Query 018175
Match_columns 360
No_of_seqs 178 out of 364
Neff 4.2
Searched_HMMs 13730
Date Mon Mar 25 11:07:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018175.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018175hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1r31a1 d.58.20.1 (A:111-220) 52.3 6.6 0.00048 30.8 4.1 57 300-356 24-94 (110)
2 d2ihoa2 d.3.1.18 (A:156-293) A 47.3 1.2 8.5E-05 36.3 -1.3 36 185-220 31-71 (138)
3 d1vjna_ d.157.1.4 (A:) Hypothe 37.8 19 0.0014 29.5 5.1 66 156-229 130-200 (209)
4 d1vpqa_ c.1.32.1 (A:) Hypothet 21.7 50 0.0036 28.3 5.0 83 253-342 149-252 (260)
5 d2nyga1 c.140.1.2 (A:2-271) Un 19.6 52 0.0038 28.5 4.7 37 153-193 28-72 (270)
6 d2nn6f2 d.101.1.1 (F:176-270) 13.8 52 0.0038 23.5 2.7 22 336-357 64-85 (95)
7 d1y0ya1 b.49.3.1 (A:73-163) Fr 13.6 35 0.0025 24.9 1.6 16 152-167 8-23 (91)
8 d2fvga1 b.49.3.1 (A:65-148) En 11.4 44 0.0032 24.0 1.6 16 152-167 8-23 (84)
9 d1nb5i_ d.17.1.2 (I:) Cystatin 10.2 1.1E+02 0.0082 23.0 3.6 33 300-332 12-44 (98)
10 d2ilka_ a.26.1.3 (A:) Interleu 9.1 15 0.0011 30.1 -2.2 53 252-305 64-117 (155)
No 1
>d1r31a1 d.58.20.1 (A:111-220) NAD-binding domain of HMG-CoA reductase {Pseudomonas mevalonii [TaxId: 32044]}
Probab=52.25 E-value=6.6 Score=30.77 Aligned_cols=57 Identities=12% Similarity=0.195 Sum_probs=42.0
Q ss_pred cchhHHHHHHHHHHHHHhccc------------CCCCceEEEecccc-hhhH-HHhHHHHHHHHHHhHhhh
Q 018175 300 FSSPILTMGETLVARMKERSV------------NHGGKYISVHLRFE-EVSF-HSAINVVAELLFIVITKL 356 (360)
Q Consensus 300 F~~~I~~Lg~~LV~RmR~~s~------------~~~g~yIALHLRfE-~DMl-a~a~~g~aelfq~~~t~~ 356 (360)
=.++|.+.++.+-..|.++.. ...++|+.+||.|| .|.+ |+..+-|.|-+-....|+
T Consensus 24 ~k~~l~~~an~~~p~m~kRGGG~~di~~r~~~~~~~~~~~~v~l~vdt~DAMGAN~iNt~lE~ia~~le~~ 94 (110)
T d1r31a1 24 RKDEIIELANRKDQLLNSLGGGCRDIEVHTFADTPRGPMLVAHLIVDVRDAMGANTVNTMAEAVAPLMEAI 94 (110)
T ss_dssp THHHHHHHHHTTCHHHHHTTCEEEEEEEEEECCCTTCCEEEEEEEEECTTBCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHhcCCCeeEEEEEEccCCCcCCEEEEEEEEEhHHhhhhHHHHHHHHHHHHHHHHH
Confidence 356788888888888877542 23568999999997 5777 888888888776555543
No 2
>d2ihoa2 d.3.1.18 (A:156-293) Agglutinin MOA {Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]}
Probab=47.28 E-value=1.2 Score=36.34 Aligned_cols=36 Identities=39% Similarity=0.724 Sum_probs=30.4
Q ss_pred cEeecccccccccCCCC----C-CCccCCHHHHHHhccCCc
Q 018175 185 TLVIPNFHYHSIWRDPS----K-FRDIYDEDYFTSVLQNDV 220 (360)
Q Consensus 185 TLVlP~l~~~S~WkD~S----~-F~DIFDvdhFI~sL~~dV 220 (360)
-||||...-+++|+++- + =++|||-|.|--..|..|
T Consensus 31 YLVLp~~~~s~IWk~SGL~~t~~R~~I~D~DdFA~~~KaAv 71 (138)
T d2ihoa2 31 YLVLPNATFTQIWKDSGLPGSKWREQIYDCDDFAIAMKAAV 71 (138)
T ss_dssp EECCCHHHHHHHHHTTTCTTCCCBTTTBCHHHHHHHHHHHH
T ss_pred EEEechHHHHHHHhccCCCCCcccccccccHHHHHHHHHHH
Confidence 39999999999999853 2 479999999998877766
No 3
>d1vjna_ d.157.1.4 (A:) Hypothetical protein TM0207 {Thermotoga maritima [TaxId: 2336]}
Probab=37.79 E-value=19 Score=29.54 Aligned_cols=66 Identities=24% Similarity=0.314 Sum_probs=39.8
Q ss_pred eEEEEecCChhHHHHHHHHHHHHHHHhcCcEeecccccccccCCCCCCCccCCHHHHHHhccC-----CceEeccCchh
Q 018175 156 YISVEANGGLNQQRISICNAVAVAGYLNATLVIPNFHYHSIWRDPSKFRDIYDEDYFTSVLQN-----DVRVVNKIPEY 229 (360)
Q Consensus 156 YL~V~~nGGLNQqR~~IcDAVaVAriLNATLVlP~l~~~S~WkD~S~F~DIFDvdhFI~sL~~-----dVrIVk~LP~~ 229 (360)
.+++.+.|..+ ..--+|+.+|+.|++-.|||- .|+.....| ++=..|.|++.++. ++-.+.++|++
T Consensus 130 va~lpigg~~~---m~~~ea~~~~~~l~pk~viP~----H~~t~~~~~-~~~~~~~f~~~~~~~~~~~~~~~l~~~~~~ 200 (209)
T d1vjna_ 130 VLLVPVGGTYT---IGPKEAKEVADLLNAKVIIPM----HYKTKYLKF-NLLPVDDFLKLFDSYERVGNILELFEKPKE 200 (209)
T ss_dssp EEEEECCSSSS---CCHHHHHHHHHHTTCSEEEEE----SCCCSSCCT-TCCCTHHHHTTSSCCEECCSEEEESSCCCS
T ss_pred EEEEecCCccc---cCHHHHHHHHHHhCCCEEEEe----ccCCccccc-CcCCHHHHHHHhhhhcccCcEEEeccCCCC
Confidence 45555444321 345688999999999999993 232333333 45557888887663 33344555654
No 4
>d1vpqa_ c.1.32.1 (A:) Hypothetical protein TM1631 {Thermotoga maritima [TaxId: 2336]}
Probab=21.75 E-value=50 Score=28.25 Aligned_cols=83 Identities=14% Similarity=0.153 Sum_probs=46.7
Q ss_pred hhHHhhchhhhhccceEEEcCCCccccCCCCchhhhhhchhccccccc---------------------chhHHHHHHHH
Q 018175 253 QFYKDEVLPKLLEERLIRISPFANRLSFDAPPAVQRLRCLANYEALRF---------------------SSPILTMGETL 311 (360)
Q Consensus 253 ~yY~e~VlP~L~k~~VI~l~~f~~RLa~~lP~~iQrLRCrvnf~ALrF---------------------~~~I~~Lg~~L 311 (360)
+|+.+++.-.|++++|+....-...+...+|.. ..+-.++-=+|| .++++++++.+
T Consensus 149 sW~~~~~~~~L~~~~v~~V~~D~p~~~~~~p~~---~~~t~~~~y~RlhGr~~~~~~~~~~~~~~y~Ys~~eL~~~a~~i 225 (260)
T d1vpqa_ 149 SWDREETYEFLRNHGITFVVVDEPKLPGLFPYR---PITTTDYAYFRFHGRNERWFEAEGEERYDYLYSEEELKTLFEDV 225 (260)
T ss_dssp GGCSHHHHHHHHHHTCEEEEEECCCCTTBCCCC---CCCSSSEEEEEECCCCTTTTTCCGGGTTCCCCCHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHcCCEEEEECCCCCCCCCCcc---cccCCCeeEEEEccCCccccccccchhhccCCCHHHHHHHHHHH
Confidence 445566677899999987764444433222211 111122222222 24567666665
Q ss_pred HHHHHhcccCCCCceEEEecccchhhHHHhH
Q 018175 312 VARMKERSVNHGGKYISVHLRFEEVSFHSAI 342 (360)
Q Consensus 312 V~RmR~~s~~~~g~yIALHLRfE~DMla~a~ 342 (360)
.+ +.+ ....-||-++=..+-||..+|.
T Consensus 226 ~~-~~~---~~~~vyv~fnN~~~g~A~~nA~ 252 (260)
T d1vpqa_ 226 VE-LSR---RVKETYVFFNNCYKGQAAINAL 252 (260)
T ss_dssp HH-HHT---TSSEEEEEECCCGGGHHHHHHH
T ss_pred HH-HHh---cCCcEEEEEECCCCccHHHHHH
Confidence 43 222 2234799999999999986664
No 5
>d2nyga1 c.140.1.2 (A:2-271) Uncharacterized protein YokD {Bacillus subtilis [TaxId: 1423]}
Probab=19.59 E-value=52 Score=28.53 Aligned_cols=37 Identities=19% Similarity=0.242 Sum_probs=22.8
Q ss_pred CCceEEEEec--------CChhHHHHHHHHHHHHHHHhcCcEeeccccc
Q 018175 153 SNGYISVEAN--------GGLNQQRISICNAVAVAGYLNATLVIPNFHY 193 (360)
Q Consensus 153 snGYL~V~~n--------GGLNQqR~~IcDAVaVAriLNATLVlP~l~~ 193 (360)
...-|+|+++ ||+.....++-|.| =-+.|||+|.+-.
T Consensus 28 kgd~v~vHssl~~lg~~~~~~~~~i~aL~~~v----G~~GTLvmPtft~ 72 (270)
T d2nyga1 28 KGMTVLVHSSLSSIGWVNGGAVAVIQALIDVV----TEEGTIVMPSQSV 72 (270)
T ss_dssp TTCEEEEEECSGGGCCBTTHHHHHHHHHHHHH----TTTSEEEEECCCT
T ss_pred CcCEEEEEcChHHhCCcCCCHHHHHHHHHHHh----CCCceEEEEeccc
Confidence 4556666654 55555444444432 2578999998865
No 6
>d2nn6f2 d.101.1.1 (F:176-270) Exosome complex exonuclease MTR3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.82 E-value=52 Score=23.54 Aligned_cols=22 Identities=9% Similarity=0.143 Sum_probs=17.1
Q ss_pred hhHHHhHHHHHHHHHHhHhhhe
Q 018175 336 VSFHSAINVVAELLFIVITKLI 357 (360)
Q Consensus 336 DMla~a~~g~aelfq~~~t~~i 357 (360)
.|+..|-+||.++|..+..-|.
T Consensus 64 ~~lela~~g~~~I~~i~~~aL~ 85 (95)
T d2nn6f2 64 EAVRLGLEGCQRLYPVLQQSLV 85 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 5678899999999987765543
No 7
>d1y0ya1 b.49.3.1 (A:73-163) Frv operon protein FrvX {Pyrococcus horikoshii [TaxId: 53953]}
Probab=13.63 E-value=35 Score=24.90 Aligned_cols=16 Identities=38% Similarity=0.827 Sum_probs=14.0
Q ss_pred CCCceEEEEecCChhH
Q 018175 152 ESNGYISVEANGGLNQ 167 (360)
Q Consensus 152 ~snGYL~V~~nGGLNQ 167 (360)
+.||||.|...||.+.
T Consensus 8 ~~~G~l~v~~vGG~~~ 23 (91)
T d1y0ya1 8 EKNGFLRVAPIGGVDP 23 (91)
T ss_dssp CTTSCEEEEEESSCCG
T ss_pred CCCCeEEEEecCCCCh
Confidence 4699999999999874
No 8
>d2fvga1 b.49.3.1 (A:65-148) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]}
Probab=11.44 E-value=44 Score=24.01 Aligned_cols=16 Identities=31% Similarity=0.586 Sum_probs=13.9
Q ss_pred CCCceEEEEecCChhH
Q 018175 152 ESNGYISVEANGGLNQ 167 (360)
Q Consensus 152 ~snGYL~V~~nGGLNQ 167 (360)
+.||||.+.-.||.+.
T Consensus 8 ~~~G~l~~~~vGG~~~ 23 (84)
T d2fvga1 8 EKDGKVSFLPVGGVDP 23 (84)
T ss_dssp CTTSCEEEEEESCCCG
T ss_pred CCCCeEEEEecCCcCc
Confidence 4699999999999765
No 9
>d1nb5i_ d.17.1.2 (I:) Cystatin A (stefin A) {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.20 E-value=1.1e+02 Score=22.96 Aligned_cols=33 Identities=15% Similarity=0.274 Sum_probs=22.8
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCceEEEecc
Q 018175 300 FSSPILTMGETLVARMKERSVNHGGKYISVHLR 332 (360)
Q Consensus 300 F~~~I~~Lg~~LV~RmR~~s~~~~g~yIALHLR 332 (360)
=+++||++.+++-.-+-++..+.-..|-|+..|
T Consensus 12 at~Eiq~I~d~Vk~~le~k~g~~~~~F~av~yk 44 (98)
T d1nb5i_ 12 ATPEIQEIVDKVKPQLEEKTNETYGKLEAVQYK 44 (98)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCCCSCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCcceEEEEEEE
Confidence 368999999999888888765444444444433
No 10
>d2ilka_ a.26.1.3 (A:) Interleukin-10 (cytokine synthesis inhibitory factor, CSIF) {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.10 E-value=15 Score=30.09 Aligned_cols=53 Identities=28% Similarity=0.362 Sum_probs=29.5
Q ss_pred hhhHHhhchhhhhccceEEEcCCCccccCCCCchhhhh-hchhcccccccchhHH
Q 018175 252 IQFYKDEVLPKLLEERLIRISPFANRLSFDAPPAVQRL-RCLANYEALRFSSPIL 305 (360)
Q Consensus 252 ~~yY~e~VlP~L~k~~VI~l~~f~~RLa~~lP~~iQrL-RCrvnf~ALrF~~~I~ 305 (360)
-+||+++|+|.-.+++. .+...-+.|++.+-.=-++| +|+..+++-.=.+.|+
T Consensus 64 L~FYLe~V~p~~~~~~~-~i~~~v~sLan~f~~L~~~L~~C~~~~~c~~~~~~v~ 117 (155)
T d2ilka_ 64 IQFYLEEVMPQAENQDP-DIKAHVNSLGENLKTLRLRLRRCHRFLPCENKSKAVE 117 (155)
T ss_dssp HHHHHHHTHHHHHTTCT-TTHHHHHHHHHHHHHHHHHHHHSTTSSGGGCCCHHHH
T ss_pred HHHHHHHHhcccccCCc-chhhHHHHHHHHHHHHHHHHHhCcccCCCCCccHHHH
Confidence 48999999998865533 22333344554322212333 5887777644444444
Done!