Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>018177
MSEASSSSTHRGSAYLNALTQEIEKKLQRALASPSQRRNLLQELFADIALEVDDRARDII
LSGEEGGICPAEDGIDSRLCFYDVLADHYVRMPESGQRILDLIVQLWSQLFVSHIFALLF
HKWIFEVQLNNDEVLLRYSSALVQGATNVFWIDIQTNSRHFQSLFRYLLEEVALEPARLN
KIPVQVQRDLFLVLSRFIFFYNSVDKLESFLKQFPVFPNAFLVGGSADFFVIEVADQLQK
LKVEPVLLHYLSQIKVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDF
LFPVGQYPRHVISLFFRLLYPWCWPSSCWNFIMSWLKAVLHTLLRVVFSSWEKVRAEKNS

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  018177
        (360 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2168158 - symbol:AT5G59960 "AT5G59960" species...  1421  1.9e-145  1


>TAIR|locus:2168158 [details] [associations]
            symbol:AT5G59960 "AT5G59960" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] GO:GO:0005783 GO:GO:0005634
            EMBL:CP002688 IPI:IPI00544349 RefSeq:NP_568917.1 UniGene:At.20143
            PRIDE:F4JXE8 EnsemblPlants:AT5G59960.1 GeneID:836118
            KEGG:ath:AT5G59960 OMA:IQTNTRH Uniprot:F4JXE8
        Length = 359

 Score = 1421 (505.3 bits), Expect = 1.9e-145, P = 1.9e-145
 Identities = 269/350 (76%), Positives = 308/350 (88%)

Query:     6 SSSTHRGSAYLNALTQEIEKKLQRALASPSQRRNLLQELFADIALEVDDRARDIILSGEE 65
             SSS  R SAYL ALTQEI+KKL RA+ SP+Q RNLLQ+LFADIALEVDDRA+D+ILS EE
Sbjct:     8 SSSFSRRSAYLEALTQEIKKKLTRAVVSPAQTRNLLQDLFADIALEVDDRAKDVILSKEE 67

Query:    66 GGICPAEDGIDSRLCFYDVLADHYVRMPESGQRILDLIVQLWSQLFVSHIFALLFHKWIF 125
               I   E   D  LCF+DVLAD+YV++ E G+ ILDL+VQLWSQ F SHIF+LLFHKW+F
Sbjct:    68 DLITSDEADADGPLCFFDVLADYYVKVSERGKDILDLMVQLWSQSFASHIFSLLFHKWLF 127

Query:   126 EVQLNNDEVLLRYSSALVQGATNVFWIDIQTNSRHFQSLFRYLLEEVALEPARLNKIPVQ 185
             EV+L+N E+LLRYSSALVQGATNVFWIDIQTN+R FQSLFRYLLEEVALE  RL KIP+Q
Sbjct:   128 EVELDNQEILLRYSSALVQGATNVFWIDIQTNTRRFQSLFRYLLEEVALEQIRLKKIPIQ 187

Query:   186 VQRDLFLVLSRFIFFYNSVDKLESFLKQFPVFPNAFLVGGSADFFVIEVADQLQKLKVEP 245
              QR+L+L+LSRFIFFYNSVDKL+SFL+ FP FPNAFL+GG  DF VIE+ DQLQKLKVEP
Sbjct:   188 AQRELYLLLSRFIFFYNSVDKLDSFLRNFPEFPNAFLIGGPGDFLVIELTDQLQKLKVEP 247

Query:   246 VLLHYLSQIKVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVG 305
             VLLHYLSQ+K+LQGMELRMTTSTRLK CLYSFTSPGGPMYPTRAVRHAAWDALD LFPVG
Sbjct:   248 VLLHYLSQMKILQGMELRMTTSTRLKACLYSFTSPGGPMYPTRAVRHAAWDALDSLFPVG 307

Query:   306 QYPRHVISLFFRLLYPWCWPSSCWNFIMSWLKAVLHTLLRVVFSSWEKVR 355
             +YPRH+ISLFFRLLYPW WPSSCWNF++S +KAVL++++R++FS  EK R
Sbjct:   308 RYPRHLISLFFRLLYPWYWPSSCWNFVVSCIKAVLYSIVRLIFSRREKPR 357


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.138   0.426    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      360       360   0.00082  117 3  11 22  0.45    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  622 (66 KB)
  Total size of DFA:  248 KB (2132 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  30.25u 0.19s 30.44t   Elapsed:  00:00:01
  Total cpu time:  30.25u 0.19s 30.44t   Elapsed:  00:00:01
  Start:  Fri May 10 23:04:54 2013   End:  Fri May 10 23:04:55 2013

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