Query 018177
Match_columns 360
No_of_seqs 22 out of 24
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 11:09:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018177.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018177hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2c4ja1 a.45.1.1 (A:86-218) Cl 39.1 16 0.0012 27.2 4.3 62 218-289 59-128 (133)
2 d2qzga1 a.29.14.1 (A:4-91) Unc 31.9 7.7 0.00056 29.6 1.3 43 264-306 4-46 (88)
3 d1lsha1 a.118.4.1 (A:285-620) 26.6 57 0.0042 28.1 6.4 53 264-320 202-254 (336)
4 d1bjfa_ a.39.1.5 (A:) Neurocal 25.6 1.1E+02 0.0084 22.4 7.3 73 18-90 3-87 (181)
5 d1pjqa3 e.37.1.1 (A:114-215) S 25.4 59 0.0043 23.8 5.4 35 13-47 38-72 (102)
6 d2fhea1 a.45.1.1 (A:81-216) Cl 25.1 38 0.0027 25.4 4.3 40 218-257 58-105 (136)
7 d1cb8a1 a.102.3.2 (A:26-335) C 22.3 31 0.0022 30.2 3.7 56 268-340 58-113 (310)
8 d2qsba1 a.29.14.1 (A:2-86) Unc 22.2 13 0.00094 28.2 1.0 39 268-306 6-44 (85)
9 d1cjxa2 d.32.1.3 (A:154-356) 4 21.5 25 0.0018 28.7 2.8 50 47-102 87-138 (203)
10 d1jbob_ a.1.1.3 (B:) Phycocyan 19.3 23 0.0017 29.2 2.0 21 277-298 66-86 (172)
No 1
>d2c4ja1 a.45.1.1 (A:86-218) Class mu GST {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.07 E-value=16 Score=27.23 Aligned_cols=62 Identities=19% Similarity=0.377 Sum_probs=41.5
Q ss_pred CCcccccC---CcchhHHHHHHHhhhhcch-----hHHHHHHHHhhhhcCCccccchhhhHhhhhhccCCCCCCCCCChH
Q 018177 218 PNAFLVGG---SADFFVIEVADQLQKLKVE-----PVLLHYLSQIKVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRA 289 (360)
Q Consensus 218 ~n~~l~gg---~aD~FV~ev~dqL~~iK~E-----~vLlhYL~~~~~lkg~eLr~tT~~RLqacLYSfTsPGgP~Y~tR~ 289 (360)
.|.+++|. -||+.+-++++.+..+..+ |-|..|.+++.-.- .+|+.|-|=--...|.+++.+
T Consensus 59 ~~~~l~G~~~T~aD~~~~~~l~~~~~~~~~~l~~~P~L~~~~~rv~~~P----------~ik~yl~s~~~~~~p~~~~~a 128 (133)
T d2c4ja1 59 KQPWFLGDKITFVDFIAYDVLERNQVFEPSCLDAFPNLKDFISRFEGLE----------KISAYMKSSRFLPRPVFSKMA 128 (133)
T ss_dssp TCSBTTBSSCCHHHHHHHHHHHHHHHHSTTTTTTCHHHHHHHHHHHHSH----------HHHHHHHSTTCCCCCSSCTTC
T ss_pred CCCeeecCCccHHHHHHHHHHHHHHHhCchhhhhCchHHHHHHHHHhCH----------HHHHHHhCcccCCCCCCCccc
Confidence 45688885 5999999999998776433 56667777765443 366666554444566666654
No 2
>d2qzga1 a.29.14.1 (A:4-91) Uncharacterized protein MMP1188 {Methanococcus maripaludis [TaxId: 39152]}
Probab=31.92 E-value=7.7 Score=29.61 Aligned_cols=43 Identities=21% Similarity=0.129 Sum_probs=32.4
Q ss_pred cchhhhHhhhhhccCCCCCCCCCChHHHHHHHHhhhhhcCCCC
Q 018177 264 MTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQ 306 (360)
Q Consensus 264 ~tT~~RLqacLYSfTsPGgP~Y~tR~VR~aA~~~LD~LFP~Gr 306 (360)
+....|+|.|.+=+..--.=.=+||-||++|-++.+.|-=.++
T Consensus 4 ~~~~e~i~~~~~~L~qI~~D~sVPRNIRr~a~~~~~~L~n~~~ 46 (88)
T d2qzga1 4 LSPADKLKNISSMLEEIVEDTTVPRNIRAAADNAKNALHNEEQ 46 (88)
T ss_dssp CCHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTCTTS
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHCCCc
Confidence 4566788888887766644455899999999999998865443
No 3
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=26.63 E-value=57 Score=28.15 Aligned_cols=53 Identities=15% Similarity=0.133 Sum_probs=40.3
Q ss_pred cchhhhHhhhhhccCCCCCCCCCChHHHHHHHHhhhhhcCCCCccHHHHHHHHHhhc
Q 018177 264 MTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLY 320 (360)
Q Consensus 264 ~tT~~RLqacLYSfTsPGgP~Y~tR~VR~aA~~~LD~LFP~Gr~~Rh~VslfFRLLh 320 (360)
+.+--.|..|+-+..+++. -.|..||.+|..||..+ |. ..|+-+.+.+.++++
T Consensus 202 p~~i~~l~~~l~~~~~~~~--~~~~~vR~aAi~Alr~~-~~-~~p~~v~~~l~~i~~ 254 (336)
T d1lsha1 202 PNSIKKIQRFLPGQGKSLD--EYSTRVQAEAIMALRNI-AK-RDPRKVQEIVLPIFL 254 (336)
T ss_dssp GGGHHHHHTTSTTSSSCCC--CSCHHHHHHHHHTTTTG-GG-TCHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHhcccccccc--cccHHHHHHHHHHHHHh-hh-cCcHHHHHHHHHHHc
Confidence 4567889999988876654 26788999999999986 43 568877777776643
No 4
>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}
Probab=25.58 E-value=1.1e+02 Score=22.43 Aligned_cols=73 Identities=12% Similarity=-0.017 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHhcCchhHHHHHHHHHhhh--hhhhchHHH-HhhhcCCCCCCC-C--------cccCCCccchHHHHH
Q 018177 18 ALTQEIEKKLQRALASPSQRRNLLQELFADI--ALEVDDRAR-DIILSGEEGGIC-P--------AEDGIDSRLCFYDVL 85 (360)
Q Consensus 18 ~L~~ei~kkL~~Al~s~~qr~~ll~eLFaDi--al~vDdra~-~~i~~~~~d~Is-~--------~~~~~~~~~cfY~vL 85 (360)
+|+.|+.++|.+......+.-+-+.+.|.|. ...++...- +.+........+ + -+...+|.+.|.|.+
T Consensus 3 ~l~~~~~~~L~~~t~fs~~ei~~l~~~F~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl 82 (181)
T d1bjfa_ 3 KLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFI 82 (181)
T ss_dssp CCCHHHHHHHHHHSSCCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHH
T ss_pred CCCHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHH
Confidence 4678899999999997766677777777665 444554432 333322222211 1 167778888888877
Q ss_pred HHHhh
Q 018177 86 ADHYV 90 (360)
Q Consensus 86 A~yy~ 90 (360)
+---.
T Consensus 83 ~~~~~ 87 (181)
T d1bjfa_ 83 IALSV 87 (181)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65444
No 5
>d1pjqa3 e.37.1.1 (A:114-215) Siroheme synthase CysG, domains 2 and 3 {Salmonella typhimurium [TaxId: 90371]}
Probab=25.41 E-value=59 Score=23.82 Aligned_cols=35 Identities=11% Similarity=0.392 Sum_probs=26.4
Q ss_pred chHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHhh
Q 018177 13 SAYLNALTQEIEKKLQRALASPSQRRNLLQELFAD 47 (360)
Q Consensus 13 s~~~~~L~~ei~kkL~~Al~s~~qr~~ll~eLFaD 47 (360)
-.-+-.+..+...++...+.++.+|+.+++++|.|
T Consensus 38 ~~~l~~~~~~~R~~vk~~~~~~~~Rr~fw~~~~~~ 72 (102)
T d1pjqa3 38 LGQVARYAGQLRARVKKQFATMGERRRFWEKFFVN 72 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHcC
Confidence 34445556666777777788889999999999865
No 6
>d2fhea1 a.45.1.1 (A:81-216) Class alpha GST {Fasciola hepatica [TaxId: 6192]}
Probab=25.13 E-value=38 Score=25.40 Aligned_cols=40 Identities=35% Similarity=0.625 Sum_probs=28.2
Q ss_pred CCcccccC---CcchhHHHHHHHhhhhcch-----hHHHHHHHHhhhh
Q 018177 218 PNAFLVGG---SADFFVIEVADQLQKLKVE-----PVLLHYLSQIKVL 257 (360)
Q Consensus 218 ~n~~l~gg---~aD~FV~ev~dqL~~iK~E-----~vLlhYL~~~~~l 257 (360)
.|.+++|+ -|||.+-++++.+..+..+ |-|.+|.+++.-.
T Consensus 58 ~~~~lvG~~lT~AD~~~f~~l~~~~~~~~~~l~~yP~L~~~~~~v~~~ 105 (136)
T d2fhea1 58 KNPYLRGTSVSHVDFMVYEALDAIRYLEPHCLDHFPNLQQFMSRIEAL 105 (136)
T ss_dssp TCSBTTBSSCCHHHHHHHHHHHHHHHHCTTTTTTCHHHHHHHHHHHTS
T ss_pred cCCcccCCcccchHHHHHHHHHHHHHHCCCcchhchhHHHHHHHHHhC
Confidence 45688886 5999999999998776543 4555666655433
No 7
>d1cb8a1 a.102.3.2 (A:26-335) Chondroitinase AC {Pedobacter heparinus (Flavobacterium heparinum) [TaxId: 984]}
Probab=22.30 E-value=31 Score=30.22 Aligned_cols=56 Identities=13% Similarity=0.178 Sum_probs=44.5
Q ss_pred hhHhhhhhccCCCCCCCCCChHHHHHHHHhhhhhcCCCCccHHHHHHHHHhhccccCcchhHHHHHHHHHHHH
Q 018177 268 TRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWNFIMSWLKAVL 340 (360)
Q Consensus 268 ~RLqacLYSfTsPGgP~Y~tR~VR~aA~~~LD~LFP~Gr~~Rh~VslfFRLLhPyywp~S~wn~i~~~ik~v~ 340 (360)
.||+.=-..++.||++-|.-..|+.+--++||.++... ++.+.-|+|-|-+=+++-
T Consensus 58 ~rl~~mA~AY~~pgs~ly~d~~l~~~I~~al~~~~~~~-----------------~~~~NWW~~eIG~P~~l~ 113 (310)
T d1cb8a1 58 LQLETIIQAYIEKDSHYYGDDKVFDQISKAFKYWYDSD-----------------PKSRNWWHNEIATPQALG 113 (310)
T ss_dssp HHHHHHHHHHHCTTSTTTTCHHHHHHHHHHHHHHHHHC-----------------CCCSSHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcccCCHHHHHHHHHHHHHHHhCC-----------------CCCCCchHHhcccHHHHH
Confidence 57777777778999999999999999999999875422 345778999887765543
No 8
>d2qsba1 a.29.14.1 (A:2-86) Uncharacterized protein Ta0600 {Thermoplasma acidophilum [TaxId: 2303]}
Probab=22.22 E-value=13 Score=28.18 Aligned_cols=39 Identities=15% Similarity=0.166 Sum_probs=27.2
Q ss_pred hhHhhhhhccCCCCCCCCCChHHHHHHHHhhhhhcCCCC
Q 018177 268 TRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQ 306 (360)
Q Consensus 268 ~RLqacLYSfTsPGgP~Y~tR~VR~aA~~~LD~LFP~Gr 306 (360)
.++|.|.+=+..=-.=.=+||-||++|-++.+.|-=.++
T Consensus 6 ~~l~~~~~~L~~I~~D~sVPRNIRr~a~e~~~~L~n~~~ 44 (85)
T d2qsba1 6 NLFNEVMYLLDELSQDITVPKNVRKVAQDSKAKLSQENE 44 (85)
T ss_dssp HHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHTCTTS
T ss_pred HHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHCCCc
Confidence 345666665555433445799999999999999865444
No 9
>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}
Probab=21.49 E-value=25 Score=28.70 Aligned_cols=50 Identities=14% Similarity=0.177 Sum_probs=30.9
Q ss_pred hhhhhhchHHHH--hhhcCCCCCCCCcccCCCccchHHHHHHHHhhhCCcchhhHHHH
Q 018177 47 DIALEVDDRARD--IILSGEEGGICPAEDGIDSRLCFYDVLADHYVRMPESGQRILDL 102 (360)
Q Consensus 47 Dial~vDdra~~--~i~~~~~d~Is~~~~~~~~~~cfY~vLA~yy~~vPe~~~~~l~L 102 (360)
=||+.|||=... .+.+. ++...+. ++-+||+.|+..+...++..+.+..+
T Consensus 87 HIAf~vdDI~aav~~L~~~---Gv~fL~~---pp~~Yy~~l~~~~~~~~~~~~~l~~~ 138 (203)
T d1cjxa2 87 HVAFLTDDLVKTWDALKKI---GMRFMTA---PPDTYYEMLEGRLPDHGEPVDQLQAR 138 (203)
T ss_dssp EEEEEESCHHHHHHHHHHT---TCCBCCC---CCHHHHHTHHHHSTTCCCCHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHHhc---CCccccC---chhhHHHHHHHhhccccchHHHHHHc
Confidence 478888876432 33332 3322211 24599999998888888777776653
No 10
>d1jbob_ a.1.1.3 (B:) Phycocyanin beta subunit {Synechococcus elongatus [TaxId: 32046]}
Probab=19.26 E-value=23 Score=29.18 Aligned_cols=21 Identities=29% Similarity=0.612 Sum_probs=14.6
Q ss_pred cCCCCCCCCCChHHHHHHHHhh
Q 018177 277 FTSPGGPMYPTRAVRHAAWDAL 298 (360)
Q Consensus 277 fTsPGgP~Y~tR~VR~aA~~~L 298 (360)
+|+|||+.|+||.- .|.|+=+
T Consensus 66 l~~~GG~~y~~~r~-~aC~RD~ 86 (172)
T d1jbob_ 66 LIQPGGNAYTNRRM-AACLRDM 86 (172)
T ss_dssp GTSTTSTTCSHHHH-HHHHHHH
T ss_pred ccCCCCCCchHHHH-HHHHHHH
Confidence 58999999998743 2444433
Done!