Query 018172
Match_columns 360
No_of_seqs 114 out of 1653
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 11:04:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018172.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018172hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bwn_A AT1G70560, L-tryptophan 100.0 1E-45 3.5E-50 348.0 23.6 322 23-352 55-388 (391)
2 1b5p_A Protein (aspartate amin 100.0 3.7E-41 1.3E-45 316.2 30.3 299 25-350 62-384 (385)
3 2r2n_A Kynurenine/alpha-aminoa 100.0 4.7E-40 1.6E-44 312.7 28.5 302 25-350 72-423 (425)
4 3aow_A Putative uncharacterize 100.0 1.3E-39 4.3E-44 311.7 29.4 299 25-351 112-445 (448)
5 2hox_A ALLIIN lyase 1; cystein 100.0 3.4E-40 1.2E-44 313.6 23.5 310 26-352 91-426 (427)
6 3jtx_A Aminotransferase; NP_28 100.0 1.1E-38 3.9E-43 300.0 33.0 296 23-348 58-395 (396)
7 2z61_A Probable aspartate amin 100.0 5.7E-39 1.9E-43 299.6 30.4 297 25-349 60-369 (370)
8 3ihj_A Alanine aminotransferas 100.0 5.6E-39 1.9E-43 310.8 29.5 310 24-353 122-495 (498)
9 3dyd_A Tyrosine aminotransfera 100.0 9.9E-39 3.4E-43 303.8 29.7 300 25-352 90-425 (427)
10 3ezs_A Aminotransferase ASPB; 100.0 1.8E-38 6E-43 296.7 29.9 295 23-351 51-375 (376)
11 3h14_A Aminotransferase, class 100.0 8.4E-39 2.9E-43 300.6 27.9 299 25-352 62-383 (391)
12 3ppl_A Aspartate aminotransfer 100.0 9.1E-39 3.1E-43 304.0 28.0 299 23-352 70-421 (427)
13 2o1b_A Aminotransferase, class 100.0 1.8E-38 6.2E-43 299.9 29.8 298 25-350 79-402 (404)
14 3fvs_A Kynurenine--oxoglutarat 100.0 1.3E-38 4.4E-43 302.2 28.3 303 24-350 60-421 (422)
15 1fg7_A Histidinol phosphate am 100.0 1.9E-38 6.4E-43 294.8 28.4 284 25-347 53-354 (356)
16 2x5d_A Probable aminotransfera 100.0 3E-38 1E-42 299.0 30.2 300 25-352 69-399 (412)
17 3d6k_A Putative aminotransfera 100.0 1.1E-38 3.8E-43 303.0 26.5 300 24-352 69-419 (422)
18 3tcm_A Alanine aminotransferas 100.0 2.2E-38 7.4E-43 307.1 29.0 305 24-352 127-495 (500)
19 1gd9_A Aspartate aminotransfer 100.0 1E-37 3.4E-42 293.0 32.0 300 25-351 57-386 (389)
20 2dou_A Probable N-succinyldiam 100.0 1.6E-38 5.4E-43 297.2 25.9 294 25-348 57-375 (376)
21 3qgu_A LL-diaminopimelate amin 100.0 1.7E-38 5.9E-43 304.0 26.6 297 25-351 105-440 (449)
22 3k7y_A Aspartate aminotransfer 100.0 1.1E-38 3.6E-43 300.6 24.5 293 24-350 65-404 (405)
23 3b46_A Aminotransferase BNA3; 100.0 9.9E-39 3.4E-43 305.6 24.2 298 24-347 88-443 (447)
24 3nra_A Aspartate aminotransfer 100.0 4.1E-38 1.4E-42 297.2 28.1 300 26-352 73-406 (407)
25 3ele_A Amino transferase; RER0 100.0 1.2E-37 4.1E-42 293.4 29.8 294 24-352 69-397 (398)
26 3op7_A Aminotransferase class 100.0 2E-38 6.9E-43 296.3 24.3 296 25-353 57-373 (375)
27 3e2y_A Kynurenine-oxoglutarate 100.0 7.7E-38 2.6E-42 295.7 28.2 300 24-347 54-409 (410)
28 3g7q_A Valine-pyruvate aminotr 100.0 1E-37 3.5E-42 295.5 28.6 305 26-353 70-415 (417)
29 1j32_A Aspartate aminotransfer 100.0 3.6E-37 1.2E-41 289.1 32.0 297 25-350 61-386 (388)
30 1o4s_A Aspartate aminotransfer 100.0 2.7E-37 9.1E-42 290.4 30.7 292 26-350 73-388 (389)
31 1vp4_A Aminotransferase, putat 100.0 6.7E-38 2.3E-42 297.9 25.8 303 25-354 79-421 (425)
32 3ei9_A LL-diaminopimelate amin 100.0 1E-37 3.5E-42 297.1 26.6 294 25-348 92-425 (432)
33 3ez1_A Aminotransferase MOCR f 100.0 1.7E-37 6E-42 294.7 27.9 300 23-352 61-416 (423)
34 1u08_A Hypothetical aminotrans 100.0 3.1E-37 1.1E-41 289.4 29.3 294 25-346 61-385 (386)
35 3fdb_A Beta C-S lyase, putativ 100.0 7.9E-38 2.7E-42 292.3 25.0 290 39-351 61-376 (377)
36 1v2d_A Glutamine aminotransfer 100.0 1.6E-37 5.5E-42 290.9 27.2 296 25-353 55-373 (381)
37 1yiz_A Kynurenine aminotransfe 100.0 4.2E-37 1.4E-41 292.6 30.3 303 24-350 70-428 (429)
38 1bw0_A TAT, protein (tyrosine 100.0 3.1E-37 1.1E-41 292.3 28.9 301 25-353 69-415 (416)
39 2gb3_A Aspartate aminotransfer 100.0 1.2E-36 4.1E-41 287.8 31.8 300 25-353 73-404 (409)
40 2o0r_A RV0858C (N-succinyldiam 100.0 2.9E-37 1E-41 292.1 27.5 301 24-352 55-397 (411)
41 3p1t_A Putative histidinol-pho 100.0 6.7E-37 2.3E-41 281.7 28.2 283 24-350 45-336 (337)
42 3g0t_A Putative aminotransfera 100.0 3.4E-37 1.2E-41 293.7 26.3 301 25-350 76-436 (437)
43 3get_A Histidinol-phosphate am 100.0 7.8E-37 2.7E-41 284.5 27.8 282 25-348 60-364 (365)
44 2zyj_A Alpha-aminodipate amino 100.0 7.4E-37 2.5E-41 288.0 27.3 294 25-351 68-393 (397)
45 3hdo_A Histidinol-phosphate am 100.0 2E-36 7E-41 281.3 29.9 279 39-352 68-356 (360)
46 1c7n_A Cystalysin; transferase 100.0 1.4E-36 4.7E-41 286.2 29.0 292 39-352 69-394 (399)
47 3ffh_A Histidinol-phosphate am 100.0 2.3E-36 7.7E-41 281.2 30.1 277 38-348 69-363 (363)
48 1xi9_A Putative transaminase; 100.0 5.3E-37 1.8E-41 289.9 26.2 297 26-351 73-403 (406)
49 3piu_A 1-aminocyclopropane-1-c 100.0 7E-37 2.4E-41 291.7 27.2 301 25-352 80-433 (435)
50 1iay_A ACC synthase 2, 1-amino 100.0 1.7E-36 5.8E-41 288.4 29.7 301 24-351 76-427 (428)
51 1lc5_A COBD, L-threonine-O-3-p 100.0 2.8E-36 9.4E-41 280.8 29.0 286 25-351 54-360 (364)
52 3kax_A Aminotransferase, class 100.0 2.8E-36 9.6E-41 282.2 28.6 288 39-348 62-382 (383)
53 3f6t_A Aspartate aminotransfer 100.0 1.9E-37 6.6E-42 302.3 21.1 304 26-353 132-527 (533)
54 2x5f_A Aspartate_tyrosine_phen 100.0 1.5E-36 5.1E-41 288.9 26.7 297 24-351 81-429 (430)
55 3dzz_A Putative pyridoxal 5'-p 100.0 3.9E-36 1.3E-40 282.0 28.9 292 39-352 65-390 (391)
56 3fkd_A L-threonine-O-3-phospha 100.0 2.1E-36 7.2E-41 280.1 26.2 288 24-353 44-344 (350)
57 1d2f_A MALY protein; aminotran 100.0 6.1E-36 2.1E-40 281.0 29.2 290 39-351 66-389 (390)
58 2zc0_A Alanine glyoxylate tran 100.0 3.2E-36 1.1E-40 284.4 27.3 298 27-351 71-404 (407)
59 3rq1_A Aminotransferase class 100.0 3.7E-36 1.3E-40 285.1 27.5 297 25-351 74-415 (418)
60 3ly1_A Putative histidinol-pho 100.0 5.1E-36 1.7E-40 277.7 27.4 277 38-350 53-351 (354)
61 7aat_A Aspartate aminotransfer 100.0 3E-36 1E-40 284.2 26.0 292 24-348 64-400 (401)
62 3euc_A Histidinol-phosphate am 100.0 1.1E-35 3.8E-40 276.9 28.7 279 38-349 69-366 (367)
63 3asa_A LL-diaminopimelate amin 100.0 2.6E-36 9E-41 284.6 24.1 293 25-351 69-393 (400)
64 4dq6_A Putative pyridoxal phos 100.0 2.9E-35 9.8E-40 276.2 30.3 287 39-348 70-390 (391)
65 2zy4_A L-aspartate beta-decarb 100.0 1.8E-36 6.3E-41 295.6 22.6 299 25-351 132-522 (546)
66 3if2_A Aminotransferase; YP_26 100.0 7.5E-36 2.6E-40 285.2 25.1 301 25-352 77-441 (444)
67 4f4e_A Aromatic-amino-acid ami 100.0 3.8E-36 1.3E-40 285.4 22.3 292 25-348 86-419 (420)
68 3t18_A Aminotransferase class 100.0 1.5E-35 5.1E-40 280.5 25.7 294 25-351 73-410 (413)
69 3ftb_A Histidinol-phosphate am 100.0 8.3E-35 2.8E-39 270.2 27.9 274 39-349 64-359 (361)
70 3fsl_A Aromatic-amino-acid ami 100.0 1.9E-35 6.4E-40 278.2 22.4 292 25-348 64-397 (397)
71 3meb_A Aspartate aminotransfer 100.0 4.5E-35 1.5E-39 280.2 25.1 295 24-350 87-443 (448)
72 3l8a_A METC, putative aminotra 100.0 3.8E-35 1.3E-39 278.6 24.1 289 39-349 99-420 (421)
73 1uu1_A Histidinol-phosphate am 100.0 2.3E-34 8E-39 264.8 26.8 275 25-347 51-334 (335)
74 4eu1_A Mitochondrial aspartate 100.0 2E-34 6.9E-39 272.5 25.1 292 24-348 72-408 (409)
75 3cq5_A Histidinol-phosphate am 100.0 7.8E-34 2.7E-38 264.8 26.5 279 39-350 72-367 (369)
76 1ajs_A Aspartate aminotransfer 100.0 3.1E-34 1.1E-38 271.3 23.8 294 24-350 67-410 (412)
77 2q7w_A Aspartate aminotransfer 100.0 1.8E-34 6.1E-39 271.4 20.6 291 25-348 63-396 (396)
78 1yaa_A Aspartate aminotransfer 100.0 4.2E-34 1.4E-38 270.5 22.4 292 25-349 67-409 (412)
79 4h51_A Aspartate aminotransfer 100.0 6.9E-34 2.4E-38 268.0 23.6 296 26-352 82-418 (420)
80 2ay1_A Aroat, aromatic amino a 100.0 2.1E-33 7.3E-38 263.9 22.1 289 24-347 62-392 (394)
81 3b1d_A Betac-S lyase; HET: PLP 100.0 1.8E-36 6.2E-41 284.9 0.0 289 39-349 69-391 (392)
82 1vjo_A Alanine--glyoxylate ami 100.0 3.9E-32 1.3E-36 255.2 24.5 284 39-349 70-393 (393)
83 3a2b_A Serine palmitoyltransfe 100.0 7.8E-32 2.7E-36 253.7 25.8 287 27-351 80-392 (398)
84 2dr1_A PH1308 protein, 386AA l 100.0 2.3E-31 7.7E-36 249.0 28.3 287 39-351 56-379 (386)
85 1eg5_A Aminotransferase; PLP-d 100.0 1.7E-32 5.9E-37 256.3 19.3 286 39-352 47-377 (384)
86 1iug_A Putative aspartate amin 100.0 2.9E-31 1E-35 245.2 25.7 281 39-351 37-348 (352)
87 1e5e_A MGL, methionine gamma-l 100.0 9.6E-31 3.3E-35 246.8 27.3 285 40-350 66-394 (404)
88 1t3i_A Probable cysteine desul 100.0 3.8E-31 1.3E-35 250.3 22.4 291 39-353 75-415 (420)
89 3zrp_A Serine-pyruvate aminotr 100.0 1.3E-30 4.6E-35 243.5 25.6 286 39-352 38-364 (384)
90 1kmj_A Selenocysteine lyase; p 100.0 2.1E-31 7.1E-36 250.8 20.1 286 38-350 69-404 (406)
91 2z9v_A Aspartate aminotransfer 100.0 1.8E-30 6.1E-35 243.6 26.0 285 39-351 45-371 (392)
92 2ch1_A 3-hydroxykynurenine tra 100.0 8.6E-31 2.9E-35 246.1 23.8 289 38-352 53-384 (396)
93 1elu_A L-cysteine/L-cystine C- 100.0 4.2E-31 1.4E-35 247.6 20.0 280 39-347 62-388 (390)
94 2huf_A Alanine glyoxylate amin 100.0 2E-30 6.8E-35 243.4 24.5 289 38-354 54-386 (393)
95 3tqx_A 2-amino-3-ketobutyrate 100.0 1.2E-30 4E-35 245.4 22.9 279 39-351 91-396 (399)
96 1bs0_A Protein (8-amino-7-oxon 100.0 4.1E-30 1.4E-34 240.7 24.3 275 39-347 87-383 (384)
97 1fc4_A 2-amino-3-ketobutyrate 100.0 2.4E-30 8.2E-35 243.7 22.7 278 38-351 92-397 (401)
98 4eb5_A Probable cysteine desul 100.0 8.7E-31 3E-35 244.7 18.8 288 39-353 46-375 (382)
99 3cai_A Possible aminotransfera 100.0 3.3E-30 1.1E-34 243.0 22.8 285 38-347 71-405 (406)
100 4hvk_A Probable cysteine desul 100.0 1E-30 3.4E-35 243.9 18.2 285 39-353 46-375 (382)
101 3kgw_A Alanine-glyoxylate amin 100.0 8E-30 2.7E-34 238.9 23.9 290 39-353 59-390 (393)
102 1m32_A 2-aminoethylphosphonate 100.0 1.7E-29 5.9E-34 234.3 24.8 284 39-350 40-364 (366)
103 2yrr_A Aminotransferase, class 100.0 4E-30 1.4E-34 237.4 19.8 283 39-350 36-352 (353)
104 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 3.1E-31 1.1E-35 246.9 12.5 278 39-350 56-369 (371)
105 3nnk_A Ureidoglycine-glyoxylat 100.0 2.8E-29 9.7E-34 236.8 25.4 287 39-352 49-391 (411)
106 3lvm_A Cysteine desulfurase; s 100.0 4E-30 1.4E-34 243.7 19.5 285 39-352 71-400 (423)
107 3isl_A Purine catabolism prote 100.0 5.8E-29 2E-33 235.1 27.3 285 39-351 47-390 (416)
108 2bwn_A 5-aminolevulinate synth 100.0 2.3E-29 7.7E-34 237.1 24.1 278 39-350 94-399 (401)
109 3f9t_A TDC, L-tyrosine decarbo 100.0 9.3E-30 3.2E-34 238.6 21.1 275 39-349 72-396 (397)
110 3ffr_A Phosphoserine aminotran 100.0 3.3E-29 1.1E-33 232.2 23.7 282 39-348 46-361 (362)
111 2w8t_A SPT, serine palmitoyltr 100.0 2.2E-29 7.5E-34 239.3 21.8 281 38-352 111-416 (427)
112 3vax_A Putative uncharacterize 100.0 4.3E-30 1.5E-34 241.7 14.4 283 39-350 66-399 (400)
113 2bkw_A Alanine-glyoxylate amin 100.0 1.5E-28 5.1E-33 229.8 23.7 291 39-350 41-383 (385)
114 2rfv_A Methionine gamma-lyase; 100.0 1.2E-28 4.3E-33 232.0 22.3 288 38-347 66-396 (398)
115 1ibj_A CBL, cystathionine beta 100.0 1.9E-28 6.4E-33 234.5 23.1 287 39-350 136-461 (464)
116 1pff_A Methionine gamma-lyase; 100.0 1.4E-28 4.8E-33 225.7 21.3 285 40-347 2-330 (331)
117 2aeu_A Hypothetical protein MJ 100.0 1.2E-28 4.2E-33 230.1 19.6 266 60-351 77-371 (374)
118 1qz9_A Kynureninase; kynurenin 100.0 2.1E-28 7.2E-33 231.4 20.6 284 39-351 74-402 (416)
119 1cs1_A CGS, protein (cystathio 100.0 1.1E-27 3.9E-32 224.5 24.7 288 38-347 54-383 (386)
120 2c0r_A PSAT, phosphoserine ami 100.0 6.5E-29 2.2E-33 230.8 16.0 278 39-351 52-361 (362)
121 3kki_A CAI-1 autoinducer synth 100.0 6.7E-28 2.3E-32 227.7 22.0 275 39-350 107-403 (409)
122 3f0h_A Aminotransferase; RER07 100.0 1.5E-27 5E-32 222.5 22.7 286 39-350 55-373 (376)
123 1w23_A Phosphoserine aminotran 100.0 2E-28 6.7E-33 227.1 16.0 279 39-350 51-359 (360)
124 3cog_A Cystathionine gamma-lya 100.0 1.3E-27 4.5E-32 225.2 21.2 289 38-349 69-400 (403)
125 2eh6_A Acoat, acetylornithine 100.0 6.2E-28 2.1E-32 225.1 18.7 267 39-348 73-375 (375)
126 3qhx_A Cystathionine gamma-syn 100.0 8.6E-27 3E-31 218.9 25.4 287 38-347 68-390 (392)
127 3lws_A Aromatic amino acid bet 100.0 1.1E-27 3.8E-32 222.0 18.9 280 25-348 41-356 (357)
128 1jg8_A L-ALLO-threonine aldola 100.0 2.8E-27 9.7E-32 218.3 20.1 277 26-350 33-345 (347)
129 3ndn_A O-succinylhomoserine su 100.0 4.5E-27 1.6E-31 222.0 21.3 286 38-348 83-413 (414)
130 2cb1_A O-acetyl homoserine sul 100.0 2.5E-26 8.6E-31 217.2 26.3 288 38-346 58-411 (412)
131 1qgn_A Protein (cystathionine 100.0 1.3E-26 4.3E-31 220.3 24.1 287 39-349 117-443 (445)
132 3acz_A Methionine gamma-lyase; 100.0 1.1E-26 3.9E-31 217.9 23.5 288 38-349 61-387 (389)
133 1gc0_A Methionine gamma-lyase; 100.0 1.1E-26 3.9E-31 218.6 23.5 287 38-347 67-397 (398)
134 2oga_A Transaminase; PLP-depen 100.0 3.6E-26 1.2E-30 215.2 26.7 285 26-352 58-397 (399)
135 1v72_A Aldolase; PLP-dependent 100.0 6.5E-27 2.2E-31 216.3 20.9 276 39-351 46-353 (356)
136 1b9h_A AHBA synthase, protein 100.0 1.1E-26 3.9E-31 217.7 22.8 291 27-350 34-387 (388)
137 2fyf_A PSAT, phosphoserine ami 99.9 1.1E-26 3.9E-31 218.5 22.3 281 39-350 81-397 (398)
138 1sff_A 4-aminobutyrate aminotr 99.9 1.6E-27 5.5E-32 226.1 16.4 277 39-351 87-424 (426)
139 3ruy_A Ornithine aminotransfer 99.9 2.7E-27 9.1E-32 222.2 17.7 275 38-349 80-392 (392)
140 1n8p_A Cystathionine gamma-lya 99.9 7.7E-27 2.6E-31 219.3 20.4 289 38-348 57-392 (393)
141 3a9z_A Selenocysteine lyase; P 99.9 1.9E-27 6.4E-32 226.2 15.5 286 39-353 64-430 (432)
142 2dkj_A Serine hydroxymethyltra 99.9 2.2E-26 7.7E-31 216.8 22.4 275 44-350 77-387 (407)
143 4adb_A Succinylornithine trans 99.9 1.4E-26 4.9E-31 218.1 20.8 278 38-353 83-402 (406)
144 3i4j_A Aminotransferase, class 99.9 1.3E-26 4.3E-31 220.4 20.1 284 39-350 75-427 (430)
145 3uwc_A Nucleotide-sugar aminot 99.9 2.2E-25 7.4E-30 207.8 26.3 289 26-352 33-372 (374)
146 1vef_A Acetylornithine/acetyl- 99.9 8.2E-27 2.8E-31 219.1 16.3 274 38-348 89-394 (395)
147 1mdo_A ARNB aminotransferase; 99.9 2.1E-25 7.3E-30 209.2 25.7 281 39-351 42-386 (393)
148 3e9k_A Kynureninase; kynurenin 99.9 1.5E-26 5.3E-31 222.1 17.0 287 39-351 114-461 (465)
149 2ord_A Acoat, acetylornithine 99.9 3E-26 1E-30 215.5 18.5 273 38-349 84-395 (397)
150 3nx3_A Acoat, acetylornithine 99.9 6.4E-26 2.2E-30 213.1 20.1 277 39-350 81-394 (395)
151 2fq6_A Cystathionine beta-lyas 99.9 4.6E-25 1.6E-29 208.2 25.9 286 38-346 84-413 (415)
152 2po3_A 4-dehydrase; external a 99.9 3.5E-25 1.2E-29 210.1 25.1 286 26-350 46-385 (424)
153 1svv_A Threonine aldolase; str 99.9 1.1E-25 3.7E-30 208.2 19.4 284 27-350 41-357 (359)
154 2fnu_A Aminotransferase; prote 99.9 6.9E-25 2.4E-29 204.2 24.3 281 38-351 34-372 (375)
155 3mad_A Sphingosine-1-phosphate 99.9 2.2E-25 7.6E-30 216.7 21.6 284 39-352 138-470 (514)
156 3pj0_A LMO0305 protein; struct 99.9 1.3E-25 4.5E-30 208.0 18.9 284 26-348 43-359 (359)
157 2vi8_A Serine hydroxymethyltra 99.9 3.2E-25 1.1E-29 208.7 21.8 278 41-352 74-388 (405)
158 1zod_A DGD, 2,2-dialkylglycine 99.9 9.1E-26 3.1E-30 214.7 17.9 279 39-350 88-431 (433)
159 1s0a_A Adenosylmethionine-8-am 99.9 1.6E-25 5.4E-30 212.8 19.2 279 39-352 89-425 (429)
160 3dr4_A Putative perosamine syn 99.9 9.4E-25 3.2E-29 204.8 24.2 284 26-348 50-390 (391)
161 3frk_A QDTB; aminotransferase, 99.9 6.9E-25 2.4E-29 204.4 23.0 286 27-351 32-368 (373)
162 3nyt_A Aminotransferase WBPE; 99.9 2.8E-24 9.5E-29 200.0 26.6 282 26-347 30-360 (367)
163 2ez2_A Beta-tyrosinase, tyrosi 99.9 1.5E-24 5.3E-29 207.5 25.5 284 26-352 70-432 (456)
164 2eo5_A 419AA long hypothetical 99.9 2.3E-25 7.9E-30 211.0 18.6 267 39-350 89-417 (419)
165 2pb2_A Acetylornithine/succiny 99.9 5.7E-25 1.9E-29 208.4 21.1 270 39-350 102-417 (420)
166 3mc6_A Sphingosine-1-phosphate 99.9 5.8E-25 2E-29 212.8 19.8 284 39-352 106-438 (497)
167 1wyu_B Glycine dehydrogenase s 99.9 4.8E-25 1.6E-29 212.1 19.0 271 61-350 125-440 (474)
168 3n5m_A Adenosylmethionine-8-am 99.9 4.9E-25 1.7E-29 210.8 18.5 282 39-350 94-451 (452)
169 3n0l_A Serine hydroxymethyltra 99.9 5.8E-24 2E-28 200.9 24.6 278 41-351 76-389 (417)
170 3dxv_A Alpha-amino-epsilon-cap 99.9 2.9E-25 1E-29 211.5 15.7 267 60-352 105-426 (439)
171 3l44_A Glutamate-1-semialdehyd 99.9 4.3E-25 1.5E-29 210.1 16.8 281 39-353 98-432 (434)
172 3gju_A Putative aminotransfera 99.9 1.4E-24 4.9E-29 208.1 20.4 268 59-352 112-457 (460)
173 4ffc_A 4-aminobutyrate aminotr 99.9 6.5E-25 2.2E-29 210.0 17.2 283 39-351 110-449 (453)
174 2c81_A Glutamine-2-deoxy-scyll 99.9 3.4E-23 1.2E-27 196.0 28.7 290 27-351 34-414 (418)
175 3oks_A 4-aminobutyrate transam 99.9 3.8E-24 1.3E-28 204.6 19.6 266 60-350 123-450 (451)
176 1rv3_A Serine hydroxymethyltra 99.9 5.3E-24 1.8E-28 205.2 20.7 281 39-350 89-430 (483)
177 3ri6_A O-acetylhomoserine sulf 99.9 1.2E-23 4.3E-28 199.1 22.6 287 38-348 84-429 (430)
178 4a6r_A Omega transaminase; tra 99.9 1.3E-24 4.4E-29 208.4 16.0 267 59-352 111-450 (459)
179 2dgk_A GAD-beta, GADB, glutama 99.9 6.3E-24 2.1E-28 203.2 20.1 273 61-352 105-435 (452)
180 3ecd_A Serine hydroxymethyltra 99.9 7.3E-23 2.5E-27 193.7 26.9 277 43-351 85-397 (425)
181 1o69_A Aminotransferase; struc 99.9 4.3E-23 1.5E-27 193.9 25.0 285 27-350 26-386 (394)
182 1ax4_A Tryptophanase; tryptoph 99.9 3.4E-24 1.2E-28 205.7 17.8 289 26-351 71-441 (467)
183 3gbx_A Serine hydroxymethyltra 99.9 1.5E-23 5.1E-28 198.2 21.2 275 43-351 83-396 (420)
184 2x3l_A ORN/Lys/Arg decarboxyla 99.9 3.3E-24 1.1E-28 204.5 16.5 271 38-351 59-353 (446)
185 1z7d_A Ornithine aminotransfer 99.9 8.4E-24 2.9E-28 201.2 18.8 276 38-351 109-429 (433)
186 2oat_A Ornithine aminotransfer 99.9 1.1E-23 3.7E-28 200.7 19.3 274 38-350 120-438 (439)
187 3nmy_A Xometc, cystathionine g 99.9 3.8E-23 1.3E-27 194.3 22.3 287 38-349 69-397 (400)
188 3k28_A Glutamate-1-semialdehyd 99.9 7.9E-24 2.7E-28 201.1 16.7 286 39-351 96-427 (429)
189 3tfu_A Adenosylmethionine-8-am 99.9 1.8E-23 6.1E-28 200.1 18.5 280 39-352 121-454 (457)
190 3dod_A Adenosylmethionine-8-am 99.9 4.8E-24 1.6E-28 203.7 14.5 263 60-351 105-443 (448)
191 3ke3_A Putative serine-pyruvat 99.9 1.6E-23 5.4E-28 195.8 17.7 285 39-352 38-377 (379)
192 3h7f_A Serine hydroxymethyltra 99.9 5.8E-22 2E-26 189.3 27.4 277 43-351 98-414 (447)
193 2z67_A O-phosphoseryl-tRNA(SEC 99.9 3.2E-23 1.1E-27 198.4 18.7 277 39-348 136-455 (456)
194 3a8u_X Omega-amino acid--pyruv 99.9 1.8E-23 6.3E-28 199.7 16.9 275 39-350 96-446 (449)
195 3ju7_A Putative PLP-dependent 99.9 5.1E-22 1.7E-26 185.4 24.4 279 39-350 39-374 (377)
196 3hbx_A GAD 1, glutamate decarb 99.9 1.1E-22 3.8E-27 196.8 20.0 270 64-352 122-445 (502)
197 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 7.6E-22 2.6E-26 187.9 25.4 281 39-350 65-435 (437)
198 4e77_A Glutamate-1-semialdehyd 99.9 9E-23 3.1E-27 193.8 18.6 291 39-350 96-428 (429)
199 2ctz_A O-acetyl-L-homoserine s 99.9 6.4E-23 2.2E-27 194.3 17.4 287 38-348 60-420 (421)
200 3fq8_A Glutamate-1-semialdehyd 99.9 7.5E-23 2.6E-27 194.2 17.9 277 39-350 95-426 (427)
201 1wyu_A Glycine dehydrogenase ( 99.9 1.5E-22 5.2E-27 192.8 19.4 279 39-348 111-437 (438)
202 3hmu_A Aminotransferase, class 99.9 5.2E-23 1.8E-27 197.6 15.2 275 39-351 102-452 (472)
203 2okj_A Glutamate decarboxylase 99.9 5.7E-22 1.9E-26 192.2 21.5 298 39-350 131-501 (504)
204 2cy8_A D-phgat, D-phenylglycin 99.9 2.3E-22 7.7E-27 192.4 15.3 278 39-354 96-438 (453)
205 3i5t_A Aminotransferase; pyrid 99.9 5.2E-22 1.8E-26 190.9 17.8 268 60-352 115-455 (476)
206 2oqx_A Tryptophanase; lyase, p 99.9 1.4E-22 4.7E-27 194.5 13.2 285 26-352 69-443 (467)
207 1js3_A DDC;, DOPA decarboxylas 99.9 1.6E-21 5.5E-26 188.1 19.9 294 39-354 112-477 (486)
208 2epj_A Glutamate-1-semialdehyd 99.9 3E-22 1E-26 190.4 14.2 274 39-351 99-431 (434)
209 2cjg_A L-lysine-epsilon aminot 99.9 2.8E-22 9.6E-27 191.5 13.4 270 39-350 104-447 (449)
210 2e7u_A Glutamate-1-semialdehyd 99.9 7.2E-22 2.5E-26 187.3 14.1 257 59-348 108-424 (424)
211 2qma_A Diaminobutyrate-pyruvat 99.9 3.1E-21 1.1E-25 186.6 18.8 285 39-350 139-495 (497)
212 3jzl_A Putative cystathionine 99.9 4E-20 1.4E-24 173.7 25.6 210 38-267 61-303 (409)
213 3i16_A Aluminum resistance pro 99.9 1.1E-20 3.9E-25 178.1 21.0 211 37-267 74-320 (427)
214 3b8x_A WBDK, pyridoxamine 5-ph 99.9 4.8E-20 1.7E-24 172.7 25.1 277 27-344 30-389 (390)
215 1c4k_A Protein (ornithine deca 99.9 3.5E-20 1.2E-24 185.1 24.7 292 38-351 175-566 (730)
216 3hvy_A Cystathionine beta-lyas 99.9 1.8E-20 6.1E-25 176.8 20.9 211 36-267 74-320 (427)
217 2jis_A Cysteine sulfinic acid 99.9 1.5E-20 5.1E-25 182.6 20.4 294 40-350 152-514 (515)
218 3m5u_A Phosphoserine aminotran 99.9 3.1E-20 1.1E-24 171.4 21.3 278 38-351 52-360 (361)
219 3vp6_A Glutamate decarboxylase 99.8 6E-20 2E-24 178.0 21.9 300 26-351 126-505 (511)
220 2a7v_A Serine hydroxymethyltra 99.8 1.5E-19 5E-24 173.2 22.8 280 39-350 99-440 (490)
221 3e77_A Phosphoserine aminotran 99.8 3.5E-20 1.2E-24 171.7 17.0 281 38-351 60-375 (377)
222 2vyc_A Biodegradative arginine 99.8 5.3E-19 1.8E-23 178.0 23.7 291 38-351 207-605 (755)
223 2yky_A Beta-transaminase; tran 99.7 4.9E-22 1.7E-26 189.3 0.0 276 39-352 143-461 (465)
224 4e1o_A HDC, histidine decarbox 99.8 5.8E-19 2E-23 169.9 19.4 287 39-351 117-478 (481)
225 3qm2_A Phosphoserine aminotran 99.8 3.7E-19 1.3E-23 165.7 17.2 277 38-351 74-385 (386)
226 3k40_A Aromatic-L-amino-acid d 99.8 5.7E-19 2E-23 169.6 17.1 291 39-351 112-471 (475)
227 3n75_A LDC, lysine decarboxyla 99.8 2E-18 6.8E-23 171.2 18.9 289 38-350 197-559 (715)
228 3ht4_A Aluminum resistance pro 99.8 2.2E-18 7.5E-23 163.1 18.3 209 38-267 67-309 (431)
229 1ohv_A 4-aminobutyrate aminotr 99.8 1.4E-18 4.9E-23 166.7 15.3 274 39-350 109-470 (472)
230 4ao9_A Beta-phenylalanine amin 99.6 3.9E-15 1.3E-19 140.9 14.7 279 59-355 143-450 (454)
231 4atq_A 4-aminobutyrate transam 99.5 5.7E-13 2E-17 126.5 16.6 269 59-350 125-454 (456)
232 3hl2_A O-phosphoseryl-tRNA(SEC 99.5 1.6E-12 5.5E-17 120.7 18.9 293 39-354 115-464 (501)
233 4e3q_A Pyruvate transaminase; 99.4 1.3E-11 4.5E-16 117.6 22.1 262 60-351 129-468 (473)
234 4a0g_A Adenosylmethionine-8-am 99.4 1.6E-12 5.5E-17 131.9 11.0 200 126-351 594-828 (831)
235 3bc8_A O-phosphoseryl-tRNA(SEC 99.3 1.3E-10 4.3E-15 109.1 21.1 291 40-353 98-445 (450)
236 3ou5_A Serine hydroxymethyltra 99.3 2.8E-10 9.4E-15 105.4 22.0 258 66-349 127-439 (490)
237 3dfz_A SIRC, precorrin-2 dehyd 46.4 86 0.0029 25.8 8.1 90 60-162 32-123 (223)
238 2gjh_A Designed protein; oblig 26.9 91 0.0031 18.7 3.6 26 325-350 3-29 (62)
239 1pjq_A CYSG, siroheme synthase 23.0 1.1E+02 0.0038 28.2 5.5 92 60-163 13-106 (457)
240 1pls_A Pleckstrin homology dom 20.7 1.3E+02 0.0044 21.0 4.5 28 332-359 84-111 (113)
No 1
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=1e-45 Score=348.01 Aligned_cols=322 Identities=60% Similarity=1.029 Sum_probs=263.8
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCC----CCCceEEEeCCCCC
Q 018172 23 LMSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGG----PEPISVVSAAPYYS 98 (360)
Q Consensus 23 ~~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd----~~~~~vl~~~p~~~ 98 (360)
....|++..|.|+...++||++++++++.+|..+.++++|++|+|+++++++++..++++|| + |++++|+|.
T Consensus 55 ~~~~Y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~----Vlv~~P~y~ 130 (391)
T 3bwn_A 55 LMSYFSDMTNLCWFLEPELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVS----VVAAAPFYS 130 (391)
T ss_dssp TCSSCSCTTSSSTTSCHHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEE----EEECSSCCT
T ss_pred hhhcCCCCCCcccccCHHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcce----EEEcCCCch
Confidence 44568888773111118999999999998898888767999999999999999999999999 7 999999999
Q ss_pred CcHHHHHHhCCeeeeecCCccccccCCCeeEEEEcCCCCCCcccchHHHHHHhhhcC--cEEEEeecccCCCCCcCCCCC
Q 018172 99 QYPAETDYLRSGLYKWDGDANTFDKNNGAYIEVVNSPNNPDGTIREAVLAKVNRSAE--GKLIHDLAYYWPQYTPITGAA 176 (360)
Q Consensus 99 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~--~~li~D~ay~~~~~~~~~~~~ 176 (360)
.+...++..|++++.+++|.+++. .+++++|++++||||||.++++++. ++++ +++|+|++|.++...++....
T Consensus 131 ~~~~~~~~~g~~~~~~~~d~~~l~-~~~~k~v~l~~p~NPtG~~~~~l~~---~~~~~~~~ii~De~y~~~~~~~l~~~~ 206 (391)
T 3bwn_A 131 TYVEETTYVRSGMYKWEGDAWGFD-KKGPYIELVTSPNNPDGTIRETVVN---RPDDDEAKVIHDFAYYWPHYTPITRRQ 206 (391)
T ss_dssp HHHHHHHTTCBTTEEEEEESTTCC-CCSCEEEEEESSCTTTCCCCCCCC--------CCCEEEEECTTCSTTTSCCCCCB
T ss_pred hHHHHHHHcCCeEEEecCCHHHcC-CCCCEEEEECCCCCCCchhHHHHHH---HhhcCCCEEEEeCCCCCCCCCccccCC
Confidence 999999999999999998888877 3578999999999999999984322 2255 999999999965444454456
Q ss_pred CccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCC------CchhHHHHHHHH
Q 018172 177 DHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSD------DYPNFFEYGRRL 250 (360)
Q Consensus 177 ~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~~~~ 250 (360)
+++++++||||+||++|+|+||++++++++++.+...+.....+.+.+.|.++.++++.... .++.+++++++.
T Consensus 207 ~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 286 (391)
T 3bwn_A 207 DHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREM 286 (391)
T ss_dssp CCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHH
T ss_pred CCeEEEEechhhcCCCccceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHH
Confidence 88999999999999999999999865789999999888766788999999999998874210 013789999999
Q ss_pred HHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEe
Q 018172 251 MSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYARVSM 330 (360)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~ 330 (360)
++++++.+.+.|++++++.+..|.++.+.|.....+..++|+|+++++.+.+.++|+++||.++||+.|+..++++|||+
T Consensus 287 ~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~ 366 (391)
T 3bwn_A 287 MKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSELRRHKVMSRAGERCGSDKKHVRVSM 366 (391)
T ss_dssp HHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESSSCCHHHHHHHTTEECEEGGGGTCCTTEEEEES
T ss_pred HHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCcHHHHHHHHHHCCEEEccCCCCCCCCCEEEEEe
Confidence 99999999999999877777667776655544444566778999997556788889999999999999986578999999
Q ss_pred cCChHHHHHHHHHHHHHHhchh
Q 018172 331 LSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 331 ~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
+.++|++++++++|++++++.+
T Consensus 367 ~~~~e~i~~~~~~L~~~~~~~~ 388 (391)
T 3bwn_A 367 LSREDVFNVFLERLANMKLIKS 388 (391)
T ss_dssp CSCHHHHHHHHHHHHSCC----
T ss_pred cCCHHHHHHHHHHHHHHHHhhc
Confidence 8889999999999999886643
No 2
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=3.7e-41 Score=316.21 Aligned_cols=299 Identities=21% Similarity=0.284 Sum_probs=243.9
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. +++|++++++++. +|..+++ ++|++|+|+++++++++..++++||+ |+++.|+|..+...
T Consensus 62 ~~y~~~~g~-----~~lr~~ia~~~~~~~g~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~----Vlv~~p~y~~~~~~ 131 (385)
T 1b5p_A 62 TKYAPPAGI-----PELREALAEKFRRENGLSVTP-EETIVTVGGSQALFNLFQAILDPGDE----VIVLSPYWVSYPEM 131 (385)
T ss_dssp CSCCCTTCC-----HHHHHHHHHHHHHTTCCCCCG-GGEEEESHHHHHHHHHHHHHCCTTCE----EEEEESCCTHHHHH
T ss_pred CCCCCCCCC-----HHHHHHHHHHHHHHhCCCCCh-HHEEEcCChHHHHHHHHHHhcCCCCE----EEEcCCCchhHHHH
Confidence 458777777 9999999999875 4666665 48999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCc-ccccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC
Q 018172 104 TDYLRSGLYKWDGDA-NTFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY 169 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~-~~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~ 169 (360)
++..|++++.++.+. +++.. ++++++|++++||||||.+++ +.+.++|+++|+++|+|++|.+..+
T Consensus 132 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 211 (385)
T 1b5p_A 132 VRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLY 211 (385)
T ss_dssp HHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS
T ss_pred HHHcCCEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhccc
Confidence 999999999998874 23221 357899999999999999988 3456778889999999999986322
Q ss_pred ----CcCCC-CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHH
Q 018172 170 ----TPITG-AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFF 244 (360)
Q Consensus 170 ----~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 244 (360)
.++.. ..+++++++||||.++++|+|+||+++ ++++++.+.+.+.....+.+.+.|.++.++++..... ..++
T Consensus 212 ~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~ 289 (385)
T 1b5p_A 212 EGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACG-PKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEAS-RAFV 289 (385)
T ss_dssp SSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEEC-CHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHH-HHHH
T ss_pred CCCCCCHHHcCCCCEEEEEechhhcCCcccceEEEEe-CHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcc-hHHH
Confidence 12211 117899999999999999999999999 8999999988877677789999999998888620001 2678
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC----chHHHHHHHHhhCeeeeCCCCCC
Q 018172 245 EYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK----EDEDCEKLLRAERIMARGGRRFG 320 (360)
Q Consensus 245 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gI~~~pg~~f~ 320 (360)
++.++.++++++++.+.|+++ ++.+..+.+++ |+|++++ +...+.+.|.++||.++||..|+
T Consensus 290 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~ 355 (385)
T 1b5p_A 290 EMAREAYRRRRDLLLEGLTAL-GLKAVRPSGAF-------------YVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFA 355 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TCCBCCCSBTT-------------EEEEECTTTCSSHHHHHHHHHHTTEECEESGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeE-------------EEEEecCCCCCCHHHHHHHHHHCCeEEecccccC
Confidence 999999999999999999988 56665565554 5676664 33556666669999999999997
Q ss_pred CCCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 321 ADAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 321 ~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
. ++++|||++.+++++++++++|.+++.+
T Consensus 356 ~-~~~iRis~~~~~~~i~~~l~~l~~~l~~ 384 (385)
T 1b5p_A 356 A-FGHVRLSYATSEENLRKALERFARVLGR 384 (385)
T ss_dssp C-TTEEEEECCSCHHHHHHHHHHGGGGC--
T ss_pred C-CCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 5 7899999988999999999999887643
No 3
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=4.7e-40 Score=312.72 Aligned_cols=302 Identities=18% Similarity=0.201 Sum_probs=245.3
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCC------CCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCC
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSD------GRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYY 97 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~------~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~ 97 (360)
..|++..|+ ++||+++++++.. +|...++ +++|++|+|+++++..++..++++||+ |++++|+|
T Consensus 72 ~~Y~~~~G~-----~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~----Vlv~~p~y 142 (425)
T 2r2n_A 72 LQYSPSAGI-----PELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDN----VLLDEPAY 142 (425)
T ss_dssp TSCCCTTCC-----HHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCE----EEEESSCC
T ss_pred cCCCCCCCC-----HHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCE----EEEeCCCc
Confidence 469999998 9999999998754 4665533 368999999999999999999999998 99999999
Q ss_pred CCcHHHHHHhCCeeeeecCCcccccc-------C------------CCeeEEEE-cCCCCCCcccchH----HHHHHhhh
Q 018172 98 SQYPAETDYLRSGLYKWDGDANTFDK-------N------------NGAYIEVV-NSPNNPDGTIREA----VLAKVNRS 153 (360)
Q Consensus 98 ~~~~~~~~~~g~~~~~~~~~~~~~~~-------~------------~~~~~i~~-~~p~NPtG~~~~~----~~~~~~~~ 153 (360)
..+...++..|++++.++.+.++++. + +++++|++ ++||||||.+++. .+.++|++
T Consensus 143 ~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~ 222 (425)
T 2r2n_A 143 SGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARK 222 (425)
T ss_dssp HHHHHHHGGGTCEEEEECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEeCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHH
Confidence 99999999999999999875444322 1 35788866 7999999999983 56678888
Q ss_pred cCcEEEEeecccCCC-----CCcCC--CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHH
Q 018172 154 AEGKLIHDLAYYWPQ-----YTPIT--GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQ 226 (360)
Q Consensus 154 ~~~~li~D~ay~~~~-----~~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 226 (360)
+|+++|+||+|.+.. ..++. +..+++++++||||.++ +|+|+||+++ ++++++.+.......+.+.|.+.|
T Consensus 223 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~-~~~l~~~l~~~~~~~~~~~~~~~q 300 (425)
T 2r2n_A 223 YDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTG-PKPLIERVILHIQVSTLHPSTFNQ 300 (425)
T ss_dssp TTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEE-EHHHHHHHHHHHHTTTCSSCHHHH
T ss_pred cCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEec-CHHHHHHHHHHHHHhcCCCCHHHH
Confidence 999999999998421 22222 34568899999999999 9999999999 789999999888777789999999
Q ss_pred HHHHHHhcccC-CCchhHHHHHHHHHHHHHHHHHHHHHhc-CCc-ccCCCCCcccccccccCCCCCCcccccCCch----
Q 018172 227 LRAAKILGIVS-DDYPNFFEYGRRLMSERWNMLRQVIRQS-GVF-GLPEYPLEYCNFTGKFTNSHPGFAWLESKED---- 299 (360)
Q Consensus 227 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 299 (360)
.++.++++... +.+..+++++++.++++++.+.+.|+++ +++ .+..|.+++ |+|+++++.
T Consensus 301 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~-------------~~~~~~~~~~~~~ 367 (425)
T 2r2n_A 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGM-------------FLWIKVKGINDVK 367 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSS-------------EEEEEETTCSCCH
T ss_pred HHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceE-------------EEEEEeCCCCCHH
Confidence 99999887421 2234788999999999999999999884 444 334444443 788888642
Q ss_pred HHHHHHHHhhCeeeeCCCCCCCC----CCeEEEEec-CChHHHHHHHHHHHHHHhc
Q 018172 300 EDCEKLLRAERIMARGGRRFGAD----AKYARVSML-SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 300 ~~~~~~l~~~gI~~~pg~~f~~~----~~~~R~s~~-~~~e~~~~~~~~l~~~~~~ 350 (360)
+.+.+.|.++||.++||..|+.. .+++|||++ .+++++++++++|.+++++
T Consensus 368 ~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 368 ELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp HHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 34688888999999999999742 479999998 4999999999999998864
No 4
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=1.3e-39 Score=311.68 Aligned_cols=299 Identities=17% Similarity=0.162 Sum_probs=245.9
Q ss_pred ccccCCCCccccccHHHHHHHHHHH-hhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLH-HVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~-~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. ++||+++++++ ..+|.+ + +++|++|+|+++++..++..++++||+ |+++.|+|..+...
T Consensus 112 ~~Y~~~~g~-----~~lr~~ia~~~~~~~g~~-~-~~~v~~t~G~~~al~~~~~~l~~~Gd~----Vlv~~p~y~~~~~~ 180 (448)
T 3aow_A 112 LQYGTTKGF-----TPLRETLMKWLGKRYGIS-Q-DNDIMITSGSQQALDLIGRVFLNPGDI----VVVEAPTYLAALQA 180 (448)
T ss_dssp HSCCCTTCC-----HHHHHHHHHHHHHHHCCC-T-TSEEEEESSHHHHHHHHHHHHCCTTCE----EEEEESCCHHHHHH
T ss_pred hCCCCCCCc-----HHHHHHHHHHHHHhcCcC-C-hhhEEEeCcHHHHHHHHHHHHcCCCCE----EEEeCCChHHHHHH
Confidence 468888887 99999999998 455655 3 458999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcccccc-------C----C--CeeEE-EEcCCCCCCcccch----HHHHHHhhhcCcEEEEeeccc
Q 018172 104 TDYLRSGLYKWDGDANTFDK-------N----N--GAYIE-VVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYY 165 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~~~~-------~----~--~~~~i-~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~ 165 (360)
++..|++++.++.+.++++. + + ++++| ++++|+||||.+++ +.+.++|+++|+++|+||+|.
T Consensus 181 ~~~~g~~~~~v~~~~~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~ 260 (448)
T 3aow_A 181 FNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYG 260 (448)
T ss_dssp HHTTCCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCT
T ss_pred HHHcCCEEEEeccCCCCCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 99999999998875444322 2 3 78997 57899999999998 356778888999999999998
Q ss_pred CCCC-----CcCC--CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCC
Q 018172 166 WPQY-----TPIT--GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSD 238 (360)
Q Consensus 166 ~~~~-----~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 238 (360)
+..+ .++. +..++++++.||||.++ +|+|+||+++ ++++++.+.......+.+.|.+.|.++.++|+. .
T Consensus 261 ~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~-~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~--~ 336 (448)
T 3aow_A 261 ELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVG-DPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDG--G 336 (448)
T ss_dssp TCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEE-CHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHT--T
T ss_pred cccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEe-CHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh--C
Confidence 6322 2222 33468999999999999 9999999999 799999998877766778899999999998873 2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhc-C-CcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhhCeee
Q 018172 239 DYPNFFEYGRRLMSERWNMLRQVIRQS-G-VFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERIMA 313 (360)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~ 313 (360)
.++.++++.++.++++++++.+.|+++ + ++.+..|.+++ |+|+++++ ...+.+.|.++||.+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~-------------~~~v~~~~~~~~~~l~~~l~~~gV~v 403 (448)
T 3aow_A 337 YLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGM-------------FIWVTLPDGIDSKKMLERAIKKGVAY 403 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSS-------------EEEEECSTTCCHHHHHHHHHHTTEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccE-------------EEEEEcCCCCCHHHHHHHHHHCCcEE
Confidence 245889999999999999999999874 5 45555554444 78888874 356667777779999
Q ss_pred eCCCCCCC---CCCeEEEEecC-ChHHHHHHHHHHHHHHhch
Q 018172 314 RGGRRFGA---DAKYARVSMLS-REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 314 ~pg~~f~~---~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~ 351 (360)
+||..|+. .++++|+|++. ++|++++++++|.+++++.
T Consensus 404 ~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~~~ 445 (448)
T 3aow_A 404 VPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEE 445 (448)
T ss_dssp EEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHHHHH
T ss_pred EcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 99998853 36799999977 7999999999999998764
No 5
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=3.4e-40 Score=313.61 Aligned_cols=310 Identities=35% Similarity=0.631 Sum_probs=247.8
Q ss_pred cccCCC-C---ccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh--------cCCCCCCCceEEEe
Q 018172 26 YLSDMG-N---VCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL--------SSPGGPEPISVVSA 93 (360)
Q Consensus 26 ~y~~~~-g---~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l--------~~~gd~~~~~vl~~ 93 (360)
.|++.. | . ++||++++++++..+....++++|++|+|+++++++++.+| +++||+ |+++
T Consensus 91 ~Y~~~~~G~~~~-----~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~----Vlv~ 161 (427)
T 2hox_A 91 SYFFNPVSNFIS-----FELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESK----VVAH 161 (427)
T ss_dssp SSSCSSCCTTCC-----HHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEE----EEEC
T ss_pred cCCCCCCCccch-----HHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCCCCCE----EEEe
Confidence 388777 8 7 99999999999866544334569999999999999999999 899998 9999
Q ss_pred CCCCCCcHHHHHHhCCeeeeecCCcccccc--CCCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecccCCCCCc
Q 018172 94 APYYSQYPAETDYLRSGLYKWDGDANTFDK--NNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYWPQYTP 171 (360)
Q Consensus 94 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay~~~~~~~ 171 (360)
.|+|+.+...++..|++++.+.+|.+.++. ++++++|++++||||||.+++ . +++ ++..++|++|.++....
T Consensus 162 ~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~-~---~l~--~~~~i~d~~~~~~~~s~ 235 (427)
T 2hox_A 162 APFYPVFREQTKYFDKKGYVWAGNAANYVNVSNPEQYIEMVTSPNNPEGLLRH-A---VIK--GCKSIYDMVYYWPHYTP 235 (427)
T ss_dssp SSCCHHHHHHHHHSCBTTEEEEEEGGGGTTCSCGGGEEEEEESSCTTTCCCCC-C---SST--TCEEEEECTTCSTTTSC
T ss_pred CCCcccHHHHHHHcCCeeeeecCCHHHHHHhhcCCceEEEEcCCCCCcccccH-H---HHc--CCCEEEeecccCCCCCc
Confidence 999999999999999999988888777765 457899999999999999999 3 233 56789999887532221
Q ss_pred CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCC-------CchhHH
Q 018172 172 ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSD-------DYPNFF 244 (360)
Q Consensus 172 ~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~ 244 (360)
..-..+++++++||||.+|++|+|+||++++++++++.+.+.+.....+++.+.|.++..+|+...+ .++.++
T Consensus 236 ~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~ 315 (427)
T 2hox_A 236 IKYKADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLN 315 (427)
T ss_dssp CCSCBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHH
T ss_pred cccCCCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHH
Confidence 1112678999999999999999999999985599999999988777788999999999888874211 234788
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccC--C-CCCcccccccccCCCCCCcccccCCch--HHHHHHHHhhCeeeeCCCCC
Q 018172 245 EYGRRLMSERWNMLRQVIRQSGVFGLP--E-YPLEYCNFTGKFTNSHPGFAWLESKED--EDCEKLLRAERIMARGGRRF 319 (360)
Q Consensus 245 ~~~~~~~~~~~~~l~~~l~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~gI~~~pg~~f 319 (360)
++.++.++++++++.+.|++++++.+. . +.+. .+.....+..++|+|++++.. +.+..+++++||.++||..|
T Consensus 316 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~--~~~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f 393 (427)
T 2hox_A 316 TFGFKKLRERWVNITALLDQSDRFSYQELPQSEYC--NYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGF 393 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEE--TTTTEEECCCCSEEEEEECSGGGCSHHHHHHHTTEECEEGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCcccccccccccc--ccccccCCCCceEEEEECCCcHHHHHHHHHHHCCEEEcCCCcc
Confidence 899999999999999999998666542 1 2210 000112234566899999743 55666777899999999999
Q ss_pred CCCCCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 320 GADAKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 320 ~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
+..++++|+|++.++|++++++++|++++.+.+
T Consensus 394 ~~~~~~~Ris~~~~~e~l~~~l~~l~~~~~~~~ 426 (427)
T 2hox_A 394 EASSRYVRLSLIKTQDDFDQLMYYLKDMVKAKR 426 (427)
T ss_dssp TSCTTEEEEECSSCHHHHHHHHHHHHHHHTCC-
T ss_pred CCCCCEEEEEecCCHHHHHHHHHHHHHHHhhcc
Confidence 765789999998899999999999999987654
No 6
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=1.1e-38 Score=300.02 Aligned_cols=296 Identities=19% Similarity=0.234 Sum_probs=242.2
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHhh-cCCC-CCCCCcEEEcCChHHHHHHHHHhhcCCC-----CCCCceEEEeCC
Q 018172 23 LMSYLSDMGNVCWFLVPELAEAINNLHHV-VDNA-VSDGRHIVIGTGSTQLYQAALYALSSPG-----GPEPISVVSAAP 95 (360)
Q Consensus 23 ~~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~-~~~~~~i~~t~G~t~~l~~~~~~l~~~g-----d~~~~~vl~~~p 95 (360)
....|++..|. +++|+++++++.. +|.+ ++++++|++|+|+++++..++..++++| |+ |+++.|
T Consensus 58 ~~~~y~~~~g~-----~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~----vl~~~p 128 (396)
T 3jtx_A 58 ELEKYPLTAGL-----PELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPA----IVSPNP 128 (396)
T ss_dssp GGGSCCCTTCC-----HHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCE----EEEEES
T ss_pred hccCCCCCCCc-----HHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCE----EEEcCC
Confidence 34568888887 9999999999753 3554 4443389999999999999999999986 56 999999
Q ss_pred CCCCcHHHHHHhCCeeeeecCCcccccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEee
Q 018172 96 YYSQYPAETDYLRSGLYKWDGDANTFDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDL 162 (360)
Q Consensus 96 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ 162 (360)
+|..+...++..|.+++.++.+.+++.. ++++++|++++||||||.+++. .+.++|+++|+++|+||
T Consensus 129 ~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 208 (396)
T 3jtx_A 129 FYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDE 208 (396)
T ss_dssp CCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEC
T ss_pred CcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 9999999999999999999876555432 2479999999999999999982 36678888999999999
Q ss_pred cccCCCCCc---CC---------CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHH
Q 018172 163 AYYWPQYTP---IT---------GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAA 230 (360)
Q Consensus 163 ay~~~~~~~---~~---------~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 230 (360)
+|.+..+.. .. ...++++++.|+||.|+++|+|+||+++ ++++++.+.......+.+.|.+.|.++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 287 (396)
T 3jtx_A 209 CYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAG-DAELLKNFLLYRTYHGSAMSIPVQRASI 287 (396)
T ss_dssp TTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEE-CHHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred cccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEe-CHHHHHHHHHHHhhcccCCCHHHHHHHH
Confidence 999633221 11 1368899999999999999999999998 8999999998887777899999999999
Q ss_pred HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--h-HHHHHHHH
Q 018172 231 KILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--D-EDCEKLLR 307 (360)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~l~ 307 (360)
++++. . .++++.++.++++++.+.+.|+++ +.+..+.++ +|+|++++. . +.+..+++
T Consensus 288 ~~l~~---~--~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~ 347 (396)
T 3jtx_A 288 AAWDD---E--QHVIDNRRLYQEKFERVIPILQQV--FDVKLPDAS-------------FYIWLKVPDGDDLAFARNLWQ 347 (396)
T ss_dssp HHHHC---C--HHHHHHHHHHHHHHHHHHHHHTTT--SCCCCCSSS-------------SEEEEECTTSCHHHHHHHHHH
T ss_pred HHhCC---H--HHHHHHHHHHHHHHHHHHHHHHhc--CCccCCCee-------------EEEEEECCCCCHHHHHHHHHH
Confidence 98872 2 889999999999999999999876 233334333 378888874 3 44455557
Q ss_pred hhCeeeeCCCCCCC-------CCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 308 AERIMARGGRRFGA-------DAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 308 ~~gI~~~pg~~f~~-------~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
++||.+.||..|+. ..+++||+++.+++++++++++|.+++
T Consensus 348 ~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 348 KAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVSLY 395 (396)
T ss_dssp HHCEECEEGGGGCCCCTTCCTTTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred HCCEEEeCChHhCCcccccCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 78999999998864 357999999889999999999999875
No 7
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=5.7e-39 Score=299.60 Aligned_cols=297 Identities=19% Similarity=0.224 Sum_probs=246.5
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. +++|++++++++. +|..+++ ++|++|+|+++++..++..++++||+ |++++|+|..+...
T Consensus 60 ~~y~~~~~~-----~~l~~~la~~~~~~~g~~~~~-~~v~~~~g~~~a~~~~~~~~~~~gd~----vl~~~p~~~~~~~~ 129 (370)
T 2z61_A 60 THYTDSRGI-----LELREKISELYKDKYKADIIP-DNIIITGGSSLGLFFALSSIIDDGDE----VLIQNPCYPCYKNF 129 (370)
T ss_dssp CSCCCTTCC-----HHHHHHHHHHHHHHSSCCCCG-GGEEEESSHHHHHHHHHHHHCCTTCE----EEEESSCCTHHHHH
T ss_pred cCCCCCCCC-----HHHHHHHHHHHHHHhCCCCCh-hhEEECCChHHHHHHHHHHhcCCCCE----EEEeCCCchhHHHH
Confidence 457777776 9999999999875 5655655 58999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcccccc--CCCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecccCCCC----CcCC---C
Q 018172 104 TDYLRSGLYKWDGDANTFDK--NNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYWPQY----TPIT---G 174 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~~~~--~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay~~~~~----~~~~---~ 174 (360)
++..|.+++.+++|.+.+.. ++++++|++++||||||.+++..+.++|+++|+++|+||+|.+..+ .++. +
T Consensus 130 ~~~~g~~~~~v~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 209 (370)
T 2z61_A 130 IRFLGAKPVFCDFTVESLEEALSDKTKAIIINSPSNPLGEVIDREIYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDE 209 (370)
T ss_dssp HHHTTCEEEEECSSHHHHHHHCCSSEEEEEEESSCTTTCCCCCHHHHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCT
T ss_pred HHHcCCEEEEeCCCHHHHHHhcccCceEEEEcCCCCCcCcccCHHHHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccC
Confidence 99999999999866665543 4578999999999999999984488899999999999999986432 1222 2
Q ss_pred CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHH
Q 018172 175 AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSER 254 (360)
Q Consensus 175 ~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 254 (360)
..++++++.|+||.++++|+|+||+++ ++++++.+.......+.+.|.+.|.++.++++.+ . +.++++.++.++++
T Consensus 210 ~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~--~~~~~~~~~~~~~~ 285 (370)
T 2z61_A 210 NLEKTILINGFSKLYAMTGWRIGYVIS-NDEIIEAILKLQQNLFISAPTISQYAALKAFEKE-T--EREINSMIKEFDRR 285 (370)
T ss_dssp TCSSEEEEEESTTTTTCGGGCCEEEEC-CHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHH-H--HHHHHHHHHHHHHH
T ss_pred CCCcEEEEecChhccCCccceEEEEEE-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhcc-C--HHHHHHHHHHHHHH
Confidence 457899999999999999999999999 7899999988877677789999999888877631 1 37889999999999
Q ss_pred HHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-chHHHHHHHH-hhCeeeeCCCCCCC-CCCeEEEEec
Q 018172 255 WNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-EDEDCEKLLR-AERIMARGGRRFGA-DAKYARVSML 331 (360)
Q Consensus 255 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~-~~gI~~~pg~~f~~-~~~~~R~s~~ 331 (360)
++++.+.|+++ ++.+..+.+++ |+|++++ +...+.+.|. ++||.++||..|+. .++++|++++
T Consensus 286 ~~~l~~~L~~~-g~~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~ 351 (370)
T 2z61_A 286 RRLVLKYVKDF-GWEVNNPIGAY-------------YVFPNIGEDGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA 351 (370)
T ss_dssp HHHHHHHHHHT-TCBCCCCCBTT-------------EECCBCSSCHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC
T ss_pred HHHHHHHHHHc-CCeecCCCcce-------------EEEEecCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe
Confidence 99999999988 55554444333 6788876 4455666665 78999999998874 4679999998
Q ss_pred CChHHHHHHHHHHHHHHh
Q 018172 332 SREEIFNIFLERLSAIQG 349 (360)
Q Consensus 332 ~~~e~~~~~~~~l~~~~~ 349 (360)
.++|++++++++|.++++
T Consensus 352 ~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 352 NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp SCHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 899999999999999875
No 8
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.6e-39 Score=310.79 Aligned_cols=310 Identities=16% Similarity=0.184 Sum_probs=242.5
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhc--CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVV--DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP 101 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~--~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~ 101 (360)
...|+++.|. +++|++++++++.+ |.++++ ++|++|+|+++++..++..+.++||.++..|+++.|+|+.+.
T Consensus 122 ~~~Y~~~~G~-----~~lr~~ia~~~~~~~gG~~~~~-~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~ 195 (498)
T 3ihj_A 122 LGSYSASQGV-----NCIREDVAAYITRRDGGVPADP-DNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYS 195 (498)
T ss_dssp ------CCSC-----HHHHHHHHHHHHHHTTTCCCCG-GGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHH
T ss_pred CCCCCCCCCH-----HHHHHHHHHHHHHhcCCCCCCc-ccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHH
Confidence 3569999998 99999999998755 577765 589999999999999999999988611223999999999999
Q ss_pred HHHHHhCCeeeeecCCcc---cccc-------CC-----CeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEee
Q 018172 102 AETDYLRSGLYKWDGDAN---TFDK-------NN-----GAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDL 162 (360)
Q Consensus 102 ~~~~~~g~~~~~~~~~~~---~~~~-------~~-----~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ 162 (360)
..++..|++++.++.+.+ +++. ++ ++++|++++||||||.+++. .+.++|+++++++|+||
T Consensus 196 ~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De 275 (498)
T 3ihj_A 196 AVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADE 275 (498)
T ss_dssp HHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEc
Confidence 999999999999987754 2222 11 58999999999999999983 46678888999999999
Q ss_pred cccCCCC------CcCCC----------CCCccEEEecccccc-CCCCceEEEEee--cCHHHHHHHHHHHhhccccCCh
Q 018172 163 AYYWPQY------TPITG----------AADHDIMLFTLSKCT-GHAGSRIGWALV--KDTEVARKMTRFIELGSIGVSK 223 (360)
Q Consensus 163 ay~~~~~------~~~~~----------~~~~~i~~~S~sK~~-~~~G~r~G~~~~--~~~~~~~~l~~~~~~~~~~~~~ 223 (360)
+|.+..+ .++.. ...++++++||||.| |++|+|+||++. .++++++.+..... ...+.+.
T Consensus 276 ~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~-~~~~~~~ 354 (498)
T 3ihj_A 276 VYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLS-VRLCPPV 354 (498)
T ss_dssp TTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHH-HSCCCCH
T ss_pred CccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHh-ccCCCCH
Confidence 9985322 12211 123468999999999 899999999983 38999999988765 5678899
Q ss_pred HHHHHHHHHhcccC---CCch---hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC
Q 018172 224 ESQLRAAKILGIVS---DDYP---NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK 297 (360)
Q Consensus 224 ~~~~~~~~~l~~~~---~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (360)
+.|.++..+++... ..++ .+.+++++.++++++++.+.|++++++.+..|.+++ |+|+++.
T Consensus 355 ~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~-------------~~~~~l~ 421 (498)
T 3ihj_A 355 SGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAM-------------YAFPRIF 421 (498)
T ss_dssp HHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSS-------------EECCEEC
T ss_pred HHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEE-------------EEEEecc
Confidence 99999888886321 1222 345677899999999999999999888888787776 5554432
Q ss_pred ---------------chHH-HHHHHHhhCeeeeCCCCCCC--CCCeEEEEecCChHHHHHHHHHHHHHHhchhc
Q 018172 298 ---------------EDED-CEKLLRAERIMARGGRRFGA--DAKYARVSMLSREEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 298 ---------------~~~~-~~~~l~~~gI~~~pg~~f~~--~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~~ 353 (360)
+.+. +.++|+++||.++||+.|+. .++++|++++.+++++++++++|.+++.+.++
T Consensus 422 ~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~~~e~l~~~i~~L~~~~~~~~~ 495 (498)
T 3ihj_A 422 IPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLKTVLQKVKDFHINFLE 495 (498)
T ss_dssp CCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1122 67889999999999999984 45699999977999999999999999987654
No 9
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=9.9e-39 Score=303.79 Aligned_cols=300 Identities=15% Similarity=0.196 Sum_probs=244.5
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
+.|.+..|. +++|++++++++..+.++.+ ++|++|+|+++++..++..+.++||+ |+++.|+|..+...+
T Consensus 90 ~~y~~~~g~-----~~lr~~la~~~~~~~~~~~~-~~v~~t~g~t~al~~~~~~l~~~gd~----vl~~~p~~~~~~~~~ 159 (427)
T 3dyd_A 90 NGYAPSIGF-----LSSREEIASYYHCPEAPLEA-KDVILTSGCSQAIDLCLAVLANPGQN----ILVPRPGFSLYKTLA 159 (427)
T ss_dssp SSCCCTTCC-----HHHHHHHHHHHCBTTBCCCG-GGEEEESSHHHHHHHHHHHHCCTTCE----EEEEESCCTHHHHHH
T ss_pred CCCCCCCCc-----HHHHHHHHHHHhhcCCCCCh-HHEEEecCcHHHHHHHHHHhcCCCCE----EEEcCCCchhHHHHH
Confidence 468777887 99999999999866665555 58999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecCCc--------ccccc--CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC--
Q 018172 105 DYLRSGLYKWDGDA--------NTFDK--NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ-- 168 (360)
Q Consensus 105 ~~~g~~~~~~~~~~--------~~~~~--~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~-- 168 (360)
+..|.+++.++.+. +.+.. +++++++++++||||||.+++ +.+.++|+++|+++|+|++|.+..
T Consensus 160 ~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~ 239 (427)
T 3dyd_A 160 ESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFS 239 (427)
T ss_dssp HHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCS
T ss_pred HHcCCEEEEEecccccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccC
Confidence 99999999887643 22222 357899999999999999998 356678888999999999998532
Q ss_pred ---CCcCC--CCCCccEEEeccccccCCCCceEEEEeecC------HHHHHHHHHHHhhccccCChHHHHHHHHHhcccC
Q 018172 169 ---YTPIT--GAADHDIMLFTLSKCTGHAGSRIGWALVKD------TEVARKMTRFIELGSIGVSKESQLRAAKILGIVS 237 (360)
Q Consensus 169 ---~~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 237 (360)
..++. +...++++++||||.|+++|+|+||+++++ +++++.+...... .++.+.+.|.++.++++...
T Consensus 240 g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~-~~~~~~~~~~a~~~~L~~~~ 318 (427)
T 3dyd_A 240 DCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQR-ILGPCTIVQGALKSILCRTP 318 (427)
T ss_dssp SCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHHHSC
T ss_pred CCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHHhcC
Confidence 11221 234457889999999999999999999854 5788888776543 57899999999999887422
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC--------ch-HHHHHHHHh
Q 018172 238 DDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--------ED-EDCEKLLRA 308 (360)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~l~~ 308 (360)
..++++.+++++++++++.+.|++++++....|.+++ |+|+.++ +. +.+..++++
T Consensus 319 ---~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~-------------~~~~~l~~~~~~~~~~~~~~~~~l~~~ 382 (427)
T 3dyd_A 319 ---GEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAM-------------YLMVGIEMEHFPEFENDVEFTERLVAE 382 (427)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTT-------------EEEEEECGGGCTTCSSHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeE-------------EEEEecCHhhcCCCCCHHHHHHHHHHH
Confidence 3788999999999999999999998777665566554 6666554 22 445556678
Q ss_pred hCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 309 ERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 309 ~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
+||.++||..|+. ++++|++++.+++++++++++|.+++++.+
T Consensus 383 ~gV~v~~g~~~~~-~~~iRis~~~~~e~i~~~l~~l~~~l~~~~ 425 (427)
T 3dyd_A 383 QSVHCLPATCFEY-PNFIRVVITVPEVMMLEACSRIQEFCEQHY 425 (427)
T ss_dssp HCEECEEGGGGTC-TTEEEEESCSCHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEECCcccCC-CCeEEEEECCCHHHHHHHHHHHHHHHHHhh
Confidence 9999999999985 789999998899999999999999997654
No 10
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=1.8e-38 Score=296.73 Aligned_cols=295 Identities=17% Similarity=0.219 Sum_probs=243.8
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCC--CCCCCceEEEeCCCCCC
Q 018172 23 LMSYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSP--GGPEPISVVSAAPYYSQ 99 (360)
Q Consensus 23 ~~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~--gd~~~~~vl~~~p~~~~ 99 (360)
....|++..|. +++|+++++++.. +|.++.+ ++|++|+|+++++..++..++++ ||+ |+++.|+|..
T Consensus 51 ~~~~y~~~~g~-----~~lr~~la~~l~~~~g~~~~~-~~i~~t~g~~~al~~~~~~~~~~~~gd~----vl~~~p~~~~ 120 (376)
T 3ezs_A 51 SLNIYPKSAFE-----ESLRAAQRGFFKRRFKIELKE-NELISTLGSREVLFNFPSFVLFDYQNPT----IAYPNPFYQI 120 (376)
T ss_dssp GGGSCCCTTCC-----HHHHHHHHHHHHHHHSCCCCG-GGEEEESSSHHHHHHHHHHHTTTCSSCE----EEEEESCCTH
T ss_pred hcCCCCCCCCC-----HHHHHHHHHHHHHHhCCCCCH-HHEEECcCcHHHHHHHHHHHcCCCCCCE----EEEecCCcHh
Confidence 34668888887 9999999999753 3555555 58999999999999999999999 898 9999999999
Q ss_pred cHHHHHHhCCeeeeecCCcc-cccc------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCC
Q 018172 100 YPAETDYLRSGLYKWDGDAN-TFDK------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQ 168 (360)
Q Consensus 100 ~~~~~~~~g~~~~~~~~~~~-~~~~------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~ 168 (360)
+...++..|.+++.++.+.+ ++.. .+++++|++++||||||.+++. .+.++|+++|+++|+||+|.+..
T Consensus 121 ~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 200 (376)
T 3ezs_A 121 YEGAAKFIKAKSLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIY 200 (376)
T ss_dssp HHHHHHHTTCEEEEEECCGGGTSCCCCCHHHHHHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCB
T ss_pred HHHHHHHcCCEEEEcccCCCCCcchhHHhhhccCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhc
Confidence 99999999999999998765 3322 2478999999999999999982 45567888999999999999632
Q ss_pred CC----cCCC--------CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhccc
Q 018172 169 YT----PITG--------AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIV 236 (360)
Q Consensus 169 ~~----~~~~--------~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (360)
+. +... ..++++++.|+||.+|++|+|+||+++ ++++++.+.......+++.|.+.|.++.++++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~- 278 (376)
T 3ezs_A 201 ENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAG-DSRLLEKYKAFRAYLGYTSANAIQKASEAAWLD- 278 (376)
T ss_dssp SSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEE-CHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC-
T ss_pred cCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEee-CHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC-
Confidence 21 1111 578899999999999999999999998 899999999888777888999999999998873
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHh-hCeeeeC
Q 018172 237 SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRA-ERIMARG 315 (360)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gI~~~p 315 (360)
. .++++.++.++++++.+.+.|+ ++. .+.+ ++|+|+++++...+.+.|.+ +||.++|
T Consensus 279 --~--~~~~~~~~~~~~~~~~l~~~l~---~~~--~~~~-------------~~~~~~~~~~~~~~~~~l~~~~gi~v~~ 336 (376)
T 3ezs_A 279 --D--RHAEFFRNIYANNLKLARKIFK---NTL--IYPY-------------SFYVYLPVQNGENFAKTLYQNEGIITLP 336 (376)
T ss_dssp --S--HHHHHHHHHHHHHHHHHHHHST---TCC--CCSB-------------SSEEEEECSCHHHHHHHHHHHHCCBCEE
T ss_pred --c--HHHHHHHHHHHHHHHHHHHHhc---CCC--CCCc-------------ceEEEEECCCHHHHHHHHHHhCCEEEeC
Confidence 2 7799999999999999999987 222 2333 34788888765555555555 8999999
Q ss_pred CCCCCC---CCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 316 GRRFGA---DAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 316 g~~f~~---~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
|..|+. .++++|++++.++|++++++++|.+++++.
T Consensus 337 g~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~ 375 (376)
T 3ezs_A 337 ALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETYRENH 375 (376)
T ss_dssp GGGGCSTTTTTTEEEEECCSCHHHHHHHHHHHHHHHCC-
T ss_pred cHHhCCCCCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 999972 578999999779999999999999998764
No 11
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=8.4e-39 Score=300.61 Aligned_cols=299 Identities=18% Similarity=0.189 Sum_probs=240.8
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. +++|++++++++. +|.++.+ ++|++|+|++++++.++..++++||+ |+++.|+|..+...
T Consensus 62 ~~y~~~~g~-----~~lr~~ia~~~~~~~g~~~~~-~~v~~t~g~~~al~~~~~~l~~~gd~----vl~~~p~~~~~~~~ 131 (391)
T 3h14_A 62 LGYTVALGL-----PALRQRIARLYGEWYGVDLDP-GRVVITPGSSGGFLLAFTALFDSGDR----VGIGAPGYPSYRQI 131 (391)
T ss_dssp -------CC-----HHHHHHHHHHHHHHHCCCCCG-GGEEEESSHHHHHHHHHHHHCCTTCE----EEEEESCCHHHHHH
T ss_pred CCCCCCCCh-----HHHHHHHHHHHHHHhCCCCCH-HHEEEecChHHHHHHHHHHhcCCCCE----EEEcCCCCccHHHH
Confidence 468877777 9999999999863 4555555 58999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCccc-ccc------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC----
Q 018172 104 TDYLRSGLYKWDGDANT-FDK------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ---- 168 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~-~~~------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~---- 168 (360)
++..|++++.++.+.++ +.. ..++++|++++||||||.+++ +.+.++|+++|+++|+|++|.+..
T Consensus 132 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 211 (391)
T 3h14_A 132 LRALGLVPVDLPTAPENRLQPVPADFAGLDLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAK 211 (391)
T ss_dssp HHHTTCEEEEEECCGGGTTSCCHHHHTTSCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC
T ss_pred HHHcCCEEEEeecCcccCCCCCHHHHHhcCCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCC
Confidence 99999999999887542 211 117899999999999999998 355678888999999999998532
Q ss_pred CCcCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHH
Q 018172 169 YTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGR 248 (360)
Q Consensus 169 ~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 248 (360)
..+.....+++++++|+||.+|++|+|+||+++ ++++++.+.......+.+.+.+.|.++.++++ . ..++++.+
T Consensus 212 ~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~---~--~~~~~~~~ 285 (391)
T 3h14_A 212 AVTALELTDECYVINSFSKYFSMTGWRVGWMVV-PEDQVRVVERIAQNMFICAPHASQVAALAALD---C--DAELQANL 285 (391)
T ss_dssp CCCGGGTCSSSEEEEESSSTTCCTTSCCEEEEC-CGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTT---C--HHHHHHHH
T ss_pred CcChhhcCCCEEEEEechhccCCccceeEEEEe-CHHHHHHHHHHHhhhccCCCHHHHHHHHHHhC---C--hHHHHHHH
Confidence 222333467899999999999999999999998 88899999888887888999999999988786 2 38899999
Q ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHH-HHhhCeeeeCCCCCCC--
Q 018172 249 RLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKL-LRAERIMARGGRRFGA-- 321 (360)
Q Consensus 249 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-l~~~gI~~~pg~~f~~-- 321 (360)
++++++++.+.+.|++++......+.+++ |+|++++. ...+.+. ++++||.++||..|+.
T Consensus 286 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~ 352 (391)
T 3h14_A 286 DVYKANRKLMLERLPKAGFTRIAPPDGAF-------------YVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPER 352 (391)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCBCCCCBTT-------------EEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCTTT
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCeeE-------------EEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCCCC
Confidence 99999999999999998654444454443 67776653 2445444 5556999999999975
Q ss_pred CCCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 322 DAKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 322 ~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
.++++|+|++.++|++++++++|.+++.+..
T Consensus 353 ~~~~iRis~~~~~~~i~~~l~~l~~~~~~~~ 383 (391)
T 3h14_A 353 GAGTLRFSYARATADIEEGLDRLEAFMQARG 383 (391)
T ss_dssp GGGEEEEECCSCHHHHHHHHHHHHHHHHHC-
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence 3679999998899999999999999998754
No 12
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=9.1e-39 Score=304.00 Aligned_cols=299 Identities=15% Similarity=0.148 Sum_probs=243.7
Q ss_pred ccccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH--HHHHHhhcC--C----------CCCCCc
Q 018172 23 LMSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLY--QAALYALSS--P----------GGPEPI 88 (360)
Q Consensus 23 ~~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l--~~~~~~l~~--~----------gd~~~~ 88 (360)
....|++..|. ++||++++++++. ++++|++|+|+++++ ++++..+++ + ||+
T Consensus 70 ~~~~Y~~~~g~-----~~lr~~ia~~~~~------~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~--- 135 (427)
T 3ppl_A 70 DVRNYGGLDGI-----VDIRQIWADLLGV------PVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVK--- 135 (427)
T ss_dssp BTTSSCCSSCC-----HHHHHHHHHHHTS------CGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCE---
T ss_pred hhcCCCCCCCc-----HHHHHHHHHHhCC------CcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCE---
Confidence 45679988888 9999999999975 556999999999999 578888876 6 787
Q ss_pred eEEEeCCCCCCcHHHHHHhCCeeeeecCCcccccc--------CCCeeEEEEc-CCCCCCcccchH----HHHHHh-hhc
Q 018172 89 SVVSAAPYYSQYPAETDYLRSGLYKWDGDANTFDK--------NNGAYIEVVN-SPNNPDGTIREA----VLAKVN-RSA 154 (360)
Q Consensus 89 ~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~--------~~~~~~i~~~-~p~NPtG~~~~~----~~~~~~-~~~ 154 (360)
|+++.|+|..+...++..|++++.++.+.++++. ++++++|+++ +||||||.+++. .+.++| +++
T Consensus 136 -V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~ 214 (427)
T 3ppl_A 136 -WICPVPGYDRHFSITERFGFEMISVPMNEDGPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAP 214 (427)
T ss_dssp -EEEEESCCHHHHHHHHHTTCEEEEEEEETTEECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSST
T ss_pred -EEEcCCCcHHHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999877655433 3678998765 899999999983 566777 889
Q ss_pred CcEEEEeecccCCCCC-------cCC------CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccC
Q 018172 155 EGKLIHDLAYYWPQYT-------PIT------GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGV 221 (360)
Q Consensus 155 ~~~li~D~ay~~~~~~-------~~~------~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~ 221 (360)
|+++|+||+|.+..+. +.. +..+++++++||||+ +++|+|+||+++ ++++++.+.......+.+.
T Consensus 215 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G~r~G~~~~-~~~l~~~~~~~~~~~~~~~ 292 (427)
T 3ppl_A 215 DFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI-TLAGAGVSFFLT-SAENRKWYTGHAGIRGIGP 292 (427)
T ss_dssp TCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT-SCTTSSCEEEEC-CHHHHHHHHHHHHHHCSCC
T ss_pred CCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc-cCcCccEEEEEc-CHHHHHHHHHHhhcccCCC
Confidence 9999999999852211 111 356889999999998 669999999999 8999999998887778899
Q ss_pred ChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhc----CCcccCCCCCcccccccccCCCCCCcccccCC
Q 018172 222 SKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQS----GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK 297 (360)
Q Consensus 222 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (360)
+.+.|.++.++++.. ..++.++++.++.++++++.+.+.|.+. +++.+..|.++ +|+|++++
T Consensus 293 ~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g-------------~~~~~~~~ 358 (427)
T 3ppl_A 293 NKVNQLAHARYFGDA-EGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGG-------------YFISLDVV 358 (427)
T ss_dssp CHHHHHHHHHHHCSH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBS-------------SCEEEECS
T ss_pred CHHHHHHHHHHHhCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCcc-------------EEEEEECC
Confidence 999999999988731 2234788899999999999999988653 23444445444 48899887
Q ss_pred c--hHHHHHHHHhhCeeeeC-CCCCC----CCCCeEEEEecC-ChHHHHHHHHHHHHHHhchh
Q 018172 298 E--DEDCEKLLRAERIMARG-GRRFG----ADAKYARVSMLS-REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 298 ~--~~~~~~~l~~~gI~~~p-g~~f~----~~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~~ 352 (360)
+ .+.+.+.|.++||.++| |..|+ ..++++|||++. +++++++++++|.+++.+..
T Consensus 359 ~~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l~~~~ 421 (427)
T 3ppl_A 359 PGTASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVATCVLLAA 421 (427)
T ss_dssp TTCHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5 36778889999999999 66664 247899999987 89999999999999997653
No 13
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=1.8e-38 Score=299.86 Aligned_cols=298 Identities=18% Similarity=0.277 Sum_probs=242.7
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. +++|+++++++.. +|.+++++++|++|+|+++++..++..++++||+ |+++.|+|..+...
T Consensus 79 ~~y~~~~g~-----~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~----Vl~~~p~y~~~~~~ 149 (404)
T 2o1b_A 79 QKYGAFHGK-----EAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDY----VLLPDPGYTDYLAG 149 (404)
T ss_dssp HSCCCTTCC-----HHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCE----EEEEESCCSSHHHH
T ss_pred CCCCCCCCC-----HHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCE----EEEcCCCchhHHHH
Confidence 357776777 9999999999843 3555554358999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcccccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC-
Q 018172 104 TDYLRSGLYKWDGDANTFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY- 169 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~- 169 (360)
++..|.+++.++.+.+++.. ++++++|++++||||||.+++ +.+.++|+++|+++|+||+|.+..+
T Consensus 150 ~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~ 229 (404)
T 2o1b_A 150 VLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFD 229 (404)
T ss_dssp HHHTTCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSS
T ss_pred HHHCCCEEEEeccCcccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccC
Confidence 99999999998876544321 246899999999999999997 3566788889999999999986322
Q ss_pred ---CcCCC---CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 170 ---TPITG---AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 170 ---~~~~~---~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
.++.. ..++++++.|+||.+|++|+|+||+++ ++++++.+.......+.+.+.+.|.++.++++.. +.+
T Consensus 230 g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~ 304 (404)
T 2o1b_A 230 AKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVG-NKDMIQALKKYQTHTNAGMFGALQDAAIYALNHY----DDF 304 (404)
T ss_dssp SCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEE-CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC----HHH
T ss_pred CCCCChhhcCCCCCCEEEEEecchhccCchhheEeEec-CHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcC----HHH
Confidence 12222 235789999999999999999999998 8999999988877677889999999999888742 378
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHH-HHhhCeeeeCCCCC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKL-LRAERIMARGGRRF 319 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-l~~~gI~~~pg~~f 319 (360)
+++.++.++++++++.+.|+++ ++.+..+.+++ |+|+++++. ..+.+. ++++||.++||..|
T Consensus 305 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~-------------~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f 370 (404)
T 2o1b_A 305 LEEQSNVFKTRRDRFEAMLAKA-DLPFVHAKGGI-------------YVWLETPPGYDSEQFEQFLVQEKSILVAPGKPF 370 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCCEECCCBSS-------------EEEEECCTTCCHHHHHHHHHHHHCEECEESGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCeecCCCcce-------------EEEEeCCCCCCHHHHHHHHHHHCCEEEeCchhh
Confidence 9999999999999999999988 45544444333 678887642 444444 55789999999988
Q ss_pred CC-CCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 320 GA-DAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 320 ~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
+. .++++||+++.++|++++++++|.+++++
T Consensus 371 ~~~~~~~iRis~~~~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 371 GENGNRYVRISLALDDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp CGGGTTEEEEECCSCTTHHHHHHHHHHGGGGG
T ss_pred CcCCCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 64 36799999988889999999999998865
No 14
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=1.3e-38 Score=302.24 Aligned_cols=303 Identities=16% Similarity=0.215 Sum_probs=247.0
Q ss_pred cccccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|++..|. +++|++++++++ .+|.+++++++|++|+|+++++..++..++++||+ |+++.|+|..+..
T Consensus 60 ~~~y~~~~g~-----~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~----vl~~~p~~~~~~~ 130 (422)
T 3fvs_A 60 LNQYTKTFGY-----PPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDE----VIIIEPFFDCYEP 130 (422)
T ss_dssp GGSCCCTTCC-----HHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCE----EEEEESCCTTHHH
T ss_pred cCCCCCCCCC-----HHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCE----EEEcCCCchhhHH
Confidence 3568888887 999999999987 45665655358999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCCc----cc---------ccc-------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEE
Q 018172 103 ETDYLRSGLYKWDGDA----NT---------FDK-------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKL 158 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~----~~---------~~~-------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~l 158 (360)
.++..|.+++.++.+. ++ ++. ++++++|++++||||||.+++ +.+.++|+++|+++
T Consensus 131 ~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~l 210 (422)
T 3fvs_A 131 MTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVC 210 (422)
T ss_dssp HHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEE
T ss_pred HHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEE
Confidence 9999999999888764 22 111 357999999999999999996 45667888899999
Q ss_pred EEeecccCCC-----CCcC---CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHH
Q 018172 159 IHDLAYYWPQ-----YTPI---TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAA 230 (360)
Q Consensus 159 i~D~ay~~~~-----~~~~---~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 230 (360)
|+||+|.+.. ..++ ....++++++.|+||.+|++|+|+||+++ ++++++.+........++.+.+.|.++.
T Consensus 211 i~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 289 (422)
T 3fvs_A 211 ITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLG-PDHIMKHLRTVHQNSVFHCPTQSQAAVA 289 (422)
T ss_dssp EEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEEC-CHHHHHHHHHHHHTTTCCCCHHHHHHHH
T ss_pred EEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEe-CHHHHHHHHHHHhhccCCCCcHHHHHHH
Confidence 9999998521 1122 22347789999999999999999999998 8999999988877778889999999999
Q ss_pred HHhccc---CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---------
Q 018172 231 KILGIV---SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--------- 298 (360)
Q Consensus 231 ~~l~~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 298 (360)
++++.. ......++++.++.++++++++.+.|+++ ++.+..|.+++ |+|++++.
T Consensus 290 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~ 355 (422)
T 3fvs_A 290 ESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GLKPIIPQGSY-------------FLITDISDFKRKMPDLP 355 (422)
T ss_dssp HHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSS-------------EEEEECHHHHHHCCCCC
T ss_pred HHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCeee-------------EEEEechhhcccccccc
Confidence 988630 01123889999999999999999999998 45555555544 67776643
Q ss_pred -------h-HHHHHHHHhhCeeeeCCCCCCC------CCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 299 -------D-EDCEKLLRAERIMARGGRRFGA------DAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 299 -------~-~~~~~~l~~~gI~~~pg~~f~~------~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
. +.+..+++++||.+.||+.|+. ..+++|||++.++|++++++++|++++++
T Consensus 356 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 356 GAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp CCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred cccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 2 4455567788999999998852 46899999988999999999999998864
No 15
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=1.9e-38 Score=294.78 Aligned_cols=284 Identities=19% Similarity=0.206 Sum_probs=228.7
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCC-CCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPG-GPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~g-d~~~~~vl~~~p~~~~~~~~ 103 (360)
++|+++. . ++||++++++++. ++++|++|+|++++++.++..++++| |+ |+++.|+|..+...
T Consensus 53 ~~Y~~~~-~-----~~lr~~la~~~~~------~~~~v~~~~G~~~ai~~~~~~~~~~g~d~----Vl~~~p~~~~~~~~ 116 (356)
T 1fg7_A 53 NRYPECQ-P-----KAVIENYAQYAGV------KPEQVLVSRGADEGIELLIRAFCEPGKDA----ILYCPPTYGMYSVS 116 (356)
T ss_dssp TSCCCSS-C-----HHHHHHHHHHHTS------CGGGEEEESHHHHHHHHHHHHHCCTTTCE----EEECSSSCTHHHHH
T ss_pred ccCCCcc-H-----HHHHHHHHHHhCC------ChHHEEEcCCHHHHHHHHHHHHhCCCCCE----EEEeCCChHHHHHH
Confidence 4566543 4 9999999999975 45699999999999999999999999 88 99999999999999
Q ss_pred HHHhCCeeeeecCCcc-cccc-------CCCeeEEEEcCCCCCCcccch-HH---HHHHhhhcCcEEEEeecccCCC---
Q 018172 104 TDYLRSGLYKWDGDAN-TFDK-------NNGAYIEVVNSPNNPDGTIRE-AV---LAKVNRSAEGKLIHDLAYYWPQ--- 168 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~~~-------~~~~~~i~~~~p~NPtG~~~~-~~---~~~~~~~~~~~li~D~ay~~~~--- 168 (360)
++..|++++.++.+.+ .++. + ++++|++++||||||.+++ +. +.++|+ +|+++|+||+|.+..
T Consensus 117 ~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~ 194 (356)
T 1fg7_A 117 AETIGVECRTVPTLDNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQA 194 (356)
T ss_dssp HHHHTCEEEECCCCTTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGG
T ss_pred HHHcCCEEEEeeCCCCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCC
Confidence 9999999998886532 1211 3 7899999999999999998 33 345566 899999999998533
Q ss_pred -CCcCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHH
Q 018172 169 -YTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYG 247 (360)
Q Consensus 169 -~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (360)
...+....++++++.|+||.||++|+|+||+++ ++++++.+..... .++.|.+.|.++.++++. ..+ .++++.
T Consensus 195 ~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~--~~~-~~~~~~ 268 (356)
T 1fg7_A 195 SLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA-NEEVINLLMKVIA--PYPLSTPVADIAAQALSP--QGI-VAMRER 268 (356)
T ss_dssp CSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEE-CHHHHHHHHHHSC--SSCSCHHHHHHHHHHTSH--HHH-HHHHHH
T ss_pred cHHHHHhhCCCEEEEecchHhhcCchhhhEEEEe-CHHHHHHHHHhcC--CCCCCHHHHHHHHHHhcC--ccH-HHHHHH
Confidence 122234567899999999999999999999999 8999999987654 447899999999888872 111 238899
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeC-CCCCCCCCCeE
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARG-GRRFGADAKYA 326 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~p-g~~f~~~~~~~ 326 (360)
++.++++++++.+.|++++++....+ +.++|+|+++++...+.+.|.++||.++| |..|+. ++++
T Consensus 269 ~~~~~~~~~~l~~~L~~~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~g~~~~~-~~~i 334 (356)
T 1fg7_A 269 VAQIIAEREYLIAALKEIPCVEQVFD-------------SETNYILARFKASSAVFKSLWDQGIILRDQNKQPSL-SGCL 334 (356)
T ss_dssp HHHHHHHHHHHHHHHHHSTTEEEECC-------------CSSSEEEEEETTHHHHHHHHHHTTEECEECTTSTTC-TTEE
T ss_pred HHHHHHHHHHHHHHHHhCCCceEECC-------------CCCeEEEEECCCHHHHHHHHHHCCEEEEECCCCCCC-CCeE
Confidence 99999999999999998864322222 33458888887556677777899999999 888875 5699
Q ss_pred EEEecCChHHHHHHHHHHHHH
Q 018172 327 RVSMLSREEIFNIFLERLSAI 347 (360)
Q Consensus 327 R~s~~~~~e~~~~~~~~l~~~ 347 (360)
|+|++ +++++++++++|+++
T Consensus 335 Ris~~-~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 335 RITVG-TREESQRVIDALRAE 354 (356)
T ss_dssp EEECC-CHHHHHHHHHHHHTC
T ss_pred EEEeC-CHHHHHHHHHHHHhh
Confidence 99995 688999999998764
No 16
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3e-38 Score=299.03 Aligned_cols=300 Identities=18% Similarity=0.222 Sum_probs=241.4
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. +++|+++++++.. +|.+++++++|++|+|+++++..++..++++||+ |+++.|+|..+...
T Consensus 69 ~~y~~~~g~-----~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~----Vl~~~p~~~~~~~~ 139 (412)
T 2x5d_A 69 HGYSTSRGI-----PRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDT----ILVPNPSYPIHIYG 139 (412)
T ss_dssp ----CTTCC-----HHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCE----EEEEESCCHHHHHH
T ss_pred CCCCCCCCc-----HHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCE----EEEcCCCchhHHHH
Confidence 357767776 9999999999853 3555554358999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcc-cccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC
Q 018172 104 TDYLRSGLYKWDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY 169 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~ 169 (360)
++..|.+++.++.+.+ ++.. ++++++|++++||||||.+++ +.+.++|+++|+++|+|++|.+..+
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~ 219 (412)
T 2x5d_A 140 AVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVY 219 (412)
T ss_dssp HHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBC
T ss_pred HHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEecccccccc
Confidence 9999999999987754 4311 357899999999999999988 3566788889999999999986432
Q ss_pred -----CcCCC---CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCch
Q 018172 170 -----TPITG---AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 170 -----~~~~~---~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
.++.. ..++++++.|+||.+|++|+|+||+++ ++++++.+.......+++.+.+.|.++.++++.. .
T Consensus 220 ~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~--~-- 294 (412)
T 2x5d_A 220 DGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVG-NPELVSALARIKSYHDYGTFTPLQVAAIAALEGD--Q-- 294 (412)
T ss_dssp TTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEE-CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSC--S--
T ss_pred CCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEc-CHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC--H--
Confidence 22222 246789999999999999999999999 8999999988777677889999999999988732 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC------chHHHHHHH-HhhCeeee
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK------EDEDCEKLL-RAERIMAR 314 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l-~~~gI~~~ 314 (360)
.++++.++.++++++++.+.|+++ ++.+..+.+++ |+|++++ +...+.+.| +++||.++
T Consensus 295 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~ 360 (412)
T 2x5d_A 295 QCVRDIARQYQQRRDVLVKGLREA-GWMVENPKASM-------------YVWAKIPEPYAHLGSLEFAKKLLQDAKVSVS 360 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-TCCCCCCSBSS-------------EEEEECCTTTGGGCHHHHHHHHHHHHCEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CCEecCCCeee-------------EEEEEcCCccCCCCHHHHHHHHHHHCCEEEe
Confidence 789999999999999999999988 45554444333 6777775 234455555 56799999
Q ss_pred CCCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 315 GGRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 315 pg~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
||..|+. .++++|++++.+++++++++++|.+++++.+
T Consensus 361 ~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~~ 399 (412)
T 2x5d_A 361 PGIGFGDYGDDHVRFALIENRDRLRQAVRGIKAMFRADG 399 (412)
T ss_dssp EGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHTT
T ss_pred CchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhcC
Confidence 9998864 4679999998899999999999999997644
No 17
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1.1e-38 Score=302.99 Aligned_cols=300 Identities=14% Similarity=0.134 Sum_probs=238.8
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHH--HHHHHhhcCC---C-------CCCCceEE
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLY--QAALYALSSP---G-------GPEPISVV 91 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l--~~~~~~l~~~---g-------d~~~~~vl 91 (360)
...|+++.|. ++||++++++++. ++++|++|+|+++++ .+++..+.++ | |. .+|+
T Consensus 69 ~~~Y~~~~G~-----~~lr~~ia~~~~~------~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~--~~Vl 135 (422)
T 3d6k_A 69 CRNYGGLLGI-----ADIRELWAEALGL------PADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEK--VKWL 135 (422)
T ss_dssp TTSSCCSSCC-----HHHHHHHHHHHTC------CGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSC--CEEE
T ss_pred hhCCCCCCCC-----HHHHHHHHHHhCC------ChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCC--CEEE
Confidence 4579998888 9999999999975 556999999999997 6777777655 3 21 1399
Q ss_pred EeCCCCCCcHHHHHHhCCeeeeecCCcccccc-------C-CCeeEEE-EcCCCCCCcccchH----HHHHHhh-hcCcE
Q 018172 92 SAAPYYSQYPAETDYLRSGLYKWDGDANTFDK-------N-NGAYIEV-VNSPNNPDGTIREA----VLAKVNR-SAEGK 157 (360)
Q Consensus 92 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~-~~~~~i~-~~~p~NPtG~~~~~----~~~~~~~-~~~~~ 157 (360)
++.|+|..+...++..|++++.++.+.++++. + .++++|+ +++||||||.+++. .+.++|+ ++|++
T Consensus 136 ~~~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~ 215 (422)
T 3d6k_A 136 CPVPGYDRHFTITEHFGFEMINVPMTDEGPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFR 215 (422)
T ss_dssp EEESCCHHHHHHHHHHTCEEEEEEEETTEECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCE
T ss_pred EeCCccHHHHHHHHHcCCEEEecCCCCCCCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCE
Confidence 99999999999999999999999876555432 2 3789888 78999999999983 4556777 79999
Q ss_pred EEEeecccCCC-------CCcC------CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChH
Q 018172 158 LIHDLAYYWPQ-------YTPI------TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKE 224 (360)
Q Consensus 158 li~D~ay~~~~-------~~~~------~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~ 224 (360)
+|+||+|.+.. ..++ .+..++++++.||||. +++|+|+||+++ ++++++.+.......+.+.+.+
T Consensus 216 li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~-~~~l~~~l~~~~~~~~~~~~~~ 293 (422)
T 3d6k_A 216 IVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFAS-SKENIEWYASHANVRGIGPNKL 293 (422)
T ss_dssp EEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEEC-CHHHHHHHHHHHHHHCSCCCHH
T ss_pred EEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEEe-CHHHHHHHHHHHHhhcCCCCHH
Confidence 99999997311 1122 2356789999999998 669999999999 8999999998887777889999
Q ss_pred HHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhc----CCcccCCCCCcccccccccCCCCCCcccccCCc--
Q 018172 225 SQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQS----GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-- 298 (360)
Q Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 298 (360)
+|.++.++++.. +.++.++++.++.++++++.+.+.|.+. +++.+..|.++ +|+|+++++
T Consensus 294 ~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g-------------~~~~~~~~~~~ 359 (422)
T 3d6k_A 294 NQLAHAQFFGDV-AGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGG-------------YFISVDVVPGT 359 (422)
T ss_dssp HHHHHHHHHCSH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBS-------------SCEEEEESTTC
T ss_pred HHHHHHHHHhCc-chHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcc-------------eEEEEECCCCC
Confidence 999999988731 2234788999999999999999888753 33343444444 488888875
Q ss_pred hHHHHHHHHhhCeeeeC-CCCCC--C--CCCeEEEEecC-ChHHHHHHHHHHHHHHhchh
Q 018172 299 DEDCEKLLRAERIMARG-GRRFG--A--DAKYARVSMLS-REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 299 ~~~~~~~l~~~gI~~~p-g~~f~--~--~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~~ 352 (360)
.+.+.++|.++||.++| |..|+ . ..+++|||++. ++|++++++++|++++.+..
T Consensus 360 ~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~ 419 (422)
T 3d6k_A 360 ASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGFATCVLMAA 419 (422)
T ss_dssp HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 36778899999999999 55563 1 36799999984 99999999999999987653
No 18
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=2.2e-38 Score=307.06 Aligned_cols=305 Identities=15% Similarity=0.176 Sum_probs=245.8
Q ss_pred cccccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhc-CCCCCCCceEEEeCCCCCCcH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALS-SPGGPEPISVVSAAPYYSQYP 101 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~-~~gd~~~~~vl~~~p~~~~~~ 101 (360)
...|++..|. +++|++++++++ ..|.++++ ++|++|+|+++++..++..++ ++||. |+++.|+|+.+.
T Consensus 127 ~~~Y~~~~G~-----~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~~gd~----Vlv~~p~y~~~~ 196 (500)
T 3tcm_A 127 TGAYSHSQGI-----HGLRDAIASGIASRDGFPANA-DDIFLTDGASPGVHLMMQLLIRNEKDG----ILVPIPQYPLYS 196 (500)
T ss_dssp SSSCCCTTCC-----HHHHHHHHHHHHHHHSSCCCG-GGEEEESSSHHHHHHHHHHHCCSTTEE----EEEEESCCTHHH
T ss_pred CCCcCCCcCh-----HHHHHHHHHHHHhhcCCCCCc-ccEEEcCCHHHHHHHHHHHHcCCCCCE----EEEeCCCcHhHH
Confidence 4569999998 999999999976 44666655 589999999999999999998 79998 999999999999
Q ss_pred HHHHHhCCeeeeecCCcc---cccc-------CC------CeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEe
Q 018172 102 AETDYLRSGLYKWDGDAN---TFDK-------NN------GAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHD 161 (360)
Q Consensus 102 ~~~~~~g~~~~~~~~~~~---~~~~-------~~------~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D 161 (360)
..++..|++++.++++.+ +++. ++ ++++|++++||||||.+++. .+.++|+++++++|+|
T Consensus 197 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~D 276 (500)
T 3tcm_A 197 ASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLAD 276 (500)
T ss_dssp HHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 999999999999987754 3332 11 68999999999999999982 4556688899999999
Q ss_pred ecccCCCC------CcCC---------CCCCccEEEecccccc-CCCCceEEEEeec--CHHHHHHHHHHHhhccccCCh
Q 018172 162 LAYYWPQY------TPIT---------GAADHDIMLFTLSKCT-GHAGSRIGWALVK--DTEVARKMTRFIELGSIGVSK 223 (360)
Q Consensus 162 ~ay~~~~~------~~~~---------~~~~~~i~~~S~sK~~-~~~G~r~G~~~~~--~~~~~~~l~~~~~~~~~~~~~ 223 (360)
++|.+..+ .++. ....++++++||||.| |++|+|+||+++. ++++++.+.+... ...+.+.
T Consensus 277 eay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~ 355 (500)
T 3tcm_A 277 EVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIAS-VNLCSNI 355 (500)
T ss_dssp CTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHH-TTCCCCH
T ss_pred cCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHh-cccCCCH
Confidence 99985322 1211 1223468899999999 8999999999873 6888898887764 5678899
Q ss_pred HHHHHHHHHhcccCC------CchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccC-
Q 018172 224 ESQLRAAKILGIVSD------DYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLES- 296 (360)
Q Consensus 224 ~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 296 (360)
+.|.++..+++.... .+..++++++++++++++++.+.|++++++.+..+.+++ |+|+++
T Consensus 356 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~-------------~~~~~~~ 422 (500)
T 3tcm_A 356 TGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAM-------------YVFPQIC 422 (500)
T ss_dssp HHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTT-------------EECCEEC
T ss_pred HHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEE-------------EEeeeec
Confidence 999999998873220 134677888899999999999999999888887777776 555433
Q ss_pred -Cc-------------h-HHHHHHHHhhCeeeeCCCCCCC--CCCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 297 -KE-------------D-EDCEKLLRAERIMARGGRRFGA--DAKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 297 -~~-------------~-~~~~~~l~~~gI~~~pg~~f~~--~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
+. . ..+.++|+++||.++||+.|+. ..+++|++++.+++++++++++|.+++++..
T Consensus 423 lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~i~~l~~~~~~~~ 495 (500)
T 3tcm_A 423 LPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFM 495 (500)
T ss_dssp CCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESCSCTTTHHHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 21 1 2356888899999999999974 4568999998889999999999999987654
No 19
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=1e-37 Score=293.00 Aligned_cols=300 Identities=18% Similarity=0.208 Sum_probs=243.7
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhc-CCCCCCCCc-EEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVV-DNAVSDGRH-IVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~~~~~~~-i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
..|++..|. +++|+++++++... |.++++ ++ |++|+|+++++..++..++++||+ |++++|+|..+..
T Consensus 57 ~~y~~~~g~-----~~l~~~la~~~~~~~g~~~~~-~~~v~~~~g~~~a~~~~~~~~~~~gd~----vl~~~~~~~~~~~ 126 (389)
T 1gd9_A 57 THYGPNIGL-----LELREAIAEKLKKQNGIEADP-KTEIMVLLGANQAFLMGLSAFLKDGEE----VLIPTPAFVSYAP 126 (389)
T ss_dssp CSCCCTTCC-----HHHHHHHHHHHHHHHCCCCCT-TTSEEEESSTTHHHHHHHTTTCCTTCE----EEEEESCCTTHHH
T ss_pred CCCCCCCCc-----HHHHHHHHHHHHHHhCCCCCC-CCeEEEcCChHHHHHHHHHHhCCCCCE----EEEcCCCchhHHH
Confidence 357777777 99999999998543 555555 47 999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCCcc-ccc--c-------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC
Q 018172 103 ETDYLRSGLYKWDGDAN-TFD--K-------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ 168 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~~-~~~--~-------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~ 168 (360)
.++..|++++.++.+.+ ++. . ++++++|++++||||||.+++ +.+.++|+++|+++|+|++|.+..
T Consensus 127 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~ 206 (389)
T 1gd9_A 127 AVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFI 206 (389)
T ss_dssp HHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCB
T ss_pred HHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcc
Confidence 99999999999987642 222 1 357899999999999999986 356678888999999999998643
Q ss_pred C-----CcCCC---CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCc
Q 018172 169 Y-----TPITG---AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 169 ~-----~~~~~---~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
+ .++.. ..++++++.|+||.++++|+|+||+++ ++++++.+.......+.+.+.+.|.++.++++....
T Consensus 207 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-- 283 (389)
T 1gd9_A 207 YDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAA-PSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERS-- 283 (389)
T ss_dssp CTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEEC-CHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHH--
T ss_pred cCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEE-CHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCc--
Confidence 2 22222 246789999999999999999999999 799999998877766788999999999888873211
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHH-hhCeeeeC
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLR-AERIMARG 315 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~-~~gI~~~p 315 (360)
..++++.+++++++++++.+.|+++ ++.+..+.+++ |+|++++. ...+.+.|. ++||.++|
T Consensus 284 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~ 349 (389)
T 1gd9_A 284 WKAVEEMRKEYDRRRKLVWKRLNEM-GLPTVKPKGAF-------------YIFPRIRDTGLTSKKFSELMLKEARVAVVP 349 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCBTT-------------EECCBCGGGTCCHHHHHHHHHHHTCEECEE
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCeee-------------EEEEeccCCCCCHHHHHHHHHHhCCEEEeC
Confidence 1388999999999999999999988 55555444433 67777752 255666665 89999999
Q ss_pred CCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 316 GRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 316 g~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
|..|+. .++++||+++.+++++++++++|.+++++.
T Consensus 350 g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~~~~~ 386 (389)
T 1gd9_A 350 GSAFGKAGEGYVRISYATAYEKLEEAMDRMERVLKER 386 (389)
T ss_dssp GGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHHT
T ss_pred chhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 998864 467999999889999999999999998653
No 20
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=1.6e-38 Score=297.20 Aligned_cols=294 Identities=18% Similarity=0.157 Sum_probs=238.4
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. +++|+++++++.. +|.+++++++|++|+|+++++..++..+.++||+ |+++.|+|..+...
T Consensus 57 ~~y~~~~~~-----~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~----vl~~~p~y~~~~~~ 127 (376)
T 2dou_A 57 YGYCLKSCT-----LPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTEPEDL----LLLPEVAYPSYFGA 127 (376)
T ss_dssp SSCCCHHHH-----HHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCE----EEEESSCCHHHHHH
T ss_pred CCCCCCCCC-----HHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhcCCCCE----EEECCCCcHhHHHH
Confidence 456655555 9999999999743 3555554448999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcccc-------cc--CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC--
Q 018172 104 TDYLRSGLYKWDGDANTF-------DK--NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ-- 168 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~~-------~~--~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~-- 168 (360)
++..|.+++.++. .+++ .. ++++++|++++||||||.+++ +.+.++|+++|+++|+|++|.+..
T Consensus 128 ~~~~g~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~ 206 (376)
T 2dou_A 128 ARVASLRTFLIPL-REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYE 206 (376)
T ss_dssp HHHTTCEEEEECB-CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSS
T ss_pred HHHcCCEEEEeeC-CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccC
Confidence 9999999999886 2332 21 246899999999999999988 345678888999999999998532
Q ss_pred --CCcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 169 --YTPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 169 --~~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
..+.. +..++++++.|+||.+|++|+|+||+++ ++++++.+.......+.+.+.+.|.++.++++.. +.+
T Consensus 207 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~ 281 (376)
T 2dou_A 207 GEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALG-SEEALARLERVKGVIDFNQYAGVLRMGVEALKTP----KEV 281 (376)
T ss_dssp SCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEE-CHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSC----HHH
T ss_pred CCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEec-CHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCc----HHH
Confidence 11222 2346789999999999999999999998 8999999988777677788999999999888732 478
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFG 320 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~ 320 (360)
+++.++.++++++++.+.|+++ +.+..+.++ +|+|+++++. ..+.+.|.++||.++||..|+
T Consensus 282 ~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~ 346 (376)
T 2dou_A 282 VRGYARVYRERALGMAEALKGV--LSLLPPRAT-------------MYLWGRLPEGVDDLEFGLRLVERGVALAPGRGFG 346 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT--SEECCCCBS-------------SEEEEECCTTCCHHHHHHHHHHTTEECEEGGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHh--cCccCCCee-------------EEEEEECCCCCCHHHHHHHHHHCCEEEcCchhhC
Confidence 9999999999999999999887 444333333 3678888643 566777777799999999886
Q ss_pred C-CCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 321 A-DAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 321 ~-~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
. .++++|++++.+++++++++++|++++
T Consensus 347 ~~~~~~~Ris~~~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 347 PGGKGFVRIALVRPLEELLEAAKRIREAL 375 (376)
T ss_dssp GGGTTEEEEECCSCHHHHHHHHHHHHHTC
T ss_pred CCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 4 467999999879999999999998865
No 21
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=1.7e-38 Score=303.99 Aligned_cols=297 Identities=19% Similarity=0.208 Sum_probs=238.3
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|++..|. ++||++++++++ +|..+.+ ++|++|+|+++++..+ ..++++||+ |++++|+|..+...+
T Consensus 105 ~~y~~~~g~-----~~lr~~ia~~~~-~g~~~~~-~~i~~t~G~~~al~~~-~~l~~~gd~----Vl~~~p~~~~~~~~~ 172 (449)
T 3qgu_A 105 SGYGAEQGQ-----GALREAVASTFY-GHAGRAA-DEIFISDGSKCDIARI-QMMFGSKPT----VAVQDPSYPVYVDTS 172 (449)
T ss_dssp CCSTTTTCC-----HHHHHHHHHHHH-TTTTCCG-GGEEEESCHHHHHHHH-HHHHCSSSC----EEEEESCCTHHHHHH
T ss_pred CCCCCCCCc-----HHHHHHHHHHHH-cCCCCCH-HHEEEccCHHHHHHHH-HHHhCCCCE----EEEcCCCChhHHHHH
Confidence 468777777 999999999987 6666665 4899999999999998 888899998 999999999999999
Q ss_pred HHhCCe----------eeeecCCcc-ccccC----CCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeeccc
Q 018172 105 DYLRSG----------LYKWDGDAN-TFDKN----NGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYY 165 (360)
Q Consensus 105 ~~~g~~----------~~~~~~~~~-~~~~~----~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~ 165 (360)
+..|.+ ++.++.+.+ ++..+ +++++|++++||||||.+++ +.+.++|+++|+++|+||+|.
T Consensus 173 ~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~ 252 (449)
T 3qgu_A 173 VMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYA 252 (449)
T ss_dssp HHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTG
T ss_pred HHcCCcccccccccceeEEEecccccCCcCChhHcCCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchH
Confidence 999998 888887754 44432 57899999999999999998 345677888999999999999
Q ss_pred CCCC-----CcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHH--------HHHHHHhhccccCChHHHHHH
Q 018172 166 WPQY-----TPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVAR--------KMTRFIELGSIGVSKESQLRA 229 (360)
Q Consensus 166 ~~~~-----~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~--------~l~~~~~~~~~~~~~~~~~~~ 229 (360)
+..+ .++. ...++++++.||||.+|++|+|+||+++ ++++++ .+.........+.+.+.|.++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 331 (449)
T 3qgu_A 253 LYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVV-PKALKYANGEPVHADWNRVMTTCFNGASNIVQAGG 331 (449)
T ss_dssp GGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEEC-CTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHH
T ss_pred hhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEec-CHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHH
Confidence 5221 1221 2356789999999999999999999998 666654 455555556668999999999
Q ss_pred HHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--h-HHHHHHH
Q 018172 230 AKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--D-EDCEKLL 306 (360)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~l 306 (360)
.++++.. ...++++.++.++++++++.+.|+++ ++.+..+.++ +|+|+++++ . +.+..++
T Consensus 332 ~~~l~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~ 394 (449)
T 3qgu_A 332 LACLQPE---GLKEMNAMIKFYKENAQILKTTFTEM-GFSVYGGDDA-------------PYIWVGFPGKPSWDVFAEIL 394 (449)
T ss_dssp HHHTSHH---HHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEESSSS-------------SEEEEECTTSCHHHHHHHHH
T ss_pred HHHHhhc---CHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCe-------------eEEEEECCCCCHHHHHHHHH
Confidence 9888731 12678999999999999999999988 4554444433 378888862 2 4445556
Q ss_pred HhhCeeeeCCCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 307 RAERIMARGGRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 307 ~~~gI~~~pg~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
+++||.++||..|+. .++++|||++.++|++++++++|++++.+.
T Consensus 395 ~~~gI~v~pg~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~ 440 (449)
T 3qgu_A 395 ERCNIVTTPGSGYGPAGEGFVRASAFGSRENILEAVRRFKEAYGKR 440 (449)
T ss_dssp HHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHC--
T ss_pred HHCCEEEecchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 666999999999975 578999998779999999999999999765
No 22
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=1.1e-38 Score=300.57 Aligned_cols=293 Identities=11% Similarity=0.045 Sum_probs=225.7
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCC-CCCCCC-cEEEcCChHHHHHHHHHhhcC--CCCCCCceEEEeCCCCCC
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDN-AVSDGR-HIVIGTGSTQLYQAALYALSS--PGGPEPISVVSAAPYYSQ 99 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~-~~~~~~-~i~~t~G~t~~l~~~~~~l~~--~gd~~~~~vl~~~p~~~~ 99 (360)
...|++..|. ++||+++++++...+. .+.+++ ++++|+|+++++++++..+.+ + |+ |++++|+|+.
T Consensus 65 ~~~Y~~~~G~-----~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~----Vlv~~P~y~~ 134 (405)
T 3k7y_A 65 EKPYLLGNGT-----EDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ET----LYVTNPPYIN 134 (405)
T ss_dssp CCCCCTTSSC-----HHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CE----EEEESSCCHH
T ss_pred CCCCCCCCCc-----HHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CE----EEEeCCCCHh
Confidence 4569999998 9999999998754433 334332 469999999999999999987 8 88 9999999999
Q ss_pred cHHHHHHhCCeeeeecC-Ccc--cccc---------CCCeeEEEEcCC-CCCCcccchH----HHHHHhhhcCcEEEEee
Q 018172 100 YPAETDYLRSGLYKWDG-DAN--TFDK---------NNGAYIEVVNSP-NNPDGTIREA----VLAKVNRSAEGKLIHDL 162 (360)
Q Consensus 100 ~~~~~~~~g~~~~~~~~-~~~--~~~~---------~~~~~~i~~~~p-~NPtG~~~~~----~~~~~~~~~~~~li~D~ 162 (360)
|..+++..|++++.++. +.+ +++. .++++++++++| |||||.++++ .+.++|+++++++|+||
T Consensus 135 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De 214 (405)
T 3k7y_A 135 HVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDI 214 (405)
T ss_dssp HHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEE
T ss_pred HHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEec
Confidence 99999999999999987 332 2222 145678888765 8999999993 45577888999999999
Q ss_pred cccCCCCC-------c---CCCCCCccEEEeccccccCCCCceEEEEee--cCHHHHHHHH----HHHhhccccCChHHH
Q 018172 163 AYYWPQYT-------P---ITGAADHDIMLFTLSKCTGHAGSRIGWALV--KDTEVARKMT----RFIELGSIGVSKESQ 226 (360)
Q Consensus 163 ay~~~~~~-------~---~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~--~~~~~~~~l~----~~~~~~~~~~~~~~~ 226 (360)
+|.+..+. + +....+++++++||||+|+++|+|+||+++ +++++++.+. ........+.+.++|
T Consensus 215 ~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q 294 (405)
T 3k7y_A 215 AYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTN 294 (405)
T ss_dssp SCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHH
T ss_pred CcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHH
Confidence 99853321 1 113457899999999999999999999853 4677665553 333334456778999
Q ss_pred HHHHHHhccc--CCCchhHHHHHHHHHHHHHHHHHHHHH----hcCC---cccCCCCCcccccccccCCCCCCcccccCC
Q 018172 227 LRAAKILGIV--SDDYPNFFEYGRRLMSERWNMLRQVIR----QSGV---FGLPEYPLEYCNFTGKFTNSHPGFAWLESK 297 (360)
Q Consensus 227 ~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (360)
.++.++++.- .+.+.+++++++++++++|+.+.+.|+ +++. +.+..|.|++ |+|++++
T Consensus 295 ~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~-------------f~~~~l~ 361 (405)
T 3k7y_A 295 RILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGL-------------FSFVPLL 361 (405)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSS-------------EEECGGG
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceE-------------EEecCCC
Confidence 9988888731 112346788889999999999999999 7742 4555666665 7888876
Q ss_pred chHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHHhc
Q 018172 298 EDEDCEKLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 298 ~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~ 350 (360)
. +++..+ +++||.+.||. |||++. +++++++++++|++++.+
T Consensus 362 ~-~~~~~L-~~~gV~v~p~~---------Ris~a~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 362 A-KIAEHL-KTHHIYIINNG---------RINVSGITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp G-GGTTTT-TTTTEECCTTS---------EEEGGGCCTTHHHHHHHHHHHHHHC
T ss_pred H-HHHHHH-HHCCEeecCCC---------eEEEeccCHHHHHHHHHHHHHHHhh
Confidence 5 445444 88999999852 999986 899999999999998864
No 23
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-39 Score=305.56 Aligned_cols=298 Identities=16% Similarity=0.230 Sum_probs=240.1
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|++..|. ++||+++++++.. .|..++++ +|++|+|+++++..++..++++||+ |++++|+|..+..
T Consensus 88 ~~~Y~~~~g~-----~~lr~~ia~~l~~~~g~~~~~~-~v~~t~G~~~al~~~~~~l~~~gd~----Vlv~~p~y~~~~~ 157 (447)
T 3b46_A 88 VNQYSPTRGR-----PSLINSLIKLYSPIYNTELKAE-NVTVTTGANEGILSCLMGLLNAGDE----VIVFEPFFDQYIP 157 (447)
T ss_dssp GGSCCCTTCC-----HHHHHHHHHHHTTTTTSCCCGG-GEEEESHHHHHHHHHHHHHCCTTCE----EEEEESCCTTHHH
T ss_pred CCCCCCCCCC-----HHHHHHHHHHHHHhcCCCCChh-hEEEeCCHHHHHHHHHHHHcCCCCE----EEEeCCCchhHHH
Confidence 3568888887 9999999999753 45555554 8999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCCcc-------------cccc-------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEE
Q 018172 103 ETDYLRSGLYKWDGDAN-------------TFDK-------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKL 158 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~~-------------~~~~-------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~l 158 (360)
.++..|++++.++.+.+ .++. ++++++|++++||||||.+++ +.+.++|+++|+++
T Consensus 158 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~l 237 (447)
T 3b46_A 158 NIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVI 237 (447)
T ss_dssp HHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEE
Confidence 99999999998876533 1211 357899999999999999987 35667888899999
Q ss_pred EEeecccCCCC----CcCCC----CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHH
Q 018172 159 IHDLAYYWPQY----TPITG----AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAA 230 (360)
Q Consensus 159 i~D~ay~~~~~----~~~~~----~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 230 (360)
|+||+|.+..+ .++.. ..++++++.|+||.++++|+|+||+++.++++++.+.......+++.+.+.|.++.
T Consensus 238 i~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~ 317 (447)
T 3b46_A 238 ISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACA 317 (447)
T ss_dssp EEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHH
T ss_pred EEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHH
Confidence 99999985322 22221 34789999999999999999999999756899999988776677889999999998
Q ss_pred HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc------------
Q 018172 231 KILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE------------ 298 (360)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 298 (360)
++|+... .+.++++.++.++++++++.+.|+++ ++.+..|.+++ |+|++++.
T Consensus 318 ~aL~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~-------------~~~~~~~~~~~p~~~~~~~~ 381 (447)
T 3b46_A 318 NSINDAL--KIGYFEKMRQEYINKFKIFTSIFDEL-GLPYTAPEGTY-------------FVLVDFSKVKIPEDYPYPEE 381 (447)
T ss_dssp HHHHHHH--HHTHHHHHHHHHHHHHHHHHHHHHHH-TCCEECCSBSS-------------EEEEECTTCCCCTTCCCCGG
T ss_pred HHHhCCc--chHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeE-------------EEEEecccccCccccccccc
Confidence 8887431 13788999999999999999999988 45555555554 56665542
Q ss_pred ------hHHHHH-HHHhhCeeeeCCCCCCCC------CCeEEEEecCChHHHHHHHHHHHHH
Q 018172 299 ------DEDCEK-LLRAERIMARGGRRFGAD------AKYARVSMLSREEIFNIFLERLSAI 347 (360)
Q Consensus 299 ------~~~~~~-~l~~~gI~~~pg~~f~~~------~~~~R~s~~~~~e~~~~~~~~l~~~ 347 (360)
...+.+ +++++||.+.||..|+.. ++++|||++.++|++++++++|.++
T Consensus 382 ~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 382 ILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVERLKLL 443 (447)
T ss_dssp GSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCSCHHHHHHHHHHGGGG
T ss_pred cccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeCCHHHHHHHHHHHHHH
Confidence 234444 555789999999988642 6799999988999999999999873
No 24
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=4.1e-38 Score=297.19 Aligned_cols=300 Identities=16% Similarity=0.183 Sum_probs=245.1
Q ss_pred cccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 26 YLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
.|++..|. .++++++++++.. .|.+++++++|++|+|+++++..++..++++||+ |+++.|+|..+...+
T Consensus 73 ~y~~~~g~-----~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~----vl~~~~~~~~~~~~~ 143 (407)
T 3nra_A 73 AYTEYRGD-----LGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDK----VAIVQPDYFANRKLV 143 (407)
T ss_dssp HSCCTTCC-----HHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCCTTCE----EEEEESCCTHHHHHH
T ss_pred CcCCCCCC-----HHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCCCCCE----EEEcCCcccchHHHH
Confidence 47777776 9999999998754 4666666568999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecCC-------cccccc-------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccC
Q 018172 105 DYLRSGLYKWDGD-------ANTFDK-------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYW 166 (360)
Q Consensus 105 ~~~g~~~~~~~~~-------~~~~~~-------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~ 166 (360)
+..|++++.++.+ ..+++. .+++++|++++||||||.+++ +.+.++|+++|+++|+|++|.+
T Consensus 144 ~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~ 223 (407)
T 3nra_A 144 EFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSR 223 (407)
T ss_dssp HHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred HHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccc
Confidence 9999999998873 112221 247899999999999999998 3566788889999999999985
Q ss_pred CC-----CCcCC----CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccC
Q 018172 167 PQ-----YTPIT----GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVS 237 (360)
Q Consensus 167 ~~-----~~~~~----~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 237 (360)
.. ..++. ...++++++.|+||.++++|+|+||+++ ++++++.+.......+.+.+.+.|.++.++++.
T Consensus 224 ~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~-- 300 (407)
T 3nra_A 224 LRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFG-SRAIIARMEKLQAIVSLRAAGYSQAVLRGWFDE-- 300 (407)
T ss_dssp SBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEE-CHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCC--
T ss_pred cccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEc-CHHHHHHHHHHHhhhccCCChHHHHHHHHHHhc--
Confidence 22 12221 2466789999999999999999999998 899999999888777888888888887777762
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHH-HhhCee
Q 018172 238 DDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLL-RAERIM 312 (360)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l-~~~gI~ 312 (360)
. ..++++.+++++++++++.+.|++++++.+..+.+++ |+|++++. ...+.+.| +++||.
T Consensus 301 ~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~gi~ 365 (407)
T 3nra_A 301 A--PGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGS-------------YLFPRLPKLAVAPAEFVKILRLQAGVV 365 (407)
T ss_dssp C--TTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSS-------------EECCBCCCBSSCHHHHHHHHHHHHCEE
T ss_pred c--chHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeE-------------EEEEeCCCCCCCHHHHHHHHHHhCCEE
Confidence 2 2788899999999999999999998777665555443 77887764 24555555 557999
Q ss_pred eeCCCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 313 ARGGRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 313 ~~pg~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
++||..|+. ..+++|++++.++|++++++++|.+++++.+
T Consensus 366 v~~g~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~~~~~~ 406 (407)
T 3nra_A 366 VTPGTEFSPHTADSVRLNFSQDHEAAVAAARRIVTLVERYR 406 (407)
T ss_dssp CEEGGGTCTTCTTBEEEECCSCHHHHHHHHHHHHHHHHHHB
T ss_pred EeCchhhCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhh
Confidence 999998874 5789999998899999999999999987654
No 25
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=1.2e-37 Score=293.37 Aligned_cols=294 Identities=18% Similarity=0.226 Sum_probs=235.0
Q ss_pred cccccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCC-CCCCceEEEeCCCCCCcH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSSPG-GPEPISVVSAAPYYSQYP 101 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~g-d~~~~~vl~~~p~~~~~~ 101 (360)
...|++..|. +++|++++++++ .+|..+++ ++|++|+|+++++..++..++++| |+ |+++.|+|..+.
T Consensus 69 ~~~y~~~~g~-----~~lr~~la~~l~~~~g~~~~~-~~i~~~~g~~~al~~~~~~l~~~g~d~----vl~~~p~~~~~~ 138 (398)
T 3ele_A 69 LHGYTSAQGD-----VETRAAIAEFLNNTHGTHFNA-DNLYMTMGAAASLSICFRALTSDAYDE----FITIAPYFPEYK 138 (398)
T ss_dssp HHSCCCTTCC-----HHHHHHHHHHHHHHHCCCCCG-GGEEEESSHHHHHHHHHHHHCCSTTCE----EEEESSCCTHHH
T ss_pred cCCcCCCCCc-----HHHHHHHHHHHHHHhCCCCCh-HHEEEccCHHHHHHHHHHHHcCCCCCE----EEEeCCCchhhH
Confidence 3568877887 999999999875 44555555 589999999999999999999999 98 999999999999
Q ss_pred HHHHHhCCeeeeecCCcccccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHhhh------cCcEEEEee
Q 018172 102 AETDYLRSGLYKWDGDANTFDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRS------AEGKLIHDL 162 (360)
Q Consensus 102 ~~~~~~g~~~~~~~~~~~~~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~------~~~~li~D~ 162 (360)
..++..|.+++.++.+.+++.. ++++++|++++||||||.+++. .+.++|++ +|+++|+||
T Consensus 139 ~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De 218 (398)
T 3ele_A 139 VFVNAAGARLVEVPADTEHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADE 218 (398)
T ss_dssp HHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEEC
T ss_pred HHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEec
Confidence 9999999999999887543221 3579999999999999999982 34577887 899999999
Q ss_pred cccCCC-----CCcCCCCCCccEEEeccccccCCCCceEEEEeecCHH------HHHHHHHHHhh-ccccCChHHHHHHH
Q 018172 163 AYYWPQ-----YTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTE------VARKMTRFIEL-GSIGVSKESQLRAA 230 (360)
Q Consensus 163 ay~~~~-----~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~------~~~~l~~~~~~-~~~~~~~~~~~~~~ 230 (360)
+|.+.. .+......++++++.|+||.++++|+|+||+++ +++ +.+.+...... ...+.+.+.|.++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 297 (398)
T 3ele_A 219 PYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLV-PDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIV 297 (398)
T ss_dssp TTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEEC-CTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHT
T ss_pred cccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEE-cchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHH
Confidence 998522 233335667899999999999999999999999 444 44555444333 35677888888887
Q ss_pred HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHh
Q 018172 231 KILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRA 308 (360)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~ 308 (360)
++++. . . .++.++++++++.+.|+++ ++.+..+.+++ |+|++++. ...+.+.|++
T Consensus 298 ~~l~~---~--~----~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~l~~ 354 (398)
T 3ele_A 298 KCQGA---T--G----DINAYKENRDLLYEGLTRI-GYHCFKPDGAF-------------YMFVKALEDDSNAFCEKAKE 354 (398)
T ss_dssp TCTTC---C--C----CHHHHHHHHHHHHHHHHHH-TCCEECCSBSS-------------EEEEECSSSCHHHHHHHHHT
T ss_pred HHhcC---H--H----HHHHHHHHHHHHHHHHHHc-CCeecCCCeeE-------------EEEEEcCCCCHHHHHHHHHH
Confidence 76652 1 1 3677888999999999887 45554454443 68888864 3667778889
Q ss_pred hCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 309 ERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 309 ~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
+||.++||..|+. ++++|++++.++|++++++++|.+++++.+
T Consensus 355 ~gi~v~~g~~~~~-~~~iRis~~~~~e~i~~~l~~l~~~l~~~~ 397 (398)
T 3ele_A 355 EDVLIVAADGFGC-PGWVRISYCVDREMIKHSMPAFEKIYKKYN 397 (398)
T ss_dssp TTEECEESGGGTC-TTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEeCccccCC-CCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 9999999999985 779999998899999999999999987654
No 26
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=2e-38 Score=296.29 Aligned_cols=296 Identities=22% Similarity=0.308 Sum_probs=244.5
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|.+..|. ++||++++++++. + .+++|++|+|+++++..++..++++||+ |+++.|+|..+...+
T Consensus 57 ~~y~~~~g~-----~~l~~~la~~~~~----~-~~~~v~~~~g~~~a~~~~~~~l~~~gd~----Vl~~~~~~~~~~~~~ 122 (375)
T 3op7_A 57 LNYGWIEGS-----PAFKKSVSQLYTG----V-KPEQILQTNGATGANLLVLYSLIEPGDH----VISLYPTYQQLYDIP 122 (375)
T ss_dssp CSSCCTTCC-----HHHHHHHHTTSSS----C-CGGGEEEESHHHHHHHHHHHHHCCTTCE----EEEEESSCTHHHHHH
T ss_pred cCCCCCCCh-----HHHHHHHHHHhcc----C-ChhhEEEcCChHHHHHHHHHHhcCCCCE----EEEeCCCchhHHHHH
Confidence 357777777 9999999998741 1 4468999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecCCc-ccc--c-----c--CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCCC
Q 018172 105 DYLRSGLYKWDGDA-NTF--D-----K--NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQYT 170 (360)
Q Consensus 105 ~~~g~~~~~~~~~~-~~~--~-----~--~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~~ 170 (360)
+..|++++.++.+. +++ + . ++++++|++++||||||.+++ +.+.++|+++|+++|+|++|......
T Consensus 123 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~ 202 (375)
T 3op7_A 123 KSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL 202 (375)
T ss_dssp HHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS
T ss_pred HHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc
Confidence 99999999888653 232 1 1 368999999999999999998 35667888999999999999864332
Q ss_pred ---cCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHH
Q 018172 171 ---PITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYG 247 (360)
Q Consensus 171 ---~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (360)
...+..++++++.||||.++++|+|+||+++ ++++++.+.......+.+.+.+.|.++..+++. .+.++++.
T Consensus 203 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~ 277 (375)
T 3op7_A 203 DVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAA-NHQVTDILRDYRDYTMICAGVFDDLVAQLALAH----YQEILERN 277 (375)
T ss_dssp CCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEEC-CHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHT----HHHHHHHH
T ss_pred CCCchhhhcCCEEEEeEChhhcCCcccceEEEEe-CHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhc----cHHHHHHH
Confidence 2224567889999999999999999999999 999999998888777888899999988888873 24788999
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---h-HHHHHHHHhhCeeeeCCCCCCCCC
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---D-EDCEKLLRAERIMARGGRRFGADA 323 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~l~~~gI~~~pg~~f~~~~ 323 (360)
++.++++++.+.+.|++++++.+..+.+++ ++|+.++. . +.+..+++++||.++||..|+. +
T Consensus 278 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~ 343 (375)
T 3op7_A 278 RHILEENLAILDQWIEEEPLVSYIRPAVVS-------------TSFVKIAVDMPMEDFCLQLLQEHGVLLVPGNRFER-D 343 (375)
T ss_dssp HHHHHHHHHHHHHHHHHCTTEEECCCSSSS-------------CEEEEECCSSCHHHHHHHHHHHHCEECEEGGGGTC-T
T ss_pred HHHHHHHHHHHHHHHhhCCCceEecCCCeE-------------EEeEEcCCCCCHHHHHHHHHHhCCEEEeChhhhCC-C
Confidence 999999999999999998777766666554 34444432 2 4455566899999999999985 7
Q ss_pred CeEEEEecCChHHHHHHHHHHHHHHhchhc
Q 018172 324 KYARVSMLSREEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 324 ~~~R~s~~~~~e~~~~~~~~l~~~~~~~~~ 353 (360)
+++|++++.+.|++++++++|.+++++.++
T Consensus 344 ~~iRi~~~~~~~~i~~~l~~l~~~l~~~~~ 373 (375)
T 3op7_A 344 GYVRLGFACEQETLIKGLEKLSQFLRRFDK 373 (375)
T ss_dssp TEEEECCCSCHHHHHHHHHHHHHHHGGGC-
T ss_pred CeEEEEecCCHHHHHHHHHHHHHHHHHHhh
Confidence 899999988889999999999999987653
No 27
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=7.7e-38 Score=295.72 Aligned_cols=300 Identities=16% Similarity=0.226 Sum_probs=242.6
Q ss_pred cccccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|++..|. +++|++++++++ .++.++.+.++|++|+|+++++..++..++++||+ |+++.|+|..+..
T Consensus 54 ~~~y~~~~g~-----~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~----vl~~~p~~~~~~~ 124 (410)
T 3e2y_A 54 MNQYTRGFGH-----PALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDE----VIIMVPFYDCYEP 124 (410)
T ss_dssp GGSCCCTTCC-----HHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCE----EEEEESCCTTHHH
T ss_pred ccCCCCCCCh-----HHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCE----EEEeCCCchhhHH
Confidence 3468887777 999999999987 35666666468999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCCc-----------------ccccc--CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEE
Q 018172 103 ETDYLRSGLYKWDGDA-----------------NTFDK--NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLI 159 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~-----------------~~~~~--~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li 159 (360)
.++..|.+++.++.+. +.+.. ++++++|++++||||||.+++ +.+.++|+++|+++|
T Consensus 125 ~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li 204 (410)
T 3e2y_A 125 MVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCI 204 (410)
T ss_dssp HHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEE
Confidence 9999999999887652 11211 357999999999999999986 356678888999999
Q ss_pred EeecccCCCC-----Cc---CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHH
Q 018172 160 HDLAYYWPQY-----TP---ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAK 231 (360)
Q Consensus 160 ~D~ay~~~~~-----~~---~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 231 (360)
+|++|.+..+ .+ +....++++++.|+||.+|++|+|+||+++ ++++++.+.......+++.+.+.|.++.+
T Consensus 205 ~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 283 (410)
T 3e2y_A 205 SDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIG-PAHLIKHLQTVQQNSFYTCATPLQAALAE 283 (410)
T ss_dssp EECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEEC-CHHHHHHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred EEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEE-CHHHHHHHHHHHHhhccCCChHHHHHHHH
Confidence 9999985221 12 223457789999999999999999999998 89999999888877788899999999999
Q ss_pred Hhccc---CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----------
Q 018172 232 ILGIV---SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---------- 298 (360)
Q Consensus 232 ~l~~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 298 (360)
+++.. ......++++.++.++++++++.+.|+++ ++.+..+.+++ |+|+++..
T Consensus 284 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~ 349 (410)
T 3e2y_A 284 AFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GLKPIVPDGGY-------------FIIADVSSLGADLSDMNS 349 (410)
T ss_dssp HHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSS-------------EEEEECGGGCCCCTTCCS
T ss_pred HHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCccE-------------EEEEEchhhhcccccccc
Confidence 88620 01223889999999999999999999998 55555555554 55555432
Q ss_pred ----h-HHHHHHHHhhCeeeeCCCCCCC------CCCeEEEEecCChHHHHHHHHHHHHH
Q 018172 299 ----D-EDCEKLLRAERIMARGGRRFGA------DAKYARVSMLSREEIFNIFLERLSAI 347 (360)
Q Consensus 299 ----~-~~~~~~l~~~gI~~~pg~~f~~------~~~~~R~s~~~~~e~~~~~~~~l~~~ 347 (360)
. +.+..+++++||.+.||+.|+. ..+++|||++.++|++++++++|+++
T Consensus 350 ~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~l~~~l~~l~~~ 409 (410)
T 3e2y_A 350 DEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEEIFRAW 409 (410)
T ss_dssp SCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCCCHHHHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHhc
Confidence 1 4455577888999999998864 25899999988999999999999763
No 28
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=1e-37 Score=295.49 Aligned_cols=305 Identities=16% Similarity=0.164 Sum_probs=234.9
Q ss_pred cccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCC-CCCceEEEe-CCCCCCcHH
Q 018172 26 YLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGG-PEPISVVSA-APYYSQYPA 102 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd-~~~~~vl~~-~p~~~~~~~ 102 (360)
.|+++.|. ++||++++++++ .+|..+.+ ++|++|+|+++++++++..++++|| .....|+++ .|+|..+..
T Consensus 70 ~y~~~~g~-----~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~ 143 (417)
T 3g7q_A 70 NYDGPQGK-----TALLNALAVLLRETLGWDIEP-QNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYAD 143 (417)
T ss_dssp STTCTTSH-----HHHHHHHHHHHHHHHCCCCCG-GGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC
T ss_pred ccCCCCCc-----HHHHHHHHHHHHHHhCCCCCc-ccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchh
Confidence 68888887 999999999975 45666665 5899999999999999999999887 111139997 999999887
Q ss_pred HHHHh------CCeeeeec-------CCccccccCCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeeccc
Q 018172 103 ETDYL------RSGLYKWD-------GDANTFDKNNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYY 165 (360)
Q Consensus 103 ~~~~~------g~~~~~~~-------~~~~~~~~~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~ 165 (360)
.+... +..+..++ +|.+.+..++++++|++++||||||.+++ +.+.++|+++|+++|+|++|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~ 223 (417)
T 3g7q_A 144 SGLEDDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYG 223 (417)
T ss_dssp -----CCEEECCCEEEEEGGGEEEEECCGGGCCCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred hccchhhhccccCcccccCCcccccccCHHHhccccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCc
Confidence 65432 33444333 35555555678999999999999999998 355677888999999999998
Q ss_pred CCC----CCc-CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCc
Q 018172 166 WPQ----YTP-ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 166 ~~~----~~~-~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
.+. +.. .....++++++.|||| ++++|+|+||+++ ++++++.+.......+.+.+.+.|.++.++++. ..+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~ 299 (417)
T 3g7q_A 224 VPFPGIIFSEARPLWNPNIILCMSLSK-LGLPGSRCGIIIA-NDKTITAIANMNGIISLAPGGMGPAMMCEMIKR--NDL 299 (417)
T ss_dssp TTTTCCBCSCCCCCCCTTEEEEEESGG-GTCTTSCCEEEEC-CHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHT--TCH
T ss_pred cccccccccccccCCCCCEEEEEechh-ccCCCcceEEEEe-CHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcC--cch
Confidence 521 111 1234678999999999 6889999999998 899999999888877888999999999998873 334
Q ss_pred hhHHHH-HHHHHHHHHHHHHHHHHh-cCC--cccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHHhhCee
Q 018172 241 PNFFEY-GRRLMSERWNMLRQVIRQ-SGV--FGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLRAERIM 312 (360)
Q Consensus 241 ~~~~~~-~~~~~~~~~~~l~~~l~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gI~ 312 (360)
..+..+ +++.++++++.+.+.|.+ ++. +.+..+.++ +|+|++++. .+.+.+.|.++||.
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~l~~~l~~~gi~ 366 (417)
T 3g7q_A 300 LRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGA-------------IFLWLWFKDLPITTELLYQRLKARGVL 366 (417)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBS-------------SEEEEECTTCSSCHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcc-------------eEEEEEcCCCCCCHHHHHHHHHHCCEE
Confidence 455555 788899999999999987 443 333334433 478888764 26777788899999
Q ss_pred eeCCCCCCCC--------CCeEEEEecCChHHHHHHHHHHHHHHhchhc
Q 018172 313 ARGGRRFGAD--------AKYARVSMLSREEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 313 ~~pg~~f~~~--------~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~~ 353 (360)
++||..|+.. ++++|||++.++|++++++++|.+++.+..+
T Consensus 367 v~~g~~f~~~~~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~l~~~~~ 415 (417)
T 3g7q_A 367 MVPGHYFFPGLDKPWPHTHQCMRMNYVPEPDKIEAGVKILAEEIERAWR 415 (417)
T ss_dssp CEEGGGGCTTBSSCCGGGGGEEEEESCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EECchhhCCCCccccccCCCeEEEEecCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999988642 4699999988999999999999999987643
No 29
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=3.6e-37 Score=289.10 Aligned_cols=297 Identities=18% Similarity=0.229 Sum_probs=242.6
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. +++|++++++++. +|.++.+ ++|++|+|+++++..++..++++||+ |++++|+|..+...
T Consensus 61 ~~y~~~~g~-----~~l~~~la~~~~~~~g~~~~~-~~v~~~~g~~~a~~~~~~~~~~~gd~----vl~~~~~~~~~~~~ 130 (388)
T 1j32_A 61 TRYGPAAGE-----PRLREAIAQKLQRDNGLCYGA-DNILVTNGGKQSIFNLMLAMIEPGDE----VIIPAPFWVSYPEM 130 (388)
T ss_dssp CSCCCTTCC-----HHHHHHHHHHHHHHHCCCCCG-GGEEEESHHHHHHHHHHHHHCCTTCE----EEEESSCCTHHHHH
T ss_pred CCCCCCCCC-----HHHHHHHHHHHHHhcCCCCCh-hhEEEcCCHHHHHHHHHHHhcCCCCE----EEEcCCCChhHHHH
Confidence 458877777 9999999999863 3555554 58999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCcc-cc--cc-------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC
Q 018172 104 TDYLRSGLYKWDGDAN-TF--DK-------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY 169 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~--~~-------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~ 169 (360)
++..|.+++.++.+.+ ++ +. ++++++|++++||||||.+++ +.+.++|+++|+++|+|++|.+..+
T Consensus 131 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 210 (388)
T 1j32_A 131 VKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILY 210 (388)
T ss_dssp HHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBC
T ss_pred HHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhccc
Confidence 9999999999987642 22 11 357899999999999999987 3566788889999999999985322
Q ss_pred -----CcCCCC----CCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCc
Q 018172 170 -----TPITGA----ADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 170 -----~~~~~~----~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
.++... .++++++.|+||.++++|+|+||+++ ++++++.+.......+.+.+.+.|.++.++++. .
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~--~-- 285 (388)
T 1j32_A 211 DDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAG-PVPLVKAATKIQGHSTSNVCTFAQYGAIAAYEN--S-- 285 (388)
T ss_dssp TTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEEC-CHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHS--C--
T ss_pred CCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEe-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC--C--
Confidence 122211 45789999999999999999999998 899999998887777788999999988888873 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHH-hhCeeeeC
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLR-AERIMARG 315 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~-~~gI~~~p 315 (360)
..++++.+++++++++++.+.|++++++.+..+.+++ |+|++++. ...+.+.|. ++||.++|
T Consensus 286 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~ 352 (388)
T 1j32_A 286 QDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAF-------------YMFPSIAKTGRSSLDFCSELLDQHQVATVP 352 (388)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTT-------------EECCBCGGGTCCHHHHHHHHHHHHCEECEE
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCeeE-------------EEEEecCCCCCCHHHHHHHHHHhCCEEEeC
Confidence 2789999999999999999999998666665555443 56666642 355555555 57999999
Q ss_pred CCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 316 GRRFGADAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 316 g~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
|..|+. ++++|+|++.++|++++++++|.+++++
T Consensus 353 g~~~~~-~~~iRis~~~~~~~i~~~~~~l~~~l~~ 386 (388)
T 1j32_A 353 GAAFGA-DDCIRLSYATDLDTIKRGMERLEKFLHG 386 (388)
T ss_dssp GGGGTC-TTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred hhhhCC-CCcEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 998875 6799999988999999999999998864
No 30
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.7e-37 Score=290.36 Aligned_cols=292 Identities=20% Similarity=0.276 Sum_probs=238.9
Q ss_pred cccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 26 YLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
.|++..|. +++|++++++++. +|.++.+ ++|++|+|+++++..++..++++||+ |++++|+|..+...+
T Consensus 73 ~y~~~~g~-----~~lr~~la~~~~~~~g~~~~~-~~v~~~~g~t~al~~~~~~l~~~gd~----Vl~~~~~~~~~~~~~ 142 (389)
T 1o4s_A 73 KYTDPRGI-----YELREGIAKRIGERYKKDISP-DQVVVTNGAKQALFNAFMALLDPGDE----VIVFSPVWVSYIPQI 142 (389)
T ss_dssp CCCCTTCC-----HHHHHHHHHHHHHHHTCCCCG-GGEEEESHHHHHHHHHHHHHCCTTCE----EEEEESCCTTHHHHH
T ss_pred CCCCCCCC-----HHHHHHHHHHHHHHhCCCCCH-HHEEEecCHHHHHHHHHHHhCCCCCE----EEEcCCCchhHHHHH
Confidence 57776776 9999999999864 3555555 58999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecCCcc-cccc---------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCCC
Q 018172 105 DYLRSGLYKWDGDAN-TFDK---------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQYT 170 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~-~~~~---------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~~ 170 (360)
+..|++++.++.+.+ ++.. ++++++|++++||||||.+++ +.+.++|+++|+++|+|++|.+..+.
T Consensus 143 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~ 222 (389)
T 1o4s_A 143 ILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYT 222 (389)
T ss_dssp HHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCS
T ss_pred HHcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccC
Confidence 999999999987642 2211 357899999999999999987 35667888899999999999864331
Q ss_pred ----cCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 171 ----PIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 171 ----~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
++. ...++++++.|+||.++++|+|+||+++ ++++++.+.......+.+.+.+.|.++.++++. .
T Consensus 223 g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~------~- 294 (389)
T 1o4s_A 223 DEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLIS-SEKVATAVSKIQSHTTSCINTVAQYAALKALEV------D- 294 (389)
T ss_dssp SCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEEC-CHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTC------C-
T ss_pred CCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEe-CHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhc------c-
Confidence 111 1257899999999999999999999999 899999998877766788899999988887762 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-chHHHHHHHH-hhCeeeeCCCCCCC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-EDEDCEKLLR-AERIMARGGRRFGA 321 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~-~~gI~~~pg~~f~~ 321 (360)
+++.++.++++++++.+.|+++ ++.+..+.+++ |+|++++ +...+.+.|. ++||.++||..|+.
T Consensus 295 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-------------~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~ 360 (389)
T 1o4s_A 295 NSYMVQTFKERKNFVVERLKKM-GVKFVEPEGAF-------------YLFFKVRGDDVKFCERLLEEKKVALVPGSAFLK 360 (389)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSBSS-------------EEEEECSSCHHHHHHHHHHHHCEECEEGGGGTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCeeecCCcce-------------EEEEeCCCCHHHHHHHHHHHCCEEEeCchhcCC
Confidence 6788899999999999999988 55554444433 6777774 4455666664 89999999998875
Q ss_pred CCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 322 DAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 322 ~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
++++|+|++.+++++++++++|.+++++
T Consensus 361 -~~~~Ris~~~~~~~l~~~l~~l~~~l~~ 388 (389)
T 1o4s_A 361 -PGFVRLSFATSIERLTEALDRIEDFLNS 388 (389)
T ss_dssp -TTEEEEECCSCHHHHHHHHHHHHHHHTC
T ss_pred -CCeEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 6799999988999999999999998854
No 31
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=6.7e-38 Score=297.85 Aligned_cols=303 Identities=17% Similarity=0.161 Sum_probs=243.8
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhc-CCC-CCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVV-DNA-VSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~-~~~-~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
..|++..|. +++|+++++++..+ |.+ +.+ ++|++|+|+++++..++..++++||+ |+++.|+|..+..
T Consensus 79 ~~y~~~~g~-----~~lr~~la~~l~~~~g~~~~~~-~~v~~t~G~~~al~~~~~~l~~~gd~----Vl~~~p~y~~~~~ 148 (425)
T 1vp4_A 79 LQYSTTEGD-----PVLKQQILKLLERMYGITGLDE-DNLIFTVGSQQALDLIGKLFLDDESY----CVLDDPAYLGAIN 148 (425)
T ss_dssp TSCCCTTCC-----HHHHHHHHHHHHHHHCCCSCCG-GGEEEEEHHHHHHHHHHHHHCCTTCE----EEEEESCCHHHHH
T ss_pred cCCCCCCCC-----HHHHHHHHHHHHhccCCCCCCc-ccEEEeccHHHHHHHHHHHhCCCCCE----EEEeCCCcHHHHH
Confidence 467777777 99999999998544 544 444 58999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCCcccccc-------C--------CCeeEE-EEcCCCCCCcccchH----HHHHHhhhcCcEEEEee
Q 018172 103 ETDYLRSGLYKWDGDANTFDK-------N--------NGAYIE-VVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDL 162 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~~~~~~-------~--------~~~~~i-~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ 162 (360)
.++..|++++.++.+.++++. + .++++| ++++||||||.+++. .+.++|+++|+++|+||
T Consensus 149 ~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De 228 (425)
T 1vp4_A 149 AFRQYLANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDD 228 (425)
T ss_dssp HHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHcCCEEEEeccCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEC
Confidence 999999999988865443322 1 268888 579999999999983 56678888999999999
Q ss_pred cccCCCC-----CcCC--CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcc
Q 018172 163 AYYWPQY-----TPIT--GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGI 235 (360)
Q Consensus 163 ay~~~~~-----~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (360)
+|.+..+ .++. +..++++++.|+||.++ +|+|+||+++ ++++++.+.......+++.|.+.|.++.++++.
T Consensus 229 ~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 306 (425)
T 1vp4_A 229 PYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAG-SKEFIRKIVQAKQSADLCSPAITHRLAARYLER 306 (425)
T ss_dssp SSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEEC-CHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred CCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccceEEEee-CHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhc
Confidence 9986322 1221 23467899999999999 9999999999 799999998877666778899999999998874
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHhc-C---CcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHh
Q 018172 236 VSDDYPNFFEYGRRLMSERWNMLRQVIRQS-G---VFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRA 308 (360)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~ 308 (360)
. .++.++++.++.++++++++.+.|+++ + ++.+..|.+ ++|+|+++++ ...+.+.|.+
T Consensus 307 ~--~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~-------------g~~~~~~~~~~~~~~~l~~~l~~ 371 (425)
T 1vp4_A 307 Y--DLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEG-------------GLFIWLTLPEGFDTWEMFEYAKR 371 (425)
T ss_dssp S--CHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSB-------------SSEEEEECCTTCCTTTTHHHHHH
T ss_pred C--CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCc-------------cEEEEEEcCCCCCHHHHHHHHHH
Confidence 2 334788999999999999999999875 3 344443433 3478888874 2556666777
Q ss_pred hCeeeeCCCCCCC---CCCeEEEEecC-ChHHHHHHHHHHHHHHhchhcc
Q 018172 309 ERIMARGGRRFGA---DAKYARVSMLS-REEIFNIFLERLSAIQGGSISN 354 (360)
Q Consensus 309 ~gI~~~pg~~f~~---~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~~~~ 354 (360)
+||.++||..|+. .++++|||++. +++++++++++|.+++.+..++
T Consensus 372 ~gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~~~l~~~~~~ 421 (425)
T 1vp4_A 372 KKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYGKE 421 (425)
T ss_dssp HTEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 7999999998853 36799999987 7999999999999999775543
No 32
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=1e-37 Score=297.13 Aligned_cols=294 Identities=17% Similarity=0.227 Sum_probs=232.3
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|++..|. ++||+++++++. ++..+.+ ++|++|+|+++++..+ ..++++||. |++++|+|.++...+
T Consensus 92 ~~y~~~~g~-----~~l~~~ia~~~~-~~~~~~~-~~i~~t~G~~~al~~l-~~l~~~gd~----Vl~~~p~y~~~~~~~ 159 (432)
T 3ei9_A 92 SGYGAEQGA-----KPLRAAIAKTFY-GGLGIGD-DDVFVSDGAKCDISRL-QVMFGSNVT----IAVQDPSYPAYVDSS 159 (432)
T ss_dssp CCCCCTTCC-----HHHHHHHHHHHH-TTTTCCG-GGEEEESCHHHHHHHH-HHHHCTTCC----EEEEESCCTHHHHHH
T ss_pred cCCCCCCCC-----HHHHHHHHHHHH-ccCCCCc-ceEEECCChHHHHHHH-HHHcCCCCE----EEEeCCCCHHHHHHH
Confidence 357777777 999999999985 3444444 5899999999999874 777889998 999999999999999
Q ss_pred HHhCC------------eeeeecCCcc-ccc----cCCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeec
Q 018172 105 DYLRS------------GLYKWDGDAN-TFD----KNNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLA 163 (360)
Q Consensus 105 ~~~g~------------~~~~~~~~~~-~~~----~~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~a 163 (360)
+..|. +++.++.+.+ ++. ..+++++|++++||||||.+++ +.+.++|+++|+++|+||+
T Consensus 160 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea 239 (432)
T 3ei9_A 160 VIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSA 239 (432)
T ss_dssp HHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred HHcCCcccccccccccCceEEeccCcccCCcCChhhCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccc
Confidence 98884 5677776643 232 2467899999999999999998 2455678889999999999
Q ss_pred ccCCCC----CcC---CCCCCccEEEeccccccCCCCceEEEEeecCHHH--------HHHHHHHHhhccccCChHHHHH
Q 018172 164 YYWPQY----TPI---TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEV--------ARKMTRFIELGSIGVSKESQLR 228 (360)
Q Consensus 164 y~~~~~----~~~---~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~--------~~~l~~~~~~~~~~~~~~~~~~ 228 (360)
|.+..+ .++ .+..++++++.||||+||++|+|+||+++ ++++ .+.+.+.......+.+.++|.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 318 (432)
T 3ei9_A 240 YAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVI-PKKLLYSDGFPVAKDFNRIICTCFNGASNISQAG 318 (432)
T ss_dssp TGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEEC-CTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHH
T ss_pred hHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEE-ChHHhhcchHHHHHHHHHHhccccCCCCHHHHHH
Confidence 994311 122 22346789999999999999999999999 5665 7778777666667789999999
Q ss_pred HHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--h-HHHHHH
Q 018172 229 AAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--D-EDCEKL 305 (360)
Q Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~ 305 (360)
+.+++.. ....++++.++.++++++++.+.|+++ ++.+..+.++ +|+|+++++ . +.+..+
T Consensus 319 ~~~~l~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l 381 (432)
T 3ei9_A 319 ALACLTP---EGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVYGGKNA-------------PYVWVHFPNQSSWDVFAEI 381 (432)
T ss_dssp HHHHSSH---HHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEECSSS-------------SEEEEECTTSCHHHHHHHH
T ss_pred HHHHHhc---ccHHHHHHHHHHHHHHHHHHHHHHHHC-CceecCCCcc-------------eEEEEECCCCCHHHHHHHH
Confidence 8887762 112678999999999999999999988 4444433333 378888873 2 455666
Q ss_pred HHhhCeeeeCCCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 306 LRAERIMARGGRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 306 l~~~gI~~~pg~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
++++||.++||..|+. .++++|||++.++|++++++++|++--
T Consensus 382 l~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~rl~~~~ 425 (432)
T 3ei9_A 382 LEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQLY 425 (432)
T ss_dssp HHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred HHHCCEEEeCchHhCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 6677999999999975 578999999789999999999998754
No 33
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=1.7e-37 Score=294.69 Aligned_cols=300 Identities=17% Similarity=0.192 Sum_probs=243.0
Q ss_pred ccccc-cCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHH--HHHHhhcC--CC---------CCCCc
Q 018172 23 LMSYL-SDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQ--AALYALSS--PG---------GPEPI 88 (360)
Q Consensus 23 ~~~~y-~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~--~~~~~l~~--~g---------d~~~~ 88 (360)
....| ++..|. ++||++++++++. ++++|++|+|++++++ +++..+++ +| |+
T Consensus 61 ~~~~Yp~~~~g~-----~~lr~~ia~~~~~------~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~--- 126 (423)
T 3ez1_A 61 DLRNYPGGVAGL-----PSARALFAGYLDV------KAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPK--- 126 (423)
T ss_dssp ETTSSCSCTTCC-----HHHHHHHHHHTTS------CGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCE---
T ss_pred hhhCCCCCCCCh-----HHHHHHHHHHhCC------ChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCE---
Confidence 34678 788887 9999999999975 5569999999999998 88888887 74 66
Q ss_pred eEEEeCCCCCCcHHHHHHhCCeeeeecCCcccccc---------CCCeeEEEE-cCCCCCCcccchH----HHHHHh-hh
Q 018172 89 SVVSAAPYYSQYPAETDYLRSGLYKWDGDANTFDK---------NNGAYIEVV-NSPNNPDGTIREA----VLAKVN-RS 153 (360)
Q Consensus 89 ~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~---------~~~~~~i~~-~~p~NPtG~~~~~----~~~~~~-~~ 153 (360)
|+++.|+|..+...++..|++++.++.+.++++. ++++++|++ ++||||||.+++. .+.++| ++
T Consensus 127 -Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~ 205 (423)
T 3ez1_A 127 -MIVTVPGYDRHFLLLQTLGFELLTVDMQSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAA 205 (423)
T ss_dssp -EEEEESCCHHHHHHHHHHTCEEEEEEEETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSS
T ss_pred -EEEcCCCcHHHHHHHHHcCCEEEeccCCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999876554432 467899865 5899999999993 455677 78
Q ss_pred cCcEEEEeecccCCCCC--------cCC------CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccc
Q 018172 154 AEGKLIHDLAYYWPQYT--------PIT------GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSI 219 (360)
Q Consensus 154 ~~~~li~D~ay~~~~~~--------~~~------~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~ 219 (360)
+|+++|+||+|....+. +.. +..++++++.||||. +++|+|+||+++ ++++++.+.......+.
T Consensus 206 ~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~ 283 (423)
T 3ez1_A 206 PDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKI-TFAGAGLGFVAS-SEDNIRWLSKYLGAQSI 283 (423)
T ss_dssp TTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTT-SCSSSSCEEEEE-CHHHHHHHHHHHHHSCS
T ss_pred cCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhh-ccCCcceEEEEe-CHHHHHHHHHHHhhhcc
Confidence 99999999999842111 111 356789999999998 569999999999 89999999988887888
Q ss_pred cCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHh-cC----CcccCCCCCcccccccccCCCCCCcccc
Q 018172 220 GVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQ-SG----VFGLPEYPLEYCNFTGKFTNSHPGFAWL 294 (360)
Q Consensus 220 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (360)
+.+.+.|.++.++++.....+..++++.++.++++++.+.+.|.+ ++ ++.+..|.++ +|+|+
T Consensus 284 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g-------------~~~~~ 350 (423)
T 3ez1_A 284 GPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGG-------------YFISL 350 (423)
T ss_dssp CCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBS-------------SCEEE
T ss_pred CCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCcc-------------EEEEE
Confidence 999999999999888422344578889999999999998888865 22 2444444444 48888
Q ss_pred cCCc--hHHHHHHHHhhCeeeeC-CCCCCC----CCCeEEEEecC-ChHHHHHHHHHHHHHHhchh
Q 018172 295 ESKE--DEDCEKLLRAERIMARG-GRRFGA----DAKYARVSMLS-REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 295 ~~~~--~~~~~~~l~~~gI~~~p-g~~f~~----~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~~ 352 (360)
++++ .+.+.+.|+++||.++| |..|+. .++++|||++. +++++++++++|.+++.+..
T Consensus 351 ~~~~~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~ 416 (423)
T 3ez1_A 351 DTAEPVADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVVAACIRLAT 416 (423)
T ss_dssp EESSSCHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCcHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 8874 37788899999999999 777752 46899999976 99999999999999997653
No 34
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=3.1e-37 Score=289.42 Aligned_cols=294 Identities=18% Similarity=0.242 Sum_probs=237.9
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. +++|+++++++.. .|.+++++.+|++|+|+++++..++..++++||+ |+++.|+|+.+...
T Consensus 61 ~~y~~~~g~-----~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~----vl~~~p~~~~~~~~ 131 (386)
T 1u08_A 61 NQYAPMTGV-----QALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDE----VICFDPSYDSYAPA 131 (386)
T ss_dssp CSCCCTTCC-----HHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCE----EEEEESCCTTHHHH
T ss_pred cCCCCCCCC-----HHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCE----EEEeCCCchhHHHH
Confidence 468777777 9999999999753 3544444228999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCccc--ccc-------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC-
Q 018172 104 TDYLRSGLYKWDGDANT--FDK-------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY- 169 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~--~~~-------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~- 169 (360)
++..|.+++.++.+.+. ++. ++++++|++++||||||.+++ +.+.++|+++|+++|+|++|.+..+
T Consensus 132 ~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~ 211 (386)
T 1u08_A 132 IALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFS 211 (386)
T ss_dssp HHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCC
T ss_pred HHHcCCEEEEeecCcccCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccC
Confidence 99999999998876432 211 367899999999999999997 4566788889999999999985221
Q ss_pred ----CcCCC---CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchh
Q 018172 170 ----TPITG---AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 170 ----~~~~~---~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
.++.. ..++++++.|+||.++++|+|+||+++ ++++++.+.......+++.+.+.|.++.++++.. +.
T Consensus 212 g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~----~~ 286 (386)
T 1u08_A 212 QQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVA-PAPISAEIRKVHQYLTFSVNTPAQLALADMLRAE----PE 286 (386)
T ss_dssp SSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEEC-CHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC----TH
T ss_pred CCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEc-CHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCC----cH
Confidence 22222 357899999999999999999999999 8999999988776667888999999998888743 27
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-----hHHHHH-HHHhhCeeeeCC
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-----DEDCEK-LLRAERIMARGG 316 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~l~~~gI~~~pg 316 (360)
++++.++.++++++++.+.|+++ ++.+..+.++ +|+|+++++ ...+.+ +++++||.++||
T Consensus 287 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g-------------~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 352 (386)
T 1u08_A 287 HYLALPDFYRQKRDILVNALNES-RLEILPCEGT-------------YFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPL 352 (386)
T ss_dssp HHHTHHHHHHHHHHHHHHHTTSS-SCEECCCCBS-------------SEEEEECTTTCCSCHHHHHHHHHHHSCEECEEG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCce-------------EEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCc
Confidence 89999999999999999999887 4555444433 377887763 344555 445789999999
Q ss_pred CCCCC---CCCeEEEEecCChHHHHHHHHHHHH
Q 018172 317 RRFGA---DAKYARVSMLSREEIFNIFLERLSA 346 (360)
Q Consensus 317 ~~f~~---~~~~~R~s~~~~~e~~~~~~~~l~~ 346 (360)
..|+. .++++|||++.++|++++++++|++
T Consensus 353 ~~f~~~~~~~~~iRis~~~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 353 SVFCADPFPHKLIRLCFAKKESTLLAAAERLRQ 385 (386)
T ss_dssp GGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred hHhCCCCCCCCEEEEEEcCCHHHHHHHHHHHhh
Confidence 88853 4679999998899999999999864
No 35
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=7.9e-38 Score=292.29 Aligned_cols=290 Identities=13% Similarity=0.159 Sum_probs=239.4
Q ss_pred HHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 39 PELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 39 ~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
+++|++++++++ .++.++.+ ++|++|+|++++++.++..++++||+ |+++.|+|..+...++..|.+++.++.+
T Consensus 61 ~~lr~~la~~~~~~~~~~~~~-~~i~~t~g~~~a~~~~~~~~~~~gd~----vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 135 (377)
T 3fdb_A 61 SLLSQATAEFYADRYGYQARP-EWIFPIPDVVRGLYIAIDHFTPAQSK----VIVPTPAYPPFFHLLSATQREGIFIDAT 135 (377)
T ss_dssp CCHHHHHHHHHHHHHCCCCCG-GGEEEESCHHHHHHHHHHHHSCTTCC----EEEEESCCTHHHHHHHHHTCCEEEEECT
T ss_pred HHHHHHHHHHHHHHhCCCCCH-HHEEEeCChHHHHHHHHHHhcCCCCE----EEEcCCCcHhHHHHHHHcCCEEEEccCC
Confidence 699999999987 44555544 58999999999999999999999998 9999999999999999999999999876
Q ss_pred cccccc-------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC------CCcCCC--CCCc
Q 018172 118 ANTFDK-------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ------YTPITG--AADH 178 (360)
Q Consensus 118 ~~~~~~-------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~------~~~~~~--~~~~ 178 (360)
.+ ++. +++++++++++||||||.+++ +.+.++|+++|+++|+|++|.+.. ..++.. ..++
T Consensus 136 ~~-~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 214 (377)
T 3fdb_A 136 GG-INLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASV 214 (377)
T ss_dssp TS-CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHH
T ss_pred CC-CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCc
Confidence 44 322 346899999999999999987 245567888999999999998522 122222 2467
Q ss_pred cEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 179 DIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 179 ~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
++++.|+||.+|++|+|+||+++.++++++.+.......+.+.+.+.|.++.++++.. ..++++.++.++++++++
T Consensus 215 ~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~~l 290 (377)
T 3fdb_A 215 CITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYG----TDFLNQEVAYLKNNHDFL 290 (377)
T ss_dssp EEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999988767899999988776667889999999988888732 378999999999999999
Q ss_pred HHHHHh-cCCcccCCCCCcccccccccCCCCCCcccccCCch----HHHHHHHHhhCeeeeCCCCCCC-CCCeEEEEecC
Q 018172 259 RQVIRQ-SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED----EDCEKLLRAERIMARGGRRFGA-DAKYARVSMLS 332 (360)
Q Consensus 259 ~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~gI~~~pg~~f~~-~~~~~R~s~~~ 332 (360)
.+.|++ ++++.+..+.+++ ++|++++.. +.+..+++++||.++||..|+. .++++|+|++.
T Consensus 291 ~~~L~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~ 357 (377)
T 3fdb_A 291 LHEIPKRIPGAKITPMQATY-------------LMWIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT 357 (377)
T ss_dssp HHHHHHHSTTCEECCCSBCS-------------EEEEECTTSCCCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS
T ss_pred HHHHHhhCCCceEecCCeeE-------------EEEEECcccCCCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC
Confidence 999988 6666666555544 557777642 5566666667999999998875 47899999988
Q ss_pred ChHHHHHHHHHHHHHHhch
Q 018172 333 REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 333 ~~e~~~~~~~~l~~~~~~~ 351 (360)
++|++++++++|.+++.+.
T Consensus 358 ~~e~i~~~l~~l~~~l~~~ 376 (377)
T 3fdb_A 358 SREVLEEAIDRMAKAVSHH 376 (377)
T ss_dssp CHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHhhc
Confidence 9999999999999998753
No 36
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=1.6e-37 Score=290.86 Aligned_cols=296 Identities=20% Similarity=0.255 Sum_probs=240.2
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
+.|++..|. ++||++++++++. ++++|++|+|+++++..++..++++||+ |++++|+|..+...+
T Consensus 55 ~~y~~~~~~-----~~l~~~la~~~~~------~~~~v~~~~g~~~a~~~~~~~~~~~gd~----Vl~~~~~~~~~~~~~ 119 (381)
T 1v2d_A 55 DQYAPPAGL-----PALREALAEEFAV------EPESVVVTSGATEALYVLLQSLVGPGDE----VVVLEPFFDVYLPDA 119 (381)
T ss_dssp CSCCCTTCC-----HHHHHHHHHHHTS------CGGGEEEESSHHHHHHHHHHHHCCTTCE----EEEEESCCTTHHHHH
T ss_pred cCCCCCCCC-----HHHHHHHHHhcCC------ChhhEEEcCChHHHHHHHHHHhCCCCCE----EEEcCCCchhHHHHH
Confidence 468877776 9999999999885 4568999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecCC--cc-------cccc--CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC
Q 018172 105 DYLRSGLYKWDGD--AN-------TFDK--NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY 169 (360)
Q Consensus 105 ~~~g~~~~~~~~~--~~-------~~~~--~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~ 169 (360)
+..|++++.++.+ .+ .+.. ++++++|++++||||||.+++ +.+.++|+++|+++|+|++|.+..+
T Consensus 120 ~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 199 (381)
T 1v2d_A 120 FLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY 199 (381)
T ss_dssp HHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS
T ss_pred HHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc
Confidence 9999999988875 12 2211 357899999999999999987 3566788889999999999985422
Q ss_pred ----CcCCC-CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHH
Q 018172 170 ----TPITG-AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFF 244 (360)
Q Consensus 170 ----~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 244 (360)
.++.. ..++++++.|+||.++++|+|+||+++ ++++++.+.......+++.+.+.|.++.++++... ++.++
T Consensus 200 g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~ 276 (381)
T 1v2d_A 200 GERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVG-PKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLAR--REGFY 276 (381)
T ss_dssp SSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEEC-CTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHH--HTTHH
T ss_pred CCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEe-CHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcc--cHHHH
Confidence 11111 457899999999999999999999999 78888988877766678889999999988887431 12788
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCC---
Q 018172 245 EYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGA--- 321 (360)
Q Consensus 245 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~--- 321 (360)
++.+++++++++++.+.|++. ++.+..+.++ +|+|+++++.+ +.++|.++||.++||..|+.
T Consensus 277 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-------------~~~~~~~~~~~-~~~~l~~~gi~v~~g~~~~~~~~ 341 (381)
T 1v2d_A 277 EALREGYRRRRDLLAGGLRAM-GLRVYVPEGT-------------YFLMAELPGWD-AFRLVEEARVALIPASAFYLEDP 341 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCEECCSBS-------------SEEEEECTTCC-HHHHHHHTCEECEEGGGGCSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCEecCCCcc-------------eEEEEecChHh-HHHHHHhCCEEEecchHhCCCCC
Confidence 999999999999999999986 4554444333 37788876534 78888999999999998864
Q ss_pred CCCeEEEEecCChHHHHHHHHHHHHHHhchhc
Q 018172 322 DAKYARVSMLSREEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 322 ~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~~ 353 (360)
..+++|++++.++|++++++++|.+++++.+.
T Consensus 342 ~~~~iRi~~~~~~~~i~~~~~~l~~~l~~~r~ 373 (381)
T 1v2d_A 342 PKDLFRFAFCKTEEELHLALERLGRVVNSPRE 373 (381)
T ss_dssp CTTEEEEECCSCHHHHHHHHHHHHHHC-----
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHhhccc
Confidence 46799999988999999999999999987653
No 37
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=4.2e-37 Score=292.59 Aligned_cols=303 Identities=15% Similarity=0.176 Sum_probs=242.1
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|++..|. +++|+++++++.. .|.++.++.+|++|+|+++++..++..++++||+ |+++.|+|..+..
T Consensus 70 ~~~y~~~~g~-----~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~----Vl~~~p~y~~~~~ 140 (429)
T 1yiz_A 70 ANQYTRGFGH-----PRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDE----VIIIEPFFDCYEP 140 (429)
T ss_dssp GGSCCCSSCC-----HHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCE----EEEEESCCTTHHH
T ss_pred ccCCCCCCCc-----HHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCE----EEEcCCCchhHHH
Confidence 3468877777 9999999999753 3444444228999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCCcc---------c--ccc-------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEE
Q 018172 103 ETDYLRSGLYKWDGDAN---------T--FDK-------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIH 160 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~~---------~--~~~-------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~ 160 (360)
.++..|.+++.++.+.+ . ++. ++++++|++++||||||.+++ +.+.++|+++|+++|+
T Consensus 141 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (429)
T 1yiz_A 141 MVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVS 220 (429)
T ss_dssp HHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEE
Confidence 99999999998887643 1 221 357899999999999999997 3566788889999999
Q ss_pred eecccCCC-----CCcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHH
Q 018172 161 DLAYYWPQ-----YTPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKI 232 (360)
Q Consensus 161 D~ay~~~~-----~~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 232 (360)
||+|.+.. ..++. ...++++++.|+||.++++|+|+||+++ ++++++.+.......+++.+.+.|.++.++
T Consensus 221 De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~ 299 (429)
T 1yiz_A 221 DEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYG-PEALLKNLQMVHQNCVYTCATPIQEAIAVG 299 (429)
T ss_dssp ECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEES-CHHHHHHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred eccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEe-CHHHHHHHHHHHhhcccCCChHHHHHHHHH
Confidence 99998522 12222 2457899999999999999999999999 799999998877767788999999999988
Q ss_pred hcccC---CCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-----------
Q 018172 233 LGIVS---DDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----------- 298 (360)
Q Consensus 233 l~~~~---~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 298 (360)
++... ..++.++++.++.++++++++.+.|+++ ++.+..+.+++ |+|+++++
T Consensus 300 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~ 365 (429)
T 1yiz_A 300 FETELKRLKSPECYFNSISGELMAKRDYMASFLAEV-GMNPTVPQGGY-------------FMVADWSSLDSKVDLTQET 365 (429)
T ss_dssp HHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH-TCEEEECSBSS-------------EEEEECCSSCTTTTCCSSS
T ss_pred HhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcce-------------EEEEEcccccccccccccc
Confidence 87510 1123789999999999999999999988 44544444433 67777653
Q ss_pred ---h-HHHHH-HHHhhCeeeeCCCCCCC------CCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 299 ---D-EDCEK-LLRAERIMARGGRRFGA------DAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 299 ---~-~~~~~-~l~~~gI~~~pg~~f~~------~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
. ..+.+ +++++||.++||..|+. ..+++||+++.+++++++++++|.+++++
T Consensus 366 ~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 428 (429)
T 1yiz_A 366 DARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKWKGS 428 (429)
T ss_dssp SSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCSCHHHHHHHHHHHHHHSCC
T ss_pred cCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecCCHHHHHHHHHHHHHhccC
Confidence 2 34455 44588999999988863 16799999988999999999999998754
No 38
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=3.1e-37 Score=292.31 Aligned_cols=301 Identities=16% Similarity=0.184 Sum_probs=236.3
Q ss_pred ccccCCCCccccccHHHHHHHHHHHh-------hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCC
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHH-------VVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYY 97 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~-------~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~ 97 (360)
..|++..|. +++|++++++++ ..|.++.+ ++|++|+|+++++..++..++++||+ |+++.|+|
T Consensus 69 ~~y~~~~~~-----~~lr~~la~~~~~~~~~~~~~~~~~~~-~~v~~~~g~~~al~~~~~~l~~~gd~----vl~~~p~y 138 (416)
T 1bw0_A 69 NGYFPTVGS-----PEAREAVATWWRNSFVHKEELKSTIVK-DNVVLCSGGSHGILMAITAICDAGDY----ALVPQPGF 138 (416)
T ss_dssp SSCCCTTCC-----HHHHHHHHHHHHHHHCCSTTTGGGCCG-GGEEEESHHHHHHHHHHHHHCCTTCE----EEEEESCC
T ss_pred CCcCCCCCC-----HHHHHHHHHHHHhhhcccccCCCCCCc-ceEEEeCChHHHHHHHHHHhCCCCCE----EEEcCCCc
Confidence 457776776 999999999998 55555555 58999999999999999999999998 99999999
Q ss_pred CCcHHHHHHhCCeeeeecCCcc-cc--cc-------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeec
Q 018172 98 SQYPAETDYLRSGLYKWDGDAN-TF--DK-------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLA 163 (360)
Q Consensus 98 ~~~~~~~~~~g~~~~~~~~~~~-~~--~~-------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~a 163 (360)
..+...++..|++++.++.+.+ ++ +. +++++++++++|+||||.+++ +.+.++|+++|+++|+|++
T Consensus 139 ~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 218 (416)
T 1bw0_A 139 PHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEI 218 (416)
T ss_dssp THHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECT
T ss_pred HhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 9999999999999998876533 22 11 357899999999999999998 3566788889999999999
Q ss_pred ccCCC---------CCcCC--CCCCccEEEeccccccCCCCceEEEEeecCH-----HHHHHHHHHHhhccccCChHHHH
Q 018172 164 YYWPQ---------YTPIT--GAADHDIMLFTLSKCTGHAGSRIGWALVKDT-----EVARKMTRFIELGSIGVSKESQL 227 (360)
Q Consensus 164 y~~~~---------~~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~ 227 (360)
|.+.. ..++. ...+++++++|+||.|+++|+|+||++++++ .+.+.+..... .+++.|.+.|.
T Consensus 219 ~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 297 (416)
T 1bw0_A 219 YAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGM-LVCGPCTVVQA 297 (416)
T ss_dssp TTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHH-HHTCSCHHHHH
T ss_pred ccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHhc-cccCCCcHHHH
Confidence 98621 22222 2234578999999999999999999998554 23333333321 35678899999
Q ss_pred HHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC--------ch
Q 018172 228 RAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--------ED 299 (360)
Q Consensus 228 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 299 (360)
++.++++... +.++++.+++++++++++.+.|++++++.+..+.+++ |+|+.++ +.
T Consensus 298 a~~~~l~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~ 361 (416)
T 1bw0_A 298 ALGEALLNTP---QEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAM-------------YLMSRIDLEKYRDIKTD 361 (416)
T ss_dssp HHHHHHHSSC---HHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTT-------------EEEEEECGGGBSSCCSH
T ss_pred HHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeE-------------EEEEeCCHHHcCCCCCH
Confidence 9999887432 3789999999999999999999988666554444333 6676654 23
Q ss_pred HHHHH-HHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhchhc
Q 018172 300 EDCEK-LLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 300 ~~~~~-~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~~ 353 (360)
..+.+ +++++||.++||..|+. ++++|++++.++|++++++++|.+++++.++
T Consensus 362 ~~~~~~l~~~~gi~v~~g~~f~~-~~~iRis~~~~~e~l~~~l~~l~~~l~~~~~ 415 (416)
T 1bw0_A 362 VEFFEKLLEEENVQVLPGTIFHA-PGFTRLTTTRPVEVYREAVERIKAFCQRHAA 415 (416)
T ss_dssp HHHHHHHHHHHCEECEEGGGGTC-TTEEEEECCSCHHHHHHHHHHHHHHHHHHBC
T ss_pred HHHHHHHHHHCCEEEecccccCC-CCeEEEEecCCHHHHHHHHHHHHHHHHHhhc
Confidence 44444 45789999999998875 6799999977999999999999999976543
No 39
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.2e-36 Score=287.81 Aligned_cols=300 Identities=17% Similarity=0.245 Sum_probs=243.3
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
..|++..|. .++|++++++++. .|.++.+ ++|++|+|+++++..++..++++||+ |+++.|+|..+...
T Consensus 73 ~~y~~~~g~-----~~l~~~la~~~~~~~g~~~~~-~~v~~~~g~t~a~~~~~~~~~~~gd~----Vl~~~~~~~~~~~~ 142 (409)
T 2gb3_A 73 VYYSHSAGI-----WELREAFASYYKRRQRVDVKP-ENVLVTNGGSEAILFSFAVIANPGDE----ILVLEPFYANYNAF 142 (409)
T ss_dssp CCCCCTTCC-----HHHHHHHHHHHHHTSCCCCCG-GGEEEESHHHHHHHHHHHHHCCTTCE----EEEEESCCTHHHHH
T ss_pred CCCCCCCCc-----HHHHHHHHHHHHHHhCCCCCH-HHEEEeCCHHHHHHHHHHHhCCCCCE----EEEcCCCchhHHHH
Confidence 357777777 9999999999875 4555554 58999999999999999999999998 99999999999999
Q ss_pred HHHhCCeeeeecCCc-cccc------c--CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC-
Q 018172 104 TDYLRSGLYKWDGDA-NTFD------K--NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY- 169 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~-~~~~------~--~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~- 169 (360)
++..|.+++.++.+. +++. . ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|.+..+
T Consensus 143 ~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~ 222 (409)
T 2gb3_A 143 AKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFR 222 (409)
T ss_dssp HHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCS
T ss_pred HHHcCCEEEEeccCCCCCCccHHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccC
Confidence 999999999998764 2322 1 357899999999999999987 4566788889999999999986322
Q ss_pred ---Cc-CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHH
Q 018172 170 ---TP-ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFE 245 (360)
Q Consensus 170 ---~~-~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 245 (360)
.+ +.+..+++++++|+||.+|++|+|+||++++++++++.+........ +.+.+.|.++.++++. . ..+++
T Consensus 223 ~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~--~--~~~~~ 297 (409)
T 2gb3_A 223 GEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNL--D--DSFFD 297 (409)
T ss_dssp SCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTC--C--HHHHH
T ss_pred CCCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhc--c--HHHHH
Confidence 12 22235679999999999999999999999944489999988776665 8899999999888863 2 37899
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccc-CCCCCcccccccccCCCCCCcccccCC--chHHHHHHHHhh------CeeeeCC
Q 018172 246 YGRRLMSERWNMLRQVIRQSGVFGL-PEYPLEYCNFTGKFTNSHPGFAWLESK--EDEDCEKLLRAE------RIMARGG 316 (360)
Q Consensus 246 ~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~------gI~~~pg 316 (360)
+.++.++++++++.+.|+++ ++.+ ..+.+++ |+|++++ +...+.+.|.++ ||.++||
T Consensus 298 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~-------------~~~~~~~~~~~~~l~~~l~~~~~~~~~gi~v~~g 363 (409)
T 2gb3_A 298 FVRETYRERVETVLKKLEEH-GLKRFTKPSGAF-------------YITAELPVEDAEEFARWMLTDFNMDGETTMVAPL 363 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCCCBCCCSBSS-------------EEEEECSSSCHHHHHHHHHHSCCBTTEEEECEEG
T ss_pred HHHHHHHHHHHHHHHHHHHc-CceeeeCCCeeE-------------EEEEEeCCCCHHHHHHHHHhccccccCcEEEeCc
Confidence 99999999999999999988 5555 4444433 6677765 335566666655 9999999
Q ss_pred CCCCC----CCCeEEEEecCChHHHHHHHHHHHHHHhchhc
Q 018172 317 RRFGA----DAKYARVSMLSREEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 317 ~~f~~----~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~~ 353 (360)
..|+. .++++|++++.++|++++++++|++++++.++
T Consensus 364 ~~f~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 404 (409)
T 2gb3_A 364 RGFYLTPGLGKKEIRIACVLEKDLLSRAIDVLMEGLKMFCS 404 (409)
T ss_dssp GGGCSSTTTTSSEEEEECCSCHHHHHHHHHHHHHHHHHHHC
T ss_pred hHhCCCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhh
Confidence 88863 36799999988999999999999999977543
No 40
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.9e-37 Score=292.11 Aligned_cols=301 Identities=18% Similarity=0.230 Sum_probs=240.4
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~ 102 (360)
...|++..|. +++|++++++++. +|.++.++++|++|+|+++++..++..++++||+ |+++.|+|..+..
T Consensus 55 ~~~y~~~~g~-----~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~----Vl~~~~~y~~~~~ 125 (411)
T 2o0r_A 55 VNQYPPGPGS-----APLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSE----VLLIEPFYDSYSP 125 (411)
T ss_dssp CCSCCCTTCC-----HHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCE----EEEEESCCTTHHH
T ss_pred CCCCCCCCCC-----HHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCE----EEEeCCCcHhHHH
Confidence 3468877777 9999999999753 3555444328999999999999999999999998 9999999999999
Q ss_pred HHHHhCCeeeeecCCcc--c-------ccc--CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCC
Q 018172 103 ETDYLRSGLYKWDGDAN--T-------FDK--NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWP 167 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~~--~-------~~~--~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~ 167 (360)
.++..|.+++.++.+.+ + ++. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|.+.
T Consensus 126 ~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 205 (411)
T 2o0r_A 126 VVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHL 205 (411)
T ss_dssp HHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTC
T ss_pred HHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 99999999998876543 2 111 357899999999999999988 45677888899999999999853
Q ss_pred CC-----CcCCC---CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCC
Q 018172 168 QY-----TPITG---AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDD 239 (360)
Q Consensus 168 ~~-----~~~~~---~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (360)
.+ .++.. ..++++++.|+||.++++|+|+||+++ ++++++.+.......+++.+.+.|.++.++++..
T Consensus 206 ~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~--- 281 (411)
T 2o0r_A 206 VFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACG-PAELIAGVRAAKQYLSYVGGAPFQPAVALALDTE--- 281 (411)
T ss_dssp BCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEEC-CHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC---
T ss_pred ccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEee-CHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCC---
Confidence 22 22222 256799999999999999999999999 8999999988776667788889999888888732
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-----hHHHHH-HHHhhCeee
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-----DEDCEK-LLRAERIMA 313 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~l~~~gI~~ 313 (360)
+.++++.++.++++++++.+.|+++ ++.+..+.+++ |+|+++++ ...+.+ +++++||.+
T Consensus 282 -~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~~l~~~~gi~v 346 (411)
T 2o0r_A 282 -DAWVAALRNSLRARRDRLAAGLTEI-GFAVHDSYGTY-------------FLCADPRPLGYDDSTEFCAALPEKVGVAA 346 (411)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHH-TCEECCCCBSS-------------EEEEECGGGTCCCHHHHHHHHHHHHSEEC
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHc-CCEecCCCeeE-------------EEEEecCCCCCCCHHHHHHHHHHhCCEEE
Confidence 3789999999999999999999987 45554444333 67777753 344544 555789999
Q ss_pred eCCCCC-CC-----------CCCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 314 RGGRRF-GA-----------DAKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 314 ~pg~~f-~~-----------~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
+||..| +. .++++||+++.++|++++++++|.+++++.+
T Consensus 347 ~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~~~~~~ 397 (411)
T 2o0r_A 347 IPMSAFCDPAAGQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVLAERPA 397 (411)
T ss_dssp EEGGGGSCCC--------CCGGGCEEEECCSCHHHHHHHHHHHGGGGC---
T ss_pred cChhhhCCCccccccccccCCCCeEEEEecCCHHHHHHHHHHHHHHHhccC
Confidence 999888 32 2578999998799999999999999887643
No 41
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=6.7e-37 Score=281.65 Aligned_cols=283 Identities=17% Similarity=0.185 Sum_probs=229.8
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
.++|+ ..|. ++||++++++++. ++++|++|+|+++++..++..+ +||+ |+++.|+|..+...
T Consensus 45 ~~~y~-~~~~-----~~lr~~la~~~~~------~~~~i~~t~G~~~~l~~~~~~~--~gd~----vl~~~p~~~~~~~~ 106 (337)
T 3p1t_A 45 INRYP-FDAE-----PRVMRKLAEHFSC------PEDNLMLVRGIDECFDRISAEF--SSMR----FVTAWPGFDGYRAR 106 (337)
T ss_dssp TTSCC-TTHH-----HHHHHHHHHHHTS------CGGGEEEESHHHHHHHHHHHHS--TTSE----EEEESSSCSHHHHH
T ss_pred hccCC-CCch-----HHHHHHHHHHhCc------CHHHEEEeCCHHHHHHHHHHhc--CCCe----EEEeCCCcHHHHHH
Confidence 34564 3455 9999999999986 5569999999999999999988 7888 99999999999999
Q ss_pred HHHhCCeeeeecCCcc-cc-----ccCCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC--CCcCCC
Q 018172 104 TDYLRSGLYKWDGDAN-TF-----DKNNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ--YTPITG 174 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~-~~-----~~~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~--~~~~~~ 174 (360)
++..|++++.++.+.+ ++ ....+++++++++||||||.+++ +.+.+++++++. +|+||+|.+.. ......
T Consensus 107 ~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~ 185 (337)
T 3p1t_A 107 IAVSGLRHFEIGLTDDLLLDPNDLAQVSRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLA 185 (337)
T ss_dssp HTTSCCEEEEECBCTTSSBCHHHHTTCCTTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSCSSSCCC
T ss_pred HHHcCCEEEEecCCCCCCCCHHHHHhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhhccccccccc
Confidence 9999999999987643 22 22357899999999999999999 677788887886 56699998422 122234
Q ss_pred CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHH
Q 018172 175 AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSER 254 (360)
Q Consensus 175 ~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 254 (360)
..+++++++|+||.+|++|+|+||+++ ++++++.+.+.. ...+.+.+.|.++.++++. . .++++.++++.++
T Consensus 186 ~~~~~i~~~S~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~---~--~~~~~~~~~~~~~ 257 (337)
T 3p1t_A 186 YGENELVFRSFSKSYGLAGLRLGALFG-PSELIAAMKRKQ--WFCNVGTLDLHALEAALDN---D--RAREAHIAKTLAQ 257 (337)
T ss_dssp CBTTEEEEEESSSTTCCTTTCCEEEEC-CHHHHHHHHTTS--CTTCSCHHHHHHHHHHHTC---H--HHHHHHHHHHHHH
T ss_pred cCCCEEEEeeCchhccCcchheEEEEe-CHHHHHHHHhhc--CCCCCCHHHHHHHHHHhCC---H--HHHHHHHHHHHHH
Confidence 567889999999999999999999998 899999887754 4567888999998888872 1 5677777888888
Q ss_pred HHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCCh
Q 018172 255 WNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYARVSMLSRE 334 (360)
Q Consensus 255 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~ 334 (360)
++++.+.|+++ ++.+..+ .++|+|+..++.+.+.+.|+++||.++||..|+. ++++|+|++ ++
T Consensus 258 ~~~l~~~L~~~-g~~~~~~--------------~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~-~~~iRis~~-~~ 320 (337)
T 3p1t_A 258 RRRVADALRGL-GYRVASS--------------EANFVLVENAAGERTLRFLRERGIQVKDAGQFGL-HHHIRISIG-RE 320 (337)
T ss_dssp HHHHHHHHHHT-TCCBCCC--------------SSSEEEEECTTTHHHHHHHHHTTEECEEGGGGTC-CSEEEEECC-CH
T ss_pred HHHHHHHHHHC-cCEECCC--------------CCeEEEEEcCCHHHHHHHHHHCCeEEEECccCCC-CCeEEEecC-CH
Confidence 99999999988 4444333 3346777777667788889999999999999986 789999995 78
Q ss_pred HHHHHHHHHHHHHHhc
Q 018172 335 EIFNIFLERLSAIQGG 350 (360)
Q Consensus 335 e~~~~~~~~l~~~~~~ 350 (360)
+++++++++|+++++.
T Consensus 321 ~~~~~l~~al~~~~~~ 336 (337)
T 3p1t_A 321 EDNDRLLAALAEYSDH 336 (337)
T ss_dssp HHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999988653
No 42
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=3.4e-37 Score=293.75 Aligned_cols=301 Identities=16% Similarity=0.182 Sum_probs=245.0
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhc--CCCC--CCCceEEEeCCCCCC
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALS--SPGG--PEPISVVSAAPYYSQ 99 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~--~~gd--~~~~~vl~~~p~~~~ 99 (360)
..|++..|. +++|++++++++. +|.++++ ++|++|+|++++++.++..++ ++|| + |+++.|+|..
T Consensus 76 ~~y~~~~g~-----~~lr~~la~~~~~~~g~~~~~-~~i~~t~g~t~al~~~~~~l~~~~~gd~~~----Vl~~~p~~~~ 145 (437)
T 3g0t_A 76 SIYPNLDGL-----PELKQEASRFAKLFVNIDIPA-RACVPTVGSMQGCFVSFLVANRTHKNREYG----TLFIDPGFNL 145 (437)
T ss_dssp GSCCCTTCC-----HHHHHHHHHHHHHHHCCCCCG-GGEEEESHHHHHHHHHHHHHTTSCTTCSCC----EEEEESCCHH
T ss_pred cCCCCCCCh-----HHHHHHHHHHHHHhhCCCCCc-ccEEEeCCHHHHHHHHHHHHhcCCCCCccE----EEEeCCCcHh
Confidence 568888887 9999999999874 4555555 589999999999999999998 9999 8 9999999999
Q ss_pred cHHHHHHhCCeeeeecCCcccccc----------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeeccc
Q 018172 100 YPAETDYLRSGLYKWDGDANTFDK----------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYY 165 (360)
Q Consensus 100 ~~~~~~~~g~~~~~~~~~~~~~~~----------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~ 165 (360)
+...++..|++++.++.+.+++.. ++++++|++++||||||.+++ +.+.++|+++|+++|+|++|.
T Consensus 146 ~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~ 225 (437)
T 3g0t_A 146 NKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYF 225 (437)
T ss_dssp HHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred HHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchh
Confidence 999999999999999876444311 467899999999999999987 245678888999999999998
Q ss_pred CCCC---C----------cCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHH-H-----------------HHHHH
Q 018172 166 WPQY---T----------PITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVAR-K-----------------MTRFI 214 (360)
Q Consensus 166 ~~~~---~----------~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~-~-----------------l~~~~ 214 (360)
+..+ . .+....++++++.|+||.++++|+|+||+++ ++++++ . +....
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (437)
T 3g0t_A 226 GMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMI-SGKLYEREYPDLEESFGRLRFGEALSSSAL 304 (437)
T ss_dssp TCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEE-CHHHHHCBCGGGHHHHSCSBHHHHHHTTHH
T ss_pred hcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEE-CHHHhhhhhhcccccccccchhHHHHHHHH
Confidence 5221 1 1112477889999999999999999999999 788888 7 77666
Q ss_pred hhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccC------CCCCcccccccccCCCC
Q 018172 215 ELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLP------EYPLEYCNFTGKFTNSH 288 (360)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~------~~~~~~~~~~~~~~~~~ 288 (360)
.....+.+.+.|.++.++++... .++.++++.+++++++++++.+.|+++ ++.+. .+. ..
T Consensus 305 ~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~------------~~ 370 (437)
T 3g0t_A 305 YALSSGATHSAQWGMAAMLKACN-DGEYNFRDSVIEYGRKARIMKKMFLDN-GFNIVYDKDGNEPL------------AD 370 (437)
T ss_dssp HHHHSSSCHHHHHHHHHHHHHHH-TTSCCHHHHHHHHHHHHHHHHHHHHTT-TEEESSCEETTEEC------------CS
T ss_pred hhhcCCCCHHHHHHHHHHHhCcH-hHHHHHHHHHHHHHHHHHHHHHHHHHc-CCEEeccccCCCCC------------ce
Confidence 66678899999999999887421 112338999999999999999999998 45544 120 23
Q ss_pred CCcccccCC--chHHHHHHHHhhCeeeeCCCCCCCCC-CeEEEEecC-ChHHHHHHHHHHHHHHhc
Q 018172 289 PGFAWLESK--EDEDCEKLLRAERIMARGGRRFGADA-KYARVSMLS-REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 289 ~~~~~~~~~--~~~~~~~~l~~~gI~~~pg~~f~~~~-~~~R~s~~~-~~e~~~~~~~~l~~~~~~ 350 (360)
++|+|++++ +...+.+.|.++||.++||..|+... +++|+|++. +++++++++++|++++++
T Consensus 371 ~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 371 GFYFTVGYKGMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp SSEEEEEETTCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCCCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 347888876 33777788888999999999887643 799999987 999999999999998753
No 43
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=7.8e-37 Score=284.49 Aligned_cols=282 Identities=18% Similarity=0.214 Sum_probs=232.5
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|++..+ +++|++++++++. ++++|++|+|+++++..++..++++||+ |+++.|+|..+...+
T Consensus 60 ~~y~~~~~------~~lr~~la~~~~~------~~~~v~~~~g~~~a~~~~~~~l~~~gd~----vl~~~~~~~~~~~~~ 123 (365)
T 3get_A 60 HLYPDDSM------IELKSTLAQKYKV------QNENIIIGAGSDQVIEFAIHSKLNSKNA----FLQAGVTFAMYEIYA 123 (365)
T ss_dssp TSCCCTTC------HHHHHHHHHHHTC------CGGGEEEESSHHHHHHHHHHHHCCTTCE----EEECSSCCTHHHHHH
T ss_pred ccCCCCCh------HHHHHHHHHHhCC------CcceEEECCCHHHHHHHHHHHHhCCCCE----EEEeCCChHHHHHHH
Confidence 45665543 8999999999985 5569999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecC-Ccccccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhh--hcCcEEEEeecccCCC---C-
Q 018172 105 DYLRSGLYKWDG-DANTFDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNR--SAEGKLIHDLAYYWPQ---Y- 169 (360)
Q Consensus 105 ~~~g~~~~~~~~-~~~~~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~--~~~~~li~D~ay~~~~---~- 169 (360)
+..|++++.++. +.+.++. ++++++|++++||||||.+++ +.+.++++ ++|+++|+|++|.+.. .
T Consensus 124 ~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~ 203 (365)
T 3get_A 124 KQCGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDS 203 (365)
T ss_dssp HHHTCEEEECSSSSCCHHHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCG
T ss_pred HHcCCEEEEEecCCCCCCCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCC
Confidence 999999999986 2222211 468999999999999999998 44554444 4799999999998322 1
Q ss_pred ---CcC---CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 170 ---TPI---TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 170 ---~~~---~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
.+. .+..+++++++|+||.+|++|+|+||+++ ++++++.+..... .++.|.+.|.++.++++ .. .+
T Consensus 204 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~---~~--~~ 275 (365)
T 3get_A 204 KKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIA-NANIISAFYKLRA--PFNVSNLALKAAVAAMD---DD--EF 275 (365)
T ss_dssp GGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEE-CHHHHHHHHHHSC--TTCSCHHHHHHHHHHHT---CH--HH
T ss_pred cccccHhHHhccCCCEEEEeecchHhcCcchheEEEEc-CHHHHHHHHHhcC--CCCcCHHHHHHHHHHhC---CH--HH
Confidence 111 13457889999999999999999999999 8999999988765 35789999999999887 22 88
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCCCCC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRRFGA 321 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~f~~ 321 (360)
+++.+++++++++++.+.|+++ ++.+.. +.++|+|+++++ ...+.+.|.++||.++||..|+
T Consensus 276 ~~~~~~~~~~~~~~l~~~l~~~-g~~~~~--------------~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~- 339 (365)
T 3get_A 276 TEKTLENNFSQMELYKEFAKKH-NIKIID--------------SYTNFITYFFDEKNSTDLSEKLLKKGIIIRNLKSYG- 339 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCEECC--------------CSSSEEEEECSSSCHHHHHHHHHTTTEECEECGGGT-
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCEECC--------------CCCeEEEEECCCCCHHHHHHHHHHCCEEEEECccCC-
Confidence 9999999999999999999988 444332 234478888875 3777888888999999999888
Q ss_pred CCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 322 DAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 322 ~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
++++|++++ +++++++++++|++++
T Consensus 340 -~~~iRis~~-~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 340 -LNAIRITIG-TSYENEKFFTEFDKIL 364 (365)
T ss_dssp -CSEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred -CCEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 789999995 8999999999999876
No 44
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=7.4e-37 Score=288.00 Aligned_cols=294 Identities=18% Similarity=0.147 Sum_probs=238.5
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|++..|. .++|++++++++. ++++|++|+|+++++..++..++++||+ |+++.|+|..+...+
T Consensus 68 ~~y~~~~~~-----~~l~~~la~~~g~------~~~~v~~~~g~~~al~~~~~~~~~~gd~----Vl~~~p~y~~~~~~~ 132 (397)
T 2zyj_A 68 LQYSPTEGY-----APLRAFVAEWIGV------RPEEVLITTGSQQALDLVGKVFLDEGSP----VLLEAPSYMGAIQAF 132 (397)
T ss_dssp TSCCCTTCC-----HHHHHHHHHHHTS------CGGGEEEESHHHHHHHHHHHHHCCTTCE----EEEEESCCHHHHHHH
T ss_pred hCCCCCCCC-----HHHHHHHHHHhCC------ChhhEEEeccHHHHHHHHHHHhCCCCCE----EEEeCCCcHHHHHHH
Confidence 457776776 9999999999963 4568999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecCCcccccc-------C-CCeeEE-EEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCCC--
Q 018172 105 DYLRSGLYKWDGDANTFDK-------N-NGAYIE-VVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQY-- 169 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~~~~~-------~-~~~~~i-~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~~-- 169 (360)
+..|.+++.++.+.++++. + .++++| ++++||||||.+++. .+.++|+++|+++|+||+|.+..+
T Consensus 133 ~~~g~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g 212 (397)
T 2zyj_A 133 RLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGE 212 (397)
T ss_dssp HTTCCEEEEEEEETTEECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSS
T ss_pred HHcCCEEEecCcCCCCCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCC
Confidence 9999999988865443322 1 367887 579999999999883 566788889999999999986432
Q ss_pred ---CcCC--CCC---CccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCch
Q 018172 170 ---TPIT--GAA---DHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 170 ---~~~~--~~~---~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
.++. +.. ++++++.|+||.++ +|+|+||+++ ++++++.+........++.|.+.|.++.++++. ..+
T Consensus 213 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~--~~~- 287 (397)
T 2zyj_A 213 ARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVA-HPEALQKLVQAKQGADLHTPMLNQMLVHELLKE--GFS- 287 (397)
T ss_dssp CCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEEC-CHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTT--THH-
T ss_pred CCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEec-CHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHh--CCH-
Confidence 1111 112 67899999999999 9999999999 799999998777666677899999999888872 222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhc-C-CcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhhCeeeeCC
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQS-G-VFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERIMARGG 316 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~pg 316 (360)
+++++.++.++++++++.+.|+++ + ++.+..|.++ +|+|+++++ ...+.+.|.++||.+.||
T Consensus 288 ~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g-------------~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g 354 (397)
T 2zyj_A 288 ERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGG-------------MFVWMELPKGLSAEGLFRRALEENVAFVPG 354 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBS-------------SEEEEECSTTCCHHHHHHHHHHTTEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCcc-------------EEEEEEcCCCCCHHHHHHHHHHCCCEEech
Confidence 678899999999999999999874 4 3554444433 478888864 366777777889999999
Q ss_pred CCCCC---CCCeEEEEecC-ChHHHHHHHHHHHHHHhch
Q 018172 317 RRFGA---DAKYARVSMLS-REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 317 ~~f~~---~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~ 351 (360)
..|+. .++++||+++. ++|++++++++|.+++++.
T Consensus 355 ~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 393 (397)
T 2zyj_A 355 GPFFANGGGENTLRLSYATLDREGIAEGVRRLGRALKGL 393 (397)
T ss_dssp GGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 98853 36799999987 7999999999999998654
No 45
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=2e-36 Score=281.31 Aligned_cols=279 Identities=19% Similarity=0.227 Sum_probs=231.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCCc
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDA 118 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 118 (360)
+++|++++++++. ++++|++|+|+++++..++..++++||+ |+++.|+|..+...++..|++++.++.+.
T Consensus 68 ~~lr~~la~~~g~------~~~~i~~t~g~~~al~~~~~~l~~~gd~----Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~ 137 (360)
T 3hdo_A 68 QKLREVAGELYGF------DPSWIIMANGSDEVLNNLIRAFAAEGEE----IGYVHPSYSYYGTLAEVQGARVRTFGLTG 137 (360)
T ss_dssp HHHHHHHHHHHTC------CGGGEEEESSHHHHHHHHHHHHCCTTCE----EEEESSSCTHHHHHHHHHTCEEEEECBCT
T ss_pred HHHHHHHHHHhCc------CcceEEEcCCHHHHHHHHHHHHhCCCCE----EEEcCCChHHHHHHHHHCCCEEEEeeCCC
Confidence 9999999999984 4569999999999999999999999998 99999999999999999999999998764
Q ss_pred c----ccccCCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC---CCcCCCCCCccEEEeccccccC
Q 018172 119 N----TFDKNNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ---YTPITGAADHDIMLFTLSKCTG 190 (360)
Q Consensus 119 ~----~~~~~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~---~~~~~~~~~~~i~~~S~sK~~~ 190 (360)
+ .+....+++++++++|+||||.+++ +.+.++|+++|+++|+|++|.+.. ........++++++.|+||.++
T Consensus 138 ~~~~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g 217 (360)
T 3hdo_A 138 DFRIAGFPERYEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYS 217 (360)
T ss_dssp TSSBTTCCSSBCSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTS
T ss_pred CCCHHHHHhhcCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhc
Confidence 3 2222345789999999999999999 677888998999999999998521 1122235678899999999999
Q ss_pred CCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q 018172 191 HAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGL 270 (360)
Q Consensus 191 ~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 270 (360)
++|+|+||+++ ++++++.+..... .++.|.+.|.++.++++. ..++++.+++++++++++.+.|+++ ++.+
T Consensus 218 ~~G~r~G~~~~-~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~-----~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~ 288 (360)
T 3hdo_A 218 LAGMRIGLAIA-RPEVIAALDKIRD--HYNLDRLAQAACVAALRD-----QAYLSECCRRIRETREWFTTELRSI-GYDV 288 (360)
T ss_dssp CTTSCCEEEEC-CHHHHHHHHHHSC--SCCSCHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred CCccceeeEee-CHHHHHHHHHhCC--CCCCCHHHHHHHHHHhcC-----HHHHHHHHHHHHHHHHHHHHHHHHC-CCEE
Confidence 99999999999 8999999988764 468899999999998882 2789999999999999999999988 4444
Q ss_pred CCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 271 PEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
.. +.++|+|+.+++ .+.+.+.|.++||.++||...+ .++++|+|++ +++++++++++|+++.
T Consensus 289 ~~--------------~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~-~~~~iRis~~-~~~e~~~l~~al~~~~ 352 (360)
T 3hdo_A 289 IP--------------SQGNYLFATPPDRDGKRVYDGLYARKVLVRHFSDPL-LAHGMRISIG-TREEMEQTLAALKEIG 352 (360)
T ss_dssp CC--------------CSSSEEEEECTTCCHHHHHHHHHHTTEECBCCCSTT-TTTSEEEECC-CHHHHHHHHHHHHHHH
T ss_pred cC--------------CCccEEEEECCCCCHHHHHHHHHHCCEEEEECCCCC-CCCEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 32 233477777764 3777888889999999987643 3689999995 8999999999999988
Q ss_pred hchh
Q 018172 349 GGSI 352 (360)
Q Consensus 349 ~~~~ 352 (360)
+..+
T Consensus 353 ~~~~ 356 (360)
T 3hdo_A 353 EGHH 356 (360)
T ss_dssp C---
T ss_pred cccc
Confidence 7654
No 46
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=1.4e-36 Score=286.19 Aligned_cols=292 Identities=14% Similarity=0.191 Sum_probs=236.2
Q ss_pred HHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 39 PELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 39 ~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
+++|++++++++. .|.++.+ ++|++|+|+++++..++..++++||+ |+++.|+|..+...++..|.+++.++.+
T Consensus 69 ~~l~~~la~~l~~~~g~~~~~-~~v~~t~g~~~a~~~~~~~l~~~gd~----vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 143 (399)
T 1c7n_A 69 EEYKKTVKKWMKDRHQWDIQT-DWIINTAGVVPAVFNAVREFTKPGDG----VIIITPVYYPFFMAIKNQERKIIECELL 143 (399)
T ss_dssp HHHHHHHHHHHHHHHCCCCCG-GGEEEESSHHHHHHHHHHHHCCTTCE----EEECSSCCTHHHHHHHTTTCEEEECCCE
T ss_pred HHHHHHHHHHHHHHhCCCCCh-hhEEEcCCHHHHHHHHHHHhcCCCCE----EEEcCCCcHhHHHHHHHcCCEEEecccc
Confidence 9999999999754 3544444 58999999999999999999999998 9999999999999999999999988765
Q ss_pred -ccc---ccc-------C-CCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC-----CcCCCC-
Q 018172 118 -ANT---FDK-------N-NGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY-----TPITGA- 175 (360)
Q Consensus 118 -~~~---~~~-------~-~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~-----~~~~~~- 175 (360)
.++ ++. + +++++|++++||||||.+++ +.+.++|+++|+++|+||+|.+..+ .++...
T Consensus 144 ~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 223 (399)
T 1c7n_A 144 EKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSID 223 (399)
T ss_dssp EETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSC
T ss_pred cCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcC
Confidence 222 211 2 67899999999999999988 3566788889999999999986322 222222
Q ss_pred ---CCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccc-cCChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 176 ---ADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSI-GVSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 176 ---~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
.++++++.|+||.++++|+|+||++++++++++.+.......+. +.+.+.|.++.++++.. ..++++.++.+
T Consensus 224 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~ 299 (399)
T 1c7n_A 224 EQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKEC----GKWLDGCIKVI 299 (399)
T ss_dssp HHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC----HHHHHHHHHHH
T ss_pred ccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC----hHHHHHHHHHH
Confidence 46789999999999999999999998557899999877665544 67899999988888732 37899999999
Q ss_pred HHHHHHHHHHHHh-cCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHH-hhCeeeeCCCCCCC-CCC
Q 018172 252 SERWNMLRQVIRQ-SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLR-AERIMARGGRRFGA-DAK 324 (360)
Q Consensus 252 ~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~-~~gI~~~pg~~f~~-~~~ 324 (360)
+++++++.+.|++ ++++.+..+.+++ ++|+++++ ...+.+.|. ++||.++||..|+. .++
T Consensus 300 ~~~~~~l~~~L~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~ 366 (399)
T 1c7n_A 300 DKNQRIVKDFFEVNHPEIKAPLIEGTY-------------LQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIG 366 (399)
T ss_dssp HHHHHHHHHHHHHHCTTSBCCCCSBSS-------------EEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTT
T ss_pred HHHHHHHHHHHHhhCCCCeEecCCceE-------------EEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccCCCCCC
Confidence 9999999999998 6666665555443 55777753 355666665 78999999998863 467
Q ss_pred eEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 325 YARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 325 ~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
++||+++..+|++++++++|.+++++.+
T Consensus 367 ~iRis~~~~~~~l~~~l~~l~~~l~~~~ 394 (399)
T 1c7n_A 367 FERINLAAPSSVIQESLERLNKALKDLK 394 (399)
T ss_dssp EEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred eEEEEeccCHHHHHHHHHHHHHHHHHHH
Confidence 9999998888999999999999987654
No 47
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=2.3e-36 Score=281.17 Aligned_cols=277 Identities=17% Similarity=0.215 Sum_probs=232.9
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
.+++|++++++++. ++++|++|+|++++++.++..++++||+ |+++.|+|..+...++..|++++.++.+
T Consensus 69 ~~~lr~~la~~~~~------~~~~v~~~~g~t~a~~~~~~~~~~~gd~----vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 138 (363)
T 3ffh_A 69 ASSLRKEVADFYQL------EEEELIFTAGVDELIELLTRVLLDTTTN----TVMATPTFVQYRQNALIEGAEVREIPLL 138 (363)
T ss_dssp CHHHHHHHHHHHTC------CGGGEEEESSHHHHHHHHHHHHCSTTCE----EEEEESSCHHHHHHHHHHTCEEEEEECC
T ss_pred hHHHHHHHHHHhCC------ChhhEEEeCCHHHHHHHHHHHHccCCCE----EEEcCCChHHHHHHHHHcCCEEEEecCC
Confidence 39999999999985 5579999999999999999999999998 9999999999999999999999999876
Q ss_pred cc-cccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhc--CcEEEEeecccCCCC------CcCCCCCCccE
Q 018172 118 AN-TFDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSA--EGKLIHDLAYYWPQY------TPITGAADHDI 180 (360)
Q Consensus 118 ~~-~~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~--~~~li~D~ay~~~~~------~~~~~~~~~~i 180 (360)
.+ .++. ++++++|++++||||||.+++ +.+.++++.. |+++|+|++|.+... .......++++
T Consensus 139 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i 218 (363)
T 3ffh_A 139 QDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLI 218 (363)
T ss_dssp TTSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEE
T ss_pred CCCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEE
Confidence 32 2221 468999999999999999998 5566666655 999999999984221 11224577899
Q ss_pred EEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHH
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQ 260 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 260 (360)
++.|+||.+|++|+|+||+++ ++++++.+..... .++.|.+.|.++.++++ +. .++++.+++++++++++.+
T Consensus 219 ~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~---~~--~~~~~~~~~~~~~~~~l~~ 290 (363)
T 3ffh_A 219 ITRTFSKIYGLASARVGYGIA-DKEIIRQLNIVRP--PFNTTSIGQKLAIEAIK---DQ--AFIGECRTSNANGIKQYEA 290 (363)
T ss_dssp EEEESSSTTCCSSCCCEEEEE-CHHHHHHHHHTCC--SCCCBHHHHHHHHHHHH---CH--HHHHHHHHHHHHHHHHHHH
T ss_pred EEeechhhhcCchhceeeeec-CHHHHHHHHHhCC--CCCCCHHHHHHHHHHhc---CH--HHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 8999999988764 57899999999999887 22 7899999999999999999
Q ss_pred HHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-chHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHH
Q 018172 261 VIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-EDEDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNI 339 (360)
Q Consensus 261 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~ 339 (360)
.|+++.++.+.. +.++|+|++++ +...+.+.|.++||.++||..|+. ++++|++++ +++++++
T Consensus 291 ~l~~~~g~~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~-~~~iRis~~-~~~~i~~ 354 (363)
T 3ffh_A 291 FAKRFEKVKLYP--------------ANGNFVLIDLGIEAGTIFSYLEKNGYITRSGAALGF-PTAVRITIG-KEEDNSA 354 (363)
T ss_dssp HHHHCTTCEECC--------------CCSSEEEEECSSCHHHHHHHHHHTTEECEETTTTTC-TTEEEEECC-CHHHHHH
T ss_pred HHhhCCCceECC--------------CCCeEEEEECCCCHHHHHHHHHHCCeEEEeCccCCC-CCeEEEECC-CHHHHHH
Confidence 999965555432 33457888887 447778888889999999999986 789999985 9999999
Q ss_pred HHHHHHHHH
Q 018172 340 FLERLSAIQ 348 (360)
Q Consensus 340 ~~~~l~~~~ 348 (360)
++++|++++
T Consensus 355 ~~~~l~~~l 363 (363)
T 3ffh_A 355 VIALLEKLL 363 (363)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998864
No 48
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=5.3e-37 Score=289.87 Aligned_cols=297 Identities=18% Similarity=0.246 Sum_probs=240.1
Q ss_pred cccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 26 YLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
.|++..|. +++|++++++++. +|..+++ ++|++|+|+++++..++..++++||+ |++++|+|..+...+
T Consensus 73 ~y~~~~g~-----~~l~~~la~~l~~~~g~~~~~-~~v~~t~g~~~al~~~~~~l~~~gd~----Vl~~~~~~~~~~~~~ 142 (406)
T 1xi9_A 73 YYGDSEGL-----PELRKAIVEREKRKNGVDITP-DDVRVTAAVTEALQLIFGALLDPGDE----ILVPGPSYPPYTGLV 142 (406)
T ss_dssp SCCCTTCC-----HHHHHHHHHHHHHHHCCCCCG-GGEEEESHHHHHHHHHHHHHCCTTCE----EEEEESCCHHHHHHH
T ss_pred CCCCCCCc-----HHHHHHHHHHHHHhcCCCCCH-HHEEEcCChHHHHHHHHHHhCCCCCE----EEEcCCCCccHHHHH
Confidence 57777777 9999999999864 4555555 58999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecCCc-cccc--c-------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC-
Q 018172 105 DYLRSGLYKWDGDA-NTFD--K-------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY- 169 (360)
Q Consensus 105 ~~~g~~~~~~~~~~-~~~~--~-------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~- 169 (360)
+..|++++.++.+. +++. . ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|.+..+
T Consensus 143 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~ 222 (406)
T 1xi9_A 143 KFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYE 222 (406)
T ss_dssp HHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSS
T ss_pred HHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccC
Confidence 99999999888754 2321 1 357899999999999999987 3566788889999999999986432
Q ss_pred ---CcCCC-CCCc-cEEEeccccccCCCCceEEEEe--ecCH----HHHHHHHHHHhhccccCChHHHHHHHHHhcccCC
Q 018172 170 ---TPITG-AADH-DIMLFTLSKCTGHAGSRIGWAL--VKDT----EVARKMTRFIELGSIGVSKESQLRAAKILGIVSD 238 (360)
Q Consensus 170 ---~~~~~-~~~~-~i~~~S~sK~~~~~G~r~G~~~--~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 238 (360)
.++.. ..++ +++++|+||.++++|+|+||++ + ++ ++++.+....... ++.+.+.|.++.++++. .
T Consensus 223 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~--~ 298 (406)
T 1xi9_A 223 GEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVD-PENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTG--P 298 (406)
T ss_dssp SCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEEC-TTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHS--C
T ss_pred CCCCCHHHcCCCceEEEEeccccccCCCccEEEEEEEec-CchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhC--C
Confidence 11111 1567 8999999999999999999999 7 77 8999998777655 78889999999998863 2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-----hHHHHHHH-HhhCee
Q 018172 239 DYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-----DEDCEKLL-RAERIM 312 (360)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l-~~~gI~ 312 (360)
. .++++.++.++++++++.+.|++++++.+..+.+++ |+|++++. ...+.+.| +++||.
T Consensus 299 ~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~~l~~~~gi~ 363 (406)
T 1xi9_A 299 M--DYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAF-------------YIFPKIEVGPWKNDKEFVLDVLHNAHVL 363 (406)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSS-------------EECCEECSCSCSSHHHHHHHHHHHHCEE
T ss_pred c--HHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCeeE-------------EEEEecCccCCCCHHHHHHHHHHhCCEE
Confidence 2 668999999999999999999988666665555443 56665542 35555555 489999
Q ss_pred eeCCCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 313 ARGGRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 313 ~~pg~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
+.||..|+. .++++||+++.++|++++++++|.+++++.
T Consensus 364 v~~g~~f~~~~~~~lRis~~~~~~~i~~~~~~l~~~l~~~ 403 (406)
T 1xi9_A 364 FVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKER 403 (406)
T ss_dssp CEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHHC
T ss_pred EeCchhcCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 999998874 367999999889999999999999998754
No 49
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=7e-37 Score=291.66 Aligned_cols=301 Identities=19% Similarity=0.270 Sum_probs=236.6
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhc---CCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVV---DNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP 101 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~---~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~ 101 (360)
..|++..|. ++||++++++++.. +.++. +++|++|+|+++++..++..++++||. |+++.|+|..+.
T Consensus 80 ~~y~~~~g~-----~~l~~~la~~~~~~~~~~~~~~-~~~v~~~~gg~~a~~~~~~~l~~~gd~----vl~~~p~~~~~~ 149 (435)
T 3piu_A 80 ALFQDYHGL-----PAFKKAMVDFMAEIRGNKVTFD-PNHLVLTAGATSANETFIFCLADPGEA----VLIPTPYYPGFD 149 (435)
T ss_dssp HHCCCTTCC-----HHHHHHHHHHHHHHTTTSSCCC-GGGEEEEEHHHHHHHHHHHHHCCTTCE----EEEEESCCTTHH
T ss_pred cccCCCCCc-----HHHHHHHHHHHHHhhCCCCCCC-HHHEEEcCChHHHHHHHHHHhcCCCCe----EEECCCccccHH
Confidence 568888888 99999999998732 23344 458999999999999999999999998 999999999999
Q ss_pred HHHH-HhCCeeeeecCCccc-c--cc-------------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEE
Q 018172 102 AETD-YLRSGLYKWDGDANT-F--DK-------------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIH 160 (360)
Q Consensus 102 ~~~~-~~g~~~~~~~~~~~~-~--~~-------------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~ 160 (360)
..+. ..|.+++.++.+.++ + +. ..++++|++++||||||.+++ +.+.++|+++|+++|+
T Consensus 150 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 229 (435)
T 3piu_A 150 RDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLIS 229 (435)
T ss_dssp HHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 8888 789999999876432 2 11 137899999999999999988 3456778889999999
Q ss_pred eecccCCCC-----CcCC---CC---------CCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCCh
Q 018172 161 DLAYYWPQY-----TPIT---GA---------ADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSK 223 (360)
Q Consensus 161 D~ay~~~~~-----~~~~---~~---------~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~ 223 (360)
||+|.+..+ .+.. .. .++++++.|+||.+|++|+|+||++++++.+.+.+.+... ..+.++
T Consensus 230 Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~ 307 (435)
T 3piu_A 230 DEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS--FGLVSS 307 (435)
T ss_dssp ECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGG--GSCCCH
T ss_pred eccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHhh--cCCCCH
Confidence 999985222 1111 11 5678999999999999999999999966788888876654 356788
Q ss_pred HHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-----
Q 018172 224 ESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----- 298 (360)
Q Consensus 224 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 298 (360)
+.|.++.++++... ..++++++.+++++++++++.+.|+++ ++.+..+.+++ |+|+++++
T Consensus 308 ~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~-------------~~~~~l~~~~~~~ 372 (435)
T 3piu_A 308 QTQHLLSAMLSDKK-LTKNYIAENHKRLKQRQKKLVSGLQKS-GISCLNGNAGL-------------FCWVDMRHLLRSN 372 (435)
T ss_dssp HHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEECCCCSSS-------------EEEEECGGGSSSS
T ss_pred HHHHHHHHHhcChH-HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeE-------------EEEEEcccccccC
Confidence 99999888887321 012467888999999999999999988 45544444433 77887764
Q ss_pred ---h-HHHHHHH-HhhCeeeeCCCCCCC-CCCeEEEEecC-ChHHHHHHHHHHHHHHhchh
Q 018172 299 ---D-EDCEKLL-RAERIMARGGRRFGA-DAKYARVSMLS-REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 299 ---~-~~~~~~l-~~~gI~~~pg~~f~~-~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~~ 352 (360)
. ..+.+.| +++||.+.||..|+. .++++||+++. ++|++++++++|.+++++.+
T Consensus 373 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~~~~ 433 (435)
T 3piu_A 373 TFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGEYY 433 (435)
T ss_dssp SHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHHHHHC
T ss_pred CchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHHh
Confidence 2 3444444 445999999998864 57899999987 99999999999999987653
No 50
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=1.7e-36 Score=288.40 Aligned_cols=301 Identities=17% Similarity=0.266 Sum_probs=236.3
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhh-cCCC--CCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHV-VDNA--VSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY 100 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~--~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~ 100 (360)
..+|+++.|. ++||++++++++. +|.. +.+ ++|++|+|+++++..++..++++||+ |+++.|+|..+
T Consensus 76 ~~~Y~~~~g~-----~~lr~~la~~~~~~~g~~~~~~~-~~i~~~~G~~~ai~~~~~~~~~~gd~----Vl~~~p~y~~~ 145 (428)
T 1iay_A 76 IANFQDYHGL-----PEFRKAIAKFMEKTRGGRVRFDP-ERVVMAGGATGANETIIFCLADPGDA----FLVPSPYYPAF 145 (428)
T ss_dssp HHHCCCTTCC-----HHHHHHHHHHHHHHTTTCSCCCT-TSCEEEEHHHHHHHHHHHHHCCTTCE----EEEESSCCTTH
T ss_pred hcCCCCCCCc-----HHHHHHHHHHHHHhcCCCCCCCh-hhEEEccChHHHHHHHHHHhCCCCCe----EEEccCCCcch
Confidence 4679888887 9999999999873 3433 334 58999999999999999999999998 99999999999
Q ss_pred HHHH-HHhCCeeeeecCCcc-cc--cc-------C------CCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEE
Q 018172 101 PAET-DYLRSGLYKWDGDAN-TF--DK-------N------NGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLI 159 (360)
Q Consensus 101 ~~~~-~~~g~~~~~~~~~~~-~~--~~-------~------~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li 159 (360)
...+ ...|.+++.++.+.+ ++ +. + +++++|++++||||||.+++ +.+.++|+++|+++|
T Consensus 146 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li 225 (428)
T 1iay_A 146 NRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLV 225 (428)
T ss_dssp HHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEE
Confidence 8755 467999999887532 22 11 1 36899999999999999998 345678888999999
Q ss_pred EeecccCCCC-----CcCC---CC-------CCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChH
Q 018172 160 HDLAYYWPQY-----TPIT---GA-------ADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKE 224 (360)
Q Consensus 160 ~D~ay~~~~~-----~~~~---~~-------~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~ 224 (360)
+||+|.+..+ .++. .. .++++++.|+||.+|++|+|+||++++++++++.+.+... .++.+.+
T Consensus 226 ~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~--~~~~~~~ 303 (428)
T 1iay_A 226 CDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSS--FGLVSTQ 303 (428)
T ss_dssp EECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHT--TSCCCHH
T ss_pred EeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHh--cccCCHH
Confidence 9999986222 1211 12 5778999999999999999999999866888888887643 3578899
Q ss_pred HHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc------
Q 018172 225 SQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE------ 298 (360)
Q Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 298 (360)
+|.++.++++... .++.++++.++.++++++++.+.|+++ ++.+..+.+ ++|+|+++++
T Consensus 304 ~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-------------g~~~~~~~~~~~~~~~ 368 (428)
T 1iay_A 304 TQYFLAAMLSDEK-FVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCLKNNA-------------GLFCWMDLRPLLREST 368 (428)
T ss_dssp HHHHHHHHTTCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSS-------------SSEEEEECGGGCSSSS
T ss_pred HHHHHHHHhcChH-HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCe-------------eEEEEEechhhcCCCc
Confidence 9999988887310 022478889999999999999999988 444433323 3477888753
Q ss_pred --h-HHHHHHHHhh-CeeeeCCCCCCC-CCCeEEEEec-CChHHHHHHHHHHHHHHhch
Q 018172 299 --D-EDCEKLLRAE-RIMARGGRRFGA-DAKYARVSML-SREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 299 --~-~~~~~~l~~~-gI~~~pg~~f~~-~~~~~R~s~~-~~~e~~~~~~~~l~~~~~~~ 351 (360)
. ..+.+.|.++ ||.++||..|+. .++++||+++ .++|++++++++|++++++.
T Consensus 369 ~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 427 (428)
T 1iay_A 369 FDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGVE 427 (428)
T ss_dssp HHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhcc
Confidence 2 4566666665 999999998865 3679999998 49999999999999998764
No 51
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=2.8e-36 Score=280.84 Aligned_cols=286 Identities=19% Similarity=0.243 Sum_probs=231.5
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|++. |. +++|++++++++. ++++|++|+|+++++..++..+ +||+ |+++.|+|..+...+
T Consensus 54 ~~y~~~-~~-----~~l~~~la~~~~~------~~~~v~~~~g~~~al~~~~~~~--~gd~----vl~~~p~y~~~~~~~ 115 (364)
T 1lc5_A 54 ERYPDA-DY-----FHLHQALARHHQV------PASWILAGNGETESIFTVASGL--KPRR----AMIVTPGFAEYGRAL 115 (364)
T ss_dssp GSCCCT-TC-----HHHHHHHHHHHTS------CGGGEEEESSHHHHHHHHHHHH--CCSE----EEEEESCCTHHHHHH
T ss_pred hcCCCC-CH-----HHHHHHHHHHHCc------CHHHEEECCCHHHHHHHHHHHc--CCCe----EEEeCCCcHHHHHHH
Confidence 457543 55 9999999999975 4568999999999999999998 5777 999999999999999
Q ss_pred HHhCCeeeeecCCc-ccccc--------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC--
Q 018172 105 DYLRSGLYKWDGDA-NTFDK--------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY-- 169 (360)
Q Consensus 105 ~~~g~~~~~~~~~~-~~~~~--------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~-- 169 (360)
+..|.+++.++.+. +++.. +++++++++++||||||.+++ +.+.++|+++|+++|+|++|.+..+
T Consensus 116 ~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~ 195 (364)
T 1lc5_A 116 AQSGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHE 195 (364)
T ss_dssp HHTTCEEEEEECCGGGTTCCCTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTC
T ss_pred HHcCCeEEEEeCCcccccchhHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCc
Confidence 99999999998775 33321 257899999999999999998 3566788889999999999985332
Q ss_pred ---CcCCCCCCccEEEeccccccCCCCceEEEEe-ecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHH
Q 018172 170 ---TPITGAADHDIMLFTLSKCTGHAGSRIGWAL-VKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFE 245 (360)
Q Consensus 170 ---~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 245 (360)
....+..++++++.|+||.++++|+|+||++ + ++++++.+..... +++.|.+.|.++.++++. ..+++
T Consensus 196 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~-----~~~~~ 267 (364)
T 1lc5_A 196 TGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNS-DDAAMARMRRQQM--PWSVNALAALAGEVALQD-----SAWQQ 267 (364)
T ss_dssp CCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECC-CHHHHHHHHHHSC--TTCSCHHHHHHHHHGGGC-----HHHHH
T ss_pred cchhhHhccCCCEEEEEECchhhcCCccceEEEEEC-CHHHHHHHHHhCC--CCCCCHHHHHHHHHHHhC-----cHHHH
Confidence 1222456789999999999999999999999 7 8999999887653 568899999999988873 27899
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCCCC-CC
Q 018172 246 YGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRFGA-DA 323 (360)
Q Consensus 246 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~~-~~ 323 (360)
+.++.++++++++.+.|++++++.+.. +.++|+|+++++. ..+.+.|.++||.++||..|+. .+
T Consensus 268 ~~~~~~~~~~~~l~~~L~~~~~~~~~~--------------~~g~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~ 333 (364)
T 1lc5_A 268 ATWHWLREEGARFYQALCQLPLLTVYP--------------GRANYLLLRCEREDIDLQRRLLTQRILIRSCANYPGLDS 333 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTEEECC--------------CSSSEEEEEESCTTCCHHHHHHTTTEECEECTTSTTCCT
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCEECC--------------CCCeEEEEECCCcHHHHHHHHHHCCcEEeeCcccCCCCC
Confidence 999999999999999999886555432 2334677777653 4566777788999999998853 46
Q ss_pred CeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 324 KYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 324 ~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
+++|+|++ +++++++++++|++++++.
T Consensus 334 ~~iRis~~-~~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 334 RYYRVAIR-SAAQNERLLAALRNVLTGI 360 (364)
T ss_dssp TEEEEECC-CHHHHHHHHHHHHHHC---
T ss_pred CEEEEEeC-CHHHHHHHHHHHHHHhhcc
Confidence 79999984 6888999999999988654
No 52
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=2.8e-36 Score=282.24 Aligned_cols=288 Identities=15% Similarity=0.207 Sum_probs=232.8
Q ss_pred HHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 39 PELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 39 ~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
.++++++++++.. .|.++.+ ++|++|+|++++++.++..++++||+ |+++.|+|..+...++..|.+++.++.+
T Consensus 62 ~~~~~~l~~~l~~~~g~~~~~-~~v~~~~g~~~a~~~~~~~l~~~gd~----vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 136 (383)
T 3kax_A 62 ENIGDIICNWTKKQYNWDIQK-EWIVFSAGIVPALSTSIQAFTKENES----VLVQPPIYPPFFEMVTTNNRQLCVSPLQ 136 (383)
T ss_dssp TTHHHHHHHHHHHHHCCCCCG-GGEEEESCHHHHHHHHHHHHCCTTCE----EEECSSCCHHHHHHHHHTTCEEEECCCE
T ss_pred HHHHHHHHHHHHHHhCCCCCh-hhEEEcCCHHHHHHHHHHHhCCCCCE----EEEcCCCcHHHHHHHHHcCCEEEeccce
Confidence 7888888887653 3544444 58999999999999999999999998 9999999999999999999999988865
Q ss_pred cc-c---ccc-------CCCeeEEEEcCCCCCCcccch-H---HHHHHhhhcCcEEEEeecccCCCC-----CcCCCC--
Q 018172 118 AN-T---FDK-------NNGAYIEVVNSPNNPDGTIRE-A---VLAKVNRSAEGKLIHDLAYYWPQY-----TPITGA-- 175 (360)
Q Consensus 118 ~~-~---~~~-------~~~~~~i~~~~p~NPtG~~~~-~---~~~~~~~~~~~~li~D~ay~~~~~-----~~~~~~-- 175 (360)
.+ + ++. ++++++|++++||||||.+++ + .+.++|+++|+++|+|++|.+..+ .++...
T Consensus 137 ~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 216 (383)
T 3kax_A 137 KQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSE 216 (383)
T ss_dssp EETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCH
T ss_pred ecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCc
Confidence 32 1 221 468999999999999999988 2 445668889999999999985322 222221
Q ss_pred --CCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhcc-ccCChHHHHHHHHHhcccCCCchhHHHHHHHHHH
Q 018172 176 --ADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGS-IGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMS 252 (360)
Q Consensus 176 --~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 252 (360)
.++++++.|+||.++++|+|+||++++++++++.+.......+ .+.+.+.|.++.++++. . ..++++.+++++
T Consensus 217 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~--~~~~~~~~~~~~ 292 (383)
T 3kax_A 217 ELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTE--C--NDWLNEIRFYIE 292 (383)
T ss_dssp HHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTT--C--HHHHHHHHHHHH
T ss_pred cccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHh--h--HHHHHHHHHHHH
Confidence 3778999999999999999999999866899999987765443 47899999999888873 1 378999999999
Q ss_pred HHHHHHHHHHHh-cCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHH-hhCeeeeCCCCCCC-CCCe
Q 018172 253 ERWNMLRQVIRQ-SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLR-AERIMARGGRRFGA-DAKY 325 (360)
Q Consensus 253 ~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~-~~gI~~~pg~~f~~-~~~~ 325 (360)
++++++.+.|++ ++++.+..+.+++ ++|++++. ...+.+.|. ++||.++||..|+. ..++
T Consensus 293 ~~~~~l~~~l~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~ 359 (383)
T 3kax_A 293 DNAKFACEYIKDHIPTLSVMKPEGSF-------------LLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYGLGGEEH 359 (383)
T ss_dssp HHHHHHHHHHHHHCTTCEECCCSBSS-------------EEEEECGGGCCCHHHHHHHHHHTSCEECEESGGGCTTCTTE
T ss_pred HHHHHHHHHHHhhCCCceEecCCceE-------------EEEEEccccCCCHHHHHHHHHhhCCEEeECchhhcCCCCCe
Confidence 999999999988 6767666555544 56676653 256666665 78999999998975 4689
Q ss_pred EEEEecCChHHHHHHHHHHHHHH
Q 018172 326 ARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 326 ~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
+|++++.++|++++++++|++++
T Consensus 360 iRi~~~~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 360 IGINIGCPRSVLEEILNRLRHTF 382 (383)
T ss_dssp EEEECSSCHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHh
Confidence 99999889999999999999876
No 53
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=1.9e-37 Score=302.32 Aligned_cols=304 Identities=16% Similarity=0.206 Sum_probs=234.2
Q ss_pred ccc-CCCCccccccHHHHHHHHHHHhhc--C-CCCCCCCcEEEcCChHHHHHHHHHh-----hcCCCCCCCceEEEeCCC
Q 018172 26 YLS-DMGNVCWFLVPELAEAINNLHHVV--D-NAVSDGRHIVIGTGSTQLYQAALYA-----LSSPGGPEPISVVSAAPY 96 (360)
Q Consensus 26 ~y~-~~~g~~~~~~~~lr~~la~~~~~~--~-~~~~~~~~i~~t~G~t~~l~~~~~~-----l~~~gd~~~~~vl~~~p~ 96 (360)
.|+ +..|. +++|+++++++... + ..+.++++|++|+|++++++.++.+ ++++||+ |+++.|+
T Consensus 132 ~y~~~~~g~-----~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~----Viv~~p~ 202 (533)
T 3f6t_A 132 NYPVPDRCL-----VNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDK----IAINEPI 202 (533)
T ss_dssp SCCSSSSCC-----HHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCE----EEEESSC
T ss_pred CCCCCcccH-----HHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhccCCcCE----EEEcCCC
Confidence 344 66777 99999999998654 3 4555556999999999999999998 7899998 9999999
Q ss_pred CCCcHHHHHHhCCeeeeecCCc---c--cccc-------CCCeeEEEEcCCCCCCcccchH----HHHHHhh-hcCcEEE
Q 018172 97 YSQYPAETDYLRSGLYKWDGDA---N--TFDK-------NNGAYIEVVNSPNNPDGTIREA----VLAKVNR-SAEGKLI 159 (360)
Q Consensus 97 ~~~~~~~~~~~g~~~~~~~~~~---~--~~~~-------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~-~~~~~li 159 (360)
|.++..+++..|++++.++++. + +++. ++++++|++++||||||.+++. .+.++|+ ++++++|
T Consensus 203 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li 282 (533)
T 3f6t_A 203 FTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMII 282 (533)
T ss_dssp CHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEE
T ss_pred cHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEE
Confidence 9999999999999999888753 1 2221 4689999999999999999983 4556777 5899999
Q ss_pred EeecccCCCC--CcCC-CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHH--------------------------
Q 018172 160 HDLAYYWPQY--TPIT-GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKM-------------------------- 210 (360)
Q Consensus 160 ~D~ay~~~~~--~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l-------------------------- 210 (360)
+|++|.+... .++. ...+++++++||||.+|++|+|+||+++++.++++.+
T Consensus 283 ~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~ 362 (533)
T 3f6t_A 283 SDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKM 362 (533)
T ss_dssp EECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGC
T ss_pred EcCCccccccCccCHhhcCCCCEEEEecCcccCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchh
Confidence 9999985322 2221 2346889999999999999999999999544333322
Q ss_pred ----------HHHHhhccccCChHHHHHHH----HHhccc--CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Q 018172 211 ----------TRFIELGSIGVSKESQLRAA----KILGIV--SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYP 274 (360)
Q Consensus 211 ----------~~~~~~~~~~~~~~~~~~~~----~~l~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 274 (360)
.......+.+.+.+.|.+++ +++..- .+....+++++++.++++++.+.+.|. ++ +....+.
T Consensus 363 ~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~~-~~~~~~~ 440 (533)
T 3f6t_A 363 KFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-AP-KDETDTN 440 (533)
T ss_dssp CHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-CC-CCCSTTB
T ss_pred hhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-CC-ccccCCC
Confidence 23334456678888998843 334200 022358999999999999999999997 53 4555555
Q ss_pred CcccccccccCCCCCCcccccCC-------------------ch-HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC-C
Q 018172 275 LEYCNFTGKFTNSHPGFAWLESK-------------------ED-EDCEKLLRAERIMARGGRRFGADAKYARVSMLS-R 333 (360)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~-------------------~~-~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~ 333 (360)
+++ |+|++++ +. +.+..+++++||.+.||+.|+...+++|||++. +
T Consensus 441 ~g~-------------~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a~~~ 507 (533)
T 3f6t_A 441 THY-------------YSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQANLP 507 (533)
T ss_dssp CCS-------------EEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESSSSC
T ss_pred ceE-------------EEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEeeCC
Confidence 555 5666553 22 566777888999999999998777899999986 9
Q ss_pred hHHHHHHHHHHHHHHhchhc
Q 018172 334 EEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 334 ~e~~~~~~~~l~~~~~~~~~ 353 (360)
++++++++++|.+++.+...
T Consensus 508 ~e~i~~~i~~L~~~l~~~~~ 527 (533)
T 3f6t_A 508 TEDYALIGKQVLELLKEYYE 527 (533)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987543
No 54
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=1.5e-36 Score=288.91 Aligned_cols=297 Identities=13% Similarity=0.130 Sum_probs=236.7
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCc---EEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRH---IVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY 100 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~---i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~ 100 (360)
...|++..|. +++|+++++++...+..+.+ ++ |++|+|+++++..++..++++||+ |+++.|+|..+
T Consensus 81 ~~~y~~~~g~-----~~lr~~ia~~~~~~~~~~~~-~~~~~i~~t~g~~~al~~~~~~l~~~gd~----Vl~~~p~y~~~ 150 (430)
T 2x5f_A 81 IFPYAPPQGI-----EELRDLWQQKMLRDNPELSI-DNMSRPIVTNALTHGLSLVGDLFVNQDDT----ILLPEHNWGNY 150 (430)
T ss_dssp TSSCCCTTCC-----HHHHHHHHHHHHHHCTTCCG-GGBCCCEEESHHHHHHHHHHHHHCCTTCE----EEEESSCCTHH
T ss_pred ccccCCCCCC-----HHHHHHHHHHHhccCcccCC-CccceEEEcCCchHHHHHHHHHHhCCCCE----EEEcCCcCccH
Confidence 4578888787 99999999998655533443 57 999999999999999999999998 99999999999
Q ss_pred HHHHHH-hCCeeeeecCCcc--cccc-------CC---CeeEEEEcCCCCCCcccch----HHHHHHhhh-----cCcEE
Q 018172 101 PAETDY-LRSGLYKWDGDAN--TFDK-------NN---GAYIEVVNSPNNPDGTIRE----AVLAKVNRS-----AEGKL 158 (360)
Q Consensus 101 ~~~~~~-~g~~~~~~~~~~~--~~~~-------~~---~~~~i~~~~p~NPtG~~~~----~~~~~~~~~-----~~~~l 158 (360)
...++. .|++++.++.+.+ +++. ++ +++++++++||||||.+++ +.+.++|++ +|+++
T Consensus 151 ~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~l 230 (430)
T 2x5f_A 151 KLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIA 230 (430)
T ss_dssp HHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEE
Confidence 999999 9999999887642 2322 12 7899999999999999998 356678998 99999
Q ss_pred EEeecccCCCC-----CcCC----CCCCc---cEEEeccccccCCCCceEEEEee--cCHHHHHHHHHHHhh----cccc
Q 018172 159 IHDLAYYWPQY-----TPIT----GAADH---DIMLFTLSKCTGHAGSRIGWALV--KDTEVARKMTRFIEL----GSIG 220 (360)
Q Consensus 159 i~D~ay~~~~~-----~~~~----~~~~~---~i~~~S~sK~~~~~G~r~G~~~~--~~~~~~~~l~~~~~~----~~~~ 220 (360)
|+||+|.+..+ .++. ...++ ++++.|+||.++++|+|+||+++ .++++++.+...... ...+
T Consensus 231 i~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 310 (430)
T 2x5f_A 231 VVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISS 310 (430)
T ss_dssp EEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSS
T ss_pred EEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCC
Confidence 99999985322 2221 23567 89999999999999999999997 368899988876654 5678
Q ss_pred CChHHHHHHHHHhc-ccCCCchhHHHHHHHHHHHHHHHHHHHHH----hcCCcccCCCCCcccccccccCCCCCCccccc
Q 018172 221 VSKESQLRAAKILG-IVSDDYPNFFEYGRRLMSERWNMLRQVIR----QSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLE 295 (360)
Q Consensus 221 ~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (360)
.|.+.|.++.++++ .. .+.+.+++.++.++++++++.+.|+ .. ++.+..+.+++ |+|++
T Consensus 311 ~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-g~~~~~~~~g~-------------~~~~~ 374 (430)
T 2x5f_A 311 GPLPTQSAVKHVLKNNK--QFDKEIEQNIQTLKERYEVTKEVVYADQYHS-HWQAYDFNSGY-------------FMAIK 374 (430)
T ss_dssp CCHHHHHHHHHHHHSCH--HHHHHHHHHHHHHHHHHHHHHHHHTCGGGTT-TEEECCCCBSS-------------EEEEE
T ss_pred CChHHHHHHHHHHccCh--HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CceeeCCCceE-------------EEEeC
Confidence 99999999999886 42 2235556699999999999999998 44 34444444333 67888
Q ss_pred CC--chHHHHHHHHh-hCeeeeCCCCCCCCCCeEEEEec-CChHHHHHHHHHHHHHHhch
Q 018172 296 SK--EDEDCEKLLRA-ERIMARGGRRFGADAKYARVSML-SREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 296 ~~--~~~~~~~~l~~-~gI~~~pg~~f~~~~~~~R~s~~-~~~e~~~~~~~~l~~~~~~~ 351 (360)
++ +...+.+.|.+ +||.++|| .++++|+|++ .++|++++++++|++++++.
T Consensus 375 ~~~~~~~~~~~~l~~~~gi~v~~g-----~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 375 VHDVDPEALRKHLIDKYSIGVIAL-----NATDIRIAFSCVEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp ESSSCHHHHHHHHHHHHCEECEEC-----SSSEEEEEGGGSCGGGHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCEEEecC-----CCCeEEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 76 33556666666 99999997 3679999998 58999999999999998653
No 55
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=3.9e-36 Score=282.03 Aligned_cols=292 Identities=15% Similarity=0.165 Sum_probs=237.4
Q ss_pred HHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 39 PELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 39 ~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
.++|++++++++ ..|.++++ ++|++|+|+++++..++..++++||+ |+++.|+|..+...++..|.+++.++.+
T Consensus 65 ~~l~~~la~~l~~~~g~~~~~-~~i~~~~g~~~a~~~~~~~l~~~gd~----vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 139 (391)
T 3dzz_A 65 AEYYKAVADWEEIEHRARPKE-DWCVFASGVVPAISAMVRQFTSPGDQ----ILVQEPVYNMFYSVIEGNGRRVISSDLI 139 (391)
T ss_dssp HHHHHHHHHHHHHHHSCCCCG-GGEEEESCHHHHHHHHHHHHSCTTCE----EEECSSCCHHHHHHHHHTTCEEEECCCE
T ss_pred HHHHHHHHHHHHHHhCCCCCH-HHEEECCCHHHHHHHHHHHhCCCCCe----EEECCCCcHHHHHHHHHcCCEEEEeeee
Confidence 899999999876 34555554 58999999999999999999999998 9999999999999999999999998874
Q ss_pred c-cc---ccc--------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC-----CCcCCC--
Q 018172 118 A-NT---FDK--------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ-----YTPITG-- 174 (360)
Q Consensus 118 ~-~~---~~~--------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~-----~~~~~~-- 174 (360)
. ++ ++. ++++++|++++||||||.+++ +.+.++|+++|+++|+|++|.+.. ..++..
T Consensus 140 ~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 219 (391)
T 3dzz_A 140 YENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVD 219 (391)
T ss_dssp EETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSC
T ss_pred ecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcC
Confidence 1 22 221 268999999999999999987 356678888999999999998532 222221
Q ss_pred --CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHh-hccccCChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 175 --AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIE-LGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 175 --~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
..++++++.|+||.+|++|+|+||++++++++++.+..... ....+.+.+.|.++.++++.. ..++++.++++
T Consensus 220 ~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~ 295 (391)
T 3dzz_A 220 WDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEG----HDWLRELKQVL 295 (391)
T ss_dssp TTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHC----HHHHHHHHHHH
T ss_pred ccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcc----HHHHHHHHHHH
Confidence 14577999999999999999999999944999999987754 344678889999998888742 37899999999
Q ss_pred HHHHHHHHHHHHh-cCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHH-HhhCeeeeCCCCCCC-CCC
Q 018172 252 SERWNMLRQVIRQ-SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLL-RAERIMARGGRRFGA-DAK 324 (360)
Q Consensus 252 ~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l-~~~gI~~~pg~~f~~-~~~ 324 (360)
+++++++.+.|++ ++++.+..+.+++ ++|++++. ...+.+.| +++||.++||..|+. .++
T Consensus 296 ~~~~~~l~~~l~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~ 362 (391)
T 3dzz_A 296 RDNFAYAREFLAKEVPEVKVLDSNASY-------------LAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRGNGHE 362 (391)
T ss_dssp HHHHHHHHHHHHHHCTTSEECCCCBSS-------------EEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGCTTGGG
T ss_pred HHHHHHHHHHHHhhCCCcEEeccCceE-------------EEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhCCCCCC
Confidence 9999999999998 6777766555544 56676653 25666666 589999999998875 468
Q ss_pred eEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 325 YARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 325 ~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
++|++++.+++++++++++|.+++++.+
T Consensus 363 ~iRis~~~~~~~i~~~l~~l~~~l~~~~ 390 (391)
T 3dzz_A 363 FVRINLACPKELVIDGMQRLKQGVLNLN 390 (391)
T ss_dssp EEEEECCSCHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 9999998899999999999999997643
No 56
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.1e-36 Score=280.07 Aligned_cols=288 Identities=16% Similarity=0.238 Sum_probs=228.9
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
...|+++.+ ++||++++++++. ++++|++|+|+++++.+++..+. ||+ |+++.|+|..+...
T Consensus 44 ~~~y~~~~~------~~lr~~la~~~~~------~~~~i~~t~g~~~al~~~~~~l~--gd~----Vi~~~p~~~~~~~~ 105 (350)
T 3fkd_A 44 IRHYPEPDA------GTLRQMLAKRNSV------DNNAILVTNGPTAAFYQIAQAFR--GSR----SLIAIPSFAEYEDA 105 (350)
T ss_dssp GGSCCCTTC------HHHHHHHHHHTTC------CGGGEEEESHHHHHHHHHHHHTT--TCE----EEEEESCCHHHHHH
T ss_pred HhcCCCCcH------HHHHHHHHHHhCc------CHHHEEEcCCHHHHHHHHHHHHC--CCE----EEEeCCCcHHHHHH
Confidence 445766553 8999999999985 55699999999999999999988 887 99999999999999
Q ss_pred HHHhCCeeeeecC-Cc-cccccCCCeeEEEEcCCCCCCcccch-HHHHHHhhhcC-cEEEEeecccCCCCC-----cCCC
Q 018172 104 TDYLRSGLYKWDG-DA-NTFDKNNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAE-GKLIHDLAYYWPQYT-----PITG 174 (360)
Q Consensus 104 ~~~~g~~~~~~~~-~~-~~~~~~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~-~~li~D~ay~~~~~~-----~~~~ 174 (360)
++..|++++.++. +. +++.. +++++|++++||||||.+++ +.+.++++..+ .++|+|++|.+.... ...+
T Consensus 106 ~~~~g~~~~~v~~~~~~~~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~ 184 (350)
T 3fkd_A 106 CRMYEHEVCFYPSNEDIGEADF-SNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIK 184 (350)
T ss_dssp HHHTTCEEEEEETTSCGGGSCC-TTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGT
T ss_pred HHHcCCeEEEEecCCccccCcc-CCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhh
Confidence 9999999999998 65 55655 67899999999999999999 45556555443 599999999853221 2224
Q ss_pred CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHH
Q 018172 175 AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSER 254 (360)
Q Consensus 175 ~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 254 (360)
..+++++++||||.++++|+|+||+++ ++++++.+..... .++.+.+.|.++.++++... .+.++.++.. ++
T Consensus 185 ~~~~~i~~~S~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~-~~ 256 (350)
T 3fkd_A 185 GRKNLVMVYSFSHAYGIPGLRIGYIVA-NKDFMKRVAAFST--PWAVNALAIEAAKFILIHPA----QFTLPIRKWQ-RN 256 (350)
T ss_dssp TCSSEEEEEESHHHHSCGGGCCEEEEC-CHHHHHHHHTTCC--TTCSCHHHHHHHHHHHHCTT----TTCCCHHHHH-HH
T ss_pred cCCCEEEEecCchhccCcchheEeEEe-CHHHHHHHHHhCC--CCCCCHHHHHHHHHHHhCHH----HHHHHHHHHH-HH
Confidence 667889999999999999999999999 8999999987654 46789999999999887421 2344444444 88
Q ss_pred HHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHh-hCeeeeCCCCCCC-CCCeEEEEe
Q 018172 255 WNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRA-ERIMARGGRRFGA-DAKYARVSM 330 (360)
Q Consensus 255 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~-~gI~~~pg~~f~~-~~~~~R~s~ 330 (360)
++++.+.|++++++.+.. +.++|+|+.++. ...+.+.|.+ +||.++||..|+. .++++|||+
T Consensus 257 ~~~l~~~L~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~ 322 (350)
T 3fkd_A 257 TVDFITALNRLDGVEVHP--------------SGTTFFLLRLKKGTAAELKKYMLEEYNMLIRDASNFRGLDESYVRITT 322 (350)
T ss_dssp HHHHHHHHHHSTTEEECC--------------CSSSEEEEEESSSCHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEEC
T ss_pred HHHHHHHHhcCCCcEECC--------------CCCcEEEEECCCCCHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEc
Confidence 899999999886665532 233466777764 3666677777 9999999998864 478999998
Q ss_pred cCChHHHHHHHHHHHHHHhchhc
Q 018172 331 LSREEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 331 ~~~~e~~~~~~~~l~~~~~~~~~ 353 (360)
+ +++++++++++|+++..+.-.
T Consensus 323 ~-~~~~~~~l~~al~~~~~~~~~ 344 (350)
T 3fkd_A 323 Q-RPAQNQLFIKALETFLEKYEG 344 (350)
T ss_dssp C-CHHHHHHHHHHHHHHHTC---
T ss_pred C-CHHHHHHHHHHHHHHHHHhcc
Confidence 4 788899999999999887643
No 57
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=6.1e-36 Score=281.00 Aligned_cols=290 Identities=14% Similarity=0.171 Sum_probs=231.5
Q ss_pred HH-HHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC
Q 018172 39 PE-LAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG 116 (360)
Q Consensus 39 ~~-lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 116 (360)
++ +|++++++++. +|..+++ ++|++|+|+++++..++..++++||+ |+++.|+|..+...++..|.+++.++.
T Consensus 66 ~~~lr~~la~~l~~~~g~~~~~-~~v~~t~g~~~al~~~~~~l~~~gd~----vl~~~p~y~~~~~~~~~~g~~~~~v~~ 140 (390)
T 1d2f_A 66 NDEFLAAIAHWFSTQHYTAIDS-QTVVYGPSVIYMVSELIRQWSETGEG----VVIHTPAYDAFYKAIEGNQRTVMPVAL 140 (390)
T ss_dssp CHHHHHHHHHHHHHHSCCCCCG-GGEEEESCHHHHHHHHHHHSSCTTCE----EEEEESCCHHHHHHHHHTTCEEEEEEC
T ss_pred hHHHHHHHHHHHHHhcCCCCCH-HHEEEcCCHHHHHHHHHHHhcCCCCE----EEEcCCCcHHHHHHHHHCCCEEEEeec
Confidence 78 99999999864 4555554 58999999999999999999999998 999999999999999999999998886
Q ss_pred Cccc----ccc-------C-CCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC-----CcCCCC
Q 018172 117 DANT----FDK-------N-NGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY-----TPITGA 175 (360)
Q Consensus 117 ~~~~----~~~-------~-~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~-----~~~~~~ 175 (360)
+.++ ++. + .++++|++++||||||.+++ +.+.++|+++|+++|+||+|.+..+ .++...
T Consensus 141 ~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 220 (390)
T 1d2f_A 141 EKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNV 220 (390)
T ss_dssp EECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGT
T ss_pred ccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHc
Confidence 5331 221 2 37899999999999999988 4567788889999999999986322 222221
Q ss_pred C-C-ccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHh-hccc-cCChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 176 A-D-HDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIE-LGSI-GVSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 176 ~-~-~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~-~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
. + .+. +.|+||.+|++|+|+||++++++++++.+..... ..++ +.+.+.|.++.++++.. ..++++.++.+
T Consensus 221 ~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~ 295 (390)
T 1d2f_A 221 ARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQG----APWLDALRIYL 295 (390)
T ss_dssp CCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC----HHHHHHHHHHH
T ss_pred chhhHhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcC----HHHHHHHHHHH
Confidence 1 1 144 9999999999999999999855889898887765 3444 78889998888888731 37899999999
Q ss_pred HHHHHHHHHHHHh-cCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHH-hhCeeeeCCCCCCC-CCC
Q 018172 252 SERWNMLRQVIRQ-SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLR-AERIMARGGRRFGA-DAK 324 (360)
Q Consensus 252 ~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~-~~gI~~~pg~~f~~-~~~ 324 (360)
+++++++.+.|++ ++++.+..+.+++ ++|+++++ ...+.+.|. ++||.++||..|+. .++
T Consensus 296 ~~~~~~l~~~L~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~ 362 (390)
T 1d2f_A 296 KDNLTYIADKMNAAFPELNWQIPQSTY-------------LAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRG 362 (390)
T ss_dssp HHHHHHHHHHHHHHCSSCCCCCCSBCS-------------EEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCGGGTT
T ss_pred HHHHHHHHHHHHhhCCCCEEecCCccE-------------EEEEEccccCCCHHHHHHHHHHHcCEEeeCccccCCCCCC
Confidence 9999999999998 6666655554443 56777653 355666666 68999999998863 467
Q ss_pred eEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 325 YARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 325 ~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
++|||++.+++++++++++|.+++.+.
T Consensus 363 ~~Ris~~~~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 363 FVRLNAGCPRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp EEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 999999888999999999999998754
No 58
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=3.2e-36 Score=284.40 Aligned_cols=298 Identities=19% Similarity=0.217 Sum_probs=239.4
Q ss_pred ccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHH
Q 018172 27 LSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETD 105 (360)
Q Consensus 27 y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~ 105 (360)
|++..|. +++|+++++++.. +|.++++ ++|++|+|+++++..++..++++||+ |+++.|+|..+...++
T Consensus 71 y~~~~~~-----~~l~~~la~~~~~~~g~~~~~-~~v~~t~g~t~a~~~~~~~~~~~gd~----vl~~~p~~~~~~~~~~ 140 (407)
T 2zc0_A 71 YTPANGI-----PELREELAAFLKKYDHLEVSP-ENIVITIGGTGALDLLGRVLIDPGDV----VITENPSYINTLLAFE 140 (407)
T ss_dssp CCCTTCC-----HHHHHHHHHHHHHHSCCCCCG-GGEEEESHHHHHHHHHHHHHCCTTCE----EEEEESCCHHHHHHHH
T ss_pred CCCCCCC-----HHHHHHHHHHHHHhcCCCCCc-ceEEEecCHHHHHHHHHHHhcCCCCE----EEEeCCChHHHHHHHH
Confidence 7777777 9999999999843 3444444 58999999999999999999999998 9999999999999999
Q ss_pred HhCCeeeeecCCcccccc-------C----C--CeeEE-EEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCC
Q 018172 106 YLRSGLYKWDGDANTFDK-------N----N--GAYIE-VVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWP 167 (360)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~-------~----~--~~~~i-~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~ 167 (360)
..|++++.++.+.++++. + + ++++| ++++|+||||.+++. .+.++|+++|+++|+|++|.+.
T Consensus 141 ~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 220 (407)
T 2zc0_A 141 QLGAKIEGVPVDNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFM 220 (407)
T ss_dssp TTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTS
T ss_pred HcCCEEEEcccCCCCCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCccc
Confidence 999999988865433221 2 3 68887 578999999999983 5678888899999999999853
Q ss_pred CC-----CcCC--CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCc
Q 018172 168 QY-----TPIT--GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 168 ~~-----~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
.+ .++. +..++++++.|+||.++ +|+|+||+++ ++++++.+.......+.+.+++.|.++.++++.. .+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 296 (407)
T 2zc0_A 221 RYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIA-EGEILKKVLMQKQPIDFCAPAISQYIALEYLKRG--YF 296 (407)
T ss_dssp BSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSCCEEEEC-CHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTT--HH
T ss_pred ccCCCCCCChhhcCCCCCEEEEcccccccC-CCcceEEEec-CHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcC--Cc
Confidence 22 1221 23357899999999999 9999999999 7999999988877677788999999999988732 23
Q ss_pred h-hHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhh-Ceeee
Q 018172 241 P-NFFEYGRRLMSERWNMLRQVIRQS-GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAE-RIMAR 314 (360)
Q Consensus 241 ~-~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~-gI~~~ 314 (360)
+ .++++.++.++++++++.+.|++. +++.+..|.++ +|+|+++++ ...+.+.|.++ ||.++
T Consensus 297 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~~l~~~~gi~v~ 363 (407)
T 2zc0_A 297 EKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAG-------------MFVMFFLPEGADGISFANELMEREGVVVV 363 (407)
T ss_dssp HHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBS-------------SEEEEECSTTCCHHHHHHHHHHHTCEECB
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCc-------------EEEEEEcCCCCCHHHHHHHHHHhCCeEEE
Confidence 3 567788999999999999999874 55554444433 378888864 25667777777 99999
Q ss_pred CCCCCCC---CCCeEEEEecC-ChHHHHHHHHHHHHHHhch
Q 018172 315 GGRRFGA---DAKYARVSMLS-REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 315 pg~~f~~---~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~ 351 (360)
||..|+. .++++||+++. +++++++++++|++++++.
T Consensus 364 ~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 404 (407)
T 2zc0_A 364 PGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKLYKEK 404 (407)
T ss_dssp CSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHHHHHH
T ss_pred CchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 9988853 36799999977 7999999999999998654
No 59
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=3.7e-36 Score=285.12 Aligned_cols=297 Identities=16% Similarity=0.164 Sum_probs=230.3
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|++..|. ++||+++++++.....+- ..++|++|+|+++++..++..++++||+ |+++.|+|..+...+
T Consensus 74 ~~y~~~~g~-----~~lr~~ia~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~~~gd~----Vl~~~p~~~~~~~~~ 143 (418)
T 3rq1_A 74 VGYAPIAGI-----PDFLCAAEKECFGNFRPE-GHIRSIATAGGTGGIHHLIHNYTEPGDE----VLTADWYWGAYRVIC 143 (418)
T ss_dssp HSCCCTTCC-----HHHHHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHSCTTCE----EEEESSCCTHHHHHH
T ss_pred CCCCCCCCh-----HHHHHHHHHHHhcccCcc-ccccEEECCchHHHHHHHHHHhcCCCCE----EEECCCCchhHHHHH
Confidence 468888887 999999999864322111 1238999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecCCcc--cccc-------C----CCee-EEEEcCC-CCCCcccch-H---HHHHHhh------hcCcEEE
Q 018172 105 DYLRSGLYKWDGDAN--TFDK-------N----NGAY-IEVVNSP-NNPDGTIRE-A---VLAKVNR------SAEGKLI 159 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~--~~~~-------~----~~~~-~i~~~~p-~NPtG~~~~-~---~~~~~~~------~~~~~li 159 (360)
+..|.+++.++.+.+ +++. + ++++ ++++++| |||||.+++ + .+.++|+ ++|+++|
T Consensus 144 ~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li 223 (418)
T 3rq1_A 144 SDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIG 223 (418)
T ss_dssp HHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEE
T ss_pred HHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEE
Confidence 999999999987433 2322 1 1455 7899999 999999998 3 3345565 7999999
Q ss_pred EeecccCCCCC-----cC----CCCCCc--cEEEeccccccCCCCceEEEEee--cCHHHHHHHHHHHhhc----cccCC
Q 018172 160 HDLAYYWPQYT-----PI----TGAADH--DIMLFTLSKCTGHAGSRIGWALV--KDTEVARKMTRFIELG----SIGVS 222 (360)
Q Consensus 160 ~D~ay~~~~~~-----~~----~~~~~~--~i~~~S~sK~~~~~G~r~G~~~~--~~~~~~~~l~~~~~~~----~~~~~ 222 (360)
+||+|.+..+. ++ .+..++ +++++||||.+|++|+|+||+++ +++++++.+....... ..+.+
T Consensus 224 ~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (418)
T 3rq1_A 224 IDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNIC 303 (418)
T ss_dssp EECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCC
T ss_pred EecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCc
Confidence 99999743221 11 122334 58899999999999999999987 3789999887765432 24588
Q ss_pred hHHHHHHHHHhcccC--CCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchH
Q 018172 223 KESQLRAAKILGIVS--DDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDE 300 (360)
Q Consensus 223 ~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (360)
.++|.++.++++... +.+..+++++++.++++++++.+.|+++ ++.+..+.+++ |+|+++++..
T Consensus 304 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-------------~~~~~~~~~~ 369 (418)
T 3rq1_A 304 RPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLPMLPYRGGF-------------FITIPTDSAN 369 (418)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCCCCCSSS-------------EEEEECTTHH
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCceE-------------EEEcCCCCHH
Confidence 899999988887321 1123455678899999999999999988 56655555554 6788777666
Q ss_pred HHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHHhch
Q 018172 301 DCEKLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 301 ~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~ 351 (360)
.+.+.|.++||.++|| ++++|||++. +++++++++++|++++++.
T Consensus 370 ~~~~~l~~~gi~v~~g------~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 415 (418)
T 3rq1_A 370 AICEELKKEHIYVIAL------ANGIRIAACGIPKCQMTGLAEKIYNAMKSL 415 (418)
T ss_dssp HHHHHHHHTTEECEEC------SSEEEEEGGGSCHHHHTTHHHHHHHHHHHT
T ss_pred HHHHHHHhCCEEEecC------CCCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 6677889999999996 4689999985 9999999999999998764
No 60
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=5.1e-36 Score=277.74 Aligned_cols=277 Identities=20% Similarity=0.227 Sum_probs=229.2
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
.+++|++++++++. ++++|++|+|++++++.++..++++||+ |+++.|+|..+...++..|++++.++.+
T Consensus 53 ~~~l~~~la~~~~~------~~~~i~~~~g~~~a~~~~~~~l~~~gd~----vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 122 (354)
T 3ly1_A 53 ILMLGNKLAAHHQV------EAPSILLTAGSSEGIRAAIEAYASLEAQ----LVIPELTYGDGEHFAKIAGMKVTKVKML 122 (354)
T ss_dssp HHHHHHHHHHHTTS------CGGGEEEESHHHHHHHHHHHHHCCTTCE----EEEESSSCTHHHHHHHHTTCEEEEECCC
T ss_pred hHHHHHHHHHHhCC------ChHHEEEeCChHHHHHHHHHHHhCCCCe----EEECCCCchHHHHHHHHcCCEEEEecCC
Confidence 39999999999985 5569999999999999999999999998 9999999999999999999999999876
Q ss_pred cc-cccc-------C--CCeeEEEEcCCCCCCcccch-HHHHHHhhh--cCcEEEEeecccCCCCC----cC---CCCC-
Q 018172 118 AN-TFDK-------N--NGAYIEVVNSPNNPDGTIRE-AVLAKVNRS--AEGKLIHDLAYYWPQYT----PI---TGAA- 176 (360)
Q Consensus 118 ~~-~~~~-------~--~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~--~~~~li~D~ay~~~~~~----~~---~~~~- 176 (360)
.+ +++. + +++++|++++||||||.+++ +.+.++++. +|+++|+|++|.+.... +. ....
T Consensus 123 ~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 202 (354)
T 3ly1_A 123 DNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGA 202 (354)
T ss_dssp TTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTC
T ss_pred CCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcC
Confidence 32 2221 2 68999999999999999998 444444443 99999999999853222 11 1233
Q ss_pred CccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHH
Q 018172 177 DHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWN 256 (360)
Q Consensus 177 ~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 256 (360)
+++++++|+||.+|++|+|+||+++ ++++++.+...... ++.|.+.|.++.++++ .. .++++.+++++++++
T Consensus 203 ~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~---~~--~~~~~~~~~~~~~~~ 274 (354)
T 3ly1_A 203 ENIILLKTFSKIHAMAGMRVGYAVA-HPTVIALMGRYVAG--EKINFSGVDAALASMN---DS--AFITYSKKSNDVSRQ 274 (354)
T ss_dssp SSEEEEEESSSTTCCGGGCCEEEEC-CHHHHHHHGGGTTC--SCCCHHHHHHHHHHTT---CH--HHHHHHHHHHHHHHH
T ss_pred CCEEEEeeChhhccChhhhheeeec-CHHHHHHHHHhcCC--CCCCHHHHHHHHHHhc---CH--HHHHHHHHHHHHHHH
Confidence 7889999999999999999999999 89999999877654 6889999999999887 32 789999999999999
Q ss_pred HHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChH
Q 018172 257 MLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-DEDCEKLLRAERIMARGGRRFGADAKYARVSMLSREE 335 (360)
Q Consensus 257 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e 335 (360)
++.+.|+++ ++.+.. +.++|+|+++++ ...+.+.|.++||.++ |..++ .++++|+|++ +++
T Consensus 275 ~l~~~l~~~-~~~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~~gi~v~-g~~~~-~~~~iRis~~-~~~ 336 (354)
T 3ly1_A 275 ILLKALEDL-KLPYLP--------------SEGNFVFHQLVVPLKDYQTHMADAGVLIG-RAFPP-ADNWCRISLG-TPQ 336 (354)
T ss_dssp HHHHHHHHH-TCCBCC--------------CCSSEEEEECSSCHHHHHHHHHHTTEECC-CCCTT-CTTEEEEECC-CHH
T ss_pred HHHHHHHHC-CCeECC--------------CCceEEEEECCCCHHHHHHHHHHCCEEEe-ecCCC-CCCEEEEEcC-CHH
Confidence 999999988 444332 334578888874 4777788888999999 77555 5789999985 889
Q ss_pred HHHHHHHHHHHHHhc
Q 018172 336 IFNIFLERLSAIQGG 350 (360)
Q Consensus 336 ~~~~~~~~l~~~~~~ 350 (360)
++++++++|++++++
T Consensus 337 ~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 337 EMQWVADTMREFRKK 351 (354)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999875
No 61
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=3e-36 Score=284.15 Aligned_cols=292 Identities=15% Similarity=0.105 Sum_probs=226.8
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEE--cCChHHHHHHHHHhhc---CCCCCCCceEEEeCCCC
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVI--GTGSTQLYQAALYALS---SPGGPEPISVVSAAPYY 97 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~--t~G~t~~l~~~~~~l~---~~gd~~~~~vl~~~p~~ 97 (360)
...|++..|. +++|++++++++. +|..+++ ++|++ |+|+++++++++..+. ++||+ |++++|+|
T Consensus 64 ~~~Y~~~~g~-----~~lr~~ia~~~~~~~~~~~~~-~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~----Vlv~~p~~ 133 (401)
T 7aat_A 64 DKEYLPIAGL-----ADFTRASAELALGENSEAFKS-GRYVTVQGISGTGSLRVGANFLQRFFKFSRD----VYLPKPSW 133 (401)
T ss_dssp CCCCCCTTCC-----HHHHHHHHHHHHCTTCHHHHT-TCEEEEEEEHHHHHHHHHHHHHHHHCTTCCE----EEEEESCC
T ss_pred ccCCCCCCCC-----HHHHHHHHHHhcCCCcccccc-CceEEEecCcchHHHHHHHHHHHHhccCCCE----EEEcCCCc
Confidence 3458887887 9999999999864 3444444 48977 9999999999887764 88998 99999999
Q ss_pred CCcHHHHHHhCCeeeeecCCc---ccccc----------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEE
Q 018172 98 SQYPAETDYLRSGLYKWDGDA---NTFDK----------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIH 160 (360)
Q Consensus 98 ~~~~~~~~~~g~~~~~~~~~~---~~~~~----------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~ 160 (360)
..+...++..|.+++.++.+. .+++. .++++++++++||||||.+++ +.+.++|+++|+++|+
T Consensus 134 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 213 (401)
T 7aat_A 134 GNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYF 213 (401)
T ss_dssp TTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEE
Confidence 999999999999999988642 22221 357899999999999999988 3556788889999999
Q ss_pred eecccCCCCCc-------C---CCCCCccEEEeccccccCCCCceEEEEee--cCHH----HHHHHHHHHhhccccCChH
Q 018172 161 DLAYYWPQYTP-------I---TGAADHDIMLFTLSKCTGHAGSRIGWALV--KDTE----VARKMTRFIELGSIGVSKE 224 (360)
Q Consensus 161 D~ay~~~~~~~-------~---~~~~~~~i~~~S~sK~~~~~G~r~G~~~~--~~~~----~~~~l~~~~~~~~~~~~~~ 224 (360)
||+|.+..+.. + ....+++++++||||+||++|+|+||+++ .+++ +.+.+.........+.+..
T Consensus 214 Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (401)
T 7aat_A 214 DMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMN 293 (401)
T ss_dssp EESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHH
T ss_pred ccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChH
Confidence 99998644321 1 24567899999999999999999999886 3555 5566666666667778888
Q ss_pred HHHHHHHHhccc--CCCchhHHHHHHHHHHHHHHHHHHHHHhcC---CcccCCCCCcccccccccCCCCCCcccccCCch
Q 018172 225 SQLRAAKILGIV--SDDYPNFFEYGRRLMSERWNMLRQVIRQSG---VFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED 299 (360)
Q Consensus 225 ~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
.|.++..+++.. ...+..++++.+++++++++++.+.|++++ .+....|.+++ |+|++++.
T Consensus 294 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~-------------~~~~~~~~- 359 (401)
T 7aat_A 294 GARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGM-------------FCFTGLKP- 359 (401)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSS-------------EEECCCCH-
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcce-------------EEecCCCH-
Confidence 888887777521 001136788999999999999999999873 23333343333 67877753
Q ss_pred HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHH
Q 018172 300 EDCEKLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQ 348 (360)
Q Consensus 300 ~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~ 348 (360)
+.+..+++++||.+.|+ +|+|++. +++++++++++|++++
T Consensus 360 ~~~~~ll~~~gi~v~~~---------~Ris~~~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 360 EQVERLTKEFSIYMTKD---------GRISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp HHHHHHHHHHCEECCTT---------CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEeccCC---------CeEEeccCChhhHHHHHHHHHHHh
Confidence 66777888999999763 6999976 7777999999999876
No 62
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=1.1e-35 Score=276.92 Aligned_cols=279 Identities=18% Similarity=0.235 Sum_probs=232.6
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
.+++|++++++++.. ++++|++|+|++++++.++..++++||+ |+++.|+|..+...++..|++++.++.+
T Consensus 69 ~~~l~~~la~~~g~~-----~~~~i~~~~g~t~a~~~~~~~~~~~gd~----Vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 139 (367)
T 3euc_A 69 SEALRAKLKEVMQVP-----AGMEVLLGNGSDEIISMLALAAARPGAK----VMAPVPGFVMYAMSAQFAGLEFVGVPLR 139 (367)
T ss_dssp HHHHHHHHHHHHTCC-----TTCEEEEEEHHHHHHHHHHHHTCCTTCE----EEEEESCSCCSCHHHHTTTCEEEEEECC
T ss_pred HHHHHHHHHHHhCCC-----CcceEEEcCCHHHHHHHHHHHHcCCCCE----EEEcCCCHHHHHHHHHHcCCeEEEecCC
Confidence 399999999999741 3458999999999999999999999998 9999999999999999999999999876
Q ss_pred cc-cccc-------CC-CeeEEEEcCCCCCCcccch----HHHHHHhhhc--CcEEEEeecccCCC---CCcCCCCCCcc
Q 018172 118 AN-TFDK-------NN-GAYIEVVNSPNNPDGTIRE----AVLAKVNRSA--EGKLIHDLAYYWPQ---YTPITGAADHD 179 (360)
Q Consensus 118 ~~-~~~~-------~~-~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~--~~~li~D~ay~~~~---~~~~~~~~~~~ 179 (360)
.+ .++. ++ ++++|++++||||||.+++ +.+.++|+++ |+++|+|++|.+.. ..+.....+++
T Consensus 140 ~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 219 (367)
T 3euc_A 140 ADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNL 219 (367)
T ss_dssp TTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTE
T ss_pred CCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCE
Confidence 53 2222 23 7899999999999999987 3455678888 99999999998532 22233556788
Q ss_pred EEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHH
Q 018172 180 IMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLR 259 (360)
Q Consensus 180 i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 259 (360)
+++.|+||. +++|+|+||+++ ++++++.+..... .++.|.+.|.++.++++. ..++++.+++++++++++.
T Consensus 220 i~~~s~sK~-~~~G~r~G~~~~-~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~-----~~~~~~~~~~~~~~~~~l~ 290 (367)
T 3euc_A 220 LVMRTVSKL-GLAGIRLGYVAG-DPQWLEQLDKVRP--PYNVNVLTEATALFALEH-----VAVLDEQAAQLRAERSRVA 290 (367)
T ss_dssp EEEEECCCT-TSCSCCEEEEEE-CHHHHHHHGGGCC--SSCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHH
T ss_pred EEEecchhh-cccccCceeeee-CHHHHHHHHHhCC--CCCCCHHHHHHHHHHhcC-----HHHHHHHHHHHHHHHHHHH
Confidence 999999999 889999999999 8999988876653 567899999999998873 3889999999999999999
Q ss_pred HHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCC-CCCeEEEEecCChHHHH
Q 018172 260 QVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGA-DAKYARVSMLSREEIFN 338 (360)
Q Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~-~~~~~R~s~~~~~e~~~ 338 (360)
+.|++++++.+. + +.++|+|+++++...+.+.|.++||.++||..|+. ..+++|+|++ ++++++
T Consensus 291 ~~l~~~~g~~~~-~-------------~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~i~ 355 (367)
T 3euc_A 291 EGMAAHGGVTVF-P-------------SAANFLLARVPDAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS-TPEENA 355 (367)
T ss_dssp HHHHTSTTCEEC-C-------------CSSSEEEEECSCHHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC-CHHHHH
T ss_pred HHHHhCCCcEEC-C-------------CCCeEEEEECCCHHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC-CHHHHH
Confidence 999998665532 2 23447888887557778888999999999988753 5789999985 899999
Q ss_pred HHHHHHHHHHh
Q 018172 339 IFLERLSAIQG 349 (360)
Q Consensus 339 ~~~~~l~~~~~ 349 (360)
+++++|++++.
T Consensus 356 ~~~~~l~~~l~ 366 (367)
T 3euc_A 356 QFLEAFAASLQ 366 (367)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHhc
Confidence 99999999875
No 63
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=2.6e-36 Score=284.60 Aligned_cols=293 Identities=20% Similarity=0.200 Sum_probs=221.9
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|++..|. ++||+++++++. .|. + ++++|++|+|+++++..++. ++++||+ |+++.|+|..+...+
T Consensus 69 ~~y~~~~g~-----~~lr~~la~~l~-~g~-~-~~~~v~~~~G~~~al~~~~~-~~~~gd~----Vl~~~p~y~~~~~~~ 135 (400)
T 3asa_A 69 RGYGPDFGL-----PALRQKLSEDFY-RGF-V-DAKEIFISDGAKVDLFRLLS-FFGPNQT----VAIQDPSYPAYLDIA 135 (400)
T ss_dssp CCCCCTTCC-----HHHHHHHHHTTS-TTS-S-CGGGEEEESCHHHHHHHHHH-HHCSSCE----EEEEESCCHHHHHHH
T ss_pred cCCCCCCCC-----HHHHHHHHHHHH-cCC-C-CHHHEEEccChHHHHHHHHH-HcCCCCE----EEECCCCcHHHHHHH
Confidence 457766676 999999999954 333 3 34689999999999998664 5578888 999999999999999
Q ss_pred HHhCCe-eeeecCCcc-ccccC----CCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeecccCCCC-----
Q 018172 105 DYLRSG-LYKWDGDAN-TFDKN----NGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLAYYWPQY----- 169 (360)
Q Consensus 105 ~~~g~~-~~~~~~~~~-~~~~~----~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ay~~~~~----- 169 (360)
+..|.+ ++.++.+.+ ++..+ +++++|++++||||||.+++. .+.++|+++|+++|+|++|.+...
T Consensus 136 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~ 215 (400)
T 3asa_A 136 RLTGAKEIIALPCLQENAFFPEFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLP 215 (400)
T ss_dssp HHTTCSEEEEEECCGGGTTCCCCCTTCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSC
T ss_pred HHcCCcceEecccchhcCcccChhhccCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCC
Confidence 999998 998887643 33321 578999999999999999983 456778889999999999984211
Q ss_pred CcCCCC---CCccEEEeccccccCCCCceEEEEeecCHHH-------HHHHHHHHhhc-cccCChHHHHHHHHHhcccCC
Q 018172 170 TPITGA---ADHDIMLFTLSKCTGHAGSRIGWALVKDTEV-------ARKMTRFIELG-SIGVSKESQLRAAKILGIVSD 238 (360)
Q Consensus 170 ~~~~~~---~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~-------~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~~~~ 238 (360)
.++... .++++++.|+||.+|++|+|+||+++ ++++ ++.+....... ..+.|.+.|.++.++++.
T Consensus 216 ~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--- 291 (400)
T 3asa_A 216 KSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVI-PQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSI--- 291 (400)
T ss_dssp SSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEEC-CTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH---
T ss_pred CchhhCCCCCCceEEEecchhhcCCcchheeEEee-ChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCc---
Confidence 122221 35689999999999999999999998 6666 56654332222 236899999999888872
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCccccc-CCch----HHHHHHHHhhCeee
Q 018172 239 DYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLE-SKED----EDCEKLLRAERIMA 313 (360)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~l~~~gI~~ 313 (360)
.++++.++.++++++++.+.|+++ ++.+..+.+ ++|+|++ +++. +.+..+++++||.+
T Consensus 292 ---~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v 354 (400)
T 3asa_A 292 ---LPQLEAIHYYRENSDLLRKALLAT-GFEVFGGEH-------------APYLWVKPTQANISDRDLFDFFLREYHIAI 354 (400)
T ss_dssp ---TTTCHHHHHHHHHHHHHHHHHHHT-TCEEEECSS-------------SSEEEEECCCTTCCTTTHHHHHHHHHSEEC
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCC-------------ceEEEEeccCCCCCHHHHHHHHHHhCCEEE
Confidence 256788899999999999999987 444433333 3478888 7642 34445556679999
Q ss_pred eCCCCCCC-CCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 314 RGGRRFGA-DAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 314 ~pg~~f~~-~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
.||..|+. .++++|||+..++|++++++++|++++++.
T Consensus 355 ~~g~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~ 393 (400)
T 3asa_A 355 TPGIGFGRSGSGFVRFSSLGKREDILAACERLQMAPALQ 393 (400)
T ss_dssp EEGGGGCGGGTTCEEEECCSCHHHHHHHHHHHHC-----
T ss_pred eChhHhCCCCCCEEEEEeeCCHHHHHHHHHHHHHHHHhh
Confidence 99998864 467999997679999999999999998764
No 64
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=2.9e-35 Score=276.15 Aligned_cols=287 Identities=14% Similarity=0.190 Sum_probs=232.3
Q ss_pred HHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 39 PELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 39 ~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
.++++++++++.. .|.++.+ ++|++|+|++++++.++..++++||+ |+++.|+|..+...++..|.+++.++.+
T Consensus 70 ~~~~~~l~~~l~~~~g~~~~~-~~v~~~~g~~~a~~~~~~~~~~~gd~----vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 144 (391)
T 4dq6_A 70 DSYNESIVNWLYRRHNWKIKS-EWLIYSPGVIPAISLLINELTKANDK----IMIQEPVYSPFNSVVKNNNRELIISPLQ 144 (391)
T ss_dssp HHHHHHHHHHHHHHHCCCCCG-GGEEEESCHHHHHHHHHHHHSCTTCE----EEECSSCCTHHHHHHHHTTCEEEECCCE
T ss_pred HHHHHHHHHHHHHHhCCCCcH-HHeEEcCChHHHHHHHHHHhCCCCCE----EEEcCCCCHHHHHHHHHcCCeEEeeeee
Confidence 8999999988653 4544444 58999999999999999999999998 9999999999999999999999998876
Q ss_pred --ccc---ccc-------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC-----CcCCCC-
Q 018172 118 --ANT---FDK-------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY-----TPITGA- 175 (360)
Q Consensus 118 --~~~---~~~-------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~-----~~~~~~- 175 (360)
.++ ++. ++ +++|++++|+||||.+++ +.+.++|+++|+++|+|++|.+..+ .++...
T Consensus 145 ~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 223 (391)
T 4dq6_A 145 KLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASIS 223 (391)
T ss_dssp ECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSC
T ss_pred ecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcC
Confidence 222 221 23 899999999999999987 3556778889999999999985322 122211
Q ss_pred ---CCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhh-ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 176 ---ADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIEL-GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 176 ---~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
.++++++.|+||.+|++|+|+||++++++++++.+...... ...+.+.+.|.++.++++. . ..++++.++++
T Consensus 224 ~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~--~~~~~~~~~~~ 299 (391)
T 4dq6_A 224 KEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNN--G--ESWLESFLEYL 299 (391)
T ss_dssp HHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH--C--HHHHHHHHHHH
T ss_pred ccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhc--h--HHHHHHHHHHH
Confidence 35779999999999999999999998556899998877543 3457888999998888873 2 37899999999
Q ss_pred HHHHHHHHHHHHh-cCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHHhh-CeeeeCCCCCCC-CCC
Q 018172 252 SERWNMLRQVIRQ-SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLRAE-RIMARGGRRFGA-DAK 324 (360)
Q Consensus 252 ~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~-gI~~~pg~~f~~-~~~ 324 (360)
+++++++.+.|++ ++++.+..+.+++ ++|++++. ...+.+.|.++ ||.++||..|+. ..+
T Consensus 300 ~~~~~~l~~~l~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~ 366 (391)
T 4dq6_A 300 ESNIDFAIKYINENMPKLKVRKPEGTY-------------LLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIGGSG 366 (391)
T ss_dssp HHHHHHHHHHHHHHCTTSEECCCSBSS-------------EEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCTTCTT
T ss_pred HHHHHHHHHHHHhhCCCCEecCCCccE-------------EEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCCCCCC
Confidence 9999999999988 5777766665544 56677753 26667777776 999999998975 468
Q ss_pred eEEEEecCChHHHHHHHHHHHHHH
Q 018172 325 YARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 325 ~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
++|++++.++|++++++++|.+++
T Consensus 367 ~iRis~~~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 367 YQRINLACPRSMLEEALIRIKNAI 390 (391)
T ss_dssp EEEEECCSCHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHHHHh
Confidence 999999889999999999999876
No 65
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=1.8e-36 Score=295.65 Aligned_cols=299 Identities=14% Similarity=0.166 Sum_probs=224.6
Q ss_pred ccccCCCCccccccHHHHHHHHHH-HhhcCC-C--CCCCCcEEEcCChHHHHHHHHHh-----hcCCCCCCCceEEEeCC
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNL-HHVVDN-A--VSDGRHIVIGTGSTQLYQAALYA-----LSSPGGPEPISVVSAAP 95 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~-~~~~~~-~--~~~~~~i~~t~G~t~~l~~~~~~-----l~~~gd~~~~~vl~~~p 95 (360)
..|+++.|. +++|+++++. +..++. . ..++++|++|+|+++++..++.. ++++||+ |++++|
T Consensus 132 ~~Y~~~~g~-----~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~----Vlv~~P 202 (546)
T 2zy4_A 132 CNYPVPPRM-----LNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDK----VAIGMP 202 (546)
T ss_dssp CSCCSSSSC-----CHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCE----EEEEES
T ss_pred CCCCCCcCC-----HHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcCCCCCE----EEEeCC
Confidence 469988887 8999998864 554432 1 22356999999999999999987 5789998 999999
Q ss_pred CCCCcHHHHHHh--CCeeeeecCCccc-ccc---------CCCeeEEEEcCCCCCCcccchH----HHHHHh--hhcCcE
Q 018172 96 YYSQYPAETDYL--RSGLYKWDGDANT-FDK---------NNGAYIEVVNSPNNPDGTIREA----VLAKVN--RSAEGK 157 (360)
Q Consensus 96 ~~~~~~~~~~~~--g~~~~~~~~~~~~-~~~---------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~--~~~~~~ 157 (360)
+|+.+...+... |++++.++.+.++ +.. ++++++|++++||||||.+++. .+.++| +++|++
T Consensus 203 ~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ 282 (546)
T 2zy4_A 203 VFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLM 282 (546)
T ss_dssp CCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCE
T ss_pred CCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcE
Confidence 999999886654 6888888766443 211 3578999999999999999983 345666 669999
Q ss_pred EEEeecccCCCC--CcCCC-CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHH-------------H-------
Q 018172 158 LIHDLAYYWPQY--TPITG-AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRF-------------I------- 214 (360)
Q Consensus 158 li~D~ay~~~~~--~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~-------------~------- 214 (360)
+|+||+|.+... .++.. ..++++++.||||.+|++|+|+||++++++++++.+.+. .
T Consensus 283 ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~ 362 (546)
T 2zy4_A 283 ILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVR 362 (546)
T ss_dssp EEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGG
T ss_pred EEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhcccccc
Confidence 999999995332 22211 246899999999999999999999999444477766321 1
Q ss_pred ----------------hhccccCChHHHHHHH-----HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCC
Q 018172 215 ----------------ELGSIGVSKESQLRAA-----KILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEY 273 (360)
Q Consensus 215 ----------------~~~~~~~~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 273 (360)
...+.+.+.+.|.+++ ++++. . +.+.+++++.++++++.+.+.|. .+ +....+
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~--~--~~~~~~~r~~~~~r~~~l~~~L~-~~-~~~~~~ 436 (546)
T 2zy4_A 363 SLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDE--A--DEYKHTLKQLIRRRETTLYRELG-MP-PLRDEN 436 (546)
T ss_dssp GCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCT--T--CHHHHHHHHHHHHHHHHHHGGGT-SS-CCCCTT
T ss_pred chhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhc--c--HHHHHHHHHHHHHHHHHHHHhcC-CC-cccCCC
Confidence 1223467888888743 33431 2 38999999999999999998885 42 222334
Q ss_pred CCcccccccccCCCCCCcccccCCc-------------------h-HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC-
Q 018172 274 PLEYCNFTGKFTNSHPGFAWLESKE-------------------D-EDCEKLLRAERIMARGGRRFGADAKYARVSMLS- 332 (360)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~-~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~- 332 (360)
.+++ |+|+++++ . +++.+++.++||.++||..|+..++++||+++.
T Consensus 437 ~~~~-------------~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~~~ 503 (546)
T 2zy4_A 437 AVDY-------------YTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLANL 503 (546)
T ss_dssp BCCS-------------EEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESSSS
T ss_pred CeeE-------------EEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEeccC
Confidence 4444 55665431 2 557889999999999999998767899999987
Q ss_pred ChHHHHHHHHHHHHHHhch
Q 018172 333 REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 333 ~~e~~~~~~~~l~~~~~~~ 351 (360)
+++++++++++|++++.+.
T Consensus 504 ~~e~i~~~~~~l~~~l~~~ 522 (546)
T 2zy4_A 504 NEYEYAAIGRALRKMADEL 522 (546)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 8999999999999998653
No 66
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=7.5e-36 Score=285.21 Aligned_cols=301 Identities=17% Similarity=0.218 Sum_probs=235.0
Q ss_pred ccccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCC--------------CCCce
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGG--------------PEPIS 89 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd--------------~~~~~ 89 (360)
..|++..|. ++||++++++++ .+|..+.+ ++|++|+|+++++++++..++++|| +
T Consensus 77 ~~y~~~~g~-----~~lr~~ia~~l~~~~g~~~~~-~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~---- 146 (444)
T 3if2_A 77 ANYSNPQGD-----SAFIDALVGFFNRHYDWNLTS-ENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKS---- 146 (444)
T ss_dssp HSCCCTTCC-----HHHHHHHHHHHHHHHCCCCCG-GGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEE----
T ss_pred hccCCCCCC-----HHHHHHHHHHHHhhcCCCCCH-HHEEEecCcHHHHHHHHHHHhCCCccccccccccccccce----
Confidence 458888887 999999999975 44666665 5899999999999999999998887 5
Q ss_pred EEEe-CCCCCCcHHH------HHHhCCeeeeecCCc-----------cccc-----cCCCeeEEEEcCCCCCCcccch--
Q 018172 90 VVSA-APYYSQYPAE------TDYLRSGLYKWDGDA-----------NTFD-----KNNGAYIEVVNSPNNPDGTIRE-- 144 (360)
Q Consensus 90 vl~~-~p~~~~~~~~------~~~~g~~~~~~~~~~-----------~~~~-----~~~~~~~i~~~~p~NPtG~~~~-- 144 (360)
|+++ .|+|..+... +...|.+++.++.+. +.+. .++++++|++++||||||.+++
T Consensus 147 vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~ 226 (444)
T 3if2_A 147 ILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDE 226 (444)
T ss_dssp EEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHH
T ss_pred EEEeCCCCccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHH
Confidence 7775 8999998874 344677877776543 3333 2467999999999999999998
Q ss_pred --HHHHHHhhhcCcEEEEeecccCCC----CCc-CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhc
Q 018172 145 --AVLAKVNRSAEGKLIHDLAYYWPQ----YTP-ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELG 217 (360)
Q Consensus 145 --~~~~~~~~~~~~~li~D~ay~~~~----~~~-~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~ 217 (360)
+.+.++|+++|+++|+|++|+.+. +.. .....++++++.||||. +++|+|+||+++ ++++++.+.......
T Consensus 227 ~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~-~~~l~~~~~~~~~~~ 304 (444)
T 3if2_A 227 EMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI-GLPGMRTGIIVA-DAKVIEAVSAMNAVV 304 (444)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT-TCGGGCCEEEEC-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCCCCEEEEechhhc-cCCCCceEEEEE-CHHHHHHHHHHHHhc
Confidence 345677888999999999998421 111 11346789999999996 779999999998 899999998888777
Q ss_pred cccCChHHHHHHHHHhcccCCCchhHHHH-HHHHHHHHHHHHHHHHHhc-CC--cccCCCCCcccccccccCCCCCCccc
Q 018172 218 SIGVSKESQLRAAKILGIVSDDYPNFFEY-GRRLMSERWNMLRQVIRQS-GV--FGLPEYPLEYCNFTGKFTNSHPGFAW 293 (360)
Q Consensus 218 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (360)
+++.+.+.|.++..+++. ..+..+..+ .++.++++++.+.+.|.+. +. +.+..+.+ ++|+|
T Consensus 305 ~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-------------g~~~~ 369 (444)
T 3if2_A 305 NLAPTRFGAAIATPLVAN--DRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEG-------------AIFLW 369 (444)
T ss_dssp HSSCCCHHHHHHHHHHHT--SHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCB-------------SSEEE
T ss_pred cCCCChHHHHHHHHHHHc--CchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCc-------------cEEEE
Confidence 788999999999998873 222344444 7778999999999998764 43 22333333 34788
Q ss_pred ccCCc----hHHHHHHHHhhCeeeeCCCCCCCC---------CCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 294 LESKE----DEDCEKLLRAERIMARGGRRFGAD---------AKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 294 ~~~~~----~~~~~~~l~~~gI~~~pg~~f~~~---------~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
++++. ...+.+.|.++||.++||+.|... .+++|||++.++|++++++++|.+++.+..
T Consensus 370 ~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~~ 441 (444)
T 3if2_A 370 LWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEVVRELY 441 (444)
T ss_dssp EEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 87764 266777888999999999988531 268999998899999999999999997654
No 67
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=3.8e-36 Score=285.38 Aligned_cols=292 Identities=14% Similarity=0.145 Sum_probs=225.7
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCC--cEEEcCChHHHHHHH--HHhhcCCCCCCCceEEEeCCCCCCc
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGR--HIVIGTGSTQLYQAA--LYALSSPGGPEPISVVSAAPYYSQY 100 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~--~i~~t~G~t~~l~~~--~~~l~~~gd~~~~~vl~~~p~~~~~ 100 (360)
..|++..|. +++|+++++++...+....+++ +|++|+|++++++.+ +..++++||+ |++++|+|.++
T Consensus 86 ~~Y~~~~g~-----~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~----Vlv~~p~~~~~ 156 (420)
T 4f4e_A 86 RGYLPIDGI-----AAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAK----VAISDPSWENH 156 (420)
T ss_dssp CCCCCTTCC-----HHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCC----EEEEESCCHHH
T ss_pred CCCCCCCCc-----HHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCE----EEEeCCCcHhH
Confidence 458888887 9999999999864322111234 799999999999999 4566899999 99999999999
Q ss_pred HHHHHHhCCeeeeecC-Cc--cccc-----c--C---CCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeec
Q 018172 101 PAETDYLRSGLYKWDG-DA--NTFD-----K--N---NGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLA 163 (360)
Q Consensus 101 ~~~~~~~g~~~~~~~~-~~--~~~~-----~--~---~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~a 163 (360)
...++..|++++.++. +. .+++ . + ++++++++++||||||.+++. .+.++|+++|+++|+|++
T Consensus 157 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~ 236 (420)
T 4f4e_A 157 RALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIA 236 (420)
T ss_dssp HHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEES
T ss_pred HHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccc
Confidence 9999999999999987 21 1221 1 2 678999999999999999882 456778889999999999
Q ss_pred ccCCCCC------c---CCCCCCccEEEeccccccCCCCceEEEEee--cCHHHHHH----HHHHHhhccccCChHHHHH
Q 018172 164 YYWPQYT------P---ITGAADHDIMLFTLSKCTGHAGSRIGWALV--KDTEVARK----MTRFIELGSIGVSKESQLR 228 (360)
Q Consensus 164 y~~~~~~------~---~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~--~~~~~~~~----l~~~~~~~~~~~~~~~~~~ 228 (360)
|.+..+. + +.+..+++++++||||.|+++|+|+||+++ +++++++. +.........+++.+.|.+
T Consensus 237 y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (420)
T 4f4e_A 237 YQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAI 316 (420)
T ss_dssp CTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHH
T ss_pred cccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHH
Confidence 9854332 1 113578899999999999999999999863 35666554 3333334556678899999
Q ss_pred HHHHhcccC--CCchhHHHHHHHHHHHHHHHHHHHHHhc---CCcccCCCCCcccccccccCCCCCCcccccCCchHHHH
Q 018172 229 AAKILGIVS--DDYPNFFEYGRRLMSERWNMLRQVIRQS---GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCE 303 (360)
Q Consensus 229 ~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (360)
+.+++.... +.++.++++++++++++++.+.+.|+++ +++.+..+.+++ |+|+.++. +.+.
T Consensus 317 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~-------------~~~~~~~~-~~~~ 382 (420)
T 4f4e_A 317 VAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGM-------------FSYSGLTS-AQVD 382 (420)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSS-------------EEECCCCH-HHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccE-------------EEEeCCCH-HHHH
Confidence 888777310 1124778999999999999999999988 244444444443 78888754 7788
Q ss_pred HHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHH
Q 018172 304 KLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQ 348 (360)
Q Consensus 304 ~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~ 348 (360)
+++.++||.++|+ .|+|++. +++++++++++|++++
T Consensus 383 ~~l~~~gI~v~~~---------~Ris~~~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 383 RLREEFGIYAVST---------GRICVAALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp HHHHHHCEECCTT---------SEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred HHHHhCCEEecCC---------CeEEEecCCHHHHHHHHHHHHHHh
Confidence 8899999999984 2999987 8888999999999886
No 68
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=1.5e-35 Score=280.50 Aligned_cols=294 Identities=15% Similarity=0.180 Sum_probs=224.0
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|++..|. +++|+++++++.....+. ..++|++|+|+++++..++..++++||+ |+++.|+|..+...+
T Consensus 73 ~~Y~~~~g~-----~~lr~~la~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~~~~~gd~----Vl~~~p~~~~~~~~~ 142 (413)
T 3t18_A 73 ASYAPIEGE-----KDYRKIVIDTLFGPYKPE-GYISAIATPGGTGAIRSAIFSYLDEGDP----LICHDYYWAPYRKIC 142 (413)
T ss_dssp HSCCCTTCC-----HHHHHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHCCSSCE----EEEESSCCTHHHHHH
T ss_pred cCcCCCCCC-----HHHHHHHHHHHhcccCcc-ccCcEEEcCccHHHHHHHHHHhcCCCCE----EEECCCCcccHHHHH
Confidence 458888887 999999999763322111 2348999999999999999999999998 999999999999999
Q ss_pred HHhCCeeeeecCC-cc-cccc-------CC----Cee-EEEEcCC-CCCCcccch-H---HHHHHhh------hcCcEEE
Q 018172 105 DYLRSGLYKWDGD-AN-TFDK-------NN----GAY-IEVVNSP-NNPDGTIRE-A---VLAKVNR------SAEGKLI 159 (360)
Q Consensus 105 ~~~g~~~~~~~~~-~~-~~~~-------~~----~~~-~i~~~~p-~NPtG~~~~-~---~~~~~~~------~~~~~li 159 (360)
+..|++++.++.+ .+ +++. ++ +++ ++++++| |||||.+++ + .+.++|+ ++|+++|
T Consensus 143 ~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li 222 (413)
T 3t18_A 143 EEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLI 222 (413)
T ss_dssp HHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEE
T ss_pred HHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEE
Confidence 9999999999873 33 3322 11 567 7888999 999999998 3 3345565 7999999
Q ss_pred EeecccCCCC-----CcCC----CCCCc--cEEEeccccccCCCCceEEEEeec--CHHHHHHHHHHHhhcc----ccCC
Q 018172 160 HDLAYYWPQY-----TPIT----GAADH--DIMLFTLSKCTGHAGSRIGWALVK--DTEVARKMTRFIELGS----IGVS 222 (360)
Q Consensus 160 ~D~ay~~~~~-----~~~~----~~~~~--~i~~~S~sK~~~~~G~r~G~~~~~--~~~~~~~l~~~~~~~~----~~~~ 222 (360)
+||+|.+..+ .++. +..++ +++++||||.|+++|+|+||+++. ++++++.+...+.... .+.+
T Consensus 223 ~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (413)
T 3t18_A 223 VDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGT 302 (413)
T ss_dssp EECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCC
T ss_pred EecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCC
Confidence 9999974221 1221 22334 488999999999999999999873 6899998877654322 4578
Q ss_pred hHHHHHHHHHhcccCC-CchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHH
Q 018172 223 KESQLRAAKILGIVSD-DYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDED 301 (360)
Q Consensus 223 ~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (360)
.++|.++.++++...- .+..++++.++.++++++++.+.|+++ ++.+..+.+++ |+|+++.+...
T Consensus 303 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~-------------~~~~~~~~~~~ 368 (413)
T 3t18_A 303 HAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKEN-KLTMIPYFGGF-------------FTFIPTDKAFD 368 (413)
T ss_dssp HHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCSSS-------------CEEEECSCHHH
T ss_pred hHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCccCCCceE-------------EEEeCCCCHHH
Confidence 8999888887762100 033567788899999999999999988 56665555554 67887766666
Q ss_pred HHHHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHHhch
Q 018172 302 CEKLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 302 ~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~ 351 (360)
+.+.|.++||.++|| ++++||+++. +++++ +++|.+++.+.
T Consensus 369 ~~~~l~~~gv~v~~g------~~~iRis~~~~~~~~~---l~~l~~~l~~~ 410 (413)
T 3t18_A 369 IVKDLEKENIFTIPS------AKGIRVAICGVGEEKI---PKLVQRLAFYT 410 (413)
T ss_dssp HHHHHHHTTEECEEC------SSEEEECTTTSCGGGH---HHHHHHHHHHH
T ss_pred HHHHHHhCCEEEecC------CCceEEEEeeCCHHHH---HHHHHHHHHHH
Confidence 667889999999996 4689999976 66665 77777777654
No 69
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=8.3e-35 Score=270.22 Aligned_cols=274 Identities=18% Similarity=0.255 Sum_probs=226.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCCc
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDA 118 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 118 (360)
+++|++++++++. ++++|++|+|++++++.++..+ |+ |+++.|+|..+...++..|.+++.++.+.
T Consensus 64 ~~l~~~la~~~~~------~~~~i~~~~g~t~al~~~~~~~----d~----vi~~~~~~~~~~~~~~~~g~~~~~~~~~~ 129 (361)
T 3ftb_A 64 RRLNKSIENYLKL------KDIGIVLGNGASEIIELSISLF----EK----ILIIVPSYAEYEINAKKHGVSVVFSYLDE 129 (361)
T ss_dssp HHHHHHHHHHHTC------CSCEEEEESSHHHHHHHHHTTC----SE----EEEEESCCTHHHHHHHHTTCEEEEEECCT
T ss_pred HHHHHHHHHHhCC------CcceEEEcCCHHHHHHHHHHHc----Cc----EEEecCChHHHHHHHHHcCCeEEEeecCc
Confidence 9999999999975 4569999999999999999988 66 99999999999999999999999998775
Q ss_pred c-cccc-------CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC------CcCCCCCCccE
Q 018172 119 N-TFDK-------NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY------TPITGAADHDI 180 (360)
Q Consensus 119 ~-~~~~-------~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~------~~~~~~~~~~i 180 (360)
+ ++.. ++ ++++++++||||||.+++ +.+.++|+++|+++|+|++|.+... .......++++
T Consensus 130 ~~~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i 208 (361)
T 3ftb_A 130 NMCIDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLF 208 (361)
T ss_dssp TSCCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEE
T ss_pred ccCCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEE
Confidence 4 3322 34 899999999999999988 2455677789999999999985332 12234567889
Q ss_pred EEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHH
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQ 260 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 260 (360)
+++|+||.++++|+|+||+++.++++++.+..... .++.|.+.|.++.++++ + ..++++.+++++++++++.+
T Consensus 209 ~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~---~--~~~~~~~~~~~~~~~~~l~~ 281 (361)
T 3ftb_A 209 IIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQN--PWNINCFAEMAAINCLK---D--TNYIEESLLWIKKERKRFIE 281 (361)
T ss_dssp EEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSC--TTCSCHHHHHHHHHTSS---C--HHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCC--CCCCCHHHHHHHHHHhc---C--HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999338999999987654 46888999999988887 2 38899999999999999999
Q ss_pred HHHhcCCcc-cCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCCCCC-CCCeEEEEecCChHH
Q 018172 261 VIRQSGVFG-LPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRRFGA-DAKYARVSMLSREEI 336 (360)
Q Consensus 261 ~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~f~~-~~~~~R~s~~~~~e~ 336 (360)
.|++++++. +..+. ++|+|+++++ ...+.+.|.++||.++||..|+. .++++|++++ ++++
T Consensus 282 ~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~ 346 (361)
T 3ftb_A 282 ELNKIGFIKRVFSPH--------------ANFVLCRLENISGEKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAIK-DEKK 346 (361)
T ss_dssp HHHHSSSEEEEECCS--------------SSEEEEEESSSCHHHHHHHHHTTTEECEECTTSTTCCTTEEEEECC-CHHH
T ss_pred HHHhCCCCceecCCC--------------CeEEEEEcCCCCHHHHHHHHHHCCeEEeeCccCCCCCCCEEEEEcC-CHHH
Confidence 999987665 43332 3467777764 36777788888999999998864 4789999985 7778
Q ss_pred HHHHHHHHHHHHh
Q 018172 337 FNIFLERLSAIQG 349 (360)
Q Consensus 337 ~~~~~~~l~~~~~ 349 (360)
+++++++|+++.+
T Consensus 347 ~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 347 NTKFLRALKGVEN 359 (361)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 8888888888764
No 70
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=1.9e-35 Score=278.18 Aligned_cols=292 Identities=15% Similarity=0.082 Sum_probs=224.6
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCC--cEEEcCChHHHHHHHH--HhhcCCCCCCCceEEEeCCCCCCc
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGR--HIVIGTGSTQLYQAAL--YALSSPGGPEPISVVSAAPYYSQY 100 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~--~i~~t~G~t~~l~~~~--~~l~~~gd~~~~~vl~~~p~~~~~ 100 (360)
..|++..|. +++|++++++++..+....+++ +|++|+|++++++.++ ..++++||+ |+++.|+|..+
T Consensus 64 ~~y~~~~g~-----~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~----vl~~~p~~~~~ 134 (397)
T 3fsl_A 64 SLYLPMEGL-----NCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESG----VWVSDPTWENH 134 (397)
T ss_dssp CCCCCTTCC-----HHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCC----EEEESSCCHHH
T ss_pred ccCCCCCch-----HHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCe----EEEeCCCchhH
Confidence 458877887 9999999999864322111245 7999999999999994 456789998 99999999999
Q ss_pred HHHHHHhCCeeeeecCC---cccccc-------C---CCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeec
Q 018172 101 PAETDYLRSGLYKWDGD---ANTFDK-------N---NGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLA 163 (360)
Q Consensus 101 ~~~~~~~g~~~~~~~~~---~~~~~~-------~---~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~a 163 (360)
...++..|.+++.++.+ ..+++. . ++++++++++||||||.+++. .+.++|+++|+++|+||+
T Consensus 135 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~ 214 (397)
T 3fsl_A 135 VAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIA 214 (397)
T ss_dssp HHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecC
Confidence 99999999999999872 212221 2 578899999999999999883 566788889999999999
Q ss_pred ccCCCCC------c---CCCCCCccEEEeccccccCCCCceEEEEee--cCHHHHHHHHH----HHhhccccCChHHHHH
Q 018172 164 YYWPQYT------P---ITGAADHDIMLFTLSKCTGHAGSRIGWALV--KDTEVARKMTR----FIELGSIGVSKESQLR 228 (360)
Q Consensus 164 y~~~~~~------~---~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~--~~~~~~~~l~~----~~~~~~~~~~~~~~~~ 228 (360)
|.+..+. + +.+..+++++++||||++|++|+|+||+++ .+.++++.+.. .......+.+.++|.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (397)
T 3fsl_A 215 YQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQV 294 (397)
T ss_dssp CTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHH
T ss_pred chhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHH
Confidence 9864332 1 114578899999999999999999999974 35666654432 2223445668899999
Q ss_pred HHHHhcccC--CCchhHHHHHHHHHHHHHHHHHHHHHhcC---CcccCCCCCcccccccccCCCCCCcccccCCchHHHH
Q 018172 229 AAKILGIVS--DDYPNFFEYGRRLMSERWNMLRQVIRQSG---VFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCE 303 (360)
Q Consensus 229 ~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (360)
+.+++.... ..+..++++.+++++++++++.+.|++++ ++.+..+.++ +|+|++++. +.+.
T Consensus 295 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~-------------~~~~~~~~~-~~~~ 360 (397)
T 3fsl_A 295 VAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRG-------------MFSYTGLSA-AQVD 360 (397)
T ss_dssp HHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCS-------------SEEECCCCH-HHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCce-------------EEEecCCCH-HHHH
Confidence 888776210 01237789999999999999999999884 3444333333 478888754 6788
Q ss_pred HHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHH
Q 018172 304 KLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQ 348 (360)
Q Consensus 304 ~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~ 348 (360)
++|+++||.+.||. |+|++. +++++++++++|++++
T Consensus 361 ~~l~~~gi~v~~g~---------Ris~~~~~~~~i~~~~~~l~~~l 397 (397)
T 3fsl_A 361 RLREEFGVYLIASG---------RMCVAGLNTANVQRVAKAFAAVM 397 (397)
T ss_dssp HHHHTTCEECCTTC---------EEEGGGCCTTTHHHHHHHHHHHC
T ss_pred HHHHhCCEEECCCC---------eEEEEecCHhhHHHHHHHHHhhC
Confidence 88999999999863 999987 8888999999998764
No 71
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=4.5e-35 Score=280.23 Aligned_cols=295 Identities=14% Similarity=0.067 Sum_probs=229.4
Q ss_pred cccccCCCCccccccHHHHHHHHHHH-hhcCCCCCCCCcEEE--cCChHHHHHH--HHHhhcCCCCCCCceEEEeCCCCC
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLH-HVVDNAVSDGRHIVI--GTGSTQLYQA--ALYALSSPGGPEPISVVSAAPYYS 98 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~-~~~~~~~~~~~~i~~--t~G~t~~l~~--~~~~l~~~gd~~~~~vl~~~p~~~ 98 (360)
...|.+..|. +++|+++++++ +....+++ +++|++ |+|+++++++ .+..++++||+ |++++|+|.
T Consensus 87 ~~~Y~~~~G~-----~~lr~~ia~~l~g~~~~~~~-~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~----Vlv~~p~~~ 156 (448)
T 3meb_A 87 NKEYPPVAGF-----PLFLEAAQFLMFGKDSKAAQ-EGRIASCQSLSGTGSLHIGFEFLHLWMPKAE----FYMPSTTWP 156 (448)
T ss_dssp CCSCCCTTCC-----HHHHHHHHHHHHCTTCHHHH-TTCEEEEEESHHHHHHHHHHHHHHHHCTTCC----EEEESSCCT
T ss_pred CCCCCCCcch-----HHHHHHHHHHhcCCCccccC-cCcEEEEECCcHHHHHHHHHHHHHHhCCCCE----EEECCCCCH
Confidence 3458888887 99999999987 53110011 458999 9999999988 45667889998 999999999
Q ss_pred CcHHHHH----HhCCeeeeecC-Ccc---cccc-------C---CCeeEEEEcCCCCCCcccchH----HHHHHhhhcCc
Q 018172 99 QYPAETD----YLRSGLYKWDG-DAN---TFDK-------N---NGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEG 156 (360)
Q Consensus 99 ~~~~~~~----~~g~~~~~~~~-~~~---~~~~-------~---~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~ 156 (360)
++..+++ ..|++++.++. +.+ +++. + ++++++++++||||||.+++. .+.++|+++|+
T Consensus 157 ~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~ 236 (448)
T 3meb_A 157 NHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKH 236 (448)
T ss_dssp HHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCC
Confidence 9999999 99999999987 443 2221 1 357888999999999999982 46678888999
Q ss_pred EEEEeecccCCCCCc----------CCCCCCccEEEeccccccCCCCceEEEE--ee--------cCH----HHHHHHHH
Q 018172 157 KLIHDLAYYWPQYTP----------ITGAADHDIMLFTLSKCTGHAGSRIGWA--LV--------KDT----EVARKMTR 212 (360)
Q Consensus 157 ~li~D~ay~~~~~~~----------~~~~~~~~i~~~S~sK~~~~~G~r~G~~--~~--------~~~----~~~~~l~~ 212 (360)
++|+|++|.+..+.. +.....+++++.||||+||++|+|+||+ ++ +++ ++++.+..
T Consensus 237 ~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~ 316 (448)
T 3meb_A 237 IAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTL 316 (448)
T ss_dssp EEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHH
Confidence 999999998643322 1134678899999999999999999998 65 455 67777777
Q ss_pred HHhhccccCChHHHHHHHHHhcccC--CCchhHHHHHHHHHHHHHHHHHHHHHhc--CC------cccCCCCCccccccc
Q 018172 213 FIELGSIGVSKESQLRAAKILGIVS--DDYPNFFEYGRRLMSERWNMLRQVIRQS--GV------FGLPEYPLEYCNFTG 282 (360)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~------~~~~~~~~~~~~~~~ 282 (360)
.......+++.+.|.++.++++... ..+..++++++++++++++++.+.|+++ ++ +....+.+
T Consensus 317 ~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~------- 389 (448)
T 3meb_A 317 QIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAI------- 389 (448)
T ss_dssp HHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCC-------
T ss_pred HHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCc-------
Confidence 6666777889999999999887310 1122568899999999999999999987 22 22223333
Q ss_pred ccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHHhc
Q 018172 283 KFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~ 350 (360)
++|+|+.++. +.+..+++++||.+.||+ .|||++. +++++++++++|.+++++
T Consensus 390 ------g~~~~~~~~~-~~~~~ll~~~gV~v~~G~--------gRis~a~~~~~~i~~~~~~l~~~l~~ 443 (448)
T 3meb_A 390 ------GMFTFTGLTP-EHVDYLKEKWSIYLVKAG--------GRMSMCGLTESNCDYVAEAIHDAVTK 443 (448)
T ss_dssp ------SSEEECCCCH-HHHHHHHHHHCEEECSGG--------GEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred ------eEEEecCCCH-HHHHHHHHhCCEEEeCCC--------cEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 3477887753 777778889999999975 2999987 888899999999999974
No 72
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=3.8e-35 Score=278.56 Aligned_cols=289 Identities=18% Similarity=0.253 Sum_probs=233.3
Q ss_pred HHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 39 PELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 39 ~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
.++++++++++. ..+.++.+ ++|++|+|++++++.++..++++||+ |+++.|+|..+...+...|.+++.++.+
T Consensus 99 ~~l~~~l~~~l~~~~g~~~~~-~~v~~~~g~~ea~~~a~~~~~~~gd~----Vi~~~~~y~~~~~~~~~~g~~~~~~~~~ 173 (421)
T 3l8a_A 99 DDLYQAVIDWERKEHDYAVVK-EDILFIDGVVPAISIALQAFSEKGDA----VLINSPVYYPFARTIRLNDHRLVENSLQ 173 (421)
T ss_dssp HHHHHHHHHHHHHHHCCCCCG-GGEEEESCHHHHHHHHHHHHSCTEEE----EEEEESCCHHHHHHHHHTTEEEEEEECE
T ss_pred HHHHHHHHHHHHHHhCCCCCH-HHEEEcCCHHHHHHHHHHHhcCCCCE----EEECCCCcHHHHHHHHHCCCEEEecccc
Confidence 889999998865 34555544 58999999999999999999999998 9999999999999999999999988764
Q ss_pred ---------cccccc--C-CCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCC-----CCcCC---
Q 018172 118 ---------ANTFDK--N-NGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQ-----YTPIT--- 173 (360)
Q Consensus 118 ---------~~~~~~--~-~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~-----~~~~~--- 173 (360)
.+.++. + +++++|++++|+||||.+++ +.+.++|+++|+++|+||+|.+.. ..++.
T Consensus 174 ~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 253 (421)
T 3l8a_A 174 IINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLD 253 (421)
T ss_dssp EETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSC
T ss_pred ccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcC
Confidence 122222 2 68999999999999999987 356678989999999999998532 12221
Q ss_pred -CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHh-hccccCChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 174 -GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIE-LGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 174 -~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
+..++++++.|+||.++++|+|+||++++++++++.+..... ....+.|++++.++.++++. . +.++++.++.+
T Consensus 254 ~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~--~--~~~~~~~~~~~ 329 (421)
T 3l8a_A 254 ASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQY--G--KPWLEELKTVI 329 (421)
T ss_dssp TTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHH--C--HHHHHHHHHHH
T ss_pred chhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhc--c--HHHHHHHHHHH
Confidence 224678999999999999999999999944999999987763 34457899999999888873 2 37899999999
Q ss_pred HHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHH-HhhCeeeeCCCCCCC-CCCe
Q 018172 252 SERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLL-RAERIMARGGRRFGA-DAKY 325 (360)
Q Consensus 252 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l-~~~gI~~~pg~~f~~-~~~~ 325 (360)
+++++++.+.|++++++....+.+.+ +.|++++. ...+.+.| +++||.+.||..|+. .+++
T Consensus 330 ~~~~~~l~~~L~~~~~i~~~~~~~~~-------------~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~ 396 (421)
T 3l8a_A 330 EGNIKLVIKELEAKTKIKVMEPEGTY-------------LVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEGKYF 396 (421)
T ss_dssp HHHHHHHHHHHHHHCSCEEECCSBSS-------------EEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGCGGGTTE
T ss_pred HHHHHHHHHHHHhCCCceEeCCCeeE-------------EEEEeccccCCCHHHHHHHHHHhCCEEEECchhhCCCCCCE
Confidence 99999999999988777766665554 56677654 24555555 567999999999974 5789
Q ss_pred EEEEecCChHHHHHHHHHHHHHHh
Q 018172 326 ARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 326 ~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
+||+++.+++++++++++|.++++
T Consensus 397 iRi~~~~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 397 ARLNVATPKNTVQEALSRIISVFG 420 (421)
T ss_dssp EEEECCSCHHHHHHHHHHHHHHC-
T ss_pred EEEEecCCHHHHHHHHHHHHHHHh
Confidence 999998899999999999999875
No 73
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=2.3e-34 Score=264.85 Aligned_cols=275 Identities=18% Similarity=0.254 Sum_probs=220.1
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
..|++. +. +++|++++++++.. .+ ++++|++|+|+++++..++..+ ||+ |+++ |+|..+...+
T Consensus 51 ~~y~~~-~~-----~~lr~~la~~~~~~--~~-~~~~v~~~~G~~~al~~~~~~~---gd~----Vl~~-p~y~~~~~~~ 113 (335)
T 1uu1_A 51 RIYYDS-PD-----EELIEKILSYLDTD--FL-SKNNVSVGNGADEIIYVMMLMF---DRS----VFFP-PTYSCYRIFA 113 (335)
T ss_dssp GSCCCS-SC-----HHHHHHHHHHHTCS--SC-CGGGEEEESSHHHHHHHHHHHS---SEE----EECS-SSCHHHHHHH
T ss_pred hcCCCC-ch-----HHHHHHHHHHcCCC--CC-CHHHEEEcCChHHHHHHHHHHh---CCc----EEEC-CCcHHHHHHH
Confidence 456543 45 99999999999843 22 3468999999999999999998 777 9999 9999999999
Q ss_pred HHhCCeeeeecCCcc-ccccC--CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCC---CCCcCCCCCC
Q 018172 105 DYLRSGLYKWDGDAN-TFDKN--NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWP---QYTPITGAAD 177 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~-~~~~~--~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~---~~~~~~~~~~ 177 (360)
+..|.+++.++.+.+ +++.+ +++++|++++||||||.+++ +.+.++++..| ++|+|++|.+. ......+..+
T Consensus 114 ~~~g~~~~~v~~~~~~~~d~~~l~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~ 192 (335)
T 1uu1_A 114 KAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYE 192 (335)
T ss_dssp HHHTCEEEECCCCTTSCCCCCCCCTTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCS
T ss_pred HHcCCeEEEeccCCCCCCCHHHcCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCC
Confidence 999999999887643 22222 47899999999999999999 56667777668 89999999842 1122234567
Q ss_pred ccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHH
Q 018172 178 HDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNM 257 (360)
Q Consensus 178 ~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 257 (360)
+++++.|+||.+|++|+|+||+++ ++++++.+..... .++.|.+.|.++.++++. ..++++.++++++++++
T Consensus 193 ~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~ 264 (335)
T 1uu1_A 193 NLAVIRTFSKAFSLAAQRVGYVVA-SEKFIDAYNRVRL--PFNVSYVSQMFAKVALDH-----REIFEERTKFIVEERER 264 (335)
T ss_dssp SEEEEEESTTTTTCGGGCCEEEEE-CHHHHHHHHHHSC--TTCSCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHH
T ss_pred CEEEEecchhhcCCcccCeEEEEe-CHHHHHHHHHhcC--CCCcCHHHHHHHHHHhCC-----HHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999 8999999887653 468899999999998873 26788999999999999
Q ss_pred HHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChH
Q 018172 258 LRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRRFGADAKYARVSMLSREE 335 (360)
Q Consensus 258 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e 335 (360)
+.+.|+++ ++.+. +. .++|+|+++++ ...+.+.|.++||.++| .++++|+|++ +++
T Consensus 265 l~~~L~~~-g~~~~-~~-------------~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~------~~~~iRis~~-~~~ 322 (335)
T 1uu1_A 265 MKSALREM-GYRIT-DS-------------RGNFVFVFMEKEEKERLLEHLRTKNVAVRS------FREGVRITIG-KRE 322 (335)
T ss_dssp HHHHHHHH-TCCBC-CC-------------CSSEEEEECCTHHHHHHHHHHHHHTEEEEE------ETTEEEEECC-CHH
T ss_pred HHHHHHHC-CcEEc-CC-------------CCeEEEEECCCCCHHHHHHHHHHCCEEEEE------CCCeEEEEeC-CHH
Confidence 99999987 34432 22 23478888875 36677777889999998 2569999995 567
Q ss_pred HHHHHHHHHHHH
Q 018172 336 IFNIFLERLSAI 347 (360)
Q Consensus 336 ~~~~~~~~l~~~ 347 (360)
++++++++|+++
T Consensus 323 ~i~~~~~~l~~~ 334 (335)
T 1uu1_A 323 ENDMILRELEVF 334 (335)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHhh
Confidence 899999998764
No 74
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=2e-34 Score=272.47 Aligned_cols=292 Identities=13% Similarity=0.076 Sum_probs=221.9
Q ss_pred cccccCCCCccccccHHHHHHHHHHH-hhcCCCCCCCCcE--EEcCChHHHHHHHH---HhhcCCCCCCCceEEEeCCCC
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLH-HVVDNAVSDGRHI--VIGTGSTQLYQAAL---YALSSPGGPEPISVVSAAPYY 97 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~-~~~~~~~~~~~~i--~~t~G~t~~l~~~~---~~l~~~gd~~~~~vl~~~p~~ 97 (360)
...|++..|. ++||+++++++ +..+.+++ +++| ..|.|+++++..+. ..+.++||+ |++++|+|
T Consensus 72 ~~~y~~~~g~-----~~lr~~ia~~~~~~~~~~~~-~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~----Vlv~~p~y 141 (409)
T 4eu1_A 72 NMDYAPVTGI-----ASFVEEAQKLCFGPTCAALR-DGRIASCQTLGGTGALRIGGDLLNRFVANCNR----IYGPDVGY 141 (409)
T ss_dssp CCCCCCTTCC-----HHHHHHHHHHHHCSSCHHHH-TTCEEEEEESHHHHHHHHHHHHGGGTSSSCCE----EEEESSCC
T ss_pred cccCCCCCCc-----HHHHHHHHHHHcCCCchhhc-cCceeeeecccchHHHHHHHHHHHHhcCCCCE----EEEeCCCc
Confidence 3568888887 99999999986 43211111 3467 45899999988754 445688898 99999999
Q ss_pred CCcHHHHHHhCCeeeeecCCc-c--cccc----------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEE
Q 018172 98 SQYPAETDYLRSGLYKWDGDA-N--TFDK----------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIH 160 (360)
Q Consensus 98 ~~~~~~~~~~g~~~~~~~~~~-~--~~~~----------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~ 160 (360)
..+..+++..|++++.++.+. + +++. ..+++++++++||||||.+++. .+.++|+++|+++|+
T Consensus 142 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 221 (409)
T 4eu1_A 142 PNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFV 221 (409)
T ss_dssp THHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEE
Confidence 999999999999999998631 1 2221 2356677889999999999982 466788889999999
Q ss_pred eecccCCCCCc----------CCCCCCccEEEeccccccCCCCceEEEE--eecCHH----HHHHHHHHHhhccccCChH
Q 018172 161 DLAYYWPQYTP----------ITGAADHDIMLFTLSKCTGHAGSRIGWA--LVKDTE----VARKMTRFIELGSIGVSKE 224 (360)
Q Consensus 161 D~ay~~~~~~~----------~~~~~~~~i~~~S~sK~~~~~G~r~G~~--~~~~~~----~~~~l~~~~~~~~~~~~~~ 224 (360)
||+|.+..+.. +.+..+++++++||||+||++|+|+||+ ++++++ +++.+.........+++.+
T Consensus 222 De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 301 (409)
T 4eu1_A 222 DMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLY 301 (409)
T ss_dssp EESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHH
T ss_pred eccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChH
Confidence 99998644322 1245678899999999999999999997 554777 6777777665566788899
Q ss_pred HHHHHHHHhcccC--CCchhHHHHHHHHHHHHHHHHHHHHHhcCC---cccCCCCCcccccccccCCCCCCcccccCCch
Q 018172 225 SQLRAAKILGIVS--DDYPNFFEYGRRLMSERWNMLRQVIRQSGV---FGLPEYPLEYCNFTGKFTNSHPGFAWLESKED 299 (360)
Q Consensus 225 ~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
.|.++.++++... ..+..++++.+++++++++++.+.|++++. +.+..+.+++ |+|++++.
T Consensus 302 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~-------------~~~~~~~~- 367 (409)
T 4eu1_A 302 GAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGM-------------MAYTGLTR- 367 (409)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCSS-------------EEECCCCH-
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCceE-------------EEEeCCCH-
Confidence 9999998887310 112356889999999999999999998842 3333344443 67777654
Q ss_pred HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHH
Q 018172 300 EDCEKLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQ 348 (360)
Q Consensus 300 ~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~ 348 (360)
+.+..+++++||.+.|| .|++++. +++++++++++|++++
T Consensus 368 ~~~~~ll~~~gv~v~p~---------~Ri~~~~~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 368 EQVELLRSEYHIYMTLN---------GRAAVSGLNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp HHHHHHHHHHCEECCTT---------CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEcCC---------CEEEEEecCHhhHHHHHHHHHHHh
Confidence 66777888889999985 3899976 8888999999999876
No 75
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=7.8e-34 Score=264.82 Aligned_cols=279 Identities=19% Similarity=0.183 Sum_probs=225.8
Q ss_pred HHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 39 PELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 39 ~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
.++|++++++++. +|..+.+ ++|++|+|+++++..++..++++||+ |++++|+|..+...++..|.+++.++.+
T Consensus 72 ~~l~~~la~~l~~~~g~~~~~-~~v~~~~G~~~al~~~~~~l~~~gd~----Vl~~~~~y~~~~~~~~~~g~~~~~v~~~ 146 (369)
T 3cq5_A 72 VELRDELAAYITKQTGVAVTR-DNLWAANGSNEILQQLLQAFGGPGRT----ALGFQPSYSMHPILAKGTHTEFIAVSRG 146 (369)
T ss_dssp HHHHHHHHHHHHHHHCCCCCG-GGEEEESHHHHHHHHHHHHHCSTTCE----EEEEESSCTHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHhhhhcccCCCCh-HhEEECCChHHHHHHHHHHhcCCCCE----EEEcCCChHHHHHHHHHcCCEEEEecCC
Confidence 8999999999653 3444444 58999999999999999999999998 9999999999999999999999998866
Q ss_pred cc-cccc-------CC-CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC-Cc---CCCCCC-ccEEE
Q 018172 118 AN-TFDK-------NN-GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY-TP---ITGAAD-HDIML 182 (360)
Q Consensus 118 ~~-~~~~-------~~-~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~-~~---~~~~~~-~~i~~ 182 (360)
.+ .++. ++ ++++|++++||||||.+++ +.+.++++.+++++|+|++|.+... .+ ..+..+ +++++
T Consensus 147 ~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~ 226 (369)
T 3cq5_A 147 ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVS 226 (369)
T ss_dssp TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEE
T ss_pred cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEE
Confidence 43 2221 23 7899999999999999999 5677888888899999999986442 11 123345 78999
Q ss_pred eccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 018172 183 FTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVI 262 (360)
Q Consensus 183 ~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 262 (360)
.|+||.++++|+|+||+++ ++++++.+..... .++.|.+.|.++.++++. ..++++.+++++++++++.+.|
T Consensus 227 ~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~-----~~~~~~~~~~~~~~~~~l~~~L 298 (369)
T 3cq5_A 227 RTMSKAFDFAGGRLGYFVA-NPAFIDAVMLVRL--PYHLSALSQAAAIVALRH-----SADTLGTVEKLSVERVRVAARL 298 (369)
T ss_dssp EESSSTTSCGGGCCEEEEE-CTHHHHHHHTTSC--TTCSCHHHHHHHHHHHHT-----HHHHHTHHHHHHHHHHHHHHHH
T ss_pred EechHhcCCcccceEEEEe-CHHHHHHHHHcCC--CCCCCHHHHHHHHHHhcC-----HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 7888888876543 457889999999888872 2678899999999999999999
Q ss_pred HhcCCcccCCCCCcccccccccCCCCCCcccccCC-chHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHH
Q 018172 263 RQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-EDEDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFL 341 (360)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~ 341 (360)
++. ++.+. + +.++|+|++++ +...+.+.|.++||.++|| + .++++|++++ +++++++++
T Consensus 299 ~~~-g~~~~-~-------------~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~---~-~~~~iRis~~-~~~~i~~~~ 358 (369)
T 3cq5_A 299 EEL-GYAVV-P-------------SESNFVFFGDFSDQHAAWQAFLDRGVLIRDV---G-IAGHLRTTIG-VPEENDAFL 358 (369)
T ss_dssp HHH-TCEEE-C-------------CSSSEEEEECCSSHHHHHHHHHHTTEECBCC---S-CTTEEEEECC-CHHHHHHHH
T ss_pred HhC-CCEEC-C-------------CCCeEEEEECCCCHHHHHHHHHHCCEEEEEC---C-CCCeEEEEeC-CHHHHHHHH
Confidence 886 34433 2 22347788776 3466777788999999998 2 2579999996 889999999
Q ss_pred HHHHHHHhc
Q 018172 342 ERLSAIQGG 350 (360)
Q Consensus 342 ~~l~~~~~~ 350 (360)
++|+++++.
T Consensus 359 ~~l~~~~~~ 367 (369)
T 3cq5_A 359 DAAAEIIKL 367 (369)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhc
Confidence 999998754
No 76
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=3.1e-34 Score=271.30 Aligned_cols=294 Identities=14% Similarity=0.083 Sum_probs=225.6
Q ss_pred cccccCCCCccccccHHHHHHHHHHH-hhcCCCCCCCCcEEE--cCChHHHHHHHHH--hhcCCC-----CCCCceEEEe
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLH-HVVDNAVSDGRHIVI--GTGSTQLYQAALY--ALSSPG-----GPEPISVVSA 93 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~-~~~~~~~~~~~~i~~--t~G~t~~l~~~~~--~l~~~g-----d~~~~~vl~~ 93 (360)
...|.+..|. +++|+++++++ +.++..+.+ ++|++ |+|+++++..++. .++++| |+ |+++
T Consensus 67 ~~~y~~~~g~-----~~lr~~la~~~~~~~~~~~~~-~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~----Vl~~ 136 (412)
T 1ajs_A 67 NHEYLPILGL-----AEFRTCASRLALGDDSPALQE-KRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTP----VYVS 136 (412)
T ss_dssp CCCCCCTTCC-----HHHHHHHHHHHHCTTCHHHHT-TCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSC----EEEE
T ss_pred ccCCCCCCCC-----HHHHHHHHHHHhcCCCCccCC-CcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCe----EEEc
Confidence 3458777777 99999999998 444433344 48999 9999999999954 456788 88 9999
Q ss_pred CCCCCCcHHHHHHhCCe-eeeecCC---cccccc----------CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcC
Q 018172 94 APYYSQYPAETDYLRSG-LYKWDGD---ANTFDK----------NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAE 155 (360)
Q Consensus 94 ~p~~~~~~~~~~~~g~~-~~~~~~~---~~~~~~----------~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~ 155 (360)
.|+|..+...++..|.+ ++.++.+ ..+++. .++++++++++||||||.+++. .+.++|+++|
T Consensus 137 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 216 (412)
T 1ajs_A 137 SPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRF 216 (412)
T ss_dssp ESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCC
Confidence 99999999999999999 9988762 112211 1367888899999999999883 4667888899
Q ss_pred cEEEEeecccCCCCC-------cCC---CCCCccEEEeccccccCCCCceEEEEee--cCHH----HHHHHHHHHhhccc
Q 018172 156 GKLIHDLAYYWPQYT-------PIT---GAADHDIMLFTLSKCTGHAGSRIGWALV--KDTE----VARKMTRFIELGSI 219 (360)
Q Consensus 156 ~~li~D~ay~~~~~~-------~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~--~~~~----~~~~l~~~~~~~~~ 219 (360)
+++|+||+|.+..+. ++. ...++++++.|+||.+|++|+|+||+++ .+++ +++.+.........
T Consensus 217 ~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (412)
T 1ajs_A 217 LFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWS 296 (412)
T ss_dssp CEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTS
T ss_pred CEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccC
Confidence 999999999864332 121 2457889999999999988999999998 2565 55555554444444
Q ss_pred cCChHHHHHHHHHhcccC--CCchhHHHHHHHHHHHHHHHHHHHHHhcC---CcccCCCCCcccccccccCCCCCCcccc
Q 018172 220 GVSKESQLRAAKILGIVS--DDYPNFFEYGRRLMSERWNMLRQVIRQSG---VFGLPEYPLEYCNFTGKFTNSHPGFAWL 294 (360)
Q Consensus 220 ~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (360)
+.+.++|.++.++++... ..++.++++.+++++++++++.+.|++++ ++.+..+.++ +|+|+
T Consensus 297 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~-------------~~~~~ 363 (412)
T 1ajs_A 297 NPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIG-------------MFSFT 363 (412)
T ss_dssp SCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCS-------------SEEEC
T ss_pred CCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCc-------------eEEEe
Confidence 568999999998887320 00235889999999999999999999885 2444333333 36777
Q ss_pred cCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHHhc
Q 018172 295 ESKEDEDCEKLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 295 ~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~ 350 (360)
+++ .+.+..++.++||.+.|+ +|++++. +++++++++++|++++++
T Consensus 364 ~~~-~~~~~~~l~~~gv~v~~~---------~Ris~~~~~~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 364 GLN-PKQVEYLINQKHIYLLPS---------GRINMCGLTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp CCC-HHHHHHHHHTTCEECCTT---------SEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred CCC-HHHHHHHHHhCCEEecCC---------cEEEeeeCCHHHHHHHHHHHHHHHHh
Confidence 765 467788888999999873 5999985 899999999999998864
No 77
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=1.8e-34 Score=271.41 Aligned_cols=291 Identities=15% Similarity=0.134 Sum_probs=221.9
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCC-CCCCCcEEE--cCChHHHHHHHHHhh--cCCCCCCCceEEEeCCCCCC
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNA-VSDGRHIVI--GTGSTQLYQAALYAL--SSPGGPEPISVVSAAPYYSQ 99 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~-~~~~~~i~~--t~G~t~~l~~~~~~l--~~~gd~~~~~vl~~~p~~~~ 99 (360)
..|++..|. ++||+++++++...+.. ++ +++|++ |+|++++++.++..+ +++||+ |+++.|+|..
T Consensus 63 ~~y~~~~g~-----~~lr~~la~~~~~~~~~~~~-~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~----Vl~~~p~y~~ 132 (396)
T 2q7w_A 63 KNYLGIDGI-----PEFGRCTQELLFGKGSALIN-DKRARTAQTPGGTGALRVAADFLAKNTSVKR----VWVSNPSWPN 132 (396)
T ss_dssp CCCCCTTCC-----HHHHHHHHHHHHCTTCHHHH-TTCEEEEEESHHHHHHHHHHHHHHHHSCCCE----EEEEESCCTH
T ss_pred cCCCCCCCC-----HHHHHHHHHHHhcCCCCccc-cccEEEEecccchhhHHHHHHHHHHhCCCCE----EEEcCCCchh
Confidence 458777777 99999999998533221 22 358998 999999999998766 468988 9999999999
Q ss_pred cHHHHHHhCCeeeeecCC---cccccc-------C---CCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEee
Q 018172 100 YPAETDYLRSGLYKWDGD---ANTFDK-------N---NGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDL 162 (360)
Q Consensus 100 ~~~~~~~~g~~~~~~~~~---~~~~~~-------~---~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ 162 (360)
+...++..|.+++.++.+ ..+++. + ++++++++++||||||.+++. .+.++|+++|+++|+||
T Consensus 133 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De 212 (396)
T 2q7w_A 133 HKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDF 212 (396)
T ss_dssp HHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 999999999999988873 222211 1 247888999999999999883 46678888999999999
Q ss_pred cccCCCCC------cCC---CCCCccEEEeccccccCCCCceEEEEee--cCH----HHHHHHHHHHhhccccCChHHHH
Q 018172 163 AYYWPQYT------PIT---GAADHDIMLFTLSKCTGHAGSRIGWALV--KDT----EVARKMTRFIELGSIGVSKESQL 227 (360)
Q Consensus 163 ay~~~~~~------~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~--~~~----~~~~~l~~~~~~~~~~~~~~~~~ 227 (360)
+|.+..+. ++. ...++++++.|+||.+|++|+|+||+++ +++ ++++.+.........+.+.+.|.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (396)
T 2q7w_A 213 AYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGAS 292 (396)
T ss_dssp SCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHH
T ss_pred ccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHH
Confidence 99864332 121 2346889999999999999999999986 345 45566655444444456899999
Q ss_pred HHHHHhccc--CCCchhHHHHHHHHHHHHHHHHHHHHHhcC---CcccCCCCCcccccccccCCCCCCcccccCCchHHH
Q 018172 228 RAAKILGIV--SDDYPNFFEYGRRLMSERWNMLRQVIRQSG---VFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDC 302 (360)
Q Consensus 228 ~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (360)
++.++++.. .+.++.++++.++.++++++++.+.|++++ ++.+..+.+++ |+|++++. +.+
T Consensus 293 a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-------------~~~~~~~~-~~~ 358 (396)
T 2q7w_A 293 VVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGM-------------FSFSGLTK-EQV 358 (396)
T ss_dssp HHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSS-------------EEECCCCH-HHH
T ss_pred HHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCce-------------EEEecCCH-HHH
Confidence 998888731 011236888999999999999999999885 24443344333 67877754 678
Q ss_pred HHHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHH
Q 018172 303 EKLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQ 348 (360)
Q Consensus 303 ~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~ 348 (360)
.++|+++||.+.|| +|+|++. ++|++++++++|++++
T Consensus 359 ~~~l~~~gv~v~~~---------~Ris~~~~~~e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 359 LRLREEFGVYAVAS---------GRVNVAGMTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp HHHHHHHCEECCTT---------CEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred HHHHHhcCeeecCC---------ceEEEeecCHHHHHHHHHHHHhcC
Confidence 88888999999873 6999976 9999999999998864
No 78
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=4.2e-34 Score=270.50 Aligned_cols=292 Identities=12% Similarity=0.132 Sum_probs=222.6
Q ss_pred ccccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEE--cCChHHHHHHHH--HhhcCCCCCCCceEEEeCCCCCC
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVI--GTGSTQLYQAAL--YALSSPGGPEPISVVSAAPYYSQ 99 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~--t~G~t~~l~~~~--~~l~~~gd~~~~~vl~~~p~~~~ 99 (360)
..|++..|. +++|++++++++ ..|..+++ ++|++ |+|+++++.+++ ..++++||+ |+++.|+|..
T Consensus 67 ~~y~~~~g~-----~~lr~~ia~~~~~~~~~~~~~-~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~----Vl~~~p~~~~ 136 (412)
T 1yaa_A 67 HEYLGITGL-----PSLTSNAAKIIFGTQSDALQE-DRVISVQSLSGTGALHISAKFFSKFFPDKL----VYLSKPTWAN 136 (412)
T ss_dssp CCCCCTTCC-----HHHHHHHHHHHHCTTCHHHHT-TCEEEEEEEHHHHHHHHHHHHHHHHCTTCC----EEEEESCCTT
T ss_pred cCCCCCCCc-----HHHHHHHHHHHhcCCCCCCCc-ceEEEEeccchHhHHHHHHHHHHHhCCCCE----EEEeCCCCcc
Confidence 458777777 999999999984 34433444 48999 999999999883 445678998 9999999999
Q ss_pred cHHHHHHhCCeeeeecC-Cc--ccccc---------CC-CeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEee
Q 018172 100 YPAETDYLRSGLYKWDG-DA--NTFDK---------NN-GAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDL 162 (360)
Q Consensus 100 ~~~~~~~~g~~~~~~~~-~~--~~~~~---------~~-~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ 162 (360)
+...++..|++++.++. +. .+++. .+ .+.++++++||||||.+++. .+.++|+++|+++|+|+
T Consensus 137 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De 216 (412)
T 1yaa_A 137 HMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDT 216 (412)
T ss_dssp HHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 99999999999998887 32 12221 11 24555669999999999983 45677888999999999
Q ss_pred cccCCCCC-------cCC---CCCC---ccEEEeccccccCCCCceEEEEe--e----cCHH----HHHHHHHHHhhccc
Q 018172 163 AYYWPQYT-------PIT---GAAD---HDIMLFTLSKCTGHAGSRIGWAL--V----KDTE----VARKMTRFIELGSI 219 (360)
Q Consensus 163 ay~~~~~~-------~~~---~~~~---~~i~~~S~sK~~~~~G~r~G~~~--~----~~~~----~~~~l~~~~~~~~~ 219 (360)
+|.+..+. ++. ...+ ++++++|+||.+|++|+|+||++ + .+++ +++.+.........
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 296 (412)
T 1yaa_A 217 AYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVS 296 (412)
T ss_dssp SCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTS
T ss_pred ccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccC
Confidence 99753221 221 1234 78999999999998899999998 6 2455 77887775554555
Q ss_pred cCChHHHHHHHHHhcccC--CCchhHHHHHHHHHHHHHHHHHHHHHhcC---CcccCCCCCcccccccccCCCCCCcccc
Q 018172 220 GVSKESQLRAAKILGIVS--DDYPNFFEYGRRLMSERWNMLRQVIRQSG---VFGLPEYPLEYCNFTGKFTNSHPGFAWL 294 (360)
Q Consensus 220 ~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (360)
+.+.+.|.++.++++... +.++.++++.+++++++++++.+.|++++ ++.+..+.+++ |+|+
T Consensus 297 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-------------~~~~ 363 (412)
T 1yaa_A 297 NPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGM-------------FSFT 363 (412)
T ss_dssp SCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSS-------------EEEC
T ss_pred CCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceE-------------EEee
Confidence 678999999988887320 00235899999999999999999999885 24444444433 6777
Q ss_pred cCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHHh
Q 018172 295 ESKEDEDCEKLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQG 349 (360)
Q Consensus 295 ~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~~ 349 (360)
.++. +.+..++.++||.+.| ++|||++. +++++++++++|+++++
T Consensus 364 ~~~~-~~~~~~l~~~gi~v~~---------~~Ris~~~~~~~~i~~~~~~l~~~~~ 409 (412)
T 1yaa_A 364 GLTP-QMVKRLEETHAVYLVA---------SGRASIAGLNQGNVEYVAKAIDEVVR 409 (412)
T ss_dssp CCCH-HHHHHHHHHHCEECCT---------TSEEEGGGCCTTTHHHHHHHHHHHHH
T ss_pred CCCH-HHHHHHHHhCCEEecc---------CcEEEEccCCHhHHHHHHHHHHHHHH
Confidence 6653 5667788889999986 47999976 99999999999999875
No 79
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=6.9e-34 Score=267.99 Aligned_cols=296 Identities=11% Similarity=0.043 Sum_probs=214.2
Q ss_pred cccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh----cCCCCCCCceEEEeCCCCCCcH
Q 018172 26 YLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL----SSPGGPEPISVVSAAPYYSQYP 101 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l----~~~gd~~~~~vl~~~p~~~~~~ 101 (360)
.|.+..|+ ++||+++++++-........ ...+.|.|+|.++...+..+ .++||+ |++++|+|++|.
T Consensus 82 ~Y~p~~G~-----p~lr~aia~~~~g~~~~~~~-~~~~qt~ggtga~~~a~~~l~~~~~~pgd~----V~ip~P~w~~y~ 151 (420)
T 4h51_A 82 EYLPISGY-----QPFIDEAVKIIYGNTVELEN-LVAVQTLSGTGAVSLGAKLLTRVFDAETTP----IYLSDPTWPNHY 151 (420)
T ss_dssp CCCCTTCC-----HHHHHHHHHHHHC---CGGG-EEEEEEEHHHHHHHHHHHHHTTTSCTTTSC----EEEEESCCTHHH
T ss_pred CCCCcCCh-----HHHHHHHHHHhcCCCccccc-cceeeecCchHHHHHHHHHHHHhcCCCCCE----EEEecCCchhHH
Confidence 49999998 99999999975322221111 13445888888887766554 578998 999999999999
Q ss_pred HHHHHhCCeeee-ecC-Ccc-------cccc-----CCCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEeec
Q 018172 102 AETDYLRSGLYK-WDG-DAN-------TFDK-----NNGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDLA 163 (360)
Q Consensus 102 ~~~~~~g~~~~~-~~~-~~~-------~~~~-----~~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~a 163 (360)
.+++..|.+.+. .+. +.+ ++.. .++++++++++||||||..+++ .+.++++++++++|+|++
T Consensus 152 ~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~ 231 (420)
T 4h51_A 152 GVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSA 231 (420)
T ss_dssp HHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEES
T ss_pred HHHHHcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehh
Confidence 999999997543 221 111 1111 3678889999999999999993 456778889999999999
Q ss_pred ccCCCCCc----------CCCCCCccEEEeccccccCCCCceEEEEeecCH------HHHHHHHHHHhhccccCChHHHH
Q 018172 164 YYWPQYTP----------ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDT------EVARKMTRFIELGSIGVSKESQL 227 (360)
Q Consensus 164 y~~~~~~~----------~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~ 227 (360)
|.+..+.. ..+...+++++.||||.|+++|+|+||+++..+ .+...+.........+++...|.
T Consensus 232 Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~ 311 (420)
T 4h51_A 232 YQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGAR 311 (420)
T ss_dssp CTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHH
T ss_pred hhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHH
Confidence 98643321 113567899999999999999999999987321 23334444555567788889999
Q ss_pred HHHHHhccc--CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHH
Q 018172 228 RAAKILGIV--SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKL 305 (360)
Q Consensus 228 ~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (360)
++...+... ...+..+++.++++++++|+.+.+.|++++.. +.+ +.+....|+|.|+.++. +. .++
T Consensus 312 ~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~------~~~----~~i~~q~GmF~~~gls~-e~-v~~ 379 (420)
T 4h51_A 312 LAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTP------GSW----EHVINQIGMFSFLGLSK-AQ-CEY 379 (420)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS------SCC----THHHHCCSSEEECCCCH-HH-HHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC------CCC----CeecCCCceEEecCcCH-HH-HHH
Confidence 988887721 12245778899999999999999999987421 110 00112344578877754 33 367
Q ss_pred HHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHHhchh
Q 018172 306 LRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 306 l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~~ 352 (360)
|+++||++.|+. |||++. ++++++.+.++|.+++++-.
T Consensus 380 L~e~~Vy~~~~g---------Ris~Agl~~~ni~~~a~aI~~vvr~i~ 418 (420)
T 4h51_A 380 CQNHNIFITVSG---------RANMAGLTHETALMLAQTINDAVRNVN 418 (420)
T ss_dssp HHHTTEECCTTC---------EEEGGGCCHHHHHHHHHHHHHHHC---
T ss_pred HHhCCEEEcCCC---------EEEeccCCHHHHHHHHHHHHHHHHHhh
Confidence 889999998742 999987 99999999999999998754
No 80
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=2.1e-33 Score=263.95 Aligned_cols=289 Identities=16% Similarity=0.130 Sum_probs=220.1
Q ss_pred cccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEE--cCChHHHHHHHHHhhc--CCCCCCCceEEEeCCCCCC
Q 018172 24 MSYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVI--GTGSTQLYQAALYALS--SPGGPEPISVVSAAPYYSQ 99 (360)
Q Consensus 24 ~~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~--t~G~t~~l~~~~~~l~--~~gd~~~~~vl~~~p~~~~ 99 (360)
...|++..|. +++|+++++++...+. ++++|++ |+|++++++.++..+. .+||+ |+++.|+|..
T Consensus 62 ~~~y~~~~g~-----~~lr~~la~~~~~~~~---~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~----vl~~~p~~~~ 129 (394)
T 2ay1_A 62 TKTYAGLSGE-----PEFQKAMGELILGDGL---KSETTATLATVGGTGALRQALELARMANPDLR----VFVSDPTWPN 129 (394)
T ss_dssp CCCCCCSSCC-----HHHHHHHHHHHHGGGC---CGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCC----EEEEESCCHH
T ss_pred cCCCCCCCCc-----HHHHHHHHHHHhCCCC---CcccEEEEecCCchhHHHHHHHHHHhcCCCCE----EEEcCCCChh
Confidence 3468777777 9999999999742222 3468999 9999999999998775 48998 9999999999
Q ss_pred cHHHHHHhCCeeeeecCC---cccccc--------C--CCeeEEEEcCCCCCCcccchH----HHHHHhhhcCcEEEEee
Q 018172 100 YPAETDYLRSGLYKWDGD---ANTFDK--------N--NGAYIEVVNSPNNPDGTIREA----VLAKVNRSAEGKLIHDL 162 (360)
Q Consensus 100 ~~~~~~~~g~~~~~~~~~---~~~~~~--------~--~~~~~i~~~~p~NPtG~~~~~----~~~~~~~~~~~~li~D~ 162 (360)
+...++..|.+++.++.+ ..+++. + ++++++++++||||||.+++. .+.++|+++|+++|+||
T Consensus 130 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De 209 (394)
T 2ay1_A 130 HVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDL 209 (394)
T ss_dssp HHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 999999999999988873 222211 1 246778889999999999983 45678888999999999
Q ss_pred cccCCCCC------cC---CCCCCccEEEeccccccCCCCceEEEEee--cCHHHHHH----HHHHHhhccccCChHHHH
Q 018172 163 AYYWPQYT------PI---TGAADHDIMLFTLSKCTGHAGSRIGWALV--KDTEVARK----MTRFIELGSIGVSKESQL 227 (360)
Q Consensus 163 ay~~~~~~------~~---~~~~~~~i~~~S~sK~~~~~G~r~G~~~~--~~~~~~~~----l~~~~~~~~~~~~~~~~~ 227 (360)
+|.+..+. ++ ....+++++++|+||.+|++|+|+||+++ +++++++. +.........+.+.++|.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 289 (394)
T 2ay1_A 210 AYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAK 289 (394)
T ss_dssp CCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHH
T ss_pred CccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHH
Confidence 99864332 11 12345789999999999999999999987 35655444 333333344456889999
Q ss_pred HHHHHhccc--CCCchhHHHHHHHHHHHHHHHHHHHHHhcC---CcccCCCCCcccccccccCCCCCCcccccCCchHHH
Q 018172 228 RAAKILGIV--SDDYPNFFEYGRRLMSERWNMLRQVIRQSG---VFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDC 302 (360)
Q Consensus 228 ~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (360)
++.++++.. .+.+..++++.+++++++++++.+.|++++ ++.+..+.+ ++|+|++++. +.+
T Consensus 290 a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-------------g~~~~~~~~~-~~~ 355 (394)
T 2ay1_A 290 IVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHR-------------GMFSRLGATP-EQV 355 (394)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCC-------------SSEEECCCCH-HHH
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCc-------------eEEEeeCCCH-HHH
Confidence 988888732 011236889999999999999999998874 244333333 3478888764 667
Q ss_pred HHHHHhhCeeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHH
Q 018172 303 EKLLRAERIMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAI 347 (360)
Q Consensus 303 ~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~ 347 (360)
.++|+++||.+.|| +|++++. +++++++++++|+++
T Consensus 356 ~~~l~~~gi~v~~~---------~Ris~~~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 356 KRIKEEFGIYMVGD---------SRINIAGLNDNTIPILARAIIEV 392 (394)
T ss_dssp HHHHHHHCEECCTT---------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred HHHHHhCCEEecCC---------CeEEeecCCHhhHHHHHHHHHHc
Confidence 88888999999874 5999976 899999999999876
No 81
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=1.8e-36 Score=284.94 Aligned_cols=289 Identities=15% Similarity=0.232 Sum_probs=229.8
Q ss_pred HHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 39 PELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 39 ~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
.++|+++++++.. .|.++++ ++|++|+|+++++..++..+.++||+ |+++.|+|..+...++..|.+++.++.+
T Consensus 69 ~~l~~~la~~l~~~~g~~~~~-~~v~~~~g~~~a~~~~~~~~~~~gd~----vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 143 (392)
T 3b1d_A 69 DELLQAVLDWEKSEHQYSFDK-EDIVFVEGVVPAISIAIQAFTKEGEA----VLINSPVYPPFARSVRLNNRKLVSNSLK 143 (392)
Confidence 8999999998753 4544444 48999999999999999999999998 9999999999999999999998887763
Q ss_pred -c--------ccccc--C-CCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCC-----CcCCC--
Q 018172 118 -A--------NTFDK--N-NGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQY-----TPITG-- 174 (360)
Q Consensus 118 -~--------~~~~~--~-~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~-----~~~~~-- 174 (360)
. +.+.. + +++++|++++||||||.+++ +.+.++|+++|+++|+||+|.+..+ .++..
T Consensus 144 ~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 223 (392)
T 3b1d_A 144 EENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVS 223 (392)
Confidence 2 22222 2 57889999999999999988 3456788889999999999985322 22221
Q ss_pred C--CCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhcc-ccCChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 175 A--ADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGS-IGVSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 175 ~--~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
. .++++++.|+||.++++|+|+||++++++++++.+.......+ .+.+.+.|.++.++++. . ..++++.++.+
T Consensus 224 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~--~~~~~~~~~~~ 299 (392)
T 3b1d_A 224 PDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRY--G--KPWLVALKAVL 299 (392)
Confidence 1 5788999999999999999999999844568898887765543 35688899888887762 2 27889999999
Q ss_pred HHHHHHHHHHHHh-cCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHH-HhhCeeeeCCCCCCC-CCC
Q 018172 252 SERWNMLRQVIRQ-SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLL-RAERIMARGGRRFGA-DAK 324 (360)
Q Consensus 252 ~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l-~~~gI~~~pg~~f~~-~~~ 324 (360)
+++++.+.+.|++ ++++.+..+.+++ ++|++++. ...+.+.| +++||.++||..|+. .++
T Consensus 300 ~~~~~~l~~~l~~~~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~ 366 (392)
T 3b1d_A 300 EENIQFAVEYFAQEAPRLKVMKPQGTY-------------LIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGSEGEL 366 (392)
Confidence 9999999999988 6666665555554 56777753 24455666 588999999998874 467
Q ss_pred eEEEEecCChHHHHHHHHHHHHHHh
Q 018172 325 YARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 325 ~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
++||+++.++|++++++++|.++++
T Consensus 367 ~iRi~~~~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 367 HARLNIAAPKSLVEEICKRIVCCLP 391 (392)
Confidence 9999998888999999999998875
No 82
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=3.9e-32 Score=255.17 Aligned_cols=284 Identities=14% Similarity=0.084 Sum_probs=218.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCC-cEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCC--cHHHHHHhCCeeeeec
Q 018172 39 PELAEAINNLHHVVDNAVSDGR-HIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQ--YPAETDYLRSGLYKWD 115 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~-~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~--~~~~~~~~g~~~~~~~ 115 (360)
.++++.++++++. +++ +|++|+|+++++..++..++++||+ |++++|+|.. +...++..|++++.++
T Consensus 70 ~~~~~~la~~~g~------~~~~~v~~t~g~t~al~~~~~~~~~~gd~----Vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 139 (393)
T 1vjo_A 70 DEIQSLLRYVWQT------ENPLTIAVSGTGTAAMEATIANAVEPGDV----VLIGVAGYFGNRLVDMAGRYGADVRTIS 139 (393)
T ss_dssp HHHHHHHHHHHTC------CCSCEEEESSCHHHHHHHHHHHHCCTTCE----EEEEESSHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhCC------CCCcEEEEeCchHHHHHHHHHhccCCCCE----EEEEcCChhHHHHHHHHHHcCCceEEEe
Confidence 4445555555554 445 8999999999999999999999998 9999999999 8889999999999998
Q ss_pred CCccc-ccc-------CC-CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecc
Q 018172 116 GDANT-FDK-------NN-GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTL 185 (360)
Q Consensus 116 ~~~~~-~~~-------~~-~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~ 185 (360)
.+.++ ++. ++ ++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+..+......+.++++.|+
T Consensus 140 ~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~ 219 (393)
T 1vjo_A 140 KPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCS 219 (393)
T ss_dssp CCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCS
T ss_pred cCCCCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcC
Confidence 76542 221 24 7899999999999999988 67788888899999999999954433223455779999999
Q ss_pred ccccCCCCceEEEEeecCHHHHHHHHHH----H---------------hhccc-cCChHHHHHHHHHhcccCCCchhHHH
Q 018172 186 SKCTGHAGSRIGWALVKDTEVARKMTRF----I---------------ELGSI-GVSKESQLRAAKILGIVSDDYPNFFE 245 (360)
Q Consensus 186 sK~~~~~G~r~G~~~~~~~~~~~~l~~~----~---------------~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~ 245 (360)
||.++.++ |+||+++ ++++++.+... . ..... +.+.+.|.++.++++... +.+++
T Consensus 220 sK~l~~~~-~~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~---~~~~~ 294 (393)
T 1vjo_A 220 QKGLGCSP-GASPFTM-SSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIA---QEGLA 294 (393)
T ss_dssp SSTTCSCS-SCEEEEE-CHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHH---HHCHH
T ss_pred cccccCCC-ceEEEEE-CHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHH---HccHH
Confidence 99998777 9999999 78888877432 0 01223 678889998888887432 14578
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhh-CeeeeCCCCCCC
Q 018172 246 YGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAE-RIMARGGRRFGA 321 (360)
Q Consensus 246 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~-gI~~~pg~~f~~ 321 (360)
+.+++++++++++.+.|+++ ++.+..+.+ + ..++++++.++. ...+.+.|.++ ||.++||..|..
T Consensus 295 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~ 363 (393)
T 1vjo_A 295 NCWQRHQKNVEYLWERLEDI-GLSLHVEKE-Y---------RLPTLTTVCIPDGVDGKAVARRLLNEHNIEVGGGLGELA 363 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCCBSSCGG-G---------BCSSEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCcccCCcc-c---------cCCcEEEEEcCCCCCHHHHHHHHHhhCCEEEecCccccC
Confidence 89999999999999999988 566555443 1 112356666652 35666777776 999999987753
Q ss_pred CCCeEEEEe-c--CChHHHHHHHHHHHHHHh
Q 018172 322 DAKYARVSM-L--SREEIFNIFLERLSAIQG 349 (360)
Q Consensus 322 ~~~~~R~s~-~--~~~e~~~~~~~~l~~~~~ 349 (360)
++++|+++ + .++|++++++++|+++++
T Consensus 364 -~~~iRis~~~~~~~~~~i~~~~~~l~~~l~ 393 (393)
T 1vjo_A 364 -GKVWRVGLMGFNSRKESVDQLIPALEQVLR 393 (393)
T ss_dssp -TTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred -CCEEEEeCCccCChHHHHHHHHHHHHHHhC
Confidence 67999994 2 367789999999998863
No 83
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=7.8e-32 Score=253.66 Aligned_cols=287 Identities=11% Similarity=0.083 Sum_probs=220.6
Q ss_pred ccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHH
Q 018172 27 LSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETD 105 (360)
Q Consensus 27 y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~ 105 (360)
|....|. .++++++++++.. .| . +++++|+|+++++..++..++++||. |+++.|+|..+...++
T Consensus 80 ~~~~~g~-----~~~~~~l~~~la~~~g----~-~~v~~~~ggt~a~~~~~~~~~~~gd~----V~~~~p~~~~~~~~~~ 145 (398)
T 3a2b_A 80 SRFLNGT-----LDIHVELEEKLSAYVG----K-EAAILFSTGFQSNLGPLSCLMGRNDY----ILLDERDHASIIDGSR 145 (398)
T ss_dssp BTTTTCC-----CHHHHHHHHHHHHHHT----C-SEEEEESSHHHHHHHHHHHSSCTTCE----EEEETTCCHHHHHHHH
T ss_pred cCcccCC-----cHHHHHHHHHHHHHhC----C-CcEEEECCHHHHHHHHHHHHhCCCCE----EEECCccCHHHHHHHH
Confidence 4555555 5555555554322 12 2 48999999999999999999999998 9999999999999999
Q ss_pred HhCCeeeeecC-Ccccccc--CC----CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC----CcCC
Q 018172 106 YLRSGLYKWDG-DANTFDK--NN----GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY----TPIT 173 (360)
Q Consensus 106 ~~g~~~~~~~~-~~~~~~~--~~----~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~----~~~~ 173 (360)
..|.+++.++. |.+.++. +. ++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+.+ .+..
T Consensus 146 ~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 225 (398)
T 3a2b_A 146 LSFSKVIKYGHNNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTA 225 (398)
T ss_dssp HSSSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHH
T ss_pred HcCCceEEeCCCCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchH
Confidence 99999999885 3333332 11 7899999999999999988 6788889989999999999985432 1111
Q ss_pred ---CCCCc-cEEEeccccccCCCCceEEEEeecCHHHHHHHHHH-HhhccccCChHHHHH-HHHHhcccCCCchhHHHHH
Q 018172 174 ---GAADH-DIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRF-IELGSIGVSKESQLR-AAKILGIVSDDYPNFFEYG 247 (360)
Q Consensus 174 ---~~~~~-~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~ 247 (360)
+..++ +++++|+||.++++| ||+++ ++++++.+... ......+.+.+.|.+ +.++++.. .++++.
T Consensus 226 ~~~~~~~~~di~~~s~sK~~~~~G---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~-----~~~~~~ 296 (398)
T 3a2b_A 226 SHFGLNDDVDLIMGTFSKSLASLG---GFVAG-DADVIDFLKHNARSVMFSASMTPASVASTLKALEII-----QNEPEH 296 (398)
T ss_dssp HHHTCGGGCSEEEEESSSTTCSSC---EEEEE-CHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH-----HHCTHH
T ss_pred hhcCCCcCCeEEEecccccccCCC---cEEEe-CHHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHH-----hhCHHH
Confidence 22234 799999999999778 99998 89999998775 333445566677764 45667632 456788
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCC--C
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGA--D 322 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~--~ 322 (360)
++.++++++++.+.|+++ ++.+..+ .++|+|+.+++. ..+.+.|.++||.+.||..|+. .
T Consensus 297 ~~~~~~~~~~l~~~L~~~-g~~~~~~--------------~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~ 361 (398)
T 3a2b_A 297 IEKLWKNTDYAKAQLLDH-GFDLGAT--------------ESPILPIFIRSNEKTFWVTKMLQDDGVFVNPVVSPAVPAE 361 (398)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCCBCSC--------------CSSEEEEECCCHHHHHHHHHHHHHTTEECEEECTTTSCGG
T ss_pred HHHHHHHHHHHHHHHHhc-CCCcCCC--------------CCCEEEEEcCCHHHHHHHHHHHHHCCcEEEeeCCCCCCCC
Confidence 999999999999999988 4444332 234788888753 5677777788999999988853 3
Q ss_pred CCeEEEEecC--ChHHHHHHHHHHHHHHhch
Q 018172 323 AKYARVSMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 323 ~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
.+++|++++. ++|++++++++|++++++.
T Consensus 362 ~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 362 ESLIRFSLMATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp GCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 5799999986 9999999999999998754
No 84
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.3e-31 Score=249.04 Aligned_cols=287 Identities=13% Similarity=0.103 Sum_probs=221.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCC--cHHHHHHhCCeeeeecC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQ--YPAETDYLRSGLYKWDG 116 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~--~~~~~~~~g~~~~~~~~ 116 (360)
.++++.++++++. + +++++++|+|+++++..++..++++||+ |++++|+|.. +...++..|++++.++.
T Consensus 56 ~~~~~~la~~~g~---~--~~~~v~~~~g~t~a~~~~~~~l~~~gd~----vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 126 (386)
T 2dr1_A 56 MDTVERLREFLEV---E--KGEVLLVPSSGTGIMEASIRNGVSKGGK----VLVTIIGAFGKRYKEVVESNGRKAVVLEY 126 (386)
T ss_dssp HHHHHHHHHHHTC---S--SSEEEEESSCHHHHHHHHHHHHSCTTCE----EEEEESSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHhCC---C--CCcEEEEeCChHHHHHHHHHHhhcCCCe----EEEEcCCchhHHHHHHHHHhCCceEEEec
Confidence 4445555555553 2 1457999999999999999999999998 9999999998 88888999999999887
Q ss_pred Cccc------ccc----CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecc
Q 018172 117 DANT------FDK----NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTL 185 (360)
Q Consensus 117 ~~~~------~~~----~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~ 185 (360)
+.+. +.. ++++++|++++|+||||.+.+ +.+.++|+++|+++|+|++|..+.........+.+++++|+
T Consensus 127 ~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~ 206 (386)
T 2dr1_A 127 EPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSS 206 (386)
T ss_dssp CTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEET
T ss_pred CCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEec
Confidence 5432 211 357899999999999999988 67888899899999999999865443223445679999999
Q ss_pred ccccCCCCceEEEEeecCHHHHHHHH----------------HH--HhhccccCChHHHHHHHHHhcccCCCchh-HHHH
Q 018172 186 SKCTGHAGSRIGWALVKDTEVARKMT----------------RF--IELGSIGVSKESQLRAAKILGIVSDDYPN-FFEY 246 (360)
Q Consensus 186 sK~~~~~G~r~G~~~~~~~~~~~~l~----------------~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~ 246 (360)
||.++.++ ++||+++ ++++++.+. .. ......+.+.+.|.++.++++.+.. . .+++
T Consensus 207 sK~~~~~~-g~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~g~~~~ 281 (386)
T 2dr1_A 207 QKAFGVPP-GLAIGAF-SERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEK---MGGKEK 281 (386)
T ss_dssp TSTTCCCS-SCEEEEE-CHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHH---TTCHHH
T ss_pred cccccCCC-ceEEEEE-CHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH---hcCHHH
Confidence 99998552 4899999 788887762 22 1234567888899888888874321 2 4788
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhhCeeeeCCCCCCCCC
Q 018172 247 GRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERIMARGGRRFGADA 323 (360)
Q Consensus 247 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~pg~~f~~~~ 323 (360)
.+++++++++++.+.|+++ ++.+..+.+. ..++++|+.++. ...+.+.|.++||.++||..+. ..
T Consensus 282 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~-~~ 349 (386)
T 2dr1_A 282 WLEMYEKRAKMVREGVREI-GLDILAEPGH----------ESPTITAVLTPPGIKGDEVYEAMRKRGFELAKGYGSV-KE 349 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBSSCTTC----------BCSSEEEEECCTTCCHHHHHHHHHHTTEECEECCGGG-TT
T ss_pred HHHHHHHHHHHHHHHHHHc-CCeeCcCccc----------cCCceEEEEcCCCCCHHHHHHHHHHCCeEEecCcccc-CC
Confidence 9999999999999999988 5555444321 134467887763 3667777778899999998664 36
Q ss_pred CeEEEEecC--ChHHHHHHHHHHHHHHhch
Q 018172 324 KYARVSMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 324 ~~~R~s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
+++|+++.. +++++++++++|++++++.
T Consensus 350 ~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 379 (386)
T 2dr1_A 350 KTFRIGHMGYMKFEDIQEMLDNLREVINEL 379 (386)
T ss_dssp TEEEEECCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 799999984 9999999999999998764
No 85
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=1.7e-32 Score=256.33 Aligned_cols=286 Identities=13% Similarity=0.072 Sum_probs=213.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc----CCCCCCCceEEEeCCCCCCcHHHH---HHhCCee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS----SPGGPEPISVVSAAPYYSQYPAET---DYLRSGL 111 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~----~~gd~~~~~vl~~~p~~~~~~~~~---~~~g~~~ 111 (360)
+++|++++++++. ++++|++|+|+++++..++..+. ++||+ |++++|+|+.+...+ +..|+++
T Consensus 47 ~~l~~~la~~~g~------~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~----vl~~~~~~~~~~~~~~~~~~~g~~~ 116 (384)
T 1eg5_A 47 EKAREKVAKVLGV------SPSEIFFTSCATESINWILKTVAETFEKRKRT----IITTPIEHKAVLETMKYLSMKGFKV 116 (384)
T ss_dssp HHHHHHHHHHHTS------CGGGEEEESCHHHHHHHHHHHHHHHTTTTCCE----EEECTTSCHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHcCC------CCCeEEEECCHHHHHHHHHHhhhhhccCCCCE----EEECCCCchHHHHHHHHHHhcCCEE
Confidence 8999999999985 45689999999999999999997 78998 999999999887666 6779999
Q ss_pred eeecCCccc-cc-----c--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcC--cEEEEeecccCCCCCcCCCCCCccE
Q 018172 112 YKWDGDANT-FD-----K--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAE--GKLIHDLAYYWPQYTPITGAADHDI 180 (360)
Q Consensus 112 ~~~~~~~~~-~~-----~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~--~~li~D~ay~~~~~~~~~~~~~~~i 180 (360)
+.++.+.++ ++ . ++++++|++++|+||||.+++ +.+.++|+++| +++|+|++|..+..+......+.++
T Consensus 117 ~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di 196 (384)
T 1eg5_A 117 KYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDY 196 (384)
T ss_dssp EECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSE
T ss_pred EEEccCCCCccCHHHHHHHhCCCCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCE
Confidence 998876432 21 1 357999999999999999998 67788888899 9999999998543321123346789
Q ss_pred EEeccccccCCCCceEEEEeecCHHH--HHHHHHH---HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHH
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTEV--ARKMTRF---IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERW 255 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~~--~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 255 (360)
+++|+||.+|++| +||+++ ++++ .+.+... ......+.+.+.|.++.++++.. .+++++.++++++++
T Consensus 197 ~~~s~sK~~g~~G--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~----~~~~~~~~~~~~~~~ 269 (384)
T 1eg5_A 197 ASFSAHKFHGPKG--VGITYI-RKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIA----VEELSEAAKHMEKLR 269 (384)
T ss_dssp EEEEGGGGTSCTT--CEEEEE-CTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHH----HHTHHHHHHHHHHHH
T ss_pred EEecHHHhcCCCc--eEEEEE-cCCCccccccccCcccccccCCCCChHHHHHHHHHHHHH----HHhHHHHHHHHHHHH
Confidence 9999999999888 799999 5554 2222110 11234578889998888888742 257889999999999
Q ss_pred HHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC--chHHHHHHHHhhCeeeeCCCCCCCC-----------
Q 018172 256 NMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--EDEDCEKLLRAERIMARGGRRFGAD----------- 322 (360)
Q Consensus 256 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gI~~~pg~~f~~~----------- 322 (360)
+++.+.|++. ++.+..+..+. .+.++++.++ +...+.+.|.++||.+++|..|+..
T Consensus 270 ~~l~~~L~~~-g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~ 338 (384)
T 1eg5_A 270 SKLVSGLMNL-GAHIITPLEIS----------LPNTLSVSFPNIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAM 338 (384)
T ss_dssp HHHHHHHHTT-TCEECSCTTSB----------CTTEEEEECTTCCHHHHHHHHHHTTEECBC------------CHHHHT
T ss_pred HHHHHHhCCC-CeEEeCCcccC----------CCCEEEEEeCCCCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHc
Confidence 9999999884 55554332110 1123444444 2366777888999999999877431
Q ss_pred -------CCeEEEEec--CChHHHHHHHHHHHHHHhchh
Q 018172 323 -------AKYARVSML--SREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 323 -------~~~~R~s~~--~~~e~~~~~~~~l~~~~~~~~ 352 (360)
.+++||+++ .++|++++++++|++++++.+
T Consensus 339 g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 377 (384)
T 1eg5_A 339 GVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFLD 377 (384)
T ss_dssp TCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred CCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 368999997 389999999999999997654
No 86
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=2.9e-31 Score=245.18 Aligned_cols=281 Identities=14% Similarity=0.041 Sum_probs=215.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH--HHHHHhCCeeeeecC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP--AETDYLRSGLYKWDG 116 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~--~~~~~~g~~~~~~~~ 116 (360)
.++|++++++++. +++++++|+|+++++..++..++++||+ |+++.|+|+++. ..++..|++++.++.
T Consensus 37 ~~l~~~la~~~g~------~~~~i~~~~g~t~a~~~~~~~~~~~gd~----vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 106 (352)
T 1iug_A 37 LKARGLLREAFRT------EGEVLILTGSGTLAMEALVKNLFAPGER----VLVPVYGKFSERFYEIALEAGLVVERLDY 106 (352)
T ss_dssp HHHHHHHHHHHTC------SSEEEEEESCHHHHHHHHHHHHCCTTCE----EEEEECSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHhCC------CCceEEEcCchHHHHHHHHHhccCCCCe----EEEEeCCchhHHHHHHHHHcCCceEEEeC
Confidence 8999999999985 4468999999999999999999999998 999999999875 445667999998886
Q ss_pred Ccc------ccccCCCeeEEEEcCCCCCCcccch-HHHHHHhhhc--CcEEEEeecccCCCCCcCCCCCCccEEEecccc
Q 018172 117 DAN------TFDKNNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSA--EGKLIHDLAYYWPQYTPITGAADHDIMLFTLSK 187 (360)
Q Consensus 117 ~~~------~~~~~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~--~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK 187 (360)
+.+ .+.. +++++|++++|+||||.+++ +.+.++|+++ |+++|+|++|..+..+......+.+++++|+||
T Consensus 107 ~~~~~~d~~~l~~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K 185 (352)
T 1iug_A 107 PYGDTPRPEDVAK-EGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQK 185 (352)
T ss_dssp CTTCCCCTTTSCC-SSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSS
T ss_pred CCCCCCCHHHHhc-cCCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcc
Confidence 533 3333 57899999999999999998 6788889889 999999999985433211223357899999999
Q ss_pred -ccCCCCceEEEEeecCHHHHHH---------HHH----H-HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHH
Q 018172 188 -CTGHAGSRIGWALVKDTEVARK---------MTR----F-IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMS 252 (360)
Q Consensus 188 -~~~~~G~r~G~~~~~~~~~~~~---------l~~----~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 252 (360)
.++++| +||+++ ++++++. +.. . ......+.+...+.++.++++... .++++.+++++
T Consensus 186 ~~~~~~g--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~----~~~~~~~~~~~ 258 (352)
T 1iug_A 186 GLMCPPG--LGFVAL-SPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVL----PRLEEHLALKA 258 (352)
T ss_dssp TTCCCSC--EEEEEE-CHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHG----GGHHHHHHHHH
T ss_pred cccCCCc--eeEEEE-CHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 555445 899998 7776654 221 1 122344667777777777776432 34889999999
Q ss_pred HHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEE
Q 018172 253 ERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERIMARGGRRFGADAKYARVS 329 (360)
Q Consensus 253 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s 329 (360)
++++++.+.|+++ ++.+..+. ..++++|+.+++ ...+.+.|.++||.++||.... .++++|++
T Consensus 259 ~~~~~l~~~L~~~-g~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~-~~~~iRi~ 324 (352)
T 1iug_A 259 WQNALLYGVGEEG-GLRPVPKR------------FSPAVAAFYLPEGVPYARVKEAFAQRGAVIAGGQGPL-KGKVFRLS 324 (352)
T ss_dssp HHHHHHHHHHHHT-TCEESCSS------------BCTTCEEEECCTTCCHHHHHHHHHTTTEECEECCGGG-TTTEEEEC
T ss_pred HHHHHHHHHHHHC-CCcccccc------------cCCeEEEEEcCCCCCHHHHHHHHHHCCEEEEeCCCcc-CCCEEEEE
Confidence 9999999999987 55544332 123467887763 3667778888899999987432 36799999
Q ss_pred ecC--ChHHHHHHHHHHHHHHhch
Q 018172 330 MLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 330 ~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
+.. +++++++++++|++++++.
T Consensus 325 ~~~~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 325 LMGAYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHHHh
Confidence 975 7999999999999998653
No 87
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.98 E-value=9.6e-31 Score=246.84 Aligned_cols=285 Identities=15% Similarity=0.104 Sum_probs=213.1
Q ss_pred HHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH----HHHHhCCeeeeec
Q 018172 40 ELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA----ETDYLRSGLYKWD 115 (360)
Q Consensus 40 ~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~----~~~~~g~~~~~~~ 115 (360)
+||++++++++. + ++++++|+++++..++.+++++||+ |+++.|+|..+.. .++..|++++.++
T Consensus 66 ~l~~~ia~~~g~-------~-~~i~~~~g~~ai~~~~~~l~~~gd~----Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 133 (404)
T 1e5e_A 66 NLEGKIAFLEKT-------E-ACVATSSGMGAIAATVLTILKAGDH----LISDECLYGCTHALFEHALTKFGIQVDFIN 133 (404)
T ss_dssp HHHHHHHHHHTC-------S-EEEEESSHHHHHHHHHHHHCCTTCE----EEEESCCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred HHHHHHHHHhCC-------C-cEEEeCChHHHHHHHHHHHhCCCCE----EEEeCCCchhHHHHHHHHHHHcCCEEEEEC
Confidence 899999999984 3 6777888889999999999999998 9999999999988 7888899999998
Q ss_pred CC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhh-cCcEEEEeecccCCCCC-cCCCCCCccEEEecccccc
Q 018172 116 GD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRS-AEGKLIHDLAYYWPQYT-PITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 116 ~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~-~~~~li~D~ay~~~~~~-~~~~~~~~~i~~~S~sK~~ 189 (360)
.+ .+.+.. ++++++|++++||||||.+++ +.+.++|++ +|+++|+|++|.++.+. ++ ..++++++.|+||.+
T Consensus 134 ~~d~~~l~~~i~~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~--~~~~di~~~S~sK~~ 211 (404)
T 1e5e_A 134 TAIPGEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPV--DFGVDVVVHSATKYI 211 (404)
T ss_dssp TTSTTHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGG--GGTCSEEEEETTTTT
T ss_pred CCCHHHHHHhcCCCCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCcc--ccCCEEEEEcCcccc
Confidence 74 444433 468999999999999999998 778899999 99999999999975432 22 357899999999999
Q ss_pred CCCCceE-EEEeecCHHHHH-HHHHHHhhc-cccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 018172 190 GHAGSRI-GWALVKDTEVAR-KMTRFIELG-SIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSG 266 (360)
Q Consensus 190 ~~~G~r~-G~~~~~~~~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 266 (360)
+.+|+|+ ||+++ ++++++ .+....... +.+.+++.|.++.+.++. +....+...++.+.+.+.+++.+
T Consensus 212 ~~~g~ri~G~~~~-~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~l~~~l~~~~ 282 (404)
T 1e5e_A 212 NGHTDVVAGLICG-KADLLQQIRMVGIKDITGSVISPHDAWLITRGLST--------LNIRMKAESENAMKVAEYLKSHP 282 (404)
T ss_dssp TCSSCCCCEEEEE-CHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT--------HHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCCCCeEEEEEE-CHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH--------HHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998 99999 788877 787766544 556888888888887762 23334445566667777777664
Q ss_pred CcccCCCCC--c--ccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCCC---------------------
Q 018172 267 VFGLPEYPL--E--YCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRFG--------------------- 320 (360)
Q Consensus 267 ~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~--------------------- 320 (360)
.+.....++ . .+.+......+.++|+.+++++. +++.+.+.+.|| +.+|..||
T Consensus 283 ~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~ 361 (404)
T 1e5e_A 283 AVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSGFEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEE 361 (404)
T ss_dssp TEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHH
T ss_pred CeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCCCHHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHH
Confidence 221110100 0 00000000123456666688765 667888889999 66665554
Q ss_pred -----CCCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 321 -----ADAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 321 -----~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
..++++|||++. |++++++++|++++..
T Consensus 362 ~~~~g~~~~~iRis~g~--e~~~~li~~l~~al~~ 394 (404)
T 1e5e_A 362 REAAGITDGMIRLSVGI--EDADELIADFKQGLDA 394 (404)
T ss_dssp HHHTTCCTTEEEEECCS--SCHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCeEEEEeCC--CCHHHHHHHHHHHHHH
Confidence 126799999977 7788888888888765
No 88
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.98 E-value=3.8e-31 Score=250.27 Aligned_cols=291 Identities=18% Similarity=0.173 Sum_probs=220.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh----cCCCCCCCceEEEeCCCCCC----cHHHHHHhCCe
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL----SSPGGPEPISVVSAAPYYSQ----YPAETDYLRSG 110 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l----~~~gd~~~~~vl~~~p~~~~----~~~~~~~~g~~ 110 (360)
+++|++++++++.. ++++|++|+|+++++..++..+ +++||+ |+++.|+|.. +...++..|++
T Consensus 75 ~~l~~~la~~~~~~-----~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~----Vl~~~~~~~~~~~~~~~~~~~~g~~ 145 (420)
T 1t3i_A 75 EAVRNKVAKFINAR-----SPREIVYTRNATEAINLVAYSWGMNNLKAGDE----IITTVMEHHSNLVPWQMVAAKTGAV 145 (420)
T ss_dssp HHHHHHHHHHTTCS-----CGGGEEEESSHHHHHHHHHHHTHHHHCCTTCE----EEEETTCCGGGTHHHHHHHHHHCCE
T ss_pred HHHHHHHHHHcCCC-----CCCeEEEcCChHHHHHHHHHHhhhcccCCCCE----EEECcchhHHHHHHHHHHHHhcCcE
Confidence 89999999998842 2468999999999999999999 899998 9999999999 45667788999
Q ss_pred eeeecCCccc-ccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEE
Q 018172 111 LYKWDGDANT-FDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIM 181 (360)
Q Consensus 111 ~~~~~~~~~~-~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~ 181 (360)
++.++.+.+. ++. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+.........+.+++
T Consensus 146 ~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~ 225 (420)
T 1t3i_A 146 LKFVQLDEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWL 225 (420)
T ss_dssp EEEECBCTTSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEE
T ss_pred EEEeccCCCCCcCHHHHHHhhCCCceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhcCCCEE
Confidence 9998876332 211 457899999999999999998 6778889999999999999986543311123357899
Q ss_pred EeccccccCCCCceEEEEeecCHHHHHHHHHHHhhc--------------------cccCChHHHHHHHH-HhcccCCCc
Q 018172 182 LFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELG--------------------SIGVSKESQLRAAK-ILGIVSDDY 240 (360)
Q Consensus 182 ~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~--------------------~~~~~~~~~~~~~~-~l~~~~~~~ 240 (360)
++|+||.+|++| +||+++ ++++++.+......+ ..+.+.+.|.++.. +++.+..
T Consensus 226 ~~s~sK~~~~~g--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-- 300 (420)
T 1t3i_A 226 VASGHKMCAPTG--IGFLYG-KEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTD-- 300 (420)
T ss_dssp EEEGGGTTSCTT--CEEEEE-CHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHH--
T ss_pred EEehhhhcCCCc--eEEEEE-chHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHH--
Confidence 999999999777 899998 788888876543211 13456666666554 4553321
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCC
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRR 318 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~ 318 (360)
..+++.+++++++++++.+.|++++++.+..+.... ...++++++.+++ ...+.+.|.++||.++||..
T Consensus 301 -~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~ 371 (420)
T 1t3i_A 301 -LGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKH--------GDRAALASFNVAGLHASDVATMVDQDGIAIRSGHH 371 (420)
T ss_dssp -HCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGG--------SCBCSEEEEEETTBCHHHHHHHHHTTTEECBCSCT
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccc--------cccCCEEEEEECCCCHHHHHHHHHHCCeEEeeccc
Confidence 357888999999999999999998666654443100 0012344555543 36677889999999999864
Q ss_pred C--------CCCCCeEEEEecC--ChHHHHHHHHHHHHHHhchhc
Q 018172 319 F--------GADAKYARVSMLS--REEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 319 f--------~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~~ 353 (360)
| +. ++++|+++.. +++++++++++|++++++.++
T Consensus 372 ~~~~~~~~~g~-~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~~~ 415 (420)
T 1t3i_A 372 CTQPLHRLFDA-SGSARASLYFYNTKEEIDLFLQSLQATIRFFSD 415 (420)
T ss_dssp TCHHHHHHTTC-CCCEEEECCTTCCHHHHHHHHHHHHHHHHHTC-
T ss_pred cchHHHHhcCC-CCeEEEecCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 4 32 6799999976 899999999999999876544
No 89
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.98 E-value=1.3e-30 Score=243.51 Aligned_cols=286 Identities=9% Similarity=0.019 Sum_probs=219.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCC--CcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCC--cHHHHHHhCCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDG--RHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQ--YPAETDYLRSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~--~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~--~~~~~~~~g~~~~~~ 114 (360)
.++|+.++++++. +. ++|++|+|+++++. ++..++++||+ |++++|+|.. +...++..|++++.+
T Consensus 38 ~~~~~~la~~~~~------~~~~~~v~~~~g~t~al~-~~~~~~~~gd~----vi~~~~~~~~~~~~~~~~~~g~~~~~v 106 (384)
T 3zrp_A 38 AYSLKGLRYVMGA------SKNYQPLIIPGGGTSAME-SVTSLLKPNDK----ILVVSNGVFGDRWEQIFKRYPVNVKVL 106 (384)
T ss_dssp HHHHHHHHHHHTC------CTTSEEEEEESCHHHHHH-HGGGGCCTTCE----EEEECSSHHHHHHHHHHTTSSCEEEEE
T ss_pred HHHHHHHHHHhCC------CCCCcEEEEcCCcHHHHH-HHHhhcCCCCE----EEEecCCcchHHHHHHHHHcCCcEEEe
Confidence 8899999999986 44 68999999999999 99999999998 9999999965 556677889999999
Q ss_pred cCCccc-ccc-------CC-CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEec
Q 018172 115 DGDANT-FDK-------NN-GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFT 184 (360)
Q Consensus 115 ~~~~~~-~~~-------~~-~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S 184 (360)
+.+.++ ++. ++ ++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+.........+.+++++|
T Consensus 107 ~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s 186 (384)
T 3zrp_A 107 RPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTA 186 (384)
T ss_dssp CCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEE
T ss_pred cCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccccCccccccccCCCEEEec
Confidence 876543 221 23 7999999999999999998 6788899999999999999986554433345578999999
Q ss_pred cccccCCCCceEEEEeecCHHHHHHH-------------HHHHhh---------cc-ccCChHHHHHHHHHhcccCCCch
Q 018172 185 LSKCTGHAGSRIGWALVKDTEVARKM-------------TRFIEL---------GS-IGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 185 ~sK~~~~~G~r~G~~~~~~~~~~~~l-------------~~~~~~---------~~-~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
+||.++ .+.++||+++ ++++++.+ ...... .. .+.+...+.++.++++.+..
T Consensus 187 ~~K~~~-~~~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~--- 261 (384)
T 3zrp_A 187 SQKALG-SAAGLGLLLL-SPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEK--- 261 (384)
T ss_dssp TTSTTC-CCSSEEEEEE-CHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHH---
T ss_pred Cccccc-CCCceEEEEE-CHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHh---
Confidence 999885 2344999998 78887777 222211 11 25566666666666664321
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCCC
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRRF 319 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~f 319 (360)
..+++.+++++++++++.+.|+++ ++.+..+.+.. ..++++|+.+++ ...+.+.|.++||.+++|..+
T Consensus 262 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~ 331 (384)
T 3zrp_A 262 EGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPES---------YSNTVTGVILKVADPQKVLAGTVNEGVEFAPGVHP 331 (384)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGG---------BCSSEEEEECSSSCHHHHHHHHHTTTCCCEECCCT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccc---------cCccEEEEECCCCCHHHHHHHHHHCCEEEecCCCC
Confidence 447899999999999999999998 55554443111 123356777764 377788888889999998744
Q ss_pred CCCCCeEEEEecC--ChHHHHHHHHHHHHHHhchh
Q 018172 320 GADAKYARVSMLS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 320 ~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
.. +++|+++.. ++|++++++++|++++++.+
T Consensus 332 ~~--~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 332 AF--KYFRIGHMGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp TC--CEEEEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred Cc--CEEEEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence 32 799999864 89999999999999998754
No 90
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.98 E-value=2.1e-31 Score=250.84 Aligned_cols=286 Identities=14% Similarity=0.079 Sum_probs=216.4
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh----cCCCCCCCceEEEeCCCCCCcH----HHHHHhCC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL----SSPGGPEPISVVSAAPYYSQYP----AETDYLRS 109 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l----~~~gd~~~~~vl~~~p~~~~~~----~~~~~~g~ 109 (360)
.+++|++++++++.. ++++|++|+|+++++..++..+ +++||+ |+++.|+|.+.. ..++..|+
T Consensus 69 ~~~l~~~la~~~~~~-----~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~----vl~~~~~~~~~~~~~~~~~~~~g~ 139 (406)
T 1kmj_A 69 MENVRKRASLFINAR-----SAEELVFVRGTTEGINLVANSWGNSNVRAGDN----IIISQMEHHANIVPWQMLCARVGA 139 (406)
T ss_dssp HHHHHHHHHHHTTCS-----CGGGEEEESSHHHHHHHHHHHTHHHHCCTTCE----EEEETTCCGGGTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCC-----CCCeEEEeCChhHHHHHHHHHhhhhcCCCCCE----EEEecccchHHHHHHHHHHHhCCC
Confidence 389999999998742 2468999999999999999999 889998 999999988654 34677899
Q ss_pred eeeeecCCcc------cccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccE
Q 018172 110 GLYKWDGDAN------TFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDI 180 (360)
Q Consensus 110 ~~~~~~~~~~------~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i 180 (360)
+++.++.+.+ .++. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+..+......+.++
T Consensus 140 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~ 219 (406)
T 1kmj_A 140 ELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDF 219 (406)
T ss_dssp EEEEECBCTTSCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSE
T ss_pred EEEEEecCCCCCcCHHHHHHHhccCCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCE
Confidence 9998887533 2221 467999999999999999999 677888999999999999998754321112336789
Q ss_pred EEeccccccCCCCceEEEEeecCHHHHHHHHHHHhh---------------------ccccCChHHHHHHH-HHhcccCC
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIEL---------------------GSIGVSKESQLRAA-KILGIVSD 238 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~---------------------~~~~~~~~~~~~~~-~~l~~~~~ 238 (360)
++.|+||.+|++| +||+++ ++++++.+...... ...+.+.+.+.++. ++++.+..
T Consensus 220 ~~~s~~K~~g~~G--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 296 (406)
T 1kmj_A 220 YVFSGHKLYGPTG--IGILYV-KEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSA 296 (406)
T ss_dssp EEEEGGGTTSCTT--CEEEEE-CHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHH
T ss_pred EEEEchhccCCCC--cEEEEE-eHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999888 899999 78888887543311 11335566666555 45553321
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCC
Q 018172 239 DYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGG 316 (360)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg 316 (360)
.++++.+++++++++++.+.|++++++.+..+. ..++++++.+++ ...+.+.|.++||.++||
T Consensus 297 ---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g 361 (406)
T 1kmj_A 297 ---LGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQ------------NRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTG 361 (406)
T ss_dssp ---HCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCT------------TCCSEEEEEETTCCHHHHHHHHHHTTEECEEE
T ss_pred ---cCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC------------CcCCEEEEEECCCCHHHHHHHHhhCCcEEEec
Confidence 357788999999999999999988666654441 012234444442 366778889999999998
Q ss_pred CCCCC-------CCCeEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 317 RRFGA-------DAKYARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 317 ~~f~~-------~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
..|.. .++++|+++.. ++|++++++++|+++++.
T Consensus 362 ~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 404 (406)
T 1kmj_A 362 HHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRL 404 (406)
T ss_dssp CTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 75321 25799999976 899999999999998764
No 91
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.98 E-value=1.8e-30 Score=243.64 Aligned_cols=285 Identities=14% Similarity=0.069 Sum_probs=214.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc--HHHHHHhCCeeeeecC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY--PAETDYLRSGLYKWDG 116 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~--~~~~~~~g~~~~~~~~ 116 (360)
+++|+.++++++. ++++|++|+|+++++..++..++++||+ |+++.|+|.++ ...++..|++++.++.
T Consensus 45 ~~l~~~la~~~g~------~~~~v~~t~g~t~a~~~~~~~~~~~gd~----Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 114 (392)
T 2z9v_A 45 EKVVDKAQKAMRL------SNKPVILHGEPVLGLEAAAASLISPDDV----VLNLASGVYGKGFGYWAKRYSPHLLEIEV 114 (392)
T ss_dssp HHHHHHHHHHTTC------SSCCEEESSCTHHHHHHHHHHHCCTTCC----EEEEESSHHHHHHHHHHHHHCSCEEEEEC
T ss_pred HHHHHHHHHHhCC------CCCEEEEeCCchHHHHHHHHHhcCCCCE----EEEecCCcccHHHHHHHHHcCCceEEeeC
Confidence 8999999999985 4468999999999999999999999998 99999999875 3445667999998887
Q ss_pred Cccc-ccc---------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecc
Q 018172 117 DANT-FDK---------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTL 185 (360)
Q Consensus 117 ~~~~-~~~---------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~ 185 (360)
+.++ ++. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+..+......+.+++++|+
T Consensus 115 ~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~ 194 (392)
T 2z9v_A 115 PYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGP 194 (392)
T ss_dssp CTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECS
T ss_pred CCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccccceEEEecC
Confidence 6433 211 357899999999999999988 67888899999999999999864432112234578999999
Q ss_pred ccc-cCCCCceEEEEeecCHHHHHHHHHHH--------------------hhccccCChHHHHHHHHHhcccCCCchhH-
Q 018172 186 SKC-TGHAGSRIGWALVKDTEVARKMTRFI--------------------ELGSIGVSKESQLRAAKILGIVSDDYPNF- 243 (360)
Q Consensus 186 sK~-~~~~G~r~G~~~~~~~~~~~~l~~~~--------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~- 243 (360)
||. ++++| +||+++ ++++++.+.... .....+.+...+.++.++++.+. .+
T Consensus 195 sK~~~~~~g--~G~l~~-~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~----~~g 267 (392)
T 2z9v_A 195 NKCLGAPPG--LTMMGV-SERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYL----NEG 267 (392)
T ss_dssp SSTTCCCSC--CEEEEE-CHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHH----HHC
T ss_pred cccccCCCc--eeEEEE-CHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHH----hcc
Confidence 995 45566 599998 788888876421 11223455666666666666332 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhh-CeeeeCCCCC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAE-RIMARGGRRF 319 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~-gI~~~pg~~f 319 (360)
+++.+++++++++++.+.|+++ ++.+..|.... ..++++++.+++ ...+.+.|.++ ||.+++|..+
T Consensus 268 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~ 337 (392)
T 2z9v_A 268 PEAVWARHALTAKAMRAGVTAM-GLSVWAASDSI---------ASPTTTAVRTPDGVDEKALRQAARARYGVVFSSGRGE 337 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGG---------BCTTEEEEECCTTCCHHHHHHHHHHHHCEECEECCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCeeccCCccc---------cCCceEEEECCCCCCHHHHHHHHHhcCCEEEecCCCC
Confidence 7788999999999999999987 55554422111 123366777752 36677777776 9999998865
Q ss_pred CCCCCeEEEEe-c--CChHHHHHHHHHHHHHHhch
Q 018172 320 GADAKYARVSM-L--SREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 320 ~~~~~~~R~s~-~--~~~e~~~~~~~~l~~~~~~~ 351 (360)
. .++++|+++ + .+++++++++++|++++++.
T Consensus 338 ~-~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~ 371 (392)
T 2z9v_A 338 T-LGKLTRIGHMGPTAQPIYAIAALTALGGAMNAA 371 (392)
T ss_dssp G-TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred C-CCCeEEEeCcccccCHHHHHHHHHHHHHHHHHc
Confidence 4 367999995 5 49999999999999998754
No 92
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.97 E-value=8.6e-31 Score=246.15 Aligned_cols=289 Identities=11% Similarity=0.033 Sum_probs=218.1
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCC-cEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH--HHHHHhCCeeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGR-HIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP--AETDYLRSGLYKW 114 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~-~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~--~~~~~~g~~~~~~ 114 (360)
..++|++++++++. +++ +|++|+|+++++..++..++++||+ |++++|+|..+. ..++..|++++.+
T Consensus 53 ~~~l~~~la~~~~~------~~~~~v~~~~g~t~al~~~~~~~~~~gd~----vl~~~~~~~~~~~~~~~~~~g~~~~~v 122 (396)
T 2ch1_A 53 MDEVKDGLRYIFQT------ENRATMCVSGSAHAGMEAMLSNLLEEGDR----VLIAVNGIWAERAVEMSERYGADVRTI 122 (396)
T ss_dssp HHHHHHHHHHHHTC------CCSCEEEESSCHHHHHHHHHHHHCCTTCE----EEEEESSHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHhCC------CCCcEEEECCcHHHHHHHHHHHhcCCCCe----EEEEcCCcccHHHHHHHHHcCCceEEe
Confidence 48999999999986 455 7999999999999999999999998 999999999984 4778889999999
Q ss_pred cCCccc-ccc-------CC-CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEec
Q 018172 115 DGDANT-FDK-------NN-GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFT 184 (360)
Q Consensus 115 ~~~~~~-~~~-------~~-~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S 184 (360)
+.+.+. ++. ++ ++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+..+......+.++++.|
T Consensus 123 ~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s 202 (396)
T 2ch1_A 123 EGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTG 202 (396)
T ss_dssp ECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECC
T ss_pred cCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccchhhcCcCEEEEc
Confidence 876432 221 23 6899999999999999998 6777888889999999999985433222234456788899
Q ss_pred cccccCCCCceEEEEeecCHHHHHHHHHHH-----------------------hhccccCChHHHHHHHHHhcccCCCch
Q 018172 185 LSKCTGHAGSRIGWALVKDTEVARKMTRFI-----------------------ELGSIGVSKESQLRAAKILGIVSDDYP 241 (360)
Q Consensus 185 ~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (360)
++|.++ .+.++|++++ ++++++.+.... .....+.+...|.++.++++.+. +
T Consensus 203 ~~K~~~-~~~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~---~ 277 (396)
T 2ch1_A 203 AQKVLG-APPGITPISI-SPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIA---E 277 (396)
T ss_dssp CC-CCC-CCSSCEEEEE-CHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHH---H
T ss_pred CCcccc-CCCCeEEEEE-CHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHH---H
Confidence 999765 3344699998 778887775320 11224567788888888777432 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHh-hCeeeeCCC
Q 018172 242 NFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRA-ERIMARGGR 317 (360)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~-~gI~~~pg~ 317 (360)
.++++.+++++++++++.+.|+++ ++.+..+.+.. ..+.++++.++. ...+.+.|.+ +||.+++|.
T Consensus 278 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~ 347 (396)
T 2ch1_A 278 EGLENQIKRRIECAQILYEGLGKM-GLDIFVKDPRH---------RLPTVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGL 347 (396)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHH-TCCBSSCSGGG---------BCTTEEEEECCTTCCHHHHHHHHHHHHCBCCBCCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHC-CCeeccCCccc---------cCCceEEEEcCCCCCHHHHHHHHHHhCCEEEecCc
Confidence 568889999999999999999988 55555444321 122356777652 3556666655 599999987
Q ss_pred CCCCCCCeEEEEe-cC--ChHHHHHHHHHHHHHHhchh
Q 018172 318 RFGADAKYARVSM-LS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 318 ~f~~~~~~~R~s~-~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
.+. .++++|+++ .. ++|++++++++|++++++.+
T Consensus 348 ~~~-~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~ 384 (396)
T 2ch1_A 348 GPT-FGKAWRVGIMGECSTVQKIQFYLYGFKESLKATH 384 (396)
T ss_dssp GGG-TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred ccc-CCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhC
Confidence 554 367999998 32 89999999999999997654
No 93
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.97 E-value=4.2e-31 Score=247.58 Aligned_cols=280 Identities=15% Similarity=0.086 Sum_probs=213.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHH----HHHhCCeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAE----TDYLRSGLYK 113 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~----~~~~g~~~~~ 113 (360)
+++|++++++++. ++++|++|+|+++++..++..+ +++||+ |+++.|+|..+... ++..|++++.
T Consensus 62 ~~l~~~la~~~g~------~~~~v~~~~g~t~a~~~~~~~~~~~~gd~----vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 131 (390)
T 1elu_A 62 AQLRQALAETFNV------DPNTITITDNVTTGCDIVLWGLDWHQGDE----ILLTDCEHPGIIAIVQAIAARFGITYRF 131 (390)
T ss_dssp HHHHHHHHHHTTS------CGGGEEEESSHHHHHHHHHHHSCCCTTCE----EEEETTCCHHHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHHcCC------CHHHEEEeCChHHHHHHHHhCCCCCCCCE----EEEecCcccHHHHHHHHHHHHhCcEEEE
Confidence 8999999999875 4568999999999999999999 899998 99999999997654 5667999999
Q ss_pred ecCCc--------ccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhh----hcCcEEEEeecccCCCCCcCCCCCCc
Q 018172 114 WDGDA--------NTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNR----SAEGKLIHDLAYYWPQYTPITGAADH 178 (360)
Q Consensus 114 ~~~~~--------~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~----~~~~~li~D~ay~~~~~~~~~~~~~~ 178 (360)
++.+. +.++. ++++++|++++|+||||.+++ +.+.++|+ ++|+++|+|++|..+..+......+.
T Consensus 132 v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~ 211 (390)
T 1elu_A 132 FPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEV 211 (390)
T ss_dssp ECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCC
T ss_pred EcCCCCCCccchHHHHHHhcCCCceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcCC
Confidence 88752 11211 357999999999999999998 67788888 89999999999986543322234567
Q ss_pred cEEEeccccccCCCCceEEEEeecCHHHHHHHHHH----------------------HhhccccCChHHHHHHHHHhccc
Q 018172 179 DIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRF----------------------IELGSIGVSKESQLRAAKILGIV 236 (360)
Q Consensus 179 ~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~----------------------~~~~~~~~~~~~~~~~~~~l~~~ 236 (360)
++++.|+||.+. .|.++||+++ ++++++.+... ......+.+...+.++.++++.+
T Consensus 212 d~~~~s~~K~~~-~~~g~G~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l 289 (390)
T 1elu_A 212 DYYAFTGHKWFA-GPAGVGGLYI-HGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLH 289 (390)
T ss_dssp SEEEEESSSTTC-CCTTCEEEEE-CTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHH
T ss_pred CEEEcccccccc-CCCceEEEEE-CHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHH
Confidence 899999999332 4566999999 67777766432 12223456677777776767644
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC---chHHHHHHHHhhCeee
Q 018172 237 SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK---EDEDCEKLLRAERIMA 313 (360)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gI~~ 313 (360)
.+. .++++.+++++++++++.+.|++++++.+..|. .+.++|++++++ +...+.+.|.++||.+
T Consensus 290 ~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v 356 (390)
T 1elu_A 290 QRQ--GTAEERYQAICQRSEFLWRGLNQLPHVHCLATS-----------APQAGLVSFTVDSPLGHRAIVQKLEEQRIYL 356 (390)
T ss_dssp HHH--CCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSS-----------CCSSSEEEEEECSSSCHHHHHHHHHHTTEEC
T ss_pred HHc--CCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCc-----------cccccEEEEEcCCCCCHHHHHHHHHHCCEEE
Confidence 321 358889999999999999999998666554331 123345555664 2366777778999999
Q ss_pred eCCCCCCCCCCeEEEEec--CChHHHHHHHHHHHHH
Q 018172 314 RGGRRFGADAKYARVSML--SREEIFNIFLERLSAI 347 (360)
Q Consensus 314 ~pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~ 347 (360)
++|. .++++|+++. .+++++++++++|+++
T Consensus 357 ~~~~----~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 357 RTIA----DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp EEET----TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred EecC----CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 9976 3579999985 4999999999998754
No 94
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.97 E-value=2e-30 Score=243.43 Aligned_cols=289 Identities=9% Similarity=0.020 Sum_probs=215.7
Q ss_pred cHHHHHHHHHHHhhcCCCCCCC-CcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH--HHHHHhCCeeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDG-RHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP--AETDYLRSGLYKW 114 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~-~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~--~~~~~~g~~~~~~ 114 (360)
..++|+.++++++. +. ++|++|+|+++++..++..++++||+ |+++.|+|..+. ..++..|++++.+
T Consensus 54 ~~~l~~~la~~~g~------~~~~~i~~~~g~t~a~~~~~~~~~~~gd~----vl~~~~~~~~~~~~~~~~~~g~~~~~v 123 (393)
T 2huf_A 54 MDDIKEGVRYLFQT------NNIATFCLSASGHGGMEATLCNLLEDGDV----ILIGHTGHWGDRSADMATRYGADVRVV 123 (393)
T ss_dssp HHHHHHHHHHHHTC------CCSEEEEESSCHHHHHHHHHHHHCCTTCE----EEEEESSHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHhCC------CCCcEEEEcCcHHHHHHHHHHHHhCCCCE----EEEECCCcchHHHHHHHHHcCCeeEEE
Confidence 38999999999985 33 37999999999999999999999998 999999998743 3456679999998
Q ss_pred cCCccc-ccc-------CC-CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEec
Q 018172 115 DGDANT-FDK-------NN-GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFT 184 (360)
Q Consensus 115 ~~~~~~-~~~-------~~-~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S 184 (360)
+.+.++ ++. ++ ++++|++++|+||||.+++ +.+.++|+++|+++|+|+++..+..+......+.++++.|
T Consensus 124 ~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s 203 (393)
T 2huf_A 124 KSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTG 203 (393)
T ss_dssp ECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECC
T ss_pred eCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhcCccEEEEC
Confidence 866432 211 23 7899999999999999988 6777888889999999999886443222234568899999
Q ss_pred cccc-cCCCCceEEEEeecCHHHHHHHHHHH----h-------------------hccccCChHHHHHHHHHhcccCCCc
Q 018172 185 LSKC-TGHAGSRIGWALVKDTEVARKMTRFI----E-------------------LGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 185 ~sK~-~~~~G~r~G~~~~~~~~~~~~l~~~~----~-------------------~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
+||. +|++|+ ||+++ ++++++.+.... . ....+.+...+.++.++++.+..
T Consensus 204 ~sK~l~g~~G~--G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-- 278 (393)
T 2huf_A 204 SQKVLGAPPGI--TPVSF-SHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACE-- 278 (393)
T ss_dssp SSSTTCCCSSC--EEEEE-CHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHH--
T ss_pred CCcccccCCCe--EEEEE-CHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHH--
Confidence 9996 567886 99999 799988887541 0 01124556666666666663321
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHh-hCeeeeCC
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRA-ERIMARGG 316 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~-~gI~~~pg 316 (360)
..+++.+++++++++++.+.|+++ ++.+..+.+. ..+.++++.++. ...+.+.|.+ +||.+++|
T Consensus 279 -~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g 346 (393)
T 2huf_A 279 -EGLPALIARHEDCAKRLYRGLQDA-GFELYADPKD----------RLSTVTTIKVPQGVDWLKAAQYAMKTYLVEISGG 346 (393)
T ss_dssp -HCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGG----------BCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCC
T ss_pred -hCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCccc----------cCCcEEEEEcCCCCCHHHHHHHHHHhCCEEEecC
Confidence 347888999999999999999988 5555443221 012256676652 3556666654 59999999
Q ss_pred CCCCCCCCeEEEEe-c--CChHHHHHHHHHHHHHHhchhcc
Q 018172 317 RRFGADAKYARVSM-L--SREEIFNIFLERLSAIQGGSISN 354 (360)
Q Consensus 317 ~~f~~~~~~~R~s~-~--~~~e~~~~~~~~l~~~~~~~~~~ 354 (360)
..|. .++++|+++ . .++|++++++++|++++++.+..
T Consensus 347 ~~~~-~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~~ 386 (393)
T 2huf_A 347 LGPT-AGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKPD 386 (393)
T ss_dssp CGGG-TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCC-
T ss_pred cccc-cCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcCCC
Confidence 8764 367999999 5 36889999999999999876543
No 95
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.97 E-value=1.2e-30 Score=245.39 Aligned_cols=279 Identities=14% Similarity=0.103 Sum_probs=216.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC-C
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG-D 117 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~-~ 117 (360)
+++|+.++++++. +++|++++| ++++..++..++++||. |+++.|+|..+...++..|.+++.++. |
T Consensus 91 ~~l~~~la~~~~~-------~~~i~~~sG-t~a~~~~l~~~~~~gd~----v~~~~~~~~~~~~~~~~~g~~~~~~~~~d 158 (399)
T 3tqx_A 91 KELEKDISEFLGT-------DDTILYSSC-FDANGGLFETLLGPEDA----IISDELNHASIIDGIRLCKAQRYRYKNNA 158 (399)
T ss_dssp HHHHHHHHHHHTC-------SEEEEESCH-HHHHHTTHHHHCCTTCE----EEEETTCCHHHHHHHHSCCSEEEEECTTC
T ss_pred HHHHHHHHHHHCC-------CcEEEECch-HHHHHHHHHHhcCCCCE----EEECCcccHHHHHHHHHcCCceeEeCCCC
Confidence 8999999999984 346666665 78999999999999998 999999999999999999999999874 3
Q ss_pred cccccc--C------CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC----cCC---C-CCCccE
Q 018172 118 ANTFDK--N------NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT----PIT---G-AADHDI 180 (360)
Q Consensus 118 ~~~~~~--~------~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~----~~~---~-~~~~~i 180 (360)
.+.++. + .++++|++++|+||||.+++ +.+.++|+++|+++|+|++|+.+... +.. + ..+.++
T Consensus 159 ~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di 238 (399)
T 3tqx_A 159 MGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDI 238 (399)
T ss_dssp TTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSE
T ss_pred HHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcE
Confidence 444432 1 17899999999999999999 67888899999999999999632111 111 1 246789
Q ss_pred EEeccccccCCCCceEEEEeecCHHHHHHHHHHHhh--ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIEL--GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
+++|+||.++ |.+.||+++ ++++++.+...... .+.+.+.+.+.++.++++... .++++.+++++++++++
T Consensus 239 ~~~s~sK~~~--g~~gG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~l 311 (399)
T 3tqx_A 239 LTGTLGKALG--GASGGYTSG-HKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLK----TEGPQLRKQLQENSRYF 311 (399)
T ss_dssp EEEESSSSSC--SSCCEEEEE-CHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHH----HTHHHHHHHHHHHHHHH
T ss_pred EEecchHhcc--cCceEEEEc-CHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHh----hccHHHHHHHHHHHHHH
Confidence 9999999998 334499998 89999998775322 234667777777777776321 55789999999999999
Q ss_pred HHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCC--CCCeEEEEec--
Q 018172 259 RQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGA--DAKYARVSML-- 331 (360)
Q Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~--~~~~~R~s~~-- 331 (360)
.+.|+++ ++.+.. +.++|+|+.+++. ..+.+.|.++||.+.|+..+.. ..+++|++++
T Consensus 312 ~~~L~~~-g~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~ 376 (399)
T 3tqx_A 312 RAGMEKL-GFQLVP--------------GNHPIIPVMLGDAQLATNMADHLLQEGIYVVGFSYPVVPMGKARIRVQMSAV 376 (399)
T ss_dssp HHHHHHH-TCCBCC--------------CSSSEEEEEEECHHHHHHHHHHHHHTTEECCEECTTTSCTTCEEEEEECCTT
T ss_pred HHHHHHc-CCCcCC--------------CCCCEEEEEeCCHHHHHHHHHHHHHCCCEEeeeCCCCCCCCCceEEEEeecC
Confidence 9999988 344332 3334678877653 6677777889999998765432 3569999996
Q ss_pred CChHHHHHHHHHHHHHHhch
Q 018172 332 SREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 332 ~~~e~~~~~~~~l~~~~~~~ 351 (360)
.++|++++++++|++++++.
T Consensus 377 ~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 377 HTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp CCHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 39999999999999998753
No 96
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.97 E-value=4.1e-30 Score=240.71 Aligned_cols=275 Identities=16% Similarity=0.144 Sum_probs=213.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC-C
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG-D 117 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~-~ 117 (360)
.++|++++++++. + +.+++++| ++++..++..+.++||. |+++.|+|..+...++..|.+++.++. |
T Consensus 87 ~~l~~~la~~~g~------~-~~i~~~sG-t~a~~~~~~~~~~~gd~----v~~~~~~~~~~~~~~~~~g~~~~~~~~~d 154 (384)
T 1bs0_A 87 QALEEELAEWLGY------S-RALLFISG-FAANQAVIAAMMAKEDR----IAADRLSHASLLEAASLSPSQLRRFAHND 154 (384)
T ss_dssp HHHHHHHHHHHTC------S-EEEEESCH-HHHHHHHHHHHCCTTCE----EEEETTCCHHHHHHHHTSSSEEEEECTTC
T ss_pred HHHHHHHHHHhCC------C-cEEEeCCc-HHHHHHHHHHhCCCCcE----EEEcccccHHHHHHHHHcCCCEEEeCCCC
Confidence 9999999999974 3 45666666 89999999999999998 999999999999999999999998874 3
Q ss_pred cccccc----C-CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC----cCCC--CCCccEEEecc
Q 018172 118 ANTFDK----N-NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT----PITG--AADHDIMLFTL 185 (360)
Q Consensus 118 ~~~~~~----~-~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~----~~~~--~~~~~i~~~S~ 185 (360)
.+.++. . ++++++++++||||||.+++ +.+.++|+++|+++|+|++|..+.+. .... ..+.+++++|+
T Consensus 155 ~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~ 234 (384)
T 1bs0_A 155 VTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTF 234 (384)
T ss_dssp HHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEES
T ss_pred HHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeec
Confidence 333322 1 24789999999999999998 67788899999999999999754321 1111 13456999999
Q ss_pred ccccCCCCceEEEEeecCHHHHHHHHHHHh--hccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 018172 186 SKCTGHAGSRIGWALVKDTEVARKMTRFIE--LGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIR 263 (360)
Q Consensus 186 sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 263 (360)
||.++++| ||+++ ++++++.+..... ..+.+.+.+.+.++.++++.+.. .+.++.+++++++++++.+.|+
T Consensus 235 sK~~~~~G---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~---~~~~~~~~~~~~~~~~l~~~L~ 307 (384)
T 1bs0_A 235 GKGFGVSG---AAVLC-SSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRS---DEGDARREKLAALITRFRAGVQ 307 (384)
T ss_dssp SSTTSSCC---EEEEE-CHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHS---HHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchhhccC---cEEEe-CHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHH
Confidence 99999777 99999 8999998876532 12336788888888877774321 2677899999999999999999
Q ss_pred hcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCC--CCCeEEEEecC--ChHH
Q 018172 264 QSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGA--DAKYARVSMLS--REEI 336 (360)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~--~~~~~R~s~~~--~~e~ 336 (360)
+++ +.+.. +.++|+|+.+++. ..+.+.|.++||.++||..|+. ..+++|++++. ++++
T Consensus 308 ~~g-~~~~~--------------~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~ 372 (384)
T 1bs0_A 308 DLP-FTLAD--------------SCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQD 372 (384)
T ss_dssp TSS-CEECS--------------CCSSBCCEEEESHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHH
T ss_pred hcC-CcccC--------------CCCCEEEEEeCCHHHHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHH
Confidence 873 33321 2334677877642 6677778888999999987753 34799999975 8999
Q ss_pred HHHHHHHHHHH
Q 018172 337 FNIFLERLSAI 347 (360)
Q Consensus 337 ~~~~~~~l~~~ 347 (360)
+++++++|+++
T Consensus 373 i~~~~~~l~~~ 383 (384)
T 1bs0_A 373 IDRLLEVLHGN 383 (384)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999999875
No 97
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.97 E-value=2.4e-30 Score=243.67 Aligned_cols=278 Identities=14% Similarity=0.101 Sum_probs=216.7
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC-
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG- 116 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~- 116 (360)
..++|++++++++. + ++|++++| ++++..++..++++||. |+++.|+|..+...++..|.+++.++.
T Consensus 92 ~~~l~~~la~~~g~------~-~~i~~~sG-s~a~~~~~~~~~~~gd~----v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 159 (401)
T 1fc4_A 92 HKELEQKLAAFLGM------E-DAILYSSC-FDANGGLFETLLGAEDA----IISDALNHASIIDGVRLCKAKRYRYANN 159 (401)
T ss_dssp HHHHHHHHHHHHTC------S-EEEEESCH-HHHHHTTHHHHCCTTCE----EEEETTCCHHHHHHHHTSCSEEEEECTT
T ss_pred HHHHHHHHHHHhCC------C-cEEEeCCh-HHHHHHHHHHHcCCCCE----EEEcchhHHHHHHHHHHcCCceEEECCC
Confidence 38999999999975 3 56666665 77888899999999998 999999999898889999999998874
Q ss_pred Ccccccc--C---C---CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeeccc-CCCCC------cCCC-CCCcc
Q 018172 117 DANTFDK--N---N---GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYY-WPQYT------PITG-AADHD 179 (360)
Q Consensus 117 ~~~~~~~--~---~---~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~-~~~~~------~~~~-~~~~~ 179 (360)
|.+.++. + + ++++|++++||||||.+++ +.+.++|+++|+++|+|++|+ +.... ...+ ..+.+
T Consensus 160 d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~d 239 (401)
T 1fc4_A 160 DMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVD 239 (401)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCS
T ss_pred CHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCc
Confidence 3343332 1 1 6899999999999999998 678888999999999999996 32211 1112 23568
Q ss_pred EEEecccccc-CCCCceEEEEeecCHHHHHHHHHHHh--hccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHH
Q 018172 180 IMLFTLSKCT-GHAGSRIGWALVKDTEVARKMTRFIE--LGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWN 256 (360)
Q Consensus 180 i~~~S~sK~~-~~~G~r~G~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 256 (360)
+++.|+||.+ +++| ||+++ ++++++.+..... ..+.+.+.+.|.++.++++.+. ..++.+++++++++
T Consensus 240 i~~~s~sK~~~~~~g---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~ 310 (401)
T 1fc4_A 240 IITGTLGKALGGASG---GYTAA-RKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVE-----AGSELRDRLWANAR 310 (401)
T ss_dssp EEEEESSSTTCSSSC---EEEEE-CHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHH
T ss_pred EEEecchhhccCCCC---EEEEc-CHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHH
Confidence 9999999999 6555 99999 8999999876542 1255788899999888887431 24678889999999
Q ss_pred HHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCC--CCeEEEEec
Q 018172 257 MLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGAD--AKYARVSML 331 (360)
Q Consensus 257 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~--~~~~R~s~~ 331 (360)
++.+.|+++ ++.+. + +.++|+|+++++. ..+.+.|.++||.++||..|+.. .+++|+++.
T Consensus 311 ~l~~~L~~~-g~~~~-~-------------~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~ 375 (401)
T 1fc4_A 311 QFREQMSAA-GFTLA-G-------------ADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMS 375 (401)
T ss_dssp HHHHHHHHT-TCCBC-C-------------SSSSEEEEEEECHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECC
T ss_pred HHHHHHHHc-CCccc-C-------------CCCCEEEEEcCChHHHHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeC
Confidence 999999987 34433 2 2344788888652 66777888889999999877642 468999997
Q ss_pred C--ChHHHHHHHHHHHHHHhch
Q 018172 332 S--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 332 ~--~~e~~~~~~~~l~~~~~~~ 351 (360)
. +++++++++++|++++++.
T Consensus 376 ~~~~~~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 376 AAHTPEQITRAVEAFTRIGKQL 397 (401)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHh
Confidence 3 8999999999999998754
No 98
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.97 E-value=8.7e-31 Score=244.73 Aligned_cols=288 Identities=15% Similarity=0.070 Sum_probs=213.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc----CCCCCCCceEEEeCCCCCCcHHHHHH---hCCee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS----SPGGPEPISVVSAAPYYSQYPAETDY---LRSGL 111 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~----~~gd~~~~~vl~~~p~~~~~~~~~~~---~g~~~ 111 (360)
.++|+.++++++. ++++|++|+|+++++..++..+. ++||+ |++++|+|+.+...+.. .|+++
T Consensus 46 ~~l~~~la~~~g~------~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~----Vl~~~~~~~~~~~~~~~~~~~g~~~ 115 (382)
T 4eb5_A 46 QEAREKVAKLVNG------GGGTVVFTSGATEANNLAIIGYAMRNARKGKH----ILVSAVEHMSVINPAKFLQKQGFEV 115 (382)
T ss_dssp HHHHHHHHHHHTC------TTEEEEEESSHHHHHHHHHHHHHHHHGGGCCE----EEEETTCCHHHHHHHHHHTTTTCEE
T ss_pred HHHHHHHHHHhCC------CCCeEEEcCchHHHHHHHHHHHHhhccCCCCE----EEECCCcchHHHHHHHHHHhCCcEE
Confidence 8999999999985 44689999999999999999997 88998 99999999988777654 69999
Q ss_pred eeecCCccc-ccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEE
Q 018172 112 YKWDGDANT-FDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIML 182 (360)
Q Consensus 112 ~~~~~~~~~-~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~ 182 (360)
+.++.+.++ ++. ++++++|++++|+||||.+++ +.+.++|+++|++ |+|++|..+..+......+.++++
T Consensus 116 ~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~ 194 (382)
T 4eb5_A 116 EYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLT 194 (382)
T ss_dssp EEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEE
T ss_pred EEeccCCCCccCHHHHHHHhcCCCeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCccccCCCEEE
Confidence 999876432 211 357899999999999999998 6788889989999 999999854322111223578999
Q ss_pred eccccccCCCCceEEEEeecCHHHHHHHHH----HHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 183 FTLSKCTGHAGSRIGWALVKDTEVARKMTR----FIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 183 ~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
+|+||.+|++| +||++++++..+..+.. .......+.+...+.++.++++.+. +.+++.+++++++++++
T Consensus 195 ~s~sK~~g~~g--~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~----~~~~~~~~~~~~~~~~l 268 (382)
T 4eb5_A 195 ISSNDIYGPKG--VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITA----MEWREEAERLRRLRDRI 268 (382)
T ss_dssp EETGGGTCCSS--CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
T ss_pred eehHHhcCCCc--eEEEEEccccccCceecCCCccccccCCCccHHHHHHHHHHHHHHH----HhHHHHHHHHHHHHHHH
Confidence 99999988767 78888844311111100 0112234556666666666666432 46788999999999999
Q ss_pred HHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCCCCC---------------
Q 018172 259 RQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRRFGA--------------- 321 (360)
Q Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~f~~--------------- 321 (360)
.+.|++++++.+..+.+. ..++++++.+++ .+.+.+.|.++||.+++|..|..
T Consensus 269 ~~~L~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~ 338 (382)
T 4eb5_A 269 IDNVLKIEESYLNGHPEK----------RLPNNVNVRFSYIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLK 338 (382)
T ss_dssp HHHHTTSTTEEECSCSSS----------BCTTEEEEEETTSCHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCC
T ss_pred HHHHhhCCCeEEeCCccc----------CCCCEEEEEeCCcCHHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCC
Confidence 999998866655444321 113355666652 36677788889999999976432
Q ss_pred ---CCCeEEEEecC--ChHHHHHHHHHHHHHHhchhc
Q 018172 322 ---DAKYARVSMLS--REEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 322 ---~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~~ 353 (360)
.++++||+++. ++|++++++++|++++++.++
T Consensus 339 ~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 339 HEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp HHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 15799999974 899999999999999977553
No 99
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.97 E-value=3.3e-30 Score=243.01 Aligned_cols=285 Identities=13% Similarity=0.093 Sum_probs=213.6
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh---cCCCCCCCceEEEeCCCCCCcHHHHHH----hCCe
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL---SSPGGPEPISVVSAAPYYSQYPAETDY----LRSG 110 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l---~~~gd~~~~~vl~~~p~~~~~~~~~~~----~g~~ 110 (360)
..++|++++++++. ++++|++|+|+++++..++.++ +++||+ |+++.|+|..+...+.. .|++
T Consensus 71 ~~~l~~~la~~~g~------~~~~v~~~~g~t~al~~~~~~l~~~~~~gd~----vi~~~~~~~~~~~~~~~~~~~~g~~ 140 (406)
T 3cai_A 71 LDAAREAVADLVNA------DPGGVVLGADRAVLLSLLAEASSSRAGLGYE----VIVSRLDDEANIAPWLRAAHRYGAK 140 (406)
T ss_dssp HHHHHHHHHHHHTC------CGGGEEEESCHHHHHHHHHHHTGGGGBTTCE----EEEETTSCGGGTHHHHHHHHHHBCE
T ss_pred HHHHHHHHHHHhCC------CCCeEEEeCChHHHHHHHHHHHhhccCCCCE----EEEcCCccHHHHHHHHHHHHhcCCe
Confidence 38999999999985 4468999999999999999887 788988 99999999987766554 6999
Q ss_pred eeeecCCc-c------cccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccE
Q 018172 111 LYKWDGDA-N------TFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDI 180 (360)
Q Consensus 111 ~~~~~~~~-~------~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i 180 (360)
++.++.+. + .++. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+..+......+.++
T Consensus 141 v~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~ 220 (406)
T 3cai_A 141 VKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADV 220 (406)
T ss_dssp EEEECCCTTTCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHHCCSE
T ss_pred EEEEecCcccCCcCHHHHHHHhCCCceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhcCCCE
Confidence 99988762 2 2211 468999999999999999998 788888999999999999998643321112345789
Q ss_pred EEeccccccCCCCceEE-EEeecCHHHHHHHHHHHh---------hccccCChHHHHHHHHHhcccCCC-----------
Q 018172 181 MLFTLSKCTGHAGSRIG-WALVKDTEVARKMTRFIE---------LGSIGVSKESQLRAAKILGIVSDD----------- 239 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G-~~~~~~~~~~~~l~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~----------- 239 (360)
++.|+||.+| ++ +| |+++ ++++++.+..... ....+.+...+.++.++++.+...
T Consensus 221 ~~~s~~K~~g-~~--~G~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~ 296 (406)
T 3cai_A 221 VTVNAHAWGG-PP--IGAMVFR-DPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRER 296 (406)
T ss_dssp EEEEGGGGTS-CS--CEEEEES-CHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHH
T ss_pred EEeehhhhcC-CC--cCeEEEE-ehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhh
Confidence 9999999887 55 89 9998 7888777654321 113445666665655566543221
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCC
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGR 317 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~ 317 (360)
+..++++.+++++++++++.+.|++++++.+..+... .+.++++.+++ ...+.+.|.++||.+++|.
T Consensus 297 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~g~ 365 (406)
T 3cai_A 297 LAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEA-----------QIPVVSFAVHKVPADRVVQRLADNGILAIANT 365 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSS-----------BCSEEEEEETTBCHHHHHHHHHHTTEECEECC
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccc-----------cCCEEEEEECCcCHHHHHHHHHHCCcEEecCC
Confidence 1126889999999999999999999866655443211 12256666653 3667778888999999987
Q ss_pred ------CCCC--CCCeEEEEecC--ChHHHHHHHHHHHHH
Q 018172 318 ------RFGA--DAKYARVSMLS--REEIFNIFLERLSAI 347 (360)
Q Consensus 318 ------~f~~--~~~~~R~s~~~--~~e~~~~~~~~l~~~ 347 (360)
.|+. ..+++|+++.. ++|++++++++|+++
T Consensus 366 ~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 366 GSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp SCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred hHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 4443 24799999976 799999999998753
No 100
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.97 E-value=1e-30 Score=243.90 Aligned_cols=285 Identities=15% Similarity=0.090 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc----CCCCCCCceEEEeCCCCCCcHHHHHH---hCCee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS----SPGGPEPISVVSAAPYYSQYPAETDY---LRSGL 111 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~----~~gd~~~~~vl~~~p~~~~~~~~~~~---~g~~~ 111 (360)
.++|+.++++++. ++++|++|+|+++++..++..+. ++||+ |+++.|+|+.+...+.. .|+++
T Consensus 46 ~~~~~~la~~~~~------~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~----vi~~~~~~~~~~~~~~~~~~~g~~~ 115 (382)
T 4hvk_A 46 QEAREKVAKLVNG------GGGTVVFTSGATEANNLAIIGYAMRNARKGKH----ILVSAVEHMSVINPAKFLQKQGFEV 115 (382)
T ss_dssp HHHHHHHHHHTTC------TTEEEEEESSHHHHHHHHHHHHHHHHGGGCCE----EEEETTCCHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHcCC------CcCeEEEECCchHHHHHHHHHhhhhhcCCCCE----EEECCCCcHHHHHHHHHHHhcCCEE
Confidence 6899999999885 55689999999999999999987 89998 99999999998876655 59999
Q ss_pred eeecCCccc-ccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEE
Q 018172 112 YKWDGDANT-FDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIML 182 (360)
Q Consensus 112 ~~~~~~~~~-~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~ 182 (360)
+.++.+.++ ++. ++++++|++++|+||||.+++ +.+.++|+++|+ +|+|++|..+.........+.++++
T Consensus 116 ~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~d~~~ 194 (382)
T 4hvk_A 116 EYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKIGADMLT 194 (382)
T ss_dssp EEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHTCSEEE
T ss_pred EEeccCCCCCcCHHHHHHHhccCceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcCCCEEE
Confidence 999876433 211 468899999999999999988 678889999999 9999998754332222234578999
Q ss_pred eccccccCCCCceEEEEeecCHHHHHHHHHH-------HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHH
Q 018172 183 FTLSKCTGHAGSRIGWALVKDTEVARKMTRF-------IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERW 255 (360)
Q Consensus 183 ~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 255 (360)
.|+||.+|++| +|++++.++. .+... ......+.+...+.++.++++.. ..++++.++++++++
T Consensus 195 ~s~~K~~g~~g--~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~----~~~~~~~~~~~~~~~ 265 (382)
T 4hvk_A 195 ISSNDIYGPKG--VGALWIRKEA---KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEIT----AMEWREEAERLRRLR 265 (382)
T ss_dssp EESGGGTSCTT--CEEEEEETTC---CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
T ss_pred EeHHHhcCCCc--eEEEEEcCcc---CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHH----HhhHHHHHHHHHHHH
Confidence 99999888777 6666663332 11111 11123445667777776666532 267889999999999
Q ss_pred HHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCCCCCC-----------
Q 018172 256 NMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRRFGAD----------- 322 (360)
Q Consensus 256 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~f~~~----------- 322 (360)
+++.+.|++++++.+..+.+.. .++++++.+++ .+.+.+.|.++||.+++|..|...
T Consensus 266 ~~l~~~L~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~ 335 (382)
T 4hvk_A 266 DRIIDNVLKIEESYLNGHPEKR----------LPNNVNVRFSYIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMAC 335 (382)
T ss_dssp HHHHHHHTTSTTEEECSCSSSB----------CTTEEEEEETTCCHHHHHHHHHHTTCBCBCC--------CCCHHHHHT
T ss_pred HHHHHHHhcCCCeEEeCCcccc----------CCCEEEEEECCCCHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHc
Confidence 9999999988777665544211 12244555543 377888889999999999876532
Q ss_pred -------CCeEEEEecC--ChHHHHHHHHHHHHHHhchhc
Q 018172 323 -------AKYARVSMLS--REEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 323 -------~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~~ 353 (360)
++++|++++. ++|++++++++|++++++.++
T Consensus 336 g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 336 GLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp TCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 5799999975 899999999999999987654
No 101
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.97 E-value=8e-30 Score=238.95 Aligned_cols=290 Identities=12% Similarity=0.073 Sum_probs=218.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCC--CcHHHHHHhCCeeeeecC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYS--QYPAETDYLRSGLYKWDG 116 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~--~~~~~~~~~g~~~~~~~~ 116 (360)
.++++.++++++. ..+++|++|+|+++++..++..++++||+ |+++.++|. .+...++..|.+++.++.
T Consensus 59 ~~l~~~la~~~~~-----~~~~~v~~~~gg~~al~~~~~~~~~~gd~----vl~~~~~~~~~~~~~~~~~~g~~~~~~~~ 129 (393)
T 3kgw_A 59 EEIKQGIQYVFQT-----RNPLTLVVSGSGHCAMETALFNLLEPGDS----FLTGTNGIWGMRAAEIADRIGARVHQMIK 129 (393)
T ss_dssp HHHHHHHHHHHTC-----CCSEEEEESCCTTTHHHHHHHHHCCTTCE----EEEEESSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHhCC-----CCCcEEEEeCCcHHHHHHHHHhcCCCCCE----EEEEeCCchhHHHHHHHHHcCCceEEEeC
Confidence 7889999998885 12335999999999999999999999998 999988874 236778888999999887
Q ss_pred Cccc-ccc-------CC-CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccc
Q 018172 117 DANT-FDK-------NN-GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLS 186 (360)
Q Consensus 117 ~~~~-~~~-------~~-~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~s 186 (360)
+.++ ++. ++ ++++|++++||||||.+++ +.+.++|+++|+++|+|++|..+.........+.++++.|+|
T Consensus 130 ~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~s 209 (393)
T 3kgw_A 130 KPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQ 209 (393)
T ss_dssp CTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESS
T ss_pred CCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCc
Confidence 6543 222 23 7899999999999999998 678888999999999999998544333334556789999999
Q ss_pred cccCCCCceEEEEeecCHHHHHHHHHHHh-----------------------hccccCChHHHHHHHHHhcccCCCchhH
Q 018172 187 KCTGHAGSRIGWALVKDTEVARKMTRFIE-----------------------LGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 187 K~~~~~G~r~G~~~~~~~~~~~~l~~~~~-----------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
|.++ .+.++||+++ ++++++.+..... ....+.+...+.++.++++... +..
T Consensus 210 K~~~-~~~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~---~~~ 284 (393)
T 3kgw_A 210 KVLN-APPGISLISF-NDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIA---EQG 284 (393)
T ss_dssp STTC-CCSSCEEEEE-CHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHH---HHC
T ss_pred cccc-CCCceeEEEE-CHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHH---Hhh
Confidence 9774 2334899998 8999888865321 1123557777777767666432 145
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhh-CeeeeCCCCC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAE-RIMARGGRRF 319 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~-gI~~~pg~~f 319 (360)
+++.+++++++++++.+.|+++ ++.+..+.+.. ..+.++++.+++ ...+.+.|.++ ||.+++|..+
T Consensus 285 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~ 354 (393)
T 3kgw_A 285 LENCWRRHREATAHLHKHLQEM-GLKFFVKDPEI---------RLPTITTVTVPAGYNWRDIVSYVLDHFSIEISGGLGP 354 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGG---------BCSSEEEEECCTTBCHHHHHHHHHHHHCEECBCCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhh---------cCCeEEEEeCCCCCCHHHHHHHHHHhCCEEEeCCccc
Confidence 7899999999999999999998 55554333222 112355666653 25666666666 9999998855
Q ss_pred CCCCCeEEEEe-cC--ChHHHHHHHHHHHHHHhchhc
Q 018172 320 GADAKYARVSM-LS--REEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 320 ~~~~~~~R~s~-~~--~~e~~~~~~~~l~~~~~~~~~ 353 (360)
. .++++|+++ +. +++++++++++|++++++.++
T Consensus 355 ~-~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~ 390 (393)
T 3kgw_A 355 T-EERVLRIGLLGYNATTENVDRVAEALREALQHCPK 390 (393)
T ss_dssp G-TTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCB
T ss_pred C-CCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhh
Confidence 4 367999998 53 899999999999999987543
No 102
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.97 E-value=1.7e-29 Score=234.30 Aligned_cols=284 Identities=10% Similarity=0.054 Sum_probs=213.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeC-CCCCC-cHHHHHHhCCeeeeecC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAA-PYYSQ-YPAETDYLRSGLYKWDG 116 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~-p~~~~-~~~~~~~~g~~~~~~~~ 116 (360)
.++|++++++++. + ...+++++|+|+++++..++..+.++||. |+++. ++|+. +..++...|++++.++.
T Consensus 40 ~~l~~~la~~~g~---~-~~~~~v~~~~g~t~a~~~~~~~~~~~gd~----vi~~~~~~~~~~~~~~~~~~g~~~~~v~~ 111 (366)
T 1m32_A 40 EQIRQQLTALATA---S-EGYTSVLLQGSGSYAVEAVLGSALGPQDK----VLIVSNGAYGARMVEMAGLMGIAHHAYDC 111 (366)
T ss_dssp HHHHHHHHHHHCS---S-SSEEEEEEESCHHHHHHHHHHHSCCTTCC----EEEEESSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHHhCC---C-CcCcEEEEecChHHHHHHHHHHhcCCCCe----EEEEeCCCccHHHHHHHHHhCCceEEEeC
Confidence 9999999999972 1 11247999999999999999999999998 77665 66764 56777888999998887
Q ss_pred Cccc-ccc---------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecc
Q 018172 117 DANT-FDK---------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTL 185 (360)
Q Consensus 117 ~~~~-~~~---------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~ 185 (360)
+.++ ++. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+..+......+.+++++|+
T Consensus 112 ~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~ 191 (366)
T 1m32_A 112 GEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSA 191 (366)
T ss_dssp CTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEES
T ss_pred CCCCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecC
Confidence 6432 211 235899999999999999998 67888899899999999999865433222334678999999
Q ss_pred cccc-CCCCceEEEEeecCHHHHHHHHHHH------------------hhccccCChHHHHHHHHHhcccCCCchhH--H
Q 018172 186 SKCT-GHAGSRIGWALVKDTEVARKMTRFI------------------ELGSIGVSKESQLRAAKILGIVSDDYPNF--F 244 (360)
Q Consensus 186 sK~~-~~~G~r~G~~~~~~~~~~~~l~~~~------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~ 244 (360)
||.+ +++ ++||+++ ++++++.+.... .....+.+...+.++.++++.+. .+ +
T Consensus 192 ~K~~~~~~--g~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~----~~g~~ 264 (366)
T 1m32_A 192 NKCIQGVP--GFAFVIA-REQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELA----KEGGV 264 (366)
T ss_dssp SSTTCCCS--SEEEEEE-EHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHH----HHTHH
T ss_pred cccccCCC--ceEEEEE-CHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHH----HccCH
Confidence 9976 544 4799999 777776653310 01124677777877777776432 33 6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-----hHHHHHHHHhhCeeeeCCCCC
Q 018172 245 EYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-----DEDCEKLLRAERIMARGGRRF 319 (360)
Q Consensus 245 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~gI~~~pg~~f 319 (360)
++.+++++++++++.+.|+++ ++.+..+... ..+.++|+.+++ ...+.+.|.++||.++||..|
T Consensus 265 ~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~ 333 (366)
T 1m32_A 265 AARHQRYQQNQRSLVAGMRAL-GFNTLLDDEL----------HSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVS 333 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGG----------BCSSEEEEECCCCTTCCHHHHHHHHHHTTEECEECCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHC-CCeeccCchh----------cCceEEEEEcCccCCCCHHHHHHHHHHCCEEEECCcCC
Confidence 788999999999999999988 4554333110 122367787763 267778888889999999877
Q ss_pred CCCCCeEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 320 GADAKYARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 320 ~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
+ .+++|++++. +++++++++++|++++++
T Consensus 334 ~--~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 334 Q--SDCFRIGNIGEVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp S--SCEEEEECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred C--CCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 3 6799999975 799999999999998764
No 103
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.97 E-value=4e-30 Score=237.42 Aligned_cols=283 Identities=13% Similarity=0.065 Sum_probs=211.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc--HHHHHHhCCeeeeecC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY--PAETDYLRSGLYKWDG 116 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~--~~~~~~~g~~~~~~~~ 116 (360)
+++|++++++++.. . ++++|++|+|+++++..++..+.+ |+ |+++.|+|..+ ...++..|++++.++.
T Consensus 36 ~~l~~~la~~~g~~---~-~~~~v~~t~g~t~a~~~~~~~~~~--d~----vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 105 (353)
T 2yrr_A 36 RAIQERLAALFDPG---E-GALVAALAGSGSLGMEAGLANLDR--GP----VLVLVNGAFSQRVAEMAALHGLDPEVLDF 105 (353)
T ss_dssp HHHHHHHHHHHCCC---T-TCEEEEESSCHHHHHHHHHHTCSC--CC----EEEEECSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHhCCC---C-CCceEEEcCCcHHHHHHHHHHhcC--Cc----EEEEcCCCchHHHHHHHHHcCCceEEEeC
Confidence 89999999999851 1 246899999999999999999986 66 99999998875 4556778999999987
Q ss_pred Cccc-ccc-------CC-CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccc
Q 018172 117 DANT-FDK-------NN-GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLS 186 (360)
Q Consensus 117 ~~~~-~~~-------~~-~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~s 186 (360)
+.++ ++. ++ ++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+..+......+.++++.|++
T Consensus 106 ~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 185 (353)
T 2yrr_A 106 PPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQ 185 (353)
T ss_dssp CTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTT
T ss_pred CCCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCcccccccccccccCceEEEecCc
Confidence 6442 221 23 7899999999999999998 677888998999999999997543321112234589999999
Q ss_pred ccc-CCCCceEEEEeecCHHHHHHHH-------------HH--HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHH
Q 018172 187 KCT-GHAGSRIGWALVKDTEVARKMT-------------RF--IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRL 250 (360)
Q Consensus 187 K~~-~~~G~r~G~~~~~~~~~~~~l~-------------~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (360)
|.+ +++| +||+++ ++++++.+. .. ......+.+...+.++.++++.+.. ..+++.+++
T Consensus 186 K~~~~~~g--~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~ 259 (353)
T 2yrr_A 186 KCLSAPPG--LAPIAA-SLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLE---EGVAARERR 259 (353)
T ss_dssp STTCCCSS--CEEEEE-CHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHH---HCHHHHHHH
T ss_pred ccccCCCc--eEEEEE-CHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH---hhHHHHHHH
Confidence 954 5566 799999 788877664 11 1122345677777777776764321 337888999
Q ss_pred HHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhhCeeeeCCCCCCCCCCeEE
Q 018172 251 MSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERIMARGGRRFGADAKYAR 327 (360)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~pg~~f~~~~~~~R 327 (360)
++++++++.+.|+++ ++.+..+.. ..+.++|+.+++ .+.+.+.|.++||.++||..|.. ++++|
T Consensus 260 ~~~~~~~l~~~L~~~-g~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~-~~~iR 326 (353)
T 2yrr_A 260 AREVYAWVLEELKAR-GFRPYPKAS-----------PLPTVLVVRPPEGVDADRLVRALYAEGVAVAGGIGPTR-GQVLR 326 (353)
T ss_dssp HHHHHHHHHHHHHHT-TCEESCSSS-----------BCTTEEEEECCTTCCHHHHHHHHHHTTEECEECCGGGT-TTCEE
T ss_pred HHHHHHHHHHHHHHC-CCccccCcc-----------CCCeEEEEECCCCCCHHHHHHHHHHCCEEEeCCccccC-CCeEE
Confidence 999999999999987 555443321 012245677652 36777888888999999987753 67999
Q ss_pred EEecC--ChHHHH-HHHHHHHHHHhc
Q 018172 328 VSMLS--REEIFN-IFLERLSAIQGG 350 (360)
Q Consensus 328 ~s~~~--~~e~~~-~~~~~l~~~~~~ 350 (360)
+++.. ++++++ +++++|++++++
T Consensus 327 i~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 327 LGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp EECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred EecCccCCHHHHHHHHHHHHHHHHhh
Confidence 99843 888888 999999998764
No 104
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.97 E-value=3.1e-31 Score=246.88 Aligned_cols=278 Identities=11% Similarity=0.063 Sum_probs=212.5
Q ss_pred HHHHHH-HHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeec--
Q 018172 39 PELAEA-INNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWD-- 115 (360)
Q Consensus 39 ~~lr~~-la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~-- 115 (360)
+++|+. ++++++. + +|++|+|+++++..++..++++||+ |+++.|+|..+...++..|++++.++
T Consensus 56 ~~l~~~~la~~~~~------~--~v~~~~g~t~a~~~~~~~~~~~gd~----vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 123 (371)
T 2e7j_A 56 HDFIHNQLPKFLGC------D--VARVTNGAREAKFAVMHSLAKKDAW----VVMDENCHYSSYVAAERAGLNIALVPKT 123 (371)
T ss_dssp HHHHHTHHHHHTTS------S--EEEEESSHHHHHHHHHHHHCCTTCE----EEEETTCCHHHHHHHHHTTCEEEEECCC
T ss_pred HHHHHHHHHHHcCC------C--EEEEeCChHHHHHHHHHHHhCCCCE----EEEccCcchHHHHHHHHcCCeEEEeecc
Confidence 999999 9999985 3 8999999999999999999999998 99999999999999999999999998
Q ss_pred CCcc------cccc--C-----CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEE
Q 018172 116 GDAN------TFDK--N-----NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIM 181 (360)
Q Consensus 116 ~~~~------~~~~--~-----~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~ 181 (360)
.+.+ .++. + +++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+..+......+.+++
T Consensus 124 ~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~ 203 (371)
T 2e7j_A 124 DYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFI 203 (371)
T ss_dssp CTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEE
T ss_pred cCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhcCCCEE
Confidence 6532 2211 2 67899999999999999988 6788889999999999999997543211223356799
Q ss_pred EeccccccCCCCceEEEEeecCHHHHHH-HHHHHh--hc-----cccCChHHHHHHHHHhcccCCCchhHHHHHHHHH--
Q 018172 182 LFTLSKCTGHAGSRIGWALVKDTEVARK-MTRFIE--LG-----SIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLM-- 251 (360)
Q Consensus 182 ~~S~sK~~~~~G~r~G~~~~~~~~~~~~-l~~~~~--~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-- 251 (360)
++|+||.++. +.|+||+++ ++++++. +..... .. ..+.+...+.++.++++.+. . +.++++
T Consensus 204 ~~s~sK~~~~-~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~---~~~~~~~~ 274 (371)
T 2e7j_A 204 VGSGHKSMAA-SGPIGVMGM-KEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVR----E---RIKRWDEE 274 (371)
T ss_dssp EEEHHHHSSC-CSSCEEEEE-CTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHH----H---HGGGHHHH
T ss_pred EecCCcCCCC-CCCcEEEEE-echhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHH----H---HHHHHHHH
Confidence 9999999884 459999999 6777666 654332 11 33455555555555555221 1 566777
Q ss_pred HHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCC-----CCCCeE
Q 018172 252 SERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFG-----ADAKYA 326 (360)
Q Consensus 252 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~-----~~~~~~ 326 (360)
+++++++.+.|+++ ++.+..+.. ..++++|+++++...+.+.|.++||.+.| ..+. ..++++
T Consensus 275 ~~~~~~l~~~L~~~-~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~gi~~~~-~~~~~~~~g~~~~~i 341 (371)
T 2e7j_A 275 VEKARRFAAEMEKL-GIKQLGDNP-----------HNHDLMFFHAEVLYEISKKAKGGRFFLYR-ELKSRKIHGIKPGLT 341 (371)
T ss_dssp HHHHHHHHHHHHHT-TCEEESSSS-----------CCSSEEEEECHHHHHHHHHSSSGGGHHHH-HHHHTTEECSCTTCC
T ss_pred HHHHHHHHHHHHHc-CcEEecCCC-----------ccCceEEEECCCHHHHHHHHHHCCEEEEe-ccccccccCCCCCce
Confidence 88889999999887 555443321 12347788876336677788899999988 4332 236799
Q ss_pred E-EEec---CChHHHHHHHHHHHHHHhc
Q 018172 327 R-VSML---SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 327 R-~s~~---~~~e~~~~~~~~l~~~~~~ 350 (360)
| ++++ .++|++++++++|++++++
T Consensus 342 Rii~~~~~~~~~~~i~~~~~~l~~~~~~ 369 (371)
T 2e7j_A 342 RYFKLSTYGLSDEEVDYVLNAFKEIIEK 369 (371)
T ss_dssp SEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeeccCCCHHHHHHHHHHHHHHHHh
Confidence 9 9997 5899999999999998864
No 105
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.97 E-value=2.8e-29 Score=236.83 Aligned_cols=287 Identities=12% Similarity=0.040 Sum_probs=218.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCc-EEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCC--cHHHHHHhCCeeeeec
Q 018172 39 PELAEAINNLHHVVDNAVSDGRH-IVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQ--YPAETDYLRSGLYKWD 115 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~-i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~--~~~~~~~~g~~~~~~~ 115 (360)
.++++.++++++. +.++ +++|+|+++++..++..++++||+ |+++.|+|.+ +...++..|++++.++
T Consensus 49 ~~~~~~la~~~~~------~~~~~v~~~~sgt~al~~~~~~~~~~gd~----Vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 118 (411)
T 3nnk_A 49 NEVMALYRGVFRT------ENRWTMLVDGTSRAGIEAILVSAIRPGDK----VLVPVFGRFGHLLCEIARRCRAEVHTIE 118 (411)
T ss_dssp HHHHHHHHHHHTC------CCSEEEEEESCHHHHHHHHHHHHCCTTCE----EEEEECSHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhCC------CCCcEEEECCCcHHHHHHHHHHhcCCCCE----EEEecCCchHHHHHHHHHHcCCeEEEEe
Confidence 7889999999885 3334 888999999999999999999998 9999999977 8888999999999998
Q ss_pred CCcccc-cc-------C-CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecc
Q 018172 116 GDANTF-DK-------N-NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTL 185 (360)
Q Consensus 116 ~~~~~~-~~-------~-~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~ 185 (360)
.+.++. +. + .++++|++++|+||||.+++ +.+.++|+++|+++|+|+++..+..+......+.++++.|+
T Consensus 119 ~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~ 198 (411)
T 3nnk_A 119 VPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGM 198 (411)
T ss_dssp CCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCS
T ss_pred cCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhccCCcEEEecC
Confidence 764322 11 2 27899999999999999988 67888899899999999998865443333455688999999
Q ss_pred ccccCCCCceEEEEeecCHHHHHHHHHHH------------------------------------hhccccCChHHHHHH
Q 018172 186 SKCTGHAGSRIGWALVKDTEVARKMTRFI------------------------------------ELGSIGVSKESQLRA 229 (360)
Q Consensus 186 sK~~~~~G~r~G~~~~~~~~~~~~l~~~~------------------------------------~~~~~~~~~~~~~~~ 229 (360)
||.++ .+.++||+++ ++++++.+.... .....+.+...+.++
T Consensus 199 ~K~l~-~~~g~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 276 (411)
T 3nnk_A 199 QKCLG-GPSGTSPITL-SARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGA 276 (411)
T ss_dssp TTTTC-CCSSEEEEEE-CHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHH
T ss_pred ccccC-CCCceEEEEE-CHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHH
Confidence 99744 3335899998 899988887543 112235567777777
Q ss_pred HHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHH
Q 018172 230 AKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLL 306 (360)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l 306 (360)
.++++.... ..+++.+++++++++++.+.|+++ ++.+..+.+. ..++++++.+++ .+.+.+.|
T Consensus 277 ~~al~~~~~---~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~l 342 (411)
T 3nnk_A 277 RECARLILQ---EGLDYGIARHKLHGDALVKGIQAM-GLETFGDLKH----------KMNNVLGVVIPQGINGDQARKLM 342 (411)
T ss_dssp HHHHHHHHH---HCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGG----------BCSSEEEEECCTTCCHHHHHHHH
T ss_pred HHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHHc-CCEeCCCccc----------ccccEEEEECCCCCCHHHHHHHH
Confidence 676664321 237889999999999999999987 4555444321 123467777753 25666666
Q ss_pred Hhh-CeeeeCCCCCCCCCCeEEEEe-cC--ChHHHHHHHHHHHHHHhchh
Q 018172 307 RAE-RIMARGGRRFGADAKYARVSM-LS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 307 ~~~-gI~~~pg~~f~~~~~~~R~s~-~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
.++ ||.+++|.... .++++|+++ .. ++|++++++++|++++++..
T Consensus 343 ~~~~gi~v~~g~~~~-~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 343 LEDFGIEIGTSFGPL-HGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp HHHHSEEEEECCGGG-TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred HHhcCeEEeCccCCC-CCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 554 99999985332 367999998 43 79999999999999997653
No 106
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.97 E-value=4e-30 Score=243.74 Aligned_cols=285 Identities=15% Similarity=0.102 Sum_probs=215.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcHHHHHHh---CCee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYPAETDYL---RSGL 111 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~~~~~~~---g~~~ 111 (360)
.++|+.++++++. ++++|++|+|+++++..++..+.+ +||. |+++.|+|+.+...+..+ |+++
T Consensus 71 ~~l~~~la~~~~~------~~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~----Vl~~~~~~~~~~~~~~~~~~~g~~~ 140 (423)
T 3lvm_A 71 DIARNQIADLVGA------DPREIVFTSGATESDNLAIKGAANFYQKKGKH----IITSKTEHKAVLDTCRQLEREGFEV 140 (423)
T ss_dssp HHHHHHHHHHHTC------CGGGEEEESSHHHHHHHHHHHHHHHHTTTCCE----EEEETTSCHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHcCC------CCCeEEEeCChHHHHHHHHHHHHHhhccCCCE----EEECCccchHHHHHHHHHHHcCCEE
Confidence 7899999999986 556899999999999999998873 7888 999999999998877544 9999
Q ss_pred eeecCCccc------ccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEE
Q 018172 112 YKWDGDANT------FDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIML 182 (360)
Q Consensus 112 ~~~~~~~~~------~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~ 182 (360)
+.++.+.++ ++. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+..+......+.++++
T Consensus 141 ~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~ 220 (423)
T 3lvm_A 141 TYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMS 220 (423)
T ss_dssp EEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSEEE
T ss_pred EEeccCCCCccCHHHHHHhcCCCcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCEEE
Confidence 999876432 211 468899999999999999998 67888999999999999999875543333455678999
Q ss_pred eccccccCCCCceEEEEeecCHHHHHHHHHHH-------hhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHH
Q 018172 183 FTLSKCTGHAGSRIGWALVKDTEVARKMTRFI-------ELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERW 255 (360)
Q Consensus 183 ~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 255 (360)
.|+||.+|++| +||+++ +++..+.+.... .....+.+...+.++.++++.+. .++++.++++++++
T Consensus 221 ~s~sK~~g~~g--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~----~~~~~~~~~~~~~~ 293 (423)
T 3lvm_A 221 FSGHKIYGPKG--IGALYV-RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAK----EEMATEMERLRGLR 293 (423)
T ss_dssp EESTTTTSCSS--CEEEEE-CBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
T ss_pred echHHhcCCCC--eEEEEE-eccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence 99999988777 899998 555555444322 12234566677777666666432 45889999999999
Q ss_pred HHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC--chHHHHHHHHhhCeeeeCCCCCCCC-----------
Q 018172 256 NMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--EDEDCEKLLRAERIMARGGRRFGAD----------- 322 (360)
Q Consensus 256 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gI~~~pg~~f~~~----------- 322 (360)
+++.+.|++++++.+..+.+.. .++++++.++ +...+.+.|.+ |.+.+|..|...
T Consensus 294 ~~l~~~L~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~ 361 (423)
T 3lvm_A 294 NRLWNGIKDIEEVYLNGDLEHG----------APNILNVSFNYVEGESLIMALKD--LAVSSGSACTSASLEPSYVLRAL 361 (423)
T ss_dssp HHHHHHHTTSTTEEEESCSTTB----------CTTEEEEEETTSCHHHHHHHTTT--EECBCCCC-----CCCCHHHHHH
T ss_pred HHHHHHHhcCCCEEEeCCcccc----------CCCeEEEEeCCCCHHHHHHHHhh--heeccCccccCCCccccHHHHHh
Confidence 9999999988776665444311 1123333333 23666777766 999998765421
Q ss_pred -------CCeEEEEecC--ChHHHHHHHHHHHHHHhchh
Q 018172 323 -------AKYARVSMLS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 323 -------~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
.+++|+++.. ++|++++++++|++++++.+
T Consensus 362 g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~ 400 (423)
T 3lvm_A 362 GLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLR 400 (423)
T ss_dssp TCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 4799999975 88999999999999997654
No 107
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.97 E-value=5.8e-29 Score=235.09 Aligned_cols=285 Identities=14% Similarity=0.044 Sum_probs=216.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEE-EcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCC--cHHHHHHhCCeeeeec
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIV-IGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQ--YPAETDYLRSGLYKWD 115 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~-~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~--~~~~~~~~g~~~~~~~ 115 (360)
.++|+.++++++. +.++++ +++|+++++..++..++++||+ |+++.|+|.. +...++..|++++.++
T Consensus 47 ~~l~~~la~~~g~------~~~~~~~~~~s~t~al~~~~~~l~~~gd~----Vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 116 (416)
T 3isl_A 47 NETMEMLRELFQT------KNRWAYPIDGTSRAGIEAVLASVIEPEDD----VLIPIYGRFGYLLTEIAERYGANVHMLE 116 (416)
T ss_dssp HHHHHHHHHHTTC------CCSEEEEEESCHHHHHHHHHHHHCCTTCE----EEEEESSHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhCC------CCCcEEEecCcHHHHHHHHHHHhcCCCCE----EEEecCCcccHHHHHHHHhcCCeeEEEe
Confidence 7889999999885 444555 8899999999999999999998 9999999987 6778888999999998
Q ss_pred CCcccc-cc-------C-CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecc
Q 018172 116 GDANTF-DK-------N-NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTL 185 (360)
Q Consensus 116 ~~~~~~-~~-------~-~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~ 185 (360)
.+.++. +. + +++++|++++||||||..++ +.+.++|+++|+++|+|++|+.+.........+.++++.|+
T Consensus 117 ~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~ 196 (416)
T 3isl_A 117 CEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGT 196 (416)
T ss_dssp CCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCS
T ss_pred cCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcCCCEEEecC
Confidence 764432 11 2 47899999999999999998 77888999999999999999865444333456688999999
Q ss_pred ccccCCCCceEEEEeecCHHHHHHHHHHH--------------------------------------hhccccCChHHHH
Q 018172 186 SKCTGHAGSRIGWALVKDTEVARKMTRFI--------------------------------------ELGSIGVSKESQL 227 (360)
Q Consensus 186 sK~~~~~G~r~G~~~~~~~~~~~~l~~~~--------------------------------------~~~~~~~~~~~~~ 227 (360)
||.++ .+.++|++++ ++++++.+...+ .....+.+...+.
T Consensus 197 ~K~l~-g~~g~g~~~~-~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (416)
T 3isl_A 197 QKCLS-VPSGMAPITY-NERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLY 274 (416)
T ss_dssp SSTTC-CCSSEEEEEE-CHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHH
T ss_pred ccccC-CCCCeEEEEE-CHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHH
Confidence 99643 3335899998 888888876421 1123355677777
Q ss_pred HHHHHhcccCCCchhH-HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHH
Q 018172 228 RAAKILGIVSDDYPNF-FEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCE 303 (360)
Q Consensus 228 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 303 (360)
++.++++... .+ +++.+++++++++++.+.|++. ++.+..+.+. ..+.++++.+++ .+.+.
T Consensus 275 a~~~al~~~~----~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~ 339 (416)
T 3isl_A 275 ALREGVRLVL----EEGLETRFERHRHHEAALAAGIKAM-GLRLFGDDSC----------KMPVVTCVEIPGGIDGESVR 339 (416)
T ss_dssp HHHHHHHHHH----HHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGG----------BCTTEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHH----HhhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCccc----------cCCcEEEEeCCCCCCHHHHH
Confidence 7777776432 44 8899999999999999999986 5555544321 122356777753 26666
Q ss_pred HHHHhh-CeeeeCCCCCCCCCCeEEEEecC--ChHH-HHHHHHHHHHHHhch
Q 018172 304 KLLRAE-RIMARGGRRFGADAKYARVSMLS--REEI-FNIFLERLSAIQGGS 351 (360)
Q Consensus 304 ~~l~~~-gI~~~pg~~f~~~~~~~R~s~~~--~~e~-~~~~~~~l~~~~~~~ 351 (360)
+.|.++ ||.+++|.... .++++|+++.. ++++ +++++++|++++++.
T Consensus 340 ~~L~~~~gi~v~~g~~~~-~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~ 390 (416)
T 3isl_A 340 DMLLAQFGIEIASSFGPL-AGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRH 390 (416)
T ss_dssp HHHHHHHCEECBCCCSTT-TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCEEEecCCCCC-CCCEEEEecccCCCcHHHHHHHHHHHHHHHHHc
Confidence 666665 99999987433 46799999933 5555 999999999999764
No 108
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.97 E-value=2.3e-29 Score=237.08 Aligned_cols=278 Identities=11% Similarity=0.057 Sum_probs=210.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc--CCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS--SPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG 116 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~--~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 116 (360)
+++|++++++++. +++|++|+|++ ++..++..+. .+||. |+++.|+|..+...++..|++++.++.
T Consensus 94 ~~l~~~la~~~~~-------~~~i~~~sG~~-a~~~~~~~l~~~~~gd~----Vl~~~~~~~~~~~~~~~~g~~~~~v~~ 161 (401)
T 2bwn_A 94 RRLEAEIAGLHQK-------EAALVFSSAYN-ANDATLSTLRVLFPGLI----IYSDSLNHASMIEGIKRNAGPKRIFRH 161 (401)
T ss_dssp HHHHHHHHHHTTC-------SEEEEESCHHH-HHHHHHHHHHHHSTTCE----EEEETTCCHHHHHHHHHSCCCEEEECT
T ss_pred HHHHHHHHHHhCC-------CcEEEECCcHH-HHHHHHHHHhcCCCCCE----EEECchhhHHHHHHHHHcCCeEEEEcC
Confidence 8999999999873 46899988876 6666666553 57887 999999999999999999999999987
Q ss_pred C-cccccc-----C-CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC----cCC---CC-CCccE
Q 018172 117 D-ANTFDK-----N-NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT----PIT---GA-ADHDI 180 (360)
Q Consensus 117 ~-~~~~~~-----~-~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~----~~~---~~-~~~~i 180 (360)
+ .+.++. + +++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+.+. ... +. .+.++
T Consensus 162 ~d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i 241 (401)
T 2bwn_A 162 NDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDI 241 (401)
T ss_dssp TCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSE
T ss_pred CCHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcE
Confidence 5 222221 1 57899999999999999998 67888899999999999999843221 111 11 13478
Q ss_pred EEeccccccCCCCceEEEEeecCHHHHHHHHHHHhh--ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIEL--GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
+++|+||+++++| ||+++ ++++++.+...... ...+.+++.+.++.++++.+.. ..+++.+++++++++++
T Consensus 242 ~~~s~sK~~~~~G---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~~~~l 314 (401)
T 2bwn_A 242 FNGTLAKAYGVFG---GYIAA-SARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKT---AEGQKLRDAQQMHAKVL 314 (401)
T ss_dssp EEEESSSTTCSCC---EEEEE-CHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTS---HHHHHHHHHHHHHHHHH
T ss_pred EEeechhhccCCC---CEEec-CHHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHh---cccHHHHHHHHHHHHHH
Confidence 9999999999888 99998 88888888754321 2234556777777777775432 34688899999999999
Q ss_pred HHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHH-HhhCeeeeCCCCCCCC--CCeEEEEecC
Q 018172 259 RQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLL-RAERIMARGGRRFGAD--AKYARVSMLS 332 (360)
Q Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l-~~~gI~~~pg~~f~~~--~~~~R~s~~~ 332 (360)
.+.|+++ ++.+..+. ++++|+.+++. ..+.+.| +++||.++|+..|+.. .+++|++++.
T Consensus 315 ~~~L~~~-g~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~ 379 (401)
T 2bwn_A 315 KMRLKAL-GMPIIDHG--------------SHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSP 379 (401)
T ss_dssp HHHHHHH-TCCBCCCS--------------SSCEEEECCCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCT
T ss_pred HHHHHHC-CCcccCCC--------------CCeEEEEeCChHHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeC
Confidence 9999987 55544332 23678888752 5566666 5889999999877642 3589999974
Q ss_pred --ChHHHHHHHHHHHHHHhc
Q 018172 333 --REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 333 --~~e~~~~~~~~l~~~~~~ 350 (360)
+++++++++++|++++++
T Consensus 380 ~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 380 VHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp TSCHHHHHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 899999999999998754
No 109
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.97 E-value=9.3e-30 Score=238.57 Aligned_cols=275 Identities=15% Similarity=0.063 Sum_probs=207.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCC-------------CCCCCceEEEeCCCCCCcHHHHH
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSP-------------GGPEPISVVSAAPYYSQYPAETD 105 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~-------------gd~~~~~vl~~~p~~~~~~~~~~ 105 (360)
.++++.++++++. ++++|++|+|+++++..++..+.++ ||+ |+++.|+|..+...++
T Consensus 72 ~~l~~~la~~~~~------~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~----vl~~~~~~~~~~~~~~ 141 (397)
T 3f9t_A 72 EKAVALLGSLLNN------KDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPK----IIVPITAHFSFEKGRE 141 (397)
T ss_dssp HHHHHHHHHHTTC------TTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCE----EEEETTCCTHHHHHHH
T ss_pred HHHHHHHHHHhCC------CCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeE----EEECCcchhHHHHHHH
Confidence 4566677777764 4568999999999999999998765 777 9999999999999999
Q ss_pred HhCCeeeeecCCccc-ccc-------CC-CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC-----
Q 018172 106 YLRSGLYKWDGDANT-FDK-------NN-GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT----- 170 (360)
Q Consensus 106 ~~g~~~~~~~~~~~~-~~~-------~~-~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~----- 170 (360)
..|++++.++.+.+. ++. ++ +++++++++|+||||.+.+ +.+.++|+++|+++|+|++|......
T Consensus 142 ~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~ 221 (397)
T 3f9t_A 142 MMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDK 221 (397)
T ss_dssp HHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGG
T ss_pred HcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccc
Confidence 999999999876432 221 24 7899999999999999988 67888899999999999999842211
Q ss_pred --------c-CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccc-----------cCChHHHHHHH
Q 018172 171 --------P-ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSI-----------GVSKESQLRAA 230 (360)
Q Consensus 171 --------~-~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~ 230 (360)
+ .... +.++++.|++|.++ +|.|+|+++++++.+.+.+......... +.+...+.++.
T Consensus 222 ~~~~~~~~~~~~~~-~~~~~~~s~~K~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 299 (397)
T 3f9t_A 222 YKKKGVNYKFDFSL-GVDSITIDPHKMGH-CPIPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVL 299 (397)
T ss_dssp GCCTTCCCCCSGGG-TCSEEECCTTTTTC-CCSSCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHH
T ss_pred cccccccccccccc-cCCeEEEccccccC-CCCCceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHH
Confidence 1 1123 67899999999776 7789999998666665554322211111 12344555554
Q ss_pred HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhC
Q 018172 231 KILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAER 310 (360)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 310 (360)
..+. ...+++..++++++++++.+.|+++ ++.+..+. .++++++..++...+.+.|.++|
T Consensus 300 ~~~~------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~g 359 (397)
T 3f9t_A 300 RYLG------REGQRKIVNECMENTLYLYKKLKEN-NFKPVIEP-------------ILNIVAIEDEDYKEVCKKLRDRG 359 (397)
T ss_dssp HHHH------HHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCC-------------SSSEEEEECTTHHHHHHHHHHTT
T ss_pred HHHh------HHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcCC-------------CccEEEEEeCCHHHHHHHHHhCC
Confidence 4443 2677888899999999999999998 45433332 23467888776677788888889
Q ss_pred eeeeCCCCCCCCCCeEEEEecC--ChHHHHHHHHHHHHHHh
Q 018172 311 IMARGGRRFGADAKYARVSMLS--REEIFNIFLERLSAIQG 349 (360)
Q Consensus 311 I~~~pg~~f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~ 349 (360)
|.+++|.. ++++|+++.. ++|++++++++|++++.
T Consensus 360 i~v~~~~~----~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 360 IYVSVCNC----VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp CBCEECSS----SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred eEEeccCC----CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 99999762 5799999974 89999999999999875
No 110
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.97 E-value=3.3e-29 Score=232.17 Aligned_cols=282 Identities=12% Similarity=0.126 Sum_probs=210.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCC-cHHHHHHhCCeeeeecCC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQ-YPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~-~~~~~~~~g~~~~~~~~~ 117 (360)
.++++.++++++. ..+++|++|+|++++++.++.++.++ +. +++..+.|.. +...++..|++++.++.+
T Consensus 46 ~~~~~~la~~~g~-----~~~~~v~~~~g~t~al~~~~~~l~~~-~~----i~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 115 (362)
T 3ffr_A 46 KTASDNLKTLLEL-----PSNYEVLFLASATEIWERIIQNCVEK-KS----FHCVNGSFSKRFYEFAGELGREAYKEEAA 115 (362)
T ss_dssp HHHHHHHHHHTTC-----CTTEEEEEESCHHHHHHHHHHHHCSS-EE----EEEECSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHhCC-----CCCcEEEEeCCchHHHHHHHHhccCC-cE----EEEcCcHHHHHHHHHHHHhCCCeEEEecC
Confidence 6677777777764 13468999999999999999999877 43 5566666662 334677789999988764
Q ss_pred c------cccccCCCeeEEEEcCCCCCCcccch-HHHHHHhhhc-CcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 118 A------NTFDKNNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSA-EGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 118 ~------~~~~~~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~-~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
. +.++.++++++|++++||||||.+++ +.+.++|+++ |+++|+|++|..+..+.... ..+++++|+||.+
T Consensus 116 ~~~~~d~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~--~~d~~~~s~~K~~ 193 (362)
T 3ffr_A 116 FGKGFYPADITVPADAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDWT--KIDSVFFSVQKCF 193 (362)
T ss_dssp TTCCCCGGGCCCCTTCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCTT--SCSEEEEETTSTT
T ss_pred CCCCCCHHHHhccCCccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccChh--HCcEEEEeccccc
Confidence 3 33334578999999999999999999 6777889999 99999999998654322111 2679999999999
Q ss_pred C-CCCceEEEEeecCHHHHHHHHHHHh---------------------hccccCChHHHHHHHHHhcccCCCchhHHHHH
Q 018172 190 G-HAGSRIGWALVKDTEVARKMTRFIE---------------------LGSIGVSKESQLRAAKILGIVSDDYPNFFEYG 247 (360)
Q Consensus 190 ~-~~G~r~G~~~~~~~~~~~~l~~~~~---------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (360)
+ ++| +|++++ ++++++.+..... ....+.+...+.++.++++.+.. ..+++.
T Consensus 194 ~~~~G--~g~~~~-~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~---~~~~~~ 267 (362)
T 3ffr_A 194 GLPAG--LGVWIL-NDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQ---ISADGI 267 (362)
T ss_dssp CCCSC--CEEEEE-EHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHH---HCHHHH
T ss_pred CCCCc--eEEEEE-CHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHH---ccHHHH
Confidence 8 777 577777 7888888876543 11455677777777777764322 337889
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-hHHHHHHHHhhCeeeeCCCCCCCCCCeE
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-DEDCEKLLRAERIMARGGRRFGADAKYA 326 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gI~~~pg~~f~~~~~~~ 326 (360)
+++++++++++.+.|++++++.+..+.... ....++|+.+++ ...+.+.|.++||.+++|..+. .++++
T Consensus 268 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~g~~~~-~~~~i 337 (362)
T 3ffr_A 268 RKQTEEKAALINTYIESSKVFSFGVEDAKL---------RSMTTIVANTTMLPGEINKILEPFDMAVGAGYGSK-KETQI 337 (362)
T ss_dssp HHHHHHHHHHHHHHHHHCSSEEESSSCGGG---------BCSSEEEEEESSCHHHHHHHHGGGTEEEEECSGGG-TTTEE
T ss_pred HHHHHHHHHHHHHHHHHccCceeccCChhh---------cCCceEEEecCCCHHHHHHHHHHCCeEEecCcccc-CCCEE
Confidence 999999999999999999777665533221 112256666664 4777888888899999986543 36799
Q ss_pred EEEecC--ChHHHHHHHHHHHHHH
Q 018172 327 RVSMLS--REEIFNIFLERLSAIQ 348 (360)
Q Consensus 327 R~s~~~--~~e~~~~~~~~l~~~~ 348 (360)
|+|+.. ++|++++++++|++++
T Consensus 338 Ris~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 338 RIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHT
T ss_pred EEECCCCCCHHHHHHHHHHHHHHh
Confidence 999865 8999999999999875
No 111
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.97 E-value=2.2e-29 Score=239.34 Aligned_cols=281 Identities=12% Similarity=0.088 Sum_probs=214.9
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC-
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG- 116 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~- 116 (360)
..+|++.++++++. + +.++++++++++..++..++++||. |+++.|+|..+...++..|.+++.++.
T Consensus 111 ~~~l~~~la~~~g~-------~-~~i~~~sGs~a~~~al~~l~~~gd~----vl~~~~~h~~~~~~~~~~g~~~~~~~~~ 178 (427)
T 2w8t_A 111 HMEVEQALRDFYGT-------T-GAIVFSTGYMANLGIISTLAGKGEY----VILDADSHASIYDGCQQGNAEIVRFRHN 178 (427)
T ss_dssp HHHHHHHHHHHHTC-------S-EEEEESCHHHHHHHHHHHHSCTTCE----EEEETTCCHHHHHHHHHSCSEEEEECTT
T ss_pred HHHHHHHHHHHhCC-------C-ceEEecCcHHHHHHHHHHhcCCCCE----EEECCcccHHHHHHHHHcCCeeEEeCCC
Confidence 38999999999974 3 3455555677888899999999998 999999999999999999999998873
Q ss_pred Ccccccc---C--C-CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCc----C---CC-CCCccEE
Q 018172 117 DANTFDK---N--N-GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTP----I---TG-AADHDIM 181 (360)
Q Consensus 117 ~~~~~~~---~--~-~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~----~---~~-~~~~~i~ 181 (360)
|.+.++. . + ++++|++++++||||.+++ +.+.++|+++|+++|+||+|..+.+.. . .+ ..+.+++
T Consensus 179 d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~ 258 (427)
T 2w8t_A 179 SVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFV 258 (427)
T ss_dssp CHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEE
T ss_pred CHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEE
Confidence 3333322 1 1 7899999999999999998 778889999999999999999643321 1 12 2356899
Q ss_pred EeccccccCCCCceEEEEeecCHHHHHHHHHHH-h-hccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHH
Q 018172 182 LFTLSKCTGHAGSRIGWALVKDTEVARKMTRFI-E-LGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLR 259 (360)
Q Consensus 182 ~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 259 (360)
+.||||.+|++| ||+++ ++++++.+.... . ..+.+.++..+.++.++++.+. .+++.+++++++++++.
T Consensus 259 ~~s~sK~~g~~g---G~v~~-~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~-----~~~~~~~~~~~~~~~l~ 329 (427)
T 2w8t_A 259 VGTFSKSVGTVG---GFVVS-NHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLM-----TAHEKRERLWSNARALH 329 (427)
T ss_dssp EEESSSTTCSCC---EEEEE-CCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHT-----SCHHHHHHHHHHHHHHH
T ss_pred EecchhhhccCC---CEEEe-CHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHHH
Confidence 999999999777 99998 778888776541 1 2244566666666667777432 25678899999999999
Q ss_pred HHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCC--CCCeEEEEecC--
Q 018172 260 QVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGA--DAKYARVSMLS-- 332 (360)
Q Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~--~~~~~R~s~~~-- 332 (360)
+.|+++ ++.+..+. ..++++|+.+++. ..+.+.|.++||.+.||..|+. ..+++|++++.
T Consensus 330 ~~L~~~-g~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~ 396 (427)
T 2w8t_A 330 GGLKAM-GFRLGTET------------CDSAIVAVMLEDQEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEH 396 (427)
T ss_dssp HHHHHH-TCEESCSS------------CCSSEEEEEESSHHHHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCTTC
T ss_pred HHHHHc-CCcccCCC------------CCCCEEEEEECCHHHHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCCCC
Confidence 999987 44433111 1334778888753 6677778888999999987764 24689999976
Q ss_pred ChHHHHHHHHHHHHHHhchh
Q 018172 333 REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 333 ~~e~~~~~~~~l~~~~~~~~ 352 (360)
+++++++++++|++++++..
T Consensus 397 t~e~i~~~~~~l~~~l~~~~ 416 (427)
T 2w8t_A 397 TPAQIQTVLGMFQAAGRAVG 416 (427)
T ss_dssp CHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999987653
No 112
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.97 E-value=4.3e-30 Score=241.68 Aligned_cols=283 Identities=13% Similarity=0.077 Sum_probs=194.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc----CCCC-CCCceEEEeCCCCCCcHHHHHH---hCCe
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS----SPGG-PEPISVVSAAPYYSQYPAETDY---LRSG 110 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~----~~gd-~~~~~vl~~~p~~~~~~~~~~~---~g~~ 110 (360)
.++|+.++++++. ++++|++|+|+++++..++..+. ++|| . |+++.++|+.+...+.. .|++
T Consensus 66 ~~l~~~la~~~~~------~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~----Vl~~~~~~~~~~~~~~~~~~~g~~ 135 (400)
T 3vax_A 66 ERAREYLASTVSA------EPDELIFTSGATESNNIALLGLAPYGERTGRRH----IITSAIEHKAVLEPLEHLAGRGFE 135 (400)
T ss_dssp HHHHHHHHHHTTC------CGGGEEEESCHHHHHHHHHHTTHHHHHHHTCCE----EEEETTSCHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHHHcCC------CCCcEEEeCCHHHHHHHHHHHHHHhhccCCCCE----EEECccccHhHHHHHHHHHhcCCe
Confidence 7888889998885 45689999999999999999998 8899 8 99999999988766655 5999
Q ss_pred eeeecCCccc------ccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEE
Q 018172 111 LYKWDGDANT------FDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIM 181 (360)
Q Consensus 111 ~~~~~~~~~~------~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~ 181 (360)
++.++.+.++ +.. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|+.+......... .+++
T Consensus 136 ~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~-~d~~ 214 (400)
T 3vax_A 136 VDFLTPGPSGRISVEGVMERLRPDTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTP-IDMI 214 (400)
T ss_dssp EEEECCCTTCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSC-CSEE
T ss_pred EEEEccCCCCCcCHHHHHHhcCCCceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhc-CcEE
Confidence 9999876432 221 468999999999999999988 77888999999999999999865433322333 7899
Q ss_pred EeccccccCCCCceEEEEe-ecCHHHH---HHHHHHH-------hhccccCChHHHHHHHHHhcccCCCchhHHHHHHHH
Q 018172 182 LFTLSKCTGHAGSRIGWAL-VKDTEVA---RKMTRFI-------ELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRL 250 (360)
Q Consensus 182 ~~S~sK~~~~~G~r~G~~~-~~~~~~~---~~l~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (360)
+.|+||.+|++| +|+++ +.++++. ..+.... .....+.+...+.++.++++.+. .++++.+++
T Consensus 215 ~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~----~~~~~~~~~ 288 (400)
T 3vax_A 215 SISGHKIGAPKG--VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFE----AEHAQWQVA 288 (400)
T ss_dssp EEETGGGTSCSS--CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHH----HSHHHHHHH
T ss_pred EEeHHHhCCCCc--eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHH----hhHHHHHHH
Confidence 999999888666 56666 6442111 1111111 22344566777777766666432 567899999
Q ss_pred HHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeeeCCCCCCC-------
Q 018172 251 MSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMARGGRRFGA------- 321 (360)
Q Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~pg~~f~~------- 321 (360)
++++++++.+.|+ .+++.+..+.+. ..++++++.+++ .+.+.+.|. +||.+++|..|..
T Consensus 289 ~~~~~~~l~~~L~-~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~ 356 (400)
T 3vax_A 289 AQDLRSRLLAGLA-STSFQVNGDQDH----------VVPHILNLSFEDVDAEAFLVTLK-DLVAVATGSASTSASFTPSH 356 (400)
T ss_dssp HHHHHHHHHHHHT-TTTCEECSCTTS----------BCTTEEEEECTTCCHHHHHHHHH-HHHHHTTTTEEEEEEECCHH
T ss_pred HHHHHHHHHHhhC-CCCEEEeCCccc----------CCCCEEEEEeCCCCHHHHHHHHh-cCcEEEecccccCCCCCccH
Confidence 9999999999999 766666554432 112355555553 377788888 9999999875532
Q ss_pred -------C----CCeEEEEe-cC--ChHHHHHHHHHHHHHHhc
Q 018172 322 -------D----AKYARVSM-LS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 322 -------~----~~~~R~s~-~~--~~e~~~~~~~~l~~~~~~ 350 (360)
. .+++||++ .. ++|++++++++|++++++
T Consensus 357 ~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 357 VLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp HHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred HHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 1 48999999 64 789999999999988753
No 113
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.96 E-value=1.5e-28 Score=229.81 Aligned_cols=291 Identities=10% Similarity=0.041 Sum_probs=213.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc---CCCCCCCceEEEe-CCCCCCc-HHHHHHhCCeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS---SPGGPEPISVVSA-APYYSQY-PAETDYLRSGLYK 113 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~---~~gd~~~~~vl~~-~p~~~~~-~~~~~~~g~~~~~ 113 (360)
.++|+.++++++.. ..++ +++|++|+|+++++..++..+. ++||+ |+++ .|.|... ...++..|++++.
T Consensus 41 ~~~~~~l~~~~~~~-~~~~-~~~v~~~~g~t~al~~~~~~~~~~~~~gd~----vlv~~~~~~~~~~~~~~~~~g~~~~~ 114 (385)
T 2bkw_A 41 QRVLKNTRAVFKSA-AASK-SQPFVLAGSGTLGWDIFASNFILSKAPNKN----VLVVSTGTFSDRFADCLRSYGAQVDV 114 (385)
T ss_dssp HHHHHHHHHHTTCC-GGGT-CEEEEEESCTTHHHHHHHHHHSCTTCSCCE----EEEECSSHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhCCC-CCCC-CceEEEcCchHHHHHHHHHHHhccCCCCCe----EEEEcCCcchHHHHHHHHHcCCceEE
Confidence 78899999998752 1122 3589999999999999999997 88987 8887 5566665 3677888999999
Q ss_pred ecC-Cccc-ccc-------CC-CeeEEEEcCCCCCCcccch-HHHHHHhhhc--CcEEEEeecccCCCCCcCCCCCCccE
Q 018172 114 WDG-DANT-FDK-------NN-GAYIEVVNSPNNPDGTIRE-AVLAKVNRSA--EGKLIHDLAYYWPQYTPITGAADHDI 180 (360)
Q Consensus 114 ~~~-~~~~-~~~-------~~-~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~--~~~li~D~ay~~~~~~~~~~~~~~~i 180 (360)
++. +.++ ++. ++ ++++|++++|+||||.+++ +.+.++|+++ |+++|+|++|..+..+......+.++
T Consensus 115 v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~ 194 (385)
T 2bkw_A 115 VRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDF 194 (385)
T ss_dssp ECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSE
T ss_pred EecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceE
Confidence 987 5332 221 23 7899999999999999988 6778888888 99999999998654322233456789
Q ss_pred EEecccccc-CCCCceEEEEeecCHHHHH-HHH------------------HH-Hhhc------cccCChHHHHHHHHHh
Q 018172 181 MLFTLSKCT-GHAGSRIGWALVKDTEVAR-KMT------------------RF-IELG------SIGVSKESQLRAAKIL 233 (360)
Q Consensus 181 ~~~S~sK~~-~~~G~r~G~~~~~~~~~~~-~l~------------------~~-~~~~------~~~~~~~~~~~~~~~l 233 (360)
++.|+||.+ +++| +||+++ ++++++ .+. .. .... ..+.+...+.++.+++
T Consensus 195 ~~~s~~K~~~~~~G--~G~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 271 (385)
T 2bkw_A 195 ALTASQKAIGAPAG--LSISLC-SSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVAL 271 (385)
T ss_dssp EEEESSSTTCCCSC--EEEEEE-CHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHH
T ss_pred EEecCccccccCCc--ceEEEE-cHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHH
Confidence 999999965 4567 599998 777766 442 11 0111 1356677777777777
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHH-HhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCee
Q 018172 234 GIVSDDYPNFFEYGRRLMSERWNMLRQVI-RQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIM 312 (360)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~ 312 (360)
+.+.. ..+++.+++++++++++.+.| +++ ++.+..+.+..+ ..++++|+.+++...+.+.|.++||.
T Consensus 272 ~~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~gi~ 339 (385)
T 2bkw_A 272 KEILE---EGLHKRWDLHREMSDWFKDSLVNGL-QLTSVSRYPSNM--------SAHGLTAVYVADPPDVIAFLKSHGVV 339 (385)
T ss_dssp HHHHH---HCHHHHHHHHHHHHHHHHHHHHTTT-CCEESSCSSSTT--------BCSSCEEEECSCHHHHHHHHHHTTEE
T ss_pred HHHHH---ccHHHHHHHHHHHHHHHHHHHHHhc-CceecccCcccc--------cCCceEEEecCCHHHHHHHHHHCCeE
Confidence 64321 237788899999999999999 887 455443321100 12447788887666677777889999
Q ss_pred eeCCCCCCCCCCeEEEE-ec-----CChHHHHHHHHHHHHHHhc
Q 018172 313 ARGGRRFGADAKYARVS-ML-----SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 313 ~~pg~~f~~~~~~~R~s-~~-----~~~e~~~~~~~~l~~~~~~ 350 (360)
+++|..+....+++|+| ++ .++|++++++++|++++++
T Consensus 340 v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 340 IAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp CBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred EeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 99988665456799999 75 3899999999999998865
No 114
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.96 E-value=1.2e-28 Score=231.98 Aligned_cols=288 Identities=13% Similarity=0.089 Sum_probs=205.4
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH----HHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET----DYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~----~~~g~~~~~ 113 (360)
..++|+.++++++. + +.++++++++++..++..++++||+ |+++.|+|.++...+ +..|.+++.
T Consensus 66 ~~~l~~~la~~~g~-------~-~~i~~~sG~~a~~~~l~~~~~~gd~----vi~~~~~~~~~~~~~~~~~~~~g~~~~~ 133 (398)
T 2rfv_A 66 TDALEKKLAVLERG-------E-AGLATASGISAITTTLLTLCQQGDH----IVSASAIYGCTHAFLSHSMPKFGINVRF 133 (398)
T ss_dssp HHHHHHHHHHHHTC-------S-EEEEESSHHHHHHHHHHHHCCTTCE----EEEESSSCHHHHHHHHTHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhCC-------C-cEEEECCHHHHHHHHHHHHhCCCCE----EEEcCCCcccHHHHHHHHHHHcCCEEEE
Confidence 38999999999984 3 4555555669999999999999998 999999999988776 778999999
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+ .+.+.. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+.... ....+.++++.|+||.+
T Consensus 134 v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~-~~~~~~di~~~s~sK~~ 212 (398)
T 2rfv_A 134 VDAAKPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQ-PLQLGADIVVHSVTKYI 212 (398)
T ss_dssp ECTTSHHHHHHHCCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC-GGGGTCSEEEEETTTTT
T ss_pred eCCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC-chhhCCcEEEEeCcccc
Confidence 8864 334432 467999999999999999998 678888999999999999998654322 12346899999999999
Q ss_pred CCCCceE-EEEeecCHHHHH-HHHHHHhhc-cccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 018172 190 GHAGSRI-GWALVKDTEVAR-KMTRFIELG-SIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSG 266 (360)
Q Consensus 190 ~~~G~r~-G~~~~~~~~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 266 (360)
+.+|+|+ ||+++ ++++++ .+....... +.+.+++.+.++.++++.+ ....+.+.++.+.+.+.|++++
T Consensus 213 ~~~g~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~l~~~l~~~~ 283 (398)
T 2rfv_A 213 NGHGDVIGGIIVG-KQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKTL--------GIRMERHCENALKIARFLEGHP 283 (398)
T ss_dssp TCSSCCCCEEEEE-CHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTTH--------HHHHHHHHHHHHHHHHHHHTCT
T ss_pred cCCCCceEEEEEE-CHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhhH--------HHHHHHHHHHHHHHHHHHHcCC
Confidence 8899998 99998 788776 666555544 5678888898888877621 2223445666777777887754
Q ss_pred CcccCCCCCc----ccccccccCCCCCCcccccCCch-HHHHHHHHhh---CeeeeCCCCCC------------------
Q 018172 267 VFGLPEYPLE----YCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAE---RIMARGGRRFG------------------ 320 (360)
Q Consensus 267 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~---gI~~~pg~~f~------------------ 320 (360)
.+.....++. .+.+......+.++++++++++. .....++.+. |+.+.+|..|.
T Consensus 284 ~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~ 363 (398)
T 2rfv_A 284 SITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEER 363 (398)
T ss_dssp TEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHH
T ss_pred CeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCHHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHH
Confidence 2211100000 00000000123566778888753 3444444444 88888886542
Q ss_pred ----CCCCeEEEEecC--ChHHHHHHHHHHHHH
Q 018172 321 ----ADAKYARVSMLS--REEIFNIFLERLSAI 347 (360)
Q Consensus 321 ----~~~~~~R~s~~~--~~e~~~~~~~~l~~~ 347 (360)
..++++|||++. ++++++++.++|+++
T Consensus 364 ~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 364 LKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp HHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 236899999977 678888888887654
No 115
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.96 E-value=1.9e-28 Score=234.53 Aligned_cols=287 Identities=12% Similarity=0.072 Sum_probs=198.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH----HHHhCCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE----TDYLRSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~----~~~~g~~~~~~ 114 (360)
.++++.++++++. + ++++++|+++++..++. ++++||+ |+++.|+|..+... ++..|++++.+
T Consensus 136 ~~l~~~la~~~g~-------~-~~i~~~sGt~al~~~l~-~~~~Gd~----Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v 202 (464)
T 1ibj_A 136 DALESLLAKLDKA-------D-RAFCFTSGMAALSAVTH-LIKNGEE----IVAGDDVYGGSDRLLSQVVPRSGVVVKRV 202 (464)
T ss_dssp HHHHHHHHHHHTC-------S-EEEEESSHHHHHHHHHT-TSCTTCE----EEEESSCCHHHHHHHHHTSGGGTCEEEEE
T ss_pred HHHHHHHHHHhCC-------C-eEEEECCHHHHHHHHHH-HhCCCCE----EEEECCCchhHHHHHHHHHHHcCCEEEEe
Confidence 4555666666652 3 67777777899988875 7889998 99999999998764 46679999998
Q ss_pred cCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC-CcCCCCCCccEEEecccccc
Q 018172 115 DGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY-TPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 115 ~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~-~~~~~~~~~~i~~~S~sK~~ 189 (360)
+.+ .+.++. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+.. .++ ..++++++.|+||.+
T Consensus 203 ~~~d~~~l~~~i~~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~--~~~~div~~S~sK~~ 280 (464)
T 1ibj_A 203 NTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPL--ELGADIVMHSATKFI 280 (464)
T ss_dssp CTTSHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGG--GTTCSEEEEETTTTT
T ss_pred CCCCHHHHHHHhccCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChh--hcCCEEEEECCcccc
Confidence 864 344433 468999999999999999998 6788889999999999999986532 122 257899999999988
Q ss_pred CC-CCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 190 GH-AGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 190 ~~-~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+. .|+|+||++++++++++.+.......+.+.+++.|.++.+.++.+. ..+++.. ++.+.+.+.+++++.+
T Consensus 281 ~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~~~----~r~~~~~----~~~~~l~~~l~~~~~v 352 (464)
T 1ibj_A 281 AGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMA----LRIEKQQ----ENARKIAMYLSSHPRV 352 (464)
T ss_dssp TCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTTHH----HHHHHHH----HHHHHHHHHHHTCTTC
T ss_pred cCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhHH----HHHHHHH----HHHHHHHHHHHhCCCc
Confidence 64 4999999999557898988877765567788888888877776221 2233222 2233344455443211
Q ss_pred ccCCCCC--c--ccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCC------------C----------C
Q 018172 269 GLPEYPL--E--YCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGR------------R----------F 319 (360)
Q Consensus 269 ~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~------------~----------f 319 (360)
.-.-..+ . .+.+......+.++++++.+++. ..+.+.|+..||.+++|. . +
T Consensus 353 ~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~ 432 (464)
T 1ibj_A 353 KKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREAR 432 (464)
T ss_dssp CEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSS
T ss_pred eEEECCCCCCCcchHHHhccCCCCceEEEEEECCHHHHHHHHHhcCcceEeecCCCCceeeecccccccccCCHHHHHhc
Confidence 0000000 0 00000001113456888888643 345566666899998885 1 1
Q ss_pred CCCCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 320 GADAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 320 ~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
|..++++|+|++. |++++++++|++++++
T Consensus 433 g~~~~~iRlsvg~--edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 433 GLTEDLVRISAGI--EDVDDLISDLDIAFKT 461 (464)
T ss_dssp SCCTTCEEEECCS--SCHHHHHHHHHHHHHS
T ss_pred CCCcCeEEEEeCC--CCHHHHHHHHHHHHhh
Confidence 2336799999976 8899999999999865
No 116
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.96 E-value=1.4e-28 Score=225.69 Aligned_cols=285 Identities=14% Similarity=0.138 Sum_probs=204.5
Q ss_pred HHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH----HHhCCeeeeec
Q 018172 40 ELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET----DYLRSGLYKWD 115 (360)
Q Consensus 40 ~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~----~~~g~~~~~~~ 115 (360)
+||++++++++. + +.+++++| ++++..++..++++||+ |+++.|+|..+...+ +..|.+++.++
T Consensus 2 ~l~~~la~~~g~------~-~~i~~~sG-~~a~~~~~~~~~~~g~~----v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 69 (331)
T 1pff_A 2 ALEGKIAKLEHA------E-ACAATASG-MGAIAASVWTFLKAGDH----LISDDCLYGCTHALFEHQLRKFGVEVDFID 69 (331)
T ss_dssp HHHHHHHHHHTC------S-EEEEESSH-HHHHHHHHHHHCCTTCE----EEEESCCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred hHHHHHHHHhCC------C-eEEEeCCh-HHHHHHHHHHhcCCCCE----EEEcCCCcchHHHHHHHHHHhcCCEEEEeC
Confidence 689999999985 3 45666665 89999999999999998 999999999987765 44799998887
Q ss_pred C-Ccccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhh-cCcEEEEeecccCCCC-CcCCCCCCccEEEecccccc
Q 018172 116 G-DANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRS-AEGKLIHDLAYYWPQY-TPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 116 ~-~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~-~~~~li~D~ay~~~~~-~~~~~~~~~~i~~~S~sK~~ 189 (360)
. |.+.+.. ++++++|++++|+||||.+++ +.+.++|++ +|+++|+|++|..+.. .++ ..++++++.|+||.+
T Consensus 70 ~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~--~~~~d~~~~s~~K~~ 147 (331)
T 1pff_A 70 MAVPGNIEKHLKPNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPL--DLGVDIVVHSATKYI 147 (331)
T ss_dssp TTSTTHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGG--GGTCSEEEEETTTTT
T ss_pred CCCHHHHHHhhcCCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChh--hcCCcEEEEECcccc
Confidence 4 3444433 467899999999999999998 778899999 9999999999985322 122 356899999999999
Q ss_pred CCCCce-EEEEeecCH-HHHHHHHHHHhh-ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 018172 190 GHAGSR-IGWALVKDT-EVARKMTRFIEL-GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSG 266 (360)
Q Consensus 190 ~~~G~r-~G~~~~~~~-~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 266 (360)
+.+|.| +||+++ ++ ++++.+...... .+.+.+++.+.++...++ .+....+...++.+.+.+.+++.+
T Consensus 148 ~~~~~r~~G~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~--------~~~~~~~~~~~~~~~~~~~l~~~~ 218 (331)
T 1pff_A 148 NGHTDVVAGLVCS-RADIIAKVKSQGIKDITGAIISPHDAWLITRGTL--------TLDMRVKRAAENAQKVAEFLHEHK 218 (331)
T ss_dssp SSSSSCCCEEEEE-CHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCCCceEEEEEe-CcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcc--------hHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999 799998 66 899888876654 456777888777655554 233334445556666666666553
Q ss_pred CcccCCCCC--c--ccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCC------------------------
Q 018172 267 VFGLPEYPL--E--YCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRR------------------------ 318 (360)
Q Consensus 267 ~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~------------------------ 318 (360)
.+.....++ . .+.+......+.++++.+.+++.+.+.+.|.++||.+++.+.
T Consensus 219 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~ 298 (331)
T 1pff_A 219 AVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDGLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEERE 298 (331)
T ss_dssp TCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHH
T ss_pred CeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHH
Confidence 211100000 0 000000011234567777777557888999999998876531
Q ss_pred -CCCCCCeEEEEecC--ChHHHHHHHHHHHHH
Q 018172 319 -FGADAKYARVSMLS--REEIFNIFLERLSAI 347 (360)
Q Consensus 319 -f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~ 347 (360)
++..++++|+|+.. +++++++++++|+++
T Consensus 299 ~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 299 AAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp HTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred hcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 22336899999977 678888888887653
No 117
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.96 E-value=1.2e-28 Score=230.13 Aligned_cols=266 Identities=11% Similarity=-0.005 Sum_probs=186.8
Q ss_pred CcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH---HHHHhCCeeeeecCCcccccc-CCCeeE-EEEcC
Q 018172 60 RHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA---ETDYLRSGLYKWDGDANTFDK-NNGAYI-EVVNS 134 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~-~~~~~~-i~~~~ 134 (360)
+++++|+|+++++..++..+ +||+ |+++.|+|+.+.. .++..|++++.+ .|.+.+.. ++++++ |++++
T Consensus 77 ~~~~~~~ggt~a~~~~~~~~--~gd~----Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-~d~~~l~~~~~~~~~~v~~~~ 149 (374)
T 2aeu_A 77 DKCVGFNRTSSAILATILAL--KPKK----VIHYLPELPGHPSIERSCKIVNAKYFES-DKVGEILNKIDKDTLVIITGS 149 (374)
T ss_dssp EEEEEESSHHHHHHHHHHHH--CCSE----EEEECSSSSCCTHHHHHHHHTTCEEEEE-SCHHHHHTTCCTTEEEEEECB
T ss_pred ceEEEEcChHHHHHHHHHhC--CCCE----EEEecCCCCccHHHHHHHHHcCcEEEEe-CCHHHHHhcCCCccEEEEEcc
Confidence 58999999999999999988 8998 9999999887655 677789999888 66554433 457899 99999
Q ss_pred CCCCCc-ccch-HHHHHHhhhcCcEEEEeecccCCC----CCcCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHH
Q 018172 135 PNNPDG-TIRE-AVLAKVNRSAEGKLIHDLAYYWPQ----YTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVAR 208 (360)
Q Consensus 135 p~NPtG-~~~~-~~~~~~~~~~~~~li~D~ay~~~~----~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~ 208 (360)
|||||| ...+ +.+.++|+++|+++|+|++|.... ........+.+++++|+||.+ +|+|+||+++ ++++++
T Consensus 150 p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l--~g~~~G~~~~-~~~~~~ 226 (374)
T 2aeu_A 150 TMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLM--EGPRGGLLAG-KKELVD 226 (374)
T ss_dssp CTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSS--SSCSCEEEEE-EHHHHH
T ss_pred CCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccc--cCcceEEEEE-CHHHHH
Confidence 999999 4444 577788888999999999997431 110011235689999999985 5789999998 789999
Q ss_pred HHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHH----HHHHHHHHHhc---CCccc-CCCCCccccc
Q 018172 209 KMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSER----WNMLRQVIRQS---GVFGL-PEYPLEYCNF 280 (360)
Q Consensus 209 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~l~~~l~~~---~~~~~-~~~~~~~~~~ 280 (360)
.+.......+.+.+++.|.++.++++.+. ...+++..+..+.. ++.+.+.|..+ .++.+ ..+.+.+
T Consensus 227 ~l~~~~~~~~~~~~~~~~~a~~~al~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~--- 300 (374)
T 2aeu_A 227 KIYIEGTKFGLEAQPPLLAGIYRALKNFN---LERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFV--- 300 (374)
T ss_dssp HHHHHHHTTTCBCCHHHHHHHHHHHHHCC---HHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEE---
T ss_pred HHHHhhccccCCCCHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEE---
Confidence 99887765556788899988888887431 11222222222222 45555555543 12222 2233322
Q ss_pred ccccCCCCCCcccccCCch-------HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC-C--hHHHHHHHHHHHHHHhc
Q 018172 281 TGKFTNSHPGFAWLESKED-------EDCEKLLRAERIMARGGRRFGADAKYARVSMLS-R--EEIFNIFLERLSAIQGG 350 (360)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~-~--~e~~~~~~~~l~~~~~~ 350 (360)
|.|.+.++. +.+.++++++||.++||..|....+++||+++. + +++++++.+++++.+.+
T Consensus 301 ----------~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~ 370 (374)
T 2aeu_A 301 ----------IKRVYKDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKM 370 (374)
T ss_dssp ----------EEEEESSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHH
T ss_pred ----------EEeecccccccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHH
Confidence 344444332 145577888999999998775456799999965 2 23478888888887765
Q ss_pred h
Q 018172 351 S 351 (360)
Q Consensus 351 ~ 351 (360)
.
T Consensus 371 ~ 371 (374)
T 2aeu_A 371 A 371 (374)
T ss_dssp H
T ss_pred H
Confidence 3
No 118
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.96 E-value=2.1e-28 Score=231.42 Aligned_cols=284 Identities=13% Similarity=0.062 Sum_probs=209.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc------CCCCCCCceEEEeCCCCCCcHHHH----HHh-
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS------SPGGPEPISVVSAAPYYSQYPAET----DYL- 107 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~------~~gd~~~~~vl~~~p~~~~~~~~~----~~~- 107 (360)
.++|+.++++++. ++++|++|+|+++++..++..++ ++||+ .|+++.++|+.+...+ +..
T Consensus 74 ~~l~~~la~~~g~------~~~~v~~~~g~t~al~~al~~~~~~~~~~~~gd~---vii~~~~~~~~~~~~~~~~~~~~~ 144 (416)
T 1qz9_A 74 ERLGNRLATLIGA------RDGEVVVTDTTSINLFKVLSAALRVQATRSPERR---VIVTETSNFPTDLYIAEGLADMLQ 144 (416)
T ss_dssp HHHHHHHHTTTTC------CTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCC---EEEEETTSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCC------CcccEEEeCChhHHHHHHHHhhcccccccCCCCc---EEEEcCCCCCchHHHHHHHHHHhc
Confidence 7899999998875 44689999999999998888876 88886 2455556887655443 234
Q ss_pred -CCeeeeecCCcccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEe
Q 018172 108 -RSGLYKWDGDANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLF 183 (360)
Q Consensus 108 -g~~~~~~~~~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~ 183 (360)
|++++.++. .+.++. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+.........+.++++.
T Consensus 145 ~g~~~~~v~~-~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~ 223 (416)
T 1qz9_A 145 QGYTLRLVDS-PEELPQAIDQDTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIG 223 (416)
T ss_dssp SSCEEEEESS-GGGHHHHCSTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEE
T ss_pred CCceEEEeCc-HHHHHHHhCCCceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEe
Confidence 999998876 444433 467899999999999999988 678888998999999999998643321112234689999
Q ss_pred ccccccCCCCceE-EEEeecCHHHHHHHHHHH-----------------------hhccccCChHHHHHHHHHhcccCCC
Q 018172 184 TLSKCTGHAGSRI-GWALVKDTEVARKMTRFI-----------------------ELGSIGVSKESQLRAAKILGIVSDD 239 (360)
Q Consensus 184 S~sK~~~~~G~r~-G~~~~~~~~~~~~l~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (360)
|+||.++ +|.++ |++++ ++++++.+.... .....+.+...+.++.++++.+..
T Consensus 224 s~~K~l~-~g~~~~g~l~~-~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~- 300 (416)
T 1qz9_A 224 CTYKYLN-GGPGSQAFVWV-SPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQ- 300 (416)
T ss_dssp CSSSTTC-CCTTCCCEEEE-CTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTT-
T ss_pred cCcccCC-CCCCCeEEEEE-CHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHh-
Confidence 9999875 67778 99998 677766554321 112234667777777777765432
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhc-C--CcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCC
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQS-G--VFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGG 316 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg 316 (360)
..+++.+++++++++++.+.|+++ + ++.+..+.+.. ..++++|+.+++...+.+.|.++||.+...
T Consensus 301 --~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~l~~~gi~~~~~ 369 (416)
T 1qz9_A 301 --TDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHA---------KRGSHVSFEHPEGYAVIQALIDRGVIGDYR 369 (416)
T ss_dssp --SCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGG---------GBCSEEEEECTTHHHHHHHHHTTTEECEEE
T ss_pred --cCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHH---------HcCCEEEEecCCHHHHHHHHHhCCcEeccC
Confidence 457889999999999999999886 4 55554443210 123467888876677778888899997531
Q ss_pred CCCCCCCCeEEEEecC---ChHHHHHHHHHHHHHHhch
Q 018172 317 RRFGADAKYARVSMLS---REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 317 ~~f~~~~~~~R~s~~~---~~e~~~~~~~~l~~~~~~~ 351 (360)
..+++|+++.. +++++++++++|++++++.
T Consensus 370 -----~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 370 -----EPRIMRFGFTPLYTTFTEVWDAVQILGEILDRK 402 (416)
T ss_dssp -----TTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred -----CCCeEEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence 36799999962 9999999999999998753
No 119
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.96 E-value=1.1e-27 Score=224.48 Aligned_cols=288 Identities=13% Similarity=0.125 Sum_probs=206.9
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH----HHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE----TDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~----~~~~g~~~~~ 113 (360)
..++|++++++++. + +.|++++| ++++..++..++++||+ |+++.|+|.+.... ++..|.+++.
T Consensus 54 ~~~l~~~la~~~~~------~-~~i~~~sG-t~a~~~~~~~~~~~g~~----vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 121 (386)
T 1cs1_A 54 RDVVQRALAELEGG------A-GAVLTNTG-MSAIHLVTTVFLKPGDL----LVAPHDCYGGSYRLFDSLAKRGCYRVLF 121 (386)
T ss_dssp HHHHHHHHHHHHTC------S-EEEEESSH-HHHHHHHHHHHCCTTCE----EEEETTCCHHHHHHHHHHHTTTSCEEEE
T ss_pred HHHHHHHHHHHhCC------C-cEEEeCCH-HHHHHHHHHHHhCCCCE----EEEecCCcHhHHHHHHHHHHhcCCEEEE
Confidence 38999999999985 3 56777666 99999999999999998 99999999975553 3667999998
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+ .+.+.. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+..... ...+.++++.|+||.+
T Consensus 122 ~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~-~~~~~di~~~s~sK~~ 200 (386)
T 1cs1_A 122 VDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNP-LALGADLVLHSCTKYL 200 (386)
T ss_dssp ECTTCHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCG-GGGTCSEEEEETTTTT
T ss_pred eCCCCHHHHHHhhccCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCc-cccCceEEEEcCcccc
Confidence 8763 333332 357899999999999999988 7788889999999999999986543221 2356889999999999
Q ss_pred CCCCceE-EEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 190 GHAGSRI-GWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 190 ~~~G~r~-G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+.+|.|+ ||++++++++++.+.......+.+.++..+.++.+.++ .+....+.+.++++.+.+.|++++.+
T Consensus 201 ~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~--------~~~~~~~~~~~~~~~l~~~l~~~~~l 272 (386)
T 1cs1_A 201 NGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLR--------TLVPRMELAQRNAQAIVKYLQTQPLV 272 (386)
T ss_dssp TCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHT--------THHHHHHHHHHHHHHHHHHHTTCTTE
T ss_pred cCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhccc--------HHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 9899887 99998556898998877665556678888777666554 24455666777888888888876543
Q ss_pred ccCCCCC--c--ccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCC------------------------
Q 018172 269 GLPEYPL--E--YCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRF------------------------ 319 (360)
Q Consensus 269 ~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f------------------------ 319 (360)
.....++ . .+.+......+.++++.+.+++. +.+.+.|.++||.+++.+ +
T Consensus 273 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-~g~~~sl~~~~~~~~~~~~~~~~~~ 351 (386)
T 1cs1_A 273 KKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAES-LGGVESLISHAATMTHAGMAPEARA 351 (386)
T ss_dssp EEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSCHHHHHHHHHTCSSSEEBSC-CCSSSCEEEEGGGTTTTTSCHHHHH
T ss_pred EEEECCCCCCCccHHHHHHhcCCCceEEEEEECCCHHHHHHHHHhCCcceEccc-CCCcceeeecccccccccCCHHHHH
Confidence 2110110 0 00000000123456777777654 778888889999987421 2
Q ss_pred --CCCCCeEEEEecC--ChHHHHHHHHHHHHH
Q 018172 320 --GADAKYARVSMLS--REEIFNIFLERLSAI 347 (360)
Q Consensus 320 --~~~~~~~R~s~~~--~~e~~~~~~~~l~~~ 347 (360)
|..++++|+|+.. ++++++.+.++|+++
T Consensus 352 ~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 352 AAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp HHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred hcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 2235899999976 456666666666554
No 120
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.96 E-value=6.5e-29 Score=230.77 Aligned_cols=278 Identities=11% Similarity=0.026 Sum_probs=202.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCC-c-EEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc--HHHHHHhCCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGR-H-IVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY--PAETDYLRSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~-~-i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~--~~~~~~~g~~~~~~ 114 (360)
+++|+.++++++. +++ + +++|+|++++++.++.+++++||+ |+++.+.+... ...++..| +++.+
T Consensus 52 ~~~~~~la~~~g~------~~~~~~i~~t~g~t~a~~~~~~~l~~~gd~----vl~~~~~~~~~~~~~~~~~~g-~~~~v 120 (362)
T 2c0r_A 52 NEAQARLLALLGN------PTGYKVLFIQGGASTQFAMIPMNFLKEGQT----ANYVMTGSWASKALKEAKLIG-DTHVA 120 (362)
T ss_dssp HHHHHHHHHHTTC------CSSEEEEEESSHHHHHHHHHHHHHCCTTCE----EEEEECSHHHHHHHHHHHHHS-CEEEE
T ss_pred HHHHHHHHHHhCC------CCCcEEEEECCCchHHHHHHHHhcCCCCCe----EEEEecCcHhHHHHHHHHHhC-CeEEE
Confidence 6777777777775 432 5 578899999999999999999998 88876654432 35677789 98887
Q ss_pred cCCc---cc-------cccCCCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEec
Q 018172 115 DGDA---NT-------FDKNNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFT 184 (360)
Q Consensus 115 ~~~~---~~-------~~~~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S 184 (360)
+.+. .+ +..++++++|++++|+||||..+++ +.++ +|+++++|++|..+..+.... +.++++.|
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~~~t~~v~~~~~~n~tG~~~~~-l~~i---~~~~vivD~a~~~~~~~~~~~--~~d~~~~s 194 (362)
T 2c0r_A 121 ASSEASNYMTLPKLQEIQLQDNAAYLHLTSNETIEGAQFKA-FPDT---GSVPLIGDMSSDILSRPFDLN--QFGLVYAG 194 (362)
T ss_dssp EECGGGTTCSCCCGGGCCCCTTEEEEEEESEETTTTEECSS-CCCC---TTSCEEEECTTTTTSSCCCGG--GCSEEEEE
T ss_pred ecccccccccCCCHHHcccCCCcCEEEEeCCcCccceeccc-cccc---CCCEEEEEChhhccCCccchh--HCcEEEEe
Confidence 7542 11 1225689999999999999997552 2222 799999999998654332112 23688999
Q ss_pred cccccCCCCceEEEEeecCHHHHHHHHHH------------HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHH
Q 018172 185 LSKCTGHAGSRIGWALVKDTEVARKMTRF------------IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMS 252 (360)
Q Consensus 185 ~sK~~~~~G~r~G~~~~~~~~~~~~l~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 252 (360)
+||.+|++| +||+++ ++++++.+.+. ......+.+.+.|.++.++++.+.+. ..+++.+++++
T Consensus 195 ~~K~~g~~G--~G~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~--~~~~~~~~~~~ 269 (362)
T 2c0r_A 195 AQKNLGPSG--VTVVIV-REDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEER--GGLEGVQQANR 269 (362)
T ss_dssp TTTTTCCSS--CEEEEE-EGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHT--THHHHHHHHHH
T ss_pred ccccccCcC--cEEEEE-cHHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHh--CCHHHHHHHHH
Confidence 999999888 999998 66766555321 11234577888888888888754321 26899999999
Q ss_pred HHHHHHHHHHHhcCCc-ccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEE
Q 018172 253 ERWNMLRQVIRQSGVF-GLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARV 328 (360)
Q Consensus 253 ~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~ 328 (360)
++++++.+.|++++++ .+..+.. . ..+.++++.+++. ..+.+.|.++||.+.||..+ .+++|+
T Consensus 270 ~~~~~l~~~L~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~L~~~gi~~~~g~~~---~~~iRi 336 (362)
T 2c0r_A 270 KKASLIYDAIDQSGGFYRGCVDVD-S---------RSDMNITFRLASEELEKEFVKASEQEGFVGLKGHRS---VGGLRA 336 (362)
T ss_dssp HHHHHHHHHHHTSTTSSEESSCGG-G---------BCSSEEEEECSCHHHHHHHHHHHHHTTEESCBCCTT---TCSEEE
T ss_pred HHHHHHHHHHHHcCCccccCCChH-H---------cCCcEEEEEcCCcchHHHHHHHHHHCCCeeccCCCC---CCEEEE
Confidence 9999999999998633 3322111 0 1122567777642 66777889999999988766 357999
Q ss_pred EecC--ChHHHHHHHHHHHHHHhch
Q 018172 329 SMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 329 s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
|++. ++|++++++++|++++++.
T Consensus 337 s~~~~~~~e~i~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 337 SIYNAVPYESCEALVQFMEHFKRSR 361 (362)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 9975 8999999999999988643
No 121
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.96 E-value=6.7e-28 Score=227.72 Aligned_cols=275 Identities=17% Similarity=0.136 Sum_probs=207.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC-C
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG-D 117 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~-~ 117 (360)
.++++.++++++. ++.+++ +++++++..++..++++||. |+++.|+|..+...+...|++++.++. |
T Consensus 107 ~~l~~~la~~~g~-------~~~i~~-~sGt~a~~~~l~~~~~~gd~----Vl~~~~~~~~~~~~~~~~g~~~~~~~~~d 174 (409)
T 3kki_A 107 PMIEKRLAKFTGF-------DECLLS-QSGWNANVGLLQTICQPNTN----VYIDFFAHMSLWEGARYANAQAHPFMHNN 174 (409)
T ss_dssp CHHHHHHHHHHTC-------SEEEEE-SCHHHHHHHHHHHHCCTTCE----EEEETTSCHHHHHHHHHTTCEEEEECTTC
T ss_pred HHHHHHHHHHhCC-------CeEEEe-cchHHHHHHHHHHhcCCCCE----EEECCCcCHHHHHHHHHcCCeEEEecCCC
Confidence 7899999999884 334555 45579999999999999998 999999999999999999999998874 4
Q ss_pred cccccc---CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCc----C---CC-CCCccEEEecc
Q 018172 118 ANTFDK---NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTP----I---TG-AADHDIMLFTL 185 (360)
Q Consensus 118 ~~~~~~---~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~----~---~~-~~~~~i~~~S~ 185 (360)
.+.++. +.++++|++++|+||||.+++ +.+.++|+++|+++|+||+|.++.+.. . .+ ..+.++++.|+
T Consensus 175 ~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~ 254 (409)
T 3kki_A 175 CDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASL 254 (409)
T ss_dssp HHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEES
T ss_pred HHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeec
Confidence 444433 235799999999999999998 778889999999999999998633211 0 11 23567999999
Q ss_pred ccccCCCCceEEEEeecCHHHHHHHHHHHhh--ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 018172 186 SKCTGHAGSRIGWALVKDTEVARKMTRFIEL--GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIR 263 (360)
Q Consensus 186 sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 263 (360)
||.++++| ||+++ ++++++.+...... .+.+.+...+.++.++++.+ ...++.+++++++++++.+.|+
T Consensus 255 sK~~~~~g---g~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~-----~~~~~~~~~~~~~~~~l~~~L~ 325 (409)
T 3kki_A 255 AKTFAYRA---GAIWC-NNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEII-----ESADNRRQHLDRMARKLRIGLS 325 (409)
T ss_dssp SSTTCSSC---EEEEE-SSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHH-----HHCHHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCCc---eEEEE-CHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHH-----hcCHHHHHHHHHHHHHHHHHHH
Confidence 99999664 99998 77777777654322 22335566666666666633 2236788899999999999999
Q ss_pred hcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCC--CCCeEEEEecC--ChHH
Q 018172 264 QSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGA--DAKYARVSMLS--REEI 336 (360)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~--~~~~~R~s~~~--~~e~ 336 (360)
+++ +.+. +.++++|+.+++. ..+.+.|.++||.+.|+..+.. ..+++||++.. ++|+
T Consensus 326 ~~g-~~~~---------------~~~~~~~~~~~~~~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~ 389 (409)
T 3kki_A 326 QLG-LTIR---------------SESQIIGLETGDERNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQ 389 (409)
T ss_dssp TTT-CCCC---------------CSSSEEEEEEESHHHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECCTTCCHHH
T ss_pred HcC-CccC---------------CCCCEEEEEeCCHHHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEccCCCCHHH
Confidence 883 3322 2334677777653 5577778888999988654322 35799999964 8999
Q ss_pred HHHHHHHHHHHHhc
Q 018172 337 FNIFLERLSAIQGG 350 (360)
Q Consensus 337 ~~~~~~~l~~~~~~ 350 (360)
+++++++|++++++
T Consensus 390 i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 390 IAKIIEVCSDAVNY 403 (409)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999875
No 122
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.96 E-value=1.5e-27 Score=222.54 Aligned_cols=286 Identities=10% Similarity=-0.001 Sum_probs=201.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH--HHHHHhCCeeeeecC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP--AETDYLRSGLYKWDG 116 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~--~~~~~~g~~~~~~~~ 116 (360)
.++++.++++++.. ...+.+++|+|++++++.++..++++||+ |+++.|.|.... ..+...|.+++.++.
T Consensus 55 ~~~~~~la~~~g~~----~~~~~i~~~~ggt~al~~~~~~~~~~gd~----vi~~~~~~~~~~~~~~~~~~g~~~~~v~~ 126 (376)
T 3f0h_A 55 LENEKFMLEYAKAP----EGSKAVFMTCSSTGSMEAVVMNCFTKKDK----VLVIDGGSFGHRFVQLCEIHEIPYVALKL 126 (376)
T ss_dssp HHHHHHHHHHHTCC----TTCEEEEESSCHHHHHHHHHHHHCCTTCC----EEEEESSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHhCCC----CCceEEEEcCChhHHHHHHHHhccCCCCe----EEEEeCChhhHHHHHHHHHcCCceEEEeC
Confidence 66777788887751 01134555999999999999999999998 999988766543 346667999988876
Q ss_pred Ccc------cccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccc
Q 018172 117 DAN------TFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSK 187 (360)
Q Consensus 117 ~~~------~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK 187 (360)
+.+ .++. +++++++++++|+||||.+++ +.+.++|+++|+++|+|++|..+.........+.++++.|+||
T Consensus 127 ~~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K 206 (376)
T 3f0h_A 127 EHGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQK 206 (376)
T ss_dssp CTTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTT
T ss_pred CCCCCCCHHHHHHhhccCceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCccccccccCccEEEecCcc
Confidence 532 2221 468999999999999999998 6788899999999999999986543322223456799999999
Q ss_pred ccC-CCCceEEEEeecCHHHHHHHHHHHh-----------------hccccCChHHHHHHHHHhcccCCCchhHHHHHHH
Q 018172 188 CTG-HAGSRIGWALVKDTEVARKMTRFIE-----------------LGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRR 249 (360)
Q Consensus 188 ~~~-~~G~r~G~~~~~~~~~~~~l~~~~~-----------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 249 (360)
.++ ++| +|++++ ++++++.+..... ....+.+...+.++.++++.+.+. ..+++.++
T Consensus 207 ~l~~~~G--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~--~~~~~~~~ 281 (376)
T 3f0h_A 207 VLACPPG--ISVIVL-APRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKH--GGADAEVA 281 (376)
T ss_dssp TTCCCSS--CEEEEE-CHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHT--THHHHHHH
T ss_pred cccCCCc--eEEEEE-CHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHh--cCHHHHHH
Confidence 998 666 677887 8888888764211 012234444445555555543221 25888999
Q ss_pred HHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCccccc-CCchHHHHHHHHhh-CeeeeCCCCCCCCCCeEE
Q 018172 250 LMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLE-SKEDEDCEKLLRAE-RIMARGGRRFGADAKYAR 327 (360)
Q Consensus 250 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~-gI~~~pg~~f~~~~~~~R 327 (360)
+++++++++.+.|++++ +.+..+.... ..+.+.. -.+.+.+.+.|.++ ||.++||.... ..+++|
T Consensus 282 ~~~~~~~~l~~~L~~~~-~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~-~~~~lR 348 (376)
T 3f0h_A 282 RIASQAADFRAKIKDLP-FELVSESPAN-----------GVTSVHPTTANAYDIFLKLKDEYGIWICPNGGEM-KDTIFR 348 (376)
T ss_dssp HHHHHHHHHHHHTTTSS-EEECCSSBBT-----------TEEEEEESSSCHHHHHHHHHHHSSEECEECCGGG-TTTCEE
T ss_pred HHHHHHHHHHHHHHHcC-CccCccccCc-----------eEEEEeCCCCCHHHHHHHHHHhCCEEEecCcccc-CCCEEE
Confidence 99999999999998874 3333222111 0111211 11236677777777 99999984322 367999
Q ss_pred EEecC--ChHHHHHHHHHHHHHHhc
Q 018172 328 VSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 328 ~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
+++.. ++|++++++++|++++++
T Consensus 349 is~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 349 VGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp EECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHh
Confidence 99853 899999999999999865
No 123
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.96 E-value=2e-28 Score=227.12 Aligned_cols=279 Identities=13% Similarity=0.057 Sum_probs=200.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCCh-HHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGS-TQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~-t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
+++|+.++++++. .++++|++|+|+ ++++..++..+..+|+. +..|+++.++|.. ...++..| +++.++.+
T Consensus 51 ~~l~~~la~~~g~-----~~~~~v~~~~g~gt~al~~~~~~l~~~~~~-g~~vi~~~~~~~~-~~~~~~~g-~~~~v~~~ 122 (360)
T 1w23_A 51 EQAQNLLRELLQI-----PNDYQILFLQGGASLQFTMLPMNLLTKGTI-GNYVLTGSWSEKA-LKEAKLLG-ETHIAAST 122 (360)
T ss_dssp HHHHHHHHHHHTC-----CTTEEEEEESSHHHHHHHHHHHHHCCTTCE-EEEEECSHHHHHH-HHHHHTTS-EEEEEEEC
T ss_pred HHHHHHHHHHhCC-----CCCceEEEECCcchHHHHHHHHHhcCCCCc-ccEEEecchhHHH-HHHHHHhC-CeEEeecc
Confidence 7889999998885 123589999999 99999999999866421 1227777777754 33466679 99888765
Q ss_pred c-------ccccc---CCCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccc
Q 018172 118 A-------NTFDK---NNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSK 187 (360)
Q Consensus 118 ~-------~~~~~---~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK 187 (360)
. +.+.. ++++++|++++|+||||.+++ ++++++|+++|+|++|..+..+...... +++++|+||
T Consensus 123 ~~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG~~~~----~i~~~~~~~li~D~a~~~~~~~~~~~~~--di~~~s~sK 196 (360)
T 1w23_A 123 KANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQ----NFPEINHAPLIADMSSDILSRPLKVNQF--GMIYAGAQK 196 (360)
T ss_dssp GGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTEECS----SCCCCCSSCEEEECTTTTTSSCCCGGGC--SEEEEETTT
T ss_pred cccCcCCccchHhhccCCCCCEEEEeCCCCCcceecc----cccccCCceEEEechhhcCCCCcCcccC--CEEEEEccc
Confidence 3 23322 467999999999999999988 3344699999999999865432111222 689999999
Q ss_pred ccCCCCceEEEEeecCHHHHHHHHHHH------------hhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHH
Q 018172 188 CTGHAGSRIGWALVKDTEVARKMTRFI------------ELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERW 255 (360)
Q Consensus 188 ~~~~~G~r~G~~~~~~~~~~~~l~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 255 (360)
.++++| +||+++ ++++++.+.... .....+.+...+.++.++++.+.+. ..+++.++++++++
T Consensus 197 ~~~~~G--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~--~~~~~~~~~~~~~~ 271 (360)
T 1w23_A 197 NLGPSG--VTVVIV-KKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDL--GGAEAIAKQNEEKA 271 (360)
T ss_dssp TTSCTT--CEEEEE-EHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHT--THHHHHHHHHHHHH
T ss_pred ccCCCC--cEEEEE-cHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHH
Confidence 999777 999998 677776654321 0112345666666676667643211 26889999999999
Q ss_pred HHHHHHHHhcCCc-ccC-CCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEe
Q 018172 256 NMLRQVIRQSGVF-GLP-EYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARVSM 330 (360)
Q Consensus 256 ~~l~~~l~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~ 330 (360)
+++.+.|++++++ ... .+.. ..+.++|+.+++. ..+.+.|.++||.++||..+ ++++|+|+
T Consensus 272 ~~l~~~L~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~---~~~iRis~ 337 (360)
T 1w23_A 272 KIIYDTIDESNGFYVGHAEKGS-----------RSLMNVTFNLRNEELNQQFLAKAKEQGFVGLNGHRS---VGGCRASI 337 (360)
T ss_dssp HHHHHHHHTTTTSSEESSCGGG-----------BCSSEEEEECSSHHHHHHHHHHHHHTTEESCBCCTT---TCSEEEEC
T ss_pred HHHHHHHHHccCcccccCCchh-----------ccCcEEEEEcCCCccHHHHHHHHHHCCeeeecCCCC---CCeEEEEe
Confidence 9999999988643 221 1110 1122688888753 45666788899999998754 56899999
Q ss_pred cC--ChHHHHHHHHHHHHHHhc
Q 018172 331 LS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 331 ~~--~~e~~~~~~~~l~~~~~~ 350 (360)
.. ++|++++++++|++++++
T Consensus 338 ~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 338 YNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHhh
Confidence 74 899999999999998754
No 124
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.96 E-value=1.3e-27 Score=225.21 Aligned_cols=289 Identities=13% Similarity=0.126 Sum_probs=201.8
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH----HHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE----TDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~----~~~~g~~~~~ 113 (360)
..+||++++++++. . ++|++++| ++++..++. ++++||+ |++++|+|...... ++..|++++.
T Consensus 69 ~~~l~~~la~~~g~------~-~~i~~~sG-~~ai~~~~~-l~~~gd~----Vl~~~~~y~~~~~~~~~~~~~~G~~v~~ 135 (403)
T 3cog_A 69 RNCLEKAVAALDGA------K-YCLAFASG-LAATVTITH-LLKAGDQ----IICMDDVYGGTNRYFRQVASEFGLKISF 135 (403)
T ss_dssp HHHHHHHHHHHHTC------S-EEEEESCH-HHHHHHHHT-TSCTTCE----EEEESSCCHHHHHHHHHTGGGGTCEEEE
T ss_pred HHHHHHHHHHHhCC------C-cEEEECCH-HHHHHHHHH-HhCCCCE----EEEeCCCcchHHHHHHHHHHHcCCEEEE
Confidence 37999999999985 3 56777776 589999998 8999998 99999999986554 3567999999
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcC-cEEEEeecccCCCC-CcCCCCCCccEEEecccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAE-GKLIHDLAYYWPQY-TPITGAADHDIMLFTLSK 187 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~-~~li~D~ay~~~~~-~~~~~~~~~~i~~~S~sK 187 (360)
++.+ .+.+.. ++++++|++++|+||||.+++ +.+.++|+++| +++|+|++|..+.+ .++ ..+.+++++|+||
T Consensus 136 v~~~d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~--~~~~div~~S~sK 213 (403)
T 3cog_A 136 VDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPL--ALGADISMYSATK 213 (403)
T ss_dssp ECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTT--TTTCSEEEEETTT
T ss_pred ECCCCHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCCcc--ccCCeEEEEcChh
Confidence 9874 334432 468999999999999999998 67888899899 99999999987532 222 2578999999999
Q ss_pred ccCCCC-ceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 018172 188 CTGHAG-SRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSG 266 (360)
Q Consensus 188 ~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 266 (360)
.++.+| .|+||++++++++++.+......++.+.+++.+.++...++. +....++..++.+.+.+.+++++
T Consensus 214 ~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~--------l~~r~~~~~~n~~~l~~~l~~~~ 285 (403)
T 3cog_A 214 YMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT--------LHVRMEKHFKNGMAVAQFLESNP 285 (403)
T ss_dssp TTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT--------HHHHHHHHHHHHHHHHHHHHTCT
T ss_pred hccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH--------HHHHHHHHHHHHHHHHHHHhcCC
Confidence 998666 479999985689999998777666667788888887776652 22233444556666667776653
Q ss_pred CcccCCCCCc----ccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeC---C----------CCC---------
Q 018172 267 VFGLPEYPLE----YCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARG---G----------RRF--------- 319 (360)
Q Consensus 267 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~p---g----------~~f--------- 319 (360)
.+...-.++- .+.+......+.++++.+.+++. +.+.+.+.+.||.++. | ..+
T Consensus 286 ~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~ 365 (403)
T 3cog_A 286 WVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDR 365 (403)
T ss_dssp TEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHH
T ss_pred CEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCCHHHHHHHHHhCCcceEccCCCCcceeeecccccccccCCHHHH
Confidence 2221111100 00000001113355666677654 6777888888886542 2 111
Q ss_pred ---CCCCCeEEEEecC--ChHHHHHHHHHHHHHHh
Q 018172 320 ---GADAKYARVSMLS--REEIFNIFLERLSAIQG 349 (360)
Q Consensus 320 ---~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~ 349 (360)
|..++++|+|++. ++++++.+.++|.+++.
T Consensus 366 ~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~~~~ 400 (403)
T 3cog_A 366 DVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAHP 400 (403)
T ss_dssp HHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHCC
T ss_pred HhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHHhhc
Confidence 3336799999977 45666666666665543
No 125
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.96 E-value=6.2e-28 Score=225.08 Aligned_cols=267 Identities=15% Similarity=0.077 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHh---hc---CCC-CCCCceEEEeCCCCCCcHHHHHHhCCe-
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYA---LS---SPG-GPEPISVVSAAPYYSQYPAETDYLRSG- 110 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~---l~---~~g-d~~~~~vl~~~p~~~~~~~~~~~~g~~- 110 (360)
.++|++++++++. + ++|++|+|+++++..++.. +. ++| |+ |++++|+|..+...+...+..
T Consensus 73 ~~l~~~la~~~g~------~-~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~----vl~~~~~y~~~~~~~~~~~~~~ 141 (375)
T 2eh6_A 73 EELAHKLVKHFWT------E-GKVFFANSGTESVEAAIKLARKYWRDKGKNKWK----FISFENSFHGRTYGSLSATGQP 141 (375)
T ss_dssp HHHHHHHHHTSSS------C-EEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCE----EEEEBTCCCCSSHHHHHHCBCG
T ss_pred HHHHHHHHhhcCC------C-CeEEEeCchHHHHHHHHHHHHHHhccCCCCCCE----EEEECCCcCCCchhhhhhcCCc
Confidence 8999999999864 4 6899999999999999875 34 677 77 999999999887766554322
Q ss_pred ------------eeeec-CCcccccc--CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCC
Q 018172 111 ------------LYKWD-GDANTFDK--NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYT 170 (360)
Q Consensus 111 ------------~~~~~-~~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~ 170 (360)
+..++ .|.+.++. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|.+....
T Consensus 142 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~ 221 (375)
T 2eh6_A 142 KFHKGFEPLVPGFSYAKLNDIDSVYKLLDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRT 221 (375)
T ss_dssp GGTTTTCSCCSSEEEECTTCHHHHHTTCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTT
T ss_pred cccCCCCCCCCCceeCCCchHHHHHHHhcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCC
Confidence 22332 23344433 357899999999999999954 45678888899999999999842211
Q ss_pred c--C-CCCCC--ccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHH
Q 018172 171 P--I-TGAAD--HDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFE 245 (360)
Q Consensus 171 ~--~-~~~~~--~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 245 (360)
. . ....+ .+++ ||||.++ +|+|+||+++ ++++++.+.......+++.+++.|.++.++++. ++
T Consensus 222 ~~~~~~~~~~~~~d~~--s~SK~~~-~g~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~ 289 (375)
T 2eh6_A 222 GEFYAYQHFNLKPDVI--ALAKGLG-GGVPIGAILA-REEVAQSFTPGSHGSTFGGNPLACRAGTVVVDE--------VE 289 (375)
T ss_dssp SSSSGGGGGTCCCSEE--EECGGGG-TTSCCEEEEE-EHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHH--------HH
T ss_pred CcchhhhhcCCCCCEE--EEccccc-CCCCeEEEEE-cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHH--------HH
Confidence 1 1 11112 2333 7889999 7999999999 678877776532334567788888888777762 12
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCCCCCCC
Q 018172 246 YGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRFGADAK 324 (360)
Q Consensus 246 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~~~~~ 324 (360)
+.+++++++++++.+.|++++... . .+.++|+|+++++. ..+.+.|.++||.+.|+. ++
T Consensus 290 ~~~~~~~~~~~~l~~~L~~~~~~~-~--------------~~~g~~~~~~~~~~~~~~~~~l~~~gi~~~~~~-----~~ 349 (375)
T 2eh6_A 290 KLLPHVREVGNYFKEKLKELGKGK-V--------------KGRGLMLGLELERECKDYVLKALEKGLLINCTA-----GK 349 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSE-E--------------EEETTEEEEECSSCCHHHHHHHHHTTEECEEET-----TT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC-c--------------eEEEEEEEEEEcCcHHHHHHHHHHCCCEEecCC-----CC
Confidence 778888999999999998875311 1 12345788888644 667777778999999852 67
Q ss_pred eEEEEec--CChHHHHHHHHHHHHHH
Q 018172 325 YARVSML--SREEIFNIFLERLSAIQ 348 (360)
Q Consensus 325 ~~R~s~~--~~~e~~~~~~~~l~~~~ 348 (360)
++|+++. .++|++++++++|++++
T Consensus 350 ~iRi~~~~~~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 350 VLRFLPPLIIQKEHIDRAISVLREIL 375 (375)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 9999975 38999999999998764
No 126
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.95 E-value=8.6e-27 Score=218.92 Aligned_cols=287 Identities=14% Similarity=0.073 Sum_probs=208.7
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH----HHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET----DYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~----~~~g~~~~~ 113 (360)
..+||++++++++. + ++++++|+++++..++..++++||+ |+++.|+|..+...+ +..|.+++.
T Consensus 68 ~~~l~~~la~~~g~-------~-~~~~~~sGt~A~~~al~~~~~~gd~----Vi~~~~~y~~~~~~~~~~~~~~g~~~~~ 135 (392)
T 3qhx_A 68 RTALEAALAAVEDA-------A-FGRAFSSGMAAADCALRAMLRPGDH----VVIPDDAYGGTFRLIDKVFTGWNVEYTP 135 (392)
T ss_dssp HHHHHHHHHHHTTC-------S-EEEEESSHHHHHHHHHHHHCCTTCE----EEEETTCCHHHHHHHHHTGGGGTCEEEE
T ss_pred HHHHHHHHHHHhCC-------C-cEEEECCHHHHHHHHHHHHhCCCCE----EEEeCCCcchHHHHHHHHHHhcCcEEEE
Confidence 37899999999984 3 6888888899999999999999998 999999999887766 667999999
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+ .+.+.. ++++++|++++|+||||.+.+ +.+.++|+++|+++|+|++|..+. .......+.++++.|+||.+
T Consensus 136 v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~-~~~~~~~~~di~~~S~sK~l 214 (392)
T 3qhx_A 136 VALADLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPA-LQQPLSLGADVVLHSTTKYI 214 (392)
T ss_dssp ECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTT-TCCGGGGTCSEEEEETTTTT
T ss_pred eCCCCHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccc-cCChHHhCCcEEEEcCcccc
Confidence 8864 334433 468999999999999999988 778889999999999999998542 11222456789999999999
Q ss_pred CCCC-ceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 190 GHAG-SRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 190 ~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+.+| .++||++++++++.+.+.......+.+.++..+.++...++. +....++..++.+.+.+.|.+++.+
T Consensus 215 g~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~--------l~~~~~~~~~~~~~l~~~L~~~~~v 286 (392)
T 3qhx_A 215 GGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT--------LVLRMQRHSENAAAVAEFLAEHPAI 286 (392)
T ss_dssp TCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT--------HHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred CCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH--------HHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9777 799999995589999998877767778888888877776652 3344556677778888888888654
Q ss_pred ccCCCCCcc----cccccccCCCCCCcccccCCch----HHHHHHHHhhCeeeeCCCCCC-------------------C
Q 018172 269 GLPEYPLEY----CNFTGKFTNSHPGFAWLESKED----EDCEKLLRAERIMARGGRRFG-------------------A 321 (360)
Q Consensus 269 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~gI~~~pg~~f~-------------------~ 321 (360)
....+++.. +........+.+.++++.++++ +.+.+.|+..++.+..|..+. .
T Consensus 287 ~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~ 366 (392)
T 3qhx_A 287 STVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLEV 366 (392)
T ss_dssp EEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCC
T ss_pred ceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHHcCC
Confidence 333222110 0000111134466788888762 445566666677777665431 2
Q ss_pred CCCeEEEEecCChHHHHHHHHHHHHH
Q 018172 322 DAKYARVSMLSREEIFNIFLERLSAI 347 (360)
Q Consensus 322 ~~~~~R~s~~~~~e~~~~~~~~l~~~ 347 (360)
.++.+|||++. |+.++.++.+.+.
T Consensus 367 ~~~~iRlSvg~--e~~~~~i~~l~~a 390 (392)
T 3qhx_A 367 PDDLVRLSVGI--EDVADLLDDLKQA 390 (392)
T ss_dssp CTTEEEEECCS--SCHHHHHHHHHHH
T ss_pred CCCeEEEEecc--CCHHHHHHHHHHH
Confidence 36789999966 2334444444444
No 127
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.95 E-value=1.1e-27 Score=221.97 Aligned_cols=280 Identities=11% Similarity=-0.012 Sum_probs=195.2
Q ss_pred ccccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCC--CCCceEEEeCCCCCCcHH
Q 018172 25 SYLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGG--PEPISVVSAAPYYSQYPA 102 (360)
Q Consensus 25 ~~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd--~~~~~vl~~~p~~~~~~~ 102 (360)
..|++..+. .+||++++++++. ++.+++ +|+++++..++..+.++|| . |+++.++|.....
T Consensus 41 ~~y~~~~~~-----~~l~~~la~~~~~-------~~~i~~-~~G~~a~~~al~~~~~~gd~~~----vi~~~~~~~~~~~ 103 (357)
T 3lws_A 41 DQYGTGAII-----EPFEQKFADVLGM-------DDAVFF-PSGTMAQQVALRIWSDETDNRT----VAYHPLCHLEIHE 103 (357)
T ss_dssp EETTEETTH-----HHHHHHHHHHHTC-------SEEEEE-SCHHHHHHHHHHHHHHHHTCCE----EEECTTCHHHHSS
T ss_pred ccccCChHH-----HHHHHHHHHHhCC-------CcEEEe-cCcHHHHHHHHHHHhhcCCCcE----EEecccceeeeec
Confidence 347655555 9999999999984 334444 6678899999999988887 4 7777766554333
Q ss_pred ---HHHHhCCeeeeecCCc-----cccccCCCeeEEEEcCCCCCC-cccch----HHHHHHhhhcCcEEEEeecccC---
Q 018172 103 ---ETDYLRSGLYKWDGDA-----NTFDKNNGAYIEVVNSPNNPD-GTIRE----AVLAKVNRSAEGKLIHDLAYYW--- 166 (360)
Q Consensus 103 ---~~~~~g~~~~~~~~~~-----~~~~~~~~~~~i~~~~p~NPt-G~~~~----~~~~~~~~~~~~~li~D~ay~~--- 166 (360)
.....|++++.++.+. +.+...++++++++++||||| |.+++ +.+.++|+++|+++|+|++|.+
T Consensus 104 ~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~ 183 (357)
T 3lws_A 104 QDGLKELHPIETILVGAADRLMTLDEIKALPDIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEML 183 (357)
T ss_dssp TTHHHHHSSCEEEECSCTTSCCCHHHHHTCCSCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHH
T ss_pred cchhhhccCcEEEEecCCCCCcCHHHHhcCcCcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhh
Confidence 3555699998887432 223222458999999999998 99886 3566788889999999999861
Q ss_pred ---C-CCCcCCCCCCccEEEecccccc-CCCCceEEEEeecCHHHHHHHHHHHhhccccC--ChHHHHHHHHHhcccCCC
Q 018172 167 ---P-QYTPITGAADHDIMLFTLSKCT-GHAGSRIGWALVKDTEVARKMTRFIELGSIGV--SKESQLRAAKILGIVSDD 239 (360)
Q Consensus 167 ---~-~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~ 239 (360)
+ ....+. ...++++.|+||.+ ++.| ||+++ ++++++.+.+.+.....+. ..+.+.++.+.++
T Consensus 184 ~~~~~~~~~~~--~~~d~~~~s~sK~~~~~~g---g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----- 252 (357)
T 3lws_A 184 PYYEKTAAEIA--GLFDSIYISFYKGLGGIAG---AILAG-PAAFCQTARIWKRRYGGDLISLYPYIVSADYYYE----- 252 (357)
T ss_dssp HHHTCCHHHHH--TTSSEEEEESSSTTCCSSC---EEEEE-CHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHH-----
T ss_pred hhcCCChHHHH--hcCCEEEEeccccCCCCce---EEEEc-CHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHH-----
Confidence 1 111111 22345689999999 5444 99988 8999999987665433332 2333334334444
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCccc-CCCCCcccccccccCCCCCCcccccCCc-----hHHHHHHHHhhCeee
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSGVFGL-PEYPLEYCNFTGKFTNSHPGFAWLESKE-----DEDCEKLLRAERIMA 313 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~gI~~ 313 (360)
.+.+++ +++.++++++.+.|++++++.+ ..+. .++|+|+++++ .+.+.+.|.++||.+
T Consensus 253 --~~~~~~-~~~~~~~~~l~~~L~~~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v 316 (357)
T 3lws_A 253 --LRKDRM-GQYYEQAKQLAEQFNALPGVHTTPEVP-------------VSNMFHLHFDGQAADISPKLEQVQEETGLGF 316 (357)
T ss_dssp --HHTTCH-HHHHHHHHHHHHHHHTSTTEEEESSSC-------------SSSEEEEEEESCHHHHHHHHHHHHHHHCEES
T ss_pred --HHHHHH-HHHHHHHHHHHHHHHhCCCCeeccCCC-------------cceEEEEEecCChHHHHHHHHHHHHhcCeEE
Confidence 223333 3357778899999999877665 3333 33478888764 256788899999999
Q ss_pred eCCCCCCCCCCeEEEEec-----CChHHHHHHHHHHHHHH
Q 018172 314 RGGRRFGADAKYARVSML-----SREEIFNIFLERLSAIQ 348 (360)
Q Consensus 314 ~pg~~f~~~~~~~R~s~~-----~~~e~~~~~~~~l~~~~ 348 (360)
+||..|..+..++|+++. .++|++++++++|.+.+
T Consensus 317 ~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 317 VGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp CSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred ecccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 999766643458999975 27799999999998765
No 128
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.95 E-value=2.8e-27 Score=218.27 Aligned_cols=277 Identities=11% Similarity=0.053 Sum_probs=191.3
Q ss_pred cccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH---
Q 018172 26 YLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA--- 102 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~--- 102 (360)
.|.+..+. ++||++++++++. + ++++++|+++++.+++..++++||+ |+++.|+|.....
T Consensus 33 ~y~~~~~~-----~~l~~~la~~~g~-------~-~~~~~~~gt~a~~~~~~~~~~~gd~----Vl~~~~~~~~~~~~~~ 95 (347)
T 1jg8_A 33 VYGEDPTI-----NELERLAAETFGK-------E-AALFVPSGTMGNQVSIMAHTQRGDE----VILEADSHIFWYEVGA 95 (347)
T ss_dssp GGTCCHHH-----HHHHHHHHHHHTC-------S-EEEEESCHHHHHHHHHHHHCCTTCE----EEEETTCHHHHSSTTH
T ss_pred ccCCChHH-----HHHHHHHHHHhCC-------c-eEEEecCcHHHHHHHHHHhcCCCCE----EEEcCcchhhhccccc
Confidence 46655665 9999999999984 2 5778888899999999999999998 9999999975432
Q ss_pred HHHHhCCeeeeecCC------cccccc--C------CCeeEEEEcCCCCCC-cccch----HHHHHHhhhcCcEEEEeec
Q 018172 103 ETDYLRSGLYKWDGD------ANTFDK--N------NGAYIEVVNSPNNPD-GTIRE----AVLAKVNRSAEGKLIHDLA 163 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~------~~~~~~--~------~~~~~i~~~~p~NPt-G~~~~----~~~~~~~~~~~~~li~D~a 163 (360)
.+...|++++.+ .+ .+.+.. + +++++|++++||||| |.+++ +.+.++|+++|+++|+|++
T Consensus 96 ~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a 174 (347)
T 1jg8_A 96 MAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGA 174 (347)
T ss_dssp HHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEET
T ss_pred hhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehh
Confidence 567789998887 32 222211 2 268999999999999 99987 3556788889999999998
Q ss_pred ccCC-----CCCcCCCCCCccEEEeccccccCCCCceEE-EEeecCHHHHHHHHHHHhhcccc--CChHHHHHHHHHhcc
Q 018172 164 YYWP-----QYTPITGAADHDIMLFTLSKCTGHAGSRIG-WALVKDTEVARKMTRFIELGSIG--VSKESQLRAAKILGI 235 (360)
Q Consensus 164 y~~~-----~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G-~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~l~~ 235 (360)
|..+ ......-....+.++.|+||.++.+ +| |+++ ++++++.+...+...+.+ .+...+.++...++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~---~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 250 (347)
T 1jg8_A 175 RIFNASIASGVPVKEYAGYADSVMFCLSKGLCAP---VGSVVVG-DRDFIERARKARKMLGGGMRQAGVLAAAGIIALTK 250 (347)
T ss_dssp THHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCS---SCEEEEE-CHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHH
T ss_pred hhhcchhhcCCChHHhcccccEEEEecccccCCC---ceEEEEc-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHH
Confidence 6421 1111100012335567899998843 56 4555 888988887665443333 344555555555653
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHHhhCe
Q 018172 236 VSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLRAERI 311 (360)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gI 311 (360)
.. ..++ +. .++++.+.+.|+++ ++.+..+ ++.++|+|+++++ ...+.+.|.++||
T Consensus 251 ~~----~~~~---~~-~~~~~~l~~~L~~~-~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 309 (347)
T 1jg8_A 251 MV----DRLK---ED-HENARFLALKLKEI-GYSVNPE------------DVKTNMVILRTDNLKVNAHGFIEALRNSGV 309 (347)
T ss_dssp SS----TTHH---HH-HHHHHHHHHHHHHH-TCBCCGG------------GCCSSEEEEECTTSSSCHHHHHHHHHHHTE
T ss_pred HH----HHHH---HH-HHHHHHHHHHHHhc-CceeccC------------CCcceEEEEEcccccCCHHHHHHHHHHCCC
Confidence 21 2222 22 34667888888877 4443111 1234478888763 3667777788999
Q ss_pred eeeCCCCCCCCCCeEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 312 MARGGRRFGADAKYARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 312 ~~~pg~~f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
.++++. .+++|+++.. ++|++++++++|++++++
T Consensus 310 ~v~~~~-----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 310 LANAVS-----DTEIRLVTHKDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp ECEEEE-----TTEEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEecCC-----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 999852 4689999844 899999999999998754
No 129
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.95 E-value=4.5e-27 Score=222.03 Aligned_cols=286 Identities=13% Similarity=0.112 Sum_probs=203.8
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHH----hCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDY----LRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~----~g~~~~~ 113 (360)
..+|++.++++++. +++++++|+++++..++..++++||+ |+++.|+|..+...+.. .|.+++.
T Consensus 83 ~~~l~~~la~~~g~--------~~~~~~~sG~~Ai~~al~~l~~~Gd~----Vi~~~~~y~~~~~~~~~~~~~~g~~~~~ 150 (414)
T 3ndn_A 83 VSVFEERLRLIEGA--------PAAFATASGMAAVFTSLGALLGAGDR----LVAARSLFGSCFVVCSEILPRWGVQTVF 150 (414)
T ss_dssp HHHHHHHHHHHHTC--------SEEEEESSHHHHHHHHHHTTCCTTCE----EEEESCCCHHHHHHHHTHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCC--------CcEEEECCHHHHHHHHHHHHhCCCCE----EEEcCCccchHHHHHHHHHHHcCcEEEE
Confidence 37888888888873 36888888899999999999999998 99999999998877654 8999999
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC-CCcCCCCCCccEEEeccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ-YTPITGAADHDIMLFTLSKC 188 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~-~~~~~~~~~~~i~~~S~sK~ 188 (360)
++.+ .+.+.. ++++++|++++|+||||.+.+ +.+.++|+++|+++|+|++|..+. ..++ ..+.++++.|+||.
T Consensus 151 v~~~d~~~l~~ai~~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~--~~g~div~~S~sK~ 228 (414)
T 3ndn_A 151 VDGDDLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGF--PLGVDVVVYSGTKH 228 (414)
T ss_dssp ECTTCHHHHHHHTSSCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCG--GGTCSEEEEETTTT
T ss_pred eCCCCHHHHHHhcCCCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCch--hcCCCeEeccCCcc
Confidence 9874 344433 567999999999999999988 678889999999999999998431 1122 44568999999999
Q ss_pred cCCCC-ceEEEEeecCHHHHH-HHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 018172 189 TGHAG-SRIGWALVKDTEVAR-KMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSG 266 (360)
Q Consensus 189 ~~~~G-~r~G~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 266 (360)
++.+| +++|++++ +++.+. .+.......+.+.++....++...+ +.+....++..++++.+.+.|++++
T Consensus 229 l~~~G~~~~G~vv~-~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l--------~~l~~r~~~~~~~a~~l~~~L~~~p 299 (414)
T 3ndn_A 229 IDGQGRVLGGAILG-DREYIDGPVQKLMRHTGPAMSAFNAWVLLKGL--------ETLAIRVQHSNASAQRIAEFLNGHP 299 (414)
T ss_dssp TTCSSCCCCEEEEE-CHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHG--------GGHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred ccCCCCceEEEEEE-CHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99778 89999998 676665 6665554445555655554444433 3345556666788889999999887
Q ss_pred CcccCCCCCcc----cccccccCCCCCCcccccCCc-----h---HHHHHHHHhhCeeeeCCCCC---------------
Q 018172 267 VFGLPEYPLEY----CNFTGKFTNSHPGFAWLESKE-----D---EDCEKLLRAERIMARGGRRF--------------- 319 (360)
Q Consensus 267 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~l~~~gI~~~pg~~f--------------- 319 (360)
.+....+++.. +........+.+.++++.+++ . ..+.+.|+..++.+.+|..+
T Consensus 300 ~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~ 379 (414)
T 3ndn_A 300 SVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMG 379 (414)
T ss_dssp TEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTH
T ss_pred CEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCCCCCCCceeeCccccccccCC
Confidence 55433222210 000111123456788998864 3 44556666667777777543
Q ss_pred -------CCCCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 320 -------GADAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 320 -------~~~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
|..++++|||++. |+.+.+++.|.+.+
T Consensus 380 ~~~~~~~g~~~~~iRlsvG~--e~~~dli~dl~~al 413 (414)
T 3ndn_A 380 PEGRAAIGLGDGVVRISVGL--EDTDDLIADIDRAL 413 (414)
T ss_dssp HHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence 3346799999965 33455566665554
No 130
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.95 E-value=2.5e-26 Score=217.20 Aligned_cols=288 Identities=19% Similarity=0.157 Sum_probs=204.2
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH----HHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET----DYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~----~~~g~~~~~ 113 (360)
.+++|+.++++++. + ++++|+|++++++.++..++++||+ |+++.|+|......+ +..|.+++.
T Consensus 58 ~~~l~~~la~~~g~-------~-~~~~~~~gt~a~~~al~~l~~~gd~----vi~~~~~~~~~~~~~~~~~~~~g~~~~~ 125 (412)
T 2cb1_A 58 AKALEERLKALEGA-------L-EAVVLASGQAATFAALLALLRPGDE----VVAAKGLFGQTIGLFGQVLSLMGVTVRY 125 (412)
T ss_dssp HHHHHHHHHHHHTC-------S-EEEEESSHHHHHHHHHHTTCCTTCE----EEEETTCCHHHHHHHHHTTTTTTCEEEE
T ss_pred HHHHHHHHHHHhCC-------C-cEEEECCHHHHHHHHHHHHhCCCCE----EEEeCCCchhHHHHHHHHHHHcCCEEEE
Confidence 48999999999984 3 7999999999999999999999998 999999998766653 457999999
Q ss_pred ecCCcccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccccccC
Q 018172 114 WDGDANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCTG 190 (360)
Q Consensus 114 ~~~~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~~ 190 (360)
++.+.+.++. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+.........+.++++.|+||.++
T Consensus 126 ~~~~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~~ 205 (412)
T 2cb1_A 126 VDPEPEAVREALSAKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTKWAS 205 (412)
T ss_dssp ECSSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTTT
T ss_pred ECCCHHHHHHHhccCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCccccc
Confidence 9887655543 568999999999999999998 7788889999999999999986522222223568999999999998
Q ss_pred CCCceEEEEeecC-H--------------------------HHHHHHHHHH-hhccccCChHHHHHHHHHhcccCCCchh
Q 018172 191 HAGSRIGWALVKD-T--------------------------EVARKMTRFI-ELGSIGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 191 ~~G~r~G~~~~~~-~--------------------------~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
.+|.|+|++++.+ . ++.+.++... ...+...++.....+...++
T Consensus 206 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~-------- 277 (412)
T 2cb1_A 206 GHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLE-------- 277 (412)
T ss_dssp CSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGG--------
T ss_pred CCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCc--------
Confidence 8999999988744 2 4455555443 21223344444444443333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcc----cccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCC-
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEY----CNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGR- 317 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~- 317 (360)
.++...++..++.+++.+.|.+++++.....++.. +........+.+.++.+.+.+.+.+.+.|.+.||.+ .++
T Consensus 278 ~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~~~~~~~~~~l~~~~i~~-~~s~ 356 (412)
T 2cb1_A 278 TVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDLGDLERASRFLGAIRLLK-AANL 356 (412)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEECSSHHHHHHHHHHCSSEE-CSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCHHHHHHHHHhCCeee-eccc
Confidence 23444555667888899999988766633222110 000000001234466666633377888898899998 764
Q ss_pred --------CC----------------CCCCCeEEEEecC--ChHHHHHHHHHHHH
Q 018172 318 --------RF----------------GADAKYARVSMLS--REEIFNIFLERLSA 346 (360)
Q Consensus 318 --------~f----------------~~~~~~~R~s~~~--~~e~~~~~~~~l~~ 346 (360)
.+ |..++.+|+|++. ++++++.+.++|++
T Consensus 357 g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 357 GDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp SCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred CCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 11 1126799999977 67888888887764
No 131
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.95 E-value=1.3e-26 Score=220.31 Aligned_cols=287 Identities=14% Similarity=0.101 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH----HHHhCCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE----TDYLRSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~----~~~~g~~~~~~ 114 (360)
.++|++++++++. ++.|++++|+ +++..++..++++||+ |+++.|+|.++... ++..|++++.+
T Consensus 117 ~~l~~~lA~l~g~-------~~~v~~~sG~-~Ai~~al~~l~~~Gd~----Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v 184 (445)
T 1qgn_A 117 VVLEEKISALEGA-------ESTLLMASGM-CASTVMLLALVPAGGH----IVTTTDCYRKTRIFIETILPKMGITATVI 184 (445)
T ss_dssp HHHHHHHHHHHTC-------SEEEEESCHH-HHHHHHHHHHSCSSCE----EEEETTSCHHHHHHHHHTGGGGTCEEEEE
T ss_pred HHHHHHHHHHhCC-------CcEEEeCCHH-HHHHHHHHHHhCCCCE----EEEcCCCchhHHHHHHHHHHHcCCEEEEe
Confidence 6999999999984 3466666665 9999999999999998 99999999987764 55679999998
Q ss_pred cCC-cccccc--CCCe-eEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 115 DGD-ANTFDK--NNGA-YIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 115 ~~~-~~~~~~--~~~~-~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
+.+ .+.+.. ++++ ++|++++|+||||.+.+ +.+.++|+++|+++|+|++|..+... .+...+.+++++|+||.+
T Consensus 185 ~~~d~~~l~~ai~~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~-~~~~~g~Div~~S~sK~~ 263 (445)
T 1qgn_A 185 DPADVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQ-KALALGADLVLHSATKFL 263 (445)
T ss_dssp CSSCHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-CTTTTTCSEEEECTTTTT
T ss_pred CCCCHHHHHHHhccCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC-CccccCCEEEEECCcccc
Confidence 764 334432 3568 99999999999999998 77888899999999999999864322 223456789999999999
Q ss_pred CCCC-ceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018172 190 GHAG-SRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVF 268 (360)
Q Consensus 190 ~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 268 (360)
+..| .++||+++ ++++++.+.......+.+.++....++...++ .+....++..++.+.+.+.|.+++.+
T Consensus 264 gg~gd~~~G~l~~-~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~--------~l~~r~~~~~~~a~~l~~~L~~~p~v 334 (445)
T 1qgn_A 264 GGHNDVLAGCISG-PLKLVSEIRNLHHILGGALNPNAAYLIIRGMK--------TLHLRVQQQNSTALRMAEILEAHPKV 334 (445)
T ss_dssp TCSSSCCCEEEEE-CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGG--------GHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred cccccceEEEEEE-CHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHH--------HHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 8554 47999998 88999988776654444456665555544443 23344455666788899999988765
Q ss_pred c-cCCCCC-c--ccccccccCCCCCCcccccCCch-HHHHHHHHh---hCeeeeCCCCC---------------------
Q 018172 269 G-LPEYPL-E--YCNFTGKFTNSHPGFAWLESKED-EDCEKLLRA---ERIMARGGRRF--------------------- 319 (360)
Q Consensus 269 ~-~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~---~gI~~~pg~~f--------------------- 319 (360)
. +..|.. . .+........+.++++++.+++. +...+.+.+ .++.+..|..+
T Consensus 335 ~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~ 414 (445)
T 1qgn_A 335 RHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAK 414 (445)
T ss_dssp EEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHT
T ss_pred eEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHh
Confidence 2 222210 0 00000001123566788888753 334444433 36777776543
Q ss_pred -CCCCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 320 -GADAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 320 -~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
|..++.+|||++ .|+++.+++.|+++++
T Consensus 415 ~g~~~~~iRlSvG--~Edid~li~~L~~al~ 443 (445)
T 1qgn_A 415 YGIMDNLVRFSFG--VEDFDDLKADILQALD 443 (445)
T ss_dssp TTCCSSEEEEECC--SSCHHHHHHHHHHHHH
T ss_pred cCCCCCeEEEEec--cCCHHHHHHHHHHHHh
Confidence 334579999996 4578999999998875
No 132
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.95 E-value=1.1e-26 Score=217.93 Aligned_cols=288 Identities=14% Similarity=0.139 Sum_probs=205.4
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH----HHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE----TDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~----~~~~g~~~~~ 113 (360)
..+||++++++++. + +.++++++++++..++..++++||+ |+++.|+|..+... ++..|.+++.
T Consensus 61 ~~~l~~~la~~~g~-------~-~~i~~~sG~~ai~~~~~~~~~~gd~----vl~~~~~y~~~~~~~~~~~~~~g~~~~~ 128 (389)
T 3acz_A 61 VEQFEEMVCSIEGA-------A-GSAAFGSGMGAISSSTLAFLQKGDH----LIAGDTLYGCTVSLFTHWLPRFGIEVDL 128 (389)
T ss_dssp HHHHHHHHHHHHTC-------S-EEEEESSHHHHHHHHHTTTCCTTCE----EEEESSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhCC-------C-eEEEeCCHHHHHHHHHHHHhCCCCE----EEEeCCCchHHHHHHHHHHHHcCCEEEE
Confidence 37999999999984 3 4566666789999999999999998 99999999987766 5778999999
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC-CcCCCCCCccEEEeccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY-TPITGAADHDIMLFTLSKC 188 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~-~~~~~~~~~~i~~~S~sK~ 188 (360)
++.+ .+.+.. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+.. .++ ..+.++++.|+||.
T Consensus 129 v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~--~~~~di~~~S~sK~ 206 (389)
T 3acz_A 129 IDTSDVEKVKAAWKPNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLKPL--ELGADIALHSVSKY 206 (389)
T ss_dssp ECTTCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGG--GTTCSEEEEETTTT
T ss_pred ECCCCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccCcc--ccCCeEEEECChhh
Confidence 8753 344433 467899999999999999998 7788889989999999999986432 222 25689999999999
Q ss_pred cCCCCceE-EEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018172 189 TGHAGSRI-GWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGV 267 (360)
Q Consensus 189 ~~~~G~r~-G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 267 (360)
++.+|.|+ ||++++++++++.+.......+.+.++..+.++...++. +....++..++.+.+.+.|++++.
T Consensus 207 ~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~--------l~~r~~~~~~~~~~l~~~l~~~~~ 278 (389)
T 3acz_A 207 INGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKT--------LPIRMQIHMENGLKVAKFLEQHEK 278 (389)
T ss_dssp TTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT--------HHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH--------HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99899998 999994338999888776545566677777766666652 223334555667777777777643
Q ss_pred cccCCCCCc----ccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeC---C------CCC---------------
Q 018172 268 FGLPEYPLE----YCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARG---G------RRF--------------- 319 (360)
Q Consensus 268 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~p---g------~~f--------------- 319 (360)
+.....++- .+.+......+.++++.+.+++.+.+.+.|.+.||.+++ | ..+
T Consensus 279 v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~ 358 (389)
T 3acz_A 279 IVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKSFEAAKKLMEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRK 358 (389)
T ss_dssp EEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSHHHHHHHHTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHH
T ss_pred eeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECCHHHHHHHHHhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHh
Confidence 222111110 000000011234567777776556778888888998877 3 111
Q ss_pred -CCCCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 320 -GADAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 320 -~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
|..++++|+|++.. +.+++++.|.+.++
T Consensus 359 ~g~~~~~iRlsvg~~--~~~~li~~l~~al~ 387 (389)
T 3acz_A 359 QGITPELVRISVGIE--NVDDIIADLKQALE 387 (389)
T ss_dssp HTCCTTEEEEECCSS--CHHHHHHHHHHHHT
T ss_pred cCCCcCeEEEEeccC--CHHHHHHHHHHHHh
Confidence 22357999999653 55667777777664
No 133
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.95 E-value=1.1e-26 Score=218.60 Aligned_cols=287 Identities=15% Similarity=0.175 Sum_probs=203.6
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH----HHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET----DYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~----~~~g~~~~~ 113 (360)
..++|+.++++++. ++ .++++++++++..++..++++||+ |+++.|+|..+...+ ...|.+++.
T Consensus 67 ~~~l~~~la~~~g~-------~~-~i~~~sG~~a~~~~l~~~~~~gd~----vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 134 (398)
T 1gc0_A 67 LNLLEARMASLEGG-------EA-GLALASGMGAITSTLWTLLRPGDE----VLLGNTLYGCTFAFLHHGIGEFGVKLRH 134 (398)
T ss_dssp HHHHHHHHHHHHTC-------SE-EEEESSHHHHHHHHHHHHCCTTCE----EEEESSCCSHHHHHHHHTGGGGTCEEEE
T ss_pred HHHHHHHHHHHhCC-------Cc-EEEECCHHHHHHHHHHHHhcCCCE----EEEeCCCchhHHHHHHHHHHHcCCEEEE
Confidence 48999999999984 33 444555579999999999999998 999999999988776 667999998
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC-CcCCCCCCccEEEeccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY-TPITGAADHDIMLFTLSKC 188 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~-~~~~~~~~~~i~~~S~sK~ 188 (360)
++.+ .+.+.. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+.. .++ ..+.++++.|+||.
T Consensus 135 ~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~--~~~~d~~~~S~sK~ 212 (398)
T 1gc0_A 135 VDMADLQALEAAMTPATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPL--ELGADLVVHSATKY 212 (398)
T ss_dssp ECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGG--GGTCSEEEEETTTT
T ss_pred ECCCCHHHHHHhcCCCCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCCch--hhCceEEEECCccc
Confidence 8753 333332 468999999999999999998 7788889999999999999985321 122 34678999999999
Q ss_pred cCCCCceE-EEEeecCHHHHH-HHHHHHhh-ccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhc
Q 018172 189 TGHAGSRI-GWALVKDTEVAR-KMTRFIEL-GSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQS 265 (360)
Q Consensus 189 ~~~~G~r~-G~~~~~~~~~~~-~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 265 (360)
++.+|.|+ ||+++ +++.++ .+...... .+.+.+++.+.++.+.++. +....+...++.+.+.+.|+++
T Consensus 213 ~~~~~~~~~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~l~~~L~~~ 283 (398)
T 1gc0_A 213 LSGHGDITAGIVVG-SQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT--------LNLRMDRHCANAQVLAEFLARQ 283 (398)
T ss_dssp TTCSSSCCCEEEEE-CHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT--------HHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCCeEEEEEE-ChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccch--------HHHHHHHHHHHHHHHHHHHhcC
Confidence 99999998 99988 666655 56555544 4566788888777666652 3445556677777788888776
Q ss_pred CCcccCCCCCc----ccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeC---CCC-------------------
Q 018172 266 GVFGLPEYPLE----YCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARG---GRR------------------- 318 (360)
Q Consensus 266 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~p---g~~------------------- 318 (360)
+.+.....++. .+........+.++++.+.+++. +.+.+.+.+.+|.++. |..
T Consensus 284 ~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~ 363 (398)
T 1gc0_A 284 PQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEE 363 (398)
T ss_dssp TTEEEEEEC----------------CCTTEEEEEETTHHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHH
T ss_pred CCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCCHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHH
Confidence 53321111000 00000001124566777788755 6788888888988766 321
Q ss_pred ---CCCCCCeEEEEecC--ChHHHHHHHHHHHHH
Q 018172 319 ---FGADAKYARVSMLS--REEIFNIFLERLSAI 347 (360)
Q Consensus 319 ---f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~ 347 (360)
.|..++++|+|++. ++++++.+.++|+++
T Consensus 364 ~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 364 RAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp HHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 12235899999977 577888888877764
No 134
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.95 E-value=3.6e-26 Score=215.18 Aligned_cols=285 Identities=13% Similarity=0.066 Sum_probs=206.3
Q ss_pred cccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 26 YLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
.|.+..+. .++|++++++++. + ++++++|+++++..++..+ +++||+ |+++.|+|..+...+
T Consensus 58 ~y~~~~~~-----~~l~~~la~~~~~-------~-~~v~~~~Gt~a~~~~l~~~~~~~gd~----vl~~~~~~~~~~~~~ 120 (399)
T 2oga_A 58 RYLLGPEL-----EGFEAEFAAYCET-------D-HAVGVNSGMDALQLALRGLGIGPGDE----VIVPSHTYIASWLAV 120 (399)
T ss_dssp CCSSSHHH-----HHHHHHHHHHTTS-------S-EEEEESCHHHHHHHHHHHTTCCTTCE----EEEESSSCTHHHHHH
T ss_pred CCCCchhH-----HHHHHHHHHHHCC-------C-eEEEecCHHHHHHHHHHHhCCCCcCE----EEECCCccHHHHHHH
Confidence 46555555 9999999999985 2 5777777899999999999 889998 999999999999999
Q ss_pred HHhCCeeeeecCCccc--ccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCC
Q 018172 105 DYLRSGLYKWDGDANT--FDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITG 174 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~~--~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~ 174 (360)
+..|++++.++.+.+. ++. ++++++|+ |+||||...+ +.+.++|+++|+++|+|++|..+.......
T Consensus 121 ~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~ 197 (399)
T 2oga_A 121 SATGATPVPVEPHEDHPTLDPLLVEKAITPRTRALL---PVHLYGHPADMDALRELADRHGLHIVEDAAQAHGARYRGRR 197 (399)
T ss_dssp HHTTCEEEEECBCSSSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTEE
T ss_pred HHCCCEEEEEecCCCCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccCHHHHHHHHHHcCCEEEEECcccccCccCCee
Confidence 9999999999876532 221 35788877 6789999987 778888998999999999998643211110
Q ss_pred -CCCccEEEecc--ccccCCCCceEEEEeecCHHHHHHHHHHHhhc------------cccCChHHHHHHHHHhcccCCC
Q 018172 175 -AADHDIMLFTL--SKCTGHAGSRIGWALVKDTEVARKMTRFIELG------------SIGVSKESQLRAAKILGIVSDD 239 (360)
Q Consensus 175 -~~~~~i~~~S~--sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~------------~~~~~~~~~~~~~~~l~~~~~~ 239 (360)
..-.++++.|+ ||.++.+| |+||++++++++++.+....... ....+.+.+.++.+.++
T Consensus 198 ~~~~~di~~~S~~~sK~~~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~----- 271 (399)
T 2oga_A 198 IGAGSSVAAFSFYPGKNLGCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLA----- 271 (399)
T ss_dssp TTCTTCEEEEECCTTSSSCCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHH-----
T ss_pred cccccCEEEEeCCCCccCCcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHH-----
Confidence 11137899999 79999779 99999985589998887765431 12345666655555554
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCCcccccccccCCCCCCccc--ccC--CchHHHHHHHHhhCeeee
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPE-YPLEYCNFTGKFTNSHPGFAW--LES--KEDEDCEKLLRAERIMAR 314 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~l~~~gI~~~ 314 (360)
.+++..++.+++.+++.+.|++++++.+.. +.++ +++| +.+ .+...+.+.|.++||.++
T Consensus 272 ---~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~~L~~~gI~v~ 335 (399)
T 2oga_A 272 ---HLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDT-------------DPVWHLFTVRTERRDELRSHLDARGIDTL 335 (399)
T ss_dssp ---THHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTE-------------ECCCSSEEEECSSHHHHHHHHHHTTBCCB
T ss_pred ---HHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCC-------------cceeEEEEEECCCHHHHHHHHHHCCCcee
Confidence 233455566677788888888876655432 2222 1333 222 234778888889999998
Q ss_pred CCCCC-----------CCC-----------CCeEEEEecC--ChHHHHHHHHHHHHHHhchh
Q 018172 315 GGRRF-----------GAD-----------AKYARVSMLS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 315 pg~~f-----------~~~-----------~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
++... +.. .+++||++.. ++|++++++++|++++++.+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l~ 397 (399)
T 2oga_A 336 THYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAERVD 397 (399)
T ss_dssp CSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSCC
T ss_pred cCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 85421 100 2579999864 89999999999999987643
No 135
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.95 E-value=6.5e-27 Score=216.34 Aligned_cols=276 Identities=13% Similarity=0.115 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH--HHHh--CCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE--TDYL--RSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~--~~~~--g~~~~~~ 114 (360)
.++++.++++++ ++++|++|+|+++++..++..+.++||. |+++.|+|...... +... |.+++.+
T Consensus 46 ~~l~~~la~~~g-------~~~~v~~~~~gt~a~~~al~~~~~~gd~----vi~~~~~~~~~~~~~~~~~~~~g~~~~~v 114 (356)
T 1v72_A 46 AQVKRKFCEIFE-------RDVEVFLVPTGTAANALCLSAMTPPWGN----IYCHPASHINNDECGAPEFFSNGAKLMTV 114 (356)
T ss_dssp HHHHHHHHHHHT-------SCCEEEEESCHHHHHHHHHHTSCCTTEE----EEECTTSHHHHSSTTHHHHHTTSCEEEEC
T ss_pred HHHHHHHHHHhC-------CCCcEEEeCCccHHHHHHHHHhcCCCCE----EEEcCccchhhhhchHHHHHhCCcEEEEe
Confidence 788888888876 2346999999999999999999999998 99999999877666 7777 9999988
Q ss_pred cCC-----cccccc---CC-------CeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCC-----CCC
Q 018172 115 DGD-----ANTFDK---NN-------GAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWP-----QYT 170 (360)
Q Consensus 115 ~~~-----~~~~~~---~~-------~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~-----~~~ 170 (360)
+.+ .+.++. ++ ++++|++++||| ||.+++ +.+.++|+++|+++|+|++|... ...
T Consensus 115 ~~~~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~ 193 (356)
T 1v72_A 115 DGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCS 193 (356)
T ss_dssp CCGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCC
T ss_pred cCCCCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCC
Confidence 764 222222 22 689999999987 999887 35667888899999999998631 111
Q ss_pred -cCCC-CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHH
Q 018172 171 -PITG-AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGR 248 (360)
Q Consensus 171 -~~~~-~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 248 (360)
.... ..+.++++.|+||. +. ....||+++ ++++++.+.......+. .+...+.++.+.++.+.+ ....+..
T Consensus 194 ~~~~~~~~~~d~~~~s~sK~-g~-~~G~g~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~---~~~~~~~ 266 (356)
T 1v72_A 194 PAEMTWKAGVDALSFGATKN-GV-LAAEAIVLF-NTSLATEMSYRRKRAGH-LSSKMRFLSAQIDAYLTD---DLWLRNA 266 (356)
T ss_dssp TTTTTGGGTCCEEEECCGGG-TC-SSCEEEEES-SGGGHHHHHHHHHHTTC-CCSSTHHHHHHHHHHTST---THHHHHH
T ss_pred HHHhhhhhcCCEEEEecccC-CC-cCccEEEEE-CHHHHhhHHHHhhccCc-hhhhHHHHHHHHHHHHHh---hhHHHHH
Confidence 1111 12345667799997 42 233448887 78888887765432221 111122222222333222 3445567
Q ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCCCCCCCeEEE
Q 018172 249 RLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRFGADAKYARV 328 (360)
Q Consensus 249 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~ 328 (360)
++++++++++.+.|++++++.+..|.+ ++|+|++++ ..+.+.|.++||.++||. |+ ++++|+
T Consensus 267 ~~~~~~~~~l~~~L~~~~g~~~~~~~~-------------~~~~~~~~~--~~~~~~l~~~gi~v~~g~-~~--~~~iRi 328 (356)
T 1v72_A 267 RKANAAAQRLAQGLEGLGGVEVLGGTE-------------ANILFCRLD--SAMIDALLKAGFGFYHDR-WG--PNVVRF 328 (356)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEESCCC-------------SSEEEEEEC--HHHHHHHHHTTCBCBCSS-SS--TTEEEE
T ss_pred HHHHHHHHHHHHHHhhCCCcEEccCCC-------------ccEEEEEcC--HHHHHHHHhcCeEEeccc-cC--CCeEEE
Confidence 778888999999998876665544433 347788776 356666788899999987 65 679999
Q ss_pred EecC--ChHHHHHHHHHHHHHHhch
Q 018172 329 SMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 329 s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
++.. ++|++++++++|++++++.
T Consensus 329 ~~~~~~~~~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 329 VTSFATTAEDVDHLLNQVRLAADRT 353 (356)
T ss_dssp ECCTTCCHHHHHHHHHHHHHTC---
T ss_pred EecCCCCHHHHHHHHHHHHHHHHhh
Confidence 9754 8999999999999988654
No 136
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.95 E-value=1.1e-26 Score=217.66 Aligned_cols=291 Identities=15% Similarity=0.118 Sum_probs=204.7
Q ss_pred ccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHHHH
Q 018172 27 LSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAETD 105 (360)
Q Consensus 27 y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~~ 105 (360)
|.+..+. .++|++++++++. + ++|++|+| |+++++++..+ +++||+ |+++.|+|..+...++
T Consensus 34 ~~~~~~~-----~~l~~~la~~~~~------~-~~i~~~sG-t~al~~~l~~l~~~~gd~----Vi~~~~~~~~~~~~~~ 96 (388)
T 1b9h_A 34 RMGGDEV-----NSFEREFAAHHGA------A-HALAVTNG-THALELALQVMGVGPGTE----VIVPAFTFISSSQAAQ 96 (388)
T ss_dssp TTTCSHH-----HHHHHHHHHHTTC------S-EEEEESCH-HHHHHHHHHHTTCCTTCE----EEEESSSCTHHHHHHH
T ss_pred ecCCHHH-----HHHHHHHHHHhCC------C-eEEEeCCH-HHHHHHHHHHcCCCCcCE----EEECCCccHHHHHHHH
Confidence 4445555 9999999999985 3 57888777 89999999999 889998 9999999999999999
Q ss_pred HhCCeeeeecCCccc--ccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCc-C-C
Q 018172 106 YLRSGLYKWDGDANT--FDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTP-I-T 173 (360)
Q Consensus 106 ~~g~~~~~~~~~~~~--~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~-~-~ 173 (360)
..|++++.++++.+. ++. ++++++|+ |+||||.+.+ +.+.++|+++|+++|+|++|+.+.... . .
T Consensus 97 ~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~~~ 173 (388)
T 1b9h_A 97 RLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRV 173 (388)
T ss_dssp HTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEG
T ss_pred HcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCccCCeec
Confidence 999999999877542 221 35778777 9999999988 778888998999999999998543210 1 1
Q ss_pred CCCCccEEEeccccccCCCCceEEEEeecCHHH--HHHHHHHHhhc-----------cccCC-hHHHHHHHHHhcccCCC
Q 018172 174 GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEV--ARKMTRFIELG-----------SIGVS-KESQLRAAKILGIVSDD 239 (360)
Q Consensus 174 ~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~--~~~l~~~~~~~-----------~~~~~-~~~~~~~~~~l~~~~~~ 239 (360)
...+ ++.+.||||..+++|.|+||++++++.+ ++.+....... ..+.+ .+.+.+++.++..
T Consensus 174 ~~~~-~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~---- 248 (388)
T 1b9h_A 174 GELD-SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQ---- 248 (388)
T ss_dssp GGSS-SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHH----
T ss_pred cccc-ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHH----
Confidence 1222 6889999977666677999999843335 56665443210 00111 1222222222221
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----h-HHHHHHHHhhCeeee
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----D-EDCEKLLRAERIMAR 314 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~l~~~gI~~~ 314 (360)
.+++++.+++++++++++.+.|++++++.+..+... .....++++|+.+++ . +.+.+.|.++||.++
T Consensus 249 -~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~ 320 (388)
T 1b9h_A 249 -LARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVR-------ADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAF 320 (388)
T ss_dssp -HTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTT-------CCBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEE
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcC-------CCccceEEEEEEeCCcCcccHHHHHHHHHHCCCCcc
Confidence 145677888888999999999998866554432110 001224578888874 2 667788888999998
Q ss_pred CCCCCC----------CC------------------CCeEEEEecC---ChHHHHHHHHHHHHHHhc
Q 018172 315 GGRRFG----------AD------------------AKYARVSMLS---REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 315 pg~~f~----------~~------------------~~~~R~s~~~---~~e~~~~~~~~l~~~~~~ 350 (360)
++.... .. .+.+||++.. ++|++++++++|++++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 321 AAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp ECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 864310 00 1259999855 789999999999998754
No 137
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.95 E-value=1.1e-26 Score=218.51 Aligned_cols=281 Identities=11% Similarity=0.072 Sum_probs=198.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEE-cCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc-HHHHHHh--CCeeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVI-GTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY-PAETDYL--RSGLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~-t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~-~~~~~~~--g~~~~~~ 114 (360)
+++|+.++++++. .++++|++ |+|++++++.++.+++++| . +++..+.|... ...+... |.+++.+
T Consensus 81 ~~~~~~la~~~g~-----~~~~~i~~~t~g~t~al~~~~~~l~~~g-v----~~v~~~~~~~~~~~~~~~~~~g~~~~~v 150 (398)
T 2fyf_A 81 GRVRSGLAELFSL-----PDGYEVILGNGGATAFWDAAAFGLIDKR-S----LHLTYGEFSAKFASAVSKNPFVGEPIII 150 (398)
T ss_dssp HHHHHHHHHHTTC-----CTTCEEEEEETCHHHHHHHHHHHTCSSC-E----EEEECSHHHHHHHHHHHHCTTSCCCEEE
T ss_pred HHHHHHHHHHhCC-----CCCceEEEeCCchhHHHHHHHHHhcCCC-e----EEEeCCHHHHHHHHHHHHhCCCCceEEE
Confidence 7889999998885 12358998 9999999999999998876 1 23344444321 2244555 7888888
Q ss_pred cCCccccc----cCCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 115 DGDANTFD----KNNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 115 ~~~~~~~~----~~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
+.+ ++.. .++++++|++++|+||||.+++ +++.++ +|+++|+|++|..+..+. +..+.++++.|+||.+
T Consensus 151 ~~~-~g~~~~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~--~~~~~di~~~s~sK~~ 224 (398)
T 2fyf_A 151 TSD-PGSAPEPQTDPSVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPV--DIAETDAYYFAPQKNF 224 (398)
T ss_dssp ECC-TTCCCCCCCCTTCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCC--CGGGCSEEEECTTSTT
T ss_pred ecC-CCCCCCccccCCCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCccc--CcccCcEEEEecCccc
Confidence 776 2221 2467899999999999999988 333332 899999999998654321 1123678999999999
Q ss_pred CCCCceEEEEeecCHHHHHHHHHHH---------------------hhccccCChHHHHHHHHHhcccCCCchhHHHHHH
Q 018172 190 GHAGSRIGWALVKDTEVARKMTRFI---------------------ELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGR 248 (360)
Q Consensus 190 ~~~G~r~G~~~~~~~~~~~~l~~~~---------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 248 (360)
+++| ++||+++ ++++++.+.+.. .....+.+...+.++.++++.+.+. .++++.+
T Consensus 225 ~~~g-g~g~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~--g~~~~~~ 300 (398)
T 2fyf_A 225 ASDG-GLWLAIM-SPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGN--GGLDWAV 300 (398)
T ss_dssp CSCS-SEEEEEE-CHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHH--TSHHHHH
T ss_pred CCCC-ceEEEEE-CHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHc--cCHHHHH
Confidence 9775 6999998 788888875431 1122346666777777777643210 2278899
Q ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCC-cccccCCc---hHHHHHHHHhhCeeeeCCCCCCCCCC
Q 018172 249 RLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPG-FAWLESKE---DEDCEKLLRAERIMARGGRRFGADAK 324 (360)
Q Consensus 249 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~l~~~gI~~~pg~~f~~~~~ 324 (360)
++++++++++.+.|++++++.+..+... ..++ ++|+.+++ ...+.+.|.++||.+++|... .+.+
T Consensus 301 ~~~~~~~~~l~~~L~~~~g~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~-~~~~ 369 (398)
T 2fyf_A 301 KRTADSSQRLYSWAQERPYTTPFVTDPG----------LRSQVVGTIDFVDDVDAGTVAKILRANGIVDTEPYRK-LGRN 369 (398)
T ss_dssp HHHHHHHHHHHHHHHHSTTEEESCCSGG----------GBCSSEEEEEECTTSCHHHHHHHHHHTTCBCCSCCTT-TCSS
T ss_pred HHHHHHHHHHHHHHHHcCCceeccCChh----------hcCCcEEEEECCCCCCHHHHHHHHHHCCcEEecCccc-CCCC
Confidence 9999999999999999865555421100 0122 67887753 367778888889999987322 2357
Q ss_pred eEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 325 YARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 325 ~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
++|+|+.. ++|++++++++|++++++
T Consensus 370 ~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 370 QLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 99999974 899999999999998764
No 138
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.95 E-value=1.6e-27 Score=226.12 Aligned_cols=277 Identities=12% Similarity=0.023 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHH---hhcCCCCCCCceEEEeCCCCCCcH-HHHHHhCCe----
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALY---ALSSPGGPEPISVVSAAPYYSQYP-AETDYLRSG---- 110 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~---~l~~~gd~~~~~vl~~~p~~~~~~-~~~~~~g~~---- 110 (360)
.+||++++++++ + . .+++|++|+|+++++..++. .+.++| . |++++|+|+.+. ..+...|.+
T Consensus 87 ~~l~~~la~~~~--~-~--~~~~v~~~~g~~~a~~~~~~~a~~~~~~~-~----vi~~~p~y~~~~~~~~~~~g~~~~~~ 156 (426)
T 1sff_A 87 LELCEIMNQKVP--G-D--FAKKTLLVTTGSEAVENAVKIARAATKRS-G----TIAFSGAYHGRTHYTLALTGKVNPYS 156 (426)
T ss_dssp HHHHHHHHHHSS--C-S--SCEEEEEESSHHHHHHHHHHHHHHHHTCC-E----EEEETTCCCCSSHHHHHHSSCCTTTT
T ss_pred HHHHHHHHHhCC--c-c--cccEEEEeCchHHHHHHHHHHHHHhhCCC-e----EEEECCCcCCCchHhhhhcCCccccc
Confidence 999999999984 1 1 23689999999999999988 667766 5 999999998765 456655643
Q ss_pred ---------eeeecCCc-----------ccccc--C-----CCeeEEEE-cCCCCCCc-ccch----HHHHHHhhhcCcE
Q 018172 111 ---------LYKWDGDA-----------NTFDK--N-----NGAYIEVV-NSPNNPDG-TIRE----AVLAKVNRSAEGK 157 (360)
Q Consensus 111 ---------~~~~~~~~-----------~~~~~--~-----~~~~~i~~-~~p~NPtG-~~~~----~~~~~~~~~~~~~ 157 (360)
++.++.+. +.++. + +++++|++ ++++| || ..++ +.+.++|+++|++
T Consensus 157 ~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~ 235 (426)
T 1sff_A 157 AGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIM 235 (426)
T ss_dssp TTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCE
T ss_pred cccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCE
Confidence 55555432 12211 1 46677777 46778 99 5564 4667889999999
Q ss_pred EEEeecccCCCCC-c-C-CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhc
Q 018172 158 LIHDLAYYWPQYT-P-I-TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILG 234 (360)
Q Consensus 158 li~D~ay~~~~~~-~-~-~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 234 (360)
+|+||+|.+.... . . ....+....+.||||.++. |+|+||+++ ++++++.+.......+.+.|++.|.++.++++
T Consensus 236 li~De~~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~-GlriG~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~ 313 (426)
T 1sff_A 236 LIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAG-GFPLAGVTG-RAEVMDAVAPGGLGGTYAGNPIACVAALEVLK 313 (426)
T ss_dssp EEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGGT-SSCCEEEEE-EHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHH
T ss_pred EEEechhhccCcccchhhhhhcCCCCCEEEEcccccC-CCceEEEEE-cHHHHhhhccCCcCcCCCCCHHHHHHHHHHHH
Confidence 9999999943211 1 1 1222333445599999995 999999999 78888877643334567789999999988777
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHhc----CCcccCCCCCcccccccccCCCCCCcccccCC--------c---h
Q 018172 235 IVSDDYPNFFEYGRRLMSERWNMLRQVIRQS----GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK--------E---D 299 (360)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~ 299 (360)
.+.+ ++..++++++++++.+.|+++ +.+... .+.++|+|++++ + .
T Consensus 314 ~~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--------------~~~g~~~~~~~~~~~~~~~~~~~~~ 373 (426)
T 1sff_A 314 VFEQ------ENLLQKANDLGQKLKDGLLAIAEKHPEIGDV--------------RGLGAMIAIELFEDGDHNKPDAKLT 373 (426)
T ss_dssp HHHH------TTHHHHHHHHHHHHHHHHHHHHHTCTTEEEE--------------EEETTEEEEEEBGGGCTTSBCHHHH
T ss_pred HHHh------cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE--------------EEEEEEEEEEEecCccccCCChHHH
Confidence 4422 134455666667777766654 211111 123457788773 2 2
Q ss_pred HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec--CChHHHHHHHHHHHHHHhch
Q 018172 300 EDCEKLLRAERIMARGGRRFGADAKYARVSML--SREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 300 ~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~~ 351 (360)
..+.+.|.++||.++||..+ ++++||+++ .+++++++++++|++++.+.
T Consensus 374 ~~l~~~l~~~gi~v~~~~~~---~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 374 AEIVARARDKGLILLSCGPY---YNVLRILVPLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp HHHHHHHHHTTEECEEESTT---SCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCcEEecCCCC---CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 55677777889999998764 569999985 39999999999999998653
No 139
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.95 E-value=2.7e-27 Score=222.23 Aligned_cols=275 Identities=10% Similarity=0.045 Sum_probs=200.4
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCC----------CCCCCceEEEeCCCCCCcHHHHHHh
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSP----------GGPEPISVVSAAPYYSQYPAETDYL 107 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~----------gd~~~~~vl~~~p~~~~~~~~~~~~ 107 (360)
..++++.++++++ . +++++|+|+++++..++..+..+ ++. |+++.|+|......+...
T Consensus 80 ~~~l~~~la~~~g-------~-~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~----vi~~~~~~~~~~~~~~~~ 147 (392)
T 3ruy_A 80 LGPWYEKVAKLTN-------K-EMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAE----IIVCEDNFHGRTMGAVSM 147 (392)
T ss_dssp HHHHHHHHHHHHT-------C-SEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCE----EEEETTCCCCSSHHHHHT
T ss_pred HHHHHHHHHHhcC-------C-CEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcE----EEEEcCCcCCCCHhhhhc
Confidence 4888888888887 3 48999999999999999877643 455 999999998776665544
Q ss_pred CCe-------------eeeecC-Ccccccc--CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccC
Q 018172 108 RSG-------------LYKWDG-DANTFDK--NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYW 166 (360)
Q Consensus 108 g~~-------------~~~~~~-~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~ 166 (360)
+.. +..++. |.+.++. ++++++|++++|+||||.+++ +.+.++|+++|+++|+||+|.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~ 227 (392)
T 3ruy_A 148 SSNEEYKRGFGPMLPGIIVIPYGDLEALKAAITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTG 227 (392)
T ss_dssp CSCTTTTTTCCSCCSSEEEECTTCHHHHHHHCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTT
T ss_pred cCChhhccccCCCCCCCeeeCcccHHHHHHHhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhC
Confidence 322 334443 3333332 468999999999999999986 4677889999999999999974
Q ss_pred CCCC--cC-CCCCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchh
Q 018172 167 PQYT--PI-TGAADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 167 ~~~~--~~-~~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
.... .. ....+...-+.||||.++ +| +|+||+++ ++++++.+.......+++.+++.+.++.++++.+ .
T Consensus 228 ~~~~g~~~~~~~~~~~~d~~~~SK~l~-gG~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~ 300 (392)
T 3ruy_A 228 LGRTGKVFACDWDNVTPDMYILGKALG-GGVFPISCAAA-NRDILGVFEPGSHGSTFGGNPLACAVSIAALEVL-----E 300 (392)
T ss_dssp TTTTSSSSGGGGGTCCCSEEEECGGGG-TTTSCCEEEEE-CHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHH-----H
T ss_pred CCccccchhhhccCCCCCEEEEchhhh-CChhhhEEEEE-CHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHH-----H
Confidence 2211 11 111111112337789877 57 99999999 8898888876666667889999999999988743 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-HHHHHHHHhhCeeeeCCCCCCC
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLRAERIMARGGRRFGA 321 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gI~~~pg~~f~~ 321 (360)
. ++.+++++++++++.+.|++++...+. ...+.++|+++.+++. ..+.+.|.++||.+.||.
T Consensus 301 ~-~~~~~~~~~~~~~l~~~L~~~~~~~~~------------~~~~~g~~~~~~~~~~~~~l~~~l~~~gi~v~~~~---- 363 (392)
T 3ruy_A 301 E-EKLTERSLQLGEKLVGQLKEIDNPMIT------------EVRGKGLFIGIELNEPARPYCEQLKAAGLLCKETH---- 363 (392)
T ss_dssp H-TTHHHHHHHHHHHHHHHHTTCCCTTEE------------EEEEETTEEEEEESSCSHHHHHHHHTTTEECCCBT----
T ss_pred h-hhHHHHHHHHHHHHHHHHHHhcCCCce------------EEEeeeeEEEEEEcchHHHHHHHHHHCCcEEecCC----
Confidence 1 677888999999999999887321110 0112344566666533 777778889999999874
Q ss_pred CCCeEEEEe--cCChHHHHHHHHHHHHHHh
Q 018172 322 DAKYARVSM--LSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 322 ~~~~~R~s~--~~~~e~~~~~~~~l~~~~~ 349 (360)
++++|+++ ..++|++++++++|++++.
T Consensus 364 -~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 392 (392)
T 3ruy_A 364 -ENVIRIAPPLVISEEDLEWAFQKIKAVLS 392 (392)
T ss_dssp -TTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHhC
Confidence 67999994 3489999999999998863
No 140
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.95 E-value=7.7e-27 Score=219.31 Aligned_cols=289 Identities=12% Similarity=0.056 Sum_probs=196.1
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH----HHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA----ETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~----~~~~~g~~~~~ 113 (360)
..++|++++++++. ++ .+++++++++++.++. ++++||+ |+++.|+|.+... .++..|++++.
T Consensus 57 ~~~lr~~la~~~g~-------~~-~i~~~sGt~a~~~al~-~~~~gd~----Vi~~~~~y~~~~~~~~~~~~~~G~~v~~ 123 (393)
T 1n8p_A 57 RENLERAVAALENA-------QY-GLAFSSGSATTATILQ-SLPQGSH----AVSIGDVYGGTHRYFTKVANAHGVETSF 123 (393)
T ss_dssp HHHHHHHHHHHTTC-------SE-EEEESCHHHHHHHHHH-TSCSSCE----EEEESSCCHHHHHHHHHTSTTTCSCCEE
T ss_pred HHHHHHHHHHHhCC-------Cc-EEEECChHHHHHHHHH-HcCCCCE----EEEeCCCchHHHHHHHHHHHHcCcEEEE
Confidence 38999999999985 33 4445455999999999 8899998 9999999986554 45567999998
Q ss_pred ecCCcccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhc----CcEEEEeecccCCCCCcCCCCCCccEEEeccc
Q 018172 114 WDGDANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSA----EGKLIHDLAYYWPQYTPITGAADHDIMLFTLS 186 (360)
Q Consensus 114 ~~~~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~----~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~s 186 (360)
++.+.+.++. ++++++|++++||||||.+++ +.+.++|+++ |+++|+|++|..+..... ...+.++++.|+|
T Consensus 124 v~~~d~~l~~~i~~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~~~-~~~~~di~~~S~s 202 (393)
T 1n8p_A 124 TNDLLNDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNP-LNFGADIVVHSAT 202 (393)
T ss_dssp ESSHHHHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHCCG-GGGTCSEEEEETT
T ss_pred eCCChHHHHHhcccCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccCCH-HHcCCeEEEEECc
Confidence 8764233332 467999999999999999998 6788888889 999999999985432211 2236889999999
Q ss_pred cccCCCCceE-EEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhc
Q 018172 187 KCTGHAGSRI-GWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQS 265 (360)
Q Consensus 187 K~~~~~G~r~-G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 265 (360)
|.++.+|+|+ ||++++++++++.+.......+.+.++..+.++...++ .+....+...++.+.+.+.|.++
T Consensus 203 K~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~--------~~~~~~~~~~~~~~~l~~~L~~~ 274 (393)
T 1n8p_A 203 KYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLK--------TLHLRVRQAALSANKIAEFLAAD 274 (393)
T ss_dssp TTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT--------THHHHHHHHHHHHHHHHHHHTSC
T ss_pred ccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccc--------hHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999 99988458899988877654455566666655555454 23344555566777778888776
Q ss_pred CC-cccC-CCCC-cc--cccccccCCC-C-CCcccccCCch-HHHH---HHHHhhCeeeeCCC----------CC-----
Q 018172 266 GV-FGLP-EYPL-EY--CNFTGKFTNS-H-PGFAWLESKED-EDCE---KLLRAERIMARGGR----------RF----- 319 (360)
Q Consensus 266 ~~-~~~~-~~~~-~~--~~~~~~~~~~-~-~~~~~~~~~~~-~~~~---~~l~~~gI~~~pg~----------~f----- 319 (360)
+. +... .|.- .. +........+ . ++++++.+++. .... +.|...++.+..|+ .+
T Consensus 275 ~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~ 354 (393)
T 1n8p_A 275 KENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIP 354 (393)
T ss_dssp TTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSC
T ss_pred CCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceECCCCCCCcceeeccccccccccC
Confidence 53 2211 1110 00 0000000012 3 56788888643 3333 33433344443332 11
Q ss_pred -------CCCCCeEEEEecC--ChHHHHHHHHHHHHHH
Q 018172 320 -------GADAKYARVSMLS--REEIFNIFLERLSAIQ 348 (360)
Q Consensus 320 -------~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~ 348 (360)
|..++.+|+|++. ++++++.+.++|+++.
T Consensus 355 ~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~~ 392 (393)
T 1n8p_A 355 KEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQAT 392 (393)
T ss_dssp TTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHhh
Confidence 2235789999977 6788888888887653
No 141
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.95 E-value=1.9e-27 Score=226.15 Aligned_cols=286 Identities=12% Similarity=0.018 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc--------CCCCCCCceEEEeCCCCCCc----------
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS--------SPGGPEPISVVSAAPYYSQY---------- 100 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~--------~~gd~~~~~vl~~~p~~~~~---------- 100 (360)
.++|++++++++. ++++|++|+|+++++..++..+. ++||+ |+++.|+|..+
T Consensus 64 ~~l~~~la~~~g~------~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~----vl~~~p~y~~~~~i~~~~~~h 133 (432)
T 3a9z_A 64 NTARASLAKMIGG------KPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRT----VDQISPEEGTRPHFITCTVEH 133 (432)
T ss_dssp HHHHHHHHHHHTC------CGGGEEEESCHHHHHHHHHHHHHHHHHHHHHHC----------------CCCEEEEETTCC
T ss_pred HHHHHHHHHHcCC------CcCeEEEeCChHHHHHHHHHHHHhhhhhccccCCcc----ccccccccccCCeEEEecCcc
Confidence 6999999999985 45689999999999999999886 58988 99999999876
Q ss_pred -------HHHHHHhCCeeeeecCCc-cc-ccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcC--------
Q 018172 101 -------PAETDYLRSGLYKWDGDA-NT-FDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAE-------- 155 (360)
Q Consensus 101 -------~~~~~~~g~~~~~~~~~~-~~-~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~-------- 155 (360)
...++..|++++.++.+. ++ ++. ++++++|++++|+||||.+++ +++.++|++++
T Consensus 134 ~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~ 213 (432)
T 3a9z_A 134 DSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGL 213 (432)
T ss_dssp HHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhccCCceEEEEECcccCcccccCHHHHHHHHHhcCcccccccC
Confidence 233445699999998764 22 211 357999999999999999998 67788888888
Q ss_pred --cEEEEeecccCCCCCcCCCCCCccEEEeccccccCCCCceEEEEeecCHHH-HHHHHHH-------HhhccccCChHH
Q 018172 156 --GKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEV-ARKMTRF-------IELGSIGVSKES 225 (360)
Q Consensus 156 --~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~-~~~l~~~-------~~~~~~~~~~~~ 225 (360)
+++|+|++|..+.........+.++++.|+||.+| .|+||+++ ++++ ...+... ......+.+.+.
T Consensus 214 ~~~~livDea~~~~~~~~~~~~~~~d~~~~s~~K~~g---~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (432)
T 3a9z_A 214 PRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYG---PRIGALYV-RGVGKLTPLYPMLFGGGQERNFRPGTENTPM 289 (432)
T ss_dssp CCCEEEEECTTTTTTSCCCHHHHCCSEEEEEGGGTTC---CSCEEEEE-TTBTTTBCCCCSCCSSCGGGGTSCSCCCHHH
T ss_pred CceEEEEEchhhhCCcccChhhcCCCEEEEehhHhcC---CcceEEEE-ccccccCCcCceeecCCccccccCCCcCHHH
Confidence 99999999986543211112245678999999875 45999999 4443 2222211 122334677788
Q ss_pred HHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCccc--CCCC-CcccccccccCCCCCCcccccCCc----
Q 018172 226 QLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGL--PEYP-LEYCNFTGKFTNSHPGFAWLESKE---- 298 (360)
Q Consensus 226 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---- 298 (360)
+.++.++++.+. .++++.+++++++++++.+.|++++++.+ ..+. +.. ..+.++++.+++
T Consensus 290 ~~a~~aal~~~~----~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 356 (432)
T 3a9z_A 290 IAGLGKAADLVS----ENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVE---------RLPNTCNFSIQGSQLR 356 (432)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCC---------BCTTEEEEEECSTTCC
T ss_pred HHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCccc---------CCCCEEEEEeCCCCCc
Confidence 877777776432 56889999999999999999988633322 1221 000 111122333322
Q ss_pred hHHHHHHHHhhCeeeeCCCCC---------------CCC----CCeEEEEecC--ChHHHHHHHHHHHHHHhchhc
Q 018172 299 DEDCEKLLRAERIMARGGRRF---------------GAD----AKYARVSMLS--REEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 299 ~~~~~~~l~~~gI~~~pg~~f---------------~~~----~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~~ 353 (360)
...+.+.+ .+|.+.+|..+ |.. .+++||++.. ++|++++++++|++++++.++
T Consensus 357 ~~~~~~~l--~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~ 430 (432)
T 3a9z_A 357 GYMVLAQC--QTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG 430 (432)
T ss_dssp HHHHHHHC--SSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHh--cCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 23343333 37777776544 211 3799999976 899999999999999876543
No 142
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.95 E-value=2.2e-26 Score=216.77 Aligned_cols=275 Identities=15% Similarity=0.127 Sum_probs=197.0
Q ss_pred HHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc---HHHHHHhCC--eeeeecCCc
Q 018172 44 AINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY---PAETDYLRS--GLYKWDGDA 118 (360)
Q Consensus 44 ~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~---~~~~~~~g~--~~~~~~~~~ 118 (360)
.++++++. +.++|++++| ++++..++..++++||+ |+++.|+|..+ ...++..|. ..+.++++.
T Consensus 77 ~la~~~g~------~~~~i~~~sG-t~a~~~~~~~~~~~gd~----Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 145 (407)
T 2dkj_A 77 RAKALFGA------AWANVQPHSG-SQANMAVYMALMEPGDT----LMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRP 145 (407)
T ss_dssp HHHHHHTC------SEEECCCSSH-HHHHHHHHHHHCCTTCE----EEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCT
T ss_pred HHHHHhCC------CcceEEecch-HHHHHHHHHHhcCCCCE----EEEecccccCccchHHHHHhcCceEEEEecCCCc
Confidence 67777775 3434666666 56999999999999998 99999999998 355566666 444443332
Q ss_pred c--cccc-------C-CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCC----CCCcCCCCCCccEEEe
Q 018172 119 N--TFDK-------N-NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWP----QYTPITGAADHDIMLF 183 (360)
Q Consensus 119 ~--~~~~-------~-~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~----~~~~~~~~~~~~i~~~ 183 (360)
+ .++. + .++++|++++|+|| ...+ +.+.++|+++|+++|+|++|..+ ...... ....+++++
T Consensus 146 ~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~-~~~~di~~~ 222 (407)
T 2dkj_A 146 DTELIDLEEVRRLALEHRPKVIVAGASAYP--RFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNP-LPYAHVVTS 222 (407)
T ss_dssp TTSSCCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCC-TTTCSEEEE
T ss_pred ccCccCHHHHHHHHhhcCCeEEEEeccccC--CCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCc-cccccEEEE
Confidence 1 1211 1 37899999999998 3444 67778888899999999999741 111111 113689999
Q ss_pred ccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHH-HHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 018172 184 TLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQL-RAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVI 262 (360)
Q Consensus 184 S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 262 (360)
|+||.+ +|.|+||++++++++++.+......+..+.+.+.+. ++.++++.... .++++.+++++++++++.+.|
T Consensus 223 s~sK~l--~g~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~~~~l~~~L 297 (407)
T 2dkj_A 223 TTHKTL--RGPRGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQ---PEFKEYSRLVVENAKRLAEEL 297 (407)
T ss_dssp ESSGGG--CCCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHS---HHHHHHHHHHHHHHHHHHHHH
T ss_pred eccccC--CCCCceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHH
Confidence 999954 588999999933899999887764444444334333 55556653322 678899999999999999999
Q ss_pred HhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHHhhCeeeeCCCCC----C-CCCCeEEEEec--
Q 018172 263 RQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLRAERIMARGGRRF----G-ADAKYARVSML-- 331 (360)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gI~~~pg~~f----~-~~~~~~R~s~~-- 331 (360)
+++ ++.+..+. +.++|+|+.++. ...+.+.|.++||.+++|..| + ..++++|+++.
T Consensus 298 ~~~-g~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~ 364 (407)
T 2dkj_A 298 ARR-GYRIVTGG------------TDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAI 364 (407)
T ss_dssp HHT-TCEEGGGS------------CSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHH
T ss_pred HhC-CceeecCC------------CCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccc
Confidence 988 44443211 234477888763 367778888999999998754 2 13678999995
Q ss_pred ----CChHHHHHHHHHHHHHHhc
Q 018172 332 ----SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 332 ----~~~e~~~~~~~~l~~~~~~ 350 (360)
.+++++++++++|++++++
T Consensus 365 ~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 365 TTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp HHTTCCGGGHHHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHHHHhc
Confidence 6899999999999999876
No 143
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.95 E-value=1.4e-26 Score=218.13 Aligned_cols=278 Identities=15% Similarity=0.086 Sum_probs=201.4
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC-------CC-CCCCceEEEeCCCCCCcHHHHHHhCC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS-------PG-GPEPISVVSAAPYYSQYPAETDYLRS 109 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~-------~g-d~~~~~vl~~~p~~~~~~~~~~~~g~ 109 (360)
..++++.++++++ . ++|++|+|+++++..++..+.. +| |. |++++|+|..+...+...+.
T Consensus 83 ~~~l~~~la~~~~-------~-~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~----vi~~~~~y~~~~~~~~~~~~ 150 (406)
T 4adb_A 83 VLRLAKKLIDATF-------A-DRVFFCNSGAEANEAALKLARKFAHDRYGSHKSG----IVAFKNAFHGRTLFTVSAGG 150 (406)
T ss_dssp HHHHHHHHHHHSS-------C-SEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCE----EEEETTCCCCSSHHHHHHSS
T ss_pred HHHHHHHHHhhCC-------C-CeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcE----EEEECCCcCCCcHHHhhccC
Confidence 3777777777775 2 3899999999999999998864 55 66 99999999999766665554
Q ss_pred -------------eeeeecC-Ccccccc--CCCeeEEEEcCCCCCCcccc--h----HHHHHHhhhcCcEEEEeecccCC
Q 018172 110 -------------GLYKWDG-DANTFDK--NNGAYIEVVNSPNNPDGTIR--E----AVLAKVNRSAEGKLIHDLAYYWP 167 (360)
Q Consensus 110 -------------~~~~~~~-~~~~~~~--~~~~~~i~~~~p~NPtG~~~--~----~~~~~~~~~~~~~li~D~ay~~~ 167 (360)
++..++. |.+.++. ++++++|+++ |+||||.++ + +.+.++|+++|+++|+||+|.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~ 229 (406)
T 4adb_A 151 QPAYSQDFAPLPADIRHAAYNDINSASALIDDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGV 229 (406)
T ss_dssp CGGGTGGGCSCCSSEEEECTTCHHHHHTTCSTTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred CccccccCCCCCCCceEeCCCcHHHHHHHhcCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 3333332 3333333 3678999988 999999876 4 46778899999999999999742
Q ss_pred CCCc--CC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchh
Q 018172 168 QYTP--IT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 168 ~~~~--~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
.... .. .....+++ ||||.++ +|+|+||+++ ++++++.+.......+++.+++.|.++.++++.+..
T Consensus 230 ~~~g~~~~~~~~~~~~d~~--t~sK~~~-~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---- 301 (406)
T 4adb_A 230 GRTGELYAYMHYGVTPDLL--TTAKALG-GGFPVGALLA-TEECARVMTVGTHGTTYGGNPLASAVAGKVLELINT---- 301 (406)
T ss_dssp TTTSSSSHHHHHTCCCSEE--EECGGGG-TTSCCEEEEE-CHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS----
T ss_pred CccchhHHHHhcCCCCCEE--Eechhhc-CCCCeEEEEE-cHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh----
Confidence 2111 11 01122333 7799999 9999999998 899998887766566788999999999988875421
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-----hHHHHHHHHhhCeeeeCCC
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-----DEDCEKLLRAERIMARGGR 317 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~gI~~~pg~ 317 (360)
++.+++++++++++.+.|+++.. ...... ...+.++++|+.+++ ...+.+.|.++||.+.|+.
T Consensus 302 --~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~ 369 (406)
T 4adb_A 302 --PEMLNGVKQRHDWFVERLNTINH-RYGLFS---------EVRGLGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAG 369 (406)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHH-HHCCEE---------EEEEETTEEEEEECTTTTTCHHHHHHHHHHTTEECEESS
T ss_pred --cCHHHHHHHHHHHHHHHHHHHHH-hCCCce---------EEEEEEEEEEEEEeCCcHHHHHHHHHHHHHCCcEEeecC
Confidence 56777888888888888877521 000000 011234467777764 3677788888899999854
Q ss_pred CCCCCCCeEEEEe--cCChHHHHHHHHHHHHHHhchhc
Q 018172 318 RFGADAKYARVSM--LSREEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 318 ~f~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~~~~ 353 (360)
++++|+++ ..++|++++++++|++++++.++
T Consensus 370 -----~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~ 402 (406)
T 4adb_A 370 -----GNVVRFAPALNVSEEEVTTGLDRFAAACEHFVS 402 (406)
T ss_dssp -----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred -----CCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 67999954 44999999999999999987654
No 144
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.95 E-value=1.3e-26 Score=220.41 Aligned_cols=284 Identities=9% Similarity=-0.038 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC--------CCCCCCceEEEeCCCCCCcHHHHHHhCC-
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS--------PGGPEPISVVSAAPYYSQYPAETDYLRS- 109 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~--------~gd~~~~~vl~~~p~~~~~~~~~~~~g~- 109 (360)
.++++.++++++. ..++|++|+|+++++..++..+.. +++. |++.+|+|..+...+..++.
T Consensus 75 ~~l~~~la~~~~~------~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~----vi~~~~~yhg~~~~~~~~~~~ 144 (430)
T 3i4j_A 75 EEYAGRLARFVGL------PTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFK----VITRVPSYHGASLGSLAASGM 144 (430)
T ss_dssp HHHHHHHHHHTTC------TTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCE----EEEETTC--------------
T ss_pred HHHHHHHHHhCCC------CCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcE----EEEEeCCcCCCCcccccccCc
Confidence 5566666665542 345899999999999999988863 3455 99999999988766554433
Q ss_pred --------------eeeeecCCc---------ccccc--C----CCeeEEEEcCCCC-CCcccch-----HHHHHHhhhc
Q 018172 110 --------------GLYKWDGDA---------NTFDK--N----NGAYIEVVNSPNN-PDGTIRE-----AVLAKVNRSA 154 (360)
Q Consensus 110 --------------~~~~~~~~~---------~~~~~--~----~~~~~i~~~~p~N-PtG~~~~-----~~~~~~~~~~ 154 (360)
++..++.+. +.++. + .++++|+++.+|| ++|...+ +.+.++|+++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~ 224 (430)
T 3i4j_A 145 GARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEA 224 (430)
T ss_dssp -----------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHH
T ss_pred cccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHc
Confidence 233333221 22221 1 3455666666677 8998654 4677889999
Q ss_pred CcEEEEeecccCCCCC-cC--CCCC-CccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHH----HhhccccCChHH
Q 018172 155 EGKLIHDLAYYWPQYT-PI--TGAA-DHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRF----IELGSIGVSKES 225 (360)
Q Consensus 155 ~~~li~D~ay~~~~~~-~~--~~~~-~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~----~~~~~~~~~~~~ 225 (360)
|+++|+||+|.+.... .. .... +...-+.+|||.++ .| +|+||+++ ++++++.+.+. ....+++.|+++
T Consensus 225 ~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK~l~-~G~~r~G~~~~-~~~i~~~~~~~~~~~~~~~t~~~~~~~ 302 (430)
T 3i4j_A 225 GIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGKGLA-AGYAPLAGLLA-APQVYETVMGGSGAFMHGFTYAGHPVS 302 (430)
T ss_dssp TCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECGGGT-TTSSCCEEEEE-CHHHHHHHHHTTCBCCCCCTTTTCHHH
T ss_pred CCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEccccc-CCccccEEEEE-CHHHHHHHhccCCcccccCCCCCCHHH
Confidence 9999999999843211 11 1112 22222447899999 69 99999999 89999999874 344667899999
Q ss_pred HHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch------
Q 018172 226 QLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED------ 299 (360)
Q Consensus 226 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 299 (360)
|.++.++++.+.+. .+.++.++..+..++.+.+.+.+++.+....+. ++|+++.+.+.
T Consensus 303 ~aaa~aal~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--------------g~~~~~~~~~~~~~~~~ 366 (430)
T 3i4j_A 303 VAAGLSVLDIVERE--DLTGAAKERGAQLLAGLQALQARFPQMMQVRGT--------------GLLLGVVLGDLATGQAF 366 (430)
T ss_dssp HHHHHHHHHHHHHT--THHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE--------------TTEEEEEEC--------
T ss_pred HHHHHHHHHHHHcc--cHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE--------------EEEEEEEeccccccCCC
Confidence 99999988754332 566666666666666666666566544433332 33556655321
Q ss_pred ------HHHHHHHHhhCeeeeCCCCC--CCCCCeEEEEec--CChHHHHHHHHHHHHHHhc
Q 018172 300 ------EDCEKLLRAERIMARGGRRF--GADAKYARVSML--SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 300 ------~~~~~~l~~~gI~~~pg~~f--~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~ 350 (360)
..+.+.|.++||.++|+..+ +...+++||+++ .++|++++++++|++++++
T Consensus 367 ~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 427 (430)
T 3i4j_A 367 ETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALED 427 (430)
T ss_dssp ----CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 45777788999999997422 224679999986 4999999999999999875
No 145
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.94 E-value=2.2e-25 Score=207.75 Aligned_cols=289 Identities=13% Similarity=0.105 Sum_probs=206.5
Q ss_pred cccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 26 YLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
.|.+..+. .++|++++++++. + ++++++|+++++..++..+ +++||+ |+++.|+|..+...+
T Consensus 33 ~~~~~~~~-----~~l~~~la~~~~~-------~-~~~~~~~gt~a~~~~~~~~~~~~gd~----v~~~~~~~~~~~~~~ 95 (374)
T 3uwc_A 33 DFTLGAEL-----EKFEKRFAALHNA-------P-HAIGVGTGTDALAMSFKMLNIGAGDE----VITCANTFIASVGAI 95 (374)
T ss_dssp CCSSCHHH-----HHHHHHHHHHTTC-------S-EEEEESCHHHHHHHHHHHTTCCTTCE----EEEESSSCHHHHHHH
T ss_pred CcccChhH-----HHHHHHHHHHhCC-------C-cEEEeCCHHHHHHHHHHHcCCCCCCE----EEECCCccHHHHHHH
Confidence 35555665 9999999999985 3 7889999999999999999 999998 999999999999999
Q ss_pred HHhCCeeeeecCC------cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCc-CCC
Q 018172 105 DYLRSGLYKWDGD------ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTP-ITG 174 (360)
Q Consensus 105 ~~~g~~~~~~~~~------~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~-~~~ 174 (360)
+..|.+++.++.+ .+.+.. ++++++|+ |+||||...+ +.+.++|+++|+++|+|++|..+.... ..-
T Consensus 96 ~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~ 172 (374)
T 3uwc_A 96 VQAGATPVLVDSENGYVIDPEKIEAAITDKTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDKFV 172 (374)
T ss_dssp HHTTCEEEEECBCTTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEET
T ss_pred HHcCCEEEEEecCCCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeec
Confidence 9999999998875 222322 35778877 8999999988 778888999999999999998643211 111
Q ss_pred CCCccEEEeccc--cccCCCCceEEEEeecCHHHHHHHHHHHhhcc------------ccCChHHHHHHHHHhcccCCCc
Q 018172 175 AADHDIMLFTLS--KCTGHAGSRIGWALVKDTEVARKMTRFIELGS------------IGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 175 ~~~~~i~~~S~s--K~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~------------~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
....++++.|+| |.++.+|. .|+++++++++.+.+........ ...+.....+....+
T Consensus 173 ~~~~d~~~~s~~~~K~l~~~g~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~------- 244 (374)
T 3uwc_A 173 GSWGQFACFSLHPLKNLNVWSD-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLM------- 244 (374)
T ss_dssp TSSSSEEEEECSSSSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHG-------
T ss_pred cccccEEEEeCCCCCcCCccce-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHH-------
Confidence 111478888877 99985465 88988867788888877653211 112222222221111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCC-cccCCCC-CcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCC
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGV-FGLPEYP-LEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRR 318 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~ 318 (360)
..+++..++.+++.+++.+.|+++++ +.+.... +....| ..+.+..++.+.+.+.|+++||.++++..
T Consensus 245 -~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~L~~~gi~v~~~~~ 314 (374)
T 3uwc_A 245 -NQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVF---------HIYVLRVKYRDQLFQYLKDNGIEVKIHYP 314 (374)
T ss_dssp -GGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCC---------SSEEEEETTHHHHHHHHHHTTBCCBCSCS
T ss_pred -HHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceee---------EEEEEEcCCHHHHHHHHHHCCCccccCCC
Confidence 45667778888888899999988875 5543222 111110 01223334447888889999999998752
Q ss_pred C-----------CC-----------CCCeEEEEecC--ChHHHHHHHHHHHHHHhchh
Q 018172 319 F-----------GA-----------DAKYARVSMLS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 319 f-----------~~-----------~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
. +. ..+.+|+++.. ++|++++++++|++++++..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~~~ 372 (374)
T 3uwc_A 315 IAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLEKH 372 (374)
T ss_dssp SCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHTTT
T ss_pred CccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 1 00 01579998865 89999999999999997653
No 146
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.94 E-value=8.2e-27 Score=219.11 Aligned_cols=274 Identities=15% Similarity=0.070 Sum_probs=194.8
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc--CCCCCCCceEEEeCCCCCCc-HHHHHHhCCe----
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS--SPGGPEPISVVSAAPYYSQY-PAETDYLRSG---- 110 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~--~~gd~~~~~vl~~~p~~~~~-~~~~~~~g~~---- 110 (360)
..++++.++++++. ..++|++|+|+++++..++..+. .+|+. |++++|+|+.. ...+...|.+
T Consensus 89 ~~~l~~~la~~~~~------~~~~v~~~~gg~~a~~~al~~~~~~~~~~~----vi~~~~~y~~~~~~~~~~~g~~~~~~ 158 (395)
T 1vef_A 89 RGEFYRTLTAILPP------ELNRVFPVNSGTEANEAALKFARAHTGRKK----FVAAMRGFSGRTMGSLSVTWEPKYRE 158 (395)
T ss_dssp HHHHHHHHHHTSCT------TEEEEEEESSHHHHHHHHHHHHHHHHSCCE----EEEETTCCCCSSHHHHHTCCCHHHHG
T ss_pred HHHHHHHHHHhcCC------CcCEEEEcCcHHHHHHHHHHHHHHHhCCCe----EEEEcCCcCCCchhhhhhcCCccccc
Confidence 37888888888753 34689999999999999998764 56776 99999999754 4566666765
Q ss_pred --------eeeec-CCcccccc--CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCC--cC
Q 018172 111 --------LYKWD-GDANTFDK--NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYT--PI 172 (360)
Q Consensus 111 --------~~~~~-~~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~--~~ 172 (360)
+..++ .|.+.++. ++++++|+++.++||||.+++ +.+.++|+++|+++|+|++|.+.... ..
T Consensus 159 ~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~ 238 (395)
T 1vef_A 159 PFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF 238 (395)
T ss_dssp GGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS
T ss_pred ccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchh
Confidence 33333 23344432 457889888777889998764 45678899999999999999842111 11
Q ss_pred C---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHH
Q 018172 173 T---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRR 249 (360)
Q Consensus 173 ~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 249 (360)
. .....+++ ||||.++. |+|+||+++ ++++++.+.......+++.+.+.+.++.++++.+. . ++.++
T Consensus 239 ~~~~~~~~~d~~--s~sK~~~~-g~~~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~----~--~~~~~ 308 (395)
T 1vef_A 239 AFEHFGIVPDIL--TLAKALGG-GVPLGVAVM-REEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLE----R--TRLWE 308 (395)
T ss_dssp THHHHTCCCSEE--EECGGGGT-TSSCEEEEE-EHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHH----H--HTTHH
T ss_pred HhhhcCCCCCEE--EEcccccC-CCceEEEEe-hHHHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHH----h--CCHHH
Confidence 0 01122333 88999994 999999999 67777776553233456688888888888776431 1 35678
Q ss_pred HHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-HHHHHHHH-hhCeeeeCCCCCCCCCCeEE
Q 018172 250 LMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-EDCEKLLR-AERIMARGGRRFGADAKYAR 327 (360)
Q Consensus 250 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~-~~gI~~~pg~~f~~~~~~~R 327 (360)
+++++++++.+.|++++. .... ...+.++|+|+++++. ..+.+.|. ++||.++|+ .++++|
T Consensus 309 ~~~~~~~~l~~~l~~~~~-~~~~-----------~~~~~g~~~~~~~~~~~~~l~~~l~~~~gi~v~~~-----~~~~iR 371 (395)
T 1vef_A 309 RAAELGPWFMEKLRAIPS-PKIR-----------EVRGMGLMVGLELKEKAAPYIARLEKEHRVLALQA-----GPTVIR 371 (395)
T ss_dssp HHHHHHHHHHHHHHTSCC-TTEE-----------EEEEETTEEEEEESSCSHHHHHHHHHHHCEECEES-----STTEEE
T ss_pred HHHHHHHHHHHHHHHhhc-CceE-----------EEEEEEEEEEEEEcChHHHHHHHHHHHCCeEEecC-----CCCEEE
Confidence 888899999999988743 1100 0113345788888653 66667777 899999986 267999
Q ss_pred EEec--CChHHHHHHHHHHHHHH
Q 018172 328 VSML--SREEIFNIFLERLSAIQ 348 (360)
Q Consensus 328 ~s~~--~~~e~~~~~~~~l~~~~ 348 (360)
|+++ .+++++++++++|++++
T Consensus 372 i~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 372 FLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHHh
Confidence 9875 38999999999999876
No 147
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.94 E-value=2.1e-25 Score=209.16 Aligned_cols=281 Identities=14% Similarity=0.055 Sum_probs=201.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
.++|++++++++. +++++|+|+++++..++..+ +++||+ |+++.|+|..+...++..|++++.++.+
T Consensus 42 ~~l~~~la~~~~~--------~~~~~~~~gt~al~~~~~~~~~~~gd~----Vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 109 (393)
T 1mdo_A 42 QELEAAFCRLTGN--------QYAVAVSSATAGMHIALMALGIGEGDE----VITPSMTWVSTLNMIVLLGANPVMVDVD 109 (393)
T ss_dssp HHHHHHHHHHHCC--------SEEEEESCHHHHHHHHHHHTTCCTTCE----EEEESSSCHHHHHHHHHTTCEEEEECBC
T ss_pred HHHHHHHHHHhCC--------CcEEEecChHHHHHHHHHHcCCCCCCE----EEeCCCccHhHHHHHHHCCCEEEEEecc
Confidence 9999999999984 37999999999999999999 899998 9999999999999999999999999877
Q ss_pred cccc--cc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCC-ccEEEeccc
Q 018172 118 ANTF--DK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAAD-HDIMLFTLS 186 (360)
Q Consensus 118 ~~~~--~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~-~~i~~~S~s 186 (360)
.+++ +. ++++++|+++ ||||...+ +.+.++|+++|+++|+|++|+.+..... ...+ +++++.|+|
T Consensus 110 ~~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~~~~d~~~~S~~ 185 (393)
T 1mdo_A 110 RDTLMVTPEHIEAAITPQTKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKG-RHIGARGTAIFSFH 185 (393)
T ss_dssp TTTCCBCHHHHHHHCCTTEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETT-EETTSSSEEEEECC
T ss_pred CCcCCCCHHHHHHhcCCCceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECC-eecCCCCeEEEeCC
Confidence 5432 21 3578888865 48999887 6788889889999999999985421111 1122 789999999
Q ss_pred cccCCCCceEEEEeecCHHHHHHHHHHHhhcc------------------------ccCChHHHHHHHHHhcccCCCchh
Q 018172 187 KCTGHAGSRIGWALVKDTEVARKMTRFIELGS------------------------IGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 187 K~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~------------------------~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
|..+++|.|+||++++++++++.+........ ...+.+...++...+ .
T Consensus 186 k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l--------~ 257 (393)
T 1mdo_A 186 AIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQL--------Q 257 (393)
T ss_dssp TTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHH--------H
T ss_pred CCCccccccceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHH--------H
Confidence 43334456899999855889998876543211 012333322222222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc------hHHHHHHHHhhCeeeeCC
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE------DEDCEKLLRAERIMARGG 316 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~gI~~~pg 316 (360)
.+++..++.+++++++.+.|++++ +.+..+... .....+.++|+.+++ .+.+.+.|.++||.+++|
T Consensus 258 ~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~ 329 (393)
T 1mdo_A 258 KLDALNARRAAIAAQYHQAMADLP-FQPLSLPSW-------EHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLH 329 (393)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSS-------CEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC-cccccCCCC-------CCCceeEEEEEEecccccccCHHHHHHHHHhCCCCcccc
Confidence 345566666778888899998876 443321100 001223367888763 377888888999999997
Q ss_pred CCC--------------CC------CCCeEEEEecC--ChHHHHHHHHHHHHHHhch
Q 018172 317 RRF--------------GA------DAKYARVSMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 317 ~~f--------------~~------~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
..+ .. ..+++|+++.. ++|++++++++|++++...
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 386 (393)
T 1mdo_A 330 FRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQG 386 (393)
T ss_dssp CCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred cCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 643 11 13479999964 9999999999999988764
No 148
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.94 E-value=1.5e-26 Score=222.06 Aligned_cols=287 Identities=10% Similarity=0.024 Sum_probs=207.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH----HHHHhCCeeee-
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA----ETDYLRSGLYK- 113 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~----~~~~~g~~~~~- 113 (360)
.++++.++++++. ++++|++|+|+++++++++.+++++|+. +.+|+++.|+|++... .++..|++++.
T Consensus 114 ~~l~~~la~~~g~------~~~~v~~t~g~t~al~~~~~~~~~~~~~-~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~ 186 (465)
T 3e9k_A 114 ESIVGLMKDIVGA------NEKEIALMNALTVNLHLLMLSFFKPTPK-RYKILLEAKAFPSDHYAIESQLQLHGLNIEES 186 (465)
T ss_dssp HHHHGGGHHHHTC------CGGGEEECSCHHHHHHHHHHHHCCCCSS-SCEEEEETTCCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHcCC------CcCCEEEECCHHHHHHHHHHHhccccCC-CCEEEEcCCcCCchHHHHHHHHHHcCCcceee
Confidence 6788999999886 5579999999999999999999877653 3459999999998544 56667888632
Q ss_pred ---e-cCC------cccccc--C---CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCC
Q 018172 114 ---W-DGD------ANTFDK--N---NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAAD 177 (360)
Q Consensus 114 ---~-~~~------~~~~~~--~---~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~ 177 (360)
+ +.+ .+.+.. + +++++|++++||||||.+++ +.+.++|+++|+++|+|++|+.+..+......+
T Consensus 187 ~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~ 266 (465)
T 3e9k_A 187 MRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWG 266 (465)
T ss_dssp EEEECCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHT
T ss_pred eEEEecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcC
Confidence 2 322 222221 1 57999999999999999998 678888999999999999998655443333456
Q ss_pred ccEEEeccccccC-CCCceEEEEeecCHHHHHHHHHHHh-------------------------hccccCChHHHHHHHH
Q 018172 178 HDIMLFTLSKCTG-HAGSRIGWALVKDTEVARKMTRFIE-------------------------LGSIGVSKESQLRAAK 231 (360)
Q Consensus 178 ~~i~~~S~sK~~~-~~G~r~G~~~~~~~~~~~~l~~~~~-------------------------~~~~~~~~~~~~~~~~ 231 (360)
.+++++|++|.+. .|+ ++|++++ ++++.+.+..... +...+.+.....++.+
T Consensus 267 ~D~~~~s~~K~l~~gp~-~~g~l~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~a 344 (465)
T 3e9k_A 267 VDFACWCSYKYLNAGAG-GIAGAFI-HEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHA 344 (465)
T ss_dssp CCEEEECSSSTTCCCTT-CCCEEEE-CGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHH
T ss_pred CCEEEECcccccccCCC-ceEEEEE-cHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHH
Confidence 7899999999993 243 6899988 6776554431110 0111455566666666
Q ss_pred HhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhc----------CCcccCCCCCcccccccccCCCCCCcccccCCch-H
Q 018172 232 ILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQS----------GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-E 300 (360)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 300 (360)
+++.+.. ..+++++++++++++++.+.|+++ +++.+..|... ...++++++.++.. .
T Consensus 345 al~~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~---------~~~g~~~~~~~~~~~~ 412 (465)
T 3e9k_A 345 SLEIFKQ---ATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHV---------EERGCQLTITFSVPNK 412 (465)
T ss_dssp HHHHHHH---HCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSG---------GGBCSCEEEEECCTTC
T ss_pred HHHHHHH---cCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCH---------hhcccEEEEEecCCHH
Confidence 6664421 348899999999999999999885 45555544310 01244677777633 6
Q ss_pred HHHHHHHhhCeeeeCCCCCCCCCCeEEEEec-C--ChHHHHHHHHHHHHHHhch
Q 018172 301 DCEKLLRAERIMARGGRRFGADAKYARVSML-S--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 301 ~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~-~--~~e~~~~~~~~l~~~~~~~ 351 (360)
.+.+.|.++||.++. . .++++|+|+. . +++++++++++|++++++.
T Consensus 413 ~l~~~L~~~Gi~v~~----~-~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 413 DVFQELEKRGVVCDK----R-NPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSA 461 (465)
T ss_dssp CHHHHHHTTTEECEE----E-TTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHCCEEEec----C-CCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence 777888889999873 2 3679999972 3 8999999999999999764
No 149
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.94 E-value=3e-26 Score=215.48 Aligned_cols=273 Identities=11% Similarity=0.068 Sum_probs=195.3
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC------CC-CCCCceEEEeCCCCCCc-HHHHHHhCC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS------PG-GPEPISVVSAAPYYSQY-PAETDYLRS 109 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~------~g-d~~~~~vl~~~p~~~~~-~~~~~~~g~ 109 (360)
..++++.++++++ . +++++|+|+++++..++..+.. +| +. |++++|+|... ...+...|.
T Consensus 84 ~~~l~~~la~~~g-------~-~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~----vi~~~~~yh~~~~~~~~~~g~ 151 (397)
T 2ord_A 84 QMELAELLSKNTF-------G-GKVFFANTGTEANEAAIKIARKYGKKKSEKKYR----ILSAHNSFHGRTLGSLTATGQ 151 (397)
T ss_dssp HHHHHHHHHHTTT-------S-CEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCE----EEEEBTCCCCSSHHHHHHSBC
T ss_pred HHHHHHHHHHhcC-------C-CeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCce----EEEEcCCcCCCchhhhhccCC
Confidence 3777778877776 3 4899999999999999988863 44 55 99999999665 447777787
Q ss_pred e------------eeeecC-Ccccccc--CCCeeEEEEcCCCCCCcc-cch----HHHHHHhhhcCcEEEEeecccCCCC
Q 018172 110 G------------LYKWDG-DANTFDK--NNGAYIEVVNSPNNPDGT-IRE----AVLAKVNRSAEGKLIHDLAYYWPQY 169 (360)
Q Consensus 110 ~------------~~~~~~-~~~~~~~--~~~~~~i~~~~p~NPtG~-~~~----~~~~~~~~~~~~~li~D~ay~~~~~ 169 (360)
+ ++.++. |.+.++. ++++++|++++|+||||. +++ +.+.++|+++|+++|+||+|.+...
T Consensus 152 ~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~ 231 (397)
T 2ord_A 152 PKYQKPFEPLVPGFEYFEFNNVEDLRRKMSEDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGR 231 (397)
T ss_dssp HHHHGGGCSCCTTEEEECTTCHHHHHHHCCTTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTT
T ss_pred hhhccccCCCCCCeeEecCCCHHHHHHHhhcCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCcc
Confidence 6 666653 3344432 467999999999999999 666 4567788889999999999984221
Q ss_pred C--cCC-C--CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHH
Q 018172 170 T--PIT-G--AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFF 244 (360)
Q Consensus 170 ~--~~~-~--~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 244 (360)
. ... . ....+++ ||||.++ +|+|+||+++ +++++ .+.......+++.+++.|.++.++++.+..
T Consensus 232 ~g~~~~~~~~~~~~d~~--s~sK~~~-~G~r~G~~~~-~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~------ 300 (397)
T 2ord_A 232 TGKLFAYQKYGVVPDVL--TTAKGLG-GGVPIGAVIV-NERAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK------ 300 (397)
T ss_dssp TSSSSHHHHHTCCCSEE--EECGGGG-TTSCCEEEEE-CSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS------
T ss_pred CccchhhhhhCCCCCee--eeccccC-CCcCeEEEEE-chHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh------
Confidence 1 110 0 1112333 8899999 8999999999 55565 554323345667889999999888875432
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhhCeeeeCCCCCC
Q 018172 245 EYGRRLMSERWNMLRQVIRQSG-VFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERIMARGGRRFG 320 (360)
Q Consensus 245 ~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~pg~~f~ 320 (360)
++.+++++++++++.+.|++++ ++.... ...+.++|+|+++++ ...+.+.|.++||.+.||.
T Consensus 301 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-----------~~~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~--- 366 (397)
T 2ord_A 301 EGFLEEVEEKGNYLMKKLQEMKEEYDVVA-----------DVRGMGLMIGIQFREEVSNREVATKCFENKLLVVPAG--- 366 (397)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCTTEE-----------EEEEETTEEEEEECTTSCHHHHHHHHHHTTEECEEET---
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCceE-----------EEEEEeEEEEEEECChHHHHHHHHHHHHCCCEEccCC---
Confidence 3567788888888888887752 111100 001234467777764 3667777878999999963
Q ss_pred CCCCeEEEEec--CChHHHHHHHHHHHHHHh
Q 018172 321 ADAKYARVSML--SREEIFNIFLERLSAIQG 349 (360)
Q Consensus 321 ~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~ 349 (360)
++++|+++. .++|++++++++|+++++
T Consensus 367 --~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 367 --NNTIRFLPPLTVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp --TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred --CCEEEEECCcCCCHHHHHHHHHHHHHHHh
Confidence 579999954 499999999999999875
No 150
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.94 E-value=6.4e-26 Score=213.07 Aligned_cols=277 Identities=13% Similarity=0.073 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc-------CCCCCCCceEEEeCCCCCCcHHHHHHhC---
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS-------SPGGPEPISVVSAAPYYSQYPAETDYLR--- 108 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~-------~~gd~~~~~vl~~~p~~~~~~~~~~~~g--- 108 (360)
.++++.++++++ . ++|++|+|+++++..++..+. .+++. |++.+|+|..+...+...+
T Consensus 81 ~~l~~~la~~~~-------~-~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~----vi~~~~~yhg~~~~~~~~~~~~ 148 (395)
T 3nx3_A 81 AAAAKNLAKASA-------L-ERVFFTNSGTESIEGAMKTARKYAFNKGVKGGQ----FIAFKHSFHGRTLGALSLTANE 148 (395)
T ss_dssp HHHHHHHHHHHT-------C-SEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCE----EEEETTCCCCSSHHHHTTCCCH
T ss_pred HHHHHHHHHhcC-------C-CeEEEeCCHHHHHHHHHHHHHHHhhccCCCCCE----EEEEcCCcCCCCHHHHhhcCCc
Confidence 667777777665 3 589999999999999988775 34565 9999999988765544433
Q ss_pred ----------CeeeeecC-Ccccccc--CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCC
Q 018172 109 ----------SGLYKWDG-DANTFDK--NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYT 170 (360)
Q Consensus 109 ----------~~~~~~~~-~~~~~~~--~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~ 170 (360)
.++..++. |.+.++. ++++++|++..++|++|...+ +.+.++|+++|+++|+||+|.+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~ 228 (395)
T 3nx3_A 149 KYQKPFKPLISGVKFAKYNDISSVEKLVNEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRS 228 (395)
T ss_dssp HHHGGGCSCCSCEEEECTTCHHHHHTTCCTTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTT
T ss_pred ccccccCCCCCCcEEeCCCCHHHHHHhccCCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcC
Confidence 23444443 3333333 367889988888888888754 45678899999999999999843211
Q ss_pred c--C-CCCCCccEEEeccccccCCCCceEEEEeecCHHH-HHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHH
Q 018172 171 P--I-TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEV-ARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEY 246 (360)
Q Consensus 171 ~--~-~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 246 (360)
. . ....+....+.|+||.++ .|+|+||+++ ++++ ++.+.......+++.|++++.++.++++.+.+. .+.++
T Consensus 229 g~~~~~~~~~~~~d~~t~sK~~~-~G~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~--~~~~~ 304 (395)
T 3nx3_A 229 GKFFAYEHAQILPDIMTSAKALG-CGLSVGAFVI-NQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEE--KILEN 304 (395)
T ss_dssp SSSSGGGGGTCCCSEEEECGGGT-TTSCCEEEEE-CHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHT--THHHH
T ss_pred CcchhHHhcCCCCCEEEeccccc-CCCceEEEEE-chhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhh--HHHHH
Confidence 1 1 112222333568899999 5999999999 7888 888766554567788999999999888754322 55566
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhhCeeeeCCCCCCCCC
Q 018172 247 GRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERIMARGGRRFGADA 323 (360)
Q Consensus 247 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~pg~~f~~~~ 323 (360)
.++..+..++.+.+.+..++.+... .+.++|+|+.+++ ...+.+.|.++||.++|+. +
T Consensus 305 ~~~~~~~~~~~l~~~~~~~~~~~~~--------------~~~g~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-----~ 365 (395)
T 3nx3_A 305 VNKLTPYLEQSLDELINEFDFCKKR--------------KGLGFMQGLSLDKSVKVAKVIQKCQENALLLISCG-----E 365 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTEEEE--------------EEETTEEEEEECTTSCHHHHHHHHHHTTEECEEET-----T
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEE--------------EeEEEEEEEEeCCcchHHHHHHHHHHCCCEEecCC-----C
Confidence 6665555566666655555432221 1334477777765 2677788889999999863 6
Q ss_pred CeEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 324 KYARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 324 ~~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
+++||++.. ++|++++++++|++++++
T Consensus 366 ~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 366 NDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp TEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 799998543 999999999999998864
No 151
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.94 E-value=4.6e-25 Score=208.18 Aligned_cols=286 Identities=12% Similarity=0.072 Sum_probs=196.9
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH----HHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET----DYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~----~~~g~~~~~ 113 (360)
..++|++++++++. + ++++++|++++++.++.+++++||+ |+++.|.|.+....+ +..|++++.
T Consensus 84 ~~~le~~lA~l~g~-------~-~~i~~ssGt~Ai~~al~~l~~~Gd~----Vi~~~~~y~~~~~~~~~~l~~~G~~v~~ 151 (415)
T 2fq6_A 84 HFSLQQAMCELEGG-------A-GCVLFPCGAAAVANSILAFIEQGDH----VLMTNTAYEPSQDFCSKILSKLGVTTSW 151 (415)
T ss_dssp HHHHHHHHHHHHTC-------S-EEEEESSHHHHHHHHHHTTCCTTCE----EEEETTSCHHHHHHHHHTGGGGTCEEEE
T ss_pred HHHHHHHHHHHhCC-------C-eEEEeCCHHHHHHHHHHHHhCCCCE----EEEeCCCchHHHHHHHHHHHHcCcEEEE
Confidence 37899999999984 3 4667788899999999999999998 999999999887654 456999998
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhh--cCcEEEEeecccCCC-CCcCCCCCCccEEEeccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRS--AEGKLIHDLAYYWPQ-YTPITGAADHDIMLFTLS 186 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~--~~~~li~D~ay~~~~-~~~~~~~~~~~i~~~S~s 186 (360)
++.+ .+.++. +++|++|++++|+||||.+++ +.+.++|++ +|+++|+|++|..+. ..++ ..+.+++++|+|
T Consensus 152 v~~~d~~~le~ai~~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~--~~g~Div~~S~s 229 (415)
T 2fq6_A 152 FDPLIGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKAL--DFGIDVSIQAAT 229 (415)
T ss_dssp ECTTCGGGGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGG--GGTCSEEEEETT
T ss_pred ECCCCHHHHHHhhccCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCcc--ccCCeEEEEeCc
Confidence 8753 455544 567999999999999999998 788899999 999999999998542 1222 356789999999
Q ss_pred cccCCCCce-EEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhc
Q 018172 187 KCTGHAGSR-IGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQS 265 (360)
Q Consensus 187 K~~~~~G~r-~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 265 (360)
|.++.+|.+ +||+++ ++++++.+.......+...++....++...+ +.+....++..++.+.+.+.|.++
T Consensus 230 K~lg~~g~~~~G~l~~-~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l--------~~l~~r~~~~~~n~~~l~~~L~~~ 300 (415)
T 2fq6_A 230 KYLVGHSDAMIGTAVC-NARCWEQLRENAYLMGQMVDADTAYITSRGL--------RTLGVRLRQHHESSLKVAEWLAEH 300 (415)
T ss_dssp TTTTCSSSCCCEEEEE-CTTTHHHHHHHHHHTTCCCCHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cccCCCCCceEEEEEe-CHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh--------hHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999988765 589888 6678888876655434444554444333333 334445555677778888888887
Q ss_pred CCcccCCCCCcc----cccccccCCCCCCcccccCCc---hHHHHHHHHhh---CeeeeCCCC-----------------
Q 018172 266 GVFGLPEYPLEY----CNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAE---RIMARGGRR----------------- 318 (360)
Q Consensus 266 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~---gI~~~pg~~----------------- 318 (360)
+.+.....++.. +........+.+..+++.+++ .+.....+.+- ++.+..|+.
T Consensus 301 ~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~ 380 (415)
T 2fq6_A 301 PQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRP 380 (415)
T ss_dssp TTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCT
T ss_pred CCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccc
Confidence 543322111100 000000012345677888876 34455555444 344444421
Q ss_pred ---CCCCCCeEEEEecC--ChHHHHHHHHHHHH
Q 018172 319 ---FGADAKYARVSMLS--REEIFNIFLERLSA 346 (360)
Q Consensus 319 ---f~~~~~~~R~s~~~--~~e~~~~~~~~l~~ 346 (360)
.+..++.+|||++. ++++++.+.++|++
T Consensus 381 ~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 381 QGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp TCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred hhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 33345799999977 56667777776653
No 152
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.94 E-value=3.5e-25 Score=210.12 Aligned_cols=286 Identities=18% Similarity=0.101 Sum_probs=202.0
Q ss_pred cccC-CCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 26 YLSD-MGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 26 ~y~~-~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
.|++ ..+. .++|++++++++. +++++|+|+++++..++..+. +||+ |+++.|+|..+...+
T Consensus 46 ~y~~~~~~~-----~~l~~~la~~~~~--------~~v~~~~ggt~al~~~l~~l~-~gd~----Vlv~~~~~~~~~~~~ 107 (424)
T 2po3_A 46 WLSNGGPLV-----REFEERVAGLAGV--------RHAVATCNATAGLQLLAHAAG-LTGE----VIMPSMTFAATPHAL 107 (424)
T ss_dssp CCSSSCHHH-----HHHHHHHHHHHTS--------SEEEEESCHHHHHHHHHHHHT-CCSE----EEEESSSCTHHHHHH
T ss_pred CcccCCHHH-----HHHHHHHHHHhCC--------CeEEEeCCHHHHHHHHHHHcC-CCCE----EEECCCccHHHHHHH
Confidence 4665 5665 9999999999984 489999999999999999985 6777 999999999999999
Q ss_pred HHhCCeeeeecCCccccc-------c--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC-C--Cc
Q 018172 105 DYLRSGLYKWDGDANTFD-------K--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ-Y--TP 171 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~~~~-------~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~-~--~~ 171 (360)
...|++++.++.+.+++. . ++++++|+++ ||||...+ +.+.++|+++|+++|+|++|..+. + .+
T Consensus 108 ~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~---~~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~~ 184 (424)
T 2po3_A 108 RWIGLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGV---HLWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGRP 184 (424)
T ss_dssp HHTTCEEEEECBCTTTSSBCHHHHGGGCCTTEEEEEEE---CGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEE
T ss_pred HHcCCEEEEEecCCCcCCcCHHHHHHhhCcCCcEEEEE---CCCCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCee
Confidence 999999999987653221 1 3578998875 48999877 678888888999999999998422 1 11
Q ss_pred CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhcccc---------CChHHHHHHHHHhcccCCCchh
Q 018172 172 ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIG---------VSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 172 ~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
+ ... .++++.||||..+++|.|+||++++++++++.+.........+ ...+.+.+++.++.. ..
T Consensus 185 ~-~~~-~di~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~-----~~ 257 (424)
T 2po3_A 185 A-GSL-GDAEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTS-----LD 257 (424)
T ss_dssp T-TSS-SSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHH-----HH
T ss_pred c-ccc-cCEEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHH-----HH
Confidence 1 111 2499999996666677899999994489999888765432111 001223333333331 15
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCCcccccccccCCCCCCcccccCCc------hHHHHHHHHhhCeeeeC
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSGVFGLPE-YPLEYCNFTGKFTNSHPGFAWLESKE------DEDCEKLLRAERIMARG 315 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~gI~~~p 315 (360)
.+++..++.+++++++.+.|++++++.+.. +.++...| .++++.+++ .+.+.+.|.++||.+++
T Consensus 258 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~---------~~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~ 328 (424)
T 2po3_A 258 AFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNH---------QYVIVEIDEATTGIHRDLVMEVLKAEGVHTRA 328 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCC---------CCEEEEECHHHHSSCHHHHHHHHHHTTEECBC
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcccc---------EEEEEEECCccchhhHHHHHHHHHHCCCceec
Confidence 566777778888888888888776665544 33322111 123355552 36778888999999987
Q ss_pred CCCCCC---------------CCCe-------EEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 316 GRRFGA---------------DAKY-------ARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 316 g~~f~~---------------~~~~-------~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
. |.. .++. +|+++.. ++|++++++++|.+++++
T Consensus 329 ~--~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~ 385 (424)
T 2po3_A 329 Y--FSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCATR 385 (424)
T ss_dssp T--TCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHHH
T ss_pred c--cCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 2 210 0122 6666323 899999999999998864
No 153
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.94 E-value=1.1e-25 Score=208.24 Aligned_cols=284 Identities=10% Similarity=-0.029 Sum_probs=194.0
Q ss_pred ccCCCCccccccHHHHHHHHHHHhh-cCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH--H
Q 018172 27 LSDMGNVCWFLVPELAEAINNLHHV-VDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA--E 103 (360)
Q Consensus 27 y~~~~g~~~~~~~~lr~~la~~~~~-~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~--~ 103 (360)
|....|. .++++++++++.. .| . ++++|++|+|+++++..++..+.++||+ |++++|+|..+.. .
T Consensus 41 ~~~~~g~-----~~~~~~~~~~l~~~~g--~-~~~~v~~~~g~t~a~~~~~~~~~~~gd~----vl~~~~~~~~~~~~~~ 108 (359)
T 1svv_A 41 QHAGYGQ-----DSHCAKAARLIGELLE--R-PDADVHFISGGTQTNLIACSLALRPWEA----VIATQLGHISTHETGA 108 (359)
T ss_dssp CCCSTTC-----SHHHHHHHHHHHHHHT--C-TTSEEEEESCHHHHHHHHHHHHCCTTEE----EEEETTSHHHHSSTTH
T ss_pred ccccccc-----cHHHHHHHHHHHHHhC--C-CCccEEEeCCchHHHHHHHHHHhCCCCE----EEEcccchHHHHHHHH
Confidence 5555554 5555555554322 12 1 4568999999999999999999999988 9999999999887 4
Q ss_pred HHHhCCeeeeecCCcccccc-------CC-------CeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeeccc
Q 018172 104 TDYLRSGLYKWDGDANTFDK-------NN-------GAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYY 165 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~~~~-------~~-------~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~ 165 (360)
++..|.+++.++.+...++. ++ ++++|++++| ||||.+++ +.+.++|+++|+++|+|++|.
T Consensus 109 ~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 187 (359)
T 1svv_A 109 IEATGHKVVTAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARL 187 (359)
T ss_dssp HHHTTCCEEEECCTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTH
T ss_pred HhcCCCeeEEEeCCCCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccch
Confidence 78889999999876322221 12 3899999999 79999987 346678888999999999993
Q ss_pred C---CCCCcCCCC----CCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccc--cCChHHHHHHHHHhccc
Q 018172 166 W---PQYTPITGA----ADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSI--GVSKESQLRAAKILGIV 236 (360)
Q Consensus 166 ~---~~~~~~~~~----~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~ 236 (360)
+ +........ ...++++.|++|..+ ..++|+++. ++++++.+......... +.+.....++.++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~--~~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-- 262 (359)
T 1svv_A 188 ASALSSPVNDLTLADIARLTDMFYIGATKAGG--MFGEALIIL-NDALKPNARHLIKQRGALMAKGWLLGIQFEVLMK-- 262 (359)
T ss_dssp HHHHTSTTCCCCHHHHHHHCSEEEEECTTTTC--SSCEEEEEC-SGGGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTS--
T ss_pred hhhhcCCCcchhhhhhhhcCCEEEEecccCCC--CCceEEEEE-cccHHHHHHHHHhcCCcccccchhhHHHHHHHHh--
Confidence 2 222111110 234688899999754 345899988 78887777654321211 222223333333343
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchHHHHHHHHhh-CeeeeC
Q 018172 237 SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAE-RIMARG 315 (360)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gI~~~p 315 (360)
. ..+++.+++++++++++.+.| +.+++.+..+.++ +|+|++++ ..+.+.|.++ ||.+.+
T Consensus 263 -~---~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~-------------~~~~~~~~--~~~~~~l~~~~gi~v~~ 322 (359)
T 1svv_A 263 -D---NLFFELGAHSNKMAAILKAGL-EACGIRLAWPSAS-------------NQLFPILE--NTMIAELNNDFDMYTVE 322 (359)
T ss_dssp -T---THHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSS-------------SEECBEEE--HHHHHHHTTTEECEEEE
T ss_pred -h---hhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCcc-------------ceEEEEcC--HHHHHHHHHhcCEEEEe
Confidence 2 456788999999999999999 5556665544433 36777665 4556666677 999832
Q ss_pred CCCCCCCCCeEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 316 GRRFGADAKYARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 316 g~~f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
.. ...++++|++++. +++++++++++|++++++
T Consensus 323 ~~--~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 323 PL--KDGTCIMRLCTSWATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp EE--TTTEEEEEEECCTTCCHHHHHHHHHHHHHC---
T ss_pred cc--cCCCceEEEEccCcCCHHHHHHHHHHHHHHHhc
Confidence 11 1235689998753 899999999999988754
No 154
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.94 E-value=6.9e-25 Score=204.22 Aligned_cols=281 Identities=13% Similarity=0.022 Sum_probs=200.6
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh---cCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL---SSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKW 114 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l---~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~ 114 (360)
..++|++++++++. + ++++|+|+++++..++..+ +++||+ |+++.|+|..+...+...|++++.+
T Consensus 34 ~~~l~~~la~~~~~-------~-~v~~~~ggt~al~~~~~~~~~~~~~gd~----Vl~~~~~~~~~~~~~~~~g~~~~~~ 101 (375)
T 2fnu_A 34 SLLFEEALCEFLGV-------K-HALVFNSATSALLTLYRNFSEFSADRNE----IITTPISFVATANMLLESGYTPVFA 101 (375)
T ss_dssp HHHHHHHHHHHHTC-------S-EEEEESCHHHHHHHHHHHSSCCCTTSCE----EEECSSSCTHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHhCC-------C-eEEEeCCHHHHHHHHHHHhcccCCCCCE----EEECCCccHhHHHHHHHCCCEEEEe
Confidence 39999999999985 2 8999999999999999999 888988 9999999999999999999999988
Q ss_pred cCCcc------cccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcC--CCCCCccEEEe
Q 018172 115 DGDAN------TFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPI--TGAADHDIMLF 183 (360)
Q Consensus 115 ~~~~~------~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~--~~~~~~~i~~~ 183 (360)
+.+.+ .+.. ++++++|++++| ||.+.+ +.+.++|+++|+++|+|++|..+..... .+..+ ++.+.
T Consensus 102 ~~~~~~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~i~~~ 177 (375)
T 2fnu_A 102 GIKNDGNIDELALEKLINERTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFA-LASVF 177 (375)
T ss_dssp CBCTTSSBCGGGSGGGCCTTEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSS-SEEEE
T ss_pred ccCCCCCCCHHHHHhhcCcCceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeECCeeccccC-CeEEE
Confidence 87543 2222 357888887766 999988 7788889889999999999986533211 12222 57888
Q ss_pred ccc--cccCCCCceEEEEee-cCHHHHHHHHHHHhhcc------------ccCC-hHHHHHHHHHhcccCCCchhHHHHH
Q 018172 184 TLS--KCTGHAGSRIGWALV-KDTEVARKMTRFIELGS------------IGVS-KESQLRAAKILGIVSDDYPNFFEYG 247 (360)
Q Consensus 184 S~s--K~~~~~G~r~G~~~~-~~~~~~~~l~~~~~~~~------------~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (360)
|+| |.+++ | +|++++ +++++++.+........ .+.+ ...+..++..+.. ...+++.
T Consensus 178 s~s~~K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~-----~~~~~~~ 249 (375)
T 2fnu_A 178 SFHAIKPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQ-----LKKAPFL 249 (375)
T ss_dssp ECCTTSSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHH-----HTTHHHH
T ss_pred eCCCCCCccc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHH-----HHHHHHH
Confidence 888 99984 6 677776 35888888877653221 1111 1222222222221 1456788
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCC-CcccccccccCCCCCCcccccCC-----chHHHHHHHHhhCeeeeCC----C
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLPEYP-LEYCNFTGKFTNSHPGFAWLESK-----EDEDCEKLLRAERIMARGG----R 317 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gI~~~pg----~ 317 (360)
.++++++++++.+.|++++++.+..+. +.. ....++++.++ +...+.+.|.++||.++.+ .
T Consensus 250 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~p~~ 320 (375)
T 2fnu_A 250 MQKREEAALTYDRIFKDNPYFTPLHPLLKDK---------SSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIY 320 (375)
T ss_dssp HHHHHHHHHHHHHHHTTCSSEEESGGGCSSC---------CCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGG
T ss_pred HHHHHHHHHHHHHHhhcCCCccccCCCCCCC---------cceEEEEEEeCccccchHHHHHHHHHHCCCCccccccccc
Confidence 888999999999999998666554331 100 11123455555 2367778888999999832 1
Q ss_pred ---CCC-------C------CCCeEEEEecC--ChHHHHHHHHHHHHHHhch
Q 018172 318 ---RFG-------A------DAKYARVSMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 318 ---~f~-------~------~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
.|+ . ..+++|+++.. ++|++++++++|++++++.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 321 QYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp GSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 111 0 02689999975 8999999999999998653
No 155
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.94 E-value=2.2e-25 Score=216.65 Aligned_cols=284 Identities=10% Similarity=0.027 Sum_probs=202.0
Q ss_pred HHHHHHH----HHHHhhcCCCCCCCCcE--EEcCChHHHHHHHHHhhcCCC--------CCCCceEEEeCCCCCCcHHHH
Q 018172 39 PELAEAI----NNLHHVVDNAVSDGRHI--VIGTGSTQLYQAALYALSSPG--------GPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 39 ~~lr~~l----a~~~~~~~~~~~~~~~i--~~t~G~t~~l~~~~~~l~~~g--------d~~~~~vl~~~p~~~~~~~~~ 104 (360)
.++++.+ +++++. +.++ +++ ++|+|+++++..++..+.++| |+ |+++.|+|..+...+
T Consensus 138 ~~le~~l~~~la~~~g~---~~~~-~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~----Vi~~~~~~~~~~~~~ 209 (514)
T 3mad_A 138 AKFEAEVVAMTAHMLGG---DAAG-GTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPE----AVVPVSAHAAFDKAA 209 (514)
T ss_dssp HHHHHHHHHHHHHHTTG---GGGT-SCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCE----EEEETTSCTHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC---CCcc-CCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCe----EEEeCccchHHHHHH
Confidence 4555555 444443 2211 367 999999999999999998766 66 999999999999999
Q ss_pred HHhCCeeeeecCCcc------cccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC------
Q 018172 105 DYLRSGLYKWDGDAN------TFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY------ 169 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~------~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~------ 169 (360)
+..|++++.++.+.+ .++. ++++++|++++|+||||.+.+ +.+.++|+++|+++|+|++|++...
T Consensus 210 ~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~ 289 (514)
T 3mad_A 210 QYFGIKLVRTPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERL 289 (514)
T ss_dssp HHHTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHT
T ss_pred HHcCCeeEEeeeCCCCCCCHHHHHHHhccCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhc
Confidence 999999999987642 2221 468999999999999999988 7788899999999999999985321
Q ss_pred ----CcC-CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhh----------ccccCChHHHHHHHHHhc
Q 018172 170 ----TPI-TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIEL----------GSIGVSKESQLRAAKILG 234 (360)
Q Consensus 170 ----~~~-~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~----------~~~~~~~~~~~~~~~~l~ 234 (360)
+++ ....+.++++.|++|.++ .|.++|+++++++.+.+........ ...+.+.....++.+++.
T Consensus 290 g~~~~~~~~~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~ 368 (514)
T 3mad_A 290 GYPVPPFDFRLEGVTSVSADTHKYGY-GAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAML 368 (514)
T ss_dssp TCCCCCCSTTSTTCCEEEECTTTTTC-CCSSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHH
T ss_pred CCCCCcccccCCCCcEEEECchhccC-CCCCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHH
Confidence 122 134566899999999865 6788999998555443321100000 011223332333333343
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCee
Q 018172 235 IVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIM 312 (360)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~ 312 (360)
.+. ...+++..++++++++++.+.|++++++.+..+.. +++++..++ ...+.+.|.++||.
T Consensus 369 ~l~---~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~--------------~~~~~~~~~~~~~~l~~~L~~~Gi~ 431 (514)
T 3mad_A 369 SLG---EEGYLDATRRILQAADRLKAGVRAIPSLKILGDPL--------------WVIAVASDELNIYQVMEEMAGRGWR 431 (514)
T ss_dssp HHH---HHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCS--------------SEEEEECSSSCHHHHHHHHHTTTCB
T ss_pred HHh---HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCe--------------EEEEEeCCCCCHHHHHHHHHhcCCE
Confidence 322 26678889999999999999999987666554332 145565543 27788888899998
Q ss_pred eeCCCCCCCCCCeEEEEecC---ChHHHHHHHHHHHHHHhchh
Q 018172 313 ARGGRRFGADAKYARVSMLS---REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 313 ~~pg~~f~~~~~~~R~s~~~---~~e~~~~~~~~l~~~~~~~~ 352 (360)
+ +|..| ++++|+++.. ++|++++++++|++++++.+
T Consensus 432 v-~g~~~---~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~ 470 (514)
T 3mad_A 432 L-NGLHR---PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVR 470 (514)
T ss_dssp C-EEETT---TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHH
T ss_pred e-ccCCC---CCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 8 54433 4589999863 67999999999999997654
No 156
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.94 E-value=1.3e-25 Score=208.03 Aligned_cols=284 Identities=10% Similarity=-0.020 Sum_probs=190.3
Q ss_pred cccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH---H
Q 018172 26 YLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP---A 102 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~---~ 102 (360)
.|.+..+. .+||++++++++. +.. ++++|+++++..++..++++||.+ .|+++.+.|.... .
T Consensus 43 ~~~~~~~~-----~~l~~~la~~~~~-------~~~-i~~~~g~~a~~~a~~~~~~~g~~~--vvi~~~~~~~~~~~~~~ 107 (359)
T 3pj0_A 43 IYGNGAVI-----EDFETKIAKILGK-------QSA-VFFPSGTMAQQIALRIWADRKENR--RVAYHPLSHLEIHEQDG 107 (359)
T ss_dssp BTTBSHHH-----HHHHHHHHHHHTC-------SEE-EEESCHHHHHHHHHHHHHHHHTCC--EEEECTTCHHHHSSTTH
T ss_pred cccCCHHH-----HHHHHHHHHHhCC-------CcE-EEeCCHHHHHHHHHHHHHhcCCCc--EEEEeccceeeehhcch
Confidence 45555555 9999999999984 334 455777899999999998887741 1444545443322 2
Q ss_pred HHHHhCCeeeeecCCcccccc------CCCeeEEEEcCCCCCC-cccch-H---HHHHHhhhcCcEEEEeecccCCC---
Q 018172 103 ETDYLRSGLYKWDGDANTFDK------NNGAYIEVVNSPNNPD-GTIRE-A---VLAKVNRSAEGKLIHDLAYYWPQ--- 168 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~~~~~~------~~~~~~i~~~~p~NPt-G~~~~-~---~~~~~~~~~~~~li~D~ay~~~~--- 168 (360)
.....|.+++.++.+...++. .+++++|++++||||| |.+++ + .+.++|+++|+++|+|++|....
T Consensus 108 ~~~~~g~~~~~v~~~~~~~d~~~l~~~~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~ 187 (359)
T 3pj0_A 108 LKELQQITPLLLGTANQLLTIDDIKSLREPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPF 187 (359)
T ss_dssp HHHHHCCEEEECSCTTSCCCHHHHHTCSSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHH
T ss_pred HHHhcCceEEecCCcCCCcCHHHHHhccCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhh
Confidence 235579999988764322221 4678999999999998 68887 3 34778888999999999986321
Q ss_pred --CCcCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCC--hHHHHHHHHHhcccCCCchhHH
Q 018172 169 --YTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVS--KESQLRAAKILGIVSDDYPNFF 244 (360)
Q Consensus 169 --~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~ 244 (360)
.....-....++++.|+||.++.++ + ||++. ++++++.+...+...+.+.+ ...+.++...++ ...
T Consensus 188 ~~~~~~~~~~~~d~~~~s~sK~~~~~~-g-g~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~-------~~~ 257 (359)
T 3pj0_A 188 YQKSAEEICALFDSVYVSFYKGIGGIA-G-AILAG-NDDFVQEAKIWKRRYGGDLISLYPYILSADYYFE-------KRI 257 (359)
T ss_dssp HTCCHHHHHTTCSEEEEESSSTTCCSS-C-EEEEE-CHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHH-------HHG
T ss_pred hCCCHHHhhccCCEEEEeccccCCCcc-e-EEEEC-CHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHH-------HHH
Confidence 1110001234567789999887553 2 77777 89999999876543333332 233333333333 223
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccC-CCCCcccccccccCCCCCCcccccCCc-----hHHHHHHHHhhCeeeeCCCC
Q 018172 245 EYGRRLMSERWNMLRQVIRQSGVFGLP-EYPLEYCNFTGKFTNSHPGFAWLESKE-----DEDCEKLLRAERIMARGGRR 318 (360)
Q Consensus 245 ~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~gI~~~pg~~ 318 (360)
+. .+++.++++++.+.|++++++.+. .+. .++|+|++++. .+.+.+.|.++||.++||..
T Consensus 258 ~~-~~~~~~~~~~l~~~L~~~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~ 323 (359)
T 3pj0_A 258 GK-MAEYFEAAKGLAERFNSCSGVKTVPEVP-------------VSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQ 323 (359)
T ss_dssp GG-HHHHHHHHHHHHHHHHTSTTEEEESSSC-------------SSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCE
T ss_pred HH-hHHHHHHHHHHHHHHhhCCCceeeccCC-------------cceEEEEEecCccchhHHHHHHHHHhcCcEecCCcc
Confidence 33 334678888999999998766652 333 23366666542 26788889999999999987
Q ss_pred CCC-CCCeEEEEec-----CChHHHHHHHHHHHHHH
Q 018172 319 FGA-DAKYARVSML-----SREEIFNIFLERLSAIQ 348 (360)
Q Consensus 319 f~~-~~~~~R~s~~-----~~~e~~~~~~~~l~~~~ 348 (360)
|+. ..+++|+++. .+.|++++++++|.+.+
T Consensus 324 ~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~l 359 (359)
T 3pj0_A 324 EKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKEL 359 (359)
T ss_dssp EEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred ccCCCceEEEEEecCccccCCHHHHHHHHHHHHhcC
Confidence 753 3568999885 37899999999988753
No 157
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.94 E-value=3.2e-25 Score=208.69 Aligned_cols=278 Identities=14% Similarity=0.106 Sum_probs=194.3
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH-H--HHHhC--Ceeeeec
Q 018172 41 LAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA-E--TDYLR--SGLYKWD 115 (360)
Q Consensus 41 lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~-~--~~~~g--~~~~~~~ 115 (360)
+|+.++++++. +.+.+++++| ++++..++..++++||. |+++.|+|+.+.. . +...| .+++.++
T Consensus 74 ~r~~la~~~g~------~~~~i~~~sG-t~a~~~a~~~~~~~gd~----Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 142 (405)
T 2vi8_A 74 ARERAKQLFGA------EHANVQPHSG-AQANMAVYFTVLEHGDT----VLGMNLSHGGHLTHGSPVNFSGVQYNFVAYG 142 (405)
T ss_dssp HHHHHHHHHTC------SEEECCCSSH-HHHHHHHHHHHCCTTCE----EEEECGGGTCCTTTTCTTSHHHHHSEEEEEC
T ss_pred HHHHHHHHhCC------CceEEEecCc-HHHHHHHHHHhcCCCCE----EEEecccccchhcccchhhhccceeEEEecc
Confidence 34688888875 3333445666 99999999999999998 9999999998854 2 12334 4777776
Q ss_pred CCccc-------ccc--CC-CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCC----CCCcCCCCCCccE
Q 018172 116 GDANT-------FDK--NN-GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWP----QYTPITGAADHDI 180 (360)
Q Consensus 116 ~~~~~-------~~~--~~-~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~----~~~~~~~~~~~~i 180 (360)
++.+. +.. ++ ++++|++ +|+|+ |...+ +.+.++|+++|+++|+|++|..+ ..... .....++
T Consensus 143 ~~~~~~~~d~~~l~~~i~~~~~~~v~~-~~~~~-~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~-~~~~~di 219 (405)
T 2vi8_A 143 VDPETHVIDYDDVREKARLHRPKLIVA-AAAAY-PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPN-PVPYAHF 219 (405)
T ss_dssp BCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSC-CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCC-STTTCSE
T ss_pred cccccCCcCHHHHHHHHHhcCCeEEEE-eCCCC-CccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCC-ccccCCE
Confidence 54221 211 22 6788887 44443 34433 67788888899999999999831 11111 1124568
Q ss_pred EEeccccccC-CCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHH-HHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 181 MLFTLSKCTG-HAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRA-AKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 181 ~~~S~sK~~~-~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
+++|+||.++ ++| ||+++ ++++++.+.........+.+.+.+.++ .++++.... .++++.+++++++++++
T Consensus 220 ~~~s~sK~~~g~~g---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~---~~~~~~~~~~~~~~~~l 292 (405)
T 2vi8_A 220 VTTTTHKTLRGPRG---GMILC-QEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQ---DDFKAYAKRVVDNAKRL 292 (405)
T ss_dssp EEEESSSTTCCCSC---EEEEE-CHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHS---HHHHHHHHHHHHHHHHH
T ss_pred EEEeccccCCCCCC---eEEEE-cHHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHH
Confidence 9999999997 666 99998 789999888765444444433444443 456653322 67889999999999999
Q ss_pred HHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHHhhCeeeeCCCC----CCC-CCCeEEEE
Q 018172 259 RQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLRAERIMARGGRR----FGA-DAKYARVS 329 (360)
Q Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gI~~~pg~~----f~~-~~~~~R~s 329 (360)
.+.|+++ ++.+..+. +.++++|+.++. ...+.+.|.++||.++||.. ++. .++++|+|
T Consensus 293 ~~~L~~~-g~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis 359 (405)
T 2vi8_A 293 ASALQNE-GFTLVSGG------------TDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIG 359 (405)
T ss_dssp HHHHHHT-TCEEGGGS------------CSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEE
T ss_pred HHHHHhC-CCeEecCC------------CCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEe
Confidence 9999988 45544332 123467887763 36677888899999999862 322 35689999
Q ss_pred ecC------ChHHHHHHHHHHHHHHhchh
Q 018172 330 MLS------REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 330 ~~~------~~e~~~~~~~~l~~~~~~~~ 352 (360)
+.. +++++++++++|++++.+..
T Consensus 360 ~~~~~~~~~~~~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 360 TAAVTTRGFGLEEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp CHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred eeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence 973 79999999999999997653
No 158
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.94 E-value=9.1e-26 Score=214.65 Aligned_cols=279 Identities=13% Similarity=0.001 Sum_probs=184.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc--CCCCCCCceEEEeCCCCCCcHHHHHHh---------
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS--SPGGPEPISVVSAAPYYSQYPAETDYL--------- 107 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~--~~gd~~~~~vl~~~p~~~~~~~~~~~~--------- 107 (360)
.++++.++++++. ..++|++|+|+++++..++..+. ..++. |++.+|+|+.....+...
T Consensus 88 ~~l~~~la~~~~~------~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~----vi~~~~~yhg~~~~~~~~~~~~~~~~~ 157 (433)
T 1zod_A 88 VDLATRLANITPP------GLDRALLLSTGAESNEAAIRMAKLVTGKYE----IVGFAQSWHGMTGAAASATYSAGRKGV 157 (433)
T ss_dssp HHHHHHHHHHSCT------TCCEEEEESCHHHHHHHHHHHHHHHHTCCE----EEEETTCCCCSSHHHHHTCCSSCCSSS
T ss_pred HHHHHHHHHhCCC------CcCEEEEeCchHHHHHHHHHHHHHhhCCCe----EEEECCCcCCCChhHHhhcCCcccccc
Confidence 6777777777653 34689999999999999988653 23455 999999998765543322
Q ss_pred -----CCeeeeecC----------------Ccccccc--C----CCeeEEEEcCCCCCCcccch-----HHHHHHhhhcC
Q 018172 108 -----RSGLYKWDG----------------DANTFDK--N----NGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAE 155 (360)
Q Consensus 108 -----g~~~~~~~~----------------~~~~~~~--~----~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~ 155 (360)
|...+.++. |.+.++. + +++++|+++..+||||..++ +.+.++|+++|
T Consensus 158 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~ 237 (433)
T 1zod_A 158 GPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARG 237 (433)
T ss_dssp CCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHT
T ss_pred CCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhC
Confidence 333333321 1122211 1 34556555433588997543 46778899999
Q ss_pred cEEEEeecccCCCC-CcC-C-CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhh--ccccCChHHHHHHH
Q 018172 156 GKLIHDLAYYWPQY-TPI-T-GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIEL--GSIGVSKESQLRAA 230 (360)
Q Consensus 156 ~~li~D~ay~~~~~-~~~-~-~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~ 230 (360)
+++|+||+|.+... ... . ...+....+.||||.++ .|+|+||+++ ++++++.+...... .+++.|+++|.++.
T Consensus 238 ~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~sK~~~-~G~~ig~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~ 315 (433)
T 1zod_A 238 MLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLG-AGLPLAAIVT-SAAIEERAHELGYLFYTTHVSDPLPAAVGL 315 (433)
T ss_dssp CEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHH-TTSSCEEEEE-CHHHHHHHHHTTCCCCCTTTTCHHHHHHHH
T ss_pred CEEEEeccccCCCcCchHhHHhhcCCCCCEEEeccccc-CCCCeeEEEE-hHHHHHhhccCCCCCCCCCCcCHHHHHHHH
Confidence 99999999984321 111 1 11111222458999999 5999999999 78999988763322 56778999999888
Q ss_pred HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhc----CCcccCCCCCcccccccccCCCCCCcccccCCc--------
Q 018172 231 KILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQS----GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-------- 298 (360)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 298 (360)
++++.+.+ +...++++++++++.+.|+++ +.+... ++.++|+|+++++
T Consensus 316 aal~~~~~------~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~--------------~~~g~~~~i~~~~~~~~~~~~ 375 (433)
T 1zod_A 316 RVLDVVQR------DGLVARANVMGDRLRRGLLDLMERFDCIGDV--------------RGRGLLLGVEIVKDRRTKEPA 375 (433)
T ss_dssp HHHHHHHH------TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE--------------EEETTEEEEEEEEETTTTEEC
T ss_pred HHHHHHHh------CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE--------------EEEEEEEEEEEecCccccCCC
Confidence 88874432 124455666666666666553 322111 1234466666542
Q ss_pred ---hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec--CChHHHHHHHHHHHHHHhc
Q 018172 299 ---DEDCEKLLRAERIMARGGRRFGADAKYARVSML--SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 299 ---~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~ 350 (360)
...+.+.|.++||.+.||..|+ .++++||+++ .+++++++++++|++++.+
T Consensus 376 ~~~~~~~~~~l~~~Gv~v~~~~~~~-~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~ 431 (433)
T 1zod_A 376 DGLGAKITRECMNLGLSMNIVQLPG-MGGVFRIAPPLTVSEDEIDLGLSLLGQAIER 431 (433)
T ss_dssp TTHHHHHHHHHHHTTEECCEECCTT-SCCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCeEeccCCCC-CCCEEEEECCcCCCHHHHHHHHHHHHHHHHH
Confidence 2556677778999999988776 3579999764 4999999999999998764
No 159
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.94 E-value=1.6e-25 Score=212.79 Aligned_cols=279 Identities=10% Similarity=-0.002 Sum_probs=186.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc---C----CCCCCCceEEEeCCCCCCcHHHHHHh----
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS---S----PGGPEPISVVSAAPYYSQYPAETDYL---- 107 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~---~----~gd~~~~~vl~~~p~~~~~~~~~~~~---- 107 (360)
.++++.++++++. ..++|++|+|++++++.++..+. + +|++ |++++|+|+.+...+...
T Consensus 89 ~~l~~~la~~~~~------~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~----vi~~~~~yh~~~~~~~~~~~~~ 158 (429)
T 1s0a_A 89 IELCRKLVAMTPQ------PLECVFLADSGSVAVEVAMKMALQYWQAKGEARQR----FLTFRNGYHGDTFGAMSVCDPD 158 (429)
T ss_dssp HHHHHHHHHHSCT------TCCEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCE----EEEETTCCCCSSHHHHTTSCTT
T ss_pred HHHHHHHHHhCCC------CCCEEEEeCCHHHHHHHHHHHHHHHhcccCCCCCe----EEEECCCCCCCchhhhhhcCCc
Confidence 6677777777653 34689999999999999988653 2 5776 999999998865433221
Q ss_pred ------------CCeeeeecC----------Ccccccc--C---CCeeEEEEcCC-CCCCcccch-----HHHHHHhhhc
Q 018172 108 ------------RSGLYKWDG----------DANTFDK--N---NGAYIEVVNSP-NNPDGTIRE-----AVLAKVNRSA 154 (360)
Q Consensus 108 ------------g~~~~~~~~----------~~~~~~~--~---~~~~~i~~~~p-~NPtG~~~~-----~~~~~~~~~~ 154 (360)
+...+.++. |.+.++. + +++++|+++.. |||||..++ +.+.++|+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~ 238 (429)
T 1s0a_A 159 NSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDRE 238 (429)
T ss_dssp TTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHH
T ss_pred hhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHc
Confidence 233333321 1111211 1 35556655544 689997654 4567888999
Q ss_pred CcEEEEeecccCCCCC-cC--CCCCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHHH-----hhccccCChHH
Q 018172 155 EGKLIHDLAYYWPQYT-PI--TGAADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRFI-----ELGSIGVSKES 225 (360)
Q Consensus 155 ~~~li~D~ay~~~~~~-~~--~~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~ 225 (360)
|+++|+||+|.+.... .. ....+...-+.||||.++ .| +|+||+++ ++++++.+.... ...+++.|+++
T Consensus 239 ~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t~sK~l~-~G~~~iG~~~~-~~~~~~~l~~~~~~~~~~~~t~~~n~~~ 316 (429)
T 1s0a_A 239 GILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALT-GGTMTLSATLT-TREVAETISNGEAGCFMHGPTFMGNPLA 316 (429)
T ss_dssp TCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGG-TSSSCCEEEEE-CHHHHHHHHTSTTSSCSCCCTTTTCHHH
T ss_pred CCEEEEeehhhCCcccchHHHhhhcCCCCCEEEeccccc-CCCccceEEEe-CHHHHHHhhcCCCcccccCCCCCCCHHH
Confidence 9999999999842211 10 111111111347899998 68 99999998 788888886531 22456788999
Q ss_pred HHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc---hHHH
Q 018172 226 QLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE---DEDC 302 (360)
Q Consensus 226 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 302 (360)
|.++.++++.+.+. +..++++++++++.+.|+++....... ...+.++|+|+++++ ...+
T Consensus 317 ~~a~~aal~~~~~~------~~~~~~~~~~~~l~~~L~~l~~~~~~~-----------~~~~~g~~~~~~~~~~~~~~~l 379 (429)
T 1s0a_A 317 CAAANASLAILESG------DWQQQVADIEVQLREQLAPARDAEMVA-----------DVRVLGAIGVVETTHPVNMAAL 379 (429)
T ss_dssp HHHHHHHHHHHHTC------HHHHHHHHHHHHHHHHHGGGGGCTTEE-----------EEEEETTEEEEEESSCBCHHHH
T ss_pred HHHHHHHHHHHHhC------CHHHHHHHHHHHHHHHHHHHhcCCCEE-----------EEEEeeEEEEEEECCcccHHHH
Confidence 99998888754332 355667778888888888762110000 011334577888764 3567
Q ss_pred HHHHHhhCeeeeCCCCCCCCCCeEEEEec--CChHHHHHHHHHHHHHHhchh
Q 018172 303 EKLLRAERIMARGGRRFGADAKYARVSML--SREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 303 ~~~l~~~gI~~~pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~~~ 352 (360)
.+.|.++||.++|+ .+++||+++ .++|++++++++|++++++.+
T Consensus 380 ~~~l~~~Gi~v~~~------~~~iRis~~~~~t~e~i~~~~~~l~~~~~~~~ 425 (429)
T 1s0a_A 380 QKFFVEQGVWIRPF------GKLIYLMPPYIILPQQLQRLTAAVNRAVQDET 425 (429)
T ss_dssp HHHHHHTTEECCCB------TTEEEECCCTTCCHHHHHHHHHHHHHHTSSGG
T ss_pred HHHHHHCCCEEecc------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhhh
Confidence 77777899999883 369999954 499999999999999987644
No 160
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.93 E-value=9.4e-25 Score=204.84 Aligned_cols=284 Identities=15% Similarity=0.067 Sum_probs=199.8
Q ss_pred ccc-CCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHH
Q 018172 26 YLS-DMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 26 ~y~-~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
.|+ +..+. .++|++++++++. . ++++++|+|+++..++..+ +++||+ |+++.|+|..+...
T Consensus 50 ~~~~~~~~~-----~~l~~~la~~~~~-------~-~~i~~~~gt~al~~~l~~~~~~~gd~----vl~~~~~~~~~~~~ 112 (391)
T 3dr4_A 50 WISSVGRFI-----VEFEKAFADYCGV-------K-HAIACNNGTTALHLALVAMGIGPGDE----VIVPSLTYIASANS 112 (391)
T ss_dssp CCSSCSHHH-----HHHHHHHHHHHTC-------S-EEEEESSHHHHHHHHHHHHTCCTTCE----EEEESSSCTHHHHH
T ss_pred CccCCChHH-----HHHHHHHHHHhCC-------C-cEEEeCCHHHHHHHHHHHcCCCCcCE----EEECCCchHHHHHH
Confidence 355 44555 9999999999985 3 6888888999999999999 899998 99999999999999
Q ss_pred HHHhCCeeeeecCCccc-------ccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC-CcC
Q 018172 104 TDYLRSGLYKWDGDANT-------FDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY-TPI 172 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~-------~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~-~~~ 172 (360)
++..|++++.++.+.+. +.. ++++++|+ |+||||...+ +.+.++|+++|+++|+|++|+.+.. ...
T Consensus 113 ~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~ 189 (391)
T 3dr4_A 113 VTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKAIM---PVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGK 189 (391)
T ss_dssp HHHTTCEEEEECBCTTTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE
T ss_pred HHHCCCEEEEEecCccccCcCHHHHHHhcCCCceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCe
Confidence 99999999998876432 221 35788887 6789999887 7788889999999999999985322 111
Q ss_pred -CCCCCccEEEeccc--cccCCCCceEEEEeecCHHHHHHHHHHHhhccc------------cCChHHHHHHHHHhcccC
Q 018172 173 -TGAADHDIMLFTLS--KCTGHAGSRIGWALVKDTEVARKMTRFIELGSI------------GVSKESQLRAAKILGIVS 237 (360)
Q Consensus 173 -~~~~~~~i~~~S~s--K~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~------------~~~~~~~~~~~~~l~~~~ 237 (360)
.... .++.+.||| |.++ |.+.|+++++++++.+.+......... +.......++.....
T Consensus 190 ~~~~~-~di~~~S~s~~K~l~--~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~--- 263 (391)
T 3dr4_A 190 KSGSL-GDCATFSFFGNAIIT--TGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQ--- 263 (391)
T ss_dssp ETTSS-SSEEEEECBTTSSSC--CBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHH---
T ss_pred eeccc-CCEEEEECCCCCcCC--cCCeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHH---
Confidence 1111 247777876 7664 457899988678888888776543211 011122222222121
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCC---CCcccccccccCCCCCCcccccCCc-----hHHHHHHHHhh
Q 018172 238 DDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEY---PLEYCNFTGKFTNSHPGFAWLESKE-----DEDCEKLLRAE 309 (360)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~ 309 (360)
...+++..++.+++.+++.+.|+++ ++.+..+ .+.. .....+++.+++ .+.+.+.|.++
T Consensus 264 ---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~---------~~~~~~~i~~~~~~~~~~~~l~~~L~~~ 330 (391)
T 3dr4_A 264 ---LERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGR---------HVFWMYTVRLGEGLSTTRDQVIKDLDAL 330 (391)
T ss_dssp ---HHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSC---------CCCSSEEEEECSSCSSCHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCc---------ceeEEEEEEECCccchhHHHHHHHHHHC
Confidence 1456677788888888999999888 5554433 1111 111123555554 37788889999
Q ss_pred CeeeeCCCCC---CC----------------CCCeEEEEecC--ChHHHHHHHHHHHHHH
Q 018172 310 RIMARGGRRF---GA----------------DAKYARVSMLS--REEIFNIFLERLSAIQ 348 (360)
Q Consensus 310 gI~~~pg~~f---~~----------------~~~~~R~s~~~--~~e~~~~~~~~l~~~~ 348 (360)
||.+++|... .. ....+|+++.. ++|++++++++|++++
T Consensus 331 GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 331 GIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp TCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred CCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 9999987411 00 13468998865 8999999999998764
No 161
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.93 E-value=6.9e-25 Score=204.45 Aligned_cols=286 Identities=11% Similarity=0.052 Sum_probs=200.3
Q ss_pred ccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHHHH
Q 018172 27 LSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAETD 105 (360)
Q Consensus 27 y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~~ 105 (360)
|.+..+. .++|++++++++. + ++++++|+|+++..++..+ +++||+ |+++.|+|..+...++
T Consensus 32 ~~~~~~~-----~~l~~~la~~~~~-------~-~~i~~~sgt~al~~~l~~l~~~~gd~----Vi~~~~~~~~~~~~~~ 94 (373)
T 3frk_A 32 FILGDED-----KKFEQEFADYCNV-------N-YCIGCGNGLDALHLILKGYDIGFGDE----VIVPSNTFIATALAVS 94 (373)
T ss_dssp CSSSHHH-----HHHHHHHHHHHTS-------S-EEEEESCHHHHHHHHHHHTTCCTTCE----EEEETTSCTHHHHHHH
T ss_pred ccCCchH-----HHHHHHHHHHhCC-------C-eEEEeCCHHHHHHHHHHHcCCCCcCE----EEECCCCcHHHHHHHH
Confidence 5555555 9999999999985 3 7999999999999999999 899998 9999999999999999
Q ss_pred HhCCeeeeecCCcc-------cccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCC-C
Q 018172 106 YLRSGLYKWDGDAN-------TFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPIT-G 174 (360)
Q Consensus 106 ~~g~~~~~~~~~~~-------~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~-~ 174 (360)
..|++++.++.+.+ .+.. ++++++|+ |+||||...+ +.+.++|+++|+++|+|++|+.+...... -
T Consensus 95 ~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~ 171 (373)
T 3frk_A 95 YTGAKPIFVEPDIRTYNIDPSLIESAITEKTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGMKV 171 (373)
T ss_dssp HHSCEEEEECEETTTTEECGGGTGGGCCTTEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEET
T ss_pred HcCCEEEEEeccccccCcCHHHHHHhcCCCCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCEec
Confidence 99999998876532 2222 35788888 7889999887 78888899999999999999854321111 1
Q ss_pred CCCccEEEeccc--cccCCCCceEEEEeecCHHHHHHHHHHHhhcc------------ccCChHHHHHHHHHhcccCCCc
Q 018172 175 AADHDIMLFTLS--KCTGHAGSRIGWALVKDTEVARKMTRFIELGS------------IGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 175 ~~~~~i~~~S~s--K~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~------------~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
....++.+.||| |.++.+| +.|+++++++++.+.+......+. ...+.+...++...+
T Consensus 172 ~~~~d~~~~S~~~~K~l~~~g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~------- 243 (373)
T 3frk_A 172 GSLGDAAGFSFYPAKNLGSLG-DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKL------- 243 (373)
T ss_dssp TSSSSEEEEECCTTSSSCCSS-SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHH-------
T ss_pred cccccEEEEeCcCCCccCccc-eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHH-------
Confidence 111468888877 9887435 378888867888888877664221 112333222222211
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCC-CcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCCCC
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYP-LEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGRRF 319 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~~f 319 (360)
..+++..++.+++.+++.+.|++++ +.++... +....+ ..+.+...+.+.+.+.|+++||.++++...
T Consensus 244 -~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~ 312 (373)
T 3frk_A 244 -KYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVW---------YTFVIRSEKRDELQKYLNNNGIGTLIHYPI 312 (373)
T ss_dssp -HTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCC---------SSEEEEESSHHHHHHHHHHTTBCCBCSCSS
T ss_pred -HHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceee---------EEEEEEeCCHHHHHHHHHHCCCCcccCcCC
Confidence 4456677777788888888888776 4443221 111110 012233344578889999999999976521
Q ss_pred C-----------C----C-------CCeEEEEecC--ChHHHHHHHHHHHHHHhch
Q 018172 320 G-----------A----D-------AKYARVSMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 320 ~-----------~----~-------~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
. . . .+.+|+++.. ++||+++++++|++...+.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~~ 368 (373)
T 3frk_A 313 PIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLEH 368 (373)
T ss_dssp CGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC---
T ss_pred ccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhhh
Confidence 1 0 0 1579999866 9999999999999887664
No 162
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.93 E-value=2.8e-24 Score=200.02 Aligned_cols=282 Identities=15% Similarity=0.122 Sum_probs=203.1
Q ss_pred cccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHHH
Q 018172 26 YLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
.|.+..+. .++|++++++++. + ++++++|+|+++..++..+ +++||+ |+++.|+|..+...+
T Consensus 30 ~~~~~~~~-----~~l~~~la~~~~~-------~-~~~~~~sGt~al~~al~~~~~~~gd~----Vi~~~~~~~~~~~~~ 92 (367)
T 3nyt_A 30 QYILGPEV-----TELEDRLADFVGA-------K-YCISCANGTDALQIVQMALGVGPGDE----VITPGFTYVATAETV 92 (367)
T ss_dssp CCSSCHHH-----HHHHHHHHHHHTC-------S-EEEEESCHHHHHHHHHHHTTCCTTCE----EEEESSSCTHHHHHH
T ss_pred CccCChHH-----HHHHHHHHHHhCC-------C-cEEEeCCHHHHHHHHHHHhCCCCcCE----EEECCCccHHHHHHH
Confidence 35444555 9999999999985 3 7999999999999999999 889998 999999999999999
Q ss_pred HHhCCeeeeecCCccc-------ccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC-c-C
Q 018172 105 DYLRSGLYKWDGDANT-------FDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT-P-I 172 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~~-------~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~-~-~ 172 (360)
...|++++.++.+.+. ++. ++++++|+ |+||||...+ +.+.++|+++|+++|+|++|+.+... . .
T Consensus 93 ~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~ 169 (367)
T 3nyt_A 93 ALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKR 169 (367)
T ss_dssp HHTTCEEEEECBCTTTCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEE
T ss_pred HHcCCEEEEEecCCccCCcCHHHHHHhcCcCCcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCee
Confidence 9999999998876542 221 35788887 8899998877 77888999999999999999853221 1 1
Q ss_pred CCCCCccEEEecc--ccccCCCCceEEEEeecCHHHHHHHHHHHhhc------------cccCChHHHHHHHHHhcccCC
Q 018172 173 TGAADHDIMLFTL--SKCTGHAGSRIGWALVKDTEVARKMTRFIELG------------SIGVSKESQLRAAKILGIVSD 238 (360)
Q Consensus 173 ~~~~~~~i~~~S~--sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~------------~~~~~~~~~~~~~~~l~~~~~ 238 (360)
.+..+ ++.+.|| +|.++.+|. .|+++++++++.+.+....... +...+...+.++...+
T Consensus 170 ~~~~~-di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l----- 242 (367)
T 3nyt_A 170 SCNLS-TVACTSFFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKL----- 242 (367)
T ss_dssp TTSSS-SEEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHH-----
T ss_pred ccCCC-CEEEEECCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHH-----
Confidence 11222 7889997 899996576 8899887789998888765431 2334444444444433
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCC-CCcccccccccCCCCCCcccccCCchHHHHHHHHhhCeeeeCCC
Q 018172 239 DYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEY-PLEYCNFTGKFTNSHPGFAWLESKEDEDCEKLLRAERIMARGGR 317 (360)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~pg~ 317 (360)
+.+++..++.+++.+++.+.|++++ +.+... .+....+ ..+.+..++.+.+.+.|+++||.++++.
T Consensus 243 ---~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~L~~~GI~~~~~~ 309 (367)
T 3nyt_A 243 ---EIFEEEIALRQKVAAEYDLSLKQVG-IGTPFIEVNNISVY---------AQYTVRMDNRESVQASLKAAGVPTAVHY 309 (367)
T ss_dssp ---HTHHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTEECCC---------SSEEEECSSHHHHHHHHHHHTCCCBCSC
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhccCC-eeccCCCCCCceee---------EEEEEEeCCHHHHHHHHHHCCCceeccC
Confidence 3345566677777888888898884 333222 2211111 1234555555888899999999998765
Q ss_pred CC--------C-C----------CCCeEEEEecC--ChHHHHHHHHHHHHH
Q 018172 318 RF--------G-A----------DAKYARVSMLS--REEIFNIFLERLSAI 347 (360)
Q Consensus 318 ~f--------~-~----------~~~~~R~s~~~--~~e~~~~~~~~l~~~ 347 (360)
.. . . ....+|+++.. ++||++++++++++.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 310 PIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp SSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred CCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 31 1 0 02358999866 899999999988764
No 163
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.93 E-value=1.5e-24 Score=207.51 Aligned_cols=284 Identities=11% Similarity=0.034 Sum_probs=191.2
Q ss_pred cccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCC-CCcHHHH
Q 018172 26 YLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYY-SQYPAET 104 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~-~~~~~~~ 104 (360)
.|.+..+. .+||++++++++. +++++|+|+++++..++..++++|| +++.|+| ..+...+
T Consensus 70 ~y~~~~~~-----~~l~~~la~~~~~--------~~~~~~~~gt~a~~~al~~l~~~gd------i~~~~~~~~~~~~~~ 130 (456)
T 2ez2_A 70 AYAGSENF-----YHLERTVQELFGF--------KHIVPTHQGRGAENLLSQLAIKPGQ------YVAGNMYFTTTRYHQ 130 (456)
T ss_dssp CSSSCHHH-----HHHHHHHHHHHCC--------SEEEEESSHHHHHHHHHHHHCCTTC------EEEESSCCHHHHHHH
T ss_pred hcccChhH-----HHHHHHHHHHhCC--------CcEEEeCCcHHHHHHHHHHhCCCCC------EeccccccchhHHHH
Confidence 46655565 9999999999984 3799999999999999999988875 6778999 7778889
Q ss_pred HHhCCeeeeecCCcc-----------cccc-------CCC----eeEEEEcCCCC-CCcccch----HHHHHHhhhcCcE
Q 018172 105 DYLRSGLYKWDGDAN-----------TFDK-------NNG----AYIEVVNSPNN-PDGTIRE----AVLAKVNRSAEGK 157 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~-----------~~~~-------~~~----~~~i~~~~p~N-PtG~~~~----~~~~~~~~~~~~~ 157 (360)
...|++++.++++.+ .++. +++ +++|++++|+| |||.+++ +.+.++|+++|++
T Consensus 131 ~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~ 210 (456)
T 2ez2_A 131 EKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIK 210 (456)
T ss_dssp HHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCC
T ss_pred HHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCe
Confidence 999999998876521 1221 123 38999999999 9999887 4567888999999
Q ss_pred EEEeecccCC----------CCCcCC--------CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhc--
Q 018172 158 LIHDLAYYWP----------QYTPIT--------GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELG-- 217 (360)
Q Consensus 158 li~D~ay~~~----------~~~~~~--------~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~-- 217 (360)
+|+|++|..+ .+.... .... ++++.|++|..+ +| ++||+++.++++++.+.......
T Consensus 211 li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~-d~~~~S~kk~~~-~~-~gG~~~~~~~~~~~~~~~~~~~~~~ 287 (456)
T 2ez2_A 211 VFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYA-DGCTMSGKKDCL-VN-IGGFLCMNDDEMFSSAKELVVVYEG 287 (456)
T ss_dssp EEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTC-SEEEEETTTTTC-CS-SCEEEEESCHHHHHHHHHHHHHHTC
T ss_pred EEEEccccccccccccccccccCCcchhhhhhhhcccC-CEEEEeCcccCC-CC-ceeEEEECCHHHHHHHHHHHhhccC
Confidence 9999998752 222111 1222 345558888765 67 78999885688888887655321
Q ss_pred ---cccCChHHHHH-HHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCccc
Q 018172 218 ---SIGVSKESQLR-AAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAW 293 (360)
Q Consensus 218 ---~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (360)
..+.+.....+ +.+.++.+. ++..++.+++.+++.+.|++. ++.+..|.+++ ++|
T Consensus 288 ~~~~~~~~~~~~~a~a~~~~~~~~-------~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~~~~-------------~~~ 346 (456)
T 2ez2_A 288 MPSYGGLAGRDMEAMAIGLREAMQ-------YEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGH-------------AVF 346 (456)
T ss_dssp CTTTTTCCHHHHHHHHHHHHHHTC-------HHHHHHHHHHHHHHHHHHHHT-TCCBCSSCCSS-------------EEE
T ss_pred cccccCcchhHHHHHHHHHHHHhH-------HHHHHHHHHHHHHHHHHHhcC-CCccccCCCce-------------EEE
Confidence 12233333222 222222110 234444455567777788775 44444454443 455
Q ss_pred ccCC------ch-HH-----HHHHHHhhCeeeeC-CCCC-------C----CCCCeEEEEec---CChHHHHHHHHHHHH
Q 018172 294 LESK------ED-ED-----CEKLLRAERIMARG-GRRF-------G----ADAKYARVSML---SREEIFNIFLERLSA 346 (360)
Q Consensus 294 ~~~~------~~-~~-----~~~~l~~~gI~~~p-g~~f-------~----~~~~~~R~s~~---~~~e~~~~~~~~l~~ 346 (360)
+++. +. +. +..+++++||.+.+ |..| + ...+++||++. .++|++++++++|++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~ 426 (456)
T 2ez2_A 347 LDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIK 426 (456)
T ss_dssp EEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred EEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 4431 11 22 33333788999766 4432 1 12478999997 589999999999999
Q ss_pred HHhchh
Q 018172 347 IQGGSI 352 (360)
Q Consensus 347 ~~~~~~ 352 (360)
++.+.+
T Consensus 427 ~l~~~~ 432 (456)
T 2ez2_A 427 LYQHKE 432 (456)
T ss_dssp HHHTGG
T ss_pred HHhhhh
Confidence 997643
No 164
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.93 E-value=2.3e-25 Score=211.05 Aligned_cols=267 Identities=13% Similarity=0.017 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHhhcCCCCCC-CCcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHH-HhC-------
Q 018172 39 PELAEAINNLHHVVDNAVSD-GRHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETD-YLR------- 108 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~-~~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~-~~g------- 108 (360)
.++++.++++++. + +++|++|+|+++++..++..+.. +|+. |++++|+|+.+...+. ..|
T Consensus 89 ~~l~~~la~~~~~------~~~~~v~~~~gg~ea~~~ai~~~~~~~~~~----vi~~~p~yh~~~~~~~~~~~~~~~~~~ 158 (419)
T 2eo5_A 89 LELAKKLVTYSPG------NFQKKVFFSNSGTEAIEASIKVVKNTGRKY----IIAFLGGFHGRTFGSISLTASKAVQRS 158 (419)
T ss_dssp HHHHHHHHHHSSC------SSCEEEEEESSHHHHHHHHHHHHHTTSCCE----EEEETTCCCCSSHHHHHHCCSCGGGGC
T ss_pred HHHHHHHHHhCCC------CcCCEEEEeCchHHHHHHHHHHHHHhhCCc----EEEECCCcCCCCHhhHhhcCCcccccc
Confidence 6777777777653 3 46899999999999999987654 3776 9999999986654433 211
Q ss_pred ------CeeeeecCCc----------------------cccc-c--C-----CCeeEEEEcCCC-CCCccc-ch----HH
Q 018172 109 ------SGLYKWDGDA----------------------NTFD-K--N-----NGAYIEVVNSPN-NPDGTI-RE----AV 146 (360)
Q Consensus 109 ------~~~~~~~~~~----------------------~~~~-~--~-----~~~~~i~~~~p~-NPtG~~-~~----~~ 146 (360)
.+++.++.+. +.++ . + +++++|+ ++|+ ||||.. .+ +.
T Consensus 159 ~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi-~~p~~~~tG~~~~~~~~l~~ 237 (419)
T 2eo5_A 159 IVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIF-FEPIQGEGGYVIPPKNFFAE 237 (419)
T ss_dssp SSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEE-ECSSBTTTTSBCCCTTHHHH
T ss_pred ccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEE-EeCccCCCCCccCCHHHHHH
Confidence 2445555432 1333 2 1 3445555 4554 678975 43 46
Q ss_pred HHHHhhhcCcEEEEeecccCCCCC-cC--CCCCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHHHhhccccCC
Q 018172 147 LAKVNRSAEGKLIHDLAYYWPQYT-PI--TGAADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRFIELGSIGVS 222 (360)
Q Consensus 147 ~~~~~~~~~~~li~D~ay~~~~~~-~~--~~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~ 222 (360)
+.++|+++|+++|+||+|.+.... .. ....+...-+.||||.++ .| +|+||+++ +++++ .+ ......+++.|
T Consensus 238 l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~-~G~~riG~~~~-~~~~~-~~-~~~~~~t~~~n 313 (419)
T 2eo5_A 238 LQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVITLAKALG-GGIMPIGATIF-RKDLD-FK-PGMHSNTFGGN 313 (419)
T ss_dssp HHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGG-TTTSCCEEEEE-EGGGC-CC-------CCCCC
T ss_pred HHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEEEeccccc-CCccceEEEEE-chHhh-cC-CcccCCCCCCC
Confidence 678899999999999999843211 10 111111111348999999 59 99999999 66766 66 32334567889
Q ss_pred hHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccC-Cc--h
Q 018172 223 KESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLES-KE--D 299 (360)
Q Consensus 223 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~ 299 (360)
+++|.++.++++.. ++.+++++++++++.+.|+++ +... ++.++|+|+++ ++ .
T Consensus 314 ~~~~~aa~aal~~~--------~~~~~~~~~~~~~l~~~L~~~--~~~~--------------~~~g~~~~i~~~~~~~~ 369 (419)
T 2eo5_A 314 ALACAIGSKVIDIV--------KDLLPHVNEIGKIFAEELQGL--ADDV--------------RGIGLAWGLEYNEKKVR 369 (419)
T ss_dssp HHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHTTS--SSEE--------------EEETTEEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHh--hhhe--------------EeeeEEEEEEEecCccH
Confidence 99999999988732 227888999999999999776 1111 13345778888 32 1
Q ss_pred -HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec--CChHHHHHHHHHHHHHHhc
Q 018172 300 -EDCEKLLRAERIMARGGRRFGADAKYARVSML--SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 300 -~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~ 350 (360)
. +.+.|.++||.++|+. .+++||+++ .++|++++++++|++++++
T Consensus 370 ~~-~~~~l~~~Gv~v~~~~-----~~~lRis~~~~~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 370 DR-IIGESFKRGLLLLPAG-----RSAIRVIPPLVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp HH-HHHHHHHTTEECEEET-----TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHCCCEEecCC-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 5 7777779999999863 569999764 4999999999999998864
No 165
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.93 E-value=5.7e-25 Score=208.45 Aligned_cols=270 Identities=13% Similarity=0.070 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC-------CCC-CCCceEEEeCCCCCCcHH-HHHHhCC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS-------PGG-PEPISVVSAAPYYSQYPA-ETDYLRS 109 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~-------~gd-~~~~~vl~~~p~~~~~~~-~~~~~g~ 109 (360)
.++++.++++++ . ++|++|+|+++++..++..+.. +|+ . |++++|+|..... .+...|.
T Consensus 102 ~~l~~~la~~~g-------~-~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~----vi~~~~~yh~~~~~~~~~~g~ 169 (420)
T 2pb2_A 102 LRLGRKLIDATF-------A-ERVLFMNSGTEANETAFKLARHYACVRHSPFKTK----IIAFHNAFHGRSLFTVSVGGQ 169 (420)
T ss_dssp HHHHHHHHHHSS-------C-SEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCE----EEEETTCCCCSSHHHHHHSSC
T ss_pred HHHHHHHHhhCC-------C-CeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCE----EEEEeCCcCCcCHHHHHhcCC
Confidence 666666666654 3 5899999999999999998865 664 5 9999999987754 4445554
Q ss_pred e------------eeeecC-Ccccccc--CCCeeEEEEcCCCCCCcc-cch----HHHHHHhhhcCcEEEEeecccCCCC
Q 018172 110 G------------LYKWDG-DANTFDK--NNGAYIEVVNSPNNPDGT-IRE----AVLAKVNRSAEGKLIHDLAYYWPQY 169 (360)
Q Consensus 110 ~------------~~~~~~-~~~~~~~--~~~~~~i~~~~p~NPtG~-~~~----~~~~~~~~~~~~~li~D~ay~~~~~ 169 (360)
+ +..++. |.+.++. ++++++|+++.++|++|. +++ +.+.++|+++|+++|+||+|.+...
T Consensus 170 ~~~~~~~~p~~~~~~~~~~~d~~~le~~i~~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~ 249 (420)
T 2pb2_A 170 PKYSDGFGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGR 249 (420)
T ss_dssp HHHHTTSSSCCSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred ccccccCCCCCCCeEEecCCCHHHHHHHhccCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCccc
Confidence 3 444442 3344432 467899999888888885 344 4677889999999999999974221
Q ss_pred C--cC----CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhH
Q 018172 170 T--PI----TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 170 ~--~~----~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
. .. .+. ..+++ ||||.++ +|+|+||+++ ++++++.+.......+++.|++.|.++.++++.+.+
T Consensus 250 ~g~~~~~~~~~~-~~dii--t~sK~l~-~G~~iG~~~~-~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~----- 319 (420)
T 2pb2_A 250 TGDLFAYMHYGV-TPDIL--TSAKALG-GGFPVSAMLT-TQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT----- 319 (420)
T ss_dssp TSSSSHHHHHTC-CCSEE--EECGGGG-TTSCCEEEEE-CHHHHTTCC----CCEECCCHHHHHHHHHHHHHHSS-----
T ss_pred CCcHHHHHhcCC-CCCeE--Eeccccc-CCCceEEEEE-hHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh-----
Confidence 1 11 111 22333 7899999 8999999999 788887776544445678899999999888875532
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc----CCcccCCCCCcccccccccCCCCCCcccccCCc-----hHHHHHHHHhhCeeee
Q 018172 244 FEYGRRLMSERWNMLRQVIRQS----GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-----DEDCEKLLRAERIMAR 314 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~gI~~~ 314 (360)
++..++++++++++.+.|+++ +.+... ++.++|+++.+++ ...+.+.|.++||.+.
T Consensus 320 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--------------~~~g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~ 384 (420)
T 2pb2_A 320 -PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDI--------------RGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVL 384 (420)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE--------------EEETTEEEEEECGGGTTCHHHHHHHHHHTTEECE
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE--------------EecceEEEEEECCCchHHHHHHHHHHHHCCCEEE
Confidence 356677788888888888765 211111 1234466777653 3567777778999999
Q ss_pred CCCCCCCCCCeEEEEec--CChHHHHHHHHHHHHHHhc
Q 018172 315 GGRRFGADAKYARVSML--SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 315 pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~ 350 (360)
|+. ++++||++. .++|++++++++|++++++
T Consensus 385 ~~~-----~~~iRl~~~~~~t~eei~~~~~~l~~~l~~ 417 (420)
T 2pb2_A 385 NAG-----ADVMRFAPSLVVEEADIHEGMQRFAQAVGK 417 (420)
T ss_dssp ESS-----TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eCC-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 863 579999953 4999999999999998864
No 166
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.8e-25 Score=212.84 Aligned_cols=284 Identities=10% Similarity=0.050 Sum_probs=199.5
Q ss_pred HHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcC-----CC---CCCCceEEEeCCCCCCcHHHHHHhCC
Q 018172 39 PELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSS-----PG---GPEPISVVSAAPYYSQYPAETDYLRS 109 (360)
Q Consensus 39 ~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~-----~g---d~~~~~vl~~~p~~~~~~~~~~~~g~ 109 (360)
.++++.+++++. ..|.+.. .+++++|+|+++++..++.++.+ +| +. |+++.|+|..+...++..|+
T Consensus 106 ~~l~~~~~~~la~~~g~~~~-~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~----Vi~~~~~h~~~~~~~~~~G~ 180 (497)
T 3mc6_A 106 RKMESEVVSMVLRMFNAPSD-TGCGTTTSGGTESLLLACLSAKMYALHHRGITEPE----IIAPVTAHAGFDKAAYYFGM 180 (497)
T ss_dssp HHHHHHHHHHHHHHTTCCTT-TCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCE----EEEETTSCHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHhCCCCC-CCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCce----EEEeCCccHHHHHHHHHcCC
Confidence 566666655432 2233222 35899999999999999998864 45 55 99999999999999999999
Q ss_pred eeeeecCCcc-------cccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCC-----------C
Q 018172 110 GLYKWDGDAN-------TFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWP-----------Q 168 (360)
Q Consensus 110 ~~~~~~~~~~-------~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~-----------~ 168 (360)
+++.++.+.+ .+.. ++++++|++++|+||||.+.+ +.+.++|+++|+++|+|++|+.. .
T Consensus 181 ~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~ 260 (497)
T 3mc6_A 181 KLRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKN 260 (497)
T ss_dssp EEEEECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCS
T ss_pred eEEEEecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccC
Confidence 9999987652 2221 457999999999999999988 67778888899999999999731 1
Q ss_pred CCcC-CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHH-hhc---c---c----cCC---hHHHHHHHHHh
Q 018172 169 YTPI-TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFI-ELG---S---I----GVS---KESQLRAAKIL 233 (360)
Q Consensus 169 ~~~~-~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~-~~~---~---~----~~~---~~~~~~~~~~l 233 (360)
.++. ....+.++++.|++|.++ .|.++|+++++++.+ ....... ... . . +.+ ..++.++...+
T Consensus 261 ~~~~~~~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l 338 (497)
T 3mc6_A 261 LPLLDFRVPGVTSISCDTHKYGF-APKGSSVIMYRNSDL-RMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNM 338 (497)
T ss_dssp CCCCSTTSTTCCEEEEETTTTTC-CCSSCEEEECSSHHH-HTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHH
T ss_pred CccccccCCCCcEEEECchhhcC-CCCCceeEEecCHHH-HhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHH
Confidence 1112 234566899999999764 677899999854443 3221111 000 0 0 011 22233333333
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHh-cCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhC
Q 018172 234 GIVSDDYPNFFEYGRRLMSERWNMLRQVIRQ-SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAER 310 (360)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~g 310 (360)
. ...+++..++..++.+++.+.|++ ++++.+..+. ..+++++..++ ...+.+.|.++|
T Consensus 339 ~------~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~L~~~G 399 (497)
T 3mc6_A 339 G------ENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNP-------------RYSVISFSSKTLNIHELSDRLSKKG 399 (497)
T ss_dssp H------HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCC-------------CSSEEEEECTTTTHHHHHHHHHTTT
T ss_pred h------HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-------------CeeEEEEeCCCCCHHHHHHHHHhCC
Confidence 3 256678888899999999999999 5766654332 12244445443 377888899999
Q ss_pred eeeeCCCCCCCCCCeEEEEecC-ChHHHHHHHHHHHHHHhchh
Q 018172 311 IMARGGRRFGADAKYARVSMLS-REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 311 I~~~pg~~f~~~~~~~R~s~~~-~~e~~~~~~~~l~~~~~~~~ 352 (360)
|.++++.. +..+|++++. ++|++++++++|++++.+.+
T Consensus 400 i~v~~~~~----~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~ 438 (497)
T 3mc6_A 400 WHFNALQK----PVALHMAFTRLSAHVVDEICDILRTTVQELK 438 (497)
T ss_dssp CBCEECCS----SCCEEEECCTTTTCTHHHHHHHHHHHHHHHT
T ss_pred EEEecCCC----CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 99886532 3468999876 89999999999999997643
No 167
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.93 E-value=4.8e-25 Score=212.13 Aligned_cols=271 Identities=13% Similarity=0.062 Sum_probs=194.8
Q ss_pred cEEEcCChHHHHHHHHHhh----cCCCC-CCCceEEEeCCCCCCcHHHHHHhCCeeeeecCCccc------ccc--CCCe
Q 018172 61 HIVIGTGSTQLYQAALYAL----SSPGG-PEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDANT------FDK--NNGA 127 (360)
Q Consensus 61 ~i~~t~G~t~~l~~~~~~l----~~~gd-~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~------~~~--~~~~ 127 (360)
.+++|+|+++++..++..+ .++|| ..+.+|+++.|+|+.+...++..|++++.++.+.++ ++. ++++
T Consensus 125 ~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~~~t 204 (474)
T 1wyu_B 125 ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELGPHV 204 (474)
T ss_dssp EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCSTTE
T ss_pred eeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCCCCCcCHHHHHHhhCCCc
Confidence 4778899999998765554 35777 222349999999999999999999999999875332 211 4679
Q ss_pred eEEEEcCCCCCCcccc-h-HHHHHHhhhcCcEEEEeecccCCCCCcC-CCCCCccEEEeccccccCCC-C---ceEEEEe
Q 018172 128 YIEVVNSPNNPDGTIR-E-AVLAKVNRSAEGKLIHDLAYYWPQYTPI-TGAADHDIMLFTLSKCTGHA-G---SRIGWAL 200 (360)
Q Consensus 128 ~~i~~~~p~NPtG~~~-~-~~~~~~~~~~~~~li~D~ay~~~~~~~~-~~~~~~~i~~~S~sK~~~~~-G---~r~G~~~ 200 (360)
++|++++| ||||.+. + +.+.++|+++|+++|+|++|..+..... ....+.++++.|+||.|+.| | .|+||++
T Consensus 205 ~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~ 283 (474)
T 1wyu_B 205 AALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVG 283 (474)
T ss_dssp EEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEE
T ss_pred eEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCcEEEEeCccccccCCCCCCCCeEEEE
Confidence 99999998 5899884 4 6788889989999999999975432111 12335789999999999876 4 5999999
Q ss_pred ecCHHHHHHHHH-HH------------------hhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHH
Q 018172 201 VKDTEVARKMTR-FI------------------ELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQV 261 (360)
Q Consensus 201 ~~~~~~~~~l~~-~~------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 261 (360)
+ ++++++.+.. .. .....+.+...+.++.+.+..+. .+.+++..+++.++++++.+.
T Consensus 284 ~-~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g---~~~l~~~~~~~~~~~~~l~~~ 359 (474)
T 1wyu_B 284 V-KAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLG---LEGLKKAAALAVLNARYLKEL 359 (474)
T ss_dssp E-CGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred E-cHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 9 6777666541 10 01123456677777777665321 266888899999999999999
Q ss_pred HHhcCCcccCCCCCcccccccccCCCCCCcccccCC---chHHHHHHHHhhCeeeeCCCCCCC-CCCeEEEEecC--ChH
Q 018172 262 IRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK---EDEDCEKLLRAERIMARGGRRFGA-DAKYARVSMLS--REE 335 (360)
Q Consensus 262 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gI~~~pg~~f~~-~~~~~R~s~~~--~~e 335 (360)
|+++ ++.+..+...+. .++++++ +...+.+.|.++||.+ |+..|+. ..+++||+++. +++
T Consensus 360 L~~~-g~~~~~~~~~~~------------~~~~~~~~~~~~~~l~~~L~~~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e 425 (474)
T 1wyu_B 360 LKEK-GYRVPYDGPSMH------------EFVAQPPEGFRALDLAKGLLELGFHP-PTVYFPLIVKEALMVEPTETEAKE 425 (474)
T ss_dssp HHHT-TCBCSSCSSCCS------------CEEEBCSTTCCHHHHHHHHHHTTCCC-CEESCSTTSTTCEEECCCTTSCHH
T ss_pred Hhhc-CcEecCCCCcce------------EEEEEcCCCCCHHHHHHHHHHCCccc-cccccccccCCEEEEEeecCCCHH
Confidence 9987 555432221110 1344442 2266777777889985 6666642 36799999976 899
Q ss_pred HHHHHHHHHHHHHhc
Q 018172 336 IFNIFLERLSAIQGG 350 (360)
Q Consensus 336 ~~~~~~~~l~~~~~~ 350 (360)
++++++++|++++++
T Consensus 426 ~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 426 TLEAFAEAMGALLKK 440 (474)
T ss_dssp HHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999876
No 168
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.93 E-value=4.9e-25 Score=210.84 Aligned_cols=282 Identities=13% Similarity=0.072 Sum_probs=189.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc-----C---CCCCCCceEEEeCCCCCCcHHHHHHhCCe
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS-----S---PGGPEPISVVSAAPYYSQYPAETDYLRSG 110 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~-----~---~gd~~~~~vl~~~p~~~~~~~~~~~~g~~ 110 (360)
.+|++.++++++. ..+ |++|+|+++++..++..+. . +++. |++.+|+|..+...+...+..
T Consensus 94 ~~la~~l~~~~~~------~~~-v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~----vi~~~~~yhg~~~~~~~~~~~ 162 (452)
T 3n5m_A 94 IKLAEKLNEWLGG------EYV-IFFSNSGSEANETAFKIARQYYAQKGEPHRYK----FMSRYRGYHGNTMATMAATGQ 162 (452)
T ss_dssp HHHHHHHHHHHTS------CEE-EEEESSHHHHHHHHHHHHHHHHHTTTCTTCCE----EEEETTCCCCSSHHHHHSCCC
T ss_pred HHHHHHHHHhCCC------Cce-EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCE----EEEECCCcCCCCHHHHhcCCc
Confidence 5666666666553 333 9999999999999999887 4 5565 999999999887666555432
Q ss_pred e-------------eeecC---------C---------cccccc--C----CCeeEEEEcCC-CCCCcccch-----HHH
Q 018172 111 L-------------YKWDG---------D---------ANTFDK--N----NGAYIEVVNSP-NNPDGTIRE-----AVL 147 (360)
Q Consensus 111 ~-------------~~~~~---------~---------~~~~~~--~----~~~~~i~~~~p-~NPtG~~~~-----~~~ 147 (360)
. ..++. | .+.++. + +++++|+++.+ +| ||.+++ +.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l 241 (452)
T 3n5m_A 163 AQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAV 241 (452)
T ss_dssp GGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHH
T ss_pred hhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHH
Confidence 2 12221 0 122211 1 45677888777 89 998763 467
Q ss_pred HHHhhhcCcEEEEeecccCCCCCc---CCCCCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHH------HHhhc
Q 018172 148 AKVNRSAEGKLIHDLAYYWPQYTP---ITGAADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTR------FIELG 217 (360)
Q Consensus 148 ~~~~~~~~~~li~D~ay~~~~~~~---~~~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~------~~~~~ 217 (360)
.++|+++|+++|+||+|.+..... .....+...-+.+|||.++ .| +|+||+++ ++++++.+.. +....
T Consensus 242 ~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~-~G~~~ig~~~~-~~~i~~~~~~~~~~~~~~~~~ 319 (452)
T 3n5m_A 242 HETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIITMAKGIT-SAYLPLSATAV-KREIYEAFKGKGEYEFFRHIN 319 (452)
T ss_dssp HHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGG-TTSSCCEEEEE-EHHHHGGGCSSSTTCSCCCCC
T ss_pred HHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEeeccccc-CCCcceEEEEE-CHHHHHHHhhccCCCCccccC
Confidence 788999999999999998532111 1122222223457899999 49 99999998 8999888843 11235
Q ss_pred cccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC
Q 018172 218 SIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK 297 (360)
Q Consensus 218 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (360)
+++.|++++.++.++++.+.+. ...++.++.....++.+.+.+.+++.+.... +.+.|+++.+.
T Consensus 320 t~~~~~~~~aaa~aal~~~~~~--~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--------------~~g~~~~i~~~ 383 (452)
T 3n5m_A 320 TFGGNPAACALALKNLEIIENE--NLIERSAQMGSLLLEQLKEEIGEHPLVGDIR--------------GKGLLVGIELV 383 (452)
T ss_dssp SSTTCHHHHHHHHHHHHHHHHT--THHHHHHHHHHHHHHHHHHHHTTCTTEEEEE--------------ESSSCEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE--------------EEEEEEEEEEe
Confidence 6788999999999988754322 4455555555555555555445554333222 23334555442
Q ss_pred c----------h--HHHHHHHHhhCeeeeCCCCCCC-CCCeEEEEe--cCChHHHHHHHHHHHHHHhc
Q 018172 298 E----------D--EDCEKLLRAERIMARGGRRFGA-DAKYARVSM--LSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 298 ~----------~--~~~~~~l~~~gI~~~pg~~f~~-~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~ 350 (360)
+ . ..+.+.|.++||.++|+..|.. .++++||++ ..++|++++++++|++++.+
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 384 NDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp EETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred cCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 1 1 3567788899999999886643 367999974 44999999999999999864
No 169
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.93 E-value=5.8e-24 Score=200.89 Aligned_cols=278 Identities=14% Similarity=0.100 Sum_probs=187.2
Q ss_pred HHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH---HHHHh--CCeeeeec
Q 018172 41 LAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA---ETDYL--RSGLYKWD 115 (360)
Q Consensus 41 lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~---~~~~~--g~~~~~~~ 115 (360)
+++.++++++. +.++|++++| ++++..++..++++||+ |+++.|+|..+.. .+... +..++.++
T Consensus 76 ~~~~la~~~g~------~~~~i~~~sG-t~a~~~~~~~~~~~gd~----vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 144 (417)
T 3n0l_A 76 AIERCKKLFNC------KFANVQPNSG-SQANQGVYAALINPGDK----ILGMDLSHGGHLTHGAKVSSSGKMYESCFYG 144 (417)
T ss_dssp HHHHHHHHHTC------SEEECCCSSH-HHHHHHHHHHHSCTTCE----EEEECC----------------CCSEEEEEC
T ss_pred HHHHHHHHhCC------CCcceEeccH-HHHHHHHHHHhcCCCCE----EEecccccccccchhhhhhhhcceeeeEecc
Confidence 34467777775 4446888888 79999999999999998 9999999987655 33333 34455555
Q ss_pred CCcc------cccc--C-CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccC-----CCCCcCCCCCCccE
Q 018172 116 GDAN------TFDK--N-NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYW-----PQYTPITGAADHDI 180 (360)
Q Consensus 116 ~~~~------~~~~--~-~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~-----~~~~~~~~~~~~~i 180 (360)
.+.+ .+.. + +++++|++++||| |..++ +.+.++|+++|+++|+|++|.. +..+.. ....++
T Consensus 145 ~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~--~~~~di 220 (417)
T 3n0l_A 145 VELDGRIDYEKVREIAKKEKPKLIVCGASAY--ARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSP--FPYAHV 220 (417)
T ss_dssp CCTTSSCCHHHHHHHHHHHCCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCC--TTTCSE
T ss_pred CCCCCCcCHHHHHHHHHhcCCeEEEECCccc--CccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCc--cccceE
Confidence 5422 1211 2 4789999888886 77777 6778889999999999999752 111111 124679
Q ss_pred EEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccc-cCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHH
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSI-GVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLR 259 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 259 (360)
++.|+||.+ +|.|+||++++++++.+.+......... +.+...+.++..++.... +..+++.+++++++++++.
T Consensus 221 ~~~s~sK~l--~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~---~~~~~~~~~~~~~~~~~l~ 295 (417)
T 3n0l_A 221 VSSTTHKTL--RGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNL---SDEWKVYAKQVRTNAQVLA 295 (417)
T ss_dssp EEEESSTTT--CSCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHT---SHHHHHHHHHHHHHHHHHH
T ss_pred EEeeCcccc--CCCCeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHH
Confidence 999999987 6888999999448999998877654333 334444444444454322 1667889999999999999
Q ss_pred HHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHHhhCeeeeCCCCCCC-----CCCeEEEEe
Q 018172 260 QVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLRAERIMARGGRRFGA-----DAKYARVSM 330 (360)
Q Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gI~~~pg~~f~~-----~~~~~R~s~ 330 (360)
+.|++. ++.+... + ..++++|+.+.. ...+.++|.++||.++++..+.. ....+|+++
T Consensus 296 ~~L~~~-g~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~ 362 (417)
T 3n0l_A 296 NVLMDR-KFKLVSD-G-----------TDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGT 362 (417)
T ss_dssp HHHHHT-TCEEGGG-S-----------CSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEEC
T ss_pred HHHHhC-CceeccC-C-----------CCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecC
Confidence 999885 3443321 1 223366777642 37888899999999987543321 245799987
Q ss_pred c------CChHHHHHHHHHHHHHHhch
Q 018172 331 L------SREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 331 ~------~~~e~~~~~~~~l~~~~~~~ 351 (360)
. .+++++++++++|.+++.+.
T Consensus 363 ~~~~~~~~~~~~i~~~~~~l~~~l~~~ 389 (417)
T 3n0l_A 363 PALTARGFKEKEMEIVSNYIADILDDV 389 (417)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 4 25799999999999999753
No 170
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.93 E-value=2.9e-25 Score=211.54 Aligned_cols=267 Identities=11% Similarity=0.009 Sum_probs=177.2
Q ss_pred CcEEEcCChHHHHHHHHHhh--cCCCCCCCceEEEeCCCCCCcHHHHHHh-CCee--------------eeecCC-----
Q 018172 60 RHIVIGTGSTQLYQAALYAL--SSPGGPEPISVVSAAPYYSQYPAETDYL-RSGL--------------YKWDGD----- 117 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l--~~~gd~~~~~vl~~~p~~~~~~~~~~~~-g~~~--------------~~~~~~----- 117 (360)
+++++|+|+++++..++..+ ..+++. |++.+|+|......+..+ |... ..++.+
T Consensus 105 ~~v~~~~ggsea~~~al~~~~~~~~~~~----vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (439)
T 3dxv_A 105 HKIWFGHSGSDANEAAYRAIVKATGRSG----VIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRND 180 (439)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHSCCE----EEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTB
T ss_pred CEEEEeCCHHHHHHHHHHHHHHHhCCCE----EEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCccccc
Confidence 58999999999999999885 234455 888899987665554443 3221 223322
Q ss_pred ------cccccc------CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCc--C-CCCCC
Q 018172 118 ------ANTFDK------NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTP--I-TGAAD 177 (360)
Q Consensus 118 ------~~~~~~------~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~--~-~~~~~ 177 (360)
.+.++. .+++++|+++.++|++|.+.+ +.+.++|+++|+++|+||+|.+..... . ....+
T Consensus 181 ~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~ 260 (439)
T 3dxv_A 181 PTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEG 260 (439)
T ss_dssp TTSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTT
T ss_pred ccHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcC
Confidence 222211 346788888888889998866 567788999999999999998421111 1 11112
Q ss_pred ccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHH
Q 018172 178 HDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNM 257 (360)
Q Consensus 178 ~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 257 (360)
...-+.||||.++ +|+|+||+++ ++++++.+.......++ .+++++.++.++++.+.+. ...++.++..+..++.
T Consensus 261 ~~~di~s~sK~~~-~G~riG~~~~-~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~~--~~~~~~~~~~~~~~~~ 335 (439)
T 3dxv_A 261 FVPDILVLGKGLG-GGLPLSAVIA-PAEILDCASAFAMQTLH-GNPISAAAGLAVLETIDRD--DLPAMAERKGRLLRDG 335 (439)
T ss_dssp CCCSEEEECGGGG-TTSCCEEEEE-EHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHHT--THHHHHHHHHHHHHHH
T ss_pred CCCCEEEEcchhc-CCcceEEEEE-CHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHH
Confidence 1122339999999 7999999999 78988888765444566 8899999988888744321 4444444444444444
Q ss_pred HHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccC--------Cch---HHHHHHHHhhCeeeeCCCCCCCCCCeE
Q 018172 258 LRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLES--------KED---EDCEKLLRAERIMARGGRRFGADAKYA 326 (360)
Q Consensus 258 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~ 326 (360)
+.+.+..++.+.... +.++|+|+.+ ++. ..+.+.|.++||.++|+..+ .+++
T Consensus 336 l~~~~~~~~~~~~~~--------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~---~~~i 398 (439)
T 3dxv_A 336 LSELAKRHPLIGDIR--------------GRGLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGMN---GNVL 398 (439)
T ss_dssp HHHHHHHCTTEEEEE--------------EETTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEESTT---SCEE
T ss_pred HHHHHHhCCCeEEEE--------------EEEEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCCC---CCEE
Confidence 444444444332222 2334666655 232 55677778889999997533 4699
Q ss_pred EEEec--CChHHHHHHHHHHHHHHhchh
Q 018172 327 RVSML--SREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 327 R~s~~--~~~e~~~~~~~~l~~~~~~~~ 352 (360)
||+++ .++|++++++++|++++.+..
T Consensus 399 Ri~~~~~~t~e~i~~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 399 EFTPPLTITETDIHKALDLLDRAFSELS 426 (439)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 99764 389999999999999998764
No 171
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.93 E-value=4.3e-25 Score=210.08 Aligned_cols=281 Identities=10% Similarity=0.020 Sum_probs=185.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC--CCCCCCceEEEeCCCCCCcHHHHHHhCC-------
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS--PGGPEPISVVSAAPYYSQYPAETDYLRS------- 109 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~--~gd~~~~~vl~~~p~~~~~~~~~~~~g~------- 109 (360)
.+|++.++++++ ..++|++|+|+++++..++..+.. +++. |++.+|+|..+...+...+.
T Consensus 98 ~~l~~~la~~~~-------~~~~v~~~~sGsea~~~ai~~a~~~~~~~~----vi~~~~~yhg~~~~~~~~~g~~~~~~~ 166 (434)
T 3l44_A 98 VKFAKMLKEAMP-------ALDKVRFVNSGTEAVMTTIRVARAYTGRTK----IMKFAGCYHGHSDLVLVAAGSGPSTLG 166 (434)
T ss_dssp HHHHHHHHHHCT-------TCSEEEEESSHHHHHHHHHHHHHHHHCCCE----EEEETTCCCCSSGGGGBC-------CC
T ss_pred HHHHHHHHHhCC-------CCCEEEEeCchHHHHHHHHHHHHHhhCCCE----EEEEcCccCCCcHHHHhhcCCcccccC
Confidence 566666666654 245899999999999999988754 5566 99999999887654433221
Q ss_pred -------------eeeeecC-Ccccccc-----CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeeccc
Q 018172 110 -------------GLYKWDG-DANTFDK-----NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYY 165 (360)
Q Consensus 110 -------------~~~~~~~-~~~~~~~-----~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~ 165 (360)
++..++. |.+.++. .+++++|+++.++|++|.+.+ +.+.++|+++|+++|+||+|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~ 246 (434)
T 3l44_A 167 TPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVIT 246 (434)
T ss_dssp CBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTT
T ss_pred CCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 2222322 2233322 134566666666667777764 567889999999999999998
Q ss_pred CCCCCcCC--CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHH---HhhccccCChHHHHHHHHHhcccCCCc
Q 018172 166 WPQYTPIT--GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRF---IELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 166 ~~~~~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
+....... ...+...-+.||||.++ +|+|+||+++ ++++++.+.+. ....+++.|++++.++.++++.+.+.
T Consensus 247 g~~~g~~~~~~~~~~~~di~t~sK~~~-~G~~iG~~~~-~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~- 323 (434)
T 3l44_A 247 AFRFMYGGAQDLLGVTPDLTALGKVIG-GGLPIGAYGG-KKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQE- 323 (434)
T ss_dssp TTTSSSSCHHHHHTCCCSEEEEEGGGG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTST-
T ss_pred ceeccccHHHHHcCCCCCeeehhhhhc-CCcCeeeEEE-cHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcc-
Confidence 53111110 11111122568999999 8999999988 89998887652 23356789999999999988865442
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccC-------------Cch---HHHHH
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLES-------------KED---EDCEK 304 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~---~~~~~ 304 (360)
...++.++.....++.+.+.+..++...... +.++|+++.+ ++. ..+.+
T Consensus 324 -~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (434)
T 3l44_A 324 -GLYEKLDELGATLEKGILEQAAKHNIDITLN--------------RLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFK 388 (434)
T ss_dssp -THHHHHHHHHHHHHHHHHHHHHHTTCCEEEE--------------EETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHH
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEE--------------eeccEEEEEEecCcccchhhccccCHHHHHHHHH
Confidence 5555555555555555555444443322111 2233445543 121 45677
Q ss_pred HHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhchhc
Q 018172 305 LLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 305 ~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~~ 353 (360)
.|.++||.++|+. .+++|+++..++|++++++++|++++.+.++
T Consensus 389 ~l~~~Gv~v~~~~-----~~~~rl~~~~t~e~i~~~l~~l~~~l~~~~~ 432 (434)
T 3l44_A 389 LMLQEGVNLAPSK-----YEAWFLTTEHTKEDIEYTIEAVGRAFAALAD 432 (434)
T ss_dssp HHHHTTEECCSST-----TCCEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCeEEeecC-----CCcEEEecccCHHHHHHHHHHHHHHHHHHHh
Confidence 7888999999864 3578998767999999999999999976543
No 172
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.93 E-value=1.4e-24 Score=208.08 Aligned_cols=268 Identities=9% Similarity=-0.002 Sum_probs=187.4
Q ss_pred CCcEEEcCChHHHHHHHHHhhcC-------C-CCCCCceEEEeCCCCCCcHHHHHHhCCe-------------eeeecCC
Q 018172 59 GRHIVIGTGSTQLYQAALYALSS-------P-GGPEPISVVSAAPYYSQYPAETDYLRSG-------------LYKWDGD 117 (360)
Q Consensus 59 ~~~i~~t~G~t~~l~~~~~~l~~-------~-gd~~~~~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~ 117 (360)
.++|++|+|+++++..+++.+.+ + ++. |++.+|+|..+...+..++.. +..++..
T Consensus 112 ~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~----vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 187 (460)
T 3gju_A 112 MSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKK----IISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAP 187 (460)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCE----EEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCC
T ss_pred cCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCE----EEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCC
Confidence 35899999999999999998864 3 454 999999999887666554322 2233311
Q ss_pred c-------------------ccccc------CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC
Q 018172 118 A-------------------NTFDK------NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP 167 (360)
Q Consensus 118 ~-------------------~~~~~------~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~ 167 (360)
. +.++. .+++++|+++.++|++|...+ +.+.++|+++|+++|+||+|.+.
T Consensus 188 ~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~ 267 (460)
T 3gju_A 188 YYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGF 267 (460)
T ss_dssp CGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred ccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 1 12211 145677777777778887543 46778999999999999999843
Q ss_pred CCCc-CC--CCCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHH-------HhhccccCChHHHHHHHHHhccc
Q 018172 168 QYTP-IT--GAADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRF-------IELGSIGVSKESQLRAAKILGIV 236 (360)
Q Consensus 168 ~~~~-~~--~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~ 236 (360)
.... .. ...+...-+.+|||+++ .| +|+||+++ ++++++.+... ....+++.|+++|.++.++++.+
T Consensus 268 gr~g~~~~~~~~~~~pdi~t~sK~l~-gG~~~lg~v~~-~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~ 345 (460)
T 3gju_A 268 GRLGTMFGSDHYGIKPDLITIAKGLT-SAYAPLSGVIV-ADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELI 345 (460)
T ss_dssp TTTSSSCHHHHHTCCCSEEEECGGGT-TTSSCCEEEEE-EHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHH
T ss_pred CcccccchHhhcCCCCCeeeeehhhc-CCCCCeEEEEE-CHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHH
Confidence 2111 11 11112222457899998 56 89999999 89999998643 33457789999999999988865
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--------------hHHH
Q 018172 237 SDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--------------DEDC 302 (360)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~ 302 (360)
.+. ..+++.++..+..++.+.+.+.+++.+....+.|. |+++.+.+ ...+
T Consensus 346 ~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (460)
T 3gju_A 346 DEM--DLVTNAGETGAYFRAELAKAVGGHKNVGEVRGDGM--------------LAAVEFVADKDDRVFFDASQKIGPQV 409 (460)
T ss_dssp HHT--THHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETT--------------EEEEEECSBTTTTBCCCGGGCHHHHH
T ss_pred Hhc--cHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeeE--------------EEEEEEccCccccccccchHHHHHHH
Confidence 433 67777888888888888788877764443333333 33443321 1457
Q ss_pred HHHHHhhCeeeeCCCCCCCCCCeEEEEe--cCChHHHHHHHHHHHHHHhchh
Q 018172 303 EKLLRAERIMARGGRRFGADAKYARVSM--LSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 303 ~~~l~~~gI~~~pg~~f~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
.+.|.++||.++|+. ..+++||++ ..++|++++++++|++++.+..
T Consensus 410 ~~~l~~~Gv~v~~~~----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 457 (460)
T 3gju_A 410 ATALAASGVIGRAMP----QGDILGFAPPLCLTREQADIVVSKTADAVKSVF 457 (460)
T ss_dssp HHHHHHTTEECEECS----SSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCeEEecCC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 778888999999965 257999994 4599999999999999987643
No 173
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.92 E-value=6.5e-25 Score=209.98 Aligned_cols=283 Identities=13% Similarity=0.094 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC--CCCCCCceEEEeCCCCCCcHHHHHHhCC-------
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS--PGGPEPISVVSAAPYYSQYPAETDYLRS------- 109 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~--~gd~~~~~vl~~~p~~~~~~~~~~~~g~------- 109 (360)
.+|++.++++++. ...++|++|+|+++++..+++.+.. .++. |++.+++|..+...+..++.
T Consensus 110 ~~la~~l~~~~~~-----~~~~~v~~~~sGseA~~~alk~a~~~~g~~~----ii~~~~~yhg~~~~~~~~~~~~~~~~~ 180 (453)
T 4ffc_A 110 VQVAELLNALTPG-----DHDKRTALFNSGAEAVENAIKVARLATGRPA----VVAFDNAYHGRTNLTMALTAKSMPYKS 180 (453)
T ss_dssp HHHHHHHHHHSSC-----SSCEEEEEESSHHHHHHHHHHHHHHHHCCCE----EEEETTCCCCSSHHHHHHCCCCTTTTT
T ss_pred HHHHHHHHHhCCC-----CCCcEEEEeCcHHHHHHHHHHHHHHhcCCCE----EEEEcCccCCcchHHHhhcCCCccccc
Confidence 4444555544431 1235899999999999999987753 3344 99999999988776655533
Q ss_pred -------eeeeecCC-----c-------------ccccc--CCCeeEEEEcCCCCCCc-cc-ch----HHHHHHhhhcCc
Q 018172 110 -------GLYKWDGD-----A-------------NTFDK--NNGAYIEVVNSPNNPDG-TI-RE----AVLAKVNRSAEG 156 (360)
Q Consensus 110 -------~~~~~~~~-----~-------------~~~~~--~~~~~~i~~~~p~NPtG-~~-~~----~~~~~~~~~~~~ 156 (360)
.+..++.+ . +.++. .+++.++++..|+|++| .+ .+ +.+.++|+++|+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~ 260 (453)
T 4ffc_A 181 QFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGV 260 (453)
T ss_dssp TSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTC
T ss_pred CCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCC
Confidence 22333322 1 11111 24567777788888766 33 33 467788999999
Q ss_pred EEEEeecccCCCCC-cCC--CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHh
Q 018172 157 KLIHDLAYYWPQYT-PIT--GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKIL 233 (360)
Q Consensus 157 ~li~D~ay~~~~~~-~~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l 233 (360)
++|+||+|.+.... ... ...+....+.||||.++ .|+|+||+++ ++++++.+.......+++.|+++|.++.+++
T Consensus 261 llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~sK~~~-~G~~~G~~~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal 338 (453)
T 4ffc_A 261 VFIADEVQTGFARTGAWFASEHEGIVPDIVTMAKGIA-GGMPLSAVTG-RAELMDAVYAGGLGGTYGGNPVTCAAAVAAL 338 (453)
T ss_dssp EEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGG-TTSSCEEEEE-EHHHHTTSCTTSSCCSSSSCHHHHHHHHHHH
T ss_pred EEEEecCccCCCcccccchhhhcCCCcchHhhhhhhc-CCcCeEEEEE-CHHHHhhhcccCcCCCCCcCHHHHHHHHHHH
Confidence 99999999853211 111 11222333568999999 4999999998 8999988876666678889999999999988
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-------ch---HHHH
Q 018172 234 GIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-------ED---EDCE 303 (360)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~ 303 (360)
+.+.+. ...++.++.....++.+.+.+.+++.+.... +.++|+|+.+. +. ..+.
T Consensus 339 ~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ 402 (453)
T 4ffc_A 339 GVMREL--DLPARARAIEASVTSRLSALAEEVDIIGEVR--------------GRGAMLAIEIVKPGTLEPDAALTKSIA 402 (453)
T ss_dssp HHHHHT--THHHHHHHHHHHHHHHHHHHHHHCSSEEEEE--------------EETTEEEEEEBCTTSCCBCHHHHHHHH
T ss_pred HHhhhh--hHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE--------------eeceEEEEEEecCcccCCCHHHHHHHH
Confidence 754332 5555555555555566666556665433222 22335666552 22 5677
Q ss_pred HHHHhhCeeeeCCCCCCCCCCeEEEEecC--ChHHHHHHHHHHHHHHhch
Q 018172 304 KLLRAERIMARGGRRFGADAKYARVSMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 304 ~~l~~~gI~~~pg~~f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
+.|.++||.++|+..|+ +++||+++. ++|++++++++|.+++.+.
T Consensus 403 ~~l~~~Gv~v~~~~~~~---~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 449 (453)
T 4ffc_A 403 AEALSQGVLILTCGTFG---NVIRLLPPLVIGDDLLDEGITALSDIIRAK 449 (453)
T ss_dssp HHHHHTTEECCEECTTS---CEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCEEecCCCCC---CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 78889999999976553 589997643 8999999999999999764
No 174
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.92 E-value=3.4e-23 Score=196.03 Aligned_cols=290 Identities=12% Similarity=0.068 Sum_probs=198.6
Q ss_pred ccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHHHH
Q 018172 27 LSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAETD 105 (360)
Q Consensus 27 y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~~ 105 (360)
|++..|.+ ....++++.++++++. + ++++++|+++++..++..+ +++||+ |+++.|+|..+...++
T Consensus 34 ~~~~~g~~-~l~~~l~~~la~~~g~-------~-~~i~~~~gt~al~~~~~~~~~~~gd~----Vl~~~~~~~~~~~~~~ 100 (418)
T 2c81_A 34 SGYWTGEE-SMERKFAKAFADFNGV-------P-YCVPTTSGSTALMLALEALGIGEGDE----VIVPSLTWIATATAVL 100 (418)
T ss_dssp TSBCCSSC-CHHHHHHHHHHHHHTC-------S-EEEEESCHHHHHHHHHHHTTCCTTCE----EEEESSSCTHHHHHHH
T ss_pred cCcccCCH-HHHHHHHHHHHHHhCC-------C-cEEEeCCHHHHHHHHHHHcCCCCcCE----EEECCCccHhHHHHHH
Confidence 55555520 0128888889988885 2 4666777789999999999 889998 9999999999999999
Q ss_pred HhCCeeeeecCCcccc--cc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC-CCcC-C
Q 018172 106 YLRSGLYKWDGDANTF--DK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ-YTPI-T 173 (360)
Q Consensus 106 ~~g~~~~~~~~~~~~~--~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~-~~~~-~ 173 (360)
..|++++.++.+.+.+ +. ++++++|++ +||||...+ +.+.++|+++|+++|+|++|..+. +... .
T Consensus 101 ~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~---~~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~ 177 (418)
T 2c81_A 101 NVNALPVFVDVEADTYCIDPQLIKSAITDKTKAIIP---VHLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRA 177 (418)
T ss_dssp HTTCEEEEECBCTTTCSBCHHHHGGGCCTTEEEECC---BCCTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEET
T ss_pred HcCCEEEEEecCCCCCCcCHHHHHHhhCCCCeEEEE---eCCcCCcccHHHHHHHHHHCCCEEEEECcccccCccCCEec
Confidence 9999999988764322 11 357888885 458998877 678888988999999999998654 2111 1
Q ss_pred CCCCccEEEecc--ccccCCCCceEEEEeecCHHHHHHHHHHHhhccc------------c--C---C--------hHHH
Q 018172 174 GAADHDIMLFTL--SKCTGHAGSRIGWALVKDTEVARKMTRFIELGSI------------G--V---S--------KESQ 226 (360)
Q Consensus 174 ~~~~~~i~~~S~--sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~------------~--~---~--------~~~~ 226 (360)
... .++.+.|| ||.++. | |+||++++++++++.+......... . . . ...+
T Consensus 178 ~~~-~~~~~~s~s~~K~~~~-g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 254 (418)
T 2c81_A 178 GTI-GDIGAFSCQQGKVLTA-G-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQ 254 (418)
T ss_dssp TSS-SSEEEEECCTTSSSCS-S-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHH
T ss_pred ccc-cceEEEeccCCcccCC-C-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHH
Confidence 111 24777777 999995 8 9999998558888888766543211 1 0 0 1111
Q ss_pred HHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccC-CCCC-cccccccccCCCCCCcccccCC-------
Q 018172 227 LRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLP-EYPL-EYCNFTGKFTNSHPGFAWLESK------- 297 (360)
Q Consensus 227 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~------- 297 (360)
.++. +..+ +.+++..++.+++++++.+.|++++++.+. .+.+ +...|. .+.+.++
T Consensus 255 aa~~--~~~l-----~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ 318 (418)
T 2c81_A 255 SAIL--LDQL-----QELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYY---------GYVFRFDPVKFGGL 318 (418)
T ss_dssp HHHH--HHHH-----TTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCS---------EEEEEECGGGTTTC
T ss_pred HHHH--HHHH-----HHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccE---------EEEEEEcccccccc
Confidence 1111 1111 345667777778888999999888666665 2333 221110 1114444
Q ss_pred chHHHHHHHHhh-Cee---eeCCCCC----------------------------CCC-------CCeEEEEec--C-ChH
Q 018172 298 EDEDCEKLLRAE-RIM---ARGGRRF----------------------------GAD-------AKYARVSML--S-REE 335 (360)
Q Consensus 298 ~~~~~~~~l~~~-gI~---~~pg~~f----------------------------~~~-------~~~~R~s~~--~-~~e 335 (360)
+.+.+.+.|.++ ||. +.+|... +.. .+.+|+++. . ++|
T Consensus 319 ~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~e 398 (418)
T 2c81_A 319 NADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPS 398 (418)
T ss_dssp CHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHH
T ss_pred CHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHH
Confidence 236777778788 999 8887511 000 147999985 3 899
Q ss_pred HHHHHHHHHHHHHhch
Q 018172 336 IFNIFLERLSAIQGGS 351 (360)
Q Consensus 336 ~~~~~~~~l~~~~~~~ 351 (360)
|+++++++|++++++.
T Consensus 399 di~~~~~~l~~~~~~~ 414 (418)
T 2c81_A 399 HLSLLVDAVAELARKF 414 (418)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998764
No 175
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.92 E-value=3.8e-24 Score=204.56 Aligned_cols=266 Identities=14% Similarity=0.071 Sum_probs=181.0
Q ss_pred CcEEEcCChHHHHHHHHHhhcC-CC-CCCCceEEEeCCCCCCcHHHHHHhCC--------------eeeeecCCc-----
Q 018172 60 RHIVIGTGSTQLYQAALYALSS-PG-GPEPISVVSAAPYYSQYPAETDYLRS--------------GLYKWDGDA----- 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~-~g-d~~~~~vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~----- 118 (360)
++|++|+|+++++..+++.+.. +| +. |++.+++|+.+...+..++. .+..++.+.
T Consensus 123 ~~v~~~~sGseA~~~Alk~a~~~~g~~~----ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (451)
T 3oks_A 123 KRSALFNSGSEAVENAVKIARSHTHKPA----VVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDA 198 (451)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHCCCE----EEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHG
T ss_pred CEEEEeCcHHHHHHHHHHHHHHhcCCCe----EEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccc
Confidence 5899999999999999987754 34 44 99999999988766655432 233333320
Q ss_pred -----------cccc-------c--CCCeeEEEEcCCCCCCc-ccch-----HHHHHHhhhcCcEEEEeecccCCCCC-c
Q 018172 119 -----------NTFD-------K--NNGAYIEVVNSPNNPDG-TIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYT-P 171 (360)
Q Consensus 119 -----------~~~~-------~--~~~~~~i~~~~p~NPtG-~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~-~ 171 (360)
+.++ . .+++.++++..|+|++| .+.+ +.+.++|+++|+++|+||+|.+.... .
T Consensus 199 ~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~ 278 (451)
T 3oks_A 199 EFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGA 278 (451)
T ss_dssp GGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS
T ss_pred ccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCcccc
Confidence 0111 0 22456666667766654 4433 46778899999999999999843211 1
Q ss_pred C--CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHH
Q 018172 172 I--TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRR 249 (360)
Q Consensus 172 ~--~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 249 (360)
. ....+...-+.||||.++ .|+|+||+++ ++++++.+.......+++.|+++|.++.++++.+.+. ...++.++
T Consensus 279 ~~~~~~~~~~pdi~t~sK~l~-~G~~iG~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~--~~~~~~~~ 354 (451)
T 3oks_A 279 MFACEHEGIDPDLIVTAKGIA-GGLPLSAVTG-RAEIMDSPHVSGLGGTYGGNPIACAAALATIETIESE--GLVARAQQ 354 (451)
T ss_dssp SSGGGGGTCCCSEEEECGGGG-TTSSCEEEEE-EHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHT--THHHHHHH
T ss_pred chhhhhcCCCCCeeeehhhhh-CCcceEEEEE-CHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhh--hHHHHHHH
Confidence 1 112222222448999999 5999999998 8999988876666678889999999999988754332 45555555
Q ss_pred HHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccC-------Cch---HHHHHHHHhhCeeeeCCCCC
Q 018172 250 LMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLES-------KED---EDCEKLLRAERIMARGGRRF 319 (360)
Q Consensus 250 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---~~~~~~l~~~gI~~~pg~~f 319 (360)
.....++.+.+.+.+++.+.... +.+.|+|+.+ ++. ..+.+.|.++||.++|+..|
T Consensus 355 ~~~~l~~~L~~~~~~~~~~~~~~--------------~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~ 420 (451)
T 3oks_A 355 IEKIMKDRLGRLQAEDDRIGDVR--------------GRGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGTY 420 (451)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEE--------------EETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECTT
T ss_pred HHHHHHHHHHHHHhhCCCeEEEE--------------EeeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCCC
Confidence 55555555555555555333222 2233556655 222 56777888999999997655
Q ss_pred CCCCCeEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 320 GADAKYARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 320 ~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
+ +++||+++. ++|++++++++|++++.+
T Consensus 421 ~---~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 421 G---NVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp S---CEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred C---CEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 4 589997643 899999999999999864
No 176
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.92 E-value=5.3e-24 Score=205.16 Aligned_cols=281 Identities=14% Similarity=0.066 Sum_probs=193.1
Q ss_pred HHHH----HHHHHHHhhcCCCCCC-CCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH--------HHH
Q 018172 39 PELA----EAINNLHHVVDNAVSD-GRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA--------ETD 105 (360)
Q Consensus 39 ~~lr----~~la~~~~~~~~~~~~-~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~--------~~~ 105 (360)
.+++ +.+++++|. +.+. ..+|++++|+ +++..++.+++++||+ |++++|+|.++.. .+.
T Consensus 89 ~~le~~~~~~~a~~~g~---~~~~~~~~V~~~sGs-~an~~~~~all~pGD~----Vl~~~~~~~~~~~~~~~~~~~~v~ 160 (483)
T 1rv3_A 89 DELETLCQKRALQAYGL---DPQCWGVNVQPYSGS-PANFAVYTALVEPHGR----IMGLDLPDGGHLTHGFMTDKKKIS 160 (483)
T ss_dssp HHHHHHHHHHHHHHTTC---CTTTEEEECCCSSHH-HHHHHHHHHHTCTTCE----EEEECGGGTCCGGGCCBCSSCBCS
T ss_pred HHHHHHHHHHHHHHhCC---CcccCceEEEECCcH-HHHHHHHHHhcCCCCE----EEEecCccCcCcchhhhhcccCcc
Confidence 5555 555566664 1110 0248888887 8888889999999998 9999999988864 234
Q ss_pred HhC--CeeeeecCCcccccc---------C-CCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCC-----
Q 018172 106 YLR--SGLYKWDGDANTFDK---------N-NGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWP----- 167 (360)
Q Consensus 106 ~~g--~~~~~~~~~~~~~~~---------~-~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~----- 167 (360)
..| .+++.++++.+.... . +++|+|++ +++||+ .+++ +.+.++|+++|+++++|++|..+
T Consensus 161 ~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~ 238 (483)
T 1rv3_A 161 ATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAG 238 (483)
T ss_dssp HHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHT
T ss_pred cccceEEEEECccccCCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccC
Confidence 445 555555444322211 2 57899999 899988 6667 78888999999999999998721
Q ss_pred -CCCcCCCCCCccEEEeccccccCCCCceEEEEeecCH--------------HHHHHHHHHHhhc-cccCChHHHHHHHH
Q 018172 168 -QYTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDT--------------EVARKMTRFIELG-SIGVSKESQLRAAK 231 (360)
Q Consensus 168 -~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~--------------~~~~~l~~~~~~~-~~~~~~~~~~~~~~ 231 (360)
...++. ..+++++|+||.+ +|.|.||++++++ ++.+.+....... ..+.+...+.++..
T Consensus 239 ~~~~p~~---~~div~~s~~K~l--~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~ 313 (483)
T 1rv3_A 239 VVPSPFE---HCHVVTTTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAV 313 (483)
T ss_dssp SSCCGGG---TCSEEEEESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHH
T ss_pred CCCCCCC---CCcEEEecCcccC--CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHH
Confidence 111221 4679999999987 5788899999543 2444454332211 22344444445555
Q ss_pred HhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC----chHHHHHHHH
Q 018172 232 ILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK----EDEDCEKLLR 307 (360)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~ 307 (360)
+++.... ..+++.++++.++++++.+.|.++ ++.+..+... ..++|+++. +...+.+.|.
T Consensus 314 Al~~~~~---~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~------------~~~~~v~~~~~g~~~~~~~~~L~ 377 (483)
T 1rv3_A 314 ALKQAMT---PEFKEYQRQVVANCRALSAALVEL-GYKIVTGGSD------------NHLILVDLRSKGTDGGRAEKVLE 377 (483)
T ss_dssp HHHHHTS---HHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCS------------SSEEEEEGGGGTCCHHHHHHHHH
T ss_pred HHHHHhC---hhHHHHHHHHHHHHHHHHHHHHhc-CCEeccCCCC------------CceEEEeccCCCCCHHHHHHHHH
Confidence 6664432 567889999999999999999988 5555433111 114555553 2367888899
Q ss_pred hhCeeee----CCCCCCCCCCeEEEEecC--C----hHHHHHHHHHHHHHHhc
Q 018172 308 AERIMAR----GGRRFGADAKYARVSMLS--R----EEIFNIFLERLSAIQGG 350 (360)
Q Consensus 308 ~~gI~~~----pg~~f~~~~~~~R~s~~~--~----~e~~~~~~~~l~~~~~~ 350 (360)
+.||.+. ||......++++|||+.. + ++++++++++|.+++..
T Consensus 378 ~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 378 ACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp HTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred hCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 9999999 887432246799999965 5 89999999999999875
No 177
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.92 E-value=1.2e-23 Score=199.09 Aligned_cols=287 Identities=14% Similarity=0.075 Sum_probs=189.6
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH----HHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA----ETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~----~~~~~g~~~~~ 113 (360)
..+|+++++++++. ++ .++++++++++..++..++++||+ |+++.|+|..+.. .++..|++++.
T Consensus 84 ~~~le~~lA~l~g~-------~~-~v~~~sG~~Ai~~al~al~~~Gd~----Vi~~~~~y~~~~~~~~~~~~~~G~~~~~ 151 (430)
T 3ri6_A 84 VEDLEQRLKNLTGA-------LG-VLALGSGMAAISTAILTLARAGDS----VVTTDRLFGHTLSLFQKTLPSFGIEVRF 151 (430)
T ss_dssp HHHHHHHHHHHHTC-------SE-EEEESCHHHHHHHHHHHHCCTTCE----EEEETTCCHHHHHHHHTHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCC-------Cc-EEEECCHHHHHHHHHHHHhCCCCE----EEEcCCCchhHHHHHHHHHHHcCCEEEE
Confidence 48999999999984 33 455556679999999999999998 9999999998887 66778999999
Q ss_pred ecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEecccccc
Q 018172 114 WDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLSKCT 189 (360)
Q Consensus 114 ~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~sK~~ 189 (360)
++.+ .+.+.. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+.. ..+...+.++++.|+||.+
T Consensus 152 v~~~d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~-~~~~~~g~div~~S~sK~l 230 (430)
T 3ri6_A 152 VDVMDSLAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYL-LEAKRLGVDIEVLSSTKFI 230 (430)
T ss_dssp ECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTT-CCGGGGTCSEEEEECCCEE
T ss_pred eCCCCHHHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-CChHHcCCEEEEECCcccc
Confidence 9865 334432 568999999999999999998 6788899999999999999986433 1122445789999999999
Q ss_pred CCCCceEEEEee--cCHH------------------HHHHHHH-HHhhccccCChHHHHHHHHHhcccCCCchhHHHHHH
Q 018172 190 GHAGSRIGWALV--KDTE------------------VARKMTR-FIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGR 248 (360)
Q Consensus 190 ~~~G~r~G~~~~--~~~~------------------~~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 248 (360)
+.+|..+|.+++ .+.. +++.+.. .....+...++.....+...+ +.+....
T Consensus 231 ~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l--------~~l~~r~ 302 (430)
T 3ri6_A 231 SGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGL--------ETMALRI 302 (430)
T ss_dssp ETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHH--------HHHHHHH
T ss_pred cCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhh--------hhHHHHH
Confidence 866655555554 2311 1233322 112223334444433333322 3344445
Q ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCcc----cccccccCCCCCC-cccccCCchHH---HHHHHHhhCeeeeCCCCCC
Q 018172 249 RLMSERWNMLRQVIRQSGVFGLPEYPLEY----CNFTGKFTNSHPG-FAWLESKEDED---CEKLLRAERIMARGGRRFG 320 (360)
Q Consensus 249 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~l~~~gI~~~pg~~f~ 320 (360)
++..++.+.+.+.|++++.+..+.+++.. +....... +.+. ++|+.+++.+. +.+.|+-.++.+.+|..+.
T Consensus 303 ~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~-g~Gg~~lsf~l~~~~~~~~~~~~l~~~~~~~s~G~~~s 381 (430)
T 3ri6_A 303 ERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQF-RYAGSILTFELESKEASYRFMDALKLIRRATNIHDNKS 381 (430)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHC-SSCCSEEEEECSSHHHHHHHHHHCSSSEECSCCSCSSC
T ss_pred HHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhC-CCCceEEEEEECCHHHHHHHHHhCCcceecCCCCCCCc
Confidence 56678888999999988766643333210 00000011 3355 78999985433 4444444566666775443
Q ss_pred ----------------------CCCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 321 ----------------------ADAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 321 ----------------------~~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
..++++|+|++. |+.+.+++.|++.+
T Consensus 382 li~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~--E~~~dl~~dl~~al 429 (430)
T 3ri6_A 382 LILSPYHVIYALNSHEERLKLEISPAMMRLSVGI--EEIEDLKEDILQAL 429 (430)
T ss_dssp EEECTGGGC---------CGGGSCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred eeeCCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHhh
Confidence 246789999965 23344555555544
No 178
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.92 E-value=1.3e-24 Score=208.37 Aligned_cols=267 Identities=10% Similarity=-0.015 Sum_probs=179.1
Q ss_pred CCcEEEcCChHHHHHHHHHhhcC--------CCCCCCceEEEeCCCCCCcHHHHHHhCCe-------------eeeec--
Q 018172 59 GRHIVIGTGSTQLYQAALYALSS--------PGGPEPISVVSAAPYYSQYPAETDYLRSG-------------LYKWD-- 115 (360)
Q Consensus 59 ~~~i~~t~G~t~~l~~~~~~l~~--------~gd~~~~~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~-- 115 (360)
.++|++|+|+++++..++..+.+ +++. |++.+|+|..+...+...+.. +..++
T Consensus 111 ~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~----vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 186 (459)
T 4a6r_A 111 FDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKT----LIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQP 186 (459)
T ss_dssp CCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCE----EEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCC
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCE----EEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCC
Confidence 45899999999999999999875 3454 999999999988766665332 22222
Q ss_pred C--------C--------cccccc-----C-CCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCC
Q 018172 116 G--------D--------ANTFDK-----N-NGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQ 168 (360)
Q Consensus 116 ~--------~--------~~~~~~-----~-~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~ 168 (360)
. | .+.++. . +++++|+++.++|++|.+.+ +.+.++|+++|+++|+||+|.+..
T Consensus 187 ~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g 266 (459)
T 4a6r_A 187 WWYKHGKDMTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFG 266 (459)
T ss_dssp CHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTT
T ss_pred ccccCCcccCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 1 1 112211 1 34455555555566777653 567889999999999999998532
Q ss_pred CCc-CC--CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHH---HHHhhccccCChHHHHHHHHHhcccCCCchh
Q 018172 169 YTP-IT--GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMT---RFIELGSIGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 169 ~~~-~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
... .. ...+...-+.+|||.++..|+|+||+++ ++++++.+. ......+++.|+++|.++.++|+.+.+. .
T Consensus 267 r~G~~~~~~~~~~~pdi~t~sK~l~gg~~~lg~v~~-~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~--~ 343 (459)
T 4a6r_A 267 RTGEWFGHQHFGFQPDLFTAAKGLSSGYLPIGAVFV-GKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDE--G 343 (459)
T ss_dssp TTSSSSHHHHHTCCCSEEEECGGGGTTSSCCEEEEE-CHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHT--C
T ss_pred cccccchHhhcCCCCCeeehhhhhcCCCCCccceee-CHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcc--h
Confidence 111 11 1111111244788999844499999999 899999987 3344457889999999999988854332 5
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--------------hHHHHHHHH
Q 018172 243 FFEYGR-RLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--------------DEDCEKLLR 307 (360)
Q Consensus 243 ~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~l~ 307 (360)
.+++.+ +.....++.+.+.|.+++.+....+.|. |+++.+.+ ...+.+.|.
T Consensus 344 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 409 (459)
T 4a6r_A 344 IVQRVKDDIGPYMQKRWRETFSRFEHVDDVRGVGM--------------VQAFTLVKNKAKRELFPDFGEIGTLCRDIFF 409 (459)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEETT--------------EEEEEECSBTTTTBCCSSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEE--------------EEEEEEecCccccccccchHHHHHHHHHHHH
Confidence 566666 5555555666566665554333333333 44443321 245677788
Q ss_pred hhCeeeeCCCCCCCCCCeEEEEe--cCChHHHHHHHHHHHHHHhchh
Q 018172 308 AERIMARGGRRFGADAKYARVSM--LSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 308 ~~gI~~~pg~~f~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
++||.++|+. +++||++ ..++|++++++++|++++.+..
T Consensus 410 ~~Gv~v~~~g------~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (459)
T 4a6r_A 410 RNNLIMRACG------DHIVSAPPLVMTRAEVDEMLAVAERCLEEFE 450 (459)
T ss_dssp HTTEECEEET------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HCCeEEecCC------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 8899999852 6999994 4599999999999999997653
No 179
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.92 E-value=6.3e-24 Score=203.16 Aligned_cols=273 Identities=14% Similarity=-0.010 Sum_probs=187.4
Q ss_pred cEEEcCChHHHHHHHHHhhcC--------CC---CCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCCcccc--cc----
Q 018172 61 HIVIGTGSTQLYQAALYALSS--------PG---GPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGDANTF--DK---- 123 (360)
Q Consensus 61 ~i~~t~G~t~~l~~~~~~l~~--------~g---d~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~--~~---- 123 (360)
.+++|+|+|+++..++.++.+ +| +. ..|++++ +|..+...++.+|++++.++.+.+.+ +.
T Consensus 105 ~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~--~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~ 181 (452)
T 2dgk_A 105 VGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDK--PNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMI 181 (452)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSC--CEEEESS-CCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHH
T ss_pred ceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCC--cEEEECC-CcHHHHHHHHHcCceEEEEecCCCCCeECHHHHH
Confidence 499999999999999888754 45 21 1399999 99999999999999999998764222 21
Q ss_pred ---CCCeeEEEEcCCCCCCcccch-HHHHHHhhhc------CcEEEEeecccCCCC-------CcCCCCCCccEEEeccc
Q 018172 124 ---NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSA------EGKLIHDLAYYWPQY-------TPITGAADHDIMLFTLS 186 (360)
Q Consensus 124 ---~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~------~~~li~D~ay~~~~~-------~~~~~~~~~~i~~~S~s 186 (360)
+++|++|++++|+||||.+.+ +.+.++|+++ ++++++|++|..... .......+.+.++.|++
T Consensus 182 ~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~h 261 (452)
T 2dgk_A 182 EACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGH 261 (452)
T ss_dssp HHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETT
T ss_pred HHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcc
Confidence 467899999999999999988 7788888874 999999999985321 11112335567888999
Q ss_pred cccCCCCceEEEEeecCHHHH-HHHHHHHhhc---------cccC---ChHHHHHHHHHhcccCCCchhHHHHHHHHHHH
Q 018172 187 KCTGHAGSRIGWALVKDTEVA-RKMTRFIELG---------SIGV---SKESQLRAAKILGIVSDDYPNFFEYGRRLMSE 253 (360)
Q Consensus 187 K~~~~~G~r~G~~~~~~~~~~-~~l~~~~~~~---------~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 253 (360)
| |++.|.++||+++++++++ +.+.....+. ..+. ....+.++...+. ...+++..+++.+
T Consensus 262 K-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg------~~g~~~~~~~~~~ 334 (452)
T 2dgk_A 262 K-FGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG------REGYTKVQNASYQ 334 (452)
T ss_dssp T-TTCCCSSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH------HHHHHHHHHHHHH
T ss_pred c-ccCCCCCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHh------HHHHHHHHHHHHH
Confidence 9 6668899999999555433 3331101110 0111 2233444433332 2667888999999
Q ss_pred HHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-------hHHHHHHHHhhCeeeeCCCCCC-C-CCC
Q 018172 254 RWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-------DEDCEKLLRAERIMARGGRRFG-A-DAK 324 (360)
Q Consensus 254 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~gI~~~pg~~f~-~-~~~ 324 (360)
+++++.+.|++++++.+..+... .+..+++.+.+++ ...+.+.|.++||.++...... . ..+
T Consensus 335 ~a~~l~~~L~~~~~~~~~~~~~~---------~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~ 405 (452)
T 2dgk_A 335 VAAYLADEIAKLGPYEFICTGRP---------DEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIV 405 (452)
T ss_dssp HHHHHHHHHHTTSSEEEEEECCT---------TTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCTTCE
T ss_pred HHHHHHHHHHhCCCeEEecCCCC---------CCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeCCcccCCeE
Confidence 99999999999976666432100 0112244444432 2678888889999765322111 1 245
Q ss_pred eEEEEecC--ChHHHHHHHHHHHHHHhchh
Q 018172 325 YARVSMLS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 325 ~~R~s~~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
++|+++.. ++|++++++++|++++.+.+
T Consensus 406 ~lRis~~~~~t~e~id~li~~l~~~~~~~~ 435 (452)
T 2dgk_A 406 VMRIMCRRGFEMDFAELLLEDYKASLKYLS 435 (452)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999966 78999999999999987543
No 180
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.92 E-value=7.3e-23 Score=193.73 Aligned_cols=277 Identities=16% Similarity=0.121 Sum_probs=180.1
Q ss_pred HHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCC---cHHHHHHhCC--eeeeecCC
Q 018172 43 EAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQ---YPAETDYLRS--GLYKWDGD 117 (360)
Q Consensus 43 ~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~---~~~~~~~~g~--~~~~~~~~ 117 (360)
+.++++++. +...++++|+++++..++..++++||+ |+++.|+|.. +.......|. +++.++.+
T Consensus 85 ~~~~~~~~~-------~~~~v~~~~Gs~a~~~al~~~~~~gd~----Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 153 (425)
T 3ecd_A 85 ERVKRLFNA-------GHANVQPHSGAQANGAVMLALAKPGDT----VLGMSLDAGGHLTHGAKPALSGKWFNALQYGVS 153 (425)
T ss_dssp HHHHHHHTC-------SEEECCCSSHHHHHHHHHHHHCCTTCE----EEEECC------------------CEEEEECCC
T ss_pred HHHHHHhCC-------CCceeecCchHHHHHHHHHHccCCCCE----EEEcccccccceecchhhhhcccceeeeecCCC
Confidence 445666764 223355888899999999999999998 9999999988 2222223454 44555544
Q ss_pred cc--cccc--------CCCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecccC-----CCCCcCCCCCCccEEE
Q 018172 118 AN--TFDK--------NNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYW-----PQYTPITGAADHDIML 182 (360)
Q Consensus 118 ~~--~~~~--------~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay~~-----~~~~~~~~~~~~~i~~ 182 (360)
.+ .++. .+++++|++++|+||+-..+ +.+.++|+++|+++|+|++|.. +..... ....++++
T Consensus 154 ~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l-~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~--~~~~di~~ 230 (425)
T 3ecd_A 154 RDTMLIDYDQVEALAQQHKPSLIIAGFSAYPRKLDF-ARFRAIADSVGAKLMVDMAHIAGVIAAGRHANP--VEHAHVVT 230 (425)
T ss_dssp TTTSSCCHHHHHHHHHHHCCSEEEEECSCCCSCCCH-HHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCG--GGTCSEEE
T ss_pred cccCccCHHHHHHHHhhcCCcEEEEccccCCCcCCH-HHHHHHHHHcCCEEEEECcChHhhhhcccccCc--hhcCcEEE
Confidence 32 2221 24789999999999865444 5677788889999999999642 111111 11246899
Q ss_pred eccccccCCCCceEEEEeecCHHHHHHHHHHHhhccc-cCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHH
Q 018172 183 FTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSI-GVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQV 261 (360)
Q Consensus 183 ~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 261 (360)
.|+||.+ +|.|+||++++++++.+.+......... +.+...+.++..++.... ..++++.+++++++++++.+.
T Consensus 231 ~s~sK~l--~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~---~~~~~~~~~~~~~~~~~l~~~ 305 (425)
T 3ecd_A 231 STTHKTL--RGPRGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEAL---TDDFKTYIDRVLANAQALGDV 305 (425)
T ss_dssp EESSGGG--CCCSCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHT---SHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCccc--CCCCcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHH
Confidence 9999988 5778999999557888888765543222 333444444443443221 167788999999999999999
Q ss_pred HHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHHhhCeeee----CCCCCCC-CCCeEEEEecC
Q 018172 262 IRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLRAERIMAR----GGRRFGA-DAKYARVSMLS 332 (360)
Q Consensus 262 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gI~~~----pg~~f~~-~~~~~R~s~~~ 332 (360)
|.+.+ +.+..+. +.++++|+.++. .+.+.+.|.++||.++ ||..+.. ..+++|+++..
T Consensus 306 L~~~g-~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~ 372 (425)
T 3ecd_A 306 LKAGG-VDLVTGG------------TDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPA 372 (425)
T ss_dssp HHHTT-CEEGGGS------------CSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHH
T ss_pred HHhCC-CeeccCC------------CCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchh
Confidence 98863 4433221 223467777653 2778888999999999 5433322 34689998532
Q ss_pred ------ChHHHHHHHHHHHHHHhch
Q 018172 333 ------REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 333 ------~~e~~~~~~~~l~~~~~~~ 351 (360)
+++++++++++|++++++.
T Consensus 373 ~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 373 GTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred heeccCCHHHHHHHHHHHHHHHhcc
Confidence 4899999999999998765
No 181
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.92 E-value=4.3e-23 Score=193.86 Aligned_cols=285 Identities=12% Similarity=0.048 Sum_probs=192.5
Q ss_pred ccCCCC--ccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHH
Q 018172 27 LSDMGN--VCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAE 103 (360)
Q Consensus 27 y~~~~g--~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~ 103 (360)
|.++.| . .++|++++++++. +++++|+|+++++..++.++ +++||+ |+++.|+|..+...
T Consensus 26 ~~~~~g~~~-----~~l~~~la~~~~~--------~~v~~~~ggt~al~~~~~~l~~~~gd~----Vl~~~~~~~~~~~~ 88 (394)
T 1o69_A 26 YIAPLGEFV-----NRFEQSVKDYSKS--------ENALALNSATAALHLALRVAGVKQDDI----VLASSFTFIASVAP 88 (394)
T ss_dssp TTSCTTHHH-----HHHHHHHHHHHCC--------SEEEEESCHHHHHHHHHHHTTCCTTCE----EEEESSSCGGGTHH
T ss_pred CccCCChHH-----HHHHHHHHHHhCC--------CcEEEeCCHHHHHHHHHHHcCCCCCCE----EEECCCccHHHHHH
Confidence 555455 5 9999999999984 48999999999999999999 899998 99999999999999
Q ss_pred HHHhCCeeeeecCCccc-ccc-------CC---CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC-CC
Q 018172 104 TDYLRSGLYKWDGDANT-FDK-------NN---GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ-YT 170 (360)
Q Consensus 104 ~~~~g~~~~~~~~~~~~-~~~-------~~---~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~-~~ 170 (360)
+...|++++.++.+.+. ++. ++ ++++|++++ |||...+ +.+.++|+++|+++|+|++|..+. +.
T Consensus 89 ~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~ 165 (394)
T 1o69_A 89 ICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYK 165 (394)
T ss_dssp HHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEET
T ss_pred HHHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeC
Confidence 99999999999876321 111 12 689998875 8998776 678888988999999999998422 11
Q ss_pred c--CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCCh-----------HHHHHHHHHhcccC
Q 018172 171 P--ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSK-----------ESQLRAAKILGIVS 237 (360)
Q Consensus 171 ~--~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~-----------~~~~~~~~~l~~~~ 237 (360)
. .....+.++...|.+|.+ +|.|+||++++++++++.+.........+.+. .....++..+..+
T Consensus 166 ~~~~~~~~~~~~~s~s~~K~l--~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l- 242 (394)
T 1o69_A 166 NKALGTFGEFGVYSYNGNKII--TTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQM- 242 (394)
T ss_dssp TEETTSSSSEEEEECCTTSSS--CCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHH-
T ss_pred CcccccccCcEEEEEeCCccC--CCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHH-
Confidence 1 111122233344446655 46789999995589999888765432111110 1111122222211
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCC--cccccCC------------------
Q 018172 238 DDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPG--FAWLESK------------------ 297 (360)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------------------ 297 (360)
+++++..++++++++++.+.|+++ +.+..+... ..++ ++++.++
T Consensus 243 ----~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~----------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 306 (394)
T 1o69_A 243 ----EVLEQRVLKKREIYEWYKEFLGEY--FSFLDELEN----------SRSNRWLSTALINFDKNELNACQKDINISQK 306 (394)
T ss_dssp ----TTHHHHHHHHHHHHHHHHHHHTTT--EECCCCCTT----------EECCCSSEEEEESCCGGGSCCCCEEEECCCC
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhccc--ccccCCCCC----------CcceeEEEEEEecchhhcccccccccccccc
Confidence 446667888899999999999876 333322100 0011 2344443
Q ss_pred ------chHHHHHHHHhhCeeeeCCCCC---C--CCC--------------CeEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 298 ------EDEDCEKLLRAERIMARGGRRF---G--ADA--------------KYARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 298 ------~~~~~~~~l~~~gI~~~pg~~f---~--~~~--------------~~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
+.+.+.+.|.++||.+++|... . ... ..+|+.... ++||+++++++|++++..
T Consensus 307 ~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~~ 386 (394)
T 1o69_A 307 NITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIKA 386 (394)
T ss_dssp CCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred ccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 2267888888999999998422 0 000 234444433 899999999999998765
No 182
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.92 E-value=3.4e-24 Score=205.67 Aligned_cols=289 Identities=11% Similarity=0.095 Sum_probs=191.3
Q ss_pred cccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC----CCCCCCceEEEeCCCCCCcH
Q 018172 26 YLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS----PGGPEPISVVSAAPYYSQYP 101 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~----~gd~~~~~vl~~~p~~~~~~ 101 (360)
.|.+..+. .+||++++++++. ++|++|+|+++++..++..+++ +||+. ..|+++.+.|..+.
T Consensus 71 ~y~~~~~~-----~~l~~~la~~~~~--------~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~-~~viv~~~~~~~~~ 136 (467)
T 1ax4_A 71 AYAGSRNY-----YDLKDKAKELFNY--------DYIIPAHQGRGAENILFPVLLKYKQKEGKAK-NPVFISNFHFDTTA 136 (467)
T ss_dssp CSSSCHHH-----HHHHHHHHHHHCC--------CEEEEESSHHHHHHHHHHHHHHHHHHTTCCS-SCEEEESSCCHHHH
T ss_pred ccccCccH-----HHHHHHHHHHcCC--------CcEEEcCCcHHHHHHHHHHHHHhhccCCCcc-ceEEEeccccchhh
Confidence 46666665 9999999999984 4899999999999999999988 88741 11677767767777
Q ss_pred HHHHHhCCeeeeecCCc----------c-cccc-------C----CCeeEEEEcCCCCCC-cccch----HHHHHHhhhc
Q 018172 102 AETDYLRSGLYKWDGDA----------N-TFDK-------N----NGAYIEVVNSPNNPD-GTIRE----AVLAKVNRSA 154 (360)
Q Consensus 102 ~~~~~~g~~~~~~~~~~----------~-~~~~-------~----~~~~~i~~~~p~NPt-G~~~~----~~~~~~~~~~ 154 (360)
..+...|.+++.++.+. + .++. + +++++|++++||||| |.+++ +.+.++|+++
T Consensus 137 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~ 216 (467)
T 1ax4_A 137 AHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQH 216 (467)
T ss_dssp HHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHH
T ss_pred HHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHc
Confidence 88888899887654321 1 1111 1 368999999999999 88877 3577889999
Q ss_pred CcEEEEeecccC-----------CCC-CcCCCC-----CCccEEEeccccccCCC-CceEEEEeecCH-HHHHHHHHHHh
Q 018172 155 EGKLIHDLAYYW-----------PQY-TPITGA-----ADHDIMLFTLSKCTGHA-GSRIGWALVKDT-EVARKMTRFIE 215 (360)
Q Consensus 155 ~~~li~D~ay~~-----------~~~-~~~~~~-----~~~~i~~~S~sK~~~~~-G~r~G~~~~~~~-~~~~~l~~~~~ 215 (360)
|+++|+|+++.. ... .+.... ...++++.|+||.++++ | |+++++++ ++++.+.....
T Consensus 217 gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G---g~~~~~d~~~l~~~~~~~~~ 293 (467)
T 1ax4_A 217 GIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIG---GLVAIRDNEEIFTLARQRCV 293 (467)
T ss_dssp TCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSC---EEEEESSCHHHHHHHHHHHH
T ss_pred CCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCCCcc---eEEEeCCHHHHHHHHHhhcc
Confidence 999999997542 110 111110 12346779999999876 4 77777436 88888766543
Q ss_pred hc----cc-cCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCC
Q 018172 216 LG----SI-GVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPG 290 (360)
Q Consensus 216 ~~----~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (360)
.. .. +.+...+.++...++...+ ++.++ ...++++++.+.|++. ++.+..|.+++
T Consensus 294 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~----~~~~~~~~l~~~L~~~-~~~~~~~~~~~------------- 353 (467)
T 1ax4_A 294 PMEGFVTYGGLAGRDMAAMVQGLEEGTE--EEYLH----YRIGQVKYLGDRLREA-GIPIQYPTGGH------------- 353 (467)
T ss_dssp HHTCSTTTTTCCHHHHHHHHHHHHHTTC--HHHHH----HHHHHHHHHHHHHHHT-TCCBCSSCCSS-------------
T ss_pred ccccccccCCccchHHHHHHHHHHHhhh--hhHHH----HHHHHHHHHHHHHHhC-CCCcccCCCce-------------
Confidence 21 12 2233333333334542221 12232 2235667888888773 45555555554
Q ss_pred ccccc-------CCc----hHHHHHHH-HhhCeeeeC-CCCC-CC----------CCCeEEEEec---CChHHHHHHHHH
Q 018172 291 FAWLE-------SKE----DEDCEKLL-RAERIMARG-GRRF-GA----------DAKYARVSML---SREEIFNIFLER 343 (360)
Q Consensus 291 ~~~~~-------~~~----~~~~~~~l-~~~gI~~~p-g~~f-~~----------~~~~~R~s~~---~~~e~~~~~~~~ 343 (360)
++|++ ++. ...+.+.| .++||.+.| |..+ +. ..+++||++. .+++++++++++
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~ 433 (467)
T 1ax4_A 354 AVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADA 433 (467)
T ss_dssp EEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHH
T ss_pred EEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHH
Confidence 44544 321 24455555 899999999 6532 21 1379999997 489999999999
Q ss_pred HHHHHhch
Q 018172 344 LSAIQGGS 351 (360)
Q Consensus 344 l~~~~~~~ 351 (360)
|.+++++.
T Consensus 434 l~~~~~~~ 441 (467)
T 1ax4_A 434 LIGLKEKF 441 (467)
T ss_dssp HHTTHHHH
T ss_pred HHHHHHhh
Confidence 99988753
No 183
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.92 E-value=1.5e-23 Score=198.19 Aligned_cols=275 Identities=14% Similarity=0.116 Sum_probs=179.4
Q ss_pred HHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH---HHHHHh--CCeeeeecCC
Q 018172 43 EAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP---AETDYL--RSGLYKWDGD 117 (360)
Q Consensus 43 ~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~---~~~~~~--g~~~~~~~~~ 117 (360)
+.++++++. +.++|++++| ++++..++..++++||+ |+++.|+|..+. ...... +...+.++.+
T Consensus 83 ~~la~~~~~------~~~~v~~~sG-s~a~~~a~~~~~~~gd~----v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 151 (420)
T 3gbx_A 83 DRAKELFGA------DYANVQPHSG-SQANFAVYTALLQPGDT----VLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID 151 (420)
T ss_dssp HHHHHHHTC------SEEECCCSSH-HHHHHHHHHHHCCTTCE----EEEEEEC------------CHHHHSEEEEEEEC
T ss_pred HHHHHHhCC------CCceeEecCc-HHHHHHHHHHhcCCCCE----EEecchhhcceeccchhhhhcccceeEEeccCC
Confidence 466666664 3445656666 88999999999999998 999999998743 222223 3444455443
Q ss_pred c------ccccc---CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCC----CCCcCCCCCCccEEEe
Q 018172 118 A------NTFDK---NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWP----QYTPITGAADHDIMLF 183 (360)
Q Consensus 118 ~------~~~~~---~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~----~~~~~~~~~~~~i~~~ 183 (360)
. +.++. ..++++|++++||||+ ..+ +.+.++|+++|+++|+||+|..+ ...+. .....++++.
T Consensus 152 ~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~di~~~ 228 (420)
T 3gbx_A 152 ESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPN-PVPHAHVVTT 228 (420)
T ss_dssp TTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCC-STTTSSEEEE
T ss_pred ccCCcCHHHHHHHHHhcCCeEEEEecCccCC--ccCHHHHHHHHHHcCCEEEEECCcchhceecccCCc-ccccCCEEEe
Confidence 2 22221 1258999999999985 334 67788899899999999998621 11111 1123679999
Q ss_pred ccccccCCCCceEEEEeecC--HHHHHHHHHHHhhcccc-CChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHH
Q 018172 184 TLSKCTGHAGSRIGWALVKD--TEVARKMTRFIELGSIG-VSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQ 260 (360)
Q Consensus 184 S~sK~~~~~G~r~G~~~~~~--~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 260 (360)
|+||.++ |.+.||+++++ .++.+.+......+..+ .+...+.++..++.... +.++++.+++++++++++.+
T Consensus 229 s~sK~~~--g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~---~~~~~~~~~~~~~~~~~l~~ 303 (420)
T 3gbx_A 229 TTHKTLA--GPRGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAM---EPEFKVYQQQVAKNAKAMVE 303 (420)
T ss_dssp ESSGGGC--SCSCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTT---SHHHHHHHHHHHHHHHHHHH
T ss_pred ecccCCC--CCCceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHH---hHhHHHHHHHHHHHHHHHHH
Confidence 9999985 44459999843 38888877654433333 33444444443443222 26778999999999999999
Q ss_pred HHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHHhhCeeeeC-------CCCCCCCCCeEEEE
Q 018172 261 VIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLRAERIMARG-------GRRFGADAKYARVS 329 (360)
Q Consensus 261 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gI~~~p-------g~~f~~~~~~~R~s 329 (360)
.|++. ++.+..+. ..++++|+.++. .+.+.+.|+++||.+.| |..|+ +..+||+
T Consensus 304 ~L~~~-g~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~--~~~iRi~ 368 (420)
T 3gbx_A 304 VFLNR-GYKVVSGG------------TENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFV--TSGIRIG 368 (420)
T ss_dssp HHHHT-TCEEGGGS------------CSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTT--CSEEEEE
T ss_pred HHHhc-CCeeccCC------------CCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCC--CcceEEe
Confidence 99885 34433211 223467777643 27788889999999998 44443 3469999
Q ss_pred ecC------ChHHHHHHHHHHHHHHhch
Q 018172 330 MLS------REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 330 ~~~------~~e~~~~~~~~l~~~~~~~ 351 (360)
+.. +++++++++++|++++.+.
T Consensus 369 ~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 369 SPAVTRRGFKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp CHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred cchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence 853 4799999999999998663
No 184
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.91 E-value=3.3e-24 Score=204.53 Aligned_cols=271 Identities=11% Similarity=0.030 Sum_probs=182.0
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC-
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG- 116 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~- 116 (360)
..++|+.+++ ++. + +++++|+|+|+++..++.+++++||. |+++.|+|.++...+...|++++.++.
T Consensus 59 ~~~~~~~la~-~g~------~-~~v~~~~G~t~a~~~~~~a~~~~gd~----Vlv~~~~h~s~~~~~~~~G~~~~~v~~~ 126 (446)
T 2x3l_A 59 ILKSMKQVEK-HSD------Y-DGYFLVNGTTSGILSVIQSFSQKKGD----ILMARNVHKSVLHALDISQQEGHFIETH 126 (446)
T ss_dssp HHHHHHHHCS-CTT------E-EEEEESSHHHHHHHHHHHTTTTSSSC----EEECTTCCHHHHHHHHHHTCCEEECEEE
T ss_pred HHHHHHHHHh-cCC------C-ceEEEeCCHHHHHHHHHHHhcCCCCE----EEEecCccHHHHHHHHHcCCeEEEEeCe
Confidence 3899999999 885 3 58999999999999999999999998 999999999999999999999988776
Q ss_pred -Ccc-----ccc----cCCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccC-CCCC--cC-CCCCCccEE
Q 018172 117 -DAN-----TFD----KNNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYW-PQYT--PI-TGAADHDIM 181 (360)
Q Consensus 117 -~~~-----~~~----~~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~-~~~~--~~-~~~~~~~i~ 181 (360)
+.+ .++ .+++++++++++| |+||.+++ +.+.++|+++|+++|+|++|+. ..+. +. ....+.+++
T Consensus 127 ~~~~~~~~~~~d~~~l~~~~~~~v~~~~~-n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~~~g~Di~ 205 (446)
T 2x3l_A 127 QSPLTNHYNKVNLSRLNNDGHKLVVLTYP-NYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQADYV 205 (446)
T ss_dssp ECTTTSSEEEEEC-------CCEEEEESS-CTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGGGGTCSEE
T ss_pred eccccCcCCCCCHHHHcCCCceEEEEECC-CCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChHHcCCCEE
Confidence 432 111 3467899999995 56999988 7788889889999999999985 1111 11 112345799
Q ss_pred EeccccccCCCCceEEEEeecCHHHHH--HHHHHHh-hccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 182 LFTLSKCTGHAGSRIGWALVKDTEVAR--KMTRFIE-LGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 182 ~~S~sK~~~~~G~r~G~~~~~~~~~~~--~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
+.|+||.++ .+.++||+++ ++++++ .+..... ..+.+.+.....++.++++.+... ..++..++.+++.+++
T Consensus 206 ~~S~~K~l~-~~~g~g~l~~-~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~---g~~~~~~~~~~l~~~l 280 (446)
T 2x3l_A 206 VQSFHKTLP-ALTMGSVLYI-HKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQFYKTY---DSTLFFAKRAQLIECL 280 (446)
T ss_dssp EECHHHHSS-SCTTCEEEEE-ETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHH
T ss_pred EECCccccc-cccccEEEEE-cCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHh---CHHHHHHHHHHHHHHH
Confidence 999999554 3344899998 444433 3332221 223334444333333333322110 0111334444444444
Q ss_pred HHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--hHHHHHHHHhhCeeee-CCCCCCCCCCeEEEEecC--C
Q 018172 259 RQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--DEDCEKLLRAERIMAR-GGRRFGADAKYARVSMLS--R 333 (360)
Q Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gI~~~-pg~~f~~~~~~~R~s~~~--~ 333 (360)
.+. ++.+..+. .+.++|+.+++ ...+.+.|+++||.+. +| .+++|++++. +
T Consensus 281 ~~~-----g~~~~~~~-------------~~~~l~i~~~~~~~~~l~~~L~~~GI~v~~~g------~~~iRi~~~~~~t 336 (446)
T 2x3l_A 281 ENK-----GFEMLQVD-------------DPLKLLIKYEGFTGHDIQNWFMNAHIYLELAD------DYQALAILPLWHH 336 (446)
T ss_dssp HHH-----TCEEEECS-------------STTEEEEECTTSCHHHHHHHHHHTTEEESEEC------SSCEEEECCCCCT
T ss_pred HHc-----CCEECcCC-------------CCeEEEEEeCCcCHHHHHHHHHHCCCEEEecC------CCEEEEEeecCCC
Confidence 444 33332221 12356777653 3677788888899987 43 3689999976 8
Q ss_pred hHHHHHHHHHHHHHHhch
Q 018172 334 EEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 334 ~e~~~~~~~~l~~~~~~~ 351 (360)
++++ +++++|++++++.
T Consensus 337 ~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 337 DDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp TCCC-CHHHHHHHHHTCC
T ss_pred HHHH-HHHHHHHHHHHhh
Confidence 8999 9999999998765
No 185
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.91 E-value=8.4e-24 Score=201.16 Aligned_cols=276 Identities=11% Similarity=0.019 Sum_probs=184.1
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc---------CCC-CCCCceEEEeCCCCCCcHH-HHHH
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS---------SPG-GPEPISVVSAAPYYSQYPA-ETDY 106 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~---------~~g-d~~~~~vl~~~p~~~~~~~-~~~~ 106 (360)
..+|++.++++++ . ++|++|+|+++++..++..+. ++| +. |++.+|+|..... .+..
T Consensus 109 ~~~l~~~la~~~g-------~-~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~----vi~~~~~yhg~~~~~~~~ 176 (433)
T 1z7d_A 109 LGICERYLTNLLG-------Y-DKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAK----IVVCKNNFSGRTLGCISA 176 (433)
T ss_dssp HHHHHHHHHHHHT-------C-SEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCE----EEEETTC-----------
T ss_pred HHHHHHHHHhhcC-------C-CeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCe----EEEEeCCcCCcchhhhcc
Confidence 3677888887775 3 489999999999999988764 356 66 9999999987644 3333
Q ss_pred hC------------CeeeeecC-Ccccccc---CCCeeEEEEcCCCCCCcccc-h----HHHHHHhhhcCcEEEEeeccc
Q 018172 107 LR------------SGLYKWDG-DANTFDK---NNGAYIEVVNSPNNPDGTIR-E----AVLAKVNRSAEGKLIHDLAYY 165 (360)
Q Consensus 107 ~g------------~~~~~~~~-~~~~~~~---~~~~~~i~~~~p~NPtG~~~-~----~~~~~~~~~~~~~li~D~ay~ 165 (360)
.| .++..++. |.+.++. ++++++|+++..+|+||.+. + +.+.++|+++|+++|+||+|.
T Consensus 177 ~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~ 256 (433)
T 1z7d_A 177 STTKKCTSNFGPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT 256 (433)
T ss_dssp ---------------CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cCCccccccCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCcc
Confidence 33 24444543 3333322 45677777665567899864 3 577889999999999999998
Q ss_pred CCCCC-c-CC-CC--CCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCC
Q 018172 166 WPQYT-P-IT-GA--ADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDD 239 (360)
Q Consensus 166 ~~~~~-~-~~-~~--~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (360)
+.... . .. .. ...++ .||||.++ +| +|+||+++ ++++++.+.......+++.|++++.++.++++.+.+
T Consensus 257 g~g~~g~~~~~~~~~~~~di--~t~sK~l~-~G~~~~G~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~- 331 (433)
T 1z7d_A 257 GLGRTGKLLCVHHYNVKPDV--ILLGKALS-GGHYPISAVLA-NDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN- 331 (433)
T ss_dssp TTTTTSSSSGGGGGTCCCSE--EEECGGGG-TTSSCCEEEEE-CHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH-
T ss_pred CCCcCCcchhhHhcCCCCCE--EEECcccc-CCCCCeEEEEE-CHHHHhhhccccccccCCCCHHHHHHHHHHHHHHHh-
Confidence 42211 1 11 11 12233 38999999 89 99999999 788888776543445678899999888888874422
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHHhhCeeee
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSG-VFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLRAERIMAR 314 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gI~~~ 314 (360)
++..++++++++++.+.|+++. ...... ..++.++|+|+.+++ ...+.+.|.++||.+.
T Consensus 332 -----~~~~~~~~~~~~~l~~~L~~l~~~~~~~~-----------~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~ 395 (433)
T 1z7d_A 332 -----EKLCENAEKLGGPFLENLKRELKDSKIVR-----------DVRGKGLLCAIEFKNELVNVLDICLKLKENGLITR 395 (433)
T ss_dssp -----TTHHHHHHHHHHHHHHHHHHHHTTCTTEE-----------EEEEETTEEEEEECTTTCCHHHHHHHHHHTTEECC
T ss_pred -----ccHHHHHHHHHHHHHHHHHHHHHhCCCeE-----------EEEeeeeEEEEEEccChhHHHHHHHHHHHCCeEEe
Confidence 2456667777788888877651 111100 011334567777653 3567777778999999
Q ss_pred CCCCCCCCCCeEEEEec--CChHHHHHHHHHHHHHHhch
Q 018172 315 GGRRFGADAKYARVSML--SREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 315 pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~~ 351 (360)
|+ ..+++|+++. .++|++++++++|++++++.
T Consensus 396 ~~-----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 429 (433)
T 1z7d_A 396 DV-----HDKTIRLTPPLCITKEQLDECTEIIVKTVKFF 429 (433)
T ss_dssp EE-----TTTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cC-----CCCEEEEECCcCCCHHHHHHHHHHHHHHHHHH
Confidence 85 2579999764 39999999999999998653
No 186
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.91 E-value=1.1e-23 Score=200.69 Aligned_cols=274 Identities=13% Similarity=0.042 Sum_probs=192.6
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc---------CCC-CCCCceEEEeCCCCCCcH-HHHHH
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS---------SPG-GPEPISVVSAAPYYSQYP-AETDY 106 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~---------~~g-d~~~~~vl~~~p~~~~~~-~~~~~ 106 (360)
..++++.++++++ . ++|++++|+++++..++..+. .+| +. |++.+|+|.... ..+..
T Consensus 120 ~~~l~~~la~~~g-------~-~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~----vi~~~~~yhg~~~~~~~~ 187 (439)
T 2oat_A 120 LGEYEEYITKLFN-------Y-HKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAK----IVFAAGNFWGRTLSAISS 187 (439)
T ss_dssp HHHHHHHHHHHHT-------C-SEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCE----EEEETTCCCCSSHHHHTT
T ss_pred HHHHHHHHHHhcC-------C-CEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCe----EEEEcCCCCCCCHhHhhc
Confidence 3788888888775 3 489999999999999998875 345 55 999999998764 44444
Q ss_pred hC------------CeeeeecC-Ccccccc---CCCeeEEEEcCCCCCCcccc-h----HHHHHHhhhcCcEEEEeeccc
Q 018172 107 LR------------SGLYKWDG-DANTFDK---NNGAYIEVVNSPNNPDGTIR-E----AVLAKVNRSAEGKLIHDLAYY 165 (360)
Q Consensus 107 ~g------------~~~~~~~~-~~~~~~~---~~~~~~i~~~~p~NPtG~~~-~----~~~~~~~~~~~~~li~D~ay~ 165 (360)
.| .+++.++. |.+.++. ++++++|+++..+|++|.+. + +.+.++|+++|+++|+||+|.
T Consensus 188 ~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~ 267 (439)
T 2oat_A 188 STDPTSYDGFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQT 267 (439)
T ss_dssp CCCHHHHTTSCSCCTTEEEECSSCHHHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT
T ss_pred CCChhcccCCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 44 34555553 3333332 35677777665567899765 2 577889999999999999997
Q ss_pred CCCCC--cCC-CC--CCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCC
Q 018172 166 WPQYT--PIT-GA--ADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDD 239 (360)
Q Consensus 166 ~~~~~--~~~-~~--~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (360)
+.... ... .. ...++ .|+||.++ .| +|+||+++ ++++++.+.......+++.|++++.++.++++.+.+
T Consensus 268 g~g~~g~~~~~~~~~~~~Di--~t~sK~l~-~G~~~~G~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~- 342 (439)
T 2oat_A 268 GLARTGRWLAVDYENVRPDI--VLLGKALS-GGLYPVSAVLC-DDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE- 342 (439)
T ss_dssp TTTTTSSSSGGGGGTCCCSE--EEECGGGG-TTSSCCEEEEE-CHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH-
T ss_pred CCccCCcchhHHHhCCCCcE--EEeccccc-CCCCCeEEEEE-CHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh-
Confidence 42211 111 11 12233 39999999 78 99999999 788888776543445678899999988888874421
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-----hHHHHHHHHhhCeeee
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-----DEDCEKLLRAERIMAR 314 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~gI~~~ 314 (360)
++..++++++++++.+.|++++ ..... ..++.++|+|+.+++ ...+.+.|.++||.+.
T Consensus 343 -----~~~~~~~~~~~~~l~~~L~~l~-~~~~~-----------~~~~~g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~ 405 (439)
T 2oat_A 343 -----ENLAENADKLGIILRNELMKLP-SDVVT-----------AVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAK 405 (439)
T ss_dssp -----TTHHHHHHHHHHHHHHHHTTSC-TTTEE-----------EEEEETTEEEEEECCCSSCCHHHHHHHHHHTTEECC
T ss_pred -----hhHHHHHHHHHHHHHHHHHHhc-CCCcE-----------EEEeeeeEEEEEEecCccHHHHHHHHHHHHCCeEEe
Confidence 2456778888899999998763 21110 011334566776643 3567777778999999
Q ss_pred CCCCCCCCCCeEEEEec--CChHHHHHHHHHHHHHHhc
Q 018172 315 GGRRFGADAKYARVSML--SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 315 pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~ 350 (360)
|+ ..+++|+++. .++|++++++++|++++.+
T Consensus 406 ~~-----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 406 PT-----HGDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp BS-----SSSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred cC-----CCCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 84 2579999764 4999999999999998764
No 187
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.91 E-value=3.8e-23 Score=194.33 Aligned_cols=287 Identities=13% Similarity=0.070 Sum_probs=196.6
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHH-----HhCCeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETD-----YLRSGLY 112 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~-----~~g~~~~ 112 (360)
..+|++.++++.+. + ++++++++++++.. +..++++||+ |+++.|+|......+. ..|.+++
T Consensus 69 ~~~l~~~la~l~g~-------~-~~~~~~sG~~Ai~~-~~~l~~~gd~----Vi~~~~~y~~~~~~~~~~~~~~~g~~~~ 135 (400)
T 3nmy_A 69 RFAYERCVAALEGG-------T-RAFAFASGMAATST-VMELLDAGSH----VVAMDDLYGGTFRLFERVRRRTAGLDFS 135 (400)
T ss_dssp HHHHHHHHHHHHTC-------S-EEEEESSHHHHHHH-HHTTSCTTCE----EEEESSCCHHHHHHHHHTHHHHHCCEEE
T ss_pred HHHHHHHHHHHhCC-------C-CEEEecCHHHHHHH-HHHHcCCCCE----EEEeCCCchHHHHHHHHhhHhhcCeEEE
Confidence 37899999999884 3 46666666999988 5678899998 9999999997666543 3599999
Q ss_pred eecCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC-CCcCCCCCCccEEEecccc
Q 018172 113 KWDGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ-YTPITGAADHDIMLFTLSK 187 (360)
Q Consensus 113 ~~~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~-~~~~~~~~~~~i~~~S~sK 187 (360)
.++.+ .+.++. ++++++|++++|+||||.+++ +.+.++|+++|+++|+|++|..+. ..++ ..+.++++.|+||
T Consensus 136 ~v~~~d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~--~~g~div~~S~sK 213 (400)
T 3nmy_A 136 FVDLTDPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPL--SLGADLVVHSATK 213 (400)
T ss_dssp EECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGG--GGTCSEEEEETTT
T ss_pred EECCCCHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh--hcCCcEEEecCcc
Confidence 88764 333332 468999999999999999998 778889999999999999997421 1111 2467899999999
Q ss_pred ccCCCCceEEE--EeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhc
Q 018172 188 CTGHAGSRIGW--ALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQS 265 (360)
Q Consensus 188 ~~~~~G~r~G~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 265 (360)
.++.+|.++|+ +++.++++.+.+.......+.+.++..+.++...++ .++...++..++.+.+.+.|+++
T Consensus 214 ~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~--------~l~~r~~~~~~~a~~l~~~L~~~ 285 (400)
T 3nmy_A 214 YLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLK--------TLPLRMRAHCENALALAQWLETH 285 (400)
T ss_dssp TTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHT--------THHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHh--------HHHHHHHHHHHHHHHHHHHHHcC
Confidence 99878777755 555588999999887776677777777766666554 23444556677788888889888
Q ss_pred CCcccCCCCCcc----cccccccCCCCCCcccccCCch-HHHHHHHHh---hCeeeeCCCCC------------------
Q 018172 266 GVFGLPEYPLEY----CNFTGKFTNSHPGFAWLESKED-EDCEKLLRA---ERIMARGGRRF------------------ 319 (360)
Q Consensus 266 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~---~gI~~~pg~~f------------------ 319 (360)
+.+....+++.. +........+.+.++++.+++. +...+.+.+ .++.+..|..+
T Consensus 286 p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~ 365 (400)
T 3nmy_A 286 PAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVAR 365 (400)
T ss_dssp TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTTTSCHHH
T ss_pred CCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcCCcceEecCCCCCcceeeCccccccccCCHHH
Confidence 755443222210 0111111245567889998764 333333333 34444444322
Q ss_pred ----CCCCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 320 ----GADAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 320 ----~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
+..++.+|+|++.+ +.+.+++.|++.+.
T Consensus 366 ~~~~gi~~~liRlsvGle--~~~dli~dl~~al~ 397 (400)
T 3nmy_A 366 REQLGISDALVRLSVGIE--DLGDLRGDLERALV 397 (400)
T ss_dssp HHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHC
T ss_pred HHhcCCCcCeEEEEeCcC--CHHHHHHHHHHHHh
Confidence 22467899999762 23344555666554
No 188
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.91 E-value=7.9e-24 Score=201.10 Aligned_cols=286 Identities=11% Similarity=0.007 Sum_probs=183.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC--CCCCCCceEEEeCCCCCCcHHHHHH-hCC------
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS--PGGPEPISVVSAAPYYSQYPAETDY-LRS------ 109 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~--~gd~~~~~vl~~~p~~~~~~~~~~~-~g~------ 109 (360)
.+|++.++++++ ..++|++|+|+++++..++..+.. +++. |++.+|+|..+...+.. .|.
T Consensus 96 ~~l~~~la~~~~-------~~~~v~~~~~Gsea~~~ai~~a~~~~~~~~----vi~~~~~yhg~~~~~~~~~g~~~~~~~ 164 (429)
T 3k28_A 96 NKLAKLVIERVP-------SIEIVRMVNSGTEATMSALRLARGYTGRNK----ILKFIGCYHGHGDSLLIKAGSGVATLG 164 (429)
T ss_dssp HHHHHHHHHHST-------TCSEEEEESSHHHHHHHHHHHHHHHHTCCE----EEEEETCCCCSCGGGCSSCCTTC----
T ss_pred HHHHHHHHHhCC-------CCCEEEEeCChHHHHHHHHHHHHHhhCCCE----EEEECCCcCCCcHHHHHhcCCcccccC
Confidence 566666666653 235899999999999999988754 4455 99999999866543322 221
Q ss_pred -------------eeeeecC-Ccccccc-----CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeeccc
Q 018172 110 -------------GLYKWDG-DANTFDK-----NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYY 165 (360)
Q Consensus 110 -------------~~~~~~~-~~~~~~~-----~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~ 165 (360)
+++.++. |.+.++. .+++++|+++.++|++|.+.+ +.+.++|+++|+++|+||+|.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~ 244 (429)
T 3k28_A 165 LPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMT 244 (429)
T ss_dssp -CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTT
T ss_pred CCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 1222222 2222222 135566666666667777765 567789999999999999997
Q ss_pred CCCCCcCC---CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHH---hhccccCChHHHHHHHHHhcccCCC
Q 018172 166 WPQYTPIT---GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFI---ELGSIGVSKESQLRAAKILGIVSDD 239 (360)
Q Consensus 166 ~~~~~~~~---~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (360)
+. ..... ...+...-+.||||.++ .|+|+||+++ ++++++.+.... ...+++.|+++|.++.++++...
T Consensus 245 g~-~~g~~~~~~~~~~~~di~t~sK~~~-~G~~iG~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~-- 319 (429)
T 3k28_A 245 GF-RVAYNCGQGYYGVTPDLTCLGKVIG-GGLPVGAYGG-KAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT-- 319 (429)
T ss_dssp TT-TSSTTHHHHHHTCCCSEEEECGGGG-TTSCCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC--
T ss_pred cc-ccCcchHHHHhCCCCceehhhhhhc-CCCCeEEEEE-cHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH--
Confidence 53 11110 11122222457999998 6999999998 899988875432 23467889999999999888432
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhc----CCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCee
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQS----GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIM 312 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~ 312 (360)
++.++.++++++++.+.|+++ +.+......|.+..+.. ......+|..+..++. ..+.+.|.++||.
T Consensus 320 -----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 393 (429)
T 3k28_A 320 -----PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFF-TDEPVINYDAAKSSNLQFFAAYYREMVEQGVF 393 (429)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEES-SSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEE
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEE-ecCCcccccccccccHHHHHHHHHHHHHCCeE
Confidence 456666666666666666554 33222222233222110 0011112222222332 5567778899999
Q ss_pred eeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 313 ARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 313 ~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
++|+. .+.+|+++..++|++++++++|++++.+.
T Consensus 394 v~~~~-----~~~~r~~~~~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 394 LPPSQ-----FEGLFLSTVHSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp CCSST-----TSCBCCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred EecCC-----CCCEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 99863 45789988779999999999999998764
No 189
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.91 E-value=1.8e-23 Score=200.11 Aligned_cols=280 Identities=10% Similarity=-0.012 Sum_probs=191.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC-------CCCCCCceEEEeCCCCCCcHHHHHHhCC--
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS-------PGGPEPISVVSAAPYYSQYPAETDYLRS-- 109 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~-------~gd~~~~~vl~~~p~~~~~~~~~~~~g~-- 109 (360)
.+|++.++++++. ..++|++|+|+++++..+++.+.+ +|+. .|++.+++|......+...+.
T Consensus 121 ~~L~e~la~~~~~------~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~---~ii~~~~~yhg~~~~~~~~~~~~ 191 (457)
T 3tfu_A 121 ARLAKLLVDITPA------GLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKR---RLMTWRGGYHGDTFLAMSICDPH 191 (457)
T ss_dssp HHHHHHHHHHSST------TEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCC---EEEEETTCCCCSSHHHHTTSCCC
T ss_pred HHHHHHHHHhCCC------CcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCc---eEEEEcCCcCCccHHhhcccCCc
Confidence 6777888877643 335899999999999999998864 5553 399999999887655554421
Q ss_pred ------------eeeeecCC--------cccccc--C---CCeeEEEEcC-CCCCCcccch-----HHHHHHhhhcCcEE
Q 018172 110 ------------GLYKWDGD--------ANTFDK--N---NGAYIEVVNS-PNNPDGTIRE-----AVLAKVNRSAEGKL 158 (360)
Q Consensus 110 ------------~~~~~~~~--------~~~~~~--~---~~~~~i~~~~-p~NPtG~~~~-----~~~~~~~~~~~~~l 158 (360)
.+..++.+ .+.++. + +++++|++.. ++||+|.+++ +.+.++|+++|+++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gill 271 (457)
T 3tfu_A 192 GGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLL 271 (457)
T ss_dssp ----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEE
T ss_pred ccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 22223321 122221 1 5678888888 8999998874 56778999999999
Q ss_pred EEeecccCCCCC-cCC--CCCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHH-----HhhccccCChHHHHHH
Q 018172 159 IHDLAYYWPQYT-PIT--GAADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRF-----IELGSIGVSKESQLRA 229 (360)
Q Consensus 159 i~D~ay~~~~~~-~~~--~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~ 229 (360)
|+||+|.+.... ... ...+...-+.||||.++ .| +|+||+++ ++++++.+... ....+++.|++++.++
T Consensus 272 I~DEv~~g~gr~G~~~a~~~~~~~pdiit~sK~l~-gG~~~lG~v~~-~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa 349 (457)
T 3tfu_A 272 IFDEIATGFGRTGALFAADHAGVSPDIMCVGKALT-GGYLSLAATLC-TADVAHTISAGAAGALMHGPTFMANPLACAVS 349 (457)
T ss_dssp EEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGG-TTSSCCEEEEE-EHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHH
T ss_pred EEEcCccCCccccchhHhHhcCCCceEEEEChhhh-CCCcceEEEEE-cHHHHHHhhccCCCceeEecCCCcCHHHHHHH
Confidence 999999853211 111 11111111338999887 56 79999999 89999988632 2335678899999999
Q ss_pred HHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHH
Q 018172 230 AKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLL 306 (360)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l 306 (360)
.++|+.+.+. ...++++++.+++.+.|+++....... ..++.++|+++.+++. ..+.+.|
T Consensus 350 ~aaL~~~~~~------~~~~~~~~~~~~l~~~L~~l~~~~~v~-----------~vr~~G~~~~i~l~~~~~~~~~~~~l 412 (457)
T 3tfu_A 350 VASVELLLGQ------DWRTRITELAAGLTAGLDTARALPAVT-----------DVRVCGAIGVIECDRPVDLAVATPAA 412 (457)
T ss_dssp HHHHHHHHTS------CHHHHHHHHHHHHHHHHGGGGGSTTEE-----------EEEECSSCEEEEESSCCCHHHHHHHH
T ss_pred HHHHHHHhhh------HHHHHHHHHHHHHHHHHHHHhcCCCee-----------eeecCCeEEEEEECCcccHHHHHHHH
Confidence 9988755332 345556666677777776652111000 1123455777777543 6677788
Q ss_pred HhhCeeeeCCCCCCCCCCeEEEEe--cCChHHHHHHHHHHHHHHhchh
Q 018172 307 RAERIMARGGRRFGADAKYARVSM--LSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 307 ~~~gI~~~pg~~f~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
.++||.++|. .+++||++ ..++|++++++++|++++.+.+
T Consensus 413 ~~~Gv~v~~~------~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 413 LDRGVWLRPF------RNLVYAMPPYICTPAEITQITSAMVEVARLVG 454 (457)
T ss_dssp HHTTEECCCB------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred HHCCeEEEec------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 8889999983 35899985 3499999999999999997643
No 190
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.91 E-value=4.8e-24 Score=203.73 Aligned_cols=263 Identities=12% Similarity=0.008 Sum_probs=167.9
Q ss_pred CcEEEcCChHHHHHHHHHhhcC----CC----CCCCceEEEeCCCCCCcHHHHHHhCCe-------------eeeecCCc
Q 018172 60 RHIVIGTGSTQLYQAALYALSS----PG----GPEPISVVSAAPYYSQYPAETDYLRSG-------------LYKWDGDA 118 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~----~g----d~~~~~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~ 118 (360)
++|++|+|+++++..++..+.. +| +. |++.+|+|..+...+..++.. +..++.+.
T Consensus 105 ~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~----vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (448)
T 3dod_A 105 TRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQK----FIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPY 180 (448)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCE----EEEEC-----------------------------CEEECCCC
T ss_pred CEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCE----EEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCc
Confidence 5899999999999999998865 45 55 999999998776554443321 12222211
Q ss_pred -----------------ccccc-----CCCeeEEEEcCCC-CCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCC
Q 018172 119 -----------------NTFDK-----NNGAYIEVVNSPN-NPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYT 170 (360)
Q Consensus 119 -----------------~~~~~-----~~~~~~i~~~~p~-NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~ 170 (360)
+.++. .+++++|++..++ |++|...+ +.+.++|+++|+++|+||+|.+....
T Consensus 181 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~ 260 (448)
T 3dod_A 181 VYRSESGDPDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRT 260 (448)
T ss_dssp CTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT
T ss_pred cccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcc
Confidence 11221 2356667776666 88887654 56778999999999999999843211
Q ss_pred -cC--CCCCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHH-------HHhhccccCChHHHHHHHHHhcccCCC
Q 018172 171 -PI--TGAADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTR-------FIELGSIGVSKESQLRAAKILGIVSDD 239 (360)
Q Consensus 171 -~~--~~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (360)
.. ....+...-+.+|||.++ .| +|+||+++ ++++++.+.+ .....+++.|++++.++.++++.+.+.
T Consensus 261 g~~~a~~~~~~~~di~t~sK~l~-~G~~~ig~v~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~ 338 (448)
T 3dod_A 261 GKMFACEHENVQPDLMAAGKGIT-GGYLPIAVTFA-TEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESE 338 (448)
T ss_dssp SSSSGGGGGTCCCSEEEECGGGG-TTSSCCEEEEE-EHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHT
T ss_pred cchhhhhhcCCCCCEEEeccccc-CCcCceEEEEE-CHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcc
Confidence 11 112222222457899998 69 59999998 8999998875 434467788999999999988754332
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch--------------HHHHHH
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED--------------EDCEKL 305 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~ 305 (360)
...++.++..+..++.+.+ +..++.+.... +.+.|+|+.+++. ..+.+.
T Consensus 339 --~~~~~~~~~~~~~~~~l~~-l~~~~~~~~~~--------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (448)
T 3dod_A 339 --NIVEQVAEKSKKLHFLLQD-LHALPHVGDIR--------------QLGFMCGAELVRSKETKEPYPADRRIGYKVSLK 401 (448)
T ss_dssp --THHHHHHHHHHHHHHHHHH-HTTSTTEEEEE--------------EETTEEEEEECSBTTTTBCCCGGGCHHHHHHHH
T ss_pred --cHHHHHHHHHHHHHHHHHH-HhcCCCeEEEE--------------eeeEEEEEEEccCcccccccchhhHHHHHHHHH
Confidence 4555555555555555555 55554322221 2233555555431 456777
Q ss_pred HHhhCeeeeCCCCCCCCCCeEEEEe--cCChHHHHHHHHHHHHHHhch
Q 018172 306 LRAERIMARGGRRFGADAKYARVSM--LSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 306 l~~~gI~~~pg~~f~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~~ 351 (360)
|.++||.++|+ .+++||++ ..++|++++++++|++++.+.
T Consensus 402 l~~~Gv~~~~~------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 443 (448)
T 3dod_A 402 MRELGMLTRPL------GDVIAFLPPLASTAEELSEMVAIMKQAIHEV 443 (448)
T ss_dssp HHHTTEECCEE------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCcEEecc------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 78889999986 26999954 449999999999999999764
No 191
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.91 E-value=1.6e-23 Score=195.82 Aligned_cols=285 Identities=12% Similarity=0.054 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcH--HHHHHhCC--eeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYP--AETDYLRS--GLYKW 114 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~--~~~~~~g~--~~~~~ 114 (360)
.++|+.++++++. + +.|++|+|+|++++.++.. +++||+ |++++++|.... ..++..|. +++.+
T Consensus 38 ~~~~~~l~~~~~~------~-~~v~~~~sgt~a~~~~~~~-~~~gd~----vi~~~~~~~~~~~~~~~~~~g~~~~~~~~ 105 (379)
T 3ke3_A 38 NDLLSNLKTVYNA------E-AAVIIPGSGTYGMEAVARQ-LTIDED----CLIIRNGWFSYRWTQILEKGKFAKSSTVL 105 (379)
T ss_dssp HHHHHHHHHHHTC------S-EEEEEESCHHHHHHHHHHH-HCTTCE----EEEEECSHHHHHHHHHHHHHCCSSEEEEE
T ss_pred HHHHHHHHHHhCC------C-CEEEEcCChhHHHHHHHHh-CCCCCe----EEEEeCCchhHHHHHHHHHhCCCCceEEE
Confidence 6777777788774 3 5799999999999998765 468988 999999887653 34555564 66666
Q ss_pred cCCc---------------ccccc---CCCeeEEEEcCCCCCCcccch----HHHHHHhhhcCcEEEEeecccCCCCCcC
Q 018172 115 DGDA---------------NTFDK---NNGAYIEVVNSPNNPDGTIRE----AVLAKVNRSAEGKLIHDLAYYWPQYTPI 172 (360)
Q Consensus 115 ~~~~---------------~~~~~---~~~~~~i~~~~p~NPtG~~~~----~~~~~~~~~~~~~li~D~ay~~~~~~~~ 172 (360)
+.+. +.+.. ++++++|++++++||||.+++ +.+.++|+++|+++|+|+++. +..+..
T Consensus 106 ~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~~~~ 184 (379)
T 3ke3_A 106 TAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCVWLD 184 (379)
T ss_dssp ECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTCCCC
T ss_pred eccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCcccc
Confidence 5432 22211 237899999999999999988 356778888999999999987 433222
Q ss_pred CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHh------------------h----ccccCChHHHHHHH
Q 018172 173 TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIE------------------L----GSIGVSKESQLRAA 230 (360)
Q Consensus 173 ~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~------------------~----~~~~~~~~~~~~~~ 230 (360)
....+.++++.|++|.++ .+.++|++++ ++++++.+..... . ...+.|...+.++.
T Consensus 185 ~~~~~~d~~~~s~~K~l~-~~~g~g~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~ 262 (379)
T 3ke3_A 185 MKELGIDVLISAPQKGWS-STPCAGLVML-SAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFR 262 (379)
T ss_dssp HHHHTCSEEEECTTTTTC-SCCCEEEEEE-CHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHH
T ss_pred ccccCCCEEEecchhhcC-CCCceEEEEE-CHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHH
Confidence 233467899999999886 3345899998 7888887754110 0 11266777777777
Q ss_pred HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCchH-HHHHHHHhh
Q 018172 231 KILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKEDE-DCEKLLRAE 309 (360)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~ 309 (360)
++++.+.+ ..+++.+++++++++++.+.|++++ +.+..+.+.. .+....+..++.+ ...+.|.++
T Consensus 263 aal~~~~~---~g~~~~~~~~~~l~~~l~~~l~~~g-~~~~~~~~~~----------~~~i~~~~~~~~~~~~~~~L~~~ 328 (379)
T 3ke3_A 263 DAILEAKE---IGFDILRDAQWELGNRVRKVLTDKG-IESVAAEGFE----------APGVVVSYTERDDMHKGSAFAEA 328 (379)
T ss_dssp HHHHHHHH---HCHHHHHHHHHHHHHHHHHHHHHTT-CCBSBCTTCB----------CSSEEEEECSCHHHHSSHHHHHT
T ss_pred HHHHHHHH---hcHHHHHHHHHHHHHHHHHHHHHcC-CEecCCcccc----------CceEEEEccCCcchHHHHHHHHC
Confidence 77775431 3378889999999999999999884 4443332110 0111222333332 226778889
Q ss_pred CeeeeCCCCCCC----CCCeEEEEecC--ChHHHHHHHHHHHHHHhchh
Q 018172 310 RIMARGGRRFGA----DAKYARVSMLS--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 310 gI~~~pg~~f~~----~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
||.+.+|..+.. ..+.+|+|+.. +++++++++++|++++++..
T Consensus 329 Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 329 GLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp TCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 999999876532 26799999865 89999999999999987643
No 192
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.90 E-value=5.8e-22 Score=189.26 Aligned_cols=277 Identities=14% Similarity=0.067 Sum_probs=187.7
Q ss_pred HHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH-H----HHHhCCeeeeecCC
Q 018172 43 EAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA-E----TDYLRSGLYKWDGD 117 (360)
Q Consensus 43 ~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~-~----~~~~g~~~~~~~~~ 117 (360)
+.++++++. + ...++++|+++++..++..++++||+ |+++.|+|..+.. . ....+..++.++.+
T Consensus 98 ~~la~~~g~------~-~~~v~~~sGs~a~~~a~~~~~~~Gd~----Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 166 (447)
T 3h7f_A 98 DRAKALFGA------E-FANVQPHSGAQANAAVLHALMSPGER----LLGLDLANGGHLTHGMRLNFSGKLYENGFYGVD 166 (447)
T ss_dssp HHHHHHHTC------S-EEECCCSSHHHHHHHHHHHHCCTTCE----EEEECGGGTCCGGGTCTTSHHHHSSEEEEECCC
T ss_pred HHHHHHcCC------C-ceEEEeCCHHHHHHHHHHHhcCCCCE----EEecCcccccccchhhhhhhcCCeeEEEEcCcC
Confidence 667777774 2 23333777899999999999999998 9999999988321 1 22235566666654
Q ss_pred cccccc----------CCCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecccC-----CCCCcCCCCCCccEEE
Q 018172 118 ANTFDK----------NNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYW-----PQYTPITGAADHDIML 182 (360)
Q Consensus 118 ~~~~~~----------~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay~~-----~~~~~~~~~~~~~i~~ 182 (360)
.+.... ..++++|++++|+||++..+ +.+.++|+++|+++|+|++|.. +...... ...++++
T Consensus 167 ~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~~l-~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~--~~~di~~ 243 (447)
T 3h7f_A 167 PATHLIDMDAVRATALEFRPKVIIAGWSAYPRVLDF-AAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV--PHADVVS 243 (447)
T ss_dssp TTTCSCCHHHHHHHHHHHCCSEEEEECSSCCSCCCH-HHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST--TTCSEEE
T ss_pred cccCCcCHHHHHHHHHhcCCeEEEEcCCCCCCccCH-HHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC--CCCcEEE
Confidence 332211 23688999999999998733 6777888889999999999752 1111111 2456899
Q ss_pred eccccccCCCCceEEEEeecCHHHHHHHHHHHhhcccc-CChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHH
Q 018172 183 FTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIG-VSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQV 261 (360)
Q Consensus 183 ~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 261 (360)
.|+||.++ |+|+||+++ ++++++.+.........+ .+...+.++..++..... ..+++.++++.++++++.+.
T Consensus 244 ~s~sK~l~--G~~gG~i~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~---~~~~~~~~~~~~~~~~l~~~ 317 (447)
T 3h7f_A 244 TTVHKTLG--GGRSGLIVG-KQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAAT---PEFADRQRRTLSGARIIADR 317 (447)
T ss_dssp EESSGGGC--CCSCEEEEE-CGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTS---HHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCcCCC--CCCeEEEEE-CHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhC---HHHHHHHHHHHHHHHHHHHH
Confidence 99999875 789999998 788888887765433333 333334555555543322 57788999999999999999
Q ss_pred HHhc----CCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHHhhCeeee----CCCCCCC-CCCeEEE
Q 018172 262 IRQS----GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLRAERIMAR----GGRRFGA-DAKYARV 328 (360)
Q Consensus 262 l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gI~~~----pg~~f~~-~~~~~R~ 328 (360)
|.+. +++.+.... ..++++|+++.. ...+.++|+++||.++ |+..++. .++++|+
T Consensus 318 L~~~~~~~~g~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRi 385 (447)
T 3h7f_A 318 LMAPDVAKAGVSVVSGG------------TDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRI 385 (447)
T ss_dssp HTSHHHHHTTCEEGGGS------------CSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------------CEEEE
T ss_pred HHhccccCCCeEEecCC------------CCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceec
Confidence 9876 233332110 223366776642 2778888888899998 6532222 3678999
Q ss_pred Eec------CChHHHHHHHHHHHHHHhch
Q 018172 329 SML------SREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 329 s~~------~~~e~~~~~~~~l~~~~~~~ 351 (360)
+.. .+++++++++++|.+++.+.
T Consensus 386 g~~~~~~~~~~~eei~~~~~~l~~~l~~~ 414 (447)
T 3h7f_A 386 GTPALATRGFGDTEFTEVADIIATALATG 414 (447)
T ss_dssp ECHHHHHHTCCHHHHHHHHHHHHHHHHSG
T ss_pred cCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 863 36899999999999998764
No 193
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.90 E-value=3.2e-23 Score=198.40 Aligned_cols=277 Identities=11% Similarity=0.009 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHH-HHHHHHHhhcC--CCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeec
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQ-LYQAALYALSS--PGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWD 115 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~-~l~~~~~~l~~--~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~ 115 (360)
.++|+.+++++|. +.+ +++|+|+|+ ++..++..+.. +++. |+++.++|.++...++..|++++.++
T Consensus 136 ~~~~~~la~~~g~------~~~-~~~t~g~te~a~~~al~~~~~~~~~~~----vi~~~~~h~s~~~~~~~~G~~~~~v~ 204 (456)
T 2z67_A 136 NKILESFFKQLGL------NVH-AIATPISTGMSISLCLSAARKKYGSNV----VIYPYASHKSPIKAVSFVGMNMRLVE 204 (456)
T ss_dssp HHHHHHHHHHTTC------CCE-EEEESSCHHHHHHHHHHHHHHHHCCCE----EEEECCCCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHcCC------CCC-EEEeCcHHHHHHHHHHHHHHHhcCCCE----EEEECCCcHHHHHHHHHcCCCceEEE
Confidence 4577778888875 444 999999994 55545555433 5565 89899999999999999999998876
Q ss_pred C---C------ccccc----c---CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCC--cC-CC-
Q 018172 116 G---D------ANTFD----K---NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYT--PI-TG- 174 (360)
Q Consensus 116 ~---~------~~~~~----~---~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~--~~-~~- 174 (360)
. + .+.++ . .+++.+|++++||||||.+.+ +++.++|+++|+++++|++|+..... +. ..
T Consensus 205 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~ 284 (456)
T 2z67_A 205 TVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKA 284 (456)
T ss_dssp CEEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHH
T ss_pred EeccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHh
Confidence 5 2 22221 1 146778889999999999988 78888899899999999999854321 11 10
Q ss_pred -CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHH
Q 018172 175 -AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSE 253 (360)
Q Consensus 175 -~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 253 (360)
..+.++++.|++|.++ .+.++||++++++++++.+......+..+.+...+.++...+. ...+++..+++.+
T Consensus 285 ~~~~~D~~~~s~hK~~~-~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~------~~~~~~~~~~~~~ 357 (456)
T 2z67_A 285 FKYRVDAVVSSSDKNLL-TPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMG------SKNYLELVKNQKN 357 (456)
T ss_dssp HTSCCSEEEEEHHHHHC-CCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH------HHHHHHHHHHHHH
T ss_pred hCCCCCEEEEcCCCCcC-CCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH------HHHHHHHHHHHHH
Confidence 1156789999999665 6688999999668888877433221111122333433333332 2677889999999
Q ss_pred HHHHHHHHHHhcC---CcccCCCCCcccccccccCCCCCCcccccC--Cch-HHHHHHHHhhCe---eee------CCCC
Q 018172 254 RWNMLRQVIRQSG---VFGLPEYPLEYCNFTGKFTNSHPGFAWLES--KED-EDCEKLLRAERI---MAR------GGRR 318 (360)
Q Consensus 254 ~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~l~~~gI---~~~------pg~~ 318 (360)
+++++.+.|++++ +..+..+. +++++++ ++. ..+.+.|.++|| -+. +|..
T Consensus 358 ~~~~l~~~L~~~~~~~g~~v~~~~---------------~~v~~~~~~~~~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~ 422 (456)
T 2z67_A 358 SKKLLDELLNDLSKKTGGKFLDVE---------------SPIASCISVNSDPVEIAAKLYNLRVTGPRGIKKTDHFGNCY 422 (456)
T ss_dssp HHHHHHHHHHHHHHHSSCCBCCCC---------------CSSEEEEECSSCHHHHHHHHHHTTEESCEEECTTCHHHHTC
T ss_pred HHHHHHHHHHhcccccCCEecCCC---------------CeEEEEEecccHHHHHHHHHHHcCCCcceEEeecCcccccc
Confidence 9999999999884 44444333 2455555 443 567777888876 232 1333
Q ss_pred CCC-CCCeEEEEecC--ChHHHHHHHHHHHHHH
Q 018172 319 FGA-DAKYARVSMLS--REEIFNIFLERLSAIQ 348 (360)
Q Consensus 319 f~~-~~~~~R~s~~~--~~e~~~~~~~~l~~~~ 348 (360)
+.. ..+++|+|++. ++|++++++++|++++
T Consensus 423 ~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 423 LGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp SSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred ccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 322 35799999874 8999999999998754
No 194
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.90 E-value=1.8e-23 Score=199.70 Aligned_cols=275 Identities=11% Similarity=0.027 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC--------CCCCCCceEEEeCCCCCCcHH-HHHHhC-
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS--------PGGPEPISVVSAAPYYSQYPA-ETDYLR- 108 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~--------~gd~~~~~vl~~~p~~~~~~~-~~~~~g- 108 (360)
.++++.++++++. ..++|++|+|+++++..++..+.. +++. |++.+|+|..... .+...|
T Consensus 96 ~~l~~~la~~~~~------~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~----vi~~~~~yhg~~~~~~~~~g~ 165 (449)
T 3a8u_X 96 FQLAEKITDLTPG------NLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTK----MIGRARGYHGVNIAGTSLGGV 165 (449)
T ss_dssp HHHHHHHHTTSST------TEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCE----EEEETTCCCCSSHHHHHHCCC
T ss_pred HHHHHHHHHhCCC------CCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCE----EEEECCCcCCCChhhhhccCC
Confidence 5666666666542 346899999999999999988763 5666 9999999998754 454443
Q ss_pred -------------CeeeeecC---------C--------cccccc--C----CCeeEEEEcCCCCCCcccch-----HHH
Q 018172 109 -------------SGLYKWDG---------D--------ANTFDK--N----NGAYIEVVNSPNNPDGTIRE-----AVL 147 (360)
Q Consensus 109 -------------~~~~~~~~---------~--------~~~~~~--~----~~~~~i~~~~p~NPtG~~~~-----~~~ 147 (360)
...+.++. | .+.++. + +++++|+++..+||||.+.+ +.+
T Consensus 166 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l 245 (449)
T 3a8u_X 166 NGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRN 245 (449)
T ss_dssp HHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHH
T ss_pred hhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHH
Confidence 22333222 2 111111 1 34555555444578997554 567
Q ss_pred HHHhhhcCcEEEEeecccCCC-CCcC-C-C--CCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHH--------
Q 018172 148 AKVNRSAEGKLIHDLAYYWPQ-YTPI-T-G--AADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRF-------- 213 (360)
Q Consensus 148 ~~~~~~~~~~li~D~ay~~~~-~~~~-~-~--~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~-------- 213 (360)
.++|+++|+++|+||+|.+.. .... . . ....++ .|+||.++ .| +|+||+++ ++++++.+...
T Consensus 246 ~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di--~s~sK~l~-~G~~~~G~~~~-~~~~~~~l~~~~~~~~~~~ 321 (449)
T 3a8u_X 246 REICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDL--MCIAKQVT-NGAIPMGAVIA-STEIYQTFMNQPTPEYAVE 321 (449)
T ss_dssp HHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSE--EEECGGGG-TTSSCCEEEEE-EHHHHHHHHTCSSCTTSCS
T ss_pred HHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCE--EEEccccc-CCCCceEEEEE-CHHHHHHhhccCccccccc
Confidence 788999999999999996322 1111 0 1 111233 38899999 68 99999998 78888888753
Q ss_pred -HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcc
Q 018172 214 -IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFA 292 (360)
Q Consensus 214 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (360)
....+++.|++++.++.++++.+.+ +...++++++++++.+.|++++.+.... ..++.++|+
T Consensus 322 ~~~~~t~~~~~~~~aa~~aal~~~~~------~~~~~~~~~~~~~l~~~L~~l~~~~~~~-----------~~~~~g~~~ 384 (449)
T 3a8u_X 322 FPHGYTYSAHPVACAAGLAALCLLQK------ENLVQSVAEVAPHFEKALHGIKGAKNVI-----------DIRNFGLAG 384 (449)
T ss_dssp SCCCCTTTTCHHHHHHHHHHHHHHHH------TTHHHHHHHHHHHHHHHHHTTTTSTTEE-----------EEEEETTEE
T ss_pred ccccCCCcccHHHHHHHHHHHHHHHh------cCHHHHHHHHHHHHHHHHHHHhcCCCeE-----------EEeeeEEEE
Confidence 1224567788999888888874321 2456777888888888887753221110 011344577
Q ss_pred cccCCch--------HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEe--cCChHHHHHHHHHHHHHHhc
Q 018172 293 WLESKED--------EDCEKLLRAERIMARGGRRFGADAKYARVSM--LSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 293 ~~~~~~~--------~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~ 350 (360)
|+.+++. ..+.+.|.++||.++|+ + +++||++ ..+++++++++++|++++++
T Consensus 385 ~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~---g---~~iRis~~~~~t~~~i~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 385 AIQIAPRDGDAIVRPFEAGMALWKAGFYVRFG---G---DTLQFGPTFNSKPQDLDRLFDAVGEVLNK 446 (449)
T ss_dssp EEEECCBTTBSSHHHHHHHHHHHHHTEECEEE---T---TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCcccccccHHHHHHHHHHCCcEEecC---C---CEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 8777532 15777777889999986 1 6899995 45999999999999998864
No 195
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.90 E-value=5.1e-22 Score=185.39 Aligned_cols=279 Identities=13% Similarity=0.107 Sum_probs=194.8
Q ss_pred HHHHHHH-HHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-cCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecC
Q 018172 39 PELAEAI-NNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-SSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDG 116 (360)
Q Consensus 39 ~~lr~~l-a~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 116 (360)
.+||+++ +++++. . .++++++|+|++++.++..+ +++||+ |+++.|+|..+...+...|++++.+++
T Consensus 39 ~~l~~~~~a~~~g~------~-~~~v~~~sgt~al~~al~~l~~~~Gd~----Vi~~~~~~~~~~~~~~~~G~~~~~v~~ 107 (377)
T 3ju7_A 39 QRFEQTIMSGFFQN------R-GAVTTVANATLGLMAAIQLKKRKKGKY----ALMPSFTFPATPLAAIWCGLEPYFIDI 107 (377)
T ss_dssp HHHHHHHHHHTSTT------C-SEEEEESCHHHHHHHHHHHHSCTTCCE----EEEESSSCTHHHHHHHHTTCEEEEECB
T ss_pred HHHHHHHHHHHhCC------C-CeEEEeCCHHHHHHHHHHHcCCCCcCE----EEECCCCcHHHHHHHHHcCCEEEEEec
Confidence 8999999 999983 2 46899999999999999998 899998 999999999999999999999999987
Q ss_pred Ccccccc----------CCC--eeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcC--CCCCCccEE
Q 018172 117 DANTFDK----------NNG--AYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPI--TGAADHDIM 181 (360)
Q Consensus 117 ~~~~~~~----------~~~--~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~--~~~~~~~i~ 181 (360)
+.+.+.. +++ +++|+ |+||||...+ +.+.++|+ +|+++|+|++|+.+..... .+....++.
T Consensus 108 ~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~ 183 (377)
T 3ju7_A 108 SIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMI 183 (377)
T ss_dssp CTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEE
T ss_pred CCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEE
Confidence 6443222 234 88887 7889999988 78888999 9999999999985432111 111113455
Q ss_pred Eecc--ccccCCCCceEEEEeecCHHHHHHHHHHHhhc------------cccCChHHHHHHHHHhcccCCCchhHHHHH
Q 018172 182 LFTL--SKCTGHAGSRIGWALVKDTEVARKMTRFIELG------------SIGVSKESQLRAAKILGIVSDDYPNFFEYG 247 (360)
Q Consensus 182 ~~S~--sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (360)
+.|| +|.++ +| +.|++++.++++.+.++..+..+ ....+.+.+..+...+ +.++..
T Consensus 184 ~~S~~~~K~l~-~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l--------~~l~~~ 253 (377)
T 3ju7_A 184 IYSFHATKPFG-IG-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATM--------KKWDDK 253 (377)
T ss_dssp EEECBTTSSSC-CB-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHH--------HTHHHH
T ss_pred EEECCCCCcCC-CC-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHH--------HHHHHH
Confidence 6665 69998 45 67888887899999988876532 1223334333332322 445566
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccC-CCCCcccccccccCCCCCCcccccCCc---hHHHHHHHHhhCeeeeCCCC--CCC
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLP-EYPLEYCNFTGKFTNSHPGFAWLESKE---DEDCEKLLRAERIMARGGRR--FGA 321 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~pg~~--f~~ 321 (360)
.++.+++.+++.+.|++++++... .+..... ....|+.+.+++ .+.+.+.|+++||.++.+.. ...
T Consensus 254 ~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~ 325 (377)
T 3ju7_A 254 LKERTRISEWYKQLLQSNGLMKKGWQLQKTEA--------VIQQFMPILCPEEVRNKQVIEDLKKQKIEARLYFSPSCHQ 325 (377)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSC--------BCCSSEEEECCTTSCHHHHHHHHHTTTBCCBCTTSSCGGG
T ss_pred HHHHHHHHHHHHHHhcCCCCccccccCCCCCc--------ceEEEEEEEeCChhhHHHHHHHHHHCCCceecccCCcccc
Confidence 667777778888888888654221 1211110 111133455554 48899999999999987652 100
Q ss_pred ------------------CCCeEEEEecC--ChHHHHHHHHHHHHHHhc
Q 018172 322 ------------------DAKYARVSMLS--REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 322 ------------------~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~ 350 (360)
..+.+|+++.. ++|++++.++.|++++.+
T Consensus 326 ~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 326 QVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVS 374 (377)
T ss_dssp SGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC----
T ss_pred chhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 02359999866 899999999999988765
No 196
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.90 E-value=1.1e-22 Score=196.83 Aligned_cols=270 Identities=12% Similarity=0.034 Sum_probs=187.3
Q ss_pred EcCChHHHHHHHHHhhcCC--------CCCC-CceEEEeCCCCCCcHHHHHHhCCeeeeecCCcccccc---------CC
Q 018172 64 IGTGSTQLYQAALYALSSP--------GGPE-PISVVSAAPYYSQYPAETDYLRSGLYKWDGDANTFDK---------NN 125 (360)
Q Consensus 64 ~t~G~t~~l~~~~~~l~~~--------gd~~-~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~---------~~ 125 (360)
+|+|+++++.+++.++..+ |+.. ...|+++.++|..+...++..|++++.++.+.+.+.. ++
T Consensus 122 ~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~ 201 (502)
T 3hbx_A 122 GTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDE 201 (502)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCT
T ss_pred ecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHhh
Confidence 5899999999988887554 6511 1139999999999999999999999999876542221 46
Q ss_pred CeeEEEEcCCCCCCcccch-HHHHHHhhhc------CcEEEEeecccCC-------CCCcCCCCCCccEEEeccccccCC
Q 018172 126 GAYIEVVNSPNNPDGTIRE-AVLAKVNRSA------EGKLIHDLAYYWP-------QYTPITGAADHDIMLFTLSKCTGH 191 (360)
Q Consensus 126 ~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~------~~~li~D~ay~~~-------~~~~~~~~~~~~i~~~S~sK~~~~ 191 (360)
++++|++++|+||||.+.+ +.+.++|+++ |+++++|++|++. .........+.+.+..|.+|.++
T Consensus 202 ~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~- 280 (502)
T 3hbx_A 202 NTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL- 280 (502)
T ss_dssp TEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTC-
T ss_pred CCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccC-
Confidence 8999999999999999988 7788888878 9999999999842 22222234466788899999664
Q ss_pred CCceEEEEeecCHHHHHHHHHHH-hhcc---------ccC---ChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 192 AGSRIGWALVKDTEVARKMTRFI-ELGS---------IGV---SKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 192 ~G~r~G~~~~~~~~~~~~l~~~~-~~~~---------~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
.+.++||++..+++.+....... .+.. .+. ....+.++...+. .+.+.+..++..++.+++
T Consensus 281 ~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg------~~g~~~~~~~~~~~a~~l 354 (502)
T 3hbx_A 281 VYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG------HEGYRNVMENCRENMIVL 354 (502)
T ss_dssp CCSSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHH
Confidence 66789988885555432211100 0000 111 1223333333222 155677888888889999
Q ss_pred HHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch-----HHHHHHHHhhCeeeeCCCCCCC--CCCeEEEEec
Q 018172 259 RQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED-----EDCEKLLRAERIMARGGRRFGA--DAKYARVSML 331 (360)
Q Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~gI~~~pg~~f~~--~~~~~R~s~~ 331 (360)
.+.|++++++.+..+. ...+++.+++++. ..+.+.|.++||.+........ ...++|+++.
T Consensus 355 ~~~L~~~~~~~~~~~~------------~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~ 422 (502)
T 3hbx_A 355 REGLEKTERFNIVSKD------------EGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIR 422 (502)
T ss_dssp HHHHHTTTCEEECSCS------------SSSSEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECC
T ss_pred HHHHHhCCCEEEEeCC------------CCceEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeC
Confidence 9999999877765441 1123555555431 4788999999999754322211 2458999996
Q ss_pred C--ChHHHHHHHHHHHHHHhchh
Q 018172 332 S--REEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 332 ~--~~e~~~~~~~~l~~~~~~~~ 352 (360)
. ++|+++.+++.|+++++..+
T Consensus 423 ~~~t~edid~li~~L~~~l~~l~ 445 (502)
T 3hbx_A 423 EDFSRTLAERLVIDIEKVMRELD 445 (502)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Confidence 5 89999999999999987654
No 197
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.90 E-value=7.6e-22 Score=187.89 Aligned_cols=281 Identities=14% Similarity=0.065 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh---------cCCCCCCCceEEEeCCCCCCcHHHHHHhCC
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL---------SSPGGPEPISVVSAAPYYSQYPAETDYLRS 109 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l---------~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~ 109 (360)
.++|++++++++. + ++++++|+++++..++.++ +++||+ |+++.|+|..+...+...|+
T Consensus 65 ~~l~~~la~~~g~-------~-~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~----Vi~~~~~~~~~~~~~~~~g~ 132 (437)
T 3bb8_A 65 DAFEKKLGEYLGV-------P-YVLTTTSGSSANLLALTALTSPKLGVRALKPGDE----VITVAAGFPTTVNPTIQNGL 132 (437)
T ss_dssp HHHHHHHHHHHTC-------S-EEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCE----EEECSSSCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHCC-------C-cEEEeCCHHHHHHHHHHHhhhcccccccCCCcCE----EEECCCCcHHHHHHHHHcCC
Confidence 9999999999985 2 5777777889999999998 788887 99999999999999999999
Q ss_pred eeeeecCCcc-------cccc--CCCeeEEEEcC-CCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCC-
Q 018172 110 GLYKWDGDAN-------TFDK--NNGAYIEVVNS-PNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAAD- 177 (360)
Q Consensus 110 ~~~~~~~~~~-------~~~~--~~~~~~i~~~~-p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~- 177 (360)
+++.++.+.+ .+.. ++++++|++++ |+|| .+ +.+.++|+++|+++|+|++|..+..... ...+
T Consensus 133 ~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~g~~----~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~~~ 207 (437)
T 3bb8_A 133 IPVFVDVDIPTYNVNASLIEAAVSDKTKAIMIAHTLGNL----FDLAEVRRVADKYNLWLIEDCCDALGSTYDG-KMAGT 207 (437)
T ss_dssp EEEECCEETTTTEECGGGHHHHCCTTEEEEEEECGGGCC----CCHHHHHHHHHHHTCEEEEECTTCTTCEETT-EETTS
T ss_pred EEEEEeccCccCCcCHHHHHHhcCCCCeEEEEeCCCCCh----hcHHHHHHHHHHcCCEEEEECccccCceECC-eeccc
Confidence 9998876532 2221 45789998874 5555 44 6777888889999999999985432211 1111
Q ss_pred -ccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhcc-------------------------------------c
Q 018172 178 -HDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGS-------------------------------------I 219 (360)
Q Consensus 178 -~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~-------------------------------------~ 219 (360)
.++++.||+|.++++|.++|+++++++.+.+.+........ +
T Consensus 208 ~~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 287 (437)
T 3bb8_A 208 FGDIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGY 287 (437)
T ss_dssp SSSEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCC
T ss_pred ccCEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCc
Confidence 35888999988888999999999944544444443221100 0
Q ss_pred --cCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCccc-ccC
Q 018172 220 --GVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAW-LES 296 (360)
Q Consensus 220 --~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 296 (360)
..+.+...++.+.++ .+++..++.+++.+++.+.|++++++......... ...+..+|+. ++.
T Consensus 288 ~~~~~~~~aa~~l~~l~--------~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~ 353 (437)
T 3bb8_A 288 NLKITDMQAACGLAQLE--------RIEEFVEKRKANFKYLKDALQSCADFIELPEATEN------SDPSWFGFPITLKE 353 (437)
T ss_dssp BCCCBHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTT------EECCCSSEEEEECG
T ss_pred ccCCCHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCC------CceeeEEEEEEECC
Confidence 112333333333333 22344444577778888899888543332111000 0011122332 443
Q ss_pred C---chHHHHHHHHhhCeeeeCCCCCCC--C---------------------CCeEEEEecC--ChHHHHHHHHHHHHHH
Q 018172 297 K---EDEDCEKLLRAERIMARGGRRFGA--D---------------------AKYARVSMLS--REEIFNIFLERLSAIQ 348 (360)
Q Consensus 297 ~---~~~~~~~~l~~~gI~~~pg~~f~~--~---------------------~~~~R~s~~~--~~e~~~~~~~~l~~~~ 348 (360)
+ +.+.+.+.|.++||.++++..... . .+.+|+++.. +++|+++++++|++++
T Consensus 354 ~~~~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~ 433 (437)
T 3bb8_A 354 DSGVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFF 433 (437)
T ss_dssp GGSSCHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHT
T ss_pred cCcCcHHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHH
Confidence 3 337788889999999998754110 0 1248999866 8999999999999987
Q ss_pred hc
Q 018172 349 GG 350 (360)
Q Consensus 349 ~~ 350 (360)
..
T Consensus 434 ~~ 435 (437)
T 3bb8_A 434 GL 435 (437)
T ss_dssp TT
T ss_pred cc
Confidence 64
No 198
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.90 E-value=9e-23 Score=193.80 Aligned_cols=291 Identities=11% Similarity=-0.019 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc--CCCCCCCceEEEeCCCCCCcHHHHH-HhC-------
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS--SPGGPEPISVVSAAPYYSQYPAETD-YLR------- 108 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~--~~gd~~~~~vl~~~p~~~~~~~~~~-~~g------- 108 (360)
.+|++.++++++ ..++|++|+|+++++..++..+. ..++. |++.+++|......+. ..+
T Consensus 96 ~~la~~l~~~~~-------~~~~v~~~~sGsea~~~al~~a~~~~~~~~----ii~~~~~yhg~~~~~~~~~~~~~~~~~ 164 (429)
T 4e77_A 96 VKMAQLVTDLVP-------TMDMVRMVNSGTEATMSAIRLARGYTGRDK----IIKFEGCYHGHADCLLVKAGSGALTLG 164 (429)
T ss_dssp HHHHHHHHHHST-------TCSEEEEESSHHHHHHHHHHHHHHHHCCCE----EEEETTCCCC-----------------
T ss_pred HHHHHHHHhhCC-------CCCEEEEeCcHHHHHHHHHHHHHHhhCCCE----EEEEcCccCCCChhhhhhcCCcccccC
Confidence 556666666553 24589999999999999988653 23444 8998899887754211 111
Q ss_pred ------------CeeeeecC-Ccccccc----C-CCeeEEEEcCCCCC-Ccccch-----HHHHHHhhhcCcEEEEeecc
Q 018172 109 ------------SGLYKWDG-DANTFDK----N-NGAYIEVVNSPNNP-DGTIRE-----AVLAKVNRSAEGKLIHDLAY 164 (360)
Q Consensus 109 ------------~~~~~~~~-~~~~~~~----~-~~~~~i~~~~p~NP-tG~~~~-----~~~~~~~~~~~~~li~D~ay 164 (360)
..+..++. |.+.++. . +++++| +.+|+|| +|.+.+ +.+.++|+++|+++|+||+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~v-i~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~ 243 (429)
T 4e77_A 165 QPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACI-IVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVM 243 (429)
T ss_dssp -CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEE-EECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETT
T ss_pred CCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEE-EECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 11222222 2222221 1 344444 4566655 566554 56788999999999999999
Q ss_pred cCCCCCcCC--CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHH---HhhccccCChHHHHHHHHHhcccCCC
Q 018172 165 YWPQYTPIT--GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRF---IELGSIGVSKESQLRAAKILGIVSDD 239 (360)
Q Consensus 165 ~~~~~~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (360)
.+....... ...+...-+.|+||.++ +|+|+||+++ ++++++.+... ....+++.|++++.++.++++.+.+.
T Consensus 244 ~g~r~g~~~~~~~~~~~pdi~t~sK~~~-~G~~~G~~~~-~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~ 321 (429)
T 4e77_A 244 TGFRVALAGAQDYYHVIPDLTCLGKIIG-GGMPVGAFGG-RREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQV 321 (429)
T ss_dssp TBTTTBTTCHHHHTTCCCSEEEEEGGGG-TTSCCEEEEE-CHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTST
T ss_pred cCcccCcchHHHhcCCCCCeeeeccccc-CCCCeEEEEE-CHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 843111110 11111112459999999 8999999998 89998887653 12356688999999999988866442
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCC
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGG 316 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg 316 (360)
..+++.++.....++.+.+.+..++........|.+..+.-.......+|..+..++. ..+.+.|.++||.++|+
T Consensus 322 --~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~ 399 (429)
T 4e77_A 322 --GVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPS 399 (429)
T ss_dssp --THHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSS
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEeec
Confidence 5555555555555555555555554322221112211110000000111222222222 56777788899999986
Q ss_pred CCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 317 RRFGADAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 317 ~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
. ...+|+++..++|++++++++|++++.+
T Consensus 400 ~-----~~~~~~~~~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 400 A-----FEAGFMSLAHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp T-----TSCEECCTTCCHHHHHHHHHHHHHHHTT
T ss_pred C-----CCCEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 4 2356777766999999999999999864
No 199
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.90 E-value=6.4e-23 Score=194.34 Aligned_cols=287 Identities=16% Similarity=0.108 Sum_probs=189.9
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH----HHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET----DYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~----~~~g~~~~~ 113 (360)
..++|++++++++. ++.+++++ +++++..++..++++||+ |+++.++|..+...+ +..|++++.
T Consensus 60 ~~~l~~~la~~~g~-------~~~v~~~s-Gt~A~~~~l~~~~~~gd~----vi~~~~~~~~~~~~~~~~~~~~g~~~~~ 127 (421)
T 2ctz_A 60 VDVLEKRLAALEGG-------KAALATAS-GHAAQFLALTTLAQAGDN----IVSTPNLYGGTFNQFKVTLKRLGIEVRF 127 (421)
T ss_dssp HHHHHHHHHHHHTC-------SEEEEESS-HHHHHHHHHHHHCCTTCE----EEECSCCCHHHHHHHHTHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhCC-------CceEEecC-HHHHHHHHHHHHhCCCCE----EEEeCCCchHHHHHHHHHHHHcCCEEEE
Confidence 38999999999985 34555555 599999999999999998 999999999887765 678999998
Q ss_pred e-cCC-cccccc--CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecc-cCCCC-CcCCCCCCccEEEeccc
Q 018172 114 W-DGD-ANTFDK--NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAY-YWPQY-TPITGAADHDIMLFTLS 186 (360)
Q Consensus 114 ~-~~~-~~~~~~--~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay-~~~~~-~~~~~~~~~~i~~~S~s 186 (360)
+ +.+ .+.+.. ++++++|++++|+||||.+.+ +.+.++|+++|+++|+|++| ..+.. .++ ..+.+++++|+|
T Consensus 128 ~~~~~d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~~~~--~~~~Di~~~s~~ 205 (421)
T 2ctz_A 128 TSREERPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLLRPL--AWGAALVTHSLT 205 (421)
T ss_dssp CCTTCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSCCGG--GGTCSEEEEETT
T ss_pred ECCCCCHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccCCcc--ccCCeEEEECCc
Confidence 8 764 334432 468999999999999999998 77888899999999999999 64321 122 345789999999
Q ss_pred cccCCCCceEEEEeecC--HHH----HHHHHH----------------------H----HhhccccCChHHHHHHHHHhc
Q 018172 187 KCTGHAGSRIGWALVKD--TEV----ARKMTR----------------------F----IELGSIGVSKESQLRAAKILG 234 (360)
Q Consensus 187 K~~~~~G~r~G~~~~~~--~~~----~~~l~~----------------------~----~~~~~~~~~~~~~~~~~~~l~ 234 (360)
|.++.+|.|+|++++.+ .++ .+.+.. . ....+...++....++...++
T Consensus 206 K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~ 285 (421)
T 2ctz_A 206 KWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGME 285 (421)
T ss_dssp TTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHT
T ss_pred ccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcc
Confidence 99998999999888842 111 111210 0 011122444454444444443
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcc----cccccccC-CCCCCcccccCCch-HHHHHHHHh
Q 018172 235 IVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEY----CNFTGKFT-NSHPGFAWLESKED-EDCEKLLRA 308 (360)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~~ 308 (360)
. +....++..++.+++.+.|.+++++....+++.. +....... .+.+..+.+.+++. +.....+.+
T Consensus 286 -------~-l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~~~~~~~~~~ 357 (421)
T 2ctz_A 286 -------T-LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFISR 357 (421)
T ss_dssp -------T-HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHHHHHHHHHHT
T ss_pred -------h-HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHh
Confidence 2 3334445557888999999998776654222110 00000000 24455677777653 444444444
Q ss_pred ---hCeeeeCCCCC----------------------CCCCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 309 ---ERIMARGGRRF----------------------GADAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 309 ---~gI~~~pg~~f----------------------~~~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
.++.+..|... |..++.+|+|++. |+++.+++.|.+.+
T Consensus 358 l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~--e~~~~li~~l~~al 420 (421)
T 2ctz_A 358 LKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL--EHVEDLKAELKEAL 420 (421)
T ss_dssp CSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHT
T ss_pred CCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHHHh
Confidence 34455544211 2235799999854 46778888887765
No 200
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.90 E-value=7.5e-23 Score=194.19 Aligned_cols=277 Identities=13% Similarity=0.057 Sum_probs=177.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc--CCCCCCCceEEEeCCCCCCcHHHHHHh-CCe-----
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS--SPGGPEPISVVSAAPYYSQYPAETDYL-RSG----- 110 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~--~~gd~~~~~vl~~~p~~~~~~~~~~~~-g~~----- 110 (360)
.+|++.++++++ ..++|++|+|+++++..++.... ..++. |++.+|+|..+...+... |..
T Consensus 95 ~~la~~l~~~~~-------~~~~v~~~~ggsea~~~al~~a~~~~~~~~----vi~~~~~yhg~~~~~~~~~~~~~~~~~ 163 (427)
T 3fq8_A 95 NVLAEMVNDAVP-------SIEMVRFVNSGTEACMAVLRIMRAYTGRDK----IIKFEGCYHGHADMFLVKAGSGVATLG 163 (427)
T ss_dssp HHHHHHHHHHST-------TCSEEEEESSHHHHHHHHHHHHHHHHCCCE----EEEEETCCCCSCGGGCSSCCTHHHHHT
T ss_pred HHHHHHHHHhCC-------CCCEEEEeCCHHHHHHHHHHHHHHhhCCCE----EEEECCCcCCCCHHHHHhcCCcccccC
Confidence 445555555443 24589999999999999985442 22344 999889998755433222 111
Q ss_pred --------------eeeecC-Ccccccc-----CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeeccc
Q 018172 111 --------------LYKWDG-DANTFDK-----NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYY 165 (360)
Q Consensus 111 --------------~~~~~~-~~~~~~~-----~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~ 165 (360)
+..++. |.+.++. ..++++|+++.++|++|.+.+ +.+.++|+++|+++|+||+|.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~ 243 (427)
T 3fq8_A 164 LPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVIT 243 (427)
T ss_dssp CCSCSSSCHHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT
T ss_pred CCCCCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 222222 2233322 236778888878888998876 467789999999999999998
Q ss_pred CCCCCcC---CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHH---hhccccCChHHHHHHHHHhcccCCC
Q 018172 166 WPQYTPI---TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFI---ELGSIGVSKESQLRAAKILGIVSDD 239 (360)
Q Consensus 166 ~~~~~~~---~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (360)
+. .... ....+...-+.|+||.++ +|+|+||+++ ++++++.+.... ...+++.|++++.++.++++.+.+.
T Consensus 244 g~-~~g~~~~~~~~~~~~di~t~sK~~~-~G~~~G~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~ 320 (427)
T 3fq8_A 244 GF-RIAYGGVQEKFGVTPDLTTLGKIIG-GGLPVGAYGG-KREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQP 320 (427)
T ss_dssp BT-TTBTTHHHHHTTCCCSEEEECGGGG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTST
T ss_pred cc-ccCcchhhHhcCCCCChhhhhhhhh-CCcceEEEEE-cHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhc
Confidence 43 1111 011122222568899999 8999999998 899988886532 2345677999999999888765432
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-------------ch---HHHH
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-------------ED---EDCE 303 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~---~~~~ 303 (360)
...++.++..+..++.+.+.+..++...... +.++++|+.+. +. ..+.
T Consensus 321 --~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 384 (427)
T 3fq8_A 321 --GTYEYLDQITKRLSDGLLAIAQETGHAACGG--------------QVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFH 384 (427)
T ss_dssp --THHHHHHHHHHHHHHHHHHHHHHTTCCCEEE--------------EETTEEEEESSSCCCCSHHHHTTSCHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE--------------EeeeEEEEEEecCccccccccccccHHHHHHHH
Confidence 4455555444444444544444443211111 12224444432 21 4577
Q ss_pred HHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhc
Q 018172 304 KLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 304 ~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
+.|.++||.++|+. ...+|+++..++|++++++++|++++.+
T Consensus 385 ~~l~~~Gi~v~~~~-----~~r~~~~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 385 RGMLEQGIYLAPSQ-----FEAGFTSLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp HHHHHTTEECCSST-----TSCEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCcEEecCC-----CCCEEeeCcCCHHHHHHHHHHHHHHHHh
Confidence 78888999999864 2356666666999999999999998863
No 201
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.90 E-value=1.5e-22 Score=192.76 Aligned_cols=279 Identities=16% Similarity=0.118 Sum_probs=186.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHh-hcCCCCCCCceEEEeCCCCCCcHHHH----HHhCCeeee
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYA-LSSPGGPEPISVVSAAPYYSQYPAET----DYLRSGLYK 113 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~-l~~~gd~~~~~vl~~~p~~~~~~~~~----~~~g~~~~~ 113 (360)
.++++.+++++|. +.+++++++|++.+...+... ..++||+ |+++.++|+.+...+ +..|++++.
T Consensus 111 ~~~~~~la~~~g~------~~~~i~~~~g~taa~ea~~~a~~~~~gd~----Viv~~~~h~s~~~~~~~~a~~~G~~v~~ 180 (438)
T 1wyu_A 111 FEYQTMIAELAGL------EIANASMYDGATALAEGVLLALRETGRMG----VLVSQGVHPEYRAVLRAYLEAVGAKLLT 180 (438)
T ss_dssp HHHHHHHHHHHTS------SEECSCBSSHHHHHHHHHHHHHHHHTCCE----EEEETTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhCC------CccceEEeCcHHHHHHHHHHHHhcCCCCE----EEEcCccCHhHHHHHHHHHHHCCCEEEE
Confidence 6788888888885 445789999999443333332 2467887 999999999988665 447999998
Q ss_pred ecCCccccc---cCCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeec-ccCCCCCcCCCCCCccEEEeccccc
Q 018172 114 WDGDANTFD---KNNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLA-YYWPQYTPITGAADHDIMLFTLSKC 188 (360)
Q Consensus 114 ~~~~~~~~~---~~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~a-y~~~~~~~~~~~~~~~i~~~S~sK~ 188 (360)
++.+...++ .++++++|++++| ||||.+.+ +.+.++|+++|+++++|.. .+.+.. ...+..+.+++++| +|.
T Consensus 181 v~~~~~~~d~~~i~~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~-~~~~~~g~D~~~~s-~kk 257 (438)
T 1wyu_A 181 LPLEGGRTPLPEVGEEVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVL-KPPGAYGADIAVGD-GQS 257 (438)
T ss_dssp ECCBTTBCCCCCCCTTEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTB-CCHHHHTCSEEEEE-CTT
T ss_pred EcCcCCccCHHHhCCCeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCc-CCCccCCCCEEEEC-Ccc
Confidence 875221111 2568999999999 99999988 6788888889999996632 221111 11134456788888 665
Q ss_pred cC----CCCceEEEEeecCHHHHHHHHHH-------------------------H-hhccccC---ChHHHHHHHHHhcc
Q 018172 189 TG----HAGSRIGWALVKDTEVARKMTRF-------------------------I-ELGSIGV---SKESQLRAAKILGI 235 (360)
Q Consensus 189 ~~----~~G~r~G~~~~~~~~~~~~l~~~-------------------------~-~~~~~~~---~~~~~~~~~~~l~~ 235 (360)
|| +.|.++||+++ ++++++.+... + ...+.+. +......++..+..
T Consensus 258 ~~~~~~~~Gp~~G~l~~-~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~ 336 (438)
T 1wyu_A 258 LGLPMGFGGPHFGFLAT-KKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAA 336 (438)
T ss_dssp TTCCCGGGCSCCEEEEE-CGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHH
T ss_pred cCCCccCCCCCeeEEEE-cHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHH
Confidence 54 45668999998 67666554210 0 0112222 22222222222332
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC-chHHHHHHHHhhCeee-
Q 018172 236 VSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK-EDEDCEKLLRAERIMA- 313 (360)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gI~~- 313 (360)
+. +..++++.+++.++++++.+.|++++++.+..+.. .+. .+.++.+ +...+.+.|.++||.+
T Consensus 337 ~~---~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~-~~~-----------~~~~~~~~~~~~~~~~L~~~gi~v~ 401 (438)
T 1wyu_A 337 LG---PEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKP-FFN-----------EFALALPKDPEAVRRALAERGFHGA 401 (438)
T ss_dssp HH---HHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSS-BCS-----------EEEEECSSCHHHHHHHHHHTTCCCC
T ss_pred hC---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCC-eEE-----------EEEEeCCCCHHHHHHHHHHCCceec
Confidence 21 15578889999999999999999987666654321 110 1223333 3367777788889999
Q ss_pred -eCCCCCCCCCCeEEEEecC--ChHHHHHHHHHHHHHH
Q 018172 314 -RGGRRFGADAKYARVSMLS--REEIFNIFLERLSAIQ 348 (360)
Q Consensus 314 -~pg~~f~~~~~~~R~s~~~--~~e~~~~~~~~l~~~~ 348 (360)
.++..|+ ++++|+|+.. +++++++++++|++++
T Consensus 402 ~~~~~~~~--~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 402 TPVPREYG--ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp EECCTTSC--SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred cccccccC--CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 7777664 6799999974 8999999999998875
No 202
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.89 E-value=5.2e-23 Score=197.59 Aligned_cols=275 Identities=14% Similarity=0.104 Sum_probs=180.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC-------CCCCCCceEEEeCCCCCCcHHHHHHhCCe-
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS-------PGGPEPISVVSAAPYYSQYPAETDYLRSG- 110 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~-------~gd~~~~~vl~~~p~~~~~~~~~~~~g~~- 110 (360)
.+|++.++++++. ..++|++++|+++++..+++.+.+ ++.. +|++.+|+|..+...+...+..
T Consensus 102 ~~lae~l~~~~~~------~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~---~ii~~~~~yHg~t~~~~~~~~~~ 172 (472)
T 3hmu_A 102 IALAQKLAELAPG------DLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKT---VIISRKNAYHGSTVASSALGGMA 172 (472)
T ss_dssp HHHHHHHHHHSCT------TEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCC---EEEEETTCCCCSSHHHHHHSCCH
T ss_pred HHHHHHHHHhCCC------CCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCC---EEEEEcCcCCCccHHhhhccCCh
Confidence 4455555554431 235899999999999999998864 2322 3999999999988766655442
Q ss_pred -----------eeeecCC------------------cccccc------CCCeeEEEEcCCCCCCcccch-----HHHHHH
Q 018172 111 -----------LYKWDGD------------------ANTFDK------NNGAYIEVVNSPNNPDGTIRE-----AVLAKV 150 (360)
Q Consensus 111 -----------~~~~~~~------------------~~~~~~------~~~~~~i~~~~p~NPtG~~~~-----~~~~~~ 150 (360)
+..++.+ .+.++. .+++.+|++..++|++|.+.+ +.+.++
T Consensus 173 ~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l 252 (472)
T 3hmu_A 173 GMHAQSGLIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRI 252 (472)
T ss_dssp HHHHTTCCCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHH
T ss_pred hhccccCCCCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHH
Confidence 2233321 111211 135666777777778888764 567889
Q ss_pred hhhcCcEEEEeecccCCCCCc-CC--C--CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHH--HHhhccccCCh
Q 018172 151 NRSAEGKLIHDLAYYWPQYTP-IT--G--AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTR--FIELGSIGVSK 223 (360)
Q Consensus 151 ~~~~~~~li~D~ay~~~~~~~-~~--~--~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~--~~~~~~~~~~~ 223 (360)
|+++|+++|+||+|.+..... .. . ....+ +.+|||.++..|+|+||+++ ++++++.+.. .....+++.|+
T Consensus 253 ~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pd--i~t~sK~l~gg~~plG~v~~-~~~i~~~~~~~~~~~~~t~~~np 329 (472)
T 3hmu_A 253 CDKYDILLIADEVICGFGRTGNWFGTQTMGIRPH--IMTIAKGLSSGYAPIGGSIV-CDEVAHVIGKDEFNHGYTYSGHP 329 (472)
T ss_dssp HHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCS--EEEECGGGTTTSSCCEEEEE-EHHHHHHHTTSCBCCCCTTTTCH
T ss_pred HHHcCCEEEEEccccCCcccCccchhHHhCCCCc--eeeechhhhcCCcceEEEEE-CHHHHHhcccCCccccCCCCCCH
Confidence 999999999999998532111 11 1 11122 33688999844499999999 8999998832 12334678899
Q ss_pred HHHHHHHHHhcccCCCchhHHHHHHHHHH-HHHHHHHHHHHhc---CCcccCCCCCcccccccccCCCCCCcccccCCc-
Q 018172 224 ESQLRAAKILGIVSDDYPNFFEYGRRLMS-ERWNMLRQVIRQS---GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE- 298 (360)
Q Consensus 224 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 298 (360)
++|.++.++|+.+.+ +...+.++ ++.+++.+.|+++ +.+.... +.++|+++.+..
T Consensus 330 ~a~aAa~aaL~~~~~------~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr--------------~~G~~~~i~~~~~ 389 (472)
T 3hmu_A 330 VAAAVALENLRILEE------ENILDHVRNVAAPYLKEKWEALTDHPLVGEAK--------------IVGMMASIALTPN 389 (472)
T ss_dssp HHHHHHHHHHHHHHH------TTHHHHHHHTHHHHHHHHHHGGGGSTTEEEEE--------------EETTEEEEEECSC
T ss_pred HHHHHHHHHHHHHHH------hHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE--------------ecCceEEEEEecC
Confidence 999999998875432 23444455 5556666666554 2222222 233344444421
Q ss_pred --------------hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEE--ecCChHHHHHHHHHHHHHHhch
Q 018172 299 --------------DEDCEKLLRAERIMARGGRRFGADAKYARVS--MLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 299 --------------~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s--~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
...+.+.|.++||.++|+. +++||+ +..++|++++++++|++++.+.
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g------~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~ 452 (472)
T 3hmu_A 390 KASRAKFASEPGTIGYICRERCFANNLIMRHVG------DRMIISPPLVITPAEIDEMFVRIRKSLDEA 452 (472)
T ss_dssp GGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEET------TEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccchhHHHHHHHHHHHHHCCcEEEecC------CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2456777888999999852 699999 4559999999999999998653
No 203
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.89 E-value=5.7e-22 Score=192.16 Aligned_cols=298 Identities=10% Similarity=0.009 Sum_probs=195.1
Q ss_pred HHHHHHH----HHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcC--------CC-----CCCCceEEEeCCCCCCcH
Q 018172 39 PELAEAI----NNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSS--------PG-----GPEPISVVSAAPYYSQYP 101 (360)
Q Consensus 39 ~~lr~~l----a~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~--------~g-----d~~~~~vl~~~p~~~~~~ 101 (360)
.++++++ ++++|. +.. .+++++|+|+|+++..++..+.. +| + ..|+++.+.|.++.
T Consensus 131 ~~le~~~~~~la~~~g~---~~~-~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~---~~v~~s~~~h~s~~ 203 (504)
T 2okj_A 131 VLMEQITLKKMREIVGW---SSK-DGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPK---LVLFTSEQSHYSIK 203 (504)
T ss_dssp HHHHHHHHHHHHHHHTC---CSS-SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCC---EEEEEETTSCTHHH
T ss_pred HHHHHHHHHHHHHHhCC---CCC-CCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCC---eEEEECCcchHHHH
Confidence 4555555 455553 211 45899999999999999888753 45 4 13999999999999
Q ss_pred HHHHHhCC---eeeeecCCccc-ccc-------CC------CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeec
Q 018172 102 AETDYLRS---GLYKWDGDANT-FDK-------NN------GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLA 163 (360)
Q Consensus 102 ~~~~~~g~---~~~~~~~~~~~-~~~-------~~------~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~a 163 (360)
..++.+|. +++.++.+.++ ++. ++ ++++|++++|+||||.+.+ +.+.++|+++|+++++|++
T Consensus 204 ~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a 283 (504)
T 2okj_A 204 KAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAA 283 (504)
T ss_dssp HHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEET
T ss_pred HHHHHcCCCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehh
Confidence 99998877 88888875321 111 12 5899999999999999987 7888899999999999999
Q ss_pred ccCCCCC------cCCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHH-hhc-cc----------------
Q 018172 164 YYWPQYT------PITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFI-ELG-SI---------------- 219 (360)
Q Consensus 164 y~~~~~~------~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~-~~~-~~---------------- 219 (360)
|+.+... .+.+....++++.|+||.++.| .++|+++++++++++...... .+. ..
T Consensus 284 ~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 362 (504)
T 2okj_A 284 WGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQ 362 (504)
T ss_dssp TGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSC
T ss_pred hhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCC
Confidence 9864321 1222235678899999988844 689999986555555422111 110 00
Q ss_pred ---cCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCC---CCCcccccccccCCCCC----
Q 018172 220 ---GVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPE---YPLEYCNFTGKFTNSHP---- 289 (360)
Q Consensus 220 ---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~---- 289 (360)
..+.+.+.++..++. ...+++..++..++++++.+.|++++++.+.. |....++|........+
T Consensus 363 ~~rr~~~l~~~a~l~~lg------~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~ 436 (504)
T 2okj_A 363 CGRHVDIFKFWLMWKAKG------TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDS 436 (504)
T ss_dssp SSCBCCHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCC
T ss_pred CCCCccHHHHHHHHHHhh------HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccc
Confidence 113455555544443 26688888899999999999999987777654 44343332100000000
Q ss_pred CcccccCCc-hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec---CChHHHHHHHHHHHHHHhc
Q 018172 290 GFAWLESKE-DEDCEKLLRAERIMARGGRRFGADAKYARVSML---SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 290 ~~~~~~~~~-~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~---~~~e~~~~~~~~l~~~~~~ 350 (360)
.-..-.... ...+.+.|.++|+.+..+..++...+++|+++. .+++++++++++|++++++
T Consensus 437 ~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 501 (504)
T 2okj_A 437 PQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQD 501 (504)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC
T ss_pred hhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 000000000 145667777888654433233322368999996 3899999999999998765
No 204
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.88 E-value=2.3e-22 Score=192.40 Aligned_cols=278 Identities=11% Similarity=-0.009 Sum_probs=172.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHh---hcCCCCCCCceEEEeCCCCCCcHHHHHH---------
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYA---LSSPGGPEPISVVSAAPYYSQYPAETDY--------- 106 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~---l~~~gd~~~~~vl~~~p~~~~~~~~~~~--------- 106 (360)
.++++++++++.... + ..++|++|+|+++++..++.. +.++ +. |++.+|+|+.+...+..
T Consensus 96 ~~~~~~la~~l~~~~-~--~~~~v~~~~gg~eA~~~al~~ar~~~~~-~~----vi~~~~~yhg~~~~~~~~~~~~~~~~ 167 (453)
T 2cy8_A 96 HPLEVRWAERIVAAF-P--SIRKLRFTGSGTETTLLALRVARAFTGR-RM----ILRFEGHYHGWHDFSASGYNSHFDGQ 167 (453)
T ss_dssp CHHHHHHHHHHHHHC-T--TCSEEEEESCHHHHHHHHHHHHHHHHCC-CE----EEEECC--------------------
T ss_pred CHHHHHHHHHHHhhC-C--CCCEEEEeCCHHHHHHHHHHHHHHhhCC-CE----EEEEcCCcCCCchhhHhhcCCccCCC
Confidence 677888887764332 1 245899999999999999888 6654 44 88888999866543221
Q ss_pred --hCCe------eeeecC-Ccccccc--C---CCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC
Q 018172 107 --LRSG------LYKWDG-DANTFDK--N---NGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP 167 (360)
Q Consensus 107 --~g~~------~~~~~~-~~~~~~~--~---~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~ 167 (360)
.|.+ +..++. |.+.++. + +++++|+++..+||||.+++ +.+.++|+++|+++|+||+|.+.
T Consensus 168 ~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~ 247 (453)
T 2cy8_A 168 PAPGVLPETTANTLLIRPDDIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF 247 (453)
T ss_dssp --------CGGGEEEECTTCHHHHHHHHHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred cCCCCCccccCceeecCCCCHHHHHHHHHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc
Confidence 1332 333332 3333322 1 35666665555578998754 46678899999999999999843
Q ss_pred CCCcC--CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHH-----HHhhccccCChHHHHHHHHHhcc-cCCC
Q 018172 168 QYTPI--TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTR-----FIELGSIGVSKESQLRAAKILGI-VSDD 239 (360)
Q Consensus 168 ~~~~~--~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~-~~~~ 239 (360)
..... ....+...-+.|+||.++ .|+|+||+++ ++++++.+.. .....+++.|++++.++.++++. + .
T Consensus 248 ~~g~~~~~~~~~~~~di~s~sK~l~-~G~~~G~v~~-~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~-~- 323 (453)
T 2cy8_A 248 RVGNHGMQALLDVQPDLTCLAKASA-GGLPGGILGG-REDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL-E- 323 (453)
T ss_dssp TTCTTHHHHHHTCCCSEEEEEGGGG-TTSSCEEEEE-CHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH-H-
T ss_pred ccCchhhhHHhCCCCcEEEEChhhh-CCcceEEEec-hHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh-h-
Confidence 11110 001111111348999999 6999999999 7888887754 12234667889999888888874 3 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhc----CCcccCCCCCcccccccccCCCCCCcccccCCc-----------------
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQS----GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----------------- 298 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 298 (360)
++..++++++++++.+.|+++ +..... ++.+.|+|+.+++
T Consensus 324 -----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--------------~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~ 384 (453)
T 2cy8_A 324 -----DDVCAKINDLGQFAREAMNHLFARKGLNWLA--------------YGRFSGFHLMPGLPPNTTDTGSITRAEVAR 384 (453)
T ss_dssp -----TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE--------------ECCTTEEEEEETSCTTCCCCHHHHTTCSCC
T ss_pred -----hhHHHHHHHHHHHHHHHHHHHHhhCCCcEEE--------------EEeeeEEEEEEecccccccccccccccccc
Confidence 234455666666666666554 321111 1334466776652
Q ss_pred -----hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhchhcc
Q 018172 299 -----DEDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGGSISN 354 (360)
Q Consensus 299 -----~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~~~ 354 (360)
...+.+.|.++||.+.|+ +.+|+++..+++++++++++|++++.+....
T Consensus 385 ~~~~~~~~l~~~l~~~Gv~v~~~-------~~~~l~~~~t~~~i~~~l~~l~~~l~~~~~~ 438 (453)
T 2cy8_A 385 PDVKMIAAMRMALILEGVDIGGR-------GSVFLSAQHEREHVEHLVTTFDRVLDRLADE 438 (453)
T ss_dssp CCHHHHHHHHHHHHHTTEECBTT-------TEEECCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHCCeEEeCC-------CCEEeeccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 145667777889999653 2478876669999999999999999775433
No 205
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.88 E-value=5.2e-22 Score=190.91 Aligned_cols=268 Identities=11% Similarity=-0.008 Sum_probs=178.6
Q ss_pred CcEEEcCChHHHHHHHHHhhcCC----CCCCCceEEEeCCCCCCcHHHHHHhCCee-------------eeec--C----
Q 018172 60 RHIVIGTGSTQLYQAALYALSSP----GGPEPISVVSAAPYYSQYPAETDYLRSGL-------------YKWD--G---- 116 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~~----gd~~~~~vl~~~p~~~~~~~~~~~~g~~~-------------~~~~--~---- 116 (360)
++|++++|+++++..+++.+.+. |++.+.+|++.+|+|..+...+...+... ..++ .
T Consensus 115 ~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 194 (476)
T 3i5t_A 115 NRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHA 194 (476)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGC
T ss_pred CEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCccccc
Confidence 48999999999999999988531 21111249999999998876665543321 1222 1
Q ss_pred -C----------cccccc------CCCeeEEEEcCCCCCCcccc-h----HHHHHHhhhcCcEEEEeecccCCCCC-cCC
Q 018172 117 -D----------ANTFDK------NNGAYIEVVNSPNNPDGTIR-E----AVLAKVNRSAEGKLIHDLAYYWPQYT-PIT 173 (360)
Q Consensus 117 -~----------~~~~~~------~~~~~~i~~~~p~NPtG~~~-~----~~~~~~~~~~~~~li~D~ay~~~~~~-~~~ 173 (360)
+ .+.++. .+++++|++..++|++|... + +.+.++|+++|+++|+||+|.+.... ...
T Consensus 195 ~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~ 274 (476)
T 3i5t_A 195 GNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWF 274 (476)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC
T ss_pred CCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCce
Confidence 1 112211 14567888888888899754 3 56778999999999999999853111 110
Q ss_pred --C-CCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHH-------HhhccccCChHHHHHHHHHhcccCCCchh
Q 018172 174 --G-AADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRF-------IELGSIGVSKESQLRAAKILGIVSDDYPN 242 (360)
Q Consensus 174 --~-~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (360)
. ..+...-+.++||.++ .| +|+|++++ ++++++.+... ....+++.|++++.++.++|+.+.+
T Consensus 275 ~~~~~~~v~pdi~t~sK~l~-~G~~plg~v~~-~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---- 348 (476)
T 3i5t_A 275 ASEKVFGVVPDIITFAKGVT-SGYVPLGGLAI-SEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER---- 348 (476)
T ss_dssp HHHHTTCCCCSEEEECGGGG-TTSSCCEEEEE-CHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH----
T ss_pred eeecccCCCcchhhhhhhhc-CCCcCeEEEEE-CHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh----
Confidence 1 1111111347889999 69 99999999 89999988753 2335778999999999998875432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc--------------hHHHHHHHHh
Q 018172 243 FFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE--------------DEDCEKLLRA 308 (360)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~l~~ 308 (360)
++..+.++++.+++.+.|+.+....... .+++.+.|+++.+.+ ...+.+.|.+
T Consensus 349 --~~~~~~~~~~~~~l~~~L~~l~~~~~v~-----------~v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 415 (476)
T 3i5t_A 349 --EGIVDQAREMADYFAAALASLRDLPGVA-----------ETRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFE 415 (476)
T ss_dssp --TTHHHHHHHHHHHHHHHHHTTTTSTTEE-----------EEEEETTEEEEEECCC-----CCHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhcCCCeE-----------EEEecCceeEEEEecCccccccccchhHHHHHHHHHHHH
Confidence 2455666667777777776542111100 112333455555432 2456677788
Q ss_pred hCeeeeCCCCCCCCCCeEEEE--ecCChHHHHHHHHHHHHHHhchh
Q 018172 309 ERIMARGGRRFGADAKYARVS--MLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 309 ~gI~~~pg~~f~~~~~~~R~s--~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
+||.++|. + +++||+ +..++|++++++++|++++.+..
T Consensus 416 ~Gv~v~~~---g---~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~ 455 (476)
T 3i5t_A 416 LGLIVRPL---G---DLCVISPPLIISRAQIDEMVAIMRQAITEVS 455 (476)
T ss_dssp TTEECEEE---T---TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEec---C---CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999983 2 699999 55599999999999999997643
No 206
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.88 E-value=1.4e-22 Score=194.54 Aligned_cols=285 Identities=14% Similarity=0.091 Sum_probs=177.0
Q ss_pred cccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCC-----C----CCCCceEEEeCCC
Q 018172 26 YLSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSP-----G----GPEPISVVSAAPY 96 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~-----g----d~~~~~vl~~~p~ 96 (360)
.|++..+. .+||++++++++. +++++|+|+++++..++..+.++ | |+ |+++.+.
T Consensus 69 ~y~~~~~~-----~~l~~~la~~~~~--------~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~----Ii~~~~h 131 (467)
T 2oqx_A 69 AYSGSRSY-----YALAESVKNIFGY--------QYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKM----VAFSNYF 131 (467)
T ss_dssp CSSSCHHH-----HHHHHHHHHHHCC--------SEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTC----EEEESSC
T ss_pred eeccCchh-----HHHHHHHHHHhCc--------CcEEEcCCcHHHHHHHHHHHhccccccCCCCccce----EEecccc
Confidence 46666665 8999999999974 47999999999999999999887 8 87 8887433
Q ss_pred CCCcHHHHHHhCCeeeee------cC----------Ccccccc--C----CCeeEEEEcCCCCCC-cccch----HHHHH
Q 018172 97 YSQYPAETDYLRSGLYKW------DG----------DANTFDK--N----NGAYIEVVNSPNNPD-GTIRE----AVLAK 149 (360)
Q Consensus 97 ~~~~~~~~~~~g~~~~~~------~~----------~~~~~~~--~----~~~~~i~~~~p~NPt-G~~~~----~~~~~ 149 (360)
|..+.......|..+... +. |.+.++. + +++++|++++||||| |.+++ +.+.+
T Consensus 132 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~ 211 (467)
T 2oqx_A 132 FDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYS 211 (467)
T ss_dssp CHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHH
T ss_pred cccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHH
Confidence 343444555556665432 11 1111211 1 378999999999998 88876 36778
Q ss_pred HhhhcCcEEEEeecccC------------CCCCcCCCC-----CCccEEEeccccccCCC-CceEEEEeecCH---HHHH
Q 018172 150 VNRSAEGKLIHDLAYYW------------PQYTPITGA-----ADHDIMLFTLSKCTGHA-GSRIGWALVKDT---EVAR 208 (360)
Q Consensus 150 ~~~~~~~~li~D~ay~~------------~~~~~~~~~-----~~~~i~~~S~sK~~~~~-G~r~G~~~~~~~---~~~~ 208 (360)
+|+++|+++|+|+++.. ....+.... ...++++.|+||.++++ | ||++++++ +.++
T Consensus 212 la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G---g~~~~~~~~~~~~~~ 288 (467)
T 2oqx_A 212 IAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMG---GLLCMKDDSFFDVYT 288 (467)
T ss_dssp HHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSC---EEEEECSGGGHHHHH
T ss_pred HHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCCCc---eEEEecChhHHHHHH
Confidence 89999999999954321 000111000 12345689999999877 4 88887334 3444
Q ss_pred HHHHHHhhc-c---cc-CChHHHHHHHHHhcccCCCchhHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccccc
Q 018172 209 KMTRFIELG-S---IG-VSKESQLRAAKILGIVSDDYPNFF-EYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTG 282 (360)
Q Consensus 209 ~l~~~~~~~-~---~~-~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 282 (360)
.+....... + .+ .+.....++...+. .++ ++..+...++++++.+.|+++ ++.+. +.+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~-------~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~----- 354 (467)
T 2oqx_A 289 ECRTLCVVQEGFPTYGGLEGGAMERLAVGLY-------DGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ-QAGGH----- 354 (467)
T ss_dssp HHHHHHHHTTSSCCCCCCCHHHHHHHHHHHH-------HTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE-EECSS-----
T ss_pred HHHHhhhccCCcccccchhhhHHHHHHHhhH-------hhhhHHHHHHHHHHHHHHHHHHHHC-CCeee-cCCce-----
Confidence 444332111 1 11 12222222222222 111 123344567788888999887 45444 44443
Q ss_pred ccCCCCCCcccccCC------c-----hHHHHHHH-HhhCeeeeCCCCC--CC----------CCCeEEEEec---CChH
Q 018172 283 KFTNSHPGFAWLESK------E-----DEDCEKLL-RAERIMARGGRRF--GA----------DAKYARVSML---SREE 335 (360)
Q Consensus 283 ~~~~~~~~~~~~~~~------~-----~~~~~~~l-~~~gI~~~pg~~f--~~----------~~~~~R~s~~---~~~e 335 (360)
++|++++ + ...+.+.| .++||.+.|+..| +. ..+++||++. .+++
T Consensus 355 --------~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e 426 (467)
T 2oqx_A 355 --------AAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQT 426 (467)
T ss_dssp --------CEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHH
T ss_pred --------EEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHH
Confidence 4455442 1 12235555 8999999995532 21 1379999997 6899
Q ss_pred HHHHHHHHHHHHHhchh
Q 018172 336 IFNIFLERLSAIQGGSI 352 (360)
Q Consensus 336 ~~~~~~~~l~~~~~~~~ 352 (360)
++++++++|++++.+..
T Consensus 427 ~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 427 HMDFIIEAFKHVKENAA 443 (467)
T ss_dssp HHHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHhhhh
Confidence 99999999999997654
No 207
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.88 E-value=1.6e-21 Score=188.13 Aligned_cols=294 Identities=12% Similarity=0.036 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHh-hcCCCCC------CCCcEEEcCChHHHHHHHHHhhcCC---------CCC------CCceEEEeCCC
Q 018172 39 PELAEAINNLHH-VVDNAVS------DGRHIVIGTGSTQLYQAALYALSSP---------GGP------EPISVVSAAPY 96 (360)
Q Consensus 39 ~~lr~~la~~~~-~~~~~~~------~~~~i~~t~G~t~~l~~~~~~l~~~---------gd~------~~~~vl~~~p~ 96 (360)
.++++++++++. ..|.+.. ...++++|+|+|+++..++.++.+. ||. ....|+++.++
T Consensus 112 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~ 191 (486)
T 1js3_A 112 TELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQA 191 (486)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTC
T ss_pred HHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCC
Confidence 778878776643 3343321 1236899999999998888776421 320 01237889999
Q ss_pred CCCcHHHHHHhCCeeeeecCCccc-ccc-------CCCe------eEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEe
Q 018172 97 YSQYPAETDYLRSGLYKWDGDANT-FDK-------NNGA------YIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHD 161 (360)
Q Consensus 97 ~~~~~~~~~~~g~~~~~~~~~~~~-~~~-------~~~~------~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D 161 (360)
|.++...++.+|++++.++.|.++ ++. ++++ .+|++++|+||||.+-+ +.+.++|+++|+++++|
T Consensus 192 h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD 271 (486)
T 1js3_A 192 HSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVD 271 (486)
T ss_dssp CHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEe
Confidence 999999999999999999876322 221 1233 48999999999999877 77888999999999999
Q ss_pred ecccCCCC-----CcC-CCCCCccEEEeccccccCCCCceEEEEeecCHHH-HHHHHH----HHhhc-------------
Q 018172 162 LAYYWPQY-----TPI-TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEV-ARKMTR----FIELG------------- 217 (360)
Q Consensus 162 ~ay~~~~~-----~~~-~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~-~~~l~~----~~~~~------------- 217 (360)
++|+...+ ... .+..+.+.++.|+||.++.| +++|+++++++.. .+.+.. .....
T Consensus 272 ~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p-~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 350 (486)
T 1js3_A 272 AAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVN-FDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQ 350 (486)
T ss_dssp CTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESCHHHHHGGGC------------CCSCCCGGGSS
T ss_pred hhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCC-cceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccC
Confidence 99985322 111 12234567788999988854 8999999976664 333311 10000
Q ss_pred ---cccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCCcccccccccCCCCCCccc
Q 018172 218 ---SIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPE-YPLEYCNFTGKFTNSHPGFAW 293 (360)
Q Consensus 218 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 293 (360)
+.....+.+.++...+. ...+++..+++.++++++.+.|++++++.+.. |... ++.
T Consensus 351 ~~~~rr~~~~~~~~al~~~g------~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~--------------~v~ 410 (486)
T 1js3_A 351 LPLGRRFRSLKMWFVFRMYG------VKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLG--------------LVC 410 (486)
T ss_dssp SCSCCCCTHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSS--------------EEE
T ss_pred CCCCCchhHHHHHHHHHHHh------HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCcee--------------EEE
Confidence 00122344444444332 26788888999999999999999987777653 3222 233
Q ss_pred ccCCc----hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC---ChHHHHHHHHHHHHHHhchhcc
Q 018172 294 LESKE----DEDCEKLLRAERIMARGGRRFGADAKYARVSMLS---REEIFNIFLERLSAIQGGSISN 354 (360)
Q Consensus 294 ~~~~~----~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~---~~e~~~~~~~~l~~~~~~~~~~ 354 (360)
+.++. ...+.+.|.++|+.+.++..++ ..+++|+++.. +++++++++++|++++++..+.
T Consensus 411 f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~~~~~ 477 (486)
T 1js3_A 411 FRLKGSDGLNEALLERINSARKIHLVPCRLR-GQFVLRFAICSRKVESGHVRLAWEHIRGLAAELLAA 477 (486)
T ss_dssp EEESSCHHHHHHHHHHHHHHTSCBCEEEEET-TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEecChHHHHHHHHHHHHhcCCEEEEEEEEC-CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 33332 2567777777886654433344 35699999843 7899999999999998765433
No 208
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.88 E-value=3e-22 Score=190.42 Aligned_cols=274 Identities=15% Similarity=0.047 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHh---hcCCCCCCCceEEEeCCCCCCcHHHHH----------
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYA---LSSPGGPEPISVVSAAPYYSQYPAETD---------- 105 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~---l~~~gd~~~~~vl~~~p~~~~~~~~~~---------- 105 (360)
.++++.++++++ ..++|++|+|+++++..++.. +.+ ++. |++.+|+|..+...+.
T Consensus 99 ~~l~~~la~~~~-------~~~~v~~~~sgseA~~~al~~ar~~~~-~~~----vi~~~~~yhg~~~~~~~~~~~~~~~~ 166 (434)
T 2epj_A 99 VLLAEKILGYVK-------RGGMIRFVNSGTEATMTAIRLARGYTG-RDL----ILKFDGCYHGSHDAVLVAAGSAAAHY 166 (434)
T ss_dssp HHHHHHHHHHHC-------TTCEEEEESSHHHHHHHHHHHHHHHHC-CCE----EEEEETCCCCSSGGGSEECC------
T ss_pred HHHHHHHHHhCC-------CCCEEEEeCCHHHHHHHHHHHHHHhhC-CCe----EEEEcCCcCCCCHHHHHhcCCCcccc
Confidence 555566665552 235899999999999999887 444 454 8888899987654321
Q ss_pred ----HhCC------eeeeecC-Ccccccc--C---CCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecc
Q 018172 106 ----YLRS------GLYKWDG-DANTFDK--N---NGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAY 164 (360)
Q Consensus 106 ----~~g~------~~~~~~~-~~~~~~~--~---~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay 164 (360)
..|+ ++..++. |.+.++. + +++++|+++..+||||.+++ +.+.++|+++|+++|+||+|
T Consensus 167 ~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~ 246 (434)
T 2epj_A 167 GVPTSAGVPEAVARLTLVTPYNDVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVV 246 (434)
T ss_dssp CEESSTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETT
T ss_pred CCCCCCCCCCcccCceEecCCCCHHHHHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcch
Confidence 1232 2444442 3333322 1 35666666655678998764 46778899999999999999
Q ss_pred cCCCCCcCC--CCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHH---hhccccCChHHHHHHHHHhcccCCC
Q 018172 165 YWPQYTPIT--GAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFI---ELGSIGVSKESQLRAAKILGIVSDD 239 (360)
Q Consensus 165 ~~~~~~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (360)
.+....... ...+...-+.||||.++ .|+|+||+++ ++++++.+.... ...+++.|++.+.++.++++.+.+
T Consensus 247 ~g~~~g~~~~~~~~~~~~di~s~sK~l~-~G~~~G~v~~-~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~- 323 (434)
T 2epj_A 247 TGFRLGLEGAQGYFNIEGDIIVLGKIIG-GGFPVGAVAG-SREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE- 323 (434)
T ss_dssp TTTTSSTTHHHHHHTCCCSEEEEEGGGG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH-
T ss_pred hceeCCcchhhHHhCCCCCeeeecchhc-CCcceeeeee-cHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh-
Confidence 843211100 11111122459999999 5999999999 788888776521 224567888999888888874421
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhc----CCcccCCCCCcccccccccCCCCCCcccccCCc----------------h
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQS----GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----------------D 299 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~ 299 (360)
++..++++++++++.+.|+++ +..... ++.++|+|+.+++ .
T Consensus 324 -----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--------------~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~ 384 (434)
T 2epj_A 324 -----EPVYSVSREAAKALEEAASEVLDRTGLPYTI--------------NRVESMMQLFIGVEEVSNAAQARKADKKFY 384 (434)
T ss_dssp -----SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEE--------------EEETTEEEEEETCSCCSSHHHHTTSCHHHH
T ss_pred -----cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEE--------------EEeeeEEEEEEeCCCcccchhccccCHHHH
Confidence 245566666777777777654 321111 1233466766643 1
Q ss_pred HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhch
Q 018172 300 EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 300 ~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~ 351 (360)
..+.+.|.++||.+.||. ...+|+++..+++++++++++|++++++.
T Consensus 385 ~~~~~~l~~~Gv~v~~~~-----~~~~~~~~~~t~e~i~~~l~~l~~~l~~~ 431 (434)
T 2epj_A 385 VKLHEEMLRRGVFIAPSN-----LEAVFTGLPHQGEALEIAVEGLRSSLKTV 431 (434)
T ss_dssp HHHHHHHHHTTEECCSST-----TSCEECCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCeEEeccC-----CCcEEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 556777788999999974 23578887669999999999999988653
No 209
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.88 E-value=2.8e-22 Score=191.50 Aligned_cols=270 Identities=13% Similarity=0.025 Sum_probs=182.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc---C----------C-CCCCCceEEEeCCCCCCcHHHH
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS---S----------P-GGPEPISVVSAAPYYSQYPAET 104 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~---~----------~-gd~~~~~vl~~~p~~~~~~~~~ 104 (360)
.++++.++++++. ...++|++|+|+++++..++..+. + + |+. |++.+|.|..+...+
T Consensus 104 ~~la~~la~~~~~-----~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~----Vi~~~~~yhg~~~~~ 174 (449)
T 2cjg_A 104 ARFVETFARVLGD-----PALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQ----VLHLRGAFHGRSGYT 174 (449)
T ss_dssp HHHHHHHHHHHCC-----TTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCE----EEEETTCCCCSSTTG
T ss_pred HHHHHHHHHhcCC-----CCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCE----EEEECCCcCCcccch
Confidence 6788888887751 134589999999999999987653 2 2 666 999999999875543
Q ss_pred HHh-C--------C-----eeeeecCCc---cc-------------ccc-----CCCeeEEEEcCCCCCCcc-cch----
Q 018172 105 DYL-R--------S-----GLYKWDGDA---NT-------------FDK-----NNGAYIEVVNSPNNPDGT-IRE---- 144 (360)
Q Consensus 105 ~~~-g--------~-----~~~~~~~~~---~~-------------~~~-----~~~~~~i~~~~p~NPtG~-~~~---- 144 (360)
... | . ++..++.+. +. ++. ++++++|+++.++||||. ..+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l 254 (449)
T 2cjg_A 175 LSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFF 254 (449)
T ss_dssp GGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHH
T ss_pred hhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHH
Confidence 222 2 1 344454332 21 322 256788777766789995 554
Q ss_pred HHHHHHhhhcCcEEEEeecccCCCCCc-C-C-C--CCCccEEEeccccccCCCCceEEEEeecCHHHHHHHH-----HHH
Q 018172 145 AVLAKVNRSAEGKLIHDLAYYWPQYTP-I-T-G--AADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMT-----RFI 214 (360)
Q Consensus 145 ~~~~~~~~~~~~~li~D~ay~~~~~~~-~-~-~--~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~-----~~~ 214 (360)
+.+.++|+++|+++|+||+|.+..... . . . ....+ +.||||.+ |+||+++ ++++++.+. ...
T Consensus 255 ~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~d--i~t~sK~l-----~iG~~~~-~~~~~~~l~~~~~~~~~ 326 (449)
T 2cjg_A 255 AAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPD--IVAFGKKT-----QVCGVMA-GRRVDEVADNVFAVPSR 326 (449)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCS--EEEECGGG-----SSEEEEE-CGGGGGSTTCTTTSTTS
T ss_pred HHHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCce--EEEecCcc-----cEEEEEE-CHHHhhhhhhcccCCcc
Confidence 456788999999999999998432111 1 0 1 11122 34789987 6899998 678777532 222
Q ss_pred hhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhc----CC-cccCCCCCcccccccccCCCCC
Q 018172 215 ELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQS----GV-FGLPEYPLEYCNFTGKFTNSHP 289 (360)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~-~~~~~~~~~~~~~~~~~~~~~~ 289 (360)
...+++.|+++|.++.++++.+.+ ++..++++++++++.+.|+++ +. +... .+.+
T Consensus 327 ~~~t~~~n~~~~~aa~aal~~~~~------~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~--------------~~~g 386 (449)
T 2cjg_A 327 LNSTWGGNLTDMVRARRILEVIEA------EGLFERAVQHGKYLRARLDELAADFPAVVLDP--------------RGRG 386 (449)
T ss_dssp SCCSSSSCHHHHHHHHHHHHHHHH------HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEE--------------EEET
T ss_pred cccCCCCCHHHHHHHHHHHHHHHh------ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE--------------eecc
Confidence 335677899999999888874321 345667777888888888764 22 2111 1334
Q ss_pred CcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEe--cCChHHHHHHHHHHHHHHhc
Q 018172 290 GFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARVSM--LSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 290 ~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~ 350 (360)
+|+++++++. ..+.+.|.++||.+.|+. .+++|+++ ..++|++++++++|++++.+
T Consensus 387 ~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 447 (449)
T 2cjg_A 387 LMCAFSLPTTADRDELIRQLWQRAVIVLPAG-----ADTVRFRPPLTVSTAEIDAAIAAVRSALPV 447 (449)
T ss_dssp TEEEEECSSHHHHHHHHHHHHHTTEECEEET-----TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECChHHHHHHHHHHHHCCeEEecCC-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 4677787652 556666778999999862 57999965 44999999999999998864
No 210
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.87 E-value=7.2e-22 Score=187.26 Aligned_cols=257 Identities=14% Similarity=0.013 Sum_probs=169.0
Q ss_pred CCcEEEcCChHHHHHHHHHh---hcCCCCCCCceEEEeCCCCCCcHHHHHH--------------hCC------eeeeec
Q 018172 59 GRHIVIGTGSTQLYQAALYA---LSSPGGPEPISVVSAAPYYSQYPAETDY--------------LRS------GLYKWD 115 (360)
Q Consensus 59 ~~~i~~t~G~t~~l~~~~~~---l~~~gd~~~~~vl~~~p~~~~~~~~~~~--------------~g~------~~~~~~ 115 (360)
.++|++|+|+++++..++.. +.+ ++. |++.+|+|+.+...+.. .|. ++..++
T Consensus 108 ~~~v~~~~~g~ea~~~al~~ar~~~~-~~~----vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~ 182 (424)
T 2e7u_A 108 VDLVRFVNSGTEATMSALRLARGYTG-RPY----IVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLE 182 (424)
T ss_dssp CCEEEEESSHHHHHHHHHHHHHHHHC-CCE----EEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEEC
T ss_pred CCEEEEeCCHHHHHHHHHHHHHHhhC-CCE----EEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCC
Confidence 35899999999999999886 554 454 89999999886543321 132 234444
Q ss_pred C-Ccccccc--C---CCeeEEEEcCCCCC-Ccccch-----HHHHHHhhhcCcEEEEeecccCCCCCcC--CCCCCccEE
Q 018172 116 G-DANTFDK--N---NGAYIEVVNSPNNP-DGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTPI--TGAADHDIM 181 (360)
Q Consensus 116 ~-~~~~~~~--~---~~~~~i~~~~p~NP-tG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~~--~~~~~~~i~ 181 (360)
. |.+.++. + ++++ +++.+|+|+ ||.+++ +.+.++ +++|+++|+||+|.+...... ....+...-
T Consensus 183 ~~d~~~le~~l~~~~~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~d 260 (424)
T 2e7u_A 183 YNDPEGLREVLKRRGEEIA-AIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLAFGGATELLGLKPD 260 (424)
T ss_dssp TTCHHHHHHHHHHHGGGEE-EEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSSTTHHHHHHTCCCS
T ss_pred CCCHHHHHHHHHhCCCCEE-EEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccchhHHHHHhCCCcc
Confidence 2 3333322 1 3444 445566654 997754 356678 889999999999984321110 001111111
Q ss_pred EeccccccCCCCceEEEEeecCHHHHHHHHHHH---hhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 018172 182 LFTLSKCTGHAGSRIGWALVKDTEVARKMTRFI---ELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNML 258 (360)
Q Consensus 182 ~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 258 (360)
+.||||.++ .|+|+||+++ ++++++.+.... ...+++.|++++.++.++++.+.+ .++..++++++++++
T Consensus 261 i~s~sK~l~-~G~~~G~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-----~~~~~~~~~~~~~~l 333 (424)
T 2e7u_A 261 LVTLGKILG-GGLPAAAYAG-RREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE-----NPGYYAYLEDLGARL 333 (424)
T ss_dssp EEEECGGGG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH-----CTHHHHHHHHHHHHH
T ss_pred hhhhhhhhh-CCcceEEEEE-cHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHH
Confidence 349999999 6999999999 788888776521 224567889999888888874321 145667777777777
Q ss_pred HHHHHhc----CCcccCCCCCcccccccccCCCCCCcccccCCc-------------h---HHHHHHHHhhCeeeeCCCC
Q 018172 259 RQVIRQS----GVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-------------D---EDCEKLLRAERIMARGGRR 318 (360)
Q Consensus 259 ~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~---~~~~~~l~~~gI~~~pg~~ 318 (360)
.+.|+++ +..... ++.++|+|+.+++ . ..+.+.|.++||.++||.
T Consensus 334 ~~~L~~~~~~~~~~~~~--------------~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~- 398 (424)
T 2e7u_A 334 EAGLKEVLKEKGLPHTV--------------NRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSN- 398 (424)
T ss_dssp HHHHHHHHHHTTCCCEE--------------EEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSS-
T ss_pred HHHHHHHHHhCCCceEE--------------EeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccC-
Confidence 7777664 321111 1334467777653 1 456677778999999974
Q ss_pred CCCCCCeEEEEecCChHHHHHHHHHHHHHH
Q 018172 319 FGADAKYARVSMLSREEIFNIFLERLSAIQ 348 (360)
Q Consensus 319 f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~ 348 (360)
...+|+++..+++++++++++|++++
T Consensus 399 ----~~~~~~~~~~t~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 399 ----FEAAFLSVAHREEDVEKTLEALRKAL 424 (424)
T ss_dssp ----SSCEECCTTCCHHHHHHHHHHHHHHC
T ss_pred ----CCceEeeccCCHHHHHHHHHHHHHhC
Confidence 23578887669999999999998764
No 211
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.87 E-value=3.1e-21 Score=186.65 Aligned_cols=285 Identities=13% Similarity=0.119 Sum_probs=189.4
Q ss_pred HHHHHH----HHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh----c---------CCCCCC--Cc-eEEEeCCCCC
Q 018172 39 PELAEA----INNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL----S---------SPGGPE--PI-SVVSAAPYYS 98 (360)
Q Consensus 39 ~~lr~~----la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l----~---------~~gd~~--~~-~vl~~~p~~~ 98 (360)
.++++. +++++|. .+.+++++|+|+|+++..++..+ + .+|..+ +. .|+++.++|.
T Consensus 139 ~~le~~~~~~la~~~g~-----~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~ 213 (497)
T 2qma_A 139 TYVEQKVVNWLCDKYDL-----SEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHF 213 (497)
T ss_dssp HHHHHHHHHHHHHHTTC-----CTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCT
T ss_pred HHHHHHHHHHHHHHhCC-----CCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchH
Confidence 555555 5555553 12258999999999999988874 2 122100 11 3999999999
Q ss_pred CcHHHHHHhCC---eeeeecCCcc------cccc--CC----C--eeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEE
Q 018172 99 QYPAETDYLRS---GLYKWDGDAN------TFDK--NN----G--AYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIH 160 (360)
Q Consensus 99 ~~~~~~~~~g~---~~~~~~~~~~------~~~~--~~----~--~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~ 160 (360)
++...+..+|. +++.++.+.+ .++. ++ + +.+|++++++||||.+.+ +.+.++|+++|+++++
T Consensus 214 s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~v 293 (497)
T 2qma_A 214 TVQKSASWMGLGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHV 293 (497)
T ss_dssp HHHHHHHHTTSCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHcCCCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEE
Confidence 99999998876 7888887532 2211 11 2 348889999999999877 7888899999999999
Q ss_pred eecccCCCCCc-----CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhcccc----C----------
Q 018172 161 DLAYYWPQYTP-----ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIG----V---------- 221 (360)
Q Consensus 161 D~ay~~~~~~~-----~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~----~---------- 221 (360)
|++|+.+.... +.+....++++.|+||.++.| .++|+++++++..++.+.....+.... .
T Consensus 294 D~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 372 (497)
T 2qma_A 294 DGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQT-ISCGALLVNDKSNFKFLLHHADYLNREHDELPNLVDKSIATT 372 (497)
T ss_dssp EETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCC-SSCEEEEESCGGGGGGGCC--------------------CCS
T ss_pred ehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCC-cceEEEEEeCHHHHHHhcCCchhcCCccccCCCccccCCCCC
Confidence 99998643221 112225578899999988745 699999986665444332110000000 0
Q ss_pred ---ChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCCcccccccccCCCCCCcccccCC
Q 018172 222 ---SKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPE-YPLEYCNFTGKFTNSHPGFAWLESK 297 (360)
Q Consensus 222 ---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (360)
..+.+.+ +++.+ . ...+++..+++.++++++.+.|++++++.+.. +... ++++++.
T Consensus 373 r~~~al~~~~---~l~~l-g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~--------------~v~f~~~ 432 (497)
T 2qma_A 373 KRFDALKVFM---TMQNV-G--PKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLS--------------TVLFRAT 432 (497)
T ss_dssp CCCTHHHHHH---HHHHT-C--HHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSS--------------EEEEEEC
T ss_pred CchhHHHHHH---HHHHh-C--HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCce--------------EEEEEEc
Confidence 1122222 23322 1 26788888999999999999999987766543 3222 3444432
Q ss_pred c--------hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEe-c--CChHHHHHHHHHHHHHHhc
Q 018172 298 E--------DEDCEKLLRAERIMARGGRRFGADAKYARVSM-L--SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 298 ~--------~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~-~--~~~e~~~~~~~~l~~~~~~ 350 (360)
. ...+.+.|.++|+.+.++..+. +.+++|+++ . .+++++++++++|++++.+
T Consensus 433 ~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~-g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 433 HETADLDELNKALRLEALTRGIAVLGETIVD-GKTALKFTILNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp CSSSCHHHHHHHHHHHHHHHTSCBCEEEEET-TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHhCCCEEEEeeEEC-CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 2 1346677888899987755454 256899998 3 3899999999999998764
No 212
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.87 E-value=4e-20 Score=173.72 Aligned_cols=210 Identities=13% Similarity=0.042 Sum_probs=157.1
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEE--cCChHHHHHHHHHhhcCCCCCCCceEEEeC-CCCCCcHH----------HH
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVI--GTGSTQLYQAALYALSSPGGPEPISVVSAA-PYYSQYPA----------ET 104 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~--t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~-p~~~~~~~----------~~ 104 (360)
..+|++.++++++. ++.+++ ++|+++++..++.+++++||+ |+++. |.|..+.. .+
T Consensus 61 ~~~Le~~lA~l~g~-------e~alv~p~~~sGt~Ai~~al~all~~GD~----Vl~~~~~~y~~~~~~~~~~g~~~~~l 129 (409)
T 3jzl_A 61 RDTLERVYATVFKT-------EAALVRPQIISGTHAISTVLFGILRPDDE----LLYITGQPYDTLEEIVGIRKQGQGSL 129 (409)
T ss_dssp HHHHHHHHHHHHTC-------SEEEEETTSCSHHHHHHHHHHHHCCTTCE----EEECSSSCCTTHHHHHTSSSSSSSCT
T ss_pred HHHHHHHHHHHhCC-------CcEEEECCCccHHHHHHHHHHHhcCCCCE----EEEeCCCCcHhHHHHHhcccchhhHH
Confidence 48999999999994 334443 888999999999999999998 99998 99999885 44
Q ss_pred HHhCCeeeeecCCccc------ccc--CCCeeEEEEcC----CCCCCcccch-HHHHHHhhh--cCcEEEEeecccCCCC
Q 018172 105 DYLRSGLYKWDGDANT------FDK--NNGAYIEVVNS----PNNPDGTIRE-AVLAKVNRS--AEGKLIHDLAYYWPQY 169 (360)
Q Consensus 105 ~~~g~~~~~~~~~~~~------~~~--~~~~~~i~~~~----p~NPtG~~~~-~~~~~~~~~--~~~~li~D~ay~~~~~ 169 (360)
+..|++++.++.+.++ +.. ++++++|++++ |+||||.+.+ +.+.++|++ +|+++++|++|..+..
T Consensus 130 ~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~ 209 (409)
T 3jzl_A 130 KDFHIGYSSVPLLENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVE 209 (409)
T ss_dssp GGGTCEEEECCCCTTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTS
T ss_pred HHcCCEEEEeCCCCCCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcccccc
Confidence 6679999998875332 221 46899999999 9999999988 678889998 9999999999986542
Q ss_pred CcCCCCCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHHHhhcc----ccCChHHHHHHHHHhcccCCCchhHH
Q 018172 170 TPITGAADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRFIELGS----IGVSKESQLRAAKILGIVSDDYPNFF 244 (360)
Q Consensus 170 ~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~ 244 (360)
...+...+.+++++|+||.++.+| .+.||+++ ++++++.+........ .+.....+.++...+ ..+
T Consensus 210 ~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~-~~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl--------~~~ 280 (409)
T 3jzl_A 210 YQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAG-KEALVDLCGYRLTTPGIGREAGASLYSLLEMYQGF--------FLA 280 (409)
T ss_dssp SCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEE-CHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH--------HHH
T ss_pred cCCccccCCeEEEECccccCCccCCceEEEEEe-CHHHHHHHHHHhccccccccccccHHHHHHHHHHH--------hhH
Confidence 222334567899999999998555 34689988 8999999987543211 122111122332222 334
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Q 018172 245 EYGRRLMSERWNMLRQVIRQSGV 267 (360)
Q Consensus 245 ~~~~~~~~~~~~~l~~~l~~~~~ 267 (360)
...+++..++..++.+.|++++.
T Consensus 281 ~~r~~~~~~~a~~la~~L~~~g~ 303 (409)
T 3jzl_A 281 PHVTAQAIKGARFTAAMLAEFGV 303 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC
Confidence 56667778888999999999864
No 213
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.87 E-value=1.1e-20 Score=178.09 Aligned_cols=211 Identities=12% Similarity=0.043 Sum_probs=157.8
Q ss_pred ccHHHHHHHHHHHhhcCCCCCCCCcEEE--cCChHHHHHHHHHhhcCCCCCCCceEEEeC-CCCCCcHH-----------
Q 018172 37 LVPELAEAINNLHHVVDNAVSDGRHIVI--GTGSTQLYQAALYALSSPGGPEPISVVSAA-PYYSQYPA----------- 102 (360)
Q Consensus 37 ~~~~lr~~la~~~~~~~~~~~~~~~i~~--t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~-p~~~~~~~----------- 102 (360)
+..+|++.++++++. ++.++. ++|+++++..++.+++++||+ |++++ |.|..+..
T Consensus 74 ~~~~Le~~lA~l~g~-------e~alv~p~~~sGt~Ai~~al~all~pGD~----Vl~~~~~~y~~~~~~~g~~~~~~~~ 142 (427)
T 3i16_A 74 GRDSLDAVYARVFNT-------ESALVRPHFVNGTHALGAALFGNLRPGNT----MLSVCGEPYDTLHDVIGITENSNMG 142 (427)
T ss_dssp HHHHHHHHHHHHHTC-------SEEEEETTCCSHHHHHHHHHHHHCCTTCE----EEESSSSCCGGGHHHHTCSCCCSSC
T ss_pred HHHHHHHHHHHHhCC-------cceEEeCCCccHHHHHHHHHHHHhCCCCE----EEEeCCCccHHHHHHHhccccchHH
Confidence 359999999999995 334443 788899999999999999998 99998 99998874
Q ss_pred HHHHhCCeeeeecCCccc------ccc--C--CCeeEEEEcC----CCCCCcccch-HHHHHHhhh--cCcEEEEeeccc
Q 018172 103 ETDYLRSGLYKWDGDANT------FDK--N--NGAYIEVVNS----PNNPDGTIRE-AVLAKVNRS--AEGKLIHDLAYY 165 (360)
Q Consensus 103 ~~~~~g~~~~~~~~~~~~------~~~--~--~~~~~i~~~~----p~NPtG~~~~-~~~~~~~~~--~~~~li~D~ay~ 165 (360)
.++..|++++.++.+.++ +.. + +++++|++++ |+||||.+.+ +.+.++|++ +|+++++|++|.
T Consensus 143 ~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~ 222 (427)
T 3i16_A 143 SLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYG 222 (427)
T ss_dssp CTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTT
T ss_pred HHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCc
Confidence 445679999998875332 221 3 6899999999 9999999988 778889998 999999999998
Q ss_pred CCCCCcCCCCCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHHHhhcccc--CCh-HH-HHHHHHHhcccCCCc
Q 018172 166 WPQYTPITGAADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRFIELGSIG--VSK-ES-QLRAAKILGIVSDDY 240 (360)
Q Consensus 166 ~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~--~~~-~~-~~~~~~~l~~~~~~~ 240 (360)
.+.+...+...+.+++++|+||.++.+| .+.||+++ ++++++.+.........+ ..+ .. ...+...+
T Consensus 223 ~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~-~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl------- 294 (427)
T 3i16_A 223 EFMDTKEPTDVGADLIAGSLIKNIGGGIAPTGGYLAG-TKDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGL------- 294 (427)
T ss_dssp TTSSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEE-CHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-------
T ss_pred cccccCCccccCCeEEEecCcccCCCCCCceEEEEEE-CHHHHHHHHHhcccCccCccCCccHHHHHHHHHHH-------
Confidence 6542222234567899999999998555 56799998 899999998754322222 111 21 22222222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGV 267 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~ 267 (360)
..+....++..++..++.+.|++++.
T Consensus 295 -~~~~~r~~~~~~~a~~la~~L~~~g~ 320 (427)
T 3i16_A 295 -FLAPHISMEALKGAILCSRIMELAGF 320 (427)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 34456777888888999999999964
No 214
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.86 E-value=4.8e-20 Score=172.68 Aligned_cols=277 Identities=12% Similarity=-0.038 Sum_probs=185.7
Q ss_pred ccCCCCccccccHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhh-------cCCCCCCCceEEEeCCCCCC
Q 018172 27 LSDMGNVCWFLVPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYAL-------SSPGGPEPISVVSAAPYYSQ 99 (360)
Q Consensus 27 y~~~~g~~~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l-------~~~gd~~~~~vl~~~p~~~~ 99 (360)
|.+..+. .++|++++++++. + ++++++++++++..++..+ .++||+ |+++.|+|..
T Consensus 30 ~~~~~~~-----~~l~~~la~~~~~-------~-~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~----Vi~~~~~~~~ 92 (390)
T 3b8x_A 30 FTMGEYV-----KQYETQFAKTFGS-------K-YAVMVSSGSTANLLMIAALFFTKKPRLKKGDE----IIVPAVSWST 92 (390)
T ss_dssp CSSCHHH-----HHHHHHHHHHHTC-------S-EEEEESCHHHHHHHHHHHTTSSSSCSCCTTCE----EEEESSSCHH
T ss_pred CCCChHH-----HHHHHHHHHHHCC-------C-cEEEECCHHHHHHHHHHHHHhhhhcCCCCcCE----EEECCCCcHH
Confidence 4444555 9999999999985 2 5677777789999999998 778887 9999999999
Q ss_pred cHHHHHHhCCeeeeecCCccc--ccc-------CCCeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCC
Q 018172 100 YPAETDYLRSGLYKWDGDANT--FDK-------NNGAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQY 169 (360)
Q Consensus 100 ~~~~~~~~g~~~~~~~~~~~~--~~~-------~~~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~ 169 (360)
+...+...|++++.++.+.+. ++. ++++++|++++ ++|...+ +.+.++|+++|+++|+|++|+.+..
T Consensus 93 ~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~ 169 (390)
T 3b8x_A 93 TYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTDSTKAILTVN---LLGNPNNFDEINKIIGGRDIILLEDNCESMGAT 169 (390)
T ss_dssp HHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCE
T ss_pred HHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCcCCeEEEEEC---CccChhhHHHHHHHHHHcCCEEEEECcCcccCE
Confidence 999999999999999877542 211 35789998874 5666555 6788888889999999999985432
Q ss_pred CcCCCCCCc--cEEEecc--ccccCCCCceEEEEeecCHHHHHHHHHHHhhcc---------------------------
Q 018172 170 TPITGAADH--DIMLFTL--SKCTGHAGSRIGWALVKDTEVARKMTRFIELGS--------------------------- 218 (360)
Q Consensus 170 ~~~~~~~~~--~i~~~S~--sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~--------------------------- 218 (360)
... ...+. ++...|+ +|.++ +| +.|+++++++++.+.+........
T Consensus 170 ~~~-~~~g~~~~~~~~s~~~~k~~~-~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (390)
T 3b8x_A 170 FNN-KCAGTFGLMGTFSSFYSNHIA-TM-EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVL 246 (390)
T ss_dssp ETT-EETTSSSSEEEEECCTTSSSC-SS-SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCS
T ss_pred ECC-cccccccceEEEEccCCCCCc-cC-CceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceec
Confidence 211 12222 3333332 34443 33 349999855678777766542110
Q ss_pred cc----CChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccc
Q 018172 219 IG----VSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWL 294 (360)
Q Consensus 219 ~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (360)
.+ .+.+...++...+ +.+++..++.+++++++.+.|++++++.+..+.. . .....+++
T Consensus 247 ~g~~~~~~~~~aa~~l~~l--------~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~---------~~~~~~~i 308 (390)
T 3b8x_A 247 PGYNVRPLEMSGAIGIEQL--------KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETG-E---------SSWFGFSF 308 (390)
T ss_dssp CCCBCCCCHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCS-B---------CCCCEEEE
T ss_pred cccccCcCHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCC-C---------cccEEEEE
Confidence 11 3333333332222 5567888888999999999999887665543210 0 00111344
Q ss_pred cCC-----chHHHHHHHHhhCeeeeCC---CCCCC----C-----------------CCeEEEEecC--ChHHHHHHHHH
Q 018172 295 ESK-----EDEDCEKLLRAERIMARGG---RRFGA----D-----------------AKYARVSMLS--REEIFNIFLER 343 (360)
Q Consensus 295 ~~~-----~~~~~~~~l~~~gI~~~pg---~~f~~----~-----------------~~~~R~s~~~--~~e~~~~~~~~ 343 (360)
.++ +.+.+.+.|.++||.+++. ..+.. . .+.+||++.. ++||+++++++
T Consensus 309 ~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~ 388 (390)
T 3b8x_A 309 IIKKDSGVIRKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREV 388 (390)
T ss_dssp EECTTSCCCHHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHH
T ss_pred EecCcCcccHHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHh
Confidence 444 2377888888999999873 21100 0 1259999866 89999999887
Q ss_pred H
Q 018172 344 L 344 (360)
Q Consensus 344 l 344 (360)
|
T Consensus 389 l 389 (390)
T 3b8x_A 389 L 389 (390)
T ss_dssp T
T ss_pred h
Confidence 6
No 215
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.86 E-value=3.5e-20 Score=185.13 Aligned_cols=292 Identities=12% Similarity=0.007 Sum_probs=195.0
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHH-HHHhCCeeeeecC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAE-TDYLRSGLYKWDG 116 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~-~~~~g~~~~~~~~ 116 (360)
..++++.+|+++|. ++.+++++|+++++..++.+++++||. |+++.|+|.++... +...|++++.++.
T Consensus 175 i~e~e~~lA~~~ga-------e~~i~v~nGtt~an~~ai~al~~pGD~----VLv~~~~H~S~~~~~~~l~Ga~~v~v~~ 243 (730)
T 1c4k_A 175 AVAAEKHAARVYNA-------DKTYFVLGGSSNANNTVTSALVSNGDL----VLFDRNNHKSVYNSALAMAGGRPVYLQT 243 (730)
T ss_dssp HHHHHHHHHHHTTC-------SEEEEESSHHHHHHHHHHHHHCCTTCE----EEEETTCCHHHHHHHTTTTCCEEEEECE
T ss_pred HHHHHHHHHHHHCC-------CcEEEECCHHHHHHHHHHHHhcCCCCE----EEEcCCchHHHHHHHHHHCCCEEEEEeC
Confidence 59999999999995 456889999999999999999999998 99999999999888 8888999887653
Q ss_pred -----------Ccccc-----cc--CCC------e----eEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCC
Q 018172 117 -----------DANTF-----DK--NNG------A----YIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWP 167 (360)
Q Consensus 117 -----------~~~~~-----~~--~~~------~----~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~ 167 (360)
|.+.+ .. +++ + +++++++| ||+|.+.+ +.+.++|+++++++++|++|+..
T Consensus 244 ~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~ 322 (730)
T 1c4k_A 244 NRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGY 322 (730)
T ss_dssp EECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCG
T ss_pred CccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccc
Confidence 44444 22 222 4 89999999 58999988 77888899899999999999731
Q ss_pred -CCC-------cCCC-C----CCccEEEeccccccCCCCceE-EEEeecCHHH--------HHHHHHHH-hhccccCChH
Q 018172 168 -QYT-------PITG-A----ADHDIMLFTLSKCTGHAGSRI-GWALVKDTEV--------ARKMTRFI-ELGSIGVSKE 224 (360)
Q Consensus 168 -~~~-------~~~~-~----~~~~i~~~S~sK~~~~~G~r~-G~~~~~~~~~--------~~~l~~~~-~~~~~~~~~~ 224 (360)
.+. ++.. . ..++++++|+||.++ |.+. |+++.+++.+ ...+.... ...+.+++..
T Consensus 323 ~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~--g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~ 400 (730)
T 1c4k_A 323 EQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQA--GFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYP 400 (730)
T ss_dssp GGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSS--CCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHH
T ss_pred cccCcccCCcCcccccccCCCCCCEEEEECCCCCCC--CCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHH
Confidence 111 1211 1 224499999999865 5544 5564433321 12232222 1223345545
Q ss_pred HHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHh-cCCcccCCCCCc---------------ccccccc-----
Q 018172 225 SQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQ-SGVFGLPEYPLE---------------YCNFTGK----- 283 (360)
Q Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~---------------~~~~~~~----- 283 (360)
...++.++++.+.. ...++..+++.++.+.+.+.|++ ++++.+..+... ...++..
T Consensus 401 ~iaal~aA~~~l~~---~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (730)
T 1c4k_A 401 MYAALDVNAAMQEG---EAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAK 477 (730)
T ss_dssp HHHHHHHHHHHHSH---HHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCT
T ss_pred HHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccch
Confidence 44444444543321 24456667788888889999988 667766554320 0000000
Q ss_pred ----cCCCCC-Cc-----ccccCC--------------chHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecC--ChHHH
Q 018172 284 ----FTNSHP-GF-----AWLESK--------------EDEDCEKLLRAERIMARGGRRFGADAKYARVSMLS--REEIF 337 (360)
Q Consensus 284 ----~~~~~~-~~-----~~~~~~--------------~~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~--~~e~~ 337 (360)
.....+ ++ +.+.++ ....+.+.|+++||.+... +...+|++++. +++++
T Consensus 478 ~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~-----~~~~ir~~~s~g~t~e~i 552 (730)
T 1c4k_A 478 WHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKS-----DLNSILFLMTPAETPAKM 552 (730)
T ss_dssp TTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEE-----CSSEEEEECCTTCCHHHH
T ss_pred hccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEEC-----CCCeEEEEeCCCCCHHHH
Confidence 000001 01 334442 1277888898999988652 25678998866 88999
Q ss_pred HHHHHHHHHHHhch
Q 018172 338 NIFLERLSAIQGGS 351 (360)
Q Consensus 338 ~~~~~~l~~~~~~~ 351 (360)
++++++|.++.+..
T Consensus 553 ~~Ll~aL~~i~~~~ 566 (730)
T 1c4k_A 553 NNLITQLLQLQRLI 566 (730)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998654
No 216
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.86 E-value=1.8e-20 Score=176.77 Aligned_cols=211 Identities=15% Similarity=0.039 Sum_probs=156.5
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCCCcEEE---cCChHHHHHHHHHhhcCCCCCCCceEEEeC-CCCCCcH----------
Q 018172 36 FLVPELAEAINNLHHVVDNAVSDGRHIVI---GTGSTQLYQAALYALSSPGGPEPISVVSAA-PYYSQYP---------- 101 (360)
Q Consensus 36 ~~~~~lr~~la~~~~~~~~~~~~~~~i~~---t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~-p~~~~~~---------- 101 (360)
++..+|++.++++++. + ..++ ++|+++++..++.+++++||+ |++++ |.|..+.
T Consensus 74 ~g~~~Le~~lA~l~g~-------e-~alv~p~~~sGt~A~~~al~all~pGD~----Vl~~~~~~y~~~~~~~g~~~~~~ 141 (427)
T 3hvy_A 74 IGRDSLDRVYANIFNT-------E-SAFVRPHFVNGTHAIGAALFGNLRPNDT----MMSICGMPYDTLHDIIGMDDSKK 141 (427)
T ss_dssp HHHHHHHHHHHHHHTC-------S-EEEEETTCCSHHHHHHHHHHHTCCTTCE----EEECSSSCCGGGHHHHTCCTTCC
T ss_pred hhHHHHHHHHHHHhCC-------C-ceEEeCCCCcHHHHHHHHHHHhcCCCCE----EEEeCCCCchhHHHHhccccchh
Confidence 3359999999999994 3 3455 788899999999999999998 99998 9999887
Q ss_pred -HHHHHhCCeeeeecCC-----cccccc--C--CCeeEEEEcC----CCCCCcccch-HHHHHHhhh--cCcEEEEeecc
Q 018172 102 -AETDYLRSGLYKWDGD-----ANTFDK--N--NGAYIEVVNS----PNNPDGTIRE-AVLAKVNRS--AEGKLIHDLAY 164 (360)
Q Consensus 102 -~~~~~~g~~~~~~~~~-----~~~~~~--~--~~~~~i~~~~----p~NPtG~~~~-~~~~~~~~~--~~~~li~D~ay 164 (360)
..++..|++++.++.+ .+.+.. + +++|+|++++ |+||||.+.+ +.+.++|++ +|+++++|++|
T Consensus 142 ~~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~ 221 (427)
T 3hvy_A 142 VGSLREYGVKYKMVDLKDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCY 221 (427)
T ss_dssp SCCTGGGTCEEEECCCBTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred hhHHHHcCCEEEEecCCCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCc
Confidence 3456679999988862 222222 3 7899999999 9999999988 778889998 89999999999
Q ss_pred cCCCCCcCCCCCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHHHhhcccc--C-ChHH-HHHHHHHhcccCCC
Q 018172 165 YWPQYTPITGAADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRFIELGSIG--V-SKES-QLRAAKILGIVSDD 239 (360)
Q Consensus 165 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~--~-~~~~-~~~~~~~l~~~~~~ 239 (360)
..+.+...+...+.+++++|+||.++..| .+.||+++ ++++++.+.........+ . +.+. ...+...+
T Consensus 222 ~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~-~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl------ 294 (427)
T 3hvy_A 222 GEFVEEKEPTDVGADIIAGSLIKNIGGGIATTGGYIAG-KEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGL------ 294 (427)
T ss_dssp CTTTSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEE-CHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH------
T ss_pred cccccCCCCcccCCeEEEECCcccccccccceEEEEEE-CHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhH------
Confidence 86542222234567899999999998544 45689888 899999998754322222 1 1122 22332222
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018172 240 YPNFFEYGRRLMSERWNMLRQVIRQSGV 267 (360)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 267 (360)
.......++..++..++.+.|++++.
T Consensus 295 --~~~~~r~~~~~~~a~~la~~L~~~g~ 320 (427)
T 3hvy_A 295 --FMAPHVTIEAVKGAVFCARIMELAGF 320 (427)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 33445667788888899999999864
No 217
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.86 E-value=1.5e-20 Score=182.63 Aligned_cols=294 Identities=15% Similarity=0.097 Sum_probs=189.2
Q ss_pred HHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc-------C-CCCC--CCceEEEeCCCCCCcHHHHHHhCC
Q 018172 40 ELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS-------S-PGGP--EPISVVSAAPYYSQYPAETDYLRS 109 (360)
Q Consensus 40 ~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~-------~-~gd~--~~~~vl~~~p~~~~~~~~~~~~g~ 109 (360)
++++.+++++|. +.+++++|+|+|+++..++..+. + +|+. .+..|+++.++|.++...++.+|.
T Consensus 152 ~~~~~la~l~g~------~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~ 225 (515)
T 2jis_A 152 EVLRKLRALVGW------SSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGL 225 (515)
T ss_dssp HHHHHHHHHHTC------SSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTS
T ss_pred HHHHHHHHHhCC------CCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCC
Confidence 345556667764 34689999999999888877763 2 4641 011399999999999999999888
Q ss_pred ---eeeeecCCccc-ccc-------CC------CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCCCCc
Q 018172 110 ---GLYKWDGDANT-FDK-------NN------GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQYTP 171 (360)
Q Consensus 110 ---~~~~~~~~~~~-~~~-------~~------~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~~~~ 171 (360)
+++.++.+.++ ++. ++ ++++|++++|+||||.+.+ +.+.++|+++|+++++|++|+.+....
T Consensus 226 g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~ 305 (515)
T 2jis_A 226 GTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLS 305 (515)
T ss_dssp CGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGC
T ss_pred CCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhC
Confidence 88888876332 111 11 4899999999999999988 788889999999999999998643221
Q ss_pred ------CCCCCCccEEEeccccccCCCCceEEEEeecCH-HHHHHHH----HHH-hh----------ccc------cCCh
Q 018172 172 ------ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDT-EVARKMT----RFI-EL----------GSI------GVSK 223 (360)
Q Consensus 172 ------~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~-~~~~~l~----~~~-~~----------~~~------~~~~ 223 (360)
+.+..+.++++.|++|.++ .+.++|+++++++ ++++... ... .. .+. ....
T Consensus 306 ~~~~~~~~g~~~aD~v~~s~hK~l~-~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~a 384 (515)
T 2jis_A 306 QTHRHLLDGIQRADSVAWNPHKLLA-AGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDC 384 (515)
T ss_dssp TTTGGGGTTGGGCSEEEECTTSTTC-CCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCH
T ss_pred hhhHhhcCCCccCCEEEECcccccC-CCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccH
Confidence 2223366899999999887 3457999998555 4555421 111 00 000 0113
Q ss_pred HHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCC-CcccccccccCCCCCCcccc-cCCch--
Q 018172 224 ESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYP-LEYCNFTGKFTNSHPGFAWL-ESKED-- 299 (360)
Q Consensus 224 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~-- 299 (360)
+.+.++...+. ...+++..++..++++++.+.|++++++.+..+. ...++|... +. ..-.. +..+-
T Consensus 385 l~~~~~l~~lg------~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~--p~--~~~~~~~~~~~~~ 454 (515)
T 2jis_A 385 LKLWLMWKAQG------DQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFV--PP--SLRGKQESPDYHE 454 (515)
T ss_dssp HHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEEC--CG--GGTTCTTSTTHHH
T ss_pred HHHHHHHHHHh------HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEe--Cc--cccccccchhHHH
Confidence 33333433332 2667888899999999999999998777765432 222222100 00 00000 00010
Q ss_pred ------HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec---CChHHHHHHHHHHHHHHhc
Q 018172 300 ------EDCEKLLRAERIMARGGRRFGADAKYARVSML---SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 300 ------~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~---~~~e~~~~~~~~l~~~~~~ 350 (360)
..+.+.|.+.|+.+..........+++|++++ .+++++++++++|++++++
T Consensus 455 ~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 455 RLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp HHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 12556677788765321111112468999994 3899999999999988754
No 218
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.86 E-value=3.1e-20 Score=171.45 Aligned_cols=278 Identities=12% Similarity=0.049 Sum_probs=198.7
Q ss_pred cHHHHHHHHHHHhhcCCCCCC-CCcEEE-cCChHHHHHHHHHhhcCCCCCCCceEE-EeCCCCC-CcHHHHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSD-GRHIVI-GTGSTQLYQAALYALSSPGGPEPISVV-SAAPYYS-QYPAETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~-~~~i~~-t~G~t~~l~~~~~~l~~~gd~~~~~vl-~~~p~~~-~~~~~~~~~g~~~~~ 113 (360)
+++.|+.++++++. + +++|++ |+|+|+++++++..++ +||+ +. +..-.|. .....++..|+++..
T Consensus 52 ~~~~r~~la~ll~~------~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~----~~~i~~~~~~~~~~~~a~~~G~~v~~ 120 (361)
T 3m5u_A 52 HFGAQEKAKKLYEL------NDDYEVLFLQGGASLQFAMIPMNLA-LNGV----CEYANTGVWTKKAIKEAQILGVNVKT 120 (361)
T ss_dssp HHHHHHHHHHHHTC------CTTEEEEEESSHHHHHHHHHHHHHC-CSSC----EEEEECSHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHhCC------CCCceEEEEcCcHHHHHHHHHHhcC-CCCe----EEEEeCCHHHHHHHHHHHHcCCceEE
Confidence 47889999999986 3 457888 9999999999999998 7876 42 2222232 123445667999988
Q ss_pred ecCCccc-c--c----cCCCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEeccc
Q 018172 114 WDGDANT-F--D----KNNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLFTLS 186 (360)
Q Consensus 114 ~~~~~~~-~--~----~~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~S~s 186 (360)
++.+.++ + . .++++++|.+++..|.||...++ +++ +|+++++|.+++.++.+.... +.++++.|.+
T Consensus 121 ~~~~~~g~~~~~~~~~l~~~t~lv~~~~~e~~tG~~~~~----i~~-~~~~~~vD~~q~~g~~~id~~--~~d~~~~s~~ 193 (361)
T 3m5u_A 121 VASSEESNFDHIPRVEFSDNADYAYICSNNTIYGTQYQN----YPK-TKTPLIVDASSDFFSRKVDFS--NIALFYGGVQ 193 (361)
T ss_dssp EEECTTTTSCSCCCCCCCTTSSEEEEESEETTTTEECSS----CCC-CSSCEEEECGGGTTSSCCCCT--TEEEEEEETT
T ss_pred EecccCcCCCcCChhhcCCCCCEEEEeCCCCCcceeCCc----ccc-cCCEEEEEcccccCCCCCCcc--cCCEEEEech
Confidence 8766544 1 1 34689999998888889998774 456 599999999998776554444 3568999999
Q ss_pred cccCCCCceEEEEeecCHHHHHHHHH-----------H--HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHH
Q 018172 187 KCTGHAGSRIGWALVKDTEVARKMTR-----------F--IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSE 253 (360)
Q Consensus 187 K~~~~~G~r~G~~~~~~~~~~~~l~~-----------~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 253 (360)
|.+|++| +|+++. .+++.+.+.. . ......++|.....++.++++.+... .-++++.++.++
T Consensus 194 K~~gp~G--~g~l~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~--gG~~~i~~~~~~ 268 (361)
T 3m5u_A 194 KNAGISG--LSCIFI-RKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQ--GGLDKVHEKNSQ 268 (361)
T ss_dssp TTSSCTT--CEEEEE-EHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTT--TCHHHHHHHHHH
T ss_pred hccCCCc--cEEEEE-cHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHc--cCHHHHHHHHHH
Confidence 9999888 788887 6777766543 1 11122356667777777788766431 258999999999
Q ss_pred HHHHHHHHHHhcCCc-ccCCCCCcccccccccCCCCCCcccccCCc---h-HHHHHHHHhhCeeeeCCCCCCCCCCeEEE
Q 018172 254 RWNMLRQVIRQSGVF-GLPEYPLEYCNFTGKFTNSHPGFAWLESKE---D-EDCEKLLRAERIMARGGRRFGADAKYARV 328 (360)
Q Consensus 254 ~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~l~~~gI~~~pg~~f~~~~~~~R~ 328 (360)
..+++++.|++++++ ....+... ..+..+.+.+++ . ..+...|+++||.+++|... .+.+|+
T Consensus 269 l~~~l~~~L~~~~g~~~~~~~~~~----------rs~~ivsf~~~~~~~~~~~~~~~L~~~gI~~~~g~~~---~g~iRi 335 (361)
T 3m5u_A 269 KATMLYECIDLSNGFYKGHADKKD----------RSLMNVSFNIAKNKDLEPLFVKEAEEAGMIGLKGHRI---LGGIRA 335 (361)
T ss_dssp HHHHHHHHHHTSTTSEEESSCGGG----------BCSSEEEEEESSCTTHHHHHHHHHHHTTEECCBCCTT---TCSEEE
T ss_pred HHHHHHHHHHHCCCeeeccCCHHH----------cCCeEEEEECCCchhhhHHHHHHHHHCCCEEecCCCc---cCeEEE
Confidence 999999999999754 32211110 111134455554 2 45678889999999887532 246999
Q ss_pred EecC--ChHHHHHHHHHHHHHHhch
Q 018172 329 SMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 329 s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
|+.. ++||+++++++|++++++.
T Consensus 336 S~~~~~t~edId~l~~al~~~~~~~ 360 (361)
T 3m5u_A 336 SIYNALNLDQVKTLCEFMKEFQGKY 360 (361)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EccCCCCHHHHHHHHHHHHHHHHhc
Confidence 9966 8999999999999998764
No 219
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.85 E-value=6e-20 Score=177.96 Aligned_cols=300 Identities=12% Similarity=0.037 Sum_probs=198.4
Q ss_pred cccCCCCccccccHHHHHHHHHHHh-hcCCCCCCCCcEEEcCChHHHHHHHHHhhcC--------------CCCCCCceE
Q 018172 26 YLSDMGNVCWFLVPELAEAINNLHH-VVDNAVSDGRHIVIGTGSTQLYQAALYALSS--------------PGGPEPISV 90 (360)
Q Consensus 26 ~y~~~~g~~~~~~~~lr~~la~~~~-~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~--------------~gd~~~~~v 90 (360)
.|....+. .++++++++++. ..|.+..+ +.+++|+|+|+++..++..+.+ +++. |
T Consensus 126 ~~~~~p~~-----~~le~~~~~~l~~~~g~~~~~-~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~----v 195 (511)
T 3vp6_A 126 TYEIAPVF-----VLMEQITLKKMREIVGWSSKD-GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLV----L 195 (511)
T ss_dssp CTTTCHHH-----HHHHHHHHHHHHHHHTCCSSS-CEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEE----E
T ss_pred CcccCchH-----HHHHHHHHHHHHHHhCCCCCC-CceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeE----E
Confidence 35544444 788888887743 33544333 4799999999999888877754 3444 9
Q ss_pred EEeCCCCCCcHHHHHHhCC---eeeeecCCccc------ccc--CC------CeeEEEEcCCCCCCcccch-HHHHHHhh
Q 018172 91 VSAAPYYSQYPAETDYLRS---GLYKWDGDANT------FDK--NN------GAYIEVVNSPNNPDGTIRE-AVLAKVNR 152 (360)
Q Consensus 91 l~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~------~~~--~~------~~~~i~~~~p~NPtG~~~~-~~~~~~~~ 152 (360)
++++++|.++...++.+|. +++.++.+.++ ++. ++ .+++|++++|+||||.+.+ +.+.++|+
T Consensus 196 ~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~ 275 (511)
T 3vp6_A 196 FTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICE 275 (511)
T ss_dssp EEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHH
T ss_pred EECCCchHHHHHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHH
Confidence 9999999999999999998 88888876432 211 11 2889999999999999977 77888999
Q ss_pred hcCcEEEEeecccCCCCC-----c-CCCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHh-hc--------
Q 018172 153 SAEGKLIHDLAYYWPQYT-----P-ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIE-LG-------- 217 (360)
Q Consensus 153 ~~~~~li~D~ay~~~~~~-----~-~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~-~~-------- 217 (360)
++|+++++|++|+.+... . +.+....+.++.+++|.++.| ..+|+++.+++++.+....... +.
T Consensus 276 ~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~ 354 (511)
T 3vp6_A 276 KYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMHASYLFQQDKHYD 354 (511)
T ss_dssp HHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSC
T ss_pred HcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHhccCCccccCcccccc
Confidence 999999999999864321 1 112335578899999988744 6688888866665555421110 00
Q ss_pred ------cc----c--CChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCC---CCCccccccc
Q 018172 218 ------SI----G--VSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPE---YPLEYCNFTG 282 (360)
Q Consensus 218 ------~~----~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~---~~~~~~~~~~ 282 (360)
.. + .......++...+. ...+++..++..++.+++.+.|++++++.+.. |.....+|.
T Consensus 355 ~~~~~~~~~~~~~r~~~al~~~~al~~~g------~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~- 427 (511)
T 3vp6_A 355 VSYDTGDKAIQCGRHVDIFKFWLMWKAKG------TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFW- 427 (511)
T ss_dssp GGGCCGGGSSCSSCCCCHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEE-
T ss_pred cccCccCCCCCCCCchHHHHHHHHHHHHh------HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEE-
Confidence 00 0 11222333333221 27788999999999999999999988777764 322222211
Q ss_pred ccCCCCCCcccccCC----c----------hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec-C--ChHHHHHHHHHHH
Q 018172 283 KFTNSHPGFAWLESK----E----------DEDCEKLLRAERIMARGGRRFGADAKYARVSML-S--REEIFNIFLERLS 345 (360)
Q Consensus 283 ~~~~~~~~~~~~~~~----~----------~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~-~--~~e~~~~~~~~l~ 345 (360)
+.-.... + ...+.+.|.++|+.+......+...+++|++++ . +++++++++++|+
T Consensus 428 --------~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~ 499 (511)
T 3vp6_A 428 --------YIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIE 499 (511)
T ss_dssp --------ECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHH
T ss_pred --------EeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHH
Confidence 0000010 0 135777888888765541111212357999984 3 8899999999999
Q ss_pred HHHhch
Q 018172 346 AIQGGS 351 (360)
Q Consensus 346 ~~~~~~ 351 (360)
++-+..
T Consensus 500 ~~~~~~ 505 (511)
T 3vp6_A 500 RLGQDL 505 (511)
T ss_dssp HHHC--
T ss_pred HHHHhh
Confidence 887653
No 220
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.84 E-value=1.5e-19 Score=173.20 Aligned_cols=280 Identities=13% Similarity=0.036 Sum_probs=175.4
Q ss_pred HHHH----HHHHHHHhhcCCCCCCCC---cEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHH--------H
Q 018172 39 PELA----EAINNLHHVVDNAVSDGR---HIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPA--------E 103 (360)
Q Consensus 39 ~~lr----~~la~~~~~~~~~~~~~~---~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~--------~ 103 (360)
.+++ +.+++++|. +.+ ..++++|+++++..++.+++++||+ |+++++.|.++.. .
T Consensus 99 ~~lE~~a~~~~a~l~g~------~~~~~~~~v~~~sGt~An~~al~al~~pGD~----Vl~~~~~h~g~l~h~~~~~~~~ 168 (490)
T 2a7v_A 99 DEIELLCQRRALEAFDL------DPAQWGVNVQPYSGSPANLAVYTALLQPHDR----IMGLDLPDGGHLTHGYMSDVKR 168 (490)
T ss_dssp THHHHHHHHHHHHHTTC------CTTTEEEECCCSSHHHHHHHHHHHHCCSCEE----CCC-------------------
T ss_pred HHHHHHHHHHHHHHcCC------CcccCceEEeCCchHHHHHHHHHHHcCCCCE----ecccCccccccccchhhhcchh
Confidence 3666 788888885 332 2345567899999999999999998 9999999875421 2
Q ss_pred HHHhCCe--eeeecCCcccccc----------CCCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecccC-----
Q 018172 104 TDYLRSG--LYKWDGDANTFDK----------NNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYW----- 166 (360)
Q Consensus 104 ~~~~g~~--~~~~~~~~~~~~~----------~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay~~----- 166 (360)
+...|.. ++.++++.+.... ..++++|+++.++||+...+ +.+.++|+++|+++++|++|..
T Consensus 169 i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s~~~~~~dl-~~i~~ia~~~g~~livD~Ah~~glv~~ 247 (490)
T 2a7v_A 169 ISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLIDY-ARMREVCDEVKAHLLADMAHISGLVAA 247 (490)
T ss_dssp ------------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCH-HHHHHHHHHTTCEEEEECGGGHHHHHT
T ss_pred HHHcCCeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCCCCCCcccH-HHHHHHHHHcCCEEEEccccccccccC
Confidence 3344543 3344444221111 13689999999999864322 6677888889999999999862
Q ss_pred CC-CCcCCCCCCccEEEeccccccCCCCceEEEEeecCH--------------HHHHHHHHHHhhcccc-CChHHHHHHH
Q 018172 167 PQ-YTPITGAADHDIMLFTLSKCTGHAGSRIGWALVKDT--------------EVARKMTRFIELGSIG-VSKESQLRAA 230 (360)
Q Consensus 167 ~~-~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~--------------~~~~~l~~~~~~~~~~-~~~~~~~~~~ 230 (360)
+. ..++ ...+++++|+||+++ |.|.|+++++++ ++.+.+++.......+ ++.....++.
T Consensus 248 g~~~~~~---~~aDiv~~S~hK~l~--Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla 322 (490)
T 2a7v_A 248 KVIPSPF---KHADIVTTTTHKTLR--GARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVA 322 (490)
T ss_dssp TSSCCGG---GTCSEEEEESSGGGC--SCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHH
T ss_pred CcCCCCC---CCCCEEEECCcccCc--cccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHH
Confidence 11 1222 246799999999874 567799998543 3566776654433333 3333333334
Q ss_pred HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHH
Q 018172 231 KILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLL 306 (360)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l 306 (360)
.++..... ..+++.++++.++++++.+.|++. ++.+... + ....++|+++.. ...+.+.|
T Consensus 323 ~Al~~~~~---~~~~~~~~~~~~na~~L~~~L~~~-G~~v~~~-~-----------t~t~lv~vdl~~~g~~~~~~~~~L 386 (490)
T 2a7v_A 323 VALKQACT---PMFREYSLQVLKNARAMADALLER-GYSLVSG-G-----------TDNHLVLVDLRPKGLDGARAERVL 386 (490)
T ss_dssp HHHHHHHS---HHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGG-S-----------CSSSEEEEECTTTTCCHHHHHHHH
T ss_pred HHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHHc-CcEEecC-C-----------CCCeEEEEEeCCCCCCHHHHHHHH
Confidence 34543221 455778889999999999999987 4444321 1 122356777643 27788899
Q ss_pred HhhCeeeeCCCCCC----CCCCeEEEEec------CChHHHHHHHHHHHHHHhc
Q 018172 307 RAERIMARGGRRFG----ADAKYARVSML------SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 307 ~~~gI~~~pg~~f~----~~~~~~R~s~~------~~~e~~~~~~~~l~~~~~~ 350 (360)
++.||.+..+..++ ..+..+|++.. .++++++++++.|.+++..
T Consensus 387 ~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 387 ELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp HHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHh
Confidence 99999998654332 13568999762 2789999999999998864
No 221
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.84 E-value=3.5e-20 Score=171.74 Aligned_cols=281 Identities=11% Similarity=-0.008 Sum_probs=194.6
Q ss_pred cHHHHHHHHHHHhhcCCCCCCC-CcEEE-cCChHHHHHHHHHhhcCC--CCCCCceEEEeCCCCCCc--HHHHHHhCCee
Q 018172 38 VPELAEAINNLHHVVDNAVSDG-RHIVI-GTGSTQLYQAALYALSSP--GGPEPISVVSAAPYYSQY--PAETDYLRSGL 111 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~-~~i~~-t~G~t~~l~~~~~~l~~~--gd~~~~~vl~~~p~~~~~--~~~~~~~g~~~ 111 (360)
+++.|+.++++++. ++ ++|++ |+|+|+++++++..+..+ ||+ +++..-++... ...++..|..+
T Consensus 60 ~~~ar~~la~ll~~------~~~~evif~t~~~T~a~n~a~~~l~~~~~Gd~----v~~~~~g~~~~~~~~~a~~~G~~~ 129 (377)
T 3e77_A 60 INNTENLVRELLAV------PDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRC----ADYVVTGAWSAKAAEEAKKFGTIN 129 (377)
T ss_dssp HHHHHHHHHHHHTC------CTTEEEEEESSHHHHHHHHHHHHHGGGSTTCE----EEECCCSHHHHHHHHHHTTTSEEE
T ss_pred HHHHHHHHHHHhCC------CCCCeEEEEcCchHHHHHHHHHhccCCCCCCe----EEEEECCHHHHHHHHHHHHhCCce
Confidence 37889999999986 33 57888 589999999999999865 787 77665544332 23455568777
Q ss_pred eeecCCcc------cc--ccCCCeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccEEEe
Q 018172 112 YKWDGDAN------TF--DKNNGAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDIMLF 183 (360)
Q Consensus 112 ~~~~~~~~------~~--~~~~~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i~~~ 183 (360)
+.++.+.+ .+ ..++++++|.+++..|.||.+.+- +|+++|+++++|.+++.+..+......+ +++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi----i~~~~~~~~~vD~~q~~g~~~id~~~~~--~~~~ 203 (377)
T 3e77_A 130 IVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF----IPDVKGAVLVCDMSSNFLSKPVDVSKFG--VIFA 203 (377)
T ss_dssp ECSCCCSSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS----CCCCTTCCEEEECTTTTTSSCCCGGGCS--EEEE
T ss_pred EEeccCCCcCCCCChHHhccCCCccEEEEeCccCchheEchh----hhccCCCEEEEEcccccCCCCCchhhcC--EEEE
Confidence 76665422 11 125789999999888889999886 4677999999999998776665555554 4788
Q ss_pred ccccccCCCCceEEEEeecCHHHHHHH----------HHH--HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 184 TLSKCTGHAGSRIGWALVKDTEVARKM----------TRF--IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 184 S~sK~~~~~G~r~G~~~~~~~~~~~~l----------~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
|.+|.+|++| +|+++.+ +++.+.+ ... ......++|.....++.++++.+... .-++++.++.
T Consensus 204 s~~K~~gp~G--~g~l~~~-~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~--GG~~~i~~~~ 278 (377)
T 3e77_A 204 GAQKNVGSAG--VTVVIVR-DDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNN--GGAAAMEKLS 278 (377)
T ss_dssp EGGGTTSCTT--CEEEEEE-TTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHT--THHHHHHHHH
T ss_pred ecccccCCCc--cEEEEEc-HHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHc--cCHHHHHHHH
Confidence 9999999888 6777663 3332111 111 11123456666777777788765431 2689999999
Q ss_pred HHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc----h---HHHHHHHHhhCeeeeCCCCCCCCCC
Q 018172 252 SERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----D---EDCEKLLRAERIMARGGRRFGADAK 324 (360)
Q Consensus 252 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~l~~~gI~~~pg~~f~~~~~ 324 (360)
+++.+++++.|++++++.+....... ..+..+.+.+++ . ..+.+.|.++||.+++|... .+
T Consensus 279 ~~l~~~l~~~L~~~~g~~~~~~~~~~---------rs~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~~~~g~~~---~g 346 (377)
T 3e77_A 279 SIKSQTIYEIIDNSQGFYVCPVEPQN---------RSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRS---VG 346 (377)
T ss_dssp HHHHHHHHHHHHTSTTSEECCSCGGG---------BCSSEEEEEESSTTCCHHHHHHHHHHHHHTTEESCBCCTT---TC
T ss_pred HHHHHHHHHHHHhcCCceecCCCHHH---------cCCcEEEEEcCCCCCchhHHHHHHHHHHHCCcEEeCCCCc---CC
Confidence 99999999999999766532111110 011123444443 1 24556667899999988632 45
Q ss_pred eEEEEecC--ChHHHHHHHHHHHHHHhch
Q 018172 325 YARVSMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 325 ~~R~s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
.+|+|+.. ++|++++++++|++++++.
T Consensus 347 ~iRiS~~~~~t~edId~l~~al~~~~~~~ 375 (377)
T 3e77_A 347 GIRASLYNAVTIEDVQKLAAFMKKFLEMH 375 (377)
T ss_dssp SEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 79999966 8999999999999998764
No 222
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.83 E-value=5.3e-19 Score=178.01 Aligned_cols=291 Identities=9% Similarity=-0.008 Sum_probs=192.3
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
..++++.++++++. ++.+++++|+++++..++.+++++||. |+++.|+|.++...+...|++++.++.+
T Consensus 207 v~~~ee~la~l~G~-------d~~i~~~~Gtt~a~~~~i~al~~~GD~----Vlv~~~~h~s~~~~~~~~G~~~v~v~~~ 275 (755)
T 2vyc_A 207 FGESEKYAARVFGA-------DRSWSVVVGTSGSNRTIMQACMTDNDV----VVVDRNCHKSIEQGLMLTGAKPVYMVPS 275 (755)
T ss_dssp HHHHHHHHHHHHTC-------SEEEEESSHHHHHHHHHHHHHCCTTCE----EEEESSCCHHHHHHHHHHCCEEEEECCC
T ss_pred HHHHHHHHHHHhCC-------CceEEECCcHHHHHHHHHHHhcCCCCE----EEECCCchHHHHHHHHHcCCEEEEEeCC
Confidence 48999999999995 357889999999999999999999998 9999999999999999999999988765
Q ss_pred cc--c----c-----cc---------CCCee--------EEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCC-
Q 018172 118 AN--T----F-----DK---------NNGAY--------IEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWP- 167 (360)
Q Consensus 118 ~~--~----~-----~~---------~~~~~--------~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~- 167 (360)
.+ + + +. .++++ ++++++| ||||.+.+ +.+.++|+++++++++|++|+..
T Consensus 276 ~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~ 354 (755)
T 2vyc_A 276 RNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_dssp BCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTG
T ss_pred CCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhc
Confidence 32 1 1 11 23444 8999998 69999988 77888899999999999999731
Q ss_pred --C-----CCcCC----C-CCCccEEEeccccccCCCCce-EEEEeecCH--HH-HHHHHHH-HhhccccCChHHHHHHH
Q 018172 168 --Q-----YTPIT----G-AADHDIMLFTLSKCTGHAGSR-IGWALVKDT--EV-ARKMTRF-IELGSIGVSKESQLRAA 230 (360)
Q Consensus 168 --~-----~~~~~----~-~~~~~i~~~S~sK~~~~~G~r-~G~~~~~~~--~~-~~~l~~~-~~~~~~~~~~~~~~~~~ 230 (360)
. ..++. + ...++++++|+||.++ |.+ .|+++.++. .+ ...+... ....+.+++.+...++.
T Consensus 355 ~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~--g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~ 432 (755)
T 2vyc_A 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLN--ALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASND 432 (755)
T ss_dssp GGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSS--CCTTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHH
T ss_pred ccCcccCCcchhcCCcCCccCCCeEEEECcccccc--CcCCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 0 11111 1 1234569999999864 555 566666332 11 1223222 22234456666555555
Q ss_pred HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC---------cccCCCCCc-------------------------
Q 018172 231 KILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGV---------FGLPEYPLE------------------------- 276 (360)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---------~~~~~~~~~------------------------- 276 (360)
++++.+.. ...++..+++.++.+.+++.|+++++ +.+..+...
T Consensus 433 aA~~~l~~---~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (755)
T 2vyc_A 433 VAVSMMDG---NSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDC 509 (755)
T ss_dssp HHHHHHST---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGG
T ss_pred HHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhh
Confidence 55654432 22455666666777777777766544 333332210
Q ss_pred --------ccccccccCCC----CCCcccccCCc-------------hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec
Q 018172 277 --------YCNFTGKFTNS----HPGFAWLESKE-------------DEDCEKLLRAERIMARGGRRFGADAKYARVSML 331 (360)
Q Consensus 277 --------~~~~~~~~~~~----~~~~~~~~~~~-------------~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~ 331 (360)
...|... ..+ ...-+.+.+++ ...+.+.|+++||.+... +.+.+|++++
T Consensus 510 ~~~~~~~~~h~~~~~-~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~-----~~~~v~~~~~ 583 (755)
T 2vyc_A 510 WVMHPGESWHGFKDI-PDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRT-----TDFQIMFLFS 583 (755)
T ss_dssp TBCCTTCTTTCCTTC-CTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEE-----CSSEEEEECC
T ss_pred hccCccccccccccc-CCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeec-----CCCeEEEEEC
Confidence 0000000 000 11122333331 167888898999987542 3678999886
Q ss_pred C--ChHHHHHHHHHHHHHHhch
Q 018172 332 S--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 332 ~--~~e~~~~~~~~l~~~~~~~ 351 (360)
. +++++++++++|.++.+..
T Consensus 584 ~g~t~~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 584 MGVTRGKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp TTCCTTTTHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhh
Confidence 6 8999999999999997643
No 223
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.72 E-value=4.9e-22 Score=189.30 Aligned_cols=276 Identities=13% Similarity=0.032 Sum_probs=183.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc--CCCCCCCceEEEeCCCCCCcHHHHH----HhCC--e
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS--SPGGPEPISVVSAAPYYSQYPAETD----YLRS--G 110 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~--~~gd~~~~~vl~~~p~~~~~~~~~~----~~g~--~ 110 (360)
.+|.+.+++++. ..+.+++++|+++++..++..+. ..++. |+..+++|......+. ..|. .
T Consensus 143 ~~Lae~L~~~~p-------~~~~v~~~nSGseA~~~Aik~ar~~tgr~~----ii~~~~~yHG~~~~~~sg~~~~g~~~~ 211 (465)
T 2yky_A 143 ALFAEAVCDRFP-------SIDLVRFTNSGTEANLMALATATAITGRKT----VLAFDGGYHGGLLNFASGHAPTNAPYH 211 (465)
Confidence 677777777763 12479999999999999988763 33465 9999999987654333 1233 2
Q ss_pred eeeec-CCcccccc--C---CCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCcC--CCCCC
Q 018172 111 LYKWD-GDANTFDK--N---NGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTPI--TGAAD 177 (360)
Q Consensus 111 ~~~~~-~~~~~~~~--~---~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~~--~~~~~ 177 (360)
+..++ .|.+.++. + +++++|++...+|+||.+.+ +.+.++|+++|+++|+||+|. ...... ....+
T Consensus 212 ~~~~~~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~g 290 (465)
T 2yky_A 212 VVLGVYNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLG 290 (465)
Confidence 23332 23333332 2 56778877655667997765 467788999999999999998 422111 12223
Q ss_pred ccEEEeccccccCCCCceEEEEeecCHHHHHHHHH-----HHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHH
Q 018172 178 HDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTR-----FIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMS 252 (360)
Q Consensus 178 ~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 252 (360)
...-+.||||.+| .|+|+||+++ ++++++.+.. .....+++.|+++|.++.++|+.+.+. ...++++
T Consensus 291 v~pDi~t~sK~lg-~G~piG~v~~-~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~~------~~~~~~~ 362 (465)
T 2yky_A 291 ISADLTTLGKYIG-GGMSFGAFGG-RRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYTR------QAASDLS 362 (465)
Confidence 3344669999999 5999999998 8899998876 234467789999999998888866432 3445555
Q ss_pred HHHHHHHHHHHhcC-CcccCCCCCcccccccccCCCCCCcccccCCc----------------hHHHHHHHHhhCeeeeC
Q 018172 253 ERWNMLRQVIRQSG-VFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----------------DEDCEKLLRAERIMARG 315 (360)
Q Consensus 253 ~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~l~~~gI~~~p 315 (360)
++.+++.+.|+++. ...+. ..+++.++++|+.+.+ ...+.+.|.++||.+.|
T Consensus 363 ~~~~~l~~~L~~~~~~~~~~-----------~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p 431 (465)
T 2yky_A 363 ASGDRFRANLNRIAVENQAP-----------LQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAP 431 (465)
Confidence 55555555555441 00000 0112344456665532 13466677789999999
Q ss_pred CCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHhchh
Q 018172 316 GRRFGADAKYARVSMLSREEIFNIFLERLSAIQGGSI 352 (360)
Q Consensus 316 g~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~~~~ 352 (360)
+. |+. +++..++|+++++++++.+++.+.+
T Consensus 432 ~~-~~~------~s~~~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 432 RG-MYA------LSLEIADAGRDAFAEALADFIGEQR 461 (465)
Confidence 65 321 7776799999999999999987653
No 224
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.81 E-value=5.8e-19 Score=169.92 Aligned_cols=287 Identities=12% Similarity=-0.030 Sum_probs=194.6
Q ss_pred HHHHHHHHHHHh-hcCCCCCC-------CCcEEEcCChHHHHHHHHHhhcC-------------------CCCCCCceEE
Q 018172 39 PELAEAINNLHH-VVDNAVSD-------GRHIVIGTGSTQLYQAALYALSS-------------------PGGPEPISVV 91 (360)
Q Consensus 39 ~~lr~~la~~~~-~~~~~~~~-------~~~i~~t~G~t~~l~~~~~~l~~-------------------~gd~~~~~vl 91 (360)
.++++.+.+++. ..|.+... ....++|+|+|+++..++....+ +++. |+
T Consensus 117 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~----v~ 192 (481)
T 4e1o_A 117 TELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLV----AY 192 (481)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEE----EE
T ss_pred HHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeE----EE
Confidence 889999887754 33443211 12678999999999888776642 2344 99
Q ss_pred EeCCCCCCcHHHHHHhCCeeeeecCCccc-ccc-------CC------CeeEEEEcCCCCCCcccch-HHHHHHhhhcCc
Q 018172 92 SAAPYYSQYPAETDYLRSGLYKWDGDANT-FDK-------NN------GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEG 156 (360)
Q Consensus 92 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~-------~~------~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~ 156 (360)
+++++|.++...+...|.+++.++.+.++ ++. ++ .+++|+++.++|+||.+-+ +++.++|+++|+
T Consensus 193 ~s~~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~ 272 (481)
T 4e1o_A 193 ASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGL 272 (481)
T ss_dssp EETTSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTC
T ss_pred EcCcchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCC
Confidence 99999999999999999999999876332 221 11 2678899999999999877 778889999999
Q ss_pred EEEEeecccCCCC-----CcC-CCCCCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHH-hhc------------
Q 018172 157 KLIHDLAYYWPQY-----TPI-TGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFI-ELG------------ 217 (360)
Q Consensus 157 ~li~D~ay~~~~~-----~~~-~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~-~~~------------ 217 (360)
++++|++|+.... ... .+....+.++.++||.++.| ..+|+++.+++.......... .+.
T Consensus 273 ~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 351 (481)
T 4e1o_A 273 WLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVH-FDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFM 351 (481)
T ss_dssp EEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGG
T ss_pred eEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCC-CceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCcc
Confidence 9999999985321 111 12223478889999988744 457777776666543211000 000
Q ss_pred --c--cc--CChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCc
Q 018172 218 --S--IG--VSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGF 291 (360)
Q Consensus 218 --~--~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (360)
. .+ .....+.++...+. ...++++.++..++.+++.+.|++++++.+..+... ++
T Consensus 352 ~~~~~~~r~~~~l~~~~al~~~g------~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~-------------~~ 412 (481)
T 4e1o_A 352 HWQIPLSRRFRSVKLWFVIRSFG------VKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHL-------------GL 412 (481)
T ss_dssp GGSSSSCCCCTHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCS-------------SE
T ss_pred cccccCCCCccHHHHHHHHHHhH------HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCce-------------eE
Confidence 0 00 12333444433332 267888899999999999999999987777544322 25
Q ss_pred ccccCCc-h---HHHHHHHHhhCe-eeeCCCCCCCCCCeEEEEecC---ChHHHHHHHHHHHHHHhch
Q 018172 292 AWLESKE-D---EDCEKLLRAERI-MARGGRRFGADAKYARVSMLS---REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 292 ~~~~~~~-~---~~~~~~l~~~gI-~~~pg~~f~~~~~~~R~s~~~---~~e~~~~~~~~l~~~~~~~ 351 (360)
++++++. . ..+.+.|.++|+ .+.|+...+ ..++|+++.. +++++++++++|++++++.
T Consensus 413 v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g--~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~l 478 (481)
T 4e1o_A 413 VVFRLKGPNSLTENVLKEIAKAGRLFLIPATIQD--KLIIRFTVTSQFTTRDDILRDWNLIRDAATLI 478 (481)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHCSSBCEEEEETT--EEEEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCchHHHHHHHHHHHhCCeEEEEeeEECC--EEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5666543 1 566777777774 445543322 4689999754 6899999999999988653
No 225
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.81 E-value=3.7e-19 Score=165.67 Aligned_cols=277 Identities=12% Similarity=0.025 Sum_probs=187.6
Q ss_pred cHHHHHHHHHHHhhcCCCCCCC-CcEEE-cCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCC--cHHHHHHhCCeeee
Q 018172 38 VPELAEAINNLHHVVDNAVSDG-RHIVI-GTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQ--YPAETDYLRSGLYK 113 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~-~~i~~-t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~--~~~~~~~~g~~~~~ 113 (360)
+++.|+.++++++. ++ ++|++ |+|+|+++++++..++++||+ +++..-++.. +...++..| ++..
T Consensus 74 ~~~ar~~la~ll~~------~~~~evif~t~~~T~a~n~ai~~l~~~gd~----v~~~~~~~~~~~~~~~a~~~G-~v~~ 142 (386)
T 3qm2_A 74 AEEAEQDFRDLLNI------PSNYKVLFCHGGGRGQFAGVPLNLLGDKTT----ADYVDAGYWAASAIKEAKKYC-APQI 142 (386)
T ss_dssp CHHHHHHHHHHHTC------CTTEEEEEEESCTTHHHHHHHHHHCTTCCE----EEEEESSHHHHHHHHHHTTTS-EEEE
T ss_pred HHHHHHHHHHHhCC------CCCceEEEEcCCchHHHHHHHHhccCCCCe----EEEEeCCHHHHHHHHHHHHhC-CeEE
Confidence 48999999999996 43 47888 699999999999999999987 6544332222 233455568 8887
Q ss_pred ecCC--ccc--ccc-------CCCeeEEEEcCCCCCCccc-ch-HHHHHHhhhcCcEEEEeecccCCCCCcCCCCCCccE
Q 018172 114 WDGD--ANT--FDK-------NNGAYIEVVNSPNNPDGTI-RE-AVLAKVNRSAEGKLIHDLAYYWPQYTPITGAADHDI 180 (360)
Q Consensus 114 ~~~~--~~~--~~~-------~~~~~~i~~~~p~NPtG~~-~~-~~~~~~~~~~~~~li~D~ay~~~~~~~~~~~~~~~i 180 (360)
++.+ ..+ +.. +++|++|.+++-.|.||.. .+ +++ + +|+++++|.+++.+..+......+ +
T Consensus 143 v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~pi~~i---~--~g~~~~vDa~qs~g~~pidv~~~~--~ 215 (386)
T 3qm2_A 143 IDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDETPDF---G--PEVVVTADFSSTILSAPLDVSRYG--V 215 (386)
T ss_dssp EECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCCCCCC---C--TTCCEEEECTTTTTSSCCCGGGCS--E
T ss_pred EecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCchhhh---c--CCCEEEEEcccccCCCCCCccccC--E
Confidence 7766 333 221 4689999999888889996 44 333 2 799999999998776665555554 5
Q ss_pred EEeccccccCCCCceEEEEeecCHHHHHHH----------HHHH--hhccccCChHHHHHHHHHhcccCCCchh-HHHHH
Q 018172 181 MLFTLSKCTGHAGSRIGWALVKDTEVARKM----------TRFI--ELGSIGVSKESQLRAAKILGIVSDDYPN-FFEYG 247 (360)
Q Consensus 181 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l----------~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~ 247 (360)
.+.|.+|.+|++| +|+++. .+++.+.+ .... .....++|.....++.++++.+.. . -++++
T Consensus 216 ~~~s~hK~lGP~G--~g~l~v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~---~gG~~~i 289 (386)
T 3qm2_A 216 IYAGAQKNIGPAG--LTLVIV-REDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKA---QGGVAAM 289 (386)
T ss_dssp EEEETTTTTCCTT--EEEEEE-EGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHH---HTHHHHH
T ss_pred EEEecccccCCCc--cEEEEE-CHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHH---hcCHHHH
Confidence 6789999999888 788777 34332111 1111 112235566666677777775532 3 48999
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCCc-h--HHHHHHHHhhCeeeeCCCCCCCCCC
Q 018172 248 RRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-D--EDCEKLLRAERIMARGGRRFGADAK 324 (360)
Q Consensus 248 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~l~~~gI~~~pg~~f~~~~~ 324 (360)
.++.++.++++++.|++++.......... ..+..+.+.+++ . ..+...|+++||.+++|... .+
T Consensus 290 ~~~~~~l~~~l~~~l~~~~~~~~~~~~~~----------rs~~iv~f~~~~~~~~~~~~~~L~~~gI~~~~g~~~---~~ 356 (386)
T 3qm2_A 290 HKINQQKAELLYGVIDNSDFYRNDVAQAN----------RSRMNVPFQLADNTLDKVFLEESFAAGLHALKGHRV---VG 356 (386)
T ss_dssp HHHHHHHHHHHHHHHHTCSSEECCBCGGG----------BCSSEEEEEESSGGGHHHHHHHHHHTTEECCBCCTT---TC
T ss_pred HHHHHHHHHHHHHHHHHCCCcccCCCHHH----------cCceEEEEECCCccccHHHHHHHHHCCCEEeCCCCC---cC
Confidence 99999999999999998843222111100 111234455553 1 45566688999999887533 24
Q ss_pred eEEEEecC--ChHHHHHHHHHHHHHHhch
Q 018172 325 YARVSMLS--REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 325 ~~R~s~~~--~~e~~~~~~~~l~~~~~~~ 351 (360)
.+|+|+.. ++||+++++++|+++.++.
T Consensus 357 ~iRiS~~~~~t~edId~l~~~l~~~~~~~ 385 (386)
T 3qm2_A 357 GMRASIYNAMPIEGVKALTDFMIDFERRH 385 (386)
T ss_dssp SEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 59999966 8999999999999998753
No 226
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.80 E-value=5.7e-19 Score=169.60 Aligned_cols=291 Identities=12% Similarity=0.016 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHh-hcCCCCC------CCCcEEEcCChHHHHHHHHHhhcCC--------CC-------CCCceEEEeCCC
Q 018172 39 PELAEAINNLHH-VVDNAVS------DGRHIVIGTGSTQLYQAALYALSSP--------GG-------PEPISVVSAAPY 96 (360)
Q Consensus 39 ~~lr~~la~~~~-~~~~~~~------~~~~i~~t~G~t~~l~~~~~~l~~~--------gd-------~~~~~vl~~~p~ 96 (360)
.++++++.+++. ..|.+.. .....++|+|+|+++..++....+. |+ ..+..|+++.++
T Consensus 112 ~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~ 191 (475)
T 3k40_A 112 TELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQA 191 (475)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTS
T ss_pred HHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCc
Confidence 789998877653 3344321 1126899999999988777765311 10 001239999999
Q ss_pred CCCcHHHHHHhCCeeeeecCCccccccC-------C------CeeEEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEee
Q 018172 97 YSQYPAETDYLRSGLYKWDGDANTFDKN-------N------GAYIEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDL 162 (360)
Q Consensus 97 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~------~~~~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ 162 (360)
|.++...+...|++++.++.|.++++.+ + .+++|+++.++|+||.+-+ +++.++|+++|+++++|+
T Consensus 192 H~s~~~~~~~~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~ 271 (475)
T 3k40_A 192 HSSVERAGLLGGVKLRSVQSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDA 271 (475)
T ss_dssp CHHHHHHHHHHTCEEEEECCBTTBCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEEC
T ss_pred hHHHHHHHHHcCCceEEEECCCCCcCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeH
Confidence 9999999999999999999865543221 1 2678899999999999977 778889999999999999
Q ss_pred cccCCCC-----Cc-CCCCCCccEEEeccccccCCCCceEEEEeecCHHHH-HHHHHHHhhc--------------c--c
Q 018172 163 AYYWPQY-----TP-ITGAADHDIMLFTLSKCTGHAGSRIGWALVKDTEVA-RKMTRFIELG--------------S--I 219 (360)
Q Consensus 163 ay~~~~~-----~~-~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~-~~l~~~~~~~--------------~--~ 219 (360)
+|+.... .. +.+....+.+..|+||.++ ....+|+++.++++.. +.+.....+. + .
T Consensus 272 A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~-~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 350 (475)
T 3k40_A 272 AYAGSAFICPEYRHLMKGIESADSFNFNPHKWML-VNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPL 350 (475)
T ss_dssp TTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSS-CCSSCEEEEESSGGGC---------------------------CC
T ss_pred HhHHHHHhCHhhHHHhcCcccCCEEEECchhccC-CCCceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCcccccccC
Confidence 9985321 11 1122245788999999776 3355788877665442 2221100000 0 0
Q ss_pred c--CChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcccccccccCCCCCCcccccCC
Q 018172 220 G--VSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESK 297 (360)
Q Consensus 220 ~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (360)
+ .....+.++...+. ...+++..++..++.+++.+.|++++++.+..+... +.++++++
T Consensus 351 sr~~~~l~l~~al~~~g------~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~-------------~iv~f~~~ 411 (475)
T 3k40_A 351 GRRFRALKLWFVLRLYG------VENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINM-------------GLVCFRLK 411 (475)
T ss_dssp CGGGTHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBT-------------TEEEEEES
T ss_pred CCcccHHHHHHHHHHHh------HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCce-------------EEEEEEeC
Confidence 0 11222333333222 266788889999999999999999988777654322 24455543
Q ss_pred c----hHHHHHHHHhhCe-eeeCCCCCCCCCCeEEEEecC---ChHHHHHHHHHHHHHHhch
Q 018172 298 E----DEDCEKLLRAERI-MARGGRRFGADAKYARVSMLS---REEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 298 ~----~~~~~~~l~~~gI-~~~pg~~f~~~~~~~R~s~~~---~~e~~~~~~~~l~~~~~~~ 351 (360)
. ...+.+.|.++|+ .+.|+..++ ..++|++++. +++++++++++|++++++.
T Consensus 412 ~~~~~~~~l~~~L~~~g~~~~~~~~~~g--~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~ 471 (475)
T 3k40_A 412 GSNERNEALLKRINGRGHIHLVPAKIKD--VYFLRMAICSRFTQSEDMEYSWKEVSAAADEM 471 (475)
T ss_dssp SCHHHHHHHHHHHHHHTSCBCEEEEETT--EEEEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHhCCcEEEEeeEECC--EEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2 1556666777765 455544443 5689999864 7899999999999998764
No 227
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.79 E-value=2e-18 Score=171.20 Aligned_cols=289 Identities=12% Similarity=0.028 Sum_probs=184.4
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHHHHhCCeeeeecCC
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAETDYLRSGLYKWDGD 117 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 117 (360)
+.++++.+|+++|. ++.+++++|++.++..++.+++++||. |+++.++|.++...+.+.|++++.++.+
T Consensus 197 i~eaE~~lA~~fGa-------~~a~~v~nGts~An~~ai~al~~pGD~----VLv~r~~H~S~~~~l~lsGa~pv~v~~~ 265 (715)
T 3n75_A 197 HKEAEQYIARVFNA-------DRSYMVTNGTSTANKIVGMYSAPAGST----ILIDRNCHKSLTHLMMMSDVTPIYFRPT 265 (715)
T ss_dssp HHHHHHHHHHHHTC-------SEEEEESSHHHHHHHHHHHHHCCTTCE----EEEESSCCHHHHHHHHHSCCEEEEECCC
T ss_pred HHHHHHHHHHHhCC-------CCceEECcHHHHHHHHHHHHhCCCCCE----EEECCCccHHHHHHHHHcCCEEEEEecc
Confidence 59999999999995 457888999999999999999999998 9999999999999999999999988754
Q ss_pred cccc----------------cc----CCCee---EEEEcCCCCCCcccch-HHHHHHhhhcCcEEEEeecccCCC-----
Q 018172 118 ANTF----------------DK----NNGAY---IEVVNSPNNPDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ----- 168 (360)
Q Consensus 118 ~~~~----------------~~----~~~~~---~i~~~~p~NPtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~----- 168 (360)
.+.+ +. .+++| ++++++| ||+|.+++ +.+.++|+++ .+++|+||+...
T Consensus 266 ~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~--~livDEAH~~~~~f~~~ 342 (715)
T 3n75_A 266 RNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK--SIHFDSAWVPYTNFSPI 342 (715)
T ss_dssp BCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCS--EEEEECTTCTTGGGSGG
T ss_pred ccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcC--cEEEccccccccccCCc
Confidence 3211 11 23444 8999999 89999998 6777888755 378999998421
Q ss_pred CCcCCCC-----CCcc-EEEeccccccCCCCc-eEEEEeecCHHHHHHHHHHHhh-ccccCChHHHHHHHHHhcccCCCc
Q 018172 169 YTPITGA-----ADHD-IMLFTLSKCTGHAGS-RIGWALVKDTEVARKMTRFIEL-GSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 169 ~~~~~~~-----~~~~-i~~~S~sK~~~~~G~-r~G~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
.+..... .+.+ ++++|+||+++ |+ ..|++++++.-..+.+...... .+.+++.+...++.++++.+..
T Consensus 343 ~~~~~al~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~-- 418 (715)
T 3n75_A 343 YEGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKG-- 418 (715)
T ss_dssp GTTSSTTSSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSH--
T ss_pred cccccccccCcCCCEEEEEEeccccccc--CCCCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHh--
Confidence 1111111 1222 45999999976 33 3588887443122233333332 3445556655555555654431
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCC------cccCCCCC-------------ccccccccc---CCCCCCcccccCCc
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQSGV------FGLPEYPL-------------EYCNFTGKF---TNSHPGFAWLESKE 298 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~~~~~-------------~~~~~~~~~---~~~~~~~~~~~~~~ 298 (360)
...++.++++.++.+++++.|+++++ +.+..+.. .+..|.... ..-++.=+.+.+++
T Consensus 419 -~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~ 497 (715)
T 3n75_A 419 -NAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPG 497 (715)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSC
T ss_pred -hccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCC
Confidence 24455677777777888888777642 22222210 000000000 00000002222221
Q ss_pred -------------hHHHHHHHHhhCeeeeCCCCCCCCCCeEE--EEecCChHHHHHHHHHHHHHHhc
Q 018172 299 -------------DEDCEKLLRAERIMARGGRRFGADAKYAR--VSMLSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 299 -------------~~~~~~~l~~~gI~~~pg~~f~~~~~~~R--~s~~~~~e~~~~~~~~l~~~~~~ 350 (360)
+..+.+.|+++||.+.-.. ..++= +|++.+++++++++++|.++.+.
T Consensus 498 ~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~~d-----~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~ 559 (715)
T 3n75_A 498 MEKDGTMSDFGIPASIVAKYLDEHGIVVEKTG-----PYNLLFLFSIGIDKTKALSLLRALTDFKRA 559 (715)
T ss_dssp BCTTSCBCSSCCCHHHHHHHHHHTTCCCSEEE-----TTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCccccCCCcHHHHHHHHHHCCCEEEecC-----CCcEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 1578888999999876432 22333 34444899999999999988754
No 228
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.79 E-value=2.2e-18 Score=163.14 Aligned_cols=209 Identities=11% Similarity=0.038 Sum_probs=148.9
Q ss_pred cHHHHHHHHHHHhhcCCCCCCCCcEE---EcCChHHHHHHHHHhhcCCCCCCCceEEEeC-CCCCCcHHHH---------
Q 018172 38 VPELAEAINNLHHVVDNAVSDGRHIV---IGTGSTQLYQAALYALSSPGGPEPISVVSAA-PYYSQYPAET--------- 104 (360)
Q Consensus 38 ~~~lr~~la~~~~~~~~~~~~~~~i~---~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~-p~~~~~~~~~--------- 104 (360)
..++++.++++++. + ...+ ++ |+++++..++.+++++||+ |++++ |.|..+...+
T Consensus 67 ~~~l~~~la~~~g~------~-~~~~~i~~~-sGt~Ai~~al~al~~~Gd~----Vl~~~~~~y~~~~~~~~l~g~~~~~ 134 (431)
T 3ht4_A 67 RDTLEKVYADVFGA------E-AGLVRPQII-SGTHAISTALFGILRPGDE----LLYITGKPYDTLEEIVGVRGKGVGS 134 (431)
T ss_dssp HHHHHHHHHHHTTC------S-EECCBTTSC-SHHHHHHHHHHTTCCTTCE----EEECSSSCCTTHHHHTTSSSCSSSC
T ss_pred HHHHHHHHHHHhCC------C-cccccceee-CHHHHHHHHHHHhCCCCCE----EEEeCCCCchhHHHHHhhcccccch
Confidence 37888888888884 2 2222 45 6689999999999999998 99998 9999988655
Q ss_pred -HHhCCeeeeecCCcc------cccc--CCCeeEEEEc-CCCCCCcccch----HHHHHHhhh--cCcEEEEeecccCCC
Q 018172 105 -DYLRSGLYKWDGDAN------TFDK--NNGAYIEVVN-SPNNPDGTIRE----AVLAKVNRS--AEGKLIHDLAYYWPQ 168 (360)
Q Consensus 105 -~~~g~~~~~~~~~~~------~~~~--~~~~~~i~~~-~p~NPtG~~~~----~~~~~~~~~--~~~~li~D~ay~~~~ 168 (360)
+..|++++.++.+.+ .+.. ++++++|+++ +||||+|...+ +.+.++|++ +|+++++|++|..+.
T Consensus 135 ~~~~G~~~~~v~~~~~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~ 214 (431)
T 3ht4_A 135 FKEYNIGYNAVPLTEGGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFI 214 (431)
T ss_dssp SGGGTCEEEECCBCTTSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTS
T ss_pred HHHcCCEEEEeCCCCCCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhc
Confidence 447999999887533 2221 4689999998 58999998876 466788998 999999999998654
Q ss_pred CCcCCCCCCccEEEeccccccCC-CCceEEEEeecCHHHHHHHHHHHhhcccc----CChHHHHHHHHHhcccCCCchhH
Q 018172 169 YTPITGAADHDIMLFTLSKCTGH-AGSRIGWALVKDTEVARKMTRFIELGSIG----VSKESQLRAAKILGIVSDDYPNF 243 (360)
Q Consensus 169 ~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~ 243 (360)
....+...+.+++++|+||.+|. .+...||+++ ++++++.+.......+.+ .+...+.++...+ ..
T Consensus 215 ~~~~~~~~g~Di~~~S~sK~lgg~~~~~GG~v~~-~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l--------~~ 285 (431)
T 3ht4_A 215 EEQEPCHVGADLMAGSLIKNPGGGIVKTGGYIVG-KEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGF--------FL 285 (431)
T ss_dssp SSCCGGGTTCSEEEEETTSGGGTTTCSSCEEEEE-CHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHH--------HH
T ss_pred cCCCccccCCeEEEcCccccCCCCCCCceEEEEe-cHHHHHHHHHHhccCCcccccCccHHHHHHHHhHh--------hh
Confidence 32222334568999999999652 1123399998 899999998755432222 1111122222222 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCC
Q 018172 244 FEYGRRLMSERWNMLRQVIRQSGV 267 (360)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~l~~~~~ 267 (360)
+....++..++.+++.+.|++++.
T Consensus 286 ~~~~~~~~~~~a~~l~~~L~~~g~ 309 (431)
T 3ht4_A 286 APHVAGQALKGAIFTAAFLEKLGM 309 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcC
Confidence 455667778888899999998864
No 229
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.78 E-value=1.4e-18 Score=166.71 Aligned_cols=274 Identities=13% Similarity=0.082 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhc--------C-----------------CC---CCCCceE
Q 018172 39 PELAEAINNLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALS--------S-----------------PG---GPEPISV 90 (360)
Q Consensus 39 ~~lr~~la~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~--------~-----------------~g---d~~~~~v 90 (360)
.++++++++.+...- +. ..++|++++|+++++..+++.+. . +| +. |
T Consensus 109 ~~l~~~la~~l~~~~-~~-~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~----i 182 (472)
T 1ohv_A 109 ENFVEKLRESLLSVA-PK-GMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYS----I 182 (472)
T ss_dssp TTHHHHHHHTGGGGC-CT-TCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCE----E
T ss_pred HHHHHHHHHHHHHhC-CC-CcCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCe----E
Confidence 678888877433211 11 23589999999999999998873 1 34 44 9
Q ss_pred EEeCCCCCCcHHHHH-HhCCee-------------eeecC------------------Ccccccc--CC------CeeEE
Q 018172 91 VSAAPYYSQYPAETD-YLRSGL-------------YKWDG------------------DANTFDK--NN------GAYIE 130 (360)
Q Consensus 91 l~~~p~~~~~~~~~~-~~g~~~-------------~~~~~------------------~~~~~~~--~~------~~~~i 130 (360)
+..+++|..+...+. ..|.+. ..++. |.+.++. ++ ++++|
T Consensus 183 i~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 262 (472)
T 1ohv_A 183 LSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGI 262 (472)
T ss_dssp EEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 999999998876553 323211 12211 0111111 12 68888
Q ss_pred EEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCC-cC--CCCCCcc--EEEeccccccCCCCceEEEEe
Q 018172 131 VVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYT-PI--TGAADHD--IMLFTLSKCTGHAGSRIGWAL 200 (360)
Q Consensus 131 ~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~-~~--~~~~~~~--i~~~S~sK~~~~~G~r~G~~~ 200 (360)
++...+|+||.+.+ +.+.++|+++|+++|+||+|.+.... .. ....+.. .-+.||||.+ +.| ||++
T Consensus 263 ive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~sK~~-l~G---G~~~ 338 (472)
T 1ohv_A 263 IVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKM-MTG---GFFH 338 (472)
T ss_dssp EECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEECGGG-SSE---EEEE
T ss_pred EEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEcccc-ccC---CccC
Confidence 88777888998654 56778999999999999999842221 11 1111211 2345899995 345 7765
Q ss_pred ecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhc----CC-cccCCCCC
Q 018172 201 VKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQS----GV-FGLPEYPL 275 (360)
Q Consensus 201 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~-~~~~~~~~ 275 (360)
++++. .+.......+++.|++++.++.++|+.+.+ +...++++++++++.+.|+++ +. +...
T Consensus 339 --~~~~~-~~~~~~~~~T~~~~~~~~aaa~aal~~~~~------~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~---- 405 (472)
T 1ohv_A 339 --KEEFR-PNAPYRIFNTWLGDPSKNLLLAEVINIIKR------EDLLSNAAHAGKVLLTGLLDLQARYPQFISRV---- 405 (472)
T ss_dssp --CGGGS-CSSSSSSCCSSSSCHHHHHHHHHHHHHHHH------TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEE----
T ss_pred --chhhc-ccccccccCccCccHHHHHHHHHHHHHHHh------CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEee----
Confidence 34432 222233345667899999999888875432 235667777777777777665 21 1101
Q ss_pred cccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEec--CChHHHHHHHHHHHHHHhc
Q 018172 276 EYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARVSML--SREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~--~~~e~~~~~~~~l~~~~~~ 350 (360)
.+.+.|+++++++. ..+.+.|.++||.+.|+. .+++||+++ .++|++++++++|.+++.+
T Consensus 406 ----------~~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 406 ----------RGRGTFCSFDTPDESIRNKLISIARNKGVMLGGCG-----DKSIRFRPTLVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp ----------EEETTEEEEECSSHHHHHHHHHHHHHTTEECEEET-----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ----------cCCceEEEEEeCChhHHHHHHHHHHHCCeEEecCC-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 12344667776542 556667778999999852 569999664 3999999999999999865
No 230
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.62 E-value=3.9e-15 Score=140.87 Aligned_cols=279 Identities=14% Similarity=0.005 Sum_probs=167.9
Q ss_pred CCcEEEcCChHHHHHHHHHhhcCC-CCCCCceEEEeCCCCCCcHHHHHHh------CCeeeeecCC-ccccc----c-CC
Q 018172 59 GRHIVIGTGSTQLYQAALYALSSP-GGPEPISVVSAAPYYSQYPAETDYL------RSGLYKWDGD-ANTFD----K-NN 125 (360)
Q Consensus 59 ~~~i~~t~G~t~~l~~~~~~l~~~-gd~~~~~vl~~~p~~~~~~~~~~~~------g~~~~~~~~~-~~~~~----~-~~ 125 (360)
.+.+.++++++++...+++....- |.. +|+..+.+|......+-.. ......++.+ .+.++ . .+
T Consensus 143 ~~~v~f~~SGsEA~e~AiklAr~~tgr~---~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~nd~~~l~~~l~~~~~ 219 (454)
T 4ao9_A 143 IEQLRFTNSGTEANLMALTAALHFTGRR---KIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYNDAQTARAQIERHGP 219 (454)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHTCC---EEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTTCHHHHHHHHHHTGG
T ss_pred CCEEEEeCchHHHHHHHHHHHHhcccCC---eEEEEeCCcCCccccccccccCccCCCCcccCCCchHHHHHHHHhhcCC
Confidence 458999999999999998877421 222 3888777777643322111 1122222211 11211 1 24
Q ss_pred CeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCCCCCcCC--C--CCCccEEEeccccccCCCCceE
Q 018172 126 GAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWPQYTPIT--G--AADHDIMLFTLSKCTGHAGSRI 196 (360)
Q Consensus 126 ~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~~~~~~~--~--~~~~~i~~~S~sK~~~~~G~r~ 196 (360)
++.+|++.......|.+.+ +.+.++|+++|+++|.||++.+ ...... . .-..+ +.+++|.+| .|+.+
T Consensus 220 ~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG-R~G~~~a~e~~gv~PD--i~t~gK~lg-gG~Pi 295 (454)
T 4ao9_A 220 EIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS-RLAPHGLANKLGIRSD--LTTLGKYIG-GGMSF 295 (454)
T ss_dssp GEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG-GGSTTCHHHHHTCCCS--EEEEEGGGG-TTSSC
T ss_pred ceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC-CCccccchhccCCCCc--EEEeccccC-CCCcc
Confidence 5667777655666888765 4677899999999999999873 111110 0 11123 347789998 88999
Q ss_pred EEEeecCHHHHHHHHHH----HhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcccCC
Q 018172 197 GWALVKDTEVARKMTRF----IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQSGVFGLPE 272 (360)
Q Consensus 197 G~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 272 (360)
|.+++ ..++++.+... ....+++.|+++..++.+.|+.+.+. +..++..+.-...++.|.+.+.+++.+.-..
T Consensus 296 ga~~~-~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~--~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vr 372 (454)
T 4ao9_A 296 GAFGG-RADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTP--EAAGALAERGEALRARLNALCANEGVAMQFT 372 (454)
T ss_dssp EEEEE-CHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCH--HHHHHHHHHHHHHHHHHHHHHHHHTBSCEEE
T ss_pred eeeee-HHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhcc--ChhHHHHHHHHHHHHHHHHHHhhCCCCEEEe
Confidence 99998 89998887532 13356788999999999999877653 5555555444444455555545554322122
Q ss_pred CCCcccccccccCCCCCCcccccCCch---HHHHHHHHhhCeeeeCCCCCCCCCCeEEEEecCChHHHHHHHHHHHHHHh
Q 018172 273 YPLEYCNFTGKFTNSHPGFAWLESKED---EDCEKLLRAERIMARGGRRFGADAKYARVSMLSREEIFNIFLERLSAIQG 349 (360)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~~~~~e~~~~~~~~l~~~~~ 349 (360)
-.|.+..+.- ......++-.+...+. ..+...|.++||++.|. +++.++...++|++|++++++++++.
T Consensus 373 g~G~m~gi~f-~~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~~p~-------~~~~~s~~~T~~dId~~l~al~~~l~ 444 (454)
T 4ao9_A 373 GIGSLMNAHF-VQGDVRSSEDLAAVDGRLRQLLFFHLLNEDIYSSPR-------GFVVLSLPLTDADIDRYVAAIGSFIG 444 (454)
T ss_dssp EETTEEEEES-CCSCCCSGGGGTTCCHHHHHHHHHHHHHTTEECCTT-------CEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred eeceEEEEEE-ecCCCCCHHHHHhhhHHHHHHHHHHHHHCCEEEcCC-------CCEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 2222211100 0000011111111122 44566778899999873 34556665699999999999999998
Q ss_pred chhccC
Q 018172 350 GSISNG 355 (360)
Q Consensus 350 ~~~~~~ 355 (360)
+....+
T Consensus 445 ~~~a~l 450 (454)
T 4ao9_A 445 GHGALL 450 (454)
T ss_dssp HSGGGS
T ss_pred hccccC
Confidence 865433
No 231
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.49 E-value=5.7e-13 Score=126.48 Aligned_cols=269 Identities=12% Similarity=0.048 Sum_probs=168.1
Q ss_pred CCcEEEcCChHHHHHHHHHhhcC-CCCCCCceEEEeCCCCCCcHHHHHHh-CC-------------eeeeecCCc-----
Q 018172 59 GRHIVIGTGSTQLYQAALYALSS-PGGPEPISVVSAAPYYSQYPAETDYL-RS-------------GLYKWDGDA----- 118 (360)
Q Consensus 59 ~~~i~~t~G~t~~l~~~~~~l~~-~gd~~~~~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~----- 118 (360)
.+.+++++++++++..+++.... .|.. +|+.-+.+|......+-.. +- .+..+|...
T Consensus 125 ~~~v~f~~sGsEA~e~AlklAr~~t~r~---~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~ 201 (456)
T 4atq_A 125 AKRTVLFNSGAEAVENAVKVARLATGRD---AVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREE 201 (456)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHCCC---EEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCS
T ss_pred CcEEEEeCChHHHHHHHHHHHhhhhcCC---eEEEEecccCCccccccccccCccccccCCCCccccceecccccccccC
Confidence 34789999999999999887632 1222 4888888888765443322 21 112222110
Q ss_pred ----cccc-------------cCCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCcCC--
Q 018172 119 ----NTFD-------------KNNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTPIT-- 173 (360)
Q Consensus 119 ----~~~~-------------~~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~~~-- 173 (360)
+..+ ...+..++++.--..-.|.+.+ +.+.++|+++|+++|.||++.+. ......
T Consensus 202 ~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~ 281 (456)
T 4atq_A 202 NPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAV 281 (456)
T ss_dssp STTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGG
T ss_pred CCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccc
Confidence 0000 0124556666544555777754 57889999999999999999852 222221
Q ss_pred CC--CCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 174 GA--ADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 174 ~~--~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
.. ..-|+ -+++|.+| .|+.+|.+++ ..++.+.+.......+++.|+.+..++.+.|+.+.+. ...++.++.=
T Consensus 282 e~~gv~PDi--vt~gK~lg-gg~P~~av~~-~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~--~l~~~~~~~g 355 (456)
T 4atq_A 282 DHEGVVPDI--ITMAKGIA-GGLPLSAITG-RADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQH--DLNGRARHIE 355 (456)
T ss_dssp GGTTCCCSE--EEECGGGG-TTSSCEEEEE-EHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHT--THHHHHHHHH
T ss_pred cccCCCCch--hhhhhccc-CcCCceeeEe-cHHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhc--cHHHHHHHHH
Confidence 11 12343 45679998 8999999998 7888888876666678899999999999999876543 4444444443
Q ss_pred HHHHHHHHHHHHhcCCc--ccCCCCCcccccccccCCCCCCcccccCC-------ch---HHHHHHHHhhCeeeeCCCCC
Q 018172 252 SERWNMLRQVIRQSGVF--GLPEYPLEYCNFTGKFTNSHPGFAWLESK-------ED---EDCEKLLRAERIMARGGRRF 319 (360)
Q Consensus 252 ~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~l~~~gI~~~pg~~f 319 (360)
...++.|.+...+++.. .+.. .+++.+.++.+++. +. ..+...+.++|+.+.++..+
T Consensus 356 ~~l~~~L~~l~~~~~~~~~~~v~-----------~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~~ 424 (456)
T 4atq_A 356 ELALGKLRELAAELSAGGGSVVG-----------DIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTCGTY 424 (456)
T ss_dssp HHHHHHHHHHHHHCC-----CEE-----------EEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEECTT
T ss_pred HHHHHHHHHHHHhcccccCCceE-----------EeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEecCCC
Confidence 33344444444443210 0000 11233334444331 11 55777888999999874322
Q ss_pred CCCCCeEEEEe--cCChHHHHHHHHHHHHHHhc
Q 018172 320 GADAKYARVSM--LSREEIFNIFLERLSAIQGG 350 (360)
Q Consensus 320 ~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~ 350 (360)
.+.+||.. ..++|++++++++|.+.++.
T Consensus 425 ---~~~irl~PpL~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 425 ---GNVIRLLPPLVISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp ---SCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 45899974 34999999999999999864
No 232
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.49 E-value=1.6e-12 Score=120.71 Aligned_cols=293 Identities=9% Similarity=0.005 Sum_probs=178.5
Q ss_pred HHHHHHHH-HHHhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCC---C-CCCCceEEEeCCCCCCcHHHHHHhCCeeee
Q 018172 39 PELAEAIN-NLHHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSP---G-GPEPISVVSAAPYYSQYPAETDYLRSGLYK 113 (360)
Q Consensus 39 ~~lr~~la-~~~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~---g-d~~~~~vl~~~p~~~~~~~~~~~~g~~~~~ 113 (360)
..|-+.++ +|+...|.+.. ...++++|+|.++..++.+.+++ | +. ||+|..+|.+....+.+.|++++.
T Consensus 115 ~~ltn~l~ld~L~~~G~~~~--~~~flVnGsTgg~lamilaa~r~~rpg~d~----VIvpRn~HKSv~kAliL~Gl~Pv~ 188 (501)
T 3hl2_A 115 NKITNSLVLDIIKLAGVHTV--ANCFVVPMATGMSLTLCFLTLRHKRPKAKY----IIWPRIDQKSCFKSMITAGFEPVV 188 (501)
T ss_dssp HHHHHHHHHHHHHHTTCTTC--CEEEEESSCHHHHHHHHHHHHHHHCTTCCE----EEEECCCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCC--CcEEEECcHHHHHHHHHHHHcCcccCCCCE----EEEecchHHHHHHHHHHcCCeEEE
Confidence 45555555 57776677643 35899999998877777777654 3 66 999999999999999999999998
Q ss_pred ecCC--cccccc------------CCCeeEEEEcCCCCCCccc-ch-HHHHHHhhhcCcEEEEeecccCCC-C-CcCC--
Q 018172 114 WDGD--ANTFDK------------NNGAYIEVVNSPNNPDGTI-RE-AVLAKVNRSAEGKLIHDLAYYWPQ-Y-TPIT-- 173 (360)
Q Consensus 114 ~~~~--~~~~~~------------~~~~~~i~~~~p~NPtG~~-~~-~~~~~~~~~~~~~li~D~ay~~~~-~-~~~~-- 173 (360)
++.. .+.+.. ..+..++++++|++.-|.+ -+ +++.++|+++|+++++|+||+... + ..++
T Consensus 189 V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~s 268 (501)
T 3hl2_A 189 IENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQ 268 (501)
T ss_dssp ECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHH
T ss_pred EeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHH
Confidence 7642 111111 1245555555554433444 44 788899999999999999998421 1 1111
Q ss_pred -CCCC-ccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHH
Q 018172 174 -GAAD-HDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLM 251 (360)
Q Consensus 174 -~~~~-~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (360)
-..+ .++++.|.+|.+-++ ...|.+...++++++.+..... +.....++......++..- .+.+.+..++.
T Consensus 269 A~~~GrAD~vVqS~HK~llvp-IGG~ii~~~d~e~l~~~~~~yP--Gr~S~Spsldl~~tLL~lG----r~Gy~~ll~e~ 341 (501)
T 3hl2_A 269 GARVGRIDAFVQSLDKNFMVP-VGGAIIAGFNDSFIQEISKMYP--GRASASPSLDVLITLLSLG----SNGYKKLLKER 341 (501)
T ss_dssp HHHHSCCCEEEEEHHHHHCCC-SSCEEEEESCHHHHHHHHHTSC--SCBCSHHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred HHhcCCCcEEEecccccceee-cCceEEEeCCHHHHHHHHHhCC--CCCCCcHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 1233 789999999987544 3334554667888887744321 1112333332333333321 25567777777
Q ss_pred HHHHHHHHHHHHhcCC---cccCCCCCcccccccccCCCCCCcccccCC---c---hHHHHHHHHhhCee----eeCCC-
Q 018172 252 SERWNMLRQVIRQSGV---FGLPEYPLEYCNFTGKFTNSHPGFAWLESK---E---DEDCEKLLRAERIM----ARGGR- 317 (360)
Q Consensus 252 ~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~l~~~gI~----~~pg~- 317 (360)
.++.+++.+.|+++.. ..+...+.- +.+.-+.++.. . ...+-..|-.++|. |.+|.
T Consensus 342 ~ela~~L~~~L~~la~~~ge~ll~~~~n----------~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~ 411 (501)
T 3hl2_A 342 KEMFSYLSNQIKKLSEAYNERLLHTPHN----------PISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSM 411 (501)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCBCCCTTC----------SSEEEEECTTSCTTTSCHHHHHHHHHHHTTCCSCEEECTTCC
T ss_pred HHHHHHHHHHHHHHHHhcChhhcCCCCC----------ceeEEEecccccccccccHHHHHHHHHhcCCCcceeecCCCc
Confidence 7888888888877632 222211100 00001111111 1 14555566666553 34454
Q ss_pred ---------CCCC-----CCCeEEEEecC--ChHHHHHHHHHHHHHHhchhcc
Q 018172 318 ---------RFGA-----DAKYARVSMLS--REEIFNIFLERLSAIQGGSISN 354 (360)
Q Consensus 318 ---------~f~~-----~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~~~ 354 (360)
.||. ...|+-+.-+. +++|++.++++|.+.+.+.++.
T Consensus 412 ~~i~g~~f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~ 464 (501)
T 3hl2_A 412 QTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKE 464 (501)
T ss_dssp EEETTEEESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred eEECCeeecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 4442 34577776544 9999999999999999876543
No 233
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.44 E-value=1.3e-11 Score=117.60 Aligned_cols=262 Identities=12% Similarity=0.081 Sum_probs=162.7
Q ss_pred CcEEEcCChHHHHHHHHHhhc----CCCCCCCceEEEeCCCCCCcHHHHHHh-CCe-----------eeeecCC------
Q 018172 60 RHIVIGTGSTQLYQAALYALS----SPGGPEPISVVSAAPYYSQYPAETDYL-RSG-----------LYKWDGD------ 117 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~----~~gd~~~~~vl~~~p~~~~~~~~~~~~-g~~-----------~~~~~~~------ 117 (360)
+.|.+++++++++..+++... ..|.+...+|+.-..+|......+-.. |-. ...++.+
T Consensus 129 ~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~ 208 (473)
T 4e3q_A 129 GRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYG 208 (473)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHS
T ss_pred cEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccc
Confidence 479999999999999988753 223333345888888887755433322 211 1111111
Q ss_pred -ccc------------ccc------CCCeeEEEEcCCCCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCcC
Q 018172 118 -ANT------------FDK------NNGAYIEVVNSPNNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTPI 172 (360)
Q Consensus 118 -~~~------------~~~------~~~~~~i~~~~p~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~~ 172 (360)
... ++. ..+..+|++.-...-.|.+.+ +.++++|+++|+++|.||++.+. .....
T Consensus 209 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~ 288 (473)
T 4e3q_A 209 EEGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNT 288 (473)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSS
T ss_pred cccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccch
Confidence 000 000 123445565554556777755 57889999999999999999853 22222
Q ss_pred C----CCCCccEEEeccccccCCCC-ceEEEEeecCHHHHHHHHHHH-------hhccccCChHHHHHHHHHhcccCCCc
Q 018172 173 T----GAADHDIMLFTLSKCTGHAG-SRIGWALVKDTEVARKMTRFI-------ELGSIGVSKESQLRAAKILGIVSDDY 240 (360)
Q Consensus 173 ~----~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (360)
. ..-.-+ +.+++|.++ .| +.+|.+++ .+++.+.+.... ...+++.|+++..++.+.|+.+.+.
T Consensus 289 fa~e~~gv~PD--i~t~~K~l~-gG~~Pl~av~~-~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~- 363 (473)
T 4e3q_A 289 WGCVTYDFTPD--AIISSKNLT-AGFFPMGAVIL-GPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNE- 363 (473)
T ss_dssp CHHHHTTCCCS--EEEECGGGG-TTSSCCEEEEE-CHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHS-
T ss_pred hHHHhcCCCCC--hHHhccccc-CCCCCcccccc-cHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccc-
Confidence 1 111223 336679998 66 89999998 899998886532 2356788999999999988866543
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhc---CCcccCCCCCcccccccccCCCCCCcccccC----------Cc----hHHHH
Q 018172 241 PNFFEYGRRLMSERWNMLRQVIRQS---GVFGLPEYPLEYCNFTGKFTNSHPGFAWLES----------KE----DEDCE 303 (360)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~----~~~~~ 303 (360)
..+++.+ +.-+++.+.|+++ +.+. .. ++.+.++-+.+ +. ...+.
T Consensus 364 -~l~~~~~----~~g~~l~~~L~~l~~~~~v~--~v------------RG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~ 424 (473)
T 4e3q_A 364 -GLAENVR----RLAPRFEERLKHIAERPNIG--EY------------RGIGFMWALEAVKDKASKTPFDGNLSVSERIA 424 (473)
T ss_dssp -SHHHHHH----HHHHHHHHHHHHHTTSTTEE--EE------------EEETTEEEEEECSBTTTTBCCCGGGCHHHHHH
T ss_pred -cHHHHHH----HHHHHHHHHHHHHhcCCCee--EE------------eecceEEEEEEecCccccccccccHHHHHHHH
Confidence 4444443 3444455555444 2211 11 12222222221 11 15677
Q ss_pred HHHHhhCeeeeCCCCCCCCCCeEEEEe--cCChHHHHHHHHHHHHHHhch
Q 018172 304 KLLRAERIMARGGRRFGADAKYARVSM--LSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 304 ~~l~~~gI~~~pg~~f~~~~~~~R~s~--~~~~e~~~~~~~~l~~~~~~~ 351 (360)
..+.++|+.++|. .+.+||+. ..++++++++++++.+.+++.
T Consensus 425 ~~~~~~Gll~~~~------g~~i~l~PPL~it~~eid~~~~~l~~al~~v 468 (473)
T 4e3q_A 425 NTCTDLGLICRPL------GQSVVLCPPFILTEAQMDEMFDKLEKALDKV 468 (473)
T ss_dssp HHHHHTTEECEEE------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCcEEEec------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 8888999999873 24788864 449999999999999998764
No 234
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.37 E-value=1.6e-12 Score=131.93 Aligned_cols=200 Identities=17% Similarity=0.063 Sum_probs=129.0
Q ss_pred CeeEEEEcCC-CCCCcccch-----HHHHHHhhhcCcEEEEeecccCC-CCCcCCC----CCCccEEEeccccccCCCC-
Q 018172 126 GAYIEVVNSP-NNPDGTIRE-----AVLAKVNRSAEGKLIHDLAYYWP-QYTPITG----AADHDIMLFTLSKCTGHAG- 193 (360)
Q Consensus 126 ~~~~i~~~~p-~NPtG~~~~-----~~~~~~~~~~~~~li~D~ay~~~-~~~~~~~----~~~~~i~~~S~sK~~~~~G- 193 (360)
++.+|++..- ++..|...+ +.+.++|++||+++|+||++.+. ....... ....+ +.+++|.++ .|
T Consensus 594 ~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PD--iitlsK~L~-gG~ 670 (831)
T 4a0g_A 594 HVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPD--IACFAKLLT-GGM 670 (831)
T ss_dssp EEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCS--EEEECGGGG-TTS
T ss_pred cEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCc--EEEEecccc-cCc
Confidence 3445555543 688888764 46778999999999999999842 2111111 11123 347999998 67
Q ss_pred ceEEEEeecCHHHHHHHHHH------HhhccccCChHHHHHHHHHhcccCCCchhHHHHHH---HHHHH-HHHHHHHHHH
Q 018172 194 SRIGWALVKDTEVARKMTRF------IELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGR---RLMSE-RWNMLRQVIR 263 (360)
Q Consensus 194 ~r~G~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~-~~~~l~~~l~ 263 (360)
+++|++++ ++++++.+... ....+++.|++++.++.++|+.+.+. ...++.+ +.+++ .++.+.+.+.
T Consensus 671 ~Plgav~~-~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~--~l~~~~~~~~~~l~~~l~~~l~~~l~ 747 (831)
T 4a0g_A 671 VPLAVTLA-TDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDP--ETNHNITSQGKTLRELWDEELVQQIS 747 (831)
T ss_dssp SCCEEEEE-CHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCT--TTCTTBCTTSSBBCCCSCHHHHHHHH
T ss_pred cCcEEEEE-CHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 79999999 89999888542 13356788999999999988865432 2222221 11111 1223445566
Q ss_pred hcCCcccCCCCCcccccccccCCCCCCcccccCCc-----------hHHHHHHHHhhCeeeeCCCCCCCCCCeEEEEe--
Q 018172 264 QSGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE-----------DEDCEKLLRAERIMARGGRRFGADAKYARVSM-- 330 (360)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~gI~~~pg~~f~~~~~~~R~s~-- 330 (360)
+++.+.-....|. ++.+.+.+ ...+.+.|.++||+++|+ .+.+||+.
T Consensus 748 ~~~~v~~vrg~Gl--------------~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p~------g~~lrl~pp~ 807 (831)
T 4a0g_A 748 SHSAVQRVVVIGT--------------LFALELKADASNSGYASLYAKSLLIMLREDGIFTRPL------GNVIYLMCGP 807 (831)
T ss_dssp HSTTEEEEEEETT--------------EEEEEEC---------CHHHHHHHHHHHHTTEECCCB------TTEEEEECCT
T ss_pred hCCCceeEeeccc--------------EEEEEEecCccccccchHHHHHHHHHHHHCCcEEEec------CCEEEEECCC
Confidence 6654333222232 33333321 145677788999999984 35899984
Q ss_pred cCChHHHHHHHHHHHHHHhch
Q 018172 331 LSREEIFNIFLERLSAIQGGS 351 (360)
Q Consensus 331 ~~~~e~~~~~~~~l~~~~~~~ 351 (360)
..+++++++++++|.+++++.
T Consensus 808 ~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 808 CTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp TCCHHHHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHHHHHh
Confidence 449999999999999998754
No 235
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.34 E-value=1.3e-10 Score=109.13 Aligned_cols=291 Identities=8% Similarity=-0.030 Sum_probs=166.7
Q ss_pred HHHHHHHHH-HhhcCCCCCCCCcEEEcCChHHHHHHHHHhhcCC----CCCCCceEEEeCCCCCCcHHHHHHhCCeeeee
Q 018172 40 ELAEAINNL-HHVVDNAVSDGRHIVIGTGSTQLYQAALYALSSP----GGPEPISVVSAAPYYSQYPAETDYLRSGLYKW 114 (360)
Q Consensus 40 ~lr~~la~~-~~~~~~~~~~~~~i~~t~G~t~~l~~~~~~l~~~----gd~~~~~vl~~~p~~~~~~~~~~~~g~~~~~~ 114 (360)
.+.+.+..+ +...|.+ .....++++|+|.+...++...+++ ++. |+++..+|.+...++..+|++++.+
T Consensus 98 ~~e~~~~~~~~~~lGlp--~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~----viv~r~aHkSv~kAl~l~Gl~p~~v 171 (450)
T 3bc8_A 98 KITNSLVLNVIKLAGVH--SVASCFVVPMATGMSLTLCFLTLRHKRPKAKY----IIWPRIDQKSCFKSMVTAGFEPVVI 171 (450)
T ss_dssp HHHHHHHHHHHHHHTCT--TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCE----EEEECCCCHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCCC--CCceEEEECCHHHHHHHHHHHHcchhhcCCCE----EEEECCcHHHHHHHHHHcCCeeEEE
Confidence 445555543 3333432 2335688888885555555554433 555 9999999999999999999998877
Q ss_pred cCC---------cccccc----CC-CeeEEEEcCCCC-CCcccch-HHHHHHhhhcCcEEEEeecccCCC--CCcCC-C-
Q 018172 115 DGD---------ANTFDK----NN-GAYIEVVNSPNN-PDGTIRE-AVLAKVNRSAEGKLIHDLAYYWPQ--YTPIT-G- 174 (360)
Q Consensus 115 ~~~---------~~~~~~----~~-~~~~i~~~~p~N-PtG~~~~-~~~~~~~~~~~~~li~D~ay~~~~--~~~~~-~- 174 (360)
+.. .+.++. ++ +.+++++.+|++ .+|.+-+ +.+.++|+++|+++++|+||+... ...++ .
T Consensus 172 ~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a 251 (450)
T 3bc8_A 172 ENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQG 251 (450)
T ss_dssp CCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHH
T ss_pred EeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHH
Confidence 642 111111 12 355666666654 4566666 788889999999999999998421 11111 1
Q ss_pred C--CCccEEEeccccccCCCCceEEEEeecCHHHHHHHHHHHhhccccCChHHHHHHHHHhcccCCCchhHHHHHHHHHH
Q 018172 175 A--ADHDIMLFTLSKCTGHAGSRIGWALVKDTEVARKMTRFIELGSIGVSKESQLRAAKILGIVSDDYPNFFEYGRRLMS 252 (360)
Q Consensus 175 ~--~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 252 (360)
. ...+.++.|.+|.+. .....+++...+++..+.+..... ......++.......+. . . .+.+.+..+...
T Consensus 252 ~~~~~AD~~v~S~HK~l~-a~~~~~~l~~rd~~~~~~~~~~~~--g~~s~SpsL~l~~~l~~-~-G--~~g~~~~i~~~~ 324 (450)
T 3bc8_A 252 ARVGRIDAFVQSLDKNFM-VPVGGAIIAGFNEPFIQDISKMYP--GRASASPSLDVLITLLS-L-G--CSGYRKLLKERK 324 (450)
T ss_dssp HHHSCCCEEEEEHHHHHS-CCSSCEEEEESCHHHHHHHHHHSC--SCBCSHHHHHHHHHHHH-H-H--HHHHHHHHHHHH
T ss_pred hcccCCCEEEECCccCCC-chhccEEEEecCHHHHHHHHHHhh--cCCcccHHHHHHHHHHH-H-H--HHHHHHHHHHHH
Confidence 1 356889999999776 444467776667887777754321 11223334333333232 1 1 144555555556
Q ss_pred HHHHHHHHHHHhcC---CcccCCCCCcccccccccCCCCCCcccccC-----C-chHHHHHHHHhhC---eeeeC-----
Q 018172 253 ERWNMLRQVIRQSG---VFGLPEYPLEYCNFTGKFTNSHPGFAWLES-----K-EDEDCEKLLRAER---IMARG----- 315 (360)
Q Consensus 253 ~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~l~~~g---I~~~p----- 315 (360)
++.+++.+.|++++ +..+...+.- +....+.++. . +...+.-.+...| ..+.+
T Consensus 325 ~~a~~l~~~l~~~~~~~g~~~l~~~~~----------~~~~~~~l~~~~~~~~~D~tkl~i~~~~~g~sG~~v~~~~~~~ 394 (450)
T 3bc8_A 325 EMFVYLSTQLKKLAEAHNERLLQTPHN----------PISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQ 394 (450)
T ss_dssp HHHHHHHHHHHHHHHHTTCCBCCCTTC----------SSEEEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECSCCEE
T ss_pred HHHHHHHHHHHhhHHhcCceecCCccC----------CCcceeecccccccccCCCceeEEEecCCCCccceeeeccccc
Confidence 66777788777765 5544332110 0000111111 1 2233444444433 22321
Q ss_pred ---CC---CCC-----CCCCeEEEEecC--ChHHHHHHHHHHHHHHhchhc
Q 018172 316 ---GR---RFG-----ADAKYARVSMLS--REEIFNIFLERLSAIQGGSIS 353 (360)
Q Consensus 316 ---g~---~f~-----~~~~~~R~s~~~--~~e~~~~~~~~l~~~~~~~~~ 353 (360)
|. .|+ .+..++=+.++. +++++++++++|+++..+.++
T Consensus 395 ~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~ 445 (450)
T 3bc8_A 395 TVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRK 445 (450)
T ss_dssp EETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 11 122 134565555444 899999999999999876554
No 236
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.32 E-value=2.8e-10 Score=105.37 Aligned_cols=258 Identities=13% Similarity=0.080 Sum_probs=162.0
Q ss_pred CChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH--------HHhC--CeeeeecCCcccccc----------CC
Q 018172 66 TGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET--------DYLR--SGLYKWDGDANTFDK----------NN 125 (360)
Q Consensus 66 ~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~--------~~~g--~~~~~~~~~~~~~~~----------~~ 125 (360)
.++++++..++.+|++|||+ |+..+..+.....-- ...| .+.+.+.+|.+.... ..
T Consensus 127 ~SGs~AN~avy~All~PGD~----ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~ 202 (490)
T 3ou5_A 127 YSGSPANLAVYTALLQPHDR----IMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLF 202 (490)
T ss_dssp SSHHHHHHHHHHHHCC-CCC----EECBC----------------------------CBCEETTTTEECHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCCE----EEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhc
Confidence 35688889999999999999 998887766653221 1112 234444444332222 24
Q ss_pred CeeEEEEcCCCCCCcccchHHHHHHhhhcCcEEEEeecccC-----C-CCCcCCCCCCccEEEeccccccCCCCceEEEE
Q 018172 126 GAYIEVVNSPNNPDGTIREAVLAKVNRSAEGKLIHDLAYYW-----P-QYTPITGAADHDIMLFTLSKCTGHAGSRIGWA 199 (360)
Q Consensus 126 ~~~~i~~~~p~NPtG~~~~~~~~~~~~~~~~~li~D~ay~~-----~-~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~ 199 (360)
++|+|+...-.+|.=.- -+.++++|++-|.++++|.+|.. + ...|+. ..+++..|.+|+| +|=|.|.|
T Consensus 203 kPklIi~G~SaY~r~id-~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~---~ADvVTtTTHKTL--rGPrGG~I 276 (490)
T 3ou5_A 203 RPRLIIAGTSAYARLID-YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK---HADIVTTTTHKTL--RGARSGLI 276 (490)
T ss_dssp CCSEEEECCSSCCSCCC-HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG---TCSEEEEESSSTT--CSCSCEEE
T ss_pred CCCeEEECCccCccccC-HHHHHHHHhhcccEEEechhhhhhhhcccccCCccc---cceEEeccccccc--cCCCceEE
Confidence 88999876644432211 16788889999999999999972 2 233442 3689999999997 46677998
Q ss_pred eecCH--------------HHHHHHHHHHhhccccCChHHHHHHHH-HhcccCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 018172 200 LVKDT--------------EVARKMTRFIELGSIGVSKESQLRAAK-ILGIVSDDYPNFFEYGRRLMSERWNMLRQVIRQ 264 (360)
Q Consensus 200 ~~~~~--------------~~~~~l~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 264 (360)
.+.++ ++.+.+.+....+..+.+.+...++.+ ++..... .......+++.++.+.|.+.|.+
T Consensus 277 l~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~---p~fk~Ya~qVv~NAkaLA~~L~~ 353 (490)
T 3ou5_A 277 FYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACT---PMFREYSLQVLKNARAMADALLE 353 (490)
T ss_dssp EEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHS---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHh---HhHHHHHHHHHHHHHHHHHHHHh
Confidence 87432 567778776655555555555555544 3442211 67788888889999999999998
Q ss_pred cCCcccCCCCCcccccccccCCCCCCcccccCCc----hHHHHHHHHhhCeeee----CCCCCCCCCCeEEEEec-----
Q 018172 265 SGVFGLPEYPLEYCNFTGKFTNSHPGFAWLESKE----DEDCEKLLRAERIMAR----GGRRFGADAKYARVSML----- 331 (360)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gI~~~----pg~~f~~~~~~~R~s~~----- 331 (360)
.+ +.+.. |+ ...-.+++++.. +..+.++|.+.||.+. |+..-...+..+||+..
T Consensus 354 ~G-~~vvs--Gg----------TdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtR 420 (490)
T 3ou5_A 354 RG-YSLVS--GG----------TDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSR 420 (490)
T ss_dssp TT-CEEGG--GS----------CSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHT
T ss_pred CC-Ceeec--CC----------CCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhC
Confidence 85 34331 11 011135666643 2889999999999875 44311123568999852
Q ss_pred -CChHHHHHHHHHHHHHHh
Q 018172 332 -SREEIFNIFLERLSAIQG 349 (360)
Q Consensus 332 -~~~e~~~~~~~~l~~~~~ 349 (360)
..++|+++..+.|.+++.
T Consensus 421 G~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 421 QFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp TCCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 278999999998888774
No 237
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=46.39 E-value=86 Score=25.85 Aligned_cols=90 Identities=11% Similarity=0.094 Sum_probs=45.5
Q ss_pred CcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCc-HHHHHHhCCeeeeecCCccccccCCCeeEEEEcCCCCC
Q 018172 60 RHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQY-PAETDYLRSGLYKWDGDANTFDKNNGAYIEVVNSPNNP 138 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~p~NP 138 (360)
..|++..|+.-+... +..|.+.|.. |.+-+|....- ...++..+++++.-+...+.+ .+..+|+. .+++|
T Consensus 32 k~VLVVGgG~va~~k-a~~Ll~~GA~----VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL---~~adLVIa-AT~d~ 102 (223)
T 3dfz_A 32 RSVLVVGGGTIATRR-IKGFLQEGAA----ITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDL---LNVFFIVV-ATNDQ 102 (223)
T ss_dssp CCEEEECCSHHHHHH-HHHHGGGCCC----EEEECSSCCHHHHHHHHTTSCEEECSCCCGGGS---SSCSEEEE-CCCCT
T ss_pred CEEEEECCCHHHHHH-HHHHHHCCCE----EEEECCCCCHHHHHHHHcCCcEEEECCCCHhHh---CCCCEEEE-CCCCH
Confidence 467777777777544 4566666766 77777765432 222333334443222222222 12345543 34443
Q ss_pred CcccchHHHHHHhhhcCcEEE-Eee
Q 018172 139 DGTIREAVLAKVNRSAEGKLI-HDL 162 (360)
Q Consensus 139 tG~~~~~~~~~~~~~~~~~li-~D~ 162 (360)
..++.+...|+ .++++- +|+
T Consensus 103 ---~~N~~I~~~ak-~gi~VNvvD~ 123 (223)
T 3dfz_A 103 ---AVNKFVKQHIK-NDQLVNMASS 123 (223)
T ss_dssp ---HHHHHHHHHSC-TTCEEEC---
T ss_pred ---HHHHHHHHHHh-CCCEEEEeCC
Confidence 23456666787 777754 444
No 238
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=26.95 E-value=91 Score=18.65 Aligned_cols=26 Identities=15% Similarity=0.156 Sum_probs=20.1
Q ss_pred eEEEEecC-ChHHHHHHHHHHHHHHhc
Q 018172 325 YARVSMLS-REEIFNIFLERLSAIQGG 350 (360)
Q Consensus 325 ~~R~s~~~-~~e~~~~~~~~l~~~~~~ 350 (360)
.+|+|+.. +..+.+++...+.++..+
T Consensus 3 rvrisitartkkeaekfaailikvfae 29 (62)
T 2gjh_A 3 RVRISITARTKKEAEKFAAILIKVFAE 29 (62)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecchhHHHHHHHHHHHHHHH
Confidence 58999977 888888888777776654
No 239
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=23.00 E-value=1.1e+02 Score=28.22 Aligned_cols=92 Identities=13% Similarity=0.060 Sum_probs=47.9
Q ss_pred CcEEEcCChHHHHHHHHHhhcCCCCCCCceEEEeCCCCCCcHHHH-HHhCCeeeeecCCccccccCCCeeEEEEcCCCCC
Q 018172 60 RHIVIGTGSTQLYQAALYALSSPGGPEPISVVSAAPYYSQYPAET-DYLRSGLYKWDGDANTFDKNNGAYIEVVNSPNNP 138 (360)
Q Consensus 60 ~~i~~t~G~t~~l~~~~~~l~~~gd~~~~~vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~p~NP 138 (360)
..|++..|+..+...+ ..|.+.|.. |.+-+|....-...+ +..+.+++.=....+.+. +..+|+. .|++|
T Consensus 13 ~~vlVvGgG~va~~k~-~~L~~~ga~----V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~---~~~lVi~-at~~~ 83 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKA-RLLLEAGAR----LTVNALTFIPQFTVWANEGMLTLVEGPFDETLLD---SCWLAIA-ATDDD 83 (457)
T ss_dssp CEEEEECCSHHHHHHH-HHHHHTTBE----EEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGT---TCSEEEE-CCSCH
T ss_pred CEEEEECCCHHHHHHH-HHHHhCcCE----EEEEcCCCCHHHHHHHhcCCEEEEECCCCccccC---CccEEEE-cCCCH
Confidence 3688888888886555 555556765 666666544322111 112344433222222222 2344444 44443
Q ss_pred CcccchHHHHHHhhhcCcEE-EEeec
Q 018172 139 DGTIREAVLAKVNRSAEGKL-IHDLA 163 (360)
Q Consensus 139 tG~~~~~~~~~~~~~~~~~l-i~D~a 163 (360)
..+..+...|+++++++ ++|+.
T Consensus 84 ---~~n~~i~~~a~~~~i~vn~~d~~ 106 (457)
T 1pjq_A 84 ---TVNQRVSDAAESRRIFCNVVDAP 106 (457)
T ss_dssp ---HHHHHHHHHHHHTTCEEEETTCT
T ss_pred ---HHHHHHHHHHHHcCCEEEECCCc
Confidence 13456666677789886 46654
No 240
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=20.72 E-value=1.3e+02 Score=20.97 Aligned_cols=28 Identities=7% Similarity=-0.085 Sum_probs=23.2
Q ss_pred CChHHHHHHHHHHHHHHhchhccCCCCC
Q 018172 332 SREEIFNIFLERLSAIQGGSISNGKHLG 359 (360)
Q Consensus 332 ~~~e~~~~~~~~l~~~~~~~~~~~~~~~ 359 (360)
.++++.++.+++|.+.+..........+
T Consensus 84 ~s~~e~~~Wi~ai~~~~~~~~~~~~~~~ 111 (113)
T 1pls_A 84 AFLEERDAWVRDINKAIKCIEGLEHHHH 111 (113)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred CCHHHHHHHHHHHHHHHhccchhhhhcc
Confidence 4899999999999999988776665544
Done!