +++. ..+++++++++||||||.+++ +.+.++++. +++++|+||+|.+... .+...
T Consensus 118 ~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~ 197 (353)
T PRK05387 118 AGLYGIPYEEIPLDDDFSIDVEDYLRPNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLID 197 (353)
T ss_pred HHHcCCEEEEeecCCCCCCCHHHHHhcCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHh
Confidence 9999999999987643 2332 135688999999999999999 455566554 3999999999974321 22234
Q ss_pred CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhh-ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHH
Q 018172 175 AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIEL-GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSE 253 (360)
Q Consensus 175 ~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 253 (360)
..+++++++||||.|+++|+|+||+++ ++++++.+.+.+.. ..++.+.+.|.++.+++. +. .++++.++++.+
T Consensus 198 ~~~~~i~~~S~SK~~~~~GlR~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~---~~--~~~~~~~~~~~~ 271 (353)
T PRK05387 198 RYPNLLVVQTFSKSRSLAGLRVGFAIG-HPELIEALNRVKNSFNSYPLDRLAQAGAIAAIE---DE--AYFEETRAKVIA 271 (353)
T ss_pred hCCCEEEEEehhHhhcchhhhceeeec-CHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhc---CH--HHHHHHHHHHHH
Confidence 567899999999999999999999998 89999999887654 346788999999988886 22 778889999999
Q ss_pred HHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec
Q 018172 254 RWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRRFGADAKYARVSML 331 (360)
Q Consensus 254 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~ 331 (360)
+++.+.+.|++++ +.+. |.+ ++|+|+++++ .+.+.+.|.++||.+++....+ ..+++||+++
T Consensus 272 ~~~~l~~~L~~~g-~~~~-~~~-------------~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~-~~~~iRis~~ 335 (353)
T PRK05387 272 TRERLVEELEALG-FEVL-PSK-------------ANFVFARHPSHDAAELAAKLRERGIIVRHFNKPR-IDQFLRITIG 335 (353)
T ss_pred HHHHHHHHHHHCC-CeEC-CCc-------------CcEEEEECCCCCHHHHHHHHHHCCEEEEECCCCC-CCCeEEEEeC
Confidence 9999999999884 4332 323 3478888764 3667777889999998632222 3679999995
Q ss_pred CChHHHHHHHHHHHHHHh
Q 018172 332 SREEIFNIFLERLSAIQG 349 (360)
Q Consensus 332 ~~~e~~~~~~~~l~~~~~ 349 (360)
+++++++++++|+++++
T Consensus 336 -~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 336 -TDEEMEALVDALKEILA 352 (353)
T ss_pred -CHHHHHHHHHHHHHHhh
Confidence 67899999999999865
No 82
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.8e-38 Score=294.50 Aligned_cols=285 Identities=19% Similarity=0.262 Sum_probs=226.7
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
++|++. +. ++||++++++++. ++++|++|+|+++++..++..+ .+|+ ++++.|+|..+..++
T Consensus 50 ~~y~~~-~~-----~~lr~~ia~~~~~------~~~~i~it~Ga~~~l~~~~~~l-~~g~-----viv~~P~y~~~~~~~ 111 (356)
T PRK08056 50 ERYPDV-EY-----RHLHQALARHHQV------PASWILAGNGETESIFAVVSGL-KPRR-----AMIVTPGFAEYRRAL 111 (356)
T ss_pred ccCcCc-cH-----HHHHHHHHHHhCc------ChhhEEECCCHHHHHHHHHHHh-CCCC-----EEEeCCCcHHHHHHH
Confidence 457654 45 9999999999875 5569999999999999998886 5664 777889999999999
Q ss_pred HHhCCeeeeecCCc-ccccc--------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCCC--
Q 018172 105 DYLRSGLYKWDGDA-NTFDK--------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQY-- 169 (360)
Q Consensus 105 ~~~g~~~~~~~~~~-~~~~~--------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~~-- 169 (360)
+..|++++.++.+. +++.. .++++++++++||||||.++++ .+.++|+++++++|+||+|.+..+
T Consensus 112 ~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~ 191 (356)
T PRK08056 112 QQVGCEIRRYSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDE 191 (356)
T ss_pred HHcCCeEEEEecccccCCCccHHHHHhccCCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcc
Confidence 99999999998763 33333 3678999999999999999983 345677779999999999975321
Q ss_pred ---CcCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHH
Q 018172 170 ---TPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEY 246 (360)
Q Consensus 170 ---~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 246 (360)
.+.....+++++++||||.|+++|+|+||++++++++++.+.+.. ..++.+.+.|.++..++. +. .+..+
T Consensus 192 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~l~---~~--~~~~~ 264 (356)
T PRK08056 192 TGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQ--MPWSINAFAALAGEVILQ---DR--AYQQA 264 (356)
T ss_pred hHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhC--CCCchhHHHHHHHHHHhC---CH--HHHHH
Confidence 122234568999999999999999999999985678888887654 346677788888888775 32 77888
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCCC-CCCC
Q 018172 247 GRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRFG-ADAK 324 (360)
Q Consensus 247 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~-~~~~ 324 (360)
.++.++++++.+.+.|+.++++.+. + +.++|+|++++.. ..+.+.|.++||.++||..|. ...+
T Consensus 265 ~~~~~~~~r~~l~~~L~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~ 330 (356)
T PRK08056 265 TWQWLAEEGARFYQALCALPLLTVW-P-------------GRANYLFLRCERPDIDLQRALLTQRILIRSCANYPGLDSR 330 (356)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEc-C-------------CCCcEEEEEcCCChHHHHHHHHHCCeEEEECCCCCCCCCC
Confidence 8999999999999999988654432 2 2344889988643 566777778999999999884 3567
Q ss_pred eEEEEecCChHHHHHHHHHHHHHHh
Q 018172 325 YARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 325 ~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
++||++ .++++.+.++++|+++++
T Consensus 331 ~iRis~-~~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 331 YYRVAI-RSAAENERLLAALRNVLT 354 (356)
T ss_pred EEEEEE-cCHHHHHHHHHHHHHHHc
Confidence 999998 567888999999998764
No 83
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=3.5e-38 Score=290.72 Aligned_cols=269 Identities=19% Similarity=0.221 Sum_probs=217.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCCc
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDA 118 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 118 (360)
.+||++++++++. ++|++|+|+++++.+++ .+.+||+ |++++|+|+.+...++..|++++.++.+.
T Consensus 52 ~~Lr~~ia~~~~~--------~~I~it~Gs~~al~~~~--~~~~gd~----v~v~~P~y~~~~~~~~~~g~~~~~v~~~~ 117 (330)
T PRK05664 52 DGLEAAARAYYGA--------PQLLPVAGSQAAIQALP--RLRAPGR----VGVLSPCYAEHAHAWRRAGHQVRELDEAE 117 (330)
T ss_pred HHHHHHHHHHhCC--------CCEEECcCHHHHHHHHH--HccCCCE----EEEcCCChHHHHHHHHHcCCeEEEechhh
Confidence 8999999999983 48999999999999885 3578998 99999999999999999999999998753
Q ss_pred ccccc-CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCCC-CcCC--CCCCccEEEeccccccC
Q 018172 119 NTFDK-NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQY-TPIT--GAADHDIMLFTLSKCTG 190 (360)
Q Consensus 119 ~~~~~-~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~~-~~~~--~~~~~~i~~~S~sK~~~ 190 (360)
+.. -.++++++++|||||||.+++. .+.++|+++++++|+||+|.+... .++. ...+++++++||||+||
T Consensus 118 --~~~~~~~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~g 195 (330)
T PRK05664 118 --VEAALDSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFG 195 (330)
T ss_pred --HhhhhcCCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeecccccc
Confidence 211 1357889999999999999993 334556668999999999975421 2222 23468999999999999
Q ss_pred CCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q 018172 191 HAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGL 270 (360)
Q Consensus 191 ~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 270 (360)
+||+|+||+++ ++++++.+.+... .++.+.+.|.++.++|+ +. .+.++.++.++++++.+.+.|++++ +.
T Consensus 196 l~GlRiG~~v~-~~~l~~~~~~~~~--~~~~~~~~~~~~~~~L~---~~--~~~~~~~~~~~~~r~~l~~~L~~~~-~~- 265 (330)
T PRK05664 196 LAGARLGFVLA-EPALLRALAELLG--PWTVSGPTRWLAQAALA---DT--PWQRRQRERLLAASQRLAALLRRHG-LT- 265 (330)
T ss_pred CCCcceEEEEe-CHHHHHHHHHhcC--CCCCCHHHHHHHHHHHh---Ch--HHHHHHHHHHHHHHHHHHHHHHHCC-Cc-
Confidence 99999999999 8999999987754 45678899999988887 32 6678889999999999999999984 22
Q ss_pred CCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 271 PEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
+.++ ..+|+|++.++...+.+.|.++||.+++ |+ .++++||+++.++++++++.++|+++.++
T Consensus 266 --~~~~-----------~~~f~~~~~~~~~~~~~~l~~~gi~v~~---f~-~~~~iRis~~~~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 266 --PAGG-----------CALFQWVRTEDAAALHEFLARRGILTRL---FE-QPASLRFGLPADEADWARLDQALLAYRKE 328 (330)
T ss_pred --ccCC-----------cceEEEEecCCHHHHHHHHHHCCeEEEE---CC-CCCeEEEECCCCHHHHHHHHHHHHHHHhh
Confidence 3232 2247899887667778888899999985 54 36799999976788899999999887654
No 84
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-38 Score=295.33 Aligned_cols=286 Identities=21% Similarity=0.249 Sum_probs=230.5
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|+++. . ++||++++++++. ++++|++|+|+++++..++..++++||. |++++|+|+.+...+
T Consensus 62 ~~Y~~~~-~-----~~Lr~~ia~~~~~------~~~~I~it~G~~~~l~~~~~~~~~~gd~----vlv~~p~y~~~~~~~ 125 (369)
T PRK08153 62 WKYGDPE-N-----HDLRHALAAHHGV------APENIMVGEGIDGLLGLIVRLYVEPGDP----VVTSLGAYPTFNYHV 125 (369)
T ss_pred hcCCCCc-c-----HHHHHHHHHHhCC------CHHHEEEcCCHHHHHHHHHHHhcCCCCE----EEECCCcchHHHHHH
Confidence 4577654 4 8999999999975 5579999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecCCcccccc--------CCCeeEEEEcCCCCCCcccchH-HH---HHHhhhcCcEEEEeecccCCC----
Q 018172 105 DYLRSGLYKWDGDANTFDK--------NNGAYIEVVNSPNNPDGTIREA-VL---AKVNRSAEGKLIHDLAYYWPQ---- 168 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~~~~~--------~~~~~~i~~~~p~NPtG~~~~~-~~---~~~~~~~~~~li~D~ay~~~~---- 168 (360)
...|++++.++.+.+..+. +++++++++++||||||.+++. ++ .++++ +++++|+||+|.+..
T Consensus 126 ~~~g~~~~~vp~~~~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~~ 204 (369)
T PRK08153 126 AGFGGRLVTVPYRDDREDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAGA 204 (369)
T ss_pred HHcCCeEEEeeCCCCCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCccc
Confidence 9999999999876543322 3578999999999999999993 33 34455 589999999998532
Q ss_pred CCcCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHH
Q 018172 169 YTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGR 248 (360)
Q Consensus 169 ~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 248 (360)
..++....+++++++||||+||++|+|+||+++ ++++++.+.+.+. .++.+.++|.++.++++ +. .++++.+
T Consensus 205 ~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~-~~~~~~~l~~~~~--~~~~s~~~q~~~~~~l~---~~--~~~~~~~ 276 (369)
T PRK08153 205 APPIDTDDPNVIRMRTFSKAYGLAGARVGYAIG-APGTIKAFDKVRN--HFGMNRIAQAAALAALK---DQ--AYLAEVV 276 (369)
T ss_pred chhhhhcCCCEEEEecchHhccCcchheeeeec-CHHHHHHHHHhhc--CCCCCHHHHHHHHHHhc---CH--HHHHHHH
Confidence 223333456899999999999999999999999 8999999987764 46789999999999886 33 7888999
Q ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHHhhCeeee-CCCCCCCCC
Q 018172 249 RLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLRAERIMAR-GGRRFGADA 323 (360)
Q Consensus 249 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gI~~~-pg~~f~~~~ 323 (360)
+.++++++.+.+.|++.+ +... | +.++|+|++++. ...+.+.|.++||.++ ||... .+
T Consensus 277 ~~~~~~r~~~~~~L~~~g-~~~~-p-------------~~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~v~~p~~~~--~~ 339 (369)
T PRK08153 277 GKIAAARDRIAAIARANG-LTPL-P-------------SATNFVAIDCGRDGAFARAVLDGLIARDIFVRMPGVAP--LD 339 (369)
T ss_pred HHHHHHHHHHHHHHHHCC-CccC-C-------------CcCcEEEEECCCCcccHHHHHHHHHHCCeEEeeCCCCC--CC
Confidence 999999999999999874 3322 3 334478888742 2567777778999995 66422 25
Q ss_pred CeEEEEecCChHHHHHHHHHHHHHHhchhc
Q 018172 324 KYARVSMLSREEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 324 ~~~R~s~~~~~e~~~~~~~~l~~~~~~~~~ 353 (360)
+++|++++ ++++++.++++|.+++...++
T Consensus 340 ~~iRis~~-~~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 340 RCIRVSCG-PDEELDLFAEALPEALEAARK 368 (369)
T ss_pred CeEEEecC-CHHHHHHHHHHHHHHHHHhhc
Confidence 69999995 788999999999999876554
No 85
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.8e-38 Score=293.59 Aligned_cols=294 Identities=21% Similarity=0.258 Sum_probs=236.7
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
+.|+++.|. ++||++++++++. ++++|++|+|++++++.++..++.+||+ |++++|+|..+...+
T Consensus 60 ~~y~~~~g~-----~~lr~~ia~~l~~------~~~~v~~~~g~t~al~~~~~~~~~~gd~----vl~~~p~y~~~~~~~ 124 (380)
T PRK06225 60 CKYPPPEGF-----PELRELILKDLGL------DDDEALITAGATESLYLVMRAFLSPGDN----AVTPDPGYLIIDNFA 124 (380)
T ss_pred CCCCCCcch-----HHHHHHHHHhcCC------CCCcEEEeCCHHHHHHHHHHHhcCCCCE----EEEcCCCCcchHHHH
Confidence 468888887 9999999999875 4568999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecCCc--ccccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCC--
Q 018172 105 DYLRSGLYKWDGDA--NTFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWP-- 167 (360)
Q Consensus 105 ~~~g~~~~~~~~~~--~~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~-- 167 (360)
+..|++++.++++. +++.. +++++++++++||||||.+++ +.+.++|+++|+++|+|++|.+.
T Consensus 125 ~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~ 204 (380)
T PRK06225 125 SRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAR 204 (380)
T ss_pred HHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhc
Confidence 99999999888642 12211 357899999999999999987 34567788899999999999632
Q ss_pred CCCc-CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHH
Q 018172 168 QYTP-ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEY 246 (360)
Q Consensus 168 ~~~~-~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 246 (360)
...+ .....++++++.||||.||++|+|+||+++ ++++++.+..... ...+.+.+.|.++...+.. . ..++++
T Consensus 205 ~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~-~~~l~~~~~~~~~-~~~~~~~~~~~~a~~~l~~--~--~~~~~~ 278 (380)
T PRK06225 205 EHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVA-TPDLIEVVKSIVI-NDLGTNVIAQEAAIAGLKV--K--DEWIDR 278 (380)
T ss_pred cCCchhhcCCCCEEEEeechhhcCCccceeEEEec-CHHHHHHHHHHHh-cccCCCHHHHHHHHHHHhc--c--hHHHHH
Confidence 1111 112347889999999999999999999999 8899999887653 4677889999998887763 2 277888
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccC-CCCCcccccccccCCCCCCcccccCCc----hHHHHHHHHhhCeeeeCCCCCCC
Q 018172 247 GRRLMSERWNMLRQVIRQSGVFGLP-EYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLRAERIMARGGRRFGA 321 (360)
Q Consensus 247 ~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gI~~~pg~~f~~ 321 (360)
.++.++++++.+.+.|+++++..+. .+ +.++|+|++++. ...+.+.|.++||.++||..|+.
T Consensus 279 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~-------------~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~ 345 (380)
T PRK06225 279 IRRTTFKNQKLIKEAVDEIEGVFLPVYP-------------SHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTSK 345 (380)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCccccCC-------------CCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccCc
Confidence 8888999999999999987554321 22 234477887753 26677777799999999987753
Q ss_pred --CCCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 322 --DAKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 322 --~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
+.+++|+|++.++|++++++++|+++++..|
T Consensus 346 ~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 346 RFGDRYIRVSFSIPREQVEVFCEEFPDVVETLR 378 (380)
T ss_pred CCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhh
Confidence 3569999998899999999999999998765
No 86
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.9e-38 Score=290.06 Aligned_cols=276 Identities=20% Similarity=0.286 Sum_probs=221.7
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
.++|+++ |. ++||++++++++..+ + ++++|++|+|++++++.++..+ |. |++++|+|+.+..+
T Consensus 50 ~~~Y~~~-~~-----~~Lr~aia~~~~~~~--~-~~~~i~it~Ga~~~i~~~~~~~----d~----v~v~~P~y~~~~~~ 112 (335)
T PRK14808 50 LRIYYDS-PD-----EELIEKILSYLDTDF--L-SKNNVSVGNGADEIIYVMMLMF----DR----SVFFPPTYSCYRIF 112 (335)
T ss_pred hhcCCCC-Ch-----HHHHHHHHHHhCCCC--C-CcceEEEcCCHHHHHHHHHHHh----Cc----EEECCCCHHHHHHH
Confidence 3446654 55 999999999998654 3 4569999999999999999887 56 99999999999999
Q ss_pred HHHhCCeeeeecCCcccccc---CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC---CCcCCCCC
Q 018172 104 TDYLRSGLYKWDGDANTFDK---NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ---YTPITGAA 176 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~~~~---~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~---~~~~~~~~ 176 (360)
++..|++++.++.+.+.... -.++++++++|||||||.+++ +.+.++++ +++++|+||+|.+.. ..+.....
T Consensus 113 ~~~~g~~~~~v~~~~~~~~~~~~~~~~~~i~i~nP~NPTG~~~s~~~l~~l~~-~~~~ii~DE~Y~~f~~~~~~~~~~~~ 191 (335)
T PRK14808 113 AKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILK-TGAFVALDEAYYEFHGESYVDLLKKY 191 (335)
T ss_pred HHHcCCeEEEecCCCcCCCChhHccCCCEEEEeCCCCCCCCCcCHHHHHHHHh-cCCEEEEECchhhhcCCchHHHHHhC
Confidence 99999999999987543221 135789999999999999999 45667776 899999999998532 12222355
Q ss_pred CccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHH
Q 018172 177 DHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWN 256 (360)
Q Consensus 177 ~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 256 (360)
+++++++||||+|+++|+|+||+++ ++++++.+.+.+. .++.+.+.|.++.++++ +. .++.+.++.++++++
T Consensus 192 ~~vi~~~S~SK~~~l~GlRvG~~v~-~~~~~~~l~~~~~--~~~~~~~~q~a~~~~l~---~~--~~~~~~~~~~~~~r~ 263 (335)
T PRK14808 192 ENLAVIRTFSKAFSLAAQRIGYVVS-SEKFIDAYNRVRL--PFNVSYVSQMFAKVALD---HR--EIFEERTKFIVEERE 263 (335)
T ss_pred CCEEEEEechhhccCcccceEEEEe-CHHHHHHHHHhcC--CCCCCHHHHHHHHHHHh---CH--HHHHHHHHHHHHHHH
Confidence 7899999999999999999999999 8899999987663 46788899999888776 22 567778888888999
Q ss_pred HHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch--HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCCh
Q 018172 257 MLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED--EDCEKLLRAERIMARGGRRFGADAKYARVSMLSRE 334 (360)
Q Consensus 257 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~ 334 (360)
.+.+.|++++ +.+..+ .++|+|+.++.. ..+.+.|.++||.++. | .+++|+++ .++
T Consensus 264 ~l~~~L~~~g-~~~~~~--------------~g~f~~~~l~~~~~~~~~~~l~~~Gi~V~~---~---~~~~Risi-~~~ 321 (335)
T PRK14808 264 RMKSALREMG-YRITDS--------------RGNFVFIFMEKEEKERLLEHLRAKNIAVRS---F---REGVRITI-GKR 321 (335)
T ss_pred HHHHHHHHCC-CEECCC--------------CCeEEEEeCCCccHHHHHHHHHHCCeEEEE---C---CCCeEEec-CCH
Confidence 9999999884 443333 344788888643 6788899999999995 3 35899998 667
Q ss_pred HHHHHHHHHHHHH
Q 018172 335 EIFNIFLERLSAI 347 (360)
Q Consensus 335 e~~~~~~~~l~~~ 347 (360)
+++++++++|+++
T Consensus 322 ~~~~~~~~~l~~~ 334 (335)
T PRK14808 322 EENDMILKELEVF 334 (335)
T ss_pred HHHHHHHHHHHhh
Confidence 8889999999864
No 87
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-37 Score=292.65 Aligned_cols=293 Identities=22% Similarity=0.277 Sum_probs=232.7
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|++..|+ +++|++++++++. .+..+++ ++|++|+|++++++.++..++++||. |++++|+|..+..
T Consensus 66 ~~~y~~~~g~-----~~lr~~ia~~l~~~~~~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~----Vli~~p~~~~~~~ 135 (394)
T PRK06836 66 LHGYMPNAGY-----PEVREAIAESLNRRFGTPLTA-DHIVMTCGAAGALNVALKAILNPGDE----VIVFAPYFVEYRF 135 (394)
T ss_pred cccCCCCCCC-----HHHHHHHHHHHHHHhCCCCCc-CcEEEeCChHHHHHHHHHHhcCCCCE----EEEcCCCCccHHH
Confidence 3568888887 9999999999874 4555555 58999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCCcc--cccc-------CCCeeEEEEcCCCCCCcccchH----HHHHHhhh------cCcEEEEeec
Q 018172 103 ETDYLRSGLYKWDGDAN--TFDK-------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRS------AEGKLIHDLA 163 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~~--~~~~-------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~------~~~~li~D~a 163 (360)
+++..|++++.++.+.+ +++. +++++++++++||||||.+++. .+.++|++ +++++|+|++
T Consensus 136 ~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~ 215 (394)
T PRK06836 136 YVDNHGGKLVVVPTDTDTFQPDLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEP 215 (394)
T ss_pred HHHHcCCEEEEEecCCccCcCCHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEecc
Confidence 99999999999988765 3322 3678999999999999999982 45567777 7999999999
Q ss_pred ccCCC-----CCcCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHH------HHHHHhh-ccccCChHHHHHHHH
Q 018172 164 YYWPQ-----YTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARK------MTRFIEL-GSIGVSKESQLRAAK 231 (360)
Q Consensus 164 y~~~~-----~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~------l~~~~~~-~~~~~~~~~~~~~~~ 231 (360)
|.+.. .+.+....+++++++||||.|++||+|+||+++ ++++.+. +...... ...+.+.+.|.++..
T Consensus 216 y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 294 (394)
T PRK06836 216 YREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAV-NPEMEDADDLVAALVFANRILGFVNAPALMQRVVAK 294 (394)
T ss_pred ccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEec-CHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHH
Confidence 98432 222334567899999999999999999999998 6655332 2212221 124678889999988
Q ss_pred HhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhh
Q 018172 232 ILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAE 309 (360)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~ 309 (360)
++.. . ..+..++++++.+.+.|+++ ++.+..|.+++ |+|++++. ...+.+.|+++
T Consensus 295 ~l~~---~------~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~-------------~~~~~~~~~~~~~~~~~l~~~ 351 (394)
T PRK06836 295 CLDA---T------VDVSIYKRNRDLLYDGLTEL-GFECVKPQGAF-------------YLFPKSPEEDDVAFCEKAKKH 351 (394)
T ss_pred HhCC---h------HHHHHHHHHHHHHHHHHHhC-CCEeecCCceE-------------EEEEeCCCCCHHHHHHHHHhC
Confidence 8862 1 12567888999999999988 45555555554 77877754 35566888899
Q ss_pred CeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 310 RIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 310 gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
||.++||..|+. ++++||+++.+++++++++++|++++++.
T Consensus 352 gv~v~~g~~f~~-~~~iRi~~~~~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 352 NLLLVPGSGFGC-PGYFRLSYCVDTETIERSLPAFEKLAKEY 392 (394)
T ss_pred CEEEECchhcCC-CCeEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 999999999974 68999999889999999999999999764
No 88
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=7.6e-38 Score=292.48 Aligned_cols=281 Identities=20% Similarity=0.224 Sum_probs=221.7
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
++|+++. . ++||++++++++. ++++|++|+|++++++.++..++++||. |++++|+|+.+...+
T Consensus 73 ~~Y~~~~-~-----~~Lr~aia~~~~v------~~e~I~it~Gs~~ai~~~~~~l~~~gd~----Vli~~P~y~~~~~~~ 136 (370)
T PRK09105 73 GRYDLEL-E-----DDLRTLFAAQEGL------PADHVMAYAGSSEPLNYAVLAFTSPTAG----LVTADPTYEAGWRAA 136 (370)
T ss_pred cCCCCch-H-----HHHHHHHHHHhCc------ChhhEEEcCChHHHHHHHHHHHcCCCCE----EEEeCCChHHHHHHH
Confidence 3576554 5 9999999999875 5669999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecCCccc-cc-----c-CCCeeEEEEcCCCCCCcccch-HHHHHHhh--hcCcEEEEeecccCCCC-Cc--
Q 018172 105 DYLRSGLYKWDGDANT-FD-----K-NNGAYIEVVNSPNNPDGTIRE-AVLAKVNR--SAEGKLIHDLAYYWPQY-TP-- 171 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~~-~~-----~-~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~--~~~~~li~D~ay~~~~~-~~-- 171 (360)
+..|++++.++.+.+. ++ . .+++++++++|||||||.+++ +.+.++.+ ++++++|+||+|.+... ++
T Consensus 137 ~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~ 216 (370)
T PRK09105 137 DAQGAPVAKVPLRADGAHDVKAMLAADPNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVV 216 (370)
T ss_pred HHcCCeEEEecCCCCCCCCHHHHHhcCCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchH
Confidence 9999999998876431 11 1 357899999999999999998 33443332 25899999999974221 11
Q ss_pred -CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHH
Q 018172 172 -ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRL 250 (360)
Q Consensus 172 -~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (360)
+....+++++++||||.||++|+|+||+++ ++++++.+... ...+.+.+.|.++.+++. + +.++++.++.
T Consensus 217 ~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~-~~~~i~~l~~~---~~~~~~~~~~~aa~~~L~---~--~~~~~~~~~~ 287 (370)
T PRK09105 217 DLVAQRKDLIVLRTFSKLYGMAGMRLGLAAA-RPDLLAKLARF---GHNPLPVPAAAAGLASLR---D--PKLVPQRRAE 287 (370)
T ss_pred HHHhhCCCEEEEecccHhhcCCccceeeeec-CHHHHHHHHhc---CCCCcCHHHHHHHHHHHh---C--HHHHHHHHHH
Confidence 223467899999999999999999999998 89999988776 234577888888888776 2 2889999999
Q ss_pred HHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-chHHHHHHHHhhCeeeeCCCCCCCCCCeEEEE
Q 018172 251 MSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-EDEDCEKLLRAERIMARGGRRFGADAKYARVS 329 (360)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s 329 (360)
++++++.+.+.|+++ ++.+..+.+ +|++++++ +...+.+.|.++||.+ |..|+..++++|++
T Consensus 288 ~~~~r~~l~~~L~~~-g~~~~~~~~--------------~f~~~~~~~~~~~l~~~L~~~gI~v--~~~~~~~~~~~Ris 350 (370)
T PRK09105 288 NAAVREDTIAWLKKK-GYKCTPSQA--------------NCFMVDVKRPAKAVADAMAKQGVFI--GRSWPIWPNWVRVT 350 (370)
T ss_pred HHHHHHHHHHHHHHC-CCCcCCCCC--------------cEEEEeCCCCHHHHHHHHHHCCcEE--ecCCCCCCCeEEEE
Confidence 999999999999987 444443433 35567665 3366777777889998 34454347899999
Q ss_pred ecCChHHHHHHHHHHHHHH
Q 018172 330 MLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 330 ~~~~~e~~~~~~~~l~~~~ 348 (360)
++ +++++++++++|++++
T Consensus 351 ~~-~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 351 VG-SEEEMAAFRSAFAKVM 368 (370)
T ss_pred cC-CHHHHHHHHHHHHHHh
Confidence 85 6788899999998876
No 89
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7e-38 Score=293.45 Aligned_cols=285 Identities=22% Similarity=0.302 Sum_probs=226.3
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..+|++..| .+||++++++++. ++++|++|+|+++++..++..++++||+ |+++.|+|+.+...
T Consensus 65 ~~~Y~~~~g------~~lr~~ia~~~~~------~~~~i~~t~G~~~~l~~~~~~~~~~gd~----vli~~P~y~~~~~~ 128 (371)
T PRK05166 65 LRLYPDPQG------RALREAIAARTGV------PADRIILGNGSEDLIAVICRAVLRPGDR----VVTLYPSFPLHEDY 128 (371)
T ss_pred hhcCCCCcH------HHHHHHHHHHhCc------CHHHEEEcCCHHHHHHHHHHHhcCCCCE----EEEcCCChHHHHHH
Confidence 345887775 5899999999875 5569999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcc-cccc-------CCCeeEEEEcCCCCCCcccchH-HH---HHHhhhcCcEEEEeecccCCCC--
Q 018172 104 TDYLRSGLYKWDGDAN-TFDK-------NNGAYIEVVNSPNNPDGTIREA-VL---AKVNRSAEGKLIHDLAYYWPQY-- 169 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~~~-------~~~~~~i~~~~p~NPtG~~~~~-~~---~~~~~~~~~~li~D~ay~~~~~-- 169 (360)
++..|++++.++.+.+ +++. +++++++++++||||||.+++. .+ .++|+ +++++|+||+|.+...
T Consensus 129 ~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~-~~~~ii~De~y~~~~~~~ 207 (371)
T PRK05166 129 PTMMGARVERVTVTPDLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLARVLDATP-PETLIVVDEAYAEYAAGD 207 (371)
T ss_pred HHHcCCeEEEeecCCCCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECcHHHhcCCc
Confidence 9999999999987643 3322 3578999999999999999983 33 34455 5889999999984221
Q ss_pred --CcC----CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 170 --TPI----TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 170 --~~~----~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
++. ....+++++++||||.|+++|+|+||++++++++++.+.+.+. ..+.+.++|.++.+++. +. .+
T Consensus 208 ~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~--~~~~~~~~q~~~~~~l~---~~--~~ 280 (371)
T PRK05166 208 DYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRT--PFNVNGAAQAAALAALD---DE--EH 280 (371)
T ss_pred CcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhcc--CCCCCHHHHHHHHHHhc---CH--HH
Confidence 121 1234579999999999999999999987657889998877653 46788899988888776 32 78
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCCCCC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRFGAD 322 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~~~ 322 (360)
+++.++.++++++.+.+.|++++ +.+. | +.++|+|++++.. ..+.+.|.++||.++||..++.
T Consensus 281 ~~~~~~~~~~~r~~l~~~L~~~g-~~~~-p-------------~~g~fl~~~~~~~~~~l~~~l~~~gi~v~p~~~~~~- 344 (371)
T PRK05166 281 LAKGVALALAERERLKKELAEMG-YRIA-P-------------SRANFLFFDARRPASAVAEALLRQGVIVKPWKQPGF- 344 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCc-CeeC-C-------------CcCCEEEEeCCCCHHHHHHHHHHCCeEEecCCCCCC-
Confidence 99999999999999999999884 4332 3 2344889988643 6677777788999999987664
Q ss_pred CCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 323 AKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 323 ~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
++++||+++ .+++.+++.++|+++++
T Consensus 345 ~~~iRi~~~-~~~~~~~l~~~l~~i~~ 370 (371)
T PRK05166 345 ETFIRVSIG-SPEENDHFVAALDKVLE 370 (371)
T ss_pred CCeEEEEcC-CHHHHHHHHHHHHHHhh
Confidence 789999995 56667888888877653
No 90
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=1.4e-38 Score=297.68 Aligned_cols=295 Identities=25% Similarity=0.344 Sum_probs=236.4
Q ss_pred cccccccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCC
Q 018172 22 DLMSYLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQ 99 (360)
Q Consensus 22 ~~~~~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~ 99 (360)
.....|+++.|. ++||++++++++ ..+.+.+++.+|++|+|+.+++..++..+ .++|++ |++++|+|+.
T Consensus 35 ~~~~~Y~~~~g~-----~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~~~~~~----vlv~~P~y~~ 105 (363)
T PF00155_consen 35 SSFLGYPPPQGY-----PELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKINPGDT----VLVPDPCYPS 105 (363)
T ss_dssp TGCTSSTCTTHH-----HHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHSSTTSE----EEEEESSSTH
T ss_pred cccccCCCchhh-----HHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhccccccccc----ceecCCcccc
Confidence 355679999998 999999999988 55666666558999999999999999999 888998 9999999999
Q ss_pred cHHHHHHhCCeeeeecCC--------cccccc--CC------CeeEEEEcCCCCCCcccch-H---HHHHHhhhcCcEEE
Q 018172 100 YPAETDYLRSGLYKWDGD--------ANTFDK--NN------GAYIEVVNSPNNPDGTIRE-A---VLAKVNRSAEGKLI 159 (360)
Q Consensus 100 ~~~~~~~~g~~~~~~~~~--------~~~~~~--~~------~~~~i~~~~p~NPtG~~~~-~---~~~~~~~~~~~~li 159 (360)
+...++..|++++.++++ .+.+.. ++ +++++++++||||||.+++ + .+.++|+++++++|
T Consensus 106 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii 185 (363)
T PF00155_consen 106 YIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIII 185 (363)
T ss_dssp HHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEE
T ss_pred ccccccccCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhccccccee
Confidence 999999999999999854 122221 12 5789999999999999998 3 34455888999999
Q ss_pred EeecccCCCCC--------cCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHH
Q 018172 160 HDLAYYWPQYT--------PITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAK 231 (360)
Q Consensus 160 ~D~ay~~~~~~--------~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 231 (360)
+||+|.+..+. .......+++++.|+||+||++|+|+||+++ ++++++.+.+....... +.+.|.++.+
T Consensus 186 ~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~-~~~~~~~l~~~~~~~~~--~~~~~~~~~~ 262 (363)
T PF00155_consen 186 VDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVA-PPELIERLRRFQRSGLS--SSPMQAAAAA 262 (363)
T ss_dssp EEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEE-EHHHHHHHHHHHHHTTS--SHHHHHHHHH
T ss_pred eeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccc-hhhhhhhhhhccccccc--cchhhHHHHH
Confidence 99999963222 1223455589999999999999999999999 89999999988865444 8888988888
Q ss_pred HhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch--HHHHHHHHhh
Q 018172 232 ILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED--EDCEKLLRAE 309 (360)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~ 309 (360)
++.... ....++++.++.++++++.+.+.|+++ ++.+..+.+++ |+|+.++.. ..+.+.|.++
T Consensus 263 ~l~~~~-~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~-------------~~~~~~~~~~~~~l~~~L~~~ 327 (363)
T PF00155_consen 263 ALSDPE-LVEKWLEELRERLRENRDLLREALEEI-GITVLPPEAGF-------------FLWVRLDPNDAEELAQELLEE 327 (363)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHSBSS-------------EEEEEESHHHHHHHHHHHHHH
T ss_pred hhhccc-ccccccccchhhHHHHHHHHHHHHHHh-hhheeeccCcc-------------EEEEEcccchHHHHHHHHHHh
Confidence 777321 112389999999999999999999998 56655555554 778877653 4444445555
Q ss_pred -CeeeeCCCCCCCCCCeEEEEe-cCChHHHHHHHHHH
Q 018172 310 -RIMARGGRRFGADAKYARVSM-LSREEIFNIFLERL 344 (360)
Q Consensus 310 -gI~~~pg~~f~~~~~~~R~s~-~~~~e~~~~~~~~l 344 (360)
||.++||..|+. ++++|+++ +.++|++++++++|
T Consensus 328 ~gi~v~pg~~~~~-~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 328 YGILVRPGSYFGV-PGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp HTEEEEEGGGGTS-TTEEEEEGGCSCHHHHHHHHHHH
T ss_pred CCEEEEecCCCCC-CCEEEEEeccCCHHHHHHHHhhC
Confidence 999999999997 88999999 44999999999986
No 91
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.9e-38 Score=292.61 Aligned_cols=286 Identities=19% Similarity=0.216 Sum_probs=229.9
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
...|++ .|. ++||++++++++. .+.++|++|+|+++++..++..++++||+ |+++.|+|..+..+
T Consensus 57 ~~~Y~~-~~~-----~~lr~~ia~~~~~-----~~~~~I~~t~G~~~~i~~~~~~~~~~gd~----vlv~~P~y~~~~~~ 121 (356)
T PRK04870 57 LNRYPD-PRA-----AALKAALRAAMGV-----PAGADVLLGNGSDELIQLLALACAKPGAT----VLAPEPGFVMYRMS 121 (356)
T ss_pred cccCCC-CCH-----HHHHHHHHHHhCc-----CCCCcEEEcCCHHHHHHHHHHHhcCCCCE----EEECCCCHHHHHHH
Confidence 345776 455 9999999999975 12348999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcc-cccc--------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC---C
Q 018172 104 TDYLRSGLYKWDGDAN-TFDK--------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY---T 170 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~~~--------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~---~ 170 (360)
++..|++++.++++.+ +++. +.+++++++++||||||.+++ +.+.++++..+.++|+||+|.+... .
T Consensus 122 ~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~ 201 (356)
T PRK04870 122 AKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWL 201 (356)
T ss_pred HHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchH
Confidence 9999999999987643 2221 247899999999999999999 4555555544889999999974322 1
Q ss_pred cCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHH
Q 018172 171 PITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRL 250 (360)
Q Consensus 171 ~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (360)
+.....++++++.|||| ++++|+|+||+++ ++++++.+...+. .++.+.++|.++..+++ +. .++++.++.
T Consensus 202 ~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~-~~~~i~~~~~~~~--~~~~~~~~q~~a~~~l~---~~--~~~~~~~~~ 272 (356)
T PRK04870 202 PRLARFPNLLVMRTVSK-LGLAGLRLGYLAG-HPAWIAELDKVRP--PYNVNVLTQATALFALE---HV--DVLDAQAAQ 272 (356)
T ss_pred HHHhhCCCEEEEecchh-hhhHHHhhhhhhC-CHHHHHHHHHccC--CCcCCHHHHHHHHHHHh---CH--HHHHHHHHH
Confidence 12234568999999999 8999999999998 8999999887653 45788899988888776 21 568889999
Q ss_pred HHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCC-CCCeEEEE
Q 018172 251 MSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGA-DAKYARVS 329 (360)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~-~~~~~R~s 329 (360)
++++++.+.+.|++++++.+. + ..++|+|+++++...+.+.|.++||.++||..|+. .++++|+|
T Consensus 273 ~~~~~~~l~~~L~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis 338 (356)
T PRK04870 273 LRAERTRLAAALAALPGVTVF-P-------------SAANFILVRVPDAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVT 338 (356)
T ss_pred HHHHHHHHHHHHHhCCCcEEC-C-------------CCCeEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEe
Confidence 999999999999988655432 2 23348899988666777888999999999998853 47899999
Q ss_pred ecCChHHHHHHHHHHHHHH
Q 018172 330 MLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 330 ~~~~~e~~~~~~~~l~~~~ 348 (360)
++ +++++++++++|.+++
T Consensus 339 ~~-~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 339 VG-TPEENAQFLAALKAAL 356 (356)
T ss_pred CC-CHHHHHHHHHHHHHhC
Confidence 95 6788899999998764
No 92
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=3.7e-37 Score=290.14 Aligned_cols=300 Identities=16% Similarity=0.174 Sum_probs=225.7
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHhhcCCCCCC--CCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc
Q 018172 23 LMSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSD--GRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY 100 (360)
Q Consensus 23 ~~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~--~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~ 100 (360)
....|+++.|. ++||+++++++...+....+ .++|++|+|+++++.+++..++++||. |++++|+|+.+
T Consensus 36 ~~~~Y~~~~G~-----~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~----Vlv~~P~y~~~ 106 (388)
T PRK08637 36 EIFPYAPPQGI-----PELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDT----VLLPDHNWGNY 106 (388)
T ss_pred cccCCCCCCCC-----HHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCE----EEEcCCCCccH
Confidence 44579999998 99999999986544433332 257999999999999999999999998 99999999999
Q ss_pred HHHHH-HhCCeeeeecC--CccccccC-----------CCeeEEEEcCCCCCCcccchH----HHHHHhhh-----cCcE
Q 018172 101 PAETD-YLRSGLYKWDG--DANTFDKN-----------NGAYIEVVNSPNNPDGTIREA----VLAKVNRS-----AEGK 157 (360)
Q Consensus 101 ~~~~~-~~g~~~~~~~~--~~~~~~~~-----------~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~-----~~~~ 157 (360)
...+. ..|++++.+++ +.++++.+ +.++++++++||||||.++++ .+.++|++ ++++
T Consensus 107 ~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~ 186 (388)
T PRK08637 107 KLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVV 186 (388)
T ss_pred HHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEE
Confidence 98764 57999999987 44455331 345567889999999999993 34444442 8999
Q ss_pred EEEeecccCCCC-----CcC----CCCCCcc--EEEeccccccCCCCceEEEEeec-----CHHHHHHHHHH----Hhhc
Q 018172 158 LIHDLAYYWPQY-----TPI----TGAADHD--IMLFTLSKCTGHAGSRIGWALVK-----DTEVARKMTRF----IELG 217 (360)
Q Consensus 158 li~D~ay~~~~~-----~~~----~~~~~~~--i~~~S~sK~~~~~G~r~G~~~~~-----~~~~~~~l~~~----~~~~ 217 (360)
+|+||+|.+..+ .++ .+..+++ ++++|+||.+++||+|+||++++ ++++++.+.+. ....
T Consensus 187 iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 266 (388)
T PRK08637 187 AVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSN 266 (388)
T ss_pred EEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcc
Confidence 999999985322 111 1334565 44569999999999999999863 36888777642 1223
Q ss_pred cccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC---CcccCCCCCcccccccccCCCCCCcccc
Q 018172 218 SIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSG---VFGLPEYPLEYCNFTGKFTNSHPGFAWL 294 (360)
Q Consensus 218 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (360)
..+.|.+.|.++.++++ .+.+..++.+.++.++++++.+.+.|+.++ ++.+..|.+++ |+|+
T Consensus 267 ~~~~s~~~q~a~~~~l~--~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~-------------~~~~ 331 (388)
T PRK08637 267 ISNGPHPSQSAVLRALN--SPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGY-------------FMCL 331 (388)
T ss_pred cCCCCcHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceE-------------EEEe
Confidence 45789999999999887 334456677778889999999999998763 34444444444 8899
Q ss_pred cCCc--hHHH-HHHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHHhch
Q 018172 295 ESKE--DEDC-EKLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 295 ~~~~--~~~~-~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~ 351 (360)
++++ ...+ ..+++++||.+.+. .++++||+++. +++++++++++|.++++..
T Consensus 332 ~l~~~~~~~l~~~l~~~~gv~~~~~-----~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 332 KLKGVDAEELRVHLLEKYGIGTIAL-----NETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred cCChHHHHHHHHHHhhhcceEEEec-----cCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 8874 2444 44456789988742 25789999987 8999999999999998643
No 93
>PLN02397 aspartate transaminase
Probab=100.00 E-value=6.2e-37 Score=290.99 Aligned_cols=293 Identities=15% Similarity=0.163 Sum_probs=217.9
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcE-----EEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCC
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHI-----VIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYS 98 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i-----~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~ 98 (360)
..+|+++.|. ++||+++++++...+....++++| +.++|+.+ +...+..++++||+ |++++|+|+
T Consensus 84 ~~~Y~~~~G~-----~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~-l~~~~~~~~~pGd~----Vlv~~P~y~ 153 (423)
T PLN02397 84 NKEYLPIEGL-----AEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLR-LGAEFLARFYPGST----IYIPNPTWG 153 (423)
T ss_pred CCCCCCcCCC-----HHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHH-HHHHHHHHhCCCCE----EEEeCCCch
Confidence 3469999998 999999999875444333333343 33343333 34444455579998 999999999
Q ss_pred CcHHHHHHhCCeeeeecC-Ccc--cccc----------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEe
Q 018172 99 QYPAETDYLRSGLYKWDG-DAN--TFDK----------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHD 161 (360)
Q Consensus 99 ~~~~~~~~~g~~~~~~~~-~~~--~~~~----------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D 161 (360)
.|..+++..|++++.+++ +.+ +++. .++++++++++||||||.++++ .+.++|+++++++|+|
T Consensus 154 ~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~D 233 (423)
T PLN02397 154 NHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFD 233 (423)
T ss_pred hHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEe
Confidence 999999999999999876 222 2221 2467889999999999999993 4456788899999999
Q ss_pred ecccCCCCC-------cC---CCCCCccEEEeccccccCCCCceEEEEe--ecCHHHHH----HHHHHHhhccccCChHH
Q 018172 162 LAYYWPQYT-------PI---TGAADHDIMLFTLSKCTGHAGSRIGWAL--VKDTEVAR----KMTRFIELGSIGVSKES 225 (360)
Q Consensus 162 ~ay~~~~~~-------~~---~~~~~~~i~~~S~sK~~~~~G~r~G~~~--~~~~~~~~----~l~~~~~~~~~~~~~~~ 225 (360)
|+|.+..+. +. ....+++++++||||+|+++|||+||++ ++++++++ .+.+.......+.+.+.
T Consensus 234 e~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (423)
T PLN02397 234 SAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHG 313 (423)
T ss_pred cccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHH
Confidence 999854321 11 1233579999999999999999999985 43565544 34444444455778899
Q ss_pred HHHHHHHhccc--CCCchhHHHHHHHHHHHHHHHHHHHHHhcCC---cccCCCCCcccccccccCCCCCCcccccCCchH
Q 018172 226 QLRAAKILGIV--SDDYPNFFEYGRRLMSERWNMLRQVIRQSGV---FGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDE 300 (360)
Q Consensus 226 ~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (360)
|.++.++|+.. .+.+.++++++++.++++|+.+.+.|++++. +.+..|+|++ |+|+++++ +
T Consensus 314 q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~-------------fl~~~l~~-~ 379 (423)
T PLN02397 314 ASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGM-------------FSFTGLNK-E 379 (423)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceE-------------EEecCCCH-H
Confidence 99988888621 0111244788999999999999999999841 4555677776 88888864 6
Q ss_pred HHHHHHHhhCeeeeCCCCCCCCCCeEEEEec-CChHHHHHHHHHHHHHHh
Q 018172 301 DCEKLLRAERIMARGGRRFGADAKYARVSML-SREEIFNIFLERLSAIQG 349 (360)
Q Consensus 301 ~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~-~~~e~~~~~~~~l~~~~~ 349 (360)
++.+++.++||.+.+ .+ |++++ .+++.+++++++|+++++
T Consensus 380 ~~~~Ll~~~~V~v~~-------~~--Ri~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 380 QVDRMTKEYHIYMTR-------DG--RISMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred HHHHHHHhCCEEECC-------CC--eEEEeeCCHHHHHHHHHHHHHHHh
Confidence 888888999999973 22 99998 499999999999999985
No 94
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=9.1e-37 Score=285.86 Aligned_cols=285 Identities=20% Similarity=0.257 Sum_probs=229.1
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|++..+ .+||++++++++. ++++|++|+|+++++..++..++++||+ |++++|+|..+...+
T Consensus 62 ~~y~~~~~------~~lr~~ia~~~~~------~~~~i~~t~G~~~~l~~~~~~l~~~gd~----vl~~~p~y~~~~~~~ 125 (367)
T PRK02731 62 HRYPDGSG------FELKAALAEKFGV------DPERIILGNGSDEILELLARAYLGPGDE----VIYSEHGFAVYPIAA 125 (367)
T ss_pred cCCCCCcH------HHHHHHHHHHhCc------CHHHEEEcCCHHHHHHHHHHHhcCCCCE----EEEecCCHHHHHHHH
Confidence 45665442 7999999999975 5578999999999999999999999998 999999999999888
Q ss_pred HHhCCeeeeecCCcccccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhh--cCcEEEEeecccCCCC-----
Q 018172 105 DYLRSGLYKWDGDANTFDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRS--AEGKLIHDLAYYWPQY----- 169 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~~~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~--~~~~li~D~ay~~~~~----- 169 (360)
+..|++++.++.+..+++. ++++++|++++||||||.+++ +.+.++++. +++++|+|++|.+..+
T Consensus 126 ~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~ 205 (367)
T PRK02731 126 QAVGAKPVEVPAKDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYE 205 (367)
T ss_pred HHcCCeEEEecccCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcc
Confidence 9999999998875433322 367899999999999999998 455555543 4899999999974221
Q ss_pred CcC--CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHH
Q 018172 170 TPI--TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYG 247 (360)
Q Consensus 170 ~~~--~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (360)
.++ ....+++++++||||.||++|+|+||+++ ++++++.+.+... .++.+.++|.++.++++ + ..++++.
T Consensus 206 ~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~-~~~~~~~l~~~~~--~~~~~~~~~~~a~~~l~---~--~~~~~~~ 277 (367)
T PRK02731 206 DGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIA-PPEIIDALNRVRQ--PFNVNSLALAAAVAALD---D--DAFVEKS 277 (367)
T ss_pred cHHHHHhhcCCEEEEeeehHhhcCcccceeeeeC-CHHHHHHHHHccC--CCCCCHHHHHHHHHHhC---C--HHHHHHH
Confidence 111 13456899999999999999999999998 8999999987654 35678899999988886 3 2788999
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhhCeeeeCCCCCCCCCC
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERIMARGGRRFGADAK 324 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~pg~~f~~~~~ 324 (360)
++.++++++.+.+.|+++ ++.+. + +.++|+|+++++ ...+.+.|.++||.++|+..|+ .++
T Consensus 278 ~~~~~~~~~~l~~~L~~~-g~~~~-~-------------~~g~~~~i~~~~~~~~~~~~~~L~~~gI~v~~~~~~~-~~~ 341 (367)
T PRK02731 278 RALNAEGMAWLTEFLAEL-GLEYI-P-------------SVGNFILVDFDDGKDAAEAYQALLKRGVIVRPVAGYG-LPN 341 (367)
T ss_pred HHHHHHHHHHHHHHHHHC-CCccC-C-------------CCceEEEEECCCCCCHHHHHHHHHHCCEEEEeCCCCC-CCC
Confidence 999999999999999988 34433 2 223478888843 2667778888999999998887 367
Q ss_pred eEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 325 YARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 325 ~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
++|++++ +.+++++++++|+++++.
T Consensus 342 ~iRis~~-~~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 342 ALRITIG-TEEENRRFLAALKEFLAA 366 (367)
T ss_pred eEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 9999995 678899999999998753
No 95
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-36 Score=285.25 Aligned_cols=289 Identities=17% Similarity=0.184 Sum_probs=228.4
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|++ .|. ++||+++++++... |..++++ +|++|+|+++++..++..++++||. |+++.|+|+.+..
T Consensus 59 ~~~Y~~-~g~-----~~lr~aia~~~~~~~~~~~~~~-~I~it~G~~~~l~~~~~~~~~~gd~----v~v~~P~y~~~~~ 127 (368)
T PRK03317 59 LNRYPD-RDA-----VALRADLAAYLTAQTGVGLTVE-NVWAANGSNEILQQLLQAFGGPGRT----ALGFVPSYSMHPI 127 (368)
T ss_pred hccCCC-Cch-----HHHHHHHHHHhhhhccCCCChh-hEEECCCHHHHHHHHHHHhcCCCCE----EEEeCCChHHHHH
Confidence 356765 355 99999999998644 6666664 8999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCCc-ccccc--------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC--
Q 018172 103 ETDYLRSGLYKWDGDA-NTFDK--------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT-- 170 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~-~~~~~--------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~-- 170 (360)
.++..|.+++.++.+. .+++. ..+++++++++||||||.+++ +.+.++++..++++|+||+|.+....
T Consensus 128 ~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~ 207 (368)
T PRK03317 128 IARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGT 207 (368)
T ss_pred HHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCC
Confidence 9999999998887542 23322 246889999999999999999 56777777778999999999853211
Q ss_pred -c---CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHH
Q 018172 171 -P---ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEY 246 (360)
Q Consensus 171 -~---~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 246 (360)
+ ......++++++||||+||++|+|+||+++ ++++++.+...+ ..++.+++.|.++.++++.. ..+.+
T Consensus 208 ~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~-~~~~~~~l~~~~--~~~~~s~~~~~a~~~~l~~~-----~~~~~ 279 (368)
T PRK03317 208 PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAA-APAVVDALRLVR--LPYHLSAVTQAAARAALRHA-----DELLA 279 (368)
T ss_pred cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhC-CHHHHHHHHhcC--CCCCCCHHHHHHHHHHhhCH-----HHHHH
Confidence 1 112345789999999999999999999998 899999998765 35688899999998888731 34445
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeE
Q 018172 247 GRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYA 326 (360)
Q Consensus 247 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~ 326 (360)
.++.++++++.+.+.|+++ ++.+..+.+.+ ++|.++++...+.+.|.++||.++++ +. ++++
T Consensus 280 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~~Gv~v~~~---~~-~~~i 341 (368)
T PRK03317 280 SVAALRAERDRVVAWLREL-GLRVAPSDANF-------------VLFGRFADRHAVWQGLLDRGVLIRDV---GI-PGWL 341 (368)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCEeCCCCCcE-------------EEEeccCCHHHHHHHHHHCCEEEEeC---CC-CCeE
Confidence 5677899999999999987 44544444443 45556555567777888899999873 32 6799
Q ss_pred EEEecCChHHHHHHHHHHHHHHhc
Q 018172 327 RVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 327 R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
|++++ +++++++++++|++++..
T Consensus 342 Ri~~~-~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 342 RVTIG-TPEENDAFLAALAEVLAT 364 (368)
T ss_pred EEecC-CHHHHHHHHHHHHHHHHH
Confidence 99984 678899999999998754
No 96
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=2e-36 Score=305.46 Aligned_cols=302 Identities=15% Similarity=0.182 Sum_probs=227.9
Q ss_pred HHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 39 PELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 39 ~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
+++|+++++++.. +|.+.+++++|++|+|+++++..++.+++++||. |+++.|+|+.|...++..|++++.++++
T Consensus 733 pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~----VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~ 808 (1082)
T PLN02672 733 TDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGT----LCFPAGSNGTYVSAAKFLKANFRRIPTK 808 (1082)
T ss_pred hHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCE----EEEeCCChHHHHHHHHHcCCEEEEEecc
Confidence 7889999998765 5888877678999999999999999999999998 9999999999999999999999999986
Q ss_pred c-cccccC---------C-CeeEEEEcCCC-CCCcccchH----HHHHHhhhcCcEEEEeecccCCCCC-------cCC-
Q 018172 118 A-NTFDKN---------N-GAYIEVVNSPN-NPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQYT-------PIT- 173 (360)
Q Consensus 118 ~-~~~~~~---------~-~~~~i~~~~p~-NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~~~-------~~~- 173 (360)
. +++..+ + ++++|++++|| ||||.++++ .+.++|++++++||+||+|.+-.+. ++.
T Consensus 809 ~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s 888 (1082)
T PLN02672 809 SSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKS 888 (1082)
T ss_pred cccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhh
Confidence 3 455542 2 34689999997 999999993 4556788899999999999832211 111
Q ss_pred -----C---CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhccc---CCCchh
Q 018172 174 -----G---AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIV---SDDYPN 242 (360)
Q Consensus 174 -----~---~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~ 242 (360)
+ ...++++++||||.|+++|+|+||++++++++++.+.+.... .+.+...|.++.+++... ...+..
T Consensus 889 ~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~--s~~~~~~q~Aaaaalall~~~~~~~~~ 966 (1082)
T PLN02672 889 ILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGL--SRPHSTLKYTIKKLLGLKNQKSSDLLD 966 (1082)
T ss_pred HHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhh--cCCCcHHHHHHHHHHHHHhccCcHHHH
Confidence 1 123789999999999999999999999556699999876432 233345666665555322 123457
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC--------ch-HHHHHHHHhhCeee
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--------ED-EDCEKLLRAERIMA 313 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~l~~~gI~~ 313 (360)
++.+.++.++++++++.+.|+++ ++.+..|.|+++.|.+.... ...+.-.+.+ +. +....++++.||.+
T Consensus 967 ~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~~PeGGFfLwl~l~~~-l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV 1044 (1082)
T PLN02672 967 GVAEQKKILKSRAERLKETLEAC-GWDVLEPQGGISMVAKPSAY-LGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCI 1044 (1082)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCeEecCCcEEEEEEEcccc-ccccccccccccccccCCCHHHHHHHHHHcCCEEE
Confidence 78889999999999999999998 46677777887444311000 0000000111 22 44555666679999
Q ss_pred eCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 314 RGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 314 ~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
.||..|+. ++|+||+++.+++++++++++|+++++
T Consensus 1045 ~PGs~FG~-~g~~RIsfa~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1045 NSSSWTGI-PGYCRFSFALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred ecCcccCC-CCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 99998885 789999998899999999999998764
No 97
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=6.2e-36 Score=264.18 Aligned_cols=292 Identities=20% Similarity=0.255 Sum_probs=245.6
Q ss_pred cHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC
Q 018172 38 VPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG 116 (360)
Q Consensus 38 ~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 116 (360)
..++-+++++|.. +++..+.++ .|++++|.-.++..++..+.++||. |++..|.|++.....+..|.++...|+
T Consensus 62 ~~~~~~ai~~w~~~r~~~~i~~e-~i~~~p~VVpgi~~~I~~~T~~gd~----Vvi~tPvY~PF~~~i~~n~R~~i~~pL 136 (388)
T COG1168 62 SDELYAAIAHWFKQRHQWEIKPE-WIVFVPGVVPGISLAIRALTKPGDG----VVIQTPVYPPFYNAIKLNGRKVIENPL 136 (388)
T ss_pred CHHHHHHHHHHHHHhcCCCCCcc-eEEEcCcchHhHHHHHHHhCcCCCe----eEecCCCchHHHHHHhhcCcEEEeccc
Confidence 3889999999865 667777776 6999999999999999999999999 999999999999999999999998775
Q ss_pred C--cccc-------cc---CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCC------CCCcC--
Q 018172 117 D--ANTF-------DK---NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWP------QYTPI-- 172 (360)
Q Consensus 117 ~--~~~~-------~~---~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~------~~~~~-- 172 (360)
- ...+ +. +++.|+.++||||||||.++++ .+.++|++||+++|+||+|++- +++..
T Consensus 137 ~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~l 216 (388)
T COG1168 137 VEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASL 216 (388)
T ss_pred cccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhc
Confidence 3 2233 22 4567999999999999999994 3457899999999999999952 22222
Q ss_pred -CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHH-HHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHH
Q 018172 173 -TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARK-MTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRL 250 (360)
Q Consensus 173 -~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (360)
....++.+.+.|.||+|.++|+++++++.+++++.++ +++.......++|.++..+..++.+ .+. .|++++.+.
T Consensus 217 s~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~--~G~--~WLd~L~~y 292 (388)
T COG1168 217 SERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYN--QGE--PWLDELLEY 292 (388)
T ss_pred ChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH--hch--HHHHHHHHH
Confidence 1245788999999999999999999999988888555 4555556677889999999998888 344 999999999
Q ss_pred HHHHHHHHHHHHHhc-CCcccCCCCCcccccccccCCCCCCcccccCCch-----HHHHHHHHhhCeeeeCCCCCCC-CC
Q 018172 251 MSERWNMLRQVIRQS-GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-----EDCEKLLRAERIMARGGRRFGA-DA 323 (360)
Q Consensus 251 ~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~gI~~~pg~~f~~-~~ 323 (360)
++.+++++.+.++++ |++.+..|+|.+ .+|+++..- +....++.+.+|.+.+|+.||. +.
T Consensus 293 l~~N~~~~~~~l~~~~P~v~v~~p~gTY-------------L~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~ 359 (388)
T COG1168 293 LKDNRDYVADFLNKHLPGVKVTEPQGTY-------------LAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGS 359 (388)
T ss_pred HHHHHHHHHHHHHhhCCCcEEecCCCce-------------eeeeeccccCCChHHHHHHHHHhhcEeccCCCccCcCCC
Confidence 999999999999776 899999999887 678888542 5556677777999999999987 67
Q ss_pred CeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 324 KYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 324 ~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
+++|++++.+.+.+++++++|+..+...
T Consensus 360 gf~RlN~acpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 360 GFVRLNFACPRAILEEALERLKRALKKR 387 (388)
T ss_pred ceEEEecCCCHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999887653
No 98
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-36 Score=265.19 Aligned_cols=325 Identities=18% Similarity=0.296 Sum_probs=252.9
Q ss_pred HHHHHHhcCCceeeecC---CcccccccCCCCccccccHHHHHHHHHHHhh-cCC--CCCCCCcEEEcCChHHHHHHHHH
Q 018172 4 EAFWRKLGDKCTMVISG---SDLMSYLSDMGNVCWFLVPELAEAINNLHHV-VDN--AVSDGRHIVIGTGSTQLYQAALY 77 (360)
Q Consensus 4 ~~~~~~~~~~~~~~~~~---~~~~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~--~~~~~~~i~~t~G~t~~l~~~~~ 77 (360)
+.|.++..+.......+ .+.+..|++-.|. +++|+++|+|.+. +|. ..+|+ ++++|+|+|.++..+..
T Consensus 91 ~~wl~k~~~~~~~~~eg~~~f~~la~fqdy~Gl-----~~frqa~A~Fm~~~r~~~v~fdP~-~~Vv~~G~T~ane~l~f 164 (471)
T KOG0256|consen 91 ESWLSKNPEASNCTREGQSSFDELAMFQDYHGL-----PSFRQAVAEFMERARGNRVKFDPE-RVVVTNGATSANETLMF 164 (471)
T ss_pred HHHHHhChhhhhcccccccchhhHhhcccccCc-----hHHHHHHHHHHHHHhCCCCccCcc-ceEEecccchhhHHHHH
Confidence 45666644433322222 2344669999998 9999999999653 333 35554 89999999999999999
Q ss_pred hhcCCCCCCCceEEEeCCCCCCcHHHHHH-hCCeeeeecCCc-ccccc---------------CCCeeEEEEcCCCCCCc
Q 018172 78 ALSSPGGPEPISVVSAAPYYSQYPAETDY-LRSGLYKWDGDA-NTFDK---------------NNGAYIEVVNSPNNPDG 140 (360)
Q Consensus 78 ~l~~~gd~~~~~vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~-~~~~~---------------~~~~~~i~~~~p~NPtG 140 (360)
.|.+|||. .++|.|.|+...+-++. .|++++++..+. +++.. +-+.|.|+++||+||.|
T Consensus 165 cLadpgda----fLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG 240 (471)
T KOG0256|consen 165 CLADPGDA----FLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLG 240 (471)
T ss_pred HhcCCCce----eeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCC
Confidence 99999999 99999999999877766 489999888653 35443 35889999999999999
Q ss_pred ccchH----HHHHHhhhcCcEEEEeecccC-----CCCCcCC------C-CCCccEEEeccccccCCCCceEEEEeecCH
Q 018172 141 TIREA----VLAKVNRSAEGKLIHDLAYYW-----PQYTPIT------G-AADHDIMLFTLSKCTGHAGSRIGWALVKDT 204 (360)
Q Consensus 141 ~~~~~----~~~~~~~~~~~~li~D~ay~~-----~~~~~~~------~-~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~ 204 (360)
.++++ .+..++.++++.+|+||+|+. ..+.++. . ..+++-++.|+||-||+||+|+|.|.+.++
T Consensus 241 ~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne 320 (471)
T KOG0256|consen 241 TTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNE 320 (471)
T ss_pred CccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecCh
Confidence 99994 234567779999999999984 2233322 1 567888999999999999999999999889
Q ss_pred HHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccccccc
Q 018172 205 EVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKF 284 (360)
Q Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 284 (360)
+++....++..+ ...++..|..++.+|.. ..-.+.++++.+++++.+..++.+.|++++ +.+.+..++
T Consensus 321 ~VvsaA~kmssf--~~vSs~tQ~~la~LLSD-~~f~~~yl~en~~Rl~~rh~~~~~gLk~lg-I~cl~s~AG-------- 388 (471)
T KOG0256|consen 321 DVVSAATKMSSF--GLVSSQTQYLLASLLSD-EEFTREYLRENNKRLRIRHRYIVEGLKALG-IPCLKSNAG-------- 388 (471)
T ss_pred HHHHHHHHHhhc--cCCcHHHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHHHhhHHhcC-CceeecCCe--------
Confidence 999999998765 46788999999998873 111358999999999999999999999995 444444333
Q ss_pred CCCCCCcccccCCc--------h--HHHHHHHHhhCeeeeCCCCCCC-CCCeEEEEecC-ChHHHHHHHHHHHHHHhchh
Q 018172 285 TNSHPGFAWLESKE--------D--EDCEKLLRAERIMARGGRRFGA-DAKYARVSMLS-REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 285 ~~~~~~~~~~~~~~--------~--~~~~~~l~~~gI~~~pg~~f~~-~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~~ 352 (360)
.|+|+++.. + +...+.+.+-++.+.||+.|.+ .+||+|++|+. .++.++-++++|++++....
T Consensus 389 -----lF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~~~ 463 (471)
T KOG0256|consen 389 -----LFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLDSQV 463 (471)
T ss_pred -----eEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHHhhh
Confidence 378888742 1 3445556555999999999965 79999999988 67777779999999998665
Q ss_pred ccC
Q 018172 353 SNG 355 (360)
Q Consensus 353 ~~~ 355 (360)
...
T Consensus 464 ~~l 466 (471)
T KOG0256|consen 464 QPL 466 (471)
T ss_pred ccc
Confidence 443
No 99
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.1e-36 Score=284.64 Aligned_cols=274 Identities=23% Similarity=0.298 Sum_probs=222.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEE-cCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVI-GTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~-t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
+++|++++++++. ++++|++ |+|+++++..++..++++||+ |++++|+|+.+...++..|++++.++.+
T Consensus 72 ~~lr~~ia~~~~~------~~~~i~~~~~Ga~~~i~~~~~~~~~~gd~----vlv~~p~y~~~~~~~~~~g~~~~~~~~~ 141 (361)
T PRK00950 72 PELREALSKYTGV------PVENIIVGGDGMDEVIDTLMRTFIDPGDE----VIIPTPTFSYYEISAKAHGAKPVYAKRE 141 (361)
T ss_pred HHHHHHHHHHhCC------CHHHEEEeCCCHHHHHHHHHHHhcCCCCE----EEEcCCChHHHHHHHHHcCCEEEEeecC
Confidence 8999999999975 5568999 799999999999999999998 9999999999999999999999988755
Q ss_pred cc-cccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC---CCcCCCCCCccEEEecc
Q 018172 118 AN-TFDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ---YTPITGAADHDIMLFTL 185 (360)
Q Consensus 118 ~~-~~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~---~~~~~~~~~~~i~~~S~ 185 (360)
.+ +++. +++++++++++||||||.+++ +.+.++++++++++|+|++|.+.. ..++....+++++++||
T Consensus 142 ~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~ 221 (361)
T PRK00950 142 EDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTF 221 (361)
T ss_pred CCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEee
Confidence 44 2221 357899999999999999999 567778888999999999998532 12222345688999999
Q ss_pred ccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhc
Q 018172 186 SKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQS 265 (360)
Q Consensus 186 sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 265 (360)
||+||++|+|+||+++ ++++++.+.+... ..+.+.+.|.++.+++. +. +++++.++.++++++.+.+.|+ +
T Consensus 222 SK~~g~~GlRiG~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~a~~~l~---~~--~~~~~~~~~~~~~r~~l~~~l~-~ 292 (361)
T PRK00950 222 SKVFGLAGLRIGYGFV-PEWLIDYYMRAKT--PFSLTRLSQAAAIAALS---DK--EYIEKSIEHGIKSREYLYNELP-F 292 (361)
T ss_pred hHhhcCchhhcchhcC-CHHHHHHHHHhcC--CCCCCHHHHHHHHHHhc---CH--HHHHHHHHHHHHHHHHHHhhcC-e
Confidence 9999999999999998 8999999887764 34577899988888776 32 7788889999999998888776 2
Q ss_pred CCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCCCCC-CCCeEEEEecCChHHHHHHHH
Q 018172 266 GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRRFGA-DAKYARVSMLSREEIFNIFLE 342 (360)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~f~~-~~~~~R~s~~~~~e~~~~~~~ 342 (360)
.+ .+ +.++|+|++++. ...+.+.|.++||.++||..|+. .++++|+|++ ++++++++++
T Consensus 293 ---~~-~~-------------~~~~~i~~~~~~~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~ 354 (361)
T PRK00950 293 ---KV-YP-------------SEANFVLVDVTPMTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLE 354 (361)
T ss_pred ---eE-CC-------------CcceEEEEECCCCCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHH
Confidence 11 12 233478888753 36677777788999999988854 4679999995 6778999999
Q ss_pred HHHHHHh
Q 018172 343 RLSAIQG 349 (360)
Q Consensus 343 ~l~~~~~ 349 (360)
+|+++++
T Consensus 355 ~L~~il~ 361 (361)
T PRK00950 355 ILKEIVE 361 (361)
T ss_pred HHHHHhC
Confidence 9998763
No 100
>PLN02368 alanine transaminase
Probab=100.00 E-value=2e-36 Score=284.62 Aligned_cols=243 Identities=14% Similarity=0.127 Sum_probs=198.2
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhc-CCCCCCCceEEEeCCCCCCcH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALS-SPGGPEPISVVSAAPYYSQYP 101 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~-~~gd~~~~~vl~~~p~~~~~~ 101 (360)
..+|+++.|. ++||++++++++.+ |..++++ +|++|+|+++++..++..++ ++||. |++++|+|+.|.
T Consensus 100 ~~~Y~~~~G~-----~~LR~aia~~~~~~~g~~~~~~-~I~it~Ga~~al~~~~~~l~~~pGd~----Vli~~P~Y~~y~ 169 (407)
T PLN02368 100 LGAYSDSRGL-----PGVRKEVAEFIERRDGYPSDPE-LIFLTDGASKGVMQILNAVIRGEKDG----VLVPVPQYPLYS 169 (407)
T ss_pred CCCCCCCCCC-----HHHHHHHHHHHHHhcCCCCChh-hEEEcccHHHHHHHHHHHHcCCCCCE----EEEeCCCCccHH
Confidence 5679999998 99999999998654 7777664 89999999999999999987 79998 999999999999
Q ss_pred HHHHHhCCeeeeecCCcc-cccc---------CC------CeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEe
Q 018172 102 AETDYLRSGLYKWDGDAN-TFDK---------NN------GAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHD 161 (360)
Q Consensus 102 ~~~~~~g~~~~~~~~~~~-~~~~---------~~------~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D 161 (360)
.+++..|++++.++++.+ ++.. ++ ++++++++|||||||.++++ .+.++|++++++||+|
T Consensus 170 ~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~D 249 (407)
T PLN02368 170 ATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGD 249 (407)
T ss_pred HHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 999999999999887642 2221 11 68999999999999999993 4556788899999999
Q ss_pred ecccCCCC------CcCC----C------CCCccEEEecccccc-CCCCceEEEEee--cCHHHHHHHHHHHhhccccCC
Q 018172 162 LAYYWPQY------TPIT----G------AADHDIMLFTLSKCT-GHAGSRIGWALV--KDTEVARKMTRFIELGSIGVS 222 (360)
Q Consensus 162 ~ay~~~~~------~~~~----~------~~~~~i~~~S~sK~~-~~~G~r~G~~~~--~~~~~~~~l~~~~~~~~~~~~ 222 (360)
|+|.+..+ .++. + ..+++++++||||+| +++|||+||+++ .++++++.+.+... ..++.|
T Consensus 250 E~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~-~~~~~~ 328 (407)
T PLN02368 250 EVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVAS-IALSPN 328 (407)
T ss_pred ccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhc-ccCCCC
Confidence 99985322 1211 1 134899999999998 899999999994 37899999988753 467889
Q ss_pred hHHHHHHHHHhcccC---CCc---hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcc
Q 018172 223 KESQLRAAKILGIVS---DDY---PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEY 277 (360)
Q Consensus 223 ~~~~~~~~~~l~~~~---~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 277 (360)
.++|.++.++++... ..+ .++++++++.+++||+.+.+.|++++++.+..|+|++
T Consensus 329 ~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gaf 389 (407)
T PLN02368 329 VSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAM 389 (407)
T ss_pred cHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeee
Confidence 999999999987421 111 2334567899999999999999999888888898888
No 101
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=1.9e-36 Score=279.30 Aligned_cols=281 Identities=19% Similarity=0.231 Sum_probs=225.5
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 23 LMSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 23 ~~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...+|+++.+ +++|+.++++++. ++++|++|+|+++++..+... +.+| . |++++|+|..+..
T Consensus 40 ~~~~y~~~~~------~~lr~~la~~~~~------~~~~i~~t~G~~~~i~~~~~~-l~~g-~----vl~~~p~y~~~~~ 101 (330)
T TIGR01140 40 AWARYPDPEY------DELRAAAAAYYGL------PAASVLPVNGAQEAIYLLPRL-LAPG-R----VLVLAPTYSEYAR 101 (330)
T ss_pred HHhhCCCccH------HHHHHHHHHHhCC------ChhhEEECCCHHHHHHHHHHH-hCCC-e----EEEeCCCcHHHHH
Confidence 4456876663 8999999999874 456999999999999997666 5666 5 9999999999999
Q ss_pred HHHHhCCeeeeecCCccccccC-CCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCCCC-cCC---
Q 018172 103 ETDYLRSGLYKWDGDANTFDKN-NGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQYT-PIT--- 173 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~~~~~~~-~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~~~-~~~--- 173 (360)
+++..|.+++.++ |.+.+... .+++++++++||||||.+++. .+.++|+++|+++|+|++|.+.... +..
T Consensus 102 ~~~~~g~~~~~~~-d~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~ 180 (330)
T TIGR01140 102 AWRAAGHEVVELP-DLDRLPAALEELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQA 180 (330)
T ss_pred HHHHcCCEEEEeC-CHHHHHhhcccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHh
Confidence 9999999999998 65555432 357899999999999999982 3456777899999999999853222 221
Q ss_pred CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHH
Q 018172 174 GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSE 253 (360)
Q Consensus 174 ~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 253 (360)
+..+++++++||||.||++|+|+||+++ ++++++.+..... ..+.+.++|.++..+++ +. .+.++.++++++
T Consensus 181 ~~~~~~i~~~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~--~~~~s~~~q~~~~~~l~---~~--~~~~~~~~~~~~ 252 (330)
T TIGR01140 181 ARFPGLVVLRSLTKFFGLAGLRLGFVVA-HPALLARLREALG--PWTVNGPARAAGRAALA---DT--AWQAATRARLAA 252 (330)
T ss_pred ccCCCEEEEEecchhhcCchhhhhheeC-CHHHHHHHHhcCC--CCCchHHHHHHHHHHHh---ch--HHHHHHHHHHHH
Confidence 2357899999999999999999999999 7889999887754 45678899999988887 32 677888999999
Q ss_pred HHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCC-CCCeEEEEecC
Q 018172 254 RWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGA-DAKYARVSMLS 332 (360)
Q Consensus 254 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~-~~~~~R~s~~~ 332 (360)
+++.+.+.|++++.+... + +.++|+|+++++..++.+.|.++||.++||..|+. ..+++|++++.
T Consensus 253 ~~~~l~~~L~~~~~~~~~-~-------------~~~~f~~~~~~~~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~~ 318 (330)
T TIGR01140 253 ERARLAALLARLGGLEVV-G-------------GTALFLLVRTPDAAALHEALARRGILIRDFDNFPGLDPRYLRFALPT 318 (330)
T ss_pred HHHHHHHHHHhCCCceEC-C-------------CCCeEEEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEecC
Confidence 999999999998654332 2 23348999988776677777889999999999953 56799999977
Q ss_pred ChHHHHHHHHHHH
Q 018172 333 REEIFNIFLERLS 345 (360)
Q Consensus 333 ~~e~~~~~~~~l~ 345 (360)
+.++ ++++++|+
T Consensus 319 ~~~~-~~~~~~l~ 330 (330)
T TIGR01140 319 DEEN-DRLEEALA 330 (330)
T ss_pred HHHH-HHHHHhhC
Confidence 6666 88888763
No 102
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-36 Score=278.39 Aligned_cols=275 Identities=21% Similarity=0.237 Sum_probs=216.8
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..+|++ .|. ++||++++++++. ++++|++|+|+++++..++..+ +||+ |+++.|+|+.+..+
T Consensus 49 ~~~Y~~-~g~-----~~lr~~ia~~~~~------~~~~I~~t~G~~~~l~~~~~~~--~gd~----V~v~~P~y~~~~~~ 110 (337)
T PRK03967 49 FNRYPH-ITS-----DPLREAIAEFYGL------DAENIAVGNGSDELISYLVKLF--EGKH----IVITPPTFGMYSFY 110 (337)
T ss_pred cccCCC-CCH-----HHHHHHHHHHhCc------CcceEEEcCCHHHHHHHHHHHh--CCCe----EEEeCCChHHHHHH
Confidence 345764 566 9999999999984 5569999999999999888776 6888 99999999999998
Q ss_pred HHHhCCeeeeecCCcc-cccc------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC---CCcC
Q 018172 104 TDYLRSGLYKWDGDAN-TFDK------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ---YTPI 172 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~~~------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~---~~~~ 172 (360)
++..|.+++.++.+.+ +++. .++++++++++||||||.+++ +++.++++ +++++|+||+|.+.. ..+.
T Consensus 111 ~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~~~~~~~ 189 (337)
T PRK03967 111 AKLNGIPVIDVPLKEDFTIDGERIAEKAKNASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSGKSLIGL 189 (337)
T ss_pred HHHcCCeEEEeecCCCCCcCHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhcccchHHH
Confidence 9999999999987643 2321 257889999999999999999 56667776 799999999998532 1222
Q ss_pred CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHH
Q 018172 173 TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMS 252 (360)
Q Consensus 173 ~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 252 (360)
....+++++++||||+|+++|+|+||+++ ++++++.+.+... .++.+.++|.++..+++ +. +++.+.++.+.
T Consensus 190 ~~~~~~vi~l~S~SK~~~l~GlRiG~iv~-~~~~i~~~~~~~~--~~~~~~~~q~~~~~~l~---~~--~~~~~~~~~~~ 261 (337)
T PRK03967 190 IDEYPNLILLRTFSKAFGLAGIRAGYAIA-NEEIIDALYRIKP--PFSLNILTMKIVRLALD---HY--DLIEERIDYII 261 (337)
T ss_pred HhhCCCEEEEecchHhhcchhhhheeeec-CHHHHHHHHhhcC--CCCCCHHHHHHHHHHHh---CH--HHHHHHHHHHH
Confidence 24457899999999999999999999999 8999999988764 35778999999988886 22 56666666777
Q ss_pred HHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC
Q 018172 253 ERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYARVSMLS 332 (360)
Q Consensus 253 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~ 332 (360)
++++.+.+.|+++. .| +.++|+|++++ +.+.|.++||.++++... ..+++||+++
T Consensus 262 ~~r~~l~~~L~~~~-----~~-------------~~~~~~~~~~~----~~~~l~~~gi~v~~~~~~--~~~~~Ri~~~- 316 (337)
T PRK03967 262 KERERVRRELGEYA-----YP-------------SDANFLLLKLD----AYDYLLENGIVVRKLSGR--LEGHIRVTVG- 316 (337)
T ss_pred HHHHHHHHHhccCc-----CC-------------CCCcEEEEhHH----HHHHHHHCCEEEEeCCCC--CCCeEEEecC-
Confidence 78888888887651 12 33458888763 567777889999986532 3679999984
Q ss_pred ChHHHHHHHHHHHHHHhc
Q 018172 333 REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 333 ~~e~~~~~~~~l~~~~~~ 350 (360)
++++.++++++|.++.+.
T Consensus 317 ~~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 317 KREENDEFIKALKEIKEG 334 (337)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 566778899998887654
No 103
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=1.1e-35 Score=271.92 Aligned_cols=263 Identities=19% Similarity=0.220 Sum_probs=198.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCCc
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDA 118 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 118 (360)
..||++++++++ ++|++|+|+++++..++..+ .+||+ |++++|+|+.+..+++..|++++.+++|.
T Consensus 43 ~~l~~~ia~~~~---------~~I~vt~G~~~al~~~~~~~-~~gd~----vlv~~P~y~~~~~~~~~~g~~~~~~~~d~ 108 (311)
T PRK08354 43 EWLEEEFSKLFG---------EPIVITAGITEALYLIGILA-LRDRK----VIIPRHTYGEYERVARFFAARIIKGPNDP 108 (311)
T ss_pred HHHHHHHHHHHC---------CCEEECCCHHHHHHHHHHhh-CCCCe----EEEeCCCcHHHHHHHHHcCCEEeecCCCH
Confidence 789999999987 36999999999999887544 48998 99999999999999999999999998887
Q ss_pred cccccC-CCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccccccCCCC
Q 018172 119 NTFDKN-NGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCTGHAG 193 (360)
Q Consensus 119 ~~~~~~-~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~~~~G 193 (360)
+.+... .+++++++++||||||.+++. .+.++|+++++++|+||+|.+..+.......+++++++||||+|++||
T Consensus 109 ~~l~~~~~~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~l~G 188 (311)
T PRK08354 109 EKLEELVERNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYGLPG 188 (311)
T ss_pred HHHHHhhcCCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcCCcc
Confidence 666442 256889999999999999993 445677779999999999985432211123678999999999999999
Q ss_pred ceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCC
Q 018172 194 SRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEY 273 (360)
Q Consensus 194 ~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 273 (360)
+|+||+++ +.+.++..+. ....+.+.|.++.++++ +. .+++.+.++.++++++.+.+.+. ..
T Consensus 189 lRiG~~v~----~~~~l~~~~~--~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~l~~~l~-------~~- 250 (311)
T PRK08354 189 IRVGYVKG----FEEAFRSVRM--PWSIGSTGYAFLEFLIE---DD-FEHLRKTMPLIWREKERFEKALY-------VK- 250 (311)
T ss_pred ceeeeeee----hHHHHHHcCC--CccCCHHHHHHHHHHHH---hH-HHHHHHHHHHHHHHHHHHHHhcC-------CC-
Confidence 99999998 4455655543 34555566666666655 22 24555555666665555444331 11
Q ss_pred CCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 274 PLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
+.++|+++++++...+.+.|.++||.++||..|+. ++++||+++ .+++.++++++|+++.
T Consensus 251 -------------~~~~~~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~-~~~iRi~~~-~~~~~~~l~~al~~~~ 310 (311)
T PRK08354 251 -------------SDANFFIKDVGDAEKFVEFLKRNGILVRDCTSFGL-PGYIRFSVR-DREENEKLIRALREWR 310 (311)
T ss_pred -------------CCCcEEEEECCCHHHHHHHHHHCCeEEEecccCCC-CCeEEEEeC-CHHHHHHHHHHHHHhh
Confidence 33446667776666677778899999999999974 689999994 5556688888887753
No 104
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=8.3e-36 Score=277.19 Aligned_cols=282 Identities=23% Similarity=0.308 Sum_probs=226.4
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
.+|+++.+ +++|++++++++. ++++|++|+|+++++..++..++++||+ |++++|+|+.+..++
T Consensus 49 ~~y~~~~~------~~lr~~ia~~~~~------~~~~i~~~~G~~~~l~~~~~~l~~~gd~----v~~~~p~y~~~~~~~ 112 (346)
T TIGR01141 49 HRYPDPDP------AELKQALADYYGV------DPEQILLGNGSDEIIELLIRAFLEPGDA----VLVPPPTYSMYEISA 112 (346)
T ss_pred hcCCCCCH------HHHHHHHHHHhCc------ChHHEEEcCCHHHHHHHHHHHhcCCCCE----EEEcCCCHHHHHHHH
Confidence 45766553 8999999999984 5568999999999999999999999998 999999999988889
Q ss_pred HHhCCeeeeecCCccc-cc-----c--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhc--CcEEEEeecccCCCCC---
Q 018172 105 DYLRSGLYKWDGDANT-FD-----K--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSA--EGKLIHDLAYYWPQYT--- 170 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~~-~~-----~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~--~~~li~D~ay~~~~~~--- 170 (360)
+..|.+++.++.+.++ .+ . ++++++|++++||||||.+++ +.+.++++.. ++++|+|++|.+....
T Consensus 113 ~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~ 192 (346)
T TIGR01141 113 KIHGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPST 192 (346)
T ss_pred HHcCCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccH
Confidence 9999999999876543 11 1 467899999999999999999 4555555544 9999999999842211
Q ss_pred -cCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHH
Q 018172 171 -PITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRR 249 (360)
Q Consensus 171 -~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 249 (360)
+.....+++++++|+||.||++|+|+||+++ ++++++.+..... .++.+.++|.++.++++ .. .++++.++
T Consensus 193 ~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~---~~--~~~~~~~~ 264 (346)
T TIGR01141 193 LPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIA-NAEIIDALNKVRA--PFNLSRLAQAAAIAALR---DD--DFIEKTVE 264 (346)
T ss_pred HHHHhhCCCEEEEehhhHhhhchhhhceeeec-CHHHHHHHHhccC--CCCCCHHHHHHHHHHhC---CH--HHHHHHHH
Confidence 1223345789999999999989999999998 8999999887653 46778899999888776 22 47889999
Q ss_pred HHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-hHHHHHHHHhhCeeeeCCCCCCCCCCeEEE
Q 018172 250 LMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-DEDCEKLLRAERIMARGGRRFGADAKYARV 328 (360)
Q Consensus 250 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~ 328 (360)
.++++++.+.+.|.+++++.+. +. .+.|+|+++++ .+.+.+.|.++||.+.||..|+..++++|+
T Consensus 265 ~~~~~~~~l~~~L~~~~g~~~~-~~-------------~g~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRl 330 (346)
T TIGR01141 265 EINAERERLYDGLKKLPGLEVY-PS-------------DANFVLIRFPRDADALFEALLEKGIIVRDLNSYPGLPNCLRI 330 (346)
T ss_pred HHHHHHHHHHHHHHhcCCCEEC-CC-------------cCCEEEEecCCCHHHHHHHHHHCCeEEEeCCCcCCCCCeEEE
Confidence 9999999999999988655432 22 23478888873 477777888899999999988533789999
Q ss_pred EecCChHHHHHHHHHHH
Q 018172 329 SMLSREEIFNIFLERLS 345 (360)
Q Consensus 329 s~~~~~e~~~~~~~~l~ 345 (360)
|++ +++++++++++|+
T Consensus 331 s~~-~~~~i~~~~~~l~ 346 (346)
T TIGR01141 331 TVG-TREENDRFLAALR 346 (346)
T ss_pred ecC-CHHHHHHHHHHhC
Confidence 985 7889999998763
No 105
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-35 Score=264.63 Aligned_cols=303 Identities=18% Similarity=0.202 Sum_probs=249.9
Q ss_pred ccccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. ++|...+.+..+ .+-.+...+.+|++|+|.|++++.++..+++.||+ |++++++|++....
T Consensus 94 lQYg~s~G~-----peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~----vlie~~ty~~AL~s 164 (472)
T KOG0634|consen 94 LQYGQSSGI-----PELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDH----VLIEEYTYPSALQS 164 (472)
T ss_pred hccccccCc-----HHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCc----eEEecccchHHHHh
Confidence 569999998 999999999544 33444555678999999999999999999999999 99999999999999
Q ss_pred HHHhCCeeeeecCCcccccc----------------CCCeeEE-EEcCCCCCCcccch----HHHHHHhhhcCcEEEEee
Q 018172 104 TDYLRSGLYKWDGDANTFDK----------------NNGAYIE-VVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDL 162 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~~~~----------------~~~~~~i-~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ 162 (360)
.+.+|++++++++|.+|+.. +++++++ .|++-+||||.+++ +.+.++|++|++++|+||
T Consensus 165 ~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDd 244 (472)
T KOG0634|consen 165 MEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDD 244 (472)
T ss_pred ccccCceEEeccccCCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecC
Confidence 99999999999999888765 1345554 55677999999998 467789999999999999
Q ss_pred cccCCCCC------------------------cC--CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhh
Q 018172 163 AYYWPQYT------------------------PI--TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIEL 216 (360)
Q Consensus 163 ay~~~~~~------------------------~~--~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~ 216 (360)
.|..-.+. +. .+..+|||-..||||.++ ||+|+||+.+ +..+++++.+....
T Consensus 245 pYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~-~~~~l~ril~~ae~ 322 (472)
T KOG0634|consen 245 PYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITG-NSLFLKRILDLAEV 322 (472)
T ss_pred ccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeec-CHHHHHHHhhhcce
Confidence 99831111 00 145689999999999999 9999999999 88888888888877
Q ss_pred ccccCChHHHHHHHHHhcccC-CCchhHHHHHHHHHHHHHHHHHHHHHhc-CC--cccCCCCCcccccccccCCCCCCcc
Q 018172 217 GSIGVSKESQLRAAKILGIVS-DDYPNFFEYGRRLMSERWNMLRQVIRQS-GV--FGLPEYPLEYCNFTGKFTNSHPGFA 292 (360)
Q Consensus 217 ~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (360)
.+.+++..+|....++|+..- +++.+|+.+++..|.+|+..+..+|.++ +. ..+..|.++ +|+
T Consensus 323 ~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aG-------------mFi 389 (472)
T KOG0634|consen 323 ATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAG-------------MFI 389 (472)
T ss_pred eecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcc-------------eEE
Confidence 888899999999999888532 3456899999999999999999999887 32 233444444 489
Q ss_pred cccCC-------ch-----HHHHHHHHhhCeeeeCCCCCCCC-----C-CeEEEEecC-ChHHHHHHHHHHHHHHhch
Q 018172 293 WLESK-------ED-----EDCEKLLRAERIMARGGRRFGAD-----A-KYARVSMLS-REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 293 ~~~~~-------~~-----~~~~~~l~~~gI~~~pg~~f~~~-----~-~~~R~s~~~-~~e~~~~~~~~l~~~~~~~ 351 (360)
|++++ +. +.+...+.++||.+++|+.|..+ . -++|++++. +.|+++++++++..++.+.
T Consensus 390 wv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 390 WVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred EEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHH
Confidence 99886 32 66788899999999999999432 2 399999988 8999999999999999764
No 106
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=6e-35 Score=272.01 Aligned_cols=280 Identities=24% Similarity=0.304 Sum_probs=218.8
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|+ ..|. +++|++++++++. .+++|++|+|+++++..++..++++||+ |+++.|+|..+...+
T Consensus 52 ~~y~-~~g~-----~~lr~~ia~~~~~------~~~~I~~~~G~~~~l~~~~~~~~~~gd~----Vli~~p~y~~~~~~~ 115 (352)
T PRK03321 52 NRYP-DMGA-----VELRAALAEHLGV------PPEHVAVGCGSVALCQQLVQATAGPGDE----VIFAWRSFEAYPILV 115 (352)
T ss_pred CcCC-CCcH-----HHHHHHHHHHhCc------CHHHEEECCCHHHHHHHHHHHhcCCCCE----EEeCCCCHHHHHHHH
Confidence 4465 3465 9999999999984 4568999999999999999999999998 999999999998999
Q ss_pred HHhCCeeeeecCCc-ccccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhh--cCcEEEEeecccCCCCC---
Q 018172 105 DYLRSGLYKWDGDA-NTFDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRS--AEGKLIHDLAYYWPQYT--- 170 (360)
Q Consensus 105 ~~~g~~~~~~~~~~-~~~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~--~~~~li~D~ay~~~~~~--- 170 (360)
+..|.+++.++.+. .+++. +++++++++++||||||.+++ +.+.++++. +++++|+|++|.+..+.
T Consensus 116 ~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~ 195 (352)
T PRK03321 116 QVAGATPVQVPLTPDHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDV 195 (352)
T ss_pred HHcCCEEEEccCCCCCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCC
Confidence 99999999998763 23322 357899999999999999999 455555553 69999999999842221
Q ss_pred --c--CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHH
Q 018172 171 --P--ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEY 246 (360)
Q Consensus 171 --~--~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 246 (360)
+ .....+++++++||||.||++|+|+||+++ ++++++.+.+.. ...+.+.+.|.++.+++.. . ....+
T Consensus 196 ~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~-~~~~~~~~~~~~--~~~~~s~~~q~~a~~~l~~--~---~~~~~ 267 (352)
T PRK03321 196 PDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVG-HPEVIAALRKVA--VPFSVNSLAQAAAIASLAA--E---DELLE 267 (352)
T ss_pred CcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcC-CHHHHHHHHHhc--CCCCCCHHHHHHHHHHhcC--H---HHHHH
Confidence 1 113456899999999999999999999998 899999998763 4678899999988887762 1 33344
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCCCCCCCe
Q 018172 247 GRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRFGADAKY 325 (360)
Q Consensus 247 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~~~~~~ 325 (360)
..+.+.++++.+.+.|++.+ +.... +.++|+|++++.. ..+.+.|+++||.+++ |+ +.+
T Consensus 268 ~~~~~~~~r~~~~~~L~~~~-~~~~~--------------~~g~~i~i~l~~~~~~~~~~l~~~gI~v~~---~~--~~~ 327 (352)
T PRK03321 268 RVDAVVAERDRVRAALRAAG-WTVPP--------------SQANFVWLPLGERTADFAAAAAEAGVVVRP---FA--GEG 327 (352)
T ss_pred HHHHHHHHHHHHHHHHHHCC-CccCC--------------CCCCEEEEeCCCCHHHHHHHHHHCCEEEEc---cC--CCc
Confidence 44555666788999998874 33221 2234889888643 6677778899999987 44 356
Q ss_pred EEEEecCChHHHHHHHHHHHHHHh
Q 018172 326 ARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 326 ~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
+||++ .+++++++++++|.+++.
T Consensus 328 iRi~~-~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 328 VRVTI-GAPEENDAFLRAARAWRA 350 (352)
T ss_pred EEEee-CCHHHHHHHHHHHHHHhc
Confidence 99998 688889999999998754
No 107
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-34 Score=245.97 Aligned_cols=324 Identities=19% Similarity=0.219 Sum_probs=253.5
Q ss_pred hHHHHHHhcCCceeeecCCcccccccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcC
Q 018172 3 FEAFWRKLGDKCTMVISGSDLMSYLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSS 81 (360)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~ 81 (360)
|..||++...+...+..-...+.+|..++|. ..|-+++++++. .+|..++.. +|.+|+|++.+.+.++..+..
T Consensus 46 m~~~f~~~~aemla~~~~~e~~cnY~~pQG~-----~~li~ala~~l~~~ygwnit~~-NIalTnGSQs~fFYlfNlF~G 119 (417)
T COG3977 46 MDDYFQDLLAEMLASGKATEALCNYDGPQGK-----AVLIDALAKMLRREYGWNITAQ-NIALTNGSQSAFFYLFNLFAG 119 (417)
T ss_pred HHHHHHHHHHHHHhcchHHHHHhcCCCCcch-----hHHHHHHHHHHHHHhCCCCccc-eeeecCCccchHHHHHHHhcC
Confidence 5788888887777766666778899999998 999999999876 568888876 899999999999999888843
Q ss_pred ---CCCCCCceEEEe-CCCCCCcHHHHHH-------------hCCeeeeecCCccccccCCCeeEEEEcCCCCCCcccch
Q 018172 82 ---PGGPEPISVVSA-APYYSQYPAETDY-------------LRSGLYKWDGDANTFDKNNGAYIEVVNSPNNPDGTIRE 144 (360)
Q Consensus 82 ---~gd~~~~~vl~~-~p~~~~~~~~~~~-------------~g~~~~~~~~~~~~~~~~~~~~~i~~~~p~NPtG~~~~ 144 (360)
.|+. ++|++| .|.|..|..+.-. +....-+..+|.+.+...+++.+|+++-|.||||.+++
T Consensus 120 ~~sdG~~--k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~e~~g~ic~SRPtNPTGNVlT 197 (417)
T COG3977 120 RRSDGTE--KKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHIGESTGAICVSRPTNPTGNVLT 197 (417)
T ss_pred ccCCCcc--eeEeeccChhhccccccccCccceeeccCCcccccccceeeccCHHHcccccccceEEecCCCCCCCCccc
Confidence 3443 456666 6999888766322 11112234456666777889999999999999999998
Q ss_pred H----HHHHHhhhcCcEEEEeecccCCCCC----cC-CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHh
Q 018172 145 A----VLAKVNRSAEGKLIHDLAYYWPQYT----PI-TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIE 215 (360)
Q Consensus 145 ~----~~~~~~~~~~~~li~D~ay~~~~~~----~~-~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~ 215 (360)
+ .+..++++||+.+|+|.+|+-+... .. +-..++.+.+.|+|| .|+||.|+|-+++ ++++++.+.++..
T Consensus 198 deE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK-~GLPG~R~GIiIa-ne~viqaitnmn~ 275 (417)
T COG3977 198 DEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSK-LGLPGSRCGIIIA-NEKVIQAITNMNG 275 (417)
T ss_pred HHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeehhh-cCCCCcceeEEEc-cHHHHHHHHhccc
Confidence 3 3457888999999999999843211 11 136788999999999 8999999999998 9999999999999
Q ss_pred hccccCChHHHHHHHHHhcccCCCchhHHHH-HHHHHHHHHHHHHHHHHhc-C--CcccCCCCCcccccccccCCCCCCc
Q 018172 216 LGSIGVSKESQLRAAKILGIVSDDYPNFFEY-GRRLMSERWNMLRQVIRQS-G--VFGLPEYPLEYCNFTGKFTNSHPGF 291 (360)
Q Consensus 216 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (360)
..+..+..+++..++.+++ ++.....-++ ++..|+++.+...+.|++. + ...+.+|+|+. |
T Consensus 276 iisLap~~~G~Aia~~mie--~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAI-------------F 340 (417)
T COG3977 276 IISLAPGRMGPAIAAEMIE--SGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAI-------------F 340 (417)
T ss_pred eeeecCCCccHHHHHHHhh--cchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcce-------------e
Confidence 8889999999999999988 3333233333 4566888888888888765 2 34456777776 6
Q ss_pred ccccCCch----HHHHHHHHhhCeeeeCCCCCC--CC------CCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 292 AWLESKED----EDCEKLLRAERIMARGGRRFG--AD------AKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 292 ~~~~~~~~----~~~~~~l~~~gI~~~pg~~f~--~~------~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
+|+.+++- +.+++.|+++|+.++||+.|- .+ ..|+|+++..++++++..+++|.+.+++.
T Consensus 341 lWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~~~ie~Gva~lae~ve~~ 412 (417)
T COG3977 341 LWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIEKGVAILAEEVERA 412 (417)
T ss_pred ehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecCCCHHHHHHHHHHHHHHHHHH
Confidence 66666552 889999999999999999883 22 34799999889999999999999998764
No 108
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=5.2e-31 Score=243.17 Aligned_cols=273 Identities=15% Similarity=0.110 Sum_probs=211.0
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEe---CCCCCCcHHHHHHhCCeeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSA---APYYSQYPAETDYLRSGLYKW 114 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~---~p~~~~~~~~~~~~g~~~~~~ 114 (360)
+.+|++.+++|++. +++++++++|+++++..++.++.++||+ |+++ .|+|..+...++..|++++.+
T Consensus 56 ~~~Le~~lA~~~g~------~~e~ilv~~gg~~a~~~~~~al~~~gd~----Vli~~~d~p~~~s~~~~~~l~ga~~~~~ 125 (346)
T TIGR03576 56 EEKVQELGREHLGG------PEEKILVFNRTSSAILATILALEPPGRK----VVHYLPEKPAHPSIPRSCKLAGAEYFES 125 (346)
T ss_pred HHHHHHHHHHHcCC------CcceEEEECCHHHHHHHHHHHhCCCCCE----EEECCCCCCCchhHHHHHHHcCCEEecc
Confidence 48888889999886 5678999999999999999999999998 8864 579999999999999987544
Q ss_pred cCCccccccCCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCCCc----CCCCCCccEEEeccc
Q 018172 115 DGDANTFDKNNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQYTP----ITGAADHDIMLFTLS 186 (360)
Q Consensus 115 ~~~~~~~~~~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~~~----~~~~~~~~i~~~S~s 186 (360)
. +.+.+...+++++|+++ ++||+|.+++ +.+.++|+++++++++||+|..+.... .....+.++++.|||
T Consensus 126 ~-~l~~l~~~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~S 203 (346)
T TIGR03576 126 D-ELSELKKIDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTD 203 (346)
T ss_pred C-CHHHHhhCcCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEeccc
Confidence 2 22334334567888875 4689999976 345567777999999999998642111 011223468889999
Q ss_pred cccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 018172 187 KCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSG 266 (360)
Q Consensus 187 K~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 266 (360)
| +++|+|+||+++ ++++++.+.+......++.+++.|.++.++|+.. ..+..++.++++++.+.+.++.+
T Consensus 204 K--alaG~r~G~v~~-~~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~------~~~~~~~~l~~r~~~~~~~l~~~- 273 (346)
T TIGR03576 204 K--LMDGPRGGLLAG-RKELVDKIKSVGEQFGLEAQAPLLAAVVRALEEF------ELSRIRDAFKRKEEVYLRLFDKL- 273 (346)
T ss_pred h--hccccceEEEEe-CHHHHHHHHHhhcCcccCccHHHHHHHHHHHhhc------cHHHHHHHHHHHHHHHHHHHHhC-
Confidence 9 568999999998 8999999998887666678889999888888631 13567888999988888888753
Q ss_pred CcccCCCCCcccccccccCCCCCCcccccCCc--h-HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChH---HHHHH
Q 018172 267 VFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--D-EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREE---IFNIF 340 (360)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e---~~~~~ 340 (360)
.+. + +.++|+|++++. . +++.++|+++||.++||..|...++|+|||++.+++ +++.+
T Consensus 274 --~~~-~-------------~~~~f~~~~~~~~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~ 337 (346)
T TIGR03576 274 --NVE-R-------------TPTGFVIKGVEEEKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYL 337 (346)
T ss_pred --CCC-c-------------CCCeEEEEeCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHH
Confidence 221 1 233488888863 3 788999999999999998885447899999977665 78999
Q ss_pred HHHHHHHH
Q 018172 341 LERLSAIQ 348 (360)
Q Consensus 341 ~~~l~~~~ 348 (360)
+++|++.+
T Consensus 338 ~~al~~~~ 345 (346)
T TIGR03576 338 VEAVKDSL 345 (346)
T ss_pred HHHHHhcc
Confidence 99998754
No 109
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=3.4e-30 Score=239.43 Aligned_cols=295 Identities=26% Similarity=0.321 Sum_probs=238.7
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|.+..|. .+++++++++++.........+++++++|+++++..++..+.++|++ |+++.|+|.++..++
T Consensus 30 ~~~~~~~~~-----~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~----vl~~~~~~~~~~~~~ 100 (350)
T cd00609 30 LGYYPDPGL-----PELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDE----VLVPDPTYPGYEAAA 100 (350)
T ss_pred CCCCCCCCc-----HHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCCCE----EEEcCCCchhHHHHH
Confidence 347777887 99999999998863222223558999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecCCccccc----------cCCCeeEEEEcCCCCCCcccch-HH---HHHHhhhcCcEEEEeecccCCCC-
Q 018172 105 DYLRSGLYKWDGDANTFD----------KNNGAYIEVVNSPNNPDGTIRE-AV---LAKVNRSAEGKLIHDLAYYWPQY- 169 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~~~~----------~~~~~~~i~~~~p~NPtG~~~~-~~---~~~~~~~~~~~li~D~ay~~~~~- 169 (360)
+..|.+++.++.+.++.. .++++++|++++|+||||..++ +. +.++|+++|+++|+|++|+....
T Consensus 101 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~ 180 (350)
T cd00609 101 RLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYD 180 (350)
T ss_pred HHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeC
Confidence 999999998887643221 1468899999999999999998 22 34788889999999999985321
Q ss_pred ---C---cCCCCCCccEEEeccccccCCCCceEEEEeecCH-HHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchh
Q 018172 170 ---T---PITGAADHDIMLFTLSKCTGHAGSRIGWALVKDT-EVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 170 ---~---~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
. ...+..+++++++|++|.++.+|.|+||+++ ++ ++.+.+.........+.+...+.++..+++... .
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~ 255 (350)
T cd00609 181 GEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIA-PPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGE----E 255 (350)
T ss_pred CcccccccCcCccCcEEEEeecccccCCcccceEEEec-CHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcH----H
Confidence 1 1234667789999999999989999999999 55 899999888777678889999999888887322 6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCC
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRF 319 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f 319 (360)
++++.++.+.++++++.+.|.+.+......+ ..++++|+.+++. ..+.++|.++||.+.++..|
T Consensus 256 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-------------~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~ 322 (350)
T cd00609 256 HLEELRERYRRRRDALLEALKELGPLVVVKP-------------SGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAF 322 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccCC-------------CccEEEEEecCCCChHHHHHHHHHhCCEEEeccccc
Confidence 8899999999999999999999865442222 3344788887653 67888999999999998877
Q ss_pred CC-CCCeEEEEecCChHHHHHHHHHHHH
Q 018172 320 GA-DAKYARVSMLSREEIFNIFLERLSA 346 (360)
Q Consensus 320 ~~-~~~~~R~s~~~~~e~~~~~~~~l~~ 346 (360)
.. ...++|++++..+|++++++++|++
T Consensus 323 ~~~~~~~iRi~~~~~~~~i~~~~~al~~ 350 (350)
T cd00609 323 GEGGEGFVRLSFATPEEELEEALERLAE 350 (350)
T ss_pred ccCCCCeEEEEeeCCHHHHHHHHHHhhC
Confidence 52 4679999997789999999999863
No 110
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=1.2e-29 Score=240.23 Aligned_cols=284 Identities=15% Similarity=0.106 Sum_probs=215.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh----cCCCCCCCceEEEeCCCCCC----cHHHHHHhCCe
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL----SSPGGPEPISVVSAAPYYSQ----YPAETDYLRSG 110 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l----~~~gd~~~~~vl~~~p~~~~----~~~~~~~~g~~ 110 (360)
+++|+.++++++.. ++++|++|+|+|+++++++.++ +++||+ |++++|+|++ +...++..|++
T Consensus 63 ~~~r~~la~~~g~~-----~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~----Vl~~~~~~~s~~~~~~~~~~~~g~~ 133 (398)
T TIGR03392 63 ELARQQVARFLNAP-----DAENIVWTRGTTESINLVAQSYARPRLQPGDE----IIVSEAEHHANLIPWLMVAQQTGAK 133 (398)
T ss_pred HHHHHHHHHHhCCC-----CCCeEEEeCChHHHHHHHHHHhhhccCCCCCE----EEECCcchhHHHHHHHHHHHHcCcE
Confidence 78999999999861 2468999999999999999988 478887 9999999976 34556778999
Q ss_pred eeeecCCccc-ccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEE
Q 018172 111 LYKWDGDANT-FDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIM 181 (360)
Q Consensus 111 ~~~~~~~~~~-~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~ 181 (360)
++.++.+.++ ++. +++++++++++||||||.+++ +.+.++|+++|+++++|++|+.+..+......+.+++
T Consensus 134 v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~ 213 (398)
T TIGR03392 134 VVKLPIGADLLPDIRQLPELLTPRTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFY 213 (398)
T ss_pred EEEEecCCCCCcCHHHHHHHhccCceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEE
Confidence 9999876442 211 468999999999999999998 6778888889999999999986555433344567899
Q ss_pred EeccccccCCCCceEEEEeecCHHHHHHHHHHH---------------------hhccccCChHHHHHHHHHhcccCCCc
Q 018172 182 LFTLSKCTGHAGSRIGWALVKDTEVARKMTRFI---------------------ELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 182 ~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~---------------------~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
+.|++|.+|++| +||++. ++++++.+.... .+...+.+.....++.++++.+.+
T Consensus 214 ~~s~~K~~gp~G--~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~-- 288 (398)
T TIGR03392 214 AFSGHKLYGPTG--IGVLYG-KTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTD-- 288 (398)
T ss_pred EEecccccCCCc--eEEEEE-cHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHH--
Confidence 999999999766 899998 788777764221 111224555677777777775532
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCC
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRR 318 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~ 318 (360)
..+++++++..+.++++.+.|++++++.+..+.. ..++++.+++ .+++.+.|.++||.+++|..
T Consensus 289 -~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~-------------~~i~~~~~~~~~~~~l~~~L~~~gI~v~~g~~ 354 (398)
T TIGR03392 289 -IDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPG-------------SSLLAFDFAGVHHSDLAALLAESGIALRAGQH 354 (398)
T ss_pred -hCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC-------------CcEEEEEeCCcCHHHHHHHHHhCCEEEecCcc
Confidence 3456788888899999999999887665443221 1244545543 36788888999999999875
Q ss_pred CCC-------CCCeEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 319 FGA-------DAKYARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 319 f~~-------~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
+.. .++++|+|+.. +++|+++++++|++++..
T Consensus 355 ~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 355 CAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred chHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 421 25799999865 899999999999998764
No 111
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=2.2e-29 Score=238.60 Aligned_cols=284 Identities=14% Similarity=0.100 Sum_probs=215.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh----cCCCCCCCceEEEeCCCCCC----cHHHHHHhCCe
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL----SSPGGPEPISVVSAAPYYSQ----YPAETDYLRSG 110 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l----~~~gd~~~~~vl~~~p~~~~----~~~~~~~~g~~ 110 (360)
+++|+.++++++. .++++|++|+|+|++++.++.++ +++||+ |++++|+|++ +...++..|++
T Consensus 66 ~~~r~~la~~~g~-----~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~----vl~~~~~~~s~~~~~~~~~~~~g~~ 136 (401)
T PRK10874 66 EAAREQVAQLLNA-----PDAKNIVWTRGTTESINLVAQSYARPRLQPGDE----IIVSEAEHHANLVPWLMVAQQTGAK 136 (401)
T ss_pred HHHHHHHHHHcCC-----CCCCEEEEECCHHHHHHHHHHHhhhccCCCcCE----EEECCcchHHHHHHHHHHHHHhCCE
Confidence 7899999999985 13568999999999999999998 478888 9999999976 34556778999
Q ss_pred eeeecCCccc-c-----cc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEE
Q 018172 111 LYKWDGDANT-F-----DK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIM 181 (360)
Q Consensus 111 ~~~~~~~~~~-~-----~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~ 181 (360)
++.++.+.++ + .. +++++++++++|+||||..++ +++.++|+++|+++|+|++|+.+..+......+.+++
T Consensus 137 v~~v~~~~~~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~ 216 (401)
T PRK10874 137 VVKLPLGADRLPDVDLLPELITPRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFY 216 (401)
T ss_pred EEEEecCCCCcCCHHHHHHhcCcCcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhcCCCEE
Confidence 9998876432 1 11 478999999999999999998 6778888889999999999986554433345568899
Q ss_pred EeccccccCCCCceEEEEeecCHHHHHHHHHHH---------------------hhccccCChHHHHHHHHHhcccCCCc
Q 018172 182 LFTLSKCTGHAGSRIGWALVKDTEVARKMTRFI---------------------ELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 182 ~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~---------------------~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
+.|++|.+|++| +||++. ++++++.+.... .+...+.|...+.++.++++.+.+
T Consensus 217 ~~s~~K~~gp~G--~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~-- 291 (401)
T PRK10874 217 AFSGHKLYGPTG--IGVLYG-KSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLAD-- 291 (401)
T ss_pred EEecccccCCCc--cEEEEE-chHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHH--
Confidence 999999999777 699888 788877664221 112234566677777777775432
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCC
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRR 318 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~ 318 (360)
...++.+++.++.++++.+.|++++++....+... .++++.+++ .+++.+.|.++||.+++|..
T Consensus 292 -~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~-------------~i~~~~~~~~~~~~~~~~L~~~gI~v~~g~~ 357 (401)
T PRK10874 292 -IDINQAESWSRSLATLAEDALAKLPGFRSFRCQDS-------------SLLAFDFAGVHHSDLVTLLAEYGIALRAGQH 357 (401)
T ss_pred -hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCC-------------cEEEEEECCcCHHHHHHHHHHCCcEEecccc
Confidence 34556788888889999999998866654432221 234445543 36777888999999999875
Q ss_pred CCC-------CCCeEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 319 FGA-------DAKYARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 319 f~~-------~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
+.. ..+++|+|+.. +++|+++++++|++++..
T Consensus 358 ~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 358 CAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred chHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence 531 25799999966 999999999999998764
No 112
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=8.5e-29 Score=207.14 Aligned_cols=296 Identities=19% Similarity=0.242 Sum_probs=225.1
Q ss_pred cccccCCCC------ccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCC
Q 018172 24 MSYLSDMGN------VCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYY 97 (360)
Q Consensus 24 ~~~y~~~~g------~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~ 97 (360)
.++|+++.. +|++..++++.+++.- .+.+ +++|+++.|+.|.+..+++..+.||.. +++.-.|+|
T Consensus 51 ~~ryPdP~q~efk~~~~d~rnk~ls~a~~~d-----kpLt-~dnic~GvGsDE~ID~iiR~~c~PGke---KIl~cPPty 121 (375)
T KOG0633|consen 51 NPRYPDPEQMEFKYVYPDPRNKRLSDALAQD-----KPLT-SDNICVGVGSDELIDLIIRCVCDPGKE---KILDCPPTY 121 (375)
T ss_pred CCCCcCHHHcccccccCCcccchhhhhcccC-----CCCC-ccceEEecCcHHHHHHHHhheecCCcc---ceeecCCcc
Confidence 356776654 3333344444444432 2333 469999999999999999999999944 399999999
Q ss_pred CCcHHHHHHhCCeeeeecCCcc-c---------cccCCCeeEEEEcCCCCCCcccchH-HHHHHhh-hcCcEEEEeeccc
Q 018172 98 SQYPAETDYLRSGLYKWDGDAN-T---------FDKNNGAYIEVVNSPNNPDGTIREA-VLAKVNR-SAEGKLIHDLAYY 165 (360)
Q Consensus 98 ~~~~~~~~~~g~~~~~~~~~~~-~---------~~~~~~~~~i~~~~p~NPtG~~~~~-~~~~~~~-~~~~~li~D~ay~ 165 (360)
+.|..-+...++++++++..++ . ++.+.++|++++++|+||||....+ .+.++-+ -.+.++++||||.
T Consensus 122 sMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYi 201 (375)
T KOG0633|consen 122 SMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYI 201 (375)
T ss_pred eeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeE
Confidence 9999888889999999986642 1 2225689999999999999999883 3444333 3579999999999
Q ss_pred CCC----CCcCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCch
Q 018172 166 WPQ----YTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 166 ~~~----~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
++. ..++...+.+.+++.++||+||++|+|+||-.+ +..+++.+.+.+. .++.+..+..+|.+++.. +--
T Consensus 202 dFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~-~~~ia~iln~~Ka--PYNiS~~~s~~AL~Als~---~n~ 275 (375)
T KOG0633|consen 202 DFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAF-PLSIAEILNRAKA--PYNISVAGSVAALAALSD---SNG 275 (375)
T ss_pred eeccccccchHhHhCCceeehhhhhhhcCcceeEeecccc-cHHHHHHHHhccC--CccccchhHHHHHHhcCc---ccc
Confidence 643 344557899999999999999999999999998 8999999998875 577777888888777763 223
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch------HHHHHHHHhhCeeeeC
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED------EDCEKLLRAERIMARG 315 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~gI~~~p 315 (360)
..|+..++.+.+.|+++...|..+++..- +.| ...+||+.+.+.+. ....+.+...|+.++.
T Consensus 276 kkme~~rdaiv~er~RL~keLt~v~~~~~--~~g----------g~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRf 343 (375)
T KOG0633|consen 276 KKMEDVRDAIVRERERLFKELTEVPFLND--YPG----------GSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRF 343 (375)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCccccC--CCC----------cccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEE
Confidence 89999999999999999999999975442 222 25667888888743 3345666777999985
Q ss_pred -CCCCCCCCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 316 -GRRFGADAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 316 -g~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
|+--+ ..|++|+++ .++|+-+-+++-+++++
T Consensus 344 rgse~~-c~G~lRitv-Gt~EentvL~k~~K~~l 375 (375)
T KOG0633|consen 344 RGSEEG-CKGYLRITV-GTPEENTVLMKCLKQFL 375 (375)
T ss_pred cCCccc-cceeEEEEc-CCcccchHHHHHHHhhC
Confidence 22222 478999998 56666689999988763
No 113
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.96 E-value=4e-28 Score=230.29 Aligned_cols=284 Identities=13% Similarity=0.074 Sum_probs=213.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHh----hcCCCCCCCceEEEeCCCCCCc----HHHHHHhCCe
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYA----LSSPGGPEPISVVSAAPYYSQY----PAETDYLRSG 110 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~----l~~~gd~~~~~vl~~~p~~~~~----~~~~~~~g~~ 110 (360)
+++|++++++++.. ++++|++|+|+|++++.++.+ ++++||+ |++++++|++. ...++..|++
T Consensus 70 ~~~r~~la~~~~~~-----~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~----vl~~~~~~~s~~~~~~~~~~~~g~~ 140 (406)
T PRK09295 70 ENVRKQAALFINAR-----SAEELVFVRGTTEGINLVANSWGNSNVRAGDN----IIISEMEHHANIVPWQMLCARVGAE 140 (406)
T ss_pred HHHHHHHHHHcCcC-----CCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCE----EEECcchhhHHHHHHHHHHHHcCcE
Confidence 68999999999851 346899999999999999886 4578888 99999988754 4556678999
Q ss_pred eeeecCCccc------ccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEE
Q 018172 111 LYKWDGDANT------FDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIM 181 (360)
Q Consensus 111 ~~~~~~~~~~------~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~ 181 (360)
++.++.+.++ +.. ++++++|++++|+||||.+++ +.+.++|+++|+++++|++|..+..+......+.+++
T Consensus 141 v~~v~~~~~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~ 220 (406)
T PRK09295 141 LRVIPLNPDGTLQLETLPALFDERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY 220 (406)
T ss_pred EEEEecCCCCCCCHHHHHHhcCCCcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhcCCCEE
Confidence 9988865432 211 468999999999999999999 6777888889999999999987655433355677899
Q ss_pred EeccccccCCCCceEEEEeecCHHHHHHHHHH----------------------HhhccccCChHHHHHHHHHhcccCCC
Q 018172 182 LFTLSKCTGHAGSRIGWALVKDTEVARKMTRF----------------------IELGSIGVSKESQLRAAKILGIVSDD 239 (360)
Q Consensus 182 ~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~----------------------~~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (360)
+.|++|.+|++| +||++. ++++.+.+... ..+...+.+.....++.++++.+..
T Consensus 221 ~~s~~K~~gp~G--~G~l~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~- 296 (406)
T PRK09295 221 VFSGHKLYGPTG--IGILYV-KEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSA- 296 (406)
T ss_pred EeehhhccCCCC--cEEEEE-chHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHH-
Confidence 999999999777 899998 67776654311 1112335667777777778876542
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCC
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGR 317 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~ 317 (360)
..+++.+++.++.++++.+.|++++++.+..+.. ....+.+.++. .+++.+.|.++||.++.|.
T Consensus 297 --~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~------------~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~ 362 (406)
T PRK09295 297 --LGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQN------------RLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGH 362 (406)
T ss_pred --hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC------------CceEEEEEECCcCHHHHHHHHHhCCeEEeccc
Confidence 3467788889999999999999887666654421 11233444443 3677888999999999987
Q ss_pred CCCC-------CCCeEEEEecC--ChHHHHHHHHHHHHHHh
Q 018172 318 RFGA-------DAKYARVSMLS--REEIFNIFLERLSAIQG 349 (360)
Q Consensus 318 ~f~~-------~~~~~R~s~~~--~~e~~~~~~~~l~~~~~ 349 (360)
.+.. .++++|+|+.. ++||+++++++|+++..
T Consensus 363 ~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 363 HCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred cchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 4421 24689999976 89999999999998753
No 114
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.96 E-value=7.9e-28 Score=228.21 Aligned_cols=287 Identities=17% Similarity=0.174 Sum_probs=212.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh----cCCCCCCCceEEEeCCCCCCcH----HHHHHhCCe
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL----SSPGGPEPISVVSAAPYYSQYP----AETDYLRSG 110 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l----~~~gd~~~~~vl~~~p~~~~~~----~~~~~~g~~ 110 (360)
+++|+.++++++. .++++|++|+|+++++++++.++ .++||+ |+++++.|++.. ..++..|++
T Consensus 65 ~~~r~~ia~~~~~-----~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~----vl~~~~~~~s~~~~~~~~~~~~g~~ 135 (403)
T TIGR01979 65 EAVREKVAKFINA-----ASDEEIVFTRGTTESINLVAYSWGDSNLKAGDE----IVISEMEHHANIVPWQLLAERTGAT 135 (403)
T ss_pred HHHHHHHHHHhCc-----CCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCE----EEECcchhhHHHHHHHHHHHhcCcE
Confidence 7999999999986 12468999999999999998875 577887 999999888643 455667999
Q ss_pred eeeecCCccc-cc-----c--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEE
Q 018172 111 LYKWDGDANT-FD-----K--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIM 181 (360)
Q Consensus 111 ~~~~~~~~~~-~~-----~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~ 181 (360)
++.++.+.++ +. . +++++++++++|+||||..++ +++.++|+++|+++++|++|+.+..+......+.+++
T Consensus 136 ~~~v~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~ 215 (403)
T TIGR01979 136 LKFIPLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFY 215 (403)
T ss_pred EEEEecCCCCCCCHHHHHHHhccCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccccCCCEE
Confidence 9988876432 11 1 468999999999999999998 6777888889999999999986554433345578899
Q ss_pred EeccccccCCCCceEEEEeecCHHHHHHHHHHH---------------------hhccccCChHHHHHHHHHhcccCCCc
Q 018172 182 LFTLSKCTGHAGSRIGWALVKDTEVARKMTRFI---------------------ELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 182 ~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~---------------------~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
+.|++|.+|++| +|++++ ++++++.+.... .+...+.+...+.++.++++.+..
T Consensus 216 ~~s~~K~~gp~G--~g~l~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~-- 290 (403)
T TIGR01979 216 VFSGHKMYGPTG--IGVLYG-KEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEA-- 290 (403)
T ss_pred EEecccccCCCC--ceEEEE-chHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHH--
Confidence 999999998777 899988 677776653211 011124455566666666764432
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCC
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRR 318 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~ 318 (360)
..+++.+++..+.++.+.+.|+.++++.+..|... ...+.++.+.+++ ..++.+.|+++||.+++|..
T Consensus 291 -~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~---------~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g~~ 360 (403)
T TIGR01979 291 -IGLENIEAHEHELTAYALERLGEIPGLRIYGPRDA---------EDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHH 360 (403)
T ss_pred -hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCc---------cccCceEEEEeCCcCHHHHHHHHhhCCEEEcchhh
Confidence 23677888999999999999998876766544310 0112344455543 36677899999999998763
Q ss_pred --------CCCCCCeEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 319 --------FGADAKYARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 319 --------f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
++. ++++|+|+.. +++|+++++++|+++++.
T Consensus 361 ~~~~~~~~~~~-~~~iRiS~~~~~t~~di~~l~~~l~~~~~~ 401 (403)
T TIGR01979 361 CAQPLMRRFGV-PATCRASFYIYNTEEDIDALVEALKKVRKF 401 (403)
T ss_pred hhHHHHHHhCC-CCEEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 332 5799999965 899999999999987764
No 115
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=1.7e-27 Score=227.08 Aligned_cols=291 Identities=13% Similarity=0.122 Sum_probs=214.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh----cCCCCCCCceEEEeCCCCCCc----HHHHHHhCCe
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL----SSPGGPEPISVVSAAPYYSQY----PAETDYLRSG 110 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l----~~~gd~~~~~vl~~~p~~~~~----~~~~~~~g~~ 110 (360)
+++|+.++++++.. ++++|++|+|+|++++.++..+ +++||+ |+++.+.|++. ...++..|++
T Consensus 79 ~~~r~~la~~~~~~-----~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~----vl~~~~~~~s~~~~~~~~a~~~g~~ 149 (424)
T PLN02855 79 ELARKKVAAFINAS-----TSREIVFTRNATEAINLVAYTWGLANLKPGDE----VILSVAEHHSNIVPWQLVAQKTGAV 149 (424)
T ss_pred HHHHHHHHHHcCCC-----CCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCE----EEECCCccHHHHHHHHHHHHHcCCE
Confidence 68999999999861 3468999999999999998763 578888 99999988754 4455667999
Q ss_pred eeeecCCccc-cc-----c--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEE
Q 018172 111 LYKWDGDANT-FD-----K--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIM 181 (360)
Q Consensus 111 ~~~~~~~~~~-~~-----~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~ 181 (360)
++.++.+.++ ++ . ++++++|++++|+||||..++ +++.++|+++|+++++|++|..+..+......+.+++
T Consensus 150 v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~ 229 (424)
T PLN02855 150 LKFVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFL 229 (424)
T ss_pred EEEEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcCCCEE
Confidence 9988875432 22 1 468999999999999999999 6777888889999999999986544333345567899
Q ss_pred EeccccccCCCCceEEEEeecCHHHHHHHHHHH---------------------hhccccCChHHHHHHHHHhcccCCCc
Q 018172 182 LFTLSKCTGHAGSRIGWALVKDTEVARKMTRFI---------------------ELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 182 ~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~---------------------~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
+.|++|.+|++| +||++. ++++++.+.... .+...+.+.....++.++++.+.+
T Consensus 230 ~~s~~K~~gp~G--~G~l~~-~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~-- 304 (424)
T PLN02855 230 VASSHKMCGPTG--IGFLWG-KSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSE-- 304 (424)
T ss_pred EeecccccCCCc--cEEEEE-chhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHH--
Confidence 999999888666 899998 677776653221 111223444555566667765432
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhh-CeeeeCCC
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAE-RIMARGGR 317 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~-gI~~~pg~ 317 (360)
..+++++++..+.++++.+.|.+++++.+..+.... ....++++.+.+++ .+.+.+.|.++ ||.++.|.
T Consensus 305 -~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~-------~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~ 376 (424)
T PLN02855 305 -IGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSE-------GVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGH 376 (424)
T ss_pred -hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccc-------ccCcccEEEEEECCcCHHHHHHHhcccCCEEEechh
Confidence 467888899999999999999888766665442100 00123355566653 37788888777 99999876
Q ss_pred CC--------CCCCCeEEEEecC--ChHHHHHHHHHHHHHHhchh
Q 018172 318 RF--------GADAKYARVSMLS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 318 ~f--------~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
.+ +. ++++|+|+.. ++||+++++++|++++...+
T Consensus 377 ~c~~~~~~~~g~-~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 377 HCAQPLHRYLGV-NASARASLYFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred hhhHHHHHHhCC-CCeEEEEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence 43 22 4689999966 89999999999999987643
No 116
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.96 E-value=2.1e-27 Score=222.46 Aligned_cols=277 Identities=13% Similarity=0.090 Sum_probs=202.0
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
..++++.+++|++. + ++++++|+++++..++..++++||. |+++.+.|.+....++..|++++.++.+
T Consensus 53 ~~~~~e~lA~~~g~-------~-~~~i~~g~~~a~~~~~~~l~~~gd~----Vl~~~~~h~s~~~~~~~~g~~~~~~~~~ 120 (370)
T TIGR02539 53 IHDFLEDLAEFLGM-------D-EARVTHGAREGKFAVMHALCKEGDW----VVLDGLAHYTSYVAAERAGLNVKEVPHT 120 (370)
T ss_pred HHHHHHHHHHHhCC-------C-ceEEECChHHHHHHHHHHhhCCCCE----EEECCcccHHHHHHHHHcCCEEEEEecC
Confidence 37889999999995 2 5777999999999999999999998 9999899777777888899999988764
Q ss_pred c--------ccccc--C-------CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCcc
Q 018172 118 A--------NTFDK--N-------NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHD 179 (360)
Q Consensus 118 ~--------~~~~~--~-------~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~ 179 (360)
. +.+.. + +++++|++++|+||||...+ +++.++|+++|+++|+|++|..+..+......+.+
T Consensus 121 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~d 200 (370)
T TIGR02539 121 GHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGAD 200 (370)
T ss_pred CcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCC
Confidence 2 22211 1 26789999999999999988 67888899899999999999975433222234577
Q ss_pred EEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhcccc--------CChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 180 IMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIG--------VSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 180 i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
++++|+||+++ +|.|+||+++ ++++++.+.+.......+ .....+.++.+++... .+++++.++.+
T Consensus 201 i~v~s~sK~~~-~~g~~G~l~~-~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~----~~~l~~~~~~~ 274 (370)
T TIGR02539 201 FIVGSGHKSMA-ASGPCGVLGM-SEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHV----VERVKRWDEEV 274 (370)
T ss_pred EEEeeCccccc-CCCCEEEEEE-CHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 88999999999 6778999998 899999987765432221 1112444444445421 25555555555
Q ss_pred HHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-----------HHHHHHHHhhCee-eeCCCCC
Q 018172 252 SERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-----------EDCEKLLRAERIM-ARGGRRF 319 (360)
Q Consensus 252 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gI~-~~pg~~f 319 (360)
+.. +++.+.|++++ +.+..+. ++.++|++++++.. ..+.+.|+++||. +++
T Consensus 275 ~~~-~~l~~~L~~~g-~~~~~~~-----------~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~---- 337 (370)
T TIGR02539 275 KKT-RWFVAELEDIG-FIQLGQK-----------PKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRS---- 337 (370)
T ss_pred HHH-HHHHHHHHhCC-cEEEccC-----------CCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccC----
Confidence 554 58999999885 4331110 13345666665421 4588899999997 664
Q ss_pred CCCCCeEEEEecC-ChHHHHHHHHHHHHHHhc
Q 018172 320 GADAKYARVSMLS-REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 320 ~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~ 350 (360)
+. ++++|+++.. ++|++++++++|++++.+
T Consensus 338 ~~-~~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 338 GQ-TKYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred Cc-ceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 22 5699999633 999999999999998754
No 117
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.96 E-value=3.5e-27 Score=224.78 Aligned_cols=300 Identities=11% Similarity=0.062 Sum_probs=212.8
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|++..|+ ++||++++++++. .++++|+|++++++.++.+++++|| |++++|.|..+...+
T Consensus 72 ~~Y~~~~g~-----~~Lreaia~~~~~--------~~vv~t~ggt~A~~~~~~all~pGD-----Vii~~p~~~~~~~~i 133 (460)
T PRK13238 72 EAYAGSRSY-----YRLEDAVKDIFGY--------PYTIPTHQGRAAEQILFPVLIKKGD-----VVPSNYHFDTTRAHI 133 (460)
T ss_pred cccCCCCCH-----HHHHHHHHHHhCC--------CcEEECCCHHHHHHHHHHHhCCCCC-----EEccCCcccchHHHH
Confidence 469999998 9999999999984 3799999999999999999999998 889999999999999
Q ss_pred HHhCCeeeeecCCc-------cccc----c-------C----CCeeEEEEcCCCCCCc-ccch----HHHHHHhhhcCcE
Q 018172 105 DYLRSGLYKWDGDA-------NTFD----K-------N----NGAYIEVVNSPNNPDG-TIRE----AVLAKVNRSAEGK 157 (360)
Q Consensus 105 ~~~g~~~~~~~~~~-------~~~~----~-------~----~~~~~i~~~~p~NPtG-~~~~----~~~~~~~~~~~~~ 157 (360)
...|++++.++++. +.+. . + +++++|++++|||||| .+++ +.+.++|+++|++
T Consensus 134 ~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~ 213 (460)
T PRK13238 134 ELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIP 213 (460)
T ss_pred HHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 99999999887753 1221 1 1 3699999999999998 7877 3567889999999
Q ss_pred EEEeecccCCCC--C-----cCC--CCCCccEEEeccccccCCCCceE------EEEeecCHHHHHHHHHHH----hhcc
Q 018172 158 LIHDLAYYWPQY--T-----PIT--GAADHDIMLFTLSKCTGHAGSRI------GWALVKDTEVARKMTRFI----ELGS 218 (360)
Q Consensus 158 li~D~ay~~~~~--~-----~~~--~~~~~~i~~~S~sK~~~~~G~r~------G~~~~~~~~~~~~l~~~~----~~~~ 218 (360)
+|+|+++...+. . ... ...+-...++|++|++.++|+|+ |+++++++++.+.++... .+.+
T Consensus 214 li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t 293 (460)
T PRK13238 214 VVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPT 293 (460)
T ss_pred EEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcceeEEEcChHHHHHHhhhcccccCCccc
Confidence 999997753111 0 000 00001122345555555555553 577764478888887663 2334
Q ss_pred ccC-ChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC
Q 018172 219 IGV-SKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK 297 (360)
Q Consensus 219 ~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (360)
++. +...|.+++..+....+. .+.+.. .++++++.+.|++. ++.+..|.|+++.|.+.... .+..-.-..+
T Consensus 294 ~~g~~~~~~~Ala~~l~e~~~~--~~~~~~----~~~~~~l~~~L~~~-G~~~~~p~Gg~~v~~d~~~~-~~~~~~~~~~ 365 (460)
T PRK13238 294 YGGLAGRDMEALAVGLYEGMDE--DYLAYR----IGQVEYLGEGLEEA-GVPIQTPAGGHAVFVDAGKF-LPHIPAEQFP 365 (460)
T ss_pred ccCcHHHHHHHHHhhHHHhhCh--HHHHHH----HHHHHHHHHHHHHC-CCCeEccCCceEEEEEchhc-CCCCCCCCCc
Confidence 444 445577777766632222 334333 33579999999887 67888899998766543110 0000000112
Q ss_pred chHHHHHHHHhhCeeeeCCCCCCC------------CCCeEEEEecC---ChHHHHHHHHHHHHHHhc
Q 018172 298 EDEDCEKLLRAERIMARGGRRFGA------------DAKYARVSMLS---REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 298 ~~~~~~~~l~~~gI~~~pg~~f~~------------~~~~~R~s~~~---~~e~~~~~~~~l~~~~~~ 350 (360)
+.+++..++++.||.+.|+..|.. ...++||++.. +.+.++.+.++|+++.++
T Consensus 366 ~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 366 AQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred hHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 337889999999999999887732 13689999988 999999999999998854
No 118
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.3e-26 Score=216.60 Aligned_cols=286 Identities=17% Similarity=0.142 Sum_probs=228.8
Q ss_pred cHHHHHHHHHHHhhcCCCCCC-CCcEEEcCChHHHHHHHHHhh---cCCCCCCCceEEEeCCCCCCcHHH----HHHhCC
Q 018172 38 VPELAEAINNLHHVVDNAVSD-GRHIVIGTGSTQLYQAALYAL---SSPGGPEPISVVSAAPYYSQYPAE----TDYLRS 109 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~-~~~i~~t~G~t~~l~~~~~~l---~~~gd~~~~~vl~~~p~~~~~~~~----~~~~g~ 109 (360)
+++.|+.+++|++. + .++|++|.|+|++++++..++ ..+||+ |++++-.|++.... .+..|+
T Consensus 68 ~e~aRe~va~~~~a------~~~~eIvft~~tT~aln~va~~l~~~~~~gde----Iv~s~~EH~sn~~pw~~~~~~~Ga 137 (405)
T COG0520 68 YEAAREAVARFLNA------DSSDEIVFTRGTTEALNLVARGLGRSLKPGDE----IVVSDLEHHSNIVPWQELAKRTGA 137 (405)
T ss_pred HHHHHHHHHHHhCC------CCCCeEEEeCChhHHHHHHHHHhhhhhcCCCE----EEEccCcchhhHHHHHHHHHhcCc
Confidence 38899999999997 4 478999999999999999999 688998 99999888866544 444589
Q ss_pred eeeeecCCccccc--------cCCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccE
Q 018172 110 GLYKWDGDANTFD--------KNNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDI 180 (360)
Q Consensus 110 ~~~~~~~~~~~~~--------~~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i 180 (360)
+++.++++.++.. .+++||+|.+++.+|.||.+.+ +++.++|+++|+++++|.+++.++.+......+.++
T Consensus 138 ~v~~i~~~~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~Df 217 (405)
T COG0520 138 KVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCDF 217 (405)
T ss_pred EEEEEecCCCCCcCHHHHHHhcCCCceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhcCCCE
Confidence 9999998744332 2588999999999999999999 788888999999999999999999888889999999
Q ss_pred EEecccc-ccCCCCceEEEEeecCHHHHHHHHHHH----------------------hhccccCChHHHHHHHHHhcccC
Q 018172 181 MLFTLSK-CTGHAGSRIGWALVKDTEVARKMTRFI----------------------ELGSIGVSKESQLRAAKILGIVS 237 (360)
Q Consensus 181 ~~~S~sK-~~~~~G~r~G~~~~~~~~~~~~l~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~~ 237 (360)
+++|.+| .+|++| +|.+.+ .+++.+.+.... .+...+++.....++.++++.+.
T Consensus 218 ~afsgHKwl~gP~G--iGvLy~-r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~ 294 (405)
T COG0520 218 LAFSGHKWLLGPTG--IGVLYV-RKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLL 294 (405)
T ss_pred EEEcccccccCCCc--eEEEEE-chHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHH
Confidence 9999999 888667 888888 788888873221 11222345555556666777654
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeC
Q 018172 238 DDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARG 315 (360)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~p 315 (360)
. ..++++.++.++..+++.+.|++++++.+..+... .....+.+.++. ..++...|.++||.++.
T Consensus 295 ~---ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~----------~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~ 361 (405)
T COG0520 295 E---IGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDA----------DRGGIVSFNVKGIHPHDVATLLDEKGIAVRA 361 (405)
T ss_pred H---HhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcc----------cCceEEEEEeCCCCHHHHHHHHHhCCeEEEe
Confidence 3 55889999999999999999999998888776530 122244555554 39999999999999999
Q ss_pred CCCCCC-------CCCeEEEEecC--ChHHHHHHHHHHHHHHh
Q 018172 316 GRRFGA-------DAKYARVSMLS--REEIFNIFLERLSAIQG 349 (360)
Q Consensus 316 g~~f~~-------~~~~~R~s~~~--~~e~~~~~~~~l~~~~~ 349 (360)
|..+.. .+..+|+|+.. ++||+++++++|+++..
T Consensus 362 g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 362 GHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred ccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 865531 13459999977 99999999999999865
No 119
>PRK07049 methionine gamma-lyase; Validated
Probab=99.96 E-value=1.5e-26 Score=219.17 Aligned_cols=294 Identities=12% Similarity=0.140 Sum_probs=206.6
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
+++|+++. ...|+++++++.+. + ++++++|+++++..++.+++++||+ |++++|+|+.+...
T Consensus 77 y~R~~~Pt------~~~Le~~lA~leg~-------~-~~iv~~sG~~Ai~~~l~al~~~Gd~----Vv~~~p~Y~~~~~~ 138 (427)
T PRK07049 77 YSRFNHPN------SEIVEDRLAVYEGA-------E-SAALFSSGMSAIATTLLAFVRPGDV----ILHSQPLYGGTETL 138 (427)
T ss_pred ccCCCCcC------HHHHHHHHHHHhCC-------C-cEEEEccHHHHHHHHHHHHhCCCCE----EEEcCCCcccHHHH
Confidence 35566555 38999999999983 4 5888888889999999999999998 99999999999776
Q ss_pred H----HHhCCeeeeecC--Ccccccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhh------cCcEEEEeec
Q 018172 104 T----DYLRSGLYKWDG--DANTFDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRS------AEGKLIHDLA 163 (360)
Q Consensus 104 ~----~~~g~~~~~~~~--~~~~~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~------~~~~li~D~a 163 (360)
+ ...|++++.++. |.+.++. .+++++|++++||||||.+++ +.+.+++++ +++++|+|++
T Consensus 139 ~~~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDet 218 (427)
T PRK07049 139 LAKTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNT 218 (427)
T ss_pred HHHHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECC
Confidence 4 456998777752 2222221 257899999999999999999 556666654 6899999999
Q ss_pred ccCCC-CCcCCCCCCccEEEeccccccC-CCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCch
Q 018172 164 YYWPQ-YTPITGAADHDIMLFTLSKCTG-HAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 164 y~~~~-~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
|..+. ..++ ..+.++++.|+||.++ .+|+|+||+++ ++++++.+...+...+.+.+++.|.++...++
T Consensus 219 y~~~~~~~pl--~~g~divv~S~SK~~gG~~glr~G~vv~-~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~------- 288 (427)
T PRK07049 219 LLGPVFQKPL--EHGADLSVYSLTKYVGGHSDLVAGAVLG-RKALIRQVRALRSAIGTQLDPHSCWMLGRSLE------- 288 (427)
T ss_pred ccccccCCcc--ccCCCEEEEcCceeecCCCCcEEEEEEC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCC-------
Confidence 87532 2222 3467899999999999 69999999998 78999999988877777888898888876554
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCc---c---cccccccCCCCCCcccccCCch-HHHHHHHHhhCeeee
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLE---Y---CNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMAR 314 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~ 314 (360)
.. ....++..++++.+.+.|++++.+..+.+++. . +.+......+.+..+.+.++++ +.+.+.+.+-.+..
T Consensus 289 tl-~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~- 366 (427)
T PRK07049 289 TL-VLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQAAAFRFLNALQIFK- 366 (427)
T ss_pred hH-HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCHHHHHHHHHcCcccE-
Confidence 33 33345558899999999999987766544432 1 1111111224455677887644 44444443334332
Q ss_pred CCCCC--------------------------CCCCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 315 GGRRF--------------------------GADAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 315 pg~~f--------------------------~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
.+..+ |..++.+|||++.+ +.+.+++.|.+.++
T Consensus 367 ~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE--~~~dl~~dl~~al~ 425 (427)
T PRK07049 367 LAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGIE--HPDDLIADLAQALD 425 (427)
T ss_pred EcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCcC--CHHHHHHHHHHHHh
Confidence 11112 12256799999662 24455666666554
No 120
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.96 E-value=2.4e-26 Score=214.52 Aligned_cols=285 Identities=13% Similarity=0.085 Sum_probs=207.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCC--cHHHHHHhCCeeeeecC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQ--YPAETDYLRSGLYKWDG 116 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~--~~~~~~~~g~~~~~~~~ 116 (360)
+++|+.++++++. .+++.+++++|+++++..++.+++++|++ |+++.++|.+ +...++..|++++.++.
T Consensus 35 ~~~~~~la~~~g~-----~~~~~~~~~~~~t~al~~~~~~~~~~g~~----vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 105 (356)
T cd06451 35 DEILEGLRYVFQT-----ENGLTFLLSGSGTGAMEAALSNLLEPGDK----VLVGVNGVFGDRWADMAERYGADVDVVEK 105 (356)
T ss_pred HHHHHHHHHHhcC-----CCCCEEEEecCcHHHHHHHHHHhCCCCCE----EEEecCCchhHHHHHHHHHhCCCeEEeec
Confidence 7899999999985 13345788888999999999999999998 9999888775 45678888999998876
Q ss_pred Ccc------cccc--CC-CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccc
Q 018172 117 DAN------TFDK--NN-GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLS 186 (360)
Q Consensus 117 ~~~------~~~~--~~-~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~s 186 (360)
+.+ .+.. ++ ++++|++++|+||||.+++ +.+.++|+++|+++++|++|..+..+......+.++++.|.+
T Consensus 106 ~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~ 185 (356)
T cd06451 106 PWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQ 185 (356)
T ss_pred CCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccccccCccEEEecCc
Confidence 643 2211 34 7899999999999999988 677788888999999999987544332223345678889999
Q ss_pred cccCCCCceEEEEeecCHHHHHHHHH---HH----------h------hccccCChHHHHHHHHHhcccCCCchhHHHHH
Q 018172 187 KCTGHAGSRIGWALVKDTEVARKMTR---FI----------E------LGSIGVSKESQLRAAKILGIVSDDYPNFFEYG 247 (360)
Q Consensus 187 K~~~~~G~r~G~~~~~~~~~~~~l~~---~~----------~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (360)
|.++.| .++||++. ++++++.+.. .. . ....+.+...+.++.++++.+.. ..+++.
T Consensus 186 K~l~~p-~g~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~---~~~~~~ 260 (356)
T cd06451 186 KALGAP-PGLGPIAF-SERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILE---EGLENR 260 (356)
T ss_pred hhccCC-CCcceeEE-CHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHH---hhHHHH
Confidence 999843 46899998 7888877753 00 0 12223445555666666664432 556778
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhh-CeeeeCCCCCCCCC
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAE-RIMARGGRRFGADA 323 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~-gI~~~pg~~f~~~~ 323 (360)
.++.+++++++.+.|.+. ++.+..+... ..+.++|+..+. ...+.+.|.++ ||.+++|..+. .+
T Consensus 261 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~~~-~~ 328 (356)
T cd06451 261 WARHRRLAKALREGLEAL-GLKLLAKPEL----------RSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGPT-AG 328 (356)
T ss_pred HHHHHHHHHHHHHHHHHc-CCeeccCccc----------CCCceEEEECCCCCCHHHHHHHHHHhCCEEEecccccc-cC
Confidence 888899999999999887 3444322111 111234555543 26777888887 99999987543 25
Q ss_pred CeEEEEecC--ChHHHHHHHHHHHHHHh
Q 018172 324 KYARVSMLS--REEIFNIFLERLSAIQG 349 (360)
Q Consensus 324 ~~~R~s~~~--~~e~~~~~~~~l~~~~~ 349 (360)
+++|+|++. ++|++++++++|.++++
T Consensus 329 ~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 329 KVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 699999965 89999999999998763
No 121
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.96 E-value=1.5e-26 Score=216.09 Aligned_cols=271 Identities=16% Similarity=0.110 Sum_probs=201.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC-C
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG-D 117 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~-~ 117 (360)
.+++++++++++. +++|++++|+++.+ .++..++++||+ |++++|+|..+...++..|.+++.++. |
T Consensus 64 ~~l~~~la~~~~~-------~~~i~~~~G~~~~~-~~l~~~~~~gd~----v~~~~~~~~~~~~~~~~~g~~~~~~~~~d 131 (360)
T TIGR00858 64 EELEEELAEWKGT-------EAALLFSSGYLANV-GVISALVGKGDL----ILSDALNHASLIDGCRLSGARVRRYRHND 131 (360)
T ss_pred HHHHHHHHHHhCC-------CCEEEECchHHHHH-HHHHHhCCCCCE----EEEEccccHHHHHHHHhcCCceEEecCCC
Confidence 6799999999873 35788888865554 567788899998 999999999999999999999887763 3
Q ss_pred cccccc----C--CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCc-------CC--CCCCccEE
Q 018172 118 ANTFDK----N--NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTP-------IT--GAADHDIM 181 (360)
Q Consensus 118 ~~~~~~----~--~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~-------~~--~~~~~~i~ 181 (360)
.+.+.. . +++++|++.+++||||...+ +.+.++|+++++++|+||+|..+.+.. .. ...+++++
T Consensus 132 ~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 211 (360)
T TIGR00858 132 VEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQ 211 (360)
T ss_pred HHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEE
Confidence 333322 1 35788999999999998877 678888998999999999997532211 11 12467999
Q ss_pred EeccccccCCCCceEEEEeecCHHHHHHHHHHHhhc--cccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHH
Q 018172 182 LFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELG--SIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLR 259 (360)
Q Consensus 182 ~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 259 (360)
+.||||.|+++| ||+++ ++++++.+....... +.+.+...+.++.++++.. ...++.+++++++++++.
T Consensus 212 i~s~sK~~~~~g---G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-----~~~~~~~~~~~~~~~~l~ 282 (360)
T TIGR00858 212 VGTLSKALGSYG---AYVAG-SQALIDYLINRARTLIFSTALPPAVAAAALAALELI-----QEEPWRREKLLALIARLR 282 (360)
T ss_pred EEechhhhhccC---cEEEc-CHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH-----hhCHHHHHHHHHHHHHHH
Confidence 999999999777 99998 888888886543322 2234445444555566532 223567899999999999
Q ss_pred HHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCC--CCCeEEEEecC--
Q 018172 260 QVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGA--DAKYARVSMLS-- 332 (360)
Q Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~--~~~~~R~s~~~-- 332 (360)
+.|++++ +.+. + +.++|+|+.++.. ..+.+.|.++||.+.++..++. ..+++|+++..
T Consensus 283 ~~L~~~~-~~~~-~-------------~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~ 347 (360)
T TIGR00858 283 AGLEALG-FTLM-P-------------SCTPIVPVIIGDNASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAH 347 (360)
T ss_pred HHHHHcC-CccC-C-------------CCCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCC
Confidence 9999874 3332 2 2234778887642 5677888889999998766542 34689999975
Q ss_pred ChHHHHHHHHHHH
Q 018172 333 REEIFNIFLERLS 345 (360)
Q Consensus 333 ~~e~~~~~~~~l~ 345 (360)
+++++++++++|+
T Consensus 348 ~~~~i~~~l~~l~ 360 (360)
T TIGR00858 348 TPGDIDRLAEALK 360 (360)
T ss_pred CHHHHHHHHHhhC
Confidence 9999999999873
No 122
>PRK02948 cysteine desulfurase; Provisional
Probab=99.95 E-value=5.4e-27 Score=220.84 Aligned_cols=287 Identities=11% Similarity=0.048 Sum_probs=208.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc----CCCCCCCceEEEeCCCCCCcHHH---HHHhCCee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS----SPGGPEPISVVSAAPYYSQYPAE---TDYLRSGL 111 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~----~~gd~~~~~vl~~~p~~~~~~~~---~~~~g~~~ 111 (360)
+++|+.++++++. ++++|++|+|+++++..++..+. ++|+. |+++...|+.+... ++..|+++
T Consensus 46 ~~~r~~la~~~g~------~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~----vv~~~~~h~s~~~~~~~~~~~g~~v 115 (381)
T PRK02948 46 QVCRKTFAEMIGG------EEQGIYFTSGGTESNYLAIQSLLNALPQNKKH----IITTPMEHASIHSYFQSLESQGYTV 115 (381)
T ss_pred HHHHHHHHHHhCC------CCCeEEEeCcHHHHHHHHHHHHHHhccCCCCE----EEECCcccHHHHHHHHHHHhCCCEE
Confidence 7899999999986 56789999999999999888875 45776 99998777766544 55679999
Q ss_pred eeecCCccc------ccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEE
Q 018172 112 YKWDGDANT------FDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIML 182 (360)
Q Consensus 112 ~~~~~~~~~------~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~ 182 (360)
+.++.+.++ +.. ++++++|++++|+||||.+++ +.+.++|+++|+++++|+++..+..+......+.++++
T Consensus 116 ~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~ 195 (381)
T PRK02948 116 TEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLS 195 (381)
T ss_pred EEEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccCCCCEEE
Confidence 988876432 211 357899999999999999999 67778888899999999887765544444566789999
Q ss_pred eccccccCCCCceEEEEeecCHHH-HHHHHH----HHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHH
Q 018172 183 FTLSKCTGHAGSRIGWALVKDTEV-ARKMTR----FIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNM 257 (360)
Q Consensus 183 ~S~sK~~~~~G~r~G~~~~~~~~~-~~~l~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 257 (360)
.|+||.+|++| +|++++ ++++ ...+.. ...+...+.|.+.+.++.++++... +++++.++++++.+++
T Consensus 196 ~s~~K~~gp~G--~G~l~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~----~~~~~~~~~~~~~~~~ 268 (381)
T PRK02948 196 VSAHKIYGPKG--VGAVYI-NPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENIL----KNMQEESLRFKELRSY 268 (381)
T ss_pred ecHHhcCCCCc--EEEEEE-cCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 99999999888 788887 4432 111110 0112456788889988888887432 5688889999999999
Q ss_pred HHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC--chHHHHHHHHhhCeeeeCCCCC--------------CC
Q 018172 258 LRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--EDEDCEKLLRAERIMARGGRRF--------------GA 321 (360)
Q Consensus 258 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gI~~~pg~~f--------------~~ 321 (360)
+.+.|++++ +.+....... + ..+..+.+.++ +.+.+...|.++||.+++|..+ +.
T Consensus 269 l~~~L~~~~-~~v~~~~~~~--~------~~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~ 339 (381)
T PRK02948 269 FLEQIQTLP-LPIEVEGHST--S------CLPHIIGVTIKGIEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGK 339 (381)
T ss_pred HHHHHhcCC-CCEEEeCCCc--c------CcCCEEEEEeCCCCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCC
Confidence 999999884 2222110010 0 01112222223 2355666778899999988742 11
Q ss_pred ----CCCeEEEEecC--ChHHHHHHHHHHHHHHhch
Q 018172 322 ----DAKYARVSMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 322 ----~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
..+++|+|+.. ++||+++++++|+++++..
T Consensus 340 ~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 375 (381)
T PRK02948 340 TYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQF 375 (381)
T ss_pred ChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 14689999965 9999999999999988764
No 123
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=1.3e-26 Score=204.25 Aligned_cols=316 Identities=18% Similarity=0.180 Sum_probs=226.9
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHhhcCC-CCCCCCcEEEcCChHHHHHHHHHhhcCC-CCCCCceEEEeCCCCCCc
Q 018172 23 LMSYLSDMGNVCWFLVPELAEAINNLHHVVDN-AVSDGRHIVIGTGSTQLYQAALYALSSP-GGPEPISVVSAAPYYSQY 100 (360)
Q Consensus 23 ~~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~-~~~~~~~i~~t~G~t~~l~~~~~~l~~~-gd~~~~~vl~~~p~~~~~ 100 (360)
....|+++.|+ +-+|+.+|+|+.+++. +.++ ++|++|+|++.++..++..++.. .+. |++|.|.|+-|
T Consensus 105 s~GaYS~SqGv-----~~vR~~VA~~I~rRDG~p~~p-~dI~LT~GAS~ai~~il~l~~~~~~~G----vliPiPQYPLY 174 (475)
T KOG0258|consen 105 SLGAYSDSQGV-----PGVRKHVAEFIERRDGIPADP-EDIFLTTGASPAIRSILSLLIAGKKTG----VLIPIPQYPLY 174 (475)
T ss_pred cccccccccCC-----hhHHHHHHHHHHhccCCCCCH-HHeeecCCCcHHHHHHHHHHhcCCCCc----eEeecCCCchh
Confidence 45669999998 9999999999987754 4555 58999999999999999988643 343 99999999999
Q ss_pred HHHHHHhCCeeeeecCCcc--------cccc-------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEe
Q 018172 101 PAETDYLRSGLYKWDGDAN--------TFDK-------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHD 161 (360)
Q Consensus 101 ~~~~~~~g~~~~~~~~~~~--------~~~~-------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D 161 (360)
-..+.++|...+..-+|.+ .+.. .-+++++++.||-||||.++++ .+..+|.+++++++.|
T Consensus 175 sAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaD 254 (475)
T KOG0258|consen 175 SATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLAD 254 (475)
T ss_pred HHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEech
Confidence 9999999998886655532 2222 2378999999999999999994 4556778899999999
Q ss_pred ecccCCCCCcC------C------C-CC-Cc--cEEEecccccc-CCCCceEEEEee--cCHHHHHHHHHHHhhccccCC
Q 018172 162 LAYYWPQYTPI------T------G-AA-DH--DIMLFTLSKCT-GHAGSRIGWALV--KDTEVARKMTRFIELGSIGVS 222 (360)
Q Consensus 162 ~ay~~~~~~~~------~------~-~~-~~--~i~~~S~sK~~-~~~G~r~G~~~~--~~~~~~~~l~~~~~~~~~~~~ 222 (360)
|+|.+.-+.+. . + .. ++ .+.++|.||.+ |=.|-|.||.-. .+++..+.+.+... ...+.+
T Consensus 255 EVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~s-i~lc~~ 333 (475)
T KOG0258|consen 255 EVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLAS-IKLCPQ 333 (475)
T ss_pred HHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHh-hhhcCC
Confidence 99985322221 1 1 11 23 24577889966 458999999643 35777777776654 467788
Q ss_pred hHHHHHHHHHhcccCCC------chhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCccc--c
Q 018172 223 KESQLRAAKILGIVSDD------YPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAW--L 294 (360)
Q Consensus 223 ~~~~~~~~~~l~~~~~~------~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 294 (360)
...|...-..++..... +......+...++.|...+.+.+++++++.+..++|++|+|.-+..+..+.=.- .
T Consensus 334 V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~ 413 (475)
T KOG0258|consen 334 VSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAAKAL 413 (475)
T ss_pred ccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHHHHHHHHHh
Confidence 88888877766644321 225555677788999999999999999999999999998876332222110000 0
Q ss_pred -cCCchHHHHHHHHhhCeeeeCCCCCCCCCC--eEEEEecCCh-HHHHHHHHHHHHHHh
Q 018172 295 -ESKEDEDCEKLLRAERIMARGGRRFGADAK--YARVSMLSRE-EIFNIFLERLSAIQG 349 (360)
Q Consensus 295 -~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~--~~R~s~~~~~-e~~~~~~~~l~~~~~ 349 (360)
..||.--+.++|++.||.++||+.||..+| ++|.++-... +.++++-+.-.+++.
T Consensus 414 ~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~~~~i~~~~~fH~~f~~ 472 (475)
T KOG0258|consen 414 GIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPGLEIIEKFKKFHAEFMD 472 (475)
T ss_pred CCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCchhHHHHHHHHHHHHHHH
Confidence 001213468899999999999999997444 6899885532 444444444444443
No 124
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.95 E-value=3.1e-26 Score=216.56 Aligned_cols=276 Identities=14% Similarity=0.121 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeec-CC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWD-GD 117 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~-~~ 117 (360)
.+||++++++++. + ++++++|+++++..++.+++++||+ |++++|+|+++...++..+.+.+.+. .|
T Consensus 86 ~~le~~ia~~~g~-------~-~~ii~~~~~~a~~~~~~~l~~~gd~----vi~~~~~~~s~~~~~~~~~~~~~~~~~~d 153 (393)
T TIGR01822 86 KELEAKIAAFLGT-------E-DTILYASCFDANGGLFETLLGAEDA----IISDALNHASIIDGVRLCKAKRYRYANND 153 (393)
T ss_pred HHHHHHHHHHhCC-------C-cEEEECchHHHHHHHHHHhCCCCCE----EEEeccccHHHHHHHHhcCCceEEeCCCC
Confidence 8899999999995 3 5777788899999999999999998 99999999999998888887765543 34
Q ss_pred cccccc--------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC----c---CCC-CCCccE
Q 018172 118 ANTFDK--------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT----P---ITG-AADHDI 180 (360)
Q Consensus 118 ~~~~~~--------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~----~---~~~-~~~~~i 180 (360)
.+.++. ..++++|++++++||||.+.+ +.+.++|+++|+++|+|++|..+... . ..+ ..+.++
T Consensus 154 ~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di 233 (393)
T TIGR01822 154 MADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDI 233 (393)
T ss_pred HHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeE
Confidence 443322 127889999999999999988 67888899999999999999643211 1 112 235679
Q ss_pred EEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhc--cccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELG--SIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
+++|+||.++ |+|+||+++ ++++++.+....... +.+.++..+.++.++++.+ ...++.+++++++++++
T Consensus 234 ~~~s~sK~l~--g~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~-----~~~~~~~~~~~~~~~~l 305 (393)
T TIGR01822 234 ITGTLGKALG--GASGGFTTA-RKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEML-----EASNELRDRLWANTRYF 305 (393)
T ss_pred EEEEChHHhh--CCCcEEEEe-CHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH-----hcCHHHHHHHHHHHHHH
Confidence 9999999865 689999998 899999887643222 2223444444555555532 23467788999999999
Q ss_pred HHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhhCeeeeCCCCCCC---CCCeEEEEecC
Q 018172 259 RQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERIMARGGRRFGA---DAKYARVSMLS 332 (360)
Q Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~pg~~f~~---~~~~~R~s~~~ 332 (360)
.+.|++. ++.+..+.+ .++.+.+++ ...+.+.|.++||.+. +..|.. ....+|+|++.
T Consensus 306 ~~~L~~~-g~~~~~~~~--------------~~~~i~~~~~~~~~~l~~~L~~~gI~v~-~~~~~~~~~~~~~iRis~~~ 369 (393)
T TIGR01822 306 RERMEAA-GFDIKPADH--------------PIIPVMLYDAVLAQRFARRLLEEGIYVT-GFFYPVVPKGQARIRVQISA 369 (393)
T ss_pred HHHHHHc-CCCCCCCCC--------------CEEEEEeCCHHHHHHHHHHHHHCCeeEe-eeCCCCCCCCCceEEEEECC
Confidence 9999886 344332221 133344433 2556667778899997 444531 23469988865
Q ss_pred --ChHHHHHHHHHHHHHHhc
Q 018172 333 --REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 333 --~~e~~~~~~~~l~~~~~~ 350 (360)
+++++++++++|.++.++
T Consensus 370 ~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 370 AHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 899999999999998754
No 125
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.95 E-value=1.3e-26 Score=217.69 Aligned_cols=280 Identities=15% Similarity=0.100 Sum_probs=207.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC---CCCCCCceEEEeCCCCCCcH----HHHHHhCCee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS---PGGPEPISVVSAAPYYSQYP----AETDYLRSGL 111 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~---~gd~~~~~vl~~~p~~~~~~----~~~~~~g~~~ 111 (360)
.++|+.++++++.. +++++++|+|++++++.++.++.. +|++ |++++++|+... ..++..|+++
T Consensus 46 ~~~~~~la~~~~~~-----~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~----vl~~~~~~~~~~~~~~~~~~~~g~~~ 116 (373)
T cd06453 46 EAAREKVARFINAP-----SPDEIIFTRNTTEAINLVAYGLGRANKPGDE----IVTSVMEHHSNIVPWQQLAERTGAKL 116 (373)
T ss_pred HHHHHHHHHHhCCC-----CCCeEEEeCCHHHHHHHHHHHhhhcCCCCCE----EEECcchhHHHHHHHHHHHhhcCcEE
Confidence 78999999999851 256899999999999999999977 7887 999999998853 3445679999
Q ss_pred eeecCCccc------ccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEE
Q 018172 112 YKWDGDANT------FDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIML 182 (360)
Q Consensus 112 ~~~~~~~~~------~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~ 182 (360)
+.++.+.++ +.. ++++++|++++|+||||...+ +.+.++|+++|+++++|++|..+..+......+.++++
T Consensus 117 ~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~ 196 (373)
T cd06453 117 KVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLA 196 (373)
T ss_pred EEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEE
Confidence 988876432 221 458899999999999999988 67888888899999999999865443223345678899
Q ss_pred eccccccCCCCceEEEEeecCHHHHHHHHHHHh---------------------hccccCChHHHHHHHHHhcccCCCch
Q 018172 183 FTLSKCTGHAGSRIGWALVKDTEVARKMTRFIE---------------------LGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 183 ~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~---------------------~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
+|++|.++. .++|++++ ++++++.+..... +...+.+.....++.++++.+.+
T Consensus 197 ~s~~K~~~~--~g~g~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~--- 270 (373)
T cd06453 197 FSGHKMLGP--TGIGVLYG-KEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEK--- 270 (373)
T ss_pred eccccccCC--CCcEEEEE-chHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHH---
Confidence 999999985 55899998 7888877764321 11123444555555556665433
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch--HHHHHHHHhhCeeeeCCCCC
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED--EDCEKLLRAERIMARGGRRF 319 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~gI~~~pg~~f 319 (360)
..+++++++.+++++++.+.|++++++.+..+.. ..++++++.+++. +.+.+.|.++||.+.+|..+
T Consensus 271 ~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~~l~~~gi~i~~g~~~ 339 (373)
T cd06453 271 IGMEAIAAHEHELTAYALERLSEIPGVRVYGDAE-----------DRAGVVSFNLEGIHPHDVATILDQYGIAVRAGHHC 339 (373)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCcc-----------ccCCeEEEEECCcCHHHHHHHHHHCCEEeccCccc
Confidence 3457788888899999999999987666542211 1233556666542 77888888999999887643
Q ss_pred CC-------CCCeEEEEecC--ChHHHHHHHHHH
Q 018172 320 GA-------DAKYARVSMLS--REEIFNIFLERL 344 (360)
Q Consensus 320 ~~-------~~~~~R~s~~~--~~e~~~~~~~~l 344 (360)
.. .++++|+|+.. +++++++++++|
T Consensus 340 ~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 340 AQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred hhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 21 25799999975 999999999864
No 126
>PLN02822 serine palmitoyltransferase
Probab=99.95 E-value=3.3e-26 Score=219.90 Aligned_cols=278 Identities=11% Similarity=0.081 Sum_probs=208.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC-
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD- 117 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~- 117 (360)
.+|+++++++++. ++.|++++|.+ ++..++.++.++||. |++....|.++...+...|.+++.++.+
T Consensus 157 ~~Lee~La~~~~~-------~~~i~~s~G~~-a~~sai~a~~~~gd~----Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd 224 (481)
T PLN02822 157 LDCETKIAKFLGT-------PDSILYSYGLS-TIFSVIPAFCKKGDI----IVADEGVHWGIQNGLYLSRSTIVYFKHND 224 (481)
T ss_pred HHHHHHHHHHhCC-------CCEEEECCHHH-HHHHHHHHhCCCCCE----EEEeCCccHHHHHHHHHcCCeEEEECCCC
Confidence 9999999999983 46899998877 568899999999997 8888888888878888889999888754
Q ss_pred cccccc-------C----CCe-eEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC-------cCCC--C
Q 018172 118 ANTFDK-------N----NGA-YIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT-------PITG--A 175 (360)
Q Consensus 118 ~~~~~~-------~----~~~-~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~-------~~~~--~ 175 (360)
.+++.. + +++ ++|++..++|+||.+.+ +.+.++|++|++++|+||+|+.+.+. ...+ .
T Consensus 225 ~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~ 304 (481)
T PLN02822 225 MESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPI 304 (481)
T ss_pred HHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCC
Confidence 323322 1 234 78899999999999999 78888999999999999999843221 1111 1
Q ss_pred CCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCC--hHHHHHHHHHhcccCCCchhHHHHHHHHHHH
Q 018172 176 ADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVS--KESQLRAAKILGIVSDDYPNFFEYGRRLMSE 253 (360)
Q Consensus 176 ~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 253 (360)
.+.++++.||||++|++| ||+++ +.++++.++.......++.+ +..+.++.++++.+. ...+.++++++
T Consensus 305 ~~~dii~~s~sKalg~~G---G~i~g-~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~-----~~~~~~~~l~~ 375 (481)
T PLN02822 305 EKIDIITAAMGHALATEG---GFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE-----DNPSVLAKLKE 375 (481)
T ss_pred CCCeEEEecchhhhhhCC---eEEEc-CHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHH-----hCHHHHHHHHH
Confidence 356799999999999899 99998 89999998865544455544 667777777776432 22578889999
Q ss_pred HHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-------h-----HHHHHHHHhhCeeeeCC--CCC
Q 018172 254 RWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-------D-----EDCEKLLRAERIMARGG--RRF 319 (360)
Q Consensus 254 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~~~l~~~gI~~~pg--~~f 319 (360)
+++++.+.|++..++.+..+.++. ++++.+++ . +.+.++|.++||.+.|+ ..|
T Consensus 376 ~~~~l~~~L~~~~g~~~~~~~~sp-------------i~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~ 442 (481)
T PLN02822 376 NIALLHKGLSDIPGLSIGSNTLSP-------------IVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTL 442 (481)
T ss_pred HHHHHHHHHHhcCCcccCCCCCCC-------------EEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCc
Confidence 999999999987666655444444 44444431 1 33445556889999986 334
Q ss_pred CC--CCCeEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 320 GA--DAKYARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 320 ~~--~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
+. .+.++|++++. ++|++++++++|++++..
T Consensus 443 ~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 443 DKCRLPVGIRLFVSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred CCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 32 24579998864 999999999999998765
No 127
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.95 E-value=5.2e-26 Score=212.52 Aligned_cols=277 Identities=11% Similarity=0.051 Sum_probs=197.9
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
..++++++++++|. +++++|+|+++++..++..++++||+ |+++.++|.+....++..|++++.++.+
T Consensus 46 ~~~l~~~la~~~g~--------~~i~~~~g~t~al~~~l~~~~~~gd~----Vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 113 (361)
T cd06452 46 IKDFHHDLAEFLGM--------DEARVTPGAREGKFAVMHSLCEKGDW----VVVDGLAHYTSYVAAERAGLNVREVPNT 113 (361)
T ss_pred HHHHHHHHHHHcCC--------ceEEEeCCHHHHHHHHHHHhcCCCCE----EEEcCCcchHHHHHHHhcCCEEEEEecC
Confidence 48999999999984 57999999999999999999999998 9999999888888888899999998876
Q ss_pred ccc---ccc-------C-------CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCcc
Q 018172 118 ANT---FDK-------N-------NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHD 179 (360)
Q Consensus 118 ~~~---~~~-------~-------~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~ 179 (360)
.++ ++. + +++++|++++|+||||...+ +.+.++|+++|+++|+|++|..+..+......+.+
T Consensus 114 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~d 193 (361)
T cd06452 114 GHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGAD 193 (361)
T ss_pred CCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHcCCC
Confidence 542 211 1 36899999999999999877 67778888899999999999865433222345678
Q ss_pred EEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhcc--------ccCChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 180 IMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGS--------IGVSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 180 i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
++++|+||.++ ++.|+||+++ ++++++.+.+.+.... .+.+...+.++.++++.. .+++++..+.
T Consensus 194 ~~~~s~~K~l~-~~~~~G~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~----~~~~~~~~~~- 266 (361)
T cd06452 194 FIVGSGHKSMA-ASAPIGVLAT-TEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHV----KERVKRWDEE- 266 (361)
T ss_pred EEEecCCcccc-CCCCeEEEEE-CHHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHH----HHHHHHHHHH-
Confidence 99999999998 5569999998 7888888866543211 111112233333434321 1334433333
Q ss_pred HHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC---------c--hHHHHHHHHhhCeeeeCCCCCC
Q 018172 252 SERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK---------E--DEDCEKLLRAERIMARGGRRFG 320 (360)
Q Consensus 252 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~~~~~~~l~~~gI~~~pg~~f~ 320 (360)
.++.+++.+.|++++++.+..+.. +.++|+.++.+ . ...+.+.|+++||.+.+ .+
T Consensus 267 ~~~~~~l~~~L~~l~g~~v~~~~~-----------~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~---~~ 332 (361)
T cd06452 267 VEKARWFVAELEKIEGIKQLGEKP-----------KNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGIK---PG 332 (361)
T ss_pred HHHHHHHHHHHhcCCCeEEECCCC-----------CCCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEEc---CC
Confidence 344578889999986665542111 12223333332 1 13578888889998532 23
Q ss_pred CCCCeEEEEecC-ChHHHHHHHHHHHHHH
Q 018172 321 ADAKYARVSMLS-REEIFNIFLERLSAIQ 348 (360)
Q Consensus 321 ~~~~~~R~s~~~-~~e~~~~~~~~l~~~~ 348 (360)
..+++|++... ++|+++.++++|+++.
T Consensus 333 -~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 333 -LTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred -CceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 25589999844 9999999999999765
No 128
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.95 E-value=4.1e-26 Score=216.07 Aligned_cols=283 Identities=15% Similarity=0.094 Sum_probs=201.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh---cCCCCCCCceEEEeCCCCCCcH----HHHHHhCCee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL---SSPGGPEPISVVSAAPYYSQYP----AETDYLRSGL 111 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l---~~~gd~~~~~vl~~~p~~~~~~----~~~~~~g~~~ 111 (360)
+++|+.++++++. ++++|++++|++++++.++.++ +++||+ |++++|+|.+.. ..++..|+++
T Consensus 63 ~~l~~~ia~~~~~------~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~----vl~~~~~~~s~~~~~~~~~~~~g~~~ 132 (397)
T TIGR01976 63 DDAREAVADLLNA------DPPEVVFGANATSLTFLLSRAISRRWGPGDE----VIVTRLDHEANISPWLQAAERAGAKV 132 (397)
T ss_pred HHHHHHHHHHcCC------CCCeEEEeCCHHHHHHHHHHHHHhcCCCCCE----EEEcCCchHhHHHHHHHHHHhcCCEE
Confidence 6899999999986 4457999999999998877765 678998 999999997754 4456689999
Q ss_pred eeecCCccc--cc-----c--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEE
Q 018172 112 YKWDGDANT--FD-----K--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIM 181 (360)
Q Consensus 112 ~~~~~~~~~--~~-----~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~ 181 (360)
+.++.+.+. ++ . ++++++|++++|+||||..++ +.+.++|+++|+++++|+++..+..+......+.+++
T Consensus 133 ~~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~ 212 (397)
T TIGR01976 133 KWARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQATGADFL 212 (397)
T ss_pred EEEeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHcCCCEE
Confidence 988776421 11 1 457899999999999999988 6788888889999999999875433322334567888
Q ss_pred EeccccccCCCCceEEEEeecCHHHHHHHHHHHhhc----------cccCChHHHHHHHHHhcccCCC-----------c
Q 018172 182 LFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELG----------SIGVSKESQLRAAKILGIVSDD-----------Y 240 (360)
Q Consensus 182 ~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~----------~~~~~~~~~~~~~~~l~~~~~~-----------~ 240 (360)
+.|++|.+| .|+|++++ ++++++.+....... ..+.+.....++.++++.+.+. .
T Consensus 213 ~~s~~K~~g---~~~G~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~ 288 (397)
T TIGR01976 213 TCSAYKFFG---PHMGILWG-RPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERL 288 (397)
T ss_pred EEechhhcC---CceEEEEE-cHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhh
Confidence 999999875 35899998 788887765432211 1223333333444444433211 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCC
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRR 318 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~ 318 (360)
..++++.+++..+.++++.+.|++++++.+..+... ...++++.+..++ ...+.+.|.++||.++.|..
T Consensus 289 ~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~ 359 (397)
T TIGR01976 289 VASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARL---------AARVPTVSFTVHGLPPQRVVRRLADQGIDAWAGHF 359 (397)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCc---------cCCCceEEEEeCCcCHHHHHHHHHHCCeEEEeCcc
Confidence 113677888888899999999988865655433100 0223355555543 36788888999999998755
Q ss_pred CC--------C--CCCeEEEEecC--ChHHHHHHHHHH
Q 018172 319 FG--------A--DAKYARVSMLS--REEIFNIFLERL 344 (360)
Q Consensus 319 f~--------~--~~~~~R~s~~~--~~e~~~~~~~~l 344 (360)
+. . ..+++|+|+.. +++|+++++++|
T Consensus 360 ~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 360 YAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred chHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 42 1 24689999955 899999998864
No 129
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.95 E-value=1.6e-25 Score=198.82 Aligned_cols=301 Identities=15% Similarity=0.216 Sum_probs=204.5
Q ss_pred cccc-cCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChH-HHHHHHHHh-h-c-CCC------CCCCceEEE
Q 018172 24 MSYL-SDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGST-QLYQAALYA-L-S-SPG------GPEPISVVS 92 (360)
Q Consensus 24 ~~~y-~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t-~~l~~~~~~-l-~-~~g------d~~~~~vl~ 92 (360)
...| +...|+ +++|+..++++++ +.++|++..+++ +.++.++.. + . ..| +.+.+++|+
T Consensus 61 ~RNY~G~l~Gi-----pe~r~l~a~llgv------~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLC 129 (425)
T PF12897_consen 61 CRNYPGGLDGI-----PEARELFAELLGV------PPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLC 129 (425)
T ss_dssp TTSS-S-SS-------HHHHHHHHHHHTS-------GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEE
T ss_pred ccCCCCccCCh-----HHHHHHHHHHhCC------CHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEe
Confidence 3568 788888 9999999999998 778999885544 444443332 2 1 112 234578999
Q ss_pred eCCCCCCcHHHHHHhCCeeeeecCCcccccc---------CCCeeEE-EEcCCCCCCcccchHH-HHHHh----hhcCcE
Q 018172 93 AAPYYSQYPAETDYLRSGLYKWDGDANTFDK---------NNGAYIE-VVNSPNNPDGTIREAV-LAKVN----RSAEGK 157 (360)
Q Consensus 93 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~---------~~~~~~i-~~~~p~NPtG~~~~~~-~~~~~----~~~~~~ 157 (360)
|.|+|.....+++.+|.+.+++|++.+|-+. |+..|.+ +++..+||||+++|++ .++++ ...+..
T Consensus 130 PvPGYDRHFai~E~~Giemi~VpM~~dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFR 209 (425)
T PF12897_consen 130 PVPGYDRHFAITEHFGIEMIPVPMTEDGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFR 209 (425)
T ss_dssp EES--HHHHHHHHHCT-EEEEEEEETTEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-E
T ss_pred cCCCchHHHHHHHhhCcEEEecCCCCCCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeE
Confidence 9999999999999999999999988766543 6788887 6678899999999953 33333 238999
Q ss_pred EEEeecccCCCC------Cc---C------CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCC
Q 018172 158 LIHDLAYYWPQY------TP---I------TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVS 222 (360)
Q Consensus 158 li~D~ay~~~~~------~~---~------~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~ 222 (360)
|+.|+||..-++ .. + .+..++++.+.|+||+.- +|.+++++.+ +++.++.+.+.....+.+..
T Consensus 210 I~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf-~GaGva~~aa-S~~Nl~~~~~~~~~~tIgpd 287 (425)
T PF12897_consen 210 IFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITF-PGAGVAFFAA-SEANLAWIKKHLSVQTIGPD 287 (425)
T ss_dssp EEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE--HHHHHHHHHHHHHH-S---
T ss_pred EEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEeccccccc-CCcceeeeec-CHHHHHHHHHHhcCceeCcc
Confidence 999999984222 11 1 257899999999999664 9999999998 89999999888888899999
Q ss_pred hHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhc-----CCcccCCCCCcccccccccCCCCCCcccccCC
Q 018172 223 KESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQS-----GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK 297 (360)
Q Consensus 223 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (360)
.+.|..-..+|....++.+.||++.++.++-+.+.+.+.|.+. +...+..|.|++ |++++..
T Consensus 288 KvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGY-------------FIsld~~ 354 (425)
T PF12897_consen 288 KVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGY-------------FISLDVL 354 (425)
T ss_dssp HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS--------------EEEEES
T ss_pred HHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCce-------------EEEEecC
Confidence 9999999999986654677999999999999999888877543 345677888777 9999998
Q ss_pred ch--HHHHHHHHhhCeeeeC-CCCCC--C--CCCeEEEEecC-ChHHHHHHHHHHHHHHhc
Q 018172 298 ED--EDCEKLLRAERIMARG-GRRFG--A--DAKYARVSMLS-REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 298 ~~--~~~~~~l~~~gI~~~p-g~~f~--~--~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~ 350 (360)
++ ..+.++.++.||.+.| |..|. . .+..+|++.+- +.|+++.+++.+.-.+.-
T Consensus 355 ~G~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~l 415 (425)
T PF12897_consen 355 DGTAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVKL 415 (425)
T ss_dssp TT-HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 87 8899999999999999 77773 2 35689999877 789999999998877653
No 130
>PLN02483 serine palmitoyltransferase
Probab=99.95 E-value=1.6e-25 Score=215.53 Aligned_cols=289 Identities=16% Similarity=0.110 Sum_probs=202.9
Q ss_pred ccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHH
Q 018172 27 LSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDY 106 (360)
Q Consensus 27 y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~ 106 (360)
|+...+. .+||+++|+|++. ++.|++++|. .++..++.+++++||. |++++|+|.++...++.
T Consensus 142 ~g~~~~~-----~ele~~lA~~~g~-------~~ai~~~~G~-~an~~~i~al~~~Gd~----Vi~d~~~h~s~~~~~~~ 204 (489)
T PLN02483 142 GGTTKLH-----RELEELVARFVGK-------PAAIVFGMGY-ATNSTIIPALIGKGGL----IISDSLNHNSIVNGARG 204 (489)
T ss_pred cCCcHHH-----HHHHHHHHHHhCC-------CcEEEECCHH-HHHHHHHHHhCCCCCE----EEEcchhhHHHHHHHHH
Confidence 5555555 9999999999994 5578888874 4455778889999998 99999999999999999
Q ss_pred hCCeeeeecCC-cccccc---------CCC-----eeEEEEc-CCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC
Q 018172 107 LRSGLYKWDGD-ANTFDK---------NNG-----AYIEVVN-SPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY 169 (360)
Q Consensus 107 ~g~~~~~~~~~-~~~~~~---------~~~-----~~~i~~~-~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~ 169 (360)
.|++++.++.+ .+.++. .++ .++++++ ...|++|...+ +.+.++|+++++++|+||+|+.+..
T Consensus 205 ~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~ 284 (489)
T PLN02483 205 SGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAV 284 (489)
T ss_pred cCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCcc
Confidence 99999988754 222211 122 2555444 45689999988 7788889999999999999974211
Q ss_pred -------CcCC--CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhc--cccCChHHHHHHHHHhcccCC
Q 018172 170 -------TPIT--GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELG--SIGVSKESQLRAAKILGIVSD 238 (360)
Q Consensus 170 -------~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~ 238 (360)
.... ...+.+++++||||+||++| ||+++ ++++++.+....... +.+.+++...++.++++.+..
T Consensus 285 G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G---G~i~~-~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~ 360 (489)
T PLN02483 285 GKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG---GYIAG-SKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILG 360 (489)
T ss_pred CCCCCchHHhcCCCcccCcEEEEecchhcccCc---eEEEc-CHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHh
Confidence 1111 23467899999999999887 99998 899999998764321 222333333345555653321
Q ss_pred -CchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhhCeeee
Q 018172 239 -DYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERIMAR 314 (360)
Q Consensus 239 -~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~ 314 (360)
+......+.+++++++++++.+.|++++ +.+..+.++. .+|+.+.. ...+.+.|.++||.++
T Consensus 361 ~~g~~~~~~~~~~l~~~~~~l~~~L~~~G-~~v~~~~~sp-------------~~~l~l~~~~~~~~~~~~Ll~~GI~v~ 426 (489)
T PLN02483 361 EDGTNRGAQKLAQIRENSNFFRSELQKMG-FEVLGDNDSP-------------VMPIMLYNPAKIPAFSRECLKQNVAVV 426 (489)
T ss_pred CccccchHHHHHHHHHHHHHHHHHHHHCC-CcccCCCCCC-------------EEEEEECCHHHHHHHHHHHHHCCcEEe
Confidence 1114555668899999999999999984 4443332221 22332222 2445566667899999
Q ss_pred CCCCCCC---CCCeEEEEecC--ChHHHHHHHHHHHHHHhch
Q 018172 315 GGRRFGA---DAKYARVSMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 315 pg~~f~~---~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
| ..|.. ..+.+||+++. ++|++++++++|.++++..
T Consensus 427 ~-~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 427 V-VGFPATPLLLARARICISASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred e-eCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 7 44522 24689999965 9999999999999998643
No 131
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.95 E-value=7.4e-26 Score=212.94 Aligned_cols=288 Identities=16% Similarity=0.095 Sum_probs=210.8
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc---CCCCCCCceEEEeCCCCCCcHHHH---HHhCCee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS---SPGGPEPISVVSAAPYYSQYPAET---DYLRSGL 111 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~---~~gd~~~~~vl~~~p~~~~~~~~~---~~~g~~~ 111 (360)
.+++|+.++++++. ++++|++|+|+|++++.++..+. .+++. |+++..+|+.+...+ +..|+++
T Consensus 44 ~~~~r~~la~~~g~------~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~----vv~~~~~~~s~~~~~~~~~~~G~~v 113 (379)
T TIGR03402 44 VEEAREQVAKLLGA------EPDEIIFTSGGTESDNTAIKSALAAQPEKRH----IITTAVEHPAVLSLCQHLEKQGYKV 113 (379)
T ss_pred HHHHHHHHHHHhCC------CCCeEEEeCcHHHHHHHHHHHHHHhcCCCCe----EEEcccccHHHHHHHHHHHHcCCEE
Confidence 37889999999986 55689999999999999888764 34566 999998888776443 3459999
Q ss_pred eeecCCccc-ccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEE
Q 018172 112 YKWDGDANT-FDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIML 182 (360)
Q Consensus 112 ~~~~~~~~~-~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~ 182 (360)
+.++.+.++ ++. +++++++++++++||||..++ +.+.++|+++|+++++|++++.+..+......+.++++
T Consensus 114 ~~v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~ 193 (379)
T TIGR03402 114 TYLPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLS 193 (379)
T ss_pred EEEccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCcccCCCCEEE
Confidence 988876443 211 468899999999999999999 67788899899999999999876655444566788999
Q ss_pred eccccccCCCCceEEEEeecCHHHHHHHHHHH-------hhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHH
Q 018172 183 FTLSKCTGHAGSRIGWALVKDTEVARKMTRFI-------ELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERW 255 (360)
Q Consensus 183 ~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 255 (360)
.|.+|.+|++| +|+++.++ +.. +.... .....+.+.+...++.++++.+. +++++..++.++++
T Consensus 194 ~s~~K~~gp~G--~g~l~v~~-~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~----~~~~~~~~~~~~l~ 264 (379)
T TIGR03402 194 LSGHKLHGPKG--VGALYIRK-GTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELAT----EHLEEENTRVRALR 264 (379)
T ss_pred EcHHHcCCCCc--eEEEEECC-CCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHH----HhHHHHHHHHHHHH
Confidence 99999888777 77777633 221 11110 11234566666666777776543 56788888999999
Q ss_pred HHHHHHHHh-cCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCC------------
Q 018172 256 NMLRQVIRQ-SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGAD------------ 322 (360)
Q Consensus 256 ~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~------------ 322 (360)
+++.+.|++ ++++.+..+.... .+....+|+...+.+++...|.++||.+++|..|...
T Consensus 265 ~~l~~~l~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg 336 (379)
T TIGR03402 265 DRLEAGLLARIPDARLNGDPTKR--------LPNTVNISFEYIEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMG 336 (379)
T ss_pred HHHHHHHHhhCCCEEEeCCCccC--------CCCEEEEEecCCCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcC
Confidence 999999985 7666554332110 0111134555445577778889999999998766321
Q ss_pred ------CCeEEEEecC--ChHHHHHHHHHHHHHHhchh
Q 018172 323 ------AKYARVSMLS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 323 ------~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
.+.+|+|+.. ++||+++++++|+++++..+
T Consensus 337 ~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 337 VPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred CChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3689999976 89999999999999987644
No 132
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.95 E-value=1.2e-25 Score=211.64 Aligned_cols=292 Identities=14% Similarity=0.108 Sum_probs=209.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc-----CCC-CCCCceEEEeCCCCCCcHHH---HHHhCC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS-----SPG-GPEPISVVSAAPYYSQYPAE---TDYLRS 109 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~-----~~g-d~~~~~vl~~~p~~~~~~~~---~~~~g~ 109 (360)
+.++++++++....+. .++++|++|+|+|++++.++.++. +++ ++ |+++.+.|+.+... ++..|+
T Consensus 42 ~~l~~a~~~~~~~~~~--~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~----vi~~~~e~ps~~~~~~~~~~~G~ 115 (382)
T TIGR03403 42 PAIAEALDKLYKGINA--RDLDDIIITSCATESNNWVLKGVYFDEILKGGKNH----IITTEVEHPAVRATCAFLESLGV 115 (382)
T ss_pred HHHHHHHHHHHHHcCc--CCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCE----EEEcCCccHHHHHHHHHHHHCCC
Confidence 7888888877643222 234689999999999999988763 454 55 99998887766554 455799
Q ss_pred eeeeecCCcccc-c-----c--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccE
Q 018172 110 GLYKWDGDANTF-D-----K--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDI 180 (360)
Q Consensus 110 ~~~~~~~~~~~~-~-----~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i 180 (360)
+++.++.+.++. + . +++++++++++||||||.+++ +.+.++|+++|+++++|+++..+..+......+.++
T Consensus 116 ~v~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~D~ 195 (382)
T TIGR03403 116 EVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQKAGVDF 195 (382)
T ss_pred EEEEEecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCccccCCCE
Confidence 999998764322 1 1 457899999999999999998 677788888999999999988655443334556789
Q ss_pred EEeccccccCCCCceEEEEeecCHH-HHHHH---HHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHH
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTE-VARKM---TRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWN 256 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~-~~~~l---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 256 (360)
++.|++|.+|++| +|+++.++.. +...+ .........+.|.+.+.++.++++... ++++..++++++.++
T Consensus 196 ~~~s~~K~~gp~G--~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~----~~~~~~~~~~~~l~~ 269 (382)
T TIGR03403 196 LSFSAHKFHGPKG--VGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLAN----EYLDFEKSHVRRLRD 269 (382)
T ss_pred EEEcchhhCCCCc--eEEEEECCCCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHH----HhHHHHHHHHHHHHH
Confidence 9999999988888 5777653221 10111 001112345677888888888776432 557888899999999
Q ss_pred HHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCCCC--------------
Q 018172 257 MLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRRFG-------------- 320 (360)
Q Consensus 257 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~f~-------------- 320 (360)
++.+.|++++++.+..+... ..++++.+.+++ .+.+...|.++||.++.|..+.
T Consensus 270 ~l~~~L~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g 339 (382)
T TIGR03403 270 RLEDALLELPDVFVVGDREH----------RVPNTILISIKGVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIG 339 (382)
T ss_pred HHHHHHhcCCCEEEECCCCC----------CcCCEEEEEeCCCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcC
Confidence 99999998877766543210 122344455543 3666667889999999875442
Q ss_pred C----CCCeEEEEecC--ChHHHHHHHHHHHHHHhchh
Q 018172 321 A----DAKYARVSMLS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 321 ~----~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
. ..+.+|+|+.. ++||+++++++|++++.+.+
T Consensus 340 ~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 340 ADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred CChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 13579999976 89999999999999987654
No 133
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.94 E-value=6.6e-25 Score=204.64 Aligned_cols=283 Identities=14% Similarity=0.124 Sum_probs=208.0
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCC--cEEEcCChHHHHHHHHHhhcCCCCCCCceEEEe-CCCCCC-cHHHHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGR--HIVIGTGSTQLYQAALYALSSPGGPEPISVVSA-APYYSQ-YPAETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~--~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~-~p~~~~-~~~~~~~~g~~~~~ 113 (360)
.+++|+.++++++. +++ .|++++|+++++..++..++.++|. +++. .+.|+. +...++..|.+++.
T Consensus 33 ~~~~~~~la~~~~~------~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~----vi~~~~~~~~~~~~~~a~~~g~~~~~ 102 (355)
T TIGR03301 33 TDQVRDRLLALAGG------DDNHTCVLLQGSGTFAVEATIGSLVPRDGK----LLVLINGAYGERLAKICEYLGIPHTD 102 (355)
T ss_pred HHHHHHHHHHHhcC------CCCCcEEEEeCCcHHHHHHHHHhccCCCCe----EEEECCCchhhHHHHHHHHcCCceEE
Confidence 38999999999986 332 5788999999999999999888876 5554 455554 45677888999998
Q ss_pred ecCCcc-cc-----cc----CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEE
Q 018172 114 WDGDAN-TF-----DK----NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIML 182 (360)
Q Consensus 114 ~~~~~~-~~-----~~----~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~ 182 (360)
++.+.+ .+ +. +++++++++++++||||...+ +++.++|+++++++|+|++++.+..+......+.++++
T Consensus 103 i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~ 182 (355)
T TIGR03301 103 LNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALI 182 (355)
T ss_pred EecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhcCccEEE
Confidence 876532 22 21 246678888999999999988 67888888899999999988765443333456788999
Q ss_pred ecccccc-CCCCceEEEEeecCHHHHHHHHHHH-----------------hhccccCChHHHHHHHHHhcccCCCchhHH
Q 018172 183 FTLSKCT-GHAGSRIGWALVKDTEVARKMTRFI-----------------ELGSIGVSKESQLRAAKILGIVSDDYPNFF 244 (360)
Q Consensus 183 ~S~sK~~-~~~G~r~G~~~~~~~~~~~~l~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 244 (360)
.|++|.+ +++| +||+++ ++++++.+.... ....++.+...+.++.++++.+.+. ..+
T Consensus 183 ~s~~K~l~~~~G--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~--g~~ 257 (355)
T TIGR03301 183 ASANKCLEGVPG--FGFVIA-RRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAE--GGV 257 (355)
T ss_pred ecCCcccccCCc--eeEEEE-CHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHc--ccH
Confidence 9999976 5566 799998 788887765210 1123456777788877777755332 347
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----h-HHHHHHHHhhCeeeeCCCCC
Q 018172 245 EYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----D-EDCEKLLRAERIMARGGRRF 319 (360)
Q Consensus 245 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~l~~~gI~~~pg~~f 319 (360)
++.+++++++++++.+.|++++ +.+..+... ..+.++|+.++. . +++.+.|.++||.+.+|..+
T Consensus 258 ~~~~~~~~~~~~~~~~~L~~~g-~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~ 326 (355)
T TIGR03301 258 PARIARYRRNRELLVDGLRALG-FQPLLPERW----------QSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLT 326 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-CeeecCCCC----------CCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccc
Confidence 8888899999999999998874 443222110 112245666653 1 57888999999999998755
Q ss_pred CCCCCeEEEEecC--ChHHHHHHHHHHHHHH
Q 018172 320 GADAKYARVSMLS--REEIFNIFLERLSAIQ 348 (360)
Q Consensus 320 ~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~ 348 (360)
. .+++||++.. ++|++++++++|++++
T Consensus 327 ~--~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 327 L--ADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred c--ccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 4 2799999744 8999999999998763
No 134
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.94 E-value=1.6e-25 Score=202.19 Aligned_cols=294 Identities=17% Similarity=0.087 Sum_probs=229.8
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc--CCCCCCCceEEEeCCCCCCcHHHHHHh---CCeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS--SPGGPEPISVVSAAPYYSQYPAETDYL---RSGLY 112 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~--~~gd~~~~~vl~~~p~~~~~~~~~~~~---g~~~~ 112 (360)
.++.|+++++.+|. ++++|++|+|+||+.++++.+.+ .+....+.+++++.-.|+++...++.+ |.++.
T Consensus 46 ve~AR~~iA~llga------~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vt 119 (386)
T COG1104 46 VEEAREQIAKLLGA------DPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVT 119 (386)
T ss_pred HHHHHHHHHHHhCC------CCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEE
Confidence 38899999999997 56799999999999999999842 211112235999999999999998887 99999
Q ss_pred eecCCcccccc--------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEe
Q 018172 113 KWDGDANTFDK--------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLF 183 (360)
Q Consensus 113 ~~~~~~~~~~~--------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~ 183 (360)
.++++.+|... .++|.+|.+...||.||.+.| +++.++|+++++++++|.+++.+..+-.....+.++...
T Consensus 120 yl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~ 199 (386)
T COG1104 120 YLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEELGVDLLSF 199 (386)
T ss_pred EeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceeccccccCcceEEe
Confidence 99999776644 478999999999999999999 889999999999999999999887777777777899999
Q ss_pred ccccccCCCCceEEEEeecCHHHHHHH----HHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHH
Q 018172 184 TLSKCTGHAGSRIGWALVKDTEVARKM----TRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLR 259 (360)
Q Consensus 184 S~sK~~~~~G~r~G~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 259 (360)
|-+|+.|+.| +|+++.++.--.+.+ .+.+...+.+.|.+...+...+++... +.++....+++..|+++.
T Consensus 200 SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~----~~~~~~~~~~~~lr~~l~ 273 (386)
T COG1104 200 SAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAV----EELEEENARLRKLRDRLE 273 (386)
T ss_pred ehhhccCCCc--eEEEEECCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
Confidence 9999999888 787776332222222 223334556677777777777776433 778888889999999999
Q ss_pred HHHHhc-CCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCCCCCC--------------
Q 018172 260 QVIRQS-GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRRFGAD-------------- 322 (360)
Q Consensus 260 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~f~~~-------------- 322 (360)
+.|.+. +.+.+.... ....++.+.+.+++ ++.+...|..+||.+..|+.+...
T Consensus 274 ~~l~~~~p~~~~~g~~----------~~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~ 343 (386)
T COG1104 274 DGLLEIIPDVYLNGDD----------EPRLPNILNFSFPGVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGIS 343 (386)
T ss_pred HHHHhcCCcEEEcCCc----------ccCCCCeEEEEeCCCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCC
Confidence 999976 554443221 11333445555554 388999999999999999877421
Q ss_pred ----CCeEEEEecC--ChHHHHHHHHHHHHHHhchhc
Q 018172 323 ----AKYARVSMLS--REEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 323 ----~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~~ 353 (360)
.+.+||||+. ++||++.+++++.+++++.|.
T Consensus 344 ~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 344 EELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred hHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 3579999987 899999999999999998764
No 135
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.94 E-value=9e-25 Score=204.82 Aligned_cols=289 Identities=10% Similarity=0.033 Sum_probs=209.3
Q ss_pred cHHHHHHHHHHHhhcCCCCCCC--CcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc--HHHHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDG--RHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY--PAETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~--~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~--~~~~~~~g~~~~~ 113 (360)
..++|+.++++++. ++ +.|++++|+++++..++..+..+||. ++++.+++... ...++..|++++.
T Consensus 39 ~~~~~~~l~~l~~~------~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~----vlv~~~~~~~~~~~~~~~~~g~~~~~ 108 (368)
T PRK13479 39 TASVRAKLVAIATG------EEGYTCVPLQGSGTFSVEAAIGSLVPRDGK----VLVPDNGAYGARIAQIAEYLGIAHVV 108 (368)
T ss_pred HHHHHHHHHHHhCC------CCCceEEEEcCCcHHHHHHHHHhccCCCCe----EEEEeCCchHHHHHHHHHHcCCcEEE
Confidence 38999999999885 32 45889999999999999999998987 88888877665 4777888999998
Q ss_pred ecCCcc-cccc---------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEE
Q 018172 114 WDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIML 182 (360)
Q Consensus 114 ~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~ 182 (360)
++.+.+ .++. .++++++++++|+||||...+ +.+.++|+++++++|+|+++..+..+......+.++++
T Consensus 109 i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v 188 (368)
T PRK13479 109 LDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALI 188 (368)
T ss_pred EECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCccccccccCceEEE
Confidence 887632 2211 245678999999999999988 67788888899999999877654433222344567889
Q ss_pred ecccccc-CCCCceEEEEeecCHHHHHHHHHHHh-----------------hccccCChHHHHHHHHHhcccCCCchhHH
Q 018172 183 FTLSKCT-GHAGSRIGWALVKDTEVARKMTRFIE-----------------LGSIGVSKESQLRAAKILGIVSDDYPNFF 244 (360)
Q Consensus 183 ~S~sK~~-~~~G~r~G~~~~~~~~~~~~l~~~~~-----------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 244 (360)
.|++|.+ |++| +||+++ ++++++.+..... ...++.+.+.+.++.++++.+.+. .++
T Consensus 189 ~s~~K~l~g~~G--~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~--~~~ 263 (368)
T PRK13479 189 SSANKCIEGVPG--FGFVIA-RRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEE--GGV 263 (368)
T ss_pred ecCccccccCCC--ceEEEE-CHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHh--hCH
Confidence 9999965 7778 699998 7888777654321 111356666666777777654332 457
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC---chHHHHHHHHhhCeeeeCCCCCCC
Q 018172 245 EYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK---EDEDCEKLLRAERIMARGGRRFGA 321 (360)
Q Consensus 245 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gI~~~pg~~f~~ 321 (360)
++.++++.++++++.+.|++++ +.+..+.. . ..+... .+++... +.+.+.+.|.++||.+++|..+.
T Consensus 264 ~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~-~------~~~~~~-~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~~- 333 (368)
T PRK13479 264 PARGARYANNQRTLVAGMRALG-FEPLLDAE-I------QSPIIV-TFHAPADPAYDFKEFYERLKEQGFVIYPGKLTQ- 333 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-CcccCCch-h------cCceEE-EEECCCCCCcCHHHHHHHHHHCCEEEecCCCCC-
Confidence 7888999999999999999984 33322211 0 000011 1232221 23678888999999999986442
Q ss_pred CCCeEEEEecC--ChHHHHHHHHHHHHHHhchh
Q 018172 322 DAKYARVSMLS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 322 ~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
.+++|++... ++|++++++++|++++.+..
T Consensus 334 -~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 334 -VDTFRIGCIGDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred -CCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 4689998634 99999999999999987653
No 136
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.94 E-value=3.7e-25 Score=210.20 Aligned_cols=276 Identities=15% Similarity=0.133 Sum_probs=196.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC--CCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS--PGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG 116 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~--~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 116 (360)
.+|+++++++++. ++.|++++| ++++..++..+.. +|+. |+++.+.|..+...++..|.++..++.
T Consensus 94 ~~Le~~la~~~g~-------~~~i~~~sG-~~a~~~~i~~l~~~~~g~~----vi~~~~~h~s~~~~~~~~g~~~~~~~~ 161 (410)
T PRK13392 94 VLLERELADLHGK-------ESALLFTSG-YVSNDAALSTLGKLLPGCV----ILSDALNHASMIEGIRRSGAEKQVFRH 161 (410)
T ss_pred HHHHHHHHHHhCC-------CCEEEECcH-HHHHHHHHHHHhcCCCCCE----EEEehhhhHHHHHHHHHcCCeEEEEeC
Confidence 6788888888773 457888887 5666677776643 6776 888777888888888888998877753
Q ss_pred C-cccccc------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC----CcCC---CCC-CccE
Q 018172 117 D-ANTFDK------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY----TPIT---GAA-DHDI 180 (360)
Q Consensus 117 ~-~~~~~~------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~----~~~~---~~~-~~~i 180 (360)
+ .+.+.. ++++++|++++|+||||.+++ +.+.++|+++++++|+||+|..+.+ .... +.. ..++
T Consensus 162 ~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~di 241 (410)
T PRK13392 162 NDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDM 241 (410)
T ss_pred CCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcE
Confidence 2 111111 357899999999999999988 6788889889999999999983221 1111 112 2358
Q ss_pred EEeccccccCCCCceEEEEeecCHHHHHHHHHHHhh--ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIEL--GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
+++||||.||++| ||+++ ++++++.+++.... .+.+.+++.+.++.++|+.+. .....+++++++++++
T Consensus 242 v~~tlsK~~g~~G---G~~~~-~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~-----~~~~~~~~~~~~~~~l 312 (410)
T PRK13392 242 IQGTLAKAFGCLG---GYIAA-SADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLK-----TSQTERDAHQDRVAAL 312 (410)
T ss_pred EEEEChHhhhccc---chhhc-CHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHH
Confidence 8999999999888 99988 89999988876542 233456677888878887432 2234567789999999
Q ss_pred HHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHH-HhhCeeeeCCCCCCC--CCCeEEEEec-
Q 018172 259 RQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLL-RAERIMARGGRRFGA--DAKYARVSML- 331 (360)
Q Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l-~~~gI~~~pg~~f~~--~~~~~R~s~~- 331 (360)
.+.|++.+ +.+..+. ++|+.+.+++. ..+.+.| .++||.++++..... +..++|+++.
T Consensus 313 ~~~L~~~g-~~~~~~~--------------~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~ 377 (410)
T PRK13392 313 KAKLNANG-IPVMPSP--------------SHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTP 377 (410)
T ss_pred HHHHHHcC-CCCCCCC--------------CCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECC
Confidence 99999873 4433222 22333333332 4455555 578999998654332 3468999985
Q ss_pred -CChHHHHHHHHHHHHHHhc
Q 018172 332 -SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 332 -~~~e~~~~~~~~l~~~~~~ 350 (360)
.++|++++++++|.++.++
T Consensus 378 ~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 378 LHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 3999999999999998764
No 137
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.94 E-value=1.1e-24 Score=203.84 Aligned_cols=284 Identities=12% Similarity=0.045 Sum_probs=207.3
Q ss_pred cHHHHHHHHHHHhhcCCCCCCC--CcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc--HHHHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDG--RHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY--PAETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~--~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~--~~~~~~~g~~~~~ 113 (360)
.+++|+.++++++. ++ ++|++|+|+|++++.++..+..+||. +++..+.+.+. ...++..|.+++.
T Consensus 37 ~~~~r~~la~l~~~------~~~~~~i~~t~~~t~al~~~~~~l~~~~~~----vlv~~~~~~~~~~~~~a~~~g~~~~~ 106 (363)
T TIGR02326 37 VEQIRQQLLALATA------EEGYTSVLLQGSGTFAVEAVIGSAVPKDGK----LLVVINGAYGARIVQIAEYLGIPHHV 106 (363)
T ss_pred HHHHHHHHHHHhCC------CCCceEEEEcCCCHHHHHHHHHhcCCCCCe----EEEEeCChhhHHHHHHHHHcCCceEE
Confidence 37889999999986 43 36999999999999999999888886 66655544433 4667888999998
Q ss_pred ecCCcc-cccc---------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEE
Q 018172 114 WDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIML 182 (360)
Q Consensus 114 ~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~ 182 (360)
++.+.+ .++. +++++++++++++||||..++ +.+.++|+++|+++++|++++.+..+......+.++++
T Consensus 107 v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~ 186 (363)
T TIGR02326 107 VDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLI 186 (363)
T ss_pred EeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcCccEEE
Confidence 887642 2221 245678899999999999998 77888888899999999988865544334555678999
Q ss_pred ecccccc-CCCCceEEEEeecCHHHHHHHHHHH------------------hhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 183 FTLSKCT-GHAGSRIGWALVKDTEVARKMTRFI------------------ELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 183 ~S~sK~~-~~~G~r~G~~~~~~~~~~~~l~~~~------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
+|++|.+ +++| +||+++ +++.++.+.... ....++.+.+.+.++.++++.+.+. ..
T Consensus 187 ~s~~K~l~~p~G--~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~--g~ 261 (363)
T TIGR02326 187 SSANKCIQGVPG--FGFVIA-RQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKE--GG 261 (363)
T ss_pred ecCccccccCCc--ceEEEE-CHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHh--hC
Confidence 9999977 5566 799998 677766543210 0112356778888877777654332 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-----hHHHHHHHHhhCeeeeCCCC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-----DEDCEKLLRAERIMARGGRR 318 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~gI~~~pg~~ 318 (360)
+++.+++++++++++.+.|++++ +....+... ..+...++.+++ ...+.+.|+++||.+.||..
T Consensus 262 ~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~ 330 (363)
T TIGR02326 262 VAARHQRYQQNQKTLVAGMRALG-FEPLLDDEI----------QSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKV 330 (363)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC-CeeccCccc----------CCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcC
Confidence 77888999999999999998884 333222110 111123445443 26678888999999999876
Q ss_pred CCCCCCeEEEEe-cC-ChHHHHHHHHHHHHHHh
Q 018172 319 FGADAKYARVSM-LS-REEIFNIFLERLSAIQG 349 (360)
Q Consensus 319 f~~~~~~~R~s~-~~-~~e~~~~~~~~l~~~~~ 349 (360)
+. .+++|+++ +. +.|++++++++|++++.
T Consensus 331 ~~--~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 331 SQ--VDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred CC--CCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 63 46899995 43 99999999999998764
No 138
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.94 E-value=5.5e-25 Score=204.71 Aligned_cols=275 Identities=19% Similarity=0.190 Sum_probs=199.4
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC-
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG- 116 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~- 116 (360)
..++++.++++++. ++.++ ++++++++..++..++++||. |++++|+|.++...++..|++++.++.
T Consensus 48 ~~~l~~~la~~~~~-------~~~iv-~~sg~~a~~~~~~~~~~~gd~----Vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 115 (349)
T cd06454 48 HEELEEELAEFHGK-------EAALV-FSSGYAANDGVLSTLAGKGDL----IISDSLNHASIIDGIRLSGAKKRIFKHN 115 (349)
T ss_pred HHHHHHHHHHHhCC-------CCEEE-eccHHHHHHHHHHHhcCCCCE----EEEehhhhHHHHHHHHHcCCceEEecCC
Confidence 38999999999984 33444 555577888888888899998 999999999999889999999987753
Q ss_pred Ccccccc---C----CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCc-------C-CCCCCccE
Q 018172 117 DANTFDK---N----NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTP-------I-TGAADHDI 180 (360)
Q Consensus 117 ~~~~~~~---~----~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~-------~-~~~~~~~i 180 (360)
+.+.++. . ++++++++++++||||...+ +.+.++|+++|+++|+|++|..+.... . ....+.++
T Consensus 116 ~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i 195 (349)
T cd06454 116 DMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDI 195 (349)
T ss_pred CHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcE
Confidence 3232222 1 45788899999999999988 677888999999999999997432211 1 13456789
Q ss_pred EEeccccccCCCCceEEEEeecCHHHHHHHHHHHhh--ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIEL--GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
+++|+||.++++| ||+++ ++++.+.+...... .+.+.++..+.++.+.++... . .+..+++++++++.+
T Consensus 196 ~~~s~sK~~~~~g---G~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~-~~~~~~~~~~~~~~l 266 (349)
T cd06454 196 IMGTLGKAFGAVG---GYIAG-SKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQ----G-GPERRERLQENVRYL 266 (349)
T ss_pred EEeechhhhcccC---CEEEC-CHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHh----c-CHHHHHHHHHHHHHH
Confidence 9999999998766 99988 78888887654332 223566677777777776442 2 466788999999999
Q ss_pred HHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC---chHHHHHHHHhhCeeeeCCCCCC--CCCCeEEEEecC-
Q 018172 259 RQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK---EDEDCEKLLRAERIMARGGRRFG--ADAKYARVSMLS- 332 (360)
Q Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gI~~~pg~~f~--~~~~~~R~s~~~- 332 (360)
.+.|.+++ +....+.+.. +.++..+ +.+++.+.|.++||.+.++.... ...+++|++++.
T Consensus 267 ~~~l~~~g-~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~ 332 (349)
T cd06454 267 RRGLKELG-FPVGGSPSHI-------------IPPLIGDDPAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAA 332 (349)
T ss_pred HHHHHhcC-CcccCCCCCc-------------EEEEeCCChHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCC
Confidence 99998874 3333222111 2233333 12677778888899999864221 124799999975
Q ss_pred -ChHHHHHHHHHHHHH
Q 018172 333 -REEIFNIFLERLSAI 347 (360)
Q Consensus 333 -~~e~~~~~~~~l~~~ 347 (360)
+++++++++++|+++
T Consensus 333 ~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 333 HTKEDIDRLLEALKEV 348 (349)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 999999999999864
No 139
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.94 E-value=6.2e-25 Score=208.01 Aligned_cols=280 Identities=14% Similarity=0.108 Sum_probs=195.2
Q ss_pred HHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC-
Q 018172 39 PELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG- 116 (360)
Q Consensus 39 ~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~- 116 (360)
+++|+++++++... + .+++|++|+| ++++..++..++++||+ |++++|+|+.+...++..|.+++.++.
T Consensus 86 ~~l~~~l~~~la~~~g----~~~~i~~tsG-~~a~~~~~~~l~~~gd~----vi~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (397)
T PRK06939 86 QDLHKELEEKLAKFLG----TEDAILYSSC-FDANGGLFETLLGKEDA----IISDALNHASIIDGVRLCKAKRYRYANN 156 (397)
T ss_pred cHHHHHHHHHHHHHhC----CCcEEEEcCh-HHHHHHHHHHhCCCCCE----EEEEhhhhHHHHHHHHhcCCceEEeCCC
Confidence 56555555543322 2 2357888888 77888899999999998 999999999999999999999888763
Q ss_pred Ccccccc--------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC-------cCCC-CCCcc
Q 018172 117 DANTFDK--------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT-------PITG-AADHD 179 (360)
Q Consensus 117 ~~~~~~~--------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~-------~~~~-~~~~~ 179 (360)
|.+.+.. ..++++|++.+.+||||...+ +.+.++|+++++++|+||+|..+... ...+ ..+.+
T Consensus 157 d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~ 236 (397)
T PRK06939 157 DMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVD 236 (397)
T ss_pred CHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCc
Confidence 3332221 126788888888999998766 67888899899999999999632111 1112 22467
Q ss_pred EEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhc--cccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHH
Q 018172 180 IMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELG--SIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNM 257 (360)
Q Consensus 180 i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 257 (360)
++++|+||.++ |+|+||+++ ++++++.+....... +.+.++..+.++.++++.+. ..++.++++++++++
T Consensus 237 i~~~S~sK~~~--g~r~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~-----~~~~~~~~~~~~~~~ 308 (397)
T PRK06939 237 IITGTLGKALG--GASGGYTAG-RKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLE-----ESDELRDRLWENARY 308 (397)
T ss_pred EEEEECHHHhC--ccCceEEEe-CHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHH
Confidence 99999999985 458999998 788999887653221 12223344555555555332 125778899999999
Q ss_pred HHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhhCeeeeCCCCCCC---CCCeEEEEec
Q 018172 258 LRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERIMARGGRRFGA---DAKYARVSML 331 (360)
Q Consensus 258 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~pg~~f~~---~~~~~R~s~~ 331 (360)
+.+.|++++ +....+.+. |+++.++. ...+.+.|.++||.+.++. |+. ..+++|++++
T Consensus 309 l~~~L~~~~-~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~L~~~gI~v~~~~-~~~~~~~~~~iRi~~~ 372 (397)
T PRK06939 309 FREGMTAAG-FTLGPGEHP--------------IIPVMLGDAKLAQEFADRLLEEGVYVIGFS-FPVVPKGQARIRTQMS 372 (397)
T ss_pred HHHHHHHcC-CCcCCCCCC--------------EEEEEECCHHHHHHHHHHHHHCCceEeeeC-CCCCCCCCceEEEEEC
Confidence 999998874 333323222 33333332 2556677777799998654 432 2468999885
Q ss_pred C--ChHHHHHHHHHHHHHHhch
Q 018172 332 S--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 332 ~--~~e~~~~~~~~l~~~~~~~ 351 (360)
. +++++++++++|++++++.
T Consensus 373 ~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 373 AAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred CCCCHHHHHHHHHHHHHHHHHh
Confidence 4 8999999999999988653
No 140
>PRK06460 hypothetical protein; Provisional
Probab=99.94 E-value=9.9e-25 Score=203.95 Aligned_cols=250 Identities=14% Similarity=0.141 Sum_probs=178.3
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCC----CcHHHHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYS----QYPAETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~----~~~~~~~~~g~~~~~ 113 (360)
..+||++++++++. . ..+++++| ++++..++..++++||+ |+++.|.|. .+...++..|++++.
T Consensus 47 ~~~L~~~lA~l~g~------~-~~v~~~sG-~~ai~~~l~al~~~Gd~----Vl~~~~~~~~ty~~~~~~~~~~G~~v~~ 114 (376)
T PRK06460 47 VLELTKKIVELENA------E-MGVAFSSG-MGAISTTALALLKPGNS----VLVHRDMFGRSYRFFTDYLKNWGVNVDA 114 (376)
T ss_pred HHHHHHHHHHHhCC------C-cEEEeCCH-HHHHHHHHHHHhCCCCE----EEEecCCcCcHHHHHHHHHHhhCcEEEE
Confidence 49999999999985 3 35666555 68999999999999998 999987664 344667788999998
Q ss_pred ecCCcccccc---CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGDANTFDK---NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~~~~~~~---~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+.+.... ++++++|++++||||||.+++ +++.++|+++|+++|+|++|..+. .......+.++++.|+||.+
T Consensus 115 ~~~~~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~-~~~~l~~~~divv~S~sK~l 193 (376)
T PRK06460 115 SNPGSDNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPI-NQKPLELGADIVVHSASKFL 193 (376)
T ss_pred ECCCCHHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccc-cCChhhcCCCEEEeecceec
Confidence 8766433221 467899999999999999998 677888888999999999998542 11112345789999999988
Q ss_pred C-CCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 190 G-HAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 190 ~-~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+ ..+.++||+++ ++++++.+.+.+...+.+.++... ..++. . .++++...+++.++++.+.+.|++++.+
T Consensus 194 ~G~~~~~~G~~~~-~~~l~~~l~~~~~~~g~~~~~~~a---~~~l~---~--~~~l~~r~~~~~~n~~~l~~~L~~~p~v 264 (376)
T PRK06460 194 AGHNDVIAGLAAG-YGKLLNVIDQMRRTLGTSLDPHAA---YLTLR---G--IKTLKIRMDVINRNAEQIAEFLEGHPKV 264 (376)
T ss_pred cCCCCceEEEEec-CHHHHHHHHHHHHhcCCCCCHHHH---HHHHh---c--hhhHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 6 22468999998 899999998877665555555332 22333 2 1677788889999999999999998766
Q ss_pred ccCCCCCcc----cccccccCCCCCCcccccCCch-HHHHHHHHhh
Q 018172 269 GLPEYPLEY----CNFTGKFTNSHPGFAWLESKED-EDCEKLLRAE 309 (360)
Q Consensus 269 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~ 309 (360)
..+.+++-. +........+.+..+.+.++++ +.+.+.++.-
T Consensus 265 ~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l 310 (376)
T PRK06460 265 VKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSL 310 (376)
T ss_pred cEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhC
Confidence 544333211 1111111234556778888654 4444444443
No 141
>PLN02721 threonine aldolase
Probab=99.94 E-value=8.6e-25 Score=203.77 Aligned_cols=271 Identities=13% Similarity=0.062 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHH---HHHHhCCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPA---ETDYLRSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~---~~~~~g~~~~~~ 114 (360)
.+||++++++++. + .+++++++++++..++..+.+ +||+ |++++|+|..... .+...|.+++.+
T Consensus 43 ~~l~~~la~~~~~-------~-~~~~~~~Gs~a~~~~l~~~~~~~gd~----Vl~~~~~~~~~~~~~~~~~~~g~~~~~v 110 (353)
T PLN02721 43 LRLEEEMAKIFGK-------E-AALFVPSGTMGNLISVLVHCDVRGSE----VILGDNSHIHLYENGGISTLGGVHPRTV 110 (353)
T ss_pred HHHHHHHHHHhCC-------c-eeEEecCccHHHHHHHHHHccCCCCe----EEEcCccceehhcccchhhhcCceeEec
Confidence 8999999999985 2 245555556666677777776 8998 9999999865554 567789999988
Q ss_pred cCCccc-cc-----c--C-------CCeeEEEEcC-CCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC-----C
Q 018172 115 DGDANT-FD-----K--N-------NGAYIEVVNS-PNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ-----Y 169 (360)
Q Consensus 115 ~~~~~~-~~-----~--~-------~~~~~i~~~~-p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~-----~ 169 (360)
+.+.++ ++ . + +++++|++++ +|||||..++ +.+.++|+++|+++|+|++|.... .
T Consensus 111 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~ 190 (353)
T PLN02721 111 KNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV 190 (353)
T ss_pred CCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC
Confidence 765332 21 1 2 5789999866 5789999987 366778988999999999986432 1
Q ss_pred CcCCCCCCccEEEeccccccCCCCceEEE-EeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHH
Q 018172 170 TPITGAADHDIMLFTLSKCTGHAGSRIGW-ALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGR 248 (360)
Q Consensus 170 ~~~~~~~~~~i~~~S~sK~~~~~G~r~G~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 248 (360)
.......+.+.++.|+||.++.+ +|| ++. ++++++.+...+.....+.+...+.++.... .+ +.+.++.+
T Consensus 191 ~~~~~~~~~d~~~~s~sK~l~~~---~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l----~~~~~~~~ 261 (353)
T PLN02721 191 PVHRLVKAADSVSVCLSKGLGAP---VGSVIVG-SKSFIRKAKRLRKTLGGGMRQVGVLAAAALV-AL----QENVPKLE 261 (353)
T ss_pred CHHHHhhhCCEEEEecccccCCc---eeeEEec-CHHHHHhHHHHHHhcCCCeehhHHHHHHHHH-HH----HHHHHHHH
Confidence 11101224556777899998743 566 555 8899988877665433333333333322211 11 14444444
Q ss_pred HHHHHHHHHHHHHHHhcCCccc-CCCCCcccccccccCCCCCCcccccCCc-----hHHHHHHHHhhCeeeeCCCCCCCC
Q 018172 249 RLMSERWNMLRQVIRQSGVFGL-PEYPLEYCNFTGKFTNSHPGFAWLESKE-----DEDCEKLLRAERIMARGGRRFGAD 322 (360)
Q Consensus 249 ~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~gI~~~pg~~f~~~ 322 (360)
+. .++++.+.+.|++++++.. ..+ +.++|+|++++. ...+.+.|.++||.++|+.
T Consensus 262 ~~-~~~~~~l~~~L~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~----- 322 (353)
T PLN02721 262 DD-HKKAKLLAEGLNQIKGLRVNVAA-------------VETNIVYFDITDGSRITAEKLCKSLEEHGVLLMPGN----- 322 (353)
T ss_pred HH-HHHHHHHHHHHHhCCCcEEecCC-------------ccceEEEEEccCCccccHHHHHHHHHhCCcEEecCC-----
Confidence 43 5667899999998865532 222 223467777753 2677888889999999973
Q ss_pred CCeEEEEecC--ChHHHHHHHHHHHHHHh
Q 018172 323 AKYARVSMLS--REEIFNIFLERLSAIQG 349 (360)
Q Consensus 323 ~~~~R~s~~~--~~e~~~~~~~~l~~~~~ 349 (360)
.+++|++++. +++++++++++|++++.
T Consensus 323 ~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 323 SSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred CceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 5689999853 99999999999998765
No 142
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.94 E-value=2.2e-24 Score=203.44 Aligned_cols=287 Identities=14% Similarity=0.083 Sum_probs=202.2
Q ss_pred cccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHH
Q 018172 26 YLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETD 105 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~ 105 (360)
.|....|. .++++++++++...-. .++++++++| ++++..++..++++||. |+++.|+|..+...+.
T Consensus 69 ~~~~~~g~-----~~l~~~l~~~l~~~~g---~~~~i~~~sG-~~a~~~a~~~~~~~gd~----vi~~~~~~~~~~~~~~ 135 (385)
T TIGR01825 69 AVRTIAGT-----LRLHEELEEKLAKFKK---TEAALVFQSG-FNTNQGVLSALLRKGDI----VLSDELNHASIIDGLR 135 (385)
T ss_pred ccCcccCC-----cHHHHHHHHHHHHHhC---CCcEEEECcH-HHHHHHHHHHhCCCCCE----EEEEccccHHHHHHHH
Confidence 45566676 7778777776543211 2346888888 55666788888999998 9999999999988888
Q ss_pred HhCCeeeeec-CCcccccc------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC-------
Q 018172 106 YLRSGLYKWD-GDANTFDK------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT------- 170 (360)
Q Consensus 106 ~~g~~~~~~~-~~~~~~~~------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~------- 170 (360)
..|.+++.++ +|.+.++. ++++++|++++++||||.+.+ +.+.++|+++|+++|+|++|..+.+.
T Consensus 136 ~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~ 215 (385)
T TIGR01825 136 LTKATKKIYKHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTV 215 (385)
T ss_pred hcCCceEEeCCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccH
Confidence 8888887664 44433322 246889999999999999888 77888899999999999999753221
Q ss_pred -cCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHh-hc-cccCChHHHHHHHHHhcccCCCchhHHHHH
Q 018172 171 -PITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIE-LG-SIGVSKESQLRAAKILGIVSDDYPNFFEYG 247 (360)
Q Consensus 171 -~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~-~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (360)
...-..++++++.||||.++++| ||+++ ++++++.+..... .. +...+++.+.++.++++.+.+. .+.
T Consensus 216 ~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-----~~~ 286 (385)
T TIGR01825 216 HHFGLEDKVDIQVGTLSKAIGVVG---GYAAG-HKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRS-----PEL 286 (385)
T ss_pred hhcCCCcCCcEEEEeccHHhhcCC---CEEec-CHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcC-----HHH
Confidence 01113577999999999998776 99988 8889888876542 21 2234567777777777643221 245
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhhCeeeeCCCCCCC---
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERIMARGGRRFGA--- 321 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~pg~~f~~--- 321 (360)
.+++.++++++.+.|+++ ++.+..+.+ .++++.++. ...+.+.|.++||.+++ ..|+.
T Consensus 287 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~L~~~gi~v~~-~~~~~~~~ 350 (385)
T TIGR01825 287 MERLWDNTRFFKAGLGKL-GYDTGGSET--------------PITPVVIGDEKAAQEFSRRLFDEGIFAQS-IVFPTVPR 350 (385)
T ss_pred HHHHHHHHHHHHHHHHHc-CCCCCCCCC--------------CEEEEEECCHHHHHHHHHHHHHCCcEEcc-cCCCCCCC
Confidence 666778899999999887 344433322 133333332 25566666677999854 33432
Q ss_pred CCCeEEEEec--CChHHHHHHHHHHHHHHhc
Q 018172 322 DAKYARVSML--SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 322 ~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~ 350 (360)
..+++|+++. .++|++++++++|+++++.
T Consensus 351 ~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 351 GTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred CCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 3468999874 4999999999999998853
No 143
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.94 E-value=2.1e-24 Score=203.52 Aligned_cols=274 Identities=18% Similarity=0.158 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC-
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD- 117 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~- 117 (360)
.++++.++++++ .++.+++++| ++++..++..++++||. |++++|+|+.+...++..|.+++.++..
T Consensus 87 ~~l~~~la~~~~-------~~~~i~~~~g-~~~~~~~l~~~~~~gd~----V~~~~~~~~~~~~~~~~~g~~~~~~~~~d 154 (385)
T PRK05958 87 EALEEELAEWFG-------AERALLFSSG-YAANLAVLTALAGKGDL----IVSDKLNHASLIDGARLSRARVRRYPHND 154 (385)
T ss_pred HHHHHHHHHHhC-------CCcEEEECcH-HHHHHHHHHHhCCCCCE----EEEeCccCHHHHHHHHhcCCceEEeCCCC
Confidence 677777888776 2445555554 56666677888999998 9999999999999999999998888643
Q ss_pred cccccc---C--CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC-------c--CCCCCCccEEE
Q 018172 118 ANTFDK---N--NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT-------P--ITGAADHDIML 182 (360)
Q Consensus 118 ~~~~~~---~--~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~-------~--~~~~~~~~i~~ 182 (360)
.+.++. + +++.++++.+++||||...+ +.+.++|+++|+++|+|++|..+.+. . ......+++++
T Consensus 155 ~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~ 234 (385)
T PRK05958 155 VDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILV 234 (385)
T ss_pred HHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEE
Confidence 333322 1 23566777788999998877 77888899999999999999743221 0 01234577999
Q ss_pred eccccccCCCCceEEEEeecCHHHHHHHHHHHh-hc-cccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHH
Q 018172 183 FTLSKCTGHAGSRIGWALVKDTEVARKMTRFIE-LG-SIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQ 260 (360)
Q Consensus 183 ~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~-~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 260 (360)
.|+||.++++| ||+++ ++++.+.+.+... .. +.+.++..+.++.++++.+.. . ++.++.+.++++++.+
T Consensus 235 ~s~sK~~~~~G---g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~----~-~~~~~~~~~~~~~l~~ 305 (385)
T PRK05958 235 GTLGKALGSSG---AAVLG-SETLIDYLINRARPFIFTTALPPAQAAAARAALRILRR----E-PERRERLAALIARLRA 305 (385)
T ss_pred EechhhcccCC---cEEEc-CHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhc----C-HHHHHHHHHHHHHHHH
Confidence 99999999777 89988 7888888754432 11 223445554455566664322 1 5678889999999999
Q ss_pred HHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCC--CCCeEEEEecC--C
Q 018172 261 VIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGA--DAKYARVSMLS--R 333 (360)
Q Consensus 261 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~--~~~~~R~s~~~--~ 333 (360)
.|+..+ +.+..+ .++|+++.+++. ..+.+.|.++||.+.++..+.. +.+++|+++.. +
T Consensus 306 ~L~~~~-~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~ 370 (385)
T PRK05958 306 GLRALG-FQLMDS--------------QSAIQPLIVGDNERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHT 370 (385)
T ss_pred HHHHcC-CCcCCC--------------CCCEEEEEeCCHHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCC
Confidence 999874 333322 233667777642 5677778889999998654432 34699999963 8
Q ss_pred hHHHHHHHHHHHHHH
Q 018172 334 EEIFNIFLERLSAIQ 348 (360)
Q Consensus 334 ~e~~~~~~~~l~~~~ 348 (360)
++++++++++|.+++
T Consensus 371 ~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 371 EADIDRLLEALAEAL 385 (385)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999998764
No 144
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.94 E-value=2.9e-24 Score=200.24 Aligned_cols=283 Identities=19% Similarity=0.211 Sum_probs=197.2
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH----HHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET----DYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~----~~~g~~~~~ 113 (360)
..+|+++++++++ + +.+++ +++++++..++.+++++||+ |+++.|+|..+...+ ...|++++.
T Consensus 53 ~~~Le~~lA~l~~-------~-~~v~~-~sG~~Ai~~~l~all~~Gd~----Vl~~~~~y~~~~~~~~~~l~~~G~~v~~ 119 (366)
T PRK07582 53 WRALEAALGELEG-------A-EALVF-PSGMAAITAVLRALLRPGDT----VVVPADGYYQVRALAREYLAPLGVTVRE 119 (366)
T ss_pred HHHHHHHHHHHcC-------C-CEEEE-CCHHHHHHHHHHHhcCCCCE----EEEeCCCcHhHHHHHHHHHhcCeEEEEE
Confidence 4999999999883 3 34555 55568999999999999998 999999999887755 346999999
Q ss_pred ecCCccccccCCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCC-CCCcCCCCCCccEEEecccccc-C
Q 018172 114 WDGDANTFDKNNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWP-QYTPITGAADHDIMLFTLSKCT-G 190 (360)
Q Consensus 114 ~~~~~~~~~~~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~-~~~~~~~~~~~~i~~~S~sK~~-~ 190 (360)
++.+.+.-...+++++|++++|+||||.+.+ +.+.++|+++|+++|+|++|..+ ...++ ..+.+++++|+||.+ |
T Consensus 120 v~~~~~~~~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~--~~g~Divv~S~sK~l~G 197 (366)
T PRK07582 120 APTAGMAEAALAGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQRPL--ELGADLVVASDTKALTG 197 (366)
T ss_pred ECCCChHHHhccCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccccCch--hcCCcEEEecccccccC
Confidence 9876432123467899999999999998877 77788888899999999998632 12222 245679999999988 4
Q ss_pred CCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q 018172 191 HAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGL 270 (360)
Q Consensus 191 ~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 270 (360)
.+|+|+||++++++++.+.+...+...+.+.+++....+...++ .++...++.+++...+.+.|.+++.+..
T Consensus 198 ~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~--------tl~~R~~~~~~na~~la~~L~~~p~v~~ 269 (366)
T PRK07582 198 HSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLG--------TLGLRFARQCANALAVAELLAGHPAVRG 269 (366)
T ss_pred CCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccc--------cHHHHHHHHHHHHHHHHHHHHhCCCccE
Confidence 57899999998668898988887776666777777666655444 1333335556788888999999887665
Q ss_pred CCCCCcc----cccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCC---------------CCCCeEEEEec
Q 018172 271 PEYPLEY----CNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFG---------------ADAKYARVSML 331 (360)
Q Consensus 271 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~---------------~~~~~~R~s~~ 331 (360)
+.+++.. +........+.+..+.+.+++.+.+.+.+.+.++... +..+| ..++.+|+|+.
T Consensus 270 v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~~~~~~~~~~~l~~~~~-~~s~G~~~sl~~~~~~~~~~~~~~liR~svG 348 (366)
T PRK07582 270 VRYPGLPGDPAHEVAARQMRRFGGLVSFELADAAAAERFVAASRLVVA-ATSFGGVHTSADRRARWGDAVPEGFVRLSCG 348 (366)
T ss_pred EECCCCCCCccHHHHHhhCCCCcceEEEEeCCHHHHHHHHHhCCccee-cccCCCccchhhhHHHcCCCCCCCeEEEEec
Confidence 4443311 0011111123455677788765777777777776543 22222 23468999996
Q ss_pred C--ChHHHHHHHHHH
Q 018172 332 S--REEIFNIFLERL 344 (360)
Q Consensus 332 ~--~~e~~~~~~~~l 344 (360)
. .++.++.+.++|
T Consensus 349 lE~~~dli~dl~~al 363 (366)
T PRK07582 349 IEDTDDLVADLERAL 363 (366)
T ss_pred cCCHHHHHHHHHHHH
Confidence 6 233344444443
No 145
>PRK07179 hypothetical protein; Provisional
Probab=99.94 E-value=3e-24 Score=203.75 Aligned_cols=277 Identities=14% Similarity=0.097 Sum_probs=200.4
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC-
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG- 116 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~- 116 (360)
..+|+++++++++. + .+++++|+++++..++.++..+|++ |+++.+.|.++...++..|.+++.++.
T Consensus 101 ~~~le~~la~~~g~-------~-~~~~~~sG~~An~~~l~~l~~~g~~----v~~~~~~h~s~~~~~~~~g~~~~~~~~~ 168 (407)
T PRK07179 101 KPQFEKKLAAFTGF-------E-SCLLCQSGWAANVGLLQTIADPNTP----VYIDFFAHMSLWEGVRAAGAQAHPFRHN 168 (407)
T ss_pred HHHHHHHHHHHhCC-------C-cEEEECCHHHHHHHHHHHhCCCCCE----EEEECCcCHHHHHHHHHCCCeEEEecCC
Confidence 38999999999984 3 5678999999999999999999988 999999999998888888998887753
Q ss_pred Ccccccc---CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC----cCC---CC-CCccEEEec
Q 018172 117 DANTFDK---NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT----PIT---GA-ADHDIMLFT 184 (360)
Q Consensus 117 ~~~~~~~---~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~----~~~---~~-~~~~i~~~S 184 (360)
|.+.+.. +.++++|++++|+||||.+++ +++.++|+++|+++|+||+|..+... ... +. ...++++.|
T Consensus 169 d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S 248 (407)
T PRK07179 169 DVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITAS 248 (407)
T ss_pred CHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEee
Confidence 4444433 224788999999999999998 67888899999999999999853211 111 11 223689999
Q ss_pred cccccCCCCceEEEEeecCHHHHHHHHHHHhh--ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 018172 185 LSKCTGHAGSRIGWALVKDTEVARKMTRFIEL--GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVI 262 (360)
Q Consensus 185 ~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 262 (360)
+||++|. |+||+++ ++++++.+...... .+.+.++....++.++++.+ ....+.+++++++++++.+.|
T Consensus 249 ~sK~~g~---~~G~l~~-~~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~-----~~~~~~~~~l~~~~~~l~~~L 319 (407)
T PRK07179 249 LAKAFAG---RAGIITC-PRELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVI-----ESADDRRARLHANARFLREGL 319 (407)
T ss_pred chHhhhc---cCeEEEe-CHHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHH-----hcCHHHHHHHHHHHHHHHHHH
Confidence 9999872 6899998 78888877654432 12223333333344455533 223457788999999999999
Q ss_pred HhcCCcccCCCCCcccccccccCCCCCCcccccCCc--h-HHHHHHHHhhCeeeeCCCCCC--CCCCeEEEEecC--ChH
Q 018172 263 RQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--D-EDCEKLLRAERIMARGGRRFG--ADAKYARVSMLS--REE 335 (360)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~l~~~gI~~~pg~~f~--~~~~~~R~s~~~--~~e 335 (360)
+++ ++.+. +.++++++.+++ . ..+.+.|.++||.+......+ ...+++||++.. ++|
T Consensus 320 ~~~-g~~v~---------------~~~~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~e 383 (407)
T PRK07179 320 SEL-GYNIR---------------SESQIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTAS 383 (407)
T ss_pred HHc-CCCCC---------------CCCCEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHH
Confidence 987 33332 122366666654 2 667788889999743211011 125799999975 999
Q ss_pred HHHHHHHHHHHHHhch
Q 018172 336 IFNIFLERLSAIQGGS 351 (360)
Q Consensus 336 ~~~~~~~~l~~~~~~~ 351 (360)
++++++++|++++.+.
T Consensus 384 di~~~~~~l~~~~~~~ 399 (407)
T PRK07179 384 DLDRVLEVCREARDEV 399 (407)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998764
No 146
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.93 E-value=1.2e-24 Score=204.50 Aligned_cols=285 Identities=15% Similarity=0.094 Sum_probs=204.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH----HHHHhCCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA----ETDYLRSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~----~~~~~g~~~~~~ 114 (360)
.++|+.++++++. .+.++|++|+|++++++.++.+++++||+ |+++.++|..+.. +++..|.+++.+
T Consensus 47 ~~~~~~la~~~~~-----~~~~~v~~~~g~t~al~~~~~~~~~~gd~----vl~~~~~~~~~~~~~~~~~~~~g~~~~~v 117 (376)
T TIGR01977 47 EETRQLLAKLFNA-----PSSAHVVFTNNATTALNIALKGLLKEGDH----VITTPMEHNSVARPLECLKEQIGVEITIV 117 (376)
T ss_pred HHHHHHHHHHhCc-----CCCCeEEEeCCHHHHHHHHHHhccCCCCE----EEECcchhhHHHHHHHHHHHHcCcEEEEE
Confidence 8999999999985 13348999999999999999999999998 9999999988654 445569999988
Q ss_pred cCCccc-ccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecc
Q 018172 115 DGDANT-FDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTL 185 (360)
Q Consensus 115 ~~~~~~-~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~ 185 (360)
+.+.++ ++. +++++++++++|+||||..++ +++.++|+++|+++|+|++++.+..+......+.++++.|+
T Consensus 118 ~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~ 197 (376)
T TIGR01977 118 KCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTG 197 (376)
T ss_pred ecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccCCCchhcCCCEEEecc
Confidence 765432 111 467899999999999999999 67788898899999999999876554444556789999999
Q ss_pred ccccCC-CCceEEEEeecCHHHHHHHHHH----------------HhhccccCChHHHHHHHHHhcccCCCchhHHHHHH
Q 018172 186 SKCTGH-AGSRIGWALVKDTEVARKMTRF----------------IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGR 248 (360)
Q Consensus 186 sK~~~~-~G~r~G~~~~~~~~~~~~l~~~----------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 248 (360)
+|.++. +| .|.++..+...++.+... ..+...+.+.....++.++++.+.. ..+++++
T Consensus 198 ~K~l~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~---~g~~~~~ 272 (376)
T TIGR01977 198 HKGLLGPQG--TGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEK---IGIANIA 272 (376)
T ss_pred cccccCCCC--ceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHH---hCHHHHH
Confidence 997753 34 566655343321211110 0011224455556666666665432 4467788
Q ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhh-CeeeeCCCCCC-----
Q 018172 249 RLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAE-RIMARGGRRFG----- 320 (360)
Q Consensus 249 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~-gI~~~pg~~f~----- 320 (360)
++.+++.+++.+.|.+.+++.+..+... ......+++.+++ .+.+.+.|.++ ||.+.+|..+.
T Consensus 273 ~~~~~l~~~~~~~l~~~~~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~ 343 (376)
T TIGR01977 273 KKECMLTEKLLNGLREINKVKIYGPADP---------ANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGLHCAPLAHK 343 (376)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEeCCCCc---------cccCCeEEEEECCCCHHHHHHHHhccCCEEEEcccccchHHHH
Confidence 8889999999999998876665443210 0112245555553 26788888777 99999987553
Q ss_pred ---C-CCCeEEEEecC--ChHHHHHHHHHHHH
Q 018172 321 ---A-DAKYARVSMLS--REEIFNIFLERLSA 346 (360)
Q Consensus 321 ---~-~~~~~R~s~~~--~~e~~~~~~~~l~~ 346 (360)
. ..+.+|+++.. +++++++++++|++
T Consensus 344 ~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 344 TIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred HhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 1 35789999866 99999999999976
No 147
>PLN02242 methionine gamma-lyase
Probab=99.93 E-value=2.2e-24 Score=203.64 Aligned_cols=214 Identities=14% Similarity=0.109 Sum_probs=166.0
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH-----HHhCCeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET-----DYLRSGLY 112 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~-----~~~g~~~~ 112 (360)
..+|++.+++++|. + .+++++|+++++..++..++++||+ |+++.|.|+.+...+ +..|.+++
T Consensus 78 ~~~LE~~lA~l~g~-------~-~~l~~~sG~~Ai~~al~al~~~GD~----Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~ 145 (418)
T PLN02242 78 VLNLGRQMAALEGT-------E-AAYCTASGMSAISSVLLQLCSSGGH----VVASNTLYGGTHALLAHFLPRKCNITTT 145 (418)
T ss_pred HHHHHHHHHHHhCC-------C-eEEEEccHHHHHHHHHHHHhCCCCE----EEEcCCcHHHHHHHHHHhhhhccCceEE
Confidence 48999999999985 3 5778999999999999999999998 999999999887765 34688887
Q ss_pred eecCC-cccccc--CC-CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccc
Q 018172 113 KWDGD-ANTFDK--NN-GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSK 187 (360)
Q Consensus 113 ~~~~~-~~~~~~--~~-~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK 187 (360)
.++.+ .+.+.. ++ ++++|++++|+||||.+++ +.+.++|+++++++|+|++|....+.+ ...+.+++++|+||
T Consensus 146 ~~d~~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~~--~~~g~divv~S~SK 223 (418)
T PLN02242 146 FVDITDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLSP--ARLGADVVVHSISK 223 (418)
T ss_pred EcCCCCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCCH--HHcCCcEEEEeCcc
Confidence 77653 444433 44 5899999999999999988 677888888999999999997433322 23357899999999
Q ss_pred ccCCCCce-EEEEeecCHHHHHHHHHHHhh--ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 018172 188 CTGHAGSR-IGWALVKDTEVARKMTRFIEL--GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQ 264 (360)
Q Consensus 188 ~~~~~G~r-~G~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 264 (360)
.++.+|++ .||+++ ++++++.+.+.+.. ...+.+...|.++..+.. + ..+....++++++++++.+.|++
T Consensus 224 ~l~g~g~~~gG~iv~-~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~-l-----~tl~~r~~~~~~~a~~la~~L~~ 296 (418)
T PLN02242 224 FISGGADIIAGAVCG-PAELVNSMMDLHHGALMLLGPTMNPKVAFELSER-L-----PHLSLRMKEHCRRAMEYAKRMKE 296 (418)
T ss_pred ccCCCCCceEEEEEc-CHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcC-C-----CcHHHHHHHHHHHHHHHHHHHHh
Confidence 99888988 588887 88899988876542 234555566666655443 1 34555667889999999999999
Q ss_pred cCCcccCCC
Q 018172 265 SGVFGLPEY 273 (360)
Q Consensus 265 ~~~~~~~~~ 273 (360)
++ ..+..|
T Consensus 297 ~~-~~V~yP 304 (418)
T PLN02242 297 LG-LKVIYP 304 (418)
T ss_pred CC-CEEECC
Confidence 95 444433
No 148
>PRK10534 L-threonine aldolase; Provisional
Probab=99.93 E-value=2.1e-24 Score=199.54 Aligned_cols=274 Identities=13% Similarity=0.111 Sum_probs=185.0
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCC-cHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQ-YPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~-~~~ 102 (360)
...|++..+. .+|++++++++|. + .+++++|+++++.+.+..++++||+ |+++.|+|.. +..
T Consensus 27 ~~~Y~~~~~~-----~~L~~~la~~~g~------~--~~~v~~~g~~a~~~~l~~~~~~gd~----vi~~~~~~~~~~~~ 89 (333)
T PRK10534 27 DDVYGDDPTV-----NALQDYAAELSGK------E--AALFLPTGTQANLVALLSHCERGEE----YIVGQAAHNYLYEA 89 (333)
T ss_pred CcccCCCHHH-----HHHHHHHHHHhCC------C--eEEEeCchHHHHHHHHHHhcCCCCe----eEEechhhhhHhcC
Confidence 3457544444 9999999999995 3 4567777888888888888999998 9999888864 332
Q ss_pred H-HHHhC-CeeeeecCCc------ccccc--CC------CeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEee
Q 018172 103 E-TDYLR-SGLYKWDGDA------NTFDK--NN------GAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDL 162 (360)
Q Consensus 103 ~-~~~~g-~~~~~~~~~~------~~~~~--~~------~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ 162 (360)
. +...| .+++.++.+. +.+.. .+ ++++|+++||+ ||.+++. .+.++|+++++++++||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDE 167 (333)
T PRK10534 90 GGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNLALHVDG 167 (333)
T ss_pred CchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeH
Confidence 1 34444 6777665442 22211 22 58899999765 5999883 23457787899999999
Q ss_pred cccCCCC----CcCCC-CCCccEEEeccccccCCCCceEE-EEeecCHHHHHHHHHHHhhcccc--CChHHHHHHHHHhc
Q 018172 163 AYYWPQY----TPITG-AADHDIMLFTLSKCTGHAGSRIG-WALVKDTEVARKMTRFIELGSIG--VSKESQLRAAKILG 234 (360)
Q Consensus 163 ay~~~~~----~~~~~-~~~~~i~~~S~sK~~~~~G~r~G-~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~l~ 234 (360)
+|.+... ..... ......++.||||.|+++ +| |+++ ++++++.+.+.+..+..+ .+.+.|.++.+.++
T Consensus 168 A~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~---~G~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~ 243 (333)
T PRK10534 168 ARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTP---VGSLLVG-NRDYIKRARRWRKMTGGGMRQAGILAAAGLYALK 243 (333)
T ss_pred HHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCc---ccceEEc-CHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHH
Confidence 9874211 11111 011123345899998865 67 6777 899999998877654333 23355555555553
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCee
Q 018172 235 IVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIM 312 (360)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~ 312 (360)
...+.++ ..+++|+++.+.|++++ +.+.. +.++|+|+++++ ...+.+.|+++||.
T Consensus 244 -------~~~~~~~-~~~~~r~~l~~~L~~~g-~~~~~--------------~~~nfv~~~~~~~~~~~~~~~l~~~gi~ 300 (333)
T PRK10534 244 -------HNVARLQ-EDHDNAAWLAEQLREAG-ADVMR--------------QDTNMLFVRVGEEQAAALGEYMRERNVL 300 (333)
T ss_pred -------hhHHHHH-HHHHHHHHHHHHHHhCC-CccCC--------------CCceEEEEECCchhHHHHHHHHHHcCee
Confidence 2222223 34456789999999884 44332 345588998864 36778999999999
Q ss_pred eeCCCCCCCCCCeEEEEec--CChHHHHHHHHHHHHHHhc
Q 018172 313 ARGGRRFGADAKYARVSML--SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 313 ~~pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~ 350 (360)
++||. ++|++.. .++|++++++++|++++.+
T Consensus 301 v~~~~-------~~rl~~~~r~t~e~~~~~~~~l~~~~~~ 333 (333)
T PRK10534 301 INASP-------IVRLVTHLDVSREQLAEVVAHWRAFLAR 333 (333)
T ss_pred ecCCc-------eEEEEEEeCCCHHHHHHHHHHHHHHhcC
Confidence 99863 5788764 3899999999999988764
No 149
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=5.3e-24 Score=199.30 Aligned_cols=241 Identities=14% Similarity=0.111 Sum_probs=180.3
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHH----hCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDY----LRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~----~g~~~~~ 113 (360)
..+|+++++++++. + ++++++|+++++..++..++++||+ |+++.|+|+.....+.. .|.++..
T Consensus 54 ~~~L~~~lA~l~g~-------~-~~i~~~sg~~Ai~~~l~~l~~~GD~----Vl~~~~~y~~~~~~~~~~~~~~gi~v~~ 121 (386)
T PRK08045 54 RDVVQRALAELEGG-------A-GAVLTNTGMSAIHLVTTVFLKPGDL----LVAPHDCYGGSYRLFDSLAKRGCYRVLF 121 (386)
T ss_pred HHHHHHHHHHHhCC-------C-eEEEECCHHHHHHHHHHHHcCCCCE----EEEcCCCcHHHHHHHHHHHhhCCeEEEE
Confidence 48999999999883 3 6999999999999999999999998 99999999975554433 3446665
Q ss_pred ecC-Ccccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDG-DANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~-~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++. |.+.+.. ++++++|++++||||||.+++ +.+.++|+++|+++|+|++|..+... .+-..+.+++++|++|.+
T Consensus 122 vd~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~-~pl~~gaDivv~S~tK~l 200 (386)
T PRK08045 122 VDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQ-NPLALGADLVLHSCTKYL 200 (386)
T ss_pred eCCCCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-CchhhCCCEEEeecceec
Confidence 542 3333332 467899999999999999998 67778888899999999999865321 122345579999999988
Q ss_pred C-CCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 190 G-HAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 190 ~-~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+ ..+.+.|++++.++++.+.+...+...+.+.+++.+..+...++ .++...++..++...+.+.|++++.+
T Consensus 201 ~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~--------tl~~R~~~~~~na~~la~~L~~~p~v 272 (386)
T PRK08045 201 NGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLR--------TLVPRMELAQRNAQAIVKYLQTQPLV 272 (386)
T ss_pred cCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhc--------cHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 5 56788999988678888888877777788899999988877665 26667777788889999999999876
Q ss_pred ccCCCCCcc----cccccccCCCCCCcccccCCch
Q 018172 269 GLPEYPLEY----CNFTGKFTNSHPGFAWLESKED 299 (360)
Q Consensus 269 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
..+.+++.. +........+.+..+.+.++++
T Consensus 273 ~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~ 307 (386)
T PRK08045 273 KKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD 307 (386)
T ss_pred eEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCc
Confidence 654443321 1111111234455677888654
No 150
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.93 E-value=1.9e-24 Score=203.40 Aligned_cols=301 Identities=12% Similarity=0.099 Sum_probs=207.1
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|++..|+ ++||++++++++. +++++|+|+++++++++.+++++||. | +++|.|..+...+
T Consensus 47 ~~Y~~~~g~-----~~Leeaia~~~g~--------~~vv~t~~Gt~Al~la~~al~~pGD~----V-~~~~~f~~~~~~i 108 (431)
T cd00617 47 EAYAGSKSF-----YDLEDAVQDLFGF--------KHIIPTHQGRGAENILFSILLKPGRT----V-PSNMHFDTTRGHI 108 (431)
T ss_pred CccCCCCCH-----HHHHHHHHHHHCC--------CeEEEcCCHHHHHHHHHHHhCCCCCE----E-ccCCcccchHHHH
Confidence 359999988 9999999999995 37999999999999999999999996 6 6999999999999
Q ss_pred HHhCCeeeeecCCcc---------c--ccc-------CC----CeeEEEEcCCCCCC-cccch----HHHHHHhhhcCcE
Q 018172 105 DYLRSGLYKWDGDAN---------T--FDK-------NN----GAYIEVVNSPNNPD-GTIRE----AVLAKVNRSAEGK 157 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~---------~--~~~-------~~----~~~~i~~~~p~NPt-G~~~~----~~~~~~~~~~~~~ 157 (360)
...|++++.++++.. . ++. ++ ++++|++++||||+ |.+++ +.+.++|+++|++
T Consensus 109 ~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~ 188 (431)
T cd00617 109 EANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIP 188 (431)
T ss_pred HhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 999999998877532 1 111 22 37899999999998 89887 3557889999999
Q ss_pred EEEeecccCCCCC-------cCC--CCCCccEEEeccccccCCCCce------EEEEeecCHHHHHHHHHHH----hhcc
Q 018172 158 LIHDLAYYWPQYT-------PIT--GAADHDIMLFTLSKCTGHAGSR------IGWALVKDTEVARKMTRFI----ELGS 218 (360)
Q Consensus 158 li~D~ay~~~~~~-------~~~--~~~~~~i~~~S~sK~~~~~G~r------~G~~~~~~~~~~~~l~~~~----~~~~ 218 (360)
+|+|+++...... ... ...+.++.++|++|.+.++|+| .||++++++++++.++... ....
T Consensus 189 li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~ 268 (431)
T cd00617 189 VVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIGGFLALRDDELYEEARQRVVLYEGFVT 268 (431)
T ss_pred EEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccceEEEeCcHHHHHHHHHhccccCCccc
Confidence 9999996532110 010 1112244567888888888887 6799996567999887532 1111
Q ss_pred cc-CChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC
Q 018172 219 IG-VSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK 297 (360)
Q Consensus 219 ~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (360)
++ .+.....+++..|....+ .+...+++. +++++.+.|.+. ++.+..|.|+++.|.+..... +..-.-.++
T Consensus 269 ~gG~~~r~~~A~A~gL~e~~~-----~~~l~~~~~-~r~~l~~~L~~~-G~~v~~P~Ggh~v~~d~~~~~-~~~~~~~~~ 340 (431)
T cd00617 269 YGGMAGRDMEALAQGLREAVE-----EDYLRHRVE-QVRYLGDRLDEA-GVPIVEPAGGHAVFIDAREFL-PHIPQEQFP 340 (431)
T ss_pred cccccHHHHHHHHHHHHhccc-----HHHHHHHHH-HHHHHHHHHHHC-CCCccCCCcceEEEEEhHHhc-CCCCcccCc
Confidence 22 233333333335542111 233444444 559999999999 567788888885554322110 000000112
Q ss_pred chHHHHHHHHhhCeeeeC-CCC-CC--C--------CCCeEEEEecC---ChHHHHHHHHHHHHHHhch
Q 018172 298 EDEDCEKLLRAERIMARG-GRR-FG--A--------DAKYARVSMLS---REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 298 ~~~~~~~~l~~~gI~~~p-g~~-f~--~--------~~~~~R~s~~~---~~e~~~~~~~~l~~~~~~~ 351 (360)
+.+++..++.+.||.+.- |.. ++ . ....+|+.+-. +.+.++...++|.++.++.
T Consensus 341 ~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~ 409 (431)
T cd00617 341 AQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYERR 409 (431)
T ss_pred HHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhhH
Confidence 337778999999999643 441 11 1 13679999855 8899999999999999764
No 151
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.93 E-value=4.7e-24 Score=199.56 Aligned_cols=296 Identities=14% Similarity=0.129 Sum_probs=201.2
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
+++|+++. ..+|+++++++.+. +++++|+|+++++..++..++++||+ |+++.|+|......
T Consensus 45 Y~R~~~p~------~~~le~~lA~l~g~--------~~v~~~~gg~~Ai~~~l~all~~GD~----Vl~~~p~y~~~~~~ 106 (382)
T TIGR02080 45 YSRSGNPT------RDLLQQALAELEGG--------AGAVVTNTGMSAIHLVTTALLGPDDL----LVAPHDCYGGTYRL 106 (382)
T ss_pred ccCCCCch------HHHHHHHHHHHhCC--------CcEEEEcCHHHHHHHHHHHHcCCCCE----EEEcCCCcHHHHHH
Confidence 45565444 38999999999983 37999999999999999999999998 99999999976654
Q ss_pred HHH----hCCeeeeecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC-CcCCC
Q 018172 104 TDY----LRSGLYKWDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY-TPITG 174 (360)
Q Consensus 104 ~~~----~g~~~~~~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~-~~~~~ 174 (360)
+.. .|.++..++.+ .+.+.. ++++++|++++||||||.+++ +.+.++|+++|+++|+|++|..+.. .++
T Consensus 107 ~~~~~~~~~~~v~~~d~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl-- 184 (382)
T TIGR02080 107 LNALAKKGCFRVLFVDQGDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNPL-- 184 (382)
T ss_pred HHHHHhhcCeEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCCch--
Confidence 433 25666655432 333332 467899999999999999998 6777888889999999999985432 222
Q ss_pred CCCccEEEeccccccC-CCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHH
Q 018172 175 AADHDIMLFTLSKCTG-HAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSE 253 (360)
Q Consensus 175 ~~~~~i~~~S~sK~~~-~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 253 (360)
..+.+++++|+||.++ .++++.|++++.++++.+.+...+...+.+.+++.+..+...++ . +....++..+
T Consensus 185 ~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~-------t-l~~R~~~~~~ 256 (382)
T TIGR02080 185 ALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGLR-------T-LVARMRLQQR 256 (382)
T ss_pred hhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcccc-------h-HHHHHHHHHH
Confidence 2345799999999885 57889999888678899999887777677788887766644332 3 3333556668
Q ss_pred HHHHHHHHHHhcCCcccCCCCCcc----cccccccCCCCCCcccccCCch-HHHHHHHHhhCe---eeeCCC--------
Q 018172 254 RWNMLRQVIRQSGVFGLPEYPLEY----CNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERI---MARGGR-------- 317 (360)
Q Consensus 254 ~~~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI---~~~pg~-------- 317 (360)
+...+.+.|+.++.+..+.+++.. +........+.+..+.+.++++ +.+.+.+..-.+ .+.-|.
T Consensus 257 na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p 336 (382)
T TIGR02080 257 NAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLGGLSLFTLAESLGGVESLIAHP 336 (382)
T ss_pred HHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHHcCCcceEeccCCCCcceeECC
Confidence 888889999998876654444321 1111111234556778888654 333333333232 211111
Q ss_pred --------------CCCCCCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 318 --------------RFGADAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 318 --------------~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
..|..++.+|||++.+ +.+.+++.|.+.+.
T Consensus 337 ~~~~~~~~~~~~~~~~gi~~~liRlsvGlE--~~~dl~~dl~~al~ 380 (382)
T TIGR02080 337 ATMTHAAMGPEARAEAGISDTLLRLSVGLE--DADDLIADLEQGLR 380 (382)
T ss_pred CccCcccCCHHHHHhcCCCcCeEEEEeccC--CHHHHHHHHHHHHh
Confidence 1122356899999662 23445555555554
No 152
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.93 E-value=5.4e-24 Score=200.62 Aligned_cols=273 Identities=12% Similarity=0.114 Sum_probs=187.4
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH----HHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE----TDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~----~~~~g~~~~~ 113 (360)
..+|+++++++++. + ++++++|+++++..++..++++||+ |+++.|.|..+... ++..|++++.
T Consensus 66 ~~~Le~~iA~~~g~-------~-~~l~~~sG~~Ai~~al~~ll~~Gd~----Vl~~~~~y~~~~~~~~~~~~~~G~~v~~ 133 (400)
T PRK06234 66 STEVENKLALLEGG-------E-AAVVAASGMGAISSSLWSALKAGDH----VVASDTLYGCTFALLNHGLTRYGVEVTF 133 (400)
T ss_pred HHHHHHHHHHHhCC-------C-cEEEEcCHHHHHHHHHHHHhCCCCE----EEEecCccchHHHHHHHHHhhCCeEEEE
Confidence 39999999999984 3 5788888889999999999999998 99999999876654 4668999998
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhc--CcEEEEeecccCCCCCcCCCCCCccEEEecccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSA--EGKLIHDLAYYWPQYTPITGAADHDIMLFTLSK 187 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~--~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK 187 (360)
++.+ .+.+.. ++++++|++++|+||||.+.+ +.+.++|+++ ++++|+|++|..+.... +-..+.+++++|+||
T Consensus 134 vd~~d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~-~l~~g~Divv~S~sK 212 (400)
T PRK06234 134 VDTSNLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQR-PLQLGADVVVHSATK 212 (400)
T ss_pred ECCCCHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCC-chhhCCcEEEeeccc
Confidence 8753 344433 567999999999999999988 6778888875 99999999998543221 123467899999999
Q ss_pred ccCCCCceE-EEEeecCHHHHHHHHHH--HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 018172 188 CTGHAGSRI-GWALVKDTEVARKMTRF--IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQ 264 (360)
Q Consensus 188 ~~~~~G~r~-G~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 264 (360)
.++.+|+++ ||+++ ++++++.++.. ....+.+.++.....+...++ .+....++.+++...+.+.|.+
T Consensus 213 ~l~g~g~~~gG~v~~-~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~--------tl~~r~~~~~~na~~~a~~L~~ 283 (400)
T PRK06234 213 YLNGHGDVIAGFVVG-KEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMK--------TLQIRMEKHCKNAMKVAKFLES 283 (400)
T ss_pred cccCCCCceeEEEEe-cHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccC--------cHHHHHHHHHHHHHHHHHHHHc
Confidence 998889875 89888 78888888653 223345555555544444333 2334444455777888888988
Q ss_pred cCCcccCCCCCcc----cccccccCCCCCCcccccCCch----HHHHHHHHhhCeeeeCCCCC-----------------
Q 018172 265 SGVFGLPEYPLEY----CNFTGKFTNSHPGFAWLESKED----EDCEKLLRAERIMARGGRRF----------------- 319 (360)
Q Consensus 265 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~gI~~~pg~~f----------------- 319 (360)
++.+..+.+++.. +.+......+.+.++.+.+++. ..+.+.|+--++...-|...
T Consensus 284 ~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~ 363 (400)
T PRK06234 284 HPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTAE 363 (400)
T ss_pred CCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCHH
Confidence 8766544444311 1111111223455677887643 33444554444443333211
Q ss_pred -----CCCCCeEEEEecC
Q 018172 320 -----GADAKYARVSMLS 332 (360)
Q Consensus 320 -----~~~~~~~R~s~~~ 332 (360)
|..++.+|||++.
T Consensus 364 ~~~~~gi~~~l~R~svGl 381 (400)
T PRK06234 364 ERKEAGISDGLVRLSVGL 381 (400)
T ss_pred HHHhcCCCCCeEEEEeCC
Confidence 2235689999977
No 153
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.93 E-value=1.6e-23 Score=195.55 Aligned_cols=274 Identities=14% Similarity=0.124 Sum_probs=191.3
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH----HHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA----ETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~----~~~~~g~~~~~ 113 (360)
..+|++++++++|. + . .++++|+++++..++ .++++||+ |+++.|.|+.... .+...|++++.
T Consensus 54 ~~~le~~la~l~g~------~-~-~~~~~sG~~ai~~~~-~ll~~Gd~----Vl~~~~~y~~t~~~~~~~~~~~G~~v~~ 120 (366)
T PRK08247 54 RGVLEQAIADLEGG------D-Q-GFACSSGMAAIQLVM-SLFRSGDE----LIVSSDLYGGTYRLFEEHWKKWNVRFVY 120 (366)
T ss_pred HHHHHHHHHHHhCC------C-c-EEEEcCHHHHHHHHH-HHhCCCCE----EEEecCCcCcHHHHHHHHhhccCceEEE
Confidence 48999999999995 3 2 466777789998766 57789998 9999999998644 44558999998
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+ .+.+.. ++++++|++++|+||+|...+ +.+.++|+++|+++|+|++|..+.. ..+...+.+++++|+||.+
T Consensus 121 vd~~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~-~~p~~~g~di~i~S~sK~~ 199 (366)
T PRK08247 121 VNTASLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVL-QRPLEEGADIVIHSATKYL 199 (366)
T ss_pred ECCCCHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccc-cCchhcCCcEEEeecceec
Confidence 8753 344433 468999999999999998776 6777888889999999999964321 1122356789999999998
Q ss_pred CC-CCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 190 GH-AGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 190 ~~-~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+. .+.+.|+++++++++.+.+...+...+.+.+++.|.++...++ . +....++.+++++.+.+.|++++++
T Consensus 200 ~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~-------t-l~~r~~~~~~~a~~l~~~L~~~p~v 271 (366)
T PRK08247 200 GGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMK-------T-LALRMRQHEENAKAIAAFLNEQPGV 271 (366)
T ss_pred cCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccC-------c-HHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 73 3568999998447888888877776667777887777766444 2 2334445699999999999999776
Q ss_pred cc-CCC-CCcccccccccCCCCCCcccccCCchHHHH---H----------HHHhhCeeeeCCCCC------------CC
Q 018172 269 GL-PEY-PLEYCNFTGKFTNSHPGFAWLESKEDEDCE---K----------LLRAERIMARGGRRF------------GA 321 (360)
Q Consensus 269 ~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----------~l~~~gI~~~pg~~f------------~~ 321 (360)
.. ..| .|++++| .+++.++.. + +...+.+.+.|+..+ |.
T Consensus 272 ~~v~~P~~gg~~sf--------------~~~~~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi 337 (366)
T PRK08247 272 TDVLYPGRGGMLSF--------------RLQDEEWVNPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIANGV 337 (366)
T ss_pred eEEecCCcCcEEEE--------------EECCHHHHHHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHhcCC
Confidence 64 233 4555443 333222221 1 112345556676544 22
Q ss_pred CCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 322 DAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 322 ~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
.++.+|||++.+ +.+.+++.|.+.++
T Consensus 338 ~~~~~R~svGlE--~~~dl~~dl~~al~ 363 (366)
T PRK08247 338 CNRLLRFSVGIE--NVEDLIADLKQAFK 363 (366)
T ss_pred CCCeEEEEeccC--CHHHHHHHHHHHHh
Confidence 356899998662 24455555555554
No 154
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.93 E-value=8.8e-24 Score=198.52 Aligned_cols=286 Identities=15% Similarity=0.125 Sum_probs=195.0
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH----HHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA----ETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~----~~~~~g~~~~~ 113 (360)
..+|++.++++++. + ++++++|+++++..++..++++||+ |+++.+.|.+... .+...|++++.
T Consensus 63 ~~~le~~la~l~g~-------~-~~v~~ssG~~Ai~~al~al~~~Gd~----Vi~~~~~y~~t~~~~~~~~~~~G~~v~~ 130 (390)
T PRK08133 63 VTMFQERLAALEGA-------E-ACVATASGMAAILAVVMALLQAGDH----VVSSRSLFGSTVSLFEKIFARFGIETTF 130 (390)
T ss_pred HHHHHHHHHHHhCC-------C-cEEEECCHHHHHHHHHHHHhCCCCE----EEEccCcchhHHHHHHHHHHHcCcEEEE
Confidence 48999999999984 3 5888999999999999999999998 9999999987665 34567999999
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+ .+.+.. ++++++|++++|+||||.+.+ +.+.++|+++|+++|+|++|..+.... +...+.+++++|+||.+
T Consensus 131 vd~~d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~-pl~~g~Divv~S~sK~~ 209 (390)
T PRK08133 131 VDLTDLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQ-PLKLGADVVIHSATKYL 209 (390)
T ss_pred ECCCCHHHHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCC-chhhCCcEEEeecceee
Confidence 8864 344433 468999999999999999988 677888988999999999987542211 12335689999999999
Q ss_pred CCCCceEE-EEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 190 GHAGSRIG-WALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 190 ~~~G~r~G-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+.+|.++| ++++ ++++++.+.......+...++..+.. ++..+ +.+....++..++...+.+.|++++.+
T Consensus 210 ~g~g~~~GG~vv~-~~~~~~~~~~~~~~~g~~~~~~~a~~---~l~gl-----~tl~~R~~~~~~~a~~la~~L~~~p~v 280 (390)
T PRK08133 210 DGQGRVLGGAVVG-SKELMEEVFGFLRTAGPTLSPFNAWV---FLKGL-----ETLSLRMEAHSANALALAEWLEAHPGV 280 (390)
T ss_pred cCCcceEeEEEEc-CHHHHHHHHHHHHHhCCCCCHHHHHH---HHccc-----chHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 98999985 5555 77777777665554444444444333 34322 344455555667888999999999776
Q ss_pred ccCCCCCcc----cccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCC------------------------
Q 018172 269 GLPEYPLEY----CNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRF------------------------ 319 (360)
Q Consensus 269 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f------------------------ 319 (360)
..+.+++.. +........+.+..+.+.++++ +.+.+.+.+-.+. ..+..+
T Consensus 281 ~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~-~~~~slG~~~sl~~~p~~~~~~~~~~~~~~ 359 (390)
T PRK08133 281 ERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRVIDATRLI-SITANLGDTKTTITHPATTTHGRLSPEARA 359 (390)
T ss_pred eEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHHHHhCCcc-eEeccCCCcceeeecCCCCCcccCCHHHHH
Confidence 655444421 1111111234456778888644 4444444443443 222111
Q ss_pred --CCCCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 320 --GADAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 320 --~~~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
|..++.+|||++.+ +.+.+++.|++.+
T Consensus 360 ~~gi~~~liR~svGlE--~~~dl~~dl~~al 388 (390)
T PRK08133 360 AAGITEGLIRVAVGLE--DVADIKADLARGL 388 (390)
T ss_pred hcCCCCCeEEEEeCcC--CHHHHHHHHHHHh
Confidence 22356899999663 2345555555554
No 155
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=1.1e-23 Score=198.01 Aligned_cols=289 Identities=15% Similarity=0.142 Sum_probs=197.5
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH----HHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE----TDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~----~~~~g~~~~~ 113 (360)
..+|++.+++++|. + +.++++++++++..++..++++||+ |+++.|+|...... +...|++++.
T Consensus 66 ~~~le~~lA~l~g~-------~-~~i~~ssG~~Ai~~~l~all~~GD~----Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~ 133 (398)
T PRK08249 66 VQAFEEKVRILEGA-------E-AATAFSTGMAAISNTLYTFLKPGDR----VVSIKDTYGGTNKIFTEFLPRMGVDVTL 133 (398)
T ss_pred HHHHHHHHHHHhCC-------C-eEEEeCChHHHHHHHHHHhcCCCCE----EEEcCCchHHHHHHHHHHHhhCCeEEEE
Confidence 48999999999994 3 4566666689999999999999998 99999999976543 4567888887
Q ss_pred ecC-Ccccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDG-DANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~-~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++. |.+.+.. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+.... +...+.+++++|+||.+
T Consensus 134 vd~~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~-~l~~~~Divv~S~sK~l 212 (398)
T PRK08249 134 CETGDHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQN-PLALGADLVIHSATKFL 212 (398)
T ss_pred cCCCCHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCC-chhhCCCEEeccCceec
Confidence 764 3444433 467999999999999999998 677888888999999999998542211 12346678999999999
Q ss_pred CCCCceE-EEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 190 GHAGSRI-GWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 190 ~~~G~r~-G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+.+|.++ |++++ ++++++.+...+...+.+.++..+..+...++ .+....++..++.+.+.+.|++++.+
T Consensus 213 ~g~~~~~gG~vv~-~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~--------tL~~R~~~~~~na~~la~~L~~~p~v 283 (398)
T PRK08249 213 SGHADALGGVVCG-SKELMEQVYHYREINGATMDPMSAYLILRGMK--------TLKLRVRQQQESAMALAKYLQTHPKV 283 (398)
T ss_pred CCCCCceEEEEEC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcc--------hHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 8677776 55665 88999999887776666677776666655433 33445566678888899999998876
Q ss_pred ccCCCCCcc----cccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCC------------------------
Q 018172 269 GLPEYPLEY----CNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRF------------------------ 319 (360)
Q Consensus 269 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f------------------------ 319 (360)
..+.++|-. +........+.+..+.+.++++ +.+.+.+.+-.+. ..+..+
T Consensus 284 ~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f~~~l~l~-~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~ 362 (398)
T PRK08249 284 EAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRLLPKLRYA-HRAANLGAVETIYGPARTTSHVENTLEERA 362 (398)
T ss_pred eEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHHHHhCCcc-eEccCCCCCCceeeCCcccccccCCHHHHH
Confidence 655444321 1111111224455677777644 4444444443433 112111
Q ss_pred --CCCCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 320 --GADAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 320 --~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
|..++.+|||++.+ +.+.+++.|.+.++..
T Consensus 363 ~~gi~~~liR~svGlE--~~~dl~~dl~~al~~~ 394 (398)
T PRK08249 363 ALGIPEGLVRISVGIE--DTEDLIADLEQAFAHL 394 (398)
T ss_pred hcCCCCCeEEEEeccC--CHHHHHHHHHHHHHHh
Confidence 22356799999662 2344555555555443
No 156
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=1.7e-23 Score=196.89 Aligned_cols=252 Identities=15% Similarity=0.179 Sum_probs=181.8
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc----HHHHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY----PAETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~----~~~~~~~g~~~~~ 113 (360)
..+|++.++++.+. ++++++++| ++++.+++..++++||+ |+++.|+|... ...+...|.+++.
T Consensus 62 ~~~Le~~lA~l~g~-------~~~v~~~sG-~~Ai~~~l~all~pGD~----Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~ 129 (405)
T PRK08776 62 RDLLGEALAELEGG-------AGGVITATG-MGAINLVLNALLQPGDT----LVVPHDAYGGSWRLFNALAKKGHFALIT 129 (405)
T ss_pred HHHHHHHHHHHhCC-------CceEEEcCH-HHHHHHHHHHHhCCCCE----EEEccCCchHHHHHHHHHHHhcCcEEEE
Confidence 37899999999884 345655555 79999999999999998 99999999974 3445556888888
Q ss_pred ecC-Ccccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC-CcCCCCCCccEEEeccccc
Q 018172 114 WDG-DANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY-TPITGAADHDIMLFTLSKC 188 (360)
Q Consensus 114 ~~~-~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~-~~~~~~~~~~i~~~S~sK~ 188 (360)
++. |.+.+.. ++++++|++++|+||||.+.+ +.+.++|+++|+++|+|++|..+.. .++ ..+.+++++|.+|.
T Consensus 130 v~~~d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl--~~gaDivv~S~tK~ 207 (405)
T PRK08776 130 ADLTDPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKPL--EFGADLVLHSTTKY 207 (405)
T ss_pred ECCCCHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccCCcc--cccCCEEEecCcee
Confidence 875 3344433 468999999999999999988 6777888889999999999986532 222 34667999999999
Q ss_pred cCCC-CceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018172 189 TGHA-GSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGV 267 (360)
Q Consensus 189 ~~~~-G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 267 (360)
++.+ +...|++++.++++.+.+...+...+.+.+++.+.++...+ ++++...++.+++...+.+.|++++.
T Consensus 208 l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl--------~tl~~r~~~~~~na~~la~~L~~~p~ 279 (405)
T PRK08776 208 INGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGL--------RTLDARLRVHQENADAIAALLDGHAA 279 (405)
T ss_pred ecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh--------CcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9744 57789988867888888877666556667777766665433 45677788888899999999999986
Q ss_pred cccCCCCCcc----cccccccCCCCCCcccccCCch-HHHHHHHHhhCe
Q 018172 268 FGLPEYPLEY----CNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERI 311 (360)
Q Consensus 268 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI 311 (360)
+..+.+++.. +........+.+..+.+.++++ +.+.+.+.+-.+
T Consensus 280 v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l 328 (405)
T PRK08776 280 VNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLRY 328 (405)
T ss_pred eeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHHHHHhCCc
Confidence 6554443321 1111112234556778888654 444444444343
No 157
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.93 E-value=1.6e-23 Score=197.95 Aligned_cols=289 Identities=13% Similarity=0.022 Sum_probs=211.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc--HHHHHHhCCeeeeecC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY--PAETDYLRSGLYKWDG 116 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~--~~~~~~~g~~~~~~~~ 116 (360)
+++|+.++++++. ...+.+++++|+|+++..++..++++||+ |+++++.|.+. ...++..|++++.++.
T Consensus 45 ~~~~~~l~~~~g~-----~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~----Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~ 115 (401)
T PLN02409 45 KELLEDVKYIFKT-----KSGTPFIFPTTGTGAWESALTNTLSPGDK----VVSFRIGQFSLLWIDQMQRLNFDVDVVES 115 (401)
T ss_pred HHHHHHHHHHhCC-----CCCCEEEEeCCcHHHHHHHHHhcCCCCCE----EEEeCCCchhHHHHHHHHHcCCceEEEEC
Confidence 4555555566654 12346889999999999999999999998 99999988766 4667888999998886
Q ss_pred Ccc-cccc-------C----CCeeEEEEcCCCCCCcccch-HHHHHH--hhhcCcEEEEeecccCCCCCcCCCCCCccEE
Q 018172 117 DAN-TFDK-------N----NGAYIEVVNSPNNPDGTIRE-AVLAKV--NRSAEGKLIHDLAYYWPQYTPITGAADHDIM 181 (360)
Q Consensus 117 ~~~-~~~~-------~----~~~~~i~~~~p~NPtG~~~~-~~~~~~--~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~ 181 (360)
+.+ +++. + +++++|++++++||||..++ +.+.++ |+++|+++|+|++++.+..+......+.+++
T Consensus 116 ~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~ 195 (401)
T PLN02409 116 PWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVA 195 (401)
T ss_pred CCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEE
Confidence 642 2211 1 37899999999999999999 667777 8889999999999986555444456678899
Q ss_pred EeccccccCCCCceEEEEeecCHHHHHHHHHHHh------------------hccccCChHHHHHHHHHhcccCCCchhH
Q 018172 182 LFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIE------------------LGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 182 ~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
+.|.+|.++.|. ++||++. +++.++.+..... ....+++...+.++.++++.+.. ..
T Consensus 196 ~~s~~K~l~~P~-G~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~---~G 270 (401)
T PLN02409 196 LTGSQKALSLPT-GLGIVCA-SPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFE---EG 270 (401)
T ss_pred EEcCccccCcCC-CcceeEE-CHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHH---hh
Confidence 999999886433 6999998 7888877653210 11335666778888888886542 67
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHH-HHHHHhhCeeeeCCCCC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDC-EKLLRAERIMARGGRRF 319 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~l~~~gI~~~pg~~f 319 (360)
+++++++++++++++.+.|+.. ++.+..+.... ..+...++.+++. +.+ ..++.++||.+.+|..-
T Consensus 271 ~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~---------~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~ 340 (401)
T PLN02409 271 LENVIARHARLGEATRLAVEAW-GLKLCTKKPEW---------RSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNK 340 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhh---------cccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCc
Confidence 8899999999999999999887 45544332111 1111345555432 444 45567789999998632
Q ss_pred CCCCCeEEEEecC--ChHHHHHHHHHHHHHHhchh
Q 018172 320 GADAKYARVSMLS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 320 ~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
.....+|++.-. +++++.+++++|.+++....
T Consensus 341 -~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 341 -VAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred -ccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 136789999755 89999999999999997644
No 158
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.93 E-value=1.2e-23 Score=194.89 Aligned_cols=266 Identities=17% Similarity=0.104 Sum_probs=184.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH---HHHHhCCeeeeec
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA---ETDYLRSGLYKWD 115 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~---~~~~~g~~~~~~~ 115 (360)
.++++.++++++ ++ ++++++|+++++..++..++++||. |+++.|+|..+.. .....|++++.++
T Consensus 35 ~~l~~~~a~~~g-------~~-~~~~~~~gt~a~~~~~~~l~~~gd~----v~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 102 (338)
T cd06502 35 AKLEARAAELFG-------KE-AALFVPSGTAANQLALAAHTQPGGS----VICHETAHIYTDEAGAPEFLSGVKLLPVP 102 (338)
T ss_pred HHHHHHHHHHhC-------CC-eEEEecCchHHHHHHHHHhcCCCCe----EEEecCcceeeecCCcHHHHcCceEEeec
Confidence 899999999998 33 5777878889999999999999998 9999999987543 3455799999887
Q ss_pred CCcc-----cccc--C-------CCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC----CCcCC
Q 018172 116 GDAN-----TFDK--N-------NGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ----YTPIT 173 (360)
Q Consensus 116 ~~~~-----~~~~--~-------~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~----~~~~~ 173 (360)
.+.. .+.. + +++++|++++|||| |..++ +.+.++|+++|+++++|++|..+. ..+..
T Consensus 103 ~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~ 181 (338)
T cd06502 103 GENGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALK 181 (338)
T ss_pred CCCCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHH
Confidence 6432 2211 1 26899999999998 54444 346677888999999999985211 01111
Q ss_pred -CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhc--cccCChHHHHHHHHHhcccCCCchhHHHHHHHH
Q 018172 174 -GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELG--SIGVSKESQLRAAKILGIVSDDYPNFFEYGRRL 250 (360)
Q Consensus 174 -~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (360)
...+.++++.|+||.++++| |+++..++++++.+....... +.+.+.+.+.++.+.|+ .. .+ .+..++
T Consensus 182 ~~~~~~d~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~---~~--~~-~~~~~~ 252 (338)
T cd06502 182 TYKSGVDSVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALE---ND--LW-LRRLRH 252 (338)
T ss_pred HHHhcCCEEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhc---Cc--hH-HHHHHH
Confidence 12345577889999999887 554433889999988765432 33456667777766665 21 23 345567
Q ss_pred HHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-HH---HHHHH---HhhCeeeeCCCCCCCCC
Q 018172 251 MSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-ED---CEKLL---RAERIMARGGRRFGADA 323 (360)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~l---~~~gI~~~pg~~f~~~~ 323 (360)
+.++++++.+.|++++. .... +.++|+.+..+.. .. +.+.+ .++|+.+.+.. .
T Consensus 253 ~~~~~~~l~~~L~~~~~-~~~~--------------~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~~~-----~ 312 (338)
T cd06502 253 DHEMARRLAEALEELGG-LESE--------------VQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFYAWG-----E 312 (338)
T ss_pred HHHHHHHHHHHHHhcCC-Cccc--------------ccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEEecC-----C
Confidence 77778999999998854 2211 2334556655432 22 22222 25799987742 2
Q ss_pred CeEEEEecC--ChHHHHHHHHHHHH
Q 018172 324 KYARVSMLS--REEIFNIFLERLSA 346 (360)
Q Consensus 324 ~~~R~s~~~--~~e~~~~~~~~l~~ 346 (360)
+++|+++.. ++++++++++++++
T Consensus 313 ~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 313 GGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred CeEEEEeecCCCHHHHHHHHHHHhc
Confidence 789999854 89999999999865
No 159
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.93 E-value=1.4e-23 Score=197.19 Aligned_cols=276 Identities=16% Similarity=0.093 Sum_probs=199.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc------CCCCCCCceEEEeCCCCCCcHHHHHHhCCeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS------SPGGPEPISVVSAAPYYSQYPAETDYLRSGLY 112 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~------~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~ 112 (360)
.++|+.+++++|. +++++++++|+++++..++..+. ++||+ |++++++|.++...++..|++++
T Consensus 62 ~~~~~~la~~~g~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~----vl~~~~~h~~~~~~~~~~G~~~~ 131 (373)
T TIGR03812 62 EEVVGSLGNLLHL------PDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPN----IIVPESAHFSFEKAAEMLGLELR 131 (373)
T ss_pred HHHHHHHHHHhCC------CCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcE----EEECCcchHHHHHHHHHcCCeEE
Confidence 7888999999986 45578899999999888776653 35677 99999999999999999999999
Q ss_pred eecCCcc------cccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC---------cC-C
Q 018172 113 KWDGDAN------TFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT---------PI-T 173 (360)
Q Consensus 113 ~~~~~~~------~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~---------~~-~ 173 (360)
.++.+.+ .+.. +++++.+++.+|+||||...+ +.+.++|+++++++++|++|.....+ .+ .
T Consensus 132 ~v~~~~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~ 211 (373)
T TIGR03812 132 YAPLDEDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDF 211 (373)
T ss_pred EEeeCCCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccc
Confidence 8886532 1211 345655555568999999987 67888888899999999999743211 11 1
Q ss_pred CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhcc--------ccCChHHHHHHHHHhcccCCCchhHHH
Q 018172 174 GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGS--------IGVSKESQLRAAKILGIVSDDYPNFFE 245 (360)
Q Consensus 174 ~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~~~~~~ 245 (360)
...+.+.+..|.+| |++++.++|+++..++++++.+.....+.. .+.+.....++.++++.+.. ..++
T Consensus 212 ~~~~~d~~~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~---~g~~ 287 (373)
T TIGR03812 212 SLPGVQSITIDPHK-MGLSPIPAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGR---EGYR 287 (373)
T ss_pred cCCCCCEEEECccc-cCCCcCCceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCH---HHHH
Confidence 12244566778899 766778888766557888877642211111 12334555566666664432 6778
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCe
Q 018172 246 YGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKY 325 (360)
Q Consensus 246 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~ 325 (360)
+..+++.++++++.+.|++++...+.. +..+++.+..++...+.+.|.++||.++++. .+++
T Consensus 288 ~~~~~~~~~~~~l~~~L~~~g~~~~~~--------------~~~~~v~~~~~~~~~v~~~L~~~gi~v~~~~----~~~~ 349 (373)
T TIGR03812 288 KIVAECMENTRYLVEELKKIGFEPVIE--------------PVLNIVAFEVDDPEEVRKKLRDRGWYVSVTR----CPKA 349 (373)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEcC--------------CCceEEEEEeCCHHHHHHHHHHCCceeccCC----CCCE
Confidence 889999999999999999985433322 1233666776665678888889999998742 2568
Q ss_pred EEEEecC--ChHHHHHHHHHHHH
Q 018172 326 ARVSMLS--REEIFNIFLERLSA 346 (360)
Q Consensus 326 ~R~s~~~--~~e~~~~~~~~l~~ 346 (360)
+|+|+.. +++++++++++|++
T Consensus 350 iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 350 LRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred EEEEEECCCCHHHHHHHHHHHhh
Confidence 9999864 89999999999976
No 160
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.93 E-value=8.9e-24 Score=200.17 Aligned_cols=286 Identities=14% Similarity=0.099 Sum_probs=202.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc----CCCCCCCceEEEeCCCCCCcHHHH---HHhCCee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS----SPGGPEPISVVSAAPYYSQYPAET---DYLRSGL 111 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~----~~gd~~~~~vl~~~p~~~~~~~~~---~~~g~~~ 111 (360)
+++|+.++++++. ++++|++|+|+|++++.++..+. ++|++ |+++.++|+.+...+ +..|+++
T Consensus 50 ~~~r~~la~~~g~------~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~----Vi~~~~~h~s~~~~~~~~~~~g~~v 119 (402)
T TIGR02006 50 ENARNQVAELIGA------DSREIVFTSGATESNNLAIKGIAHFYKSKGNH----IITSKTEHKAVLDTCRYLEREGFEV 119 (402)
T ss_pred HHHHHHHHHHhCC------CCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCE----EEECCCccHHHHHHHHHHHhcCCEE
Confidence 7889999999986 55689999999999999887763 57887 999999999876654 3459999
Q ss_pred eeecCCccc------ccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEE
Q 018172 112 YKWDGDANT------FDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIML 182 (360)
Q Consensus 112 ~~~~~~~~~------~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~ 182 (360)
+.++.+.++ +.. +++++++++++++||||...+ +.+.++|+++|+++++|++++.+..+......+.++++
T Consensus 120 ~~v~~~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~ 199 (402)
T TIGR02006 120 TYLPPKSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMS 199 (402)
T ss_pred EEEccCCCCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEE
Confidence 988876432 111 457899999999999999998 67788888899999999999876554334456788999
Q ss_pred eccccccCCCCceEEEEeecCHHHHHHHHHHH-------hhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHH
Q 018172 183 FTLSKCTGHAGSRIGWALVKDTEVARKMTRFI-------ELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERW 255 (360)
Q Consensus 183 ~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 255 (360)
.|++|.+|++| +|+++.. ++....+.... .....+.+.....++.++++.+. ..++...+++++.+
T Consensus 200 ~s~~K~~gp~G--~G~l~~~-~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~----~~~~~~~~~~~~l~ 272 (402)
T TIGR02006 200 ISGHKIYGPKG--IGALYVR-RKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAK----EEMAQDTAHVLALR 272 (402)
T ss_pred EehhhhcCCCc--eEEEEEc-cCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHH----HhHHHHHHHHHHHH
Confidence 99999888667 8888773 32222222111 12233556666666667777553 45788889999999
Q ss_pred HHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCC--------------
Q 018172 256 NMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGA-------------- 321 (360)
Q Consensus 256 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~-------------- 321 (360)
+++.+.|+.++++.+..+.... . +....+.+...+.+.+...| ++|.++.|..+..
T Consensus 273 ~~l~~~l~~~~~v~~~~~~~~~-------~-p~~~~v~f~~~~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~ 342 (402)
T TIGR02006 273 DRLLNGIKSIEEVYLNGDLEHR-------V-PGNLNVSFNYVEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGI 342 (402)
T ss_pred HHHHHHHhcCCCEEEeCCcccc-------C-CCeEEEEEeCcCHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCC
Confidence 9999999988765443221100 0 00001222222234444444 4888887764421
Q ss_pred ----CCCeEEEEecC--ChHHHHHHHHHHHHHHhch
Q 018172 322 ----DAKYARVSMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 322 ----~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
..+++|+|+.. ++||+++++++|+++++..
T Consensus 343 ~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~ 378 (402)
T TIGR02006 343 NDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKL 378 (402)
T ss_pred ChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 13789999976 8999999999999998654
No 161
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.92 E-value=4.4e-23 Score=195.64 Aligned_cols=281 Identities=14% Similarity=0.102 Sum_probs=192.4
Q ss_pred HHHHHH----HHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH-----HHHhCC
Q 018172 39 PELAEA----INNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE-----TDYLRS 109 (360)
Q Consensus 39 ~~lr~~----la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~-----~~~~g~ 109 (360)
+++++. ++++++. +..+|++++ +++++..++.+++++||+ |+++.|+|..+... ++..|.
T Consensus 64 ~~l~~~~~~~~~~~~g~------~~~~v~~~s-gt~a~~~~l~~l~~~Gd~----Vl~~~~~~~~~~~~~~~~~~~~~g~ 132 (402)
T cd00378 64 DEIEDLAIERAKKLFGA------EYANVQPHS-GSQANLAVYFALLEPGDT----IMGLDLSHGGHLTHGSFTKVSASGK 132 (402)
T ss_pred HHHHHHHHHHHHHHhCC------CceeeecCC-cHHHHHHHHHHhcCCCCE----EEEecCccCccccccccccccccce
Confidence 666664 4456664 333455555 579999999999999998 99999999877544 666787
Q ss_pred eeeeecCCcc----cccc--------CCCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecccCCC-----CCcC
Q 018172 110 GLYKWDGDAN----TFDK--------NNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYWPQ-----YTPI 172 (360)
Q Consensus 110 ~~~~~~~~~~----~~~~--------~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay~~~~-----~~~~ 172 (360)
+++.++.+.+ .++. .++++++++++|+||+...+ +.+.++|+++|+++|+|++|..+. ....
T Consensus 133 ~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~~~~~~-~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~ 211 (402)
T cd00378 133 LFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYPRPIDF-KRFREIADEVGAYLLVDMAHVAGLVAGGVFPNP 211 (402)
T ss_pred eEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccCCCcCH-HHHHHHHHhcCCEEEEEccchhhhhhcccCCCc
Confidence 7666654322 2211 35789999999988754332 456777888999999999974211 1111
Q ss_pred CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHH-HHHHHhcccCCCchhHHHHHHHHH
Q 018172 173 TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQL-RAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 173 ~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
.. ..++++.|+||.+ +|.|+||+++.++++++.+.+.......+.+...+. ++..++..... .+.++.++++
T Consensus 212 ~~--~~dv~~~s~sK~l--~G~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~ 284 (402)
T cd00378 212 LP--GADVVTTTTHKTL--RGPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALE---PEFKAYAKQV 284 (402)
T ss_pred cc--CCcEEEeccccCC--CCCCceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhh---HHHHHHHHHH
Confidence 12 3468899999976 688999999954589999877654333343333332 32333432221 3667788889
Q ss_pred HHHHHHHHHHHHhcCCcccC-CCCCcccccccccCCCCCCcccccCCc----hHHHHHHHHhhCeeeeCCC----CCC-C
Q 018172 252 SERWNMLRQVIRQSGVFGLP-EYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLRAERIMARGGR----RFG-A 321 (360)
Q Consensus 252 ~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gI~~~pg~----~f~-~ 321 (360)
+++++++.+.|++++ +.+. .+.++ +++|+++++ ..++.++|+++||.+.++. .++ .
T Consensus 285 ~~~~~~l~~~L~~~g-~~~~~~~~~~-------------~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~ 350 (402)
T cd00378 285 VENAKALAEALKERG-FKVVSGGTDN-------------HLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPF 350 (402)
T ss_pred HHHHHHHHHHHHhCC-CeEeecCCCC-------------eEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCC
Confidence 999999999999884 4433 23333 378888863 2667788999999998643 221 1
Q ss_pred CCCeEEEEecC------ChHHHHHHHHHHHHHHhchh
Q 018172 322 DAKYARVSMLS------REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 322 ~~~~~R~s~~~------~~e~~~~~~~~l~~~~~~~~ 352 (360)
.+.++|+++.. ++++++++++.|++++.+..
T Consensus 351 ~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~~~ 387 (402)
T cd00378 351 VPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKDAE 387 (402)
T ss_pred CCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhccc
Confidence 35689998854 48999999999999887654
No 162
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.92 E-value=6.8e-24 Score=200.84 Aligned_cols=268 Identities=13% Similarity=0.072 Sum_probs=181.3
Q ss_pred CcEEEcCChHHHHHHHHHhhcCCCCC---CCceEEEeCCCCCCcHHHHHHhCCeee-------------eec-CCccccc
Q 018172 60 RHIVIGTGSTQLYQAALYALSSPGGP---EPISVVSAAPYYSQYPAETDYLRSGLY-------------KWD-GDANTFD 122 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~~gd~---~~~~vl~~~p~~~~~~~~~~~~g~~~~-------------~~~-~~~~~~~ 122 (360)
+++++|+|+++++..+++.+...++. +..+++..+++|..+.......+.... .++ .|.+.+.
T Consensus 97 ~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 176 (396)
T PRK02627 97 DKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALK 176 (396)
T ss_pred CEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHH
Confidence 58999999999999999977644321 112499999999888665554432211 111 0222222
Q ss_pred c--CCCeeEEEEcCCCCCCc-ccch----HHHHHHhhhcCcEEEEeecccCCCCCc--C-CCCCCccEEEeccccccCCC
Q 018172 123 K--NNGAYIEVVNSPNNPDG-TIRE----AVLAKVNRSAEGKLIHDLAYYWPQYTP--I-TGAADHDIMLFTLSKCTGHA 192 (360)
Q Consensus 123 ~--~~~~~~i~~~~p~NPtG-~~~~----~~~~~~~~~~~~~li~D~ay~~~~~~~--~-~~~~~~~i~~~S~sK~~~~~ 192 (360)
. .+++++|++..++||+| .+++ +.+.++|+++|+++|+||+|.+..... . ....+...-+.||||.++ +
T Consensus 177 ~~i~~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t~sK~~~-~ 255 (396)
T PRK02627 177 AAITDKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTLAKGLG-G 255 (396)
T ss_pred HhcCCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEEEEcchhh-C
Confidence 2 35789999999999999 4555 466788999999999999998432111 0 011111111457999999 9
Q ss_pred CceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCC
Q 018172 193 GSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPE 272 (360)
Q Consensus 193 G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 272 (360)
|+|+||+++ ++++++.+.......+++.+++.|.++.++++.+... .+.++.++.....++.+.+.+.+++.+..
T Consensus 256 G~rig~~~~-~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-- 330 (396)
T PRK02627 256 GVPIGAVLA-KEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEE--GLLENAAEVGEYLRAKLRELLEKYPGIKE-- 330 (396)
T ss_pred CcccEEEEE-cHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhc--cHHHHHHHHHHHHHHHHHHHHHhCCCeee--
Confidence 999999999 7888888876545567789999999999988865432 44555555544444444444444432111
Q ss_pred CCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec--CChHHHHHHHHHHHHHHh
Q 018172 273 YPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRFGADAKYARVSML--SREEIFNIFLERLSAIQG 349 (360)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~ 349 (360)
..+.+.|+|+.++.. ..+.+.|.++||.+.|+. .+++|++++ .+++++++++++|.++++
T Consensus 331 ------------~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~-----~~~lRi~~~~~~~~~~i~~~~~~l~~~l~ 393 (396)
T PRK02627 331 ------------VRGLGLMIGIELDRPAAEIVKKALEKGLLINVTG-----DNVLRLLPPLIISKEEIDEAVDRLEEVLK 393 (396)
T ss_pred ------------eccCcEEEEEEecCcHHHHHHHHHHCCeEEeecC-----CCEEEEECCcccCHHHHHHHHHHHHHHHH
Confidence 123445778877433 556666667799999853 468999864 499999999999999886
Q ss_pred c
Q 018172 350 G 350 (360)
Q Consensus 350 ~ 350 (360)
+
T Consensus 394 ~ 394 (396)
T PRK02627 394 E 394 (396)
T ss_pred h
Confidence 4
No 163
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.92 E-value=3.9e-23 Score=193.96 Aligned_cols=279 Identities=15% Similarity=0.084 Sum_probs=203.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHHhCCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDYLRSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~ 114 (360)
.++++.+++++|. ++.++++++|+++++..++..+.+ ++++ |+++++.|..+...++..|++++.+
T Consensus 62 ~~~~~~la~~~g~------~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~----vl~~~~~h~s~~~~~~~~g~~~~~v 131 (371)
T PRK13520 62 EEAVEMLGELLHL------PDAYGYITSGGTEANIQAVRAARNLAKAEKPN----IVVPESAHFSFDKAADMLGVELRRA 131 (371)
T ss_pred HHHHHHHHHHhCC------CCCCeEEecCcHHHHHHHHHHHHhhccCCCce----EEecCcchHHHHHHHHHcCceEEEe
Confidence 5788888888885 445789999999999888877754 3566 9999999999999999999999988
Q ss_pred cCCcc------cccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCc------CC-CCCCc
Q 018172 115 DGDAN------TFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTP------IT-GAADH 178 (360)
Q Consensus 115 ~~~~~------~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~------~~-~~~~~ 178 (360)
+.+.+ .+.. ++++++|++++++||||...+ +++.++|+++|+++++|++|.....+. .. ...+.
T Consensus 132 ~~~~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~v 211 (371)
T PRK13520 132 PLDDDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGV 211 (371)
T ss_pred cCCCCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCC
Confidence 86533 2222 356778888889999999998 778888888999999999998432110 11 12345
Q ss_pred cEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhc--------cccCChHHHHHHHHHhcccCCCchhHHHHHHHH
Q 018172 179 DIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELG--------SIGVSKESQLRAAKILGIVSDDYPNFFEYGRRL 250 (360)
Q Consensus 179 ~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (360)
+.+..|.+| |+.+|.++|+++..++++++.+.....+. ..+.+.....++.++++.+.. ..+++.+++
T Consensus 212 d~~~~s~~K-~~~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~---~g~~~~~~~ 287 (371)
T PRK13520 212 DSITIDPHK-MGLAPIPAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGR---EGYRKVVER 287 (371)
T ss_pred ceEEECCcc-ccCccCCceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcH---hHHHHHHHH
Confidence 667778899 55578899988875777777764221111 112234556666666765432 556788899
Q ss_pred HHHHHHHHHHHHHhcCCcc-cCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEEE
Q 018172 251 MSERWNMLRQVIRQSGVFG-LPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYARVS 329 (360)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s 329 (360)
..++++++.+.|+++ ++. +..+. .+++.+++++.+.+.+.|.++||.+.++. .++++|+|
T Consensus 288 ~~~~~~~l~~~L~~~-g~~~~~~~~--------------~~~v~~~~~~~~~v~~~L~~~gi~v~~~~----~~~~iRis 348 (371)
T PRK13520 288 CMENTRWLAEELKER-GFEPVIEPV--------------LNIVAFDDPNPDEVREKLRERGWRVSVTR----CPEALRIV 348 (371)
T ss_pred HHHHHHHHHHHHHhC-CCEEecCCC--------------ceEEEEecCCHHHHHHHHHHCCceeccCC----CCCEEEEE
Confidence 999999999999987 444 32221 23556666655788888888999988743 24689999
Q ss_pred ecC--ChHHHHHHHHHHHHHHhc
Q 018172 330 MLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 330 ~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
+.. ++|++++++++|++++++
T Consensus 349 ~~~~~t~edi~~~~~~l~~~~~~ 371 (371)
T PRK13520 349 CMPHVTREHIENFLEDLKEVKKR 371 (371)
T ss_pred EECCCCHHHHHHHHHHHHHHhhC
Confidence 864 899999999999988764
No 164
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.92 E-value=3.8e-23 Score=194.58 Aligned_cols=289 Identities=17% Similarity=0.175 Sum_probs=188.7
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH----HHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET----DYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~----~~~g~~~~~ 113 (360)
..+|++.+++++|. +. .+++++++.++..++..++++||+ |+++.|.|..+...+ ...|++++.
T Consensus 67 ~~~Le~~lA~l~G~------~~--~~~~~sG~~Ai~~~l~~~l~~Gd~----Vl~~~~~y~~~~~~~~~~~~~~G~~v~~ 134 (398)
T PRK07504 67 VDMFEKRMCALEGA------ED--ARATASGMAAVTAAILCQVKAGDH----VVAARALFGSCRYVVETLLPRYGIESTL 134 (398)
T ss_pred HHHHHHHHHHHhCC------Ce--eeEecCHHHHHHHHHHHHhCCCCE----EEEcCCchhHHHHHHHHHHhhcCeEEEE
Confidence 48999999999985 32 344667788888888888999998 999999999876554 456888888
Q ss_pred ec-CCcccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WD-GDANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~-~~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++ .|.+.+.. +++|++|++++|+||||.+.+ +.+.++|+++|+++|+|++|..+... .+...+.+++++|+||.+
T Consensus 135 vd~~d~e~l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~-~~~~~gaDivv~S~sK~l 213 (398)
T PRK07504 135 VDGLDLDNWEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQ-KPLELGAHIVVYSATKHI 213 (398)
T ss_pred ECCCCHHHHHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccC-CchhhCCCEEEeeccccc
Confidence 86 33344433 578999999999999999998 67788888899999999999854322 122446789999999999
Q ss_pred CCCCceEE-EEeecCHHHHH-HHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018172 190 GHAGSRIG-WALVKDTEVAR-KMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGV 267 (360)
Q Consensus 190 ~~~G~r~G-~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 267 (360)
+.+|+++| ++++ +++.+. .++......+...+++....+ +..+ +.+....++..++...+.+.|++++.
T Consensus 214 ~g~g~~~GG~vv~-~~~~i~~~~~~~~~~~g~~~s~~~A~~~---l~~L-----~tl~~R~~~~~~na~~la~~L~~~p~ 284 (398)
T PRK07504 214 DGQGRCLGGVVLS-DKAWIEEHLQDYFRHTGPSLSPFNAWTL---LKGL-----ETLPVRVRQQTESAAAIADFLAGHPK 284 (398)
T ss_pred cCCccceEEEEEe-CcHHHHHHHHHHHHHhCCCCCHHHHHHH---Hhcc-----chHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 88999996 5555 555554 455443333444444444444 4432 33444555556888888999999877
Q ss_pred cccCCCCCcc----cccccccCCCCCCcccccCCch-HHHHHHHHhhCeeee---CCC----------------------
Q 018172 268 FGLPEYPLEY----CNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMAR---GGR---------------------- 317 (360)
Q Consensus 268 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~---pg~---------------------- 317 (360)
+..+.++|.. +........+.++.+.++++++ +.+.+.+..-.+.-. -|.
T Consensus 285 v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~ 364 (398)
T PRK07504 285 VARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNALKIVRISNNLGDAKSLITHPATTTHKNLSPEARA 364 (398)
T ss_pred ccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhCCcceecccCCCCCeeeeCCCCCCcccCCHHHHH
Confidence 6644444321 0111111234466788888644 444444444343321 111
Q ss_pred CCCCCCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 318 RFGADAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 318 ~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
..|..++.+|||++.+ +.+.+++.|.+.+++
T Consensus 365 ~~gi~~~liR~svGlE--~~~dl~~dl~~al~~ 395 (398)
T PRK07504 365 ELGISEGFLRLSAGLE--DTDDLIEDLAAALKK 395 (398)
T ss_pred hcCCCCCeEEEEeccC--CHHHHHHHHHHHHHh
Confidence 1122356899999762 234455555555543
No 165
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.92 E-value=1.2e-23 Score=197.88 Aligned_cols=271 Identities=16% Similarity=0.120 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc---C----CCCCCCceEEEeCCCCCCcHHHHHHhCCee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS---S----PGGPEPISVVSAAPYYSQYPAETDYLRSGL 111 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~---~----~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~ 111 (360)
.+|++.++++++. +++++++|+++++..++..+. . ++++ |++++|+|..+...+...+...
T Consensus 72 ~~l~~~la~~~g~--------~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~----vi~~~~~yh~~~~~~~~~~~~~ 139 (379)
T TIGR00707 72 EELAEKLVEHSGA--------DRVFFCNSGAEANEAALKLARKYTGDKGKEKKK----IIAFENSFHGRTMGALSATGQP 139 (379)
T ss_pred HHHHHHHHhhCCC--------CEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCe----EEEECCCcCCccHHHHHhcCCh
Confidence 7777888887763 389999999999999888662 2 2566 9999999998877766555432
Q ss_pred ee-------------ecC-Ccccccc--CCCeeEEEEcCCCCCCccc-ch----HHHHHHhhhcCcEEEEeecccCCCCC
Q 018172 112 YK-------------WDG-DANTFDK--NNGAYIEVVNSPNNPDGTI-RE----AVLAKVNRSAEGKLIHDLAYYWPQYT 170 (360)
Q Consensus 112 ~~-------------~~~-~~~~~~~--~~~~~~i~~~~p~NPtG~~-~~----~~~~~~~~~~~~~li~D~ay~~~~~~ 170 (360)
.. ++. |.+.+.. ++++++|+++.++||+|.. ++ +.+.++|+++++++|+||+|.+....
T Consensus 140 ~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~ 219 (379)
T TIGR00707 140 KYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRT 219 (379)
T ss_pred hhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcc
Confidence 11 110 2222222 3468899987666778864 44 45677888899999999999842211
Q ss_pred ----c--CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHH
Q 018172 171 ----P--ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFF 244 (360)
Q Consensus 171 ----~--~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 244 (360)
+ ..+... + +.+|||.++ +|+|+||+++ ++++++.+........++.+++.|.++.++|+.+..
T Consensus 220 g~~~~~~~~~~~~-d--~~t~sK~~~-~G~riG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~------ 288 (379)
T TIGR00707 220 GKFFAYEHYGIEP-D--IITLAKGLG-GGVPIGATLA-KEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEK------ 288 (379)
T ss_pred chhhhHHhcCCCC-C--EEEEccccc-CCcccEEEEE-cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh------
Confidence 1 111122 2 237899999 9999999998 789999887654445677899999999988875422
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCCCCCC
Q 018172 245 EYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRFGADA 323 (360)
Q Consensus 245 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~~~~ 323 (360)
.+.++.++++++.+.+.|+++. ...... ...+.++|+|+.+++. ..+.+.|.++||.+.|+. .
T Consensus 289 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~~----------~~~~~g~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----~ 352 (379)
T TIGR00707 289 ERLLENVKEKGDYFKERLEELG-KNYPNK----------EVRGKGLMLGIELEAPCKDIVKKALEKGLLVNCAG-----P 352 (379)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH-hhCCCC----------ccccCceEEEEEecCcHHHHHHHHHHCCcEEeeCC-----C
Confidence 2355666777777777776552 111000 1123455788887644 677788899999999842 4
Q ss_pred CeEEEEec--CChHHHHHHHHHHHHHH
Q 018172 324 KYARVSML--SREEIFNIFLERLSAIQ 348 (360)
Q Consensus 324 ~~~R~s~~--~~~e~~~~~~~~l~~~~ 348 (360)
+++|++++ .++|++++++++|++++
T Consensus 353 ~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 353 KVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 68999974 49999999999998764
No 166
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.92 E-value=5.5e-23 Score=193.80 Aligned_cols=252 Identities=15% Similarity=0.160 Sum_probs=172.7
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH----HHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA----ETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~----~~~~~g~~~~~ 113 (360)
..+|++++++++|. ++ .++++++++++.+++..++++||+ |+++.|.|..... .+...|++++.
T Consensus 67 ~~~le~~lA~l~g~-------~~-~i~~~sG~~Al~~~l~~ll~~Gd~----Viv~~~~y~~t~~~~~~~~~~~G~~v~~ 134 (403)
T PRK07503 67 LALLEQRMASLEGG-------EA-AVALASGMGAITATLWTLLRPGDE----VIVDQTLYGCTFAFLHHGLGEFGVTVRH 134 (403)
T ss_pred HHHHHHHHHHHhCC-------Cc-EEEEcCHHHHHHHHHHHHcCCCCE----EEEccCccchHHHHHHHHHhhCCEEEEE
Confidence 48999999999985 33 455666788999999999999998 9999999976543 34567999998
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+ .+.+.. ++++++|++++|+||||.+.+ +.+.++|+++|+++|+|++|..+... .+-..+.+++++|+||.+
T Consensus 135 vd~~d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~-~~l~~g~Di~v~S~tK~l 213 (403)
T PRK07503 135 VDLTDPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQ-RPLELGADLVVHSATKYL 213 (403)
T ss_pred eCCCCHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-CchhhCCCEEEccccccc
Confidence 8764 344433 468999999999999999988 67788888899999999999854221 112346689999999999
Q ss_pred CCCC-ceEEEEeecCHHHHHHHHHH--HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 018172 190 GHAG-SRIGWALVKDTEVARKMTRF--IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSG 266 (360)
Q Consensus 190 ~~~G-~r~G~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 266 (360)
+.+| .+.|+++. ++++++.++.. +...+.+.+++.+..+...+ +.+....++..++...+.+.|.+++
T Consensus 214 ~g~gd~~gG~v~~-~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L--------~tl~~r~~~~~~na~~~a~~L~~~p 284 (403)
T PRK07503 214 GGHGDITAGLVVG-GKALADRIRLEGLKDMTGAVMSPFDAFLLMRGL--------KTLALRMDRHCASAQAVAEWLARHP 284 (403)
T ss_pred cCCCceeEEEEEc-CHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCc--------chHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9665 77888886 88888888743 43344556666665544333 2333344444577788888999988
Q ss_pred CcccCCCCCcc----cccccccCCCCCCcccccCCch-HHHHHHHHhhCe
Q 018172 267 VFGLPEYPLEY----CNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERI 311 (360)
Q Consensus 267 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI 311 (360)
.+..+.+++.. +..........+..+.+.++++ +...+.+.+-.+
T Consensus 285 ~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~l~l 334 (403)
T PRK07503 285 AVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGIAAGRRFMNALQL 334 (403)
T ss_pred CccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCHHHHHHHHHhCCc
Confidence 66654443321 1111111123455667777544 334444433333
No 167
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.92 E-value=5.2e-23 Score=195.04 Aligned_cols=276 Identities=16% Similarity=0.158 Sum_probs=191.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC--CCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS--PGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG 116 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~--~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 116 (360)
.+|++.++++++. ++.+++++ +++++..++..+.. +++. |+.....|......+...|.++..++.
T Consensus 93 ~~Le~~la~~~g~-------~~~l~~~s-G~~an~~ai~~l~~~~~~~~----v~~~~~~h~s~~~~~~~~g~~~~~~~~ 160 (402)
T TIGR01821 93 VELEAELADLHGK-------ESALVFTS-GYVANDATLATLAKIIPGCV----IFSDELNHASMIEGIRHSGAEKFIFRH 160 (402)
T ss_pred HHHHHHHHHHhCC-------CeEEEECc-hHHHHHHHHHHhhCCCCCCE----EEEcchHhHHHHHHHHHcCCeEEEECC
Confidence 6778888887763 33455555 58888888888764 5554 555556777777777778888776653
Q ss_pred -Ccccccc-----C-CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC----CcCC---CC-CCccE
Q 018172 117 -DANTFDK-----N-NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY----TPIT---GA-ADHDI 180 (360)
Q Consensus 117 -~~~~~~~-----~-~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~----~~~~---~~-~~~~i 180 (360)
|.+.++. + .++++|++++|+||||.+.+ +.+.++|+++++++|+||+|..+.+ .... +. .+.++
T Consensus 161 ~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~di 240 (402)
T TIGR01821 161 NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDI 240 (402)
T ss_pred CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeE
Confidence 2222211 2 35789999999999999988 7788889999999999999983221 1111 11 23478
Q ss_pred EEeccccccCCCCceEEEEeecCHHHHHHHHHHHhh--ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIEL--GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
+++||||+||++| ||+++ ++++++.+...... .+.+.++..+.++.++++.+.. . +..++++.++++++
T Consensus 241 v~~t~sKa~g~~G---G~i~~-~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~----~-~~~~~~~~~~~~~l 311 (402)
T TIGR01821 241 IEGTLAKAFGVVG---GYIAA-SRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKE----S-QDLRRAHQENVKRL 311 (402)
T ss_pred EEEechhhhccCC---ceeec-CHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhc----C-HHHHHHHHHHHHHH
Confidence 8999999999888 99988 88899988765432 2345777788888888875432 1 45566677888999
Q ss_pred HHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHH-HhhCeeeeCCCCCCC--CCCeEEEEecC
Q 018172 259 RQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLL-RAERIMARGGRRFGA--DAKYARVSMLS 332 (360)
Q Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l-~~~gI~~~pg~~f~~--~~~~~R~s~~~ 332 (360)
.+.|++++ +.+..+. ++++.+.+++. ..+.+.| +++||.+++...... ..+++|+++..
T Consensus 312 ~~~L~~~g-~~~~~~~--------------~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~ 376 (402)
T TIGR01821 312 KNLLEALG-IPVIPNP--------------SHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTP 376 (402)
T ss_pred HHHHHHcC-CCcCCCC--------------CCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCC
Confidence 99998874 3333222 23445555432 4455555 566999988543322 24689999854
Q ss_pred --ChHHHHHHHHHHHHHHhc
Q 018172 333 --REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 333 --~~e~~~~~~~~l~~~~~~ 350 (360)
++|++++++++|++++++
T Consensus 377 ~~t~edi~~~~~~l~~~~~~ 396 (402)
T TIGR01821 377 AHTDKMIDDLVEALLLVWDR 396 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999865
No 168
>PRK14012 cysteine desulfurase; Provisional
Probab=99.92 E-value=2.1e-23 Score=197.86 Aligned_cols=286 Identities=15% Similarity=0.085 Sum_probs=198.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc----CCCCCCCceEEEeCCCCCCcHHHHHH---hCCee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS----SPGGPEPISVVSAAPYYSQYPAETDY---LRSGL 111 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~----~~gd~~~~~vl~~~p~~~~~~~~~~~---~g~~~ 111 (360)
+++|+.++++++. ++++|++|+|+|+++++++.++. ++||+ |+++.++|+.....+.. .|+++
T Consensus 52 ~~~r~~ia~~~g~------~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~----Vi~~~~~~~s~~~~~~~~~~~g~~~ 121 (404)
T PRK14012 52 DIARNQIADLIGA------DPREIVFTSGATESDNLAIKGAAHFYQKKGKH----IITSKTEHKAVLDTCRQLEREGFEV 121 (404)
T ss_pred HHHHHHHHHHcCc------CcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCE----EEEecCccHHHHHHHHHHHhCCCEE
Confidence 7889999999986 55689999999999999887763 67888 99999999888665544 49999
Q ss_pred eeecCCcccc-cc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEE
Q 018172 112 YKWDGDANTF-DK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIML 182 (360)
Q Consensus 112 ~~~~~~~~~~-~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~ 182 (360)
+.++.+.++. +. +++++++++++++||||.+++ +.+.++|+++|+++++|++++.+..+......+.++++
T Consensus 122 ~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~ 201 (404)
T PRK14012 122 TYLDPQSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMS 201 (404)
T ss_pred EEEccCCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEE
Confidence 9888764432 21 468899999999999999998 77788888899999999999876554333455678999
Q ss_pred eccccccCCCCceEEEEeecCHHHHHHHHHH-H------hhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHH
Q 018172 183 FTLSKCTGHAGSRIGWALVKDTEVARKMTRF-I------ELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERW 255 (360)
Q Consensus 183 ~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~-~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 255 (360)
+|++|.+| |+ ++|+++..+. ....+... . .....+.+.....+..+++..+. ..+++..++.++.+
T Consensus 202 ~s~~K~~g-p~-g~G~l~~~~~-~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~----~~~~~~~~~~~~l~ 274 (404)
T PRK14012 202 FSAHKIYG-PK-GIGALYVRRK-PRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAK----EEMATENERIRALR 274 (404)
T ss_pred EehhhccC-CC-ceEEEEEecC-CCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHH----hhHHHHHHHHHHHH
Confidence 99999888 43 5888887433 22222211 0 01122233444444445555332 34566778888889
Q ss_pred HHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCC--------------
Q 018172 256 NMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGA-------------- 321 (360)
Q Consensus 256 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~-------------- 321 (360)
+++.+.|++++++.+..+... ......++++...+.+.+...|+ ++.+..|..|..
T Consensus 275 ~~l~~~L~~~~~i~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~ 344 (404)
T PRK14012 275 DRLWNGIKDIEEVYLNGDLEQ--------RVPGNLNVSFNYVEGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGL 344 (404)
T ss_pred HHHHHHHhcCCCEEEeCCccc--------cCCCEEEEEEeCcCHHHHHHhCC--CeEEEchhhhCCCCCCCCHHHHHcCC
Confidence 999999988765554321100 00111235555544445555553 677776654421
Q ss_pred ----CCCeEEEEecC--ChHHHHHHHHHHHHHHhch
Q 018172 322 ----DAKYARVSMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 322 ----~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
..+.+|+|+.. +++|+++++++|+++++..
T Consensus 345 ~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 345 NDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKL 380 (404)
T ss_pred ChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 13689999976 8999999999999988654
No 169
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.92 E-value=6.3e-23 Score=193.27 Aligned_cols=280 Identities=11% Similarity=0.015 Sum_probs=197.6
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC-
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG- 116 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~- 116 (360)
..++|+.+++++|. + ++++++|+++++..++..++++||+ |+++.++|.+....++..|++++.++.
T Consensus 65 ~~~l~~~lA~~~g~-------~-~~~~~~g~t~a~~~al~~l~~~gd~----Vlv~~~~h~s~~~~~~~~G~~~~~v~~~ 132 (387)
T PRK09331 65 IADFHEDLAEFLGM-------D-EARVTHGAREGKFAVMHSLCKKGDY----VVLDGLAHYTSYVAAERAGLNVREVPKT 132 (387)
T ss_pred HHHHHHHHHHHhCC-------C-cEEEeCCHHHHHHHHHHHhcCCCCE----EEECCCchHHHHHHHHHcCCEEEEEeCc
Confidence 49999999999995 3 5888999999999999999999998 999999999888888889999999887
Q ss_pred -Cccc-ccc---------C-----CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCcc
Q 018172 117 -DANT-FDK---------N-----NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHD 179 (360)
Q Consensus 117 -~~~~-~~~---------~-----~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~ 179 (360)
+.++ ++. . +++++|++++|+||||...+ +.+.++|+++|+++++|++|+.+..+......+.+
T Consensus 133 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~g~D 212 (387)
T PRK09331 133 GYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKLGAD 212 (387)
T ss_pred cCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHcCCC
Confidence 3221 111 1 36899999999999999988 67888888899999999999865544333455778
Q ss_pred EEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhh--------ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 180 IMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIEL--------GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 180 i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
+++.|++|+++ .+.++||+++ ++++++.+.+.... .+.+.+.....++.+.++.+. +..+ ..++.
T Consensus 213 ~~~~s~~K~l~-~~~~~G~l~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~----~~~~-~~~~~ 285 (387)
T PRK09331 213 FIVGSGHKSMA-ASAPSGVLAT-TEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVV----ERVK-RWDEE 285 (387)
T ss_pred EEEeeCccccc-CCCCEEEEEE-CHHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHH----HHHH-HHHHH
Confidence 99999999998 5568999998 78888887554211 111122222233333343211 2232 33445
Q ss_pred HHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-----------chHHHHHHHHhhCeeeeCCCCCC
Q 018172 252 SERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-----------EDEDCEKLLRAERIMARGGRRFG 320 (360)
Q Consensus 252 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~gI~~~pg~~f~ 320 (360)
.++.+++.+.|++++++.+..... +.++++.++.+ ....+.+.|+++||...+. +
T Consensus 286 ~~~~~~l~~~L~~l~g~~~~~~~~-----------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~---~ 351 (387)
T PRK09331 286 VKKARWFVDELEKIEGFKQLGEKP-----------RNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIKP---G 351 (387)
T ss_pred HHHHHHHHHHHhcCCCEEEeccCc-----------CcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEcc---C
Confidence 667778899999996666542111 11122222222 1145778888899984331 1
Q ss_pred CCCCeEEEEecC-ChHHHHHHHHHHHHHHhch
Q 018172 321 ADAKYARVSMLS-REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 321 ~~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~ 351 (360)
....+|+.... +++++++++++|++++.+.
T Consensus 352 -~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 352 -ATKEFKLSTYGLTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred -CceEEEEEeccCCHHHHHHHHHHHHHHHHhc
Confidence 24467776534 9999999999999997754
No 170
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.92 E-value=2.4e-23 Score=196.53 Aligned_cols=269 Identities=14% Similarity=0.106 Sum_probs=178.5
Q ss_pred CCcEEEcCChHHHHHHHHHhh----cCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeee-------------ec-CCccc
Q 018172 59 GRHIVIGTGSTQLYQAALYAL----SSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYK-------------WD-GDANT 120 (360)
Q Consensus 59 ~~~i~~t~G~t~~l~~~~~~l----~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~-------------~~-~~~~~ 120 (360)
.+++++++|+++++..+++.+ .++|++.+.+|+..++.|+.+...+...+..... ++ .|.+.
T Consensus 88 ~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 167 (389)
T PRK01278 88 ADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEA 167 (389)
T ss_pred CCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHH
Confidence 458999999999999998877 4567643345999999999987776655433211 11 12222
Q ss_pred ccc--CCCeeEEEEcCCCCCCc-ccch----HHHHHHhhhcCcEEEEeecccCCCCCc--CC-CCCCccEEEeccccccC
Q 018172 121 FDK--NNGAYIEVVNSPNNPDG-TIRE----AVLAKVNRSAEGKLIHDLAYYWPQYTP--IT-GAADHDIMLFTLSKCTG 190 (360)
Q Consensus 121 ~~~--~~~~~~i~~~~p~NPtG-~~~~----~~~~~~~~~~~~~li~D~ay~~~~~~~--~~-~~~~~~i~~~S~sK~~~ 190 (360)
++. ++++++|+++.++||+| ..++ +.+.++|+++|+++|+||+|.+..... .. ...+...-+.|+||.++
T Consensus 168 l~~~l~~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~ 247 (389)
T PRK01278 168 LKAAITPNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAKGIG 247 (389)
T ss_pred HHHhhCCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEEEehhcc
Confidence 222 34789999998888999 4555 466788999999999999998432111 11 11111112468999999
Q ss_pred CCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCC-chhHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 018172 191 HAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDD-YPNFFEYGRRLMSERWNMLRQVIRQSGVFG 269 (360)
Q Consensus 191 ~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 269 (360)
+|+|+||+++ ++++++.+.......+++.|++.|.++.++++.+.+. +.+++.+..+.++++++.+ ...++.+
T Consensus 248 -~G~~ig~~~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~~- 321 (389)
T PRK01278 248 -GGFPLGACLA-TEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGL---VDRFPDV- 321 (389)
T ss_pred -CCcceEEEEE-cHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH---HhhCCCc-
Confidence 9999999998 7888888876666677789999999998888765332 1122333333333333322 2222211
Q ss_pred cCCCCCcccccccccCCCCCCcccccCCc-hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec--CChHHHHHHHHHHHH
Q 018172 270 LPEYPLEYCNFTGKFTNSHPGFAWLESKE-DEDCEKLLRAERIMARGGRRFGADAKYARVSML--SREEIFNIFLERLSA 346 (360)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~ 346 (360)
+. .+.+.+.++|+.+.. ...+.+.|.++||.+.|+. .+++||++. .+++++++++++|.+
T Consensus 322 ~~------------~v~g~G~~~~i~~~~~~~~~~~~l~~~GV~~~p~~-----~~~lR~~p~~~~~~~~i~~~l~~l~~ 384 (389)
T PRK01278 322 IE------------EVRGKGLLLGLKCVVPNRDLVQALRDEGLLTVGAG-----DNVVRLLPPLIITEEEIDEALERLER 384 (389)
T ss_pred ee------------eEecccEEEEEEEecCHHHHHHHHHHCCeEEeecC-----CCEEEEeCCcccCHHHHHHHHHHHHH
Confidence 00 112333466766643 3556666667799999863 579999864 489999999999999
Q ss_pred HHhc
Q 018172 347 IQGG 350 (360)
Q Consensus 347 ~~~~ 350 (360)
++.+
T Consensus 385 ~l~~ 388 (389)
T PRK01278 385 AAES 388 (389)
T ss_pred HHHh
Confidence 8753
No 171
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=1.1e-22 Score=189.95 Aligned_cols=252 Identities=13% Similarity=0.095 Sum_probs=179.6
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH----HHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET----DYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~----~~~g~~~~~ 113 (360)
...|+++++++.+. +++++|+|+++++..++.+++++||+ |+++.|+|......+ ...|.+++.
T Consensus 55 ~~~Le~~lA~leg~--------e~ivvt~gg~~Ai~~~l~all~~Gd~----Il~~~~~y~~~~~~~~~~~~~~gi~v~~ 122 (388)
T PRK08861 55 RGLLEQTLSELESG--------KGAVVTNCGTSALNLWVSALLGPDDL----IVAPHDCYGGTYRLFNTRANKGDFKVQF 122 (388)
T ss_pred HHHHHHHHHHHhCC--------CeEEEECCHHHHHHHHHHHHcCCCCE----EEEcCCchHHHHHHHHHHHhcCCeEEEE
Confidence 48999999999983 48999999999999999999999998 999999999755433 234678777
Q ss_pred ecC-Ccccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDG-DANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~-~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++. |.+.+.. ++++++|++++||||||.+++ +.+.++|+++|+++|+|++|..+... .+-..+.+++++|++|.+
T Consensus 123 vd~~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~-~pl~~GaDivv~S~tK~l 201 (388)
T PRK08861 123 VDQSDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQ-KPLELGADFVIHSTTKYI 201 (388)
T ss_pred ECCCCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccC-CCcccCCCEEEeecceec
Confidence 753 3344433 468999999999999999999 67778888899999999999864321 122456789999999988
Q ss_pred CC-CCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 190 GH-AGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 190 ~~-~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+- .+...|++++.++++.+.++..+...+...++.....+...++ . +.-..++..++...+.+.|+.+|.+
T Consensus 202 ~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~-------T-l~lR~~~~~~~a~~~a~~L~~~p~v 273 (388)
T PRK08861 202 NGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIR-------T-LGARMRVHEESAQQILAYLQTQSLV 273 (388)
T ss_pred cCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcCC-------C-HHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 63 4567899888567788888877776677777877766655444 2 3333344466667888899999876
Q ss_pred ccCCCCCcc----cccccccCCCCCCcccccCCch-HHHHHHHHhhC
Q 018172 269 GLPEYPLEY----CNFTGKFTNSHPGFAWLESKED-EDCEKLLRAER 310 (360)
Q Consensus 269 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~g 310 (360)
..+.+++.. +..+.....+.+..+.+.++++ +.+.+.+..-.
T Consensus 274 ~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l~ 320 (388)
T PRK08861 274 GTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKALA 320 (388)
T ss_pred eEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcCC
Confidence 655444421 1111112234455677888643 44444443333
No 172
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.92 E-value=6.5e-23 Score=191.77 Aligned_cols=288 Identities=16% Similarity=0.108 Sum_probs=198.6
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH----HHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE----TDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~----~~~~g~~~~~ 113 (360)
..+|++.++++++. + +.++++++++++..++..++++||+ |+++.+.|...... +...|+++..
T Consensus 42 ~~~le~~la~l~g~-------~-~a~~~~sG~~Ai~~~l~~l~~~gd~----Vl~~~~~y~~~~~~~~~~~~~~g~~~~~ 109 (369)
T cd00614 42 VDALEKKLAALEGG-------E-AALAFSSGMAAISTVLLALLKAGDH----VVASDDLYGGTYRLFERLLPKLGIEVTF 109 (369)
T ss_pred HHHHHHHHHHHHCC-------C-CEEEEcCHHHHHHHHHHHHcCCCCE----EEECCCCcchHHHHHHHHHhhcCeEEEE
Confidence 48999999999984 3 4666777789999999999999998 99999999987654 4457888888
Q ss_pred ecCCc-ccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGDA-NTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~~-~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+. +.+.. ++++++|++.+|+||+|.+.+ +.+.++|+++|+++|+|++|..+... .+-..+.++++.|+||.+
T Consensus 110 v~~~d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~-~~~~~g~Divv~S~tK~l 188 (369)
T cd00614 110 VDPDDPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQ-RPLELGADIVVHSATKYI 188 (369)
T ss_pred eCCCCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcC-ChhhhCCcEEEeccceec
Confidence 87652 33332 457899999999999999998 77888889899999999999864331 112346789999999999
Q ss_pred CCCC-ceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 190 GHAG-SRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 190 ~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+.+| .+.||++++++++++.++..+...+.+.++..+.++...++ .+....++..++.+.+.+.|++++.+
T Consensus 189 ~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~--------tl~~r~~~~~~na~~la~~L~~~~~v 260 (369)
T cd00614 189 GGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLK--------TLPLRMERHSENALKVAEFLEKHPKV 260 (369)
T ss_pred cCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCC--------CHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 8655 78999998444888988877665566666666555433332 23445666788888999999998765
Q ss_pred ccCCCCCcc----cccccccCCCCCCcccccCC-chHHHHHHHHhhCeee---e----------CCC------------C
Q 018172 269 GLPEYPLEY----CNFTGKFTNSHPGFAWLESK-EDEDCEKLLRAERIMA---R----------GGR------------R 318 (360)
Q Consensus 269 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gI~~---~----------pg~------------~ 318 (360)
..+.+++.. +........+.+..+.+.++ +.+.+.+.+.+-.+.. . |.. .
T Consensus 261 ~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~ 340 (369)
T cd00614 261 ERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVESLVEHPASMTHSQLPPEERAA 340 (369)
T ss_pred cEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCceeeeCCcccccccCCHHHHHh
Confidence 543333210 00001111244567777776 3355555555555541 1 110 1
Q ss_pred CCCCCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 319 FGADAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 319 f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
.|..++.+|+|++. |+.+.+++.|.+.+
T Consensus 341 ~g~~~~liR~svGl--E~~~dl~~dl~~al 368 (369)
T cd00614 341 AGITPGLVRLSVGI--EDVEDLIADLEQAL 368 (369)
T ss_pred cCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence 12235689999977 34555666666654
No 173
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.92 E-value=5.1e-23 Score=193.30 Aligned_cols=286 Identities=13% Similarity=0.088 Sum_probs=190.4
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHH----hCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDY----LRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~----~g~~~~~ 113 (360)
..+|++.+++++|. ++.+++++| ++++..++..++++||+ |+++.|.|......+.. .|+++..
T Consensus 63 ~~~Le~~lA~l~G~-------~~al~~~sG-~~Ai~~~l~al~~~Gd~----Vv~~~~~y~~~~~~~~~~~~~~gi~~~~ 130 (386)
T PRK06767 63 VKLFEERMAVLEGG-------EEALAFGSG-MAAISATLIGFLKAGDH----IICSNGLYGCTYGFLEVLEEKFMITHSF 130 (386)
T ss_pred hHHHHHHHHHHhCC-------CcEEEECCH-HHHHHHHHHHHhCCCCE----EEEcCCcHHHHHHHHHHHHhhcCeEEEE
Confidence 38999999999994 445555555 67899999999999998 99999999877666543 4666555
Q ss_pred ecC-Ccccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDG-DANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~-~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++. +.+.+.. ++++++|++++|+||||.+.+ +.+.++|+++|+++|+|++|..+... .+-..+.++++.|+||.+
T Consensus 131 ~~~~d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~-~pl~~g~Div~~S~sK~l 209 (386)
T PRK06767 131 CDMETEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQ-RPLELGCDAVVHSATKYI 209 (386)
T ss_pred eCCCCHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccC-CchhcCCcEEEecCccee
Confidence 543 2344433 467999999999999999988 67788888899999999999743211 112345689999999999
Q ss_pred CCCCceE-EEEeecCHHHHHHHH-HHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018172 190 GHAGSRI-GWALVKDTEVARKMT-RFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGV 267 (360)
Q Consensus 190 ~~~G~r~-G~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 267 (360)
+.+|.++ ||+++ +.++++.+. ..+...+...+++.+.++...+ +.+....++.+++.+.+.+.|+++++
T Consensus 210 ~g~g~~~gG~v~~-~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L--------~tl~~r~~~~~~~a~~la~~L~~~p~ 280 (386)
T PRK06767 210 GGHGDVVAGVTIC-KTRALAEKIRPMRKDIGGIMAPFDAWLLLRGL--------KTLAVRMDRHCDNAEKIVSFLKNHDA 280 (386)
T ss_pred cCCCCceeEEEEe-ChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCC--------CcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 8888885 88888 677666653 3333333445555444433322 23345556778889999999999987
Q ss_pred cccCCCCCcccccccccCCCCCCcccccCCch----HHHHHHHHhhCeeeeCCCCC----------------------CC
Q 018172 268 FGLPEYPLEYCNFTGKFTNSHPGFAWLESKED----EDCEKLLRAERIMARGGRRF----------------------GA 321 (360)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~gI~~~pg~~f----------------------~~ 321 (360)
+....++. +..........+..+.+.+++. ..+.+.|+..++.+.-|... |.
T Consensus 281 v~~v~~p~--~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi 358 (386)
T PRK06767 281 VEGVWYPE--GELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGI 358 (386)
T ss_pred ccEEECCC--cHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCC
Confidence 77544331 1111111123345666776532 55667777667666555211 12
Q ss_pred CCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 322 DAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 322 ~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
.++.+|||++.+ +.+.+++-|.+.+.
T Consensus 359 ~~~l~R~svGlE--~~~dl~~dl~~al~ 384 (386)
T PRK06767 359 YDNLIRLSVGLE--SWEDIVSDLEQALK 384 (386)
T ss_pred CCCeEEEEeccC--CHHHHHHHHHHHHh
Confidence 356899999662 24445555555543
No 174
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=7e-24 Score=188.02 Aligned_cols=300 Identities=17% Similarity=0.172 Sum_probs=211.8
Q ss_pred eecCCcccccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcE--EEcCChHHHHHHHHHhhc--CCCCCCCceEEE
Q 018172 17 VISGSDLMSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHI--VIGTGSTQLYQAALYALS--SPGGPEPISVVS 92 (360)
Q Consensus 17 ~~~~~~~~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i--~~t~G~t~~l~~~~~~l~--~~gd~~~~~vl~ 92 (360)
.+...+....|-+..|. +++++++++++--.+.+.-.+++| +-|.|+|.||......+- .+..+ |++
T Consensus 55 ~l~~~~~~k~Yl~i~G~-----~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~----vwi 125 (396)
T COG1448 55 RLLEQEKTKNYLPIEGL-----PEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDAT----VWI 125 (396)
T ss_pred HhhccccccccCCcCCc-----HHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCce----EEe
Confidence 33444445568899998 999999999743222222233333 467999999999988773 34444 999
Q ss_pred eCCCCCCcHHHHHHhCCeeeeecC--------Ccccccc----C-CCeeEEEEcCCCCCCcccchH----HHHHHhhhcC
Q 018172 93 AAPYYSQYPAETDYLRSGLYKWDG--------DANTFDK----N-NGAYIEVVNSPNNPDGTIREA----VLAKVNRSAE 155 (360)
Q Consensus 93 ~~p~~~~~~~~~~~~g~~~~~~~~--------~~~~~~~----~-~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~ 155 (360)
++|+|+++..+++..|.++...+- |.+++.. - ++..+++..+.|||||.-+++ .+.++-++++
T Consensus 126 s~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~ 205 (396)
T COG1448 126 SDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERG 205 (396)
T ss_pred CCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC
Confidence 999999999999999999987762 2222221 1 334445556779999999882 4455555699
Q ss_pred cEEEEeecccCCC--CCc-------CCCCCCccEEEeccccccCCCCceEEEEe--ecCHHHHHH----HHHHHhhcccc
Q 018172 156 GKLIHDLAYYWPQ--YTP-------ITGAADHDIMLFTLSKCTGHAGSRIGWAL--VKDTEVARK----MTRFIELGSIG 220 (360)
Q Consensus 156 ~~li~D~ay~~~~--~~~-------~~~~~~~~i~~~S~sK~~~~~G~r~G~~~--~~~~~~~~~----l~~~~~~~~~~ 220 (360)
.+.+.|-||.+.. +.. +.....-.++..||||.||+.|.|+|.+. +.+.+.++. +....+..-++
T Consensus 206 lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySn 285 (396)
T COG1448 206 LIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSN 285 (396)
T ss_pred CeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCC
Confidence 9999999999532 111 11222337889999999999999999743 345544444 44555555667
Q ss_pred CChHHHHHHHHHhcc--cCCCchhHHHHHHHHHHHHHHHHHHHHHhcC---CcccCCCCCcccccccccCCCCCCccccc
Q 018172 221 VSKESQLRAAKILGI--VSDDYPNFFEYGRRLMSERWNMLRQVIRQSG---VFGLPEYPLEYCNFTGKFTNSHPGFAWLE 295 (360)
Q Consensus 221 ~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (360)
++..+....+.+|+. +...|...++.+++++.++|..+.+.|+... .+..... -.|+|....
T Consensus 286 PP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~-------------Q~GMFsy~G 352 (396)
T COG1448 286 PPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIIS-------------QRGMFSYTG 352 (396)
T ss_pred CchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhh-------------cCceeecCC
Confidence 777888888888873 2234678899999999999999999999852 1222222 333454554
Q ss_pred CCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHH
Q 018172 296 SKEDEDCEKLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQ 348 (360)
Q Consensus 296 ~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~ 348 (360)
+. .+.+.++..++||++.- .+ |+|++. ++..++.+.++|.+++
T Consensus 353 ls-~~QV~rLree~~IY~v~-------sG--Ri~vaGl~~~ni~~va~ai~~v~ 396 (396)
T COG1448 353 LS-PEQVDRLREEFGIYLVA-------SG--RINVAGLNTSNIDYVAKAIAAVL 396 (396)
T ss_pred CC-HHHHHHHHHhccEEEec-------CC--eeeeccCChhhHHHHHHHHHhhC
Confidence 43 38888888899999874 22 999988 9999999999998763
No 175
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.92 E-value=1.4e-22 Score=190.64 Aligned_cols=295 Identities=12% Similarity=0.073 Sum_probs=204.3
Q ss_pred ccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHH
Q 018172 27 LSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDY 106 (360)
Q Consensus 27 y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~ 106 (360)
|+...+. .+|+++++++++. ++.+++++|.++.. .++..++++||+ |+++++.|.++...+..
T Consensus 39 yg~~~~~-----~~LE~~lA~~~g~-------e~al~~~sG~~a~~-~~i~~l~~~GD~----Vl~~~~~h~s~~~~~~l 101 (392)
T PLN03227 39 YGTIDAH-----LELEQCMAEFLGT-------ESAILYSDGASTTS-STVAAFAKRGDL----LVVDRGVNEALLVGVSL 101 (392)
T ss_pred cCChHHH-----HHHHHHHHHHhCC-------CcEEEecCcHHHHH-HHHHHhCCCCCE----EEEeccccHHHHHHHHH
Confidence 6655555 9999999999995 46788888877776 777778999998 99999999999888888
Q ss_pred hCCeeeeecCC-cccccc----------------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC
Q 018172 107 LRSGLYKWDGD-ANTFDK----------------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ 168 (360)
Q Consensus 107 ~g~~~~~~~~~-~~~~~~----------------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~ 168 (360)
.+.+++.++.. .+.++. .+++++|++.+++||+|.+.+ +.+.++|+++|+++|+||+|..+.
T Consensus 102 ~~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~ 181 (392)
T PLN03227 102 SRANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGT 181 (392)
T ss_pred cCCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccc
Confidence 88887766532 222111 236889999999999999998 678899999999999999998322
Q ss_pred CC----c------CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCC--hHHHHHHHHHhccc
Q 018172 169 YT----P------ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVS--KESQLRAAKILGIV 236 (360)
Q Consensus 169 ~~----~------~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~l~~~ 236 (360)
.. . +....+.++++.|+||.++..| |++++ +.++++.+........++.+ +..+.++.+++...
T Consensus 182 ~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~g---g~v~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~ 257 (392)
T PLN03227 182 LGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVG---GMTVG-SEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGE 257 (392)
T ss_pred cCCCCCcHHHHcCCCCCCCceEEEeechhhhhccC---cEEec-CHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHH
Confidence 11 1 1112456899999999877454 88887 78888877654433344443 55666666555422
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch------------HHHHH
Q 018172 237 SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED------------EDCEK 304 (360)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~ 304 (360)
.. .++.+++++++.+++.+.|++.+...+....+... ....+.++++.+.+.+. ..+.+
T Consensus 258 ~~-----~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~----~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 328 (392)
T PLN03227 258 LA-----GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLV----ITSDPISPIIYLRLSDQEATRRTDETLILDQIAH 328 (392)
T ss_pred hc-----CHHHHHHHHHHHHHHHHHHHhcCCccccccccccc----cCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHH
Confidence 11 24567778888888888887532111111122110 01123344555555432 26777
Q ss_pred HHHhhCeeeeCCC-C----C-CCCCCeEEEEecC--ChHHHHHHHHHHHHHHhch
Q 018172 305 LLRAERIMARGGR-R----F-GADAKYARVSMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 305 ~l~~~gI~~~pg~-~----f-~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
.+.++|+.+.+.. . + -.++..+|+++.. ++|++++++++|++++.+.
T Consensus 329 ~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 329 HSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred HHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 8889999987521 1 1 1135689999976 9999999999999998654
No 176
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.92 E-value=1.3e-23 Score=198.86 Aligned_cols=261 Identities=15% Similarity=0.111 Sum_probs=185.5
Q ss_pred CcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHh-C------------CeeeeecC-Ccccccc--
Q 018172 60 RHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYL-R------------SGLYKWDG-DANTFDK-- 123 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~-g------------~~~~~~~~-~~~~~~~-- 123 (360)
+++++++|+++++..+++.+..+|+. +++..+++|..+...+... | .++..++. |.+.++.
T Consensus 104 ~~v~~~~sgsea~~~al~~~~~~g~~---~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 180 (398)
T PRK03244 104 GRVFFCNSGAEANEAAFKLARLTGRT---KIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAV 180 (398)
T ss_pred CEEEEeCchHHHHHHHHHHHHHHCCC---eEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhh
Confidence 58999999999999999987666643 3888888998775443322 2 12233331 3333332
Q ss_pred CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCc--C--C-CCCCccEEEeccccccCCCC
Q 018172 124 NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTP--I--T-GAADHDIMLFTLSKCTGHAG 193 (360)
Q Consensus 124 ~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~--~--~-~~~~~~i~~~S~sK~~~~~G 193 (360)
.+++++|++..++||||.+++ +.+.++|+++|+++|+||+|.+..... . . .....+ +.+|||.++ +|
T Consensus 181 ~~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pD--i~t~sK~l~-~G 257 (398)
T PRK03244 181 DDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPD--VVTLAKGLG-GG 257 (398)
T ss_pred cCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCC--EEEEchhhh-CC
Confidence 357889999999999999987 366789999999999999997421111 1 0 111122 348899999 99
Q ss_pred ceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCC
Q 018172 194 SRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEY 273 (360)
Q Consensus 194 ~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 273 (360)
+|+||+++ ++++++.+.......+++.|++.+.++.+.++.+.+. +..++++++.+++.+.|++++. ....
T Consensus 258 ~~ig~~~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~------~~~~~~~~~~~~l~~~L~~~~~-~~~~- 328 (398)
T PRK03244 258 LPIGACLA-FGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASE------GLLENAERLGEQLRAGIEALGH-PLVD- 328 (398)
T ss_pred cccEEEEE-cHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhc------cHHHHHHHHHHHHHHHHHhcCC-Ccee-
Confidence 99999999 7888888865444567789999999999988754322 3456666777888888887531 1100
Q ss_pred CCcccccccccCCCCCCcccccCCch--HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC--ChHHHHHHHHHHHHHHh
Q 018172 274 PLEYCNFTGKFTNSHPGFAWLESKED--EDCEKLLRAERIMARGGRRFGADAKYARVSMLS--REEIFNIFLERLSAIQG 349 (360)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~ 349 (360)
.+.+.++++|+.++.. ..+.+.|.++||.+.+. ..+.+||++.. +++++++++++|.+++.
T Consensus 329 ----------~v~g~g~~~~i~~~~~~~~~~~~~l~~~Gv~~~~~-----~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~ 393 (398)
T PRK03244 329 ----------HVRGRGLLLGIVLTAPVAKAVEAAAREAGFLVNAV-----APDVIRLAPPLIITDAQVDAFVAALPAILD 393 (398)
T ss_pred ----------eEeeccEEEEEEEeccHHHHHHHHHHHCCeEEeec-----CCCEEEEECCCcCCHHHHHHHHHHHHHHHH
Confidence 1123455788887542 66778888999999873 14689999654 89999999999999997
Q ss_pred c
Q 018172 350 G 350 (360)
Q Consensus 350 ~ 350 (360)
+
T Consensus 394 ~ 394 (398)
T PRK03244 394 A 394 (398)
T ss_pred h
Confidence 5
No 177
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=1.5e-22 Score=190.07 Aligned_cols=287 Identities=15% Similarity=0.097 Sum_probs=192.3
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHH----hCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDY----LRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~----~g~~~~~ 113 (360)
..+||++++++++. + ..++++ ++++++..++..++++||+ |+++.|+|......+.. .|++++.
T Consensus 63 ~~~Le~~lA~~~g~------~-~~i~~~-sG~~Ai~~~l~all~~Gd~----Vl~~~~~y~~t~~~~~~~~~~~gi~~~~ 130 (388)
T PRK07811 63 RTALEEQLAALEGG------A-YGRAFS-SGMAATDCLLRAVLRPGDH----IVIPNDAYGGTFRLIDKVFTRWGVEYTP 130 (388)
T ss_pred HHHHHHHHHHHhCC------C-ceEEeC-CHHHHHHHHHHHHhCCCCE----EEEcCCCchHHHHHHHHhCcCCCeEEEE
Confidence 48999999999985 3 345555 5589999999999999998 99999999976554433 5888777
Q ss_pred ecC-Ccccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDG-DANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~-~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++. |.+.+.. ++++++|++++|+||||...+ +.+.++|+++|+++|+|++|..+... .+...+.+++++|++|.+
T Consensus 131 ~d~~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~-~p~~~gaDivv~S~sK~l 209 (388)
T PRK07811 131 VDLSDLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQ-QPLALGADVVVHSTTKYI 209 (388)
T ss_pred eCCCCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccC-CchhhCCcEEEecCceee
Confidence 764 3344443 468999999999999999887 67788888899999999999854321 112345679999999999
Q ss_pred CCCC-ceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 190 GHAG-SRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 190 ~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+.+| .+.||++++++++.+.+...+...+...++.....+...++ .+....++.+++.+.+.+.|++++.+
T Consensus 210 ~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~--------tl~~R~~~~~~na~~la~~L~~~p~v 281 (388)
T PRK07811 210 GGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLK--------TLAVRMDRHSENAEAVAEFLAGHPEV 281 (388)
T ss_pred cCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccC--------cHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 8644 56799988678888888766655455555554433333332 24455555677888999999999876
Q ss_pred ccCCCCCcc----cccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCC-----------------------C
Q 018172 269 GLPEYPLEY----CNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRF-----------------------G 320 (360)
Q Consensus 269 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f-----------------------~ 320 (360)
..+.+++.. +........+.+..+.+.+++. +.+.+.+.+-.+. ..|..+ |
T Consensus 282 ~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~-~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g 360 (388)
T PRK07811 282 STVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTKVF-TLAESLGGVESLIEHPSAMTHASTAGSQLE 360 (388)
T ss_pred eEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCCcc-eeeccCCCCcceEeCCcccCcccCCHhhcC
Confidence 654444321 1111111234556778888643 4444444443432 112112 2
Q ss_pred CCCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 321 ADAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 321 ~~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
..++.+|||++.+ +.+.+++.|.+.+
T Consensus 361 i~~~liR~svGlE--~~~dl~~dl~~al 386 (388)
T PRK07811 361 VPDDLVRLSVGIE--DVADLLADLEQAL 386 (388)
T ss_pred CCCCEEEEEeCCC--CHHHHHHHHHHHh
Confidence 2356899999762 2344455555544
No 178
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.92 E-value=6.4e-23 Score=197.03 Aligned_cols=276 Identities=17% Similarity=0.158 Sum_probs=193.2
Q ss_pred HHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc-CCCCCCCceEEEeCCCCCCcHHHHHH----hCCeeeeecCC
Q 018172 43 EAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS-SPGGPEPISVVSAAPYYSQYPAETDY----LRSGLYKWDGD 117 (360)
Q Consensus 43 ~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~-~~gd~~~~~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~ 117 (360)
+.+++++|. +.+++++|+|+++++..++.++. ++|++ |+++++.|+++...++. .|++++.++.+
T Consensus 119 ~~la~l~g~------~~~~v~~~~g~t~~~~~~~~a~~~~~g~~----Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~ 188 (447)
T PRK00451 119 TMICELTGM------DVANASMYDGATALAEAALMAVRITKRKK----VLVSGAVHPEYREVLKTYLKGQGIEVVEVPYE 188 (447)
T ss_pred HHHHHHhCC------CcceEEecCcHHHHHHHHHHHHHhcCCCE----EEEeCccCHHHHHHHHHHHHhCCcEEEEecCC
Confidence 444556654 44589999999999999888874 78887 99999999999887765 58999999876
Q ss_pred cccccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEE--eecccCCCCCcCCCCCCccEEEe---c
Q 018172 118 ANTFDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIH--DLAYYWPQYTPITGAADHDIMLF---T 184 (360)
Q Consensus 118 ~~~~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~--D~ay~~~~~~~~~~~~~~~i~~~---S 184 (360)
.+.++. ++++++|++++| ||||.+.+ +.+.++|+++|+++++ |.+. .+ ........+.+++++ +
T Consensus 189 ~~~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~~-~g-~~~~~~~~~~D~~~~s~~k 265 (447)
T PRK00451 189 DGVTDLEALEAAVDDDTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPVS-LG-LLKPPGEYGADIVVGEGQP 265 (447)
T ss_pred CCCCCHHHHHHhcCCCeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChHH-hc-cCCCcccCCCCEEEECCCc
Confidence 432211 468999999999 89999988 7788889989999988 4432 11 122235677788877 6
Q ss_pred cccccCCCCceEEEEeecCHHHHHHH----------------------------HHHHhhccccCChHHH-HHHHHHhcc
Q 018172 185 LSKCTGHAGSRIGWALVKDTEVARKM----------------------------TRFIELGSIGVSKESQ-LRAAKILGI 235 (360)
Q Consensus 185 ~sK~~~~~G~r~G~~~~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~~-~~~~~~l~~ 235 (360)
|||.+.+.|+++||+++ ++++++.+ +..+.....+.+...| .+++..++.
T Consensus 266 ~~~~~~~~Gpg~G~l~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~ 344 (447)
T PRK00451 266 LGIPLSFGGPYLGFFAT-RKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSL 344 (447)
T ss_pred CCCCCCCCCCCchHHHh-hHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 67777788999999988 67877764 1111111222222333 333333443
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-chHHHHHHHHhhCeee-
Q 018172 236 VSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-EDEDCEKLLRAERIMA- 313 (360)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gI~~- 313 (360)
+. +..+++.++++.++++++.+.|++++++.+. .+.++. ++.++++ +..++.+.|.++||..
T Consensus 345 ~~---~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~~~~-----------~~~v~~~~~~~~~~~~L~~~gi~~~ 408 (447)
T PRK00451 345 LG---PEGLRELAEQNHQKAHYLAERLAEIGGVELF--DGPFFN-----------EFVVRLPKPAEEVNEALLEKGILGG 408 (447)
T ss_pred HC---HHHHHHHHHHHHHHHHHHHHHHhhcCCEEec--CCCeEE-----------EEEEecCCCHHHHHHHHHhcCCCCC
Confidence 32 2778999999999999999999998766653 222211 1224433 3367777888888873
Q ss_pred eCCCCCCC-CCCeEEEEec--CChHHHHHHHHHHHHHH
Q 018172 314 RGGRRFGA-DAKYARVSML--SREEIFNIFLERLSAIQ 348 (360)
Q Consensus 314 ~pg~~f~~-~~~~~R~s~~--~~~e~~~~~~~~l~~~~ 348 (360)
.++..|+. ..+++|+|+. .++|++++++++|++++
T Consensus 409 ~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 409 YDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred cccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 45555542 2468999985 49999999999999875
No 179
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=1.5e-22 Score=189.64 Aligned_cols=252 Identities=13% Similarity=0.103 Sum_probs=176.3
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHH---HhCCeeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETD---YLRSGLYKW 114 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~---~~g~~~~~~ 114 (360)
..+|++.++++++. + ++++++|+++++..++..++++||+ |+++.|+|..+...++ ..|+++..+
T Consensus 55 ~~~lE~~lA~l~g~-------~-~~l~~~sG~~Ai~~~l~~ll~~GD~----Vlv~~~~y~~~~~~~~~~~~~g~~v~~~ 122 (385)
T PRK08574 55 LRPLEEALAKLEGG-------V-DALAFNSGMAAISTLFFSLLKAGDR----VVLPMEAYGTTLRLLKSLEKFGVKVVLA 122 (385)
T ss_pred HHHHHHHHHHHhCC-------C-cEEEeCCHHHHHHHHHHHHhCCCCE----EEEcCCCchhHHHHHHHhhccCcEEEEE
Confidence 49999999999984 3 5778888899999999999999998 9999999999877764 458888877
Q ss_pred cCCcccccc--CC-CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC-CCcCCCCCCccEEEecccccc
Q 018172 115 DGDANTFDK--NN-GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ-YTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 115 ~~~~~~~~~--~~-~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~-~~~~~~~~~~~i~~~S~sK~~ 189 (360)
..+.+.+.. ++ ++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+. ..++ ..+.+++++|+||.+
T Consensus 123 ~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l--~~GaDivv~S~sK~l 200 (385)
T PRK08574 123 YPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPL--RHGADFVVHSLTKYI 200 (385)
T ss_pred CCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCChh--hhCCcEEEeeCceee
Confidence 766555543 34 7999999999999999998 677788888999999999997542 2222 356789999999999
Q ss_pred CCCCce-EEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 190 GHAGSR-IGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 190 ~~~G~r-~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+.+|-. .|++++.++++.+.++..+...+...+++....+...++ .+....++..++...+.+.|++++.+
T Consensus 201 ~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~--------tL~~R~~~~~~na~~la~~L~~~p~v 272 (385)
T PRK08574 201 AGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLK--------TLEVRFERQCRNAMAIAEFLSEHPKV 272 (385)
T ss_pred cCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccC--------cHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 756654 465666678888888877665555555554433333232 23334444455778888899988766
Q ss_pred ccCCCCCcc----cccccccC--CCCCCcccccCCch-HHHHHHHHhhCe
Q 018172 269 GLPEYPLEY----CNFTGKFT--NSHPGFAWLESKED-EDCEKLLRAERI 311 (360)
Q Consensus 269 ~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~l~~~gI 311 (360)
..+.+++.. +....... .+.+..+.++++++ +.+.+.+.+-.+
T Consensus 273 ~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~l~l 322 (385)
T PRK08574 273 AEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGGRDAVLKFLRSLKL 322 (385)
T ss_pred CEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCCHHHHHHHHHcCCc
Confidence 654444321 11111111 13455678888643 444444444343
No 180
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.91 E-value=1.5e-22 Score=190.20 Aligned_cols=287 Identities=16% Similarity=0.125 Sum_probs=190.2
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH----HHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA----ETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~----~~~~~g~~~~~ 113 (360)
..+|++++++++|. + ..++++++++++..++..++++||+ |+++.|.|..... .+...|++++.
T Consensus 61 ~~~le~~lA~l~g~-------~-~av~~~sG~~Ai~~~l~al~~~Gd~----Vi~~~~~y~~t~~~~~~~~~~~G~~~~~ 128 (391)
T TIGR01328 61 VSNLEGRIAFLEGT-------E-AAVATSSGMGAIAATLLTILKAGDH----LISDECLYGCTFALLEHALTKFGIQVDF 128 (391)
T ss_pred HHHHHHHHHHHhCC-------C-cEEEECCHHHHHHHHHHHHhCCCCE----EEEecCcchHHHHHHHHHHhcCCeEEEE
Confidence 48899999999995 3 3566777788999999999999998 9999998876543 34557999888
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++++ .+.+.. ++++++|++++|+||||.+.+ +.+.++|+++|+++|+|++|..+.. ..+-..+.+++++|+||.+
T Consensus 129 vd~~d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~-~~~~~~g~Divv~S~sK~l 207 (391)
T TIGR01328 129 INMAIPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPML-TNPVALGVDVVVHSATKYI 207 (391)
T ss_pred ECCCCHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhcc-CCchhcCCCEEEccccccc
Confidence 8765 333433 467999999999999999988 6778888889999999999985422 1122346779999999999
Q ss_pred CCCCceE-EEEeecCHHHHHHHHHHHh--hccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 018172 190 GHAGSRI-GWALVKDTEVARKMTRFIE--LGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSG 266 (360)
Q Consensus 190 ~~~G~r~-G~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 266 (360)
+.+|.++ |++++ ++++++.++.... ..+...++.....+...+ +.+....++..++.+.+.+.|++++
T Consensus 208 gg~g~~~gG~v~~-~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L--------~tl~~r~~~~~~na~~la~~L~~~p 278 (391)
T TIGR01328 208 GGHGDVVAGLICG-KAELLQQIRMVGIKDMTGSVISPFDAWLILRGL--------KTLNIRMKRHSENAMKVAEYLKSHP 278 (391)
T ss_pred cCCCCceEEEEEc-CHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCc--------CcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9888775 56665 8898888875432 223334444444333322 2234446667778888999999988
Q ss_pred CcccCCCCCcc----cccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCC----------------------
Q 018172 267 VFGLPEYPLEY----CNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRF---------------------- 319 (360)
Q Consensus 267 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f---------------------- 319 (360)
.+..+.+++.. +........+.+..+.+.++++ +.+.+.+.+-.+. ..+..+
T Consensus 279 ~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~f~~~l~~~-~~~~s~G~~~sl~~~~~~~~~~~~~~~~ 357 (391)
T TIGR01328 279 AVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAKKLLNNLKLI-RLAVSLGDAETLIQHPASMTHAVVPKEE 357 (391)
T ss_pred CccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHHHHHHhCCcc-eEecCCCCCcccCcCCCccccccCCHHH
Confidence 76655444321 1111111233455677887643 4444444333332 112112
Q ss_pred ----CCCCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 320 ----GADAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 320 ----~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
|..++.+|||++.+ +.+.+++.|.+.++
T Consensus 358 ~~~~gi~~~liR~svGlE--~~~dl~~dl~~al~ 389 (391)
T TIGR01328 358 REAAGITDGMIRLSVGLE--DADDLIADLKQALD 389 (391)
T ss_pred HHhcCCCCCeEEEEeCcC--CHHHHHHHHHHHHh
Confidence 11246799999662 24455555555554
No 181
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=1.9e-22 Score=189.42 Aligned_cols=215 Identities=12% Similarity=0.054 Sum_probs=162.7
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH----HHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA----ETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~----~~~~~g~~~~~ 113 (360)
..+|++.++++++. +++++++|+++++..++.+++++||+ |+++.|+|..+.. .+...|++++.
T Consensus 67 ~~~Le~~lA~l~g~--------~~~l~~~sgt~Ai~~~l~al~~~GD~----Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~ 134 (394)
T PRK07050 67 SLALAQRLAEIEGG--------RHALLQPSGLAAISLVYFGLVKAGDD----VLIPDNAYGPNRDHGEWLARDFGITVRF 134 (394)
T ss_pred HHHHHHHHHHHhCC--------CeEEEeccHHHHHHHHHHHHhCCCCE----EEEecCCcccHHHHHHHHHHhcCeEEEE
Confidence 48999999999984 37999999999999999999999999 9999999998774 45667999988
Q ss_pred ecCCc-ccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGDA-NTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~~-~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++... +.+.. .+++|+|++++|+||+|...+ +.+.++|+++|+++|+|++|..+.. .-+...+.++++.|++|.+
T Consensus 135 vd~~~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~-~~~l~~GaDi~v~S~tK~~ 213 (394)
T PRK07050 135 YDPLIGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLA-FKPFEHGVDISVQALTKYQ 213 (394)
T ss_pred ECCCCHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccc-cCHHHcCCeEEEEECCcee
Confidence 86532 23332 578999999999999998877 6778888889999999999986432 1112345689999999988
Q ss_pred C-CCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 190 G-HAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 190 ~-~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+ ..+.+.|++++.++++.+.++..+...+.+.++.....+...++ .... ..++..++...+.+.|.+++.+
T Consensus 214 ~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~-------tl~~-Rl~~~~~~a~~la~~L~~~p~v 285 (394)
T PRK07050 214 SGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLP-------SLQV-RLAAHDRSALEVAEWLKARPEI 285 (394)
T ss_pred cCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCC-------cHHH-HHHHHHHHHHHHHHHHHhCCCc
Confidence 6 34456898888788899999887776667777766655544333 3333 3344445555788888888766
Q ss_pred ccCCC
Q 018172 269 GLPEY 273 (360)
Q Consensus 269 ~~~~~ 273 (360)
....+
T Consensus 286 ~~v~~ 290 (394)
T PRK07050 286 ATVLH 290 (394)
T ss_pred cEEEC
Confidence 55443
No 182
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=3.1e-22 Score=188.05 Aligned_cols=287 Identities=16% Similarity=0.125 Sum_probs=196.1
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH----HHHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP----AETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~----~~~~~~g~~~~~ 113 (360)
..+|++++++++|. + +.+++++| +.++..++. ++++||+ |+++.|.|+... ..++..|++++.
T Consensus 56 ~~~le~~lA~l~g~------~-~~v~~~sG-~~ai~~~l~-~l~~Gd~----Vlv~~~~y~~~~~~~~~~~~~~G~~v~~ 122 (390)
T PRK08064 56 REALEDIIAELEGG------T-KGFAFASG-MAAISTAFL-LLSKGDH----VLISEDVYGGTYRMITEVLSRFGIEHTF 122 (390)
T ss_pred HHHHHHHHHHHhCC------C-CeEEECCH-HHHHHHHHH-HhCCCCE----EEEccCccchHHHHHHHHHHHcCCEEEE
Confidence 48999999999985 3 46776666 667877775 7788998 999999998654 345567999998
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+ .+.+.. ++++++|++++|+||||.+.+ +.+.++|+++|+++|+|++|..+... .+...+.++++.|+||.+
T Consensus 123 v~~~d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~-~~~~~g~Divv~S~tK~~ 201 (390)
T PRK08064 123 VDMTNLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQ-KPLDLGADVVLHSATKFL 201 (390)
T ss_pred ECCCCHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCccccc-CchhhCCcEEEeecceec
Confidence 8764 344433 468999999999999999988 67788888899999999999864321 112456789999999997
Q ss_pred C-CCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 190 G-HAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 190 ~-~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+ .+|...|++++.++++++.++..+..++...++.....+ +..+ +.+....++..++...+.+.|++++.+
T Consensus 202 ~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l~---~~gl-----~tl~~R~~~~~~~a~~la~~L~~~~~v 273 (390)
T PRK08064 202 AGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWLV---LRGL-----KTLHVRLEHSSETANKIALYLQEHPKV 273 (390)
T ss_pred cCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHH---Hccc-----CcHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 5 445567877776788999998887655555554444432 2221 345566666688888889999988755
Q ss_pred ccCCCCCcc----cccccccCCCCCCcccccCCchHHHHHHHHhhCe---eeeCCCC----------------------C
Q 018172 269 GLPEYPLEY----CNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERI---MARGGRR----------------------F 319 (360)
Q Consensus 269 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI---~~~pg~~----------------------f 319 (360)
....+++-. +.+......+.+..+.+.+++.+.+.+.+.+.++ .+.-|.. .
T Consensus 274 ~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~ 353 (390)
T PRK08064 274 QNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEEAVRQFVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDER 353 (390)
T ss_pred ceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCCcceEcccCCCCcceeECCcccccccCCHHHHHhc
Confidence 433333211 1111112234455677777655667777777777 3333310 1
Q ss_pred CCCCCeEEEEecC--ChHHHHHHHHHHHH
Q 018172 320 GADAKYARVSMLS--REEIFNIFLERLSA 346 (360)
Q Consensus 320 ~~~~~~~R~s~~~--~~e~~~~~~~~l~~ 346 (360)
|..++.+|+|++. .++.++.+.++|++
T Consensus 354 gi~~~liR~SvGle~~~dli~dl~~Al~~ 382 (390)
T PRK08064 354 GITDGLLRLSVGLENVDDLIADFEQALSY 382 (390)
T ss_pred CCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 1235789999977 45556666666655
No 183
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.91 E-value=2.7e-22 Score=190.44 Aligned_cols=278 Identities=15% Similarity=0.128 Sum_probs=192.4
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC--CCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeec
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS--PGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWD 115 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~--~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~ 115 (360)
..+|++.++++++. ++.+++++| ++++..++..+.. +++. |+.....|.+....+...|.++..++
T Consensus 93 ~~~l~~~la~~~g~-------~~~~~~~sG-~~an~~ai~~l~~~~~~~~----i~~~~~~h~s~~~~~~~~~~~~~~~~ 160 (407)
T PRK09064 93 HVELERELADLHGK-------EAALVFTSG-YVSNDATLSTLAKLIPDCV----IFSDELNHASMIEGIRRSRCEKHIFR 160 (407)
T ss_pred HHHHHHHHHHHhCC-------CcEEEECcH-HHHHHHHHHHHhCCCCCCE----EEEeCcchHHHHHHHHHcCCcEEEEC
Confidence 37788888888773 445666665 5676667776654 5553 55555667766677777788877776
Q ss_pred C-Ccccc---cc---CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC----cC---CCC-CCcc
Q 018172 116 G-DANTF---DK---NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT----PI---TGA-ADHD 179 (360)
Q Consensus 116 ~-~~~~~---~~---~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~----~~---~~~-~~~~ 179 (360)
. |.+.+ .. .+++++|++++|+||+|.+.+ +.+.++|+++|+++|+||+|..+.+. .. .+. .+.+
T Consensus 161 ~~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~d 240 (407)
T PRK09064 161 HNDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRID 240 (407)
T ss_pred CCCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCe
Confidence 4 22222 11 146899999999999999988 77888899999999999999732111 11 111 2347
Q ss_pred EEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhc--cccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHH
Q 018172 180 IMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELG--SIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNM 257 (360)
Q Consensus 180 i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 257 (360)
++++||||+||++| ||+++ ++++++.+....... +.+.++..+.++.+.++.+.. ....++++++++++
T Consensus 241 iv~~t~sKa~g~~G---G~~~~-~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~-----~~~~~~~~~~~~~~ 311 (407)
T PRK09064 241 IIEGTLAKAFGVMG---GYIAG-SAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKE-----SNEERERHQERAAK 311 (407)
T ss_pred EEEEecchhhhccC---ceEec-CHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhc-----CHHHHHHHHHHHHH
Confidence 88999999999888 99988 889999887654322 335666777777777765432 13446788899999
Q ss_pred HHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHH-HhhCeeeeCCCCCCC--CCCeEEEEec
Q 018172 258 LRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLL-RAERIMARGGRRFGA--DAKYARVSML 331 (360)
Q Consensus 258 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l-~~~gI~~~pg~~f~~--~~~~~R~s~~ 331 (360)
+.+.|++.+ +.+..+ .++++++.+++. ..+.+.| .++||.+++...... +.+++|+++.
T Consensus 312 l~~~L~~~g-~~~~~~--------------~~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~ 376 (407)
T PRK09064 312 LKAALDAAG-IPVMPN--------------ESHIVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPT 376 (407)
T ss_pred HHHHHHHcC-CCCCCC--------------CCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeC
Confidence 999999874 333222 233555655542 4555555 456999998654332 2368999985
Q ss_pred C--ChHHHHHHHHHHHHHHhch
Q 018172 332 S--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 332 ~--~~e~~~~~~~~l~~~~~~~ 351 (360)
. +++++++++++|++++.+.
T Consensus 377 ~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 377 PFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred CCCCHHHHHHHHHHHHHHHHHc
Confidence 4 9999999999999998653
No 184
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.91 E-value=1.7e-22 Score=188.29 Aligned_cols=283 Identities=16% Similarity=0.081 Sum_probs=186.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCC-----------CCceEEEeCCCCCCc----HHH
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGP-----------EPISVVSAAPYYSQY----PAE 103 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~-----------~~~~vl~~~p~~~~~----~~~ 103 (360)
.++++.+++++|. +++++|+|+|+++++++.+++++||+ ++..|+++.|.|..+ ..+
T Consensus 48 ~~~~~~~a~~~g~--------~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~ 119 (363)
T TIGR01437 48 NKTGEYIANLLGV--------EDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETM 119 (363)
T ss_pred HHHHHHHHHhhCC--------CeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHH
Confidence 5666666666663 36899999999999999999999981 011299999888766 567
Q ss_pred HHHhCCeeeeecCC----cccccc--CCCeeEEE-EcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCC
Q 018172 104 TDYLRSGLYKWDGD----ANTFDK--NNGAYIEV-VNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGA 175 (360)
Q Consensus 104 ~~~~g~~~~~~~~~----~~~~~~--~~~~~~i~-~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~ 175 (360)
+...|++++.++.+ .+.++. +++|++++ +++|+||+|...+ +++.++|+++|+++|+|++|... .. ....
T Consensus 120 ~~~~g~~~v~v~~~~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~-~~-~~~~ 197 (363)
T TIGR01437 120 VRLGGGKVVEAGYANECSAEQLEAAITEKTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEED-LQ-KYYR 197 (363)
T ss_pred HHhcCCeEEEEcCCCCCCHHHHHHhcChhceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCc-hH-HHHH
Confidence 78889999988643 233332 46788765 6788999999888 67888999999999999999721 11 1112
Q ss_pred CCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhcc--ccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHH
Q 018172 176 ADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGS--IGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSE 253 (360)
Q Consensus 176 ~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 253 (360)
.+.+++++|+||.+ +|++.|+++. ++++++.+........ .........++.++++.+.+ +..+..+.+.+
T Consensus 198 ~g~D~~~~S~~K~l--~gp~~G~l~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~----~~~~~~~~~~~ 270 (363)
T TIGR01437 198 LGADLVIYSGAKAI--EGPTSGLVLG-KKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLS----TGKESGAEMVA 270 (363)
T ss_pred cCCCEEEEeCCccc--CCCceEEEEE-cHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHc----cCcccHHHHHH
Confidence 35689999999976 5778999998 7888887754321110 11111222333334443221 11223334445
Q ss_pred HHHHHHHHHHhcCCcccCCCCCcc-cccccccCCCCCCcccccCC----chHHHHHHHHhhC--eeeeCCCCCCCCCCeE
Q 018172 254 RWNMLRQVIRQSGVFGLPEYPLEY-CNFTGKFTNSHPGFAWLESK----EDEDCEKLLRAER--IMARGGRRFGADAKYA 326 (360)
Q Consensus 254 ~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~g--I~~~pg~~f~~~~~~~ 326 (360)
+++.+.+.|++++++.+..+.+.. ..+ ...-+.++.. +..++.+.|++++ |.+++ .|. ..+.+
T Consensus 271 ~~~~l~~~L~~i~g~~~~~~~~~~~~~~-------~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~--~~~-~~~~~ 340 (363)
T TIGR01437 271 KLTPFIEALNTLKGVSASIVQDEAGRDI-------ARAEIRFDESELGMTAADVVQALRQGEPAIYTRG--YKA-NEGII 340 (363)
T ss_pred HHHHHHHHHhcCCCeEEEEecCCCCCcC-------ceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEee--eee-cCCeE
Confidence 677899999999877665322110 000 0001223331 2378888998877 66665 233 47789
Q ss_pred EEEecC-ChHHHHHHHHHHHHHH
Q 018172 327 RVSMLS-REEIFNIFLERLSAIQ 348 (360)
Q Consensus 327 R~s~~~-~~e~~~~~~~~l~~~~ 348 (360)
|+++.. +++|++.++++|.+++
T Consensus 341 ~l~~~~~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 341 EIDPRSVTGGQLDIIVERIREIV 363 (363)
T ss_pred EEEeecCCHHHHHHHHHHHHHhC
Confidence 998866 8999999999998864
No 185
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.91 E-value=5.4e-22 Score=186.03 Aligned_cols=248 Identities=16% Similarity=0.182 Sum_probs=175.1
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH----HHHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP----AETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~----~~~~~~g~~~~~ 113 (360)
..+|++.++++++. + .+++++|+++++..++..++++||+ |+++.+.|.... ..+...|.+++.
T Consensus 56 ~~~le~~la~l~g~-------~-~~~~~~sG~~Ai~~al~al~~~Gd~----Vl~~~~~~~~t~~~~~~~~~~~g~~v~~ 123 (380)
T TIGR01325 56 VAAFEERIAALEGA-------E-RAVATATGMSAIQAALMTLLQAGDH----VVASRSLFGSTVGFISEILPRFGIEVSF 123 (380)
T ss_pred HHHHHHHHHHHhCC-------C-cEEEECCHHHHHHHHHHHHhCCCCE----EEEecCCcchHHHHHHHHHHHhCCEEEE
Confidence 48999999999984 3 5788899999999999999999998 999999987644 356667999988
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC-CcCCCCCCccEEEeccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY-TPITGAADHDIMLFTLSKC 188 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~-~~~~~~~~~~i~~~S~sK~ 188 (360)
++.+ .+.+.. ++++++|++++|+||+|...+ +.+.++|+++|+++|+|++|..+.. .++ ..+.++++.|+||.
T Consensus 124 v~~~d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~pl--~~g~Divv~S~sK~ 201 (380)
T TIGR01325 124 VDPTDLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQPL--KLGADVVVYSATKH 201 (380)
T ss_pred ECCCCHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCch--hhCCCEEEeeccce
Confidence 8764 334432 467899999999999999988 6788888889999999999975321 222 34678999999999
Q ss_pred cCCCCceE-EEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018172 189 TGHAGSRI-GWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGV 267 (360)
Q Consensus 189 ~~~~G~r~-G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 267 (360)
++.+|.++ |++++ ++++++.+.......+.+.++..... ++..+ +.+....++..++.+.+.+.|++++.
T Consensus 202 l~g~g~~~gG~vv~-~~~~~~~l~~~~~~~g~~~~p~~a~~---~l~~l-----~tl~~r~~~~~~~a~~la~~L~~~p~ 272 (380)
T TIGR01325 202 IDGQGRVMGGVIAG-SEELMAEVAVYLRHTGPAMSPFNAWV---LLKGL-----ETLSLRMQKQFDSALAIAEWLQAQPQ 272 (380)
T ss_pred ecCCCCeEEEEEEe-CHHHHHHHHHHHHhhCCCCCHHHHHH---HHhcc-----CcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 98788876 66766 78888888876654444444444333 33322 44555666677788889999999886
Q ss_pred cccCCCCCcc----cccccccCCCCCCcccccCCchHHHHHHHHh
Q 018172 268 FGLPEYPLEY----CNFTGKFTNSHPGFAWLESKEDEDCEKLLRA 308 (360)
Q Consensus 268 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (360)
+..+.+++.. +........+.+..+.+.+++.+.+.+.+..
T Consensus 273 v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~f~~~ 317 (380)
T TIGR01325 273 VQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVADRAAAWKVLDA 317 (380)
T ss_pred ccEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHc
Confidence 6544333311 1111111223455677777643434343333
No 186
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.91 E-value=3.5e-22 Score=188.07 Aligned_cols=239 Identities=14% Similarity=0.138 Sum_probs=167.2
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc----HHHHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY----PAETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~----~~~~~~~g~~~~~ 113 (360)
..+|+++++++.+. + +.+++++++.++..++..++++||+ |+++...|.+. ...++..|++++.
T Consensus 72 ~~~le~~lA~l~g~-------~-~al~~~sG~~Ai~~~l~all~~Gd~----Vl~~~~~~~~t~~~~~~~~~~~G~~v~~ 139 (403)
T PRK07810 72 VSMFEERLRLIEGA-------E-ACFATASGMSAVFTALGALLGAGDR----LVAARSLFGSCFVVCNEILPRWGVETVF 139 (403)
T ss_pred HHHHHHHHHHHhCC-------C-cEEEECChHHHHHHHHHHHhCCCCE----EEEccCCcchHHHHHHHHHHHcCcEEEE
Confidence 38999999999984 3 5677777789988999889999998 99988666544 4456667999998
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+ .+.+.. ++++++|++.+|+||||.+.+ +.+.++|+++|+++|+|++|..+... .+...+.+++++|++|.+
T Consensus 140 vd~~d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~-~~~~~gaDivv~S~tK~l 218 (403)
T PRK07810 140 VDGEDLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQ-RGLPLGADVVVYSGTKHI 218 (403)
T ss_pred ECCCCHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccC-ChhhcCCcEEEccCCcee
Confidence 8754 334433 467999999999999999988 67888888899999999999854321 112346789999999999
Q ss_pred CCCCceE-EEEeecCHHHH-HHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018172 190 GHAGSRI-GWALVKDTEVA-RKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGV 267 (360)
Q Consensus 190 ~~~G~r~-G~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 267 (360)
+..|.++ |++++ +++.+ +.++......+...++..+..+...|+ .+....++..++...+.+.|++++.
T Consensus 219 ~g~g~~~gG~v~~-~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~--------tl~~R~~~~~~~a~~~a~~L~~~p~ 289 (403)
T PRK07810 219 DGQGRVLGGAILG-DREYIDGPVQKLMRHTGPALSAFNAWVLLKGLE--------TLALRVRHSNASALRIAEFLEGHPA 289 (403)
T ss_pred cCCcCceeEEEEe-ChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccC--------cHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 8788887 77777 55544 356655444555677777766655444 3444444556666677788888877
Q ss_pred cccCCCCCcc----cccccccCCCCCCcccccCCc
Q 018172 268 FGLPEYPLEY----CNFTGKFTNSHPGFAWLESKE 298 (360)
Q Consensus 268 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 298 (360)
+..+.+++.. +........+.+..+.+.+++
T Consensus 290 v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~ 324 (403)
T PRK07810 290 VRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDA 324 (403)
T ss_pred ccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 6655444311 111111122345566777754
No 187
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.90 E-value=9.6e-22 Score=186.53 Aligned_cols=277 Identities=16% Similarity=0.106 Sum_probs=193.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC--CCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS--PGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG 116 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~--~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 116 (360)
.+|++.++++++. ++.+++++| ++++..++..+.. +|+. |++....|..+...+...|.+++.++.
T Consensus 93 ~~le~~la~~~g~-------~~~~~~~SG-~~An~~ai~~l~~~~~g~~----I~~~~~~H~s~~~~~~~~g~~~~~~~~ 160 (406)
T PRK13393 93 VLLEAELADLHGK-------EAALLFTSG-YVSNWAALSTLGSRLPGCV----ILSDELNHASMIEGIRHSRAEKRIFRH 160 (406)
T ss_pred HHHHHHHHHHhCC-------CcEEEeCCc-HHHHHHHHHHhhcCCCCCE----EEEccchhHHHHHHHHHcCCeEEEeCC
Confidence 6788888888773 345666665 5688888887754 5665 777778888888888888888777752
Q ss_pred -Ccccccc------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC----CcC---CCC-CCccE
Q 018172 117 -DANTFDK------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY----TPI---TGA-ADHDI 180 (360)
Q Consensus 117 -~~~~~~~------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~----~~~---~~~-~~~~i 180 (360)
|.+.++. ++++++|++++++||+|.+.+ +.+.++|+++++++|+|++|..+.+ ... .+. .+.++
T Consensus 161 ~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i 240 (406)
T PRK13393 161 NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTI 240 (406)
T ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeE
Confidence 3332221 236789999999999999998 7788899999999999999973221 111 111 22467
Q ss_pred EEeccccccCCCCceEEEEeecCHHHHHHHHHHHhh--ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIEL--GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
+++||||.+|++| ||+++ ++++++.+...... .+.+.++..+.++.++++.+.. . ...+.+++++++++
T Consensus 241 ~~~tlsKa~g~~G---G~~~~-~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~----~-~~~~~~~~~~~~~l 311 (406)
T PRK13393 241 IEGTLAKAFGVMG---GYITG-SAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKA----S-SAERERHQDRVARL 311 (406)
T ss_pred EEEeCchhhcccC---ceeeC-CHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhh----C-HHHHHHHHHHHHHH
Confidence 8899999999888 99987 88999988776542 2345667778888888875432 1 12346678888999
Q ss_pred HHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHh-hCeeeeCCCCCCC--CCCeEEEEecC
Q 018172 259 RQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRA-ERIMARGGRRFGA--DAKYARVSMLS 332 (360)
Q Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~-~gI~~~pg~~f~~--~~~~~R~s~~~ 332 (360)
.+.|++.+ +.+..+ .++++.+.+.+. ..+.+.|.+ +||.++++..... +.+++|+++..
T Consensus 312 ~~~L~~~g-~~~~~~--------------~~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~ 376 (406)
T PRK13393 312 RARLDKAG-IPHLPN--------------PSHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSP 376 (406)
T ss_pred HHHHHHcC-CCcCCC--------------CCCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECC
Confidence 99998763 333222 223444444332 455666655 6999998654332 24689999864
Q ss_pred --ChHHHHHHHHHHHHHHhch
Q 018172 333 --REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 333 --~~e~~~~~~~~l~~~~~~~ 351 (360)
++|++++++++|++++.+.
T Consensus 377 ~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 377 LHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred CCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999998653
No 188
>PLN02651 cysteine desulfurase
Probab=99.90 E-value=1.5e-22 Score=189.42 Aligned_cols=273 Identities=14% Similarity=0.079 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh----cCCCCCCCceEEEeCCCCCCcHHHH---HHhCCee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL----SSPGGPEPISVVSAAPYYSQYPAET---DYLRSGL 111 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l----~~~gd~~~~~vl~~~p~~~~~~~~~---~~~g~~~ 111 (360)
+++|+.++++++. ++++|++|+|+|++++.++..+ .++|++ |+++...|+++...+ +..|+++
T Consensus 46 ~~~r~~la~~~g~------~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~----vl~~~~~h~s~~~~~~~~~~~g~~v 115 (364)
T PLN02651 46 EKARAQVAALIGA------DPKEIIFTSGATESNNLAIKGVMHFYKDKKKH----VITTQTEHKCVLDSCRHLQQEGFEV 115 (364)
T ss_pred HHHHHHHHHHhCC------CCCeEEEeCCHHHHHHHHHHHHHHhccCCCCE----EEEcccccHHHHHHHHHHHhcCCEE
Confidence 7889999999986 5568999999999988877665 466887 999998887765443 3468898
Q ss_pred eeecCCccc-cc-----c--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEE
Q 018172 112 YKWDGDANT-FD-----K--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIML 182 (360)
Q Consensus 112 ~~~~~~~~~-~~-----~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~ 182 (360)
+.++.+.++ ++ . +++++++++++++||||...+ +++.++|+++|+++++|.+++.+..+......+.++++
T Consensus 116 ~~v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~ 195 (364)
T PLN02651 116 TYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMS 195 (364)
T ss_pred EEEccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccCCCCEEE
Confidence 888775432 11 1 467999999999999999998 67788888899999999999977666556677889999
Q ss_pred eccccccCCCCceEEEEeecCHHHHHHHHHHH-------hhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHH
Q 018172 183 FTLSKCTGHAGSRIGWALVKDTEVARKMTRFI-------ELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERW 255 (360)
Q Consensus 183 ~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 255 (360)
.|.+|.+|++| +|+++. .++..+.+.... .....+.|.....++.++++.+. ...++.+++.++.+
T Consensus 196 ~s~hK~~gp~G--~g~l~v-~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~----~~~~~i~~~~~~l~ 268 (364)
T PLN02651 196 ISGHKIYGPKG--VGALYV-RRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAM----KEMDYDEKHMKALR 268 (364)
T ss_pred echhhhCCCCc--eEEEEE-cCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHH----HhHHHHHHHHHHHH
Confidence 99999655445 888887 444333332211 12344577777777777887654 34588889999999
Q ss_pred HHHHHHHHh-cCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCCCCC-----------
Q 018172 256 NMLRQVIRQ-SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRRFGA----------- 321 (360)
Q Consensus 256 ~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~f~~----------- 321 (360)
+++.+.|.+ ++++.+..|.... ...+..+.+.+++ .+.+...|.+ |.++.|+.+..
T Consensus 269 ~~l~~~l~~~~~~~~i~~~~~~~--------~~~~~i~~~~~~~~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~ 338 (364)
T PLN02651 269 ERLLNGLRAKLGGVRVNGPRDPE--------KRYPGTLNLSFAYVEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRA 338 (364)
T ss_pred HHHHHHHHhhCCCEEEECCCCcc--------cCcCCEEEEEeCCCCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHH
Confidence 999999975 5666665442100 0112234444443 3777777765 99988874421
Q ss_pred -------CCCeEEEEecC--ChHHHH
Q 018172 322 -------DAKYARVSMLS--REEIFN 338 (360)
Q Consensus 322 -------~~~~~R~s~~~--~~e~~~ 338 (360)
..+.+|+|++. ++||++
T Consensus 339 ~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 339 LGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred cCCChHHhCceEEEEcCCCCCHHHcC
Confidence 13689999977 777764
No 189
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.90 E-value=7.7e-23 Score=190.04 Aligned_cols=272 Identities=14% Similarity=0.089 Sum_probs=194.6
Q ss_pred cccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcC------------CCCCCCceEEE
Q 018172 26 YLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSS------------PGGPEPISVVS 92 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~------------~gd~~~~~vl~ 92 (360)
.|....+. .++++++++++. ..|.+. ++.++++|+|+|+++..++.++.. +++ +..|++
T Consensus 29 ~y~~~~~~-----~~le~~~~~~~~~~~g~~~-~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~--~~~v~~ 100 (345)
T cd06450 29 TWDESPAA-----TEMEAEVVNWLAKLFGLPS-EDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGID--KLVIVC 100 (345)
T ss_pred ccccCchh-----HHHHHHHHHHHHHHhCCCC-CCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccC--CeEEEE
Confidence 37766666 899999888764 224432 234799999999999999888743 222 124899
Q ss_pred eCCCCCCcHHHHHHhCCeeeeecCCccc-ccc-------CC------CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcE
Q 018172 93 AAPYYSQYPAETDYLRSGLYKWDGDANT-FDK-------NN------GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGK 157 (360)
Q Consensus 93 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~-------~~------~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~ 157 (360)
++++|.++...++.+|.+++.++.+.++ ++. ++ +++++++++|+||||...+ +++.++|+++|++
T Consensus 101 ~~~~h~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~ 180 (345)
T cd06450 101 SDQAHVSVEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLW 180 (345)
T ss_pred cCcchhHHHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCe
Confidence 9999999999999899999999876542 221 23 6788999999999999977 6788889989999
Q ss_pred EEEeecccCCCCCcC------CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHH
Q 018172 158 LIHDLAYYWPQYTPI------TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAK 231 (360)
Q Consensus 158 li~D~ay~~~~~~~~------~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 231 (360)
+++|++|..+..+.. ....+.+.+..|+||.++ ++.++|+++. + ...+.++..
T Consensus 181 l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~-~-------------------~~~~~~~l~ 239 (345)
T cd06450 181 LHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGL-VPLGCSAVLV-R-------------------ALKLWATLR 239 (345)
T ss_pred EEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhC-CCcchHHHHH-H-------------------HHHHHHHHH
Confidence 999999986433211 112345678889999766 6678888776 2 233333333
Q ss_pred HhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-------hHHHHH
Q 018172 232 ILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-------DEDCEK 304 (360)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 304 (360)
.+. . ..+++.++++.++++++.+.|++++++.+..+. ..+++.+.++. ..++.+
T Consensus 240 ~l~---~---~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-------------~~~iv~f~~~~~~~~~~~~~~i~~ 300 (345)
T cd06450 240 RFG---R---DGYGEHIDRIVDLAKYLAELIRADPGFELLGEP-------------NLSLVCFRLKPSVKLDELNYDLSD 300 (345)
T ss_pred HHh---H---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-------------ceeEEEEEECCcchhhHHHHHHHH
Confidence 332 1 667888889999999999999998766543321 11233444433 167788
Q ss_pred HHHhhCeeeeCCCCCCCCCCeEEEEecC---ChHHHHHHHHHHHH
Q 018172 305 LLRAERIMARGGRRFGADAKYARVSMLS---REEIFNIFLERLSA 346 (360)
Q Consensus 305 ~l~~~gI~~~pg~~f~~~~~~~R~s~~~---~~e~~~~~~~~l~~ 346 (360)
.|.++|+.+.++..+. .++++|+++.. ++|++++++++|++
T Consensus 301 ~L~~~g~~~~~~~~~~-~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 301 RLNERGGWHVPATTLG-GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred HHHhcCCEEEEeeEEC-CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 8888877766655554 36799999964 78999999999875
No 190
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.90 E-value=7.7e-23 Score=190.64 Aligned_cols=276 Identities=15% Similarity=0.084 Sum_probs=192.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCC-ceEEEeCCCCCCcHHH---HHHhCCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEP-ISVVSAAPYYSQYPAE---TDYLRSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~-~~vl~~~p~~~~~~~~---~~~~g~~~~~~ 114 (360)
+++|+.++++++. ++++|++|+|+|++++.++..+..+++..+ ..|+++...|+.+... ++..|++++.+
T Consensus 45 ~~~r~~la~~~g~------~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v 118 (353)
T TIGR03235 45 ERARKQVAEALGA------DTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYL 118 (353)
T ss_pred HHHHHHHHHHhCC------CCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEE
Confidence 7899999999986 556899999999999999888864221111 2388888878766544 44469999988
Q ss_pred cCCccc-cc-----c--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecc
Q 018172 115 DGDANT-FD-----K--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTL 185 (360)
Q Consensus 115 ~~~~~~-~~-----~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~ 185 (360)
+.+.++ ++ . ++++++|++++++||||.+++ +.+.++|+++|+++++|++++.+..+......+.++++.|+
T Consensus 119 ~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~ 198 (353)
T TIGR03235 119 PVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSG 198 (353)
T ss_pred ccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccccccCCCEEEeeh
Confidence 876432 22 1 357899999999999999998 67788888899999999998876555444556789999999
Q ss_pred ccccCCCCceEEEEeecCHHHHHH--HHHH-------HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHH
Q 018172 186 SKCTGHAGSRIGWALVKDTEVARK--MTRF-------IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWN 256 (360)
Q Consensus 186 sK~~~~~G~r~G~~~~~~~~~~~~--l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 256 (360)
+|.+|++| +|+++. .++.... +... ......+.+.....++.++++.+. ..+++.+++++++++
T Consensus 199 ~K~~gp~g--~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~----~~~~~~~~~~~~l~~ 271 (353)
T TIGR03235 199 HKIYGPKG--IGALVI-RKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIAR----RNAQAWEVKLRAMRN 271 (353)
T ss_pred hhcCCCCc--eEEEEE-ccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHH----hhHHHHHHHHHHHHH
Confidence 99888667 888888 4443211 1110 011233455666666666776432 457788899999999
Q ss_pred HHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCCCCCC---CCeEEEEec
Q 018172 257 MLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRRFGAD---AKYARVSML 331 (360)
Q Consensus 257 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~f~~~---~~~~R~s~~ 331 (360)
++++.|++ .++.+..+.... .+.++.+.+++ .+++...|++ +|.+.+|..|+.. +.++|.+++
T Consensus 272 ~l~~~l~~-~g~~~~~~~~~~----------~~~i~~~~~~~~~~~~v~~~L~~-~i~v~~g~~~~~~~~~~~~~l~~~g 339 (353)
T TIGR03235 272 QLRDALQT-LGVKLNGDPAET----------IPHILNFSIDGVNSEALIVNLRA-DAAVSTGSACSSSKYEPSHVLQAMG 339 (353)
T ss_pred HHHHHhcc-CCeEEeCCcccc----------cCCEEEEEeCCcCHHHHHHHHhC-CeEEEchhhcCCCCCCCCHHHHHcC
Confidence 99999987 455554322111 11123333333 3788888865 9999999988542 346788887
Q ss_pred CChHHHHH
Q 018172 332 SREEIFNI 339 (360)
Q Consensus 332 ~~~e~~~~ 339 (360)
.+++++..
T Consensus 340 ~~~~~~~~ 347 (353)
T TIGR03235 340 LDTDRARG 347 (353)
T ss_pred CCHHHhCc
Confidence 66655543
No 191
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=3.3e-21 Score=179.88 Aligned_cols=237 Identities=12% Similarity=0.056 Sum_probs=175.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH----HHhCCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET----DYLRSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~----~~~g~~~~~~ 114 (360)
.+||++++++.+. +++++++|+++++..++.+++++||+ |++++|.|.++...+ ...|.++..+
T Consensus 64 ~~Le~~iA~le~~--------~~~~~~~sG~~Ai~~~l~all~~GD~----Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v 131 (394)
T PRK09028 64 FAFQAAIVELEGG--------AGTALYPSGAAAISNALLSFLKAGDH----LLMVDSCYEPTRDLCDKILKGFGIETTYY 131 (394)
T ss_pred HHHHHHHHHHhCC--------CcEEEECCHHHHHHHHHHHHhCCCCE----EEEECCCcHHHHHHHHHhhhhcceEEEEE
Confidence 7999999999763 36899999999999999999999998 999999998887644 4568888887
Q ss_pred cCCc-ccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc-
Q 018172 115 DGDA-NTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT- 189 (360)
Q Consensus 115 ~~~~-~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~- 189 (360)
+.+. +.+.. +++||+|++++|+||||.+.+ +.+.++|+++|+++++|++|..+. ...+...+.++++.|.+|.+
T Consensus 132 ~~~~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~-~~~Pl~~GaDivv~S~tK~l~ 210 (394)
T PRK09028 132 DPMIGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPI-NSRPFEMGVDISIQAATKYIV 210 (394)
T ss_pred CCCCHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccc-cCCccccCceEEEEeCCeEec
Confidence 6432 33433 578999999999999999988 777888888999999999998642 23334678899999999988
Q ss_pred CCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 018172 190 GHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFG 269 (360)
Q Consensus 190 ~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 269 (360)
|..+.-.|+++. ++++.+.+...+...+.+.++.....+...++ -+.-..++..++...+.+.|++++.+.
T Consensus 211 Gh~d~~~G~~~~-~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~--------TL~lR~~~~~~na~~la~~L~~~p~v~ 281 (394)
T PRK09028 211 GHSDVMLGTATA-NEKHWDQLREHSYLMGQCTSPDDVYLAMRGLR--------TLGVRLAQHEKNALKVANWLATRPEVD 281 (394)
T ss_pred CCCCEEEEEEEC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHcccC--------cHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 555677787765 77787878766665666777777766655444 244555556777788999999998765
Q ss_pred cCCCCCcc----cccccccCCCCCCcccccCC
Q 018172 270 LPEYPLEY----CNFTGKFTNSHPGFAWLESK 297 (360)
Q Consensus 270 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 297 (360)
.+.++|.. +........+.+..+.+.++
T Consensus 282 ~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 313 (394)
T PRK09028 282 HVRHPAFETCPGHEFFKRDFSGSNGLFSFVLK 313 (394)
T ss_pred EEECCCCCCCccHHHHHHhccCCCceEEEEEC
Confidence 54444321 11111112234556777776
No 192
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.90 E-value=1.6e-21 Score=184.82 Aligned_cols=282 Identities=15% Similarity=0.062 Sum_probs=189.7
Q ss_pred CCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcC-ChHHHHHHHHHhhcCC--CCCCCceEEEeCCCCCCcHHHHH
Q 018172 30 MGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGT-GSTQLYQAALYALSSP--GGPEPISVVSAAPYYSQYPAETD 105 (360)
Q Consensus 30 ~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~-G~t~~l~~~~~~l~~~--gd~~~~~vl~~~p~~~~~~~~~~ 105 (360)
..|. +++++++++++.. .|. +.+++++++ |++++...+...+..+ ||. |++++|.|+.+...+.
T Consensus 59 ~~g~-----~~~~~~~~~~la~~~g~---~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~----Vl~~~~~h~~~~~~~~ 126 (398)
T cd00613 59 SQGR-----LQALFELQTMLCELTGM---DVANASLQDEATAAAEAAGLAAIRAYHKRNK----VLVPDSAHPTNPAVAR 126 (398)
T ss_pred hhhH-----HHHHHHHHHHHHHHHCC---CccceeccCchHHHHHHHHHHHHhcccCCCE----EEEcCccCcchHHHHH
Confidence 5676 7888888876542 232 223566666 5445555555666665 887 9999999999999988
Q ss_pred HhC----CeeeeecCCcc------cccc--CCCeeEEEEcCCCCCCcccch--HHHHHHhhhcCcEEEEeecccCCCCCc
Q 018172 106 YLR----SGLYKWDGDAN------TFDK--NNGAYIEVVNSPNNPDGTIRE--AVLAKVNRSAEGKLIHDLAYYWPQYTP 171 (360)
Q Consensus 106 ~~g----~~~~~~~~~~~------~~~~--~~~~~~i~~~~p~NPtG~~~~--~~~~~~~~~~~~~li~D~ay~~~~~~~ 171 (360)
.+| ++++.++.+.+ .+.. ++++++|++++|+ |||.+.+ +.+.++|+++|+++|+|+++.......
T Consensus 127 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~ 205 (398)
T cd00613 127 TRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEEVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLK 205 (398)
T ss_pred HhcccCCcEEEEeccCCCCCcCHHHHHHhcCCCeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCC
Confidence 887 88888876532 2222 4679999999986 8999976 677889999999999999876433333
Q ss_pred CCCCCCccEEEeccccccCCC----CceEEEEeecCHHHHHHHHHH-----------------------------Hhhcc
Q 018172 172 ITGAADHDIMLFTLSKCTGHA----GSRIGWALVKDTEVARKMTRF-----------------------------IELGS 218 (360)
Q Consensus 172 ~~~~~~~~i~~~S~sK~~~~~----G~r~G~~~~~~~~~~~~l~~~-----------------------------~~~~~ 218 (360)
..+..+.++++.|+||.+ .| |+++||++. ++++++.+... .....
T Consensus 206 ~~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~ 283 (398)
T cd00613 206 PPGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAV-KKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNI 283 (398)
T ss_pred ChHHcCCCEEEeeccccC-CCCCCCCCceeEEEE-hhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccc
Confidence 334567899999999988 45 789999998 67777664110 00001
Q ss_pred ccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc
Q 018172 219 IGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE 298 (360)
Q Consensus 219 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (360)
.+.+.....++...+..+. +..+++++++++++++++.+.|+++++.. .+.+..+ ..++++++.
T Consensus 284 ~~~~~~~~~~a~~~l~~~~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~--~~~~~~~-----------~~v~~~~~~ 347 (398)
T cd00613 284 CTGQALLALMAAMYIVYLG---PEGLKEIAERAHLNANYLAKRLKEVGGVL--PFNGPFF-----------HEFVLRLPP 347 (398)
T ss_pred eecHHHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHHHhcCCcc--cCCCCee-----------EEEEEEcCC
Confidence 1222233333333333222 26788899999999999999999986543 1222211 013455542
Q ss_pred -----hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC--ChHHHHHHHHHH
Q 018172 299 -----DEDCEKLLRAERIMARGGRRFGADAKYARVSMLS--REEIFNIFLERL 344 (360)
Q Consensus 299 -----~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~--~~e~~~~~~~~l 344 (360)
...+.+.|.++||.+.... . ...+.+|+|+.. ++||+++++++|
T Consensus 348 ~~~~~~~~~~~~L~~~gi~~~~~~-~-~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 348 LYGIRAEDLAKALIDGGFHAPTMY-L-PVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred cchHHHHHHHHhhhhcCccccccc-c-CCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 2667777888999865421 1 125689999855 899999998864
No 193
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.89 E-value=1.1e-21 Score=185.52 Aligned_cols=262 Identities=11% Similarity=0.064 Sum_probs=178.4
Q ss_pred CcEEEcCChHHHHHHHHHhhcC---------CCCCCCceEEEeCCCCCCcH-HHHHHhCCe------------eeeecC-
Q 018172 60 RHIVIGTGSTQLYQAALYALSS---------PGGPEPISVVSAAPYYSQYP-AETDYLRSG------------LYKWDG- 116 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~---------~gd~~~~~vl~~~p~~~~~~-~~~~~~g~~------------~~~~~~- 116 (360)
+.+++++++++++..+++.+.. +|.. +|+..+-+|.... ..+...+.. +..++.
T Consensus 98 ~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~---~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (396)
T PRK04073 98 DMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKA---EIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYG 174 (396)
T ss_pred CeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCC---EEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCC
Confidence 4799999999999998887632 2322 3777766666544 433333211 122221
Q ss_pred Ccccccc--CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCc--CC-CCCCccEEEeccc
Q 018172 117 DANTFDK--NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTP--IT-GAADHDIMLFTLS 186 (360)
Q Consensus 117 ~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~--~~-~~~~~~i~~~S~s 186 (360)
|.+.+.. ++++++|+++.++||||.+++ +.+.++|+++|+++|+||+|.+..... .. ...+...-+.++|
T Consensus 175 d~~~l~~~i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~s 254 (396)
T PRK04073 175 DLEALKAAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYILG 254 (396)
T ss_pred CHHHHHHhcccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEec
Confidence 2222322 357889999999999999987 356788999999999999998432111 11 1122222244689
Q ss_pred cccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 018172 187 KCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSG 266 (360)
Q Consensus 187 K~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 266 (360)
|.+|.+|+|+||+++ ++++++.+.......+++.|++.|.++.++|+.+.+. ...++.+++++++.+.|+++.
T Consensus 255 K~lg~gg~~ig~~~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~------~l~~~~~~~~~~l~~~L~~l~ 327 (396)
T PRK04073 255 KALGGGVFPISCVAA-NRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEE------KLPERSLELGEYFKEQLKEID 327 (396)
T ss_pred ccccCCCCcceEEEE-cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhc------CHHHHHHHHHHHHHHHHHhhc
Confidence 999988899999998 8999988866545567788999999999988754322 234555667888888888763
Q ss_pred CcccCCCCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEe--cCChHHHHHHHHH
Q 018172 267 VFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRFGADAKYARVSM--LSREEIFNIFLER 343 (360)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~--~~~~e~~~~~~~~ 343 (360)
...+. ..++.++|++++++.. ..+.+.|.++||.+.+. .++++||+. ..++|++++++++
T Consensus 328 ~~~i~------------~~~~~g~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----~~~~iRi~p~l~~t~e~i~~~~~~ 390 (396)
T PRK04073 328 NPMIK------------EVRGRGLFIGVELNEPARPYCEALKEEGLLCKET-----HETVIRFAPPLVITKEELDWAFEK 390 (396)
T ss_pred CCccc------------ceecceEEEEEEecchHHHHHHHHHHCCeEEecC-----CCCEEEEECCcccCHHHHHHHHHH
Confidence 11111 1123455777777544 66677788899999863 246999995 4599999999999
Q ss_pred HHHHH
Q 018172 344 LSAIQ 348 (360)
Q Consensus 344 l~~~~ 348 (360)
|++++
T Consensus 391 l~~~l 395 (396)
T PRK04073 391 IKAVL 395 (396)
T ss_pred HHHHh
Confidence 99876
No 194
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.89 E-value=1.5e-21 Score=183.11 Aligned_cols=277 Identities=17% Similarity=0.132 Sum_probs=208.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCC-CcEEEcCChHHHHHHHHHhh---cCCCCCCCceEEEeCCCCCCcHHH----HHHhCCe
Q 018172 39 PELAEAINNLHHVVDNAVSDG-RHIVIGTGSTQLYQAALYAL---SSPGGPEPISVVSAAPYYSQYPAE----TDYLRSG 110 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~-~~i~~t~G~t~~l~~~~~~l---~~~gd~~~~~vl~~~p~~~~~~~~----~~~~g~~ 110 (360)
+++|+.++++++. ++ ++|++++|+|++++.++.++ +++|++ |++..-.|++.... .+..|.+
T Consensus 46 ~~~r~~la~~lg~------~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~----vl~~~~~~~s~~~~~~~~~~~~g~~ 115 (371)
T PF00266_consen 46 EEAREALAKLLGA------PPDEEVVFTSNGTEALNAVASSLLNPLKPGDE----VLVTSNEHPSNRYPWEEIAKRKGAE 115 (371)
T ss_dssp HHHHHHHHHHHTS------STTEEEEEESSHHHHHHHHHHHHHHHGTTTCE----EEEEESSHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHhcCC------ccccccccccccchhhhhhhhccccccccccc----cccccccccccccccccccccchhh
Confidence 7999999999997 55 78999999999999999999 788998 99999888877733 3456899
Q ss_pred eeeecCCcccc-c-----c--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEE
Q 018172 111 LYKWDGDANTF-D-----K--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIM 181 (360)
Q Consensus 111 ~~~~~~~~~~~-~-----~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~ 181 (360)
+..++.+.++. + . ++++++++++..+|-||...+ +.+.++|+++++++++|.+++.+..+......+.+++
T Consensus 116 v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~ 195 (371)
T PF00266_consen 116 VRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDELGADFL 195 (371)
T ss_dssp EEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTTTESEE
T ss_pred hccccccccchhhhhhhhhhhccccceEEeecccccccEEeeeceehhhhhccCCceeEechhcccccccccccccccee
Confidence 98887654322 1 1 479999999999999999998 7778888889999999999998777666677889999
Q ss_pred EeccccccCCCCceEEEEeecCHHHHHHHHHHHhh---------------------ccccCChHHHHHHHHHhcccCCCc
Q 018172 182 LFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIEL---------------------GSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 182 ~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~---------------------~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
++|.+|.+|++| +|+++. +++.++.++..... ...+.+.+...++..+++.+.
T Consensus 196 ~~s~~Kl~gp~G--~g~l~v-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~--- 269 (371)
T PF00266_consen 196 VFSSHKLGGPPG--LGFLYV-RPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLE--- 269 (371)
T ss_dssp EEESTSTTSSST--EEEEEE-EHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHH---
T ss_pred eecccccCCCCc--hhhhee-hhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhh---
Confidence 999999667676 798888 67888887432211 112455666666666777652
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCC
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRR 318 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~ 318 (360)
+.-+++++++..++.+++.+.|.+++++.+..+.... ..+..+.+.+++ .+.+.+.|.++||.+..|..
T Consensus 270 ~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~---------~~~~i~~~~~~~~~~~~~~~~L~~~~I~~~~G~~ 340 (371)
T PF00266_consen 270 EIGIERIRERIRELAEYLREALEELPGIEVLGPDDEP---------RRPSIVSFNLPGSDADDVVKYLEERGIAVSTGSA 340 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGG---------BGTTEEEEEETTSSHHHHHHHHHHHTEEEEESTT
T ss_pred ccccccchhhhhhHHHHHHhhhhcCCceeEeeecccc---------cccceEEEeecCCCHHHHHHHHhhcCEEEeccCc
Confidence 2678888999999999999999999887775542111 111233444433 38899999999999999765
Q ss_pred CCC-------CCCeEEEEecC--ChHHHHHH
Q 018172 319 FGA-------DAKYARVSMLS--REEIFNIF 340 (360)
Q Consensus 319 f~~-------~~~~~R~s~~~--~~e~~~~~ 340 (360)
... ..+.+|+|+.. ++||++++
T Consensus 341 ~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 341 CAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp TCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred ccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 530 14799999976 89999875
No 195
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.89 E-value=5.4e-21 Score=178.91 Aligned_cols=288 Identities=12% Similarity=0.073 Sum_probs=195.1
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH----HHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE----TDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~----~~~~g~~~~~ 113 (360)
..+|++.++++++. + +++++++++.++..++. ++++||+ |+++.+.|..+... +...|++++.
T Consensus 49 ~~~le~~la~l~g~-------~-~~l~~~sG~~al~~~l~-ll~~Gd~----Vl~~~~~y~~~~~~~~~~~~~~G~~v~~ 115 (378)
T TIGR01329 49 RTALESLLAKLDKA-------D-RAFAFSSGMAALDVITR-LLNNGDE----IIAGDDLYGGTDRLLTQVVPRSGVVVVH 115 (378)
T ss_pred HHHHHHHHHHHhCC-------C-cEEEECCHHHHHHHHHH-HhCCCCE----EEEcCCCchHHHHHHHHHHHHcCcEEEE
Confidence 47899999999884 3 45556666778888776 7899998 99999999987654 4457999999
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC-CcCCCCCCccEEEeccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY-TPITGAADHDIMLFTLSKC 188 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~-~~~~~~~~~~i~~~S~sK~ 188 (360)
++.+ .+.++. ++++++|++++|+||||.+.+ +.+.++|+++|+++|+|++|..+.. .++ ..+.+++++|++|.
T Consensus 116 vd~~d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~~~l--~~g~Di~v~S~tK~ 193 (378)
T TIGR01329 116 VDTTDLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLCNPL--ELGADIVYHSATKF 193 (378)
T ss_pred eCCCCHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh--hcCCcEEEEeccee
Confidence 8864 344433 578999999999999999998 6778888889999999999865432 222 34668999999997
Q ss_pred cCC-CCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018172 189 TGH-AGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGV 267 (360)
Q Consensus 189 ~~~-~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 267 (360)
++- .+.+.|+++++++++.+.+...+...+.+.++.....+ +..+ +.+....++-.++...+.+.|++++.
T Consensus 194 l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~---~~~l-----~tl~~R~e~~~~na~~la~~L~~~~~ 265 (378)
T TIGR01329 194 LAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLL---LRGI-----KTLAIRIEKQQENARAIAMFLSTHPR 265 (378)
T ss_pred ccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHH---HccC-----CCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 753 45788999886677778887766644555555544332 2221 34555566667777788888888876
Q ss_pred cccCCCCCcc----cccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCC---------------------
Q 018172 268 FGLPEYPLEY----CNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRF--------------------- 319 (360)
Q Consensus 268 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f--------------------- 319 (360)
+..+.+++-. +..........+..+.+.+.+. ..+.+.|+..+|.++-|...
T Consensus 266 v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~ 345 (378)
T TIGR01329 266 VKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREE 345 (378)
T ss_pred ccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHh
Confidence 5433332211 1111111123444667777442 46677777778777766432
Q ss_pred -CCCCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 320 -GADAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 320 -~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
|..++.+|||++.+ +.+.+++.|++.+++
T Consensus 346 ~gi~~~liR~svGlE--~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 346 RGLPEDLVRLSVGIE--DVDDLISDLDIAFVT 375 (378)
T ss_pred cCCCCCeEEEEeccC--CHHHHHHHHHHHHHh
Confidence 12356899999662 344556666666553
No 196
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.89 E-value=4.3e-21 Score=181.99 Aligned_cols=152 Identities=20% Similarity=0.208 Sum_probs=123.8
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH----HHHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP----AETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~----~~~~~~g~~~~~ 113 (360)
..+|++++++++|. + ..++++++++++..++..++++||+ |+++.+.|+... ..++..|++++.
T Consensus 59 ~~~le~~lA~l~g~-------~-~~v~~~sG~~Ai~~al~~l~~~Gd~----Vl~~~~~y~~t~~~~~~~~~~~G~~v~~ 126 (418)
T TIGR01326 59 TDVLEQRIAALEGG-------V-AALAVASGQAAITYAILNLAQAGDN----IVSSSYLYGGTYNLFKHTLKRLGIEVRF 126 (418)
T ss_pred HHHHHHHHHHHhCC-------C-eEEEEccHHHHHHHHHHHHhCCCCE----EEEECCCcHHHHHHHHHHHHHcCcEEEE
Confidence 48999999999984 3 5788888899999999999999998 999999987654 345668999998
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+ .+.+.. ++++++|++++|+||||.+.+ +.+.++|+++|+++|+|++|..+. ...+...+.++++.|+||.+
T Consensus 127 v~~~d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~-~~~~l~~g~Divv~S~sK~l 205 (418)
T TIGR01326 127 VDPDDPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPY-LCRPIDHGADIVVHSATKYI 205 (418)
T ss_pred ECCCCHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhh-cCCchhcCCeEEEECccccc
Confidence 8753 233332 467899999999999999988 678888999999999999997542 11222356899999999999
Q ss_pred CCCCceEEEEeec
Q 018172 190 GHAGSRIGWALVK 202 (360)
Q Consensus 190 ~~~G~r~G~~~~~ 202 (360)
+.+|+|+||++++
T Consensus 206 ~g~G~~lGg~v~~ 218 (418)
T TIGR01326 206 GGHGTAIGGVIVD 218 (418)
T ss_pred cCCccceEEEEEe
Confidence 9899999999984
No 197
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.89 E-value=1.3e-20 Score=175.23 Aligned_cols=211 Identities=15% Similarity=0.137 Sum_probs=157.2
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHh----CCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYL----RSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~----g~~~~~ 113 (360)
..+|+++++++.+. +++++++|+++++.+++ .++++||+ |+++.+.|......+... +.+ ..
T Consensus 56 ~~~le~~lA~leg~--------~~~v~~~sG~aAi~~~l-~~l~~GD~----VI~~~~~yg~~~~~~~~~~~~~~~~-~~ 121 (364)
T PRK07269 56 RAKLEETLAAIESA--------DYALATSSGMSAIVLAF-SVFPVGSK----VVAVRDLYGGSFRWFNQQEKEGRFH-FT 121 (364)
T ss_pred HHHHHHHHHHHhCC--------CeEEEeCCHHHHHHHHH-HHhCCCCE----EEEecCCcCchHHHHHHHHhcCcEE-EE
Confidence 48999999999983 47999999999999988 46789998 999999999887655443 222 23
Q ss_pred ecCCcccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccccccC
Q 018172 114 WDGDANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCTG 190 (360)
Q Consensus 114 ~~~~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~~ 190 (360)
+..|.+.+.. +++||+|++++|+||||.+.+ +.+.++|+++|+++|+|++|..+.. ..+-..+.+++++|++|.++
T Consensus 122 ~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~-~~pl~~gaDivv~S~tK~l~ 200 (364)
T PRK07269 122 YANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIY-QRPIELGADIVLHSATKYLS 200 (364)
T ss_pred ecCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-CCchhhCCcEEEecCceecc
Confidence 4455555543 568999999999999999988 7778888889999999999875322 12224567899999999987
Q ss_pred CCCc-eEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 018172 191 HAGS-RIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFG 269 (360)
Q Consensus 191 ~~G~-r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 269 (360)
-.|- =.|++++.++++.+.++..+...+...+++....+...|+ .++...++.+++...+.+.|++++.+.
T Consensus 201 g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~--------tL~~r~~~~~~na~~~a~~L~~~p~v~ 272 (364)
T PRK07269 201 GHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLK--------TLSLRMERSTANAQEVVAFLKKSPAVK 272 (364)
T ss_pred CCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC--------cHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 3332 3578887678888888766655555666666665555443 355666666888888889999887654
Q ss_pred cC
Q 018172 270 LP 271 (360)
Q Consensus 270 ~~ 271 (360)
..
T Consensus 273 ~v 274 (364)
T PRK07269 273 EV 274 (364)
T ss_pred EE
Confidence 43
No 198
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.89 E-value=1.2e-20 Score=175.92 Aligned_cols=286 Identities=12% Similarity=0.022 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH----HHhCCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET----DYLRSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~----~~~g~~~~~~ 114 (360)
..|+++++++.+. +++++++|+++++..++..++++||+ |++++|.|.+....+ +..|+++..+
T Consensus 53 ~~lE~~lA~l~g~--------~~~~~~~sG~~Ai~~al~all~~GD~----Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~ 120 (377)
T TIGR01324 53 FALQDAMCELEGG--------AGCYLYPSGLAAVTNSILAFVKAGDH----VLMVDSAYEPTRYFCDIVLKRMGVDITYY 120 (377)
T ss_pred HHHHHHHHHHhCC--------CcEEEECcHHHHHHHHHHHhcCCCCE----EEEcCCCcHHHHHHHHHHHHhcCcEEEEE
Confidence 6999999999984 36899999999999999999999998 999999998876543 4568888877
Q ss_pred cCCc-ccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccccccC
Q 018172 115 DGDA-NTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCTG 190 (360)
Q Consensus 115 ~~~~-~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~~ 190 (360)
+.+. +.+.. ++++|+|++++|+||+|...+ +.+.++|+++|+++|+|++|..+... .+...+.+++++|++|.++
T Consensus 121 d~~~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~-~pl~~gaDivv~S~tK~l~ 199 (377)
T TIGR01324 121 DPLIGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLF-KPLEHGVDISIQAGTKYLV 199 (377)
T ss_pred CCCCHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcccccc-CccccCceEEEecCceecc
Confidence 5432 33432 578999999999999999988 77888898899999999999865321 2335678899999999986
Q ss_pred -CCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 018172 191 -HAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFG 269 (360)
Q Consensus 191 -~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 269 (360)
..+...|++++ +++..+.+.......+.+.++.....+...+ +.+....++..++...+.+.|.+++.+.
T Consensus 200 G~~d~~gG~v~~-~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl--------~tl~~R~~~~~~~a~~la~~L~~~p~v~ 270 (377)
T TIGR01324 200 GHSDIMIGTVVA-NARTWDQLREHSYLMGQMVDADDAYTTLRGL--------RTLGVRLKQHQESSLAIAKWLSEQPEVA 270 (377)
T ss_pred CCCCceEEEEEe-CHHHHHHHHHHHHHhCCCCCHHHHHHHHhhh--------hhHHHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 34567888887 7777777775544445555664444443333 2334445555666677888999887665
Q ss_pred cCCCCCcc----cccccccCCCCCCcccccCCc-h----HHHHHHHHhhCeeeeCCCCC------------------CCC
Q 018172 270 LPEYPLEY----CNFTGKFTNSHPGFAWLESKE-D----EDCEKLLRAERIMARGGRRF------------------GAD 322 (360)
Q Consensus 270 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~l~~~gI~~~pg~~f------------------~~~ 322 (360)
.+.+++.. +........+.+..+.+.+++ . ..+.+.|+-.++.+.-|... +..
T Consensus 271 ~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~ 350 (377)
T TIGR01324 271 RVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWGGYESLALCNQPELGHRPNIKRNLE 350 (377)
T ss_pred EEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCCCccceeecCCCCCCHHHHHhccCC
Confidence 44444311 111111112334556777754 2 33444444434443222211 112
Q ss_pred CCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 323 AKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 323 ~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
++.+|||++.+ +.+.+++.|.+.+
T Consensus 351 ~~liR~svGlE--~~~dl~~dl~~al 374 (377)
T TIGR01324 351 GPLIRVHIGLE--NVDDLKADLKAGF 374 (377)
T ss_pred CCEEEEEeCCC--CHHHHHHHHHHHH
Confidence 35799999762 2334444444444
No 199
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.89 E-value=1.4e-20 Score=179.35 Aligned_cols=276 Identities=14% Similarity=0.124 Sum_probs=185.2
Q ss_pred HHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH-----HHHhCCeeeeecC
Q 018172 42 AEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE-----TDYLRSGLYKWDG 116 (360)
Q Consensus 42 r~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~-----~~~~g~~~~~~~~ 116 (360)
|+.++++++. +..+|++++| ++++..++.+++++||+ |+++.|+|..+... +...|++++.++.
T Consensus 77 ~~~la~~~g~------~~~~i~~~sg-t~al~~~l~~l~~~gd~----Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 145 (416)
T PRK00011 77 IDRAKELFGA------EYANVQPHSG-SQANAAVYFALLKPGDT----ILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGV 145 (416)
T ss_pred HHHHHHHhCC------CceeeecCCc-hHHHHHHHHHhcCCCCE----EEEeccccCCccccccccccccceeeEeecCc
Confidence 3467788885 3435666665 77999999999999998 99999999865321 2334677777766
Q ss_pred Ccc--cccc--------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC-----CcCCCCCCccE
Q 018172 117 DAN--TFDK--------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY-----TPITGAADHDI 180 (360)
Q Consensus 117 ~~~--~~~~--------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~-----~~~~~~~~~~i 180 (360)
+.+ .++. +.++++|++++++|| ...+ +.+.++|+++|+++|+|++|..+.. +.... ..++
T Consensus 146 ~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~~~--~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~di 221 (416)
T PRK00011 146 DEETGLIDYDEVEKLALEHKPKLIIAGASAYS--RPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HADV 221 (416)
T ss_pred CcccCCcCHHHHHHHHHhcCCCEEEECCCcCC--CccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CCcE
Confidence 532 2211 236889988766655 3444 5677888889999999999864221 11112 4578
Q ss_pred EEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChH-HHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHH
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKE-SQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLR 259 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 259 (360)
+++|+||.+ +|.|.||++++++++.+.+.........+.+.. .+.++..++.... ...+++.+++++++++++.
T Consensus 222 ~~~S~~K~l--~g~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~---~~~~~~~~~~~~~~~~~l~ 296 (416)
T PRK00011 222 VTTTTHKTL--RGPRGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEAL---EPEFKEYAQQVVKNAKALA 296 (416)
T ss_pred EEecCCcCC--CCCCceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHH
Confidence 999999976 678889999955789998877664433333322 2222222232111 1457888899999999999
Q ss_pred HHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHHhhCeeeeCCC-CCC----CCCCeEEEEe
Q 018172 260 QVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLRAERIMARGGR-RFG----ADAKYARVSM 330 (360)
Q Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gI~~~pg~-~f~----~~~~~~R~s~ 330 (360)
+.|++.+ +.+.. .+ ..++++|+.+++ ...+.+.|+++||.+..+. .+. ..+..+|++.
T Consensus 297 ~~L~~~g-~~~~~-~~-----------~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~ 363 (416)
T PRK00011 297 EALAERG-FRVVS-GG-----------TDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGT 363 (416)
T ss_pred HHHHhCC-Ceeee-cC-----------CCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecC
Confidence 9999874 43321 11 123477887752 2678888999999997432 121 1245799964
Q ss_pred ------cCChHHHHHHHHHHHHHHhc
Q 018172 331 ------LSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 331 ------~~~~e~~~~~~~~l~~~~~~ 350 (360)
..+++++++++++|++++..
T Consensus 364 ~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 364 PAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred HHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 22689999999999998876
No 200
>PRK05939 hypothetical protein; Provisional
Probab=99.88 E-value=1.4e-20 Score=176.69 Aligned_cols=287 Identities=15% Similarity=0.107 Sum_probs=187.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH---HHHHhCCeeeeec
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA---ETDYLRSGLYKWD 115 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~---~~~~~g~~~~~~~ 115 (360)
.+|+++++++.+. ++.+++++| ++++..++..++++||+ |+++++.|+.... .++..|++++.++
T Consensus 50 ~~lE~~la~leg~-------~~~v~~ssG-~~Ai~~~l~all~~Gd~----Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~ 117 (397)
T PRK05939 50 AALEAKITKMEGG-------VGTVCFATG-MAAIAAVFLTLLRAGDH----LVSSQFLFGNTNSLFGTLRGLGVEVTMVD 117 (397)
T ss_pred HHHHHHHHHHhCC-------CeEEEeCCH-HHHHHHHHHHHcCCCCE----EEECCCccccHHHHHHHHHhcCCEEEEEC
Confidence 5999999999984 345555555 89999999999999998 9999999987654 4566799999887
Q ss_pred CC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccccccCC
Q 018172 116 GD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCTGH 191 (360)
Q Consensus 116 ~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~~~ 191 (360)
.+ .+.+.. ++++++|++++|+||||.+.+ +.+.++|+++|+++|+|++|..+.. ..+...+.++++.|+||.++.
T Consensus 118 ~~d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~-~~~~~~gaDivv~S~sK~~~g 196 (397)
T PRK05939 118 ATDVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWL-FRPKDVGASLVINSLSKYIAG 196 (397)
T ss_pred CCCHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccc-cCccccCCEEEEecCeecccC
Confidence 53 444443 578999999999999999988 7788888889999999999874421 122345789999999999998
Q ss_pred CCceEEEEeecCHH--------H-------------HHHHHH-HHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHH
Q 018172 192 AGSRIGWALVKDTE--------V-------------ARKMTR-FIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRR 249 (360)
Q Consensus 192 ~G~r~G~~~~~~~~--------~-------------~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 249 (360)
.|.++|+++..+.. + +..+.. .....+...++.....+...++ ....++++
T Consensus 197 ~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~-------tl~~R~~~ 269 (397)
T PRK05939 197 HGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGAE-------TLALRVDR 269 (397)
T ss_pred CCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcC-------cHHHHHHH
Confidence 89999998873211 1 111211 1112334455554444433332 44444444
Q ss_pred HHHHHHHHHHHHHHhcCCcccCCCCCcc----cccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCC------
Q 018172 250 LMSERWNMLRQVIRQSGVFGLPEYPLEY----CNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRF------ 319 (360)
Q Consensus 250 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f------ 319 (360)
. .++...+.+.|++++.+..+.+++-. +........+.+..+.+.+++...+.+.+..-.+. ..+..+
T Consensus 270 ~-~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~~~~~~f~~~l~l~-~~~~s~G~~~sl 347 (397)
T PRK05939 270 S-CSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADGIDCFDFLNRLKLV-IKATHLGDTRTL 347 (397)
T ss_pred H-HHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCHHHHHHHHHhCCcc-eEccCCCCCCee
Confidence 4 44777888999999866554444311 11111112345667777886554444444444442 111111
Q ss_pred --------------------CCCCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 320 --------------------GADAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 320 --------------------~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
|..++.+|+|++.+ +.+.+++.|.+.+.
T Consensus 348 ~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGlE--d~~dLi~dl~~Al~ 395 (397)
T PRK05939 348 VIPVAPTIYYEMGAERRASMGIADSLIRVSVGIE--DEADLIADFEQALD 395 (397)
T ss_pred eecCcccccccCCHHHHHhcCCCCCeEEEEeCCC--CHHHHHHHHHHHHh
Confidence 22356899999663 34555666666554
No 201
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.88 E-value=6.1e-21 Score=181.66 Aligned_cols=276 Identities=17% Similarity=0.080 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc--CCCCCCCceEEEeCCCCCCcHHHHHHhC--------
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS--SPGGPEPISVVSAAPYYSQYPAETDYLR-------- 108 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~--~~gd~~~~~vl~~~p~~~~~~~~~~~~g-------- 108 (360)
.++++.++++++. ..+++++++|+++++..++..+. .+++. |++.+++|..........+
T Consensus 82 ~~l~~~l~~~~~~------~~~~v~~~~sgsea~~~al~~~~~~~~~~~----ii~~~~~yhg~~~~~~~~~~~~~~~~~ 151 (413)
T cd00610 82 VELAELLLALTPE------GLDKVFFVNSGTEAVEAALKLARAYTGRKK----IISFEGAYHGRTLGALSLTGSKKYRGG 151 (413)
T ss_pred HHHHHHHHHhCCC------CCCEEEEcCcHHHHHHHHHHHHHHHcCCCe----EEEECCCcCCccHHHHHhcCCcccccc
Confidence 5566666666553 34689999999999999999874 55676 9999999998765544432
Q ss_pred -----CeeeeecCC------------cccccc---C--CCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEe
Q 018172 109 -----SGLYKWDGD------------ANTFDK---N--NGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHD 161 (360)
Q Consensus 109 -----~~~~~~~~~------------~~~~~~---~--~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D 161 (360)
.+++.++.+ .+.+.. . .++++++++..+|++|.+++ +.+.++|+++|+++|+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~D 231 (413)
T cd00610 152 FGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIAD 231 (413)
T ss_pred CCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 123444433 122211 1 24556666555667798764 45678899999999999
Q ss_pred ecccCCCCCc---CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHH--HHHHhhccccCChHHHHHHHHHhccc
Q 018172 162 LAYYWPQYTP---ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKM--TRFIELGSIGVSKESQLRAAKILGIV 236 (360)
Q Consensus 162 ~ay~~~~~~~---~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (360)
|+|.+..... .....+...-+.|+||.++ .|+|+||+++ ++++++.+ .......+.+.+++.+.++.++++.+
T Consensus 232 ev~~g~g~~g~~~~~~~~~~~~d~~t~sK~l~-~g~~~g~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l 309 (413)
T cd00610 232 EVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLG-GGLPLGAVLG-REEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVL 309 (413)
T ss_pred ccccCCCcCcchhhHhhcCCCCCeEEEccccc-CccccEEEEE-cHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 9998531111 1111222223568899999 5899999998 88888886 33333456788889998888888754
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc-ccCCCCCcccccccccCCCCCCcccccCCc-----------hHHHHH
Q 018172 237 SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF-GLPEYPLEYCNFTGKFTNSHPGFAWLESKE-----------DEDCEK 304 (360)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 304 (360)
.+ ++..++++++.+++.+.|+.+... .... ...+.+.++++.+++ ...+.+
T Consensus 310 ~~------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-----------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (413)
T cd00610 310 EE------EGLLENAAELGEYLRERLRELAEKHPLVG-----------DVRGRGLMIGIELVKDRATKPPDKELAAKIIK 372 (413)
T ss_pred Hh------ccHHHHHHHHHHHHHHHHHHHHhhCCcEE-----------EeecCceEEEEEEecCCCcCCcchHHHHHHHH
Confidence 32 245566777777777777665211 1100 011233455665532 155677
Q ss_pred HHHhhCeeeeCCCCCCCCCCeEEEEecC--ChHHHHHHHHHHHHHH
Q 018172 305 LLRAERIMARGGRRFGADAKYARVSMLS--REEIFNIFLERLSAIQ 348 (360)
Q Consensus 305 ~l~~~gI~~~pg~~f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~ 348 (360)
.|.++||.+.|+. .+++|++++. +++++++++++|.+++
T Consensus 373 ~l~~~gv~v~~~~-----~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 373 AALERGLLLRPSG-----GNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred HHHHCCeEEeecC-----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 8889999999964 4689998755 8999999999998764
No 202
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.88 E-value=3.1e-20 Score=173.62 Aligned_cols=252 Identities=15% Similarity=0.133 Sum_probs=171.8
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH----HHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA----ETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~----~~~~~g~~~~~ 113 (360)
..+|++.++++++. ++.+++++| +.++..++ .++++||+ |+++.|+|+.... .+...|++++.
T Consensus 52 ~~~Le~~lA~l~g~-------~~~~~~~sG-~aai~~~~-~~l~~Gd~----Viv~~~~y~~~~~~~~~~~~~~G~~v~~ 118 (377)
T PRK07671 52 RAALEELIAVLEGG-------HAGFAFGSG-MAAITAVM-MLFSSGDH----VILTDDVYGGTYRVMTKVLNRFGIEHTF 118 (377)
T ss_pred HHHHHHHHHHHhCC-------CceEEeCCH-HHHHHHHH-HHhCCCCE----EEECCCccchHHHHHHHHHhcCCeEEEE
Confidence 48999999999984 345666666 56776655 57889998 9999999995544 33446999998
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+ .+.+.. ++++++|++++|+||||.+.+ +.+.++|+++|+++|+|++|..+... .+-..+.+++++|+||.+
T Consensus 119 v~~~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~-~p~~~g~Divv~S~sK~l 197 (377)
T PRK07671 119 VDTSNLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQ-SPISLGADIVLHSATKYL 197 (377)
T ss_pred ECCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccC-ChhhhCCeEEEecCcccc
Confidence 8753 344433 468999999999999999988 67788888899999999999753221 122345689999999999
Q ss_pred CCCC-ceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 190 GHAG-SRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 190 ~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+-++ .-.|++++.++++.+.+...+...+...++.....+...+ +.+....++..++...+.+.|.+++.+
T Consensus 198 ~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l--------~tl~~R~~~~~~na~~la~~L~~~~~v 269 (377)
T PRK07671 198 GGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGL--------KTLGIRMEEHETNSRAIAEFLNNHPAV 269 (377)
T ss_pred cCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCc--------ChHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 7333 3457777767888898888777655555555444443322 335556667778889999999998776
Q ss_pred ccCCCCCcc----cccccccCCCCCCcccccCCchHHHHHHHHhhCe
Q 018172 269 GLPEYPLEY----CNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERI 311 (360)
Q Consensus 269 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI 311 (360)
..+.+++.. +........+.+..+.+++.+.+.+.+.+.+-.+
T Consensus 270 ~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~l 316 (377)
T PRK07671 270 NKVYYPGLPSHPNHELAKEQANGFGGMISFDVGSEETANKVLERLQY 316 (377)
T ss_pred eEEECCCCCCCccHHHHHhhCCCCCceEEEEeCCHHHHHHHHHhCCc
Confidence 555444311 1111111224455677777443444444444443
No 203
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.88 E-value=2.9e-20 Score=173.78 Aligned_cols=280 Identities=16% Similarity=0.167 Sum_probs=184.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
.++++.++++++. +++++|+|+|+++.+++.++ +++||+ |+++.++|..+...+...|++++.++++
T Consensus 34 ~~~e~~la~~~g~--------~~~v~~~sgt~aL~~~l~al~~~pGd~----Viv~~~t~~~~~~~~~~~G~~~v~vd~d 101 (376)
T TIGR02379 34 RRCETWLENRTGT--------KKALLTPSCTAALEMAALLLDIQPGDE----VIMPSYTFVSTANAFVLRGAKIVFVDIR 101 (376)
T ss_pred HHHHHHHHHHhCC--------CeEEEeCCHHHHHHHHHHHcCCCCcCE----EEECCCCcHHHHHHHHHcCCEEEEEecC
Confidence 6777777777663 47999999999999998888 889998 9999999999999999999999999988
Q ss_pred cccccc---------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC-CCcCCCCCCccEEEecc-
Q 018172 118 ANTFDK---------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ-YTPITGAADHDIMLFTL- 185 (360)
Q Consensus 118 ~~~~~~---------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~-~~~~~~~~~~~i~~~S~- 185 (360)
.+++.. ++++++|+ |+||+|...+ +.+.++|+++|+++|+|++|+.+. +....-..-.++.++||
T Consensus 102 ~~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~~~~~~fSf~ 178 (376)
T TIGR02379 102 PDTMNIDETLIESAITHRTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSIGHLGTFSFH 178 (376)
T ss_pred CCcCCCCHHHHHHhcCcCceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCcccCCCCCEEEEeCC
Confidence 665433 35788886 7788999888 678888888999999999998643 21111111113444554
Q ss_pred -ccccCCCCceEEEEeecCHHHHHHHHHHHhhcc-----------------ccCCh-HHHHHHHHHhcccCCCchhHHHH
Q 018172 186 -SKCTGHAGSRIGWALVKDTEVARKMTRFIELGS-----------------IGVSK-ESQLRAAKILGIVSDDYPNFFEY 246 (360)
Q Consensus 186 -sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~-----------------~~~~~-~~~~~~~~~l~~~~~~~~~~~~~ 246 (360)
+|.+. +|.+.|+++++++++.+.++..+..+. .+.|. +.-..|+..+..+ ..+++
T Consensus 179 ~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL-----~~l~~ 252 (376)
T TIGR02379 179 ETKNYT-SGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQL-----EQADR 252 (376)
T ss_pred CCCcCc-ccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHH-----HHhHH
Confidence 37776 777889999977999999988775321 11111 1111122222222 34444
Q ss_pred HHHHHHHHHHHHHHHHHhcC---CcccCC-CCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhhCeeeeCCC--
Q 018172 247 GRRLMSERWNMLRQVIRQSG---VFGLPE-YPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERIMARGGR-- 317 (360)
Q Consensus 247 ~~~~~~~~~~~l~~~l~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~pg~-- 317 (360)
..+.-++..++..+.|..+. ....+. +.+...++ .++++.++. .+.+.+.|+++||.++++.
T Consensus 253 ~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~---------~~~~i~~~~~~~r~~l~~~L~~~gI~~~~~~~p 323 (376)
T TIGR02379 253 INQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNA---------HMFYIKLKDEDDRNELIKYLKEQEIMAVFHYVP 323 (376)
T ss_pred HHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeee---------EEEEEEECCcCCHHHHHHHHHHCCCCccccCcC
Confidence 44444444455666666553 122221 11211111 123455543 3888999999999987432
Q ss_pred --C------CCC-C----------CCeEEEEecC--ChHHHHHHHHHHHHHH
Q 018172 318 --R------FGA-D----------AKYARVSMLS--REEIFNIFLERLSAIQ 348 (360)
Q Consensus 318 --~------f~~-~----------~~~~R~s~~~--~~e~~~~~~~~l~~~~ 348 (360)
. ++. . ...+.+.+.. ++++++..+++|++++
T Consensus 324 ~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 324 LHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred CCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 1 110 0 2246666544 8999999999998865
No 204
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=3e-20 Score=176.05 Aligned_cols=290 Identities=15% Similarity=0.161 Sum_probs=187.6
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH----HHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA----ETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~----~~~~~g~~~~~ 113 (360)
...|++.++++.+. + ..++++|+++++..++..++++||+ |+++.+.|+.... .++..|++++.
T Consensus 66 ~~~Le~~lA~leg~-------~-~al~~~sG~~Ai~~al~~ll~~GD~----Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~ 133 (431)
T PRK08248 66 TDVFEKRIAALEGG-------I-GALAVSSGQAAITYSILNIASAGDE----IVSSSSLYGGTYNLFAHTLPKLGITVKF 133 (431)
T ss_pred HHHHHHHHHHHhCC-------C-cEEEECCHHHHHHHHHHHHhCCCCE----EEEccCchhhHHHHHHHHHHhCCEEEEE
Confidence 48999999999984 3 5778888899999999999999998 9999999976543 45668999998
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+ .+.+.. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+. ...+...+.++++.|++|.+
T Consensus 134 vd~~d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~-~~~pl~~gaDivv~S~tK~l 212 (431)
T PRK08248 134 VDPSDPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPY-LLRPIEHGADIVVHSATKFI 212 (431)
T ss_pred ECCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccc-cCChhHcCCCEEEEcCcccc
Confidence 8754 344433 467999999999999999998 677788888999999999987432 12222568899999999999
Q ss_pred CCCCceEEEEeecCHHH---------------------------------HHHHHHHHhhccccCChHHHHHHHHHhccc
Q 018172 190 GHAGSRIGWALVKDTEV---------------------------------ARKMTRFIELGSIGVSKESQLRAAKILGIV 236 (360)
Q Consensus 190 ~~~G~r~G~~~~~~~~~---------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (360)
+.+|.++|++++.+.+. ...........+...++.....+...+
T Consensus 213 gg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl--- 289 (431)
T PRK08248 213 GGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQGL--- 289 (431)
T ss_pred CCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhcCc---
Confidence 99999999887732211 011111222233444444444333322
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcc----cccccccC-CCCCCcccccCCch-HHHHHHHHhhC
Q 018172 237 SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEY----CNFTGKFT-NSHPGFAWLESKED-EDCEKLLRAER 310 (360)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~~~g 310 (360)
+-+....++-.++...+.+.|++++.+..+.+++.. +....... .+.+..+.+.++++ +.+.+.+.+-.
T Consensus 290 -----~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~ 364 (431)
T PRK08248 290 -----ETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGIKGGVEAGKKLIDSVK 364 (431)
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCC
Confidence 223344455567777899999999877654444321 11111111 23355677887654 44444443333
Q ss_pred eeee---CCC----------------------CCCCCCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 311 IMAR---GGR----------------------RFGADAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 311 I~~~---pg~----------------------~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
+... -|. ..|..++.+|||++.+ +.+.+++.|.+.+++
T Consensus 365 l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE--d~~dL~~Dl~~Al~~ 427 (431)
T PRK08248 365 LFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVGTE--AIDDILDDLRQAIRQ 427 (431)
T ss_pred cceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHh
Confidence 3221 121 0122356899999662 234455555555543
No 205
>PRK05968 hypothetical protein; Provisional
Probab=99.87 E-value=6.1e-20 Score=172.49 Aligned_cols=287 Identities=14% Similarity=0.087 Sum_probs=189.7
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH----HHHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP----AETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~----~~~~~~g~~~~~ 113 (360)
..+|++.+++++|. ++.++++ +++.++..++..++++||+ |+++.+.|.... ..+...|++++.
T Consensus 65 ~~~le~~lA~l~g~-------~~av~~~-sG~~Ai~~al~al~~~Gd~----Vl~~~~~y~~t~~~~~~~~~~~G~~v~~ 132 (389)
T PRK05968 65 VRAFEEMLAKLEGA-------EDARGFA-SGMAAISSTVLSFVEPGDR----IVAVRHVYPDAFRLFETILKRMGVEVDY 132 (389)
T ss_pred HHHHHHHHHHHhCC-------CcEEEEC-CHHHHHHHHHHHHhCCCCE----EEEeCCCchHHHHHHHHHHHHcCceEEE
Confidence 38999999999985 3455554 5568999999889999998 999999998754 455667999988
Q ss_pred ecCC-cccccc-CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC-CCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK-NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ-YTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~-~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~-~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+ .+.+.. -+++++|++.+|+||++...+ +.+.++|+++|+++|+|++|..+. ..++ ..+.++++.|+||.+
T Consensus 133 vd~~d~~~l~~~i~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p~--~~g~Divv~S~tK~l 210 (389)
T PRK05968 133 VDGRDEEAVAKALPGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRPI--TLGVDLVIHSASKYL 210 (389)
T ss_pred eCCCCHHHHHHhcccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCch--hcCCcEEEeeccccc
Confidence 8754 333322 246899999999999998877 677888888999999999997543 2222 345689999999999
Q ss_pred CCCC-ceEEEEeecCHHHHHHHHHHHh-hccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018172 190 GHAG-SRIGWALVKDTEVARKMTRFIE-LGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGV 267 (360)
Q Consensus 190 ~~~G-~r~G~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 267 (360)
+.+| .+.|+++. ++++++.++.... ..+...++..+..+...++ . +....++-.++.+.+.+.|++++.
T Consensus 211 ~g~~~~~gG~i~~-~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~-------t-l~~r~~~~~~~a~~la~~L~~~p~ 281 (389)
T PRK05968 211 GGHSDTVAGVVAG-SKEHIARINAEAYPYLGAKLSPFEAWLLLRGLR-------T-LPLRMKAHEASALEIARRLKAHPV 281 (389)
T ss_pred cCCCCeEEEEEEE-CHHHHHHHHHHHHHhCCCCCChHHHHHHHcccC-------c-HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8654 57898887 7888888876543 2334555555544433333 3 344444445567788889999887
Q ss_pred cccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCC----------------------CCC
Q 018172 268 FGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRF----------------------GAD 322 (360)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f----------------------~~~ 322 (360)
+..+.+++..-. ......+.+..+.+.+++. ..+.+.|+..++.+.-|... |..
T Consensus 282 v~~v~~p~l~~~-~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~ 360 (389)
T PRK05968 282 VERVCHPALANH-PPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQQKAQPNSAARFGVS 360 (389)
T ss_pred ccEEECCCCCCC-hHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeCcccccccCCHHHHHhcCCC
Confidence 765543321100 0000112334566666533 56667777666665544322 223
Q ss_pred CCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 323 AKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 323 ~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
++.+|+|++.. +.+.+++.|++.+.+
T Consensus 361 ~~liR~SvGlE--~~~dl~~dl~~al~~ 386 (389)
T PRK05968 361 PRSVRLHVGLE--GTEALWADLEQALAA 386 (389)
T ss_pred CCeEEEEeccC--CHHHHHHHHHHHHHH
Confidence 57899999662 233445555555443
No 206
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=1.9e-20 Score=176.27 Aligned_cols=291 Identities=14% Similarity=0.127 Sum_probs=194.7
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH----HHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE----TDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~----~~~~g~~~~~ 113 (360)
..+|++.++++.+. . ..++++++++|+.+++.+++++||+ |+++.++|.+.... +...|+++..
T Consensus 63 v~~lE~~la~leg~-------~-~av~~~SG~aAi~~al~all~~GD~----VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~ 130 (432)
T PRK06702 63 LAAFEQKLAELEGG-------V-GAVATASGQAAIMLAVLNICSSGDH----LLCSSTVYGGTFNLFGVSLRKLGIDVTF 130 (432)
T ss_pred HHHHHHHHHHHhCC-------C-cEEEECCHHHHHHHHHHHhcCCCCE----EEECCCchHHHHHHHHHHHHHCCCEEEE
Confidence 48999999999984 3 5788999999999999999999999 99999999977776 6778999998
Q ss_pred ecC--Ccccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccc-
Q 018172 114 WDG--DANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSK- 187 (360)
Q Consensus 114 ~~~--~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK- 187 (360)
++. |.+.++. +++||+|++.+|+||++.+.+ +.+.++|+++|+++|+|++|..+ +..-+-..+.+|++.|+||
T Consensus 131 vd~~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP-~~~~pl~~GADIvv~S~TKy 209 (432)
T PRK06702 131 FNPNLTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATP-YLCQAFEHGANIIVHSTTKY 209 (432)
T ss_pred ECCCCCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCch-hhCChhhcCCCEEEEccccc
Confidence 875 3345543 578999999999999999999 78888899999999999998632 1112236677899999999
Q ss_pred ----ccCCCCceE-----EEEeecCHHHHH---------------------HHH-HHHhhccccCChHHHHHHHHHhccc
Q 018172 188 ----CTGHAGSRI-----GWALVKDTEVAR---------------------KMT-RFIELGSIGVSKESQLRAAKILGIV 236 (360)
Q Consensus 188 ----~~~~~G~r~-----G~~~~~~~~~~~---------------------~l~-~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (360)
..++.|.++ +|...++.++.+ ... ......+.+.+++....+...|+.
T Consensus 210 ~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~T- 288 (432)
T PRK06702 210 IDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLET- 288 (432)
T ss_pred cCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCc-
Confidence 666777776 555442222221 111 122223457777777777665552
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcc----cccccccC-CCCCCcccccCCch-HHHHHHHHhhC
Q 018172 237 SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEY----CNFTGKFT-NSHPGFAWLESKED-EDCEKLLRAER 310 (360)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~~~g 310 (360)
++...++-+++...+.+.|++++.+..+.+++.. +....... .+.+..+.+.++++ +.+.+.+.+-.
T Consensus 289 -------l~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~ 361 (432)
T PRK06702 289 -------LHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIANVK 361 (432)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCc
Confidence 3333344468888999999999877655444321 11111112 23455677887643 44444443333
Q ss_pred eee---e----------CCC------------CCCCCCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 311 IMA---R----------GGR------------RFGADAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 311 I~~---~----------pg~------------~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
+.. . |.. ..|..++.+|||++.+ +.+.+++.|.+.+..-
T Consensus 362 l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGlE--d~eDLi~Dl~~Al~~~ 425 (432)
T PRK06702 362 LATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGIE--DVSDIIADLEAALVGG 425 (432)
T ss_pred cceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHhcC
Confidence 321 1 111 0122356899998663 3455666666666543
No 207
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.87 E-value=5.9e-20 Score=172.39 Aligned_cols=282 Identities=15% Similarity=0.108 Sum_probs=188.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
.+|+++++++++. + ++++++|+|+++++++.++ +++||+ |+++.|+|..+...+...|++++.++++
T Consensus 36 ~~le~~la~~~g~-------~-~~v~~~sgt~al~lal~al~~~~Gd~----Viv~~~~~~~~~~~~~~~G~~~v~vd~~ 103 (379)
T PRK11658 36 QALEQAFCQLTGN-------Q-HAIAVSSATAGMHITLMALGIGPGDE----VITPSLTWVSTLNMIVLLGATPVMVDVD 103 (379)
T ss_pred HHHHHHHHHHhCC-------C-eEEEECCHHHHHHHHHHHcCCCCCCE----EEECCCcHHHHHHHHHHcCCEEEEEecC
Confidence 9999999999995 3 5788899999999999999 799998 9999999999999999999999999887
Q ss_pred cccccc---------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCc--CCCCCCccEEEecc
Q 018172 118 ANTFDK---------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTP--ITGAADHDIMLFTL 185 (360)
Q Consensus 118 ~~~~~~---------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~--~~~~~~~~i~~~S~ 185 (360)
.+++.. ++++++|+ |+||+|...+ +.+.++|+++|+++|+|++|+.+.... ..+..+. .++||
T Consensus 104 ~~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~--~~~Sf 178 (379)
T PRK11658 104 RDTLMVTPEAIEAAITPRTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGT--AIFSF 178 (379)
T ss_pred CCcCCcCHHHHHHhcccCCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCC--EEEeC
Confidence 654322 36788887 7778999987 678888998999999999998543211 1222332 45666
Q ss_pred ccccCCCCceEEEEeecCHHHHHHHHHHHhhccc--------------------cCC-hHHHHHHHHHhcccCCCchhHH
Q 018172 186 SKCTGHAGSRIGWALVKDTEVARKMTRFIELGSI--------------------GVS-KESQLRAAKILGIVSDDYPNFF 244 (360)
Q Consensus 186 sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~--------------------~~~-~~~~~~~~~~l~~~~~~~~~~~ 244 (360)
++...+++.+.|++++.++++.+.++..+..+.. +.| .+....++..+.. .+.+
T Consensus 179 ~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~q-----l~~l 253 (379)
T PRK11658 179 HAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQ-----LAKL 253 (379)
T ss_pred CCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHH-----HHHH
Confidence 6544556668899988678998888765532210 111 1111122222221 1556
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCc-ccccccccCCCCCCcccccCC----chHHHHHHHHhhCeeeeCCC--
Q 018172 245 EYGRRLMSERWNMLRQVIRQSGVFGLPEYPLE-YCNFTGKFTNSHPGFAWLESK----EDEDCEKLLRAERIMARGGR-- 317 (360)
Q Consensus 245 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gI~~~pg~-- 317 (360)
++..++-++..+.+.+.|++++...+..+... ..++. .+.+.++.. +.+.+.+.|+++||.+++..
T Consensus 254 ~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~ 326 (379)
T PRK11658 254 EALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWH-------LFIIRVDEERCGISRDALMEALKERGIGTGLHFRA 326 (379)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEE-------EEEEEECCccccCCHHHHHHHHHHCCCCCcccCcC
Confidence 77777777777788888887764333222210 00000 001222211 12778888999999876321
Q ss_pred --C---CC----C---------CCCeEEEEecC--ChHHHHHHHHHHHHHHh
Q 018172 318 --R---FG----A---------DAKYARVSMLS--REEIFNIFLERLSAIQG 349 (360)
Q Consensus 318 --~---f~----~---------~~~~~R~s~~~--~~e~~~~~~~~l~~~~~ 349 (360)
. |. . ....+.+.+.. ++|+++..+++|++++.
T Consensus 327 ~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~~ 378 (379)
T PRK11658 327 AHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIAG 378 (379)
T ss_pred cccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence 0 00 0 02235555543 89999999999998764
No 208
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.87 E-value=2.2e-20 Score=175.68 Aligned_cols=274 Identities=15% Similarity=0.133 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc-CCCCCCCceEEEeCCCCCCcHH-HHHHhCCe------
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS-SPGGPEPISVVSAAPYYSQYPA-ETDYLRSG------ 110 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~-~~gd~~~~~vl~~~p~~~~~~~-~~~~~g~~------ 110 (360)
.++++.+++++... .+.+.+++++++++++..++.... .+|+. +|+..+++|..... .....+..
T Consensus 70 ~~~~~~la~~l~~~----~~~~~~~~~~sG~~a~~~A~~~a~~~~g~~---~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~ 142 (377)
T PRK02936 70 NSLQEEVASLLAEN----SAGDLVFFCNSGAEANEAALKLARKHTGKS---KIVTFEQSFHGRTFGTMSATGQEKIKEGF 142 (377)
T ss_pred CHHHHHHHHHHHhc----CCCCEEEEeCCcHHHHHHHHHHHHHhcCCC---eEEEECCCcCCCcHHhhhccCCccccccC
Confidence 44555555554421 112479999999999999988653 23432 38888888875532 22222221
Q ss_pred ------eeeecC-Ccccccc--CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCC--cCC-
Q 018172 111 ------LYKWDG-DANTFDK--NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYT--PIT- 173 (360)
Q Consensus 111 ------~~~~~~-~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~--~~~- 173 (360)
+..++. |.+.+.. .+++++|++..+++++|.... +.+.++|+++|+++|+||+|.+.... ...
T Consensus 143 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~ 222 (377)
T PRK02936 143 GPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAY 222 (377)
T ss_pred CCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHH
Confidence 112221 2222222 356889999989999998743 46678899999999999999742211 111
Q ss_pred C--CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 174 G--AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 174 ~--~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
. ....+ +.++||.++ +|+|+||+++ ++++.+.+.......+++.|++.|.++.++++.+... .++ +.+
T Consensus 223 ~~~~~~~d--i~t~sK~l~-~G~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~--~~~----~~~ 292 (377)
T PRK02936 223 EQFGLDPD--IVTVAKGLG-NGIPVGAMIG-KKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQP--SFL----EEV 292 (377)
T ss_pred HhhCCCCc--EEEEccccc-CCCccEEEEE-cHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhc--cHH----HHH
Confidence 1 11112 347999999 9999999998 8999988865544456788999999999999854321 344 445
Q ss_pred HHHHHHHHHHHHh----cCCcccCCCCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCCCCCCCeE
Q 018172 252 SERWNMLRQVIRQ----SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRFGADAKYA 326 (360)
Q Consensus 252 ~~~~~~l~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~~~~~~~ 326 (360)
+++.+++.+.|++ ++.+... .+.+.++|+.+++. ..+.+.|.++||.+.|+. .+++
T Consensus 293 ~~~~~~l~~~L~~~~~~~~~~~~v--------------~~~g~~~~i~~~~~~~~~~~~l~~~gv~v~~~g-----~~~l 353 (377)
T PRK02936 293 QEKGEYFLQKLQEELEHLECVKNI--------------RGKGLMIGIECTEEVAPVIEQLREEGLLVLSAG-----PNVI 353 (377)
T ss_pred HHHHHHHHHHHHHHHhhCCcEEeE--------------eecceEEEEEecchHHHHHHHHHHCCeEEecCC-----CCEE
Confidence 5555555555554 3221111 12334788888655 677788899999998842 4699
Q ss_pred EEEe--cCChHHHHHHHHHHHHHH
Q 018172 327 RVSM--LSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 327 R~s~--~~~~e~~~~~~~~l~~~~ 348 (360)
||++ ..+++++++++++|.+++
T Consensus 354 Ri~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 354 RLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred EEECCcccCHHHHHHHHHHHHHhC
Confidence 9995 449999999999998764
No 209
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.87 E-value=5.6e-20 Score=171.99 Aligned_cols=252 Identities=14% Similarity=0.092 Sum_probs=167.3
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH----HHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA----ETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~----~~~~~g~~~~~ 113 (360)
...|+++++++.|. ++.+++++| +.++..++ .++++||+ |++++|.|..... .+...|++++.
T Consensus 52 ~~~Le~~la~l~g~-------~~al~~~SG-~~Al~~~l-~~l~pGd~----Vi~~~~~y~~t~~~~~~~~~~~gi~v~~ 118 (380)
T PRK06176 52 RFALEELIADLEGG-------VKGFAFASG-LAGIHAVF-SLFQSGDH----VLLGDDVYGGTFRLFDKVLVKNGLSCTI 118 (380)
T ss_pred HHHHHHHHHHHhCC-------CCEEEECCH-HHHHHHHH-HHcCCCCE----EEEcCCChhHHHHHHHHHHHhcCeEEEE
Confidence 48999999999984 345666665 66887666 57789998 9999999986654 34556888887
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+ .+.+.. ++++++|++.+|+||||.+.+ +.+.++|+++|+++|+|++|..+.. ..+...+.+++++|++|.+
T Consensus 119 vd~~d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~-~~p~~~gaDivv~S~tK~l 197 (380)
T PRK06176 119 IDTSDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYY-QNPLLLGADIVVHSGTKYL 197 (380)
T ss_pred cCCCCHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCcccccc-CCccccCCCEEEecCceec
Confidence 7653 344433 467999999999999999998 6788888889999999999985422 1223457789999999999
Q ss_pred CCCC-ceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 190 GHAG-SRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 190 ~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+.+| .-.|++++.++++.+.+...+...+...++.....+...++ -+....++..++...+.+.|.+++.+
T Consensus 198 ~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~--------tl~~R~~~~~~~a~~la~~L~~~p~v 269 (380)
T PRK06176 198 GGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIK--------TLGLRMEAHQKNALCVAEFLEKHPKV 269 (380)
T ss_pred cCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccC--------cHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 7555 34677777567788888777765455555555444433222 22333333345667778888888766
Q ss_pred ccCCCCCcc----cccccccCCCCCCcccccCCchHHHHHHHHhhCe
Q 018172 269 GLPEYPLEY----CNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERI 311 (360)
Q Consensus 269 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI 311 (360)
..+.+++.. +........+.+..+.+.+++.+.+.+.+.+-.+
T Consensus 270 ~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~~ 316 (380)
T PRK06176 270 EKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESLKL 316 (380)
T ss_pred eEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCc
Confidence 554443311 1111111234455677888654444444444343
No 210
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.86 E-value=5.6e-20 Score=174.46 Aligned_cols=269 Identities=10% Similarity=-0.005 Sum_probs=184.9
Q ss_pred CCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH----HHHhCCee----eeecCCc------ccccc
Q 018172 58 DGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE----TDYLRSGL----YKWDGDA------NTFDK 123 (360)
Q Consensus 58 ~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~----~~~~g~~~----~~~~~~~------~~~~~ 123 (360)
++++|++|+|+|++++.++.+++++++. +..|+++..+|++.... ++..|+++ +.++.+. +.+..
T Consensus 85 ~~~~v~~~~~~t~~l~~~~~~~~~~~~~-~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~ 163 (406)
T TIGR01814 85 KEDEVVVMNTLTINLHLLLASFYKPTPK-RYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILD 163 (406)
T ss_pred CCCcEEEeCCchHHHHHHHHHhcCCcCC-ccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHH
Confidence 4568999999999999999998766531 11388888999985443 44568876 4554432 12211
Q ss_pred -----CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc-CCCCceE
Q 018172 124 -----NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT-GHAGSRI 196 (360)
Q Consensus 124 -----~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~ 196 (360)
+++|++|++++++|.||..++ +.+.++|+++|+++++|++++.+..+......+.++++.|.+|.+ +.|| .
T Consensus 164 ~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK~l~g~pG--~ 241 (406)
T TIGR01814 164 TIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWCTYKYLNAGPG--A 241 (406)
T ss_pred HHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEcCccccCCCCC--e
Confidence 368999999999999999998 778888888999999999999877665556678899999999976 4466 4
Q ss_pred EEEeecCHHHHHHHHHHH-----------------------hhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHH
Q 018172 197 GWALVKDTEVARKMTRFI-----------------------ELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSE 253 (360)
Q Consensus 197 G~~~~~~~~~~~~l~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 253 (360)
|.++. +... +.+.... .+...++|.+...++.++++.+.. ..+++.+++..+
T Consensus 242 ~l~v~-~~~~-~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~---~g~~~i~~~~~~ 316 (406)
T TIGR01814 242 GAFVH-EKHA-HTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQ---AGMEALRKKSLL 316 (406)
T ss_pred EEEEe-hhhh-hhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHh---cCHHHHHHHHHH
Confidence 43333 3332 2221100 001233556666677767776533 447888889999
Q ss_pred HHHHHHHHHHhcC----CcccCCCCCcccccccccCCCCCCcccccCC-chHHHHHHHHhhCeeeeCCCCCCCCCCeEEE
Q 018172 254 RWNMLRQVIRQSG----VFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-EDEDCEKLLRAERIMARGGRRFGADAKYARV 328 (360)
Q Consensus 254 ~~~~l~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~ 328 (360)
..+++.+.|.++. ++.+..+.... ..+..+.+.++ +.+++.+.|.++||.+... .++.+|+
T Consensus 317 l~~~l~~~l~~~~~~~~~~~i~~~~~~~---------~r~~~v~~~~~~~~~~~~~~L~~~gi~v~~~-----~~~~iRi 382 (406)
T TIGR01814 317 LTDYLEELIKARCGGPPVLTIITPRDHA---------QRGCQLSLTHPVPGKAVFQALIKRGVIGDKR-----EPSVIRV 382 (406)
T ss_pred HHHHHHHHHHhhcCCCCceEEeCCCChh---------hcCCeEEEEecCCHHHHHHHHHHCCEEEecc-----CCCeEEE
Confidence 9999999987752 34443332100 11223445555 4577888888999987531 2468999
Q ss_pred Eec-C--ChHHHHHHHHHHHHHH
Q 018172 329 SML-S--REEIFNIFLERLSAIQ 348 (360)
Q Consensus 329 s~~-~--~~e~~~~~~~~l~~~~ 348 (360)
|++ . +++|+++++++|++++
T Consensus 383 S~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 383 APVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred echhccCCHHHHHHHHHHHHHHh
Confidence 984 3 8999999999999875
No 211
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=1.1e-19 Score=172.10 Aligned_cols=290 Identities=14% Similarity=0.116 Sum_probs=183.3
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHH----hCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDY----LRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~----~g~~~~~ 113 (360)
..+|+++++++.+. + ..++++++++++..++..++++||+ |+++.+.|......+.. .|.++..
T Consensus 60 ~~~Le~~lA~l~g~-------~-~~l~~ssG~~Ai~~al~al~~~Gd~----Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~ 127 (425)
T PRK06084 60 NDVLEQRVAALEGG-------V-GALAVASGMAAITYAIQTIAEAGDN----IVSVAKLYGGTYNLLAHTLPRIGIETRF 127 (425)
T ss_pred HHHHHHHHHHHhCC-------C-ceeEehhHHHHHHHHHHHHhCCCCE----EEEeCCCcchHHHHHHHhcccceeEEEE
Confidence 48999999999984 3 3556677789999999999999998 99999999976655543 4677666
Q ss_pred ecC-Ccccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDG-DANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~-~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++. |.+.+.. ++++++|++++|+||||.+++ +.+.++|+++++++|+|++|..+... .+...+.+++++|++|.+
T Consensus 128 ~d~~d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~-~p~~~gaDivv~S~tK~l 206 (425)
T PRK06084 128 AAHDDIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLC-RPFEHGADIVVHSLTKYI 206 (425)
T ss_pred ECCCCHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-ChhhcCCCEEEECchhcc
Confidence 653 3344433 467899999999999999998 67788888899999999999854321 122456789999999999
Q ss_pred CCCCceEEEEeecCHHH--HH----------------------------HH----HHHHhhccccCChHHHHHHHHHhcc
Q 018172 190 GHAGSRIGWALVKDTEV--AR----------------------------KM----TRFIELGSIGVSKESQLRAAKILGI 235 (360)
Q Consensus 190 ~~~G~r~G~~~~~~~~~--~~----------------------------~l----~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (360)
+.+|.++|.+++.+..+ .+ .+ .......+...++.....+ +..
T Consensus 207 ~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~---lrg 283 (425)
T PRK06084 207 GGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLI---LQG 283 (425)
T ss_pred cccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHH---HcC
Confidence 88899999877732211 00 00 0011112333444433333 333
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcc----cccccccCCC-CCCcccccCCch-HHHHHHHHhh
Q 018172 236 VSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEY----CNFTGKFTNS-HPGFAWLESKED-EDCEKLLRAE 309 (360)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~l~~~ 309 (360)
+ +-+....++-+++...+.+.|++++.+..+.+++.. +........+ .+..+.+.++++ +.+.+.+.+-
T Consensus 284 l-----~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~~~~~~~~f~~~l 358 (425)
T PRK06084 284 L-----ETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKGGQAAGARFIDAL 358 (425)
T ss_pred c-----CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecCCHHHHHHHHHhC
Confidence 2 334445555567777888999999876654444321 1111111123 355677777544 3333333333
Q ss_pred Ceee---eCCC----------------------CCCCCCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 310 RIMA---RGGR----------------------RFGADAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 310 gI~~---~pg~----------------------~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
.+.. .-|. ..|..++.+|||++.+ +.+.+++.|.+.+.+
T Consensus 359 ~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE--d~~dLi~dl~~Al~~ 422 (425)
T PRK06084 359 KLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGIE--HIDDIIADLAQALDA 422 (425)
T ss_pred CcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHh
Confidence 3322 1111 1122356899999662 344556666666554
No 212
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.86 E-value=7.7e-20 Score=171.32 Aligned_cols=274 Identities=16% Similarity=0.118 Sum_probs=181.4
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeec-C
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWD-G 116 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~-~ 116 (360)
+.++|++++++++. ++.+++++|. .++..++..+.++||. |++..-.|.+....+.......+.++ .
T Consensus 58 ~~~~e~~la~~~~~-------~~~l~~~sG~-~a~~~~~~~~~~~~d~----ii~d~~~H~sv~~~~~~~~~~~~~~~~~ 125 (370)
T PRK05937 58 LDDLEHKIAHFHGA-------PEAFIVPSGY-MANLGLCAHLSSVTDY----VLWDEQVHISVVYSLSVISGWHQSFRHN 125 (370)
T ss_pred HHHHHHHHHHHhCC-------CeEEEECChH-HHHHHHHHHhCCCCCE----EEEEhhhhHHHHHHHHHcCCceEEecCC
Confidence 48999999999995 3457777776 4444556666667776 77778888888888777654444444 3
Q ss_pred Ccccccc--------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCC-------CCCCccE
Q 018172 117 DANTFDK--------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPIT-------GAADHDI 180 (360)
Q Consensus 117 ~~~~~~~--------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~-------~~~~~~i 180 (360)
|.+.++. .+++++|++++++|+||.+.+ +++.++|+++++++++|++|+.+.+.... +..+.++
T Consensus 126 d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~ 205 (370)
T PRK05937 126 DLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYA 205 (370)
T ss_pred CHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcE
Confidence 3333222 134567788999999999998 78888898899999999999864332211 1122346
Q ss_pred EEeccccccCCCCceEEEEeecCHHHHHHHHHHHh--hccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIE--LGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
.+.||||.+|+.| +.++. .++..+.+..... ..+.+.+++...++.++++.+.+. .+..++++++.++++
T Consensus 206 ~~~tlsK~~g~~G---~~vl~-~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~----~~~~~~~l~~l~~~l 277 (370)
T PRK05937 206 VLVTYSKALGSMG---AALLS-SSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQE----GELARKQLFRLKEYF 277 (370)
T ss_pred EEEechhhhhcCc---eEEEc-CHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhC----cHHHHHHHHHHHHHH
Confidence 7899999999777 33555 5665555543211 123346666666666667655322 245567778888888
Q ss_pred HHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC--ChHH
Q 018172 259 RQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYARVSMLS--REEI 336 (360)
Q Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~--~~e~ 336 (360)
.+.|.... + +.. ..+.+.....+.+.+.|.++||.+... .+ ...+++|+|+.. ++||
T Consensus 278 ~~~l~~~~------~-~~~------------~~i~~~~~~~~~~~~~L~~~gi~v~~~-~~-~~~~~iRis~~~~~t~ed 336 (370)
T PRK05937 278 AQKFSSAA------P-GCV------------QPIFLPGISEQELYSKLVETGIRVGVV-CF-PTGPFLRVNLHAFNTEDE 336 (370)
T ss_pred HHhcCCCC------C-CCE------------EEEEeCChhHHHHHHHHHHCCeeEEee-CC-CCCCEEEEEcCCCCCHHH
Confidence 77765431 0 000 012232222377888899999988642 12 235689999975 9999
Q ss_pred HHHHHHHHHHHHhchh
Q 018172 337 FNIFLERLSAIQGGSI 352 (360)
Q Consensus 337 ~~~~~~~l~~~~~~~~ 352 (360)
+++++++|.+++++..
T Consensus 337 id~l~~~L~~~~~~~~ 352 (370)
T PRK05937 337 VDILVSVLATYLEKYQ 352 (370)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999987643
No 213
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.86 E-value=5.2e-20 Score=174.45 Aligned_cols=264 Identities=14% Similarity=0.064 Sum_probs=175.0
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-------CCCCCCceEEEeCCCCCCcHHHHHHhC-------------CeeeeecC-Cc
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-------PGGPEPISVVSAAPYYSQYPAETDYLR-------------SGLYKWDG-DA 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-------~gd~~~~~vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~-~~ 118 (360)
+.+++++++++++..+++.... .+. .+++..+-+|......+...+ .+++.++. |.
T Consensus 98 ~~~~~~~sGseA~e~a~klar~~~~~~~~~~~---~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 174 (403)
T PRK05093 98 ERVFFANSGAEANEAAFKLARRYACDRHGPEK---TEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDL 174 (403)
T ss_pred CEEEEeCchHHHHHHHHHHHHHHHhhcCCCCC---CeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCH
Confidence 4799999999999999886621 122 137777777766543322211 12223322 22
Q ss_pred ccccc--CCCeeEEEEcCCCCCCcccc--h----HHHHHHhhhcCcEEEEeecccCCCCCc--CC-CCCCccEEEecccc
Q 018172 119 NTFDK--NNGAYIEVVNSPNNPDGTIR--E----AVLAKVNRSAEGKLIHDLAYYWPQYTP--IT-GAADHDIMLFTLSK 187 (360)
Q Consensus 119 ~~~~~--~~~~~~i~~~~p~NPtG~~~--~----~~~~~~~~~~~~~li~D~ay~~~~~~~--~~-~~~~~~i~~~S~sK 187 (360)
+.++. ++++++|+++ |.||+|-.+ + +.+.++|+++|+++|+||+|.+..... .. ...+...-+.||||
T Consensus 175 ~~l~~~l~~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s~sK 253 (403)
T PRK05093 175 AAVKAVIDDHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTSAK 253 (403)
T ss_pred HHHHHHhcCCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEEEecc
Confidence 33322 3467777777 888887664 3 467788999999999999998422111 11 11111122679999
Q ss_pred ccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018172 188 CTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGV 267 (360)
Q Consensus 188 ~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 267 (360)
+++ +|+|+||+++ ++++++.+.......+++.+++.|.++.++|+.+.. ++.++.++++++++.+.|+++..
T Consensus 254 ~l~-~G~rig~vv~-~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~------~~~~~~~~~~~~~l~~~L~~~~~ 325 (403)
T PRK05093 254 ALG-GGFPIGAMLT-TAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINT------PEVLEGVKARRQRFVDGLQKINQ 325 (403)
T ss_pred ccc-CCcceEEEEE-cHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh------ccHHHHHHHHHHHHHHHHHHHHh
Confidence 999 9999999999 899999887644445678899999999998875432 24457888888999998887631
Q ss_pred cccCCCCCcccccccccCCCCCCcccccCCc-----hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEe--cCChHHHHHH
Q 018172 268 FGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-----DEDCEKLLRAERIMARGGRRFGADAKYARVSM--LSREEIFNIF 340 (360)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~--~~~~e~~~~~ 340 (360)
..... ...+..+.++|+.++. ...+...|.++||.+.|+ ..+++|+++ ..++++++++
T Consensus 326 -~~~~~---------~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~-----g~~~lRl~~~~~~~~~~i~~~ 390 (403)
T PRK05093 326 -KYGVF---------SEIRGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLVA-----GPDVLRFAPSLVIEEADIDEG 390 (403)
T ss_pred -hCCCe---------EeEeeCceEEEEEecCcchhHHHHHHHHHHHCCeEEecC-----CCCEEEEeCCCCCCHHHHHHH
Confidence 10000 0112334467777642 245566777789999874 246999965 3389999999
Q ss_pred HHHHHHHHhc
Q 018172 341 LERLSAIQGG 350 (360)
Q Consensus 341 ~~~l~~~~~~ 350 (360)
+++|.+++.+
T Consensus 391 ~~~l~~~l~~ 400 (403)
T PRK05093 391 LARFEKAVAK 400 (403)
T ss_pred HHHHHHHHHH
Confidence 9999998864
No 214
>PRK07505 hypothetical protein; Provisional
Probab=99.86 E-value=8.5e-20 Score=172.97 Aligned_cols=276 Identities=12% Similarity=0.052 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc----CCCCCCCceEEEeCCCCCCcHH---HHHHhCCee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS----SPGGPEPISVVSAAPYYSQYPA---ETDYLRSGL 111 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~----~~gd~~~~~vl~~~p~~~~~~~---~~~~~g~~~ 111 (360)
.++++.++++++ . +.+++++| +++...++..+. .+|+. .+++.+..|..... .....+.++
T Consensus 94 ~~l~~~la~~~~-------~-~~~~~~sG-~~a~~~ai~~~~~~~~~~~~~---~vi~~~~~~H~s~~~~~~~~~~~~~v 161 (402)
T PRK07505 94 KDLEEALSELFG-------A-SVLTFTSC-SAAHLGILPLLASGHLTGGVP---PHMVFDKNAHASLNILKGICADETEV 161 (402)
T ss_pred HHHHHHHHHHhC-------C-CEEEECCh-HHHHHHHHHHHHhcccCCCCC---CEEEEchhhhHhHHhhhhhhhcCCeE
Confidence 677777777766 2 34556655 567666665432 22332 26666655543221 112235566
Q ss_pred eeecC-Ccccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCC---CC-C----cCCC--CCC
Q 018172 112 YKWDG-DANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWP---QY-T----PITG--AAD 177 (360)
Q Consensus 112 ~~~~~-~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~---~~-~----~~~~--~~~ 177 (360)
+.++. |.+.+.. +++++++++++|+||||.+.+ +.+.++|+++++++|+||+|... .. . ...+ ..+
T Consensus 162 ~~~~~~d~~~l~~~~~~~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d 241 (402)
T PRK07505 162 ETIDHNDLDALEDICKTNKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNE 241 (402)
T ss_pred EEeCCCCHHHHHHHHhcCCCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCC
Confidence 76663 3333332 345789999999999999988 67888999999999999998521 11 1 1112 467
Q ss_pred ccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhcccc--CChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHH
Q 018172 178 HDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIG--VSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERW 255 (360)
Q Consensus 178 ~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 255 (360)
+++++.|+||.++.+| ||+++.++++++.+.......+++ .++.++.++.++++...+ +.+.+.++.++++.
T Consensus 242 ~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~---~~~~~~~~~l~~~~ 315 (402)
T PRK07505 242 RTIIAASLGKAFGASG---GVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLS---EELDQLQQKLQNNI 315 (402)
T ss_pred CeEEEEechhhhhccC---eEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhc---cCcHHHHHHHHHHH
Confidence 7899999999999776 888755788888887765443333 445666666666653322 34444555565555
Q ss_pred HHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhhCeeeeCCCCCCC--CCCeEEEEe
Q 018172 256 NMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERIMARGGRRFGA--DAKYARVSM 330 (360)
Q Consensus 256 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~pg~~f~~--~~~~~R~s~ 330 (360)
..+.+.+... ..+.+. .+.++.+++ ...+.+.|.++||.++++..+.. .++++||++
T Consensus 316 ~~~~~~~~~~-------~~g~~~-----------~i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~ 377 (402)
T PRK07505 316 ALFDSLIPTE-------QSGSFL-----------PIRLIYIGDEDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMF 377 (402)
T ss_pred HHHHHHHHhc-------CCCCCC-----------CEEEEEeCCHHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEec
Confidence 5443332111 111110 012333332 25677778899999999744332 236899999
Q ss_pred cC--ChHHHHHHHHHHHHHHhc
Q 018172 331 LS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 331 ~~--~~e~~~~~~~~l~~~~~~ 350 (360)
.. ++|++++++++|.+++.+
T Consensus 378 ~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 378 RASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred CccCCHHHHHHHHHHHHHHHHh
Confidence 64 999999999999998754
No 215
>PLN02509 cystathionine beta-lyase
Probab=99.85 E-value=3.9e-19 Score=168.83 Aligned_cols=286 Identities=12% Similarity=0.058 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH----HHHhCCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE----TDYLRSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~----~~~~g~~~~~~ 114 (360)
.+|++.++++.+ .+ +.++++|+++++..++ .++++||+ |+++.|.|..+... +...|++++.+
T Consensus 136 ~aLE~~lA~leg-------~e-~ai~~~SG~aAi~~il-~ll~~GD~----VI~~~~~y~~t~~ll~~~l~~~G~~v~~v 202 (464)
T PLN02509 136 DALESLLAKLDK-------AD-RAFCFTSGMAALSAVT-HLIKNGEE----IVAGDDVYGGSDRLLSQVVPRSGVVVKRV 202 (464)
T ss_pred HHHHHHHHHHhC-------CC-EEEEeCcHHHHHHHHH-HHhCCCCE----EEEcCCchhhHHHHHHHHHHHCCeEEEEe
Confidence 666666666665 33 5666677788887655 57899998 99999999988744 44679998887
Q ss_pred cCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccccccC
Q 018172 115 DGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCTG 190 (360)
Q Consensus 115 ~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~~ 190 (360)
+.. .+.+.. ++++++|++++|+||||.+.+ +.+.++|+++|+++|+|++|..+.. ..+...+.+++++|++|.++
T Consensus 203 d~~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~-~~pl~~gaDivv~S~tK~l~ 281 (464)
T PLN02509 203 NTTNLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVL-SRPLELGADIVMHSATKFIA 281 (464)
T ss_pred CCCCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCcccccc-CChhhcCCcEEEecCccccc
Confidence 643 233333 568999999999999999877 6778888889999999999875432 12224567899999999886
Q ss_pred CCC-ceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 018172 191 HAG-SRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFG 269 (360)
Q Consensus 191 ~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 269 (360)
-+| .-.|.+++.++.+.+.+...+...+...++.. ++..+..+ +.+....++.+++.+.+.+.|++++.+.
T Consensus 282 G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~---A~l~lr~L-----~tL~~R~~r~~~nA~~la~~L~~~p~V~ 353 (464)
T PLN02509 282 GHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFD---CWLCLRGI-----KTMALRIEKQQENARKIAMYLSSHPRVK 353 (464)
T ss_pred CCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHH---HHHHHhhh-----hhHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 433 33577776566666666655543333344444 33333322 4566677778888899999999998766
Q ss_pred cCCCCCcc----cccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCC--------------------------
Q 018172 270 LPEYPLEY----CNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRF-------------------------- 319 (360)
Q Consensus 270 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f-------------------------- 319 (360)
.+.++|-. +........+.+..+.+.+.+.+.+.+.+..-.+. ..+..+
T Consensus 354 ~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~-~~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~ 432 (464)
T PLN02509 354 KVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYF-SIAVSFGSVKSLISMPCFMSHASIPAEVREAR 432 (464)
T ss_pred EEECCCCCCCccHHHHHHhCCCCceEEEEEeCCHHHHHHHHHcCCcc-eEcccCCCCCceeeCCcccccccCCHHHHHhc
Confidence 54444311 11111112234445666664334444444333322 111111
Q ss_pred CCCCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 320 GADAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 320 ~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
|..++.+|+|++.+ +.+.+++.|.+.++
T Consensus 433 Gi~~~liRlSvGlE--~~~DLi~Dl~~Al~ 460 (464)
T PLN02509 433 GLTEDLVRISAGIE--DVDDLISDLDIAFR 460 (464)
T ss_pred CCCCCeEEEEeccC--CHHHHHHHHHHHHc
Confidence 22356899999663 34555666666654
No 216
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.85 E-value=1.4e-19 Score=169.90 Aligned_cols=259 Identities=14% Similarity=0.080 Sum_probs=181.4
Q ss_pred cEEEcCChHHHHHHHHHhhc--CCCCCCCceEEEeCCCCCCc-HHHHHHhCCee---------eee---c-CCcccccc-
Q 018172 61 HIVIGTGSTQLYQAALYALS--SPGGPEPISVVSAAPYYSQY-PAETDYLRSGL---------YKW---D-GDANTFDK- 123 (360)
Q Consensus 61 ~i~~t~G~t~~l~~~~~~l~--~~gd~~~~~vl~~~p~~~~~-~~~~~~~g~~~---------~~~---~-~~~~~~~~- 123 (360)
.+++++++++++..++.... ..++. |++.+..|... ...+...|.+. ..+ + .|.+.+..
T Consensus 86 ~~~~~~SGseA~~~Al~~ar~~~~~~~----vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~ 161 (375)
T PRK04260 86 LAFFCNSGAEANEAAIKIARKATGKQE----IITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKAL 161 (375)
T ss_pred EEEEcCccHHHHHHHHHHHHHhcCCCe----EEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHh
Confidence 36889999999998888763 22333 88888887754 33333322211 111 1 12233322
Q ss_pred -CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCC--cCC---CCCCccEEEeccccccCCC
Q 018172 124 -NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYT--PIT---GAADHDIMLFTLSKCTGHA 192 (360)
Q Consensus 124 -~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~--~~~---~~~~~~i~~~S~sK~~~~~ 192 (360)
++++.+|++..++|++|.+.+ +.+.++|+++|+++|+||+|.+.... ... .....+ +.||||.++ +
T Consensus 162 l~~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd--i~t~sK~l~-~ 238 (375)
T PRK04260 162 VNKNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD--IFTLAKGLA-N 238 (375)
T ss_pred cCCCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC--EEEeccccc-C
Confidence 356778999999999998855 46778899999999999999742111 111 111122 458999999 8
Q ss_pred CceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCC
Q 018172 193 GSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPE 272 (360)
Q Consensus 193 G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 272 (360)
|+|+||+++ ++++.+.+.......+++.+++.+.++.++++.+... .++++.++..+.+++.+.+.+.+++.+..
T Consensus 239 G~~ig~~~~-~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-- 313 (375)
T PRK04260 239 GVPVGAMLA-KSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTA--GFLEQALENGNYLQEQLQKALQDKETVTT-- 313 (375)
T ss_pred CcceEEEEE-cHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHhhCCCeeE--
Confidence 999999999 7888888865445567788999999999999865443 77888888888888888888776642221
Q ss_pred CCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC--ChHHHHHHHHHHHHHH
Q 018172 273 YPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRFGADAKYARVSMLS--REEIFNIFLERLSAIQ 348 (360)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~ 348 (360)
.++.+.++|++++.. ..+.+.+.++||.+.|+ ..+.+|+++.. +++++++++++|++++
T Consensus 314 ------------~~~~g~~~~~~~~~~~~~~~~~l~~~Gi~v~~~-----~~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 314 ------------VRGLGYMIGIETTADLSQLVEAARDKGLIVLTA-----GTNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred ------------EeccceEEEEEecCcHHHHHHHHHhCCCEEecC-----CCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 113445788887543 66778888999999874 24689999833 8999999999998763
No 217
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.85 E-value=6.1e-19 Score=165.45 Aligned_cols=279 Identities=14% Similarity=0.108 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
.++++.++++++. +++++|+|+++++.+++..+ +++||+ |+++.|+|..+...+...|++++.++++
T Consensus 34 ~~~e~~la~~~g~--------~~~v~~~sgt~al~~~l~~~~~~~Gd~----Viv~~~t~~~~~~~~~~~G~~~v~~d~d 101 (375)
T PRK11706 34 RRCQQWLEQRFGS--------AKVLLTPSCTAALEMAALLLDIQPGDE----VIMPSYTFVSTANAFVLRGAKIVFVDIR 101 (375)
T ss_pred HHHHHHHHHHhCC--------CeEEEECCHHHHHHHHHHHhCCCCCCE----EEECCCCcHHHHHHHHHcCCEEEEEecC
Confidence 5666667777663 47999999999999887766 689998 9999999999999999999999999877
Q ss_pred cccccc---------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC-CCcCCCCCCccEEEeccc
Q 018172 118 ANTFDK---------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ-YTPITGAADHDIMLFTLS 186 (360)
Q Consensus 118 ~~~~~~---------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~-~~~~~~~~~~~i~~~S~s 186 (360)
.+++.. ++++++|+++ ||+|...+ +.+.++|+++|+++|+|++|+.+. +.........++.++||+
T Consensus 102 ~~~~~~d~~~le~~i~~~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~ 178 (375)
T PRK11706 102 PDTMNIDETLIEAAITPKTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFH 178 (375)
T ss_pred CCcCCcCHHHHHHhcCCCCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeeecCcCEEEEeCC
Confidence 665332 3578998865 57998877 677788888999999999998543 111111111245566665
Q ss_pred --cccCCCCceEEEEeecCHHHHHHHHHHHhhc-----------------cccCChHHH-HHHHHHhcccCCCchhHHHH
Q 018172 187 --KCTGHAGSRIGWALVKDTEVARKMTRFIELG-----------------SIGVSKESQ-LRAAKILGIVSDDYPNFFEY 246 (360)
Q Consensus 187 --K~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~-----------------~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~ 246 (360)
|.++ +|.+.++++. ++++.+.++..+..+ ..+.|...+ ..++..+..+ +.+++
T Consensus 179 ~~K~l~-~g~gG~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql-----~~l~~ 251 (375)
T PRK11706 179 ETKNYT-AGEGGALLIN-DPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQL-----EAADR 251 (375)
T ss_pred CCcccc-ccCCeEEEEC-CHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHH-----HHHHH
Confidence 9998 6888777765 899998887766431 122333222 2222223322 44566
Q ss_pred HHHHHHHHHHHHHHHHHhcC---CcccCC-CCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhhCeeeeCCCC-
Q 018172 247 GRRLMSERWNMLRQVIRQSG---VFGLPE-YPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERIMARGGRR- 318 (360)
Q Consensus 247 ~~~~~~~~~~~l~~~l~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~pg~~- 318 (360)
..++.+++.+++.+.|.+++ .+..+. +.+...+ ..++++.+++ .+.+.+.|.++||.++....
T Consensus 252 ~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~r~~l~~~L~~~gI~~~~~~~p 322 (375)
T PRK11706 252 INQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHN---------AHMFYIKLRDLEDRSALINFLKEAGIMAVFHYIP 322 (375)
T ss_pred HHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCcee---------eEEEEEEECCcCCHHHHHHHHHHCCCCccccCCc
Confidence 66666677777777787764 233221 2111111 1134555543 28889999999999764310
Q ss_pred ---------CCC-----------CCCeEEEEecC--ChHHHHHHHHHHHHHH
Q 018172 319 ---------FGA-----------DAKYARVSMLS--REEIFNIFLERLSAIQ 348 (360)
Q Consensus 319 ---------f~~-----------~~~~~R~s~~~--~~e~~~~~~~~l~~~~ 348 (360)
++. ....+.+.+.. ++++++..+++|++++
T Consensus 323 ~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 323 LHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred cCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 000 02235555543 7899999999998865
No 218
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.85 E-value=7.2e-20 Score=166.24 Aligned_cols=295 Identities=14% Similarity=0.075 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHHHHHh---CCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAETDYL---RSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~~~~---g~~~~~~ 114 (360)
++.|+.+|+++++ ++.+|++|+|+|+++++++..+ ...++...+.|++..-.|++....++.+ |.+++.+
T Consensus 88 E~aR~~VAklInA------d~~dIiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~l 161 (428)
T KOG1549|consen 88 EAAREQVAKLINA------DPSDIVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYL 161 (428)
T ss_pred HHHHHHHHHHhCC------CCCcEEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEe
Confidence 8999999999997 4556999999999999999988 3345511124999999999998776664 8999988
Q ss_pred cCCcccccc--------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecc
Q 018172 115 DGDANTFDK--------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTL 185 (360)
Q Consensus 115 ~~~~~~~~~--------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~ 185 (360)
|.+.+++.. +++|+++.+...||.+|+.+| +++..+|+++++.++.|.|++-+..+......+.+++..|.
T Consensus 162 pv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~ 241 (428)
T KOG1549|consen 162 PVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISA 241 (428)
T ss_pred ccCccccccHHHHHHhcCCCceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHcCchheeeec
Confidence 877555433 579999999999999999999 88888999999999999999988888888889999999999
Q ss_pred ccccCCCCceEEEEeecC--HHHH--HHH---HHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 186 SKCTGHAGSRIGWALVKD--TEVA--RKM---TRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 186 sK~~~~~G~r~G~~~~~~--~~~~--~~l---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
+|.+|++| +|++.+++ +.+. ..+ ......+..+.+.+.+....++.+... .++......+.+..+.+
T Consensus 242 HK~ygp~~--iGaLYvr~~~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~----~~~~~~~~~~~~~~~~l 315 (428)
T KOG1549|consen 242 HKIYGPPG--IGALYVRRKRPRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVN----KEMAYDEAIIKRLSEKL 315 (428)
T ss_pred ccccCCCc--ceEEEEccCCCcccccCcccCCccccccccCCcCchhhhhhHHHHHHHH----hhcchhHHHHHHHHHHH
Confidence 99999999 89888843 1111 001 122233445566666666666555443 23333333333344555
Q ss_pred HHHHHh-cCCcccCCCCCcccccccccCCCCCCcccccCCch----HHHHHHHHhhCeeeeC------------CCCCCC
Q 018172 259 RQVIRQ-SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED----EDCEKLLRAERIMARG------------GRRFGA 321 (360)
Q Consensus 259 ~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~gI~~~p------------g~~f~~ 321 (360)
...+.. .+......+.... ++...++-.. ...+ .++.+.....|..+.. |..++.
T Consensus 316 l~~i~~~~~~~~~~G~~~~~-------~~~~~~~~~~-~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~ 387 (428)
T KOG1549|consen 316 LMGIGQSLPEVTLNGSGKSR-------YPGLVSLSFP-YVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDL 387 (428)
T ss_pred HHHHhhhCchhhccCCcccc-------cccceeeecc-cccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhh
Confidence 554433 3333332222111 0111111111 0011 1111111111221111 111222
Q ss_pred CCCeEEEEecC--ChHHHHHHHHHHHHHHhchhc
Q 018172 322 DAKYARVSMLS--REEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 322 ~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~~ 353 (360)
...++|||++. +++|++.+++.+.+.+...+.
T Consensus 388 ~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~~ 421 (428)
T KOG1549|consen 388 AHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLRE 421 (428)
T ss_pred hcceeEEeeeeeCcHHHHHHHHHHHHHHHHhccc
Confidence 35689999977 899999999999999987653
No 219
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.85 E-value=6.6e-20 Score=174.90 Aligned_cols=276 Identities=13% Similarity=0.080 Sum_probs=187.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc--CCCCCCCceEEEeCCCCCCcHHHHHHh---CCe---
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS--SPGGPEPISVVSAAPYYSQYPAETDYL---RSG--- 110 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~--~~gd~~~~~vl~~~p~~~~~~~~~~~~---g~~--- 110 (360)
.+|++++++++.. .++|++++|+++++..+++... ...++ |+..+++|......+... +..
T Consensus 91 ~~lae~l~~~~~~-------~~~v~~~~sGseA~e~Alk~ar~~~gr~~----ii~~~~~yhG~~~~~~~~~~~~~~~~~ 159 (423)
T TIGR00713 91 ILLAKEIISRVPS-------VEMVRFVNSGTEATMSAVRLARGYTGRDK----IIKFEGCYHGHHDALLVKAGSGAATLG 159 (423)
T ss_pred HHHHHHHHHhCCc-------ccEEEEeCCHHHHHHHHHHHHHHhhCCCE----EEEEcCCCCCChhhhhccccCcccccC
Confidence 7777777776642 2589999999999999888653 22344 999999999976433321 110
Q ss_pred --------------eeeecC-Ccccccc-----CCCeeEEEE-cCCCCCCcccch-----HHHHHHhhhcCcEEEEeecc
Q 018172 111 --------------LYKWDG-DANTFDK-----NNGAYIEVV-NSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAY 164 (360)
Q Consensus 111 --------------~~~~~~-~~~~~~~-----~~~~~~i~~-~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay 164 (360)
...++. |.+.++. ..++++|++ +.|+| +|.+.+ +.+.++|+++|+++|+||+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~ 238 (423)
T TIGR00713 160 LPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVM 238 (423)
T ss_pred CCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccc
Confidence 111111 2222221 146778877 58888 898876 35678999999999999999
Q ss_pred cCCCCCcC-----CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHH---HHhhccccCChHHHHHHHHHhccc
Q 018172 165 YWPQYTPI-----TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTR---FIELGSIGVSKESQLRAAKILGIV 236 (360)
Q Consensus 165 ~~~~~~~~-----~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~ 236 (360)
.+...... .+. ..+ +.+|||.++ +|+|+||+++ ++++++.+.. .....+++.++++|.++.++++.+
T Consensus 239 ~g~r~g~~~~~~~~~~-~pD--i~t~sK~l~-~G~pig~v~~-~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~ 313 (423)
T TIGR00713 239 TGFRVALGGAQEYFGV-EPD--LTTLGKIIG-GGLPVGAFGG-RREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLL 313 (423)
T ss_pred cccccCcchhHHHhCC-Ccc--hhhhhhhhc-CCCceeeeeE-HHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHH
Confidence 74322111 111 112 348999999 9999999999 7899988863 223456789999999999999876
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccC-----------Cch---HHH
Q 018172 237 SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLES-----------KED---EDC 302 (360)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~---~~~ 302 (360)
.+. ...++.++...++++.+.+.+++++........|.+.. +++.. ++. ..+
T Consensus 314 ~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~------------v~~~~~~~~~~~~~~~~~~~~~~~~ 379 (423)
T TIGR00713 314 DEE--GVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFS------------LFFTEEEVTNYADAKKSDTELFAKF 379 (423)
T ss_pred hcc--cHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEE------------EEEecCCCCChhhhhcccHHHHHHH
Confidence 554 57888888888888888888888753322222333321 22221 111 345
Q ss_pred HHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 303 EKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 303 ~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
.+.|.++||.+.++ .| +.+|++...+++++++++++|.+++.+
T Consensus 380 ~~~l~~~Gv~v~~~-~~----~~~~l~~~~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 380 FHEMLDKGVFLPPS-QF----EACFLSAAHTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred HHHHHHCCeEEecC-Cc----cceeeECCCCHHHHHHHHHHHHHHHhh
Confidence 66677899998753 22 357898877999999999999998854
No 220
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.85 E-value=7.3e-19 Score=165.43 Aligned_cols=281 Identities=16% Similarity=0.083 Sum_probs=187.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
.++|++++++++. . +.++++|+|+++..++.++ +++||+ |+++.|+|.++...+...|++++.++++
T Consensus 32 ~~le~~la~~~g~-------~-~~v~~~sgt~al~~~l~al~~~~Gd~----Viv~~~~~~~~~~~~~~~G~~~~~~~~~ 99 (380)
T TIGR03588 32 PAFEEALAEYVGA-------K-YAVAFNSATSALHIACLALGVGPGDR----VWTTPITFVATANCALYCGAKVDFVDID 99 (380)
T ss_pred HHHHHHHHHHHCC-------C-eEEEEcCHHHHHHHHHHHcCCCCCCE----EEeCCcchHHHHHHHHHcCCEEEEEecC
Confidence 9999999999995 3 3556667899999999998 789998 9999999999999999999999998876
Q ss_pred cccccc---------C----CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC-CcCC-CC-CCccE
Q 018172 118 ANTFDK---------N----NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY-TPIT-GA-ADHDI 180 (360)
Q Consensus 118 ~~~~~~---------~----~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~-~~~~-~~-~~~~i 180 (360)
.+.... + +++++|++ +|++|...+ +.+.++|+++|+++|+|++|+.+.. .... +. ...++
T Consensus 100 ~~~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~ 176 (380)
T TIGR03588 100 PDTGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADA 176 (380)
T ss_pred CCcCCcCHHHHHHHhhcccCCCceEEEE---eCCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccce
Confidence 432211 3 57888884 457898877 6778888889999999999986432 1111 11 13478
Q ss_pred EEeccc--cccCCCCceEEEEeecCHHHHHHHHHHHhhcccc---------------------CC-hHHHHHHHHHhccc
Q 018172 181 MLFTLS--KCTGHAGSRIGWALVKDTEVARKMTRFIELGSIG---------------------VS-KESQLRAAKILGIV 236 (360)
Q Consensus 181 ~~~S~s--K~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~---------------------~~-~~~~~~~~~~l~~~ 236 (360)
.++|++ |.++. | ..|++++.++++.+.++..+..+... .+ .+....++-.+..+
T Consensus 177 ~~~S~~~~K~~~~-~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL 254 (380)
T TIGR03588 177 TVFSFHPVKIITT-A-EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQL 254 (380)
T ss_pred EEEecCCCCcccc-c-CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHH
Confidence 888887 87763 3 46888887888888887654322110 00 11111111122211
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCC-CcccccccccCCCCCCcccccCC---chHHHHHHHHhhCee
Q 018172 237 SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYP-LEYCNFTGKFTNSHPGFAWLESK---EDEDCEKLLRAERIM 312 (360)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gI~ 312 (360)
+.+++..++-+++.+++.+.|.+++++....+. +....+. .+.+.+... +.+.+.+.|.++||.
T Consensus 255 -----~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~r~~l~~~L~~~gI~ 322 (380)
T TIGR03588 255 -----KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWH-------LYPILLDQEFGCTRKEVFEALRAAGIG 322 (380)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEE-------EEEEEECCcCCCCHHHHHHHHHHCCCC
Confidence 335667777777888888899888765543221 1110000 001222221 238888889999999
Q ss_pred eeCCCCC-----------CC--C-------CCeEEEEecC--ChHHHHHHHHHHHHHH
Q 018172 313 ARGGRRF-----------GA--D-------AKYARVSMLS--REEIFNIFLERLSAIQ 348 (360)
Q Consensus 313 ~~pg~~f-----------~~--~-------~~~~R~s~~~--~~e~~~~~~~~l~~~~ 348 (360)
+++.... .. . ...+++.+.. ++++++..+++|++++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 323 VQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred cccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 8753211 00 0 1457887754 8999999999998874
No 221
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.85 E-value=7.9e-19 Score=161.47 Aligned_cols=274 Identities=18% Similarity=0.158 Sum_probs=198.3
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC-
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG- 116 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~- 116 (360)
+.+|++.+|+|+|. ++.+++++| -.++..++.+|.+++|. |+..+-.|-+....+++.+++++.++-
T Consensus 86 h~~LE~~lA~f~g~-------e~al~f~SG-y~AN~~~i~~l~~~~dl----i~~D~lnHASiidG~rls~a~~~~f~Hn 153 (388)
T COG0156 86 HVELEEELADFLGA-------EAALLFSSG-FVANLGLLSALLKKGDL----IFSDELNHASIIDGIRLSRAEVRRFKHN 153 (388)
T ss_pred HHHHHHHHHHHhCC-------CcEEEEccc-chhHHHHHHHhcCCCcE----EEEechhhhhHHHHHHhCCCcEEEecCC
Confidence 38999999999994 545666665 77888999999999997 889999999999999999999998863
Q ss_pred Ccccccc---C---C--CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC----cCC---C--CCCc
Q 018172 117 DANTFDK---N---N--GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT----PIT---G--AADH 178 (360)
Q Consensus 117 ~~~~~~~---~---~--~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~----~~~---~--~~~~ 178 (360)
|.+.++. . . +.++|+....-...|.+.+ +.+.+++++|+.++++||+|+.+.+. .+. + ..+.
T Consensus 154 D~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~v 233 (388)
T COG0156 154 DLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEV 233 (388)
T ss_pred CHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccc
Confidence 3343332 1 1 4678888888888999988 78889999999999999999953222 121 2 2445
Q ss_pred cEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhcccc--CChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHH
Q 018172 179 DIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIG--VSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWN 256 (360)
Q Consensus 179 ~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 256 (360)
+|.++||+|+||..| ||+.+ +..+++.+.+......++ .++....++.++++.+ ......+++++++..
T Consensus 234 di~~gTlsKAlGs~G---g~v~g-~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l-----~~~~~~r~~L~~~~~ 304 (388)
T COG0156 234 DIIVGTLGKALGSSG---GYIAG-SAALIDYLRNRARPFIFSTALPPAVAAAALAALRIL-----EEGPERRERLQELAA 304 (388)
T ss_pred eEEEEEchhhhcccC---ceeeC-cHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHH-----HhCHHHHHHHHHHHH
Confidence 899999999999888 99988 899999998764433333 4444444455566644 344567777888888
Q ss_pred HHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCC--CCCeEEEEec
Q 018172 257 MLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGA--DAKYARVSML 331 (360)
Q Consensus 257 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~--~~~~~R~s~~ 331 (360)
++.+.++..+. .+ .+ +.+..+.+-+.+. ......|.++||++.+..+.-. +...+|++++
T Consensus 305 ~~~~~~~~~~~-~~-~~-------------s~s~I~pv~~gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lt 369 (388)
T COG0156 305 FFRSLLKALGL-VL-LP-------------SESPIIPVILGDEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLT 369 (388)
T ss_pred HHHHHHHhcCC-cc-CC-------------CCCCeeeeEeCCHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEec
Confidence 88866666542 21 11 1122445555553 4455556666999987554432 3467999997
Q ss_pred C--ChHHHHHHHHHHHHH
Q 018172 332 S--REEIFNIFLERLSAI 347 (360)
Q Consensus 332 ~--~~e~~~~~~~~l~~~ 347 (360)
. ++++++++++++.++
T Consensus 370 a~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 370 AAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCCCHHHHHHHHHHHHhh
Confidence 7 999999999999875
No 222
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.85 E-value=5.9e-19 Score=164.43 Aligned_cols=278 Identities=16% Similarity=0.077 Sum_probs=188.9
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG 116 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 116 (360)
..+++++++++++. + ++++++|+|+++..++..+ .++||+ |+++.++|..+...+...|++++.++.
T Consensus 20 ~~~~~~~la~~~~~-------~-~~~~~~sgt~al~~~l~~l~~~~gd~----vl~~~~~~~~~~~~~~~~g~~~~~~~~ 87 (352)
T cd00616 20 VREFEKAFAEYLGV-------K-YAVAVSSGTAALHLALRALGIGPGDE----VIVPSFTFVATANAILLLGATPVFVDI 87 (352)
T ss_pred HHHHHHHHHHHhCC-------C-eEEEECCHHHHHHHHHHHcCCCCCCE----EEeCCcchHHHHHHHHHcCCeEEEEec
Confidence 39999999999984 3 5788889999999999998 588998 999999999999999999999998877
Q ss_pred Ccccccc---------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCC-CCCCccEEEecc
Q 018172 117 DANTFDK---------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPIT-GAADHDIMLFTL 185 (360)
Q Consensus 117 ~~~~~~~---------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~-~~~~~~i~~~S~ 185 (360)
+.+.+.. ++++++|+++ ||+|...+ +.+.++|+++|+++|+|++|+.+...... -....++.+.|+
T Consensus 88 ~~~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~ 164 (352)
T cd00616 88 DPDTYNIDPELIEAAITPRTKAIIPV---HLYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSF 164 (352)
T ss_pred CCCcCCcCHHHHHHhcCcCCeEEEEE---CCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcC
Confidence 6422221 3578888875 47998877 67888898899999999999854332111 011135778887
Q ss_pred c--cccCCCCceEEEEeecCHHHHHHHHHHHhhcccc------------CChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 186 S--KCTGHAGSRIGWALVKDTEVARKMTRFIELGSIG------------VSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 186 s--K~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
+ |.++ +-+.|++++.++++.+.+.......... ...+....++..+.. ...+++..++.
T Consensus 165 ~~~K~~~--~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~-----l~~~~~~~~~~ 237 (352)
T cd00616 165 HPTKNLT--TGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQ-----LEKLDEIIARR 237 (352)
T ss_pred CCCCCCc--ccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHH-----HHhhHHHHHHH
Confidence 6 8774 3346888886678888876654322111 011112222222211 14567777888
Q ss_pred HHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-----chHHHHHHHHhhCeeeeCCCCCC------
Q 018172 252 SERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-----EDEDCEKLLRAERIMARGGRRFG------ 320 (360)
Q Consensus 252 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gI~~~pg~~f~------ 320 (360)
+++.+++.+.|++++++.+..+.... ......+.+.++ +...+.+.|+++||.+......-
T Consensus 238 ~~~~~~~~~~L~~~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~ 309 (352)
T cd00616 238 REIAERYKELLADLPGIRLPDVPPGV--------KHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYPPLHHQPPY 309 (352)
T ss_pred HHHHHHHHHHhcCCCCccCCCCCCCC--------ceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeecCccccCHhh
Confidence 88999999999998777765443210 001112333343 23788888999999765321110
Q ss_pred ---------CC-------CCeEEEEecC--ChHHHHHHHHHHH
Q 018172 321 ---------AD-------AKYARVSMLS--REEIFNIFLERLS 345 (360)
Q Consensus 321 ---------~~-------~~~~R~s~~~--~~e~~~~~~~~l~ 345 (360)
.. .+.+|+++.. ++||+++++++|+
T Consensus 310 ~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 310 KKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred hhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 00 2579999865 9999999998874
No 223
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.85 E-value=4.6e-19 Score=166.73 Aligned_cols=272 Identities=14% Similarity=0.088 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc--------------CCCCCCCceEEEeCCCCCCcHHHH
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS--------------SPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~--------------~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
.+|++++++|++. + ..++.+++..+...++.+|. +.++. |+...-+|.++...+
T Consensus 150 ~~LE~~LA~f~g~-------e-~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~----i~~D~~~HaSI~dG~ 217 (476)
T PLN02955 150 RLLESSLADLKKK-------E-DCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVA----IFSDALNHASIIDGV 217 (476)
T ss_pred HHHHHHHHHHHCC-------C-cEEEECChHHHHHHHHHHHhhccccccccccccCCCCcE----EEEeccchHHHHHHH
Confidence 8899999999994 4 45555556777777777762 33444 788888899999999
Q ss_pred HHh----CCeeeeecC-Ccccccc-----CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCc--
Q 018172 105 DYL----RSGLYKWDG-DANTFDK-----NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTP-- 171 (360)
Q Consensus 105 ~~~----g~~~~~~~~-~~~~~~~-----~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~-- 171 (360)
++. +++++.++- |.+.++. ..+.++|++....++.|.+.+ +++.++|+++|.++|+||+|+.+.+..
T Consensus 218 ~ls~~~~~a~~~~f~HND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G 297 (476)
T PLN02955 218 RLAERQGNVEVFVYRHCDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENG 297 (476)
T ss_pred HhccccCCceEEEeCCCCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCC
Confidence 886 577777653 4444432 234466777777889999988 788888988999999999998532211
Q ss_pred --CC----CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhcccc--CChHHHHHHHHHhcccCCCchhH
Q 018172 172 --IT----GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIG--VSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 172 --~~----~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
.. -..+.+++++||||++|..| ||+++ +.++++.++.......++ .++....++.++++.+...
T Consensus 298 ~G~~e~~g~~~di~ii~~TLsKA~G~~G---Gfi~g-s~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~---- 369 (476)
T PLN02955 298 GGVAEEFNCEADVDLCVGTLSKAAGCHG---GFIAC-SKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKE---- 369 (476)
T ss_pred CcHHHHhCCCCCCcEEEEeCccchhccC---ceeec-HHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcC----
Confidence 11 13577899999999998777 99988 788999888655433333 2223333343455543221
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFG 320 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~ 320 (360)
...+++++++.+++.+.+ ++.+.. ..+.+.+.+. ..+.+.|.++||.+.+..+..
T Consensus 370 -~~~r~~L~~n~~~fr~~~----G~~~~s-----------------PI~pI~ig~~~~a~~~~~~L~~~Gi~v~~i~yPt 427 (476)
T PLN02955 370 -KWRRKAIWERVKEFKALS----GVDISS-----------------PIISLVVGNQEKALKASRYLLKSGFHVMAIRPPT 427 (476)
T ss_pred -HHHHHHHHHHHHHHHHhc----CCCCCC-----------------CEEEEEeCCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 235667777777776632 222211 1333444443 556888889999998755443
Q ss_pred C--CCCeEEEEecC--ChHHHHHHHHHHHHHHhchh
Q 018172 321 A--DAKYARVSMLS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 321 ~--~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
. ....+|++++. ++||+++++++|.++.....
T Consensus 428 VP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~ 463 (476)
T PLN02955 428 VPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDN 463 (476)
T ss_pred CCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 3 23469999966 99999999999999876543
No 224
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.84 E-value=2.6e-19 Score=169.78 Aligned_cols=261 Identities=14% Similarity=0.101 Sum_probs=172.3
Q ss_pred CcEEEcCChHHHHHHHHHhhcC---------CCCCCCceEEEeCCCCCCcHHHHHHhCC-------------eeeeec-C
Q 018172 60 RHIVIGTGSTQLYQAALYALSS---------PGGPEPISVVSAAPYYSQYPAETDYLRS-------------GLYKWD-G 116 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~---------~gd~~~~~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~-~ 116 (360)
+.+++++++++++..++..+.. +|. .+|++..-+|......+...+. .+..++ .
T Consensus 99 ~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~---~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (401)
T PRK00854 99 HKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQ---AEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFG 175 (401)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCC---ceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCC
Confidence 4799999999999999998852 121 1377777666655433322221 122222 2
Q ss_pred Ccccccc--CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCc--CC---CCCCccEEEec
Q 018172 117 DANTFDK--NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTP--IT---GAADHDIMLFT 184 (360)
Q Consensus 117 ~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~--~~---~~~~~~i~~~S 184 (360)
|.+.++. ++++++|++++|+||+|.+++ +.+.++|+++|+++|+||+|.+..... .. .....++.+
T Consensus 176 d~~~le~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~-- 253 (401)
T PRK00854 176 DAEALEAAITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTL-- 253 (401)
T ss_pred CHHHHHHHhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEE--
Confidence 3333332 457999999999999999986 356678999999999999998322211 10 111224444
Q ss_pred cccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 018172 185 LSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQ 264 (360)
Q Consensus 185 ~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 264 (360)
++|.++-..+|+||+++ ++++++.+.......+++.+++.+.++.+.|+.+.+ +...+.++++.+++.+.|++
T Consensus 254 ~~K~l~gg~~~ig~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~------~~~~~~~~~~~~~l~~~L~~ 326 (401)
T PRK00854 254 IGKALSGGFYPVSAVLS-NSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTE------EGMIENAAEMGAYFLEGLRS 326 (401)
T ss_pred ecccccCCccCeEEEEE-cHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHH------cCHHHHHHHHHHHHHHHHHh
Confidence 36999833379999999 888888886544445667899999999998875421 23567788888999999988
Q ss_pred cCCcccCCCCCcccccccccCCCCCCcccccC-Cc---hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec--CChHHHH
Q 018172 265 SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLES-KE---DEDCEKLLRAERIMARGGRRFGADAKYARVSML--SREEIFN 338 (360)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~--~~~e~~~ 338 (360)
++...+.... +.+.++.+.+ ++ ...+.+.|.++||.+.+. ..+++|+++. .++++++
T Consensus 327 ~~~~~~~~~~------------g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v~~~-----~~~~lR~~p~~~~t~e~i~ 389 (401)
T PRK00854 327 IRSNIVREVR------------GRGLMLAVELEPEAGGARQYCEALKERGLLAKDT-----HDHTIRLAPPLVITREQVD 389 (401)
T ss_pred hccCceEEEe------------ccceEEEEEEecCchhHHHHHHHHHHCCeEEecC-----CCCEEEEeCCcccCHHHHH
Confidence 7422111111 1122222222 21 256677777889998752 2469999963 4999999
Q ss_pred HHHHHHHHHHh
Q 018172 339 IFLERLSAIQG 349 (360)
Q Consensus 339 ~~~~~l~~~~~ 349 (360)
+++++|++++.
T Consensus 390 ~~i~~l~~~l~ 400 (401)
T PRK00854 390 WALEQIAKVLA 400 (401)
T ss_pred HHHHHHHHHhh
Confidence 99999998863
No 225
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.84 E-value=3.2e-19 Score=169.94 Aligned_cols=265 Identities=11% Similarity=0.014 Sum_probs=180.5
Q ss_pred cEEEcCChHHHHHHHHHhhcC--CCCCCCceEEEeCCCCCCcHHHHHHhCCeeee----------------ecCCccc--
Q 018172 61 HIVIGTGSTQLYQAALYALSS--PGGPEPISVVSAAPYYSQYPAETDYLRSGLYK----------------WDGDANT-- 120 (360)
Q Consensus 61 ~i~~t~G~t~~l~~~~~~l~~--~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~----------------~~~~~~~-- 120 (360)
.+++++++++++..+++.... .... |+.-.++|......+...+..... ++.+.++
T Consensus 104 ~~~f~~sGsea~e~Alklar~~~~r~~----iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 179 (425)
T PRK08088 104 KTLLVTTGSEAVENAVKIARAATKRSG----VIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVS 179 (425)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhCCCe----EEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCcc
Confidence 677777777877777665531 1222 777799999888776665433111 2211111
Q ss_pred -------ccc-------CCCeeEEEEc-CCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCCCc-CC--CCCCc
Q 018172 121 -------FDK-------NNGAYIEVVN-SPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQYTP-IT--GAADH 178 (360)
Q Consensus 121 -------~~~-------~~~~~~i~~~-~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~~~-~~--~~~~~ 178 (360)
++. ..+..++++. ..+|+.....+ +.+.++|+++|+++|+||+|.+..... .. ...+.
T Consensus 180 ~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~ 259 (425)
T PRK08088 180 EDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGV 259 (425)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCC
Confidence 111 1234455543 33566555555 467788999999999999998532221 11 13344
Q ss_pred cEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 179 DIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 179 ~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
+..+.||||.++ +|+|+||+++ +.++++.+.......+++.+++.|.++.++++..... .++++.++..+++++.+
T Consensus 260 ~pdi~s~sK~l~-~G~rig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~--~~~~~~~~~~~~~~~~l 335 (425)
T PRK08088 260 AADLTTFAKSIA-GGFPLAGVTG-RAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQE--NLLQKANALGEKLKDGL 335 (425)
T ss_pred CCCEEEEecccc-CCCcceeeEe-cHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHH
Confidence 556899999999 9999999999 8999999877666678889999999999999865443 77788887777766666
Q ss_pred HHHHHhcCCcccCCCCCcccccccccCCCCCCcccccC--------Cch---HHHHHHHHhhCeeeeCCCCCCCCCCeEE
Q 018172 259 RQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLES--------KED---EDCEKLLRAERIMARGGRRFGADAKYAR 327 (360)
Q Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R 327 (360)
.+.+..++.+..+. +.+.++|+.+ ++. ..+...+.++||.+.|+..+ .+.+|
T Consensus 336 ~~l~~~~~~~~~v~--------------g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~---~~~iR 398 (425)
T PRK08088 336 LAIAEKHPEIGDVR--------------GLGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPY---YNVLR 398 (425)
T ss_pred HHHHHhCCCeEEEe--------------ccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCC---CCEEE
Confidence 66656665322221 2244677776 222 55677778899998876544 36899
Q ss_pred EEecC--ChHHHHHHHHHHHHHHhc
Q 018172 328 VSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 328 ~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
|+++. +++++++++++|.+++..
T Consensus 399 l~~~~~~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 399 ILVPLTIEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred EECCCCcCHHHHHHHHHHHHHHHHh
Confidence 99974 899999999999999875
No 226
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.84 E-value=4.8e-19 Score=180.29 Aligned_cols=291 Identities=12% Similarity=0.026 Sum_probs=206.0
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCC-cEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHHHH---HhCCeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGR-HIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAETD---YLRSGLY 112 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~-~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~~---~~g~~~~ 112 (360)
+.+.|+.+++|++. .+++ +|++|+|+|+++++++.++ +++||+ |+++.-.|.+.....+ ..|++++
T Consensus 80 ~e~aR~~ia~~lga-----~~~~~~VvFtsnaT~alnlva~~l~~~~gd~----Iv~t~~eH~svl~~~~~a~~~G~~v~ 150 (805)
T PLN02724 80 IESARQQVLEYFNA-----PPSDYACVFTSGATAALKLVGETFPWSSESH----FCYTLENHNSVLGIREYALEKGAAAI 150 (805)
T ss_pred HHHHHHHHHHHhCC-----CccceEEEEeCChHHHHHHHHHHCCCCCCCe----EEEeeccccchHHHHHHHHHcCCeEE
Confidence 48899999999996 1333 5899999999999999988 778888 9999888887765543 3488888
Q ss_pred eecCC--------cc--------cccc------------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhc--------C
Q 018172 113 KWDGD--------AN--------TFDK------------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSA--------E 155 (360)
Q Consensus 113 ~~~~~--------~~--------~~~~------------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~--------~ 155 (360)
.++++ .+ .+.. ++++++|.+++.+|-||.++| +++..+++.. +
T Consensus 151 ~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~ 230 (805)
T PLN02724 151 AVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGR 230 (805)
T ss_pred eccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcc
Confidence 87765 11 1111 145689999999999999999 5555555522 3
Q ss_pred cEEEEeecccCCCCCcCCCCCCccEEEeccccccC-CCCceEEEEeecCHHHHHHHHHHH--------------------
Q 018172 156 GKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCTG-HAGSRIGWALVKDTEVARKMTRFI-------------------- 214 (360)
Q Consensus 156 ~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~~~~~~~~~~~~l~~~~-------------------- 214 (360)
+++++|.+++.++.+......+.++++.|++|.+| +.| +|+++. .+++.+.+....
T Consensus 231 ~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G--~G~L~v-r~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~ 307 (805)
T PLN02724 231 WMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPTG--LGALLV-RRDAAKLLKKKYFGGGTVAASIADIDFVKRRE 307 (805)
T ss_pred eEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCCC--ceEEEE-ehhhhhhhcCCccCCCceEEEecccceeeccc
Confidence 57999999998887766677889999999999998 556 888888 566666554321
Q ss_pred ----hhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC------CcccCCCCCccccccccc
Q 018172 215 ----ELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSG------VFGLPEYPLEYCNFTGKF 284 (360)
Q Consensus 215 ----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~------~~~~~~~~~~~~~~~~~~ 284 (360)
.+...+.|.+...++.++++.+.. -.++++.++..+..+++.+.|++++ ++.+..+.... .+
T Consensus 308 ~~~~rfE~GT~n~~~i~~l~aal~~l~~---ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~---~~-- 379 (805)
T PLN02724 308 RVEQRFEDGTISFLSIAALRHGFKLLNR---LTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFK---LE-- 379 (805)
T ss_pred cHHHHhcCCCcchhHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCC---CC--
Confidence 112234566666677777776543 3578889999999999999999885 34444332100 00
Q ss_pred CCCCCCcccccCCc-------hHHHHHHHHhhCeeeeCCCCCCC----------------------------------CC
Q 018172 285 TNSHPGFAWLESKE-------DEDCEKLLRAERIMARGGRRFGA----------------------------------DA 323 (360)
Q Consensus 285 ~~~~~~~~~~~~~~-------~~~~~~~l~~~gI~~~pg~~f~~----------------------------------~~ 323 (360)
....+..+.+.+.+ ..++..++.++||.++.|..+.. ..
T Consensus 380 ~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~ 459 (805)
T PLN02724 380 FHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPT 459 (805)
T ss_pred cccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCccc
Confidence 00111223333322 15577778888999998865421 13
Q ss_pred CeEEEEecC--ChHHHHHHHHHHHHHH
Q 018172 324 KYARVSMLS--REEIFNIFLERLSAIQ 348 (360)
Q Consensus 324 ~~~R~s~~~--~~e~~~~~~~~l~~~~ 348 (360)
+.+|+|++. +.||+++++++|++..
T Consensus 460 G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 460 GAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred ceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 789999977 9999999999999965
No 227
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=1.4e-18 Score=161.96 Aligned_cols=236 Identities=10% Similarity=0.059 Sum_probs=163.0
Q ss_pred HHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH----HHHHhCCeeeeec
Q 018172 40 ELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA----ETDYLRSGLYKWD 115 (360)
Q Consensus 40 ~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~----~~~~~g~~~~~~~ 115 (360)
.|++.++.+.+ .++.+++++ +++++..++..++++||+ |++++|.|+++.. .++..|+++..++
T Consensus 68 ~Le~~la~le~-------~~~~v~~sS-G~aAi~~~l~all~~GD~----Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd 135 (395)
T PRK05967 68 ALCKAIDALEG-------SAGTILVPS-GLAAVTVPFLGFLSPGDH----ALIVDSVYYPTRHFCDTMLKRLGVEVEYYD 135 (395)
T ss_pred HHHHHHHHHhC-------CCCEEEECc-HHHHHHHHHHHhcCCCCE----EEEccCCcHHHHHHHHHHHHhcCeEEEEeC
Confidence 56666666554 334555555 689999999999999999 9999999999875 4567899998886
Q ss_pred CCc-ccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccccccC-
Q 018172 116 GDA-NTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCTG- 190 (360)
Q Consensus 116 ~~~-~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~~- 190 (360)
.+. +.+.. +++||+|++++|+||++...+ +.+.++|+++|+++|+|++|..+- ..-+...+.++++.|.+|.++
T Consensus 136 ~~~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~-~~~pl~~GaDivv~S~tKy~~G 214 (395)
T PRK05967 136 PEIGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPL-YFRPLDFGVDISIHAATKYPSG 214 (395)
T ss_pred CCCHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCce-ecChhHcCCCEEEEecccccCC
Confidence 543 33433 567999999999999998888 778888888999999999998532 122345688999999999864
Q ss_pred CCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q 018172 191 HAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGL 270 (360)
Q Consensus 191 ~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 270 (360)
..+.-.|+++. ++++.+.+.......+.+.++.....+...++ . +.-..++..++...+.+.|.+++.+..
T Consensus 215 h~d~~~G~v~~-~~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~-------T-l~lR~~~~~~na~~lA~~L~~hp~v~~ 285 (395)
T PRK05967 215 HSDILLGTVSA-NEKCWPQLLEAHGTLGLCAGPDDTYQILRGLR-------T-MGIRLEHHRKSALEIARWLEGRPDVAR 285 (395)
T ss_pred CCCeeEEEEEc-CHHHHHHHHHHHHHcCCCCCHHHHHHHHcCcc-------c-HHHHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 34566787766 67777777655555556666666554433332 2 333344446666778899999987765
Q ss_pred CCCCCcc----cccccccCCCCCCcccccCC
Q 018172 271 PEYPLEY----CNFTGKFTNSHPGFAWLESK 297 (360)
Q Consensus 271 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 297 (360)
+.+++-. +........+.+..+.+.++
T Consensus 286 V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 316 (395)
T PRK05967 286 VLHPALPSFPGHEIWKRDFSGASGIFSFVLA 316 (395)
T ss_pred EECCCCCCCccHHHHHHhCCCCceEEEEEEc
Confidence 4444311 11111111234456777775
No 228
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=1.5e-18 Score=164.41 Aligned_cols=294 Identities=12% Similarity=0.076 Sum_probs=190.9
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH----HHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET----DYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~----~~~g~~~~~ 113 (360)
..+|++.++++.+. + ..++|+++++++++++.+++++||+ |+++...|......+ ...|++++.
T Consensus 66 ~~~le~~lA~l~g~-------~-~av~~sSGt~Al~~al~~ll~~Gd~----Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~ 133 (433)
T PRK08134 66 VAVLEERVAALEGG-------V-GAIATASGQAALHLAIATLMGAGSH----IVASSALYGGSHNLLHYTLRRFGIETTF 133 (433)
T ss_pred HHHHHHHHHHHhCC-------C-cEEEeCCHHHHHHHHHHHHhCCCCE----EEEeCCccHHHHHHHHHHHhhCCeEEEE
Confidence 48999999999985 3 4688999999999999999999998 999999998775554 447999999
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+ .+.+.. +++|++|++.+|+||+|.+.+ +.+.++|+++|+++|+|.++..+... .+-..+.++++.|.+|.+
T Consensus 134 vd~~d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~-~pl~~GaD~vv~S~tK~l 212 (433)
T PRK08134 134 VKPGDIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLL-RPFEHGADLVYHSATKFL 212 (433)
T ss_pred ECCCCHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccC-CchhcCCCEEEecccccc
Confidence 8764 344443 578999999999999999999 78888899899999999999865432 233678899999999999
Q ss_pred CCCCceEEEEeecCHH--------------------------------HHHHHH-HHHhhccccCChHHHHHHHHHhccc
Q 018172 190 GHAGSRIGWALVKDTE--------------------------------VARKMT-RFIELGSIGVSKESQLRAAKILGIV 236 (360)
Q Consensus 190 ~~~G~r~G~~~~~~~~--------------------------------~~~~l~-~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (360)
+.+|-.+|.++..... +....+ ......+...++... ..++..+
T Consensus 213 ~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A---~l~~~gL 289 (433)
T PRK08134 213 GGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNA---WQLLQGI 289 (433)
T ss_pred CCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHH---HHHhcCC
Confidence 8788777776552110 000011 011112223333333 3333332
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcc----cccccccC-CCCCCcccccCCch-HHHHHHHHhhC
Q 018172 237 SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEY----CNFTGKFT-NSHPGFAWLESKED-EDCEKLLRAER 310 (360)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~~~g 310 (360)
+-+....++-.++...+.+.|.+++.+..+.+++.. +....... .+.+..+.+.++++ +.+.+.+++-.
T Consensus 290 -----~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~~~~~~~~f~~~l~ 364 (433)
T PRK08134 290 -----ETLPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLKGGRAAGRKFIESLK 364 (433)
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEecCCHHHHHHHHHhCC
Confidence 334455555577777888889998876655444321 11111111 23456778888644 44444444434
Q ss_pred eee---eCCC----------------------CCCCCCCeEEEEecCChHHHHHHHHHHHHHHhchhcc
Q 018172 311 IMA---RGGR----------------------RFGADAKYARVSMLSREEIFNIFLERLSAIQGGSISN 354 (360)
Q Consensus 311 I~~---~pg~----------------------~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~~~ 354 (360)
+.. .-|. ..|..++.+|||++.+ +.+.+++.|.+.+++.+++
T Consensus 365 l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGlE--~~~dli~dl~~Al~~~~~~ 431 (433)
T PRK08134 365 LFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIGLE--DADDLIDDLKRALKAAEKA 431 (433)
T ss_pred cceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHhhhhc
Confidence 422 1111 1122356799999662 2445566666666654443
No 229
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.83 E-value=7.8e-19 Score=166.39 Aligned_cols=268 Identities=15% Similarity=0.081 Sum_probs=181.6
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-------CCCCCCceEEEeCCCCCCcHHHHHHhCCee-------------eeec-CCc
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-------PGGPEPISVVSAAPYYSQYPAETDYLRSGL-------------YKWD-GDA 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-------~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~-------------~~~~-~~~ 118 (360)
+.+++++++++++..+++.... ++. .+|+..+.+|......+..++... ..++ .|.
T Consensus 97 ~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r---~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 173 (406)
T PRK12381 97 DRVFFCNSGAEANEAALKLARKYAHDRYGSHK---SGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDL 173 (406)
T ss_pred CeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCC---CeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCH
Confidence 5899999999999999888631 122 248888888888765444333211 1121 122
Q ss_pred ccccc--CCCeeEEEEcCCCCCCcccc--h----HHHHHHhhhcCcEEEEeecccCCCCCc--CC-CCCCccEEEecccc
Q 018172 119 NTFDK--NNGAYIEVVNSPNNPDGTIR--E----AVLAKVNRSAEGKLIHDLAYYWPQYTP--IT-GAADHDIMLFTLSK 187 (360)
Q Consensus 119 ~~~~~--~~~~~~i~~~~p~NPtG~~~--~----~~~~~~~~~~~~~li~D~ay~~~~~~~--~~-~~~~~~i~~~S~sK 187 (360)
+.++. ++++.+|++ .|.|++|-++ + +.+.++|++||+++|+||+|.+..... .. ...+...-+.|++|
T Consensus 174 ~~l~~~l~~~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t~sK 252 (406)
T PRK12381 174 NSASALIDDQTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTAK 252 (406)
T ss_pred HHHHHhccCCeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEEehh
Confidence 22221 245667776 6999998654 2 467789999999999999996422111 11 11111111469999
Q ss_pred ccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018172 188 CTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGV 267 (360)
Q Consensus 188 ~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 267 (360)
.++ +|+|+||+++ ++++++.+.......+++.+++.+.++.+.++.+.+ ++.++.++++.+++.+.|+++..
T Consensus 253 ~l~-gG~~ig~~~~-~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~------~~~~~~~~~~~~~l~~~L~~l~~ 324 (406)
T PRK12381 253 ALG-GGFPIGAMLT-TEKCASVMTVGTHGTTYGGNPLASAVAGKVLELINT------PEMLNGVKQRHDWFVERLNTINA 324 (406)
T ss_pred hhh-CCCceEEEEE-cHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh------ccHHHHHHHHHHHHHHHHHHHHh
Confidence 999 8999999999 899998887654456678899999999998875432 24677788888888888877621
Q ss_pred -cccCCCCCcccccccccCCCCCCcccccCCc----h-HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec--CChHHHHH
Q 018172 268 -FGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----D-EDCEKLLRAERIMARGGRRFGADAKYARVSML--SREEIFNI 339 (360)
Q Consensus 268 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~--~~~e~~~~ 339 (360)
..+.. .+++.+.++++.+++ . ..+.+.|.++||.+.+. + ++.+||+++ .+++++++
T Consensus 325 ~~~~~~-----------~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~---g--~~~lRl~p~~~~t~~~i~~ 388 (406)
T PRK12381 325 RYGLFS-----------EIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIA---G--PNVVRFAPALNISEEEITT 388 (406)
T ss_pred hCCCEE-----------EEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeC---C--CCEEEEeCCccCCHHHHHH
Confidence 11100 112334466776643 2 56778888999999763 2 468999875 49999999
Q ss_pred HHHHHHHHHhchhccC
Q 018172 340 FLERLSAIQGGSISNG 355 (360)
Q Consensus 340 ~~~~l~~~~~~~~~~~ 355 (360)
++++|.+++.+..+++
T Consensus 389 ~~~~l~~~l~~~~~~~ 404 (406)
T PRK12381 389 GLDRFARACERFVSRG 404 (406)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999998765443
No 230
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.83 E-value=9.6e-20 Score=165.26 Aligned_cols=235 Identities=13% Similarity=0.041 Sum_probs=153.9
Q ss_pred HHHHHH-hcCCceeeecCCcccccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCC
Q 018172 4 EAFWRK-LGDKCTMVISGSDLMSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSP 82 (360)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~ 82 (360)
.+||.+ ...-..++.++.+.+ ..+.|. ..++++.++++++. ++.+++|+|+|+++..++.+++++
T Consensus 33 ~~~~~~~~~~~d~~~~~~~d~l---~~~~g~----i~~~~~~~A~~~ga-------~~~~~~~~Gst~a~~~~l~al~~~ 98 (294)
T cd00615 33 YEFYGENLFKADVTELTGLDDL---LDPTGP----IKEAQELAARAFGA-------KHTFFLVNGTSSSNKAVILAVCGP 98 (294)
T ss_pred HHHhccchhhcccCCCCCCCCC---CCCChH----HHHHHHHHHHHhCC-------CCEEEEcCcHHHHHHHHHHHcCCC
Confidence 345533 233344455554443 233443 59999999999995 345666999999999999999999
Q ss_pred CCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCCcc-------cccc---------CCCeeEEEEcCCCCCCcccch-H
Q 018172 83 GGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDAN-------TFDK---------NNGAYIEVVNSPNNPDGTIRE-A 145 (360)
Q Consensus 83 gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~---------~~~~~~i~~~~p~NPtG~~~~-~ 145 (360)
||+ |+++.|+|.+....+...|++++.++.+.+ +++. .++++++++++| ||+|.+++ +
T Consensus 99 gd~----Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~ 173 (294)
T cd00615 99 GDK----ILIDRNCHKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLR 173 (294)
T ss_pred CCE----EEEeCCchHHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHH
Confidence 998 999999999999999999999988765422 1111 257899999999 69999998 6
Q ss_pred HHHHHhhhcCcEEEEeecccC-----CCCCcCCCCCCccEEEeccccccCCCCceEEEEeecCHH--HHHHHHHHHh-hc
Q 018172 146 VLAKVNRSAEGKLIHDLAYYW-----PQYTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTE--VARKMTRFIE-LG 217 (360)
Q Consensus 146 ~~~~~~~~~~~~li~D~ay~~-----~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~--~~~~l~~~~~-~~ 217 (360)
.+.++|+++|+++|+|++|+. +..+......+.++++.|++|++ +|++.|+++..+.+ ..+.+..... ..
T Consensus 174 ~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~div~~S~hK~l--~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 251 (294)
T cd00615 174 KIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGADIVVQSTHKTL--PALTQGSMIHVKGDLVNPDRVNEALNLHQ 251 (294)
T ss_pred HHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCCcEEEEchhccc--chHhHHHHHHhCCCcCCHHHHHHHHHHHC
Confidence 788888889999999999974 11222223457899999999975 57776554331222 1223322222 22
Q ss_pred cccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 018172 218 SIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIR 263 (360)
Q Consensus 218 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 263 (360)
+.+++.+...++..++..+. .+.++..+++.++.+.+++.|+
T Consensus 252 ttsps~~~~asl~~a~~~~~----~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 252 STSPSYLILASLDVARAMMA----LEGKELVEELIELALYARQEIN 293 (294)
T ss_pred CCCcHHHHHHHHHHHHHHHH----HHhHHHHHHHHHHHHHHHHHHh
Confidence 33444444444444444331 2233344445555555555543
No 231
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.83 E-value=8.3e-19 Score=166.30 Aligned_cols=264 Identities=12% Similarity=0.031 Sum_probs=168.1
Q ss_pred CcEEEcCChHHHHHHHHHhhcCC-----C-CCCCceEEEeCCCCCCcHHH-HHHhCCe------------eeeecC-Ccc
Q 018172 60 RHIVIGTGSTQLYQAALYALSSP-----G-GPEPISVVSAAPYYSQYPAE-TDYLRSG------------LYKWDG-DAN 119 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~~-----g-d~~~~~vl~~~p~~~~~~~~-~~~~g~~------------~~~~~~-~~~ 119 (360)
+.+++++++++++..++..+... | .+.+.+|+..+-+|...... +...+.. +..++. |.+
T Consensus 89 ~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 168 (400)
T PTZ00125 89 DKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVE 168 (400)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHH
Confidence 47889999999999999877411 0 00012388777777665433 3322211 111211 223
Q ss_pred cccc---CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCC--cC-C--CCCCccEEEeccc
Q 018172 120 TFDK---NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYT--PI-T--GAADHDIMLFTLS 186 (360)
Q Consensus 120 ~~~~---~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~--~~-~--~~~~~~i~~~S~s 186 (360)
.++. .+++++|++..++||||.+++ +.+.++|+++|+++|+||+|.+.... .. . .....++ .++|
T Consensus 169 ~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~--~~~s 246 (400)
T PTZ00125 169 ALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDI--VLLG 246 (400)
T ss_pred HHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCE--EEEc
Confidence 3322 357899999989999999886 35678899999999999999742111 11 1 1111233 3578
Q ss_pred cccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhc-
Q 018172 187 KCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQS- 265 (360)
Q Consensus 187 K~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 265 (360)
|.++..++|+||+++ ++++++.+.......+++.+++.|.++.++++.+.+. . ..++.+++.+++.+.|.+.
T Consensus 247 K~l~~g~~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~--~----~~~~~~~~~~~l~~~l~~l~ 319 (400)
T PTZ00125 247 KALSGGLYPISAVLA-NDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEE--K----LAENAQRLGEVFRDGLKELL 319 (400)
T ss_pred ccccCCCcCcEEEEE-cHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc--C----HHHHHHHHHHHHHHHHHHHH
Confidence 999844459999999 8899888865544456778899999888878754322 2 2334444455555555443
Q ss_pred ---CCcccCCCCCcccccccccCCCCCCcccccCCc----h-HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec--CChH
Q 018172 266 ---GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----D-EDCEKLLRAERIMARGGRRFGADAKYARVSML--SREE 335 (360)
Q Consensus 266 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~--~~~e 335 (360)
+.+.... +.+.+.++.++. . ..+.+.|.++||.+.|+. .+++||+.. .+++
T Consensus 320 ~~~~~~~~~~--------------~~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----~~~lRi~~~~~~~~~ 380 (400)
T PTZ00125 320 KKSPWVKEIR--------------GKGLLNAIVFDHSDGVNAWDLCLKLKENGLLAKPTH-----DNIIRFAPPLVITKE 380 (400)
T ss_pred hcCCCeEEEe--------------cccEEEEEEEccCcchHHHHHHHHHHHCCeEEeecC-----CCEEEEECCccCCHH
Confidence 2211111 223355555542 1 456667778899998852 568999953 5999
Q ss_pred HHHHHHHHHHHHHhch
Q 018172 336 IFNIFLERLSAIQGGS 351 (360)
Q Consensus 336 ~~~~~~~~l~~~~~~~ 351 (360)
++++++++|.+++.+.
T Consensus 381 ~i~~~l~~l~~~l~~~ 396 (400)
T PTZ00125 381 QLDQALEIIKKVLKSF 396 (400)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988764
No 232
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.82 E-value=2.1e-18 Score=159.53 Aligned_cols=279 Identities=11% Similarity=0.057 Sum_probs=198.0
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCC-hHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc--HHHHHHhCCeeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTG-STQLYQAALYALSSPGGPEPISVVSAAPYYSQY--PAETDYLRSGLYKW 114 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G-~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~--~~~~~~~g~~~~~~ 114 (360)
+.++|+.++++++. ...++|++++| +|.+++.++..++.+|++ +++...+.... ..+++..|. +..+
T Consensus 39 ~~~~~~~l~~l~~~-----~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~----~l~i~~G~fg~r~~~~a~~~g~-~~~~ 108 (349)
T TIGR01364 39 ANEAESDLRELLNI-----PDNYEVLFLQGGATGQFAAVPLNLLAEGKV----ADYIVTGAWSKKAAKEAKKYGV-VNVV 108 (349)
T ss_pred HHHHHHHHHHHhCC-----CCCceEEEEcCCchHHHHHHHHhcCCCCCe----EEEEECCHHHHHHHHHHHHhCC-cEEE
Confidence 37778888888873 12346888866 999999999999988887 66554443322 567888888 5554
Q ss_pred cCC----------ccccccCCCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEec
Q 018172 115 DGD----------ANTFDKNNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFT 184 (360)
Q Consensus 115 ~~~----------~~~~~~~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S 184 (360)
..+ .+....++++++|.+++-.+.||+..+ ++++.+++++++|.+.+.++.+...+..+ ++++|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~th~ETstGv~~~----~l~~~~~~l~iVDavss~g~~~id~~~~d--~~~~s 182 (349)
T TIGR01364 109 ASGKEGNYTKIPDPSTWEISEDAAYVHYCANETIHGVEFR----ELPDVKNAPLVADMSSNILSRPIDVSKFG--LIYAG 182 (349)
T ss_pred eccccCCCCCCCCHHhcCCCCCCCEEEEcCCCCcccEecc----eecccCCCeEEEEccccccCccCCHHHcc--EEEEe
Confidence 422 222334568899999999999999876 44555899999999998776665555444 99999
Q ss_pred cccccCCCCceEEEEeecCHHHHHHHHHH----------H--hhccccCChHHHHHHHHHhcccCCCchh-HHHHHHHHH
Q 018172 185 LSKCTGHAGSRIGWALVKDTEVARKMTRF----------I--ELGSIGVSKESQLRAAKILGIVSDDYPN-FFEYGRRLM 251 (360)
Q Consensus 185 ~sK~~~~~G~r~G~~~~~~~~~~~~l~~~----------~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~ 251 (360)
.+|.+|++| +|+++. ++++.+.+... . .....++|.....++.++|+.+.+ . .++++.++.
T Consensus 183 sqK~lgP~G--lg~l~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~---~gG~e~i~~r~ 256 (349)
T TIGR01364 183 AQKNIGPAG--LTVVIV-RKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKE---QGGVKAIEKRN 256 (349)
T ss_pred cccccCCCc--eEEEEE-CHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHH---cCCHHHHHHHH
Confidence 999999888 888888 77777655221 1 112346677778888888887653 4 599999999
Q ss_pred HHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEE
Q 018172 252 SERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARV 328 (360)
Q Consensus 252 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~ 328 (360)
++..+++++.|++++++......... ++ +..+.+.+++. ......+.++|+++.+|.. ..+.+|+
T Consensus 257 ~~l~~~l~~~l~~~~gl~~~~~~~~~--------rs-~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~---~~g~vRv 324 (349)
T TIGR01364 257 QAKAQLLYDTIDNSNGFYRNPVDPRN--------RS-RMNVVFTLGNEELEKRFLKEAEERGLVSLKGHR---SVGGMRA 324 (349)
T ss_pred HHHHHHHHHHHHhCCCeeccCCCHHH--------cC-CeEEEEecCChhHhHHHHHHHHHCCCcccCCcc---ccCeeEE
Confidence 99999999999999754332111000 01 01233444432 5555688889998777754 2468999
Q ss_pred EecC--ChHHHHHHHHHHHHHHhc
Q 018172 329 SMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 329 s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
|+.. ++||+++++++|++++.+
T Consensus 325 S~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 325 SIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred ECcCCCCHHHHHHHHHHHHHHHHh
Confidence 9866 899999999999998764
No 233
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.82 E-value=1.3e-18 Score=161.96 Aligned_cols=279 Identities=15% Similarity=0.090 Sum_probs=193.2
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCC-hHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTG-STQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG 116 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G-~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 116 (360)
+.+.|+.++++++.. .+++|++|+| +|++++.++..+..+++. +..|+. .|.......+++..|.+++.++.
T Consensus 46 ~~~~r~~l~~l~~~~-----~~~~vvf~~gs~T~a~~~~~~~l~~~~~~-~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~ 118 (355)
T cd00611 46 VNEAESDLRELLNIP-----DNYKVLFLQGGATGQFAAVPLNLLGDKGT-ADYVVT-GAWSAKAAKEAKRYGGVVVIVAA 118 (355)
T ss_pred HHHHHHHHHHHhCCC-----CCceEEEEcCCchHHHHHHHHhcCCCCCe-EEEEEC-CHHHHHHHHHHHhcCCCcEEEec
Confidence 378999999999841 3457999988 999999999999874332 111333 22222223477888988887775
Q ss_pred Ccc----c------cccCCCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccc
Q 018172 117 DAN----T------FDKNNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLS 186 (360)
Q Consensus 117 ~~~----~------~~~~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~s 186 (360)
+.+ . ...++++++|.+++-+|.||..+++ +++.+|+++++|.+.+.++.+......+ +.+.|.+
T Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~~----i~~~~g~~~~VDa~qs~g~~~idv~~~~--~~~ss~~ 192 (355)
T cd00611 119 KEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFDE----VPDTGGVPLVADMSSNILSRPIDVSKFG--VIYAGAQ 192 (355)
T ss_pred ccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEcce----ecccCCCeEEEEccccccCCCCCHHHhC--EEEeecc
Confidence 421 1 1225789999999999999998553 3445999999999999877666555544 4567789
Q ss_pred cccCCCCceEEEEeecCHHHHHHHHHH-------H----h-hccccCChHHHHHHHHHhcccCCCchh-HHHHHHHHHHH
Q 018172 187 KCTGHAGSRIGWALVKDTEVARKMTRF-------I----E-LGSIGVSKESQLRAAKILGIVSDDYPN-FFEYGRRLMSE 253 (360)
Q Consensus 187 K~~~~~G~r~G~~~~~~~~~~~~l~~~-------~----~-~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~ 253 (360)
|.+|++| +|+++. .+++.+.+... . . ....++|.....++.++++.+.+ . -++++.++.++
T Consensus 193 K~lGP~G--~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~---~gg~e~i~~~~~~ 266 (355)
T cd00611 193 KNLGPAG--VTVVIV-RKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKE---QGGVEAMEKRNRQ 266 (355)
T ss_pred cccCCCc--eEEEEE-CHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHH---cCCHHHHHHHHHH
Confidence 9999887 888888 67777654321 0 0 11235666777888888887653 3 58999999999
Q ss_pred HHHHHHHHHHhcCCcc-cCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEE
Q 018172 254 RWNMLRQVIRQSGVFG-LPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARVS 329 (360)
Q Consensus 254 ~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s 329 (360)
+.+++++.|.+++++. ....... ++ +..+.+.+++. ......+.++|+.+.+|.. ..+.+|+|
T Consensus 267 l~~~l~~~l~~~~gl~~~~~~~~~---------rs-~~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~~~---~~g~vR~S 333 (355)
T cd00611 267 KAQLLYDTIDNSNGFYRGPVDKRA---------RS-RMNVPFRLGKEELEKEFLKEAEAAGMIGLKGHR---SVGGIRAS 333 (355)
T ss_pred HHHHHHHHHHhCccccccCCCHHH---------cC-ceEEEEEcCChhhhHHHHHHHHHCCCcccCCCc---ccCeEEEE
Confidence 9999999999996542 1111000 01 11234444441 4444677788998666653 24689999
Q ss_pred ecC--ChHHHHHHHHHHHHHH
Q 018172 330 MLS--REEIFNIFLERLSAIQ 348 (360)
Q Consensus 330 ~~~--~~e~~~~~~~~l~~~~ 348 (360)
+.. ++||+++++++|+++.
T Consensus 334 ~~~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 334 IYNALSLEGVQALADFMKEFQ 354 (355)
T ss_pred ccCCCCHHHHHHHHHHHHHHh
Confidence 977 9999999999999864
No 234
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.82 E-value=1e-17 Score=156.16 Aligned_cols=249 Identities=16% Similarity=0.146 Sum_probs=172.1
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH----HHHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP----AETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~----~~~~~~g~~~~~ 113 (360)
..+|++.++++.+. + ..+++++++.++++++.+++++||+ |+++.+.|.... ..+...|++++.
T Consensus 66 ~~~lE~~la~leg~-------~-~av~~sSG~aAi~~al~all~~GD~----Vl~~~~~yg~t~~~~~~~~~~~Gi~v~f 133 (384)
T PRK06434 66 VQAFEEKYAVLENA-------E-HALSFSSGMGAITSAILSLIKKGKR----ILSISDLYGQTFYFFNKVLKTLGIHVDY 133 (384)
T ss_pred HHHHHHHHHHHhCC-------C-cEEEeCCHHHHHHHHHHHHhCCCCE----EEEecCccchHHHHHHHHHHhcCcEEEE
Confidence 48999999999984 3 4677777789999999999999998 999988777665 445667999999
Q ss_pred ecCCc-cccccCC-CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccccccC
Q 018172 114 WDGDA-NTFDKNN-GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCTG 190 (360)
Q Consensus 114 ~~~~~-~~~~~~~-~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~~ 190 (360)
++++. +.+..++ ++++|++.+|+|||+.+.+ +.+.++|++++ +++|.++..+ +...+-..+.+++++|.+|.++
T Consensus 134 vd~~~~~~~~l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~-~~~~pl~~gaDivv~S~tK~i~ 210 (384)
T PRK06434 134 IDTDRLNSLDFDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASP-YNQNPLDLGADVVIHSATKYIS 210 (384)
T ss_pred ECCCChhheeecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCc-ccCCchhcCCCEEEeecccccC
Confidence 98875 4666655 7999999999999999888 77888888887 4569998643 2222224678999999999987
Q ss_pred CCC-ceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 018172 191 HAG-SRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFG 269 (360)
Q Consensus 191 ~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 269 (360)
-+| .-.|.+++.++++.+.++..+...+...++.....+ +..+ +.++...++-+++.+.+.+.|..++.+.
T Consensus 211 G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~---~~gL-----~tL~~R~~r~~~~a~~~a~~L~~~p~v~ 282 (384)
T PRK06434 211 GHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLA---LRGL-----KTLGLRMEKHNKNGMELARFLRDSKKIS 282 (384)
T ss_pred CCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHH---HhCC-----CcHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 434 445777776677777777655434444444433332 3322 4455666666788888899999998776
Q ss_pred cCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCe
Q 018172 270 LPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERI 311 (360)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI 311 (360)
.+.++|.. .......+.+..+.+.+++.+.+.+.+.+-.+
T Consensus 283 ~V~yPgl~--~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~l 322 (384)
T PRK06434 283 NVYYPDTE--IGKKVLRGFGGMLSFELRSMEDVHKFIRNLEI 322 (384)
T ss_pred EEECCChH--HHHHhcCCCCceEEEEECCHHHHHHHHHhCCc
Confidence 55555432 11111224455677777654444444444343
No 235
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=1e-17 Score=159.04 Aligned_cols=289 Identities=17% Similarity=0.140 Sum_probs=183.9
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH----HHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE----TDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~----~~~~g~~~~~ 113 (360)
..+|++.++++.+. + ..++++++++++..++.+++++||+ |+++.+.|...... +...|++++.
T Consensus 65 ~~~le~~lA~l~g~-------~-~al~~~SG~~Ai~~al~all~pGd~----VIv~~~~y~~t~~~~~~~~~~~G~~v~~ 132 (427)
T PRK05994 65 NAVLEERVAALEGG-------T-AALAVASGHAAQFLVFHTLLQPGDE----FIAARKLYGGSINQFGHAFKSFGWQVRW 132 (427)
T ss_pred HHHHHHHHHHHhCC-------C-cEEEEcCHHHHHHHHHHHHhCCCCE----EEEecCcchhHHHHHHHHHHhcCcEEEE
Confidence 38899999999984 3 4677777899999999999999998 99999999975443 5667999998
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+ .+.+.. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+.. ..+-..+.++++.|++|.+
T Consensus 133 vd~~d~~~l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~-~~pl~~gaDivv~S~tK~l 211 (427)
T PRK05994 133 ADADDPASFERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYL-IRPIEHGADIVVHSLTKFL 211 (427)
T ss_pred ECCCCHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcccccc-CCccccCCcEEEEcCcccc
Confidence 8754 334433 468999999999999999998 6788888889999999999985432 1223467889999999999
Q ss_pred CCCCceEEEEeecCH------------------H-----HHHHHH----------HHHhhccccCChHHHHHHHHHhccc
Q 018172 190 GHAGSRIGWALVKDT------------------E-----VARKMT----------RFIELGSIGVSKESQLRAAKILGIV 236 (360)
Q Consensus 190 ~~~G~r~G~~~~~~~------------------~-----~~~~l~----------~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (360)
+-+|-.+|.+++... + +.+.+. ......+...++.....+ +..+
T Consensus 212 gg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~---~~~l 288 (427)
T PRK05994 212 GGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLI---LTGI 288 (427)
T ss_pred CCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHH---HcCc
Confidence 866766676555211 1 111110 011112233433333333 3322
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcc----ccccccc-CCCCCCcccccCCch-HHHHHHHHhhC
Q 018172 237 SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEY----CNFTGKF-TNSHPGFAWLESKED-EDCEKLLRAER 310 (360)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~g 310 (360)
+.+....++-+++...+.+.|++++.+..+.+++.. +...... ..+.+..+.+.++++ +.+.+.+..-.
T Consensus 289 -----~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~~~~~~l~ 363 (427)
T PRK05994 289 -----ETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFTFGLKGGYEAGVKLVSSLK 363 (427)
T ss_pred -----ccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceEEEEEEecCCHHHHHHHHHhCC
Confidence 345555566677777888999999877655554421 1111111 123455677777643 44444443333
Q ss_pred eee---eCCCC----------------------CCCCCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 311 IMA---RGGRR----------------------FGADAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 311 I~~---~pg~~----------------------f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
+.. .-|.. .|..++.+|||++.+ +.+.+++.|.+.+.
T Consensus 364 l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE--~~~dli~dl~~Al~ 425 (427)
T PRK05994 364 LFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVVRLSIGIE--DVDDIIADLEQALA 425 (427)
T ss_pred cceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcEEEEeccC--CHHHHHHHHHHHHh
Confidence 322 11211 122246799999762 23445555555554
No 236
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.81 E-value=8.4e-18 Score=162.13 Aligned_cols=306 Identities=14% Similarity=0.105 Sum_probs=191.1
Q ss_pred cccccc---cCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHH--H-hhcCCCCCCCceEEEeC
Q 018172 22 DLMSYL---SDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAAL--Y-ALSSPGGPEPISVVSAA 94 (360)
Q Consensus 22 ~~~~~y---~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~--~-~l~~~gd~~~~~vl~~~ 94 (360)
...+.| +...|. .++++.+++++. ..|. +...+..++|+++.+..+. . .+.++||..+.+|++++
T Consensus 97 ~~~tpYq~e~~sqG~-----lel~~~~~~~la~l~G~---~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~ 168 (481)
T PRK04366 97 AELHPLQPEETVQGA-----LELMYELQEWLKEITGM---DAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPD 168 (481)
T ss_pred hcCCCCCChhhhhHH-----HHHHHHHHHHHHHHhCC---CceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcC
Confidence 344556 345566 777777776543 2233 2335556666666655332 2 34567762233499999
Q ss_pred CCCCCcHHHHHHhCCeeeeecCCccc------cc--cCCCeeEEEEcCCCCCCccc-ch-HHHHHHhhhcCcEEEEeecc
Q 018172 95 PYYSQYPAETDYLRSGLYKWDGDANT------FD--KNNGAYIEVVNSPNNPDGTI-RE-AVLAKVNRSAEGKLIHDLAY 164 (360)
Q Consensus 95 p~~~~~~~~~~~~g~~~~~~~~~~~~------~~--~~~~~~~i~~~~p~NPtG~~-~~-~~~~~~~~~~~~~li~D~ay 164 (360)
|+|+.+...++..|++++.++.+.++ +. .++++++|++++|| |||.. .+ +.+.++|+++|+++++|.++
T Consensus 169 ~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~ 247 (481)
T PRK04366 169 SAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGAN 247 (481)
T ss_pred CccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcccCCeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecC
Confidence 99999999999999999998875432 22 14688999999998 99976 23 56677888899999999998
Q ss_pred cCCCCC-cCCCCCCccEEEeccccccCCC----CceEEEEeecCHHHHHHHHHH------H-------------hhcccc
Q 018172 165 YWPQYT-PITGAADHDIMLFTLSKCTGHA----GSRIGWALVKDTEVARKMTRF------I-------------ELGSIG 220 (360)
Q Consensus 165 ~~~~~~-~~~~~~~~~i~~~S~sK~~~~~----G~r~G~~~~~~~~~~~~l~~~------~-------------~~~~~~ 220 (360)
...... ..++..+.+++++|.+|.|+.| |-.+|++.+ .+++.+.+... . .....+
T Consensus 248 ~~~~~g~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~-~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t 326 (481)
T PRK04366 248 LNAILGKARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGV-KEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFY 326 (481)
T ss_pred hhhhcccCCccccCCCEEEEechhhcCCCCCCCCCCeeeeee-hhhhHhhCCCCeeeccCCceeecccccccCCCccccc
Confidence 632111 1245678899999999988644 234778877 56666655200 0 000111
Q ss_pred CChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCccc--ccCC-
Q 018172 221 VSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAW--LESK- 297 (360)
Q Consensus 221 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~- 297 (360)
.+.....++...+..+ + .+-+.+..++..++.+++.+.|+++ +.+......+..+. |-+ +..+
T Consensus 327 ~~~l~~~~a~~~l~~~-G--~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~---------~~~~~~~~~g 392 (481)
T PRK04366 327 GNFGVLVRAYAYIRSL-G--AEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFV---------LSGKKLKETG 392 (481)
T ss_pred CchHHHHHHHHHHHHH-H--HHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEE---------EECccccccC
Confidence 2223333444444322 1 1556666777788888999999886 22221111100000 101 1222
Q ss_pred -chHHHHHHHHhhCeeeeCCCCCC-CCCCeEEEEecC--ChHHHHHHHHHHHHHHhchh
Q 018172 298 -EDEDCEKLLRAERIMARGGRRFG-ADAKYARVSMLS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 298 -~~~~~~~~l~~~gI~~~pg~~f~-~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
+..++.+.|.++||.+.. ..+. ...+.+|+|++- +++++++++++|.++.++..
T Consensus 393 ~~~~~v~~~L~~~Gi~~~~-~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~ 450 (481)
T PRK04366 393 VRTLDIAKRLLDYGFHPPT-IYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEEAK 450 (481)
T ss_pred CCHHHHHHHHHHCCccCCc-cccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 237889999999998652 2221 235689999854 89999999999999987643
No 237
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.81 E-value=2.2e-18 Score=148.28 Aligned_cols=320 Identities=14% Similarity=0.113 Sum_probs=222.7
Q ss_pred HHHHHHhcCCceeeecCCccccc-ccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEE--EcCChHHHHHHHHHhh-
Q 018172 4 EAFWRKLGDKCTMVISGSDLMSY-LSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIV--IGTGSTQLYQAALYAL- 79 (360)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~-y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~--~t~G~t~~l~~~~~~l- 79 (360)
.+|.....++.+..++....+++ |-+..|. +.++++.++.+=..+.+..++++++ -+-|+|.+++.....|
T Consensus 46 ~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl-----~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~ 120 (410)
T KOG1412|consen 46 KPWVLPVVKKAEKKIANDQSLNHEYLPILGL-----PTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLA 120 (410)
T ss_pred CeeEehhhhhhhhhccCchhccchhccccCc-----hhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHH
Confidence 35677777777888888777766 8899998 9999999997433344444455543 3456688888776655
Q ss_pred --cCCCCCCCceEEEeCCCCCCcHHHHHHhCCeee----eec-----CCcccccc----C-CCeeEEEEcCCCCCCcccc
Q 018172 80 --SSPGGPEPISVVSAAPYYSQYPAETDYLRSGLY----KWD-----GDANTFDK----N-NGAYIEVVNSPNNPDGTIR 143 (360)
Q Consensus 80 --~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~----~~~-----~~~~~~~~----~-~~~~~i~~~~p~NPtG~~~ 143 (360)
++ ..+ |.+++|+|.+...+++..|...+ .|. +|.+++.. . +....++..+.|||||.-.
T Consensus 121 ~~~~-~~~----VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDP 195 (410)
T KOG1412|consen 121 TFYN-KNT----VYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDP 195 (410)
T ss_pred Hhcc-cce----eEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCC
Confidence 33 334 99999999999999999995333 333 33444433 2 3334445567899999988
Q ss_pred hH----HHHHHhhhcCcEEEEeecccCCC-CCcCC---------CCCCccEEEeccccccCCCCceEEEEe--ecCHH--
Q 018172 144 EA----VLAKVNRSAEGKLIHDLAYYWPQ-YTPIT---------GAADHDIMLFTLSKCTGHAGSRIGWAL--VKDTE-- 205 (360)
Q Consensus 144 ~~----~~~~~~~~~~~~li~D~ay~~~~-~~~~~---------~~~~~~i~~~S~sK~~~~~G~r~G~~~--~~~~~-- 205 (360)
++ .+.+.-++++.+.+.|.+|.+.. -.+.. ....-.++..||+|.||+.+.|+|-+. ..++.
T Consensus 196 T~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i 275 (410)
T KOG1412|consen 196 TREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVI 275 (410)
T ss_pred CHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHH
Confidence 73 34444445899999999998532 11211 233447889999999999999999643 33444
Q ss_pred --HHHHHHHHHhhccccCChHHHHHHHHHhcccC--CCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccc
Q 018172 206 --VARKMTRFIELGSIGVSKESQLRAAKILGIVS--DDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFT 281 (360)
Q Consensus 206 --~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 281 (360)
+..+|.......-++++..+...+...|+... +++..-+..+..++++.|..|++.|..++ -+|.+
T Consensus 276 ~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~------TPGtW---- 345 (410)
T KOG1412|consen 276 AGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALK------TPGTW---- 345 (410)
T ss_pred HHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CCCcH----
Confidence 44455556666666788888888888888432 22345566677888888888888888884 22333
Q ss_pred cccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHHhchhc
Q 018172 282 GKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~~~ 353 (360)
|.+.+..|+|-+..+.. ..+..+.++++|++.+ +| |++++. ....+|...++|.+.++..+.
T Consensus 346 DHI~~QiGMFSyTGLtp-~qV~~li~~h~vyLl~-------~G--RInisGLN~~NveyVAkAIde~Vr~~~~ 408 (410)
T KOG1412|consen 346 DHITQQIGMFSYTGLTP-AQVDHLIENHKVYLLS-------DG--RINISGLNMKNVEYVAKAIDETVRAIKS 408 (410)
T ss_pred HHHHhhccceeecCCCH-HHHHHHHHhceEEEec-------CC--cEeeeccccccHHHHHHHHHHHHHhhcc
Confidence 55556666665555543 7788888889999876 33 888877 888999999999999876543
No 238
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=1.4e-17 Score=155.24 Aligned_cols=252 Identities=14% Similarity=0.059 Sum_probs=177.4
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH----HHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET----DYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~----~~~g~~~~~ 113 (360)
...|++.++++.+. + ..++++++++++..++..++++||+ |+++...|.+....+ +..|.++..
T Consensus 64 ~~~le~~la~LEg~-------~-~a~~~~SGmaAi~~~~~~ll~~GD~----Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~ 131 (395)
T PRK08114 64 HFSLQEAMCELEGG-------A-GCALYPCGAAAVANAILAFVEQGDH----VLMTGTAYEPTQDFCSKILSKLGVTTTW 131 (395)
T ss_pred HHHHHHHHHHHhCC-------C-eEEEEhHHHHHHHHHHHHHcCCCCE----EEEeCCCcHHHHHHHHHHHHhcCcEEEE
Confidence 37889999998773 3 5777777899999999999999998 999999998887665 557999988
Q ss_pred ecC-Ccccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhc--CcEEEEeecccCCCCCcCCCCCCccEEEecccc
Q 018172 114 WDG-DANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSA--EGKLIHDLAYYWPQYTPITGAADHDIMLFTLSK 187 (360)
Q Consensus 114 ~~~-~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~--~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK 187 (360)
++. |.+.+.. +++|++|++.+|+||||.+.+ +.+.++|+++ |+++++|.++..+.. .-+...+.+++++|.+|
T Consensus 132 vd~~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~pl~~GaDivv~S~tK 210 (395)
T PRK08114 132 FDPLIGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-FKALDFGIDISIQAGTK 210 (395)
T ss_pred ECCCCHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-cCHHHcCCcEEEEcCcc
Confidence 864 3344443 568999999999999999999 7788888876 599999999986543 44456789999999999
Q ss_pred ccCCC-CceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 018172 188 CTGHA-GSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSG 266 (360)
Q Consensus 188 ~~~~~-G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 266 (360)
.++-+ ..-.|.++. +++..+.+.......+...++.....+...++ -+.-..++..++...+.+.|++++
T Consensus 211 yl~Ghsdv~~G~v~~-~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~--------TL~lR~~~~~~na~~va~~L~~hp 281 (395)
T PRK08114 211 YLVGHSDAMIGTAVA-NARCWEQLRENSYLMGQMVDADTAYMTSRGLR--------TLGVRLRQHEESSLKVAEWLAEHP 281 (395)
T ss_pred cccCCCcceeEEEEc-CHHHHHHHHHHHHhccCCCCHHHHHHHHcCCC--------cHHHHHHHHHHHHHHHHHHHHcCC
Confidence 66534 366776665 67777777665555566666666665544443 244445556777788999999998
Q ss_pred CcccCCCCCcc----cccccccCCCCCCcccccCCc---hHHHHHHHHhhCe
Q 018172 267 VFGLPEYPLEY----CNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERI 311 (360)
Q Consensus 267 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI 311 (360)
.+..+.+++-. +........+.+..+.+.+++ .+.+.+.+.+-.+
T Consensus 282 ~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~l~l 333 (395)
T PRK08114 282 EVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDNFSL 333 (395)
T ss_pred CEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHhCCc
Confidence 76655444311 111111122445567777764 2444444443333
No 239
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=1.9e-17 Score=156.90 Aligned_cols=290 Identities=13% Similarity=0.071 Sum_probs=184.3
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH----HHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE----TDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~----~~~~g~~~~~ 113 (360)
...|++.++++.+. + ..+++++++.++..++..++++||+ |+++...|...... +...|++++.
T Consensus 71 ~~~Le~~lA~l~g~-------~-~av~~sSG~aAi~~al~all~~Gd~----Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~ 138 (436)
T PRK07812 71 QDVVEQRIAALEGG-------V-AALLLASGQAAETFAILNLAGAGDH----IVSSPRLYGGTYNLFHYTLPKLGIEVSF 138 (436)
T ss_pred HHHHHHHHHHHhCC-------C-eEEEEccHHHHHHHHHHHHhCCCCE----EEEeCCcchHHHHHHHHHhhcCeEEEEE
Confidence 47999999999984 3 3566667788999999999999998 99999888877654 3446888888
Q ss_pred ec--CCcccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccccc
Q 018172 114 WD--GDANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKC 188 (360)
Q Consensus 114 ~~--~~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~ 188 (360)
++ .|.+.+.. ++++++|++.+|+||+|.+.+ +.+.++|+++|+++|+|+++..+... .+-..+.++++.|++|.
T Consensus 139 vdd~~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~-~pl~~GaDivv~S~tK~ 217 (436)
T PRK07812 139 VEDPDDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLI-RPLEHGADIVVHSATKY 217 (436)
T ss_pred ECCCCCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-CchhcCCCEEEEecccc
Confidence 75 22233332 578999999999999999999 78888999899999999998754322 22346788999999999
Q ss_pred cCCCCceEEEEeecCHH------------------------------HHHHHH-HHHhhccccCChHHHHHHHHHhcccC
Q 018172 189 TGHAGSRIGWALVKDTE------------------------------VARKMT-RFIELGSIGVSKESQLRAAKILGIVS 237 (360)
Q Consensus 189 ~~~~G~r~G~~~~~~~~------------------------------~~~~l~-~~~~~~~~~~~~~~~~~~~~~l~~~~ 237 (360)
++..|--+|+++..... ++..++ ......+...++.....+ +..+
T Consensus 218 lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~---~rgl- 293 (436)
T PRK07812 218 LGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLI---AQGL- 293 (436)
T ss_pred cCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHH---hcCc-
Confidence 98777767777763211 010111 112223444555444433 3322
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcc----cccccccC-CCCCCcccccCCch-HHHHHHHHhhCe
Q 018172 238 DDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEY----CNFTGKFT-NSHPGFAWLESKED-EDCEKLLRAERI 311 (360)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~~~gI 311 (360)
+-+....++-.++...+.+.|++++.+..+.++|.. +....... .+.+..+.+.++++ +.+.+.+.+-.+
T Consensus 294 ----~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l 369 (436)
T PRK07812 294 ----ETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNALTL 369 (436)
T ss_pred ----CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCc
Confidence 334444555577778899999999876654444321 11111111 23456778887544 334444433333
Q ss_pred eee---CCCC----------------------CCCCCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 312 MAR---GGRR----------------------FGADAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 312 ~~~---pg~~----------------------f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
... -|.. .|..++.+|||++.+ +.+.+++.|.+.++.
T Consensus 370 ~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGlE--d~~dli~dl~~Al~~ 431 (436)
T PRK07812 370 HSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGIE--GIDDILADLEAGFAA 431 (436)
T ss_pred ceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHh
Confidence 221 1211 122356799999662 234455555555543
No 240
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.80 E-value=1.9e-17 Score=155.46 Aligned_cols=288 Identities=13% Similarity=-0.018 Sum_probs=190.1
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcC-ChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH--HHHHhCC-eeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGT-GSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA--ETDYLRS-GLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~-G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~--~~~~~g~-~~~~ 113 (360)
..+.|+.++++++. .++++|++++ |+|.+++.++..|+++++. .++..-.|+.-.. +.+.+|. +++.
T Consensus 50 ~~~~r~~l~~l~~~-----~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~----~vi~~g~f~~~~~~~~~~~~g~~~v~~ 120 (378)
T PRK03080 50 LKRVIEGTRELLSL-----PEGYEVGIVPGSDTGAWEMALWSLLGARRV----DHLAWESFGSKWATDVVKQLKLEDPRV 120 (378)
T ss_pred HHHHHHHHHHHhCC-----CCCceEEEECCchHHHHHHHHHhcCCCCcc----eEEEeCHHHHHHHHHHHhhcCCCCceE
Confidence 48888889999885 1234788875 8999999999999874332 3333445554322 2356788 8887
Q ss_pred ecCCcccc-cc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGDANTF-DK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~~~~~-~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+.... +. -..++.|.+++.+|.||...+ +++.+ +++|+++++|.+++.++.+..... .++++.|.+|.+
T Consensus 121 ~~~~~g~~~d~~~i~~~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~~--iD~~~~s~~K~l 196 (378)
T PRK03080 121 LEADYGSLPDLSAVDFDRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWSK--LDVYTFSWQKVL 196 (378)
T ss_pred eccCCCCCCCHhhcCCCCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHHH--CcEEEEehhhhC
Confidence 76553211 11 112567999999999999998 45544 458999999999987665554443 589999999988
Q ss_pred C-CCCceEEEEeecCHHHHHHHHHHH----------------------hhcc-ccCChHHHHHHHHHhcccCCCchhHHH
Q 018172 190 G-HAGSRIGWALVKDTEVARKMTRFI----------------------ELGS-IGVSKESQLRAAKILGIVSDDYPNFFE 245 (360)
Q Consensus 190 ~-~~G~r~G~~~~~~~~~~~~l~~~~----------------------~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~ 245 (360)
+ ++| +|+++. +++..+.+.... ...+ .+++.....++.++++.+.+. .-++
T Consensus 197 ~~P~G--~g~l~v-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~--gG~e 271 (378)
T PRK03080 197 GGEGG--HGMAIL-SPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSI--GGLD 271 (378)
T ss_pred CCCCc--eEEEEE-CHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHc--CCHH
Confidence 5 366 888888 677777665321 0011 122333444445667655431 1578
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---h--HHHHHHHHhhCeeeeCCCCCC
Q 018172 246 YGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---D--EDCEKLLRAERIMARGGRRFG 320 (360)
Q Consensus 246 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~l~~~gI~~~pg~~f~ 320 (360)
+++++.+++.+++++.|++++++.+..+.... .+ +..+.+.+++ . ......|.++||.++.|.. +
T Consensus 272 ~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~--------~s-~~i~~~~~~~~~~~~~~~~~~~l~~~~i~v~~g~~-~ 341 (378)
T PRK03080 272 ALIARTAANASVLYDWAEKTPWATPLVADPAT--------RS-NTSVTLDFVDAQAAVDAAAVAKLLRENGAVDIEPY-R 341 (378)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcccccCCccc--------cC-ccEEEEEcCCchHHHHHHHHHHHHHcCCeeccccc-c
Confidence 88999999999999999998765543221110 01 1134445555 2 3344455566888887642 2
Q ss_pred CCCCeEEEEecC--ChHHHHHHHHHHHHHHhchhc
Q 018172 321 ADAKYARVSMLS--REEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 321 ~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~~ 353 (360)
...+.+|+|+.. +++++++++++|++++++.+.
T Consensus 342 ~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 342 DAPNGLRIWCGPTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred CCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 235789999865 899999999999998876543
No 241
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.80 E-value=6.9e-17 Score=147.59 Aligned_cols=282 Identities=17% Similarity=0.151 Sum_probs=195.5
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG 116 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 116 (360)
..++++++++|+|. . ..+.++++|.++++++.+| .++||. ||+|.-+|....+.+...|++++.+++
T Consensus 36 v~~FE~~~ae~~G~-------k-~ava~~sgT~AL~laL~al~ig~GDe----VI~ps~TfvATan~i~~~Ga~PVFvDi 103 (374)
T COG0399 36 VRRFEQAFAEYLGV-------K-YAVAVSSGTAALHLALLALAIGPGDE----VIVPSFTFVATANAVLLVGAKPVFVDI 103 (374)
T ss_pred HHHHHHHHHHHhCC-------C-eEEEecChHHHHHHHHHhcCCCCCCE----EEecCCchHHHHHHHHHcCCeEEEEec
Confidence 48999999999995 3 6778888899999999966 689998 999999999999999999999999999
Q ss_pred Ccccccc---------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC-CCcCCCCCCccEEEecc
Q 018172 117 DANTFDK---------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ-YTPITGAADHDIMLFTL 185 (360)
Q Consensus 117 ~~~~~~~---------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~-~~~~~~~~~~~i~~~S~ 185 (360)
|++.+.. .++||+|+ |-+--|...+ +.+.++|++||++||+|.+++.+. +..-....-.++.++||
T Consensus 104 d~~T~nid~~~ie~aIt~~tKAIi---pVhl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF 180 (374)
T COG0399 104 DPDTLNIDPDLIEAAITPRTKAII---PVHLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSF 180 (374)
T ss_pred CCcccCCCHHHHHHHcccCCeEEE---EehhccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCcccccccceEEEEe
Confidence 8776655 36799999 4446777777 778888999999999999998542 22222112234566666
Q ss_pred --ccccCCCCceEEEEeecCHHHHHHHHHHHhhccc------------c-CChHHHHHHHHHhcccCCCchhHHHHHHHH
Q 018172 186 --SKCTGHAGSRIGWALVKDTEVARKMTRFIELGSI------------G-VSKESQLRAAKILGIVSDDYPNFFEYGRRL 250 (360)
Q Consensus 186 --sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~------------~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (360)
+|.++ +| ..|.+++.++++.+.++.++..+.. + ...++-..|+..+..+ +.+++...+
T Consensus 181 ~~~K~it-tg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL-----~~l~~~~~~ 253 (374)
T COG0399 181 HATKNLT-TG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQL-----ERLDEINER 253 (374)
T ss_pred cCCCCcc-cc-CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHH-----HHHHHHHHH
Confidence 68888 66 6799999899999999877754332 1 1123333333334332 455555555
Q ss_pred HHHHHHHHHHHHHhcCCcccCCCCCcc-cccccccCCCCCCcccccCCc---h-HHHHHHHHhhCee----eeCCCCC--
Q 018172 251 MSERWNMLRQVIRQSGVFGLPEYPLEY-CNFTGKFTNSHPGFAWLESKE---D-EDCEKLLRAERIM----ARGGRRF-- 319 (360)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~l~~~gI~----~~pg~~f-- 319 (360)
-++..+++.+.|++++++..+...... .+|. +..+.++. . +.+...|+++||. .+|-...
T Consensus 254 R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~---------~~~i~~~~~~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~ 324 (374)
T COG0399 254 RREIAQIYAEALKGLPGITLPPEPDGAVHAWH---------LYTILVDEEGISRDALMESLKEAGVGAVVYFRPLHLQPA 324 (374)
T ss_pred HHHHHHHHHHHhhcCCCccccCCCCCceeeee---------eeEEEecCCCCCHHHHHHHHHhCCCCceEEeeccccchh
Confidence 566666777888887655554433221 1111 12233332 1 7889999999554 4553211
Q ss_pred ----C-----C-------CCCeEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 320 ----G-----A-------DAKYARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 320 ----~-----~-------~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
+ . ....+++.+.. +++++++.++++++++.+
T Consensus 325 ~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 325 YRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred hhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 0 0 12357776644 899999999999998864
No 242
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.80 E-value=2.2e-17 Score=153.55 Aligned_cols=287 Identities=17% Similarity=0.171 Sum_probs=190.4
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHH----hCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDY----LRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~----~g~~~~~ 113 (360)
...|+++++++.+. +.+++++++..|+..++.+++++||+ |+.+...|......++. .|.++..
T Consensus 57 ~~~le~~la~Le~g--------~~a~~~~SGmaAi~~~l~~ll~~Gd~----iv~~~~~Y~~t~~~~~~~l~~~gv~v~~ 124 (386)
T PF01053_consen 57 VRALEQRLAALEGG--------EDALLFSSGMAAISAALLALLKPGDH----IVASDDLYGGTYRLLEELLPRFGVEVTF 124 (386)
T ss_dssp HHHHHHHHHHHHT---------SEEEEESSHHHHHHHHHHHHS-TTBE----EEEESSSSHHHHHHHHHCHHHTTSEEEE
T ss_pred HHHHHHHHHHhhcc--------cceeeccchHHHHHHHHHhhcccCCc----eEecCCccCcchhhhhhhhcccCcEEEE
Confidence 37889999988874 46888889999999999999999998 99999999998877665 5999888
Q ss_pred ecC-Ccccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcC-cEEEEeecccCCCCCcCCCCCCccEEEeccccc
Q 018172 114 WDG-DANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAE-GKLIHDLAYYWPQYTPITGAADHDIMLFTLSKC 188 (360)
Q Consensus 114 ~~~-~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~-~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~ 188 (360)
++. |.+.+.. ++++++|++.+|+||+..+.+ +.+.++++++| +++++|+.+..+- ..-+-..+.++++.|.+|.
T Consensus 125 ~d~~d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~-~~~pL~~GaDivv~S~TKy 203 (386)
T PF01053_consen 125 VDPTDLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPY-NQNPLELGADIVVHSATKY 203 (386)
T ss_dssp ESTTSHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTT-TC-GGGGT-SEEEEETTTT
T ss_pred eCchhHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeecccccee-eeccCcCCceEEEeecccc
Confidence 865 3455544 568999999999999999998 78888899898 9999999987541 1112345689999999998
Q ss_pred cC-CCCceEEEEeecC-HHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 018172 189 TG-HAGSRIGWALVKD-TEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSG 266 (360)
Q Consensus 189 ~~-~~G~r~G~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 266 (360)
++ ....=.|.+++++ .++.+.++......+...++.....+...++ . +.-..++..++.+.+.+.|.+++
T Consensus 204 l~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~-------T-l~~R~~~~~~nA~~lA~~L~~hp 275 (386)
T PF01053_consen 204 LSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLR-------T-LPLRMERQNENAEALAEFLEEHP 275 (386)
T ss_dssp TTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHT-------T-HHHHHHHHHHHHHHHHHHHHTST
T ss_pred ccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCC-------c-HHHHHHHHHHHHHHHHHHHHhCC
Confidence 85 3333367777655 6888888877766666777777766666554 2 33344455667788999999998
Q ss_pred CcccCCCCCcc----cccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCC----------------------
Q 018172 267 VFGLPEYPLEY----CNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRF---------------------- 319 (360)
Q Consensus 267 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f---------------------- 319 (360)
.+..+.+++.. +........+.+..+.+.+++. +.+.+.+.+-.+. ..|..+
T Consensus 276 ~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l~-~~~~SlGg~~SLi~~p~~~~h~~~~~e~ 354 (386)
T PF01053_consen 276 KVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKLF-SIAPSLGGVESLISHPASTSHRSLSPEE 354 (386)
T ss_dssp TEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SSS-EESSS-SSSS-EEEETTCTTTTTSCHHH
T ss_pred CCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhhH-hhhhhcCCcccccccccchhhccCChhh
Confidence 66644333211 1111222334445788888887 4666666555553 112112
Q ss_pred ----CCCCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 320 ----GADAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 320 ----~~~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
|..++.+|||++. |+.+.+++.|++.+
T Consensus 355 ~~~~Gi~~~liRlSvGl--Ed~~dLi~Dl~~AL 385 (386)
T PF01053_consen 355 RAEAGISDGLIRLSVGL--EDPDDLIADLEQAL 385 (386)
T ss_dssp HHHTTS-TTEEEEE--S--S-HHHHHHHHHHHH
T ss_pred hhccCCCCCeeEEEecc--CCHHHHHHHHHHhc
Confidence 2235689999866 33455566665554
No 243
>PLN00144 acetylornithine transaminase
Probab=99.80 E-value=2e-17 Score=155.26 Aligned_cols=268 Identities=14% Similarity=0.033 Sum_probs=173.3
Q ss_pred CCcEEEcCChHHHHHHHHHhhcCC----CCCC-------CceEEEeCCCCCCcHHHHHHhCCe-------------eeee
Q 018172 59 GRHIVIGTGSTQLYQAALYALSSP----GGPE-------PISVVSAAPYYSQYPAETDYLRSG-------------LYKW 114 (360)
Q Consensus 59 ~~~i~~t~G~t~~l~~~~~~l~~~----gd~~-------~~~vl~~~p~~~~~~~~~~~~g~~-------------~~~~ 114 (360)
.+.|++++++++++..+++....- +... +.+|+.-..+|......+...... +..+
T Consensus 72 ~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~ 151 (382)
T PLN00144 72 ADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFV 151 (382)
T ss_pred CCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEe
Confidence 358999999999999988866310 1000 124888887787765444332211 1112
Q ss_pred cC-Ccccccc---CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCc--CC---CCCCccE
Q 018172 115 DG-DANTFDK---NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTP--IT---GAADHDI 180 (360)
Q Consensus 115 ~~-~~~~~~~---~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~--~~---~~~~~~i 180 (360)
+. |.+.++. ..++.+|++.--+||.|...+ +.+.++|+++|+++|+||+|.+..... .. .....+
T Consensus 152 ~~~d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD- 230 (382)
T PLN00144 152 EYGNLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD- 230 (382)
T ss_pred CCCCHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC-
Confidence 11 2222221 245667766545788555432 367789999999999999998532111 11 111122
Q ss_pred EEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHH
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQ 260 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 260 (360)
+.||||.++ +|+|+||+++ ++++++.+.......+++.|++++.++.+.++.+.+. ...+..++.-++.++.+.+
T Consensus 231 -i~t~sK~l~-~G~pig~v~~-~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~--~~~~~~~~~g~~l~~~l~~ 305 (382)
T PLN00144 231 -IMTLAKPLA-GGLPIGAVLV-TEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKP--GFLASVAKKGEYLRELLRR 305 (382)
T ss_pred -EEEeccccc-CCcceEEEEE-cHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHHHHHHHH
Confidence 889999999 8999999999 8999988865555567889999999999877766443 3333333333333444555
Q ss_pred HHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC--ChHHH
Q 018172 261 VIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRFGADAKYARVSMLS--REEIF 337 (360)
Q Consensus 261 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~--~~e~~ 337 (360)
.+.+++.+.- +.+.+.++|+.+... ..+...+.++||.+.|+. . .+.+|++++. +++++
T Consensus 306 ~~~~~~~~~~--------------vrg~G~~~~l~l~~~~~~~~~~~~~~Gv~i~~~~---~-~~~lrl~p~~~~~~~~i 367 (382)
T PLN00144 306 KLGGNPHVKE--------------VRGVGLLVGIQLDVPAGPLVDACRDSGLLVLTAG---K-GDVVRLVPPLVISEAEL 367 (382)
T ss_pred HHhhCCCcee--------------eecCceEEEEEecCccHHHHHHHHHCCeEEeecC---C-CCEEEEeCCCccCHHHH
Confidence 5555532211 113445778877433 667788889999999862 1 4689998855 89999
Q ss_pred HHHHHHHHHHHhc
Q 018172 338 NIFLERLSAIQGG 350 (360)
Q Consensus 338 ~~~~~~l~~~~~~ 350 (360)
++++++|.+++.+
T Consensus 368 ~~~~~~l~~~l~~ 380 (382)
T PLN00144 368 EQAVEILADCLPA 380 (382)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999864
No 244
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.79 E-value=3.2e-17 Score=155.93 Aligned_cols=266 Identities=16% Similarity=0.059 Sum_probs=170.9
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHHHh-CC-------------eeeeecCC-------
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETDYL-RS-------------GLYKWDGD------- 117 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~------- 117 (360)
+.+++++++++++..+++.... .|.. +|+.-..+|......+... +- .+..++..
T Consensus 95 ~~v~f~~sGseA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (420)
T TIGR00700 95 KKSVFFNSGAEAVENAVKIARSYTGRP---GVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGL 171 (420)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhcCCC---cEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccc
Confidence 4799999999999998887642 2322 3777777777765433332 11 01112110
Q ss_pred ----------ccccc------c-CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCc-CC-
Q 018172 118 ----------ANTFD------K-NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTP-IT- 173 (360)
Q Consensus 118 ----------~~~~~------~-~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~-~~- 173 (360)
.+.++ . .++..+|++.-...-+|.+++ +.+.++|+++|+++|+||+|.+..... ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a 251 (420)
T TIGR00700 172 LDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFA 251 (420)
T ss_pred cccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHH
Confidence 00110 1 234556666555566888765 467789999999999999998532211 11
Q ss_pred -CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHH
Q 018172 174 -GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMS 252 (360)
Q Consensus 174 -~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 252 (360)
...+....+.++||.++ +|+|+||+++ ++++++.+.......+++.|+++|.++.+.++.+.+. ...+..++.-.
T Consensus 252 ~~~~~~~pDi~~lsK~l~-~G~pig~v~~-~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~--~~~~~~~~~g~ 327 (420)
T TIGR00700 252 CEHEGPEPDLITTAKSLA-DGLPLSGVTG-RAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESE--GLIERARQIGR 327 (420)
T ss_pred HhhcCCCCCEEEeecccc-CCcceEEEEe-cHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhc--cHHHHHHHHHH
Confidence 22233344667999999 9999999999 8999988865555578889999999998888765432 33344433333
Q ss_pred HHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccC-------Cch---HHHHHHHHhhCeeeeCCCCCCCC
Q 018172 253 ERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLES-------KED---EDCEKLLRAERIMARGGRRFGAD 322 (360)
Q Consensus 253 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---~~~~~~l~~~gI~~~pg~~f~~~ 322 (360)
+.++.+.+....++.+....+.| .++|+.+ ++. ..+...+.++||.+.|+..|+
T Consensus 328 ~l~~~L~~l~~~~~~~~~vrg~G--------------~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~-- 391 (420)
T TIGR00700 328 LVTDRLTTLKAVDPRIGDVRGLG--------------AMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMFG-- 391 (420)
T ss_pred HHHHHHHHHHhhCCCEEEeeccc--------------eEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCCC--
Confidence 34444444444444333233333 3445543 121 445566678999999987775
Q ss_pred CCeEEEEec--CChHHHHHHHHHHHHHHh
Q 018172 323 AKYARVSML--SREEIFNIFLERLSAIQG 349 (360)
Q Consensus 323 ~~~~R~s~~--~~~e~~~~~~~~l~~~~~ 349 (360)
+++||+++ .+++++++++++|.+++.
T Consensus 392 -~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 392 -NIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred -CEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 59999975 389999999999999874
No 245
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.79 E-value=2.5e-17 Score=155.67 Aligned_cols=264 Identities=13% Similarity=0.070 Sum_probs=169.9
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-------CCCCCCceEEEeCCCCCCcHHH-HHHhCCe------------eeeecC-Cc
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-------PGGPEPISVVSAAPYYSQYPAE-TDYLRSG------------LYKWDG-DA 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-------~gd~~~~~vl~~~p~~~~~~~~-~~~~g~~------------~~~~~~-~~ 118 (360)
+.+++++++++++..+++.+.. +|.. +|+..+-+|...... +...+.. +..++. |.
T Consensus 93 ~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~---~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 169 (397)
T TIGR03246 93 DKVFFCNSGAEANEAALKLARRYALDKHGADKS---EIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDL 169 (397)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCC---EEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCH
Confidence 4799999999999999997721 2222 377777666665433 3332221 112221 22
Q ss_pred ccccc--CCCeeEEEEcCCCCCCcccc-h----HHHHHHhhhcCcEEEEeecccCCCCC-cCC--CCCCccEEEeccccc
Q 018172 119 NTFDK--NNGAYIEVVNSPNNPDGTIR-E----AVLAKVNRSAEGKLIHDLAYYWPQYT-PIT--GAADHDIMLFTLSKC 188 (360)
Q Consensus 119 ~~~~~--~~~~~~i~~~~p~NPtG~~~-~----~~~~~~~~~~~~~li~D~ay~~~~~~-~~~--~~~~~~i~~~S~sK~ 188 (360)
+.++. ++++++|++..++++.|... + +.+.++|+++|+++|+||+|.+.... ... ...+...-+.+++|.
T Consensus 170 ~~l~~~l~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t~~K~ 249 (397)
T TIGR03246 170 AAAKALISDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSAKA 249 (397)
T ss_pred HHHHHHhccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEEeehh
Confidence 22222 34678888886666667664 3 46778999999999999999632111 110 111222224489999
Q ss_pred cCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC-
Q 018172 189 TGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGV- 267 (360)
Q Consensus 189 ~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~- 267 (360)
++ .|+++||+++ ++++++.+.......+++.+++.+.++.+.++.+.+ ++..+.++++.+++.+.|+++..
T Consensus 250 lg-gG~pigav~~-~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~------~~l~~~~~~~~~~l~~~L~~l~~~ 321 (397)
T TIGR03246 250 LG-GGFPIGAMLT-TTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNT------PELLAGVKQRHDLFVDGLEKINAR 321 (397)
T ss_pred hh-CCcceeEEEE-cHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhh------ccHHHHHHHHHHHHHHHHHHHHhc
Confidence 98 8999999999 888888886544445677889999998888875432 34667777888888888877631
Q ss_pred cccCCCCCcccccccccCCCCCCcccccCCc-----hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEE--ecCChHHHHHH
Q 018172 268 FGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-----DEDCEKLLRAERIMARGGRRFGADAKYARVS--MLSREEIFNIF 340 (360)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s--~~~~~e~~~~~ 340 (360)
..+.. .+++.+.++.+.+.+ ...+.+.|.++||.+.+. + .+++|++ +..++++++++
T Consensus 322 ~~~~~-----------~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g--~~~lR~~p~~~~t~~~i~~~ 385 (397)
T TIGR03246 322 YNVFS-----------EIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIA---G--PNVVRFAPSLVISDDDIDEG 385 (397)
T ss_pred CCCeE-----------eeecCceEEEEEEcCchhhHHHHHHHHHHHCCeEEeec---C--CCEEEEeCCCCCCHHHHHHH
Confidence 00000 011222233333321 256667788899998762 2 4689995 44499999999
Q ss_pred HHHHHHHHhc
Q 018172 341 LERLSAIQGG 350 (360)
Q Consensus 341 ~~~l~~~~~~ 350 (360)
+++|.+++.+
T Consensus 386 ~~~l~~~l~~ 395 (397)
T TIGR03246 386 LARFERAIEQ 395 (397)
T ss_pred HHHHHHHHHH
Confidence 9999998864
No 246
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.78 E-value=1.2e-16 Score=151.61 Aligned_cols=283 Identities=13% Similarity=0.078 Sum_probs=174.9
Q ss_pred cHHHHH----HHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc-HHHHHH--hCCe
Q 018172 38 VPELAE----AINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY-PAETDY--LRSG 110 (360)
Q Consensus 38 ~~~lr~----~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~-~~~~~~--~g~~ 110 (360)
..+|++ .+++++|. ++.++.+++++.++..++.+++++||+ |+++..+|.+. ...++. .+..
T Consensus 72 ~~~lE~~~~~~la~l~g~-------~~alv~~~SG~~A~~~~l~al~~~GD~----Vl~~~~~~~~~~~~g~~~~~~~~~ 140 (416)
T PRK13034 72 VDEVEALAIERAKQLFGC-------DYANVQPHSGSQANGAVYLALLKPGDT----ILGMSLSHGGHLTHGAKVSLSGKW 140 (416)
T ss_pred HHHHHHHHHHHHHHHhCC-------CceEEecCCcHHHHHHHHHHhcCCCCE----EEEcCccceeeeecCCcceeccce
Confidence 478888 99999984 444455677899999999999999998 99999998773 222221 1221
Q ss_pred e--eeec-------CCcccccc---CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC-cC-C-C
Q 018172 111 L--YKWD-------GDANTFDK---NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT-PI-T-G 174 (360)
Q Consensus 111 ~--~~~~-------~~~~~~~~---~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~-~~-~-~ 174 (360)
. ..+. +|.+.++. ..++++|++..+. +|...+ +.+.++|+++|+++++|++|+.+... .. . .
T Consensus 141 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~ 218 (416)
T PRK13034 141 YNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNP 218 (416)
T ss_pred eeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--cccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCC
Confidence 1 2222 23222221 2367888876655 455545 66777888899999999998753221 11 1 1
Q ss_pred CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhcc-ccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHH
Q 018172 175 AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGS-IGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSE 253 (360)
Q Consensus 175 ~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 253 (360)
....+++++|++|.++.+. .|++++.++.+.+.++....... .+.+++...++...+....+ ....+.++++.+
T Consensus 219 ~~~~Di~~~s~~K~l~g~~--GG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~---~~~~~~~~~l~~ 293 (416)
T PRK13034 219 FPHAHVVTTTTHKTLRGPR--GGMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQ---PEFKTYAKQVIA 293 (416)
T ss_pred CCCceEEEEeCcccCCCCC--CeEEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhC---hhHHHHHHHHHH
Confidence 1346899999999984222 38888755565555554332211 12223333333223332111 223456788999
Q ss_pred HHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---h-HHHHHHHHhhCeeeeCC-CC----CCCCCC
Q 018172 254 RWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---D-EDCEKLLRAERIMARGG-RR----FGADAK 324 (360)
Q Consensus 254 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~l~~~gI~~~pg-~~----f~~~~~ 324 (360)
+.+++.+.|++. ++.+..+. +.+..+.+.+.+ . ..+.+.|+++||.+.+- .. +...+.
T Consensus 294 ~a~~l~~~L~~~-G~~~~~~~------------~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~ 360 (416)
T PRK13034 294 NAQALAEVLKER-GYDLVSGG------------TDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTS 360 (416)
T ss_pred HHHHHHHHHHHc-CCEeccCC------------CCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCC
Confidence 999999999887 44443221 111234444433 2 66678899999998741 11 111245
Q ss_pred eEEEEecC------ChHHHHHHHHHHHHHHhch
Q 018172 325 YARVSMLS------REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 325 ~~R~s~~~------~~e~~~~~~~~l~~~~~~~ 351 (360)
.+|+++.. +++++++++++|.+++.+.
T Consensus 361 ~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~~ 393 (416)
T PRK13034 361 GIRIGTPAGTTRGFGEAEFREIANWILDVLDDL 393 (416)
T ss_pred eeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhcC
Confidence 79998633 5899999999999998753
No 247
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=8.4e-17 Score=152.49 Aligned_cols=253 Identities=13% Similarity=0.126 Sum_probs=165.1
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH----HHHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP----AETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~----~~~~~~g~~~~~ 113 (360)
..++++.+++++|. ++.|++++|+ .++.+++..++++||+ |+++...|.+.. ..+...|++++.
T Consensus 71 ~~~le~~la~l~g~-------~~~v~fsSG~-~Ai~~al~~ll~~Gd~----VI~~~~~y~~t~~~~~~~l~~~Gi~v~~ 138 (437)
T PRK05613 71 VEALENRIASLEGG-------VHAVAFASGQ-AAETAAILNLAGAGDH----IVTSPRLYGGTETLFLVTLNRLGIEVTF 138 (437)
T ss_pred HHHHHHHHHHHhCC-------CeEEEeCCHH-HHHHHHHHHhcCCCCE----EEECCCccHHHHHHHHHHHHhcCeEEEE
Confidence 48899999999984 3456666665 7778888888999998 999999999874 345667999998
Q ss_pred ec--CCcccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccccc
Q 018172 114 WD--GDANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKC 188 (360)
Q Consensus 114 ~~--~~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~ 188 (360)
++ .|.+.+.. ++++++|++.++.||+|.+.+ +.+.++|+++|+++|+|.+++.+.. ..+...+.+++++|++|.
T Consensus 139 vd~~~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~-~~p~~~GaDivv~S~~K~ 217 (437)
T PRK05613 139 VENPDDPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL-VRPLELGADVVVASLTKF 217 (437)
T ss_pred ECCCCCHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc-cChHHhCCCEEEeeccce
Confidence 86 23344433 567899999999999998888 7888889889999999999875432 122245679999999999
Q ss_pred cCCCCceEEEEeecCHH-----------------------------------HH-HHHHHHHhhccccCChHHHHHHHHH
Q 018172 189 TGHAGSRIGWALVKDTE-----------------------------------VA-RKMTRFIELGSIGVSKESQLRAAKI 232 (360)
Q Consensus 189 ~~~~G~r~G~~~~~~~~-----------------------------------~~-~~l~~~~~~~~~~~~~~~~~~~~~~ 232 (360)
++..|--+|.+++.+.+ +. +.........+.+.++.....+...
T Consensus 218 l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rg 297 (437)
T PRK05613 218 YTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQG 297 (437)
T ss_pred ecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcc
Confidence 88666555654442211 00 0111222334555666666555443
Q ss_pred hcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcc----ccccccc-CCCCCCcccccCCch-HHHHHHH
Q 018172 233 LGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEY----CNFTGKF-TNSHPGFAWLESKED-EDCEKLL 306 (360)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~l 306 (360)
++ -+.-..++..++...+.+.|.++|.+..+.+++.. +...... ..+.+..+.+.++++ +.+.+.+
T Consensus 298 l~--------TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~ 369 (437)
T PRK05613 298 LD--------TLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVLSFDIKGGKDEAWAFI 369 (437)
T ss_pred cC--------cHHHHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCCceEEEEEecCCHHHHHHHH
Confidence 33 23344455577778899999999876655444321 1111111 112355677777643 4444444
Q ss_pred HhhCe
Q 018172 307 RAERI 311 (360)
Q Consensus 307 ~~~gI 311 (360)
.+-.+
T Consensus 370 ~~l~l 374 (437)
T PRK05613 370 DALKL 374 (437)
T ss_pred HhCCc
Confidence 44343
No 248
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.77 E-value=3.8e-16 Score=148.58 Aligned_cols=279 Identities=17% Similarity=0.132 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh---------cCCCCCCCceEEEeCCCCCCcHHHHHHhCC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL---------SSPGGPEPISVVSAAPYYSQYPAETDYLRS 109 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l---------~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~ 109 (360)
.+|+++++++++. +++++++|+|+++..++.++ +++||+ |+++.|+|..+...+...|+
T Consensus 66 ~~fe~~lA~~~g~--------~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~----VIv~~~t~~a~~~~v~~~G~ 133 (438)
T PRK15407 66 DAFEKKLAEFLGV--------RYALLVNSGSSANLLAFSALTSPKLGDRALKPGDE----VITVAAGFPTTVNPIIQNGL 133 (438)
T ss_pred HHHHHHHHHHhCC--------CeEEEECCHHHHHHHHHHHHhhccccccCCCCCCE----EEECCCCcHHHHHHHHHcCC
Confidence 8999999999985 36889999999999988876 478888 99999999999999999999
Q ss_pred eeeeecCCcccccc---------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC-CCcC-CCCCC
Q 018172 110 GLYKWDGDANTFDK---------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ-YTPI-TGAAD 177 (360)
Q Consensus 110 ~~~~~~~~~~~~~~---------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~-~~~~-~~~~~ 177 (360)
+++.++++.+.+.. ++++++|+++++ +|...+ +.+.++|+++|+++|+|++|+.+. +... .+..+
T Consensus 134 ~pv~vdvd~~~~~id~~~le~~i~~~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g 210 (438)
T PRK15407 134 VPVFVDVELPTYNIDASLLEAAVSPKTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFG 210 (438)
T ss_pred EEEEEecCCCcCCcCHHHHHHHcCcCCeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccC
Confidence 99988876433322 368899988764 555555 677788898999999999998543 2211 12222
Q ss_pred ccEEEeccc--cccCCCCceEEEEeecCHHHHHHHHHHHhhccc-----------------------------------c
Q 018172 178 HDIMLFTLS--KCTGHAGSRIGWALVKDTEVARKMTRFIELGSI-----------------------------------G 220 (360)
Q Consensus 178 ~~i~~~S~s--K~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~-----------------------------------~ 220 (360)
++.++||+ |.+. +|- .|++++.++++.+.++..+..+.. +
T Consensus 211 -d~~~fSf~~~k~~~-~ge-GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 287 (438)
T PRK15407 211 -DIATLSFYPAHHIT-MGE-GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLG 287 (438)
T ss_pred -ceEEEeCCCCCCcc-ccC-ceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccc
Confidence 56677775 6665 454 599999888888888766543210 0
Q ss_pred CC-hHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC-cccCC-CCCcccccccccCCCCCCcccccCC
Q 018172 221 VS-KESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGV-FGLPE-YPLEYCNFTGKFTNSHPGFAWLESK 297 (360)
Q Consensus 221 ~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (360)
.| .++...|+-.+..+ +.+++..++-+++.+++.+.|..+++ +..+. +.+...+|. .+.+.++
T Consensus 288 ~n~rmsel~AAig~~qL-----~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~---------~~~i~~~ 353 (438)
T PRK15407 288 YNLKITDMQAAIGLAQL-----EKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWF---------GFPITVK 353 (438)
T ss_pred cccCccHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEE---------EEEEEEC
Confidence 00 12222233333322 45556666666666777777877653 22222 122211110 1122222
Q ss_pred c-----hHHHHHHHHhhCeeeeCCCC--------CCC---------------CCCeEEEEecC--ChHHHHHHHHHHHHH
Q 018172 298 E-----DEDCEKLLRAERIMARGGRR--------FGA---------------DAKYARVSMLS--REEIFNIFLERLSAI 347 (360)
Q Consensus 298 ~-----~~~~~~~l~~~gI~~~pg~~--------f~~---------------~~~~~R~s~~~--~~e~~~~~~~~l~~~ 347 (360)
+ .+.+.+.|.++||.+++... |.. ....+-+.+.. ++++++..+++++++
T Consensus 354 ~~~~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~ 433 (438)
T PRK15407 354 EDAGFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEF 433 (438)
T ss_pred CcCCCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHH
Confidence 1 27888899999998764321 100 01124444433 889999999999998
Q ss_pred Hh
Q 018172 348 QG 349 (360)
Q Consensus 348 ~~ 349 (360)
+.
T Consensus 434 ~~ 435 (438)
T PRK15407 434 FG 435 (438)
T ss_pred Hh
Confidence 75
No 249
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.77 E-value=1.6e-16 Score=152.53 Aligned_cols=280 Identities=13% Similarity=0.033 Sum_probs=181.9
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEEc---CChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHH----------h
Q 018172 41 LAEAINNLHHVVDNAVSDGRHIVIG---TGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDY----------L 107 (360)
Q Consensus 41 lr~~la~~~~~~~~~~~~~~~i~~t---~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~----------~ 107 (360)
.|+.++++++. +++++.++ +|+++++..++.+++++||+ |++....|......... .
T Consensus 85 ar~~~a~lf~a------~~~~~~~~~~~~sgt~an~~v~~al~~~gd~----Ii~~~~ehg~~l~~~~~l~~~~~~~~~~ 154 (452)
T PTZ00094 85 CQKRALEAFGL------DPEEWGVNVQPYSGSPANFAVYTALLQPHDR----IMGLDLPSGGHLTHGFYTAKKKVSATSI 154 (452)
T ss_pred HHHHHHHHhCC------CcccceeecCCCchHHHHHHHHHHhcCCCCE----EEecccccCCccccccccccccccccee
Confidence 56688888886 44567666 78899999999999999998 99988888776554321 1
Q ss_pred CCeeeeecCCcc------cccc---CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCC---C
Q 018172 108 RSGLYKWDGDAN------TFDK---NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPIT---G 174 (360)
Q Consensus 108 g~~~~~~~~~~~------~~~~---~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~---~ 174 (360)
++++..++.+.+ .+.. ..+++++++. ++.+|...+ +.+.++|+++|+++++|++|+.+..+... .
T Consensus 155 ~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~ 232 (452)
T PTZ00094 155 YFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSP 232 (452)
T ss_pred eeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCC
Confidence 133334444322 2211 2356777654 234998888 77888899899999999999865442211 1
Q ss_pred CCCccEEEecccccc-CCCCceEEEEeecCHHHHHHHHHHHh-----hccccCChHHHHHHHHHhcccCCCchhHHHHHH
Q 018172 175 AADHDIMLFTLSKCT-GHAGSRIGWALVKDTEVARKMTRFIE-----LGSIGVSKESQLRAAKILGIVSDDYPNFFEYGR 248 (360)
Q Consensus 175 ~~~~~i~~~S~sK~~-~~~G~r~G~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 248 (360)
..+.+++++|++|++ |+.| |++++ ..++.+.+..... ....+.+.....++.++++.+.. ...++.+
T Consensus 233 ~~~~D~l~~S~hK~l~GP~G---g~l~~-~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~---~~~~~~~ 305 (452)
T PTZ00094 233 FPYADVVTTTTHKSLRGPRS---GLIFY-RKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQS---PEWKEYA 305 (452)
T ss_pred CCCCcEEEcCCccCCCCCCc---eEEEE-ecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhC---hhHHHHH
Confidence 236789999999976 5443 87777 4444443322111 11124455555556666765532 4567788
Q ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeee-eCCCCCC---CC
Q 018172 249 RLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMA-RGGRRFG---AD 322 (360)
Q Consensus 249 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~-~pg~~f~---~~ 322 (360)
+++.++.+++.+.|++. ++.+..+... .....+.+..++ .+.+..+|.++||.+ +++...+ ..
T Consensus 306 ~~i~~l~~~l~~~L~~~-g~~v~~~~~~----------~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~ 374 (452)
T PTZ00094 306 KQVLKNAKALAAALEKR-GYDLVTGGTD----------NHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALN 374 (452)
T ss_pred HHHHHHHHHHHHHHHhC-CcEEecCCCC----------CceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCC
Confidence 89999999999999876 4444322100 011122233332 378888898889999 4554432 13
Q ss_pred CCeEEEEecC------ChHHHHHHHHHHHHHHhc
Q 018172 323 AKYARVSMLS------REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 323 ~~~~R~s~~~------~~e~~~~~~~~l~~~~~~ 350 (360)
++.+|+|+.. +++|++++++.|.+++..
T Consensus 375 ~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 375 PSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred CCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 5789999843 389999999999999974
No 250
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.76 E-value=1.8e-16 Score=147.73 Aligned_cols=287 Identities=12% Similarity=0.111 Sum_probs=187.7
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEc-CChHHHHHHHHHhhcCCCCCCCceEEEeCCCCC-CcHHHHHHh--CCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIG-TGSTQLYQAALYALSSPGGPEPISVVSAAPYYS-QYPAETDYL--RSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t-~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~-~~~~~~~~~--g~~~~~ 113 (360)
+.+.|+.++++++. .++++|+++ +|+|.+++.++..++.+ +. +++..-.|. .+...+... +.++..
T Consensus 43 ~~~~r~~l~~l~~~-----~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~----l~i~~G~~~~~~~~~a~~~~~~~~~~~ 112 (361)
T TIGR01366 43 VGRVREGLAELFSL-----PDGYEVILGNGGATAFWDAATFGLIEK-KS----LHLSFGEFSSKFAKAVKLAPWLGEPII 112 (361)
T ss_pred HHHHHHHHHHHhCC-----CCCceEEEECCchhHHHHHHHHhcccc-cc----cEEecCHHHHHHHHHHHhhhccCCceE
Confidence 38889999999985 123478886 66999999999999743 22 445555554 233444442 235555
Q ss_pred ecCCc-cccc--cCCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGDA-NTFD--KNNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~~-~~~~--~~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+. +.++ .++++++|++++-+|.||...+ +++ ++++|+++++|.+.+.++.+...+. .+++++|.+|.+
T Consensus 113 ~~~~~~~~~~~~~~~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~~--~D~~~~s~~K~l 187 (361)
T TIGR01366 113 VTADPGSAPEPQADPGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIAE--TDVYYFAPQKNF 187 (361)
T ss_pred EecCCCCCCCCccCCCCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCCCCCHHH--CCEEEEEchhhc
Confidence 55442 2222 2568999999999999999998 333 4669999999999987765554443 789999999999
Q ss_pred CCCCceEEEEeecCHHHHHHHHHHHh---------------------hccccCChHHHHHHHHHhcccCCCchhHHHHHH
Q 018172 190 GHAGSRIGWALVKDTEVARKMTRFIE---------------------LGSIGVSKESQLRAAKILGIVSDDYPNFFEYGR 248 (360)
Q Consensus 190 ~~~G~r~G~~~~~~~~~~~~l~~~~~---------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 248 (360)
|.+| .++.++. ++++.+.+..... .+..+++.....++.++++.+... .-++...
T Consensus 188 g~~~-Gl~~~~~-s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~--gg~e~~~ 263 (361)
T TIGR01366 188 ASDG-GLWLAIM-SPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGN--GGLDWAV 263 (361)
T ss_pred CCCC-ceEEEEE-CHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHc--cCHHHHH
Confidence 9775 2555566 6777766542210 011222333333556677665431 2377888
Q ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEE
Q 018172 249 RLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYARV 328 (360)
Q Consensus 249 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~ 328 (360)
++.+++.+++++.+.+.+++......... ..+..+.+.+.+--+.+++.+.|+++||.+.++... ...+.+|+
T Consensus 264 ~r~~~l~~~l~~~l~~~~~~~~~~~~~~~------~s~~v~~v~~~~g~~~~~v~~~L~~~gI~i~~~~~~-l~~~~vRi 336 (361)
T TIGR01366 264 ARTADSSSRLYSWAQERPYATPFVTDPGK------RSQVVGTIDFVDDIDAATVAKILRANGIVDTEPYRK-LGRNQLRV 336 (361)
T ss_pred HHHHHHHHHHHHHHHhCCCcccCCCChhh------cccceEEEECCCccCHHHHHHHHHHCCCeeccCccc-cCCCcEEE
Confidence 99999999999999999754433211100 000111122211112377888889999999876422 23568999
Q ss_pred EecC--ChHHHHHHHHHHHHHHhc
Q 018172 329 SMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 329 s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
|+.. +++++++++++|++++++
T Consensus 337 s~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 337 AMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred EcCCCCCHHHHHHHHHHHHHHHhh
Confidence 9866 999999999999998765
No 251
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.76 E-value=2e-16 Score=151.63 Aligned_cols=270 Identities=14% Similarity=0.087 Sum_probs=167.0
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHHHh-CC-------------eeeeecCC-----cc
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETDYL-RS-------------GLYKWDGD-----AN 119 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~-----~~ 119 (360)
+.+.++++++++...+++.... .|.. +|+.-..+|......+-.. +- .+..++.. ..
T Consensus 116 ~~v~f~~sGseA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (451)
T PRK06918 116 KKVLFLNSGAEAVENAVKIARKYTKRQ---GIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPE 192 (451)
T ss_pred CEEEEcCCcHHHHHHHHHHHHHHhCCC---cEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccc
Confidence 4799999999999999887642 1222 3887777777765443332 21 01111111 01
Q ss_pred cc-------------c------cCCCeeEEEEcCCCCCC-cccch-----HHHHHHhhhcCcEEEEeecccCCCCCc--C
Q 018172 120 TF-------------D------KNNGAYIEVVNSPNNPD-GTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTP--I 172 (360)
Q Consensus 120 ~~-------------~------~~~~~~~i~~~~p~NPt-G~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~--~ 172 (360)
+. + ..++..+.++..|.... |.+++ +.+.++|+++|+++|+||+|.+..... .
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~ 272 (451)
T PRK06918 193 GLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYF 272 (451)
T ss_pred cCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCcee
Confidence 10 0 01233455555665554 65554 356789999999999999998532211 1
Q ss_pred C-CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCC-CchhHHHHHHHH
Q 018172 173 T-GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSD-DYPNFFEYGRRL 250 (360)
Q Consensus 173 ~-~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~ 250 (360)
. ...+..--+.|+||.++ +|+|+||+++ ++++++.+.......+++.+++.|.++.++++.+.+ .+.+++.++.+.
T Consensus 273 a~~~~~v~pDi~t~sK~l~-~G~pig~v~~-~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~ 350 (451)
T PRK06918 273 AIEHFDVVPDLITVSKSLG-AGVPISGVIG-RKEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKV 350 (451)
T ss_pred hhHhcCCCCCEEeeehhhc-CCCccEEEEE-cHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 1 11221122568999999 9999999999 889988886555567889999999999888886633 222333333333
Q ss_pred HHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccc-----cCCch---HHHHHHHHhhCeeeeCCCCCCCC
Q 018172 251 MSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWL-----ESKED---EDCEKLLRAERIMARGGRRFGAD 322 (360)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~l~~~gI~~~pg~~f~~~ 322 (360)
++++.+ +...+++.+.-....|.++.+. +. ..++. ..+.+.+.++||.+.|+..|+
T Consensus 351 l~~~l~---~l~~~~~~~~~vrg~G~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~~-- 414 (451)
T PRK06918 351 VMNRFE---EMKNKYNCIGDVRGLGAMCAFE-----------LVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTYG-- 414 (451)
T ss_pred HHHHHH---HHHhhCCCceeeccceeEEEEE-----------EccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCCC--
Confidence 333333 2222333222233344442221 11 11222 456667788999999976664
Q ss_pred CCeEEEEec--CChHHHHHHHHHHHHHHhch
Q 018172 323 AKYARVSML--SREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 323 ~~~~R~s~~--~~~e~~~~~~~~l~~~~~~~ 351 (360)
+++||+++ .+++++++++++|.+++.+.
T Consensus 415 -~~lrl~p~l~~t~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 415 -NVIRVLMPLVITDEQLEEGLTIIEESLQAC 444 (451)
T ss_pred -CEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 58999874 48999999999999999764
No 252
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.76 E-value=2.3e-16 Score=148.90 Aligned_cols=265 Identities=15% Similarity=0.063 Sum_probs=173.6
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCC-CCCceEEEeCCCCCCcHHHHHH-hCCee------------eeecC-Cccc
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGG-PEPISVVSAAPYYSQYPAETDY-LRSGL------------YKWDG-DANT 120 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd-~~~~~vl~~~p~~~~~~~~~~~-~g~~~------------~~~~~-~~~~ 120 (360)
+.+++++++++++..+++.... .|. ..+.+|+.-..+|......+-. .|... ..++. |.+.
T Consensus 99 ~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 178 (408)
T PRK04612 99 EKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEA 178 (408)
T ss_pred CEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHH
Confidence 5799999999999999887642 221 1112488888877776544332 22111 11111 1111
Q ss_pred ccc--CCCeeEEEEcCCCCCCcccch------HHHHHHhhhcCcEEEEeecccCCCCCc--CC-CCCCccEEEecccccc
Q 018172 121 FDK--NNGAYIEVVNSPNNPDGTIRE------AVLAKVNRSAEGKLIHDLAYYWPQYTP--IT-GAADHDIMLFTLSKCT 189 (360)
Q Consensus 121 ~~~--~~~~~~i~~~~p~NPtG~~~~------~~~~~~~~~~~~~li~D~ay~~~~~~~--~~-~~~~~~i~~~S~sK~~ 189 (360)
++. .++..+.++..|.+++|-+++ +.+.++|+++|+++|+||+|.+..... .. ...+.+..+.+|+|.+
T Consensus 179 l~~~~~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l 258 (408)
T PRK04612 179 LEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKAL 258 (408)
T ss_pred HHHhhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchh
Confidence 211 234577788888888886654 356788999999999999998432211 11 1234567789999999
Q ss_pred CCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhc----
Q 018172 190 GHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQS---- 265 (360)
Q Consensus 190 ~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---- 265 (360)
+ +|+++||+++ ++++++.+.......+++.+++.+.++.+.|+.+.+. +..++++++-+++.+.|+++
T Consensus 259 ~-~G~piga~~~-~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~------~l~~~~~~~g~~l~~~l~~l~~~~ 330 (408)
T PRK04612 259 G-GGFPIGAMLA-GPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASP------QIAANVARQSAALRAGLEALNAEF 330 (408)
T ss_pred c-CCCceEEEEE-CHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhc------cHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9 8999999998 7888888766555567788999999999999866432 34444555555555555443
Q ss_pred CCcccCCCCCcccccccccCCCCCCcccccCC----c-hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEe--cCChHHHH
Q 018172 266 GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK----E-DEDCEKLLRAERIMARGGRRFGADAKYARVSM--LSREEIFN 338 (360)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~--~~~~e~~~ 338 (360)
+.+.-. .+.+.++.+.+. + ...+.+.+.++||.+.|. +.+.+|+.. ..++++++
T Consensus 331 ~~i~~v--------------rg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~-----g~~~lRl~Ppl~it~eeid 391 (408)
T PRK04612 331 GVFAQV--------------RGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQA-----GPDVLRFVPALNLTDAELA 391 (408)
T ss_pred CCeeee--------------eccceEEEEEecCchhhHHHHHHHHHHHCCeEEeeC-----CCCEEEEcCCccCCHHHHH
Confidence 222112 233334444442 1 156777888999999762 246899975 34999999
Q ss_pred HHHHHHHHHHhch
Q 018172 339 IFLERLSAIQGGS 351 (360)
Q Consensus 339 ~~~~~l~~~~~~~ 351 (360)
++++++.+.+.+.
T Consensus 392 ~~l~~l~~~l~~~ 404 (408)
T PRK04612 392 DGLARLRLALADY 404 (408)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998653
No 253
>PLN02624 ornithine-delta-aminotransferase
Probab=99.75 E-value=1.5e-16 Score=153.04 Aligned_cols=269 Identities=13% Similarity=0.047 Sum_probs=165.8
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-----CCCC-CCceEEEeCCCCCCcHHHHHHhCCe-------------eeeecC-Ccc
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-----PGGP-EPISVVSAAPYYSQYPAETDYLRSG-------------LYKWDG-DAN 119 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-----~gd~-~~~~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~-~~~ 119 (360)
+.+++++++++++..+++.... .|.. ...+|+...-+|......+.....+ +..++. |.+
T Consensus 133 ~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~ 212 (474)
T PLN02624 133 DMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDLD 212 (474)
T ss_pred CeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCCHH
Confidence 4789999999999999875542 1100 0123666666676654333222111 112221 222
Q ss_pred cccc-----CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCc--CC-CCCCccEEEeccc
Q 018172 120 TFDK-----NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTP--IT-GAADHDIMLFTLS 186 (360)
Q Consensus 120 ~~~~-----~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~--~~-~~~~~~i~~~S~s 186 (360)
.++. .+++.+|++..++|++|.+++ +.+.++|++||+++|+||+|.+..... .. ...+...-+.+++
T Consensus 213 ~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~ls 292 (474)
T PLN02624 213 ALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVILG 292 (474)
T ss_pred HHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEec
Confidence 2211 256888999999999999877 356788999999999999998421111 11 1112122244478
Q ss_pred cccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHh--
Q 018172 187 KCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQ-- 264 (360)
Q Consensus 187 K~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-- 264 (360)
|.++..++++|++++ ++++++.+.......+++.+++.+.++.+.++.+.+. . ..+...++.+.+.+.|.+
T Consensus 293 K~lggG~~pigav~~-~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~--~----l~~~~~~~~~~l~~~L~~l~ 365 (474)
T PLN02624 293 KALGGGVIPVSAVLA-DKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDE--K----LAERSAKLGQELRDQLQKIQ 365 (474)
T ss_pred ccccCCCCcceeeee-cHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhc--h----HHHHHHHHHHHHHHHHHHHH
Confidence 999966699999998 7888887765544456678999999999988865432 2 222333333344443333
Q ss_pred --cCC-cccCCCCCcccccccccCCCCCCcccccCC----ch-HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEe--cCCh
Q 018172 265 --SGV-FGLPEYPLEYCNFTGKFTNSHPGFAWLESK----ED-EDCEKLLRAERIMARGGRRFGADAKYARVSM--LSRE 334 (360)
Q Consensus 265 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~--~~~~ 334 (360)
++. +....+.|.+.. ++++.+ .. ..+.+.|.++||.+.|+. .+++||++ ..++
T Consensus 366 ~~~~~~i~~vrg~G~~~~------------i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~~-----~~~lR~~p~l~~t~ 428 (474)
T PLN02624 366 KQFPKLIKEVRGRGLLNA------------VVLNSPKLGPVSAYDVCLKLKERGLLAKPTH-----DTIIRLAPPLSISE 428 (474)
T ss_pred HhCCCceEEEEeeEEEEE------------EEecCCCcChHHHHHHHHHHHhCCeEEecCC-----CCEEEEECCccCCH
Confidence 321 111122232211 122221 11 456667889999998852 56899986 4499
Q ss_pred HHHHHHHHHHHHHHhchh
Q 018172 335 EIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 335 e~~~~~~~~l~~~~~~~~ 352 (360)
+++++++++|.+++....
T Consensus 429 e~id~~l~~L~~~l~~~~ 446 (474)
T PLN02624 429 DELQECSKALSDVLEHDL 446 (474)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999997543
No 254
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.75 E-value=2.8e-16 Score=149.33 Aligned_cols=266 Identities=12% Similarity=0.058 Sum_probs=171.7
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHHHh-CC-------------eeeeecCC--c----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETDYL-RS-------------GLYKWDGD--A---- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~--~---- 118 (360)
+.+++++++++++..+++.... .|.. +|+.-..+|......+-.. |. .+..++.. .
T Consensus 102 ~~~~f~~sGseA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~ 178 (421)
T PRK09792 102 AKTAFFTTGAEAVENAVKIARAHTGRP---GVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGIS 178 (421)
T ss_pred ceEEEeCChHHHHHHHHHHHHHhcCCC---eEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccccc
Confidence 4789999999999998887742 2322 4888887777765333222 21 11222221 1
Q ss_pred -----ccccc-------CCCeeEEEEcCCCCCCcccc-h----HHHHHHhhhcCcEEEEeecccCCCCCc--CC-CCCCc
Q 018172 119 -----NTFDK-------NNGAYIEVVNSPNNPDGTIR-E----AVLAKVNRSAEGKLIHDLAYYWPQYTP--IT-GAADH 178 (360)
Q Consensus 119 -----~~~~~-------~~~~~~i~~~~p~NPtG~~~-~----~~~~~~~~~~~~~li~D~ay~~~~~~~--~~-~~~~~ 178 (360)
+.++. ..+..+|++.-.++|+|..+ + +.+.++|+++|+++|+||++.+..... .. ...+.
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~ 258 (421)
T PRK09792 179 TQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYAD 258 (421)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCC
Confidence 11111 13456777766689999876 4 467789999999999999998532211 11 11111
Q ss_pred cEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 179 DIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 179 ~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
.--+.+|+|.++ +|+++||+++ +.++++.+.......+++.|++++.++.+.++.+.+. .+++++++.-.+.++.+
T Consensus 259 ~pDi~t~gK~l~-~G~pigav~~-~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~--~~~~~~~~~g~~l~~~l 334 (421)
T PRK09792 259 KPDLMTMAKSLA-GGMPLSGVVG-NANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKE--SLCERANQLGQRLKNTL 334 (421)
T ss_pred CCcEEEeehhhc-CCCceEEEEE-cHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHH
Confidence 111689999999 9999999998 8999888765555567889999999888888876554 55666653333333333
Q ss_pred HHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch----------HHHHHHHHhhCeeeeCCCCCCCCCCeEEE
Q 018172 259 RQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED----------EDCEKLLRAERIMARGGRRFGADAKYARV 328 (360)
Q Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~~gI~~~pg~~f~~~~~~~R~ 328 (360)
.+...+++.+ ..+. +.+.++|+.+++. ..+...+.++||.+.+. +...+.+||
T Consensus 335 ~~l~~~~p~v--~~vr------------G~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~---g~~~~~irl 397 (421)
T PRK09792 335 IDAKESVPAI--AAVR------------GLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTC---GAYGNVIRF 397 (421)
T ss_pred HHHHHhCCCc--ceec------------ccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeec---CCCCCEEEE
Confidence 3333345432 2222 3345677776421 45667778899998642 222468999
Q ss_pred EecC--ChHHHHHHHHHHHHHHh
Q 018172 329 SMLS--REEIFNIFLERLSAIQG 349 (360)
Q Consensus 329 s~~~--~~e~~~~~~~~l~~~~~ 349 (360)
.... ++++++++++++.+++.
T Consensus 398 ~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 398 LYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred eCCCcCCHHHHHHHHHHHHHHHh
Confidence 8643 89999999999999874
No 255
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.75 E-value=1e-16 Score=145.06 Aligned_cols=271 Identities=17% Similarity=0.129 Sum_probs=189.3
Q ss_pred CCcEEEcCChHHHHHHHHHhhcCCCC-CCCceEEEeCCCCCCcHHHHHHhCCeee-------------eec-CCcccccc
Q 018172 59 GRHIVIGTGSTQLYQAALYALSSPGG-PEPISVVSAAPYYSQYPAETDYLRSGLY-------------KWD-GDANTFDK 123 (360)
Q Consensus 59 ~~~i~~t~G~t~~l~~~~~~l~~~gd-~~~~~vl~~~p~~~~~~~~~~~~g~~~~-------------~~~-~~~~~~~~ 123 (360)
.+.|+++++++|++..+++...+-+. .+..+|+....+|..-.-.+-..+.+.+ .+| .|.+.++.
T Consensus 100 ~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ 179 (404)
T COG4992 100 ADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEA 179 (404)
T ss_pred ccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHH
Confidence 56899999999999999988743222 2223577777777655433333333332 111 12233322
Q ss_pred --CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCC-CCcCC--CCCCccEEEeccccccCCCC
Q 018172 124 --NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQ-YTPIT--GAADHDIMLFTLSKCTGHAG 193 (360)
Q Consensus 124 --~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~-~~~~~--~~~~~~i~~~S~sK~~~~~G 193 (360)
+++|.+|++-.-+---|++.+ +.++++|+++|+++|.||++.+-. ...+. ...+..-=+.++.|.+| .|
T Consensus 180 ai~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tlaK~Lg-GG 258 (404)
T COG4992 180 AIDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLAKALG-GG 258 (404)
T ss_pred HhccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEeecccc-CC
Confidence 468999999888888998876 467789999999999999998522 11111 12222223567789999 99
Q ss_pred ceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCC
Q 018172 194 SRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEY 273 (360)
Q Consensus 194 ~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 273 (360)
+.+|.+++ .+...+.+......++++.|+++..++.++++.+.+. ..+++.++.=...++.|.+...+++.+.
T Consensus 259 ~PigA~la-~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e--~ll~~v~~~g~~~~~~L~~l~~~~~~v~---- 331 (404)
T COG4992 259 FPIGAMLA-TEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEE--GLLENVREKGEYLLQRLRELKRRYPLVK---- 331 (404)
T ss_pred ccceeeEE-chhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcch--hHHHHHHHHHHHHHHHHHHHhhcCCcee----
Confidence 99999999 6776777777777789999999999999999977664 5666555554444444444444443111
Q ss_pred CCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEe--cCChHHHHHHHHHHHHHH
Q 018172 274 PLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARVSM--LSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~ 348 (360)
.+++.+.++-+.+... ..+.+.++++|+++.+.. ++.+||.. ..++|+++++++++++++
T Consensus 332 ----------~vRG~GLmiGiel~~~~~a~~~~~~~~~~gvL~~~a~-----~~ViR~~PpL~i~~eei~~~~~~l~~~l 396 (404)
T COG4992 332 ----------EVRGRGLMIGIELKEPYRARDIVRALREEGVLVLPAG-----PNVIRFLPPLVITEEEIDEALDALERAL 396 (404)
T ss_pred ----------eeecceeEEEEEecCcccHHHHHHHHHHCCeEEecCC-----CCeEEecCCccCCHHHHHHHHHHHHHHH
Confidence 3446666777777654 788899999999998743 66999965 339999999999999999
Q ss_pred hchh
Q 018172 349 GGSI 352 (360)
Q Consensus 349 ~~~~ 352 (360)
.+..
T Consensus 397 ~~~~ 400 (404)
T COG4992 397 AAAS 400 (404)
T ss_pred HHhh
Confidence 8754
No 256
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.75 E-value=2.2e-15 Score=138.58 Aligned_cols=254 Identities=14% Similarity=0.113 Sum_probs=174.1
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHH----hCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDY----LRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~----~g~~~~~ 113 (360)
...|+++++.+.+. + +.+.++++..|+..++..++++||+ |+++...|......+.. .|.++..
T Consensus 65 ~~~lE~~~a~LEg~-------~-~~~afsSGmaAI~~~~l~ll~~GD~----vl~~~~~YG~t~~~~~~~l~~~gi~~~~ 132 (396)
T COG0626 65 RDALEEALAELEGG-------E-DAFAFSSGMAAISTALLALLKAGDH----VLLPDDLYGGTYRLFEKILQKFGVEVTF 132 (396)
T ss_pred HHHHHHHHHHhhCC-------C-cEEEecCcHHHHHHHHHHhcCCCCE----EEecCCccchHHHHHHHHHHhcCeEEEE
Confidence 38899999999873 3 5777777899999999999999999 99999999988776544 6888887
Q ss_pred ecCCcc-cccc--C-CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccccc
Q 018172 114 WDGDAN-TFDK--N-NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKC 188 (360)
Q Consensus 114 ~~~~~~-~~~~--~-~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~ 188 (360)
++.... .... . ++|++|++-+|+|||..+.+ +.+.++++++|+++|+|+.|..+- ..-+-..+.+|++.|.+|.
T Consensus 133 ~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~-~q~PL~~GaDIVvhSaTKy 211 (396)
T COG0626 133 VDPGDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPV-LQRPLELGADIVVHSATKY 211 (396)
T ss_pred ECCCChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCccccc-ccChhhcCCCEEEEecccc
Confidence 764322 2222 2 58999999999999999999 788888998999999999988532 2222356789999999998
Q ss_pred cCC-CCceEEEEeecCHHHHHHHHHHHh-hccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 018172 189 TGH-AGSRIGWALVKDTEVARKMTRFIE-LGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSG 266 (360)
Q Consensus 189 ~~~-~G~r~G~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 266 (360)
++- ...=.|.++++++++.+.+..... ..+...++.....+...++ . +.-.-++..++...+.+.|.+++
T Consensus 212 l~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlk-------T-L~~Rm~~~~~nA~~IA~~L~~~p 283 (396)
T COG0626 212 LGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLR-------T-LALRMERHNENALKIAEFLADHP 283 (396)
T ss_pred ccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccc-------h-HHHHHHHHHHHHHHHHHHHhcCC
Confidence 863 444456566556677777644444 3566677777766655444 2 23333444566788888888887
Q ss_pred CcccCCCCCcc----cccccccCCCCCCcccccCCchHHHHHHHHhhCee
Q 018172 267 VFGLPEYPLEY----CNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIM 312 (360)
Q Consensus 267 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~ 312 (360)
.+..+.++|-. +.+......+.+..+.+.+.+++.+.+.+++-.+.
T Consensus 284 ~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~l~ 333 (396)
T COG0626 284 KVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLKLF 333 (396)
T ss_pred CeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCCcc
Confidence 77665554411 11111111134556778887743344444443433
No 257
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.74 E-value=5.4e-16 Score=144.92 Aligned_cols=277 Identities=18% Similarity=0.145 Sum_probs=183.8
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG 116 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 116 (360)
..++++++++++|. .+++.++++|.||++++.++ +++||+ |++|.-+|.....++...|++++.+++
T Consensus 27 ~~~fE~~~a~~~g~--------~~~~~~~sgt~Al~~al~~l~~~~gde----Vi~p~~t~~~~~~ai~~~G~~pv~~Di 94 (363)
T PF01041_consen 27 VEEFEKEFAEYFGV--------KYAVAVSSGTSALHLALRALGLGPGDE----VIVPAYTFPATASAILWAGAEPVFVDI 94 (363)
T ss_dssp HHHHHHHHHHHHTS--------SEEEEESSHHHHHHHHHHHTTGGTTSE----EEEESSS-THHHHHHHHTT-EEEEE-B
T ss_pred HHHHHHHHHHHhCC--------CeEEEeCChhHHHHHHHHhcCCCcCce----EecCCCcchHHHHHHHHhccEEEEEec
Confidence 49999999999995 47888888999999999998 578998 999999999999999999999999998
Q ss_pred CccccccC---------CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC-CcCCCCCCccEEEecc
Q 018172 117 DANTFDKN---------NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY-TPITGAADHDIMLFTL 185 (360)
Q Consensus 117 ~~~~~~~~---------~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~-~~~~~~~~~~i~~~S~ 185 (360)
|++.+..+ +++++|++.+ .-|...+ +.+.++|+++|+++|+|.+++.+.. ....-....++.++||
T Consensus 95 ~~~~~~id~~~~~~~i~~~t~ai~~~h---~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf 171 (363)
T PF01041_consen 95 DPETLNIDPEALEKAITPKTKAILVVH---LFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFGDIAIFSF 171 (363)
T ss_dssp ETTTSSB-HHHHHHHHHTTEEEEEEE----GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSSSEEEEES
T ss_pred cCCcCCcCHHHHHHHhccCccEEEEec---CCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCCCceEecC
Confidence 87766553 6899999655 5677766 6778888889999999999986431 1111112337778887
Q ss_pred --ccccCCCCceEEEEeecCHHHHHHHHHHHhhccc-------------cC-ChHHHHHHHHHhcccCCCchhHHHHHHH
Q 018172 186 --SKCTGHAGSRIGWALVKDTEVARKMTRFIELGSI-------------GV-SKESQLRAAKILGIVSDDYPNFFEYGRR 249 (360)
Q Consensus 186 --sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~-------------~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 249 (360)
+|.+. +| ..|.+++.++++.+.++.++..+.. +. ..+....|+-.+..+ +.+++..+
T Consensus 172 ~~~K~i~-~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL-----~~L~~~~~ 244 (363)
T PF01041_consen 172 HPTKIIT-TG-EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQL-----KRLDEIIA 244 (363)
T ss_dssp STTSSS--SS-S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHH-----HTHHHHHH
T ss_pred CCCCCCc-CC-CCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHH-----HHhhhhHH
Confidence 58775 44 3588999889999999887753311 11 122222333333322 55666777
Q ss_pred HHHHHHHHHHHHHHhcCCcccCC-CCCcc-cccccccCCCCCCcccccCCc-----hHHHHHHHHhhCeeeeCCCC--CC
Q 018172 250 LMSERWNMLRQVIRQSGVFGLPE-YPLEY-CNFTGKFTNSHPGFAWLESKE-----DEDCEKLLRAERIMARGGRR--FG 320 (360)
Q Consensus 250 ~~~~~~~~l~~~l~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~gI~~~pg~~--f~ 320 (360)
.-+++.+++.+.|..++++.... +.+.. .++. .+.+.+++ .+.+.+.|+++||.+.+... ..
T Consensus 245 ~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~---------~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~ 315 (363)
T PF01041_consen 245 RRRENAQRYREALAGIPGIKPPPIPDGAERSSYY---------RFPIRLPDEALADRDELVEALRARGIETRPHYPKPLH 315 (363)
T ss_dssp HHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCES---------SEEEEETCCGCSTHHHHHHHHHHTTBEEBCSTSSCGG
T ss_pred HHHHHHHHHHHHHhcCCCcccccccccccccccc---------cccccccccccchHHHHHHHHHHCCCcccccccCchh
Confidence 77788888889999987664322 22211 1111 12233332 38889999999999987552 10
Q ss_pred ------C-----C----------CCeEEEEecC--ChHHHHHHHHHHH
Q 018172 321 ------A-----D----------AKYARVSMLS--REEIFNIFLERLS 345 (360)
Q Consensus 321 ------~-----~----------~~~~R~s~~~--~~e~~~~~~~~l~ 345 (360)
. . ...+.+.+.. +++++++.+++|+
T Consensus 316 ~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 316 RQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp GSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred hhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 0 0 1136666544 8899998888774
No 258
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.74 E-value=3.9e-16 Score=145.20 Aligned_cols=279 Identities=12% Similarity=0.064 Sum_probs=193.4
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEc-CChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc--HHHHHHhCCeeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIG-TGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY--PAETDYLRSGLYKW 114 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t-~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~--~~~~~~~g~~~~~~ 114 (360)
.++.++.++++++. .+..+|+++ ++++.++..++..++.+|++ +++........ ..+++..|.. ..+
T Consensus 50 ~~~~~~~l~~l~~~-----~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~----~l~i~~G~fg~r~~~~a~~~g~~-~~~ 119 (360)
T PRK05355 50 AEEAEADLRELLNI-----PDNYKVLFLQGGASLQFAMVPMNLLGGGKK----ADYVDTGSWSKKAIKEAKKYGEV-NVA 119 (360)
T ss_pred HHHHHHHHHHHhCC-----CCCcEEEEEcCCchHHHHHHHHhcCCCCCe----EEEEECCHHHHHHHHHHHHhCCc-eEE
Confidence 37788888888873 122346555 78888899999999998887 55554333322 4667778865 433
Q ss_pred cCCc-c---------ccccCCCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEec
Q 018172 115 DGDA-N---------TFDKNNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFT 184 (360)
Q Consensus 115 ~~~~-~---------~~~~~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S 184 (360)
..+. . ....++++++|.+++-.+.||+..++ +.++ +|+++++|.+.+.++.+...+..+ ++++|
T Consensus 120 ~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~~-i~~i---~g~l~vVDavss~g~~~idv~~~d--~~~~s 193 (360)
T PRK05355 120 ASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFHE-LPDT---GDVPLVADMSSDILSRPIDVSKFG--LIYAG 193 (360)
T ss_pred ecccccCCCCCCChhhccCCCCCCEEEEccCCCcceEecCc-cccc---CCCcEEEEcCccccCccCCHHHcc--EEEEe
Confidence 3221 1 11123468999999999999999852 2222 799999999998776665555443 99999
Q ss_pred cccccCCCCceEEEEeecCHHHHHHHHHH-----------H-hhccccCChHHHHHHHHHhcccCCCchh-HHHHHHHHH
Q 018172 185 LSKCTGHAGSRIGWALVKDTEVARKMTRF-----------I-ELGSIGVSKESQLRAAKILGIVSDDYPN-FFEYGRRLM 251 (360)
Q Consensus 185 ~sK~~~~~G~r~G~~~~~~~~~~~~l~~~-----------~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~ 251 (360)
..|.+|++| +|+++. ++++.+.+... . .....++|.....++.++|+.+.+ . .++++.++.
T Consensus 194 sqK~lgP~G--lg~l~~-s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~---~gG~e~i~~r~ 267 (360)
T PRK05355 194 AQKNIGPAG--LTIVIV-REDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKE---QGGVAAMEKRN 267 (360)
T ss_pred ccccccCCc--eEEEEE-CHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHH---ccCHHHHHHHH
Confidence 999999887 888888 67777665431 1 112356677788888888887653 4 589999999
Q ss_pred HHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEE
Q 018172 252 SERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARV 328 (360)
Q Consensus 252 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~ 328 (360)
++..+++++.|++++.+....+... ++ +..+.+.+++. ..+...+.++|+.+.+|.. ..+.+|+
T Consensus 268 ~~l~~~l~~~l~~~~~~~~~~~~~~---------rs-~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~---~~g~vRi 334 (360)
T PRK05355 268 QEKAALLYDAIDSSDFYRNPVAPED---------RS-RMNVPFTLADEELDKKFLAEAKAAGLVGLKGHR---SVGGMRA 334 (360)
T ss_pred HHHHHHHHHHHHhCCCcccCCChhh---------cC-CcEEEEEcCChHHHHHHHHHHHHCCCcccCCCC---ccCcEEE
Confidence 9999999999999974322111100 01 11244555554 4555677889999877653 2468999
Q ss_pred EecC--ChHHHHHHHHHHHHHHhch
Q 018172 329 SMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 329 s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
|+.. +.||+++++++|++++..+
T Consensus 335 S~~~~nt~eei~~l~~~l~~~~~~~ 359 (360)
T PRK05355 335 SIYNAMPLEGVQALVDFMKEFERRH 359 (360)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 9866 8999999999999988653
No 259
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.74 E-value=3.7e-16 Score=148.12 Aligned_cols=261 Identities=12% Similarity=0.045 Sum_probs=170.3
Q ss_pred CcEEEcCChHHHHHHHHHhhcC---------CCCCCCceEEEeCCCCCCc-HHHHHHhC------------CeeeeecC-
Q 018172 60 RHIVIGTGSTQLYQAALYALSS---------PGGPEPISVVSAAPYYSQY-PAETDYLR------------SGLYKWDG- 116 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~---------~gd~~~~~vl~~~p~~~~~-~~~~~~~g------------~~~~~~~~- 116 (360)
+.+++++++++++..++..+.. +|+. +|+..+-+|... ...+...| ..+..++.
T Consensus 95 ~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~---~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (401)
T TIGR01885 95 DKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQA---IIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYN 171 (401)
T ss_pred CEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCC---EEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCC
Confidence 4789999999999999988632 2333 377777776643 34333322 11233322
Q ss_pred Ccccccc-----CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCC--cCC---CCCCccEE
Q 018172 117 DANTFDK-----NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYT--PIT---GAADHDIM 181 (360)
Q Consensus 117 ~~~~~~~-----~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~--~~~---~~~~~~i~ 181 (360)
|.+.++. .++..+|++..+++++|.+.+ +.+.++|+++|+++|+||+|.+.... ... .....+++
T Consensus 172 d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~ 251 (401)
T TIGR01885 172 NLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIV 251 (401)
T ss_pred CHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEE
Confidence 2222221 245678888888999999886 35678999999999999998642111 110 11122333
Q ss_pred EeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHH
Q 018172 182 LFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQV 261 (360)
Q Consensus 182 ~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 261 (360)
+++|.++..++++|++++ ++++++.+.......+++.+++.+.++.++|+.+.+. ..+++.+++.+++.+.
T Consensus 252 --~~gK~l~~g~~~ig~v~~-~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~------~l~~~~~~~~~~~~~~ 322 (401)
T TIGR01885 252 --LLGKALSGGVYPVSAVLA-DDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEE------KLAENAEKLGEIFRDQ 322 (401)
T ss_pred --EeeccccCCCCCcEEEEE-cHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhc------cHHHHHHHHHHHHHHH
Confidence 467999866699999998 7888888765333345677899999999988865431 3445667778888888
Q ss_pred HHhcCCccc--CCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec--CC
Q 018172 262 IRQSGVFGL--PEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLRAERIMARGGRRFGADAKYARVSML--SR 333 (360)
Q Consensus 262 l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~--~~ 333 (360)
|++++.-.+ ..+.|.++ .++++.+. ...+.+.|.++||.+.|+. ++.+||+.. .+
T Consensus 323 L~~l~~~~~~~~~g~g~~~------------~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~~-----~~~lRi~p~l~~t 385 (401)
T TIGR01885 323 LKKLPKPIITEVRGRGLLN------------AIVIDESKTGRTAWDLCLKLKEKGLLAKPTH-----GNIIRLAPPLVIT 385 (401)
T ss_pred HHhccCCceeEEeecCeeE------------EEEeccCcchhHHHHHHHHHHhCCEEEEecC-----CCEEEEeCCccCC
Confidence 888742111 11222221 12233321 2566777788999998742 568999974 49
Q ss_pred hHHHHHHHHHHHHHHh
Q 018172 334 EEIFNIFLERLSAIQG 349 (360)
Q Consensus 334 ~e~~~~~~~~l~~~~~ 349 (360)
++++++++++|+++++
T Consensus 386 ~~~i~~~l~~l~~~l~ 401 (401)
T TIGR01885 386 EEQLDEGLEIIKKVID 401 (401)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999998763
No 260
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.73 E-value=1.2e-16 Score=132.51 Aligned_cols=151 Identities=19% Similarity=0.184 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH-HHHHHhCCeeeeecCC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP-AETDYLRSGLYKWDGD 117 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~-~~~~~~g~~~~~~~~~ 117 (360)
.++++.++++++. .++++++++|+|+++..++..+.+++++ |+++.++|.+.. ..+...|++++.++.+
T Consensus 3 ~~~~~~l~~~~~~------~~~~~~~~~~~t~a~~~~~~~~~~~~~~----v~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 72 (170)
T cd01494 3 EELEEKLARLLQP------GNDKAVFVPSGTGANEAALLALLGPGDE----VIVDANGHGSRYWVAAELAGAKPVPVPVD 72 (170)
T ss_pred HHHHHHHHHHcCC------CCCcEEEeCCcHHHHHHHHHHhCCCCCE----EEEeecccceehhhHHHhcCCEEEEeccC
Confidence 7899999999952 3458999999999999999999888887 999999999998 8888899999988765
Q ss_pred cccc-----------ccCCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCc---CCCCCCccEEE
Q 018172 118 ANTF-----------DKNNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTP---ITGAADHDIML 182 (360)
Q Consensus 118 ~~~~-----------~~~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~---~~~~~~~~i~~ 182 (360)
.+.. ..+++++++++++++||+|...+ +.+.++|+++++++|+|++|..+.... .....+.++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~ 152 (170)
T cd01494 73 DAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVT 152 (170)
T ss_pred CCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEE
Confidence 4321 11468899999999999999887 778888888999999999999654432 23345678999
Q ss_pred eccccccCCCCceEEEEee
Q 018172 183 FTLSKCTGHAGSRIGWALV 201 (360)
Q Consensus 183 ~S~sK~~~~~G~r~G~~~~ 201 (360)
.|++|.++. .++|+++.
T Consensus 153 ~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 153 FSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred EEcccccCC--CceEEEEe
Confidence 999999985 56999876
No 261
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.73 E-value=1.6e-15 Score=144.18 Aligned_cols=264 Identities=13% Similarity=0.025 Sum_probs=170.9
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHHHh-CCe--e-----------eeecCCc------
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETDYL-RSG--L-----------YKWDGDA------ 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~~~-g~~--~-----------~~~~~~~------ 118 (360)
+.+++++++++++..+++.... .|.. +|+.-+.+|......+..+ +.. . ..++.+.
T Consensus 102 ~~~~f~~sGseA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 178 (421)
T PRK06777 102 AKTAFFTTGAEAVENAVKIARAYTGRP---GVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVS 178 (421)
T ss_pred ceEEEeCCcHHHHHHHHHHHHHhhCCC---eEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcC
Confidence 4789999999999998887642 2322 4887777777775444332 210 0 1111110
Q ss_pred -----ccccc-------CCCeeEEEEcCCCCCCccc-ch----HHHHHHhhhcCcEEEEeecccCCCCCc-C--CCCCCc
Q 018172 119 -----NTFDK-------NNGAYIEVVNSPNNPDGTI-RE----AVLAKVNRSAEGKLIHDLAYYWPQYTP-I--TGAADH 178 (360)
Q Consensus 119 -----~~~~~-------~~~~~~i~~~~p~NPtG~~-~~----~~~~~~~~~~~~~li~D~ay~~~~~~~-~--~~~~~~ 178 (360)
+.++. .++..+|++....++.|.. ++ +.+.++|+++|+++|.||+|.+..... . ....+.
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~ 258 (421)
T PRK06777 179 VEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDV 258 (421)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCC
Confidence 00110 1345566666556778865 44 466789999999999999998532111 1 111121
Q ss_pred cEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 179 DIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 179 ~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
.--+.++||.++ +|+|+||+++ ++++++.+.......+++.|+++|.++.++|+.+.+ ++..++++++.+++
T Consensus 259 ~pDiv~~sK~l~-~G~pigav~~-~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~------~~l~~~~~~~g~~l 330 (421)
T PRK06777 259 KPDLITMAKSLG-GGMPISAVVG-RAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE------EKLCQRALILGAHL 330 (421)
T ss_pred CCCEEeeehhhc-CCCceEEEEE-cHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh------ccHHHHHHHHHHHH
Confidence 111347999999 9999999999 789988887555557788999999999999986543 24555566666666
Q ss_pred HHHHHhc----CCcccCCCCCcccccccccCCCCCCcccccCC-----ch---HHHHHHHHhhCeeeeCCCCCCCCCCeE
Q 018172 259 RQVIRQS----GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-----ED---EDCEKLLRAERIMARGGRRFGADAKYA 326 (360)
Q Consensus 259 ~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~ 326 (360)
.+.|+++ +.+....+.|.++.+ .+..+ +. ..+...+.++||.+.|+..|+ +++
T Consensus 331 ~~~L~~l~~~~~~i~~vrg~G~~~~i------------~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g---~~l 395 (421)
T PRK06777 331 VEVLEKAKASCPAIVDIRARGSMVAV------------EFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHG---NVI 395 (421)
T ss_pred HHHHHHHHHhCCCeEEecCceEEEEE------------EEecCccCCccHHHHHHHHHHHHhCCeEEeecCCCC---CEE
Confidence 6666554 433334455555332 11111 11 344555678999999987665 499
Q ss_pred EEEe--cCChHHHHHHHHHHHHHHh
Q 018172 327 RVSM--LSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 327 R~s~--~~~~e~~~~~~~~l~~~~~ 349 (360)
||+. ..++|++++++++|.+++.
T Consensus 396 r~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 396 RFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 9987 4599999999999999874
No 262
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.73 E-value=1.5e-15 Score=144.79 Aligned_cols=265 Identities=12% Similarity=0.063 Sum_probs=167.8
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcH-HHHHHhCCe------------eeeecCCc-------
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYP-AETDYLRSG------------LYKWDGDA------- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~-~~~~~~g~~------------~~~~~~~~------- 118 (360)
+.+++++++++++..+++.... .|.. +|+.-...|.... ......|.. +..++.+.
T Consensus 102 ~~v~f~~sGsEAve~AlklAr~~tgr~---~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (443)
T PRK08360 102 PKVSFGLSGSDANDGAIKFARAYTKRR---KILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFG 178 (443)
T ss_pred CEEEEcCCHHHHHHHHHHHHHHhcCCC---eEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCcccccccc
Confidence 4799999999999999887642 2322 3777666666654 222222211 11111100
Q ss_pred --------c-------ccc---cCCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCc----
Q 018172 119 --------N-------TFD---KNNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTP---- 171 (360)
Q Consensus 119 --------~-------~~~---~~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~---- 171 (360)
+ .+. ..+++.+|++.--+||+|.+++ +.+.++|+++|+++|+||+|.+.....
T Consensus 179 ~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a 258 (443)
T PRK08360 179 KEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFA 258 (443)
T ss_pred CchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchh
Confidence 0 011 0246777777755699999876 356788999999999999998421111
Q ss_pred --CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHH
Q 018172 172 --ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRR 249 (360)
Q Consensus 172 --~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 249 (360)
..+. ..++ .++||.++ +|+|+||+++ ++++++.+.......+.+.+++.+.++.++++.+.+. ...++.++
T Consensus 259 ~~~~~~-~pDi--itlsK~l~-~G~pigav~~-~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~--~l~~~~~~ 331 (443)
T PRK08360 259 IEHFGV-EPDI--ITLGKPLG-GGLPISATIG-RAEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEK--NLLKRAEK 331 (443)
T ss_pred hhhcCC-CCCE--EEeccccc-CCceeEEEEE-cHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHc--CHHHHHHH
Confidence 1111 1233 37799999 9999999998 8899998875545567788999999999999876543 44444444
Q ss_pred HHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC--------ch---HHHHHHHHhhCeeeeCCCC
Q 018172 250 LMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--------ED---EDCEKLLRAERIMARGGRR 318 (360)
Q Consensus 250 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~l~~~gI~~~pg~~ 318 (360)
.-...++.+.+...+++.+.-.. +.+.++.+.+. +. ..+...+.++||.+.+..
T Consensus 332 ~g~~l~~~L~~l~~~~~~v~~vr--------------g~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~- 396 (443)
T PRK08360 332 LGNYTKKRLEEMKKKHELIGDVR--------------GIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFS- 396 (443)
T ss_pred HHHHHHHHHHHHHHhCCCeeeee--------------ccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeecC-
Confidence 44444444444333443222121 22223333221 11 456677889999986521
Q ss_pred CCCCCCeEEEE--ecCChHHHHHHHHHHHHHHhchhc
Q 018172 319 FGADAKYARVS--MLSREEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 319 f~~~~~~~R~s--~~~~~e~~~~~~~~l~~~~~~~~~ 353 (360)
.+.+||+ +..++++++++++++.+++.+...
T Consensus 397 ----~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 397 ----GNVLRIQPPLTIEKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred ----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3679995 445999999999999999987543
No 263
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.73 E-value=1.9e-15 Score=153.69 Aligned_cols=291 Identities=12% Similarity=0.018 Sum_probs=205.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChH----HHHHHHHHhhcCC-CCCCCceEEEeCCCCCCcHHHHHHhCCeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGST----QLYQAALYALSSP-GGPEPISVVSAAPYYSQYPAETDYLRSGLYK 113 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t----~~l~~~~~~l~~~-gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~ 113 (360)
.++|+.+++++|. ++|.++++++ +++.+++..+.++ ||..+..|+++...|......+...|++++.
T Consensus 571 ~~~r~~la~i~g~--------~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~ 642 (993)
T PLN02414 571 EDLGDLLCEITGF--------DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVV 642 (993)
T ss_pred HHHHHHHHHHhCC--------CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEE
Confidence 6889999999984 5899999999 8999999999866 8733344999999999999999999999999
Q ss_pred ecCCcccc-cc-------C---CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC-CCcCCCCCCccE
Q 018172 114 WDGDANTF-DK-------N---NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ-YTPITGAADHDI 180 (360)
Q Consensus 114 ~~~~~~~~-~~-------~---~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~-~~~~~~~~~~~i 180 (360)
++.|.++. +. + +++++|++++|||-+|...+ +++.++++++|+++++|.++.... ....+...+.++
T Consensus 643 v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~ 722 (993)
T PLN02414 643 VGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADV 722 (993)
T ss_pred eccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCE
Confidence 99865432 11 2 47899999999999999886 777788888999999999987544 334457888999
Q ss_pred EEeccccccCC----CCceEEEEeecCHHHHHHHHHH------------Hhhcccc------CChHHHHHHHHHhcccCC
Q 018172 181 MLFTLSKCTGH----AGSRIGWALVKDTEVARKMTRF------------IELGSIG------VSKESQLRAAKILGIVSD 238 (360)
Q Consensus 181 ~~~S~sK~~~~----~G~r~G~~~~~~~~~~~~l~~~------------~~~~~~~------~~~~~~~~~~~~l~~~~~ 238 (360)
+++|.+|.|+. .|=.+|++.+ .+.+...+-.. ...+..+ .+......+...+..+ +
T Consensus 723 ~~~s~HK~f~~P~G~GGPg~G~l~~-~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~l-G 800 (993)
T PLN02414 723 CHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMM-G 800 (993)
T ss_pred EEecCCccCCcCcccCCCCeeeEEE-chhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHH-C
Confidence 99999997652 2234888887 66666655311 1000011 1113333444444433 3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCc-ccccccccCCCCCCcccccCC-----chHHHHHHHHhhCee
Q 018172 239 DYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLE-YCNFTGKFTNSHPGFAWLESK-----EDEDCEKLLRAERIM 312 (360)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gI~ 312 (360)
. +.+.+..+....+..++.+.|.+.-.+.+..+.+. +..|. .-+..++ +..++.+.|.++||.
T Consensus 801 ~--~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv---------~~~~~l~~~~g~~~~di~krL~d~Gih 869 (993)
T PLN02414 801 S--EGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFI---------IDLRPFKNTAGIEPEDVAKRLMDYGFH 869 (993)
T ss_pred H--hHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEE---------EeccccccccCCCHHHHHHHHHHcCcE
Confidence 2 67778888889999999999977544444333321 11111 0011222 126677777799997
Q ss_pred eeCCCCCCCCCCeEEEEecC--ChHHHHHHHHHHHHHHhchh
Q 018172 313 ARGGRRFGADAKYARVSMLS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 313 ~~pg~~f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
..- ..|. ..+++|++.+- +++|+|++++++..+..+..
T Consensus 870 apt-~~~p-v~~~lmiepTE~~skeelDrf~~al~~i~~e~~ 909 (993)
T PLN02414 870 APT-MSWP-VPGTLMIEPTESESKAELDRFCDALISIREEIA 909 (993)
T ss_pred Eee-eccc-cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 543 3353 47799999855 89999999999999887654
No 264
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.72 E-value=4.5e-15 Score=140.08 Aligned_cols=265 Identities=12% Similarity=0.027 Sum_probs=170.9
Q ss_pred cEEEcCChHHHHHHHHHhhcCC-------------------------------CCCCCceEEEeCCCCCCcHHH-----H
Q 018172 61 HIVIGTGSTQLYQAALYALSSP-------------------------------GGPEPISVVSAAPYYSQYPAE-----T 104 (360)
Q Consensus 61 ~i~~t~G~t~~l~~~~~~l~~~-------------------------------gd~~~~~vl~~~p~~~~~~~~-----~ 104 (360)
+|=.-+ +++++..++.+|++| ||+ |+..++........ +
T Consensus 114 nvqp~S-g~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~----i~~l~l~~GGHlthg~~~n~ 188 (493)
T PRK13580 114 YVQPHS-GADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQR----LLGMSLDSGGHLTHGFRPNI 188 (493)
T ss_pred cccCCC-cHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCE----EEeecCCCCCeeecCcccch
Confidence 344444 578888899999876 676 88776665444221 1
Q ss_pred HHhCCeeeeecCCccc--ccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCC-
Q 018172 105 DYLRSGLYKWDGDANT--FDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPIT- 173 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~~--~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~- 173 (360)
.....+++..+++.+. ++. .++++.|+++..+|-.+ ..+ +.+.++|+++|+++++|++|..+.+....
T Consensus 189 ~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~-~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~ 267 (493)
T PRK13580 189 SGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPR-RVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVF 267 (493)
T ss_pred hhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCC-CcCHHHHHHHHHHcCCEEEEECchhhceeccccc
Confidence 1112444555554321 221 35778888888888755 445 78889999999999999999965432111
Q ss_pred -----CCCCccEEEecccccc-CCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHH
Q 018172 174 -----GAADHDIMLFTLSKCT-GHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYG 247 (360)
Q Consensus 174 -----~~~~~~i~~~S~sK~~-~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (360)
...+.+++++|++|++ |+. .|++++ ++++++.+.+...+...+..++...+++.++..+.. ....+.
T Consensus 268 ~~~~~~~~~~D~vtgT~hKaL~GP~---GG~I~~-~~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~---~ef~~y 340 (493)
T PRK13580 268 TGDEDPVPHADIVTTTTHKTLRGPR---GGLVLA-KKEYADAVDKGCPLVLGGPLPHVMAAKAVALAEART---PEFQKY 340 (493)
T ss_pred hhhcCCCCCCcEEEeCChhhccCCC---eEEEEe-cHHHHHHHhhCCCcccCCCccHHHHHHHHHHHHHhC---ccHHHH
Confidence 1235789999999988 533 499988 788888885444322233333333333334443322 223567
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch----HHHHHHHHhhCeeeeCCCCCCC--
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED----EDCEKLLRAERIMARGGRRFGA-- 321 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~gI~~~pg~~f~~-- 321 (360)
++++.++.+.+.+.|.+.+. .+... + ...-.+++.+.+. ..+.+.|.+.||.+.+-.....
T Consensus 341 ~~~l~~Na~~La~~L~~~G~-~vv~g-g-----------TdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~ 407 (493)
T PRK13580 341 AQQVVDNARALAEGFLKRGA-RLVTG-G-----------TDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPN 407 (493)
T ss_pred HHHHHHHHHHHHHHHHhcCC-CccCC-C-----------CCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCC
Confidence 88999999999999998853 33211 0 1112567777653 4677799999999875332221
Q ss_pred ---CCCeEEEEecC------ChHHHHHHHHHHHHHHhch
Q 018172 322 ---DAKYARVSMLS------REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 322 ---~~~~~R~s~~~------~~e~~~~~~~~l~~~~~~~ 351 (360)
.+..+||++.. ++++++++++.|.+++...
T Consensus 408 g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 408 GAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred CCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 15579999754 5899999999999998753
No 265
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.71 E-value=6.4e-15 Score=133.96 Aligned_cols=216 Identities=17% Similarity=0.122 Sum_probs=161.6
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHH----hCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDY----LRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~----~g~~~~~ 113 (360)
...|++.++...+. + ++++.+++..++..++..|+..|++ ++.....|.....+++. +|++...
T Consensus 79 ~~~le~~iaal~ga-------~-~~l~fsSGmaA~~~al~~L~~~g~~----iV~~~~~Y~gT~~~l~~~~~~~gie~~~ 146 (409)
T KOG0053|consen 79 RDVLESGIAALEGA-------A-HALLFSSGMAAITVALLHLLPAGDH----IVATGDVYGGTLRILRKFLPKFGGEGDF 146 (409)
T ss_pred hHHHHHHHHHHhCC-------c-eEEEecccHHHHHHHHHHhcCCCCc----EEEeCCCcccHHHHHHHHHHHhCceeee
Confidence 37888888888884 3 5777777788889999999999999 99999999999888665 4778777
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++++ .+.+.. ++++++|++.+|.||+..+.+ +.+.++|+++|+++|+|+.++.+ +...+-..+.+|++.|.+|.+
T Consensus 147 vd~~~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p-~~~~pL~lGADIV~hSaTKyi 225 (409)
T KOG0053|consen 147 VDVDDLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSP-YNQDPLPLGADIVVHSATKYI 225 (409)
T ss_pred echhhHHHHHHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcc-cccChhhcCCCEEEEeeeeee
Confidence 7654 334433 568999999999999999999 78889999999999999998854 333334677899999999988
Q ss_pred C-CCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 190 G-HAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 190 ~-~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+ ...+=.|.++...+++.+.+...+...+.+.++........-++.+ .-..++-.++...+.+.|.+.+.+
T Consensus 226 ~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglktl--------~lRi~~~~ena~~~A~~Le~~~~v 297 (409)
T KOG0053|consen 226 GGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLKTL--------HLRINKHSENALKIALLLEAHPKV 297 (409)
T ss_pred cCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcchh--------hhhHHHHHHHHHHHHHHhhhCCce
Confidence 5 3445556676645999999999998888889888887776655421 112222233334455666666655
Q ss_pred ccCCCC
Q 018172 269 GLPEYP 274 (360)
Q Consensus 269 ~~~~~~ 274 (360)
....++
T Consensus 298 ~kv~YP 303 (409)
T KOG0053|consen 298 KKVYYP 303 (409)
T ss_pred eEEEcC
Confidence 543333
No 266
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.71 E-value=7.7e-16 Score=146.66 Aligned_cols=277 Identities=12% Similarity=0.042 Sum_probs=174.3
Q ss_pred CcEEEcCChHHHHHHHHHhhcCC--CCCCCceEEEeCCCCCCcHHHHHHh-C------------Ce-------eeeec-C
Q 018172 60 RHIVIGTGSTQLYQAALYALSSP--GGPEPISVVSAAPYYSQYPAETDYL-R------------SG-------LYKWD-G 116 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~~--gd~~~~~vl~~~p~~~~~~~~~~~~-g------------~~-------~~~~~-~ 116 (360)
+.+++++|+++++..+++..... ++. |+..+++|..+...+... | .. ...++ .
T Consensus 107 ~~v~~~~sGseA~e~Aik~a~~~~g~~~----ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (426)
T PRK00062 107 EMVRMVNSGTEATMSAIRLARGYTGRDK----IIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYN 182 (426)
T ss_pred CEEEEecCHHHHHHHHHHHHHHHhCCCe----EEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCC
Confidence 47999999999999999886432 333 999999999986433221 1 00 01111 1
Q ss_pred Ccccccc-----CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCcC--CCCCCccEEEec
Q 018172 117 DANTFDK-----NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTPI--TGAADHDIMLFT 184 (360)
Q Consensus 117 ~~~~~~~-----~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~~--~~~~~~~i~~~S 184 (360)
|.+.++. ..++.+|++......+|.+.+ +.+.++|+++|+++|+||+|.+...... ....+..--+.+
T Consensus 183 d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pDi~~ 262 (426)
T PRK00062 183 DLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPDLTT 262 (426)
T ss_pred CHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcchHh
Confidence 1222211 235667777633344888865 4677899999999999999984321111 111111111468
Q ss_pred cccccCCCCceEEEEeecCHHHHHHHHHH---HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHH
Q 018172 185 LSKCTGHAGSRIGWALVKDTEVARKMTRF---IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQV 261 (360)
Q Consensus 185 ~sK~~~~~G~r~G~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 261 (360)
++|.++ .|+++|++++ ++++++.+... ....+++.+++.+.++.+.|+.+.+. +..++.++.....++.+.+.
T Consensus 263 ~gK~l~-~G~p~ga~~~-~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~--~~~~~~~~~~~~~~~~l~~~ 338 (426)
T PRK00062 263 LGKIIG-GGLPVGAFGG-RREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEP--GFYEELEALTKRLAEGLKEA 338 (426)
T ss_pred hhhHhh-CCCcceeeeE-HHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHH
Confidence 999999 8999999988 78998888532 23345688999999999999877654 56777777777777777766
Q ss_pred HHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHH
Q 018172 262 IRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFN 338 (360)
Q Consensus 262 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~ 338 (360)
.++++.+.-....|.++.+.-.. .....+.-...++. ..+...|.++||.+.|.. .+.+++++..++++++
T Consensus 339 ~~~~~~~~~vrg~G~~~~i~l~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~-----~~~~~~~~~~t~~ei~ 412 (426)
T PRK00062 339 AKKAGIPLTVNRVGSMFGLFFTD-EPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQ-----FEAGFVSAAHTDEDIE 412 (426)
T ss_pred HHHcCCceEEEEecceEEEEEec-CCCcchhhhccccHHHHHHHHHHHHHCCeEeecCC-----cCceeeeccCCHHHHH
Confidence 66665332223344443221000 00000000001121 467777888999998732 2356788767999999
Q ss_pred HHHHHHHHHHhc
Q 018172 339 IFLERLSAIQGG 350 (360)
Q Consensus 339 ~~~~~l~~~~~~ 350 (360)
++++++.+++.+
T Consensus 413 ~~~~~l~~~l~~ 424 (426)
T PRK00062 413 KTLEAARKAFAA 424 (426)
T ss_pred HHHHHHHHHHHh
Confidence 999999998864
No 267
>PRK02769 histidine decarboxylase; Provisional
Probab=99.71 E-value=5.6e-15 Score=137.83 Aligned_cols=269 Identities=11% Similarity=0.031 Sum_probs=183.2
Q ss_pred HHHHHHHHHHhhcCCCCCCCCc--EEEcCChHHHHHHHHHhh--cCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeec
Q 018172 40 ELAEAINNLHHVVDNAVSDGRH--IVIGTGSTQLYQAALYAL--SSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWD 115 (360)
Q Consensus 40 ~lr~~la~~~~~~~~~~~~~~~--i~~t~G~t~~l~~~~~~l--~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~ 115 (360)
+.++.++++++. ++++ .++|+|+|+++...+... ..++++ |++++-.|.+...+++.+|.+...++
T Consensus 69 ~~~~~~a~l~g~------~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~----ii~s~~~H~Sv~ka~~~lg~~~~~V~ 138 (380)
T PRK02769 69 DVMNFFAELFKI------PFNESWGYITNGGTEGNLYGCYLARELFPDGT----LYYSKDTHYSVSKIARLLRIKSRVIT 138 (380)
T ss_pred HHHHHHHHHhCC------CCCCCCEEEecChHHHHHHHHHHHHHhCCCcE----EEeCCCceehHHHHHHHcCCCCceec
Confidence 555556666765 3234 488999999976655443 245666 99999999999999999999888887
Q ss_pred CCccc-ccc-------CC---CeeEEEEcCCCCCCcccch-HHHHHHhhhcC---cEEEEeecccCCCCC------cCCC
Q 018172 116 GDANT-FDK-------NN---GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAE---GKLIHDLAYYWPQYT------PITG 174 (360)
Q Consensus 116 ~~~~~-~~~-------~~---~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~---~~li~D~ay~~~~~~------~~~~ 174 (360)
.+.++ ++. ++ +|.+|+++..+|+||.+.| +++.++|+++| +++++|.+|+.+..+ ++..
T Consensus 139 ~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~ 218 (380)
T PRK02769 139 SLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSF 218 (380)
T ss_pred cCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCc
Confidence 65433 221 22 4889999999999999998 77888888887 699999999864433 2222
Q ss_pred CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHh-------hccccCChHHHHHHHHHhcccCCCchhHHHHH
Q 018172 175 AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIE-------LGSIGVSKESQLRAAKILGIVSDDYPNFFEYG 247 (360)
Q Consensus 175 ~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (360)
..+.+.+..|.+|.++ ....+|.++. .++..+.+..... ....+.+.....++.++++.+.. ..+++.
T Consensus 219 ~~~vDsis~s~HK~~~-~P~g~G~l~~-r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~---~G~~~~ 293 (380)
T PRK02769 219 ADGIDSIAISGHKFIG-SPMPCGIVLA-KKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGS---KGLRQR 293 (380)
T ss_pred cCCCCEEEECCcccCC-CCCCcEEEEE-ehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCH---HHHHHH
Confidence 2367889999999877 3345888888 4555554421111 11223455666677777775532 678888
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEE
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYAR 327 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R 327 (360)
.+...+..+++.+.|++.+...+..|. .+.+.++.++. .+ . +|-.+.+ .++++|
T Consensus 294 ~~~~~~la~~l~~~L~~~g~~~~~~p~--------------~~~v~f~~~~~-~~---~--~~w~l~~------~~~~~h 347 (380)
T PRK02769 294 VQHCLDMAQYAVDRLQANGIPAWRNPN--------------SITVVFPCPSE-RI---W--KKWHLAT------SGNQAH 347 (380)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEcCCC--------------ceEEEEcCCCH-HH---H--hCeeEcc------cCCEEE
Confidence 899999999999999887433333333 22344444442 21 1 3433332 245899
Q ss_pred EEecC--ChHHHHHHHHHHHHHHh
Q 018172 328 VSMLS--REEIFNIFLERLSAIQG 349 (360)
Q Consensus 328 ~s~~~--~~e~~~~~~~~l~~~~~ 349 (360)
+.+.. +.|.++++++.|.+...
T Consensus 348 i~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 348 IITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHh
Confidence 98866 88899999999988776
No 268
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.70 E-value=1.6e-14 Score=132.09 Aligned_cols=288 Identities=15% Similarity=0.089 Sum_probs=210.5
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc--HHHHHHhCCeeeeec
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY--PAETDYLRSGLYKWD 115 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~--~~~~~~~g~~~~~~~ 115 (360)
..++.+.+...++.. ..+-+++++++|.++...+..+++|||+ |++........ ..+++.+|++++.+.
T Consensus 40 ~~~~~~~L~~v~~t~-----~~~~~ll~gsGt~amEAav~sl~~pgdk----VLv~~nG~FG~R~~~ia~~~g~~v~~~~ 110 (383)
T COG0075 40 MKEVLEKLRKVFGTE-----NGDVVLLSGSGTLAMEAAVASLVEPGDK----VLVVVNGKFGERFAEIAERYGAEVVVLE 110 (383)
T ss_pred HHHHHHHHHHHhcCC-----CCcEEEEcCCcHHHHHHHHHhccCCCCe----EEEEeCChHHHHHHHHHHHhCCceEEEe
Confidence 366666666666641 1256778899999999999999999998 88777665544 588999999998776
Q ss_pred CCc------c----ccccCCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEec
Q 018172 116 GDA------N----TFDKNNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFT 184 (360)
Q Consensus 116 ~~~------~----~~~~~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S 184 (360)
.+. + .++.+++.++|.+.+---+||+..+ +++.++++++|.++|+|.+-+.+..+...+.++-++++.+
T Consensus 111 ~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itg 190 (383)
T COG0075 111 VEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITG 190 (383)
T ss_pred CCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEec
Confidence 442 2 2333577888888877668999988 7888888999999999999887777777789999999999
Q ss_pred cccccCC-CCceEEEEeecCHHHHHHHHHHH------------------hhccccCChHHHHHHHHHhcccCCCchhHHH
Q 018172 185 LSKCTGH-AGSRIGWALVKDTEVARKMTRFI------------------ELGSIGVSKESQLRAAKILGIVSDDYPNFFE 245 (360)
Q Consensus 185 ~sK~~~~-~G~r~G~~~~~~~~~~~~l~~~~------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 245 (360)
..|.++. || +|++.. +++..+.+.... ..+.++++....+++.++|+.+.. +-++
T Consensus 191 SQK~l~~PPG--la~v~~-S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~---EGle 264 (383)
T COG0075 191 SQKALGAPPG--LAFVAV-SERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILE---EGLE 264 (383)
T ss_pred CchhccCCCc--cceeEE-CHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHH---hhHH
Confidence 9999974 66 777777 666655553221 234456777777788888887654 5699
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch----HHHHHHHHhhCeeeeCCCCCCC
Q 018172 246 YGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED----EDCEKLLRAERIMARGGRRFGA 321 (360)
Q Consensus 246 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~gI~~~pg~~f~~ 321 (360)
...++.+++.+.+++.+..++.-.+. .....+. . ...+..|.+ +....+++++|+.+.+|..--
T Consensus 265 ~r~~RH~~~~~a~r~~~~alGl~~~~--~~~~~s~------t---vta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~~l- 332 (383)
T COG0075 265 ARIARHRRLAEALRAGLEALGLELFA--DPERRSP------T---VTAIKVPEGVDDKKVRRALLKEYGVEIAGGQGPL- 332 (383)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcccc--CcccCCC------c---eEEEECCCCCCcHHHHHHHHHhCCEEeccccccc-
Confidence 99999999999999999999644443 2111110 1 122333332 344467777799988875332
Q ss_pred CCCeEEEEe-cC-ChHHHHHHHHHHHHHHhchh
Q 018172 322 DAKYARVSM-LS-REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 322 ~~~~~R~s~-~~-~~e~~~~~~~~l~~~~~~~~ 352 (360)
....+||+- +. +.+++..++.+|..++.+..
T Consensus 333 ~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 333 KGKIFRIGHMGNVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred CccEEEEecCccCCHHHHHHHHHHHHHHHHHcC
Confidence 356999974 33 89999999999999998754
No 269
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.70 E-value=6.8e-15 Score=138.61 Aligned_cols=283 Identities=12% Similarity=0.071 Sum_probs=183.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChH-HHHHHHHHhhcC---CCCCCCceEEEeCCCCCCcHHHHHHhCCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGST-QLYQAALYALSS---PGGPEPISVVSAAPYYSQYPAETDYLRSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t-~~l~~~~~~l~~---~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~ 114 (360)
.++++.+++++|.+ +....++++|+| .++.+++.++-. +|+. |+++.-+|.+...++...|++++.+
T Consensus 108 ~~~e~~~~~~~G~~-----~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~----VI~p~~th~S~~kAi~~~G~~pv~V 178 (444)
T TIGR03531 108 NKLVKDFLKLLGLR-----SIKSAFVVPLATGMSLSLCLSALRHKRPKAKY----VIWPRIDQKSCIKAISTAGFEPRVI 178 (444)
T ss_pred HHHHHHHHHHcCCC-----CCCEEEEECCHHHHHHHHHHHHcCCcCCCCCE----EEEECcChHHHHHHHHHcCCeEEEe
Confidence 55666666677751 123578888888 577777777652 4676 9999999999999999999999988
Q ss_pred cC--Ccccccc---------CC---CeeEEEEcCCC-CCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC--cC--CC
Q 018172 115 DG--DANTFDK---------NN---GAYIEVVNSPN-NPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT--PI--TG 174 (360)
Q Consensus 115 ~~--~~~~~~~---------~~---~~~~i~~~~p~-NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~--~~--~~ 174 (360)
+. +.+.+.. ++ +++++++++|+ +++|..-+ +.+.++|+++|+++|+|+||+..... .. .+
T Consensus 179 d~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g 258 (444)
T TIGR03531 179 ETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKA 258 (444)
T ss_pred eeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhcc
Confidence 83 4444433 12 56777777775 34455544 67888999999999999999853211 11 11
Q ss_pred -CCC-ccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHH
Q 018172 175 -AAD-HDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMS 252 (360)
Q Consensus 175 -~~~-~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 252 (360)
..+ .+++++|++|.+.+||+ .|.++++++++++.+..... ....+.+.|.+...++.. .. +.++++.++..
T Consensus 259 ~~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~--g~~~~s~~~~~~~~ll~~--G~--~g~~~li~~~~ 331 (444)
T TIGR03531 259 IKVGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYP--GRASASPSLDVLITLLSL--GS--KGYLELLKERK 331 (444)
T ss_pred ccccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHhcc--CCCCChHHHHHHHHHHHh--CH--HHHHHHHHHHH
Confidence 122 37889999999998776 34454668899988876532 233455777777776652 32 78888899999
Q ss_pred HHHHHHHHHHHhcC---CcccCCCCCcccccccccCCCCCCccccc---CCchHHHHHHHHhhCee----eeCCC-----
Q 018172 253 ERWNMLRQVIRQSG---VFGLPEYPLEYCNFTGKFTNSHPGFAWLE---SKEDEDCEKLLRAERIM----ARGGR----- 317 (360)
Q Consensus 253 ~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gI~----~~pg~----- 317 (360)
++++++.+.|+++. +..+...+.-..++ =+.++ -++...+-..|-.++|. +.||.
T Consensus 332 ~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~----------~~~~~~~~~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~ 401 (444)
T TIGR03531 332 EMYKYLKELLQKLAERHGERLLDTPENPISS----------AMTLSTLKGKDPTMLGSMLYSRRVTGPRVVTNGDSKTVG 401 (444)
T ss_pred HHHHHHHHHHHHHHHhhCcEeecCCCCceeE----------EEecccccccCHHHHHHHHHhCCCCCceeecCCCceEEC
Confidence 99999999888762 22222111100000 01111 11225666666666662 44555
Q ss_pred --CC---CC-----CCCeEEEE--ecCChHHHHHHHHHHHHH
Q 018172 318 --RF---GA-----DAKYARVS--MLSREEIFNIFLERLSAI 347 (360)
Q Consensus 318 --~f---~~-----~~~~~R~s--~~~~~e~~~~~~~~l~~~ 347 (360)
.| |. ...|+-+. ++.+.+|++.++++|.+.
T Consensus 402 ~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 402 GCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred CEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 33 21 12255553 334899999999999875
No 270
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.70 E-value=4.7e-15 Score=140.22 Aligned_cols=287 Identities=13% Similarity=0.076 Sum_probs=187.3
Q ss_pred HHHHHHHHHHHhhcCCCCCC-C-CcEE--EcCChHHHHHHHHHhhcC--------CCC-CCCceEEEeCCCCCCcHHHHH
Q 018172 39 PELAEAINNLHHVVDNAVSD-G-RHIV--IGTGSTQLYQAALYALSS--------PGG-PEPISVVSAAPYYSQYPAETD 105 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~-~-~~i~--~t~G~t~~l~~~~~~l~~--------~gd-~~~~~vl~~~p~~~~~~~~~~ 105 (360)
++.++.++++++. + + +++. +|+|+|+++++++..... .|. ..+.+|++++-.|.++...++
T Consensus 83 ~~~~~~la~llg~------~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~ 156 (431)
T TIGR01788 83 NRCVNMLADLWHA------PAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFAR 156 (431)
T ss_pred HHHHHHHHHHhCC------CCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHH
Confidence 4455556666664 3 1 2454 489999999988765531 110 011359999999999999999
Q ss_pred HhCCeeeeecCCccc--ccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhc------CcEEEEeecccCCC-
Q 018172 106 YLRSGLYKWDGDANT--FDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSA------EGKLIHDLAYYWPQ- 168 (360)
Q Consensus 106 ~~g~~~~~~~~~~~~--~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~------~~~li~D~ay~~~~- 168 (360)
.+|++++.++.|.++ ++. ++++.+|+++..||.||.+.| +++.++|+++ ++++++|.+|+.+.
T Consensus 157 ~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~ 236 (431)
T TIGR01788 157 YFDVELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIA 236 (431)
T ss_pred HcCceeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHH
Confidence 999999999988643 222 467899999999999999999 7888888888 89999999999422
Q ss_pred ------CCcCCCCCCccEEEecccccc-CCCCceEEEEeecCHH-HHHHHHHHHhhc-------cccCChHH--HHHHHH
Q 018172 169 ------YTPITGAADHDIMLFTLSKCT-GHAGSRIGWALVKDTE-VARKMTRFIELG-------SIGVSKES--QLRAAK 231 (360)
Q Consensus 169 ------~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~~~~~~~~-~~~~l~~~~~~~-------~~~~~~~~--~~~~~~ 231 (360)
..........+.+..|.+|.+ ++.| +|+++.++.+ +.+.+.....+. +...+... ......
T Consensus 237 p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g--~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~ 314 (431)
T TIGR01788 237 PFVYPDLEWDFRLPRVKSINVSGHKYGLVYPG--VGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYY 314 (431)
T ss_pred HHhCCCchhhcCCCCceEEEECchhccCCCCC--cEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHH
Confidence 222223445567899999965 6565 8888775553 223321110000 11112221 112222
Q ss_pred HhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCC--CCcccccccccCCCCCCcccccCCc-------hHHH
Q 018172 232 ILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEY--PLEYCNFTGKFTNSHPGFAWLESKE-------DEDC 302 (360)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 302 (360)
.+..+ + ..-+++..++..++.+++.+.|++.+++++..+ ..+ .+.++.++ ..++
T Consensus 315 ~l~~l-G--~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~--------------iV~Fr~~~~~~~~~~~~~l 377 (431)
T TIGR01788 315 NFLRL-G--REGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIP--------------LVAFKLKDDADPGYTLYDL 377 (431)
T ss_pred HHHHh-c--HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCce--------------EEEEEeCCCCCCCcCHHHH
Confidence 33322 1 267788888899999999999999987777654 222 23333321 2678
Q ss_pred HHHHHhhCeeeeCCCCC-CC-CCCeEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 303 EKLLRAERIMARGGRRF-GA-DAKYARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 303 ~~~l~~~gI~~~pg~~f-~~-~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
.+.|.++|+.+..-... .. +.-++|+++.. +.+.++.+++.|.+++..
T Consensus 378 ~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (431)
T TIGR01788 378 SHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAY 429 (431)
T ss_pred HHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 88999999865321111 01 23468999853 788999999999988764
No 271
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.69 E-value=6.1e-15 Score=125.03 Aligned_cols=279 Identities=13% Similarity=0.082 Sum_probs=195.7
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
+..+.+.+++|+|. |.+=+|+|+.++=+.++.+++++||. |++...+|-..+.+++..|+++..+|..
T Consensus 63 I~~F~~dlaeFlg~--------D~~R~t~GARe~KfavMhal~~~gd~----vV~D~~aHYttyvAAEragl~v~eVp~t 130 (382)
T COG1103 63 IKDFLEDLAEFLGM--------DEVRVTAGAREAKFAVMHALCKEGDW----VVVDSLAHYTTYVAAERAGLNVAEVPNT 130 (382)
T ss_pred HHHHHHHHHHHhCC--------ceeeecccchhhHHHHHHHhccCCCE----EEEcCcchHHHHHHHHhcCCeEEecCCC
Confidence 47788889999996 57899999999999999999999998 8888899888899999999999988732
Q ss_pred --------cccccc------C---CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCcc
Q 018172 118 --------ANTFDK------N---NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHD 179 (360)
Q Consensus 118 --------~~~~~~------~---~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~ 179 (360)
++++.. + ..+.+.++++|...-|...+ +.+..+|+++++.++...||.-+..+.-....+.+
T Consensus 131 g~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~D 210 (382)
T COG1103 131 GYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGAD 210 (382)
T ss_pred CCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCC
Confidence 233321 1 24677889999888888888 67889999999999999999876655555678899
Q ss_pred EEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhh---------ccccCChHHHHHHHHHhcccCCCchhHHHHHHHH
Q 018172 180 IMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIEL---------GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRL 250 (360)
Q Consensus 180 i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~---------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (360)
++++|-+|+++ +.-.+|.+.. .++..+.+.+...- .+.+.-......+.+.+-...+ . -+..+.
T Consensus 211 FiVgSGHKsmA-As~PiGvl~~-~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~e----R-VkrWde 283 (382)
T COG1103 211 FIVGSGHKSMA-ASAPIGVLAM-SEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVE----R-VKRWDE 283 (382)
T ss_pred EEEecCccchh-ccCCeeEEee-hhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHH----H-HHHHHH
Confidence 99999999998 5558998877 78888887554311 0111111222222222221111 1 111122
Q ss_pred HHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC----------ch-HHHHHHHHhhCee-eeCCCC
Q 018172 251 MSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK----------ED-EDCEKLLRAERIM-ARGGRR 318 (360)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~l~~~gI~-~~pg~~ 318 (360)
--++..++.+.|.+++++.......... . .+.+..| .. -++++-|+++||. ++||.
T Consensus 284 Ev~kaR~fv~elEkigg~~qlG~rPk~H----------d-Lm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~- 351 (382)
T COG1103 284 EVEKARWFVAELEKIGGVKQLGERPKNH----------D-LMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPGQ- 351 (382)
T ss_pred HHHHHHHHHHHHHHhhhHHHhCCCCccc----------c-eeeecCchHHHHHHhCcCCceeeHHHHHhcCccccccCc-
Confidence 2334456777777777555533222110 0 1222222 11 5678899999986 55543
Q ss_pred CCCCCCeEEEEecC-ChHHHHHHHHHHHHHHhch
Q 018172 319 FGADAKYARVSMLS-REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 319 f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~ 351 (360)
..++.+|+.. +.|+++..++++++++++.
T Consensus 352 ----Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 352 ----TKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred ----eeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 6689999866 9999999999999998764
No 272
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.69 E-value=1e-14 Score=138.58 Aligned_cols=264 Identities=12% Similarity=0.031 Sum_probs=167.7
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHHHh-CC-------------eeeeecCCc--cc--
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETDYL-RS-------------GLYKWDGDA--NT-- 120 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~--~~-- 120 (360)
+.+++++++++++..+++.... .|.. +|+.-..+|.........+ |. .+..++.+. ++
T Consensus 102 ~~v~f~~SGseA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 178 (425)
T PRK07495 102 KKTIFVTTGAEAVENAVKIARAATGRS---AVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVS 178 (425)
T ss_pred CEEEECCchHHHHHHHHHHHHHhhCCC---eEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccccccc
Confidence 4799999999999998887642 2322 4887777777664332221 11 112222211 10
Q ss_pred -----------cc---cCCCeeEEEEcC-CCCCCccc-ch----HHHHHHhhhcCcEEEEeecccCCCCCc-C--CCCCC
Q 018172 121 -----------FD---KNNGAYIEVVNS-PNNPDGTI-RE----AVLAKVNRSAEGKLIHDLAYYWPQYTP-I--TGAAD 177 (360)
Q Consensus 121 -----------~~---~~~~~~~i~~~~-p~NPtG~~-~~----~~~~~~~~~~~~~li~D~ay~~~~~~~-~--~~~~~ 177 (360)
+. ...+..+|++.- .+| +|.. ++ +.+.++|+++|+++|+||+|.+..... . ....+
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~g 257 (425)
T PRK07495 179 VEQSLAALDKLFKADVDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHE 257 (425)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccC
Confidence 11 113455666543 344 8855 44 467789999999999999998432211 1 12334
Q ss_pred ccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHH
Q 018172 178 HDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNM 257 (360)
Q Consensus 178 ~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 257 (360)
.+..+.+++|.++ .|+++|++++ +.++++.+.......+++.|++++.++.+.++.+.+. . ..+.++++.++
T Consensus 258 v~pDi~tlsK~l~-~G~pigav~~-~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~--~----l~~~~~~~g~~ 329 (425)
T PRK07495 258 VAADLTTMAKGLA-GGFPLAAVTG-RAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEE--D----LCERANQLGNR 329 (425)
T ss_pred CCCCEEeehhhhc-CCccceEEEE-cHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhc--h----HHHHHHHHHHH
Confidence 5566899999999 8999999999 8899888765445567889999999888888866443 2 23333333334
Q ss_pred HHHHHHh----cCCcccCCCCCcccccccccCCCCCCcccccCCc-------h---HHHHHHHHhhCeeeeCCCCCCCCC
Q 018172 258 LRQVIRQ----SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-------D---EDCEKLLRAERIMARGGRRFGADA 323 (360)
Q Consensus 258 l~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~l~~~gI~~~pg~~f~~~~ 323 (360)
+.+.|++ ++.+. .+.+.+.++|+.+.+ . ..+...+.++|+.+.+.. ...
T Consensus 330 l~~~L~~l~~~~~~i~--------------~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g---~~~ 392 (425)
T PRK07495 330 LKQRLASLRETVPEIA--------------DIRGPGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCG---VHG 392 (425)
T ss_pred HHHHHHHHHhhCCCee--------------eeecCceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecC---CCC
Confidence 4444433 32111 122345567776632 1 456777788999987632 123
Q ss_pred CeEEEEe--cCChHHHHHHHHHHHHHHhchh
Q 018172 324 KYARVSM--LSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 324 ~~~R~s~--~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
+.+||.. ..+++++++++++|.+.+.+.+
T Consensus 393 ~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 393 NVIRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred CEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 6899974 3499999999999999997643
No 273
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.69 E-value=1.1e-14 Score=139.32 Aligned_cols=268 Identities=10% Similarity=-0.020 Sum_probs=164.8
Q ss_pred CCcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHH-HhCC--------e-----eeeecCC------
Q 018172 59 GRHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETD-YLRS--------G-----LYKWDGD------ 117 (360)
Q Consensus 59 ~~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~-~~g~--------~-----~~~~~~~------ 117 (360)
.+.+++++++++++..+++.... .|.. +|+.-+-+|........ ..+- . +..++..
T Consensus 103 ~~~v~f~~SGseA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (433)
T PRK08117 103 LDCFFFSNSGAEAIEGALKLAKHVTKRP---YIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCP 179 (433)
T ss_pred CCEEEEeCcHHHHHHHHHHHHHHhcCCC---eEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCcccccc
Confidence 35799999999999999886431 2322 37777776666543322 2110 0 1111111
Q ss_pred ------------ccccc-------cCCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCC--c
Q 018172 118 ------------ANTFD-------KNNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYT--P 171 (360)
Q Consensus 118 ------------~~~~~-------~~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~--~ 171 (360)
.+.++ ...+..+|++.......|.+.+ +.+.++|++||+++|+||+|.+.... .
T Consensus 180 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~ 259 (433)
T PRK08117 180 KGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEW 259 (433)
T ss_pred ccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccc
Confidence 00111 0134555666555566787755 46678999999999999999852111 1
Q ss_pred CC-CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHH
Q 018172 172 IT-GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRL 250 (360)
Q Consensus 172 ~~-~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (360)
.. ...+...-+.+++|.++ .|+++|++++ ++++++.+.......+++.|++++.++.+.++.+... . ..+.
T Consensus 260 ~~~~~~gv~pDi~t~sK~lg-~G~pigav~~-~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~~--~----l~~~ 331 (433)
T PRK08117 260 FAAQTFGVVPDIMTIAKGIA-SGLPLSAVVA-SKELMEQWPLGSHGTTFGGNPVACAAALATLEVIKEE--K----LLDN 331 (433)
T ss_pred hhHhhcCCCCCEeehhhhcc-CCCcceeEEE-cHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc--c----HHHH
Confidence 11 22232233579999999 8999999998 8888888765444456788999999999999865432 2 3334
Q ss_pred HHHHHHHHHHHHHhcCC-cccCCCCCcccccccccCCCCCCcccccCC------ch---HHHHHHHHhhCeeeeCCCCCC
Q 018172 251 MSERWNMLRQVIRQSGV-FGLPEYPLEYCNFTGKFTNSHPGFAWLESK------ED---EDCEKLLRAERIMARGGRRFG 320 (360)
Q Consensus 251 ~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~l~~~gI~~~pg~~f~ 320 (360)
++++.+++.+.|+++.. ..... .+++.+.++++.+. +. ..+.+.+.++||.+.+. +
T Consensus 332 ~~~~g~~l~~~L~~l~~~~~~~~-----------~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g 397 (433)
T PRK08117 332 ANEMGAYALERLEVLKEKHPVIG-----------DVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLC---G 397 (433)
T ss_pred HHHHHHHHHHHHHHHHhcCCcee-----------eeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeec---C
Confidence 44444555555544310 00000 11233334444441 21 55677788899998763 2
Q ss_pred CCCCeEEEEe--cCChHHHHHHHHHHHHHHhch
Q 018172 321 ADAKYARVSM--LSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 321 ~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~~ 351 (360)
...+++||++ ..+++++++++++|.+++.+.
T Consensus 398 ~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 398 NAGNVLRMIPPLTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred CCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 2356899995 449999999999999998654
No 274
>PRK15029 arginine decarboxylase; Provisional
Probab=99.69 E-value=7e-15 Score=145.83 Aligned_cols=226 Identities=11% Similarity=0.016 Sum_probs=146.9
Q ss_pred eecCCcccccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCC
Q 018172 17 VISGSDLMSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPY 96 (360)
Q Consensus 17 ~~~~~~~~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~ 96 (360)
++++.+.+ + ++.|. +.+..+.+|+.+|. ....++++|+|.++..++.+++++||. |+++..|
T Consensus 193 ev~glD~L--~-~p~G~----I~eAq~~aA~~fgA-------~~t~FlvNGST~gn~a~i~a~~~~gd~----Vlv~RN~ 254 (755)
T PRK15029 193 ERTSLGSL--L-DHTGA----FGESEKYAARVFGA-------DRSWSVVVGTSGSNRTIMQACMTDNDV----VVVDRNC 254 (755)
T ss_pred cccCCCCC--C-CCCcH----HHHHHHHHHHHhCC-------CcEEEEeCChhHHHHHHHHHhcCCCCE----EEeeccc
Confidence 56665554 2 33444 49999999999995 468999999999999999999999998 9999999
Q ss_pred CCCcHHHHHHhCCeeeeecCCccc------cc--------------cCCCee--------EEEEcCCCCCCcccch-HHH
Q 018172 97 YSQYPAETDYLRSGLYKWDGDANT------FD--------------KNNGAY--------IEVVNSPNNPDGTIRE-AVL 147 (360)
Q Consensus 97 ~~~~~~~~~~~g~~~~~~~~~~~~------~~--------------~~~~~~--------~i~~~~p~NPtG~~~~-~~~ 147 (360)
|.+..+.+.+.|++++.+....+. +. ..+.++ ++++++|+ .-|++++ +.+
T Consensus 255 HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PT-Y~Gv~~di~~I 333 (755)
T PRK15029 255 HKSIEQGLILTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT-YDGVCYNAKEA 333 (755)
T ss_pred HHHHHHHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCC-CcceeeCHHHH
Confidence 999999999999999987533211 11 123344 99999997 5899988 677
Q ss_pred HHHhhhcCcEEEEeecccC-----CCCCc---CC----CCCCcc-EEEeccccccCCCCceEE-EEeecCHH-H--HHHH
Q 018172 148 AKVNRSAEGKLIHDLAYYW-----PQYTP---IT----GAADHD-IMLFTLSKCTGHAGSRIG-WALVKDTE-V--ARKM 210 (360)
Q Consensus 148 ~~~~~~~~~~li~D~ay~~-----~~~~~---~~----~~~~~~-i~~~S~sK~~~~~G~r~G-~~~~~~~~-~--~~~l 210 (360)
.++|+++++.+++||||+. +.++. +. ...+.+ +++.|.||.++ ++..| ++...+.. . .+++
T Consensus 334 ~~~~h~~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~--alTQaS~LHv~~~~~~id~~r~ 411 (755)
T PRK15029 334 QDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLN--ALSQASYIHVREGRGAINFSRF 411 (755)
T ss_pred HHHHHhcCCeEEEECccccccccCccccccccccccccccCCCceEEEEchhhccc--chhhhhhheeCCCccccCHHHH
Confidence 7777789999999999983 11221 10 113455 99999999975 44444 55552221 1 1344
Q ss_pred HHHHhhc-cccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 018172 211 TRFIELG-SIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSG 266 (360)
Q Consensus 211 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 266 (360)
+...... +.+++-+....+-.+...+.. ...++..+.+.++...+++.+++++
T Consensus 412 ~~~l~~~qSTSPSY~LmASLD~ar~~m~~---~~G~~l~~~~i~~~~~~r~~l~~~~ 465 (755)
T PRK15029 412 NQAYMMHATTSPLYAICASNDVAVSMMDG---NSGLSLTQEVIDEAVDFRQAMARLY 465 (755)
T ss_pred HHHHHHHcCCCcHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 4333322 233333333222222222211 1233444445555556666665553
No 275
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.68 E-value=2.3e-16 Score=137.70 Aligned_cols=295 Identities=14% Similarity=0.122 Sum_probs=204.0
Q ss_pred ccccCCCCccccccHHHHHHHHHH-HhhcCCCCCCCCcEEEc--CChHHHHHHHHHhh--cCCCCCCCceEEEeCCCCCC
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNL-HHVVDNAVSDGRHIVIG--TGSTQLYQAALYAL--SSPGGPEPISVVSAAPYYSQ 99 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~-~~~~~~~~~~~~~i~~t--~G~t~~l~~~~~~l--~~~gd~~~~~vl~~~p~~~~ 99 (360)
-.|-+..|. +++.+..+++ +| .+.+.-++.+|+.+ -++|.++......| +-++.. |.+|.|+|.+
T Consensus 89 KEYlpI~Gl-----~eF~k~sakLa~G-~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~----I~ip~PTWgN 158 (427)
T KOG1411|consen 89 KEYLPITGL-----AEFNKLSAKLALG-DNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRD----IYIPDPTWGN 158 (427)
T ss_pred chhccccch-----HHHHHHHHHHhhc-CCchhhhccceeEEEeccCcchhhHHHHHHHhhccccc----eeecCCcccc
Confidence 358899998 9999999998 55 34444455556544 55677877765554 445666 9999999999
Q ss_pred cHHHHHHhCCeeeeec--------CCcccccc-----CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEee
Q 018172 100 YPAETDYLRSGLYKWD--------GDANTFDK-----NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDL 162 (360)
Q Consensus 100 ~~~~~~~~g~~~~~~~--------~~~~~~~~-----~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ 162 (360)
...+++..|..+..+. +|.+++.. .+..-.++..+.|||||+-.+ +.+..+-++.+.+-+.|-
T Consensus 159 h~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDm 238 (427)
T KOG1411|consen 159 HKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDM 238 (427)
T ss_pred cCccccccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhh
Confidence 9999999999987554 23333222 234445555678999999877 244455556999999999
Q ss_pred cccCCCCCcC----------CCCCCccEEEeccccccCCCCceEEEE--eecCHHHHHHH----HHHHhhccccCChHHH
Q 018172 163 AYYWPQYTPI----------TGAADHDIMLFTLSKCTGHAGSRIGWA--LVKDTEVARKM----TRFIELGSIGVSKESQ 226 (360)
Q Consensus 163 ay~~~~~~~~----------~~~~~~~i~~~S~sK~~~~~G~r~G~~--~~~~~~~~~~l----~~~~~~~~~~~~~~~~ 226 (360)
+|.++.-..+ .......++..|+.|..|+.|.|+|.+ ++.+.+...++ ..+.+...++++..+.
T Consensus 239 AYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGA 318 (427)
T KOG1411|consen 239 AYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGA 318 (427)
T ss_pred hhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccch
Confidence 9995322221 134566788999999999999999964 55566555554 4444555566777777
Q ss_pred HHHHHHhccc--CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHH
Q 018172 227 LRAAKILGIV--SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEK 304 (360)
Q Consensus 227 ~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (360)
..++..|+.. ..++...+.-+.+++...|+.+.+.|...+-.. .+ ..+....++|.+..+. ++.+..
T Consensus 319 rIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~------~W----~hI~~QIGMF~fTgl~-peQv~~ 387 (427)
T KOG1411|consen 319 RIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPG------NW----SHITKQIGMFCFTGLN-PEQVDW 387 (427)
T ss_pred hhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCc------cH----HHHHHhhheeeecCCC-HHHHHH
Confidence 7777777742 234567778888999999999999998774211 00 1122334445444443 388888
Q ss_pred HHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHHh
Q 018172 305 LLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQG 349 (360)
Q Consensus 305 ~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~~ 349 (360)
+-++++|++.- ++ |+|++. +......+.++|.++..
T Consensus 388 l~ke~~iYmT~-------dG--RiS~aG~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 388 LTKEYHIYLTK-------DG--RISMAGLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred HHhhheeeecc-------Cc--eEeeccccccCCcccchhhHhHhc
Confidence 88899999763 22 899977 77778888888877654
No 276
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.64 E-value=7.9e-14 Score=133.43 Aligned_cols=260 Identities=14% Similarity=0.047 Sum_probs=163.6
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHHHh-CC-------------eeeeec--CCccc--
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETDYL-RS-------------GLYKWD--GDANT-- 120 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~--~~~~~-- 120 (360)
+.+++++++++++..+++.... .|.. +|+...++|......+-.. +. .+..++ ...+.
T Consensus 118 ~~v~f~~sGseA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (443)
T PRK06058 118 KRSALFNSGAEAVENAVKIARSYTGRQ---AVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPK 194 (443)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhhCCC---eEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCccccccc
Confidence 3788888889999998885421 1222 3888899998887554332 11 111111 11100
Q ss_pred -------------c---c---cCCCeeEEEEcCCCCCC-cccch-----HHHHHHhhhcCcEEEEeecccCCCCCc-CC-
Q 018172 121 -------------F---D---KNNGAYIEVVNSPNNPD-GTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTP-IT- 173 (360)
Q Consensus 121 -------------~---~---~~~~~~~i~~~~p~NPt-G~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~-~~- 173 (360)
+ + ..+++.+|+ ..|.+.. |.+.+ +.+.++|+++|+++|.||++.+..... ..
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa 273 (443)
T PRK06058 195 GLATDGEEAAARAITVIEKQVGADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFA 273 (443)
T ss_pred ccccchHHHHHHHHHHHHHhhCCCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhH
Confidence 0 0 013344444 5565554 55543 467789999999999999998532111 11
Q ss_pred -CCC--CccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHH
Q 018172 174 -GAA--DHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRL 250 (360)
Q Consensus 174 -~~~--~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (360)
... .-++ -+++|.++ .|+++|++++ ++++++.+.......+++.|++++.++.+.|+.+.+. +..+.
T Consensus 274 ~~~~gv~PDi--v~~gK~l~-~G~Pi~av~~-~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~------~l~~~ 343 (443)
T PRK06058 274 CEHEGIVPDL--ITTAKGIA-GGLPLSAVTG-RAEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEED------DLVAR 343 (443)
T ss_pred HHhcCCCCCE--EEEccccc-CCCccEEEEE-cHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHc------CHHHH
Confidence 111 1233 35579999 8999999999 7899888865555578889999999999999865432 34444
Q ss_pred HHHHHHHHHHHHHhc----CCcccCCCCCcccccccccCCCCCCcccccC-------Cch---HHHHHHHHhhCeeeeCC
Q 018172 251 MSERWNMLRQVIRQS----GVFGLPEYPLEYCNFTGKFTNSHPGFAWLES-------KED---EDCEKLLRAERIMARGG 316 (360)
Q Consensus 251 ~~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---~~~~~~l~~~gI~~~pg 316 (360)
.+++.+++.+.|+++ +.+.-....|.+ +.+.+ ++. ..+.+.+.++||.+.|+
T Consensus 344 ~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~--------------~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~ 409 (443)
T PRK06058 344 ARQIEALMTDRLRALAAEDDRIGDVRGRGAM--------------IAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTC 409 (443)
T ss_pred HHHHHHHHHHHHHHHHhhCCcEEeeeccceE--------------EEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEecc
Confidence 455555555555543 322112233333 22222 111 44566677899999986
Q ss_pred CCCCCCCCeEEEE--ecCChHHHHHHHHHHHHHHhc
Q 018172 317 RRFGADAKYARVS--MLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 317 ~~f~~~~~~~R~s--~~~~~e~~~~~~~~l~~~~~~ 350 (360)
..|+ +++|+. +..++++++++++++.+++.+
T Consensus 410 ~~~~---~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 410 GTYG---NVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred CCCC---CEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 5554 489995 555999999999999999864
No 277
>PRK04311 selenocysteine synthase; Provisional
Probab=99.64 E-value=1.8e-13 Score=130.30 Aligned_cols=285 Identities=15% Similarity=0.112 Sum_probs=179.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCC------cHHHHHHhCCeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQ------YPAETDYLRSGLY 112 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~------~~~~~~~~g~~~~ 112 (360)
..+++.+++++|. + +.+++++++.++.+++..+ .+||+ |++++..+.. ....++..|++++
T Consensus 130 ~~~e~~lA~l~Ga-------e-~a~vv~sgtaAl~l~l~~l-~~Gde----VIvs~~e~~~~ggs~~i~~~~~~~G~~l~ 196 (464)
T PRK04311 130 RALAALLCALTGA-------E-DALVVNNNAAAVLLALNAL-AAGKE----VIVSRGELVEIGGAFRIPDVMRQAGARLV 196 (464)
T ss_pred HHHHHHHHHHhCC-------C-eEEEECCHHHHHHHHHHHh-CCCCE----EEEcchhhhhcCcchhhHHHHHHCCcEEE
Confidence 6889999999984 3 4677777889998888664 67888 9999764432 2345677899998
Q ss_pred eecCCcc----cccc--CCCeeEEEEcCCCCC--Cc--ccch-HHHHHHhhhcCcEEEEeecccC---------CCCCcC
Q 018172 113 KWDGDAN----TFDK--NNGAYIEVVNSPNNP--DG--TIRE-AVLAKVNRSAEGKLIHDLAYYW---------PQYTPI 172 (360)
Q Consensus 113 ~~~~~~~----~~~~--~~~~~~i~~~~p~NP--tG--~~~~-~~~~~~~~~~~~~li~D~ay~~---------~~~~~~ 172 (360)
.++.+.. .+.. +++|++|++.+++|| +| ...+ +.+.++|+++|+++++|.+.+. ...+.+
T Consensus 197 ~v~~~~~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~ 276 (464)
T PRK04311 197 EVGTTNRTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTV 276 (464)
T ss_pred EECCCCCCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCch
Confidence 8875421 2222 578999999999998 45 3445 6788888889999999995431 011111
Q ss_pred C--CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCc--------hh
Q 018172 173 T--GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDY--------PN 242 (360)
Q Consensus 173 ~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~ 242 (360)
. -..+.+++++|.+|.+|-| ..|++++ ++++++.+++...............+..+.+....+.. ..
T Consensus 277 ~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g-~~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~ 353 (464)
T PRK04311 277 QELLAAGVDLVTFSGDKLLGGP--QAGIIVG-KKELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLR 353 (464)
T ss_pred hhHHhcCCcEEEecCcccccCC--ceEEEEE-cHHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHH
Confidence 1 2367899999999988734 4898888 78888888753333333444454444444443111100 02
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC----cccCCC---CCcccccccccCCCCCCc-ccccCCc--hHHHHHHHHhhC--
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSGV----FGLPEY---PLEYCNFTGKFTNSHPGF-AWLESKE--DEDCEKLLRAER-- 310 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~l~~~g-- 310 (360)
.+....+.++++.+.+.+.|+.+.. ..+... .|+. +.... ..+.+ +.++..+ ...+.+.|++..
T Consensus 354 ~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg-s~p~~---~~~~~~v~~~~~~~~~~~l~~~lr~~~~~ 429 (464)
T PRK04311 354 LLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGG-SLPVD---RLPSAAVTLTPKDRSLEALAARLRLLPPP 429 (464)
T ss_pred HhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCC-CCcCC---CCCeEEEEEeCCCCCHHHHHHHHhcCCCC
Confidence 2333346667788888888877641 122211 1111 11110 11111 2233222 278888898854
Q ss_pred eeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHHh
Q 018172 311 IMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQG 349 (360)
Q Consensus 311 I~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~~ 349 (360)
|..+. .++.+.+-+-. .++|++.+++++.+++.
T Consensus 430 i~~r~------~~~~~~ld~r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 430 VIGRI------EDGRLLLDLRTLEEEDEERLAAALLEALN 463 (464)
T ss_pred EEEEE------ECCEEEEEeCcCCHHHHHHHHHHHHHHhh
Confidence 44442 46678887755 88999999999998864
No 278
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.63 E-value=6e-14 Score=124.33 Aligned_cols=288 Identities=16% Similarity=0.137 Sum_probs=194.4
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH----HHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE----TDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~----~~~~g~~~~~ 113 (360)
...|++.++.+.|- .. -+.+++++.++..++..|.++||+ |+.+.--|...... ++.+|+++..
T Consensus 64 ~~vlE~RiAaLEGG-------~a-a~a~aSG~AA~~~ai~~la~aGD~----iVss~~LYGGT~~lf~~tl~~~Gi~v~f 131 (426)
T COG2873 64 TDVLEERIAALEGG-------VA-ALAVASGQAAITYAILNLAGAGDN----IVSSSKLYGGTYNLFSHTLKRLGIEVRF 131 (426)
T ss_pred HHHHHHHHHHhhcc-------hh-hhhhccchHHHHHHHHHhccCCCe----eEeeccccCchHHHHHHHHHhcCcEEEE
Confidence 38899999999773 22 344555689999999999999999 99998888887766 4667999999
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+ ++.+.. +++||+|++.+-.||-+.+.+ +.+.++|+++++.+|+|..+..+ +..-+-..+.+|+++|.||..
T Consensus 132 vd~~d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atp-yl~rP~~hGADIVvHS~TK~i 210 (426)
T COG2873 132 VDPDDPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATP-YLCRPIEHGADIVVHSATKYI 210 (426)
T ss_pred eCCCCHHHHHHHhCcccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcc-eecchhhcCCCEEEEeecccc
Confidence 9755 366655 789999999999999999999 78889999999999999998764 444556788899999999998
Q ss_pred CCCCceEEEEeecCHHHHHHH----------------------------------HHHHhhccccCChHHHHHHHHHhcc
Q 018172 190 GHAGSRIGWALVKDTEVARKM----------------------------------TRFIELGSIGVSKESQLRAAKILGI 235 (360)
Q Consensus 190 ~~~G~r~G~~~~~~~~~~~~l----------------------------------~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (360)
|-.|--+|.++. +....+.- ....+..+.+.+++........+
T Consensus 211 gGhGt~iGG~iV-D~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGl-- 287 (426)
T COG2873 211 GGHGTAIGGVIV-DGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGL-- 287 (426)
T ss_pred cCCccccceEEE-eCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhch--
Confidence 878888888877 32111111 00111123344444444443333
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcc----ccccccc-CCCCCCcccccCCch----HHHHHHH
Q 018172 236 VSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEY----CNFTGKF-TNSHPGFAWLESKED----EDCEKLL 306 (360)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~l 306 (360)
+-+.-..++-.++...+.+.|.++|.+..+.++|.. +....++ ..+.+..+.+.++++ ..+.+.|
T Consensus 288 ------ETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi~~l 361 (426)
T COG2873 288 ------ETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFIDAL 361 (426)
T ss_pred ------hhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecChHHHHHHHHHHH
Confidence 333444566677888999999999988888777532 1111112 234445677888775 2222222
Q ss_pred H----------hhCeeeeCCCCC------------CCCCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 307 R----------AERIMARGGRRF------------GADAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 307 ~----------~~gI~~~pg~~f------------~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
+ .+-+.+-|.+-. |..++.+|+|+.. |+++.++.-|++.++
T Consensus 362 ~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI--Ed~~DiiaDl~qAl~ 424 (426)
T COG2873 362 KLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI--EDIDDIIADLEQALE 424 (426)
T ss_pred HHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc--CCHHHHHHHHHHHHh
Confidence 1 223344454322 3347789999866 233445555555544
No 279
>PLN03032 serine decarboxylase; Provisional
Probab=99.62 E-value=1.2e-13 Score=128.05 Aligned_cols=268 Identities=13% Similarity=0.041 Sum_probs=174.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcE--EEcCChHHHHHHHHHhhcC--CCCCCCceEEEeCCCCCCcHHHHHHhCCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHI--VIGTGSTQLYQAALYALSS--PGGPEPISVVSAAPYYSQYPAETDYLRSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i--~~t~G~t~~l~~~~~~l~~--~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~ 114 (360)
.++++.++++++. +++++ ++|+|+|+++...+....+ +++. |+++.-.|.+...+++.+|.++..+
T Consensus 69 ~~v~~~ia~llg~------~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~----vi~s~~~H~Sv~kaa~~lg~~~~~V 138 (374)
T PLN03032 69 VGVLDWFARLWEL------EKDEYWGYITTCGTEGNLHGILVGREVFPDGI----LYASRESHYSVFKAARMYRMEAVKV 138 (374)
T ss_pred HHHHHHHHHHhCC------CCccCCEEEeCchHHHHHHHHHHHHHhCCCcE----EEeCCCceeHHHHHHHHcCCCCeEe
Confidence 3445555566664 44455 9999999999887776542 3344 9999999999999999999998888
Q ss_pred cCCccccc-c-------CC---CeeEEEEcCCCCCCcccch-HHHHHHhhhcC-----cEEEEeecccCCCCCc------
Q 018172 115 DGDANTFD-K-------NN---GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAE-----GKLIHDLAYYWPQYTP------ 171 (360)
Q Consensus 115 ~~~~~~~~-~-------~~---~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~-----~~li~D~ay~~~~~~~------ 171 (360)
+.|.++.. . ++ ++.+|+++..||+||.+-+ +++.++|+++| +|+.+|.+|+++..+.
T Consensus 139 ~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~ 218 (374)
T PLN03032 139 PTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPE 218 (374)
T ss_pred eeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcc
Confidence 87755332 1 12 5778888999999999988 78888888886 5899999998643221
Q ss_pred CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhc-----cc--cCChHHHHHHHHHhcccCCCchhHH
Q 018172 172 ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELG-----SI--GVSKESQLRAAKILGIVSDDYPNFF 244 (360)
Q Consensus 172 ~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~-----~~--~~~~~~~~~~~~~l~~~~~~~~~~~ 244 (360)
+......+.+..|.+|.++ ....+|.++.+ .+..+.+.....+. +. +-+......+...+..+ + .+-+
T Consensus 219 ~~~~~~vDSis~s~HK~~g-~P~g~G~ll~r-~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~-G--~~g~ 293 (374)
T PLN03032 219 VTFRKPIGSVSVSGHKFLG-CPMPCGVALTR-KKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRK-G--YRGI 293 (374)
T ss_pred cCCCcCCcEEEECcccccC-CCcCeEEEEEE-chhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHh-C--HHHH
Confidence 1112245678889999887 34458988884 45555442211111 11 22233444555555533 2 2677
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCC
Q 018172 245 EYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAK 324 (360)
Q Consensus 245 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~ 324 (360)
.+..++..++.+++.+.|++.+...+..|... .+.+..+..+. +. +|-.+.+ .++
T Consensus 294 ~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~~~--------------~V~f~~~~~~~----~~-~~w~l~~------~~~ 348 (374)
T PLN03032 294 KRDVQHCMRNAHYLKDRLTEAGLTCRLNELSS--------------TVVFERPMDEA----FI-KKWQLAC------EGD 348 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcEEECCCce--------------EEEEcCCCcHh----Hh-heeeecc------cCC
Confidence 77778888888999999988754444444321 23344433221 11 2332222 245
Q ss_pred eEEEEecC--ChHHHHHHHHHHHH
Q 018172 325 YARVSMLS--REEIFNIFLERLSA 346 (360)
Q Consensus 325 ~~R~s~~~--~~e~~~~~~~~l~~ 346 (360)
.+|+++.. +++.++++++.|++
T Consensus 349 ~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 349 IAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred EEEEEECCCCCHHHHHHHHHHHhc
Confidence 89998866 77999999988875
No 280
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.62 E-value=1.4e-13 Score=131.19 Aligned_cols=267 Identities=12% Similarity=-0.001 Sum_probs=161.2
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHHhCC-------------eeeeecCCccc--
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDYLRS-------------GLYKWDGDANT-- 120 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~-- 120 (360)
+.+.+++++++++..+++.... .|.+.+.+|+.-+-+|......+..... .+..++...+.
T Consensus 103 ~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 182 (423)
T PRK05964 103 DHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYE 182 (423)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhH
Confidence 4799999999999999887632 1211123588888878765543322211 11222222111
Q ss_pred ----------ccc-CCCeeEEEEcC-CCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCc-C-C-CCCCccE
Q 018172 121 ----------FDK-NNGAYIEVVNS-PNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTP-I-T-GAADHDI 180 (360)
Q Consensus 121 ----------~~~-~~~~~~i~~~~-p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~-~-~-~~~~~~i 180 (360)
+.. ..+..+|++.. .++..|...+ +.+.++|+++|+++|+||++.+..... . . ...+...
T Consensus 183 ~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~p 262 (423)
T PRK05964 183 QATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSP 262 (423)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCC
Confidence 111 23455566544 3667887764 466789999999999999997422111 1 1 1122222
Q ss_pred EEeccccccCCCCceEEEEeecCHHHHHHHHHH------HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHH
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTEVARKMTRF------IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSER 254 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 254 (360)
-+.+++|.++-.++++|++++ ++++.+.+... ....+++.|+++..++.+.++.+.+. ...++.+ ++
T Consensus 263 Di~~~~K~l~gG~~p~~av~~-~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~--~~~~~~~----~~ 335 (423)
T PRK05964 263 DIMCLSKGLTGGYLPLAATLC-TAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDE--PVLERVA----AL 335 (423)
T ss_pred CeeeeehhhhcCcccceEEEE-cHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhc--CHHHHHH----HH
Confidence 245788999833389999888 89999888532 12345568889988888888865432 4444444 44
Q ss_pred HHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc------hHHHHHHHHhhCeeeeCCCCCCCCCCeEEE
Q 018172 255 WNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE------DEDCEKLLRAERIMARGGRRFGADAKYARV 328 (360)
Q Consensus 255 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~ 328 (360)
-+++.+.|+++....... .+.+.+.++.+.+.+ ...+.+.|.++||.+.+. .+.+||
T Consensus 336 g~~l~~~l~~l~~~~~i~-----------~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~------~~~lR~ 398 (423)
T PRK05964 336 SAGLAEGLEPFRDLPGVA-----------DVRVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPL------GNTIYL 398 (423)
T ss_pred HHHHHHHHHhhccCCCeE-----------EeecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEec------CCEEEE
Confidence 444444444432111100 011223333343332 256777888999999872 247999
Q ss_pred Eec--CChHHHHHHHHHHHHHHhc
Q 018172 329 SML--SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 329 s~~--~~~e~~~~~~~~l~~~~~~ 350 (360)
+.. .++++++++++++.+++.+
T Consensus 399 ~p~l~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 399 MPPYIITAEELDRITDAIVEVADE 422 (423)
T ss_pred eCCcccCHHHHHHHHHHHHHHHhh
Confidence 865 4999999999999999864
No 281
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.62 E-value=1.1e-13 Score=136.17 Aligned_cols=149 Identities=13% Similarity=0.116 Sum_probs=111.5
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH-HHHhCCeeeeecC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE-TDYLRSGLYKWDG 116 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~-~~~~g~~~~~~~~ 116 (360)
..+..+.+|+.+|. .+..++++|+|.++..++.+++.+||. ||++..||.+..+. +.+.|++++.+..
T Consensus 176 i~eAq~~AA~~fgA-------d~tyFlvNGTS~gn~a~i~a~~~~Gd~----VLvdRN~HKSv~hgaLiLsGa~PVYl~P 244 (720)
T PRK13578 176 AKDAQKHAAKVFNA-------DKTYFVLNGTSASNKVVTNALLTPGDL----VLFDRNNHKSNHHGALIQAGATPVYLET 244 (720)
T ss_pred HHHHHHHHHHHhCC-------CceEEEeCChhHHHHHHHHHhcCCCCE----EEeecccHHHHHHHHHHHcCCeEEEeec
Confidence 49999999999995 468999999999999999999999998 99999999999985 8999999998764
Q ss_pred Ccccc------c--------------cC-CC-------eeEEEEcCCCCCCcccch-HHHHH-HhhhcCcEEEEeecccC
Q 018172 117 DANTF------D--------------KN-NG-------AYIEVVNSPNNPDGTIRE-AVLAK-VNRSAEGKLIHDLAYYW 166 (360)
Q Consensus 117 ~~~~~------~--------------~~-~~-------~~~i~~~~p~NPtG~~~~-~~~~~-~~~~~~~~li~D~ay~~ 166 (360)
..+.+ . .. ++ .+++++++|+ .-|.+++ +.+.+ +++.++ .|++||||+.
T Consensus 245 ~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~ydi~~I~~~~~h~~~-~llvDEAhga 322 (720)
T PRK13578 245 ARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGT-YDGTIYNARQVVDKIGHLCD-YILFDSAWVG 322 (720)
T ss_pred cccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCC-CcceeecHHHHHHHhhccCC-cEEEeCcchh
Confidence 32211 1 01 22 5899999997 5899988 44544 477667 9999999983
Q ss_pred -CC-------CCcCCCCCCc----cEEEeccccccCCCCceEE-EEee
Q 018172 167 -PQ-------YTPITGAADH----DIMLFTLSKCTGHAGSRIG-WALV 201 (360)
Q Consensus 167 -~~-------~~~~~~~~~~----~i~~~S~sK~~~~~G~r~G-~~~~ 201 (360)
.. ++......+. ++++.|.||.++ ++-.+ ++..
T Consensus 323 h~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~--alTQaS~LHv 368 (720)
T PRK13578 323 YEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQA--GFSQTSQIHK 368 (720)
T ss_pred hhccCcccccCChhhhhcCCCCCCeEEEEChhhcch--hhhhHhhhhc
Confidence 11 1212122333 389999999875 44444 5555
No 282
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.61 E-value=1.2e-14 Score=134.92 Aligned_cols=235 Identities=16% Similarity=0.067 Sum_probs=147.8
Q ss_pred eeecCCcccccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCC
Q 018172 16 MVISGSDLMSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAP 95 (360)
Q Consensus 16 ~~~~~~~~~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p 95 (360)
++.++.+.+ .++.|. +.+.++.+|+.+|. .+..++++|+|.++..++.+++++||. |+++..
T Consensus 53 te~~~lD~L---~~p~G~----I~eAe~~aA~~fGA-------d~t~flvnGsT~g~~a~i~a~~~~gd~----VLv~RN 114 (417)
T PF01276_consen 53 TEVPGLDDL---HDPEGI----IKEAEELAARAFGA-------DKTFFLVNGSTSGNQAMIMALCRPGDK----VLVDRN 114 (417)
T ss_dssp TTSTTCBBT---TTTBTH----HHHHHHHHHHHHTE-------SEEEEESSHHHHHHHHHHHHHTTTTCE----EEEETT
T ss_pred hcccccCcc---cCCccH----HHHHHHHHHHhcCC-------CeEEEEecCchHHHHHHHHHhcCCCCE----EEEcCC
Confidence 455665543 344555 59999999999995 458999999999999999999999998 999999
Q ss_pred CCCCcHHHHHHhCCeeeeecCCcccc--------------------ccCCCeeE---EEEcCCCCCCcccch-HHHHHHh
Q 018172 96 YYSQYPAETDYLRSGLYKWDGDANTF--------------------DKNNGAYI---EVVNSPNNPDGTIRE-AVLAKVN 151 (360)
Q Consensus 96 ~~~~~~~~~~~~g~~~~~~~~~~~~~--------------------~~~~~~~~---i~~~~p~NPtG~~~~-~~~~~~~ 151 (360)
||.++...+.+.|++++.++...+.+ ...+..++ +++++|+ .-|++++ +.+.++|
T Consensus 115 ~HkSv~~alil~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PT-Y~Gv~~di~~I~~~~ 193 (417)
T PF01276_consen 115 CHKSVYNALILSGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPT-YYGVCYDIKEIAEIC 193 (417)
T ss_dssp --HHHHHHHHHHTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE-HHHHHHHH
T ss_pred cHHHHHHHHHHcCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCC-CCeEEECHHHHHHHh
Confidence 99999999999999999776432211 11345555 9999997 5899998 6777777
Q ss_pred hhcCcEEEEeecccC-CCCCcCC---CCCCcc-------EEEeccccccCCCCce-EEEEeecCHH--HHHHHHHHHhh-
Q 018172 152 RSAEGKLIHDLAYYW-PQYTPIT---GAADHD-------IMLFTLSKCTGHAGSR-IGWALVKDTE--VARKMTRFIEL- 216 (360)
Q Consensus 152 ~~~~~~li~D~ay~~-~~~~~~~---~~~~~~-------i~~~S~sK~~~~~G~r-~G~~~~~~~~--~~~~l~~~~~~- 216 (360)
.++++.|++||||+. ..+.+++ ...+.+ +++.|.+|.++ ++. .+++...+.. -.+++......
T Consensus 194 h~~~~~llvDEAhGah~~F~~lp~~a~~~gad~~~~~~~~vvqS~HKtL~--altQts~lh~~~~~~v~~~~~~~~l~~~ 271 (417)
T PF01276_consen 194 HKHGIPLLVDEAHGAHFGFHPLPRSALALGADRPNDPGIIVVQSTHKTLP--ALTQTSMLHVKGDRIVDHERVNEALSMH 271 (417)
T ss_dssp CCTECEEEEE-TT-TTGGCSGGGTTCSSTTSS-CTSBEEEEEEEHHHHSS--S-TT-EEEEEETCCCTTHHHHHHHHHHH
T ss_pred cccCCEEEEEccccccccCCCCccchhhccCccccccceeeeechhhccc--ccccceEEEecCCCcccHHHHHHHHHHH
Confidence 789999999999983 1111222 233444 99999999875 333 4566664332 23445443332
Q ss_pred ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHH---HhcCCcccCCCC
Q 018172 217 GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVI---RQSGVFGLPEYP 274 (360)
Q Consensus 217 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l---~~~~~~~~~~~~ 274 (360)
.+.+++-+....+..+...+.. ..-++..+...++.+.+++.+ +++.++.+..|+
T Consensus 272 ~TTSPSY~lmASlD~a~~~m~~---~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~ 329 (417)
T PF01276_consen 272 QTTSPSYPLMASLDVARAQMEE---EEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGPE 329 (417)
T ss_dssp S-SS--HHHHHHHHHHHHHHSH---HHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-S
T ss_pred cCCChHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCcc
Confidence 2334444433333333332211 344455555556666666666 555555555443
No 283
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.61 E-value=4.2e-13 Score=127.27 Aligned_cols=263 Identities=15% Similarity=0.124 Sum_probs=161.2
Q ss_pred cEEE-cCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHHHh-CC------------eeeeecCCc------c
Q 018172 61 HIVI-GTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETDYL-RS------------GLYKWDGDA------N 119 (360)
Q Consensus 61 ~i~~-t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~------~ 119 (360)
.+.+ ++++++++..+++.... .|. .+|+.-+.+|......+... |. .+..+|.+. +
T Consensus 100 ~~~f~~~sGseA~e~AlklAr~~tgr---~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 176 (412)
T TIGR02407 100 KVQFPGPTGTNAVESALKLARKVTGR---SNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVD 176 (412)
T ss_pred eEEEeCCCchHHHHHHHHHHhhhcCC---CeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchh
Confidence 4655 58899999999887743 232 24888777777775443322 21 112222211 1
Q ss_pred c---ccc--C------CCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCcC----CCCCCc
Q 018172 120 T---FDK--N------NGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTPI----TGAADH 178 (360)
Q Consensus 120 ~---~~~--~------~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~~----~~~~~~ 178 (360)
. ++. + +++.+|++....++.|...+ +.+.++|+++|+++|+||++.+. ..... ......
T Consensus 177 ~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~P 256 (412)
T TIGR02407 177 TIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEP 256 (412)
T ss_pred HHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCC
Confidence 1 110 0 24567777666788998643 46778999999999999999732 11101 011122
Q ss_pred cEEEeccccccCCC-CceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcc-cCCC-chhHHHHHHHHHHHHH
Q 018172 179 DIMLFTLSKCTGHA-GSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGI-VSDD-YPNFFEYGRRLMSERW 255 (360)
Q Consensus 179 ~i~~~S~sK~~~~~-G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~-~~~~~~~~~~~~~~~~ 255 (360)
+ +.+++|.++ + |+++|++++ ++++ +.+.......+++.|+++..++.+.++. +.+. +.+.+.++.+.++++.
T Consensus 257 D--i~~~~K~lg-~~G~pigav~~-~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l 331 (412)
T TIGR02407 257 D--IVCLSKSIS-GYGLPLALTLI-KPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERL 331 (412)
T ss_pred C--EEEechhcc-CCccceeEEEE-chhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 3 346789999 6 999999999 5665 5544333446778888888887777773 4332 2233333333333333
Q ss_pred HHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC
Q 018172 256 NMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARVSMLS 332 (360)
Q Consensus 256 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~ 332 (360)
+ +..+.++.... .+++.+.++|+.+++. ..+...+.++||.+.+...+ .+.+|++...
T Consensus 332 ~---~l~~~~~~~~~-------------~vrg~Gl~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~~~---~~~lr~~p~l 392 (412)
T TIGR02407 332 D---RIVAEYPELIK-------------QVRGRGLMQGIECGDGDLAGKIAKAAFENGLIIETSGPN---DEVIKLLPPL 392 (412)
T ss_pred H---HHHhhCCCceE-------------eeecceeEEEEEecChHHHHHHHHHHHHCCCEEeccCCC---CCEEEEECCC
Confidence 3 22233331111 1224455789988764 56778888999999874322 4579997644
Q ss_pred --ChHHHHHHHHHHHHHHhc
Q 018172 333 --REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 333 --~~e~~~~~~~~l~~~~~~ 350 (360)
++++++++++++.+.+.+
T Consensus 393 ~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 393 TIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred CCCHHHHHHHHHHHHHHHhC
Confidence 999999999999998853
No 284
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.59 E-value=1.7e-12 Score=121.04 Aligned_cols=290 Identities=10% Similarity=-0.017 Sum_probs=188.6
Q ss_pred ccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH-HH
Q 018172 27 LSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE-TD 105 (360)
Q Consensus 27 y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~-~~ 105 (360)
|.....+ .+|++++++++|. + .++.|+++|.++++++...+++||. | +.++|...... +.
T Consensus 67 yag~~s~-----~~lE~~va~~~G~-------~-~av~v~sGT~Al~ll~~l~l~pGDe----V--psn~~f~Tt~ahIe 127 (450)
T TIGR02618 67 YAGSRNF-----YHLERTVRELYGF-------K-YVVPTHQGRGAENLLSQIAIKPGDY----V--PGNMYFTTTRYHQE 127 (450)
T ss_pred hcCCCcH-----HHHHHHHHHHHCC-------C-eEEEcCCHHHHHHHHHHhCCCCcCE----E--CCceeHHHHHHHHH
Confidence 5544444 8999999999995 3 6999999999999888777899996 6 66777555554 67
Q ss_pred HhCCeeeeecCC----------------cccccc--C----CCeeEEEEcCCCCCC-cccch----HHHHHHhhhcCcEE
Q 018172 106 YLRSGLYKWDGD----------------ANTFDK--N----NGAYIEVVNSPNNPD-GTIRE----AVLAKVNRSAEGKL 158 (360)
Q Consensus 106 ~~g~~~~~~~~~----------------~~~~~~--~----~~~~~i~~~~p~NPt-G~~~~----~~~~~~~~~~~~~l 158 (360)
..|+.++.++.+ .+.++. + +++++|.+.+++|-. |..++ +.+.++|+++|+.+
T Consensus 128 ~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~v 207 (450)
T TIGR02618 128 KNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKV 207 (450)
T ss_pred hCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEE
Confidence 788877666332 111111 1 245578888888854 78866 56778899999999
Q ss_pred EEeecccCCCCCc-------CCC----------CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhc----
Q 018172 159 IHDLAYYWPQYTP-------ITG----------AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELG---- 217 (360)
Q Consensus 159 i~D~ay~~~~~~~-------~~~----------~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~---- 217 (360)
+.|.+...++.-. ..+ ....+.+++|..|.++.+- .|++++.++++.+.++......
T Consensus 208 i~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~--GG~l~~~d~~l~~k~r~~~~~~eG~~ 285 (450)
T TIGR02618 208 FYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNI--GGFLCMNDDEMFQSAKELVVVFEGMP 285 (450)
T ss_pred EEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCC--ceEEEeCCHHHHHHHHHHhhhcCCcc
Confidence 9999987532111 111 1245679999999887662 2777767999999998775322
Q ss_pred ccc-CChHHHHHHHHHhcccCCCchhHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCccccc
Q 018172 218 SIG-VSKESQLRAAKILGIVSDDYPNFFE-YGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLE 295 (360)
Q Consensus 218 ~~~-~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (360)
+++ ...-...+++..|.. .++ ...+.-....++|.+.|.+. ++.+..|.++...|.+... +...
T Consensus 286 tyGgla~r~~~ala~gL~e-------~~~~~y~~~r~~~a~~La~~L~~~-Gvpv~~p~ggh~V~vda~~------~lph 351 (450)
T TIGR02618 286 SYGGLAGRDMEAMAIGIRE-------AVDYEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARR------FLPH 351 (450)
T ss_pred ccCchhhhhHHHHHHHHHH-------hhhHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCcceEEEEhHH------hCCC
Confidence 111 222333333444442 222 22233333467888888888 6767777777655443211 1122
Q ss_pred CC-----chHHHHHHHHhhCeeeeC-CCC-CCCC----------CCeEEEEecC---ChHHHHHHHHHHHHHHhch
Q 018172 296 SK-----EDEDCEKLLRAERIMARG-GRR-FGAD----------AKYARVSMLS---REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 296 ~~-----~~~~~~~~l~~~gI~~~p-g~~-f~~~----------~~~~R~s~~~---~~e~~~~~~~~l~~~~~~~ 351 (360)
++ ....+..+-.+.||--.- |+. ++.+ -..+|+.+-. +.+.++...+++..+.++.
T Consensus 352 ~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 427 (450)
T TIGR02618 352 IPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHR 427 (450)
T ss_pred CChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhH
Confidence 22 226677777888886432 332 1211 2469999855 8899999999999998764
No 285
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.58 E-value=1.3e-13 Score=118.20 Aligned_cols=276 Identities=15% Similarity=0.076 Sum_probs=179.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC-C
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG-D 117 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~-~ 117 (360)
+.|+..+|+|+++ +| .++.+.+-++...++.+++.|.|. |+..+-.|.++...++++. +...+++ +
T Consensus 115 k~LE~kiAqfh~r-------ED-~ilypscfdANag~feail~pedA----vfSDeLNhASIIdGirLck-ry~h~dv~~ 181 (417)
T KOG1359|consen 115 KLLESKIAQFHGR-------ED-TILYPSCFDANAGAFEAILTPEDA----VFSDELNHASIIDGIRLCK-RYRHVDVFD 181 (417)
T ss_pred HHHHHHHHHHhCC-------Cc-eEEeccccccchHHHHHhcChhhh----hhccccccchhhhhhHHHh-hhccchhHH
Confidence 8999999999994 54 555556688888899999999998 8888899998888887765 2222211 1
Q ss_pred cccccc---CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC--------cCCCCCCccEEEecc
Q 018172 118 ANTFDK---NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT--------PITGAADHDIMLFTL 185 (360)
Q Consensus 118 ~~~~~~---~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~--------~~~~~~~~~i~~~S~ 185 (360)
.+.-.. +.+-|+|+....-...|.+.| +++..++++||.++++||+|+.+.+. .+.-..+.+++.+++
T Consensus 182 l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTL 261 (417)
T KOG1359|consen 182 LEHCLISACKMRLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTL 261 (417)
T ss_pred HHHHHHHhhhheEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhh
Confidence 111111 346677777777778999988 78889999999999999999842211 111245678899999
Q ss_pred ccccCCCCceEEEEeecCHHHHHHHHHHHhhcccc--CChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 018172 186 SKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIG--VSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIR 263 (360)
Q Consensus 186 sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 263 (360)
+|++| |.-.||..+ +..+++-+++-....-++ .++..-..+..+++.+.. -.+..++.+.+.+++.+.+.
T Consensus 262 gKAlG--ga~GGyttg-p~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~-----s~~~i~~~~a~~qrfr~~me 333 (417)
T KOG1359|consen 262 GKALG--GASGGYTTG-PKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMV-----SSKEIQSRQANTQRFREFME 333 (417)
T ss_pred hhhhc--CCCCCCccC-ChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHH
Confidence 99987 333499988 899999887654432222 222222222223332211 22344556666677777766
Q ss_pred hcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCC--CCCeEEEEecC--ChHH
Q 018172 264 QSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGA--DAKYARVSMLS--REEI 336 (360)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~--~~~~~R~s~~~--~~e~ 336 (360)
.. ++.+.... .+ ...+-+.+. ....+.|.+.||++...++.-. +...+|+.++. ++|+
T Consensus 334 ~a-GftIsg~~-------------hP-I~pv~lGda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~ed 398 (417)
T KOG1359|consen 334 AA-GFTISGAS-------------HP-ICPVMLGDARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEED 398 (417)
T ss_pred hc-CceecCCC-------------CC-ccceecccHHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHH
Confidence 55 34432211 00 122333343 5567778889999875443322 23457777655 9999
Q ss_pred HHHHHHHHHHHHhc
Q 018172 337 FNIFLERLSAIQGG 350 (360)
Q Consensus 337 ~~~~~~~l~~~~~~ 350 (360)
++++++++.++.+-
T Consensus 399 id~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 399 IDRLIEAFSEVGRF 412 (417)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988653
No 286
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.58 E-value=2.9e-13 Score=127.56 Aligned_cols=260 Identities=12% Similarity=0.092 Sum_probs=159.8
Q ss_pred CcEEEcCChHHHHHHHHHhhcC------CCCCCCceEEEeCCCCCCcH-HHHHHhCCeee---------eec----CCcc
Q 018172 60 RHIVIGTGSTQLYQAALYALSS------PGGPEPISVVSAAPYYSQYP-AETDYLRSGLY---------KWD----GDAN 119 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~------~gd~~~~~vl~~~p~~~~~~-~~~~~~g~~~~---------~~~----~~~~ 119 (360)
+.+++++++++++..+++.+.. +|. .+|+..+..|.... ..+...|.... .++ .|.+
T Consensus 94 ~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r---~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~ 170 (395)
T PRK03715 94 DKVFFANSGAEANEGAIKLARKWGRKHKNGA---YEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIA 170 (395)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHhhccCCCC---cEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHH
Confidence 4799999999999999988752 222 23777777777654 33333332210 010 1111
Q ss_pred cccc--CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCcC-C-CCC--CccEEEecccc
Q 018172 120 TFDK--NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTPI-T-GAA--DHDIMLFTLSK 187 (360)
Q Consensus 120 ~~~~--~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~~-~-~~~--~~~i~~~S~sK 187 (360)
.++. ++++.+|++...++..|...+ +.+.++|+++|+++|+||++.+. ..... . ... ..+ +.+++|
T Consensus 171 ~l~~~l~~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PD--i~t~gK 248 (395)
T PRK03715 171 SVEKLITDKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPD--IMTLGK 248 (395)
T ss_pred HHHHHcCCCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCc--eeeehh
Confidence 1111 245677777766667777754 46778899999999999999842 11111 0 111 223 467889
Q ss_pred ccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018172 188 CTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGV 267 (360)
Q Consensus 188 ~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 267 (360)
.++ .|+.+|.+++ .+++.. +.......+++.++++..++.+.++.+.+. +..++++++-+++.+.|+++..
T Consensus 249 ~lg-~G~p~~av~~-~~~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l~~~------~l~~~~~~~g~~l~~~L~~l~~ 319 (395)
T PRK03715 249 GIG-GGVPLAALLA-KAEVAV-FEAGDQGGTYNGNPLMTAVGVAVISQLLAP------GFLEGVRARGEYLKEKLLELSE 319 (395)
T ss_pred hhh-CCcceEEEEE-cccccc-ccCCCcCCCCCCCHHHHHHHHHHHHHHHhc------cHHHHHHHHHHHHHHHHHHHhh
Confidence 999 7899999988 666642 222122356677888888888888765432 3445555555666666654410
Q ss_pred -cccCCCCCcccccccccCCCCCCcccccCCch--HHHHHHHHhh---CeeeeCCCCCCCCCCeEEEEecC--ChHHHHH
Q 018172 268 -FGLPEYPLEYCNFTGKFTNSHPGFAWLESKED--EDCEKLLRAE---RIMARGGRRFGADAKYARVSMLS--REEIFNI 339 (360)
Q Consensus 268 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~---gI~~~pg~~f~~~~~~~R~s~~~--~~e~~~~ 339 (360)
..+.. +++.+.++.+.+.+. ..+.+.+.+. ||.+.+. ..+.+||+... +++++++
T Consensus 320 ~~~i~~------------vrG~Glm~~i~l~~~~~~~~~~~~~~~~~~Gi~~~~~-----~~~~lR~~p~l~~t~~ei~~ 382 (395)
T PRK03715 320 ERGLEG------------ERGEGLLRALLLGKDIGPQIVEKARDMQPDGLLLNAP-----RPNLLRFMPALNVTTEEIDQ 382 (395)
T ss_pred cCCcCe------------EEcceeEEEEEecCchHHHHHHHHHhccCCCEEEeec-----CCCEEEEeCCcccCHHHHHH
Confidence 00111 123344555655442 3445555555 9998652 13589998754 9999999
Q ss_pred HHHHHHHHHhc
Q 018172 340 FLERLSAIQGG 350 (360)
Q Consensus 340 ~~~~l~~~~~~ 350 (360)
++++|.+.+.+
T Consensus 383 ~~~~l~~~l~~ 393 (395)
T PRK03715 383 MIAMLRSVLDK 393 (395)
T ss_pred HHHHHHHHHHh
Confidence 99999998864
No 287
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=1e-12 Score=125.56 Aligned_cols=268 Identities=10% Similarity=0.022 Sum_probs=165.1
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHH-HhCCe-------------eeeecCCc------
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETD-YLRSG-------------LYKWDGDA------ 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~-~~g~~-------------~~~~~~~~------ 118 (360)
+.|.+++++++++..+++.... .|.+ +|+.-+.+|......+- ..+.. +..++.+.
T Consensus 104 ~~v~f~~SGseA~e~AiklAr~~tgr~---~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 180 (445)
T PRK08593 104 KRVTFGLSGSDANDGIIKFARAYTGRP---YIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMY 180 (445)
T ss_pred CEEEECCchHHHHHHHHHHHHHhhCCC---eEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccc
Confidence 4799999999999999886532 2332 37777777776643332 22211 12222110
Q ss_pred ------------cccc-------cCCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCc-CC
Q 018172 119 ------------NTFD-------KNNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTP-IT 173 (360)
Q Consensus 119 ------------~~~~-------~~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~-~~ 173 (360)
+.++ ..+++.+|++....+..|.+.+ +.+.++|+++|+++|+||++.+..... ..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~ 260 (445)
T PRK08593 181 EEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWS 260 (445)
T ss_pred cCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHH
Confidence 0010 0245667777776777788744 467789999999999999996421111 10
Q ss_pred --CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 174 --GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 174 --~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
...+..--+.+++|.++ .|+++|++++ ++++++.+.......+.+.|++++.++.+.++.+.+. ..+++.++.-
T Consensus 261 a~~~~gv~pDi~t~gK~l~-~G~p~gav~~-~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~--~l~~~~~~~g 336 (445)
T PRK08593 261 SISHFNITPDLMSFGKSLA-GGMPMSAIVG-RKEIMESLEAPAHLFTTGANPVSCAAALATIDMIEDE--SLLQRSAEKG 336 (445)
T ss_pred HHHhcCCCCCEeeeccccc-CCcccEEEEE-cHHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhc--cHHHHHHHHH
Confidence 11111111458899998 8899999998 8999888854333457778899999898888876543 4444444444
Q ss_pred HHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccC--------Cch---HHHHHHHHhhCeeeeCCCCCC
Q 018172 252 SERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLES--------KED---EDCEKLLRAERIMARGGRRFG 320 (360)
Q Consensus 252 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---~~~~~~l~~~gI~~~pg~~f~ 320 (360)
...++.+.+..++++.+.-..-.|. ++.+.+ ++. ..+...+.++||.+.+..
T Consensus 337 ~~l~~~L~~l~~~~~~v~~vrG~Gl--------------~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~--- 399 (445)
T PRK08593 337 EYARKRFDQWVSKYNFVGDVRGYGL--------------SIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVA--- 399 (445)
T ss_pred HHHHHHHHHHHhcCCcEEEEeccce--------------EEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccC---
Confidence 4444444443344442221221222 222221 121 456777788999987631
Q ss_pred CCCCeEEEEecC--ChHHHHHHHHHHHHHHhchhc
Q 018172 321 ADAKYARVSMLS--REEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 321 ~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~~ 353 (360)
.+.+|++... ++++++++++++.+++.+...
T Consensus 400 --~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 400 --GNVLRFQPPLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred --CCEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 3578987644 999999999999999976543
No 288
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.57 E-value=1.2e-12 Score=125.49 Aligned_cols=258 Identities=13% Similarity=0.025 Sum_probs=157.1
Q ss_pred CChHHHHHHHHHhhcCCCCCCCceEEEeCC---CCCCcHHHH---HHhCCe----eeeecCC-------cccccc---CC
Q 018172 66 TGSTQLYQAALYALSSPGGPEPISVVSAAP---YYSQYPAET---DYLRSG----LYKWDGD-------ANTFDK---NN 125 (360)
Q Consensus 66 ~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p---~~~~~~~~~---~~~g~~----~~~~~~~-------~~~~~~---~~ 125 (360)
.+++.++..++.+|+++||+ |+..+. .|....... +..+.. +..+..+ .+.+.. ..
T Consensus 107 ~SG~~AN~av~~aL~~pgD~----Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~ 182 (475)
T PLN03226 107 LSGSPANFAVYTALLQPHDR----IMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLF 182 (475)
T ss_pred CchHHHHHHHHHHhCCCCCE----EEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhc
Confidence 66788999999999999998 887442 233222211 111121 1133222 222222 24
Q ss_pred CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcC--C-CCCCccEEEecccccc-CCCCceEEEEe
Q 018172 126 GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPI--T-GAADHDIMLFTLSKCT-GHAGSRIGWAL 200 (360)
Q Consensus 126 ~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~--~-~~~~~~i~~~S~sK~~-~~~G~r~G~~~ 200 (360)
++++|++. .++ +|...+ +.+.++|+++|+++++|++|..+..... . .....+++++|++|++ |+.| |+++
T Consensus 183 ~pklIv~~-~S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~GP~G---g~I~ 257 (475)
T PLN03226 183 RPKLIIAG-ASA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLRGPRG---GMIF 257 (475)
T ss_pred CCeEEEEe-cCc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCcccccCCCc---eEEE
Confidence 56776653 343 566655 6778899999999999999985432111 0 0125789999999998 6555 8888
Q ss_pred ecCHHHH-----------HH---HHHHHhh-ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhc
Q 018172 201 VKDTEVA-----------RK---MTRFIEL-GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQS 265 (360)
Q Consensus 201 ~~~~~~~-----------~~---l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 265 (360)
+ +++.. +. +...... ...+++.....++.++++.+.. ...++.++++.++.+++.+.|.+.
T Consensus 258 ~-~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~---~~~~~~~~~~~~na~~L~~~L~~~ 333 (475)
T PLN03226 258 F-RKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMT---PEFKAYQKQVKANAAALANRLMSK 333 (475)
T ss_pred E-chhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhC---cCHHHHHHHHHHHHHHHHHHHHhC
Confidence 7 55433 22 2211111 1223334444444456765543 345677889999999999999886
Q ss_pred CCcccCCCCCcccccccccCCCCCCcccccCC----chHHHHHHHHhhCeeeeCCCCCC----CCCCeEEEEe------c
Q 018172 266 GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK----EDEDCEKLLRAERIMARGGRRFG----ADAKYARVSM------L 331 (360)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gI~~~pg~~f~----~~~~~~R~s~------~ 331 (360)
++.+..+. .....+++++. +...+.+.|.+.||.+..+...+ ..+..+|++. .
T Consensus 334 -G~~l~~~~------------t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g 400 (475)
T PLN03226 334 -GYKLVTGG------------TDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRG 400 (475)
T ss_pred -CCEEEcCC------------CCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCC
Confidence 45543321 01123455552 22778899999999987653221 1345689843 2
Q ss_pred CChHHHHHHHHHHHHHHh
Q 018172 332 SREEIFNIFLERLSAIQG 349 (360)
Q Consensus 332 ~~~e~~~~~~~~l~~~~~ 349 (360)
.++++++++.+.|.+++.
T Consensus 401 ~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 401 LVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 278999999999999997
No 289
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.57 E-value=4.1e-13 Score=131.99 Aligned_cols=318 Identities=13% Similarity=0.058 Sum_probs=182.1
Q ss_pred hHHHHHHhcCCce-e-eecCCcccccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc
Q 018172 3 FEAFWRKLGDKCT-M-VISGSDLMSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS 80 (360)
Q Consensus 3 ~~~~~~~~~~~~~-~-~~~~~~~~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~ 80 (360)
|-+||.+..-+.+ . ++++.+.+ +. +.|. ..+.++.+|+.+|. .+..++++|+|.++..++.+++
T Consensus 167 f~~f~Gen~~r~Dlt~ev~~LddL--l~-~~G~----i~eAe~~AA~~fgA-------d~tyfvvNGTS~~n~av~~a~~ 232 (714)
T PRK15400 167 FYDFFGPNTMKSDISISVSELGSL--LD-HSGP----HKEAEEYIARVFNA-------DRSYMVTNGTSTANKIVGMYSA 232 (714)
T ss_pred HHHHhhhhhhhhhccccccCCCCC--CC-CChH----HHHHHHHHHHHhCC-------CcEEEEeCchHHHHHHHHHHhc
Confidence 3455544322222 2 35555544 23 3444 49999999999995 4589999999999999999999
Q ss_pred CCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCCcccc------c-----c---------CCCee---EEEEcCCCC
Q 018172 81 SPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDANTF------D-----K---------NNGAY---IEVVNSPNN 137 (360)
Q Consensus 81 ~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~------~-----~---------~~~~~---~i~~~~p~N 137 (360)
.+||. |+++..||.+..+.+.+.|++++.+....+.+ . . .++.+ .+++++|+
T Consensus 233 ~~Gd~----VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT- 307 (714)
T PRK15400 233 PAGST----VLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST- 307 (714)
T ss_pred CCCCE----EEeecccHHHHHHHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-
Confidence 99998 99999999999999999999999876442211 1 1 23334 78999995
Q ss_pred CCcccch-HHHHHHhhhcCcEEEEeecccC-----CCCCc---CC-CCC--CccEEEeccccccCCCCceEE-EEeecCH
Q 018172 138 PDGTIRE-AVLAKVNRSAEGKLIHDLAYYW-----PQYTP---IT-GAA--DHDIMLFTLSKCTGHAGSRIG-WALVKDT 204 (360)
Q Consensus 138 PtG~~~~-~~~~~~~~~~~~~li~D~ay~~-----~~~~~---~~-~~~--~~~i~~~S~sK~~~~~G~r~G-~~~~~~~ 204 (360)
.-|.+++ +.+.+.+..++ +++||||+. +.+++ +. +.. +.++++.|.||.++ ++..+ ++.....
T Consensus 308 YdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~--alTQaS~LHvkg~ 383 (714)
T PRK15400 308 YDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGD 383 (714)
T ss_pred CccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCcChhhcCCCCCCceEEEEchhhccc--chhHHhHHHHcCC
Confidence 6999998 55666665465 789999983 11111 11 111 33489999999875 44333 3333111
Q ss_pred HHHHHHHHHHhh-ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC------cccCCCCC--
Q 018172 205 EVARKMTRFIEL-GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGV------FGLPEYPL-- 275 (360)
Q Consensus 205 ~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~~~~~-- 275 (360)
--.+++...... .+.+++-+....+..+...+.. ..-++..+...++...+++.|.++++ +.+..++.
T Consensus 384 vd~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~---~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~ 460 (714)
T PRK15400 384 VNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKG---NAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHID 460 (714)
T ss_pred CCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcc
Confidence 001233332222 2223332222222222222211 23344445555555666666666643 22222110
Q ss_pred -----------cccccccc---cCCCCCCcccccCCc-------------hHHHHHHHHhhCeeeeCCCCCCCCCCeEEE
Q 018172 276 -----------EYCNFTGK---FTNSHPGFAWLESKE-------------DEDCEKLLRAERIMARGGRRFGADAKYARV 328 (360)
Q Consensus 276 -----------~~~~~~~~---~~~~~~~~~~~~~~~-------------~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~ 328 (360)
.+..|.+. ...-++.=+.+.+++ +..+.+.|+++||.+.-...+.. -+=+
T Consensus 461 ~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~i---Lfl~ 537 (714)
T PRK15400 461 TTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNL---LFLF 537 (714)
T ss_pred cchhcccCccccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeE---EEEe
Confidence 00000000 000011112222222 15678889999999875332221 2444
Q ss_pred EecCChHHHHHHHHHHHHHHh
Q 018172 329 SMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 329 s~~~~~e~~~~~~~~l~~~~~ 349 (360)
+++.+++++++++++|.++-+
T Consensus 538 s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 538 SIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred CCCCCHHHHHHHHHHHHHHHH
Confidence 555599999999999998844
No 290
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.57 E-value=1.5e-12 Score=123.73 Aligned_cols=283 Identities=14% Similarity=0.103 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCC------cHHHHHHhCCeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQ------YPAETDYLRSGLY 112 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~------~~~~~~~~g~~~~ 112 (360)
..+++.+++++|. ++ .+++++++.++..++.. +.+||+ |++++..|.. +...++..|++++
T Consensus 125 ~~le~~lA~l~ga-------e~-alvv~sg~aAi~l~l~~-l~~Gde----VIvs~~e~v~~ggs~~i~~~~~~~G~~~~ 191 (454)
T TIGR00474 125 SHVEGLLCELTGA-------ED-ALVVNNNAAAVLLALNT-LAKGKE----VIVSRGELVEIGGSFRIPDVMEQSGAKLV 191 (454)
T ss_pred HHHHHHHHHHhCC-------Cc-EEEECCHHHHHHHHHHH-hCCcCE----EEECCChhhhhcchhhHHHHHHHcCCEEE
Confidence 7889999999985 33 45566677888888855 578988 9999876432 2345677899999
Q ss_pred eecCCc----ccccc--CCCeeEEEEcCCCCCC--cc--cch-HHHHHHhhhcCcEEEEeecccC---------CCCCcC
Q 018172 113 KWDGDA----NTFDK--NNGAYIEVVNSPNNPD--GT--IRE-AVLAKVNRSAEGKLIHDLAYYW---------PQYTPI 172 (360)
Q Consensus 113 ~~~~~~----~~~~~--~~~~~~i~~~~p~NPt--G~--~~~-~~~~~~~~~~~~~li~D~ay~~---------~~~~~~ 172 (360)
.++.+. +.+.. +++|++|++.+++||+ |. ..+ +++.++|+++|+++++|.+.+. +..+.+
T Consensus 192 ~v~~~~~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~ 271 (454)
T TIGR00474 192 EVGTTNRTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTV 271 (454)
T ss_pred EeCCCCCCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCccc
Confidence 887532 22222 5789999999999995 64 455 7788889989999999986321 111111
Q ss_pred --CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCch--------h
Q 018172 173 --TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYP--------N 242 (360)
Q Consensus 173 --~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~ 242 (360)
....+.+++++|.+|.++-| ..|++++ ..++++.+++...............+..+.+....+..+ +
T Consensus 272 ~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g-~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~ 348 (454)
T TIGR00474 272 QEVIAAGVDLVTFSGDKLLGGP--QAGIIVG-KKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLR 348 (454)
T ss_pred ccHhHcCCCEEEecCccccCCC--eEEEEEE-CHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHH
Confidence 12457789999999988634 4798988 678887765433222233333333333333322111100 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc--CCc--ccCCCC---CcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeee
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQS--GVF--GLPEYP---LEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMA 313 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~--~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~ 313 (360)
.+....++.+++.+.+.+.|.+. +++ .+.... |+. ++.+...++. -+.++..+ ...+.+.|++....+
T Consensus 349 ~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg-~~p~~~l~~~--~v~~~~~~~~~~~l~~~lr~~~~~i 425 (454)
T TIGR00474 349 MLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGG-SLPDERLPSY--AVTLTPDGLSAEKLEARLRELPPPI 425 (454)
T ss_pred HhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCC-CCcCCCCCeE--EEEEecCCCCHHHHHHHHhcCCCCE
Confidence 22233345666777777777664 222 111111 111 1111111111 12233222 278888998876333
Q ss_pred eCCCCCCCCCCeEEEEecC-ChHHHHHHHHHH
Q 018172 314 RGGRRFGADAKYARVSMLS-REEIFNIFLERL 344 (360)
Q Consensus 314 ~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l 344 (360)
... ..++.+-+-+-. .++|++.+++++
T Consensus 426 i~r----~~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 426 IGR----IEDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred EEE----EECCEEEEEeCcCCHHHHHHHHHHh
Confidence 221 246677787755 788888888775
No 291
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.56 E-value=3.8e-12 Score=119.07 Aligned_cols=291 Identities=10% Similarity=-0.021 Sum_probs=186.7
Q ss_pred ccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH-HH
Q 018172 27 LSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE-TD 105 (360)
Q Consensus 27 y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~-~~ 105 (360)
|.....+ .+|++.+++++|. + .++.|+++|.++++++...+++||. | +..+|...... +.
T Consensus 74 Yagd~s~-----~~LE~~vAe~lG~-------e-~aV~v~sGTaAl~ll~~l~v~pGd~----V--p~n~~f~Tt~ahI~ 134 (460)
T PRK13237 74 YAGSRNF-----YHLEETVQEYYGF-------K-HVVPTHQGRGAENLLSRIAIKPGQY----V--PGNMYFTTTRYHQE 134 (460)
T ss_pred hcCCCcH-----HHHHHHHHHHHCC-------C-eEEEeCCHHHHHHHHHHhCCCCcCE----E--CCccchHhhHHHHH
Confidence 6655555 8999999999995 4 6889989999999887777889985 4 44444444433 66
Q ss_pred HhCCeeeeec----------------CCcccccc------CCCeeEEEEcCCCCCC-cccch----HHHHHHhhhcCcEE
Q 018172 106 YLRSGLYKWD----------------GDANTFDK------NNGAYIEVVNSPNNPD-GTIRE----AVLAKVNRSAEGKL 158 (360)
Q Consensus 106 ~~g~~~~~~~----------------~~~~~~~~------~~~~~~i~~~~p~NPt-G~~~~----~~~~~~~~~~~~~l 158 (360)
..|+.++.+. +|.+.+.. .+++.++.+.+++|.. |...| +.+.++|+++|+.+
T Consensus 135 ~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~V 214 (460)
T PRK13237 135 LNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKV 214 (460)
T ss_pred hCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEE
Confidence 6787665442 12111111 1245567888888988 56664 56778899999999
Q ss_pred EEeecccCCCC-------CcCCC----------CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhc----
Q 018172 159 IHDLAYYWPQY-------TPITG----------AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELG---- 217 (360)
Q Consensus 159 i~D~ay~~~~~-------~~~~~----------~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~---- 217 (360)
++|.++..+.. ....+ ....+.+++|++|.++.+- .|++++.++++.+.++...-..
T Consensus 215 i~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~--GG~i~t~D~eL~~~~r~~~~~~eG~~ 292 (460)
T PRK13237 215 FFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI--GGFLAMNDEELFDEAKELVVVYEGMP 292 (460)
T ss_pred EEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC--ceEEEECCHHHHHHHHHhccccCCCc
Confidence 99999875421 11111 1245788999999987542 4899998999999998774221
Q ss_pred cc-cCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccC
Q 018172 218 SI-GVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLES 296 (360)
Q Consensus 218 ~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (360)
++ +.+.-...+++..+....+. ...+......++|.+.|.+. ++.+..|.|+.+.|++... +...+
T Consensus 293 tygg~~grd~~alAvgl~E~~~~------~y~~~ri~~~~~l~~~L~~~-Gvpv~~p~ggH~v~vda~~------~lph~ 359 (460)
T PRK13237 293 SYGGMAGRDMEAMAIGIEESVQY------EYIEHRVGQVRYLGEKLLAA-GVPIVEPVGGHAVFLDARR------FLPHL 359 (460)
T ss_pred CCCChhhhHHHHHHhHHHhhchH------HHHHHHHHHHHHHHHHHHHC-CCceecCCCceEEEEEhHH------hCCCC
Confidence 11 22232344444444422221 33333334557888888887 5667778888766553221 11222
Q ss_pred -----CchHHHHHHHHhhCeeee-CCCC-CCC----------CCCeEEEEecC---ChHHHHHHHHHHHHHHhch
Q 018172 297 -----KEDEDCEKLLRAERIMAR-GGRR-FGA----------DAKYARVSMLS---REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 297 -----~~~~~~~~~l~~~gI~~~-pg~~-f~~----------~~~~~R~s~~~---~~e~~~~~~~~l~~~~~~~ 351 (360)
|....+..+-.+.||--. -|+. ++. .-..+|+.+-. +.+.++...+++..+.++.
T Consensus 360 ~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 434 (460)
T PRK13237 360 PQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHR 434 (460)
T ss_pred CcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhH
Confidence 333667777788888643 2221 121 12469999855 8899999999999998764
No 292
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.55 E-value=2.8e-12 Score=126.21 Aligned_cols=303 Identities=11% Similarity=0.021 Sum_probs=174.3
Q ss_pred eecCCcccccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCC
Q 018172 17 VISGSDLMSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPY 96 (360)
Q Consensus 17 ~~~~~~~~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~ 96 (360)
+.++.+.+ . +..|. ..+.++.+|+.+|. ....++++|+|.++..++.+++.+||. |+++..|
T Consensus 183 ev~~LddL--l-~~~G~----i~eAe~~aA~~fgA-------d~tyfvvNGTS~~n~av~~a~~~~Gd~----VLvdRN~ 244 (713)
T PRK15399 183 SVTELGSL--L-DHTGP----HLEAEEYIARTFGA-------EQSYIVTNGTSTSNKIVGMYAAPAGST----LLIDRNC 244 (713)
T ss_pred cccCCCCC--C-CCChH----HHHHHHHHHHHhCC-------CcEEEEeCChHHHHHHHHHHhcCCCCE----EEeeccc
Confidence 35555444 2 33444 48999999999995 458999999999999999999999998 9999999
Q ss_pred CCCcHHHHHHhCCeeeeecCCcccc--------------------ccCC---CeeEEEEcCCCCCCcccch-HHHHHHhh
Q 018172 97 YSQYPAETDYLRSGLYKWDGDANTF--------------------DKNN---GAYIEVVNSPNNPDGTIRE-AVLAKVNR 152 (360)
Q Consensus 97 ~~~~~~~~~~~g~~~~~~~~~~~~~--------------------~~~~---~~~~i~~~~p~NPtG~~~~-~~~~~~~~ 152 (360)
|.+..+.+.+.|++++.+....+.+ ...+ +++++++++|+ .-|.+++ +.+.+.+
T Consensus 245 HKSv~~aLilsga~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd~~~I~~~~- 322 (713)
T PRK15399 245 HKSLAHLLMMSDVVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYNTDWIKQTL- 322 (713)
T ss_pred HHHHHHHHHHcCCeeEEecccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeCHHHHHHHh-
Confidence 9999999999999999876442211 1122 33689999996 6999998 5555555
Q ss_pred hcCcEE-EEeecccC-----CCCCc---CCCCCCcc---EEEeccccccCCCCceEE-EEeecCHHHHHHHHHHHhhc-c
Q 018172 153 SAEGKL-IHDLAYYW-----PQYTP---ITGAADHD---IMLFTLSKCTGHAGSRIG-WALVKDTEVARKMTRFIELG-S 218 (360)
Q Consensus 153 ~~~~~l-i~D~ay~~-----~~~~~---~~~~~~~~---i~~~S~sK~~~~~G~r~G-~~~~~~~~~~~~l~~~~~~~-~ 218 (360)
|+.+ ++||||+. +.+++ +....+.+ +++.|.||.++ ++..+ ++.....--.+++....... +
T Consensus 323 --g~~~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~--alTQaS~iHvk~~vd~~~~n~a~~m~~S 398 (713)
T PRK15399 323 --DVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLA--AFSQASLIHIKGEYDEETFNEAFMMHTS 398 (713)
T ss_pred --CCCEEEEeccchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhcccc--ccchheeeeecCCCCHHHHHHHHHHHcC
Confidence 4545 69999983 11121 11111223 44999999875 44444 55553211113343333222 2
Q ss_pred ccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC------cccCCCC-------------Ccccc
Q 018172 219 IGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGV------FGLPEYP-------------LEYCN 279 (360)
Q Consensus 219 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~~~~-------------~~~~~ 279 (360)
.+++-+....+..+...+.. ..-++..+...++...+++.+.++.. +.+..++ ..+..
T Consensus 399 TSPsY~LmASLD~a~~~m~~---~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whg 475 (713)
T PRK15399 399 TSPSYPIVASVETAAAMLRG---NPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHG 475 (713)
T ss_pred CCcHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCccccc
Confidence 23332222222222222211 12333444445555555555555432 2222211 00000
Q ss_pred ccc---ccCCCCCCcccccCC-------------chHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHH
Q 018172 280 FTG---KFTNSHPGFAWLESK-------------EDEDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLER 343 (360)
Q Consensus 280 ~~~---~~~~~~~~~~~~~~~-------------~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~ 343 (360)
|.+ ....-++.=+.+.++ .+..+.+.|+++||.+.-...+.. -+=+|++.+++++++++++
T Consensus 476 f~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~v---L~l~s~g~t~~~~~~L~~a 552 (713)
T PRK15399 476 FKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNL---LFLFSIGIDKTKAMGLLRG 552 (713)
T ss_pred ccccccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecCCCeE---EEEeCCCCCHHHHHHHHHH
Confidence 000 000001111222222 116788889999999875332221 3444555599999999999
Q ss_pred HHHHHh
Q 018172 344 LSAIQG 349 (360)
Q Consensus 344 l~~~~~ 349 (360)
|.++-+
T Consensus 553 L~~f~~ 558 (713)
T PRK15399 553 LTEFKR 558 (713)
T ss_pred HHHHHH
Confidence 998854
No 293
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.55 E-value=2.3e-12 Score=123.27 Aligned_cols=259 Identities=13% Similarity=0.103 Sum_probs=156.6
Q ss_pred EEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHHHh-CC------------eeeeecCCc---------
Q 018172 62 IVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETDYL-RS------------GLYKWDGDA--------- 118 (360)
Q Consensus 62 i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~--------- 118 (360)
++++++++++...+++.... .|. .+|+.-..+|......+... |. .+..++...
T Consensus 105 ~f~~~sGsEA~e~AlklAr~~tgr---~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (442)
T TIGR00709 105 QFPGPSGADAVEAAIKLAKTYTGR---TNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIG 181 (442)
T ss_pred EEeCCCHHHHHHHHHHHHHHhcCC---CeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCC
Confidence 45568899999999887642 232 24888888888776444432 21 111121110
Q ss_pred ------------c-ccc---c-CCCeeEEEEcCCCCCCccc-ch----HHHHHHhhhcCcEEEEeecccCCCCCc-CC--
Q 018172 119 ------------N-TFD---K-NNGAYIEVVNSPNNPDGTI-RE----AVLAKVNRSAEGKLIHDLAYYWPQYTP-IT-- 173 (360)
Q Consensus 119 ------------~-~~~---~-~~~~~~i~~~~p~NPtG~~-~~----~~~~~~~~~~~~~li~D~ay~~~~~~~-~~-- 173 (360)
+ .+. . ..+..++++....+..|.+ .+ +.+.++|+++|+++|.||++.+..... ..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~ 261 (442)
T TIGR00709 182 GEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAF 261 (442)
T ss_pred chhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHH
Confidence 0 010 0 1345666665555555655 44 467789999999999999998532211 11
Q ss_pred CC--CCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 174 GA--ADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 174 ~~--~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
.. ...++++ ++|.++ .|+++|++++ +++ .+.+.......+++.|++++.++.+.|+.+.+. . ..+..
T Consensus 262 ~~~gv~PDiv~--~gK~l~-~G~Pigav~~-~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~--~----l~~~~ 330 (442)
T TIGR00709 262 EHAGIEPDFVV--MSKAVG-GGLPLAVLLI-APE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDD--N----LAQNA 330 (442)
T ss_pred HHcCCCCcEEE--Eccccc-CCcccEEEEE-chH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhc--C----HHHHH
Confidence 11 1223443 899999 5999999999 666 454432233467889999999999999865432 2 33344
Q ss_pred HHHHHHHHHHHHh----cCCcccCCCCCcccccccccCCCCCCcccccCC--------------c---hHHHHHHHHhhC
Q 018172 252 SERWNMLRQVIRQ----SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--------------E---DEDCEKLLRAER 310 (360)
Q Consensus 252 ~~~~~~l~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~---~~~~~~~l~~~g 310 (360)
+++.+++.+.|++ ++.+.-+. +.+.++.+.+. + ...+...+.++|
T Consensus 331 ~~~g~~l~~~L~~l~~~~~~v~~vr--------------G~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 396 (442)
T TIGR00709 331 QERGERITSFLDDMIKEHPCIGNVR--------------GRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENG 396 (442)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeeee--------------ccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCC
Confidence 5555555555544 33222111 22223222221 0 145667778899
Q ss_pred eeeeCCCCCCCCCCeEEEEec--CChHHHHHHHHHHHHHHhch
Q 018172 311 IMARGGRRFGADAKYARVSML--SREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 311 I~~~pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~~ 351 (360)
|.+.+... ..+.+|+... .++++++++++++.+.+.+.
T Consensus 397 vl~~~~~~---~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 397 LLLETGGR---EGEVFRLLCPITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred eEEeecCC---CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99876322 2458888654 39999999999999999764
No 294
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.54 E-value=1.5e-12 Score=116.01 Aligned_cols=276 Identities=17% Similarity=0.135 Sum_probs=174.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH--HHHhC--Ceeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE--TDYLR--SGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~--~~~~g--~~~~~~ 114 (360)
..+++.+++.++ . ..+++++++|+++.+.+...++||+. ||+..-.|-..... ++.++ .+....
T Consensus 38 ~~~e~~~ae~~g-------~-~a~~Fv~sGT~aN~lal~~~~~~~~~----vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~ 105 (342)
T COG2008 38 NALEQRIAELFG-------K-EAALFVPSGTQANQLALAAHCQPGES----VICHETAHIYTDECGAPEFFGGGQKLPIV 105 (342)
T ss_pred HHHHHHHHHHhC-------C-ceEEEecCccHHHHHHHHHhcCCCCe----EEEeccccceecccCcHHHHcCCceeccC
Confidence 788888888888 4 47999999999999999999999998 99998887766532 44443 332222
Q ss_pred c-----CCcccccc----C----CCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCC---CC-CcCC
Q 018172 115 D-----GDANTFDK----N----NGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWP---QY-TPIT 173 (360)
Q Consensus 115 ~-----~~~~~~~~----~----~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~---~~-~~~~ 173 (360)
+ ++++.+.. + ..+.++++.+.+|--|.++| +.+.++|+++++.|..|-+-.+. .. ++..
T Consensus 106 ~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~ 185 (342)
T COG2008 106 PGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALK 185 (342)
T ss_pred CCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHH
Confidence 2 11111111 1 23445555444447899999 24557899999999999875531 11 2222
Q ss_pred -CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHH
Q 018172 174 -GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMS 252 (360)
Q Consensus 174 -~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 252 (360)
-....+.+..++||..+.|+ |.|+..+.++++.++..+...+...+.....++.. +-.+.++ ......+.-.
T Consensus 186 ~~~~~~D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~-~~~l~~~---~~~~~~~Han 258 (342)
T COG2008 186 TIKSYVDSVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQG-LYALEDD---VWRLAADHAN 258 (342)
T ss_pred HHHhhCCEEEEecccCCccee---eeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHH-HHHHhcc---HHHHHHHHHH
Confidence 24567888999999887665 88888799999999877765444444333333332 2222232 2222233334
Q ss_pred HHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC
Q 018172 253 ERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYARVSMLS 332 (360)
Q Consensus 253 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~ 332 (360)
+...+|.+.|...+++.+..| +.+|.+++.+++. ..+.|+..|+...-|..-+.....+||..+.
T Consensus 259 ~mA~~La~~~~~~~G~~~~~~-------------~~tN~vf~~l~~~--~i~~l~~~~~~~~~~~~~~~~~~~vRfvts~ 323 (342)
T COG2008 259 AMAARLAEGLEAKPGVKLAFP-------------VETNMVFVRLPES--AIEALRLAGALFYRGVLIGAHGEIVRFVTSW 323 (342)
T ss_pred HHHHHHHHhhhhcCCceeccC-------------CcccEEEEECChH--HHHHHHhhchhheeeeeccCCCceEEEEeec
Confidence 445677788887766665443 5667888998864 1144444444433322111111368996544
Q ss_pred --ChHHHHHHHHHHHHHH
Q 018172 333 --REEIFNIFLERLSAIQ 348 (360)
Q Consensus 333 --~~e~~~~~~~~l~~~~ 348 (360)
++|++++++..+++++
T Consensus 324 a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 324 ATSEEDVDELVAAIKALL 341 (342)
T ss_pred cCCHHHHHHHHHHHHHhh
Confidence 8999999999998875
No 295
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.54 E-value=1.9e-12 Score=123.07 Aligned_cols=264 Identities=13% Similarity=0.085 Sum_probs=163.7
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHHhCCe-------------eeeecC-Cccc-
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDYLRSG-------------LYKWDG-DANT- 120 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~-~~~~- 120 (360)
+.++++++++|++..+++.... .|.. +|+.....|......+-....+ +..++. |.+.
T Consensus 135 ~~v~f~~SGsEA~e~AlklAr~~t~~~gr~---~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~ 211 (442)
T TIGR03372 135 KYSFFCNSGTESVEAALKLAKAYQSPRGKF---TFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAM 211 (442)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHhhcCCc---EEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHH
Confidence 4689999999999999886632 2332 4888887777765433332111 112221 1111
Q ss_pred ---ccc----CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCcCC--CCC--CccEEEe
Q 018172 121 ---FDK----NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTPIT--GAA--DHDIMLF 183 (360)
Q Consensus 121 ---~~~----~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~~~--~~~--~~~i~~~ 183 (360)
++. ..+..+|++......-|...+ +.+.++|+++|+++|.||++.+. ...... ... ..++ .
T Consensus 212 ~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDi--v 289 (442)
T TIGR03372 212 LKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDI--L 289 (442)
T ss_pred HHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCe--e
Confidence 110 134555666554555677765 46778999999999999999642 111111 111 2233 3
Q ss_pred ccccccCCCC-ceEEEEeecCHHHHHHHHH--HHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHH
Q 018172 184 TLSKCTGHAG-SRIGWALVKDTEVARKMTR--FIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQ 260 (360)
Q Consensus 184 S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 260 (360)
+++|.+| .| +.+|.+++ .+++.+.+.. .....+++.|+.+..++.+.|+.+.+. ...++.++.-...++.|.+
T Consensus 290 t~gK~lg-~G~~Pigavv~-~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~--~l~~~~~~~G~~l~~~L~~ 365 (442)
T TIGR03372 290 CLAKALG-GGVMPIGATIA-TEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEK--NLPAQAAIKGDFLLDGFQQ 365 (442)
T ss_pred eehhhhc-CCcccceEEEe-cHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHH
Confidence 5899998 78 68999998 7888888732 233467778999999999989876543 4444444444444444444
Q ss_pred HHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC--ChH
Q 018172 261 VIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARVSMLS--REE 335 (360)
Q Consensus 261 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~--~~e 335 (360)
...+++.. +. .+++.+.++.+.+.+. ..+.+.|.++||++.+.. ...+.+||.... +++
T Consensus 366 l~~~~~~~-i~------------~vRG~Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~~---~~~~~lr~~Ppl~~t~~ 429 (442)
T TIGR03372 366 LAAEYPDL-II------------EARGKGLLMAIEFRDNEIGYAFAKELFQQNILVAGTL---NNAKSIRIEPPLTITIE 429 (442)
T ss_pred HHHhCCCc-eE------------EEecceEEEEEEeCChHHHHHHHHHHHHCCcEEeecC---CCCCEEEEECCcccCHH
Confidence 33334311 00 1234455666666543 567777888999987531 124689987643 999
Q ss_pred HHHHHHHHHHHHH
Q 018172 336 IFNIFLERLSAIQ 348 (360)
Q Consensus 336 ~~~~~~~~l~~~~ 348 (360)
+++++++++.+.+
T Consensus 430 ~id~~~~~l~~~~ 442 (442)
T TIGR03372 430 QCALVIKAAKDAL 442 (442)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998864
No 296
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.53 E-value=2.6e-12 Score=122.43 Aligned_cols=262 Identities=14% Similarity=0.066 Sum_probs=157.8
Q ss_pred cEEE-cCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHHHh-CC------------eeeeecCC--------
Q 018172 61 HIVI-GTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETDYL-RS------------GLYKWDGD-------- 117 (360)
Q Consensus 61 ~i~~-t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~-------- 117 (360)
.+.+ ++++++++..+++.... +|.. +|+.-..+|......+-.. |- .+..+|.+
T Consensus 104 ~~~f~~~sGseA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 180 (425)
T PRK09264 104 KVQFTGPTGTNAVEAALKLARKVTGRT---NIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVD 180 (425)
T ss_pred eEEEeCCCHHHHHHHHHHHHHHhcCCC---eEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchh
Confidence 4656 57999999999887642 2322 4887777777765432222 10 12223221
Q ss_pred -cccccc-------C-CCeeEEEEcCCCCCCcccc-h----HHHHHHhhhcCcEEEEeecccCCCC-CcC-C---CCCCc
Q 018172 118 -ANTFDK-------N-NGAYIEVVNSPNNPDGTIR-E----AVLAKVNRSAEGKLIHDLAYYWPQY-TPI-T---GAADH 178 (360)
Q Consensus 118 -~~~~~~-------~-~~~~~i~~~~p~NPtG~~~-~----~~~~~~~~~~~~~li~D~ay~~~~~-~~~-~---~~~~~ 178 (360)
.+.++. . ++..+|++.......|.+. + +.+.++|++||+++|+||++.+... ... . .....
T Consensus 181 ~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~P 260 (425)
T PRK09264 181 TLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITP 260 (425)
T ss_pred HHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCC
Confidence 111111 1 2345666655555677654 3 4677899999999999999974211 000 0 11122
Q ss_pred cEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhc-ccCCCchhHHHHHHHHHHHHHHH
Q 018172 179 DIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILG-IVSDDYPNFFEYGRRLMSERWNM 257 (360)
Q Consensus 179 ~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~ 257 (360)
+ +.+++|.++..|+++|++++ ++++ +.+.......+++.|+++..++.++++ .+.+ ++..+.++++.++
T Consensus 261 D--i~t~~K~l~~~G~pigav~~-~~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~------~~l~~~~~~~g~~ 330 (425)
T PRK09264 261 D--IVTLSKSISGYGLPMALVLI-KPEL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWSD------DAFEKEVKAKGEL 330 (425)
T ss_pred C--EEEeccccCCCccceEEEEE-chhh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHhh------hHHHHHHHHHHHH
Confidence 3 34778999944999999999 6665 344332234566778888877767773 2222 1344445555555
Q ss_pred HHHHHHhc----CCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEe
Q 018172 258 LRQVIRQS----GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARVSM 330 (360)
Q Consensus 258 l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~ 330 (360)
+.+.|+++ +.+ .. .+++.+.++++.+++. ..+...+.++||.+.+...+ ...+||+.
T Consensus 331 l~~~l~~l~~~~~~~-~~------------~vrg~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~~---~~~lr~~p 394 (425)
T PRK09264 331 VRERLEEIAAKYPGL-GA------------EVRGRGMMQGIDFGDGELAGKIAAEAFENGLIIETSGPE---DEVVKLLP 394 (425)
T ss_pred HHHHHHHHHHhCCCc-ee------------cceecccEEEEEecChHHHHHHHHHHHHCCCEEeccCCC---CCEEEEeC
Confidence 55555443 211 11 1123445678877654 56778888999999875333 35788876
Q ss_pred c--CChHHHHHHHHHHHHHHhch
Q 018172 331 L--SREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 331 ~--~~~e~~~~~~~~l~~~~~~~ 351 (360)
. .+++++++++++|.+++.+.
T Consensus 395 ~l~~t~~ei~~~~~~l~~~l~~~ 417 (425)
T PRK09264 395 PLTIDEEELEEGLDILEEAVAEV 417 (425)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Confidence 4 48999999999999998764
No 297
>PLN02452 phosphoserine transaminase
Probab=99.53 E-value=1.2e-12 Score=121.46 Aligned_cols=280 Identities=10% Similarity=0.013 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHhhcCCCCCC-CCc-EEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc--HHHHHHhCCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSD-GRH-IVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY--PAETDYLRSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~-~~~-i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~--~~~~~~~g~~~~~~ 114 (360)
.+.++.+.++++. + ..+ +++..|+|.++..+...|+.+|++ +++......+- ...++.+|...+..
T Consensus 55 ~~~~~~L~~l~~~------p~~y~v~~l~Gsgt~~~ea~~~nl~~~~~~----~l~~~~G~fg~r~~~~a~~~g~~~~~~ 124 (365)
T PLN02452 55 QKAEADLRELLDI------PDNYEVLFLQGGASTQFAAIPLNLCKPGDK----ADFVVTGSWSKKAAKEAKKYCKTNVIA 124 (365)
T ss_pred HHHHHHHHHHhCC------CCCceEEEEeCccHHHHHHHHHhcCCCCCe----EEEEECCHHHHHHHHHHHHhCCCcEEE
Confidence 6666667777664 2 224 455699999999999999988887 66555444332 45677777644433
Q ss_pred c---------CCccccccCCCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecc
Q 018172 115 D---------GDANTFDKNNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTL 185 (360)
Q Consensus 115 ~---------~~~~~~~~~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~ 185 (360)
. .+.+.+..+++.+.|.+++-.-.||+.+.+. .+++ ++++|+|.+...++.+...+..+. ...|.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~hnETstGv~~~~~-~~i~---~~~lvVDa~Ss~g~~pidv~~~~v--~~~sa 198 (365)
T PLN02452 125 SGKDEKYTKIPSVSEWELTPDAKFVHICANETIHGVEFKDY-PDVG---NVPLVADMSSNFLSKPVDVSKYGV--IYAGA 198 (365)
T ss_pred ecCCCCCCCCCChHHcCCCCCCcEEEECCCCCCCcEecCcc-cccC---CCeEEEECCccccCcccCHHHcCE--EEEec
Confidence 1 1223344455667777766555899975531 1222 489999999887665555555554 33699
Q ss_pred ccccCCCCceEEEEeecCHHHHHHHHHH-------H-----hhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHH
Q 018172 186 SKCTGHAGSRIGWALVKDTEVARKMTRF-------I-----ELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSE 253 (360)
Q Consensus 186 sK~~~~~G~r~G~~~~~~~~~~~~l~~~-------~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 253 (360)
.|.+|++| +|+++. .+++++.+... . .....++|....+++.++|+.+.+. .-++.+.++.++
T Consensus 199 qK~lGP~G--l~~v~v-r~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~--gGl~~~~~r~~~ 273 (365)
T PLN02452 199 QKNVGPSG--VTIVII-RKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQ--GGLKAMEKRNIR 273 (365)
T ss_pred ccccCCCC--eEEEEE-cHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHc--cCHHHHHHHHHH
Confidence 99999998 788888 67776554221 0 1112356677777888888876532 368999999999
Q ss_pred HHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEe
Q 018172 254 RWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARVSM 330 (360)
Q Consensus 254 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~ 330 (360)
+.+++++.|++.+++.. .+.. ...++.. .+.+.+++. +.+.+.++++|+...+|+.-- . .+|+|+
T Consensus 274 ~a~~l~~~l~~~~G~y~-~~~~-------~~~rs~~-~vsF~~~~~~~~~~f~~~~~~~g~~~~~G~r~~--g-g~R~s~ 341 (365)
T PLN02452 274 KADLLYDAIDESNGFYV-CPVE-------KSVRSLM-NVPFTLGGSELEAEFVKEAAKAGMVQLKGHRSV--G-GMRASI 341 (365)
T ss_pred HHHHHHHHHHhCCCccc-CCCC-------hHHhCCe-EEEEEcCCchhHHHHHHHHHHCCCcccCCcccc--C-ceEEEC
Confidence 99999999999765511 1110 0001111 234444442 788999999999999987542 2 399998
Q ss_pred cC--ChHHHHHHHHHHHHHHhch
Q 018172 331 LS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 331 ~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
-. +.|+++++++.++++.++.
T Consensus 342 yna~~~~~v~~L~~~m~~f~~~~ 364 (365)
T PLN02452 342 YNAMPLAGVEKLVAFMKDFQAKH 364 (365)
T ss_pred cCCCCHHHHHHHHHHHHHHHHhc
Confidence 55 9999999999999987654
No 298
>PRK06541 hypothetical protein; Provisional
Probab=99.52 E-value=4.3e-12 Score=121.66 Aligned_cols=267 Identities=13% Similarity=0.070 Sum_probs=163.8
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHHh-CCe------------eeeecCCc----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDYL-RSG------------LYKWDGDA---- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~~~---- 118 (360)
+.+++++++++++..+++.... .|...+.+|+.-.-+|......+-.. |.. +..++.+.
T Consensus 113 ~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 192 (460)
T PRK06541 113 NRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRA 192 (460)
T ss_pred CEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccc
Confidence 4899999999999998886642 12111224777777776665433222 211 11121110
Q ss_pred ---------------ccccc-----CCCeeEEEEcCC-CCCCcccch-----HHHHHHhhhcCcEEEEeecccC-CCCCc
Q 018172 119 ---------------NTFDK-----NNGAYIEVVNSP-NNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYW-PQYTP 171 (360)
Q Consensus 119 ---------------~~~~~-----~~~~~~i~~~~p-~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~-~~~~~ 171 (360)
+.++. .++..+.++..| +++.|.+.+ +.+.++|+++|+++|+||++.+ +....
T Consensus 193 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~ 272 (460)
T PRK06541 193 PELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGE 272 (460)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCch
Confidence 01110 123445555555 789998865 3677899999999999999953 22222
Q ss_pred CC--CCC--CccEEEeccccccCCCCc-eEEEEeecCHHHHHHHHHHH----hhccccCChHHHHHHHHHhcccCCCchh
Q 018172 172 IT--GAA--DHDIMLFTLSKCTGHAGS-RIGWALVKDTEVARKMTRFI----ELGSIGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 172 ~~--~~~--~~~i~~~S~sK~~~~~G~-r~G~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
.. ... ..+++ +++|.++ .|+ ++|++++ .+++++.+.... ...+++.|+++..++.+.++.+.+.
T Consensus 273 ~~a~~~~gv~PDiv--t~gK~l~-~G~~pigav~~-~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~--- 345 (460)
T PRK06541 273 MFGCERFGYVPDII--TCAKGIT-SGYSPLGAMIA-SDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFERE--- 345 (460)
T ss_pred hhhhhhcCCCCCEE--Eeccccc-CCccceeEEEE-cHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc---
Confidence 11 111 22333 6899999 887 9999999 788888875321 2246678889988888888755432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC----------c----h---HHHHHH
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK----------E----D---EDCEKL 305 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~----~---~~~~~~ 305 (360)
...+.++++.+++.+.|+++....+.. .+.+.+.++.+.+. + . ..+...
T Consensus 346 ---~~~~~~~~~g~~l~~~L~~l~~~~~v~-----------~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (460)
T PRK06541 346 ---GLLDHVRDNEPAFRATLEKLLDLPIVG-----------DVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPA 411 (460)
T ss_pred ---cHHHHHHHHHHHHHHHHHHhhcCCCeE-----------EEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHH
Confidence 345667777777777777662111100 01122222222221 0 0 245567
Q ss_pred HHhhCeeeeCCCCCCCCCCeEEEEec--CChHHHHHHHHHHHHHHhc
Q 018172 306 LRAERIMARGGRRFGADAKYARVSML--SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 306 l~~~gI~~~pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~ 350 (360)
|.++||.+.+.. . ..+.+||+.. .++++++++++++.+++.+
T Consensus 412 l~~~Gi~~~~~~-~--g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 412 LFEAGLYCRADD-R--GDPVVQLAPPLISGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred HHhCCeEEEecC-C--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 778999998721 1 2468999876 4999999999999999865
No 299
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.51 E-value=6.3e-12 Score=120.34 Aligned_cols=268 Identities=13% Similarity=0.102 Sum_probs=166.0
Q ss_pred CcEEEcCChHHHHHHHHHhhcCC-CCCCCceEEEeCCCCCCcHHHHHHh-CCe------------eeeecC-Ccccccc-
Q 018172 60 RHIVIGTGSTQLYQAALYALSSP-GGPEPISVVSAAPYYSQYPAETDYL-RSG------------LYKWDG-DANTFDK- 123 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~~-gd~~~~~vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~-~~~~~~~- 123 (360)
+.+++++++++++..+++....- |.+.+.+|+....+|......+-.. |-. +..++. |.+.+..
T Consensus 142 ~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 221 (459)
T PRK11522 142 KYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTA 221 (459)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHH
Confidence 47999999999999998876321 1000124787777777765443322 211 111111 1111111
Q ss_pred -------CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCcC-C-CCC--CccEEEeccc
Q 018172 124 -------NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTPI-T-GAA--DHDIMLFTLS 186 (360)
Q Consensus 124 -------~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~~-~-~~~--~~~i~~~S~s 186 (360)
..+..++++.....-.|.+.+ +.+.++|+++|+++|.||++.+. ..... . ... ..++ .+++
T Consensus 222 l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDi--vt~g 299 (459)
T PRK11522 222 LSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDI--LCLA 299 (459)
T ss_pred HHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCE--EEec
Confidence 123456666655556787765 46778999999999999999642 11111 0 111 2233 3889
Q ss_pred cccCCCC-ceEEEEeecCHHHHHHHHH--HHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 018172 187 KCTGHAG-SRIGWALVKDTEVARKMTR--FIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIR 263 (360)
Q Consensus 187 K~~~~~G-~r~G~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 263 (360)
|.+| .| +.+|.+++ .+++.+.+.. .....+++.|+.+..++.+.|+.+.+. .. .++.+++-+++.+.|+
T Consensus 300 K~lg-gG~~Pigav~~-~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~--~l----~~~~~~~g~~l~~~L~ 371 (459)
T PRK11522 300 KALG-GGVMPIGATIA-TEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQ--NL----PAQAEQKGDYLLDGFR 371 (459)
T ss_pred hhhh-CCCccceeEEE-cHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcc--hH----HHHHHHHHHHHHHHHH
Confidence 9998 77 68999998 7888877632 233456778999999999999876543 33 3444455555555555
Q ss_pred hc----CCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC--Ch
Q 018172 264 QS----GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARVSMLS--RE 334 (360)
Q Consensus 264 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~--~~ 334 (360)
++ +.. +. .+++.+.++.+.+.+. ..+...|.++||.+.+.. ...+.+||.... ++
T Consensus 372 ~l~~~~~~~-i~------------~VrG~Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~~---~~~~~lr~~Ppl~~t~ 435 (459)
T PRK11522 372 QLAREYPDL-VQ------------EARGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTL---NNAKTIRIEPPLTLTI 435 (459)
T ss_pred HHHHhCCCc-ee------------eEEeceeEEEEEecCchHHHHHHHHHHHCCeEEEecC---CCCCEEEEECCccCCH
Confidence 44 211 11 1123444556666432 556777888999997632 124689997644 99
Q ss_pred HHHHHHHHHHHHHHhchhc
Q 018172 335 EIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 335 e~~~~~~~~l~~~~~~~~~ 353 (360)
++++++++++.+++.+..+
T Consensus 436 ~~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 436 EQCEQVLKAARKALAAMRV 454 (459)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999976543
No 300
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.50 E-value=3.3e-13 Score=122.18 Aligned_cols=283 Identities=15% Similarity=0.078 Sum_probs=192.8
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
+.++++.+|+|+|. ++.+++..| -......+..|+++|.- |+..+-.|.++..-+++.|+..+-+.-+
T Consensus 184 hkelE~l~A~f~g~-------e~a~vF~mG-f~TNs~~~p~l~~~gsL----IiSDelNHaSi~~GaRLSgAtiRVfkHN 251 (519)
T KOG1357|consen 184 HKELEELVARFLGV-------EDAIVFSMG-FATNSMNIPSLLGKGSL----IISDELNHASLITGARLSGATTRVFRHN 251 (519)
T ss_pred HHHHHHHHHHhcCC-------cceEEEecc-ccccccCcceeecCCcc----eeeccccchheeccccccCceEEEEecC
Confidence 48899999999995 568998888 66667789999999987 8888999999999999999998877644
Q ss_pred -cccccc---------C-----CCeeE-EEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC----C-----c
Q 018172 118 -ANTFDK---------N-----NGAYI-EVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY----T-----P 171 (360)
Q Consensus 118 -~~~~~~---------~-----~~~~~-i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~----~-----~ 171 (360)
..+++. . +-.|+ |+.-.-...-|.+.. +++..+++++..+++.||+|+.+.. . .
T Consensus 252 dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~ 331 (519)
T KOG1357|consen 252 DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYF 331 (519)
T ss_pred CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeecc
Confidence 223322 1 22233 344444445666654 6777888999999999999984321 1 1
Q ss_pred CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhc---cccCChHHHHHHHHHhcccCC-CchhHHHHH
Q 018172 172 ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELG---SIGVSKESQLRAAKILGIVSD-DYPNFFEYG 247 (360)
Q Consensus 172 ~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~ 247 (360)
..+..+.+|.+++|+|+||..| ||+.+ +.++++.++...... +...++..|..... +..+.+ ......++.
T Consensus 332 g~d~~dvDImMGtftKSfga~G---Gyiag-sk~lid~lrt~s~~~~yat~~sppvaqq~~ss-l~~i~G~dgt~~g~~k 406 (519)
T KOG1357|consen 332 GVDPEDVDIMMGTFTKSFGAAG---GYIAG-SKELIDYLRTPSPSALYATSLSPPVAQQILTS-VKHIMGEDGTNRGRQK 406 (519)
T ss_pred CCCchhheeecceehhhccccc---ceecC-cHHHHhhhccCCCceeecccCChHHHHHHHHH-HHhhcCCCcccHHHHH
Confidence 2345677899999999999777 99888 899999997654332 22344455544444 444432 223778888
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCCC--CCCC
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRFG--ADAK 324 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~--~~~~ 324 (360)
.+++++++.+++..|+..+.+.+...+ + +..+ +.+-.+.- .+..+.|.+++|.++-+.+.. .-..
T Consensus 407 ~~~l~~ns~yfr~~l~~~gfivyG~~d-S---------pVvp--lll~~~~k~~~f~r~~l~~nigvVvvgfPatpl~e~ 474 (519)
T KOG1357|consen 407 IERLAENSRYFRWELQKMGFIVYGNND-S---------PVVP--LLLYGPAKIVAFSREMLERNIGVVVVGFPATPLLES 474 (519)
T ss_pred HHHHHhhhHHHHHhhhcCcEEEecCCC-C---------Ccce--eeecCcccccHHHHHHHhcCceEEEEeCCCchHHHh
Confidence 899999999999999998654433221 1 1111 22222222 555555556666655433222 1345
Q ss_pred eEEEEecC--ChHHHHHHHHHHHHHHh
Q 018172 325 YARVSMLS--REEIFNIFLERLSAIQG 349 (360)
Q Consensus 325 ~~R~s~~~--~~e~~~~~~~~l~~~~~ 349 (360)
.+|++.+. +.|+++++++.+.+.=+
T Consensus 475 r~R~c~Sa~ht~e~ld~~l~~i~~~g~ 501 (519)
T KOG1357|consen 475 RARFCLSASHTKEDLDRALEVIDRVGD 501 (519)
T ss_pred HHHhhhcccccHHHHHHHHHHHhhhch
Confidence 67998866 89999999999887653
No 301
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.50 E-value=5.4e-12 Score=108.68 Aligned_cols=273 Identities=14% Similarity=0.137 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH---HHHHhCCeeeeec
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA---ETDYLRSGLYKWD 115 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~---~~~~~g~~~~~~~ 115 (360)
..|++.+|+.+| ++..+++++|+..-+-.+...+-++|.. +|+.+-+|--.+. +..+.|+.+.++.
T Consensus 59 ~rLE~~vA~l~G-------KEAgLFv~SGTmgNllaIm~Hc~~rg~e----ii~gd~~HI~~~E~gg~s~l~gv~~~tv~ 127 (384)
T KOG1368|consen 59 NRLEQRVAELFG-------KEAGLFVPSGTMGNLLAIMVHCHQRGSE----IIVGDRAHIHRYEQGGISQLAGVHVRTVK 127 (384)
T ss_pred HHHHHHHHHHhC-------ccceeeecccccccHHHHHHHhcCCCce----EEeccchheeehhccChhhhccceeEeee
Confidence 899999999999 5667888887555544444455567887 9999887765543 3555688888877
Q ss_pred CCccccc------c----------CCCeeEEEEcCCCCCCc-ccch----HHHHHHhhhcCcEEEEeecccCCC----CC
Q 018172 116 GDANTFD------K----------NNGAYIEVVNSPNNPDG-TIRE----AVLAKVNRSAEGKLIHDLAYYWPQ----YT 170 (360)
Q Consensus 116 ~~~~~~~------~----------~~~~~~i~~~~p~NPtG-~~~~----~~~~~~~~~~~~~li~D~ay~~~~----~~ 170 (360)
...++.. . -+.|++|++.|-+|.+| .++| +.+..+|+++|+.+..|-+-.+.. -.
T Consensus 128 ~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV 207 (384)
T KOG1368|consen 128 NENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGV 207 (384)
T ss_pred eCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCC
Confidence 5544321 1 25799999999988888 7777 345678999999999998865411 11
Q ss_pred cCCC-CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHH
Q 018172 171 PITG-AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRR 249 (360)
Q Consensus 171 ~~~~-~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 249 (360)
++.. ...-+-+--.+||.+|.| +|-++..+.++++..+.++...+.+.-..+..++++.+. +.+++ ..+....+
T Consensus 208 ~vk~i~~~fDSVsiCLSKglgAP---VGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLva-l~~~~-~~L~~dHk 282 (384)
T KOG1368|consen 208 PVKKICSAFDSVSICLSKGLGAP---VGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVA-LDENV-PLLRADHK 282 (384)
T ss_pred CHHHHHHhhhhhhhhhhccCCCC---cccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH-hhcch-HHHHHHHH
Confidence 1110 111222344789998855 587666699999999888876666655555555555333 22221 22222222
Q ss_pred HHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch----HHHHHHHHhhCeeeeCCCCCCCCCCe
Q 018172 250 LMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED----EDCEKLLRAERIMARGGRRFGADAKY 325 (360)
Q Consensus 250 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~gI~~~pg~~f~~~~~~ 325 (360)
+...+.+.+...+.+.+-.|. ...|++.+.+... +.+.+.+.++||.+.+|..+ .
T Consensus 283 ----~A~~lAe~~~~~~~i~v~v~a------------~etNiv~~~l~q~~~~~~~l~~~~~k~gi~lm~~~s~-----r 341 (384)
T KOG1368|consen 283 ----RAKELAEYINTPEEIRVEVPA------------VETNIVNMVLCQARLTAEELCKFLEKNGILLMGGASR-----R 341 (384)
T ss_pred ----HHHHHHHHhccccceeeecch------------hhcceeeeecccccCCHHHHHHHHHHCCeEEeecccc-----c
Confidence 233344445555444433221 3445666544332 77888889999999987533 4
Q ss_pred EEEEecC--ChHHHHHHHHHHHHHH
Q 018172 326 ARVSMLS--REEIFNIFLERLSAIQ 348 (360)
Q Consensus 326 ~R~s~~~--~~e~~~~~~~~l~~~~ 348 (360)
+|+.+.. +.++++..+..+.+.+
T Consensus 342 ~Rivlh~Qvt~~~ve~~~~~~~k~~ 366 (384)
T KOG1368|consen 342 IRIVLHHQVTDEDVEYVKSVLSKKF 366 (384)
T ss_pred eEEEEEEecCHHHHHHHHHHHHHHH
Confidence 7998855 8999999999994433
No 302
>PRK07678 aminotransferase; Validated
Probab=99.49 E-value=1.3e-11 Score=118.16 Aligned_cols=273 Identities=11% Similarity=0.068 Sum_probs=165.2
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHHh-CCe------------eeeecCCc----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDYL-RSG------------LYKWDGDA---- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~~~---- 118 (360)
+.+++++++++++..+++.... .|.+.+.+|+.-..+|......+-.. |.. +..++.+.
T Consensus 106 ~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (451)
T PRK07678 106 YVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRM 185 (451)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccc
Confidence 3799999999999998887632 12111234887777777765433322 111 11111100
Q ss_pred -----------------cc-cc-c-CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCcC
Q 018172 119 -----------------NT-FD-K-NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTPI 172 (360)
Q Consensus 119 -----------------~~-~~-~-~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~~ 172 (360)
+. +. . .++.-+|++.-...--|.+.+ +.+.++|+++|+++|.||++.+. .....
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~ 265 (451)
T PRK07678 186 PGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKA 265 (451)
T ss_pred cccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchh
Confidence 00 10 0 234556666544444677755 46778999999999999999643 22111
Q ss_pred C--CCCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHH------HHhhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 173 T--GAADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTR------FIELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 173 ~--~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
. ...+-.-=+-+++|.++ .| +.+|.+++ .+++++.+.. +....+++.|+.+..++.+.|+.+.+. ..
T Consensus 266 ~~~~~~gv~PDivt~gK~lg-gG~~Pi~av~~-~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~--~~ 341 (451)
T PRK07678 266 FGFMNYGVKPDIITMAKGIT-SAYLPLSATAV-KKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENE--NL 341 (451)
T ss_pred HHHHhcCCCCCEEEeecccc-cCCcceeEEEE-cHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhC--CH
Confidence 1 11121111447789998 67 69999998 7899888753 123567889999999999999877553 44
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC---------c-h--HHHHHHHHhhCe
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK---------E-D--EDCEKLLRAERI 311 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~--~~~~~~l~~~gI 311 (360)
.++.++.-...++.+.+.+.+++.+.-.. +.+.++.+.+. + . ..+...+.++||
T Consensus 342 ~~~~~~~g~~l~~~l~~~~~~~~~v~~vr--------------g~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv 407 (451)
T PRK07678 342 IERSAQLGELLLEQLKEELGEHPLVGDIR--------------GKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGL 407 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEE--------------eeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCc
Confidence 55555544555555555555554322111 22222222221 1 1 456777888999
Q ss_pred eeeCCCCCC-CCCCeEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 312 MARGGRRFG-ADAKYARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 312 ~~~pg~~f~-~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
.+.+....- ...+.+||+... ++++++++++++.+++.+
T Consensus 408 ~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~ 449 (451)
T PRK07678 408 IIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALER 449 (451)
T ss_pred EEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 997632211 113679998644 999999999999999864
No 303
>PLN02271 serine hydroxymethyltransferase
Probab=99.49 E-value=3.8e-11 Score=114.33 Aligned_cols=264 Identities=13% Similarity=0.052 Sum_probs=168.0
Q ss_pred cEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH---------HHhCCeee--eecCCcc-------ccc
Q 018172 61 HIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET---------DYLRSGLY--KWDGDAN-------TFD 122 (360)
Q Consensus 61 ~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~---------~~~g~~~~--~~~~~~~-------~~~ 122 (360)
+|-.- +++.++..++.+|++|||+ |+..+..|....... ...|..+. +++.|.+ .+.
T Consensus 217 NVQp~-SGs~AN~aV~~ALl~PGD~----IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~le 291 (586)
T PLN02271 217 NVQPY-SCTSANFAVYTGLLLPGDR----IMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLE 291 (586)
T ss_pred ceeec-cHHHHHHHHHHHhcCCCCE----EEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHH
Confidence 55555 5588889999999999998 999888777665432 33454444 3334322 222
Q ss_pred c---CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcC--C-CCCCccEEEeccccccCCCCce
Q 018172 123 K---NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPI--T-GAADHDIMLFTLSKCTGHAGSR 195 (360)
Q Consensus 123 ~---~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~--~-~~~~~~i~~~S~sK~~~~~G~r 195 (360)
. ..++|+|++..-.|| ..++ +.+.++|+++|+++++|.+|..+-...- + .....+++.+|.+|++. |=|
T Consensus 292 k~a~~~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLr--GPr 367 (586)
T PLN02271 292 EKALDFRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLR--GPR 367 (586)
T ss_pred HHhhhcCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccCC--CCC
Confidence 2 568999999887887 3344 6778889999999999999985422111 0 12347899999999882 334
Q ss_pred EEEEeecCH-------------------HHHHHHHHHHhhccccCChHHHH-HHHHHhcccCCCchhHHHHHHHHHHHHH
Q 018172 196 IGWALVKDT-------------------EVARKMTRFIELGSIGVSKESQL-RAAKILGIVSDDYPNFFEYGRRLMSERW 255 (360)
Q Consensus 196 ~G~~~~~~~-------------------~~~~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 255 (360)
.|.+...+. ++.+.+.+......-+.+..... +.+.+++.... .......+++.++.
T Consensus 368 GG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~---~efk~Ya~QVv~NA 444 (586)
T PLN02271 368 GGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVAT---PEYKAYMQQVKKNA 444 (586)
T ss_pred ceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhC---hHHHHHHHHHHHHH
Confidence 488777321 35555554433222222222222 23335554332 34477888888899
Q ss_pred HHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHHhhCeeee----CCCCCCCCCCeEE
Q 018172 256 NMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLRAERIMAR----GGRRFGADAKYAR 327 (360)
Q Consensus 256 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gI~~~----pg~~f~~~~~~~R 327 (360)
+.|.+.|.+.+ +.+.. .|. ..-.+++++.. +..+.+.|.+.||.+. |+..-...++.+|
T Consensus 445 kaLA~~L~~~G-~~vv~-ggT-----------dnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiR 511 (586)
T PLN02271 445 QALASALLRRK-CRLVT-GGT-----------DNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVR 511 (586)
T ss_pred HHHHHHHHHCC-CeEee-CCC-----------CcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCccc
Confidence 99999998884 33332 111 11146677643 3889999999999874 3331112466899
Q ss_pred EEecC------ChHHHHHHHHHHHHHHh
Q 018172 328 VSMLS------REEIFNIFLERLSAIQG 349 (360)
Q Consensus 328 ~s~~~------~~e~~~~~~~~l~~~~~ 349 (360)
|+... .++++++..+.|.+++.
T Consensus 512 iGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 512 IGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred ccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 97521 67888888888888876
No 304
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.48 E-value=2e-11 Score=115.73 Aligned_cols=323 Identities=12% Similarity=0.094 Sum_probs=188.6
Q ss_pred HHHHHHhcCCceeeecCCcccccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCC
Q 018172 4 EAFWRKLGDKCTMVISGSDLMSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPG 83 (360)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~g 83 (360)
.+|+-+..-+.++...... +...-++.|. ..+..+.+|+.+|+ ++..++++|+|.++..++.+++.+|
T Consensus 43 ~~f~Gen~fr~D~~~~~~~-Ld~Ll~p~G~----i~eAqe~aA~~fgA-------d~tyFvvNGTS~ank~vi~a~~~~G 110 (557)
T COG1982 43 YDFFGENLFRADVSEADGE-LDSLLDPEGP----IKEAQELAARVFGA-------DHTYFVVNGTSTANKAVINAVLTPG 110 (557)
T ss_pred HHHhhhhhhhcccccccCc-cccccCCCcc----HHHHHHHHHHHhCC-------CceEEEECCccHHHHHHHHhhcCCC
Confidence 4455554444444333321 2222334444 59999999999995 5689999999999999999999999
Q ss_pred CCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCCccc-ccc---------------CCCe-eEEEEcCCCCCCcccch-H
Q 018172 84 GPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDANT-FDK---------------NNGA-YIEVVNSPNNPDGTIRE-A 145 (360)
Q Consensus 84 d~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~---------------~~~~-~~i~~~~p~NPtG~~~~-~ 145 (360)
|. ||++.+||.+....+.+.|+.++.+....+. +.. .+.. |++++++|+ --|+.++ +
T Consensus 111 D~----VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpT-YdGv~~n~~ 185 (557)
T COG1982 111 DK----VLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPT-YDGVCYNLR 185 (557)
T ss_pred CE----EEecCCccHHHHHHHHHcCCceEEecCCCCccccccCCCCHHHHHHHHHhChhhheeEEEecCc-cceEeecHH
Confidence 99 9999999999999999999999987654332 211 2455 899999997 4899988 4
Q ss_pred HHHHHhhhcCcEEEEeecccC--C---CCCcCCCCCCccEEEeccccccCCCCceEEEEeecC--HHHHHHHHHHHhhcc
Q 018172 146 VLAKVNRSAEGKLIHDLAYYW--P---QYTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKD--TEVARKMTRFIELGS 218 (360)
Q Consensus 146 ~~~~~~~~~~~~li~D~ay~~--~---~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~--~~~~~~l~~~~~~~~ 218 (360)
.+.+...+.++|+.+|+++.. . ..+........++++.|.+|.++ ..-....+...+ .-..+++........
T Consensus 186 ~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~~tqS~HK~l~-alSQaS~iHv~~~~~~~~~r~nea~~~h~ 264 (557)
T COG1982 186 KIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADFVTQSTHKLLA-ALSQASMIHVKDGRAVNHERFNEALMMHQ 264 (557)
T ss_pred HHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceEEEechhhhhh-hhhhhHHHhhCCCccCCHHHHHHHHHHHc
Confidence 555555459999999999873 1 11222224678899999999876 333334555533 111233333322222
Q ss_pred ccCChHHHHHHHHHhccc-CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCc-----ccccc---cccCCCCC
Q 018172 219 IGVSKESQLRAAKILGIV-SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLE-----YCNFT---GKFTNSHP 289 (360)
Q Consensus 219 ~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~ 289 (360)
.+.+.-...|...+-+.. ...-+...++..+..-+.|+.+.+....++++.+..+... +..|. +....-++
T Consensus 265 STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP 344 (557)
T COG1982 265 STSPSYPLMASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDP 344 (557)
T ss_pred cCCchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccc
Confidence 222222222222221110 1111233444455666677777777777776665544421 11110 00111111
Q ss_pred CcccccCCc-h---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 290 GFAWLESKE-D---EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 290 ~~~~~~~~~-~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
.=+.+..++ + ..+.+.|+++||...-.. +..+=+-++.........++.|.++.+
T Consensus 345 ~Klti~tp~~Gipg~~v~~~L~e~gii~e~~~-----d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 345 TKLTITTPEFGIPGAIVAKYLREHGIIPEETG-----DYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred cEEEEecCCCCCcHHHHHHHHHHcCCeeeecC-----CceeeEEeeeccchHHHHHHHHHHHHH
Confidence 112233322 1 888999999999865322 222223332222455555666666555
No 305
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.48 E-value=1.4e-11 Score=119.16 Aligned_cols=267 Identities=10% Similarity=0.027 Sum_probs=158.8
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHH-HHHHhCCe------------eeeecCCc----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPA-ETDYLRSG------------LYKWDGDA---- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~-~~~~~g~~------------~~~~~~~~---- 118 (360)
+.+++++++++++..+++.... .|.+.+.+|+.-+-+|..... .+...|.. +..++.+.
T Consensus 152 ~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~ 231 (504)
T PLN02760 152 GKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRF 231 (504)
T ss_pred CEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCccccc
Confidence 4689999999999999887731 121111247777777776643 22222321 11111100
Q ss_pred ---------------cccc-----cC-CCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccC-CCCCc
Q 018172 119 ---------------NTFD-----KN-NGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYW-PQYTP 171 (360)
Q Consensus 119 ---------------~~~~-----~~-~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~-~~~~~ 171 (360)
+.++ .. .+..+|++.....-.|.+.+ +.+.++|+++|+++|.||++.+ +....
T Consensus 232 ~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~ 311 (504)
T PLN02760 232 HLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGT 311 (504)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccch
Confidence 0011 11 23445565544555677755 4678899999999999999953 22222
Q ss_pred CC--CCCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHH-------HhhccccCChHHHHHHHHHhcccCCCch
Q 018172 172 IT--GAADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRF-------IELGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 172 ~~--~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
.. ...+-.-=+.+++|.+| .| +.+|.+++ .+++++.+... ....+++.|+.+..++.+.|+.+.+.
T Consensus 312 ~~a~e~~gv~PDivtlgK~lg-gG~~PigAv~~-~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~-- 387 (504)
T PLN02760 312 MFGCDKYNIKPDLVSLAKALS-SAYMPIGAVLV-SPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKER-- 387 (504)
T ss_pred hhHHHhcCCCCcEEEeccccc-CCccccceEee-cHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhC--
Confidence 11 11111122678899998 66 48999888 78998887531 23457788999999999999876543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--------------hHHHHHHHH
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--------------DEDCEKLLR 307 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~l~ 307 (360)
.. .++.+++-+++.+.|+++....++. .+++.+.++.+.+.+ ...+...+.
T Consensus 388 ~l----~~~~~~~g~~l~~~L~~l~~~~~v~-----------~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~ 452 (504)
T PLN02760 388 NI----PEHVNKIAPRFQDGIKAFSGSPIIG-----------EIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECK 452 (504)
T ss_pred CH----HHHHHHHHHHHHHHHHHHhcCCCee-----------eEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHH
Confidence 33 3344444444444444331111100 112233333333311 134566778
Q ss_pred hhCeeeeCCCCCCCCCCeEEEEe--cCChHHHHHHHHHHHHHHhch
Q 018172 308 AERIMARGGRRFGADAKYARVSM--LSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 308 ~~gI~~~pg~~f~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~~ 351 (360)
++||.+.+. .+.+||+. ..++++++++++++.+++.+.
T Consensus 453 ~~Gvl~~~~------g~~lrl~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 453 KRGMLVRVA------GDNIMMSPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred hCCcEEEec------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 899999762 24689985 469999999999999998754
No 306
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.48 E-value=2.3e-11 Score=113.61 Aligned_cols=268 Identities=13% Similarity=0.070 Sum_probs=173.0
Q ss_pred CCcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHH-HHHhCCee-------------eeecCC--cc--
Q 018172 59 GRHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAE-TDYLRSGL-------------YKWDGD--AN-- 119 (360)
Q Consensus 59 ~~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~-~~~~g~~~-------------~~~~~~--~~-- 119 (360)
.+.+++++++++++.++++.... .|.. .||...-.|...... +.+.|-.. ..+|.+ ..
T Consensus 117 ~~~~~f~~sGaeA~E~AiKiAr~~Tgr~---~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p 193 (447)
T COG0160 117 LKKVFFGNSGAEAVEAAIKIARAYTGRP---GVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCP 193 (447)
T ss_pred CCeEEecCCcHHHHHHHHHHHHHHhCCC---cEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCc
Confidence 35799999999999999887632 1221 277777666655444 33333222 222211 00
Q ss_pred -ccc-----c----------------CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCC-CCc
Q 018172 120 -TFD-----K----------------NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQ-YTP 171 (360)
Q Consensus 120 -~~~-----~----------------~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~-~~~ 171 (360)
+.. . ..+..++++..-..-.|++.+ +.+.++|+++|+++|.||++.+.. ...
T Consensus 194 ~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~ 273 (447)
T COG0160 194 FGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGK 273 (447)
T ss_pred ccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc
Confidence 000 0 125666777777788888865 467889999999999999998532 222
Q ss_pred CC--CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHH
Q 018172 172 IT--GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRR 249 (360)
Q Consensus 172 ~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 249 (360)
+. ...+-.-=+-+++|.+| .|+.+|.++. .+++.+ ........+++.|+.+..++.+.|+.+.+. ..+++..+
T Consensus 274 ~fa~E~~gv~PDivt~aK~ig-~G~Pl~avv~-r~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e--~L~~~a~~ 348 (447)
T COG0160 274 MFAFEHFGVEPDIVTLAKSLG-GGLPLSAVVG-RAEIMD-WPPGGHGGTFGGNPVACAAALAVLDVIEEE--NLLERAAE 348 (447)
T ss_pred chhhhhcCCCCCEEEeccccc-CCCceeEEec-cHHhcc-cCCcccCCCCCcCHHHHHHHHHHHHHHHHc--cHHHHHHH
Confidence 22 12222223557789999 6999999998 788888 444444466999999999999999866543 45555554
Q ss_pred HHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC--------ch---HHHHHHHHhhCeeeeCCCC
Q 018172 250 LMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--------ED---EDCEKLLRAERIMARGGRR 318 (360)
Q Consensus 250 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~l~~~gI~~~pg~~ 318 (360)
.=...++.|.+.-.+++. +. -+++.+.++.+.+. +. +.+.+.+.++|+.+..+..
T Consensus 349 ~G~~l~~~L~~l~~~~~~--Ig------------dVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~ 414 (447)
T COG0160 349 LGEYLRDRLEELQEKHPL--IG------------DVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGP 414 (447)
T ss_pred HHHHHHHHHHHHHhhcCc--ee------------cccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccCC
Confidence 444444444444445542 11 12344445544442 22 6678888899998876443
Q ss_pred CCCCCCeEEEEe--cCChHHHHHHHHHHHHHHhch
Q 018172 319 FGADAKYARVSM--LSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 319 f~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~~ 351 (360)
+ .+.+||.. ..++|+++.+++.|.+.+.+.
T Consensus 415 ~---~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 415 H---GNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred C---CcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 3 45899964 449999999999999998753
No 307
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.48 E-value=1.4e-12 Score=121.18 Aligned_cols=252 Identities=12% Similarity=0.072 Sum_probs=161.8
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CC-CCCCceEEEeCCCCCCcHHHHHHh--------CCe-----eeeecC-Ccccccc
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PG-GPEPISVVSAAPYYSQYPAETDYL--------RSG-----LYKWDG-DANTFDK 123 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~g-d~~~~~vl~~~p~~~~~~~~~~~~--------g~~-----~~~~~~-~~~~~~~ 123 (360)
+.+++++++++++..+++.... .| ++ |+..+.+|......+-.. +.. +..++. |.+.++.
T Consensus 82 ~~v~~~~SGseA~e~Alklar~~~gr~~----Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~ 157 (364)
T PRK04013 82 EYVYMGNSGTEAVEAALKFARLYTGRKE----IIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKE 157 (364)
T ss_pred CEEEEeCchHHHHHHHHHHHHHHhCCCE----EEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHHH
Confidence 4799999999999999887742 34 34 888888888765433321 111 112221 1122221
Q ss_pred --CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCcCCC--CCCccEEEeccccccCCCCc
Q 018172 124 --NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTPITG--AADHDIMLFTLSKCTGHAGS 194 (360)
Q Consensus 124 --~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~~~~--~~~~~i~~~S~sK~~~~~G~ 194 (360)
++++.+|++.......|...+ +.+.++|+++|+++|.||++.+........ ..+-.-=+-+++|.++ .|+
T Consensus 158 ~i~~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~~gv~PDiv~~gK~lg-gG~ 236 (364)
T PRK04013 158 AITKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYKVEPDIVTMGKGIG-NGV 236 (364)
T ss_pred HhcCCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHhcCCCCCEEEeccccc-CCc
Confidence 346788887766666666543 467788999999999999988432211111 1111111456689999 789
Q ss_pred eEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Q 018172 195 RIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYP 274 (360)
Q Consensus 195 r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 274 (360)
.+|.++. ..++. ......+++.|+.+..++.+.++.+.+. ..+++.++.+ +.+.. +. +
T Consensus 237 P~~a~~~-~~~~~----~~~~~~T~~gnp~~~aaa~a~l~~i~~~--~l~~~~~~~l--------~~l~~-~~--v---- 294 (364)
T PRK04013 237 PVSLTLT-NFDVE----RGKHGSTFGGNPLACKAVAVTLRILRRE--RLVEKAGEKF--------IEIKG-ER--V---- 294 (364)
T ss_pred eeEEEEe-ccccc----CCCcCCCCCcCHHHHHHHHHHHHHHHhc--cHHHHHHHHH--------HHhcc-Cc--c----
Confidence 9999988 55542 2234467889999999999999877654 5555554432 11211 11 1
Q ss_pred CcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec--CChHHHHHHHHHHHHHHhch
Q 018172 275 LEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRFGADAKYARVSML--SREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~~ 351 (360)
..+++.+.++.+.+.+. ..+.+.+.++|+.+.+. ..+.+||... .+++++++++++|.+.+.+.
T Consensus 295 --------~~vRG~Gl~~gve~~~~~~~i~~~~~~~Gll~~~~-----g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 295 --------VTTRGRGLMIGIVLKKPVGKYVEELQNRGYLVHTA-----GQRVIRLLPPLIISKDTMEEAKSAIEGVINDI 361 (364)
T ss_pred --------eeeeeCcEEEEEEeCCcHHHHHHHHHhCCcEEeeC-----CCCEEEEeCCcccCHHHHHHHHHHHHHHHHHH
Confidence 12345556667777554 56777788899998762 2368999753 39999999999999999753
No 308
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.47 E-value=1.6e-11 Score=125.79 Aligned_cols=269 Identities=13% Similarity=0.079 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCC--CCCCceEEEeCCCCCCcHHHH----HHhCCee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPG--GPEPISVVSAAPYYSQYPAET----DYLRSGL 111 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~g--d~~~~~vl~~~p~~~~~~~~~----~~~g~~~ 111 (360)
-++++.++++.|. +..++.+..++|++.+.++.++ ..++ ++ |++++-.|+.....+ +..|+++
T Consensus 124 ~~~Qt~la~LtG~------~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~----vlv~~~~hP~~~~v~~t~a~~~G~ev 193 (954)
T PRK05367 124 LNFQTMVADLTGL------EIANASLLDEATAAAEAMALAKRVSKSKSNR----FFVDDDVHPQTLDVLRTRAEPLGIEV 193 (954)
T ss_pred HHHHHHHHHHHCC------ChhhccccccHHHHHHHHHHhhhhccCCCCE----EEEcCccCHHHHHHHHHHHHhCCCEE
Confidence 4566778888887 6678999999999999888877 3443 55 999999999887654 5579999
Q ss_pred eeecCCccccccCCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccccc--
Q 018172 112 YKWDGDANTFDKNNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKC-- 188 (360)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~-- 188 (360)
+.++.+.+ +. ++++.++++.+| |-+|.+.+ +.+.++++++|+++++|...........++..+.+++++|..|.
T Consensus 194 ~~~~~~~d-~~-~~~~~~vlvq~p-~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~ 270 (954)
T PRK05367 194 VVGDAAKA-LD-HDDVFGVLLQYP-GTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGV 270 (954)
T ss_pred EEecCccC-CC-cccEEEEEEecC-CCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCC
Confidence 99886542 22 345666777777 46999988 66777777799999999865433444456888999999999996
Q ss_pred ---cCCCCceEEEEeecCHHHHHHHH-HHHh-----------------------hccccCChHHHHHHHHHh-----ccc
Q 018172 189 ---TGHAGSRIGWALVKDTEVARKMT-RFIE-----------------------LGSIGVSKESQLRAAKIL-----GIV 236 (360)
Q Consensus 189 ---~~~~G~r~G~~~~~~~~~~~~l~-~~~~-----------------------~~~~~~~~~~~~~~~~~l-----~~~ 236 (360)
||-|| .|++.+ .+++.+.+. +... ....+.|-.+..++.+++ ..+
T Consensus 271 P~g~GGP~--aGflav-r~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~ 347 (954)
T PRK05367 271 PMGFGGPH--AAYFAV-RDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYH 347 (954)
T ss_pred CCCCCCCC--EEEEEE-CHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 55465 899988 677776662 1110 000011111111111111 111
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-chHHHHHHHHhhCeeeeC
Q 018172 237 SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-EDEDCEKLLRAERIMARG 315 (360)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gI~~~p 315 (360)
. ..-+.++.++...+..++.+.|+.. ++.+..+. + | .-+.++++ +..++.+.|.++||.++.
T Consensus 348 -g--~~Gl~~Ia~~~~~la~~l~~~L~~~-G~~~~~~~--~--f---------~~~~~~~~~~~~~i~~~l~~~gi~~~~ 410 (954)
T PRK05367 348 -G--PEGLKAIARRVHRLAAILAAGLRAL-GLEVVHDS--F--F---------DTLTVEVGGDAAAVLARALAAGINLRR 410 (954)
T ss_pred -h--hhhHHHHHHHHHHHHHHHHHHHHhc-CcccCCCC--C--C---------CeEEEeCCCCHHHHHHHHHHCCceecc
Confidence 2 1667888888999999999999774 44443221 1 0 02334443 348888999999998843
Q ss_pred CCCCCCCCCeEEEEecC--ChHHHHHHHHHHH
Q 018172 316 GRRFGADAKYARVSMLS--REEIFNIFLERLS 345 (360)
Q Consensus 316 g~~f~~~~~~~R~s~~~--~~e~~~~~~~~l~ 345 (360)
. .++.+|+|+.- ++++++++++++.
T Consensus 411 ---~--~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 411 ---V--DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred ---c--cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 2 24579999855 8999999999997
No 309
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.46 E-value=4.4e-11 Score=110.78 Aligned_cols=253 Identities=16% Similarity=0.128 Sum_probs=155.1
Q ss_pred cCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH-----H-----HHhCCeeeeecCCccccccC----------
Q 018172 65 GTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE-----T-----DYLRSGLYKWDGDANTFDKN---------- 124 (360)
Q Consensus 65 t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~-----~-----~~~g~~~~~~~~~~~~~~~~---------- 124 (360)
..+++.+...++.+|++|||+ |+..++.+.....- . .....+.+.+++|.+....|
T Consensus 92 p~SGs~An~av~~aLl~pGD~----Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~ 167 (399)
T PF00464_consen 92 PHSGSQANLAVYMALLKPGDT----IMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKE 167 (399)
T ss_dssp -SSHHHHHHHHHHHHT-TT-E----EEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHH
T ss_pred cCCchHHHHHHHHHHHhhcCc----EEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhh
Confidence 356788999999999999998 88887776655321 1 23456777777775443332
Q ss_pred CCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecccC-----CC-CCcCCCCCCccEEEeccccccCCCCceEEE
Q 018172 125 NGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYW-----PQ-YTPITGAADHDIMLFTLSKCTGHAGSRIGW 198 (360)
Q Consensus 125 ~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay~~-----~~-~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~ 198 (360)
.++|+|++..-+.|-=.-+ +.++++|++.|.+++.|.+|.. +. ..|+ .. .+++.+|.+|+| +|=|.|.
T Consensus 168 ~kPklIi~G~S~y~~~~d~-~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~--~~-ADvvt~sThKtl--~GPrggi 241 (399)
T PF00464_consen 168 HKPKLIICGASSYPRPIDF-KRFREIADEVGAYLMADISHIAGLIAGGLFPNPF--PY-ADVVTGSTHKTL--RGPRGGI 241 (399)
T ss_dssp H--SEEEEE-SSTSS---H-HHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GC--CT-SSEEEEESSGGG---SSS-EE
T ss_pred cCCCEEEECchhccCccCH-HHHHHHHHhcCcEEEecccccccceehheecCcc--cc-ceEEEeeccccc--cccCceE
Confidence 4889999876554332222 6778899999999999999972 22 2333 22 689999999998 4667799
Q ss_pred Eeec-------------CHHHHHHHHHHHhhccccCChHHHHHHHH-HhcccCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 018172 199 ALVK-------------DTEVARKMTRFIELGSIGVSKESQLRAAK-ILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQ 264 (360)
Q Consensus 199 ~~~~-------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 264 (360)
|.+. ++++.+.+.+.......+.+.....++.+ ++..... ....+..+++.++.+.|.+.|.+
T Consensus 242 I~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~---~~fk~Ya~qVv~NAk~La~~L~~ 318 (399)
T PF00464_consen 242 ILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALS---PEFKEYAKQVVKNAKALAEALQE 318 (399)
T ss_dssp EEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTS---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccC---HHHHHHHHHHHHHHHHHHHHHhh
Confidence 9984 38999999887655544544454444443 4543322 56678888899999999999999
Q ss_pred cCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHHhhCeeee----CCCCCCCCCCeEEEEecC----
Q 018172 265 SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLRAERIMAR----GGRRFGADAKYARVSMLS---- 332 (360)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gI~~~----pg~~f~~~~~~~R~s~~~---- 332 (360)
.+ +.+.. .+ ...-.+|+++.. +..+.+.|.+.||.+. |+..-...+..+||+...
T Consensus 319 ~G-~~v~~-gg-----------Td~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~r 385 (399)
T PF00464_consen 319 RG-FKVVT-GG-----------TDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRR 385 (399)
T ss_dssp TT--EEGG-GS------------SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHT
T ss_pred CC-cEEEE-CC-----------CCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhC
Confidence 85 34331 11 111146778743 2778999999999985 333111135689998622
Q ss_pred --ChHHHHHHHHH
Q 018172 333 --REEIFNIFLER 343 (360)
Q Consensus 333 --~~e~~~~~~~~ 343 (360)
.+++|++..+.
T Consensus 386 G~~e~dm~~iA~~ 398 (399)
T PF00464_consen 386 GMKEEDMKEIAEL 398 (399)
T ss_dssp T--HHHHHHHHHH
T ss_pred CCCHHHHHHHHhh
Confidence 56777665543
No 310
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.46 E-value=1.1e-10 Score=101.36 Aligned_cols=288 Identities=14% Similarity=0.097 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEe-CCCCCC-cHHHHHHhCCeeeeecC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSA-APYYSQ-YPAETDYLRSGLYKWDG 116 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~-~p~~~~-~~~~~~~~g~~~~~~~~ 116 (360)
.++++-+...++. ..+.-.++...++.+...++..++.|||. |++- .-.|.- ..+.++.+|+++..++.
T Consensus 53 ~~v~egikyVFkT-----~n~~tf~isgsGh~g~E~al~N~lePgd~----vLv~~~G~wg~ra~D~~~r~ga~V~~v~~ 123 (385)
T KOG2862|consen 53 DEVLEGIKYVFKT-----ANAQTFVISGSGHSGWEAALVNLLEPGDN----VLVVSTGTWGQRAADCARRYGAEVDVVEA 123 (385)
T ss_pred HHHHHHHHHHhcc-----CCCceEEEecCCcchHHHHHHhhcCCCCe----EEEEEechHHHHHHHHHHhhCceeeEEec
Confidence 4555555554442 13335667777799999999999999998 6655 455553 35778889999999987
Q ss_pred Ccccccc---------CCCeeEEEEcCCCCCCcccch--HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecc
Q 018172 117 DANTFDK---------NNGAYIEVVNSPNNPDGTIRE--AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTL 185 (360)
Q Consensus 117 ~~~~~~~---------~~~~~~i~~~~p~NPtG~~~~--~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~ 185 (360)
|...-.. ..+++++++++-..-||+..+ +...++|++|+.++++|.+-+-+..+...+.++.++.....
T Consensus 124 ~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgS 203 (385)
T KOG2862|consen 124 DIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGS 203 (385)
T ss_pred CcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhhcccEEEecc
Confidence 7532211 357899999988888999987 66778999999999999998876667777889999888888
Q ss_pred ccccCC-CCceEEEEeecCHHHHHHHHHHHh--------------hc---------cccCChHHHHHHHHHhcccCCCch
Q 018172 186 SKCTGH-AGSRIGWALVKDTEVARKMTRFIE--------------LG---------SIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 186 sK~~~~-~G~r~G~~~~~~~~~~~~l~~~~~--------------~~---------~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
.|+++. +| ++-+.. ++...++++..+. ++ ..+++....+.+-++|+.+.+
T Consensus 204 QKaL~aP~G--Lsiisf-S~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~e--- 277 (385)
T KOG2862|consen 204 QKALGAPAG--LSIISF-SDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAE--- 277 (385)
T ss_pred hhhcCCCCC--cceeec-CHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHH---
Confidence 899974 45 444555 7777777765442 11 113445555666666665543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhh-CeeeeCCC
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAE-RIMARGGR 317 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~-gI~~~pg~ 317 (360)
+-++++.++.++..++++..|.+++..-....+. .....--.+.++. ..++...+..+ ++.+-.|-
T Consensus 278 eGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~----------~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~ggl 347 (385)
T KOG2862|consen 278 EGLENSWRRHREMSKWLKLSLEALGLQLFVVDEE----------LRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGL 347 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccceecChh----------hccCcceeeecCCCCCHHHHHHHHHHhcCEEecccc
Confidence 8899999999999999999999985322221110 0111111233332 25555555555 66554432
Q ss_pred CCCCCCCeEEEEecC---ChHHHHHHHHHHHHHHhchh
Q 018172 318 RFGADAKYARVSMLS---REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 318 ~f~~~~~~~R~s~~~---~~e~~~~~~~~l~~~~~~~~ 352 (360)
.- ..+.++||.+.. +-|.++..++.|...+.+.+
T Consensus 348 g~-~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~~ 384 (385)
T KOG2862|consen 348 GP-TVGKVFRIGLLGCNANVEYIDNVVELLKLALQRKK 384 (385)
T ss_pred CC-CcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhcc
Confidence 22 246799998733 78999999999999988764
No 311
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.45 E-value=3.7e-11 Score=115.07 Aligned_cols=265 Identities=11% Similarity=0.017 Sum_probs=160.9
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHHHh-CC-------------eeeeecCCc------
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETDYL-RS-------------GLYKWDGDA------ 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~------ 118 (360)
+.+.+++++++++..+++.... .|.. +|+.-..+|......+..+ |. .+..++...
T Consensus 114 ~~v~f~~SGsEA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 190 (457)
T PRK05639 114 PKVLFGLSGSDAVDMAIKVSKFSTRRP---WILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPW 190 (457)
T ss_pred CEEEEeCchHHHHHHHHHHHHHhcCCC---eEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccc
Confidence 4799999999999999887642 2322 4887777777765433322 21 011222110
Q ss_pred --------cc--------cc--------cCCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCC
Q 018172 119 --------NT--------FD--------KNNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQY 169 (360)
Q Consensus 119 --------~~--------~~--------~~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~ 169 (360)
+. ++ ...+..+|++.-.....|.+.+ +.+.++|+++|+++|.||++.+...
T Consensus 191 ~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~Gr 270 (457)
T PRK05639 191 GINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGR 270 (457)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCc
Confidence 00 10 0234556666555555677654 4677899999999999999884211
Q ss_pred Cc-C-C-C--CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHH
Q 018172 170 TP-I-T-G--AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFF 244 (360)
Q Consensus 170 ~~-~-~-~--~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 244 (360)
.. . . . ....++++ ++|.++ .|+.+|.+++ .+++++.. ......+++.|+.+..++.+.++.+.+. ..+
T Consensus 271 tG~~~a~~~~gv~PDiv~--~gK~l~-gG~pi~av~~-~~~i~~~~-~~~~~~T~~g~p~~~aaa~a~l~~l~~~--~l~ 343 (457)
T PRK05639 271 TGKWFASEWFEVKPDLII--FGKGVA-SGMGLSGVIG-RKELMDLT-SGSALLTPAANPVISAAAEATLEIIEEE--NLL 343 (457)
T ss_pred CchHHHHHhcCCCCCEEE--echhhc-CCCcceeEEe-hHHHHhhc-CCCcccCCCcCHHHHHHHHHHHHHHHHc--cHH
Confidence 11 1 0 1 11234444 799998 7899999998 78888732 2112356678888888888888866543 444
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccC------Cch---HHHHHHHHhhCeeeeC
Q 018172 245 EYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLES------KED---EDCEKLLRAERIMARG 315 (360)
Q Consensus 245 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~~~l~~~gI~~~p 315 (360)
++.++.-...++.|.+...+++.+.-. ++.+.++.+.+ ++. ..+.+.+.++|+.+.+
T Consensus 344 ~~~~~~g~~l~~~L~~l~~~~~~~~~V--------------rG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~ 409 (457)
T PRK05639 344 KNALKVGEFIKKRLLEMKESFEVIGDV--------------RGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLILPS 409 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEee--------------ccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEee
Confidence 555544334444443333344322211 12222333332 121 4567777889999976
Q ss_pred CCCCCCCCCeEEEEecC--ChHHHHHHHHHHHHHHhch
Q 018172 316 GRRFGADAKYARVSMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 316 g~~f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
. +...+.+||.... ++++++++++++.+.+.+.
T Consensus 410 ~---g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~ 444 (457)
T PRK05639 410 Y---GMFGNVIRITPPLVITKEIAEKGLEIMERAIKDA 444 (457)
T ss_pred c---CCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 3 2224689997643 9999999999999998764
No 312
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.44 E-value=2.9e-11 Score=115.77 Aligned_cols=267 Identities=11% Similarity=-0.006 Sum_probs=161.4
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHH-hCC------------eeeeecCCc----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDY-LRS------------GLYKWDGDA---- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~---- 118 (360)
+.+++++++++++..+++...+ .|.+.+.+|+.-..+|......+-. .|- .+..++.+.
T Consensus 115 ~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 194 (453)
T PRK06943 115 GHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGA 194 (453)
T ss_pred CEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCcccc
Confidence 4799999999999999887631 1211123488888777776532222 211 111121110
Q ss_pred --------------cccc----c-CCCeeEEEEcC-CCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCcC
Q 018172 119 --------------NTFD----K-NNGAYIEVVNS-PNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTPI 172 (360)
Q Consensus 119 --------------~~~~----~-~~~~~~i~~~~-p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~~ 172 (360)
+.++ . .++..+|++.- ...-.|.+.+ +.++++|+++|+++|.||++.+. .....
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~ 274 (453)
T PRK06943 195 RPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTF 274 (453)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcch
Confidence 1111 1 13455566654 2566777654 46788999999999999999753 22111
Q ss_pred C--CCCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHH------HhhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 173 T--GAADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRF------IELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 173 ~--~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
. ...+-.-=+-+++|.++ .| +.+|.+++ .+++.+.+... ....+++.|+++..++.+.|+.+.+. ..
T Consensus 275 fa~~~~gv~PDivt~gKgl~-gG~~Pi~av~~-~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~--~l 350 (453)
T PRK06943 275 FACEQAGVWPDFLCLSKGIS-GGYLPLSLVLS-RDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAED--DV 350 (453)
T ss_pred hHHHhCCCCCCeEeeehhhc-cCcccceEEEE-cHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhc--CH
Confidence 1 11121112344589998 78 58999998 78888877531 23457788999999999999877553 44
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC---c-----hHHHHHHHHhhCeeeeC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK---E-----DEDCEKLLRAERIMARG 315 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~l~~~gI~~~p 315 (360)
+++.++.=...++.+.+. .+++.+. .+++.+.++.+.+. + ...+...+.++||.+.+
T Consensus 351 ~~~~~~~G~~l~~~L~~l-~~~~~v~--------------~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~ 415 (453)
T PRK06943 351 LARNARKSARLRAALAPL-AAHPQVR--------------HLRQRGTIFAFDVALDGDAARTFSRRFFEAALERELLLRP 415 (453)
T ss_pred HHHHHHHHHHHHHHHHHH-hcCCCEE--------------eEeccccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEe
Confidence 444444433333333322 2233221 11233334444442 1 14566778899999876
Q ss_pred CCCCCCCCCeEEEE--ecCChHHHHHHHHHHHHHHhch
Q 018172 316 GRRFGADAKYARVS--MLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 316 g~~f~~~~~~~R~s--~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
. .+.+||+ +..++++++++++++.+.+.+.
T Consensus 416 ~------g~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 416 I------GTTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred c------CCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 2 2368998 5569999999999999999764
No 313
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.44 E-value=1.6e-11 Score=109.74 Aligned_cols=279 Identities=14% Similarity=0.170 Sum_probs=192.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC--CCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeec-
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS--PGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWD- 115 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~--~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~- 115 (360)
.+|+..+|++++ ++..+++++ +-=+....+..|.+ ||=. ++..+-.|.+....++..+++-..+.
T Consensus 219 v~LE~eLA~LHq-------K~aALlFsS-CfVANDstLftLak~lpgce----i~SD~gNHASMI~GIrns~v~K~IFrH 286 (570)
T KOG1360|consen 219 VRLEAELADLHQ-------KEAALLFSS-CFVANDSTLFTLAKKLPGCE----IFSDEGNHASMIQGIRNSRVPKHIFRH 286 (570)
T ss_pred hhHHHHHHHHhc-------Ccceeeeee-eeeccchHHHHHHHHCCCcE----EeccccchHHHHHHhhhcCCcceeecc
Confidence 677888888877 343444443 44444555555522 3443 55566777777788888777654443
Q ss_pred CCcccccc------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCc----CCC----CCCccE
Q 018172 116 GDANTFDK------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTP----ITG----AADHDI 180 (360)
Q Consensus 116 ~~~~~~~~------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~----~~~----~~~~~i 180 (360)
.|.+.++. ...+|+|-..+.+..+|.+.+ +++..+++++|.+-.+||+|+-+-+.+ +.+ ....+|
T Consensus 287 ND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDi 366 (570)
T KOG1360|consen 287 NDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDI 366 (570)
T ss_pred CCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhh
Confidence 34444433 246789999999999999988 778888888999999999998432222 211 233478
Q ss_pred EEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhc--cccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELG--SIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
+.+++.|+||.-| |||.+ ...+++.++.+.... +-+.++.....|.++++.+.. ++-...|..-+++..++
T Consensus 367 IsGTLgKafGcVG---GYIAa-t~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~---~eg~~lR~~hqrnv~~~ 439 (570)
T KOG1360|consen 367 ISGTLGKAFGCVG---GYIAA-TRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKS---EEGRVLRRQHQRNVKYV 439 (570)
T ss_pred cccchhhhccccc---ceehh-hhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhh---hhhHHHHHHHHHHHHHH
Confidence 8999999999888 99988 899999998876432 335666666677777765543 45566777778888899
Q ss_pred HHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch----HHHHHHHHhhCeeeeCCCCCCC--CCCeEEEEecC
Q 018172 259 RQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED----EDCEKLLRAERIMARGGRRFGA--DAKYARVSMLS 332 (360)
Q Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~gI~~~pg~~f~~--~~~~~R~s~~~ 332 (360)
.+.|.+++...+..|. . .+-+.+.+. +.+..++.+++|++..-.+... +..-+|+..+.
T Consensus 440 kq~l~~~GiPVi~~pS-H--------------IiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP 504 (570)
T KOG1360|consen 440 KQLLMELGIPVIPNPS-H--------------IIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTP 504 (570)
T ss_pred HHHHHHcCCcccCCCc-c--------------eeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCC
Confidence 9999998654444332 1 244555454 5567788888999986443322 45578887766
Q ss_pred --ChHHHHHHHHHHHHHHhch
Q 018172 333 --REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 333 --~~e~~~~~~~~l~~~~~~~ 351 (360)
+++.++.+++++.++..+.
T Consensus 505 ~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 505 HHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred CCCHHHHHHHHHHHHHHHHHc
Confidence 8999999999999988654
No 314
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.44 E-value=5.6e-11 Score=112.85 Aligned_cols=265 Identities=11% Similarity=0.024 Sum_probs=160.9
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHHh-CC-------------eeeeecCCc---
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDYL-RS-------------GLYKWDGDA--- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~--- 118 (360)
+.+++++++++++..+++.... .|.+.+.+|+.-..+|......+-.. +. ....++...
T Consensus 101 ~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 180 (422)
T PRK05630 101 DHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRG 180 (422)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccC
Confidence 5899999999999998886532 12222235888777777654333221 21 111121110
Q ss_pred ---ccc-------cc--CCCeeEEEEcC-CCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCC-cCC--C--C
Q 018172 119 ---NTF-------DK--NNGAYIEVVNS-PNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYT-PIT--G--A 175 (360)
Q Consensus 119 ---~~~-------~~--~~~~~~i~~~~-p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~-~~~--~--~ 175 (360)
+.. +. ..+..+|++.- ...-.|...+ +.+.++|+++|+++|.||++.+.... ... . .
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~g 260 (422)
T PRK05630 181 SSPQEISEYLRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAG 260 (422)
T ss_pred CChHHHHHHHHHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcC
Confidence 000 00 13455565554 2556677654 46778999999999999998742211 111 1 1
Q ss_pred CCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHH------HhhccccCChHHHHHHHHHhcccCCCchhHHHHHH
Q 018172 176 ADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRF------IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGR 248 (360)
Q Consensus 176 ~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 248 (360)
-.-+|+ +++|.++ .| ..+|++++ ++++.+.+... ....+++.|+.+..++.+.++.+.+. ...
T Consensus 261 v~PDi~--t~gK~l~-gG~~p~~av~~-~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~--~~~---- 330 (422)
T PRK05630 261 VTPDIM--CVGKALT-GGFMSFAATLC-TDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETG--MWR---- 330 (422)
T ss_pred CCCCee--eeechhh-cCccccceeec-cHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhC--cHH----
Confidence 122333 7899986 56 47899998 88888887531 22457789999999999988876543 333
Q ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhhCeeeeCCCCCCCCCCe
Q 018172 249 RLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERIMARGGRRFGADAKY 325 (360)
Q Consensus 249 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~pg~~f~~~~~~ 325 (360)
+.++++-+++.+.|+.+...... ..+++.+.++.+.+.+ ...+.+.+.++||.+.+. .+.
T Consensus 331 ~~~~~~g~~l~~~L~~l~~~~~v-----------~~vRg~Gl~~~ie~~~~~~~~~~~~~~~~~Gl~~~~~------g~~ 393 (422)
T PRK05630 331 KQVKRIEAELIAGLSPLAHLPGV-----------ADVRVLGAIGVVEMEQPVDMEEATQAAVDHGVWLRPF------GRL 393 (422)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCe-----------eeeeccccEEEEEECCcccHHHHHHHHHHCCeEEEec------CCE
Confidence 34444444455544432110000 0123444555555543 256777888999999762 257
Q ss_pred EEEEe--cCChHHHHHHHHHHHHHHhch
Q 018172 326 ARVSM--LSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 326 ~R~s~--~~~~e~~~~~~~~l~~~~~~~ 351 (360)
+||.. ..++++++++++++.+++..+
T Consensus 394 l~~~PpL~it~~~i~~~~~~l~~al~~~ 421 (422)
T PRK05630 394 VYVMPPYITTSEQIAQICAALAAAVKAK 421 (422)
T ss_pred EEEECCccCCHHHHHHHHHHHHHHHhcc
Confidence 89865 349999999999999998754
No 315
>PRK07482 hypothetical protein; Provisional
Probab=99.43 E-value=3.5e-11 Score=115.59 Aligned_cols=270 Identities=11% Similarity=0.022 Sum_probs=163.5
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHHh-CC------------eeeeecCCc----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDYL-RS------------GLYKWDGDA---- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~---- 118 (360)
+.+++++++++++..+++.... .|.+.+.+|+.-..+|......+-.. |. .+..++.+.
T Consensus 112 ~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 191 (461)
T PRK07482 112 SKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRR 191 (461)
T ss_pred CEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccc
Confidence 4799999999999999887741 13222235888777777754332221 10 111111110
Q ss_pred ---------------cc----ccc--CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCc
Q 018172 119 ---------------NT----FDK--NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTP 171 (360)
Q Consensus 119 ---------------~~----~~~--~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~ 171 (360)
+. +.. .++.-+|++.-...-.|.+.+ +.++++|+++|+++|.||++.+. ....
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~ 271 (461)
T PRK07482 192 ADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGS 271 (461)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcc
Confidence 01 111 134556666554555677754 46788999999999999999853 2221
Q ss_pred CC--CCCCccEEEeccccccCCCCc-eEEEEeecCHHHHHHHHH-------HHhhccccCChHHHHHHHHHhcccCCCch
Q 018172 172 IT--GAADHDIMLFTLSKCTGHAGS-RIGWALVKDTEVARKMTR-------FIELGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 172 ~~--~~~~~~i~~~S~sK~~~~~G~-r~G~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
.. ...+..-=+-+++|.++ .|. .+|.+++ .+++.+.+.. .....+++.|+++..++.+.|+.+.+.
T Consensus 272 ~~a~~~~gv~PDiv~~gKgl~-gG~~Pi~av~~-~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~-- 347 (461)
T PRK07482 272 MFGSDHYGIEPDLITVAKGLT-SAYAPLSGSIV-GEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERE-- 347 (461)
T ss_pred hhhHHhcCCCCCEEEEccccc-cCccccceeee-cHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhC--
Confidence 11 11111111334689998 775 8998888 7888877752 123357789999999999999877554
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--------------hHHHHHHHH
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--------------DEDCEKLLR 307 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~l~ 307 (360)
...++.++.=...++.+.+.+.+++.+.-.. +.+.++.+.+.+ ...+...+.
T Consensus 348 ~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vr--------------G~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~ 413 (461)
T PRK07482 348 NLVGNAAEVGAYFRARLRAAFGDHPLVGEVR--------------GVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAAL 413 (461)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe--------------eceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHH
Confidence 5555555444444445544445554322122 222233332210 135667788
Q ss_pred hhCeeeeCCCCCCCCCCeEEEE--ecCChHHHHHHHHHHHHHHhch
Q 018172 308 AERIMARGGRRFGADAKYARVS--MLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 308 ~~gI~~~pg~~f~~~~~~~R~s--~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
++||.++++. ..+.+|+. +..++++++++++++.+.+.+.
T Consensus 414 ~~Gvl~~~~~----~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 414 ERGVIARAMP----HGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred HCCcEEecCC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 8999987532 13578886 4459999999999999999764
No 316
>PRK06105 aminotransferase; Provisional
Probab=99.43 E-value=4.2e-11 Score=114.98 Aligned_cols=269 Identities=10% Similarity=0.025 Sum_probs=159.7
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHHh-CCe------------eeeecCCc----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDYL-RSG------------LYKWDGDA---- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~~~---- 118 (360)
+.+++++++++++..+++.... .|.+.+.+|+.-.-+|......+-.+ +.. +..++.+.
T Consensus 110 ~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~ 189 (460)
T PRK06105 110 SKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRF 189 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCccccc
Confidence 4799999999999999887531 12111224777777776654332221 211 11111110
Q ss_pred ------------------cc-cc-c-CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccC-CCCCc
Q 018172 119 ------------------NT-FD-K-NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYW-PQYTP 171 (360)
Q Consensus 119 ------------------~~-~~-~-~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~-~~~~~ 171 (360)
+. +. . ..+..+|++.....--|...+ +.+.++|+++|+++|.||++.+ +....
T Consensus 190 ~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~ 269 (460)
T PRK06105 190 GLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGN 269 (460)
T ss_pred ccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCch
Confidence 00 10 0 124455666554555677654 4678899999999999999963 22211
Q ss_pred CC--CCCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHH-------HhhccccCChHHHHHHHHHhcccCCCch
Q 018172 172 IT--GAADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRF-------IELGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 172 ~~--~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
.. ...+..-=+.+++|.++ .| +.+|.+++ .+++.+.+... ....+++.|+++..++.+.|+.+.+.
T Consensus 270 ~f~~~~~~v~PDi~~~gK~lg-gG~~P~~av~~-~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~-- 345 (460)
T PRK06105 270 MFGCETFGIKPDILVMSKQLS-SSYQPLSAVLM-NEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEER-- 345 (460)
T ss_pred hhhHHhcCCCCCeeeeecccc-cCcccceEEEE-cHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhc--
Confidence 11 11111111557899998 66 58999998 78888887542 12356789999999999988877653
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC------------ch--HHHHHHHH
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK------------ED--EDCEKLLR 307 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~--~~~~~~l~ 307 (360)
+.+++.++.=...++.|.+. ++++.+.-. ++.+.+..+.+. .. ..+...+.
T Consensus 346 ~l~~~v~~~g~~l~~~L~~l-~~~~~v~~v--------------rG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~ 410 (460)
T PRK06105 346 DLVGNAAERGARLQARLRAL-ADHPLVGEV--------------RGVGLIAAVELVADKATKTPFEPPGKVGARANAAAH 410 (460)
T ss_pred cHHHHHHHHHHHHHHHHHHh-hcCCCeEEE--------------EecceEEEEEEecCcccCCCCCchhHHHHHHHHHHH
Confidence 44444444433333333332 334322111 122222222221 11 35667778
Q ss_pred hhCeeeeCCCCCCCCCCeEEEEec--CChHHHHHHHHHHHHHHhchhc
Q 018172 308 AERIMARGGRRFGADAKYARVSML--SREEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 308 ~~gI~~~pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~~~~ 353 (360)
++||.+.+. .+.+||+.. .++++++++++++.+++.+...
T Consensus 411 ~~Gvl~~~~------g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 411 EHGVISRAM------GDTLAFCPPLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred HCCeEEEec------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 999999872 247899853 4999999999999999987543
No 317
>PRK12403 putative aminotransferase; Provisional
Probab=99.43 E-value=7.9e-11 Score=113.08 Aligned_cols=266 Identities=12% Similarity=0.060 Sum_probs=157.1
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCc-HHHHHHhCCe-----------eeeecCCc-----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQY-PAETDYLRSG-----------LYKWDGDA----- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~-~~~~~~~g~~-----------~~~~~~~~----- 118 (360)
+.+++++++++++..+++.... .|..++..|+.-..+|... ...+...|.+ +..++.+.
T Consensus 116 ~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~ 195 (460)
T PRK12403 116 SHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANG 195 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccc
Confidence 4799999999999999888741 1221112344445555554 3333333322 11221000
Q ss_pred -------------cccc----c--CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCcC-
Q 018172 119 -------------NTFD----K--NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTPI- 172 (360)
Q Consensus 119 -------------~~~~----~--~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~~- 172 (360)
+.++ . ..+..+|++.....--|.+.+ +.+.++|+++|+++|.||++.+. .....
T Consensus 196 ~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~ 275 (460)
T PRK12403 196 GELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWF 275 (460)
T ss_pred cCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh
Confidence 0111 0 133445665544555677654 46788999999999999999742 21111
Q ss_pred C-C--CCCccEEEeccccccCCCCc-eEEEEeecCHHHHHHHHHH----HhhccccCChHHHHHHHHHhcccCCCchhHH
Q 018172 173 T-G--AADHDIMLFTLSKCTGHAGS-RIGWALVKDTEVARKMTRF----IELGSIGVSKESQLRAAKILGIVSDDYPNFF 244 (360)
Q Consensus 173 ~-~--~~~~~i~~~S~sK~~~~~G~-r~G~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 244 (360)
. . ....+++ +++|.++ .|. .+|.+++ .+++++.+... ....+++.|+.+..++.+.|+.+.+. ..+
T Consensus 276 a~e~~gv~PDiv--~~gK~lg-gG~~Piga~v~-~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~--~l~ 349 (460)
T PRK12403 276 AHEHFGFEPDTL--SIAKGLT-SGYVPMGGLVL-SKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDE--GVV 349 (460)
T ss_pred hhhhcCCCCCeE--EEccccc-ccccceEEEEE-CHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc--cHH
Confidence 1 1 1123444 4899998 784 8998888 78888887531 12356778999999999999877553 445
Q ss_pred HHHH-HHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc------------h--HHHHHHHHhh
Q 018172 245 EYGR-RLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE------------D--EDCEKLLRAE 309 (360)
Q Consensus 245 ~~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~--~~~~~~l~~~ 309 (360)
++.+ +.-...++.+.+...+++.+.-.. +.+.++.+.+.+ . ..+...+.++
T Consensus 350 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vr--------------G~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (460)
T PRK12403 350 TRVKDDTGPYLQRCLREVFGDHPLVGEVQ--------------GAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEE 415 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEeEe--------------ecceEEEEEEccCccccccccchhHHHHHHHHHHHhC
Confidence 5554 333444444444444454322222 222233332210 0 2244566789
Q ss_pred CeeeeCCCCCCCCCCeEEEEecC--ChHHHHHHHHHHHHHHhch
Q 018172 310 RIMARGGRRFGADAKYARVSMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 310 gI~~~pg~~f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
|+.+.+. .+.+|++... ++++++++++++.+++.+.
T Consensus 416 Gll~~~~------~~~~~l~Ppl~it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 416 GVIIRST------LGRMIMAPALVAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred CEEEEec------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999752 1357887644 9999999999999999775
No 318
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.43 E-value=4e-11 Score=114.62 Aligned_cols=257 Identities=14% Similarity=0.058 Sum_probs=157.4
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHHHh-CCe-------------eeeecCCc------
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETDYL-RSG-------------LYKWDGDA------ 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~~~-g~~-------------~~~~~~~~------ 118 (360)
+.+.+++++++++..+++.... .|.. +|+.-+-+|......+-.. +.. +..++.+.
T Consensus 116 ~~v~f~~SGsEA~e~AlklAr~~tgr~---~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (441)
T PRK05769 116 KKVFFTNSGTESNEAAIKIARYHTGRK---YIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPW 192 (441)
T ss_pred CEEEECCchHHHHHHHHHHHHHHhCCC---eEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccc
Confidence 5899999999999998886632 2322 3777777777765433222 211 11222110
Q ss_pred c-------------cccc--------CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCc-
Q 018172 119 N-------------TFDK--------NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTP- 171 (360)
Q Consensus 119 ~-------------~~~~--------~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~- 171 (360)
+ .++. ..+..+|++.......|...+ +.+.++|+++|+++|+||++.+.....
T Consensus 193 ~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~ 272 (441)
T PRK05769 193 GIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGK 272 (441)
T ss_pred cCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc
Confidence 0 0111 134555565544556777655 466788999999999999998421111
Q ss_pred C-C-CCC--CccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHH
Q 018172 172 I-T-GAA--DHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYG 247 (360)
Q Consensus 172 ~-~-~~~--~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (360)
. . ... ..+++ +++|.++ .|+++|++++ ++++++.+.. ....+++.+++++.++.+.|+.+. + +.
T Consensus 273 ~~a~~~~gv~pDiv--t~~K~l~-~G~p~gav~~-~~~i~~~~~~-~~~~T~~g~p~~~aaa~a~L~~l~----~---~~ 340 (441)
T PRK05769 273 MFAIEHFGVEPDII--TLAKAIA-GGLPLGAVIG-RAELMFLPPG-SHANTFGGNPVAAAAALATLEELE----E---GL 340 (441)
T ss_pred eehhhccCCCCCEE--EEccccc-CCcccEEEEE-ehhhhhcCCC-CCCCCCCcCHHHHHHHHHHHHHHH----H---HH
Confidence 1 0 111 12443 5789999 8999999998 7777654322 233466778999988888887542 1 44
Q ss_pred HHHHHHHHHHHHHHHHhc----CCcccCCCCCcccccccccCCCCCCcccccCC------ch---HHHHHHHHhhCeeee
Q 018172 248 RRLMSERWNMLRQVIRQS----GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK------ED---EDCEKLLRAERIMAR 314 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~l~~~gI~~~ 314 (360)
.+.++++-+++.+.|+++ +.+. .. .+.+.++.+.+. +. ..+.+.+.++||.+.
T Consensus 341 ~~~~~~~g~~l~~~L~~l~~~~~~~~--~v------------rg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~ 406 (441)
T PRK05769 341 LENAQKLGEYLRKELKELKEKYEFIG--DV------------RGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLL 406 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCee--ee------------ecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEe
Confidence 555556666666666544 2111 11 122223333331 11 456677778999987
Q ss_pred CCCCCCCCCCeEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 315 GGRRFGADAKYARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 315 pg~~f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
+. ..+.+||+... ++++++++++++.+++.+
T Consensus 407 ~~-----~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 407 GA-----GKSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred cC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 62 23578998655 999999999999999864
No 319
>PRK07480 putative aminotransferase; Validated
Probab=99.42 E-value=3.9e-11 Score=114.98 Aligned_cols=268 Identities=14% Similarity=0.089 Sum_probs=158.6
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHHh-CCe------------eeeecCC-----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDYL-RSG------------LYKWDGD----- 117 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~~----- 117 (360)
+.++++++++++...+++.... .|.+.+.+|+.-.-+|.......... |.. +..++.+
T Consensus 112 ~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~ 191 (456)
T PRK07480 112 NHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGE 191 (456)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCccccc
Confidence 4899999999999999887632 12221234777777776654322221 111 1111100
Q ss_pred -----c--------cccc----c--CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCcC
Q 018172 118 -----A--------NTFD----K--NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTPI 172 (360)
Q Consensus 118 -----~--------~~~~----~--~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~~ 172 (360)
. +.++ . ..+..+|++.-...-.|.+.+ +.+.++|+++|+++|.||++.+. .....
T Consensus 192 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~ 271 (456)
T PRK07480 192 GGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEW 271 (456)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcch
Confidence 0 1111 1 134556666555555677655 46788999999999999999742 22111
Q ss_pred C--CCCCccEEEeccccccCCCCc-eEEEEeecCHHHHHHHHH----HHhhccccCChHHHHHHHHHhcccCCCchhHHH
Q 018172 173 T--GAADHDIMLFTLSKCTGHAGS-RIGWALVKDTEVARKMTR----FIELGSIGVSKESQLRAAKILGIVSDDYPNFFE 245 (360)
Q Consensus 173 ~--~~~~~~i~~~S~sK~~~~~G~-r~G~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 245 (360)
. ...+..-=+.+++|.++ .|. .+|.+++ .+++++.+.. +....+++.|+++..++.+.|+.+.+. ...+
T Consensus 272 ~a~~~~gv~PDiv~~gK~l~-gG~~Pi~av~~-~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~--~l~~ 347 (456)
T PRK07480 272 FGSQHFGIKPDLMTIAKGLT-SGYIPMGAVGV-GDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDE--GIVE 347 (456)
T ss_pred hhhhhcCCCCCeeeeehhhc-cCCccceEEEE-cHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhC--CHHH
Confidence 1 11121111457799998 674 8999998 7888887731 223467889999999999999876543 4444
Q ss_pred HHH-HHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC----------c----hHHHHHHHHhhC
Q 018172 246 YGR-RLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK----------E----DEDCEKLLRAER 310 (360)
Q Consensus 246 ~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~----~~~~~~~l~~~g 310 (360)
+.+ +.=...++.+.+ +.+++.+.-. .+.+.++.+.+. + ...+...+.++|
T Consensus 348 ~~~~~~g~~l~~~l~~-l~~~~~i~~v--------------rG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 412 (456)
T PRK07480 348 RVRDDTGPYLQKRLRE-LADHPLVGEV--------------RGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANG 412 (456)
T ss_pred HHHHHHHHHHHHHHHH-hhcCCCeeeE--------------EeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCC
Confidence 442 222333333333 3334321111 122223333321 1 135666788999
Q ss_pred eeeeCCCCCCCCCCeEEEEecC--ChHHHHHHHHHHHHHHhchh
Q 018172 311 IMARGGRRFGADAKYARVSMLS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 311 I~~~pg~~f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
|.+.+. .+.+||+... ++++++++++++.+.+.+..
T Consensus 413 ll~~~~------~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~ 450 (456)
T PRK07480 413 LIMRAV------GDRMIISPPLVITHAEIDELVEKARKALDATA 450 (456)
T ss_pred cEEeec------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 998752 2478887654 99999999999999998753
No 320
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.42 E-value=2.7e-11 Score=115.11 Aligned_cols=261 Identities=10% Similarity=0.023 Sum_probs=157.8
Q ss_pred CcEEEcCChHHHHHHHHHhhcC------CCCCCCceEEEeCCCCCCcHHHHHHh-CCe-------------eeeecCCc-
Q 018172 60 RHIVIGTGSTQLYQAALYALSS------PGGPEPISVVSAAPYYSQYPAETDYL-RSG-------------LYKWDGDA- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~------~gd~~~~~vl~~~p~~~~~~~~~~~~-g~~-------------~~~~~~~~- 118 (360)
+.+++++++++++..+++.... .|. .+|+.-..+|......+-.. +-. +..++...
T Consensus 104 ~~v~f~~SGsEAve~AlklAr~~~~~~g~~r---~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~ 180 (428)
T PRK07986 104 ECVFLADSGSVAVEVAMKMALQYWQAKGEPR---QRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQS 180 (428)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCC---cEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCc
Confidence 5899999999999998887642 222 24888888887654332221 211 11111110
Q ss_pred -----------ccc----cc-CCCeeEEEEcCC-CCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCcC-C-
Q 018172 119 -----------NTF----DK-NNGAYIEVVNSP-NNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTPI-T- 173 (360)
Q Consensus 119 -----------~~~----~~-~~~~~~i~~~~p-~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~~-~- 173 (360)
+.+ .. ..+..+|++... +.-.|...+ +.+.++|+++|+++|+||++.+. ..... .
T Consensus 181 ~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~ 260 (428)
T PRK07986 181 RFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFAC 260 (428)
T ss_pred ccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeee
Confidence 011 11 123445555442 444565433 46778999999999999998642 11111 1
Q ss_pred CCC--CccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHH-----HhhccccCChHHHHHHHHHhcccCCCchhHHH
Q 018172 174 GAA--DHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRF-----IELGSIGVSKESQLRAAKILGIVSDDYPNFFE 245 (360)
Q Consensus 174 ~~~--~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 245 (360)
... ..+++ +++|.++ .| +.+|.+++ .+++.+.+... ....+++.|+++..++.+.|+.+.+. +.
T Consensus 261 ~~~gv~PDi~--t~gK~l~-gG~~p~~av~~-~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~--~~-- 332 (428)
T PRK07986 261 EHAGIAPDIL--CLGKALT-GGTMTLSATLT-TREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESG--DW-- 332 (428)
T ss_pred cccCCCCCEE--Eechhhh-CCcccCcchhc-hHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC--CH--
Confidence 111 22344 5899998 77 58888887 78888888642 13356778899999998888866543 33
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCC
Q 018172 246 YGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGAD 322 (360)
Q Consensus 246 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~ 322 (360)
+++.+++-+++.+.|+++....... .+++.+.++.+.+.+. ..+.+.+.++||++.+.
T Consensus 333 --~~~~~~~g~~l~~~l~~l~~~~~i~-----------~vRg~Gl~~~ve~~~~~~~~~~~~~l~~~Gl~~~~~------ 393 (428)
T PRK07986 333 --QQQVAAIEAQLREELAPLRDAPMVA-----------DVRVLGAIGVVETTRPVNMAALQRFFVEQGVWIRPF------ 393 (428)
T ss_pred --HHHHHHHHHHHHHHHHHHhcCCCEE-----------eEeccceEEEEEeCCcccHHHHHHHHHHCCcEEEec------
Confidence 3444444445555554431110000 1223344444544432 56777888999999873
Q ss_pred CCeEEEE--ecCChHHHHHHHHHHHHHHhc
Q 018172 323 AKYARVS--MLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 323 ~~~~R~s--~~~~~e~~~~~~~~l~~~~~~ 350 (360)
.+.+||. +..++|++++++++|.+.+..
T Consensus 394 g~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 394 GKLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 2489995 445999999999999999864
No 321
>PRK05965 hypothetical protein; Provisional
Probab=99.42 E-value=4.9e-11 Score=114.48 Aligned_cols=265 Identities=13% Similarity=0.086 Sum_probs=161.7
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHHh-CC------------eeeeecCCc----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDYL-RS------------GLYKWDGDA---- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~---- 118 (360)
+.+++++++++++..+++.... .|.+.+.+|+.-..+|......+... +. .+..++.+.
T Consensus 108 ~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (459)
T PRK05965 108 NHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRN 187 (459)
T ss_pred CEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCccccc
Confidence 4799999999999999887532 23222235888888888765332221 11 011221110
Q ss_pred ---c-----------cccc-----C-CCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCcC
Q 018172 119 ---N-----------TFDK-----N-NGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTPI 172 (360)
Q Consensus 119 ---~-----------~~~~-----~-~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~~ 172 (360)
+ .++. . ++.-+|++.-.....|.+.+ +.++++|+++|+++|.||++.+. .....
T Consensus 188 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~ 267 (459)
T PRK05965 188 PVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPL 267 (459)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchh
Confidence 0 1111 1 34566666655566677654 46788999999999999999853 22111
Q ss_pred C--CCCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHH-------HHhhccccCChHHHHHHHHHhcccCCCchh
Q 018172 173 T--GAADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTR-------FIELGSIGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 173 ~--~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
. ...+..-=+-+++|.++ .| +.+|.+++ .+++.+.+.. +....+++.|+++..++.+.|+.+.+. .
T Consensus 268 ~a~~~~gv~PDiv~~gKgl~-gG~~Pi~av~~-~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~--~ 343 (459)
T PRK05965 268 FACEAEGVVPDLMTVAKGLT-SGYVPMGAVLM-SDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEG--G 343 (459)
T ss_pred hhHhhcCCCCCeEEechhhc-cCCcceeEEEE-cHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhc--c
Confidence 1 11221122445689998 78 49999998 8898887753 223457789999999999988876553 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc---CCcccCCCCCcccccccccCCCCCCcccccCC-----------c---hHHHHHH
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQS---GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-----------E---DEDCEKL 305 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~---~~~~~~~ 305 (360)
.+++.+ +.-+++.+.|+++ +.+.- +++.+.++.+.+. + ...+...
T Consensus 344 l~~~~~----~~g~~l~~~l~~l~~~~~v~~--------------vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~ 405 (459)
T PRK05965 344 LLANGQ----KAGPRFAAGLDALRAHPLVGD--------------VRGRGLLGALELVADKATKTPFDAALDPADRIFDR 405 (459)
T ss_pred HHHHHH----HHHHHHHHHHHhhccCCCEEE--------------EeecceEEEEEEeccccccCCCCchhHHHHHHHHH
Confidence 444443 3344444444433 22111 1233333333221 0 1446677
Q ss_pred HHhhCeeeeCCCCCCCCCCeEEEEe--cCChHHHHHHHHHHHHHHhch
Q 018172 306 LRAERIMARGGRRFGADAKYARVSM--LSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 306 l~~~gI~~~pg~~f~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~~ 351 (360)
+.++||++.+. + .+.+|+.. ..++++++++++++.+.+.+.
T Consensus 406 ~~~~Gll~~~~---g--~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 406 AYANGLVFRAF---G--DGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred HHhCCeEEEec---C--CcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 78999999762 2 45788874 349999999999999999753
No 322
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.42 E-value=6.6e-11 Score=121.39 Aligned_cols=291 Identities=13% Similarity=0.054 Sum_probs=174.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEc-CChHHHHHHHHHhh----cCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIG-TGSTQLYQAALYAL----SSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYK 113 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t-~G~t~~l~~~~~~l----~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~ 113 (360)
.++.+.++++.|. + ++.+. +|++++....+..+ .++|+..+.+|++++..|......+..+|++++.
T Consensus 545 ~e~q~~l~eltG~-------d-~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~ 616 (954)
T PRK05367 545 DQLEAWLAEITGY-------D-AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVV 616 (954)
T ss_pred HHHHHHHHHHHCC-------C-CEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEE
Confidence 3445555555663 2 45554 56666654433333 2566643446999999999999999999999999
Q ss_pred ecCCccc------ccc-----CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC-CcCCCCCCccE
Q 018172 114 WDGDANT------FDK-----NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY-TPITGAADHDI 180 (360)
Q Consensus 114 ~~~~~~~------~~~-----~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~-~~~~~~~~~~i 180 (360)
++.+.++ +.. +.++.+|++++|++-.+...+ +++.++++++|+++++|.++..... ...+...+.++
T Consensus 617 v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi 696 (954)
T PRK05367 617 VACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADV 696 (954)
T ss_pred ECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCE
Confidence 9876433 211 135778888999875333344 6677777779999999999864321 22235677899
Q ss_pred EEeccccccCCC----CceEEEEeecCHHHHHHHHHHH-----h---hccccCChHHH----HHHHHHhcccCCCchhHH
Q 018172 181 MLFTLSKCTGHA----GSRIGWALVKDTEVARKMTRFI-----E---LGSIGVSKESQ----LRAAKILGIVSDDYPNFF 244 (360)
Q Consensus 181 ~~~S~sK~~~~~----G~r~G~~~~~~~~~~~~l~~~~-----~---~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~ 244 (360)
++.|.+|.|+.| |=.+|++.+ ...+...+.... . .+..+.+..+| ..+...+..+ +. +.+
T Consensus 697 ~~~s~HK~f~~P~G~GGPg~G~l~v-r~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~-G~--~Gl 772 (954)
T PRK05367 697 SHLNLHKTFCIPHGGGGPGVGPIGV-KAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMM-GA--EGL 772 (954)
T ss_pred EEecCcccCCCCcCCCCCceEEEee-cccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHH-CH--HHH
Confidence 999999987522 222677777 444444432110 0 01111122222 1122233321 22 556
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccc-cCC-----chHHHHHHHHhhCeeeeCCCC
Q 018172 245 EYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWL-ESK-----EDEDCEKLLRAERIMARGGRR 318 (360)
Q Consensus 245 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~l~~~gI~~~pg~~ 318 (360)
.+..+..-.+.+++.+.|.+.-.+.+..+.+.. + ....+.+ .++ ..+++.+.|.++|+.... ..
T Consensus 773 r~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~--~-------~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t-~~ 842 (954)
T PRK05367 773 RQATEVAILNANYIAKRLKDHYPVLYTGANGRV--A-------HECILDLRPLKESTGITVDDIAKRLIDYGFHAPT-MS 842 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCccccCCCCCc--c-------cceEEEeecccccCCCCHHHHHHHHHHCCCeEee-cC
Confidence 666666667888999999775222222221110 0 0011111 222 127788888999998654 33
Q ss_pred CCCCCCeEEEEecC--ChHHHHHHHHHHHHHHhchh
Q 018172 319 FGADAKYARVSMLS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 319 f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
|. .++.+|++.+- +++|+|++++++..+..+..
T Consensus 843 ~p-v~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~ 877 (954)
T PRK05367 843 FP-VAGTLMVEPTESESKAELDRFCDAMIAIRAEID 877 (954)
T ss_pred Cc-cCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHH
Confidence 54 36788998755 89999999999999887643
No 323
>PLN02880 tyrosine decarboxylase
Probab=99.41 E-value=3.6e-11 Score=115.98 Aligned_cols=294 Identities=12% Similarity=0.026 Sum_probs=179.4
Q ss_pred HHHHHHHHHHHh-hcCCCCCC----CCcEEEcCChHHHHHHHHHhhcC-----CC--CCCCceEEEeCCCCCCcHHHHHH
Q 018172 39 PELAEAINNLHH-VVDNAVSD----GRHIVIGTGSTQLYQAALYALSS-----PG--GPEPISVVSAAPYYSQYPAETDY 106 (360)
Q Consensus 39 ~~lr~~la~~~~-~~~~~~~~----~~~i~~t~G~t~~l~~~~~~l~~-----~g--d~~~~~vl~~~p~~~~~~~~~~~ 106 (360)
.++++.+.+|+. ..|.+-.- ...-++|+|+|+++...+....+ .| ..++..|++++-+|.++..++..
T Consensus 121 ~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~ 200 (490)
T PLN02880 121 TELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQI 200 (490)
T ss_pred HHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHH
Confidence 788888877643 44443210 02367889999997666555422 11 11123477899999999999999
Q ss_pred hCCe---eeeecCCc-c--ccccC-------------CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccC
Q 018172 107 LRSG---LYKWDGDA-N--TFDKN-------------NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYW 166 (360)
Q Consensus 107 ~g~~---~~~~~~~~-~--~~~~~-------------~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~ 166 (360)
+|+. ++.++.|. + .++.+ ..+.+|+-+..+-+||.+-| +++.++|+++|+|+++|.||++
T Consensus 201 lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg 280 (490)
T PLN02880 201 AGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAG 280 (490)
T ss_pred cCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHH
Confidence 9984 66777763 2 23221 12456666777788999988 8888999999999999999986
Q ss_pred CCCCc------CCCCCCccEEEeccccccCCCCceEEEEeecCHHH-HHHHHHHHhhcc--------------c---cCC
Q 018172 167 PQYTP------ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEV-ARKMTRFIELGS--------------I---GVS 222 (360)
Q Consensus 167 ~~~~~------~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~-~~~l~~~~~~~~--------------~---~~~ 222 (360)
..... +.+....+-+..++||.+. ....+|.++.++... .+.+.....+.. + ...
T Consensus 281 ~~~~~~~~~~~l~gie~aDSit~d~HKwl~-~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~r 359 (490)
T PLN02880 281 SACICPEYRHYIDGVEEADSFNMNAHKWFL-TNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGR 359 (490)
T ss_pred HHHhCHHHHHHhcCchhcCEEEECchhhcC-CCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCCC
Confidence 42221 2334566889999999765 777899888855432 233321111000 0 000
Q ss_pred hHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCC-CcccccccccCCCCCCcccccCC----
Q 018172 223 KESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYP-LEYCNFTGKFTNSHPGFAWLESK---- 297 (360)
Q Consensus 223 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---- 297 (360)
......+...++.+ + .+.+.+..+...+..+++.+.|++.+++++..+. ....+ ++++
T Consensus 360 r~~alklw~~l~~~-G--~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~--------------Fr~~~~~~ 422 (490)
T PLN02880 360 RFRSLKLWMVLRLY-G--VENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVC--------------FRLVPPKN 422 (490)
T ss_pred cccHHHHHHHHHHh-C--HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEE--------------EEEeCCCC
Confidence 11122222233321 2 1455555555568888999999988777776553 22222 2221
Q ss_pred c----h---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC---ChHHHHHHHHHHHHHHhch
Q 018172 298 E----D---EDCEKLLRAERIMARGGRRFGADAKYARVSMLS---REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 298 ~----~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~---~~e~~~~~~~~l~~~~~~~ 351 (360)
+ . ..+.+.|.+.|-.......+. +..++|+++.. ++++++.+++.|.++.++.
T Consensus 423 ~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~-g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~ 485 (490)
T PLN02880 423 NEDNGNKLNHDLLDAVNSSGKIFISHTVLS-GKYVLRFAVGAPLTEERHVTAAWKVLQDEASKL 485 (490)
T ss_pred ChhhHHHHHHHHHHHHHhCCCEEEEEEEEC-CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1 1 334444444544443333333 25699999855 6799999999999887653
No 324
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.41 E-value=8.4e-11 Score=109.21 Aligned_cols=278 Identities=12% Similarity=0.044 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCc-EEEcCChHHHHHHHHHhhc-CCCCCCCceEEEeCCCCCCc-H-HHHHHhCC-eeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRH-IVIGTGSTQLYQAALYALS-SPGGPEPISVVSAAPYYSQY-P-AETDYLRS-GLYK 113 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~-i~~t~G~t~~l~~~~~~l~-~~gd~~~~~vl~~~p~~~~~-~-~~~~~~g~-~~~~ 113 (360)
.++++.+.++++. + .+.+ +++++|+|.++..++..++ ++|+. +++.. .|+.- . .+++.+|+ ++..
T Consensus 42 ~e~~~~L~~l~~~---~--~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~----vLv~g-~FG~r~~~eia~~~g~~~v~~ 111 (374)
T TIGR01365 42 AEAIKKTREMLGV---P--ADYLIGIVPASDTGAVEMALWSMLGCRGVD----VLAWE-SFGKGWVTDVTKQLKLPDVRV 111 (374)
T ss_pred HHHHHHHHHHhCC---C--CCcEEEEECCchHHHHHHHHHHcCCCCCCe----EEEEC-HHHHHHHHHHHHhcCCCCcEE
Confidence 4555666666653 1 1223 5669999999999999998 47876 88764 55544 4 78888999 4666
Q ss_pred ecCCc------cccccCCCeeEEEEcCCCCCCcccchHHHHHHhhh-cCcEEEEeecccCCCCCcCCCCCCccEEEeccc
Q 018172 114 WDGDA------NTFDKNNGAYIEVVNSPNNPDGTIREAVLAKVNRS-AEGKLIHDLAYYWPQYTPITGAADHDIMLFTLS 186 (360)
Q Consensus 114 ~~~~~------~~~~~~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~-~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~s 186 (360)
++.+. +.++. + +.|++++---.||+..+- .+++++ ++.++|+|.+=+.+..+-..+ +-++++.|..
T Consensus 112 l~~~~g~~~~~~~ve~--~-~~v~~vhnETSTGv~npv--~~i~~~~~~~lliVDavSs~g~~~l~~d--~iDv~~tgsQ 184 (374)
T TIGR01365 112 LEAEYGKLPDLKKVDF--K-NDVVFTWNGTTSGVRVPN--GDFIPADREGLTICDATSAAFAQDLDYH--KLDVVTFSWQ 184 (374)
T ss_pred EcCCCCCCCCHHHcCC--C-CCEEEecCCCchheeccc--cccccccCCCcEEEEccchhcCCCCChh--HCcEEEEech
Confidence 65432 22222 1 224444433478988873 232332 589999999866543333333 3789999999
Q ss_pred cccCCCCceEEEEeecCHHHHHHHHHH---------H--------------hhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 187 KCTGHAGSRIGWALVKDTEVARKMTRF---------I--------------ELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 187 K~~~~~G~r~G~~~~~~~~~~~~l~~~---------~--------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
|.++.|+ .+++++. +++.++..... . ..+..+++.....++..+++.+.+. .-
T Consensus 185 K~L~~pp-Gls~v~v-s~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~e--gG 260 (374)
T TIGR01365 185 KVLGGEG-AHGMLIL-SPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESI--GG 260 (374)
T ss_pred hccCCCC-ceEEEEE-CHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHc--cC
Confidence 9998755 3677777 67666654421 0 1112223333444444445433221 35
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccC--C-------c-----hHHHHHHHHhh
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLES--K-------E-----DEDCEKLLRAE 309 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------~-----~~~~~~~l~~~ 309 (360)
++...++.+++.+.+++.+++.+++.+....... ++.+. ..+.+ + + ...+.+.|+++
T Consensus 261 le~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~--------rS~tv-t~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (374)
T TIGR01365 261 LKPLIARADDNLAVLEAFVAKNNWIHFLAETPEI--------RSNTS-VCLKVVDPAIDALDEDAQADFAKELISTLEKE 331 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhh--------cCCCe-EEEEeCCccccccccchhhHHHHHHHHHHHHC
Confidence 9999999999999999999999745544321111 12211 11222 1 1 35688899999
Q ss_pred CeeeeCCCCCCCCCCeEEEEe-cC-ChHHHHHHHHHHHHH
Q 018172 310 RIMARGGRRFGADAKYARVSM-LS-REEIFNIFLERLSAI 347 (360)
Q Consensus 310 gI~~~pg~~f~~~~~~~R~s~-~~-~~e~~~~~~~~l~~~ 347 (360)
||.+.+|..-- .+..+||+- .. ++++++++++.|.=+
T Consensus 332 gi~i~~G~~~~-~~~~fRIg~~G~i~~~di~~l~~~l~~~ 370 (374)
T TIGR01365 332 GVAYDIGSYRD-APSGLRIWCGATVEKSDLECLCPWLDWA 370 (374)
T ss_pred CEEEecccccc-CCCceEEecCCcCCHHHHHHHHHHHHHH
Confidence 99999876433 257899964 33 899999999988643
No 325
>PRK07046 aminotransferase; Validated
Probab=99.41 E-value=9e-11 Score=112.33 Aligned_cols=275 Identities=12% Similarity=0.027 Sum_probs=162.3
Q ss_pred CCcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHH-H-hCCe-----------------eeeecC-C
Q 018172 59 GRHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETD-Y-LRSG-----------------LYKWDG-D 117 (360)
Q Consensus 59 ~~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~-~-~g~~-----------------~~~~~~-~ 117 (360)
.+.+.+++++||+...+++.... .|.. +|+.-+-+|......+- . .+.+ +..++. |
T Consensus 130 ~~~v~F~nSGtEA~e~AlrlAR~~TGr~---~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd 206 (453)
T PRK07046 130 LPYWQVATTATDANRFVLRWARAVTGRP---KILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFND 206 (453)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHhhCCC---EEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCCC
Confidence 35899999999999998887642 2332 48877777777642211 1 1110 011110 1
Q ss_pred cccccc---CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccC----CCCCcCCCCCCccEEEecc
Q 018172 118 ANTFDK---NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYW----PQYTPITGAADHDIMLFTL 185 (360)
Q Consensus 118 ~~~~~~---~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~----~~~~~~~~~~~~~i~~~S~ 185 (360)
.+.++. ..+..+|++.-.....|.+.+ +.++++|+++|+++|.||++.+ +......+ ...++ .++
T Consensus 207 ~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~~~g-v~PDi--~t~ 283 (453)
T PRK07046 207 LAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTRAHG-LEPDF--LVV 283 (453)
T ss_pred HHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchhHHhC-CCccc--eee
Confidence 111111 234555666544444576655 4678899999999999999851 11111111 11233 368
Q ss_pred ccccCCCCceEEEEeecCHHHHHHHHHH---------HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHH
Q 018172 186 SKCTGHAGSRIGWALVKDTEVARKMTRF---------IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWN 256 (360)
Q Consensus 186 sK~~~~~G~r~G~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 256 (360)
+|.+| .|+.+|.+++ ..++++.+... ....+++.|+++..++.+.|+.+.+. +..++..+.-...++
T Consensus 284 gK~lg-gG~Pi~av~g-~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~--~~~~~~~~~g~~l~~ 359 (453)
T PRK07046 284 GKPIA-GGVPCAVYGF-SAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTE--AAYAHMLALAARLAA 359 (453)
T ss_pred hhhhc-CCCcceeeee-hHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHH
Confidence 99999 8999999988 78888887632 12346778999999999998877554 455555555555555
Q ss_pred HHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-ch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC
Q 018172 257 MLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-ED---EDCEKLLRAERIMARGGRRFGADAKYARVSMLS 332 (360)
Q Consensus 257 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~ 332 (360)
.+.+.+.+++......-.|.+..+.-. .....++...... +. ..+...+.++||.+.|. .+.++++...
T Consensus 360 ~L~~l~~~~~~~~~v~g~G~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~------~~~~~~~p~~ 432 (453)
T PRK07046 360 GLRAVIARHGLPWHVTRVGARVEFQFA-PTPPRNGAEAAAALDPELEAALHLYLLNRGVLITPF------HNMMLVCPAT 432 (453)
T ss_pred HHHHHHHhCCCCeEEEEeCcEEEEEEe-CCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEecc------cCcEEEeCCC
Confidence 555555555422212122222111000 0000011111101 11 44566677899998762 2357888767
Q ss_pred ChHHHHHHHHHHHHHHhc
Q 018172 333 REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 333 ~~e~~~~~~~~l~~~~~~ 350 (360)
++++++++++++.+.+.+
T Consensus 433 t~~did~~~~~~~~~l~~ 450 (453)
T PRK07046 433 TAADVDRLVAAFDACLGE 450 (453)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999999865
No 326
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.41 E-value=1e-10 Score=111.61 Aligned_cols=277 Identities=12% Similarity=0.064 Sum_probs=160.1
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHHH-hCCe-------------------eeeecC-C
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETDY-LRSG-------------------LYKWDG-D 117 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~~-~g~~-------------------~~~~~~-~ 117 (360)
+.+.+++++++++..+++.... .|.. +|+.-+-+|......+-. .|.. +..++. |
T Consensus 110 ~~v~f~~sGseA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 186 (428)
T PRK12389 110 EKVRFVNSGTEAVMTTIRVARAYTGRT---KIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFND 186 (428)
T ss_pred cEEEEeCCHHHHHHHHHHHHHHhhCCC---EEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCC
Confidence 5899999999999999887642 2322 477777777776543322 2211 111111 1
Q ss_pred cccccc-----CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCcC--CCCCCccEEEecc
Q 018172 118 ANTFDK-----NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTPI--TGAADHDIMLFTL 185 (360)
Q Consensus 118 ~~~~~~-----~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~~--~~~~~~~i~~~S~ 185 (360)
.+.++. ..+..+|++.......|.+.+ +.+.++|+++|+++|.||++.+...... ....+..-=+.++
T Consensus 187 ~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~PDivt~ 266 (428)
T PRK12389 187 IEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVEPDLTAL 266 (428)
T ss_pred HHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCCCCCeeee
Confidence 111111 134556666555556787765 4677899999999999999985422111 1111111113588
Q ss_pred ccccCCCCceEEEEeecCHHHHHHHHH---HHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 018172 186 SKCTGHAGSRIGWALVKDTEVARKMTR---FIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVI 262 (360)
Q Consensus 186 sK~~~~~G~r~G~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 262 (360)
+|.++ .|+.+|.+++ ++++++.+.. .....+++.|+++..++.+.|+.+.+. ...++.++.-...++.+.+..
T Consensus 267 gK~lg-gG~Pi~av~~-~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~--~l~~~~~~~g~~l~~~L~~l~ 342 (428)
T PRK12389 267 GKIIG-GGLPIGAYGG-RKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQE--GVYEKLDRLGAMLEEGILEAA 342 (428)
T ss_pred chhhc-CCCceeEEeE-HHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHH
Confidence 99998 8899999988 7888888752 223356788999999999999877553 444444444333334443333
Q ss_pred HhcCCcc-cCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHH
Q 018172 263 RQSGVFG-LPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFN 338 (360)
Q Consensus 263 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~ 338 (360)
.+++.+. +....| +..+. ........+.....++. ..+...+.++||.+.+.. .+.+.+++..++|+++
T Consensus 343 ~~~~~~~~v~r~~g-~~gi~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~~~~~~l~~t~e~id 415 (428)
T PRK12389 343 EKHGITITINRLKG-ALTVY-FTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSK-----YEAWFLTTAHTEEDIE 415 (428)
T ss_pred HhCCCCEEEEecCc-EEEEE-EeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCC-----CCCeeecCCCCHHHHH
Confidence 3343211 111111 11000 00000000000000111 456778888999998742 1234677767999999
Q ss_pred HHHHHHHHHHhc
Q 018172 339 IFLERLSAIQGG 350 (360)
Q Consensus 339 ~~~~~l~~~~~~ 350 (360)
++++++.+++.+
T Consensus 416 ~~~~~l~~~l~~ 427 (428)
T PRK12389 416 ETLEAVDRAFAQ 427 (428)
T ss_pred HHHHHHHHHHHh
Confidence 999999998864
No 327
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.41 E-value=7.5e-11 Score=120.58 Aligned_cols=274 Identities=13% Similarity=0.086 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHHHHH----hCCeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAETDY----LRSGLYK 113 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~~~----~g~~~~~ 113 (360)
-++++.++++.|. +.+++.++.++|++.+.++.++ +++|+. .+|++++..|+.+...++. .|++++.
T Consensus 151 ~~~Qt~ia~LtG~------~~anaSL~d~aTAaaea~~~a~~~~~g~~--~~VlVs~~~hP~~~~v~~t~a~~~GieV~~ 222 (993)
T PLN02414 151 LNYQTMITDLTGL------PMSNASLLDEGTAAAEAMAMCNNILKGKK--KKFLIASNCHPQTIDVCQTRADGLGLEVVV 222 (993)
T ss_pred HHHHHHHHHHhCC------ChhhEeecCChHHHHHHHHHHHhcccCCC--CEEEEcCccCHhHHHHHHHhhhhcCCEEEE
Confidence 5677888899887 6679999999999999988777 444421 2499999999998766544 5999998
Q ss_pred ecCCccccccCCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCc--CCCCCCccEEEeccccccC
Q 018172 114 WDGDANTFDKNNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTP--ITGAADHDIMLFTLSKCTG 190 (360)
Q Consensus 114 ~~~~~~~~~~~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~--~~~~~~~~i~~~S~sK~~~ 190 (360)
++.+..... +.....+++.+|| .+|.+.+ +.+.++|+++|+++++ .+... .... -++..+.++++++..|..+
T Consensus 223 v~~~~~~~~-~~~v~~vlvq~P~-~~G~v~dv~~I~~~ah~~GaL~iV-aad~l-al~~l~~pge~GADi~vgsgqKwg~ 298 (993)
T PLN02414 223 ADEKDFDYS-SGDVCGVLVQYPA-TDGEVLDYAEFVKNAHANGVKVVM-ATDLL-ALTMLKPPGEWGADIVVGSAQRFGV 298 (993)
T ss_pred ecchhhccc-cCceEEEEEecCC-CCeEEcCHHHHHHHHHHcCCEEEE-EECHH-HhcCCCCHhhccCcEEEECCCcccc
Confidence 876542211 2234455555665 5999988 6777777779999998 44332 1122 2567889999999999652
Q ss_pred CC---CceEEEEeecCHHHHHHHH-HHHhh-----------------------ccccCChHHHHHHHHHhccc----CCC
Q 018172 191 HA---GSRIGWALVKDTEVARKMT-RFIEL-----------------------GSIGVSKESQLRAAKILGIV----SDD 239 (360)
Q Consensus 191 ~~---G~r~G~~~~~~~~~~~~l~-~~~~~-----------------------~~~~~~~~~~~~~~~~l~~~----~~~ 239 (360)
+- |=+.|++.+ .+++.+.+- +.... --.+.|-.+..++.+.+... ...
T Consensus 299 P~G~GGP~aGflav-r~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~ 377 (993)
T PLN02414 299 PMGYGGPHAAFLAT-SQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGP 377 (993)
T ss_pred CCCCCCCCeeEEEE-CHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhcc
Confidence 21 223799988 666655442 11100 00122222222333322211 111
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCC
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRF 319 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f 319 (360)
.-+.++++++.++.+++.+.|...+ +.+..+. + | .-+.+++++.+.+.+.|.++||.++..
T Consensus 378 --~Gl~~Ia~ri~~la~~l~~~L~~~G-~~~~~~~--~--f---------~~vt~~~~~~~~v~~~L~~~gI~l~~~--- 438 (993)
T PLN02414 378 --EGLKTIAQRVHGLAGVFAAGLKKLG-FQVQSLP--F--F---------DTVKVKCSDADAIADAAAKVGINLRVV--- 438 (993)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHhhcC-CccCCCC--C--c---------CeEEEecCCHHHHHHHHHHCCCeeEEe---
Confidence 5577888889999999999998764 4443321 1 0 023445555577888999999977642
Q ss_pred CCCCCeEEEEecC--ChHHHHHHHHHHHH
Q 018172 320 GADAKYARVSMLS--REEIFNIFLERLSA 346 (360)
Q Consensus 320 ~~~~~~~R~s~~~--~~e~~~~~~~~l~~ 346 (360)
+ .+.+|+|+.- ++||++++++++..
T Consensus 439 ~--~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 439 D--ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred c--CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 1 4579999855 89999999999974
No 328
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.40 E-value=1.5e-10 Score=104.14 Aligned_cols=261 Identities=15% Similarity=0.155 Sum_probs=171.8
Q ss_pred cEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH---HHhC--CeeeeecCCcccccc----------CC
Q 018172 61 HIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET---DYLR--SGLYKWDGDANTFDK----------NN 125 (360)
Q Consensus 61 ~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~---~~~g--~~~~~~~~~~~~~~~----------~~ 125 (360)
+|-..|| +++...++.+|++|||+ |+-.+-.+..+..-- ...| ++++.+++|.+.... ..
T Consensus 91 nVQPhSG-s~AN~av~~All~pGDt----imgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~ 165 (413)
T COG0112 91 NVQPHSG-SQANQAVYLALLQPGDT----IMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEV 165 (413)
T ss_pred ccCCCCc-hHHHHHHHHHHcCCCCe----EecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHh
Confidence 4545555 78889999999999998 887776665554322 2222 466666777553332 35
Q ss_pred CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccC-----C-CCCcCCCCCCccEEEeccccccCCCCceEEE
Q 018172 126 GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYW-----P-QYTPITGAADHDIMLFTLSKCTGHAGSRIGW 198 (360)
Q Consensus 126 ~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~-----~-~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~ 198 (360)
++|+|+.-.-..|- ..+ +.++++|++-|.++++|.+|.. + +..|+ ...+++.+|.+|+| +|=|.|.
T Consensus 166 kPK~ii~G~SaY~r--~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~---~~AdvVTtTTHKTl--rGPrGG~ 238 (413)
T COG0112 166 KPKLIIAGGSAYSR--PIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPL---PHADVVTTTTHKTL--RGPRGGI 238 (413)
T ss_pred CCCEEEECcccccc--ccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCC---CccceEeCCcccCC--CCCCceE
Confidence 88999864432211 122 6788999999999999999973 1 22233 23789999999997 5667799
Q ss_pred EeecCHHHHHHHHHHHhhccccCChHHHHHHHH-HhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcc
Q 018172 199 ALVKDTEVARKMTRFIELGSIGVSKESQLRAAK-ILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEY 277 (360)
Q Consensus 199 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 277 (360)
|++.++++.+.+.+....+..+.+.+--.++.+ ++..... ..+++..+++.++.+.|.+.|.+.+ +.+..- +
T Consensus 239 Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~---p~fk~Ya~qVv~NAkaLAe~l~~~G-~~vvsG-g-- 311 (413)
T COG0112 239 ILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALE---PEFKEYAKQVVKNAKALAEALKERG-FKVVSG-G-- 311 (413)
T ss_pred EEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcC---hhHHHHHHHHHHHHHHHHHHHHHcC-CeEecC-C--
Confidence 998557999999886554444444333333333 3433222 5667788888888899999998874 444321 1
Q ss_pred cccccccCCCCCC-cccccCCc----hHHHHHHHHhhCeeeeC-CCCCC---C-CCCeEEEEe---c---CChHHHHHHH
Q 018172 278 CNFTGKFTNSHPG-FAWLESKE----DEDCEKLLRAERIMARG-GRRFG---A-DAKYARVSM---L---SREEIFNIFL 341 (360)
Q Consensus 278 ~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~l~~~gI~~~p-g~~f~---~-~~~~~R~s~---~---~~~e~~~~~~ 341 (360)
.-+ .+.+++.+ +..+...|.+.||.+.- +.+|+ + .+..+|+.. + ..++++++..
T Consensus 312 ----------TdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia 381 (413)
T COG0112 312 ----------TDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIA 381 (413)
T ss_pred ----------ccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHH
Confidence 111 34555542 38899999999999752 23333 2 356799975 1 2678999999
Q ss_pred HHHHHHHhc
Q 018172 342 ERLSAIQGG 350 (360)
Q Consensus 342 ~~l~~~~~~ 350 (360)
+-|.+++..
T Consensus 382 ~~I~~vl~~ 390 (413)
T COG0112 382 DLIADVLDG 390 (413)
T ss_pred HHHHHHHhc
Confidence 888888865
No 329
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.40 E-value=8.7e-11 Score=112.34 Aligned_cols=264 Identities=10% Similarity=0.037 Sum_probs=160.0
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHHh-CC------------eeeeecCCc----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDYL-RS------------GLYKWDGDA---- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~---- 118 (360)
+.|.+++++++++..+++.... .|...+.+|+.-..+|......+-.. |. .+..++.+.
T Consensus 110 ~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (445)
T PRK09221 110 DHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPE 189 (445)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccc
Confidence 5799999999999998886642 12111234887777777654332211 10 111222110
Q ss_pred ---------------ccccc-----C-CCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCc
Q 018172 119 ---------------NTFDK-----N-NGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTP 171 (360)
Q Consensus 119 ---------------~~~~~-----~-~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~ 171 (360)
+.++. + .+..+|++.......|...+ +.+.++|+++|+++|+||++.+. ....
T Consensus 190 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~ 269 (445)
T PRK09221 190 NAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGA 269 (445)
T ss_pred cccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCch
Confidence 01111 1 34556666655666788765 46788999999999999998632 1111
Q ss_pred C--CCCC--CccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHH-------HHhhccccCChHHHHHHHHHhcccCCC
Q 018172 172 I--TGAA--DHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTR-------FIELGSIGVSKESQLRAAKILGIVSDD 239 (360)
Q Consensus 172 ~--~~~~--~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (360)
. .... ..+ +.+++|.++ .| +.+|.+++ ++++++.+.. .....+++.|+++..++.+.|+.+.+.
T Consensus 270 ~~~~~~~gv~PD--i~~~gK~l~-gG~~Pi~av~~-~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~ 345 (445)
T PRK09221 270 AFAAERFGVTPD--IITFAKGLT-NGAIPMGAVIA-SDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREE 345 (445)
T ss_pred hhHHHhcCCCCC--EEEeccccc-cCcccceeeEE-cHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhc
Confidence 1 0111 113 457899997 55 67899888 7888887743 112346778899988888888866432
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--------hHHHHHHHHhhCe
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--------DEDCEKLLRAERI 311 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~gI 311 (360)
...++.+++-+++.+.|+++....... .+++.+.+..+.+.. ...+.+.+.++||
T Consensus 346 ------~l~~~~~~~g~~l~~~l~~l~~~~~v~-----------~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv 408 (445)
T PRK09221 346 ------DLFERAAELAPYFEDAVHSLKGLPHVI-----------DIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGL 408 (445)
T ss_pred ------cHHHHHHHHHHHHHHHHHhhccCCCEE-----------EEecCceEEEEEEecccccccchHHHHHHHHHHCCe
Confidence 334556666666667666552111000 011222222222211 1356677888999
Q ss_pred eeeCCCCCCCCCCeEEEEe--cCChHHHHHHHHHHHHHHhc
Q 018172 312 MARGGRRFGADAKYARVSM--LSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 312 ~~~pg~~f~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~ 350 (360)
.++++ .+.+||+. ..+++++++++++|.+++.+
T Consensus 409 ~~~~~------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~ 443 (445)
T PRK09221 409 LVRYT------GDTIALSPPLIIEKAQIDELVDALGDALRA 443 (445)
T ss_pred EEeec------CCEEEEECCccCCHHHHHHHHHHHHHHHHh
Confidence 99763 34799984 44999999999999999864
No 330
>PRK07481 hypothetical protein; Provisional
Probab=99.40 E-value=1.5e-10 Score=110.83 Aligned_cols=268 Identities=14% Similarity=0.113 Sum_probs=159.0
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHHh-CC------------eeeeecC------
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDYL-RS------------GLYKWDG------ 116 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~------ 116 (360)
+.+.+++++++++..+++.... .|.+.+.+|+.-.-+|......+-.. +- .+..++.
T Consensus 105 ~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 184 (449)
T PRK07481 105 RRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRN 184 (449)
T ss_pred CEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCccccc
Confidence 4799999999999999887642 12111224887777777754332221 11 1111211
Q ss_pred -----Cccccc-------------c-CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCc
Q 018172 117 -----DANTFD-------------K-NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTP 171 (360)
Q Consensus 117 -----~~~~~~-------------~-~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~ 171 (360)
|.+.+. . .++.-+|++.-...-.|.+.+ +.+.++|+++|+++|.||++.+. ....
T Consensus 185 ~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~ 264 (449)
T PRK07481 185 PFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGS 264 (449)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCch
Confidence 111110 0 134556666555555677644 46788999999999999998853 2111
Q ss_pred CC--CCCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHH-------HhhccccCChHHHHHHHHHhcccCCCch
Q 018172 172 IT--GAADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRF-------IELGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 172 ~~--~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
.. ...+-.-=+-+++|.++ .| +.+|.+++ .+++++.+... ....+++.|+++..++.+.|+.+.+.
T Consensus 265 ~~a~~~~gv~PDiv~~gKgl~-gG~~Pi~av~~-~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~-- 340 (449)
T PRK07481 265 WFGSRGWGVKPDIMCLAKGIT-SGYVPLGATMV-NARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVRE-- 340 (449)
T ss_pred hhHhhhcCCCCCEEEEeeccc-CCCcCceEEEE-cHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhh--
Confidence 11 11111111445689998 77 58999998 78888887532 23357788999999999988866543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC---------c---h--HHHHHHHH
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK---------E---D--EDCEKLLR 307 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~---~--~~~~~~l~ 307 (360)
..+++.++.=...++.+.+...+++.+.-. ++.+.++.+.+. + . ..+...+.
T Consensus 341 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v--------------rG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (449)
T PRK07481 341 DLPANAAKRGAYLLEGLQPLKERFELVGDV--------------RGKGLMLALDLVADKATREPIDPSKGYANAVADVAR 406 (449)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCeEEE--------------eecceEEEEEecccccccCCCCchhHHHHHHHHHHH
Confidence 444444444333333333333334321111 122223333321 0 1 45667778
Q ss_pred hhCeeeeCCCCCCCCCCeEEEEe--cCChHHHHHHHHHHHHHHhch
Q 018172 308 AERIMARGGRRFGADAKYARVSM--LSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 308 ~~gI~~~pg~~f~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~~ 351 (360)
++||.+.+. + +.+||+. ..++++++++++++.+.+.+.
T Consensus 407 ~~Gvl~~~~---g---~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 407 ENGVLVRPS---G---TKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred hCCeEEEec---C---CEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 899999873 2 3588884 449999999999999999754
No 331
>PRK07036 hypothetical protein; Provisional
Probab=99.40 E-value=5.9e-11 Score=114.09 Aligned_cols=265 Identities=12% Similarity=0.084 Sum_probs=158.9
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHHhCCe-------------eeeecCCc----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDYLRSG-------------LYKWDGDA---- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~---- 118 (360)
+.+.+++++++++..+++.... .|.+.+.+|+.-.-+|......+...... +..++.+.
T Consensus 113 ~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 192 (466)
T PRK07036 113 NHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRR 192 (466)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCccccc
Confidence 4799999999999998887521 12111124887777777765333222111 11111110
Q ss_pred -cc-----------------cc--cCCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCcC
Q 018172 119 -NT-----------------FD--KNNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTPI 172 (360)
Q Consensus 119 -~~-----------------~~--~~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~~ 172 (360)
.+ +. ...+..+|++.....-.|...+ +.+.++|+++|+++|.||++.+. .....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~ 272 (466)
T PRK07036 193 PAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHF 272 (466)
T ss_pred ccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchh
Confidence 00 10 0134556666655556677765 46788999999999999999743 22111
Q ss_pred CC---CCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHH-------HhhccccCChHHHHHHHHHhcccCCCch
Q 018172 173 TG---AADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRF-------IELGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 173 ~~---~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
.. ..+..-=+.+++|.++ .| +.+|.+++ .+++.+.+... ....+++.|+++..++.+.|+.+.+.
T Consensus 273 ~~~~~~~gv~PDivt~gK~l~-gG~~Pi~av~~-~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~-- 348 (466)
T PRK07036 273 FASEAVFGIQPDIITFAKGLT-SGYQPLGAVII-SERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMERE-- 348 (466)
T ss_pred hhhhhhcCCCCCEEEEccccc-cCccccEEEEE-cHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhC--
Confidence 11 1111111457789998 78 48999998 88998887531 22347788999999999988876543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHh---cCCcccCCCCCcccccccccCCCCCCcccccCCc--------------hHHHHH
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQ---SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--------------DEDCEK 304 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~ 304 (360)
+.+++ .+++-+++.+.|+. ++.+.- +.+.+.++.+.+.+ ...+..
T Consensus 349 ~l~~~----~~~~g~~l~~~L~~l~~~~~v~~--------------vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~ 410 (466)
T PRK07036 349 GLCEH----VREVGPYFEERLASLRELPLVGD--------------VRGDHLMACVECVADKGSKALLPEDIAIGQRIDR 410 (466)
T ss_pred CHHHH----HHHHHHHHHHHHHHhccCCCEEE--------------EEeeceEEEEEEccCccccCCCCchhHHHHHHHH
Confidence 33333 33444444444433 332111 11223333333311 145667
Q ss_pred HHHhhCeeeeCCCCCCCCCCeEEEEe--cCChHHHHHHHHHHHHHHhchh
Q 018172 305 LLRAERIMARGGRRFGADAKYARVSM--LSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 305 ~l~~~gI~~~pg~~f~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
.+.++||.+.+. .+.+||+. ..++++++++++++.+++.+..
T Consensus 411 ~~~~~Gvl~~~~------~~~~~l~Ppl~it~~~id~~~~~l~~al~~~~ 454 (466)
T PRK07036 411 HCQERGLLVRPL------EHLCVLSPPLIITRAQIDEIVAILRAAIEETA 454 (466)
T ss_pred HHHHCCcEEeec------CCEEEEeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 788999999862 24678884 4499999999999999987653
No 332
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.39 E-value=1.9e-10 Score=109.98 Aligned_cols=263 Identities=11% Similarity=0.008 Sum_probs=157.1
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHH-HhCC------------eeeeecCCc----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETD-YLRS------------GLYKWDGDA---- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~-~~g~------------~~~~~~~~~---- 118 (360)
+.+.+++++++++..+++.... .|...+.+|+.-..+|......+- ..|. .+..++...
T Consensus 107 ~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~ 186 (442)
T PRK13360 107 NHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLAR 186 (442)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhc
Confidence 4799999999999999886542 111111248888777777643221 1110 111222110
Q ss_pred ---------------ccccc------CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccC-CCCCc
Q 018172 119 ---------------NTFDK------NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYW-PQYTP 171 (360)
Q Consensus 119 ---------------~~~~~------~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~-~~~~~ 171 (360)
+.++. ..+..+|++.......|...+ +.+.++|+++|+++|+||++.+ +....
T Consensus 187 ~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~ 266 (442)
T PRK13360 187 NAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGA 266 (442)
T ss_pred cccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc
Confidence 01110 134445666555556777755 4678899999999999999953 22111
Q ss_pred CC--CCC--CccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHH-------HhhccccCChHHHHHHHHHhcccCCC
Q 018172 172 IT--GAA--DHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRF-------IELGSIGVSKESQLRAAKILGIVSDD 239 (360)
Q Consensus 172 ~~--~~~--~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (360)
.. ... ..+ +.+++|.++ .| +.+|.+++ ++++.+.+... ....+++.|+++..++.+.|+.+.+.
T Consensus 267 ~~a~~~~gv~PD--ivt~gK~l~-gG~~P~gav~~-~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~ 342 (442)
T PRK13360 267 PFAAQYFGVTPD--LLTCAKGLT-NGAIPMGAVFV-SSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYERE 342 (442)
T ss_pred chhhhhcCCCCc--eeeeeeccc-cCccceEEEEE-cHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 11 111 123 348899998 56 78999888 88888877531 12346778999999998888866543
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCCCcccccccccCCCCCCcccccCC------c--hHHHHHHHHhhC
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSGVFG-LPEYPLEYCNFTGKFTNSHPGFAWLESK------E--DEDCEKLLRAER 310 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~l~~~g 310 (360)
. ..++.+++-+++.+.|+++.... +.... +.+.+..+.+. . ...+...+.++|
T Consensus 343 --~----l~~~~~~~g~~l~~~l~~l~~~~~v~~vr------------G~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~G 404 (442)
T PRK13360 343 --G----LLTRAARLAPYWEDALHSLRDAPHVIDIR------------NLGLVGAVELAPRDGKPGKRAYEVFLKCFEKG 404 (442)
T ss_pred --C----HHHHHHHHHHHHHHHHHHhhcCCCeeeee------------ccceEEEEEEecCCCCcchhHHHHHHHHHHCC
Confidence 2 34455555555666665542111 11111 12212111111 1 135566778899
Q ss_pred eeeeCCCCCCCCCCeEEEEe--cCChHHHHHHHHHHHHHHhc
Q 018172 311 IMARGGRRFGADAKYARVSM--LSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 311 I~~~pg~~f~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~ 350 (360)
|++.++ .+.+||+. ..+++++++++++|.+++.+
T Consensus 405 vl~~~~------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~ 440 (442)
T PRK13360 405 LMIRYT------GDILALSPPLIIEEAQIDELFDILAQALKE 440 (442)
T ss_pred cEEEec------CCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 999762 24799984 45999999999999998864
No 333
>PRK06062 hypothetical protein; Provisional
Probab=99.39 E-value=1.4e-10 Score=111.02 Aligned_cols=279 Identities=12% Similarity=0.023 Sum_probs=157.1
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHHHh-CCe-----------eeeecCCc--------
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETDYL-RSG-----------LYKWDGDA-------- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~~~-g~~-----------~~~~~~~~-------- 118 (360)
+.|.++++++++...+++.... .|.. +|+.-..+|......+-.. +.. +..++.+.
T Consensus 113 ~~v~f~~SGsEAve~AlklAr~~tgr~---~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 189 (451)
T PRK06062 113 SKVFFTNGGADANEHAVRMARLHTGRP---KVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHA 189 (451)
T ss_pred CEEEEcCChHHHHHHHHHHHHHhhCCc---eEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCC
Confidence 4899999999999999887642 2322 4777777777665433322 211 11111000
Q ss_pred -c----------c----ccc--CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCC-CCcC--C
Q 018172 119 -N----------T----FDK--NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQ-YTPI--T 173 (360)
Q Consensus 119 -~----------~----~~~--~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~-~~~~--~ 173 (360)
+ . +.. ..+..+|++......-|.+.+ +.+.++|+++|+++|.||++.+.. .... .
T Consensus 190 ~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~ 269 (451)
T PRK06062 190 TTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAI 269 (451)
T ss_pred CChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHH
Confidence 0 0 000 123455666544555677755 467789999999999999998421 1111 1
Q ss_pred CCCCccEEEeccccccCCCCc-eEEEEeecCHHHHHHHHHH--HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHH
Q 018172 174 GAADHDIMLFTLSKCTGHAGS-RIGWALVKDTEVARKMTRF--IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRL 250 (360)
Q Consensus 174 ~~~~~~i~~~S~sK~~~~~G~-r~G~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (360)
...+..-=+.+++|.++ .|. .+|.+++ .+++++.+... ....+++.|+.+..++.+.|+.+.+. ..+++.++.
T Consensus 270 ~~~gv~PDi~t~gK~lg-gG~~Pigav~~-~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~--~l~~~~~~~ 345 (451)
T PRK06062 270 EHFGVVPDLITFAKGVN-SGYVPLGGVAI-SEAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEE--GIVENAARI 345 (451)
T ss_pred HhcCCCCCeeeechhhh-cCCcCcEEEEE-cHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhc--CHHHHHHHH
Confidence 11111111557899998 774 8999998 67888887532 23347788899999999988876543 333333322
Q ss_pred H-HHHHHHHHHHHHhcCCcccCCCCCcccccccccC-CCCCCcccccCCc-h-HHHHHHHHhhCeeeeCCCCCCCCCCeE
Q 018172 251 M-SERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFT-NSHPGFAWLESKE-D-EDCEKLLRAERIMARGGRRFGADAKYA 326 (360)
Q Consensus 251 ~-~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~-~~~~~~l~~~gI~~~pg~~f~~~~~~~ 326 (360)
= ...++.|.+...+++.+.-..-.|.+..+.-... .....+....... . ..+...|.++||++.+. .+.+
T Consensus 346 G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~------~~~l 419 (451)
T PRK06062 346 GAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVN------GNRI 419 (451)
T ss_pred HHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeec------CCEE
Confidence 2 1233333333333432211111222211100000 0000000000000 1 45677788999998651 3478
Q ss_pred EEEe--cCChHHHHHHHHHHHHHHhch
Q 018172 327 RVSM--LSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 327 R~s~--~~~~e~~~~~~~~l~~~~~~~ 351 (360)
||+. ..++++++++++++.+++.+.
T Consensus 420 rl~ppl~~t~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 420 HVVPPCTVTEDEVREGLAILDAALAVA 446 (451)
T ss_pred EEECCccCCHHHHHHHHHHHHHHHHHh
Confidence 9976 449999999999999999754
No 334
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.39 E-value=1.7e-10 Score=111.65 Aligned_cols=298 Identities=16% Similarity=0.126 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHh-hcCCC----------CCCCCcEEEcCChHHHHHHHHHhhcC----C-C-----------------CC
Q 018172 39 PELAEAINNLHH-VVDNA----------VSDGRHIVIGTGSTQLYQAALYALSS----P-G-----------------GP 85 (360)
Q Consensus 39 ~~lr~~la~~~~-~~~~~----------~~~~~~i~~t~G~t~~l~~~~~~l~~----~-g-----------------d~ 85 (360)
.++++.+.+++. ..+.. ......-++|+|+|+++...+....+ + | ..
T Consensus 128 t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~ 207 (522)
T TIGR03799 128 TPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGY 207 (522)
T ss_pred HHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccC
Confidence 788998888754 22110 01112357789999998776655421 1 0 01
Q ss_pred CCceEEEeCCCCCCcHHHHHHhCC---eeeeecCCccc-ccc-----------CCCeeEE--EEcCCCCCCcccch-HHH
Q 018172 86 EPISVVSAAPYYSQYPAETDYLRS---GLYKWDGDANT-FDK-----------NNGAYIE--VVNSPNNPDGTIRE-AVL 147 (360)
Q Consensus 86 ~~~~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~-~~~-----------~~~~~~i--~~~~p~NPtG~~~~-~~~ 147 (360)
.+..|++++-.|.++..+++.+|. +++.++.|.++ ++. ..+++.+ +.+..++.||.+-+ +++
T Consensus 208 ~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eI 287 (522)
T TIGR03799 208 DGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEM 287 (522)
T ss_pred CceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHH
Confidence 124589999999999999999998 78888877542 221 1234444 33455668999988 788
Q ss_pred HHHhhhcCcEEEEeecccCCCCCc------CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhh-----
Q 018172 148 AKVNRSAEGKLIHDLAYYWPQYTP------ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIEL----- 216 (360)
Q Consensus 148 ~~~~~~~~~~li~D~ay~~~~~~~------~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~----- 216 (360)
.++|+++|+|+++|.+|+...... +.+....+.+..|.+|.+. ....+|.++.++++..+.+.....+
T Consensus 288 a~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~-~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~ 366 (522)
T TIGR03799 288 ADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLY-VPMGAGMVLFKDPALMSAIEHHAEYILRKG 366 (522)
T ss_pred HHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCC-cCcccEEEEEeCHHHHHHhccCcchhcCCC
Confidence 889999999999999998643222 2233467889999999544 3345888887677766655431000
Q ss_pred --------ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCC-CcccccccccCCC
Q 018172 217 --------GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYP-LEYCNFTGKFTNS 287 (360)
Q Consensus 217 --------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~ 287 (360)
...+-+..+ ..+..+++.+.. ..++++.++..++.+++.+.|++.+++++..+. -...+|-. .+.
T Consensus 367 ~~d~~~~~legsR~~~a-l~lw~aL~~lG~---~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~--~p~ 440 (522)
T TIGR03799 367 SKDLGSHTLEGSRPGMA-MLVYAGLHIIGR---KGYELLIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYRY--VPE 440 (522)
T ss_pred CCccccceeecCcchHH-HHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEEEE--eCh
Confidence 011222222 234555654422 678899999999999999999999888876543 23333320 000
Q ss_pred CCCcccc--------cCC---ch--HHHHHHHHhhCeeeeCCC-----CC-CCCCCeEEEEecC---ChHHHHHHHHH
Q 018172 288 HPGFAWL--------ESK---ED--EDCEKLLRAERIMARGGR-----RF-GADAKYARVSMLS---REEIFNIFLER 343 (360)
Q Consensus 288 ~~~~~~~--------~~~---~~--~~~~~~l~~~gI~~~pg~-----~f-~~~~~~~R~s~~~---~~e~~~~~~~~ 343 (360)
...-... ... +. ..+.+.+.+.|....... .+ +.+...+|+++.. ++++++.+++.
T Consensus 441 ~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 441 EVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred hhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 0000000 000 11 456667777777654321 12 2123469999866 67888776653
No 335
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.39 E-value=9e-11 Score=112.60 Aligned_cols=278 Identities=13% Similarity=0.065 Sum_probs=157.8
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHH-Hh-------------CC------eeeeecC-C
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETD-YL-------------RS------GLYKWDG-D 117 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~-~~-------------g~------~~~~~~~-~ 117 (360)
+.+.++++++|+...+++.... .|.. +|+.-.-+|......+. .. |. .+..++- |
T Consensus 156 ~~v~f~~SGsEA~e~AlklAR~~tgr~---~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd 232 (474)
T PLN02482 156 EMVRFVNSGTEACMGVLRLARAYTGRE---KIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYND 232 (474)
T ss_pred CEEEEeCChHHHHHHHHHHHHHhcCCC---EEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCC
Confidence 5899999999999998887642 2322 48877777777543211 10 11 0111111 2
Q ss_pred cccccc----C-CCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCcCC--CCCCccEEEecc
Q 018172 118 ANTFDK----N-NGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTPIT--GAADHDIMLFTL 185 (360)
Q Consensus 118 ~~~~~~----~-~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~~~--~~~~~~i~~~S~ 185 (360)
.+.++. . .+..+|++.......|.+.+ +.+.++|+++|+++|+||++.+....... ...+-.-=+.++
T Consensus 233 ~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~~ga~~~~gv~PDi~t~ 312 (474)
T PLN02482 233 LEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYGGAQEYFGITPDLTTL 312 (474)
T ss_pred hHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCcchHhHHhCCCCCEEEe
Confidence 222211 1 34555666555556787765 35788999999999999998642111110 111111113578
Q ss_pred ccccCCCCceEEEEeecCHHHHHHHHHH---HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 018172 186 SKCTGHAGSRIGWALVKDTEVARKMTRF---IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVI 262 (360)
Q Consensus 186 sK~~~~~G~r~G~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 262 (360)
+|.+| .|+.+|.+++ ..++++.+... ....+++.|+++..++.+.|+.+.+. ...++..+.-...++.+.+..
T Consensus 313 gK~lg-gG~Pigav~g-~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~--~~~~~~~~~g~~l~~~L~~l~ 388 (474)
T PLN02482 313 GKVIG-GGLPVGAYGG-RREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQP--GTYEYLDKITKKLIQGILEAG 388 (474)
T ss_pred cchhh-CCCceEEEEE-cHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhcc--CHHHHHHHHHHHHHHHHHHHH
Confidence 99999 8999999987 89999888532 22356678899988888888876543 444444444444444444443
Q ss_pred HhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHH
Q 018172 263 RQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNI 339 (360)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~ 339 (360)
.+++...+....+++..+.- ......+|--....+. ..+.+.|.++||++.|.. +. .++ +++..+++++++
T Consensus 389 ~~~g~~~~~~~v~g~~gi~f-~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~-~~--~~~--psl~ht~~dId~ 462 (474)
T PLN02482 389 KKAGHEMCGGYISGMFGFFF-TEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQ-FE--AGF--TSLAHTEEDIDF 462 (474)
T ss_pred HhcCCCEEEcccceEEEEEE-ecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccC-CC--CCc--CCCCCCHHHHHH
Confidence 44321111111111111000 0000000000001121 456777788999998732 11 112 566669999999
Q ss_pred HHHHHHHHHhc
Q 018172 340 FLERLSAIQGG 350 (360)
Q Consensus 340 ~~~~l~~~~~~ 350 (360)
+++++.+++.+
T Consensus 463 ~l~al~~~l~~ 473 (474)
T PLN02482 463 TIAAAERVLAR 473 (474)
T ss_pred HHHHHHHHHHh
Confidence 99999998854
No 336
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.38 E-value=1.2e-10 Score=111.97 Aligned_cols=267 Identities=14% Similarity=0.040 Sum_probs=159.1
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHHh-CCe------------eeeecCCc----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDYL-RSG------------LYKWDGDA---- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~~~---- 118 (360)
+.+.+++++++++..+++.... .|.+.+.+|+.-..+|......+-.. |.. +..++...
T Consensus 108 ~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~ 187 (466)
T PRK07030 108 SRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLR 187 (466)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCcccc
Confidence 4899999999999999887632 12221234888887777765333322 211 11111110
Q ss_pred -----------------c-cccc-CCCeeEEEEcC-CCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCC-CCcC
Q 018172 119 -----------------N-TFDK-NNGAYIEVVNS-PNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQ-YTPI 172 (360)
Q Consensus 119 -----------------~-~~~~-~~~~~~i~~~~-p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~-~~~~ 172 (360)
+ .+.. ..+.-+|++.- ...-.|...+ +.+.++|+++|+++|.||++.+.. ....
T Consensus 188 ~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~ 267 (466)
T PRK07030 188 PEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTM 267 (466)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccc
Confidence 0 0111 13444555543 2455677654 467889999999999999987432 2111
Q ss_pred C--CCCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHH-------HHhhccccCChHHHHHHHHHhcccCCCchh
Q 018172 173 T--GAADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTR-------FIELGSIGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 173 ~--~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
. ...+-.-=+-+++|.++ .| +.+|.+++ .+++.+.+.. .....+++.|+++..++.+.|+.+.+. .
T Consensus 268 ~a~~~~gv~PDiv~~gKgl~-gG~~Pi~av~~-~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~--~ 343 (466)
T PRK07030 268 FACEQAGIRPDFLCLSKALT-GGYLPLAAVLT-TDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQD--N 343 (466)
T ss_pred hHHHhcCCCCCEEeeehhcc-CCcccceEEEe-cHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhc--C
Confidence 1 11121112345589998 78 49999998 8898887742 223467788999999999999877553 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-----------ch---HHHHHHHHh
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-----------ED---EDCEKLLRA 308 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~---~~~~~~l~~ 308 (360)
..++.++.=...++.+.+ +.+++.+.-. ++.+.++.+.+. +. ..+...+.+
T Consensus 344 l~~~~~~~G~~l~~~L~~-l~~~~~v~~v--------------rG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~ 408 (466)
T PRK07030 344 VIENNRALARRMAEATAH-LADHPHVAEV--------------RQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALE 408 (466)
T ss_pred HHHHHHHHHHHHHHHHHH-HhcCCCEEEe--------------EeceeEEEEEeccCccccccCcchhHHHHHHHHHHHH
Confidence 444444443333333332 2333321111 122223333321 11 356677888
Q ss_pred hCeeeeCCCCCCCCCCeEEEE--ecCChHHHHHHHHHHHHHHhch
Q 018172 309 ERIMARGGRRFGADAKYARVS--MLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 309 ~gI~~~pg~~f~~~~~~~R~s--~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
+|+.+.+. .+.+||. +..++++++++++++.+.+++.
T Consensus 409 ~Gvl~~~~------g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 409 RGALLRPL------GSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred CCeEEEec------CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 99999762 2478885 3449999999999999999875
No 337
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.38 E-value=9.6e-11 Score=111.43 Aligned_cols=264 Identities=11% Similarity=0.044 Sum_probs=159.2
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHH-HHHhCC-------------eeeeecCC----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAE-TDYLRS-------------GLYKWDGD---- 117 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~-~~~~g~-------------~~~~~~~~---- 117 (360)
+.+.+++++++++..+++.... .|.+.+.+|+.-..+|...... +...|- .+..++.+
T Consensus 105 ~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 184 (429)
T PRK06173 105 NKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKF 184 (429)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCccc
Confidence 5899999999999998887642 1211123588888877765322 211110 01112111
Q ss_pred --------c----ccccc-CCCeeEEEEcCC-CCCCcccch-----HHHHHHhhhcCcEEEEeecccCCC-CCcC--CC-
Q 018172 118 --------A----NTFDK-NNGAYIEVVNSP-NNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQ-YTPI--TG- 174 (360)
Q Consensus 118 --------~----~~~~~-~~~~~~i~~~~p-~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~-~~~~--~~- 174 (360)
. +.+.. ..+..+|++.-. ..-.|...+ +.+.++|+++|+++|+||++.+.. .... ..
T Consensus 185 ~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~ 264 (429)
T PRK06173 185 GEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEH 264 (429)
T ss_pred chhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHh
Confidence 0 01111 234555555542 565677644 467789999999999999996421 1111 11
Q ss_pred -CCCccEEEeccccccCCCCc-eEEEEeecCHHHHHHHHH-----HHhhccccCChHHHHHHHHHhcccCCCchhHHHHH
Q 018172 175 -AADHDIMLFTLSKCTGHAGS-RIGWALVKDTEVARKMTR-----FIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYG 247 (360)
Q Consensus 175 -~~~~~i~~~S~sK~~~~~G~-r~G~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (360)
....+++ +++|.++ .|+ .++.++. .+++.+.+.. +....+++.|+++..++.+.|+.+.+. . .
T Consensus 265 ~gv~PDiv--~~gK~l~-gG~~p~~a~~~-~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~--~----~ 334 (429)
T PRK06173 265 AGVVPDIM--CIGKALT-GGYLTLSATIT-TEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLES--P----W 334 (429)
T ss_pred cCCCCCEE--Eeehhhh-CCccccceEEe-cHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC--C----H
Confidence 1123444 4899997 774 7888887 7888888753 122345678889998888888866443 2 3
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCC
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAK 324 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~ 324 (360)
++.++++-+++.+.|++........ .+++.+.++.+.+.+. ..+.+.|.++||.+.+. .+
T Consensus 335 ~~~~~~~g~~l~~~L~~~~~~~~v~-----------~vRg~Gl~~~iel~~~~~~~~i~~~l~e~Gi~v~~~------g~ 397 (429)
T PRK06173 335 QQNIQRIEAQLKQELAPAAEFDSVA-----------EVRVLGAIGVVEMKEPVNMATLQPRFVEHGIWVRPF------GK 397 (429)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCee-----------eeeccceEEEEEeCCcccHHHHHHHHHHCCeEEEec------CC
Confidence 4445555555666665431111110 1123333444555432 56778888999999873 24
Q ss_pred eEEEEe--cCChHHHHHHHHHHHHHHhc
Q 018172 325 YARVSM--LSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 325 ~~R~s~--~~~~e~~~~~~~~l~~~~~~ 350 (360)
.+||.. ..+++++++++++|.+.+.+
T Consensus 398 ~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 398 LVYIMPPFIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred EEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 899965 34999999999999999865
No 338
>PRK06917 hypothetical protein; Provisional
Probab=99.38 E-value=2.3e-10 Score=109.48 Aligned_cols=274 Identities=11% Similarity=0.036 Sum_probs=160.8
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHH-hCCe------------eeeecCC-----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDY-LRSG------------LYKWDGD----- 117 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~-~g~~------------~~~~~~~----- 117 (360)
+.+++++++++++..+++.... .|.+.+.+|+.-+.+|......+-. .+.. +..++..
T Consensus 92 ~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 171 (447)
T PRK06917 92 NWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRC 171 (447)
T ss_pred CEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCccccc
Confidence 4789999999999999887731 1222123488877777776544332 2211 0111100
Q ss_pred ---c----------ccc----cc--CCCeeEEEEcCCCC-CCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCc
Q 018172 118 ---A----------NTF----DK--NNGAYIEVVNSPNN-PDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTP 171 (360)
Q Consensus 118 ---~----------~~~----~~--~~~~~~i~~~~p~N-PtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~ 171 (360)
. +.+ .. ..+.-+|++.-... --|.+.+ +.+.++|+++|+++|.||++.+. ....
T Consensus 172 ~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~ 251 (447)
T PRK06917 172 PVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGA 251 (447)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccc
Confidence 0 000 10 12355555543332 3345544 46778999999999999998742 1111
Q ss_pred CC--CCC--CccEEEeccccccCCCCc-eEEEEeecCHHHHHHHHHH----HhhccccCChHHHHHHHHHhcccCCCchh
Q 018172 172 IT--GAA--DHDIMLFTLSKCTGHAGS-RIGWALVKDTEVARKMTRF----IELGSIGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 172 ~~--~~~--~~~i~~~S~sK~~~~~G~-r~G~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
.. ... ..+ +.+++|.++ .|. .+|.+++ .+++++.+... ....+++.|+++..++.+.++.+.+. .
T Consensus 252 ~~a~~~~gv~PD--i~~~gK~l~-~G~~Pi~a~~~-~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~--~ 325 (447)
T PRK06917 252 MFAMEHWGVEPD--IMTLGKGLG-AGYTPIAATVV-SDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKH--N 325 (447)
T ss_pred hhhHHhcCCCCC--EEEeeehhc-cCCcceEEEEE-cHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHC--C
Confidence 11 111 123 357799998 785 8999998 78888887532 12346788999999999988866443 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-----------c---hHHHHHHHHh
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-----------E---DEDCEKLLRA 308 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~---~~~~~~~l~~ 308 (360)
.+++.++.-...++.|.+...+++.+.-.. +.+.++.+.+. + ...+...+.+
T Consensus 326 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr--------------G~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (447)
T PRK06917 326 LPEKAAEKGEYLIKGLQKVQQQSTIIGDVR--------------GKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAK 391 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEe--------------ecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHh
Confidence 444444444444444433333343222111 22223222221 1 1456677889
Q ss_pred hCeeeeCCCC-C-CCCCCeEEEEec--CChHHHHHHHHHHHHHHhchhc
Q 018172 309 ERIMARGGRR-F-GADAKYARVSML--SREEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 309 ~gI~~~pg~~-f-~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~~~~ 353 (360)
+||.+.|... . +...+.+|++.. .++++++++++++.+++.+...
T Consensus 392 ~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 440 (447)
T PRK06917 392 NGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ 440 (447)
T ss_pred CCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999987421 1 222468999754 5999999999999999987543
No 339
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.38 E-value=1.4e-10 Score=111.20 Aligned_cols=263 Identities=13% Similarity=0.017 Sum_probs=153.3
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHH-HHHHhCCe------------eeeecCC------cc
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPA-ETDYLRSG------------LYKWDGD------AN 119 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~-~~~~~g~~------------~~~~~~~------~~ 119 (360)
+.+++++++++++..+++.... .|.. +|+.-..+|..... .+...|.. +..++.. .+
T Consensus 131 ~~v~f~~sGseAve~AlklAr~~tgr~---~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (459)
T PRK06082 131 NRVLFAPGGTSAIGMALKLARHITGNF---KVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFP 207 (459)
T ss_pred CEEEECCCcHHHHHHHHHHHHHhcCCC---EEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccC
Confidence 4799999999999998887642 2222 37766666666543 33222211 1111110 00
Q ss_pred -----------ccc----cCCCeeEEEEcCCCCCCccc-ch----HHHHHHhhhcCcEEEEeecccCCCCCc-C-C-C--
Q 018172 120 -----------TFD----KNNGAYIEVVNSPNNPDGTI-RE----AVLAKVNRSAEGKLIHDLAYYWPQYTP-I-T-G-- 174 (360)
Q Consensus 120 -----------~~~----~~~~~~~i~~~~p~NPtG~~-~~----~~~~~~~~~~~~~li~D~ay~~~~~~~-~-~-~-- 174 (360)
.++ ...+..+|++.-..+. |.. .+ +.+.++|+++|+++|.||++.+..... . . .
T Consensus 208 ~~~~~~~~~~~~l~~~i~~~~~vAavIvEPv~g~-g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~ 286 (459)
T PRK06082 208 DADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNT-DVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAY 286 (459)
T ss_pred ChhHHHHHHHHHHHHHHhcCCCEEEEEECCccCC-CCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhh
Confidence 011 1124455665544443 443 33 467889999999999999988421111 1 0 1
Q ss_pred CCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHH
Q 018172 175 AADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSE 253 (360)
Q Consensus 175 ~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 253 (360)
.-..+++ +++|.++ .| +.+|.+++ .+++.+.........+++.|+++..++.+.|+.+.+. ...++.++.-..
T Consensus 287 gv~PDiv--~~gKgl~-gG~~P~~av~~-~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~--~l~~~~~~~g~~ 360 (459)
T PRK06082 287 GIEPDIL--CIGKGLG-GGLVPIAAMIT-KDKYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQE--GLLEKVKADSQF 360 (459)
T ss_pred CCCCCEE--Eeccccc-CCCCcceEEEE-cHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc--CHHHHHHHHHHH
Confidence 1123344 4899998 67 58999988 6666544321111247788999999998888866543 444444444444
Q ss_pred HHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC--------c---hHHHHHHHHhhCeeeeCCCCCCCC
Q 018172 254 RWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--------E---DEDCEKLLRAERIMARGGRRFGAD 322 (360)
Q Consensus 254 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~l~~~gI~~~pg~~f~~~ 322 (360)
.++.|.+...+++.+.-. ++.+.++.+.+. + ...+...+.++||.+.+. .
T Consensus 361 l~~~L~~l~~~~~~i~~v--------------rG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~-----~ 421 (459)
T PRK06082 361 MRERLLEMKAKYPLIGDV--------------RGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVS-----Q 421 (459)
T ss_pred HHHHHHHHHhhCCCeeee--------------eeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEec-----C
Confidence 444444433344322211 123333333331 1 134556677899998762 1
Q ss_pred CCeEEEEe--cCChHHHHHHHHHHHHHHhch
Q 018172 323 AKYARVSM--LSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 323 ~~~~R~s~--~~~~e~~~~~~~~l~~~~~~~ 351 (360)
.+.+|++. ..++++++++++++.+.+.+.
T Consensus 422 ~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~ 452 (459)
T PRK06082 422 GNVIQLSPPLIITREELTQALAILEEAIAKI 452 (459)
T ss_pred CCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 36899985 449999999999999998764
No 340
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.37 E-value=1.3e-10 Score=106.75 Aligned_cols=281 Identities=13% Similarity=0.026 Sum_probs=169.3
Q ss_pred CcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHH-hCCeee--e------ec---------CCccc-
Q 018172 60 RHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDY-LRSGLY--K------WD---------GDANT- 120 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~-~g~~~~--~------~~---------~~~~~- 120 (360)
+.|-+++++|||...+++.... -+.+.+|+.-+-||......+-. .|.-+- . ++ ++.|.
T Consensus 110 e~vrfvnSGTEAtmsAiRlARa--~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~ 187 (432)
T COG0001 110 EKVRFVNSGTEATMSAIRLARA--YTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDL 187 (432)
T ss_pred cEEEEecchhHHHHHHHHHHHH--hhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCH
Confidence 5789999999998888776631 11112388888888877655433 331111 0 11 11122
Q ss_pred --ccc-----CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCC--cCCCCCCccEEEeccc
Q 018172 121 --FDK-----NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYT--PITGAADHDIMLFTLS 186 (360)
Q Consensus 121 --~~~-----~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~--~~~~~~~~~i~~~S~s 186 (360)
++. .++.-+|++.-.-..-|.+.+ +.++++|+++|+++|.||+....... ......+-.-=+.++.
T Consensus 188 ~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlttlG 267 (432)
T COG0001 188 EALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTTLG 267 (432)
T ss_pred HHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcchhhhh
Confidence 111 135556666433334788766 46789999999999999998753322 2223333333467889
Q ss_pred cccCCCCceEEEEeecCHHHHHHHHH---HHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 018172 187 KCTGHAGSRIGWALVKDTEVARKMTR---FIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIR 263 (360)
Q Consensus 187 K~~~~~G~r~G~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 263 (360)
|+.| .|+.+|.+.+ ..++++.+.. ..+.++++.|+++..+..+.++.+.+. +...+++.+.-.+.++-+.+.+.
T Consensus 268 KiIG-GGlP~ga~gG-r~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~-~~~y~~l~~~~~~L~~gl~~~~~ 344 (432)
T COG0001 268 KIIG-GGLPIGAFGG-RAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTE-EGVYERLDALGERLAEGLRAAAE 344 (432)
T ss_pred hhhc-CCcceeeecc-HHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 9999999887 7999997743 445578889999999999988866542 02344444444444444555555
Q ss_pred hcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHH
Q 018172 264 QSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIF 340 (360)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~ 340 (360)
+++......-.+++..+.-... ...+|.-..-.+. ..+...|.++||++.|+. |. ..=+|.+.++|++++.
T Consensus 345 ~~g~~~~v~~~gsm~~i~F~~~-~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~-~e----a~flS~ahte~di~~~ 418 (432)
T COG0001 345 RHGIPLTVNRVGSMFGIFFTEE-GVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQ-FE----AGFLSTAHTEEDIDRT 418 (432)
T ss_pred HhCCCeEEeeecceEEEEecCC-CCCCHHHHHhhchHHHHHHHHHHHhCCcccCCcc-cc----ceeeecccCHHHHHHH
Confidence 5543233333444433210000 0111111111111 334558889999999854 32 1226776799999999
Q ss_pred HHHHHHHHhch
Q 018172 341 LERLSAIQGGS 351 (360)
Q Consensus 341 ~~~l~~~~~~~ 351 (360)
++++.+++++.
T Consensus 419 ~~a~~~~~~~~ 429 (432)
T COG0001 419 LEAADEAFKEL 429 (432)
T ss_pred HHHHHHHHHHh
Confidence 99999888754
No 341
>PRK06149 hypothetical protein; Provisional
Probab=99.37 E-value=3.4e-10 Score=118.01 Aligned_cols=265 Identities=15% Similarity=0.141 Sum_probs=160.9
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHHHh-CC-----e--------eeeecCC------c
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETDYL-RS-----G--------LYKWDGD------A 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~~~-g~-----~--------~~~~~~~------~ 118 (360)
+.+++++++++++..+++.... .|.. +|+..+-+|......+... +. . +..++.. .
T Consensus 642 ~~v~f~~SGsEA~e~AlklAr~~tgr~---~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~ 718 (972)
T PRK06149 642 DTVFLVNSGSEANDLAIRLAWAASGRR---DVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRF 718 (972)
T ss_pred CEEEEeCCchHHHHHHHHHHHHhcCCC---eEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcC
Confidence 4799999999999999885421 1322 3777777777544222111 10 0 1111110 0
Q ss_pred ----------cc----cc---c-CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccC-CCCCc-CC
Q 018172 119 ----------NT----FD---K-NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYW-PQYTP-IT 173 (360)
Q Consensus 119 ----------~~----~~---~-~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~-~~~~~-~~ 173 (360)
+. +. . ..+..+|++.......|.+.+ +.+.++|+++|+++|.||++.+ +.... ..
T Consensus 719 ~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~ 798 (972)
T PRK06149 719 RGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFW 798 (972)
T ss_pred CCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccch
Confidence 00 00 0 124445555444445676644 4677899999999999999963 22221 10
Q ss_pred --CCC--CccEEEeccccccCCCCceEEEEeecCHHHHHHHHHH-HhhccccCChHHHHHHHHHhcccCCCchhHHHHHH
Q 018172 174 --GAA--DHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRF-IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGR 248 (360)
Q Consensus 174 --~~~--~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 248 (360)
... .-+| -+++|.+| .|+.+|.+++ .+++++.+... ....+.+.|+.+..++.+.|+.+.+. ...++.+
T Consensus 799 a~e~~gv~PDi--vt~gK~lg-~G~Pl~av~~-~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e--~l~~~~~ 872 (972)
T PRK06149 799 GFEQQGVVPDI--ITMAKGMG-NGHPLGAVIT-RREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREE--KLQENAR 872 (972)
T ss_pred hhhhcCCCCCE--EEeccccc-CCeeeEEEEE-cHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhc--CHHHHHH
Confidence 111 2233 38899999 8899999999 88998887641 11245688999999999999877553 4444444
Q ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC--------ch---HHHHHHHHhhCeeeeCCC
Q 018172 249 RLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--------ED---EDCEKLLRAERIMARGGR 317 (360)
Q Consensus 249 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~l~~~gI~~~pg~ 317 (360)
+.=...++.|.+...+++.+... .+.|.|+.+.+. +. ..+.+.|.++||.+.+.
T Consensus 873 ~~G~~l~~~L~~l~~~~~~i~~v--------------rG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~- 937 (972)
T PRK06149 873 RVGDHLKARLEALADRHPLIGAV--------------HGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPT- 937 (972)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEE--------------eecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeec-
Confidence 44444444444444445432222 233334444331 11 45677888899999873
Q ss_pred CCCCCCCeEEEEec--CChHHHHHHHHHHHHHHhc
Q 018172 318 RFGADAKYARVSML--SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 318 ~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~ 350 (360)
+...+.+||... .++++++++++++.+++.+
T Consensus 938 --g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 938 --GDHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred --CCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 322468998653 5999999999999999864
No 342
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.36 E-value=2.1e-10 Score=109.26 Aligned_cols=286 Identities=11% Similarity=0.014 Sum_probs=168.8
Q ss_pred cHHHHHHHHHHHhhcCCC-------------------C--CCCCcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEE
Q 018172 38 VPELAEAINNLHHVVDNA-------------------V--SDGRHIVIGTGSTQLYQAALYALSS----PGGPEPISVVS 92 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~-------------------~--~~~~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~ 92 (360)
.+++.+++++.+...+.. . ..-+.+++++++++++..+++.... +|.+.+.+|+.
T Consensus 63 ~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~ 142 (427)
T TIGR00508 63 HPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLT 142 (427)
T ss_pred CHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEE
Confidence 488888888766543211 0 1114799999999999988886542 12111224888
Q ss_pred eCCCCCCcHHHHHHh-CCe-------------eeeecCCc------------cc----ccc-CCCeeEEEEcCC-CCCCc
Q 018172 93 AAPYYSQYPAETDYL-RSG-------------LYKWDGDA------------NT----FDK-NNGAYIEVVNSP-NNPDG 140 (360)
Q Consensus 93 ~~p~~~~~~~~~~~~-g~~-------------~~~~~~~~------------~~----~~~-~~~~~~i~~~~p-~NPtG 140 (360)
-+-+|......+-.+ +-. ....+... +. +.. ..+..+|++... ++--|
T Consensus 143 ~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG 222 (427)
T TIGR00508 143 IRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGG 222 (427)
T ss_pred EcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCC
Confidence 877777654332221 211 00111000 00 111 123444555432 44456
Q ss_pred ccch-----HHHHHHhhhcCcEEEEeecccCCCCCc-C--C--CCCCccEEEeccccccCCCCc-eEEEEeecCHHHHHH
Q 018172 141 TIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTP-I--T--GAADHDIMLFTLSKCTGHAGS-RIGWALVKDTEVARK 209 (360)
Q Consensus 141 ~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~-~--~--~~~~~~i~~~S~sK~~~~~G~-r~G~~~~~~~~~~~~ 209 (360)
...+ +.+.++|+++|+++|+||++.+..... . . .....+++ +++|.++ .|+ .++.++. ++++.+.
T Consensus 223 ~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~--~~gK~l~-gG~~p~~a~~~-~~~~~~~ 298 (427)
T TIGR00508 223 MRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPDIL--CVGKALT-GGYMTLSATVT-TDKVAQT 298 (427)
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCCEE--Eechhhh-cCcccceEEEE-cHHHHHH
Confidence 5543 467789999999999999986421111 0 1 11123344 4799997 775 6787877 7888888
Q ss_pred HHHHH-----hhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccccccc
Q 018172 210 MTRFI-----ELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKF 284 (360)
Q Consensus 210 l~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 284 (360)
+.... ...+++.|+++..++.+.++.+.+. + ..++++++-+++.+.|+++....... .
T Consensus 299 ~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~--~----~~~~~~~~~~~l~~~L~~l~~~~~i~-----------~ 361 (427)
T TIGR00508 299 ISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEG--E----WQKQVSAIENQLKRELSPLRKNPVVK-----------D 361 (427)
T ss_pred HhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC--C----HHHHHHHHHHHHHHHHHHhhcCCCEE-----------e
Confidence 86421 2345567889998988888866443 3 34556666666666666653211000 0
Q ss_pred CCCCCCcccccCCc---hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec--CChHHHHHHHHHHHHHHhc
Q 018172 285 TNSHPGFAWLESKE---DEDCEKLLRAERIMARGGRRFGADAKYARVSML--SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 285 ~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~ 350 (360)
+.+.+.++.+.+.+ ...+.+.|.++||.+.+. .+.+|++.. .++++++++++++.+.+.+
T Consensus 362 vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gv~~~~~------~~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 362 VRVLGAIGVVEMYKPVNVEELQKKFVEQGVWIRPF------GKLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred EeccccEEEEEECCccCHHHHHHHHHHCCeEEEec------CCEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 11223344444432 266778888999999762 236899765 5999999999999999864
No 343
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.36 E-value=3.1e-10 Score=114.24 Aligned_cols=288 Identities=15% Similarity=0.064 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEc-CChHHHHHHHHHhh----cCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIG-TGSTQLYQAALYAL----SSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYK 113 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t-~G~t~~l~~~~~~l----~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~ 113 (360)
.++.+.+++..|. + .+-+- ++++++....++++ ..+|+..+.+++++.-.|......+...|++++.
T Consensus 546 ~elq~~l~eLtGm------d--~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~ 617 (954)
T PRK12566 546 DELEAWLCAITGF------D--AICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVI 617 (954)
T ss_pred HHHHHHHHHHHCC------C--eEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEE
Confidence 4556666666664 2 23333 45666655555554 3345443346999998887777778889999999
Q ss_pred ecCCccc-ccc----------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC-CCcCCCCCCccE
Q 018172 114 WDGDANT-FDK----------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ-YTPITGAADHDI 180 (360)
Q Consensus 114 ~~~~~~~-~~~----------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~-~~~~~~~~~~~i 180 (360)
++.|.++ ++. ++++.+|.+++|++-.+...+ +++.++++++|+++++|.++.... ....+...+.++
T Consensus 618 Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi 697 (954)
T PRK12566 618 VECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADV 697 (954)
T ss_pred eccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCE
Confidence 9987443 211 257778888898875544333 567777777999999999986422 233346889999
Q ss_pred EEeccccccCCC----CceEEEEeecCHHHHHHHHHHH--h-------hcccc----CChHHHHHHHHHhcccCCCchhH
Q 018172 181 MLFTLSKCTGHA----GSRIGWALVKDTEVARKMTRFI--E-------LGSIG----VSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 181 ~~~S~sK~~~~~----G~r~G~~~~~~~~~~~~l~~~~--~-------~~~~~----~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
++++++|.|+.| |.-+|.+.. ...+...+...- . ....+ .+.....++...+..+ +. +
T Consensus 698 ~~~s~HKtf~~P~G~GGP~vG~iav-~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~l-G~--e- 772 (954)
T PRK12566 698 SHMNLHKTFCIPHGGGGPGMGPIGV-RAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMM-GP--Q- 772 (954)
T ss_pred EEecCCcccCcCccCCCCccchhhh-hhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHH-CH--H-
Confidence 999999988632 222343333 233333333210 0 01111 1122233344444432 21 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCc-ccccccccCCCCCCcccccCC-----chHHHHHHHHhhCeeeeCCC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLE-YCNFTGKFTNSHPGFAWLESK-----EDEDCEKLLRAERIMARGGR 317 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gI~~~pg~ 317 (360)
+.+....-..+..++.+.|.+.-.+.+..+.+. +..|. +.+..++ +.+++.+.|.++||...- .
T Consensus 773 Lk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~~hEfi---------i~~~~l~~~~g~~~~dvakRL~d~Gihapt-~ 842 (954)
T PRK12566 773 LADASEVAILSANYLANQLGGAFPVLYRGRNERVAHECI---------LDLRPLKAQTGISEEDVAKRLMDYGFHAPT-M 842 (954)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeEEE---------EEccccccccCCCHHHHHHHHHHCCcEEeE-E
Confidence 666666667788899999976533333211111 11111 1122222 126677777799997543 3
Q ss_pred CCCCCCCeEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 318 RFGADAKYARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 318 ~f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
.|. ..+++|++.+- +++|+|++++++..+.++
T Consensus 843 ~fP-v~~~LmIepTE~eskeEIDrf~eAL~~I~~e 876 (954)
T PRK12566 843 SFP-VPGTLMVEPTESESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred eec-cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 444 37799999855 899999999999999876
No 344
>PRK07483 hypothetical protein; Provisional
Probab=99.35 E-value=2.9e-10 Score=108.67 Aligned_cols=274 Identities=14% Similarity=0.082 Sum_probs=162.2
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHHh-CCe------------eeeecCC-----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDYL-RSG------------LYKWDGD----- 117 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~~----- 117 (360)
+.+++++++++++..+++.... .|.+.+.+|+.-+.+|......+-.. |-. +..++..
T Consensus 91 ~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~ 170 (443)
T PRK07483 91 EHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYRE 170 (443)
T ss_pred CEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccc
Confidence 4899999999999998887642 12222235777777777664332222 110 1111110
Q ss_pred c--------------cccc----c--CCCeeEEEEcCCCC-CCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCC
Q 018172 118 A--------------NTFD----K--NNGAYIEVVNSPNN-PDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYT 170 (360)
Q Consensus 118 ~--------------~~~~----~--~~~~~~i~~~~p~N-PtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~ 170 (360)
. +.++ . .++..+|++.-... --|.+.+ +.++++|+++|+++|.||++.+. ...
T Consensus 171 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG 250 (443)
T PRK07483 171 QRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTG 250 (443)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCc
Confidence 0 1111 0 13445555544332 2365544 46778999999999999998843 211
Q ss_pred cCC--CCCCccEEEeccccccCCCCc-eEEEEeecCHHHHHHHHHH----HhhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 171 PIT--GAADHDIMLFTLSKCTGHAGS-RIGWALVKDTEVARKMTRF----IELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 171 ~~~--~~~~~~i~~~S~sK~~~~~G~-r~G~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
... ...+-.-=+-+++|.++ .|+ .+|.+++ .+++.+.+... ....+++.|+++..++.+.++.+.+. ..
T Consensus 251 ~~~a~~~~gv~PDiv~~gK~l~-gG~~Pi~av~~-~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~--~l 326 (443)
T PRK07483 251 TLFACEEDGVAPDLVTIAKGLG-AGYQPIGAVLA-SDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAED--GL 326 (443)
T ss_pred HHHHHhhcCCCCCeeeehhhhc-cCccccEEEEE-cHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc--CH
Confidence 111 11111111445689998 785 8999998 78888887532 23357789999999999999877554 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-----------c--h-HHHHHHHHhh
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-----------E--D-EDCEKLLRAE 309 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~--~-~~~~~~l~~~ 309 (360)
+++.++.=...++.|.+.+++++.+.-.. +.+.++.+.+. + . ..+...+.++
T Consensus 327 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vR--------------G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (443)
T PRK07483 327 LANVRARGEQLRARLRERLGQHPHVGDIR--------------GRGLFVGVELVADRATKAPFDPALKLHARIKREAMAR 392 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeeeEe--------------ecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHC
Confidence 55555444444445544444554222111 22222222221 1 1 4567778899
Q ss_pred CeeeeCCCC-C-CCCCCeEEEEe--cCChHHHHHHHHHHHHHHhch
Q 018172 310 RIMARGGRR-F-GADAKYARVSM--LSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 310 gI~~~pg~~-f-~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~~ 351 (360)
||++.+... . +...+.+||.. ..+++++++++++|.+.+.+.
T Consensus 393 Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 393 GLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAA 438 (443)
T ss_pred CcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999987421 1 11245899964 349999999999999999753
No 345
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.35 E-value=1.8e-10 Score=109.47 Aligned_cols=275 Identities=11% Similarity=0.068 Sum_probs=159.6
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHH---H-HHhCCe----------------eeeecC-C
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAE---T-DYLRSG----------------LYKWDG-D 117 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~---~-~~~g~~----------------~~~~~~-~ 117 (360)
+.+.++++++|+...+++.... .|.. +|+.-.-+|...... . ...+-. ...++. |
T Consensus 111 ~~v~f~~SGsEA~e~AiklAr~~tgr~---~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (433)
T PRK00615 111 HKIRFVSSGTEATMTAVRLARGITGRS---IIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYND 187 (433)
T ss_pred CEEEEeCchHHHHHHHHHHHHHhhCCC---EEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCC
Confidence 4799999999999999887642 2332 377777777765411 1 111100 000110 1
Q ss_pred cccccc-----CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCcC--CC--CCCccEEEe
Q 018172 118 ANTFDK-----NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTPI--TG--AADHDIMLF 183 (360)
Q Consensus 118 ~~~~~~-----~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~~--~~--~~~~~i~~~ 183 (360)
.+.++. ..+..+|++.......|.+.+ +.+.++|+++|+++|.||++.+...... .. ....+++
T Consensus 188 ~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~~ga~~~~gv~PDi~-- 265 (433)
T PRK00615 188 FQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQGGAAAIYHVKPDIT-- 265 (433)
T ss_pred HHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccHhHHHHhcCCCCCeE--
Confidence 111111 134456666555555687765 3778899999999999999963211111 01 1123343
Q ss_pred ccccccCCCCceEEEEeecCHHHHHHHHHH---HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHH
Q 018172 184 TLSKCTGHAGSRIGWALVKDTEVARKMTRF---IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQ 260 (360)
Q Consensus 184 S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 260 (360)
+++|.+| .|+.+|++++ ++++++.+... ....+++.|+....++.+.|+.+.+. ..+++.++.-...++.+.+
T Consensus 266 ~~gK~lg-gG~p~~av~~-~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~--~~~~~~~~~g~~l~~~l~~ 341 (433)
T PRK00615 266 VYGKILG-GGLPAAAVVA-HKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQ--GFYTQLSTLEQNFLSPIEE 341 (433)
T ss_pred EEccccc-CCcceeeeee-cHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHH
Confidence 5899998 7788899998 89999888532 12345667889998888888876543 4455555554444455555
Q ss_pred HHHhcCC-cccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHH
Q 018172 261 VIRQSGV-FGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEI 336 (360)
Q Consensus 261 ~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~ 336 (360)
.+.+.+. +.... .|.+..+.-. ..+..++.-+...+. ..+...|.++||++.|.. ++ .. =+|.+.++++
T Consensus 342 ~~~~~g~~v~~~r-~G~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-~~--~~--~ls~~ht~~d 414 (433)
T PRK00615 342 MIRSQGFPVSLVR-YGSMFSFFFN-ENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSP-FE--AS--FLSSAHSMEN 414 (433)
T ss_pred HHHHcCCCeEEEe-eceEEEEEEe-CCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCcc-cc--cc--ceecCCCHHH
Confidence 5555321 22121 2222111100 001111111111122 467778888999998743 11 11 2566669999
Q ss_pred HHHHHHHHHHHHhc
Q 018172 337 FNIFLERLSAIQGG 350 (360)
Q Consensus 337 ~~~~~~~l~~~~~~ 350 (360)
++++++++.+++..
T Consensus 415 id~~~~a~~~~~~~ 428 (433)
T PRK00615 415 LDYAQNVLIDSLEK 428 (433)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999875
No 346
>PLN02590 probable tyrosine decarboxylase
Probab=99.35 E-value=5.7e-10 Score=108.04 Aligned_cols=297 Identities=11% Similarity=0.010 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHh-hcCCCCC----CCCcEEEcCChHHHHHHHHHhhcCC-----C--CCCCceEEEeCCCCCCcHHHHHH
Q 018172 39 PELAEAINNLHH-VVDNAVS----DGRHIVIGTGSTQLYQAALYALSSP-----G--GPEPISVVSAAPYYSQYPAETDY 106 (360)
Q Consensus 39 ~~lr~~la~~~~-~~~~~~~----~~~~i~~t~G~t~~l~~~~~~l~~~-----g--d~~~~~vl~~~p~~~~~~~~~~~ 106 (360)
.++++.+.+|+. ..|.+-. ....-++|+|+|+++...+....+. | ...+..|++++.+|.++..++..
T Consensus 169 t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~i 248 (539)
T PLN02590 169 TELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLI 248 (539)
T ss_pred HHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHH
Confidence 788888888753 4454421 0124677899999876665554221 1 11123477889999999999999
Q ss_pred hCC---eeeeecCCcc---ccccC-------------CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccC
Q 018172 107 LRS---GLYKWDGDAN---TFDKN-------------NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYW 166 (360)
Q Consensus 107 ~g~---~~~~~~~~~~---~~~~~-------------~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~ 166 (360)
+|+ +++.++.|.+ .++.+ ..+-+|+.+..+-+||.+=+ +++.++|+++++|+.+|.||++
T Consensus 249 lGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG 328 (539)
T PLN02590 249 GGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAG 328 (539)
T ss_pred cCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhh
Confidence 998 4777777632 23321 13456666777778999977 7888999999999999999986
Q ss_pred CCCCc------CCCCCCccEEEeccccccCCCCceEEEEeecCHH-HHHHHHHHHhhc----------------ccc-CC
Q 018172 167 PQYTP------ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTE-VARKMTRFIELG----------------SIG-VS 222 (360)
Q Consensus 167 ~~~~~------~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~-~~~~l~~~~~~~----------------~~~-~~ 222 (360)
..... +.+....+=+..+++|.+. ....+|.++.+++. +.+.+.....+. +.. .-
T Consensus 329 ~al~~~~~r~~~~Gie~ADSit~D~HK~l~-~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsR 407 (539)
T PLN02590 329 NACICPEYRKFIDGIENADSFNMNAHKWLF-ANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSR 407 (539)
T ss_pred hhhcChhhHHHhcCCccCCEEEECchhhcC-cCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCC
Confidence 32211 1233344567889999665 77788988886653 333332111000 011 11
Q ss_pred hHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCC-cccccccccCCCCCCccccc--CC--
Q 018172 223 KESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPL-EYCNFTGKFTNSHPGFAWLE--SK-- 297 (360)
Q Consensus 223 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~-- 297 (360)
......++..|+.+ + .+-+.+..++..+..+++.+.|++.+.+++..+.. ..++|- ... ..
T Consensus 408 r~raLklW~~lr~~-G--~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr-----------~~~~~~~~~ 473 (539)
T PLN02590 408 RFRSLKLWMVLRLY-G--SENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFR-----------LAPVDGDED 473 (539)
T ss_pred chHHHHHHHHHHHH-H--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEE-----------ecCCCCCHH
Confidence 22333344444432 2 26777788888888899999999998888765532 222221 110 01
Q ss_pred --ch--HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC---ChHHHHHHHHHHHHHHhch
Q 018172 298 --ED--EDCEKLLRAERIMARGGRRFGADAKYARVSMLS---REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 298 --~~--~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~---~~e~~~~~~~~l~~~~~~~ 351 (360)
+. ..+.+.|.+.|.......... +.-++|+++.. ++++++.+++.|.+...+.
T Consensus 474 ~~~~ln~~l~~~l~~~G~~~vs~t~~~-g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~ 533 (539)
T PLN02590 474 QCNERNRELLAAVNSTGKIFISHTALS-GKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKF 533 (539)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeEEC-CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 11 455556666665544333332 24589999865 7899999999999987654
No 347
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.34 E-value=3.3e-10 Score=114.66 Aligned_cols=289 Identities=13% Similarity=0.049 Sum_probs=180.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc----CCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS----SPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~----~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~ 114 (360)
.++.+.+++..|. +. --+..+|++++-...+..+. ..|+..+.+|++|.-.|......++..|++++.+
T Consensus 533 ~elq~~l~eltGm------d~-~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V 605 (939)
T TIGR00461 533 AQLEKWLCSITGF------DA-ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPV 605 (939)
T ss_pred HHHHHHHHHHHCC------CC-cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEe
Confidence 4555556666665 32 33444566666554444432 1233223459999999998888899999999999
Q ss_pred cCCcccc-cc-------C---CCeeEEEEcCCCCCCcccch--HHHHHHhhhcCcEEEEeecccC-CCCCcCCCCCCccE
Q 018172 115 DGDANTF-DK-------N---NGAYIEVVNSPNNPDGTIRE--AVLAKVNRSAEGKLIHDLAYYW-PQYTPITGAADHDI 180 (360)
Q Consensus 115 ~~~~~~~-~~-------~---~~~~~i~~~~p~NPtG~~~~--~~~~~~~~~~~~~li~D~ay~~-~~~~~~~~~~~~~i 180 (360)
+.|.++. +. + +++++|++++||| +|.+-+ +++.++++++|.++++|.++.. ......++..+.++
T Consensus 606 ~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi 684 (939)
T TIGR00461 606 NCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADV 684 (939)
T ss_pred ccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCE
Confidence 8764322 11 2 4889999999999 899877 6777888889999999999864 33344457788999
Q ss_pred EEeccccccCC----CCceEEEEeecCHHHHHHHHH--H----------Hhhc---c-ccCChHHHHHHHHHhcccCCCc
Q 018172 181 MLFTLSKCTGH----AGSRIGWALVKDTEVARKMTR--F----------IELG---S-IGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 181 ~~~S~sK~~~~----~G~r~G~~~~~~~~~~~~l~~--~----------~~~~---~-~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
+++|.+|.|+. .|=.+|++.+ ..++...+-. . +..+ + ...+......+...+..+ +.
T Consensus 685 ~~~s~HKtf~~P~G~GGPg~G~i~v-r~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~l-G~- 761 (939)
T TIGR00461 685 CHLNLHKTFCIPHGGGGPGMGPIGV-KSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMM-GN- 761 (939)
T ss_pred EEecCCccCCCCCCCCCCCeEEEEE-hhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHH-CH-
Confidence 99999996651 2223788888 4555544420 0 0000 0 112223334444445433 32
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC--------chHHHHHHHHhhCee
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--------EDEDCEKLLRAERIM 312 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~gI~ 312 (360)
+-+.++.+.-..+..++.++|.+.. .+..+.....++.. +-++++ ...++.+.|.++|+.
T Consensus 762 -~GL~~~a~~ailnAnYl~~rL~~~~--~~l~~~~~~~~~hE---------fv~~~~~~~~~~g~~~~dIakrL~d~G~h 829 (939)
T TIGR00461 762 -EGLPKASVVAILNANYMATRLKDHY--PILFVGTLKHVAHE---------CILDLRPLKAKTGIEAIDVAKRLQDYGFH 829 (939)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhhccC--cccccCCCCceeEE---------EEEeccchhhhcCCCHHHHHHHHHhCCee
Confidence 6677777777888889999998742 33222100000000 122222 128889999999997
Q ss_pred eeCCCCCCCCCCe--EEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 313 ARGGRRFGADAKY--ARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 313 ~~pg~~f~~~~~~--~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
... ..|.. .+. +|.+-+.+.+++|++++++.++-++..
T Consensus 830 apt-~~~pv-~g~lmiepTE~eskeelD~f~~al~~I~~e~~ 869 (939)
T TIGR00461 830 APT-LSFPV-PGTLMVEPTESESLEELDRFCDAMIAIKEEIN 869 (939)
T ss_pred ccc-cCCcc-CCeEEEEeeccCCHHHHHHHHHHHHHHHHHHH
Confidence 433 33432 333 555554589999999999988887643
No 348
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.34 E-value=4.1e-10 Score=103.61 Aligned_cols=279 Identities=13% Similarity=0.073 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEE-cCChHHHHHHHHHhhcCCCCCCCceEE--EeCCCCCCc-HHHHHHhCCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVI-GTGSTQLYQAALYALSSPGGPEPISVV--SAAPYYSQY-PAETDYLRSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~-t~G~t~~l~~~~~~l~~~gd~~~~~vl--~~~p~~~~~-~~~~~~~g~~~~~~ 114 (360)
.++++.+.++++. + +..+|++ .+|+|.+..++...|+.+|+. ++ +..-.|..- ...++.+| ++..+
T Consensus 52 ~~~~~~Lr~Ll~~---P--~~y~Vlfl~GggT~~~ea~~~Nll~~g~~----~~~~~~tG~fg~r~~~ea~~~g-~v~~~ 121 (364)
T PRK12462 52 AQAEADLRDLLGI---P--DEYGVVFLQGGSSLQFSMIPMNFSRPGAA----APEYVTTGYWSRKAIGEASRVA-AMRVV 121 (364)
T ss_pred HHHHHHHHHHhCC---C--CCCeEEEEeccHHHHHHHHHHHcCCCCCc----EEEEEeCCHHHHHHHHHHHhcC-CceEe
Confidence 5666666666664 1 1235654 466999999999999998985 44 444444432 34555566 44433
Q ss_pred cC----C------ccccccCCCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEec
Q 018172 115 DG----D------ANTFDKNNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFT 184 (360)
Q Consensus 115 ~~----~------~~~~~~~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S 184 (360)
.. + .+.+..+++.+.|.+++-.-.||+..++. .+.++.++|+|.+=.....+-..+.. +++..+
T Consensus 122 ~~~~~~~~~~~p~~~~~~~~~d~~~v~~t~NETstGv~~~~~----~~~~~~llvvD~sS~~~s~pid~~~~--dvi~ag 195 (364)
T PRK12462 122 WDGAASGYRTLPSLAELDWDARAPFRHYVSNETVEGLQFPDA----AGLPDSPLIADMSSDFMSRPFDVEAY--GMVYAH 195 (364)
T ss_pred cCcCCCCCCcCCCHHHhccCCCCcEEEEccCCCCceEecCcc----cccCCCeEEEEcCchhhCCCCChHHc--cEEEee
Confidence 21 1 12233345566666665444799998732 22368999999985543333222333 889999
Q ss_pred cccccCCCCceEEEEeecCHHHHHHHHHH-----------Hh-hccccCChHHHHHHHHHhcccCCCchh--HHHHHHHH
Q 018172 185 LSKCTGHAGSRIGWALVKDTEVARKMTRF-----------IE-LGSIGVSKESQLRAAKILGIVSDDYPN--FFEYGRRL 250 (360)
Q Consensus 185 ~sK~~~~~G~r~G~~~~~~~~~~~~l~~~-----------~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ 250 (360)
..|.+|+|| ++.++. .+++++...+. .. ....+++....+++..+|+.+.+ + -++.+.++
T Consensus 196 sQKnlgP~G--ltvviv-s~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~---e~GGl~~~~~r 269 (364)
T PRK12462 196 AQKNLGPAG--VTVAII-RRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRD---EIGGVHAMRDI 269 (364)
T ss_pred ccccCCCCc--eEEEEE-CHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHH---hccCHHHHHHH
Confidence 999999888 666776 67666554321 01 12225566777777778876643 3 78899999
Q ss_pred HHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEE
Q 018172 251 MSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYAR 327 (360)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R 327 (360)
-+++.+.+++.+.+.+++...... ...++.-+ +.+++++. ..+.+.++++|+.-.-|+.- -+.+|
T Consensus 270 ~~~ka~~ly~~id~~~~~~~~~~~--------~~~RS~mn-v~f~~~~~~l~~~f~~~a~~~gl~~lkGhr~---vgg~R 337 (364)
T PRK12462 270 NARKAAMLYATLDALNEVIDCHAH--------RAARSTMN-VAFRFRQPRLDTLFKEQSTEAGFCGLSGHRS---IGGIR 337 (364)
T ss_pred HHHHHHHHHHHHHhCCCcccCCCC--------hhhcCcce-EEEEcCCHHHHHHHHHHHHHCCCccccCCcc---cCceE
Confidence 999999999999998744432221 12233333 44455554 66788888999987766532 45699
Q ss_pred EEecC--ChHHHHHHHHHHHHHHhch
Q 018172 328 VSMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 328 ~s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
.|+-. +.|.++++++-++++.++.
T Consensus 338 as~yna~~~e~v~~L~~fm~~f~~~~ 363 (364)
T PRK12462 338 ASLYNAVSEQAVSRLCAFLKDFAIRH 363 (364)
T ss_pred EEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 99855 8899999999888887653
No 349
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.33 E-value=3e-10 Score=109.10 Aligned_cols=265 Identities=11% Similarity=0.021 Sum_probs=157.8
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHHh-CCe------------eeeecCC-----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDYL-RSG------------LYKWDGD----- 117 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~~----- 117 (360)
+.+++++++++++..+++.... .|.+.+.+|+.-+.+|......+-.+ |.. +..++..
T Consensus 117 ~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~ 196 (460)
T PRK06916 117 KKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRS 196 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCccccc
Confidence 4799999999999999887642 12111235888888777755433222 211 1112111
Q ss_pred -----cc--------c----ccc-CCCeeEEEEcC-CCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCcC
Q 018172 118 -----AN--------T----FDK-NNGAYIEVVNS-PNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTPI 172 (360)
Q Consensus 118 -----~~--------~----~~~-~~~~~~i~~~~-p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~~ 172 (360)
.+ . +.. ..+.-+|++.- ...-.|.+.+ +.+.++|+++|+++|.||++.+. .....
T Consensus 197 ~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~ 276 (460)
T PRK06916 197 PYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKM 276 (460)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchh
Confidence 00 0 111 13455566554 3555677654 46778999999999999998742 21111
Q ss_pred C--CCC--CccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHH-------HHhhccccCChHHHHHHHHHhcccCCCc
Q 018172 173 T--GAA--DHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTR-------FIELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 173 ~--~~~--~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
. ... .-+ +.+++|.++ .| +.+|.+++ .+++.+.+.. .....+++.|+++..++.+.++.+.+.
T Consensus 277 ~a~~~~gv~PD--iv~~gK~l~-gG~~Pi~av~~-~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~- 351 (460)
T PRK06916 277 FACEHENVTPD--IMTAGKGLT-GGYLPIAITVT-TDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKT- 351 (460)
T ss_pred hHHHhcCCCCC--eeeeehhhh-cCccccceeee-cHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhc-
Confidence 1 111 223 346789998 78 58999998 7888887642 122346778999999998888866543
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--------------hHHHHHHH
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--------------DEDCEKLL 306 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~l 306 (360)
... ++++++-+++.+.|+++....... .+.+.+.++.+.+.+ ...+...+
T Consensus 352 -~l~----~~~~~~g~~l~~~l~~l~~~~~v~-----------~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~ 415 (460)
T PRK06916 352 -NLI----EQVARKTEYVATQLEDLFALKHVG-----------DIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRS 415 (460)
T ss_pred -cHH----HHHHHHHHHHHHHHHHhhcCCCeE-----------EeecCCceeeEEeecccccccCCCchhhHHHHHHHHH
Confidence 333 344444445555554431110000 012233333332211 13566778
Q ss_pred HhhCeeeeCCCCCCCCCCeEEEE--ecCChHHHHHHHHHHHHHHhch
Q 018172 307 RAERIMARGGRRFGADAKYARVS--MLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 307 ~~~gI~~~pg~~f~~~~~~~R~s--~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
.++||.+.|. .+.+||. +..++++++++++++.+.+.+.
T Consensus 416 ~~~Gvl~~~~------g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 416 RELGMLTRPL------GNTIVFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred HHCCeEEEec------CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 8999999872 2478886 4449999999999999999754
No 350
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.33 E-value=3.4e-10 Score=101.31 Aligned_cols=273 Identities=12% Similarity=0.064 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc---CCCCCCCceEEEeCCCCCCcH-HHHHHhCCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS---SPGGPEPISVVSAAPYYSQYP-AETDYLRSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~---~~gd~~~~~vl~~~p~~~~~~-~~~~~~g~~~~~~ 114 (360)
.++.+++.+.+-. .-..++++++++||+.++++... +.-| ++--..+|.... ..+.+.|....+.
T Consensus 95 ~~~Ae~L~s~~P~------~l~~vfF~nsGsEANelal~mar~Yt~~~d-----iIa~r~~YHG~t~~t~glt~~~~~k~ 163 (442)
T KOG1404|consen 95 HDLAEALVSKLPG------DLKVVFFVNSGSEANELALKMARLYTGNLD-----IIARRNSYHGNTLYTLGLTGLSPWKQ 163 (442)
T ss_pred HHHHHHHHHhCCC------CceEEEEecCCchHHHHHHHHHHHhcCCce-----EEEeeccccCCchhhcccccCCcccc
Confidence 7788887776532 33469999999999999877652 2223 666666665544 4444444433322
Q ss_pred cCCcc--------------cc-----------------cc-----CCCeeE-EEEcCCCCCCcccch-----HHHHHHhh
Q 018172 115 DGDAN--------------TF-----------------DK-----NNGAYI-EVVNSPNNPDGTIRE-----AVLAKVNR 152 (360)
Q Consensus 115 ~~~~~--------------~~-----------------~~-----~~~~~~-i~~~~p~NPtG~~~~-----~~~~~~~~ 152 (360)
+.+.. ++ +. .+.+.+ .+...-+.--|++-. +...++|+
T Consensus 164 ~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~ 243 (442)
T KOG1404|consen 164 NFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVR 243 (442)
T ss_pred cCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHH
Confidence 21100 00 00 123333 343444444465532 56778899
Q ss_pred hcCcEEEEeecccCC-CCCcCCC--CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHH-hhccccCChHHHHH
Q 018172 153 SAEGKLIHDLAYYWP-QYTPITG--AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFI-ELGSIGVSKESQLR 228 (360)
Q Consensus 153 ~~~~~li~D~ay~~~-~~~~~~~--~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 228 (360)
++|+++|.||++.+. ....+.+ ..+.+-=+-|++|.+| .|+.+|.+++ .+++++.+.+.. .+.+++.|+++..+
T Consensus 244 k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiG-nG~Pl~AVvt-t~EIa~v~~~~~~~fnTyggnP~a~av 321 (442)
T KOG1404|consen 244 KRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIG-NGFPLGAVVT-TPEIADVLNQKSSHFNTYGGNPVACAV 321 (442)
T ss_pred HcCCEEEehhhhhccccccccccccccCCCccHHHHHhhcc-CCCcceeeec-CHHHHHHHHhccccccccCCCchhHHH
Confidence 999999999999853 2333333 3444445789999999 9999999999 899999998766 77889999999999
Q ss_pred HHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC-cccCCCCCcccccccccCCCCCCcccccCCc---------
Q 018172 229 AAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGV-FGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--------- 298 (360)
Q Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 298 (360)
+.++|+.+.++ +.++.-.+.-.++.+.|.++.. ..+.. -+++.+.++.+.+-+
T Consensus 322 g~aVL~Vikee------~LqE~aa~vG~yl~~~l~~l~d~h~iIG-----------dVRG~GLm~GvE~V~dk~~~~pp~ 384 (442)
T KOG1404|consen 322 GLAVLKVIKEE------NLQENAAEVGSYLLEKLAALKDKHPIIG-----------DVRGRGLMLGVELVSDKSEPKPPA 384 (442)
T ss_pred HHHHHHHHHHH------hHHHHHHHHHHHHHHHHHHHhhcCCcee-----------ecccceeEEEEEEecccCCCCCcc
Confidence 99999876542 3333333344444455544411 11111 122333343333211
Q ss_pred ---hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEe--cCChHHHHHHHHHH
Q 018172 299 ---DEDCEKLLRAERIMARGGRRFGADAKYARVSM--LSREEIFNIFLERL 344 (360)
Q Consensus 299 ---~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~--~~~~e~~~~~~~~l 344 (360)
...+.+..++.|+.+--|..+|. .+||+. +.++||++-+++..
T Consensus 385 ~~~~~~i~~~cke~Gvlvg~g~i~G~---vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 385 TAEGAVIGEQCKELGVLVGKGGIHGN---VFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred hHHHHHHHHHHHHhCeeeecccccce---EEEecCCeeccHHHHHHHHHHH
Confidence 15678889999999966666664 899964 45999996666644
No 351
>PRK06148 hypothetical protein; Provisional
Probab=99.32 E-value=4.8e-10 Score=117.06 Aligned_cols=267 Identities=14% Similarity=0.077 Sum_probs=164.9
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHHH-hCC------------eeeeec--------CC
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETDY-LRS------------GLYKWD--------GD 117 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~~-~g~------------~~~~~~--------~~ 117 (360)
+.+.++++++|++..+++.... .|.. +|+..+.+|......+.. .+. .+..++ ..
T Consensus 681 ~~v~f~nSGsEA~e~AlklAr~~tGr~---~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 757 (1013)
T PRK06148 681 TVAFFVNSGSEANSLALRLARAHTGQR---DAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPER 757 (1013)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhcCCC---eEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCC
Confidence 4789999999999999887743 2322 388777777766533222 110 011111 00
Q ss_pred --c--------cccc-------c-CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCc-C
Q 018172 118 --A--------NTFD-------K-NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTP-I 172 (360)
Q Consensus 118 --~--------~~~~-------~-~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~-~ 172 (360)
. +.++ . ..++.++++.....--|.+.+ +.+.++|+++|+++|.||++.+. .... .
T Consensus 758 ~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~ 837 (1013)
T PRK06148 758 WPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHW 837 (1013)
T ss_pred CChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcc
Confidence 0 0010 1 123455665544444566654 46778999999999999999743 2221 1
Q ss_pred C--CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHH-hhccccCChHHHHHHHHHhcccCCCchhHHHHHHH
Q 018172 173 T--GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFI-ELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRR 249 (360)
Q Consensus 173 ~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 249 (360)
. ...+..-=+.+++|.+| .|+.+|.+++ .+++++.+.... ...+++.|+++..++.+.++.+.+. ..+++.++
T Consensus 838 ~a~e~~gv~PDivt~gK~lg-gG~Plgav~~-~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e--~l~~~~~~ 913 (1013)
T PRK06148 838 WAFETQGVVPDIVTMGKPIG-NGHPMGAVVT-TREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDE--DLQRNALE 913 (1013)
T ss_pred hhhhhcCCCcceeeeccccc-CCcceEEEEE-cHHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhc--cHHHHHHH
Confidence 1 11222222466789999 8999999999 799988875421 2467889999999999999877654 45555555
Q ss_pred HHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC--------ch---HHHHHHHHhhCeeeeCCCC
Q 018172 250 LMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--------ED---EDCEKLLRAERIMARGGRR 318 (360)
Q Consensus 250 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~l~~~gI~~~pg~~ 318 (360)
.=...++.|.+...+++.+.- +.+.|.++.+.+. +. ..+.+.+.++||.+.+.
T Consensus 914 ~G~~l~~~L~~l~~~~~~i~~--------------VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~-- 977 (1013)
T PRK06148 914 IGNYLLAGLRELQDRFDIIGD--------------VRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTE-- 977 (1013)
T ss_pred HHHHHHHHHHHHHHhCCCceE--------------EeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEecc--
Confidence 444444444444444542211 1233334333332 11 45677788899999863
Q ss_pred CCCCCCeEEEEec--CChHHHHHHHHHHHHHHhc
Q 018172 319 FGADAKYARVSML--SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 319 f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~ 350 (360)
+...+.+||... .++++++++++++.+++.+
T Consensus 978 -g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 978 -GPHDNVLKIRPPLIFSRADADHLLEVLDDVLAA 1010 (1013)
T ss_pred -CCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 222468888653 4999999999999999864
No 352
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.32 E-value=4.3e-10 Score=108.10 Aligned_cols=266 Identities=11% Similarity=-0.014 Sum_probs=159.3
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHHh-CCe------------eeeecCCc----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDYL-RSG------------LYKWDGDA---- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~~~---- 118 (360)
+.+++++++++++..+++.... .|.+.+.+|+.-+.+|......+-.. |.. +..++...
T Consensus 130 ~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~ 209 (472)
T PRK08742 130 SKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLA 209 (472)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCcccc
Confidence 4799999999999999887632 12222235888888787765443332 211 11111110
Q ss_pred --------------c----cccc-CCCeeEEEEcC-CCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCC-CCcC
Q 018172 119 --------------N----TFDK-NNGAYIEVVNS-PNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQ-YTPI 172 (360)
Q Consensus 119 --------------~----~~~~-~~~~~~i~~~~-p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~-~~~~ 172 (360)
+ .+.. ..+.-+|++.- ..+-.|.+.+ +.+.++|+++|+++|.||++.+.. ....
T Consensus 210 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~ 289 (472)
T PRK08742 210 EPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTL 289 (472)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccc
Confidence 0 0111 13445555544 2556677654 467889999999999999988532 2111
Q ss_pred C--CCCCccEEEeccccccCCCCc-eEEEEeecCHHHHHHHHH------HHhhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 173 T--GAADHDIMLFTLSKCTGHAGS-RIGWALVKDTEVARKMTR------FIELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 173 ~--~~~~~~i~~~S~sK~~~~~G~-r~G~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
. ...+..-=+-+++|.++ .|. .+|.+++ .+++.+.+.. +....+++.|+++..++.+.++.+.+. ..
T Consensus 290 ~a~e~~gv~PDiv~~gKgl~-gG~~Plaav~~-~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~--~l 365 (472)
T PRK08742 290 FACEQAGVMPDLLCLSKGLT-GGFLPLSAVLA-TQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADD--DV 365 (472)
T ss_pred hHHHhcCCCCCEEEEccccc-CCCCCcceeec-cHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHC--CH
Confidence 1 11221222445589998 784 8999998 8888887742 123356788999999999988876553 44
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----------h----HHHHHHHHhh
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----------D----EDCEKLLRAE 309 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~----~~~~~~l~~~ 309 (360)
+++.++.=...+ .+.+.+.+++.+.-. ++.+.++.+.+.. . ..+.+.+.++
T Consensus 366 ~~~~~~~g~~l~-~~~~~~~~~~~i~dv--------------RG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (472)
T PRK08742 366 IARNQPTAARMT-QLAAQIGEHPHVADV--------------RQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALAR 430 (472)
T ss_pred HHHHHHHHHHHH-HHHHHHhcCCCeeeE--------------eccceEEEEEeccCccccccCCchhHHHHHHHHHHHHC
Confidence 444443322222 333344445422211 2333333333311 0 3456677789
Q ss_pred CeeeeCCCCCCCCCCeEEEEec--CChHHHHHHHHHHHHHHhc
Q 018172 310 RIMARGGRRFGADAKYARVSML--SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 310 gI~~~pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~ 350 (360)
||.+.+. .+.+||... .+++++++++++|.+.+.+
T Consensus 431 Gll~~~~------g~vi~~~PpL~it~~ei~~~~~~l~~~l~~ 467 (472)
T PRK08742 431 GVVLRPL------GDVLYWMPPYCVDEAQLALLADTTRHAIDE 467 (472)
T ss_pred CeEEEec------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999862 257999753 3999999999999999875
No 353
>PLN02263 serine decarboxylase
Probab=99.31 E-value=1.2e-09 Score=103.19 Aligned_cols=279 Identities=14% Similarity=0.055 Sum_probs=178.8
Q ss_pred cHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCC--CCCCCceEEEeCCCCCCcHHHHHHhCCeeeee
Q 018172 38 VPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSSP--GGPEPISVVSAAPYYSQYPAETDYLRSGLYKW 114 (360)
Q Consensus 38 ~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~--gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~ 114 (360)
..++++.+-+|+. ..|.+.... .-++|+|+|+++...+....+. ... +++++-+|.++..++..+|++++.+
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~-~G~vtsGGTEaNL~Al~aARe~~~~~v----vy~S~~aH~Sv~KAa~llgi~~~~V 205 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEY-WGYITNCGTEGNLHGILVGREVFPDGI----LYASRESHYSVFKAARMYRMECVKV 205 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCC-eEEEeCcHHHHHHHHHHHHHhhcCCcE----EEEcCCccHHHHHHHHhcCCcceEe
Confidence 3788888887753 444432221 3578999999988877776542 223 8999999999999999999999999
Q ss_pred cCCcc-cccc---------CC-CeeEEEEcCCCCCCcccch-HHHHHHhhhcCc-----EEEEeecccCCCCCc------
Q 018172 115 DGDAN-TFDK---------NN-GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEG-----KLIHDLAYYWPQYTP------ 171 (360)
Q Consensus 115 ~~~~~-~~~~---------~~-~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~-----~li~D~ay~~~~~~~------ 171 (360)
+.+.+ .++. +. ++-+|+.+..+-++|.+=+ +++.++|+++|+ |+.+|.||++...+.
T Consensus 206 p~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~ 285 (470)
T PLN02263 206 DTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPK 285 (470)
T ss_pred ccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccc
Confidence 87643 2222 21 3456677778889999977 778888888886 999999998532211
Q ss_pred CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhh-----ccccCCh--HHHHHHHHHhcccCCCchhHH
Q 018172 172 ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIEL-----GSIGVSK--ESQLRAAKILGIVSDDYPNFF 244 (360)
Q Consensus 172 ~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~-----~~~~~~~--~~~~~~~~~l~~~~~~~~~~~ 244 (360)
+......+=+..+.+|.++ .....|.++.+ ....+.+.....+ .+...+. .....++..+... + .+.+
T Consensus 286 ~df~~~vDSIsvD~HK~l~-~P~~cgvll~R-~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~-G--~~G~ 360 (470)
T PLN02263 286 VTFKKPIGSVSVSGHKFVG-CPMPCGVQITR-MEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK-G--YRGF 360 (470)
T ss_pred cCCCcCccEEEECCccccC-CCcCEEEEEEe-hhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHh-C--HHHH
Confidence 1111223345678899666 77889999885 4444443211110 1112222 2234445555532 2 2667
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCC
Q 018172 245 EYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAK 324 (360)
Q Consensus 245 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~ 324 (360)
.+..++..++.+++.+.|++.+...+..|... .+.+..+..+. ..+|-.+.+ .++
T Consensus 361 ~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s~--------------~V~f~~p~~~~-----~~~gW~L~~------~~~ 415 (470)
T PLN02263 361 QKEVQKCLRNAHYLKDRLREAGISAMLNELSS--------------TVVFERPKDEE-----FVRRWQLAC------QGN 415 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEeCCCce--------------EEEEecCchHH-----hhcceEEcc------CCC
Confidence 77777778888999999999865555544422 23333333211 123443332 245
Q ss_pred eEEEEecC--ChHHHHHHHHHHHHHHhch
Q 018172 325 YARVSMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 325 ~~R~s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
.+++++.. +.+.++++++.|++.....
T Consensus 416 ~~Hivvmphv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 416 IAHVVVMPSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred cEEEEEcCCCCHHHHHHHHHHHHHHHhhh
Confidence 78998866 7899999999999888753
No 354
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.29 E-value=2.2e-09 Score=103.03 Aligned_cols=279 Identities=11% Similarity=0.047 Sum_probs=158.4
Q ss_pred EEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHHHhCCe-------------eeeecCCc---------
Q 018172 62 IVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETDYLRSG-------------LYKWDGDA--------- 118 (360)
Q Consensus 62 i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~--------- 118 (360)
++++++++++...+++.... .|.. +|+.-..+|......+-..... +..++.+.
T Consensus 124 ~f~~~SGsEAve~AlklAr~~tgr~---~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (459)
T PRK06931 124 QFTGPSGADAVEAAIKLAKTYTGRS---NVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIG 200 (459)
T ss_pred EEeCCCcHHHHHHHHHHHHHhcCCC---eEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCC
Confidence 45668889999998887632 2322 3888888888776554432111 11121110
Q ss_pred -----ccc----cc--------CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCC-CCcCC--
Q 018172 119 -----NTF----DK--------NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQ-YTPIT-- 173 (360)
Q Consensus 119 -----~~~----~~--------~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~-~~~~~-- 173 (360)
+.+ +. .++.-+|++.-...-.|.+.+ +.+.++|+++|+++|.||++.+.. .....
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~ 280 (459)
T PRK06931 201 GEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAF 280 (459)
T ss_pred chhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHh
Confidence 000 00 123455666444444576654 467889999999999999988432 11111
Q ss_pred CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHH
Q 018172 174 GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSE 253 (360)
Q Consensus 174 ~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 253 (360)
...+-.-=+.+++|.++ .|+.+|.+++ .++ ++.+.......+++.|+++..++.+.|+.+.+. ...++.++.=..
T Consensus 281 ~~~gv~PDivt~gK~l~-gG~Pi~av~~-~~~-~~~~~~~~~~~T~~gnpla~aaala~L~~l~~~--~l~~~~~~~G~~ 355 (459)
T PRK06931 281 EHAGIEPDIIVMSKAVG-GGLPLAVLGI-KKE-FDAWQPGGHTGTFRGNQLAMATGLTTLKILKEE--NLAQNAAERGEW 355 (459)
T ss_pred hhcCCCCCEEEeccccc-CCcceeeeee-HHH-HhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhC--CHHHHHHHHHHH
Confidence 11221112456689998 7899998877 454 355543334567789999999999998876553 444555444444
Q ss_pred HHHHHHHHHHhcCCcccCCCCCcccccccccCCCCC-Ccc-cccCCch--HHHHHHHHhhCeeeeCCCCCCCCCCeEEEE
Q 018172 254 RWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHP-GFA-WLESKED--EDCEKLLRAERIMARGGRRFGADAKYARVS 329 (360)
Q Consensus 254 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~--~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s 329 (360)
.++.|.+...+++.+.-..-.|.+..+.- ...... .+. ....... ..+...+.++||.+.++... .+.+|+.
T Consensus 356 l~~~L~~l~~~~~~i~~vrG~Glm~giel-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~---~~~l~~~ 431 (459)
T PRK06931 356 LKAQLAELQKRYPCIGNVRGRGLMIGIEI-VDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRN---GNVVRLL 431 (459)
T ss_pred HHHHHHHHHHhCCCeEeEecCceEEEEEE-ccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCCC---CCEEEEE
Confidence 44445444445543222222222211100 000000 000 0000011 45666778899999874322 3578886
Q ss_pred ec--CChHHHHHHHHHHHHHHhchh
Q 018172 330 ML--SREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 330 ~~--~~~e~~~~~~~~l~~~~~~~~ 352 (360)
.. .++++++++++++.+.+.+.-
T Consensus 432 Ppl~it~~eid~~~~~l~~~l~~~~ 456 (459)
T PRK06931 432 PPLLITQAECEEFIDRFEQALLAAV 456 (459)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 53 499999999999999997643
No 355
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.28 E-value=2.9e-09 Score=101.83 Aligned_cols=263 Identities=13% Similarity=0.082 Sum_probs=153.3
Q ss_pred CcEEEcCChHHHHHHHHHhhcC--------CCC--CCCceEEEeCCCCCCcHHHHHHh-CCeee-----------eecCC
Q 018172 60 RHIVIGTGSTQLYQAALYALSS--------PGG--PEPISVVSAAPYYSQYPAETDYL-RSGLY-----------KWDGD 117 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~--------~gd--~~~~~vl~~~p~~~~~~~~~~~~-g~~~~-----------~~~~~ 117 (360)
+.|.++++++|++..+++.... .|. +.+.+|+.-..+|......+-.. |.... .++..
T Consensus 111 ~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~ 190 (443)
T PRK08297 111 PHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNP 190 (443)
T ss_pred CEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCC
Confidence 5899999999999999887731 231 01134888887777765443332 21100 01000
Q ss_pred -------ccc------------------ccc-CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccC
Q 018172 118 -------ANT------------------FDK-NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYW 166 (360)
Q Consensus 118 -------~~~------------------~~~-~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~ 166 (360)
.+. +.. ..++.+|++.-....-|.+.+ +.+.++|+++|+++|.||++.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG 270 (443)
T PRK08297 191 KLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTG 270 (443)
T ss_pred CCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhc
Confidence 000 000 134556666544444566543 4678899999999999999974
Q ss_pred CCCCc-CC--C--CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHH-----HHhhccccCChHHHHHHHHHhccc
Q 018172 167 PQYTP-IT--G--AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTR-----FIELGSIGVSKESQLRAAKILGIV 236 (360)
Q Consensus 167 ~~~~~-~~--~--~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~~ 236 (360)
..... .. . .-.-+++ +++|.++ . |.+++ ..++.+.... .....+++.|+++..++.+.++.+
T Consensus 271 fGRtG~~~a~~~~gv~PDiv--~~gK~l~-~----~a~l~-~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l 342 (443)
T PRK08297 271 VGLTGTAWAYQQLGVRPDIV--AFGKKTQ-V----CGIMA-GRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVI 342 (443)
T ss_pred cCccchHHHHHhcCCCCCEE--Eeccccc-c----cceec-chHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHH
Confidence 31111 10 1 1123344 5789875 2 33444 3343322211 123467788999999999988866
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeee
Q 018172 237 SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMA 313 (360)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~ 313 (360)
.+. ..+++.++.-+..++.+.+...+++.+.. . +++.+.++.+.+++. ..+...|.++||.+
T Consensus 343 ~~~--~l~~~~~~~g~~l~~~L~~l~~~~~~~~~-~------------vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~ 407 (443)
T PRK08297 343 EED--GLVENAARQGEYLLARLEELAAEFPAVVS-N------------VRGRGLMCAFDLPTTADRDEVIRRLWEEGVLV 407 (443)
T ss_pred Hhc--CHHHHHHHHHHHHHHHHHHHHHHCCCcce-e------------eeccceEEEEEecCHHHHHHHHHHHHHCCEEE
Confidence 543 55555555555555555554444542210 1 113334555666543 45667777899999
Q ss_pred eCCCCCCCCCCeEEEE--ecCChHHHHHHHHHHHHHHhc
Q 018172 314 RGGRRFGADAKYARVS--MLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 314 ~pg~~f~~~~~~~R~s--~~~~~e~~~~~~~~l~~~~~~ 350 (360)
.|+. ...+||+ +..++++++++++++.+++.+
T Consensus 408 ~~~~-----~~~lr~~P~l~~t~~eid~~l~~l~~~l~~ 441 (443)
T PRK08297 408 LPCG-----ERSIRFRPALTVTTEEIDAAIDALRRALPE 441 (443)
T ss_pred ecCC-----CCeEEEECCccCCHHHHHHHHHHHHHHHHh
Confidence 8742 3468884 555999999999999998864
No 356
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.28 E-value=2e-09 Score=103.42 Aligned_cols=265 Identities=14% Similarity=0.068 Sum_probs=155.8
Q ss_pred cEEEc-CChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHHHh-CC------------eeeeecCCcc------
Q 018172 61 HIVIG-TGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETDYL-RS------------GLYKWDGDAN------ 119 (360)
Q Consensus 61 ~i~~t-~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~------ 119 (360)
.++++ ++++++...+++.... +|.. +|+.-..+|......+... |. .+..++.+.+
T Consensus 128 ~v~f~~~SGSEAve~AlklAr~~tgr~---~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 204 (464)
T PRK06938 128 KIQFCGPTGTDAVEAALKLVKTATGRS---TVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFG 204 (464)
T ss_pred eEEEeCCCcHHHHHHHHHHHHHhhCCC---eEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCcccccccc
Confidence 46554 6889999999887642 2322 4887777777765443332 21 1112221110
Q ss_pred ------------cccc---C-----CCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCC-CCcCC
Q 018172 120 ------------TFDK---N-----NGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQ-YTPIT 173 (360)
Q Consensus 120 ------------~~~~---~-----~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~-~~~~~ 173 (360)
.++. + .+.-+|++.-...--|.+.+ +.+.++|+++|+++|.||++.+.. .....
T Consensus 205 ~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~ 284 (464)
T PRK06938 205 LGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMF 284 (464)
T ss_pred CchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHH
Confidence 0000 0 13455555443444576654 467889999999999999988532 21111
Q ss_pred --CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 174 --GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 174 --~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
...+..-=+.+++|.++ .|+.+|.+++ .+++ +.+.......+++.|+++..++.+.|+.+.+. +..++.++.=
T Consensus 285 a~e~~gv~PDiv~~gKglg-gG~PlsAv~~-~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~--~l~~~~~~~G 359 (464)
T PRK06938 285 AFEHAGIIPDVVVLSKAIG-GSLPLAVVVY-REWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKEH--RLAEHAAAMG 359 (464)
T ss_pred HHHhcCCCCCEEEeecccc-CCCceEEEee-hhHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHHh--HHHHHHHHHH
Confidence 11221122445589998 7899999998 5554 54433334467789999999999998876543 4444444444
Q ss_pred HHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC--------------c-h--HHHHHHHHhhCeeee
Q 018172 252 SERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--------------E-D--EDCEKLLRAERIMAR 314 (360)
Q Consensus 252 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~-~--~~~~~~l~~~gI~~~ 314 (360)
...++.+.+...+++.+.-+. +.+.++.+.+. + . ..+...+.++||.+.
T Consensus 360 ~~l~~~L~~l~~~~~~i~~Vr--------------G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~ 425 (464)
T PRK06938 360 ERLREHLRQLQRDYPQLGDVR--------------GRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILE 425 (464)
T ss_pred HHHHHHHHHHHHhCCCeeeee--------------ccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEe
Confidence 444444444334454322222 22222222221 1 1 445667778999998
Q ss_pred CCCCCCCCCCeEEEE--ecCChHHHHHHHHHHHHHHhc
Q 018172 315 GGRRFGADAKYARVS--MLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 315 pg~~f~~~~~~~R~s--~~~~~e~~~~~~~~l~~~~~~ 350 (360)
++..+ .+.+||. +..++++++++++++.+++.+
T Consensus 426 ~~g~~---~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 426 LGGRH---GSVVRFLPPLIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred ecCCC---CCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 74322 3578985 444999999999999999865
No 357
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.26 E-value=6.4e-10 Score=103.50 Aligned_cols=298 Identities=11% Similarity=0.042 Sum_probs=170.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc----CCCCCCCceEEEeCCCCCCcHHHHHHhCC-ee--
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS----SPGGPEPISVVSAAPYYSQYPAETDYLRS-GL-- 111 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~----~~gd~~~~~vl~~~p~~~~~~~~~~~~g~-~~-- 111 (360)
.+|-+.|++.... ..-++|++|+|+++++..+++..+ ..|..++.++|.-...|..-.-.+-..|. ..
T Consensus 90 ~~LA~~L~~~aP~-----~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~ 164 (449)
T COG0161 90 IELAEKLAELAPE-----GGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALR 164 (449)
T ss_pred HHHHHHHHHhCCC-----CCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhh
Confidence 5555555555431 024689999999999999998763 33544445688877887765444333322 11
Q ss_pred -----------eeecCC-----------ccc-------ccc-----CCCeeEEEEcCC-CCC-Ccccch-----HHHHHH
Q 018172 112 -----------YKWDGD-----------ANT-------FDK-----NNGAYIEVVNSP-NNP-DGTIRE-----AVLAKV 150 (360)
Q Consensus 112 -----------~~~~~~-----------~~~-------~~~-----~~~~~~i~~~~p-~NP-tG~~~~-----~~~~~~ 150 (360)
..++.. .+. ++. .+.+-+-++.-| ..= .|..++ +.++++
T Consensus 165 ~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~i 244 (449)
T COG0161 165 HAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREI 244 (449)
T ss_pred hhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHH
Confidence 111111 010 000 223444444444 333 777765 578899
Q ss_pred hhhcCcEEEEeecccCC-CCCcCCC--CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHH-----HhhccccCC
Q 018172 151 NRSAEGKLIHDLAYYWP-QYTPITG--AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRF-----IELGSIGVS 222 (360)
Q Consensus 151 ~~~~~~~li~D~ay~~~-~~~~~~~--~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~-----~~~~~~~~~ 222 (360)
|++||+++|.||+-.+. ....+.. ..+..-=+-+++|.++-.=+.+|.+++ .+++.+.+..- ....+++.|
T Consensus 245 C~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~-~~~I~~~~~~~~~~~f~HG~TYsgh 323 (449)
T COG0161 245 CDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLT-SDRIYEAFSDGDAGAFMHGHTYSGN 323 (449)
T ss_pred HHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeeeecccccccchhhHhHhh-hHHHHHHHhcccCCeeccCCccccC
Confidence 99999999999998743 3333322 222222255677877633445666666 68888887653 344678899
Q ss_pred hHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHH
Q 018172 223 KESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDC 302 (360)
Q Consensus 223 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (360)
+++..++.+.|+.+.+. ..+++.++.-....+.|.+.+..++.+.=....|.+..+. .+.....-.-+...-...+
T Consensus 324 PlacAaAla~L~i~e~e--~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iE--lv~d~~t~~~f~~~~~~~~ 399 (449)
T COG0161 324 PLACAAALANLDILEEE--DLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIE--LVADKATKTPFEARVGARV 399 (449)
T ss_pred HHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEE--EecccccccchhhhHHHHH
Confidence 99999999999877654 6666666554444444444444332222111112111100 0000000000000002678
Q ss_pred HHHHHhhCeeeeCCCCCCCCCCeEEEE--ecCChHHHHHHHHHHHHHHhchh
Q 018172 303 EKLLRAERIMARGGRRFGADAKYARVS--MLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 303 ~~~l~~~gI~~~pg~~f~~~~~~~R~s--~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
.+.+.++|+++||. | +.+=++ +..++|+++++++++.+.+++..
T Consensus 400 ~~~~~e~Gl~iRp~---g---~~i~~~PPliit~~eid~l~~~l~~al~~~~ 445 (449)
T COG0161 400 RAAALERGLLIRPL---G---DVIYLMPPLIITREEIDELVDALREALDETL 445 (449)
T ss_pred HHHHHHCCeEEeec---C---CEEEEcCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 88999999999994 3 133343 23499999999999999998754
No 358
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.25 E-value=1.8e-09 Score=94.61 Aligned_cols=282 Identities=12% Similarity=0.037 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCC--CCCCCceEEEeCCC-CCCcH----HHHHHhCC--
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSP--GGPEPISVVSAAPY-YSQYP----AETDYLRS-- 109 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~--gd~~~~~vl~~~p~-~~~~~----~~~~~~g~-- 109 (360)
..|-..++-++|. .+++++++.+++--++.++.+.+++ |+. ||+++-. |+.-. ..++.++.
T Consensus 79 ~~lgdklApLiGA------~~~Evvv~dtts~nl~k~L~aalr~~~~r~----vIv~E~~~fpTdly~a~g~~~~~~~~~ 148 (407)
T COG3844 79 ERLGDKLAPLIGA------RAGEVVVTDTTSINLFKVLAAALRPQEGRR----VIVSEGDNFPTDLYIAEGLADLLGIGY 148 (407)
T ss_pred hHHHHHhhhhhcC------CCCceEEeCCcchHHHHHHHHHhccCCCce----EEeecCCCCCcchhhhcchhhhhcccc
Confidence 4566777778886 6779999999999999988887654 444 7777643 33222 33444432
Q ss_pred eeeeecCCcccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccc
Q 018172 110 GLYKWDGDANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLS 186 (360)
Q Consensus 110 ~~~~~~~~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~s 186 (360)
++.-. ..+..+.. ++++.+|++++.|.-||..++ ..+-.++.++|++++.|-+|+.+..+-.....+.++-+++..
T Consensus 149 ~~~~~-~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsy 227 (407)
T COG3844 149 DLEGV-IAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSY 227 (407)
T ss_pred cceee-eChHHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeec
Confidence 22222 22322222 456788899999989999998 666677777999999999999877776667888899999999
Q ss_pred cccC-CCCceEEEEeecCHHHHHHHHHHH-----------------------hhccccCChHHHHHHHHHhcccCCCchh
Q 018172 187 KCTG-HAGSRIGWALVKDTEVARKMTRFI-----------------------ELGSIGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 187 K~~~-~~G~r~G~~~~~~~~~~~~l~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
|.+. -||-..|..+. ++..+...... .+...+.+..+..+...+|+...+ -
T Consensus 228 KYLNgGPGapa~l~v~--~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~---~ 302 (407)
T COG3844 228 KYLNGGPGAPAGLFVA--PRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFAD---V 302 (407)
T ss_pred eeccCCCCCceeEEec--cccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhh---c
Confidence 9874 26755454433 22222211110 111112333444444445554433 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc-C--CcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCC
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQS-G--VFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRF 319 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f 319 (360)
-+.+.|++--...+++.+.+... + ++.+..|... ...+..+.+..+....+.+.|-++||.. .|
T Consensus 303 ~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~---------~~rGsqvS~~hp~~~~V~qaLi~rGVig----D~ 369 (407)
T COG3844 303 DITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAH---------EERGSQVSLYHPHGYQVMQALIDRGVIG----DF 369 (407)
T ss_pred CHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchh---------hhccceeeEecCcHHHHHHHHHHcCccc----cc
Confidence 48888888888888888888765 2 4555555432 2555677788887789999999999973 13
Q ss_pred CCCCCeEEEEecC---ChHHHHHHHHHHHHHHhc
Q 018172 320 GADAKYARVSMLS---REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 320 ~~~~~~~R~s~~~---~~e~~~~~~~~l~~~~~~ 350 (360)
. .++.+||.++. +-+|+=.+++.|.++++.
T Consensus 370 R-~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t 402 (407)
T COG3844 370 R-EPDVLRFGFTPLYVSFVDVWDAVDALEEVLDT 402 (407)
T ss_pred c-CCCeeeecCccceechhHHHHHHHHHHHHHHh
Confidence 2 37899999977 789999999999999875
No 359
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.19 E-value=4.9e-09 Score=100.16 Aligned_cols=196 Identities=15% Similarity=0.135 Sum_probs=117.3
Q ss_pred CeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCc-C-C-CCCC----ccEEEeccccccCCCC
Q 018172 126 GAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTP-I-T-GAAD----HDIMLFTLSKCTGHAG 193 (360)
Q Consensus 126 ~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~-~-~-~~~~----~~i~~~S~sK~~~~~G 193 (360)
+..+|++.-.....|.+.+ +.+.++|+++|+++|.||++.+..... . . ...+ -+ +.+++|.++ .|
T Consensus 251 ~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PD--i~t~gK~lg-~g 327 (464)
T TIGR00699 251 PVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPD--MVTFSKKFQ-TA 327 (464)
T ss_pred cEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCC--EEEehhhhc-cC
Confidence 4566666655556687764 467789999999999999987432211 1 0 1111 33 366789986 33
Q ss_pred ceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC-cccCC
Q 018172 194 SRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGV-FGLPE 272 (360)
Q Consensus 194 ~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~ 272 (360)
|+++. .+ ............+++.|+.+..++.+.|+.+.+. ...++.++.=...++.+.+...+++. +.-..
T Consensus 328 ---G~~~~-~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~--~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vR 400 (464)
T TIGR00699 328 ---GYFFH-DP-AFRPNKPYRQFNTWMGDPSRALILREIIQEIKRK--DLLENVAHVGDYLYTGLEDLQKKYPEFIQNLR 400 (464)
T ss_pred ---Ccccc-ch-hccCCCCcccccCCCCCHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHHhCCCceeeec
Confidence 44444 32 2211112223457788999999998888866543 44444444333444444333334431 11111
Q ss_pred CCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec--CChHHHHHHHHHHHHH
Q 018172 273 YPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARVSML--SREEIFNIFLERLSAI 347 (360)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~ 347 (360)
. .+.+.++-+.+++. ..+.+.+.++||.+.+. + .+.+||... .++++++.++++|.++
T Consensus 401 g------------~G~Glm~gie~~~~~~~~~i~~~~~~~Gvl~~~~---g--~~~ir~~Ppl~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 401 G------------KGRGTFIAWDTPDEAKRDKLLKKARNNGVNIGGC---G--VKAIRLRPMLVFQKHHADIFLEIISKI 463 (464)
T ss_pred c------------cCeEEEEEEecCCHHHHHHHHHHHHHCCcEEecC---C--CCeEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 0 03334555666553 56777788899999763 2 468999764 3999999999999886
Q ss_pred H
Q 018172 348 Q 348 (360)
Q Consensus 348 ~ 348 (360)
+
T Consensus 464 ~ 464 (464)
T TIGR00699 464 I 464 (464)
T ss_pred C
Confidence 4
No 360
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.14 E-value=1.8e-08 Score=96.29 Aligned_cols=260 Identities=14% Similarity=0.087 Sum_probs=150.7
Q ss_pred CcEEEcCChHHHHHHHHHhhcC--------CCCC--CCceEEEeCCCCCCcHHHHHH-hCCe-ee----e------e--c
Q 018172 60 RHIVIGTGSTQLYQAALYALSS--------PGGP--EPISVVSAAPYYSQYPAETDY-LRSG-LY----K------W--D 115 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~--------~gd~--~~~~vl~~~p~~~~~~~~~~~-~g~~-~~----~------~--~ 115 (360)
+.+.+++++++++..+++.... .|.. ++.+|+.-.-+|......+-. .|.. .. + + +
T Consensus 104 ~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p 183 (431)
T TIGR03251 104 PHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNP 183 (431)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCC
Confidence 5799999999999999887631 1210 012488877777766544332 2211 00 0 0 0
Q ss_pred -----CCcc-----------cc-------cc-CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccC
Q 018172 116 -----GDAN-----------TF-------DK-NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYW 166 (360)
Q Consensus 116 -----~~~~-----------~~-------~~-~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~ 166 (360)
.+.+ .+ .. ..++-++++.-...-.|.+.+ +.+.++|+++|+++|+||++.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG 263 (431)
T TIGR03251 184 KLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTG 263 (431)
T ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhc
Confidence 0000 00 00 245667777655666787754 4677899999999999999984
Q ss_pred CCCCc-C--CC--CCCccEEEeccccccCCCCceEEEEeecCH--HHHHHH-H-HHHhhccccCChHHHHHHHHHhcccC
Q 018172 167 PQYTP-I--TG--AADHDIMLFTLSKCTGHAGSRIGWALVKDT--EVARKM-T-RFIELGSIGVSKESQLRAAKILGIVS 237 (360)
Q Consensus 167 ~~~~~-~--~~--~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~--~~~~~l-~-~~~~~~~~~~~~~~~~~~~~~l~~~~ 237 (360)
..... . .. ....+++ +++|.+. . .|++.. .. ++.+.. . ......+++.|+++..++.+.++.+.
T Consensus 264 ~GrtG~~~a~~~~gv~PDi~--~~gK~~~-~---~g~~~~-~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~ 336 (431)
T TIGR03251 264 VGLTGTAWAYQQLGVQPDIV--AFGKKTQ-V---CGIMAG-RRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIE 336 (431)
T ss_pred cCccchHHHHHhcCCCCCEE--EecccCc-c---ceEEec-chHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 32221 1 01 1123444 4688752 2 255544 32 222211 1 11123567788999999988888765
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeee
Q 018172 238 DDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMAR 314 (360)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~ 314 (360)
+. ...++.++.-+..++.|.+...+++.+.. . +++.+.++.+.+++. ..+.+.|.++||.+.
T Consensus 337 ~~--~l~~~~~~~g~~l~~~L~~l~~~~~~~i~-~------------vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~ 401 (431)
T TIGR03251 337 EE--RLVDNARVQGAHLLARLHELAAEFPHLVS-N------------PRGRGLMCAFDLPSTADRDEVIRQLYREGVLLL 401 (431)
T ss_pred hc--CHHHHHHHHHHHHHHHHHHHHHhCcccee-c------------ccccceeEEEEeCCHHHHHHHHHHHHhCCeEEe
Confidence 43 44556665555555555554444531111 1 112333455555543 567777889999998
Q ss_pred CCCCCCCCCCeEEEEec--CChHHHHHHHHHHHH
Q 018172 315 GGRRFGADAKYARVSML--SREEIFNIFLERLSA 346 (360)
Q Consensus 315 pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~ 346 (360)
|.. .+.+||+.. .++++++++++++.+
T Consensus 402 ~~g-----~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 402 GCG-----ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred cCC-----CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 732 356888654 499999999999876
No 361
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.13 E-value=5.3e-09 Score=99.63 Aligned_cols=228 Identities=18% Similarity=0.109 Sum_probs=150.4
Q ss_pred HHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcC---------CCCC-CCceEEEeCCCCCCcHHHHHHh
Q 018172 39 PELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSS---------PGGP-EPISVVSAAPYYSQYPAETDYL 107 (360)
Q Consensus 39 ~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~---------~gd~-~~~~vl~~~p~~~~~~~~~~~~ 107 (360)
.++++.+..++. ..+.+ ....-.+|+|+|+++.+.+.+..+ .+.. ..++|+++.-.|.+....+..+
T Consensus 100 ~~~E~~~v~~l~~l~~~~--~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~l 177 (460)
T COG0076 100 AELEERVVNMLSDLLGAP--EEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYL 177 (460)
T ss_pred HHHHHHHHHHHHHHhCCC--CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHh
Confidence 667777666643 22332 233578999999999877665521 1100 0125999999999999999999
Q ss_pred CCeeeeecCCcccccc---------CCCeeE--EEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcC---
Q 018172 108 RSGLYKWDGDANTFDK---------NNGAYI--EVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPI--- 172 (360)
Q Consensus 108 g~~~~~~~~~~~~~~~---------~~~~~~--i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~--- 172 (360)
|.+...++++...... ++++-. |+-+..+-+||.+=+ +++.++|+++++++++|.||++...+..
T Consensus 178 G~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~ 257 (460)
T COG0076 178 GLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPD 257 (460)
T ss_pred CCCceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCcc
Confidence 9999888877532222 234444 888888889999877 8889999999999999999986322111
Q ss_pred ----CCCCCccEEEeccccccCCCCceEEEEeecCH-HHHHHHHHHHhhccc--------cCChHH--HHHHHHHhcccC
Q 018172 173 ----TGAADHDIMLFTLSKCTGHAGSRIGWALVKDT-EVARKMTRFIELGSI--------GVSKES--QLRAAKILGIVS 237 (360)
Q Consensus 173 ----~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~-~~~~~l~~~~~~~~~--------~~~~~~--~~~~~~~l~~~~ 237 (360)
......+=+..|++| |+.+...+||++.+++ ++.+.+.....+... ..+.++ ..++.+.+..+
T Consensus 258 ~~~~f~l~~vdSIt~d~HK-~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~l- 335 (460)
T COG0076 258 GRWDFGLEGVDSITVDGHK-YGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRL- 335 (460)
T ss_pred chhhcCCCCceEEEECccc-ccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHh-
Confidence 122334456779999 5557778999999888 455554422222211 111122 22222234332
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCC
Q 018172 238 DDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPE 272 (360)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 272 (360)
+ .+.+.++.++..+..+++.+.|++.+.+.+..
T Consensus 336 G--~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~ 368 (460)
T COG0076 336 G--REGYRKLLDRTLELARYLAEELEKLGDFELVN 368 (460)
T ss_pred C--HhHHHHHHHHHHHHHHHHHHHHHhCCCcEeec
Confidence 2 26777788888899999999999997666654
No 362
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.08 E-value=1.5e-08 Score=91.53 Aligned_cols=205 Identities=16% Similarity=0.090 Sum_probs=138.3
Q ss_pred CCCcEEEcCChHHHHHHHHHhhcCCC---CCC-CceEEEeCCCCCCc-HHHHHHhCCeeeeecCCc----------c---
Q 018172 58 DGRHIVIGTGSTQLYQAALYALSSPG---GPE-PISVVSAAPYYSQY-PAETDYLRSGLYKWDGDA----------N--- 119 (360)
Q Consensus 58 ~~~~i~~t~G~t~~l~~~~~~l~~~g---d~~-~~~vl~~~p~~~~~-~~~~~~~g~~~~~~~~~~----------~--- 119 (360)
..+.|.+.+++|+|+..++....+.. ..+ ..+++.-+.+|..- ..++...+......+.++ +
T Consensus 115 ~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t 194 (433)
T KOG1401|consen 115 SAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDST 194 (433)
T ss_pred CccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHH
Confidence 45689999999999999988764321 100 11366655665544 455554433333332211 1
Q ss_pred cccc-----CCCeeEEEEcCCCCCCcccch-H----HHHHHhhhcCcEEEEeecccCC-CCCcCC--CCCCccEEEeccc
Q 018172 120 TFDK-----NNGAYIEVVNSPNNPDGTIRE-A----VLAKVNRSAEGKLIHDLAYYWP-QYTPIT--GAADHDIMLFTLS 186 (360)
Q Consensus 120 ~~~~-----~~~~~~i~~~~p~NPtG~~~~-~----~~~~~~~~~~~~li~D~ay~~~-~~~~~~--~~~~~~i~~~S~s 186 (360)
.+.. ..+..+|++.--.---|.... + .++.+|+++++++|.||++.+. ...... ......-=+.++.
T Consensus 195 ~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~a 274 (433)
T KOG1401|consen 195 ALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVA 274 (433)
T ss_pred HHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcceeeh
Confidence 1111 123566777655666676654 2 4567899999999999999852 222211 1122222366778
Q ss_pred cccCCCCceEEEEeecCHHHHHHHHHHHh---hccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 018172 187 KCTGHAGSRIGWALVKDTEVARKMTRFIE---LGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIR 263 (360)
Q Consensus 187 K~~~~~G~r~G~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 263 (360)
|.++ .|+.+|..++ .+++.+.+..-.. ..+++.|+++..++...++.+.+. +++.++.+.-++.|+.+.+.+.
T Consensus 275 K~L~-gGlPigA~~v-~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~--e~~k~vs~~~k~L~~~l~e~~~ 350 (433)
T KOG1401|consen 275 KPLG-GGLPIGATGV-RDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDP--ETLKNVSKIGKELRKLLDEYLK 350 (433)
T ss_pred hhcc-CCceeEEEee-hHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCH--HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999 9999999998 8999999864433 678899999999999999988776 8888888888888888888887
Q ss_pred hcC
Q 018172 264 QSG 266 (360)
Q Consensus 264 ~~~ 266 (360)
+.+
T Consensus 351 ~~~ 353 (433)
T KOG1401|consen 351 KTP 353 (433)
T ss_pred cCC
Confidence 774
No 363
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.06 E-value=4.9e-10 Score=100.69 Aligned_cols=215 Identities=20% Similarity=0.153 Sum_probs=136.5
Q ss_pred ccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH---HH
Q 018172 27 LSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP---AE 103 (360)
Q Consensus 27 y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~---~~ 103 (360)
|....-. .+|++.+++.+|. + ..+++.++|.+..+++..++++++. |++..++|.... ..
T Consensus 25 Yg~D~~~-----~~l~~~i~~l~g~-------e-~a~f~~sGT~An~~al~~~~~~~~~----vi~~~~aHi~~~E~ga~ 87 (290)
T PF01212_consen 25 YGEDPTT-----ARLEERIAELFGK-------E-AALFVPSGTMANQLALRAHLRPGES----VICADTAHIHFDETGAI 87 (290)
T ss_dssp TTSSHHH-----HHHHHHHHHHHTS-------S-EEEEESSHHHHHHHHHHHHHHTTEE----EEEETTEHHHHSSTTHH
T ss_pred cCCChhH-----HHHHHHHHHHcCC-------C-EEEEeCCCChHHHHHHHHHHhcCCc----eeccccceeeeeccchh
Confidence 6644443 9999999999994 4 4678888999999999999988887 999998766332 22
Q ss_pred HHHhCCeeeeecCCc-ccccc-----------C--CCeeEEEEcCCCCCC-cccch----HHHHHHhhhcCcEEEEeecc
Q 018172 104 TDYLRSGLYKWDGDA-NTFDK-----------N--NGAYIEVVNSPNNPD-GTIRE----AVLAKVNRSAEGKLIHDLAY 164 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~-~~~~~-----------~--~~~~~i~~~~p~NPt-G~~~~----~~~~~~~~~~~~~li~D~ay 164 (360)
....|.+++.++.+. ..+.. . +++++|++++|+|.. |.+++ +.+.++|+++|+.++.|-+-
T Consensus 88 ~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGAR 167 (290)
T PF01212_consen 88 EELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGAR 167 (290)
T ss_dssp HHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETT
T ss_pred hHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhh
Confidence 355799999998665 33432 1 578999999999864 77787 34567899999999999984
Q ss_pred cCC-------CCCcCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHH-----HHH
Q 018172 165 YWP-------QYTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRA-----AKI 232 (360)
Q Consensus 165 ~~~-------~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~ 232 (360)
.+. ....+ ....+.+..|++|.+++++ |.+++.++++++.....+...+.+.......++ ...
T Consensus 168 l~~a~~~~~~~~~e~--~~~~D~v~~~~tK~~g~~~---Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~~~a~~~~~~~~ 242 (290)
T PF01212_consen 168 LANAAAALGVSLAEI--AAGADSVSFGGTKNGGAPG---GAVLAGNKEFIAKARRQRKRLGGGMRQAGVLAAAELYQFAA 242 (290)
T ss_dssp HHHHHCHHHHHHHHH--HTTSSEEEEETTSTT-SSS---EEEEEESHHHHHHHHHHHHHHTHHHHHTTHHHHHHHHHHHH
T ss_pred HHHhhhcccccHHHH--hhhCCEEEEEEEccccccc---ceEEEechHHHHHHHHHHHHhccCeeecceeeeechhhHHH
Confidence 310 11111 2557889999999988777 555444888766654443322222111111111 122
Q ss_pred hcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 233 LGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+..+. .+. ....+-.++.+.+.+.|..+++.
T Consensus 243 l~~l~----~~~-~~~~~~~~~A~~La~~l~~~~~~ 273 (290)
T PF01212_consen 243 LRALE----LWL-ERARHANAMAKRLAAGLEALGGV 273 (290)
T ss_dssp HCHEE----CSH-HHHHCHHHHHHCHHHCHHEECEE
T ss_pred HHHHH----hhH-HHHHHHHHHHHHHHHHHHHCCCc
Confidence 22211 223 33344455567788888888654
No 364
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=1.6e-09 Score=96.92 Aligned_cols=278 Identities=15% Similarity=0.117 Sum_probs=175.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC-C
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG-D 117 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~-~ 117 (360)
-.|++.+|+|+|. ++.|+...| -+++.-++.++.+.||- +.+.+-....+...+++..-.++.+.. |
T Consensus 142 ldlE~~iakF~G~-------E~aivYs~g-F~ti~S~ipafsKrGDI----i~~de~~nfaIq~GlqlSRS~i~~Fkhnd 209 (467)
T KOG1358|consen 142 LDLEKRIAKFMGT-------EDAIVYSYG-FSTIESAIPAFSKRGDI----IFVDEAVNFAIQKGLQLSRSTISYFKHND 209 (467)
T ss_pred cccHHHHHHhhCC-------cceeeeccc-cchhhhcchhhhccCcE----EEEehhhhHHHHHHHhhhhheeEEecCCC
Confidence 7889999999994 567888876 56667889999999997 777777777788888887777776653 3
Q ss_pred cccccc-----------CCC----eeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC----cCC----
Q 018172 118 ANTFDK-----------NNG----AYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT----PIT---- 173 (360)
Q Consensus 118 ~~~~~~-----------~~~----~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~----~~~---- 173 (360)
.++++. +++ .+-|++..-.-+||.+.+ +++.+++.|+...++.||.++.+... .+.
T Consensus 210 m~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~ 289 (467)
T KOG1358|consen 210 MEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFG 289 (467)
T ss_pred HHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCC
Confidence 222211 222 344566666668999988 77788888899999999999854221 122
Q ss_pred -CCCCccEEEeccccccCCCCceEEEEeecCHHHHHH--HHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHH
Q 018172 174 -GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARK--MTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRL 250 (360)
Q Consensus 174 -~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (360)
...+-+++++|+.-+++..| ||.++ +.-+++. |.....-.+.+.++....++..++..+ ++-..+.+.
T Consensus 290 v~~~~iDiv~~sm~~alas~G---gFc~G-~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~-----~~~p~~~~~ 360 (467)
T KOG1358|consen 290 VPITDIDIVTASMETALASGG---GFCAG-KSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILIE-----EWNPEIVQP 360 (467)
T ss_pred CCccceeeeeecccccccccC---ceeec-ceeeEeeeeccccceeeeccCchhhhhhHHHHHHHH-----hhCcchhhh
Confidence 23456789999999998666 77776 4433322 221111122234444444444445433 233345666
Q ss_pred HHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-----ch-----HHHHHHHHhhCeeeeCCCCC-
Q 018172 251 MSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-----ED-----EDCEKLLRAERIMARGGRRF- 319 (360)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~l~~~gI~~~pg~~f- 319 (360)
++.....+...|+...++.+.....+. ..++.+.-+ +. +.+.+++.+ ++.+.-...-
T Consensus 361 L~~k~~~~H~~l~~~s~~~v~~~~~SP-----------i~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~ 428 (467)
T KOG1358|consen 361 LRAKVAKFHAALSSNSGFIVSGSPESP-----------IIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLE 428 (467)
T ss_pred hhccccccchhhhcCCceEEecCcCCc-----------eeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhh
Confidence 677777777777776545543332211 011222211 11 334555555 7776543322
Q ss_pred ----CCCCCeEEEEecC--ChHHHHHHHHHHHHHHh
Q 018172 320 ----GADAKYARVSMLS--REEIFNIFLERLSAIQG 349 (360)
Q Consensus 320 ----~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~ 349 (360)
..-+..+|++++. ++|+++++.+.|++...
T Consensus 429 ~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~ 464 (467)
T KOG1358|consen 429 KLERCPIPPSIRICVSAGMSEEELERAAELIKEVAS 464 (467)
T ss_pred hcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 1124579999977 99999999999998764
No 365
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.06 E-value=1.7e-08 Score=96.47 Aligned_cols=262 Identities=9% Similarity=0.008 Sum_probs=143.8
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEe-CCCCCCcHHHHH-----HhCCe------eeeec-CCcccccc--
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSA-APYYSQYPAETD-----YLRSG------LYKWD-GDANTFDK-- 123 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~-~p~~~~~~~~~~-----~~g~~------~~~~~-~~~~~~~~-- 123 (360)
+.+.+++++++++..+++.... .|.. +|+.- .-.|........ ..|.. +..++ .|.+.++.
T Consensus 105 ~~v~f~~sGseA~e~AlklAr~~tgr~---~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l 181 (431)
T PRK06209 105 DMVKFCKNGSDATSAAVRLARAYTGRD---LVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRYNDIASLEALF 181 (431)
T ss_pred ceEEEecCHHHHHHHHHHHHHHHhCCC---eEEEeccCccccccccccccCCCCCCCChhHhccccccCCCCHHHHHHHH
Confidence 4799999999999999886532 2332 24443 222221110000 00110 11111 12222221
Q ss_pred --C-CCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCCCc--CCCCCCccEEEeccccccCCCCc
Q 018172 124 --N-NGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQYTP--ITGAADHDIMLFTLSKCTGHAGS 194 (360)
Q Consensus 124 --~-~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~~~--~~~~~~~~i~~~S~sK~~~~~G~ 194 (360)
. .+..+|++ -|. .|...+ +.+.++|+++|+++|+||++.+..... .....+-.--+.+++|.+| .|+
T Consensus 182 ~~~~~~~aavi~-Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv~PDi~t~gK~lg-gG~ 257 (431)
T PRK06209 182 EDHPGRIACVIL-EPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIVPDLSCFGKALG-NGF 257 (431)
T ss_pred HhCCCCEEEEEE-ccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCCCcceeeehhhhc-CCc
Confidence 1 23445554 332 233333 467789999999999999986422211 1111111112477899999 788
Q ss_pred eEEEEeecCHHHHHH--HHH---H---HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 018172 195 RIGWALVKDTEVARK--MTR---F---IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSG 266 (360)
Q Consensus 195 r~G~~~~~~~~~~~~--l~~---~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 266 (360)
.+|++++ +.++++. +.. . ....+++.|+....++.+.++.+.+. ...++.++.-...++.+.+...+++
T Consensus 258 p~~av~~-~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~--~~~~~~~~~g~~l~~~L~~~~~~~~ 334 (431)
T PRK06209 258 AVSALAG-KREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDE--DVIERLHEQGAKLAAGVNEAAAEHG 334 (431)
T ss_pred ccEEEEE-HHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhcc--CHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8999998 7888876 311 1 12345667778888888888877553 4455555555555555544444453
Q ss_pred CcccCCCCCcccccccccCCCCCCcccc--c---CCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHH
Q 018172 267 VFGLPEYPLEYCNFTGKFTNSHPGFAWL--E---SKED---EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFN 338 (360)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~ 338 (360)
........|.+.. ...+ + .+.. ..+.+.+.++||.+.| ++++...++++++
T Consensus 335 ~~~~vr~~G~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p~----------l~is~~ht~~dId 393 (431)
T PRK06209 335 LQDHVRVSGRPCC-----------LTYSTLDGNGQPSQAFRTLFLQETIRRGVLMPS----------LVVSYAHGDADIE 393 (431)
T ss_pred CCeEEEeecceEE-----------EEEecCCcccCCcHHHHHHHHHHHHHCCccccc----------ccccccCCHHHHH
Confidence 2211111122110 1111 1 1111 3556677788997622 4666555999999
Q ss_pred HHHHHHHHHHhchh
Q 018172 339 IFLERLSAIQGGSI 352 (360)
Q Consensus 339 ~~~~~l~~~~~~~~ 352 (360)
++++++.+++.+.+
T Consensus 394 ~~l~~l~~~l~~~~ 407 (431)
T PRK06209 394 RTIDAVHGALGVYR 407 (431)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998754
No 366
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.05 E-value=4.2e-08 Score=99.38 Aligned_cols=198 Identities=15% Similarity=0.025 Sum_probs=126.5
Q ss_pred eeEEEEcC-CCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCcCC--CCCCccEEEeccccccCCCC-ceE
Q 018172 127 AYIEVVNS-PNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTPIT--GAADHDIMLFTLSKCTGHAG-SRI 196 (360)
Q Consensus 127 ~~~i~~~~-p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~~~--~~~~~~i~~~S~sK~~~~~G-~r~ 196 (360)
.-++++.- .+.--|.+++ +.+.++|+++|+++|.||++.+. ...... ...+..-=+-+++|.++ .| +.+
T Consensus 585 iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~gKgLt-gG~~Pl 663 (817)
T PLN02974 585 IAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYAKLLT-GGLVPL 663 (817)
T ss_pred EEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeeccccc-CCCCcc
Confidence 33444443 2455677765 46788999999999999999853 222221 12222223556789998 88 699
Q ss_pred EEEeecCHHHHHHHHH------HHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHH----HhcC
Q 018172 197 GWALVKDTEVARKMTR------FIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVI----RQSG 266 (360)
Q Consensus 197 G~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l----~~~~ 266 (360)
|.+++ .+++.+.+.. +....+++.|+++..++.+.|+.+.+. +..++..+.-.+..+++.+.| .+++
T Consensus 664 aa~l~-~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~--~~~~~l~~~~~~l~~~l~~~l~~~l~~~p 740 (817)
T PLN02974 664 AATLA-TEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDP--STNPNLIPPGSRLRELWDEELVRAISSLP 740 (817)
T ss_pred EEEEE-cHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcc--cHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99998 8999988842 223468889999999999999877653 444454444444444444444 4444
Q ss_pred CcccCCCCCcccccccccCCCCCCcccccCCc-----------hHHHHHHHH-hhCeeeeCCCCCCCCCCeEEEEe--cC
Q 018172 267 VFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-----------DEDCEKLLR-AERIMARGGRRFGADAKYARVSM--LS 332 (360)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~-~~gI~~~pg~~f~~~~~~~R~s~--~~ 332 (360)
.+.-+. +.+.++.+.+.+ ...+.+.+. ++||.++|. .+.+|+.. ..
T Consensus 741 ~V~~VR--------------g~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~------Gnvi~l~pP~~i 800 (817)
T PLN02974 741 NVERVV--------------SLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL------GNVVYLMCGPTT 800 (817)
T ss_pred CeeEEE--------------eeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec------CCEEEEeCCCCC
Confidence 322222 222233333211 145566667 899999982 24788743 34
Q ss_pred ChHHHHHHHHHHHHHH
Q 018172 333 REEIFNIFLERLSAIQ 348 (360)
Q Consensus 333 ~~e~~~~~~~~l~~~~ 348 (360)
++|+++++++++.+.+
T Consensus 801 ~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 801 SPETCTRLLRKVYRRL 816 (817)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999998876
No 367
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.95 E-value=1.8e-08 Score=88.39 Aligned_cols=278 Identities=13% Similarity=0.061 Sum_probs=174.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc------C--CCCCCCceEEEeCCCCCCcHHHHHHhCCe
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS------S--PGGPEPISVVSAAPYYSQYPAETDYLRSG 110 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~------~--~gd~~~~~vl~~~p~~~~~~~~~~~~g~~ 110 (360)
.++.+.++++++- +-|+-++-+.|+...++.... + |.+. .+++....+|..-.-.+..++.+
T Consensus 104 ~~f~~~vt~lf~~--------~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nk--a~il~~~~nFhGrT~~ais~s~d 173 (427)
T KOG1402|consen 104 GEFAEYVTKLFGY--------DKVLPMNTGAEAVETACKLARKWGYRKKNIPKNK--AKILSAENNFHGRTLGAISLSTD 173 (427)
T ss_pred HHHHHHHHHhcCc--------ceeeecccchhHHHHHHHHHHHHHHhhccCCccc--eeEEEecccccCceeeeEEecCC
Confidence 5677777777763 468888777999888887664 2 2232 24666666665444333333333
Q ss_pred eee--------------ecC-Ccccccc---CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC
Q 018172 111 LYK--------------WDG-DANTFDK---NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP 167 (360)
Q Consensus 111 ~~~--------------~~~-~~~~~~~---~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~ 167 (360)
... ++- |.+.++. +++..++++.--+...|++.| +...++|.+|++++|.||++.+-
T Consensus 174 ~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl 253 (427)
T KOG1402|consen 174 PDSWDGFGPFLPGVVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGL 253 (427)
T ss_pred cchhhccCCCCCCcceeeccCCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcc
Confidence 321 111 1122222 455555565555778999877 46788999999999999999852
Q ss_pred C--CCcCCCCCCc---cEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchh
Q 018172 168 Q--YTPITGAADH---DIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 168 ~--~~~~~~~~~~---~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
. -.-+.-.+++ ++++ +.|+++-.=..+..+++ +++++-.+.......+++.|+++...+.++|+.+.+
T Consensus 254 ~RTGk~la~d~env~PDivi--lgKalSGG~~Pvsavl~-~~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~e---- 326 (427)
T KOG1402|consen 254 ARTGKLLACDYENVRPDIVI--LGKALSGGVYPVSAVLA-DDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVE---- 326 (427)
T ss_pred cccCcEEEeehhhcCCCeEE--EeccccCCeeeeEEEEe-cHHHHhccCCCccccccCCChHHHHHHHHHHHHHHH----
Confidence 1 1222222222 2332 34777633346777887 899998888777778899999999999999986543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC----c-h--HHHHHHHHhhCeeeeC
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK----E-D--EDCEKLLRAERIMARG 315 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~--~~~~~~l~~~gI~~~p 315 (360)
++..++.+..=+.+.++|++++... +.. -..+++.+.+.-+.+. + . -++.-.|++.|++.-|
T Consensus 327 --ekL~era~~lG~~l~~~L~~l~~~~-p~~--------v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkp 395 (427)
T KOG1402|consen 327 --EKLVERAAKLGEILRDQLNKLQKKF-PHV--------VKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENGLLAKP 395 (427)
T ss_pred --HHHHHHHHHHHHHHHHHHHhccccc-cch--------hheeeccceEEEEEeccccccchhHHHHHHcccccccccCC
Confidence 3455555566667777777774211 000 0123445544333332 1 1 4455677788998877
Q ss_pred CCCCCCCCCeEEEEe--cCChHHHHHHHHHHHHHHh
Q 018172 316 GRRFGADAKYARVSM--LSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 316 g~~f~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~ 349 (360)
-+ .+.+||.. ..+++++++.+++|.+.+.
T Consensus 396 tH-----~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 396 TH-----GNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred CC-----CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 33 45899974 4499999999999998764
No 368
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.85 E-value=6.1e-07 Score=91.39 Aligned_cols=271 Identities=13% Similarity=0.075 Sum_probs=169.1
Q ss_pred HHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc-CCCCCCCceEEEeCCCCCCcHHHHH----HhCCeeeee
Q 018172 40 ELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS-SPGGPEPISVVSAAPYYSQYPAETD----YLRSGLYKW 114 (360)
Q Consensus 40 ~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~-~~gd~~~~~vl~~~p~~~~~~~~~~----~~g~~~~~~ 114 (360)
++...++++.|. +..|.-+..++|++...++.+.. +.+. ..+|++++-.|+.+..+++ ..|++++.+
T Consensus 113 e~Qt~i~eLtGm------~~aNaSl~d~atA~aEa~~~a~~~~~~~--~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~ 184 (939)
T TIGR00461 113 NFQTVVSDLTGL------PVANASLLDEGTAAAEAMALSFNVSKKK--ANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV 184 (939)
T ss_pred HHHHHHHHHHCC------ChhhhhccchhhHHHHHHHHHHHhhcCC--CCEEEECCCCCcchHHHHHHHHHhcCcEEEEE
Confidence 455567777775 44466777788888887776642 2221 1249999999998886655 579998888
Q ss_pred cCCccccccCCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccccccCCC-
Q 018172 115 DGDANTFDKNNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCTGHA- 192 (360)
Q Consensus 115 ~~~~~~~~~~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~~~~- 192 (360)
+.+ .+...-++.++++.+|| -+|.+.+ +.+.++++++|.+++++.-........-++..+.+|++++..+ ||+|
T Consensus 185 ~~~--~l~~~~~~~~v~~q~Pn-~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~-fg~p~ 260 (939)
T TIGR00461 185 DCS--DIKKAVDVFGCLLQYPA-TDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQR-FGVPM 260 (939)
T ss_pred cHH--HHhhcCCEEEEEEECCC-CCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCc-cCCCC
Confidence 643 34332257788888997 5999977 5665666668999998543222233344567788888665444 5541
Q ss_pred ---CceEEEEeecCHHHHHHHHH-HHh----hc--------------------cccCChHHHHHH----HHHhcccCCCc
Q 018172 193 ---GSRIGWALVKDTEVARKMTR-FIE----LG--------------------SIGVSKESQLRA----AKILGIVSDDY 240 (360)
Q Consensus 193 ---G~r~G~~~~~~~~~~~~l~~-~~~----~~--------------------~~~~~~~~~~~~----~~~l~~~~~~~ 240 (360)
|=-.|++.+ .+++.+.+-- ... .. ..+.-...|... ...+..+ +
T Consensus 261 g~GGP~aG~~a~-~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~-G-- 336 (939)
T TIGR00461 261 GYGGPHAAFFAV-KDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYH-G-- 336 (939)
T ss_pred CCCCCceeeeee-cHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHH-C--
Confidence 223778877 6666666411 000 00 000001122211 1112221 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC--chHHHHHHHHhhCeeeeCCCC
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--EDEDCEKLLRAERIMARGGRR 318 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gI~~~pg~~ 318 (360)
...+.++.++...+..++.+.|.+. ++.+..+ .+ |. -+.++++ +.+.+.+.+.++||.++..
T Consensus 337 ~~GL~~iA~~~~~~a~~l~~~L~~~-G~~~~~~--~f--F~---------~~~v~~~~~~~~~i~~~~~~~gi~l~~~-- 400 (939)
T TIGR00461 337 PKGLKNIARRIHSLTSILANGLEND-PHELINK--TW--FD---------TLTVKVGNGISSELLKAAEEFNINLRAV-- 400 (939)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC--Cc--cc---------eEEEEeCCCCHHHHHHHHHHCCCeeeec--
Confidence 2668888888888999999999885 5555433 11 10 1334544 3377888889999997652
Q ss_pred CCCCCCeEEEEecC--ChHHHHHHHHHHH
Q 018172 319 FGADAKYARVSMLS--REEIFNIFLERLS 345 (360)
Q Consensus 319 f~~~~~~~R~s~~~--~~e~~~~~~~~l~ 345 (360)
.++.+++|+.- ++++++.+++.+.
T Consensus 401 ---~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 401 ---DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred ---CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 24689999855 8999999999995
No 369
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=98.80 E-value=1.5e-08 Score=81.97 Aligned_cols=65 Identities=20% Similarity=0.447 Sum_probs=57.4
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cC--CCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCC
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VD--NAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQ 99 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~--~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~ 99 (360)
..|++..|. ++||+++++|++. +| ..++++ +|++|+|+++++..++.+|+++||. |+++.|+|+.
T Consensus 86 a~Y~~~~G~-----~~lR~AiA~~l~~~~g~~v~~~pd-~Ivvt~Ga~~al~~l~~~l~dpGD~----VlVp~P~Y~~ 153 (153)
T PLN02994 86 ALFQDYHGL-----ANFRKAIANFMAEARGGRVKFDAD-MIVLSAGATAANEIIMFCIADPGDA----FLVPTPYYAA 153 (153)
T ss_pred hcCCCCCCc-----HHHHHHHHHHHHHHhCCCCccchh-heEEcCCHHHHHHHHHHHHcCCCCE----EEEeCCCCCC
Confidence 559999998 9999999999864 45 456664 8999999999999999999999999 9999999974
No 370
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.78 E-value=3.1e-07 Score=85.82 Aligned_cols=273 Identities=18% Similarity=0.157 Sum_probs=146.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHH----hCCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDY----LRSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~----~g~~~~~~ 114 (360)
-++...++++.|. +..+.-+-.|++..-..+..+....+.+ ..+|++++-.|+.+..+++. .|.+++.+
T Consensus 113 fe~Qs~i~eLTGm------dvaNaSlyd~atA~aEa~~ma~r~~~~~-~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~ 185 (429)
T PF02347_consen 113 FEYQSMICELTGM------DVANASLYDGATAAAEAMLMAVRATKRK-RNKVLVPESLHPQTRAVLRTYAAPLGIEIVEV 185 (429)
T ss_dssp HHHHHHHHHHHTS------SEE-SEBSSCCHHHHHHHHHHHHHHTT----EEEEETTS-CHHHHHHHHHCCHCCEEEEEE
T ss_pred HHHHHHHHHhhCC------CccCCCCCChhHHHHHHHHHHHHhcccC-CcEEEEcCCcChhhHHHHHHhhhhCCeEEEEe
Confidence 3556667777775 2222344457777767665554211110 12499999999998876554 58899999
Q ss_pred cCCccccccCCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC---CCcCCCCCCccEEEeccccccC
Q 018172 115 DGDANTFDKNNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ---YTPITGAADHDIMLFTLSKCTG 190 (360)
Q Consensus 115 ~~~~~~~~~~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~---~~~~~~~~~~~i~~~S~sK~~~ 190 (360)
+.+.++...++++.+|++.+||. .|.+-+ +++.++++++|.+++. .+ ++. ...-++..+.+|++++ +|.||
T Consensus 186 ~~~~~~~~d~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~gal~~~-~a--d~~aL~~l~~Pge~GADI~vg~-~Q~fg 260 (429)
T PF02347_consen 186 PLDEDGTTDDDDTAAVMVQNPNT-FGVFEDIKEIADIAHAAGALVIV-GA--DPNALGGLKSPGEYGADIVVGE-HQTFG 260 (429)
T ss_dssp -BBTTCSB-STTEEEEEEESS-T-TSB--THHHHHHHHHHTT-EEEE-CG--GCCGCCTC--GGGGT-SEEEEC-CTTTT
T ss_pred cccccCCccccCeEEEEeecCCC-CceEeeHHHHHHHHHHcCCEEEE-ec--CHHHHhCcCChhhcCccEEeeC-CCCCc
Confidence 88777666688899999999984 898877 5566667778988876 33 322 1222357788888777 78777
Q ss_pred CC----CceEEEEeecCHHHHHHH----------------------------HHHHhhccccCCh-HHHHHHHHHhcccC
Q 018172 191 HA----GSRIGWALVKDTEVARKM----------------------------TRFIELGSIGVSK-ESQLRAAKILGIVS 237 (360)
Q Consensus 191 ~~----G~r~G~~~~~~~~~~~~l----------------------------~~~~~~~~~~~~~-~~~~~~~~~l~~~~ 237 (360)
.| |=..|++.+ ..++++.+ ++.+.....+.|. +...++...+..+
T Consensus 261 ~p~~~GGP~~G~~a~-~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~- 338 (429)
T PF02347_consen 261 IPMGFGGPGAGFFAV-REDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYL- 338 (429)
T ss_dssp ---CCC-S--EEEEE--GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHH-
T ss_pred ccCCCCCCCeeeEEE-hhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHh-
Confidence 43 223567777 55555444 2222222222222 2222333333322
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCC
Q 018172 238 DDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGR 317 (360)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~ 317 (360)
+ .+-+.++.+....+..++.+.|.++....+..+ .+.. |+....++ ..+.+ +.++++.-- .
T Consensus 339 G--~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~--~f~e-----------~v~~~~~~-~~~~~-l~~~~~~~g--l 399 (429)
T PF02347_consen 339 G--PEGLREIAERIHLNAHYLAERLKKIYGLPFDNP--FFFE-----------FVVVFSKD-KEVEE-LLKRGIEGG--L 399 (429)
T ss_dssp H--HHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSS--SBSS-----------EEEEESS--HHHHH-HHHTT------E
T ss_pred C--HHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCC--Ccee-----------eeeecCCc-HHHHH-HHHHHHhcC--C
Confidence 3 288999999999999999999999733332211 1111 23333333 33333 334444311 1
Q ss_pred CCC-CCCCeEEEEecC--ChHHHHHHHHHH
Q 018172 318 RFG-ADAKYARVSMLS--REEIFNIFLERL 344 (360)
Q Consensus 318 ~f~-~~~~~~R~s~~~--~~e~~~~~~~~l 344 (360)
.+. .+.+.+-+|++- ++|+|+++++++
T Consensus 400 ~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 400 NLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp EEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred CccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 111 134577778755 789999998864
No 371
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.77 E-value=6.2e-06 Score=74.25 Aligned_cols=159 Identities=14% Similarity=0.144 Sum_probs=99.7
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEc--CChHHHHHHHHHhhcCCCCCCCceEEE-eCCCCCCcHHHH----------
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIG--TGSTQLYQAALYALSSPGGPEPISVVS-AAPYYSQYPAET---------- 104 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t--~G~t~~l~~~~~~l~~~gd~~~~~vl~-~~p~~~~~~~~~---------- 104 (360)
-+.|.+..|+.++. ++.++=. .++|++|..++.+++.|||+ ++. .-.=|.-...++
T Consensus 56 Rd~le~iyA~vfga-------E~ALVRpq~vSGTHAi~~~Lfg~LrpGD~----ll~~tG~PYDTL~~VIG~~g~~~GSL 124 (403)
T PF06838_consen 56 RDKLERIYADVFGA-------EDALVRPQFVSGTHAIALALFGVLRPGDE----LLSITGKPYDTLEEVIGIRGNGPGSL 124 (403)
T ss_dssp HHHHHHHHHHHCT--------SEEEEETTS-SHHHHHHHHHHHH--TT-E----EEESSSS--CCHHHHHTSSSSSSSST
T ss_pred HHHHHHHHHHHhCc-------hhhhhcccccchHHHHHHHHHhcCCCCCe----EEEcCCCchhhHHHHhCCCCCCCCCh
Confidence 38888888888884 4455522 45699999999999999998 664 334455555553
Q ss_pred HHhCCeeeeecCCcc-cccc-------CCCeeEEEEcCCCCCCcccch-----HHH----HHHhh-hcCcEEEEeecccC
Q 018172 105 DYLRSGLYKWDGDAN-TFDK-------NNGAYIEVVNSPNNPDGTIRE-----AVL----AKVNR-SAEGKLIHDLAYYW 166 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~-~~~~-------~~~~~~i~~~~p~NPtG~~~~-----~~~----~~~~~-~~~~~li~D~ay~~ 166 (360)
+..|.+...+++..+ .++. ++++|+|++.-- +|+... +++ ..+.+ +.++++++|++|++
T Consensus 125 ~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~~tk~v~IQRS---rGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGE 201 (403)
T PF06838_consen 125 KEFGIKYREVPLTEDGTIDWEAIKKALKPNTKMVLIQRS---RGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGE 201 (403)
T ss_dssp GGGT-EEEE--B-TTSSB-HHHHHHHHHTTEEEEEEE-S----TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTT
T ss_pred HHhCceeEEEeecCCCCcCHHHHHHhhccCceEEEEecC---CCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcce
Confidence 456777888876653 3322 478999988653 444422 222 22222 38999999999997
Q ss_pred CCCCcCCCCCCccEEEeccccccC----CCCceEEEEeecCHHHHHHHHHHH
Q 018172 167 PQYTPITGAADHDIMLFTLSKCTG----HAGSRIGWALVKDTEVARKMTRFI 214 (360)
Q Consensus 167 ~~~~~~~~~~~~~i~~~S~sK~~~----~~G~r~G~~~~~~~~~~~~l~~~~ 214 (360)
..-..-+...+.+++.+|+-|..| .+| ||+++ ..++++......
T Consensus 202 FvE~~EP~~vGADl~aGSLIKNpGGgiAptG---GYIaG-r~~lVe~~a~RL 249 (403)
T PF06838_consen 202 FVETQEPTEVGADLMAGSLIKNPGGGIAPTG---GYIAG-RKDLVERAAYRL 249 (403)
T ss_dssp TTSSS-GGGGT-SEEEEETTSGGGTTT-SS----EEEEE-SHHHHHHHHHHH
T ss_pred eccccCccccchhheeccceeCCCCCccCcC---CEEec-hHHHHHHHHhhh
Confidence 666666678889999999999876 344 89998 899999987654
No 372
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.73 E-value=2.3e-06 Score=79.82 Aligned_cols=284 Identities=13% Similarity=0.086 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCC-------C-CCCcHHHHHHhCC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAP-------Y-YSQYPAETDYLRS 109 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p-------~-~~~~~~~~~~~g~ 109 (360)
.+|++.+++++|. + .++.|..++.+-.+++..+++ +|+. +++..+ . |......+...|+
T Consensus 77 ~~Lee~vael~G~-------E-~alpthqGRgaE~Il~~~~~~~~g~e----~g~~~~~~~v~hn~~fett~g~a~l~G~ 144 (467)
T TIGR02617 77 YALAESVKNIFGY-------Q-YTIPTHQGRGAEQIYIPVLIKKREQE----KGLDRSKMVAFSNYFFDTTQGHSQINGC 144 (467)
T ss_pred HHHHHHHHHHhCC-------c-eEEECCCCchHHHHHHHhhccccccc----ccccccccccceEEEEecchHHHHHcCc
Confidence 8999999999994 4 578887779998899999988 6776 554332 2 2222345667788
Q ss_pred eeeeecCC----------c-ccccc--------C---CCeeEEEEcCCCCC-Ccccch----HHHHHHhhhcCcEEEEee
Q 018172 110 GLYKWDGD----------A-NTFDK--------N---NGAYIEVVNSPNNP-DGTIRE----AVLAKVNRSAEGKLIHDL 162 (360)
Q Consensus 110 ~~~~~~~~----------~-~~~~~--------~---~~~~~i~~~~p~NP-tG~~~~----~~~~~~~~~~~~~li~D~ 162 (360)
.++.+..+ . ..++. . ++.-.+.+.--+|- -|..+| +.+.++|+++|+.++.|.
T Consensus 145 ~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDg 224 (467)
T TIGR02617 145 TARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDS 224 (467)
T ss_pred eeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEh
Confidence 87765321 1 11111 1 12222222222343 366666 467789999999999997
Q ss_pred cccCC----------CCCcC--CC-----CCCccEEEeccccccCCC-CceEEEEeecCH---HHHHHHHHHH----hh-
Q 018172 163 AYYWP----------QYTPI--TG-----AADHDIMLFTLSKCTGHA-GSRIGWALVKDT---EVARKMTRFI----EL- 216 (360)
Q Consensus 163 ay~~~----------~~~~~--~~-----~~~~~i~~~S~sK~~~~~-G~r~G~~~~~~~---~~~~~l~~~~----~~- 216 (360)
+-.+. .+... .. ....+.+..|+||-++.| | |+++++++ ++.+.++... .+
T Consensus 225 ARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG---g~Lag~d~~~~~l~~~~~~~~i~~EGf~ 301 (467)
T TIGR02617 225 ARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG---GLLCFKDDSFFDVYTECRTLCVVQEGFP 301 (467)
T ss_pred HHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc---ceEEecchhHHHHHHHHHhhcccccCCc
Confidence 54321 11111 11 145678899999998876 4 67777677 4444443322 11
Q ss_pred ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccC
Q 018172 217 GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLES 296 (360)
Q Consensus 217 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (360)
+..+.+.-...+++..|....+. .++... .+..++|.+.|.+. ++.+.. .|+.+.|+|... +...+
T Consensus 302 tYGGlagrd~ea~a~Gl~e~~~~--~yl~~r----i~qv~yl~~~L~~~-Gvpi~~-~Gghav~iDa~~------~lphi 367 (467)
T TIGR02617 302 TYGGLEGGAMERLAVGLYDGMNL--DWLAYR----INQVQYLVNGLEEI-GVVCQQ-AGGHAAFVDAGK------LLPHI 367 (467)
T ss_pred CcCchhHHHHHHHHhhhhhcccH--HHHHHH----HHHHHHHHHHHHhC-CCcEEe-cCccEEEEehhh------hCCCC
Confidence 22256666666766666633222 333333 33346778888887 455555 777766653221 12223
Q ss_pred C-----chHHHHHHHHhhCeeee-CCCC-CCC----------CCCeEEEEecC---ChHHHHHHHHHHHHHHhch
Q 018172 297 K-----EDEDCEKLLRAERIMAR-GGRR-FGA----------DAKYARVSMLS---REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 297 ~-----~~~~~~~~l~~~gI~~~-pg~~-f~~----------~~~~~R~s~~~---~~e~~~~~~~~l~~~~~~~ 351 (360)
+ ....+..+-.+.||-.. -|+. ++. .-..+|+.+-. +.+.++...+++..+.++.
T Consensus 368 p~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~~ 442 (467)
T TIGR02617 368 PADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENA 442 (467)
T ss_pred ChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhhh
Confidence 2 33667777778888632 2332 111 12469999855 8899999999999998764
No 373
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.73 E-value=1.8e-07 Score=86.50 Aligned_cols=192 Identities=18% Similarity=0.120 Sum_probs=121.0
Q ss_pred CCcEEEcCChHHHHHHHHHhhc------C-CCCCCCceEEEeCCCCCCcHHHHHHhCC-------------eeeeecCCc
Q 018172 59 GRHIVIGTGSTQLYQAALYALS------S-PGGPEPISVVSAAPYYSQYPAETDYLRS-------------GLYKWDGDA 118 (360)
Q Consensus 59 ~~~i~~t~G~t~~l~~~~~~l~------~-~gd~~~~~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~ 118 (360)
.+.+.+++++++++..+++... . ++.. +|+....+|......+-..+. .+..+|.+.
T Consensus 76 ~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~---~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~ 152 (339)
T PF00202_consen 76 LDRVFFANSGSEAVEAALKLARQYHNKRAYTGRR---KILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPD 152 (339)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTT---EEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTC
T ss_pred cceeeeccCchHHHHHHHHHhhcccccccccCCc---eEEEeeeeeeccCcccccccCCccccccccccccccccccCCc
Confidence 4589999999999999988876 2 2332 588888888876543333211 122333321
Q ss_pred -cc--------------cc-c-CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCcCC--
Q 018172 119 -NT--------------FD-K-NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTPIT-- 173 (360)
Q Consensus 119 -~~--------------~~-~-~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~~~-- 173 (360)
.. +. . .++..++++.--..-.|...+ +.+.++|+++|+++|.||++.+. ......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~ 232 (339)
T PF00202_consen 153 PAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFAS 232 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGH
T ss_pred cchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccce
Confidence 11 00 0 245556666544444676654 57788999999999999999853 222222
Q ss_pred --CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 174 --GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 174 --~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
.....++++. +|.++ .|+.+|.+++ .+++.+.+.......+++.++++..++.+.|+.+... ...++.++.=
T Consensus 233 ~~~gv~PDiv~~--gK~l~-gG~p~sav~~-~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~--~~~~~~~~~g 306 (339)
T PF00202_consen 233 EHYGVDPDIVTF--GKGLG-GGLPISAVLG-SEEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEE--DLLERVRELG 306 (339)
T ss_dssp HHHTSSSSEEEE--EGGGG-TTSSEEEEEE-EHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHT--THHHHHHHHH
T ss_pred ecccccCccccc--ccchh-hhhhcccccc-cchhhccccccccccccccchHhhhhhhhHHHhhccH--HHHHHHHHHH
Confidence 1233355544 59999 7899999998 7898888865555577888999999999988866543 3444444443
Q ss_pred HHHHHHHH
Q 018172 252 SERWNMLR 259 (360)
Q Consensus 252 ~~~~~~l~ 259 (360)
...++.|.
T Consensus 307 ~~l~~~L~ 314 (339)
T PF00202_consen 307 ERLREGLR 314 (339)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33344444
No 374
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.69 E-value=1.2e-06 Score=80.16 Aligned_cols=199 Identities=17% Similarity=0.101 Sum_probs=138.8
Q ss_pred CCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeC-----CCCCCcHHHHHHhCCeeeeecCCcc----ccc--cCCCe
Q 018172 59 GRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAA-----PYYSQYPAETDYLRSGLYKWDGDAN----TFD--KNNGA 127 (360)
Q Consensus 59 ~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~-----p~~~~~~~~~~~~g~~~~~~~~~~~----~~~--~~~~~ 127 (360)
+..++++++.+.++.+++..+.+++. ++++. +...++.++++..|++++.+-.... ++. .++++
T Consensus 83 aea~~ivnnn~aAVll~~~al~~~~E-----vVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~tn~t~~~d~~~AIne~t 157 (395)
T COG1921 83 AEAAAIVNNNAAAVLLTLNALAEGKE-----VVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTTNRTHLKDYELAINENT 157 (395)
T ss_pred hhheeeECCcHHHHHHHHhhhccCCe-----EEEEccccccCCCCChhHHHHHcCCEEEEecccCcCCHHHHHHHhccCC
Confidence 35799999999999999999987433 44331 6889999999999999998853322 222 25778
Q ss_pred eEEEEcCCCCC--CcccchHHHHHHhhhcCcEEEEeecccCC--CCCcCC--CCCCccEEEeccccccCCCCceEEEEee
Q 018172 128 YIEVVNSPNNP--DGTIREAVLAKVNRSAEGKLIHDLAYYWP--QYTPIT--GAADHDIMLFTLSKCTGHAGSRIGWALV 201 (360)
Q Consensus 128 ~~i~~~~p~NP--tG~~~~~~~~~~~~~~~~~li~D~ay~~~--~~~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~ 201 (360)
++++-.+-+|- +|.+--+.+.++++++++++++|.+-... ..+.+. -..+.+++++|..|.++ |-+.|.+++
T Consensus 158 a~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllg--GPqaGii~G 235 (395)
T COG1921 158 ALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLG--GPQAGIIVG 235 (395)
T ss_pred eeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcC--CCccceEec
Confidence 88755554442 33333367888999999999999986431 111221 25678999999999987 667898888
Q ss_pred cCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCC-chhHHHHHHHHHHHHHHHHHHHHHhc
Q 018172 202 KDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDD-YPNFFEYGRRLMSERWNMLRQVIRQS 265 (360)
Q Consensus 202 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~ 265 (360)
..++++.+++..-....-...+...+..++|+..... -..........+.+..+.+.+.....
T Consensus 236 -kKelI~~lq~~~l~Ralrv~K~tla~l~~aLe~y~~~~~~~~~~~~~~~l~~~~~~l~~~~~~l 299 (395)
T COG1921 236 -KKELIEKLQSHPLKRALRVDKETLAALEAALELYLQPEILGERLRTLRLLTQPAEALLAQAGRL 299 (395)
T ss_pred -hHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHHHHcCchhhhhhhHHHHhhccHHHHHHHHhhhh
Confidence 8999999988877777788889998888888854432 11333344444455555555555444
No 375
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.63 E-value=2.5e-06 Score=79.86 Aligned_cols=231 Identities=18% Similarity=0.125 Sum_probs=143.5
Q ss_pred HHHHHHHHHHH-hhcCCCCC----CCCcEEEcCChHHHHHHHHHhhcC--------CCC--CCCceEEEeCCCCCCcHHH
Q 018172 39 PELAEAINNLH-HVVDNAVS----DGRHIVIGTGSTQLYQAALYALSS--------PGG--PEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 39 ~~lr~~la~~~-~~~~~~~~----~~~~i~~t~G~t~~l~~~~~~l~~--------~gd--~~~~~vl~~~p~~~~~~~~ 103 (360)
.++++.+.+++ ...|.+.. ....-++|+|+|+++...+....+ .|. ..+..+++++-+|.+...+
T Consensus 78 ~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Ka 157 (373)
T PF00282_consen 78 TEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKA 157 (373)
T ss_dssp HHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHH
T ss_pred ccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHh
Confidence 67777777664 34454411 124678899999998777655421 121 1224588899899999999
Q ss_pred HHHhCCeeeeecCCccc-ccc------------CCC-eeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCC-
Q 018172 104 TDYLRSGLYKWDGDANT-FDK------------NNG-AYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWP- 167 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~-~~~------------~~~-~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~- 167 (360)
+..+|..++.++.|.++ ++. +.. +-+|+.+..+-.||.+=+ +++.++|+++++|+.+|.+|++.
T Consensus 158 a~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~ 237 (373)
T PF00282_consen 158 ARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSA 237 (373)
T ss_dssp HHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGG
T ss_pred cceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccccc
Confidence 99999999999988643 322 122 335677777888999966 78888899999999999999862
Q ss_pred ----CCCcCC-CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHH-----HHH----------hh--ccccCCh-H
Q 018172 168 ----QYTPIT-GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMT-----RFI----------EL--GSIGVSK-E 224 (360)
Q Consensus 168 ----~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~-----~~~----------~~--~~~~~~~-~ 224 (360)
.+.... +....+=+..+++|.++ ....+|+++.+++....... ... .. .+...+. .
T Consensus 238 ~~~~~~~~~~~gi~~adSit~d~HK~l~-~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~ 316 (373)
T PF00282_consen 238 LLSPEYRHLLFGIERADSITIDPHKWLG-VPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRRF 316 (373)
T ss_dssp GGHCTTGGGGTTGGGESEEEEETTTTTS--SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHH
T ss_pred cccccccccccccccccccccchhhhhc-CCccceeEEeecccchHHHhccChhhhcccccccccccccccccccccccc
Confidence 222221 23333456678999777 66789999887765444321 000 00 0111222 2
Q ss_pred HHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCC
Q 018172 225 SQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEY 273 (360)
Q Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 273 (360)
....+...++.+ + .+.+.+..++..+..+++.+.|++.+.+++..+
T Consensus 317 ~alk~w~~l~~~-G--~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~ 362 (373)
T PF00282_consen 317 RALKLWATLKSL-G--REGYRERIRRCIELARYLADRLRKDPRFELVNE 362 (373)
T ss_dssp HHHHHHHHHHHH-H--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESST
T ss_pred hHHHHHHHHHhc-C--HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 223333344422 2 267777788888888999999999987777643
No 376
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.60 E-value=1.3e-07 Score=85.70 Aligned_cols=212 Identities=16% Similarity=0.129 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCC------CCCcHHHHHHhCCeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPY------YSQYPAETDYLRSGLY 112 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~------~~~~~~~~~~~g~~~~ 112 (360)
..+++.++...+. + .-+++++...++.+++..+.. |.+ |+++.-. -..+..+++..|++++
T Consensus 50 ~~v~~ll~~ltgA-------e-aA~VvNnnaAAv~L~l~~la~-~~E----vIvsRGelVeiGgsFRip~vm~~sGa~lv 116 (367)
T PF03841_consen 50 AHVEELLCELTGA-------E-AALVVNNNAAAVLLALNTLAK-GKE----VIVSRGELVEIGGSFRIPDVMRQSGARLV 116 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccc-------c-ccccccccccccccccccccc-ccc----ccccccccccccccccccccccccccccc
Confidence 4445556666663 3 577778888888888888874 444 7776422 2236678888899998
Q ss_pred eecCC----cccccc--CCCeeEEEEcCCCCC--Cccc---chHHHHHHhhhcCcEEEEeeccc---------CCCCCcC
Q 018172 113 KWDGD----ANTFDK--NNGAYIEVVNSPNNP--DGTI---REAVLAKVNRSAEGKLIHDLAYY---------WPQYTPI 172 (360)
Q Consensus 113 ~~~~~----~~~~~~--~~~~~~i~~~~p~NP--tG~~---~~~~~~~~~~~~~~~li~D~ay~---------~~~~~~~ 172 (360)
.+-.. ...+.. +++|.+++-.+++|. .|.. --+++.+++++|++++++|..-+ .+.-+.+
T Consensus 117 EVGttN~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v 196 (367)
T PF03841_consen 117 EVGTTNRTHLSDYEKAITENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTV 196 (367)
T ss_dssp --------------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT--------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHH
Confidence 77432 223333 678999988888886 3333 33788888999999999998753 1112233
Q ss_pred C--CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCC--------chh
Q 018172 173 T--GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDD--------YPN 242 (360)
Q Consensus 173 ~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~ 242 (360)
. -..+.+++++|-.|.+|-| ..|.+++ ..++++.+++..-....-.......++.+.|+...+. ...
T Consensus 197 ~~~~~~GaDlV~fSGdKlLGGP--QaGiI~G-kk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ 273 (367)
T PF03841_consen 197 QEYLAAGADLVTFSGDKLLGGP--QAGIIVG-KKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLR 273 (367)
T ss_dssp --CCCCT-SEEEEETTSSSSS---S-EEEEE-EHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH---------------
T ss_pred HHHhhcCCCEEEEECCCcCCCC--CeEEEEe-CHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhcccccccccc
Confidence 2 2567899999999999844 4798888 8999999998877778888999988888877743321 124
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSG 266 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~ 266 (360)
.+....+.++++.+.+...|+...
T Consensus 274 ml~~~~~~L~~rA~~l~~~l~~~~ 297 (367)
T PF03841_consen 274 MLTQSLEELRARAERLAAQLKAAL 297 (367)
T ss_dssp ------------------------
T ss_pred cccccccccccccccccccccccc
Confidence 456666777788888888777653
No 377
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.47 E-value=5.3e-06 Score=76.50 Aligned_cols=271 Identities=16% Similarity=0.128 Sum_probs=155.7
Q ss_pred EEEcCChHHHHHHHHHhh---cCC-CCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCCcccccc---------CCCee
Q 018172 62 IVIGTGSTQLYQAALYAL---SSP-GGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDANTFDK---------NNGAY 128 (360)
Q Consensus 62 i~~t~G~t~~l~~~~~~l---~~~-gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~---------~~~~~ 128 (360)
=..|+|+|+++.+.-..- ... -+.+...++++.-.+.++...++-++.++..++.+...+.. +++|.
T Consensus 141 g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~eNti 220 (491)
T KOG1383|consen 141 GCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDENTI 220 (491)
T ss_pred CccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeeccccceEecHHHHHHHhccceE
Confidence 346788899844433322 111 11111237777788888888888899999999988765544 57999
Q ss_pred EEEEcCCCCCCcccch-HHHHHHhhh-cCcEEEEeecccCCCCC-cCC---CCCCccEE----EeccccccCCCCceEEE
Q 018172 129 IEVVNSPNNPDGTIRE-AVLAKVNRS-AEGKLIHDLAYYWPQYT-PIT---GAADHDIM----LFTLSKCTGHAGSRIGW 198 (360)
Q Consensus 129 ~i~~~~p~NPtG~~~~-~~~~~~~~~-~~~~li~D~ay~~~~~~-~~~---~~~~~~i~----~~S~sK~~~~~G~r~G~ 198 (360)
+++.+.|+-|+|..=+ +.+.++..+ +++.+.+|.+-+.+-.+ ... ...-++.. .-+-+| +|+.--..||
T Consensus 221 ~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HK-YGl~~~G~~~ 299 (491)
T KOG1383|consen 221 MLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVTSISADGHK-YGLAPAGSSW 299 (491)
T ss_pred EEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCceeEeeccce-eeeeecCcEE
Confidence 9999999999999977 556555554 99999999987753322 111 11112222 235567 6655555899
Q ss_pred EeecCHHHHHH-H-------HHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q 018172 199 ALVKDTEVARK-M-------TRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGL 270 (360)
Q Consensus 199 ~~~~~~~~~~~-l-------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 270 (360)
++-++.++... + .......+.+.+.++...+++....+.-+.+.+.+.++ .+.+....+.+.+.+++++.+
T Consensus 300 vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~-~ive~~~~l~egie~i~~i~i 378 (491)
T KOG1383|consen 300 VLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQ-NIVETARKLREGIENIKGIKI 378 (491)
T ss_pred EEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHhhhcccccee
Confidence 88865543322 1 11111112222322222222212111122224444444 466667788888888877666
Q ss_pred CCCCCcccccccccCCCCCCcccccCCch--HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC---ChHHHHHHHHHHH
Q 018172 271 PEYPLEYCNFTGKFTNSHPGFAWLESKED--EDCEKLLRAERIMARGGRRFGADAKYARVSMLS---REEIFNIFLERLS 345 (360)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~---~~e~~~~~~~~l~ 345 (360)
...+.. .|+..+-..- -.+.+.|++.|=.+ |+..|. ..+-+++.. .++-.++++.-|+
T Consensus 379 ~gkp~v-------------s~~~~~s~~~~i~elsd~l~~~GW~l-nalq~P---~a~Hi~vt~~~~~~~~A~~~v~Di~ 441 (491)
T KOG1383|consen 379 VGKPLV-------------SFILFGSNDVNIFELSDLLRKKGWIL-NALQFP---AAIHICVTRVHAREDVADRFVADIR 441 (491)
T ss_pred cCCCcE-------------EEEEccCCccchhhhhHHHHhcCcCc-cccCCC---CceEEEEEeeeccHHHHHHHHHHHH
Confidence 543211 1223332222 66788888888554 444343 244555533 4555677888888
Q ss_pred HHHhch
Q 018172 346 AIQGGS 351 (360)
Q Consensus 346 ~~~~~~ 351 (360)
+++.+-
T Consensus 442 ~~~~el 447 (491)
T KOG1383|consen 442 KVVEEL 447 (491)
T ss_pred HHHHHH
Confidence 887653
No 378
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.29 E-value=0.00053 Score=61.64 Aligned_cols=298 Identities=14% Similarity=0.092 Sum_probs=179.2
Q ss_pred ccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCC-ceEEEeCCCCC-CcHHHH
Q 018172 27 LSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEP-ISVVSAAPYYS-QYPAET 104 (360)
Q Consensus 27 y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~-~~vl~~~p~~~-~~~~~~ 104 (360)
|+.+.++ -.|++++.+.+|- ..++.|.-+..+-++++..+.++++.++ .+...+...|. -...-.
T Consensus 75 Yagsrs~-----~~L~~avkdifGf--------q~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~ 141 (471)
T COG3033 75 YAGSRSY-----YALADAVKDIFGF--------QYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHI 141 (471)
T ss_pred hcccccH-----HHHHHHHHHhcCc--------eeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHH
Confidence 6666777 9999999999984 3678887778888888888887776653 22344444444 444556
Q ss_pred HHhCCeeeeecCCcc-----------cccc-----------CCCeeEEEEcCCCC-CCcccch----HHHHHHhhhcCcE
Q 018172 105 DYLRSGLYKWDGDAN-----------TFDK-----------NNGAYIEVVNSPNN-PDGTIRE----AVLAKVNRSAEGK 157 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~-----------~~~~-----------~~~~~~i~~~~p~N-PtG~~~~----~~~~~~~~~~~~~ 157 (360)
+..|+.++.+..+.. .++. .++...|+++--|| --|...| +...++|+++++.
T Consensus 142 ~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ip 221 (471)
T COG3033 142 QINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIP 221 (471)
T ss_pred HhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCc
Confidence 667888877664411 1111 13455565555555 4566666 5778899999999
Q ss_pred EEEeecccC----------CCCCcCC-------CCCCccEEEeccccccCCCCceEEEEeecCHH---HHHHHHHHH---
Q 018172 158 LIHDLAYYW----------PQYTPIT-------GAADHDIMLFTLSKCTGHAGSRIGWALVKDTE---VARKMTRFI--- 214 (360)
Q Consensus 158 li~D~ay~~----------~~~~~~~-------~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~---~~~~l~~~~--- 214 (360)
++.|.+-.. +.+..-. .....+-++.|.-|- ++..+ .|++...|+. +...++...
T Consensus 222 vv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD-~lvnm-GGfl~~~D~~~fDvy~~~~~~~V~~ 299 (471)
T COG3033 222 VVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKD-GLVNM-GGFLCFKDDSFFDVYEECRTLVVVQ 299 (471)
T ss_pred EEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeecccc-ceecc-ccEEEecCccHHHHHHHHHhheEee
Confidence 999986441 1111110 012345567777773 22221 1677776664 444444322
Q ss_pred --hhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcc
Q 018172 215 --ELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFA 292 (360)
Q Consensus 215 --~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (360)
..+..+.+.-...+++..|..-.+. .|+.....+ .++|.+.|.+. ++.+..|.|+...|.+.- =+
T Consensus 300 eG~~tYGgl~GrdmealAvGL~e~~~~--~yl~~Rv~Q----v~YL~~~l~~~-GVpi~~paGGHavfvda~------~~ 366 (471)
T COG3033 300 EGFPTYGGLAGRDMEALAVGLREGVNF--DYLAHRVAQ----VQYLADGLEEA-GVPIVQPAGGHAVFVDAG------KF 366 (471)
T ss_pred ccccccCcccchhHHHHHHHHHHhcCc--HHHHHHHHH----HHHHHHHHHhc-CCeeEecCCCceEEeehh------hh
Confidence 1122234555555666655532222 444443333 46778888888 566778888876665321 12
Q ss_pred cccCCch-----HHHHHHHHhhCeeeeCCCCC--CCC----------CCeEEEEecC---ChHHHHHHHHHHHHHHhchh
Q 018172 293 WLESKED-----EDCEKLLRAERIMARGGRRF--GAD----------AKYARVSMLS---REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 293 ~~~~~~~-----~~~~~~l~~~gI~~~pg~~f--~~~----------~~~~R~s~~~---~~e~~~~~~~~l~~~~~~~~ 352 (360)
+...|.. ....++-++.||-..--..| +.+ ..-+|+.+-. +.+-+|-.+++++++.+...
T Consensus 367 lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~~ 446 (471)
T COG3033 367 LPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENAE 446 (471)
T ss_pred cCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhccc
Confidence 2344432 66778888889986543223 211 2469999844 78999999999999987653
No 379
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.22 E-value=0.0012 Score=60.90 Aligned_cols=262 Identities=16% Similarity=0.120 Sum_probs=152.3
Q ss_pred cEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHH----hCCeeeeecCCc-ccccc--CCCeeEEEEc
Q 018172 61 HIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDY----LRSGLYKWDGDA-NTFDK--NNGAYIEVVN 133 (360)
Q Consensus 61 ~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~-~~~~~--~~~~~~i~~~ 133 (360)
|--+--++|.+-..+..+..-.+.. ..+++++.-+|+.+...++. +|.+++..+.+. +.++. +.++.++++.
T Consensus 139 NASm~DeaTAaAEAm~ma~r~~k~k-~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~~~~~~~gv~vQ 217 (450)
T COG0403 139 NASMLDEATAAAEAMLMAKRVTKKK-RNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESADDGDVFGVLVQ 217 (450)
T ss_pred cchhhhhHHHHHHHHHHHHHhhcCc-CceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhhhhccccCeEEEEEe
Confidence 3344556677767766665432211 12499999999999988776 367777766541 12222 4578899999
Q ss_pred CCCCCCcccch--HHHHHHhhhcCcEEEEee-cccCCCCCcCCCCCCccEEEeccccccCC----CCceEEEEeecCHHH
Q 018172 134 SPNNPDGTIRE--AVLAKVNRSAEGKLIHDL-AYYWPQYTPITGAADHDIMLFTLSKCTGH----AGSRIGWALVKDTEV 206 (360)
Q Consensus 134 ~p~NPtG~~~~--~~~~~~~~~~~~~li~D~-ay~~~~~~~~~~~~~~~i~~~S~sK~~~~----~G~r~G~~~~~~~~~ 206 (360)
+|+ -.|...+ ..+.+.+++++.++++=. --+ -.+..-++..+.+|+++|..- ||+ .|=..||..+ ..++
T Consensus 218 yP~-~~G~~~~d~~~l~~~~h~~~al~~v~aDpla-L~LL~pPGe~GADIvvG~~Qr-fGvPmgfGGPhag~fA~-~~~~ 293 (450)
T COG0403 218 YPN-TFGIVEEDLRALIEAAHSAGALVIVAADPLA-LGLLKPPGEFGADIVVGSAQR-FGVPMGFGGPHAGYFAV-KDEF 293 (450)
T ss_pred cCC-CCCccchhHHHHHHHHhhcCCEEEEEechhH-hhccCCccccCCceEEecCcc-cCCCcCCCCcceeeeeE-hHhH
Confidence 997 5885544 455566666777766422 111 133444578889999998776 443 2344778777 5555
Q ss_pred HHHH----------------------------HHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 207 ARKM----------------------------TRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 207 ~~~l----------------------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
.+.+ ++.+.....|.|.--...++.+.....+. .-+.++..+.-+...++
T Consensus 294 ~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp--~GLk~iA~r~~~~a~~l 371 (450)
T COG0403 294 KRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGP--QGLKEIAERIHRLAAYL 371 (450)
T ss_pred hhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHHH
Confidence 4332 33333233333322222222222222233 88889999999999999
Q ss_pred HHHHHhcC-CcccCCCCCcccccccccCCCCCCcccccCCc-h-HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC--C
Q 018172 259 RQVIRQSG-VFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-D-EDCEKLLRAERIMARGGRRFGADAKYARVSMLS--R 333 (360)
Q Consensus 259 ~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~--~ 333 (360)
.+.|++.+ ++.+... .+ |. -+.++++. . +.+.+.....|+.++. + ++..+=+++.- +
T Consensus 372 a~~L~~~~~g~~~~~~--~f--Fd---------t~~v~~~~~~~~~l~~~~~~~G~~L~~---~--~~~~~~ia~tEt~t 433 (450)
T COG0403 372 AAGLKEIGAGVELVFD--HF--FD---------TFTVRVPEEVAEALLAAAIAGGINLRR---V--DADTVLIALTETTT 433 (450)
T ss_pred HHHHhhcCCceEeccc--cc--ee---------eEEEecchhHHHHHHHHHHhcCCceee---e--cCCceEEEeecccC
Confidence 99999764 2332211 11 10 14455552 2 4455555566776654 2 23345555533 6
Q ss_pred hHHHHHHHHHHHHH
Q 018172 334 EEIFNIFLERLSAI 347 (360)
Q Consensus 334 ~e~~~~~~~~l~~~ 347 (360)
+++++.+++++...
T Consensus 434 ~~~i~~l~~~~~~~ 447 (450)
T COG0403 434 KEDIDALVAAFGGV 447 (450)
T ss_pred HHHHHHHHHHHhhh
Confidence 89998888887654
No 380
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.22 E-value=0.00023 Score=64.25 Aligned_cols=280 Identities=13% Similarity=0.095 Sum_probs=161.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEc-CChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH-HHHHHhCCe--eeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIG-TGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP-AETDYLRSG--LYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t-~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~-~~~~~~g~~--~~~~ 114 (360)
.+.++.++++++. | ...+|++. .|+|....++...|+..... -.+..-.|.... .-++..+-. +...
T Consensus 53 ~~a~~~lreLl~i---P--d~Y~VlflqGGat~qf~~~p~nLl~~~~~----~yv~~g~Ws~~a~~eA~~~~~~~~~~~~ 123 (365)
T COG1932 53 EEAEKDLRELLNI---P--DDYKVLFLQGGATGQFAMAPMNLLGKRGT----DYVDTGAWSEFAIKEAKKVGKQPKLIDA 123 (365)
T ss_pred HHHHHHHHHHhCC---C--CCceEEEEcCccHHHHHHHHHhhhcccCc----eeEeeeehhHhHHHHHHHhccccccccc
Confidence 4555555666665 2 23467766 67788888888888865432 133334444332 223333422 1111
Q ss_pred cCCcccc---------ccCCCeeEEEEcCCCC-CCcccchHHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEec
Q 018172 115 DGDANTF---------DKNNGAYIEVVNSPNN-PDGTIREAVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFT 184 (360)
Q Consensus 115 ~~~~~~~---------~~~~~~~~i~~~~p~N-PtG~~~~~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S 184 (360)
....+++ +.+.+ .+.+.-++|+ -+|+-+++ ...+.. +.++|+|..-.-.. --.+...-+++-.|
T Consensus 124 ~~~~~~~~~iP~~~~~~~~~~-~ayv~~~~NeTi~Gv~v~~-~p~~~~--~~~~v~D~SS~ils--r~iDvsk~dviyag 197 (365)
T COG1932 124 RIEEAGYGSIPDLSKWDFSDN-DAYVHFCWNETISGVEVPE-LPDIGS--DGLLVADASSAILS--RPIDVSKYDVIYAG 197 (365)
T ss_pred ceeccCccCCCChhhcccCCC-ccEEEEecCCcccceEccC-CCCCCC--CceEEEecccHHhc--CCCChhHcceEEEe
Confidence 1111111 11222 3223333444 47777762 111122 38888997633111 11133344677889
Q ss_pred cccccCCCCceEEEEeecCHHHHHHHHHHH------------hhcccc-CChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 185 LSKCTGHAGSRIGWALVKDTEVARKMTRFI------------ELGSIG-VSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 185 ~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~------------~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
.-|.+|..| ++.++. .++++++++... ...+++ ++.++-+.+...++.+..+ .-++.+.++-
T Consensus 198 aQKnlGpaG--ltvvIv-r~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~--GGl~~~~~rn 272 (365)
T COG1932 198 AQKNLGPAG--LTVVIV-RPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQ--GGLEALEARN 272 (365)
T ss_pred hhhccCccc--eEEEEE-cHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHc--CCHHHHHHHH
Confidence 999999888 787887 788888875531 112233 4445555555577766665 8889999999
Q ss_pred HHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEE
Q 018172 252 SERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARV 328 (360)
Q Consensus 252 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~ 328 (360)
+++.+.|++.+.+.++..-.... ..++..+ +.+.+.+. ..+...++++|+...-|+. ..+.+|.
T Consensus 273 ~~ka~~LY~~id~s~fy~~~v~~---------~~RS~mn-V~f~~~~~~ld~~fv~eae~~gl~~lkGhr---~vgGmRa 339 (365)
T COG1932 273 QAKAQLLYDWIDKSDFYRNLVAK---------ANRSRMN-VTFTLVDAELDKGFVAEAEAAGLIYLKGHR---SVGGLRA 339 (365)
T ss_pred HHHHHHHHHHHHhCCccccccch---------hhcccee-EEEEcCcHHHHHHHHHHHHHcCCceecccc---CCCceee
Confidence 99999999999888654432211 1122222 34444443 4456666677777666632 2445999
Q ss_pred EecC--ChHHHHHHHHHHHHHHhch
Q 018172 329 SMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 329 s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
|+.. +.|+++.+++-++.+.++.
T Consensus 340 siynA~~~e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 340 SIYNAVPLEDVEALTDFMDWFEETY 364 (365)
T ss_pred eeecCCCHHHHHHHHHHHHHHHHhh
Confidence 9966 8899999999998887653
No 381
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.22 E-value=0.00044 Score=63.69 Aligned_cols=292 Identities=14% Similarity=0.049 Sum_probs=168.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEc-CChHHHHHH---HHHhh-cCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIG-TGSTQLYQA---ALYAL-SSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYK 113 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t-~G~t~~l~~---~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~ 113 (360)
.++-..+.+|+.... --|.|.+- +.++++=+. ++... ...|+..+..+|+|+-.|.-....+.+.|.+++.
T Consensus 108 l~li~~Lq~~L~~IT----G~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~ 183 (496)
T COG1003 108 LELIYELQEWLKEIT----GMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVV 183 (496)
T ss_pred HHHHHHHHHHHHHhc----CCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEE
Confidence 666667777765321 12334433 223333222 23333 3445544556999999999999999999999999
Q ss_pred ecCCcccccc--------CCCeeEEEEcCCCCCCcccch--HHHHHHhhhcCcEEEEeecccCCC-CCcCCCCCCccEEE
Q 018172 114 WDGDANTFDK--------NNGAYIEVVNSPNNPDGTIRE--AVLAKVNRSAEGKLIHDLAYYWPQ-YTPITGAADHDIML 182 (360)
Q Consensus 114 ~~~~~~~~~~--------~~~~~~i~~~~p~NPtG~~~~--~~~~~~~~~~~~~li~D~ay~~~~-~~~~~~~~~~~i~~ 182 (360)
++.+.+|... ++++.++.+++|| -.|+.-. .++.++-.++|..+..|-|-.... -..-++..+.+++=
T Consensus 184 V~~~~~G~VDlddLk~k~~~~~AalMiTnPs-T~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~H 262 (496)
T COG1003 184 VKCDENGNVDLDDLRAKAEDNLAALMITNPS-TLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVH 262 (496)
T ss_pred EecCCCCCccHHHHHHHhccceeEEEeccCc-ccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEE
Confidence 9987665432 4788899999997 3566543 344444445999999999844211 12234567778888
Q ss_pred eccccccCCCCce----EEEEeecCHHHHHHHHH----HH--h-------------hccccCChHHHHHHHHHhcccCCC
Q 018172 183 FTLSKCTGHAGSR----IGWALVKDTEVARKMTR----FI--E-------------LGSIGVSKESQLRAAKILGIVSDD 239 (360)
Q Consensus 183 ~S~sK~~~~~G~r----~G~~~~~~~~~~~~l~~----~~--~-------------~~~~~~~~~~~~~~~~~l~~~~~~ 239 (360)
.-++|+|..|.=. .|=|.. ...++..|-. .. . ....-.|......+...+..+ +.
T Consensus 263 lNLHKTF~iPHGGGGPG~GPvgV-k~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~m-G~ 340 (496)
T COG1003 263 LNLHKTFCIPHGGGGPGAGPVGV-KAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMM-GA 340 (496)
T ss_pred eecccccccCCCCCCCCCCceeh-HhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHHHHHH-hH
Confidence 8999999765311 222332 2333333321 00 0 000012223333333333322 21
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCcccC-CCCC-cccccccccCCCCCCccccc-CCc-----hHHHHHHHHhhCe
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSGVFGLP-EYPL-EYCNFTGKFTNSHPGFAWLE-SKE-----DEDCEKLLRAERI 311 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~l~~~gI 311 (360)
+-+.+.-+.---+..++.++|+.. +.++ .+.. ....+ .+..+ +.. ..++.++|...|+
T Consensus 341 --~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~----------ild~r~l~~~~Gv~~~DvAKrLlD~Gf 406 (496)
T COG1003 341 --DGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHEC----------ILDARPLKKETGVRALDVAKRLLDYGF 406 (496)
T ss_pred --HHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEE----------EeechHhHhhcCCcHHHHHHHHHhcCC
Confidence 555666666566677888888865 1121 1110 11111 11222 111 1888999999999
Q ss_pred eeeCCCCCCC-CCCeEEEEecC--ChHHHHHHHHHHHHHHhchh
Q 018172 312 MARGGRRFGA-DAKYARVSMLS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 312 ~~~pg~~f~~-~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
.. |-.+|.. -.+.+-+=.+- +++++|++++++.++.++..
T Consensus 407 Ha-PT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~ 449 (496)
T COG1003 407 HA-PTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEAD 449 (496)
T ss_pred CC-CcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 85 4345542 35566664433 77999999999999997754
No 382
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.12 E-value=0.00055 Score=62.95 Aligned_cols=279 Identities=10% Similarity=-0.016 Sum_probs=144.6
Q ss_pred HHHhhcCCCCCCCCcEEEcCChHH-HHHHHHHhhc--CCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC--cccc
Q 018172 47 NLHHVVDNAVSDGRHIVIGTGSTQ-LYQAALYALS--SPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD--ANTF 121 (360)
Q Consensus 47 ~~~~~~~~~~~~~~~i~~t~G~t~-~l~~~~~~l~--~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~ 121 (360)
+++..-|..-. ...++++.+|. .+.+++.++. ..++. |+.+.-.+..-.-++...|.+++.++.. .+.+
T Consensus 64 d~~~~~G~~~~--~~~~~vP~atgm~l~l~l~~l~~r~~a~~----Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l 137 (389)
T PF05889_consen 64 DALRLAGLRSV--KSCFVVPMATGMSLTLCLLALRMRPKAKY----VIWPRIDQKSCFKAIERAGLEPVVVENVLEGDEL 137 (389)
T ss_dssp HHHHHTTHTTH--CEEEEESS-HHHHHHHHHHHHHHHCT--E----EEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEE
T ss_pred HHHHHcCCccc--cceEEEecccccHHHHHHHHHhcccCCce----EEEeeccccchHHHHHhcCCeEEEeeccCCCCee
Confidence 45555455422 23555544333 2333444443 33555 8888877777777788889999887732 1112
Q ss_pred cc------------CCCeeEEEEcCCCCCCcccch--HHHHHHhhhcCcEEEEeecccCCCCCc---C--C-CCCCccEE
Q 018172 122 DK------------NNGAYIEVVNSPNNPDGTIRE--AVLAKVNRSAEGKLIHDLAYYWPQYTP---I--T-GAADHDIM 181 (360)
Q Consensus 122 ~~------------~~~~~~i~~~~p~NPtG~~~~--~~~~~~~~~~~~~li~D~ay~~~~~~~---~--~-~~~~~~i~ 181 (360)
.. .++..+.++++++--.+...+ +++.++|+++|+..|+-.||+-..... + . ....-+.+
T Consensus 138 ~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~ 217 (389)
T PF05889_consen 138 ITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAF 217 (389)
T ss_dssp EEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEE
T ss_pred eccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCccee
Confidence 11 235567777777655555555 467889999999999999998421100 0 0 12334678
Q ss_pred EeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHH
Q 018172 182 LFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQV 261 (360)
Q Consensus 182 ~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 261 (360)
+.|..|.|- -+..-+-+.+.++..+..+........+.. +.......++..-. ..+........+...++.+.
T Consensus 218 vqS~dkNF~-VPvGgai~As~~~~~i~~vs~~YpGRas~s--p~ld~~itLl~LG~----~g~~~ll~~r~~~f~~l~er 290 (389)
T PF05889_consen 218 VQSTDKNFM-VPVGGAIMASFDPSGILAVSKEYPGRASAS--PSLDLFITLLSLGC----TGYGALLKERKASFPYLKER 290 (389)
T ss_dssp EEEHHHHHC-EESSHEEEEESSHHHHHHHHHTSHSHBTSH--HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
T ss_pred eeecCCCEE-ecCCCcEEEecCHHHHHHHHHHhhhhhhcc--cchHHHHHHHHHhh----hHHHHHHHHHHHHHHHHHHH
Confidence 999999885 333445566667888888876543333333 22333333332111 22333333333333444444
Q ss_pred HHh----cCCcccCCCCCcccccccccCCCCCCcccccC------CchHHHHHHHHhhCee----eeCCCCCC------C
Q 018172 262 IRQ----SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLES------KEDEDCEKLLRAERIM----ARGGRRFG------A 321 (360)
Q Consensus 262 l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~gI~----~~pg~~f~------~ 321 (360)
|++ ++......|.... ...+.++. ++..++...|..++|. +.|+..+. .
T Consensus 291 l~~~aee~~e~ll~~p~N~i-----------s~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~y 359 (389)
T PF05889_consen 291 LKKWAEEVGERLLETPRNHI-----------SMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNY 359 (389)
T ss_dssp HHHHHHHTTEEBSSSTT-SS-----------EEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--
T ss_pred HHHHHHHhhhhhcCCCCCCe-----------eEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCC
Confidence 433 3211111121111 00111111 1227888888898875 33332221 1
Q ss_pred CCCeEEEEe--cCChHHHHHHHHHHHHHHh
Q 018172 322 DAKYARVSM--LSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 322 ~~~~~R~s~--~~~~e~~~~~~~~l~~~~~ 349 (360)
...|+-+.- +.++||++.++++|+++++
T Consensus 360 p~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 360 PCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 236777732 3399999999999999874
No 383
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.08 E-value=0.00084 Score=61.66 Aligned_cols=295 Identities=14% Similarity=0.102 Sum_probs=165.9
Q ss_pred HHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC--C-----CC--CCCceEEEeCCCCCCcHHHHHHhC---Ceee
Q 018172 45 INNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS--P-----GG--PEPISVVSAAPYYSQYPAETDYLR---SGLY 112 (360)
Q Consensus 45 la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~--~-----gd--~~~~~vl~~~p~~~~~~~~~~~~g---~~~~ 112 (360)
+++.....|.+.. .|.|+.-.|+.+.++.+..+=.+ | |- -.+-...+++-+|-++...+..+| ..++
T Consensus 147 l~km~~ivGw~~~-~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~ 225 (510)
T KOG0629|consen 147 LAKMREIVGWEEG-GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCI 225 (510)
T ss_pred HHHHHHHhCCCCC-CCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeE
Confidence 3444444455444 35566666666665554433211 1 11 111124566788999999999998 6778
Q ss_pred eecCCcccccc-C----------CC---eeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcC-----
Q 018172 113 KWDGDANTFDK-N----------NG---AYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPI----- 172 (360)
Q Consensus 113 ~~~~~~~~~~~-~----------~~---~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~----- 172 (360)
.++.+..|-.. + .+ +-.|..+.-+---|..-+ ..+..+|++|+.|+.+|.|++++-..+.
T Consensus 226 ~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~k 305 (510)
T KOG0629|consen 226 KVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHK 305 (510)
T ss_pred EecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhh
Confidence 88877554221 1 11 223332222334444444 5677889999999999999987433332
Q ss_pred -CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccc-----------cCChHHHHH-------HHHHh
Q 018172 173 -TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSI-----------GVSKESQLR-------AAKIL 233 (360)
Q Consensus 173 -~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~-----------~~~~~~~~~-------~~~~l 233 (360)
.+.....=+..+.+|..| ..+.++.++.+.+.+.++........-+ +.....|-. .+-++
T Consensus 306 l~Giera~SvtwnpHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmw 384 (510)
T KOG0629|consen 306 LTGIERANSVTWNPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMW 384 (510)
T ss_pred ccCccccCceeecHHHhhc-CcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHH
Confidence 223333346778899999 7888888777556666665433211000 112222222 33333
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCccc-CC--CCCcccccccccCCCCCCcccccCCch--------HHH
Q 018172 234 GIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGL-PE--YPLEYCNFTGKFTNSHPGFAWLESKED--------EDC 302 (360)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 302 (360)
+. ++ ..-.++..+.+-+..+++.+.|++.++... .. |+=...+|+.....-. -|-.-++. ..+
T Consensus 385 ka--KG-~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR---~~~~~~e~~~rL~kVaPkI 458 (510)
T KOG0629|consen 385 KA--KG-TQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLR---GWQENPERDSRLVKVAPKI 458 (510)
T ss_pred Hh--cc-cccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhc---cCcccchhhhHHHhhCcHH
Confidence 31 22 266788888899999999999999876443 22 2222233331100000 00000010 334
Q ss_pred HHHHHhhCeeeeCCCCCCCCCCeEEEEecC---ChHHHHHHHHHHHHH
Q 018172 303 EKLLRAERIMARGGRRFGADAKYARVSMLS---REEIFNIFLERLSAI 347 (360)
Q Consensus 303 ~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~---~~e~~~~~~~~l~~~ 347 (360)
...+.++|-....-.+.+..++++|+.++. +.++++-+++-|..+
T Consensus 459 K~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 459 KERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred HHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 566667776665434444457799998855 678888888888765
No 384
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.05 E-value=0.00039 Score=61.12 Aligned_cols=298 Identities=9% Similarity=0.009 Sum_probs=168.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH----HHHHHhCCeeee-
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP----AETDYLRSGLYK- 113 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~----~~~~~~g~~~~~- 113 (360)
+..-..++...|. .+.+|.+.++-|--++.++.++.+|..+ +-+++++.-.|++-+ +.++..|..+..
T Consensus 114 e~il~l~~~iVGA------~e~EvavmNsLTvNlh~Ll~sFyKPTek-R~KILlE~kaFPSDhYAiesQ~~lhG~~~e~s 186 (465)
T KOG3846|consen 114 EPILPLLAPIVGA------QENEVAVMNSLTVNLHSLLISFYKPTEK-RFKILLEKKAFPSDHYAIESQCKLHGISPENS 186 (465)
T ss_pred hhhhhhhhhhccC------CchhhhhHhhhhhHHHHHHHHhcCCcch-hhhhhhccCCCCchHHHHHhhhhhcCCChHHh
Confidence 3344444555554 5668999999999999999999988764 345888887777654 445555666432
Q ss_pred -ecCCcc----cc---------ccC-CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCC
Q 018172 114 -WDGDAN----TF---------DKN-NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAAD 177 (360)
Q Consensus 114 -~~~~~~----~~---------~~~-~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~ 177 (360)
+.+.+. .+ +.+ +...+|+.+..+.-||..++ ..+-...+.+|.++=.|-||+.+..+-..-.++
T Consensus 187 m~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWg 266 (465)
T KOG3846|consen 187 MIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWG 266 (465)
T ss_pred eEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecC
Confidence 122211 11 112 35667788999999999988 444455556899999999999776666667788
Q ss_pred ccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhc------------------------cccCChHHHHHHHHHh
Q 018172 178 HDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELG------------------------SIGVSKESQLRAAKIL 233 (360)
Q Consensus 178 ~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~------------------------~~~~~~~~~~~~~~~l 233 (360)
.++..+.--|.+....=.+|.+........+.+.+....+ .++++-+.-.++...|
T Consensus 267 VDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SL 346 (465)
T KOG3846|consen 267 VDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSL 346 (465)
T ss_pred CceEEEeeecccccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhH
Confidence 8898888888664211123333332222222222222111 1123223333333344
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCCCcccccccc-cCCCCCCcccccCCch-HHHHHHHHhhC
Q 018172 234 GIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFG-LPEYPLEYCNFTGK-FTNSHPGFAWLESKED-EDCEKLLRAER 310 (360)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~l~~~g 310 (360)
+.... .-+++.|++-.-..-++...++..-+.. -..-..-+..++.. .....+.-+.+.+..+ ..+...|.++|
T Consensus 347 e~F~q---~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp~~~vfqeL~krG 423 (465)
T KOG3846|consen 347 ELFAQ---FNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSPTPKVFQELHKRG 423 (465)
T ss_pred HHHHH---hhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCCchHHHHHHHHcC
Confidence 43221 3355555543333333333333221100 00000001111110 0112233445555555 88899999999
Q ss_pred eeeeCCCCCCCCCCeEEEEecC---ChHHHHHHHHHHHHHHhch
Q 018172 311 IMARGGRRFGADAKYARVSMLS---REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 311 I~~~pg~~f~~~~~~~R~s~~~---~~e~~~~~~~~l~~~~~~~ 351 (360)
+.+-- - -++.+|+.... +-.++-+++.+|.+++...
T Consensus 424 v~~Dk---R--~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~ 462 (465)
T KOG3846|consen 424 VIGDK---R--RPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKL 462 (465)
T ss_pred eeccc---c--CCCceEeecchhhccHHHHHHHHHHHHHHHHHh
Confidence 97532 1 36789998655 7899999999999988653
No 385
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=97.99 E-value=0.00085 Score=66.35 Aligned_cols=175 Identities=10% Similarity=0.000 Sum_probs=110.0
Q ss_pred eEEEeCCCCCCcHHHHHHhCC---eeeeecCCcc-ccccC-------------CCeeEEEEcCCCCCCcccch-HHHHHH
Q 018172 89 SVVSAAPYYSQYPAETDYLRS---GLYKWDGDAN-TFDKN-------------NGAYIEVVNSPNNPDGTIRE-AVLAKV 150 (360)
Q Consensus 89 ~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~~-------------~~~~~i~~~~p~NPtG~~~~-~~~~~~ 150 (360)
+++++.-.|.++..++..+|+ .++.+|.|.+ .++.+ ..+-+|+-+..+-.+|.+=+ +++.++
T Consensus 224 ~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l 303 (608)
T TIGR03811 224 KWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVAL 303 (608)
T ss_pred EEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHH
Confidence 488888889999999999998 5788887644 23221 12345666777778999876 566666
Q ss_pred h---hhcCc--EEEEeecccCCC---CCc-------C----------------------------CCCCCccEEEecccc
Q 018172 151 N---RSAEG--KLIHDLAYYWPQ---YTP-------I----------------------------TGAADHDIMLFTLSK 187 (360)
Q Consensus 151 ~---~~~~~--~li~D~ay~~~~---~~~-------~----------------------------~~~~~~~i~~~S~sK 187 (360)
| +++|+ |+.+|.||++.. +.+ . .+....+=+...+||
T Consensus 304 ~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK 383 (608)
T TIGR03811 304 RNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHK 383 (608)
T ss_pred HHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCccc
Confidence 5 55887 699999999631 111 0 012234456778999
Q ss_pred ccCCCCceEEEEeecCHHHHHHHHHHHhhc--------------cccCChHH--HHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 188 CTGHAGSRIGWALVKDTEVARKMTRFIELG--------------SIGVSKES--QLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 188 ~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~--------------~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
.+. ....+|.++.++.++.+.+.....+. +...+.++ ...+...++.+--+ .+-+.++.++.
T Consensus 384 ~g~-~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G-~~Gyg~~i~~~ 461 (608)
T TIGR03811 384 MGY-IPYSAGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLN-VTGYGKLIGAS 461 (608)
T ss_pred ccc-cCCCeEEEEEeCHHHHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcC-HHHHHHHHHHH
Confidence 665 66778988887877666553211110 11122222 23333344332101 26777888888
Q ss_pred HHHHHHHHHHHHhc
Q 018172 252 SERWNMLRQVIRQS 265 (360)
Q Consensus 252 ~~~~~~l~~~l~~~ 265 (360)
.+..+++.+.|+..
T Consensus 462 i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 462 IEGAHRFYDFLNNL 475 (608)
T ss_pred HHHHHHHHHHHHhc
Confidence 88889999999885
No 386
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.97 E-value=0.00077 Score=59.11 Aligned_cols=179 Identities=16% Similarity=0.129 Sum_probs=106.7
Q ss_pred HHhhhcCcEEEEeecccCCCCCcCC----CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHH--HHhhccccCC
Q 018172 149 KVNRSAEGKLIHDLAYYWPQYTPIT----GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTR--FIELGSIGVS 222 (360)
Q Consensus 149 ~~~~~~~~~li~D~ay~~~~~~~~~----~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~--~~~~~~~~~~ 222 (360)
..-+.+|.+.|.||++.+.+...-- ..++-+--+-++.|-.| .|..++.+++ ..++.+.+.. .-.+.+++.|
T Consensus 237 ~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmG-NGhPVa~Vat-tkeIA~Af~atgv~YFNTyGGn 314 (452)
T KOG1403|consen 237 DAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMG-NGHPVAAVAT-TKEIAQAFHATGVEYFNTYGGN 314 (452)
T ss_pred HHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCC-CCCeeeEEec-cHHHHHHhccccceehhccCCC
Confidence 3344589999999998743211110 11222222556779999 9999999998 8999999865 3345788999
Q ss_pred hHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHH-hcCCcccCCCCCcccccccccCCCCCCcccccCC----
Q 018172 223 KESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIR-QSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK---- 297 (360)
Q Consensus 223 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 297 (360)
+.+..+..+.++...+ +-+....+++-+..+.+...++ +++.+. -+++.+.|+.+++-
T Consensus 315 PVsCAv~laVm~v~e~---E~Lq~ha~~vG~~L~~lL~~~k~kh~~IG--------------DvRGvGLFiGIdLVkD~~ 377 (452)
T KOG1403|consen 315 PVSCAVGLAVMRVCED---ENLQEHAQQVGEKLEVLLRRLKQKHECIG--------------DVRGVGLFIGIDLVKDRK 377 (452)
T ss_pred chhHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHhhhcccee--------------ccccceEEEeeeeecccc
Confidence 9999999998886554 4444444444444444444443 232111 12345556666652
Q ss_pred ----ch---HHHHHHHHhh-CeeeeCCCCCCCCCCeEEE--EecCChHHHHHHHHHHHHHHh
Q 018172 298 ----ED---EDCEKLLRAE-RIMARGGRRFGADAKYARV--SMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 298 ----~~---~~~~~~l~~~-gI~~~pg~~f~~~~~~~R~--s~~~~~e~~~~~~~~l~~~~~ 349 (360)
+. ..+...|++. +|++.. -|+..+.+.| .++.++|+.++.+..|.+++.
T Consensus 378 tRtP~tk~A~~~v~rlke~y~VLlsa---DGPh~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 378 TRTPDTKEAHWVVNRLKELYRVLLSA---DGPHRNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred cCCCcHHHHHHHHHHHHHhhhEEEec---CCCCCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 21 2234455554 687653 2223444554 233477777777777777764
No 387
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.93 E-value=0.0039 Score=64.07 Aligned_cols=229 Identities=13% Similarity=0.048 Sum_probs=133.9
Q ss_pred eEEEeCCCCCCcHHHHHH----hCCeeeeecCCccccccCCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeec
Q 018172 89 SVVSAAPYYSQYPAETDY----LRSGLYKWDGDANTFDKNNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLA 163 (360)
Q Consensus 89 ~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~a 163 (360)
+|++++-.|+.+..+++. .|++++.- |.+.+ .+.++.++++.+|| -.|.+.+ +.+.++++++|.+++ +.+
T Consensus 170 ~~~v~~~~hP~~~~v~~t~~~~~g~~i~~~--~~~~~-~~~~~~~v~vq~P~-~~G~i~d~~~i~~~~h~~gal~~-~~~ 244 (954)
T PRK12566 170 RFFVDEHCHPQTLSVLRTRAEGFGFELVVD--AVDNL-AAHAVFGALLQYPD-THGEIRDLRPLIDQLHGQQALAC-VAA 244 (954)
T ss_pred EEEECCCCCHHHHHHHHHhhhcCCcEEEEc--chhhc-CCCCEEEEEEECCC-CceEEccHHHHHHHHHHcCCEEE-EEe
Confidence 499999999888776554 47776652 22222 23468889999997 5898866 556566666788755 332
Q ss_pred cc-CCCCCcCCCCCCccEEEeccccccCC----CCceEEEEeecCHHHHHHH----------------------------
Q 018172 164 YY-WPQYTPITGAADHDIMLFTLSKCTGH----AGSRIGWALVKDTEVARKM---------------------------- 210 (360)
Q Consensus 164 y~-~~~~~~~~~~~~~~i~~~S~sK~~~~----~G~r~G~~~~~~~~~~~~l---------------------------- 210 (360)
-- .-....-++..+.+|++++.. .||. .|=-.||+.+ ..++.+.+
T Consensus 245 d~laL~ll~~Pge~GADI~vG~~Q-~fGvp~~~GGP~ag~~a~-~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHI 322 (954)
T PRK12566 245 DLLSLLVLTPPGELGADVVLGSTQ-RFGVPMGYGGPHAAYFAC-RDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHI 322 (954)
T ss_pred CHHHHhCCCChhhcCCcEEeeCCC-cCCCCCCCCCCCeeeeee-hHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHh
Confidence 10 012223347888898877432 2332 2223678877 56665544
Q ss_pred HHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCC
Q 018172 211 TRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPG 290 (360)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (360)
++.+.....|++.--...++.+.....+. +-+.++.++...+..++.+.|.+. ++.+... .+ |.
T Consensus 323 RReKAtSNICT~qaL~A~~a~~Y~~~~Gp--~Gl~~ia~~~~~~a~~l~~~l~~~-g~~~~~~--~f--F~--------- 386 (954)
T PRK12566 323 RREKANSNICTAQVLLANIAGFYAVYHGP--EGLKRIAQRVHRLTAILAAGLEAK-GIKRLNR--HF--FD--------- 386 (954)
T ss_pred hhccccchhhHHHHHHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHHHHHHHHhc-CCccccC--Cc--cc---------
Confidence 22222222222221111111111111232 668888888888999999999885 4554321 11 00
Q ss_pred cccccCC-chHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC--ChHHHHHHHHHHH
Q 018172 291 FAWLESK-EDEDCEKLLRAERIMARGGRRFGADAKYARVSMLS--REEIFNIFLERLS 345 (360)
Q Consensus 291 ~~~~~~~-~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~--~~e~~~~~~~~l~ 345 (360)
-+.+++. +.+.+.+...+.||-++- . +++.+.+|+.- +.++++.+++.+.
T Consensus 387 ~~~v~~~~~~~~~~~~a~~~~~n~r~---~--~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 387 TLTLEVGGAQAAIIESAEAARINLRI---L--GRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred eEEEEccCCHHHHHHHHHHCCCeeEE---e--CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 1334443 236666777788998874 2 35578888844 7899999988884
No 388
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.91 E-value=0.0047 Score=55.81 Aligned_cols=256 Identities=14% Similarity=0.084 Sum_probs=145.2
Q ss_pred ChHHHHHHHHHhhcCCCCCCCceEEEeC---CCCCCcHHHHHHhCCeee---------eecCCc-------ccccc---C
Q 018172 67 GSTQLYQAALYALSSPGGPEPISVVSAA---PYYSQYPAETDYLRSGLY---------KWDGDA-------NTFDK---N 124 (360)
Q Consensus 67 G~t~~l~~~~~~l~~~gd~~~~~vl~~~---p~~~~~~~~~~~~g~~~~---------~~~~~~-------~~~~~---~ 124 (360)
+++.++..+..++++|+++ +.--+ -.|...--... +-++. +..+|+ +.++. +
T Consensus 114 SGSPANfavYtall~Ph~R----iMGLDLP~GGHLsHGy~T~--~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~ 187 (477)
T KOG2467|consen 114 SGSPANFAVYTALLKPHER----IMGLDLPSGGHLSHGYQTP--TKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATL 187 (477)
T ss_pred CCCchhhHHHhhhcCCCCe----eeeccCCCCCccccccccC--CceeeeeeeecccCceeeCCCCCceehHHHHHHHHh
Confidence 4477778999999999987 66433 33322211111 11111 111222 22222 2
Q ss_pred CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC--CCcCCC-CCCccEEEeccccccCCCCceEEEEe
Q 018172 125 NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ--YTPITG-AADHDIMLFTLSKCTGHAGSRIGWAL 200 (360)
Q Consensus 125 ~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~--~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~~~ 200 (360)
-++|+|+...-..+- .++ +.++++|.+-|.+++.|-+|.-+- ...+++ -..++|+..+.+|++ .|=|.|.|-
T Consensus 188 frPk~iiaG~SaY~R--~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTHKsL--RGPRg~mIF 263 (477)
T KOG2467|consen 188 FRPKLIIAGTSAYSR--LIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTHKSL--RGPRGAMIF 263 (477)
T ss_pred cCCcEEEeccccchh--hccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeeccccccc--cCCcceeEE
Confidence 477888754322110 011 467789999999999999987310 011111 234688999999986 577777665
Q ss_pred ecC--------------HHHHHHHHHHHhhcc-ccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhc
Q 018172 201 VKD--------------TEVARKMTRFIELGS-IGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQS 265 (360)
Q Consensus 201 ~~~--------------~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 265 (360)
-.. -++-+.+.......- .++.-....+++.+|+.... ..+...++++..+...+.+.|.+.
T Consensus 264 yRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~t---pefk~Yq~qV~~Nakala~~l~~~ 340 (477)
T KOG2467|consen 264 YRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMT---PEFKEYQKQVLKNAKALASALISR 340 (477)
T ss_pred EeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCC---HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 421 123333332221111 12333333344445664433 667777777888888899999888
Q ss_pred CCcccCCCCCcccccccccCCCCCC-cccccCCc----hHHHHHHHHhhCeeeeCCCCCC----CCCCeEEEEe---cC-
Q 018172 266 GVFGLPEYPLEYCNFTGKFTNSHPG-FAWLESKE----DEDCEKLLRAERIMARGGRRFG----ADAKYARVSM---LS- 332 (360)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~l~~~gI~~~pg~~f~----~~~~~~R~s~---~~- 332 (360)
+...+.. +.-| .+.+++.. +..+++.|..-+|.+.--..+| ..++.+|+.- +.
T Consensus 341 Gy~lvtg--------------GTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsR 406 (477)
T KOG2467|consen 341 GYKLVTG--------------GTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSR 406 (477)
T ss_pred CceEecC--------------CccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhccc
Confidence 5322211 1112 35566543 2778888888888865433343 3578899963 22
Q ss_pred --ChHHHHHHHHHHHHHHh
Q 018172 333 --REEIFNIFLERLSAIQG 349 (360)
Q Consensus 333 --~~e~~~~~~~~l~~~~~ 349 (360)
.++|+++..+-|.+.+.
T Consensus 407 G~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 407 GFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred CccHHHHHHHHHHHHHHHH
Confidence 67888888888777764
No 389
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=97.65 E-value=0.0015 Score=57.38 Aligned_cols=156 Identities=14% Similarity=0.119 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEE---EcCChHHHHHHHHHhhcCCCCCCCceEEEe-CCCCCCcHHH----------H
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIV---IGTGSTQLYQAALYALSSPGGPEPISVVSA-APYYSQYPAE----------T 104 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~---~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~-~p~~~~~~~~----------~ 104 (360)
..|.+..|+-++. +..++ +.+ +|+++..++..+++|||+ .+.. ---|.-.+.+ +
T Consensus 68 dtLe~vyA~vf~a-------E~a~VRpq~is-GTHAI~~aLfg~LRpgDe----ll~i~G~PYDTLeevIG~rg~~~gSL 135 (416)
T COG4100 68 DTLERVYAQVFGA-------EAALVRPQIIS-GTHAIACALFGILRPGDE----LLYITGSPYDTLEEVIGLRGEGQGSL 135 (416)
T ss_pred hHHHHHHHHHhcc-------ccceeeeeeec-chhHHHHHHHhccCCCCe----EEEecCCcchhHHHHhccCCCCcccH
Confidence 7788888888874 22222 445 489999999999999998 5543 2334444444 3
Q ss_pred HHhCCeeeeecCCcccc-c-----c--CCCeeEEEEcCCCCCCcccc------h--HHH-HHHhh-hcCcEEEEeecccC
Q 018172 105 DYLRSGLYKWDGDANTF-D-----K--NNGAYIEVVNSPNNPDGTIR------E--AVL-AKVNR-SAEGKLIHDLAYYW 166 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~~~-~-----~--~~~~~~i~~~~p~NPtG~~~------~--~~~-~~~~~-~~~~~li~D~ay~~ 166 (360)
+..|...+.+++..++- + . +++||+|-+.-. +|+.+ . +++ ..+.+ ..++++.+|++|++
T Consensus 136 ~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~~tkli~IQRS---~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGE 212 (416)
T COG4100 136 KDFGIKYKAVPLTADGKIDIQAVKTAISDRTKLIGIQRS---KGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGE 212 (416)
T ss_pred HHhCcceeecccccCCcccHHHHHHhcCccceEEEEEec---cCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchh
Confidence 33455555666553322 1 1 578999977542 33332 2 222 22332 27889999999996
Q ss_pred CCCCcCCCCCCccEEEeccccccCCCCc-e-EEEEeecCHHHHHHHH
Q 018172 167 PQYTPITGAADHDIMLFTLSKCTGHAGS-R-IGWALVKDTEVARKMT 211 (360)
Q Consensus 167 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~-r-~G~~~~~~~~~~~~l~ 211 (360)
.--..-+..-+.++..+|+-|.-| .|+ . .||+.+ ..+++++..
T Consensus 213 FvE~~EPt~vGaDliAGSLIKNpG-GgiaktGGYiaG-k~~~ve~~~ 257 (416)
T COG4100 213 FVEEKEPTHVGADLIAGSLIKNPG-GGIAKTGGYIAG-KAELVEAAA 257 (416)
T ss_pred hhhccCccccchhhhccceeeCCC-Cceeeccceeec-hHHHHHhhc
Confidence 544445566778899999999765 221 1 267777 788887764
No 390
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.44 E-value=0.0026 Score=57.13 Aligned_cols=198 Identities=14% Similarity=0.105 Sum_probs=119.1
Q ss_pred CeeEEEEcCC-CCCCccc-ch----HHHHHHhhhcCcEEEEeecccCCCCCc-CCC--C--CCccEEEeccccccCCCCc
Q 018172 126 GAYIEVVNSP-NNPDGTI-RE----AVLAKVNRSAEGKLIHDLAYYWPQYTP-ITG--A--ADHDIMLFTLSKCTGHAGS 194 (360)
Q Consensus 126 ~~~~i~~~~p-~NPtG~~-~~----~~~~~~~~~~~~~li~D~ay~~~~~~~-~~~--~--~~~~i~~~S~sK~~~~~G~ 194 (360)
.+.+-++.-| +..-|-. .+ ..++.++++|++.+|+||++.+++... +-. . .+.-.-+-+|||-|- +|
T Consensus 270 ~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q-~g- 347 (484)
T KOG1405|consen 270 KPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQ-TG- 347 (484)
T ss_pred CCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehhhhhh-cC-
Confidence 3555455555 3344433 22 467788999999999999998643322 111 0 111112457888776 66
Q ss_pred eEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Q 018172 195 RIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYP 274 (360)
Q Consensus 195 r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 274 (360)
||.. +++++-. ..++.+.++...+.-...+.++++.+.+. ..+++....=......|.+.-+++|+..-
T Consensus 348 --Gffh--~~~frpn-~pYrifNTWmGdP~k~lll~~vv~~I~~~--~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~---- 416 (484)
T KOG1405|consen 348 --GFFH--DEEFRPN-EPYRIFNTWMGDPSKNLLLEEVVQEIKRE--DLLNNVAHVGKALLKGLLELQAKYPGKIN---- 416 (484)
T ss_pred --cccc--CcccCCC-chHHHhhhhcCChHHHHHHHHHHHHHhHH--HHHHHHHHHHHHHHHHHHHHHHhCchhhh----
Confidence 6664 3443322 22333455666666666677777766553 66666665555555555555455543211
Q ss_pred CcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEE--ecCChHHHHHHHHHHHHHHh
Q 018172 275 LEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARVS--MLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s--~~~~~e~~~~~~~~l~~~~~ 349 (360)
-.++.+.|+-.+++++ +.+...++-+|+.+-. ++...+||- +.-++.-.+-+++++.+++.
T Consensus 417 ---------~~RGrGTF~a~d~ps~~~Rdk~i~~~~~nGv~~GG-----Cg~~siRfRPsLvf~~~Ha~i~l~~~~k~l~ 482 (484)
T KOG1405|consen 417 ---------NLRGRGTFIAWDCPSGSIRDKLILIARLNGVNLGG-----CGDKSIRFRPSLVFRKHHADIFLDIFDKILA 482 (484)
T ss_pred ---------cccccceEEEEeCCChHHHHHHHHHHHHcCceecc-----cccceeeeccceeehhhhHHHHHHHHHHHhc
Confidence 1235666889999887 6677788888887532 235567774 43377778889999988875
Q ss_pred c
Q 018172 350 G 350 (360)
Q Consensus 350 ~ 350 (360)
.
T Consensus 483 ~ 483 (484)
T KOG1405|consen 483 G 483 (484)
T ss_pred c
Confidence 3
No 391
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.17 E-value=0.0085 Score=55.80 Aligned_cols=128 Identities=18% Similarity=0.071 Sum_probs=76.1
Q ss_pred cHHHHHHHHHHHhhc-CCC-------CCCCCcEEEcCChHHHHHHHHHhh------cCCCC---CC-----CceEEEeCC
Q 018172 38 VPELAEAINNLHHVV-DNA-------VSDGRHIVIGTGSTQLYQAALYAL------SSPGG---PE-----PISVVSAAP 95 (360)
Q Consensus 38 ~~~lr~~la~~~~~~-~~~-------~~~~~~i~~t~G~t~~l~~~~~~l------~~~gd---~~-----~~~vl~~~p 95 (360)
+.||+..+.+|++.- +.+ ......|+-++.+-..+-.++.+= .+.+. ++ .-.+..++.
T Consensus 111 ~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDq 190 (511)
T KOG0628|consen 111 CTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQ 190 (511)
T ss_pred hHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCc
Confidence 478888888876532 221 223345666655333333333321 12221 11 125778999
Q ss_pred CCCCcHHHHHHhCCeeeeecCCcc-cccc---------C---CCeeEEEEcCCCCCCccc-ch--HHHHHHhhhcCcEEE
Q 018172 96 YYSQYPAETDYLRSGLYKWDGDAN-TFDK---------N---NGAYIEVVNSPNNPDGTI-RE--AVLAKVNRSAEGKLI 159 (360)
Q Consensus 96 ~~~~~~~~~~~~g~~~~~~~~~~~-~~~~---------~---~~~~~i~~~~p~NPtG~~-~~--~~~~~~~~~~~~~li 159 (360)
.+.+.+..+...|.+.+.++.|.+ ++.. | .-+..+++.+.- -||.. .+ .++..+|+++++|+.
T Consensus 191 ahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~G-TT~~ca~D~l~elg~Vc~~~glWLH 269 (511)
T KOG0628|consen 191 AHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLG-TTSSCAFDELEELGPVCREEGLWLH 269 (511)
T ss_pred ccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeec-CccccccccHHHhcchhhhcCEEEE
Confidence 999999999999999999988753 2222 1 122233333321 23333 22 566778999999999
Q ss_pred EeecccC
Q 018172 160 HDLAYYW 166 (360)
Q Consensus 160 ~D~ay~~ 166 (360)
+|.||++
T Consensus 270 VDAAYAG 276 (511)
T KOG0628|consen 270 VDAAYAG 276 (511)
T ss_pred eehhhcc
Confidence 9999995
No 392
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=96.51 E-value=0.064 Score=47.05 Aligned_cols=285 Identities=14% Similarity=0.099 Sum_probs=154.7
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEc-CChHHHHHHHHHhhc--CCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIG-TGSTQLYQAALYALS--SPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKW 114 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t-~G~t~~l~~~~~~l~--~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~ 114 (360)
+.+.+..+.++++.. +...|++. .|+|.-...+..-|. +.|+.... |++-..+-..+..+-+......+.+
T Consensus 54 i~~tes~lreLlniP-----dn~~vlf~QGGGt~qFaAv~lNL~glK~g~~AdY-iVTGsWS~KA~~EAkk~~~~~~V~~ 127 (370)
T KOG2790|consen 54 INDTESLLRELLNIP-----DNYKVLFLQGGGTGQFAAVPLNLIGLKHGRCADY-VVTGSWSAKAAEEAKKYGTPNIVIP 127 (370)
T ss_pred HHHHHHHHHHHHcCC-----CceeEEEEeCCCcccccccchhhhccccCCccce-EEeccccHHHHHHHHhhCCceEEec
Confidence 466667777777752 23456654 666666666666564 45533211 3333222223333333322333333
Q ss_pred cC---------CccccccCCCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecc
Q 018172 115 DG---------DANTFDKNNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTL 185 (360)
Q Consensus 115 ~~---------~~~~~~~~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~ 185 (360)
+. |++.++.+++.+.+++|.-----|+-++..- +-.-++..+|.|-.--+-+.+. +-....++....
T Consensus 128 ~~k~y~ygkvPd~~~w~~~~da~yvyyCaNETVHGVEf~~~P--~~~~~~~vlVaDmSSnflSrpv--Dvsk~gvi~aGA 203 (370)
T KOG2790|consen 128 KLKSYTYGKVPDPSTWELNPDASYVYYCANETVHGVEFDFIP--VNDPKGAVLVADMSSNFLSRPV--DVSKFGVIFAGA 203 (370)
T ss_pred cccccccCcCCChhhcccCCCccEEEEecCceeeceecCCCC--CCCCCCceEEEecccchhcCCc--cchhcceEEecc
Confidence 32 3445555677777777653234566555322 1233788889987532211111 233345667788
Q ss_pred ccccCCCCceEEEEeecCHHHHHHHHHHH-----------hhccc-cCChHHHHHHHHHhcccCCCchhHHHHHHHHHHH
Q 018172 186 SKCTGHAGSRIGWALVKDTEVARKMTRFI-----------ELGSI-GVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSE 253 (360)
Q Consensus 186 sK~~~~~G~r~G~~~~~~~~~~~~l~~~~-----------~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 253 (360)
.|.+|+.|+-+ ++. ..+++....... ...-+ +++..+.+...-.++.+.+. .-++.+...-.+
T Consensus 204 QKN~G~aG~Tv--viv-r~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~--GGl~a~e~~n~~ 278 (370)
T KOG2790|consen 204 QKNVGPAGVTV--VIV-RKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEK--GGLAAMEKLNQE 278 (370)
T ss_pred ccccCccccEE--EEE-ehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhc--ccHHHHHHHHHH
Confidence 99999888543 333 344443322110 11111 24444555555555555444 778888888899
Q ss_pred HHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch----HHHHHHHHhhCeeeeCCCCCCCCCCeEEEE
Q 018172 254 RWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED----EDCEKLLRAERIMARGGRRFGADAKYARVS 329 (360)
Q Consensus 254 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s 329 (360)
+.+.+++.+.+..++.....+. .+++.- -+.+++.++ +++.+..+++=+.+ -|+. .-+.+|-|
T Consensus 279 KskllYd~iD~s~gfy~cpVe~--------~~RS~M-NV~Fri~~d~Le~eFLkeA~~~~mv~L-KGhR---SVGGiRAS 345 (370)
T KOG2790|consen 279 KSKLLYDAIDNSNGFYRCPVEP--------SVRSRM-NVPFRIEKDELEAEFLKEAAKEHMVQL-KGHR---SVGGIRAS 345 (370)
T ss_pred HHHHHHHHHHhcCCeEEcccch--------hhhhhc-ccceeecchHHHHHHHHHHHHhhhhcc-cccc---ccccchhh
Confidence 9999999999885544432221 112222 244555443 55555555443333 2321 24578999
Q ss_pred ecC--ChHHHHHHHHHHHHHHhc
Q 018172 330 MLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 330 ~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
+.. +-|+.++++.-++++.+.
T Consensus 346 lYNAisv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 346 LYNAISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred hhccccHHHHHHHHHHHHHHHHh
Confidence 855 888888888888888754
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=95.46 E-value=0.2 Score=43.56 Aligned_cols=196 Identities=13% Similarity=0.083 Sum_probs=100.8
Q ss_pred HHHHHHhhhcCcEEEEeecccCCCCCc---CC---CCCCccEEEeccccccCCCCceEEEEee-cCHHHHHHHHHHHhhc
Q 018172 145 AVLAKVNRSAEGKLIHDLAYYWPQYTP---IT---GAADHDIMLFTLSKCTGHAGSRIGWALV-KDTEVARKMTRFIELG 217 (360)
Q Consensus 145 ~~~~~~~~~~~~~li~D~ay~~~~~~~---~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~-~~~~~~~~l~~~~~~~ 217 (360)
+.+..+|..|++.-|+..+|+-.+-.. +. .-..-+.++.|+.|.|-.|- .|.+++ -...+++.+.+.....
T Consensus 177 eaiaaica~~diphivnnayglqsee~i~~iaa~~~~grida~vqsldknf~vpv--ggaiia~fk~n~iq~iak~ypgr 254 (432)
T KOG3843|consen 177 EAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAFVQSLDKNFMVPV--GGAIIAAFKDNFIQEIAKMYPGR 254 (432)
T ss_pred HHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhccHHHHHHHhhhcceeec--chhHhhHhHHHHHHHHHHhCCCc
Confidence 566777888999999999998432111 11 12333568999999997653 244433 3567777777654433
Q ss_pred cccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC
Q 018172 218 SIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK 297 (360)
Q Consensus 218 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (360)
....+.. -.....|..-...+.+.+.+..+.....+..+...-..++-..+-.|.... +. -+.+..-
T Consensus 255 asa~ps~--dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~~ae~~~e~l~~~p~n~i---------s~--amtl~ti 321 (432)
T KOG3843|consen 255 ASASPSL--DLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIKFAEAIGECLLETPENEI---------SL--AMTLKTI 321 (432)
T ss_pred cccCccH--HHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCchh---------hh--hhhhccC
Confidence 3333333 333333332233333444444444444444444444444322222232111 10 1122222
Q ss_pred ch------HHHHHHHHhhCee---eeCCC------------CCCC-----CCCeEEEE--ecCChHHHHHHHHHHHHHHh
Q 018172 298 ED------EDCEKLLRAERIM---ARGGR------------RFGA-----DAKYARVS--MLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 298 ~~------~~~~~~l~~~gI~---~~pg~------------~f~~-----~~~~~R~s--~~~~~e~~~~~~~~l~~~~~ 349 (360)
+. ..+-..|-.+||. ++|.. .|+. ..+|+-.. ++.+..++++++.+|...+.
T Consensus 322 ~~~k~kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~e~~~~yln~a~aigm~~hdld~~~~rl~~~~a 401 (432)
T KOG3843|consen 322 DEAKDKAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQHCAYLNAACAIGMKDHDLDEFFNRLDRCLA 401 (432)
T ss_pred ChHHhhHHHHHHHHHHhccccCceEeeccccceeeeceEEeccccccCcCchhHhhHHHhcCCcHhHHHHHHHHHHHHHH
Confidence 22 3344556666664 44421 1221 12233332 33378899999999998887
Q ss_pred chhccC
Q 018172 350 GSISNG 355 (360)
Q Consensus 350 ~~~~~~ 355 (360)
..+++.
T Consensus 402 ~~~ke~ 407 (432)
T KOG3843|consen 402 AFRKEL 407 (432)
T ss_pred HHHHHH
Confidence 766443
No 394
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=94.41 E-value=4.6 Score=39.98 Aligned_cols=250 Identities=15% Similarity=0.074 Sum_probs=139.2
Q ss_pred CCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCCcccccc-----------CCCeeEEEEcCCCCCCcccch---HH
Q 018172 81 SPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDANTFDK-----------NNGAYIEVVNSPNNPDGTIRE---AV 146 (360)
Q Consensus 81 ~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----------~~~~~~i~~~~p~NPtG~~~~---~~ 146 (360)
..|+.-+-.-++|...|.-....+.+.|.+++++..+.++-.. ..+-.++.++.|+ --|+.-+ +.
T Consensus 624 ~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPS-T~GvfE~~i~d~ 702 (1001)
T KOG2040|consen 624 SKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPS-THGVFEEGIDDI 702 (1001)
T ss_pred hccCCcceeEEEeecccCCChhhHHhcCCEEEEeeccCCCCccHHHHHHHHHHhhhhhheeEEeccc-ccccccccHHHH
Confidence 3344322336788889998999999999999999988664322 2345677888887 3565544 34
Q ss_pred HHHHhhhcCcEEEEeecccCC-CCCcCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHh----------
Q 018172 147 LAKVNRSAEGKLIHDLAYYWP-QYTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIE---------- 215 (360)
Q Consensus 147 ~~~~~~~~~~~li~D~ay~~~-~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~---------- 215 (360)
+..+.+ +|.-+..|.+-... .-..-++..+.+++=-.++|+|.+|.=..|=-.+ +-.+...|..+..
T Consensus 703 cd~iHe-hGGQVYlDGANMNAqVGlc~pGd~GaDV~HLNLHKTFcIPHGGGGPg~g-PIgVK~HLapfLP~HpVvs~~~~ 780 (1001)
T KOG2040|consen 703 CDIIHE-HGGQVYLDGANMNAQVGLCRPGDIGADVCHLNLHKTFCIPHGGGGPGMG-PIGVKKHLAPFLPSHPVVSPGRP 780 (1001)
T ss_pred HHHHHh-cCCEEEecCCCccceecccCCccccccceeecccceeeecCCCCCCCCC-ccchhhhccccCCCCCccCCCCC
Confidence 445555 99999999886531 1233446777888888899999765422222222 3233333322110
Q ss_pred -----hcccc----CChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcc-cccccccC
Q 018172 216 -----LGSIG----VSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEY-CNFTGKFT 285 (360)
Q Consensus 216 -----~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~ 285 (360)
..+.+ .+.......++.++.+ +. ..+....+.-.-+..++.++|..+=.+.+....+.- ..
T Consensus 781 ~~~~~~gsVsaaP~Gsa~ILpISwaYikmM-G~--~GL~~as~~AiLNaNYMakRLe~hYkil~~~~~~~vaHE------ 851 (1001)
T KOG2040|consen 781 EDTSPVGSVSAAPWGSALILPISWAYIKMM-GS--GGLKDASKIAILNANYMAKRLESHYKILFRGENGLVAHE------ 851 (1001)
T ss_pred CCCCCccceeccCCCcceeehhHHHHHHHh-cc--cccchhhHHHhhhhHHHHHHHhhccceeEecCCcceeee------
Confidence 01111 1111122223333322 11 333344444445566777888776223322222210 11
Q ss_pred CCCCCcccccC---C-----chHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 286 NSHPGFAWLES---K-----EDEDCEKLLRAERIMARGGRRFGADAKYARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 286 ~~~~~~~~~~~---~-----~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
| -+++ + +..++.++|..+|.-.... .|.. .+.+-+-.+- +.+++|++.+++-.+-++
T Consensus 852 -----F-IlD~r~fK~~agieavDvAKRL~DYgFHaPTm-swPV-~gtLMIEPTESE~k~ElDRfcdAliSIreE 918 (1001)
T KOG2040|consen 852 -----F-ILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTM-SWPV-AGTLMIEPTESEDKAELDRFCDALISIREE 918 (1001)
T ss_pred -----e-eeechhhccccCCcHHHHHHHHHhccCCCCcc-cccc-CCceEeccCccccHHHHHHHHHHHHHHHHH
Confidence 1 1222 1 1277888999999875333 3432 5566665433 679999999998776543
No 395
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=92.77 E-value=9.8 Score=37.83 Aligned_cols=226 Identities=13% Similarity=0.094 Sum_probs=121.8
Q ss_pred eEEEeCCCCCCcHHHHHH----hCCeeeeecCCcccccc-CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEee
Q 018172 89 SVVSAAPYYSQYPAETDY----LRSGLYKWDGDANTFDK-NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDL 162 (360)
Q Consensus 89 ~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~-~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ 162 (360)
++++...+|+....+++. +|++++.. |...... ..+...+++..|. --|.+.+ .++.+.+++.+.+++.--
T Consensus 207 k~vvd~~~hpqtlsV~~TRa~~~~i~v~~~--~~~~~~~s~~~v~gvlvQYP~-t~G~i~d~~el~~~a~~~~s~vv~at 283 (1001)
T KOG2040|consen 207 KFVVDSNCHPQTLSVVKTRAKGFGIKVVVS--DIKEADYSSKDVSGVLVQYPD-TEGSVLDFDELVELAHANGSLVVMAT 283 (1001)
T ss_pred eEEecCCCCcchhhhhhccccccceeEEec--CHHHhhccccceeEEEEEcCC-CCCcccCHHHHHHHhhccCceEEEee
Confidence 399999999999888765 24443322 3222222 3345567777775 3666766 677777877777766322
Q ss_pred cccCCCCCcCCCCCCccEEEeccccccCCCCceEEEEeecCHHH---HHHHHHHHhhc----------------------
Q 018172 163 AYYWPQYTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEV---ARKMTRFIELG---------------------- 217 (360)
Q Consensus 163 ay~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~---~~~l~~~~~~~---------------------- 217 (360)
-.-.-.+.--++..+.+|.++|... ||+| +||= ++...+ .+.+.+.....
T Consensus 284 DLLaLtiLrpPgefGaDIavGSsQR-FGVP---lGYG-GPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTRE 358 (1001)
T KOG2040|consen 284 DLLALTILRPPGEFGADIAVGSSQR-FGVP---LGYG-GPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTRE 358 (1001)
T ss_pred hhhHHHccCChhhcCceeeeccccc-cCcc---ccCC-CchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHH
Confidence 1111122223467788888888765 5543 2431 111111 11111111000
Q ss_pred -------cccCChHHHHHHHHH---hcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCC
Q 018172 218 -------SIGVSKESQLRAAKI---LGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNS 287 (360)
Q Consensus 218 -------~~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (360)
.-+.-..+|..++.+ .....+. ..++++.+++-...-+|...|++.+ .++...
T Consensus 359 QHIrRDKATSNICTAQALLANmaAmyaiYHGp--~gL~~IArrvh~~T~~l~~~l~~ag-hel~~k-------------- 421 (1001)
T KOG2040|consen 359 QHIRRDKATSNICTAQALLANMAAMYAIYHGP--HGLKEIARRVHNLTLILAEGLKNAG-HELQHK-------------- 421 (1001)
T ss_pred HHhhhhccchhhhHHHHHHHHHHHHHhhhcCc--HHHHHHHHHHHHHHHHHHHHHhhcc-hhhccc--------------
Confidence 001111233222221 1111122 6777777887777788888888664 222211
Q ss_pred CCCc--ccccCCch-HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC--ChHHHHHHHHHHH
Q 018172 288 HPGF--AWLESKED-EDCEKLLRAERIMARGGRRFGADAKYARVSMLS--REEIFNIFLERLS 345 (360)
Q Consensus 288 ~~~~--~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~--~~e~~~~~~~~l~ 345 (360)
..| +-+++... +++.+...+++|-++- + +++.+-+++-- +++|++.++..+.
T Consensus 422 -~fFDTLkI~~~~s~~~~l~rA~~~~iNlr~---~--ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 422 -PFFDTLKIRCGCSAEEVLDRAAKRQINLRL---V--EDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred -cccceEEEEecCcHHHHHHHHHhhcCceEE---e--ecCceEEeecccccHHHHHHHHHHHc
Confidence 112 44555544 7777777777887663 2 46677788733 7788888887765
No 396
>PLN02672 methionine S-methyltransferase
Probab=86.71 E-value=12 Score=40.24 Aligned_cols=195 Identities=9% Similarity=0.038 Sum_probs=116.5
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCcEEEcCChHHHHHHHHHhh------cCCCCCCCceEEEeCCCC
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRHIVIGTGSTQLYQAALYAL------SSPGGPEPISVVSAAPYY 97 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~i~~t~G~t~~l~~~~~~l------~~~gd~~~~~vl~~~p~~ 97 (360)
..|.++.|- ..+|..++.|++.+ +++.+++ +|++.++-..++..++..+ ++.+-+ -.+| +.
T Consensus 420 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~- 487 (1082)
T PLN02672 420 FPCEPPAGS-----KRFRNLIAGFMRIYHHIPLTPD-NVVVFPSRAVAIENALRLFSPRLAIVDEHLT----RWLP-KK- 487 (1082)
T ss_pred CCCCCCccc-----hHHHHHHHHHHHHhcCCcCCcc-ceEEeccHHHHHHHHHHhhChHHHhhhhhhh----ccCC-HH-
Confidence 347788887 99999999998754 7777775 8999999999997777654 333332 2222 11
Q ss_pred CCcHHHHHHhC--------Cee--eeecCCcc---ccccCCCeeEEEEcCCCCC-CcccchHHHHHHhhhcCcEEEEeec
Q 018172 98 SQYPAETDYLR--------SGL--YKWDGDAN---TFDKNNGAYIEVVNSPNNP-DGTIREAVLAKVNRSAEGKLIHDLA 163 (360)
Q Consensus 98 ~~~~~~~~~~g--------~~~--~~~~~~~~---~~~~~~~~~~i~~~~p~NP-tG~~~~~~~~~~~~~~~~~li~D~a 163 (360)
+...+..-| -.+ +.-|...+ .+...-+++.|+....... +-...-+.+...+++.|.+++.|..
T Consensus 488 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 488 --WLTSLAIENATSDSKSDDVITVIEAPRQSDLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred --HHhHhhhhcccccCccCCeEEEEeCCCcchHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehh
Confidence 222222222 111 11111111 1122456788876655421 1111114455556669999999986
Q ss_pred ccCCCCCcCC------------CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHH
Q 018172 164 YYWPQYTPIT------------GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAK 231 (360)
Q Consensus 164 y~~~~~~~~~------------~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 231 (360)
-.. .+.+++ ....+..++-++-|.-=.+.+.+.+++.-+..+...|.+.........+.+.|..-..
T Consensus 566 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (1082)
T PLN02672 566 DHL-ELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISENEAVLKALSKTGEVLEGRTAIISQFYYGC 644 (1082)
T ss_pred hhe-eeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCcHHHHHHHHHHHHhhccchHHHHHHHHHH
Confidence 432 111111 2344556667777755458999999998777888888877766666677777765554
Q ss_pred Hhc
Q 018172 232 ILG 234 (360)
Q Consensus 232 ~l~ 234 (360)
.+.
T Consensus 645 ~~~ 647 (1082)
T PLN02672 645 LFH 647 (1082)
T ss_pred HHH
Confidence 443
No 397
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=72.62 E-value=21 Score=30.39 Aligned_cols=93 Identities=13% Similarity=0.053 Sum_probs=46.9
Q ss_pred CcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCCccccccCCCeeEEEEcCCCCCC
Q 018172 60 RHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDANTFDKNNGAYIEVVNSPNNPD 139 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~p~NPt 139 (360)
..|++..|+..+...+ ..|++.|.. |.+-.|....-...+...| ++..+.-+...-+. .+..+|+ ..++++
T Consensus 10 k~vlVvGgG~va~rk~-~~Ll~~ga~----VtVvsp~~~~~l~~l~~~~-~i~~~~~~~~~~dl-~~~~lVi-~at~d~- 80 (205)
T TIGR01470 10 RAVLVVGGGDVALRKA-RLLLKAGAQ----LRVIAEELESELTLLAEQG-GITWLARCFDADIL-EGAFLVI-AATDDE- 80 (205)
T ss_pred CeEEEECcCHHHHHHH-HHHHHCCCE----EEEEcCCCCHHHHHHHHcC-CEEEEeCCCCHHHh-CCcEEEE-ECCCCH-
Confidence 3688888888886555 555556665 6666666553332222223 34333322111011 1234444 444432
Q ss_pred cccchHHHHHHhhhcCcEEE-Eeec
Q 018172 140 GTIREAVLAKVNRSAEGKLI-HDLA 163 (360)
Q Consensus 140 G~~~~~~~~~~~~~~~~~li-~D~a 163 (360)
-.+..+...|++.++++- .|+.
T Consensus 81 --~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 81 --ELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred --HHHHHHHHHHHHcCCEEEECCCc
Confidence 134556666776888773 5543
No 398
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=61.98 E-value=18 Score=31.88 Aligned_cols=88 Identities=16% Similarity=0.100 Sum_probs=54.9
Q ss_pred cEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeC-CCCCCcHHHHHHhCCeeeeecC-Ccccccc---CCCeeEEEEcCC
Q 018172 61 HIVIGTGSTQLYQAALYALSSPGGPEPISVVSAA-PYYSQYPAETDYLRSGLYKWDG-DANTFDK---NNGAYIEVVNSP 135 (360)
Q Consensus 61 ~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~-p~~~~~~~~~~~~g~~~~~~~~-~~~~~~~---~~~~~~i~~~~p 135 (360)
.|++-+|++++- .+...|.+.|.. ++++. -.|.. ....+.++..-.+ +.+++.. +.+.++|+ ..
T Consensus 4 ~IlvlgGT~egr-~la~~L~~~g~~----v~~Svat~~g~----~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VI--DA 72 (248)
T PRK08057 4 RILLLGGTSEAR-ALARALAAAGVD----IVLSLAGRTGG----PADLPGPVRVGGFGGAEGLAAYLREEGIDLVI--DA 72 (248)
T ss_pred eEEEEechHHHH-HHHHHHHhCCCe----EEEEEccCCCC----cccCCceEEECCCCCHHHHHHHHHHCCCCEEE--EC
Confidence 689999999995 555566555654 55553 33443 3334555555555 5444433 45555544 45
Q ss_pred CCCCcccchHHHHHHhhhcCcEEE
Q 018172 136 NNPDGTIREAVLAKVNRSAEGKLI 159 (360)
Q Consensus 136 ~NPtG~~~~~~~~~~~~~~~~~li 159 (360)
++|....+++-+.++|++.++..+
T Consensus 73 THPfA~~is~~a~~ac~~~~ipyi 96 (248)
T PRK08057 73 THPYAAQISANAAAACRALGIPYL 96 (248)
T ss_pred CCccHHHHHHHHHHHHHHhCCcEE
Confidence 567777788777777877777665
No 399
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=56.69 E-value=34 Score=31.75 Aligned_cols=121 Identities=19% Similarity=0.095 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCC------CcHHHHHHhCCeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYS------QYPAETDYLRSGLY 112 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~------~~~~~~~~~g~~~~ 112 (360)
.+|++.+.++-+..+. .-+-|+..||+-.+..++....-.-|.. +.++.-++.|. ....+++.+|.+..
T Consensus 43 ~~l~~l~~~~k~~~~~---~yD~iV~lSGGkDSs~la~ll~~~~gl~--~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~ 117 (343)
T TIGR03573 43 KELEELVDKIKKKGGG---RYDCIIGVSGGKDSTYQAHVLKKKLGLN--PLLVTVDPGWNTELGVKNLNNLIKKLGFDLH 117 (343)
T ss_pred HHHHHHHHHHHhcCCC---CCCEEEECCCCHHHHHHHHHHHHHhCCc--eEEEEECCCCCCHHHHHHHHHHHHHcCCCeE
Confidence 4555555554432111 1345666699988877653332222433 11245556665 34555666899888
Q ss_pred eecCCccccccCCCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecc
Q 018172 113 KWDGDANTFDKNNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAY 164 (360)
Q Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay 164 (360)
.+.++.+.+..-.+..+--..+|..++....-..+.++++++|+.+|+.--.
T Consensus 118 ~i~~d~~~~~~l~~~~~~~~~~pc~~c~~~~~~~l~~~A~~~gi~~Il~G~~ 169 (343)
T TIGR03573 118 TITINPETFRKLQRAYFKKVGDPEWPQDHAIFASVYQVALKFNIPLIIWGEN 169 (343)
T ss_pred EEeCCHHHHHHHHHHHHhccCCCchhhhhHHHHHHHHHHHHhCCCEEEeCCC
Confidence 8877755432210000111122332333333345566777799988866543
No 400
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=41.18 E-value=46 Score=29.45 Aligned_cols=92 Identities=10% Similarity=-0.001 Sum_probs=50.8
Q ss_pred cEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCCcccccc---CCCeeEEEEcCCCC
Q 018172 61 HIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDANTFDK---NNGAYIEVVNSPNN 137 (360)
Q Consensus 61 ~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~i~~~~p~N 137 (360)
.|++..|++++ ..+...|.+.|.. |+...-+=.........-+..+..-.++.+.+.. +.++++|+ ...+
T Consensus 2 ~ILvlGGT~eg-r~la~~L~~~g~~----v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VI--DAtH 74 (256)
T TIGR00715 2 TVLLMGGTVDS-RAIAKGLIAQGIE----ILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILV--DATH 74 (256)
T ss_pred eEEEEechHHH-HHHHHHHHhCCCe----EEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEE--EcCC
Confidence 58899999997 4555566666755 6555322222222222112333333344443322 34445444 4456
Q ss_pred CCcccchHHHHHHhhhcCcEEE
Q 018172 138 PDGTIREAVLAKVNRSAEGKLI 159 (360)
Q Consensus 138 PtG~~~~~~~~~~~~~~~~~li 159 (360)
|.-..+++-+..+|++.++..+
T Consensus 75 PfA~~is~~a~~a~~~~~ipyl 96 (256)
T TIGR00715 75 PFAAQITTNATAVCKELGIPYV 96 (256)
T ss_pred HHHHHHHHHHHHHHHHhCCcEE
Confidence 7777788777778887777666
No 401
>KOG0119 consensus Splicing factor 1/branch point binding protein (RRM superfamily) [RNA processing and modification]
Probab=38.77 E-value=3.8e+02 Score=26.11 Aligned_cols=107 Identities=13% Similarity=0.154 Sum_probs=54.0
Q ss_pred HHHHHHHH-HHHHHHHHHHHHhcCCcccCCCCCccc-----ccccccCCCCCCcccccCC-chHHHHHHHHhh--Ceeee
Q 018172 244 FEYGRRLM-SERWNMLRQVIRQSGVFGLPEYPLEYC-----NFTGKFTNSHPGFAWLESK-EDEDCEKLLRAE--RIMAR 314 (360)
Q Consensus 244 ~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~--gI~~~ 314 (360)
..+.++.+ .+|++++.+.|+..+++..+....-.. .|+...-..+-||+.+-+. .+....++=++. .|.|+
T Consensus 101 e~R~r~~Le~er~e~I~~~lk~nP~fkpP~DYk~p~~~~~Kv~IPvke~Pd~NFvGLiiGPRG~TqK~lE~etgAKI~IR 180 (554)
T KOG0119|consen 101 EQRARKKLEDERHEIIEEILKLNPGFKPPADYKPPAKLHDKVYIPVKEFPDINFVGLIIGPRGNTQKRLERETGAKIAIR 180 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcCCCCCcccCcccccccceecchhhcCCcceeEEEecCCccHHHHHHHHhCCeEEEe
Confidence 33344444 455556666667666665532211110 1222222345567666653 234444444444 56666
Q ss_pred C-CCC------------CCCCCCeEEEEecC-ChHHHHHHHHHHHHHHhc
Q 018172 315 G-GRR------------FGADAKYARVSMLS-REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 315 p-g~~------------f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~ 350 (360)
- |+. -.....-+-+=++. ++|.++.+++.++.++..
T Consensus 181 GkgSvkEgk~~~~d~~~~~~~~epLH~~Isadt~eki~~Ai~vienli~~ 230 (554)
T KOG0119|consen 181 GKGSVKEGKGRSDDLSYIPKENEPLHCLISADTQEKIKKAIAVIENLIQS 230 (554)
T ss_pred ccccccccccCCcccccccccccceeEEEecchHHHHHHHHHHHHHHHHh
Confidence 4 110 00011113333434 899999999999999975
No 402
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=38.13 E-value=56 Score=28.80 Aligned_cols=91 Identities=14% Similarity=0.078 Sum_probs=45.6
Q ss_pred cEEEcCChHHHHHHHHHhhcCCCCCCCceEEEe-CCCCCCcHHHHHHhCCeeeeecC-Ccccccc---CCCeeEEEEcCC
Q 018172 61 HIVIGTGSTQLYQAALYALSSPGGPEPISVVSA-APYYSQYPAETDYLRSGLYKWDG-DANTFDK---NNGAYIEVVNSP 135 (360)
Q Consensus 61 ~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~-~p~~~~~~~~~~~~g~~~~~~~~-~~~~~~~---~~~~~~i~~~~p 135 (360)
+|++-.|++++- .+...|.+.|. |+++ .-.|..-...-...+.++..=.+ +.+++.. +.+.++|+ ..
T Consensus 2 ~ILvlgGTtE~r-~la~~L~~~g~-----v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vI--DA 73 (249)
T PF02571_consen 2 KILVLGGTTEGR-KLAERLAEAGY-----VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVI--DA 73 (249)
T ss_pred EEEEEechHHHH-HHHHHHHhcCC-----EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEE--EC
Confidence 588999999994 56666665553 2222 12222111111112333333333 3333322 33334433 44
Q ss_pred CCCCcccchHHHHHHhhhcCcEEE
Q 018172 136 NNPDGTIREAVLAKVNRSAEGKLI 159 (360)
Q Consensus 136 ~NPtG~~~~~~~~~~~~~~~~~li 159 (360)
++|....+++-+.++|++.|+..+
T Consensus 74 THPfA~~is~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 74 THPFAAEISQNAIEACRELGIPYL 97 (249)
T ss_pred CCchHHHHHHHHHHHHhhcCcceE
Confidence 556666667666666766666655
No 403
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=37.69 E-value=2.5e+02 Score=24.00 Aligned_cols=89 Identities=15% Similarity=0.186 Sum_probs=50.6
Q ss_pred CcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCC-CCcHHHHHHhCCeeeeecCCcccccc--CCCeeEEEEcCCC
Q 018172 60 RHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYY-SQYPAETDYLRSGLYKWDGDANTFDK--NNGAYIEVVNSPN 136 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~i~~~~p~ 136 (360)
..|++..|+..+... +..|++.|.. |.+-.|.. +......+..+.+ .+. +.++. ..+..+++..+.+
T Consensus 13 k~VlvvGgG~va~rK-a~~ll~~ga~----v~Vvs~~~~~el~~~~~~~~i~--~~~---~~~~~~~~~~~~lviaAt~d 82 (210)
T COG1648 13 KKVLVVGGGSVALRK-ARLLLKAGAD----VTVVSPEFEPELKALIEEGKIK--WIE---REFDAEDLDDAFLVIAATDD 82 (210)
T ss_pred CEEEEECCCHHHHHH-HHHHHhcCCE----EEEEcCCccHHHHHHHHhcCcc--hhh---cccChhhhcCceEEEEeCCC
Confidence 368888888988765 4556666777 77777777 2233333333322 111 23332 1225666665554
Q ss_pred CCCcccchHHHHHHhhhcCcEEE-Eee
Q 018172 137 NPDGTIREAVLAKVNRSAEGKLI-HDL 162 (360)
Q Consensus 137 NPtG~~~~~~~~~~~~~~~~~li-~D~ 162 (360)
- .+++.+.+.|+++++++= +|+
T Consensus 83 ~----~ln~~i~~~a~~~~i~vNv~D~ 105 (210)
T COG1648 83 E----ELNERIAKAARERRILVNVVDD 105 (210)
T ss_pred H----HHHHHHHHHHHHhCCceeccCC
Confidence 1 134677788887777654 444
No 404
>PF05687 DUF822: Plant protein of unknown function (DUF822); InterPro: IPR008540 This group of proteins contains members of the BZR1/LAT61 family of plant transcriptional repressors involved in controlling the response to Brassinosteroids (BRs). BRs are plant hormones that play essential roles in growth and development. BZR1 binds directly to DNA repressing the synthesis of genes involved in BR synthesis. Phosphorylation of BZR1 by BIN1 targets BZR1 to the 20S proteosome, while dephosphorylation leads to nuclear accumulation of BZR1 [].
Probab=37.53 E-value=2e+02 Score=22.84 Aligned_cols=51 Identities=16% Similarity=0.119 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHHH---HHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeC
Q 018172 242 NFFEYGRRLMSERW---NMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARG 315 (360)
Q Consensus 242 ~~~~~~~~~~~~~~---~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~p 315 (360)
++-|+.+++-++|| .++...|+.++++. ....-|. +.+..+.++.|..|.|
T Consensus 10 kErEnnk~RERrRRAIaakIfaGLR~~Gny~-----------------------Lp~~aD~NeVLkALc~eAGw~Ve~ 64 (150)
T PF05687_consen 10 KERENNKRRERRRRAIAAKIFAGLRAHGNYK-----------------------LPKHADNNEVLKALCREAGWTVEP 64 (150)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----------------------CCCcCCHHHHHHHHHHhCCEEEcc
Confidence 44455555666666 45666777776433 2222233 6667788888999887
No 405
>PF13113 DUF3970: Protein of unknown function (DUF3970)
Probab=37.38 E-value=42 Score=22.07 Aligned_cols=21 Identities=14% Similarity=0.355 Sum_probs=16.9
Q ss_pred EEEecCChHHHHHHHHHHHHH
Q 018172 327 RVSMLSREEIFNIFLERLSAI 347 (360)
Q Consensus 327 R~s~~~~~e~~~~~~~~l~~~ 347 (360)
|+-++.++|+|+++++.+.++
T Consensus 3 qVRl~G~~eEi~~fi~~~~~~ 23 (60)
T PF13113_consen 3 QVRLSGTKEEIEEFIKSFEKL 23 (60)
T ss_pred eEEecCCHHHHHHHHHhhhhc
Confidence 555557888999999999884
No 406
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=34.72 E-value=1e+02 Score=20.59 Aligned_cols=46 Identities=11% Similarity=0.074 Sum_probs=34.5
Q ss_pred HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 300 EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 300 ~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
..+...|.+.||-+.-- .. ...-.++|+..++++.++++++|.+.+
T Consensus 19 ~ki~~~L~~~~I~v~~i-~~--~~s~~~is~~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 19 ARGLAALAEAGIEPIAA-HQ--SMRNVDVQFVVDRDDYDNAIKALHAAL 64 (66)
T ss_pred HHHHHHHHHCCCCEEEE-Ee--cCCeeEEEEEEEHHHHHHHHHHHHHHH
Confidence 67788888999987421 11 233578998779999999999998764
No 407
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=32.19 E-value=1.8e+02 Score=21.62 Aligned_cols=64 Identities=11% Similarity=0.077 Sum_probs=37.5
Q ss_pred EEEeCCCCCCcHHHHHHhCCeeeeecCCccccccCCCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEe
Q 018172 90 VVSAAPYYSQYPAETDYLRSGLYKWDGDANTFDKNNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHD 161 (360)
Q Consensus 90 vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D 161 (360)
+-+-++.-.......+..|.+ .-.+.+.+..+++..++++++|+. .-.+.+..+.+ +|..++++
T Consensus 29 ~~v~d~~~~~~~~~~~~~~~~---~~~~~~~ll~~~~~D~V~I~tp~~----~h~~~~~~~l~-~g~~v~~E 92 (120)
T PF01408_consen 29 VAVCDPDPERAEAFAEKYGIP---VYTDLEELLADEDVDAVIIATPPS----SHAEIAKKALE-AGKHVLVE 92 (120)
T ss_dssp EEEECSSHHHHHHHHHHTTSE---EESSHHHHHHHTTESEEEEESSGG----GHHHHHHHHHH-TTSEEEEE
T ss_pred EEEEeCCHHHHHHHHHHhccc---chhHHHHHHHhhcCCEEEEecCCc----chHHHHHHHHH-cCCEEEEE
Confidence 335556555555566667777 223455555566788999888863 11234444444 66666655
No 408
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=31.09 E-value=2.3e+02 Score=25.70 Aligned_cols=105 Identities=11% Similarity=0.017 Sum_probs=58.4
Q ss_pred CCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeC--CCCCCcH--HHHHHhCCeeeeecCCccccccCCCeeEEEEc
Q 018172 58 DGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAA--PYYSQYP--AETDYLRSGLYKWDGDANTFDKNNGAYIEVVN 133 (360)
Q Consensus 58 ~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~--p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~ 133 (360)
.+.++++|.|-+.+...++....+.|.+ .+|++.+ |.+.... ..++..|.++..+.-..-++-.+. ...+++.
T Consensus 118 ~dg~~IlTh~~S~~v~~~l~~A~~~~k~--~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~Dsa~~~~~~~-vd~VivG 194 (301)
T COG1184 118 HDGDVILTHSFSKTVLEVLKTAADRGKR--FKVIVTESRPRGEGRIMAKELRQSGIPVTVIVDSAVGAFMSR-VDKVLVG 194 (301)
T ss_pred cCCCEEEEecCcHHHHHHHHHhhhcCCc--eEEEEEcCCCcchHHHHHHHHHHcCCceEEEechHHHHHHHh-CCEEEEC
Confidence 3458999999999988888888877753 2366654 7777554 335556888776642211111111 1222221
Q ss_pred -CCCCCCcccchH----HHHHHhhhcCcEEE-Eeeccc
Q 018172 134 -SPNNPDGTIREA----VLAKVNRSAEGKLI-HDLAYY 165 (360)
Q Consensus 134 -~p~NPtG~~~~~----~~~~~~~~~~~~li-~D~ay~ 165 (360)
..---.|..+++ .+..+|++.+.+++ +=+.|=
T Consensus 195 ad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~aesyK 232 (301)
T COG1184 195 ADAILANGALVNKIGTSPLALAARELRVPFYVVAESYK 232 (301)
T ss_pred ccceecCCcEEeccchHHHHHHHHHhCCCEEEEeeeec
Confidence 111123444443 35556776676554 555554
No 409
>cd04891 ACT_AK-LysC-DapG-like_1 ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII and related proteins. This CD includes the N-terminal of the two ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, as well as, the first and third, of four, ACT domains present in cyanobacteria AK. Also included are the N-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase isoenzyme AKI found in Bacilli (Bacillus subtilis strain 168), Clostridia, and Actinobacteria bacterial species. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=30.97 E-value=1.3e+02 Score=18.80 Aligned_cols=45 Identities=11% Similarity=-0.087 Sum_probs=29.9
Q ss_pred HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHH
Q 018172 300 EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERL 344 (360)
Q Consensus 300 ~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l 344 (360)
..+...|.+.||.+.--......++...+++..++++.+++++.+
T Consensus 16 ~~i~~~L~~~~i~i~~i~~~~~~~~~~~is~~v~~~~~~~~~~~l 60 (61)
T cd04891 16 AKIFSALAEAGINVDMIVQSVSRGGTTDISFTVPKSDLEKALAIL 60 (61)
T ss_pred HHHHHHHHHcCCcEEEEEEcCCCCCcEEEEEEEeHHHHHHHHHHh
Confidence 678888889988875321111112337788877888888887765
No 410
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=30.85 E-value=1.7e+02 Score=19.61 Aligned_cols=59 Identities=7% Similarity=0.057 Sum_probs=30.9
Q ss_pred cHHHHHHhCCeeeeecCCccccccCCCeeEEEEcCCC-CCCc-ccchHHHHHHhhhcCcEEEEe
Q 018172 100 YPAETDYLRSGLYKWDGDANTFDKNNGAYIEVVNSPN-NPDG-TIREAVLAKVNRSAEGKLIHD 161 (360)
Q Consensus 100 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~p~-NPtG-~~~~~~~~~~~~~~~~~li~D 161 (360)
....++..|.++..+.-..+.+.. .+ ..+++.+|. +.+- ... +.+.++.++-|-++|.|
T Consensus 10 ~~~~L~~~g~~v~~~~~~~~~l~~-~~-~tll~i~~~~~~~~~~~~-~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 10 LYQLLEEQGVKVERWRKPYEALEA-DD-GTLLVIGPDLRLSEPEEA-EALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHHHCCCeeEEecccHHHhCC-CC-CEEEEEeCCCCCCchHHH-HHHHHHHHcCCEEEEeC
Confidence 455666678888877655555543 22 334444444 3332 111 34445555466666654
No 411
>cd04913 ACT_AKii-LysC-BS-like_1 ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related proteins. This CD includes the N-terminal of the two ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive aspartokinase isoenzymes. The B. subtilis 168 AKII is induced by methionine and repressed and inhibited by lysine. Although Corynebacterium glutamicum is known to contain a single aspartokinase, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In corynebacteria and other various Gram-positive bacteria, the DAP-lysine pathway is fee
Probab=30.25 E-value=1.6e+02 Score=19.31 Aligned_cols=49 Identities=10% Similarity=-0.057 Sum_probs=33.4
Q ss_pred HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 300 EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 300 ~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
..+...|.+.||-+.--.......+..+++|..++++.+++++.+.+..
T Consensus 17 ~~i~~~L~~~~I~i~~i~~~~~~~~~~~is~~v~~~d~~~~~~~l~~~~ 65 (75)
T cd04913 17 AKIFGALAEANINVDMIVQNVSRDGTTDISFTVPKSDLKKALAVLEKLK 65 (75)
T ss_pred HHHHHHHHHcCCeEEEEEeCCCCCCcEEEEEEecHHHHHHHHHHHHHHH
Confidence 6688888999998743221111122467888778889999988888755
No 412
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=30.08 E-value=1.7e+02 Score=28.38 Aligned_cols=107 Identities=12% Similarity=0.025 Sum_probs=68.0
Q ss_pred CCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH--HHHHhCCeeeeecCCccccccCCCeeEEEEcCCC
Q 018172 59 GRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA--ETDYLRSGLYKWDGDANTFDKNNGAYIEVVNSPN 136 (360)
Q Consensus 59 ~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~p~ 136 (360)
+..+++|-|.+..++.++....+.|..=.+.|+-+.|.+..-.. -+...|+++..+-+..-++..-+-+++++=.+.-
T Consensus 359 dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~lr~Lv~~GinctYv~I~a~syim~evtkvfLGahai 438 (556)
T KOG1467|consen 359 DGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKLLRRLVDRGINCTYVLINAASYIMLEVTKVFLGAHAI 438 (556)
T ss_pred cCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHHHHHHHHcCCCeEEEEehhHHHHHHhcceeeechhhh
Confidence 34799999999999998877655454322335556688776643 3445688888776554333333445665444443
Q ss_pred CCCcccchH----HHHHHhhhcCcEEE-Eeeccc
Q 018172 137 NPDGTIREA----VLAKVNRSAEGKLI-HDLAYY 165 (360)
Q Consensus 137 NPtG~~~~~----~~~~~~~~~~~~li-~D~ay~ 165 (360)
---|.+|++ .+..++..+++.+| +=|+|-
T Consensus 439 lsNG~vysR~GTa~valvAna~nVPVlVCCE~yK 472 (556)
T KOG1467|consen 439 LSNGAVYSRVGTACVALVANAFNVPVLVCCEAYK 472 (556)
T ss_pred hcCcchhhhcchHHHHHHhcccCCCEEEEechhh
Confidence 345888883 45566777888766 555654
No 413
>cd04922 ACT_AKi-HSDH-ThrA_2 ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). This CD includes the second of two ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). The ACT domains are positioned between the N-terminal catalytic domain of AK and the C-terminal HSDH domain found in bacteria (Escherichia coli (EC) ThrA) and higher plants (Zea mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. HSDH is the first committed reaction in the branch of the pathway that leads to Thr and Met. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathwa
Probab=29.56 E-value=1.3e+02 Score=19.54 Aligned_cols=46 Identities=13% Similarity=0.009 Sum_probs=33.2
Q ss_pred HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 300 EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 300 ~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
..+.+.|.+.||.+.--. .+. .-.++++..++++.++++++|.+.+
T Consensus 19 ~~i~~~l~~~~I~v~~i~-~~~--s~~~is~~v~~~~~~~~~~~lh~~~ 64 (66)
T cd04922 19 ATFFSALAKANVNIRAIA-QGS--SERNISAVIDEDDATKALRAVHERF 64 (66)
T ss_pred HHHHHHHHHCCCCEEEEE-ecC--cccEEEEEEeHHHHHHHHHHHHHHH
Confidence 778888999998874211 121 2268888778888999999988764
No 414
>cd04918 ACT_AK1-AT_2 ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1). This CD includes the second of two ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1), which can be synergistically inhibited by S-adenosylmethionine (SAM). This isoenzyme is found in higher plants, Arabidopsis thaliana (AT) and Zea mays, and also in Chlorophyta. In its inactive state, Arabidopsis AK1 binds the effectors lysine and SAM (two molecules each) at the interface of two ACT1 domain subunits. The second ACT domain (ACT2), this CD, does not interact with an effector. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=29.16 E-value=1.3e+02 Score=19.88 Aligned_cols=46 Identities=13% Similarity=0.075 Sum_probs=33.7
Q ss_pred HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 300 EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 300 ~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
..+...|.+.||-+.-- ..+ ..-..+|+..++++.++++++|.+.+
T Consensus 18 ~~i~~aL~~~~I~v~~i-~~g--~s~~sis~~v~~~~~~~av~~Lh~~f 63 (65)
T cd04918 18 ERAFHVLYTKGVNVQMI-SQG--ASKVNISLIVNDSEAEGCVQALHKSF 63 (65)
T ss_pred HHHHHHHHHCCCCEEEE-Eec--CccceEEEEEeHHHHHHHHHHHHHHH
Confidence 67788889999887421 122 23467888779999999999998765
No 415
>cd04937 ACT_AKi-DapG-BS_2 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive AK isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The BS AKI is tetrameric consisting of two alpha and two beta subunits; th
Probab=28.67 E-value=1.5e+02 Score=19.45 Aligned_cols=44 Identities=16% Similarity=0.030 Sum_probs=34.3
Q ss_pred HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 300 EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 300 ~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
..+...|.+.||.+.-.. ..-..+|+..++++.++++++|.+.+
T Consensus 19 ~~if~aL~~~~I~v~~~~-----~Se~~is~~v~~~~~~~av~~Lh~~f 62 (64)
T cd04937 19 AKIVGALSKEGIEILQTA-----DSHTTISCLVSEDDVKEAVNALHEAF 62 (64)
T ss_pred HHHHHHHHHCCCCEEEEE-----cCccEEEEEEcHHHHHHHHHHHHHHh
Confidence 778888999999886322 23467888779999999999998765
No 416
>COG4098 comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair]
Probab=28.09 E-value=3.2e+02 Score=25.48 Aligned_cols=64 Identities=16% Similarity=0.199 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEE---EcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIV---IGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLY 112 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~---~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~ 112 (360)
+...+++.+.+.. .++.++ .++|-||-++..+...++.|+. |.+..|--.........+...+.
T Consensus 103 ~~as~~l~q~i~~------k~~~lv~AV~GaGKTEMif~~i~~al~~G~~----vciASPRvDVclEl~~Rlk~aF~ 169 (441)
T COG4098 103 KKASNQLVQYIKQ------KEDTLVWAVTGAGKTEMIFQGIEQALNQGGR----VCIASPRVDVCLELYPRLKQAFS 169 (441)
T ss_pred HHHHHHHHHHHHh------cCcEEEEEecCCCchhhhHHHHHHHHhcCCe----EEEecCcccchHHHHHHHHHhhc
Confidence 6666777777664 444343 4689999999999999999998 99999988877777666544433
No 417
>PRK14420 acylphosphatase; Provisional
Probab=27.76 E-value=1.1e+02 Score=21.97 Aligned_cols=45 Identities=13% Similarity=0.132 Sum_probs=32.6
Q ss_pred HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHH
Q 018172 300 EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAI 347 (360)
Q Consensus 300 ~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~ 347 (360)
..+..+..+.||. |...+..++.+.+-+..++++++.+++.|++-
T Consensus 19 ~~~~~~A~~~gl~---G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~~ 63 (91)
T PRK14420 19 YFVQMEADKRKLT---GWVKNRDDGTVEIEAEGPEEALQLFLDAIEKG 63 (91)
T ss_pred HHHHHHHHHcCCE---EEEEECCCCcEEEEEEECHHHHHHHHHHHHhC
Confidence 5566777777764 33334456679999877999999999999864
No 418
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=27.75 E-value=1.5e+02 Score=19.47 Aligned_cols=44 Identities=9% Similarity=0.040 Sum_probs=32.5
Q ss_pred HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 300 EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 300 ~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
....+.|.+.+|.+.. .+ ..-+++|+..++++.++++++|.+.+
T Consensus 18 ~~~~~~L~~~~i~~i~---~~--~s~~~is~vv~~~d~~~av~~LH~~f 61 (63)
T cd04920 18 GPALEVFGKKPVHLVS---QA--ANDLNLTFVVDEDQADGLCARLHFQL 61 (63)
T ss_pred HHHHHHHhcCCceEEE---Ee--CCCCeEEEEEeHHHHHHHHHHHHHHH
Confidence 6667777777777643 22 34568988779999999999998754
No 419
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=27.75 E-value=2.1e+02 Score=27.46 Aligned_cols=93 Identities=14% Similarity=0.072 Sum_probs=49.7
Q ss_pred CcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCC-CCcHHH---HHHhCCeeeeecCCccccccCCCeeEEEEcCC
Q 018172 60 RHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYY-SQYPAE---TDYLRSGLYKWDGDANTFDKNNGAYIEVVNSP 135 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~-~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~p 135 (360)
..++++.++..++ .+...|.+.|.. |.+.++.. ...... +...|.++..-....+ . ..+..+|+.+
T Consensus 6 k~v~iiG~g~~G~-~~A~~l~~~G~~----V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~--~~~~d~vv~~-- 75 (450)
T PRK14106 6 KKVLVVGAGVSGL-ALAKFLKKLGAK----VILTDEKEEDQLKEALEELGELGIELVLGEYPEE-F--LEGVDLVVVS-- 75 (450)
T ss_pred CEEEEECCCHHHH-HHHHHHHHCCCE----EEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchh-H--hhcCCEEEEC--
Confidence 3577777767776 677777778877 77777654 222222 2233555433222211 1 1224555532
Q ss_pred CCCCcccchHHHHHHhhhcCcEEEEeeccc
Q 018172 136 NNPDGTIREAVLAKVNRSAEGKLIHDLAYY 165 (360)
Q Consensus 136 ~NPtG~~~~~~~~~~~~~~~~~li~D~ay~ 165 (360)
+|......+...|+++|+.++.+-+..
T Consensus 76 ---~g~~~~~~~~~~a~~~~i~~~~~~~~~ 102 (450)
T PRK14106 76 ---PGVPLDSPPVVQAHKKGIEVIGEVELA 102 (450)
T ss_pred ---CCCCCCCHHHHHHHHCCCcEEeHHHHH
Confidence 344444234444555899998776543
No 420
>cd04924 ACT_AK-Arch_2 ACT domains of a monofunctional aspartokinase found mostly in Archaea species (ACT_AK-Arch_2). Included in this CD is the second of two ACT domains of a monofunctional aspartokinase found mostly in Archaea species (ACT_AK-Arch_2). The first or N-terminal ACT domain of these proteins cluster with the ThrA-like ACT 1 domains (ACT_AKi-HSDH-ThrA-like_1) which includes the threonine-sensitive archaeal Methanococcus jannaschii aspartokinase ACT 1 domain. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=25.97 E-value=1.6e+02 Score=18.94 Aligned_cols=46 Identities=11% Similarity=-0.125 Sum_probs=33.0
Q ss_pred HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 300 EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 300 ~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
..+...|.+.||.+.--. .+. ...+++|..+.++.++++++|.+.+
T Consensus 19 ~~i~~~L~~~~I~v~~i~-q~~--s~~~isf~i~~~~~~~~~~~Lh~~~ 64 (66)
T cd04924 19 GRVFGALGKAGINVIMIS-QGS--SEYNISFVVAEDDGWAAVKAVHDEF 64 (66)
T ss_pred HHHHHHHHHCCCCEEEEE-ecC--ccceEEEEEeHHHHHHHHHHHHHHh
Confidence 678888889988764211 111 1267888778899999999988765
No 421
>PF12575 DUF3753: Protein of unknown function (DUF3753); InterPro: IPR009175 This group represents an uncharacterised conserved protein belonging to poxvirus family I2.
Probab=25.49 E-value=1.1e+02 Score=21.08 Aligned_cols=24 Identities=21% Similarity=0.336 Sum_probs=20.4
Q ss_pred ecCChHHHHHHHHHHHHHHhchhc
Q 018172 330 MLSREEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 330 ~~~~~e~~~~~~~~l~~~~~~~~~ 353 (360)
++.++||++.+++..+.++.+.++
T Consensus 13 mss~ddDf~~Fi~vVksVltdk~~ 36 (72)
T PF12575_consen 13 MSSSDDDFNNFINVVKSVLTDKKK 36 (72)
T ss_pred cCCCHHHHHHHHHHHHHHHcCCcc
Confidence 356899999999999999987654
No 422
>PHA02650 hypothetical protein; Provisional
Probab=24.89 E-value=1.1e+02 Score=21.41 Aligned_cols=23 Identities=22% Similarity=0.374 Sum_probs=20.0
Q ss_pred ecCChHHHHHHHHHHHHHHhchh
Q 018172 330 MLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 330 ~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
++++++|++.+++..+.++....
T Consensus 13 msS~DdDFnnFI~VVkSVLtD~~ 35 (81)
T PHA02650 13 MSSTDDDFNNFIDVVKSVLSDED 35 (81)
T ss_pred cCCcHHHHHHHHHHHHHHHcCCC
Confidence 45689999999999999998763
No 423
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=24.06 E-value=2.1e+02 Score=25.21 Aligned_cols=113 Identities=12% Similarity=0.055 Sum_probs=63.5
Q ss_pred CcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCCcccccc---CCCeeEEEEcCCC
Q 018172 60 RHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDANTFDK---NNGAYIEVVNSPN 136 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~i~~~~p~ 136 (360)
..|++-.|++++..++-..-..+++. ++.+.-.|..- .+...+..++.=..+.+++.. +.++++++ ..+
T Consensus 3 ~~ilvlGGT~Dar~la~~L~~~~~~~----~~ss~t~~g~~--l~~~~~~~~~~G~l~~e~l~~~l~e~~i~llI--DAT 74 (257)
T COG2099 3 MRILLLGGTSDARALAKKLAAAPVDI----ILSSLTGYGAK--LAEQIGPVRVGGFLGAEGLAAFLREEGIDLLI--DAT 74 (257)
T ss_pred ceEEEEeccHHHHHHHHHhhccCccE----EEEEccccccc--chhccCCeeecCcCCHHHHHHHHHHcCCCEEE--ECC
Confidence 36899999999965554444444454 66665555432 222233333333455554433 44555554 345
Q ss_pred CCCcccchHHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccc
Q 018172 137 NPDGTIREAVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLS 186 (360)
Q Consensus 137 NPtG~~~~~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~s 186 (360)
+|-....|+-..++|++.|+..+-=+- ++.....++.+.+.|+.
T Consensus 75 HPyAa~iS~Na~~aake~gipy~r~eR------P~~~~~gd~~~~V~d~~ 118 (257)
T COG2099 75 HPYAARISQNAARAAKETGIPYLRLER------PPWAPNGDNWIEVADIE 118 (257)
T ss_pred ChHHHHHHHHHHHHHHHhCCcEEEEEC------CccccCCCceEEecCHH
Confidence 677777777777778878887664332 22222255666666554
No 424
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=23.37 E-value=5.7e+02 Score=23.31 Aligned_cols=126 Identities=13% Similarity=0.088 Sum_probs=63.8
Q ss_pred CcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeC--CCCCCcHHHHHH--hCCeeeeecCCcccccc-CCCeeEEEEcC
Q 018172 60 RHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAA--PYYSQYPAETDY--LRSGLYKWDGDANTFDK-NNGAYIEVVNS 134 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~--p~~~~~~~~~~~--~g~~~~~~~~~~~~~~~-~~~~~~i~~~~ 134 (360)
++|++|.|.+......+....+.|.+ -+|++.+ |.+.+..-+..+ .|++..-++ |..-|.. ..--|.|+-+.
T Consensus 163 nEviLT~g~SrTV~~FL~~A~kk~Rk--f~viVaE~~p~~qgH~~Ak~la~~giettVI~-daaVfA~MsrVnKVIigt~ 239 (353)
T KOG1465|consen 163 NEVILTLGSSRTVENFLKHAAKKGRK--FRVIVAEGAPNNQGHELAKPLAQAGIETTVIP-DAAVFAMMSRVNKVIIGTH 239 (353)
T ss_pred CceEEecCccHHHHHHHHHHHhccCc--eEEEEeecCCcccchHhhHHHHHcCCeeEEec-cHHHHHHhhhcceEEEEee
Confidence 47999999999998888888776643 2366654 555543222222 366655543 2111111 11113443333
Q ss_pred CCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC-CcCCCCCCccEEEeccccccC
Q 018172 135 PNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY-TPITGAADHDIMLFTLSKCTG 190 (360)
Q Consensus 135 p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~-~~~~~~~~~~i~~~S~sK~~~ 190 (360)
.--+-|-... --+..++++|.+.+++=.-.. .+ +..+...+...-++|-++.+.
T Consensus 240 avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp~y--KLsPlyp~~~ds~~~f~s~~~il~ 298 (353)
T KOG1465|consen 240 AVLANGGLRAPSGVHTVALAAKHHSVPVIVLAPMY--KLSPLYPTNPDSFHEFRSPSEILP 298 (353)
T ss_pred eEecCCCeeccchHHHHHHHHHhcCCcEEEecchh--hcCCCCCCCHHHHHhcCCcccccC
Confidence 3223333322 234555776777776544322 11 222333444445666666554
No 425
>PHA02975 hypothetical protein; Provisional
Probab=23.16 E-value=1.2e+02 Score=20.64 Aligned_cols=23 Identities=17% Similarity=0.343 Sum_probs=19.9
Q ss_pred ecCChHHHHHHHHHHHHHHhchh
Q 018172 330 MLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 330 ~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
++++++|++++++..+.++....
T Consensus 13 msS~DdDF~nFI~vVksVLtdk~ 35 (69)
T PHA02975 13 LESNDSDFEDFIDTIMHVLTGKK 35 (69)
T ss_pred cCCChHHHHHHHHHHHHHHcCCC
Confidence 45689999999999999998763
No 426
>PRK14438 acylphosphatase; Provisional
Probab=22.54 E-value=1.7e+02 Score=21.11 Aligned_cols=44 Identities=5% Similarity=-0.027 Sum_probs=32.5
Q ss_pred HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHH
Q 018172 300 EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSA 346 (360)
Q Consensus 300 ~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~ 346 (360)
.++.++..+.||. |..-+..++.+.+-+..++++++++++.|.+
T Consensus 20 ~~~~~~A~~~gl~---G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~ 63 (91)
T PRK14438 20 HHTQQTAQRLNVS---GWVKNLPNGSVQGCFEGEETDVAALIDWCHH 63 (91)
T ss_pred HHHHHHHHHcCCE---EEEEECCCCEEEEEEEECHHHHHHHHHHHhh
Confidence 6677777777874 3334445677888887799999999998864
No 427
>PRK14429 acylphosphatase; Provisional
Probab=21.87 E-value=1.9e+02 Score=20.81 Aligned_cols=44 Identities=7% Similarity=0.022 Sum_probs=32.2
Q ss_pred HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHH
Q 018172 300 EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSA 346 (360)
Q Consensus 300 ~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~ 346 (360)
..+.++..+.|+. |..-+..++.+.+-+..++++++.+++.|++
T Consensus 19 ~~v~~~A~~~gl~---G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~ 62 (90)
T PRK14429 19 RATLTKARALGVT---GYVTNCEDGSVEILAQGSDPAVDNLIAWCEV 62 (90)
T ss_pred HHHHHHHHHhCCE---EEEEECCCCeEEEEEEeCHHHHHHHHHHHhh
Confidence 5667777777764 3333445667888887799999999999875
No 428
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=21.85 E-value=4.9e+02 Score=21.93 Aligned_cols=35 Identities=20% Similarity=0.250 Sum_probs=22.6
Q ss_pred CcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCC
Q 018172 60 RHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQ 99 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~ 99 (360)
..|++..|+.-+. ..+..|.+.|.. |.+-+|.+..
T Consensus 11 k~vLVIGgG~va~-~ka~~Ll~~ga~----V~VIs~~~~~ 45 (202)
T PRK06718 11 KRVVIVGGGKVAG-RRAITLLKYGAH----IVVISPELTE 45 (202)
T ss_pred CEEEEECCCHHHH-HHHHHHHHCCCe----EEEEcCCCCH
Confidence 3677777777774 445566666655 6666777643
No 429
>TIGR03739 PRTRC_D PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.
Probab=20.60 E-value=2.4e+02 Score=25.74 Aligned_cols=43 Identities=19% Similarity=0.156 Sum_probs=30.4
Q ss_pred CCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHH
Q 018172 59 GRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETD 105 (360)
Q Consensus 59 ~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~ 105 (360)
-+.|+++.|+...+...+...+....- +++++|.|.+......
T Consensus 274 ~~~Iil~GGGa~ll~~~l~~~f~~~~i----~~~~dp~~ANarG~~~ 316 (320)
T TIGR03739 274 IQNIVLVGGGAFLFKKAVKAAFPKHRI----VEVDEPMFANVRGFQI 316 (320)
T ss_pred ccEEEEeCCcHHHHHHHHHHHCCCCee----EecCCcHHHHHHHHHH
Confidence 457999999999988877776643321 3678888877655443
Done!