Your job contains 1 sequence.
>018180
MAADKGKKRRQFLPHNRPVKKKGAYPLRPGIQGFFITCDGGRERQASHEAIYVLDSFYEE
LVHGKGSGVKPAGIPNKPLNKKIVFASSSDDEDDDDNNVGEKEEAVEGEGKDKEGGEDQK
GEGKHSDTCKDDDRSHENLTNKKTDPHDAEKVCSGKEMEAVTAENKEDDKNHESQTNEAE
EPPAKKQCLEAGASKSVNNDKVEEQSIDKLIEAELKELGDKNKRRFINLDSGCNGVAVVQ
MRKIDGDPSPKDIVQHMMTSVASTRKPISRSILRVLPIELACYTSEEEISRAIKPLVAQY
FPLETQSPQKFAVLYEARANSGIDRMKIINAVAKSVPAPHKVDLSNPDKTIVVEIVKDY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018180
(359 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006609 - symbol:AT5G12410 "AT5G12410" speci... 684 4.8e-95 2
UNIPROTKB|F1NY67 - symbol:THUMPD1 "Uncharacterized protei... 218 5.9e-21 2
MGI|MGI:2444479 - symbol:Thumpd1 "THUMP domain containing... 206 1.7e-20 2
RGD|1308854 - symbol:Thumpd1 "THUMP domain containing 1" ... 205 7.1e-20 2
UNIPROTKB|Q24K03 - symbol:THUMPD1 "THUMP domain-containin... 202 8.8e-19 2
UNIPROTKB|I3LLD6 - symbol:THUMPD1 "Uncharacterized protei... 199 1.2e-18 2
UNIPROTKB|E2RBF4 - symbol:THUMPD1 "Uncharacterized protei... 201 2.0e-18 2
UNIPROTKB|Q9NXG2 - symbol:THUMPD1 "THUMP domain-containin... 197 1.3e-17 2
UNIPROTKB|J3KQB0 - symbol:THUMPD1 "THUMP domain-containin... 197 5.0e-17 2
FB|FBgn0035532 - symbol:CG15014 species:7227 "Drosophila ... 176 3.9e-14 2
DICTYBASE|DDB_G0291908 - symbol:DDB_G0291908 "THUMP domai... 177 5.1e-14 2
ZFIN|ZDB-GENE-040426-1805 - symbol:zgc:77221 "zgc:77221" ... 199 8.0e-14 1
SGD|S000003201 - symbol:TAN1 "Putative tRNA acetyltransfe... 148 1.6e-11 2
DICTYBASE|DDB_G0279155 - symbol:DDB_G0279155 species:4468... 136 6.3e-09 3
ASPGD|ASPL0000071779 - symbol:AN4889 species:162425 "Emer... 126 2.6e-08 2
CGD|CAL0003121 - symbol:orf19.7182 species:5476 "Candida ... 125 1.3e-06 2
POMBASE|SPBC25H2.10c - symbol:SPBC25H2.10c "tRNA acetyltr... 122 3.4e-06 2
TAIR|locus:2203033 - symbol:AT1G09290 "AT1G09290" species... 92 0.00013 3
>TAIR|locus:505006609 [details] [associations]
symbol:AT5G12410 "AT5G12410" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006310 "DNA recombination" evidence=RCA] [GO:0006406 "mRNA
export from nucleus" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009086 "methionine biosynthetic process"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0010074
"maintenance of meristem identity" evidence=RCA] [GO:0010162 "seed
dormancy process" evidence=RCA] [GO:0010182 "sugar mediated
signaling pathway" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010332 "response to gamma radiation" evidence=RCA] [GO:0010388
"cullin deneddylation" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0032204 "regulation of telomere maintenance"
evidence=RCA] [GO:0043247 "telomere maintenance in response to DNA
damage" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] [GO:0051604 "protein maturation" evidence=RCA]
InterPro:IPR004114 Pfam:PF02926 PROSITE:PS51165 SMART:SM00981
GO:GO:0005829 EMBL:CP002688 GO:GO:0003723 EMBL:AL592312 KO:K06963
EMBL:AY127011 EMBL:BT001143 IPI:IPI00539731 RefSeq:NP_568274.1
UniGene:At.21767 ProteinModelPortal:Q94CK1 SMR:Q94CK1 STRING:Q94CK1
PRIDE:Q94CK1 EnsemblPlants:AT5G12410.1 GeneID:831116
KEGG:ath:AT5G12410 TAIR:At5g12410 HOGENOM:HOG000078762
InParanoid:Q94CK1 OMA:TVCLIGV PhylomeDB:Q94CK1
ProtClustDB:CLSN2689633 ArrayExpress:Q94CK1 Genevestigator:Q94CK1
Uniprot:Q94CK1
Length = 376
Score = 684 (245.8 bits), Expect = 4.8e-95, Sum P(2) = 4.8e-95
Identities = 138/234 (58%), Positives = 176/234 (75%)
Query: 126 SDTCKDDDRSHENLTNKKTDPHDA-EKVCSGKEMEAVTAENKEDDKNHESQTNEAEEPPA 184
+D + + + E + ++ + A E C K++ +E+DK + Q N +EPP
Sbjct: 121 NDLVNEKEIASEGVNDQVNEKEIASEGSCEVKQLAENETVKEEEDKGN--QKNGGDEPPR 178
Query: 185 KKQCLE-AGASKSVNNDKVEEQSIDKLIEAELKELGDKNKRRFINLDSGCNGVAVVQMRK 243
KK C E A VN + E+SIDKLIEAELKELGDK+KRRF+ LD GCNG+ +QM+K
Sbjct: 179 KKTCTEEANPLAKVNENA--EKSIDKLIEAELKELGDKSKRRFMKLDPGCNGLVFIQMKK 236
Query: 244 IDGDPSPKDIVQHMMTSVASTRKPISRSILRVLPIELACYTSEEEISRAIKPLVAQYFPL 303
DGDPSPK+IVQH MTS A+T+K +SR ILR+LPIE++CY SEEEISRAIKPLV QYFP+
Sbjct: 237 RDGDPSPKEIVQHAMTSAAATKKHMSRFILRLLPIEVSCYPSEEEISRAIKPLVEQYFPI 296
Query: 304 ETQSPQKFAVLYEARANSGIDRMKIINAVAKSVPAPHKVDLSNPDKTIVVEIVK 357
ET++P+KFAVLY ARAN+G+DRMKIIN +AKS+PAPHKVDLSNP+ TIVVEI+K
Sbjct: 297 ETENPRKFAVLYGARANTGLDRMKIINTIAKSIPAPHKVDLSNPEMTIVVEIIK 350
Score = 281 (104.0 bits), Expect = 4.8e-95, Sum P(2) = 4.8e-95
Identities = 52/86 (60%), Positives = 68/86 (79%)
Query: 2 AADKGKKRRQ-FLPHNRPVKKKGAYPLRPGIQGFFITCDGGRERQASHEAIYVLDSFYEE 60
+ D+ KKR+Q + P NRPVKKKG+YPL+PG+QGFFI+CDGGRE QA+ EAI V+DSF+EE
Sbjct: 3 SGDQSKKRKQHYRPQNRPVKKKGSYPLKPGVQGFFISCDGGREFQAAQEAINVIDSFFEE 62
Query: 61 LVHGKGSGVKPAGIPNKPLNKKIVFA 86
L+ G S V P G+ P+NKK+ F+
Sbjct: 63 LIQGTDSKVNP-GLFGNPINKKVTFS 87
Score = 61 (26.5 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 27/126 (21%), Positives = 50/126 (39%)
Query: 161 VTAENKEDDKNHESQTNEAEEPPAK----KQCLEAGASKSVNNDKVEEQSI-DKLIEAEL 215
VT ED+ E ++N EE K K + G + VN ++ + + D++ E E+
Sbjct: 84 VTFSYSEDEDEEEDESNNGEEEENKGDGDKAVVSEGGNDLVNEKEIASEGVNDQVNEKEI 143
Query: 216 KELGDKNKRRFINLDSGCNGVAVVQMRKIDGDPSP-KDIVQHMMTSVASTRKPISRSILR 274
G ++ ++ +K GD P K +A + +SI +
Sbjct: 144 ASEGSCEVKQLAENET-VKEEEDKGNQKNGGDEPPRKKTCTEEANPLAKVNENAEKSIDK 202
Query: 275 VLPIEL 280
++ EL
Sbjct: 203 LIEAEL 208
>UNIPROTKB|F1NY67 [details] [associations]
symbol:THUMPD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004114 Pfam:PF02926 PROSITE:PS51165 SMART:SM00981
GO:GO:0003723 GeneTree:ENSGT00390000002365 OMA:MNERKCT
EMBL:AADN02064630 IPI:IPI00593053 Ensembl:ENSGALT00000003334
Uniprot:F1NY67
Length = 313
Score = 218 (81.8 bits), Expect = 5.9e-21, Sum P(2) = 5.9e-21
Identities = 59/175 (33%), Positives = 101/175 (57%)
Query: 194 SKSVNNDKVEEQSIDKLIEAELK-ELG------DKNKRRFINLDSGCNGVAVVQMRKIDG 246
S S ++ EE+ D EA LK E+G ++ RRF +++SG N V ++ R I+
Sbjct: 83 SGSEREEEREEEDDDDDAEAALKKEVGQIRASTERQLRRFQSVESGANNVVFIRTRGIE- 141
Query: 247 DPSPKDIVQHMMTSVASTRKPISRSILRVLPIELACYTSEEEISRAIKPLVAQYFPLETQ 306
P+++V H++ + +T+K +R ILR+LPI C E++ + + +F +
Sbjct: 142 ---PENLVHHILKDIHTTKKKKTRVILRMLPISGTCKAFLEDMKKYTETFFEPWFKAPNK 198
Query: 307 SPQKFAVLYEARANSGIDRMKIINAVAKSVPA--P-HKVDLSNPDKTIVVEIVKD 358
S F ++Y+AR NS ++R ++I +A V + P +KVDL+NP T+VVEI+K+
Sbjct: 199 ST--FQIVYKARNNSHMNREEVIKELAGIVGSLNPENKVDLNNPQYTVVVEIIKN 251
Score = 64 (27.6 bits), Expect = 5.9e-21, Sum P(2) = 5.9e-21
Identities = 24/72 (33%), Positives = 35/72 (48%)
Query: 2 AADKGKKRRQFLPH-NRPVKKKGAYPLRPGIQGFFITCDGGRERQASHEAIYVLDSFYEE 60
AA K + + F RP + G L G++G ITC+ ER+ EA Y L Y +
Sbjct: 12 AARKRRLKGHFAARAKRP--RGGGRQLEAGMRGILITCNMN-ERKCVGEA-YSLLGEYGD 67
Query: 61 LVHGKGSGVKPA 72
L++G +PA
Sbjct: 68 LLYGPEQLSEPA 79
>MGI|MGI:2444479 [details] [associations]
symbol:Thumpd1 "THUMP domain containing 1" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR004114 Pfam:PF02926 PROSITE:PS51165
SMART:SM00981 MGI:MGI:2444479 GO:GO:0003723 eggNOG:COG1818
GeneTree:ENSGT00390000002365 KO:K06963 CTD:55623 HOVERGEN:HBG053030
OMA:KNNQQVP HOGENOM:HOG000139150 OrthoDB:EOG4P8FJT EMBL:AK032078
EMBL:AK152912 EMBL:BC004776 IPI:IPI00114862 RefSeq:NP_663560.1
UniGene:Mm.26392 ProteinModelPortal:Q99J36 SMR:Q99J36 STRING:Q99J36
PhosphoSite:Q99J36 PaxDb:Q99J36 PRIDE:Q99J36
Ensembl:ENSMUST00000033236 GeneID:233802 KEGG:mmu:233802
UCSC:uc009jlo.1 InParanoid:Q99J36 NextBio:381837 Bgee:Q99J36
CleanEx:MM_THUMPD1 Genevestigator:Q99J36
GermOnline:ENSMUSG00000030942 Uniprot:Q99J36
Length = 350
Score = 206 (77.6 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 53/169 (31%), Positives = 97/169 (57%)
Query: 194 SKSVNNDKVEEQSIDKLIEAELKELGDKNKRRFINLDSGCNGVAVVQMRKIDGDPSPKDI 253
S S D E ++ K + ++K +K RRF +++SG N V ++ I+ P+ +
Sbjct: 86 SGSEGEDDDAEAALKKEV-GDIKASTEKRLRRFQSVESGANNVVFIRTLGIE----PEKL 140
Query: 254 VQHMMTSVASTRKPISRSILRVLPIELACYTSEEEISRAIKPLVAQYFPLETQSPQK--F 311
V H++ + T+K +R ILR+LPI C E++ + + + +F ++P K F
Sbjct: 141 VHHILQDMYKTKKKKTRVILRMLPISGTCKAFLEDMKKYAETFLEPWF----KAPNKGTF 196
Query: 312 AVLYEARANSGIDRMKIINAVAK---SVPAPHKVDLSNPDKTIVVEIVK 357
++Y++R NS ++R ++I +A S+ + +KVDL+NP+ T+VVEI+K
Sbjct: 197 QIVYKSRNNSHMNREEVIKELAGIVGSLNSENKVDLTNPEYTVVVEIIK 245
Score = 87 (35.7 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 3 ADKGKKRRQFLPHNRPVKKKGAYP--LRPGIQGFFITCDGGRERQASHEAIYVLDSFYEE 60
A K K + QFLP R + P L PG+QG ITC+ ER+ EA +L+ + ++
Sbjct: 13 AGKRKGKSQFLPAKRARRGDAGGPRQLEPGLQGILITCNMN-ERKCVEEAYSLLNEYGDD 71
Query: 61 L 61
+
Sbjct: 72 M 72
>RGD|1308854 [details] [associations]
symbol:Thumpd1 "THUMP domain containing 1" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004114 Pfam:PF02926 PROSITE:PS51165 SMART:SM00981
RGD:1308854 GO:GO:0003723 eggNOG:COG1818
GeneTree:ENSGT00390000002365 KO:K06963 CTD:55623 HOVERGEN:HBG053030
OMA:KNNQQVP HOGENOM:HOG000139150 OrthoDB:EOG4P8FJT EMBL:BC087659
IPI:IPI00359917 RefSeq:NP_001009688.1 UniGene:Rn.12345 SMR:Q5M943
STRING:Q5M943 Ensembl:ENSRNOT00000020077 GeneID:309041
KEGG:rno:309041 UCSC:RGD:1308854 InParanoid:Q5M943 NextBio:660052
Genevestigator:Q5M943 Uniprot:Q5M943
Length = 353
Score = 205 (77.2 bits), Expect = 7.1e-20, Sum P(2) = 7.1e-20
Identities = 52/169 (30%), Positives = 97/169 (57%)
Query: 194 SKSVNNDKVEEQSIDKLIEAELKELGDKNKRRFINLDSGCNGVAVVQMRKIDGDPSPKDI 253
S S D E ++ K + ++K +K RRF +++SG N V ++ I+ P+ +
Sbjct: 86 SGSEGEDDDAEAALKKEV-GDIKASTEKRLRRFQSVESGANNVVFIRTLGIE----PEKL 140
Query: 254 VQHMMTSVASTRKPISRSILRVLPIELACYTSEEEISRAIKPLVAQYFPLETQSPQK--F 311
V H++ + T+K +R ILR+LP+ C E++ + + + +F ++P K F
Sbjct: 141 VHHILQDMYKTKKKKTRVILRMLPVSGTCKAFLEDMKKYAETFLEPWF----KAPNKGTF 196
Query: 312 AVLYEARANSGIDRMKIINAVAK---SVPAPHKVDLSNPDKTIVVEIVK 357
++Y++R NS ++R ++I +A S+ + +KVDL+NP+ T+VVEI+K
Sbjct: 197 QIVYKSRNNSHMNREEVIKELAGIVGSLNSENKVDLTNPEYTVVVEIIK 245
Score = 83 (34.3 bits), Expect = 7.1e-20, Sum P(2) = 7.1e-20
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 5 KGKKRRQFLPHNRPVKKKGAYP--LRPGIQGFFITCDGGRERQASHEAIYVLDSFYEEL 61
K K + QFLP R + P L PG+QG ITC+ ER+ EA +L+ + +++
Sbjct: 15 KRKGKSQFLPAKRARRCDAGGPRQLEPGLQGILITCNMN-ERKCVEEAYSLLNEYGDDM 72
>UNIPROTKB|Q24K03 [details] [associations]
symbol:THUMPD1 "THUMP domain-containing protein 1"
species:9913 "Bos taurus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004114 Pfam:PF02926 PROSITE:PS51165 SMART:SM00981
GO:GO:0003723 GeneTree:ENSGT00390000002365 KO:K06963 EMBL:BC114098
IPI:IPI00695352 RefSeq:NP_001039742.1 UniGene:Bt.42788
ProteinModelPortal:Q24K03 SMR:Q24K03 PRIDE:Q24K03
Ensembl:ENSBTAT00000064153 GeneID:524854 KEGG:bta:524854 CTD:55623
HOVERGEN:HBG053030 OMA:KNNQQVP NextBio:20874049 Uniprot:Q24K03
Length = 357
Score = 202 (76.2 bits), Expect = 8.8e-19, Sum P(2) = 8.8e-19
Identities = 53/169 (31%), Positives = 95/169 (56%)
Query: 194 SKSVNNDKVEEQSIDKLIEAELKELGDKNKRRFINLDSGCNGVAVVQMRKIDGDPSPKDI 253
S S D E ++ K + ++K + RRF +++SG N V ++ I+ P+ +
Sbjct: 86 SGSEGEDDDVEAALKKEV-GDIKASTEMRLRRFQSVESGANNVVFIRTLGIE----PEKL 140
Query: 254 VQHMMTSVASTRKPISRSILRVLPIELACYTSEEEISRAIKPLVAQYFPLETQSPQK--F 311
V H++ + T+K +R ILR+LPI C E++ + + + +F ++P K F
Sbjct: 141 VHHILQDIYKTKKKKTRVILRMLPISGTCKAFLEDMKKYAETFLEPWF----KAPNKGTF 196
Query: 312 AVLYEARANSGIDRMKIINAVAK---SVPAPHKVDLSNPDKTIVVEIVK 357
++Y++R NS ++R ++I +A S+ + +KVDLSNP T+VVEI+K
Sbjct: 197 QIVYKSRNNSHMNREEVIKELAGIVGSLNSENKVDLSNPQYTVVVEIIK 245
Score = 77 (32.2 bits), Expect = 8.8e-19, Sum P(2) = 8.8e-19
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 5 KGKKRRQFLPHNRPVKKKGAYP--LRPGIQGFFITCDGGRERQASHEAIYVLDSFYEEL 61
K K + Q++ R + G P L PGIQG ITC+ ER+ EA +L+ + +++
Sbjct: 15 KRKGKAQYVQAKRARRWDGGGPRQLEPGIQGILITCNMN-ERKCVEEAYSLLNEYGDDM 72
>UNIPROTKB|I3LLD6 [details] [associations]
symbol:THUMPD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004114
Pfam:PF02926 PROSITE:PS51165 SMART:SM00981 GO:GO:0003723
GeneTree:ENSGT00390000002365 KO:K06963 CTD:55623 OMA:KNNQQVP
EMBL:FP016068 RefSeq:NP_001231211.1 UniGene:Ssc.31964
Ensembl:ENSSSCT00000024527 GeneID:100512402 KEGG:ssc:100512402
Uniprot:I3LLD6
Length = 359
Score = 199 (75.1 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 52/173 (30%), Positives = 99/173 (57%)
Query: 190 EAGASKSVNNDKVEEQSIDKLIEAELKELGDKNKRRFINLDSGCNGVAVVQMRKIDGDPS 249
+ S+ ++D VE ++ K + ++K + RRF +++SG N V ++ I+
Sbjct: 84 QPSGSEGEDDDDVEA-ALKKEV-GDIKASTEMRLRRFQSVESGANNVVFIRTLGIE---- 137
Query: 250 PKDIVQHMMTSVASTRKPISRSILRVLPIELACYTSEEEISRAIKPLVAQYFPLETQSPQ 309
P+ +V H++ + T+K +R ILR+LPI C E++ + + + +F ++P
Sbjct: 138 PEKLVHHILQDMYKTKKKKTRVILRMLPISGTCKAFLEDMKKYAETFLEPWF----KAPN 193
Query: 310 K--FAVLYEARANSGIDRMKIINAVAK---SVPAPHKVDLSNPDKTIVVEIVK 357
K F ++Y++R NS ++R ++I +A S+ + +KVDL+NP T+VVEI+K
Sbjct: 194 KGTFQIVYKSRNNSHMNREEVIKELAGIVGSLNSENKVDLTNPQYTVVVEIIK 246
Score = 80 (33.2 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 5 KGKKRRQFLPHNRPVKKKGAYP--LRPGIQGFFITCDGGRERQASHEAIYVLDSFYEEL 61
K K + Q+L R + +G P L PG+QG ITC+ ER+ EA +L+ + +++
Sbjct: 15 KRKGKAQYLQAKRARRCEGGGPRQLEPGLQGILITCNMN-ERKCVEEAYSLLNEYGDDM 72
>UNIPROTKB|E2RBF4 [details] [associations]
symbol:THUMPD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004114 Pfam:PF02926 PROSITE:PS51165 SMART:SM00981
GO:GO:0003723 GeneTree:ENSGT00390000002365 KO:K06963 CTD:55623
OMA:KNNQQVP EMBL:AAEX03004472 RefSeq:XP_547104.2
Ensembl:ENSCAFT00000028563 GeneID:489984 KEGG:cfa:489984
Uniprot:E2RBF4
Length = 358
Score = 201 (75.8 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 59/180 (32%), Positives = 100/180 (55%)
Query: 192 GASKSVNNDKVEEQSI--DKLIEAEL-KELGD------KNKRRFINLDSGCNGVAVVQMR 242
G K ++ D+ S D +EA L KE+GD RRF +++SG N V ++
Sbjct: 74 GPEKFMDKDQQPSGSEGEDDDVEAALRKEVGDIKASTEMKLRRFQSVESGANNVVFIRTL 133
Query: 243 KIDGDPSPKDIVQHMMTSVASTRKPISRSILRVLPIELACYTSEEEISRAIKPLVAQYFP 302
I+ P+ +V H++ + T+K +R ILR+LPI C E++ + + + +F
Sbjct: 134 GIE----PEKLVHHILQDMYQTKKKKTRVILRMLPISGTCKAFLEDMKKYAETFLEPWF- 188
Query: 303 LETQSPQK--FAVLYEARANSGIDRMKIINAVAK---SVPAPHKVDLSNPDKTIVVEIVK 357
++P K F ++Y++R NS ++R ++I +A S+ + +KVDLSNP T+VVEI+K
Sbjct: 189 ---KAPNKGTFQIVYKSRNNSHMNREEVIKELAGIVGSLNSENKVDLSNPQYTVVVEIIK 245
Score = 75 (31.5 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 5 KGKKRRQFLPHNRPVKKKGAYP--LRPGIQGFFITCDGGRERQASHEAIYVLDSFYEEL 61
K K + Q++ R + G P L PG+QG ITC+ ER+ EA +L+ + +++
Sbjct: 15 KRKGKAQYVQAKRARRCDGGGPRQLEPGLQGILITCNMN-ERKCVEEAYSLLNEYGDDM 72
>UNIPROTKB|Q9NXG2 [details] [associations]
symbol:THUMPD1 "THUMP domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004114 Pfam:PF02926 PROSITE:PS51165 SMART:SM00981
GO:GO:0003723 eggNOG:COG1818 KO:K06963 CTD:55623 HOVERGEN:HBG053030
EMBL:AK000281 EMBL:BC000448 IPI:IPI00550243 RefSeq:NP_060206.2
UniGene:Hs.741402 PDB:2DIR PDBsum:2DIR ProteinModelPortal:Q9NXG2
SMR:Q9NXG2 IntAct:Q9NXG2 STRING:Q9NXG2 PhosphoSite:Q9NXG2
DMDM:61248576 PaxDb:Q9NXG2 PRIDE:Q9NXG2 DNASU:55623
Ensembl:ENST00000381337 Ensembl:ENST00000396083 GeneID:55623
KEGG:hsa:55623 UCSC:uc002dho.3 GeneCards:GC16M020744
HGNC:HGNC:23807 HPA:HPA027851 neXtProt:NX_Q9NXG2
PharmGKB:PA134983093 HOGENOM:HOG000139150 InParanoid:Q9NXG2
OrthoDB:EOG4P8FJT PhylomeDB:Q9NXG2 ChiTaRS:THUMPD1
EvolutionaryTrace:Q9NXG2 GenomeRNAi:55623 NextBio:60236
ArrayExpress:Q9NXG2 Bgee:Q9NXG2 CleanEx:HS_THUMPD1
Genevestigator:Q9NXG2 GermOnline:ENSG00000066654 Uniprot:Q9NXG2
Length = 353
Score = 197 (74.4 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 52/169 (30%), Positives = 94/169 (55%)
Query: 194 SKSVNNDKVEEQSIDKLIEAELKELGDKNKRRFINLDSGCNGVAVVQMRKIDGDPSPKDI 253
S S D E ++ K + ++K + RRF +++SG N V ++ I+ P+ +
Sbjct: 86 SGSEGEDDDAEAALKKEV-GDIKASTEMRLRRFQSVESGANNVVFIRTLGIE----PEKL 140
Query: 254 VQHMMTSVASTRKPISRSILRVLPIELACYTSEEEISRAIKPLVAQYFPLETQSPQK--F 311
V H++ + T+K +R ILR+LPI C E++ + + + +F ++P K F
Sbjct: 141 VHHILQDMYKTKKKKTRVILRMLPISGTCKAFLEDMKKYAETFLEPWF----KAPNKGTF 196
Query: 312 AVLYEARANSGIDRMKIINAVAKSV---PAPHKVDLSNPDKTIVVEIVK 357
++Y++R NS ++R ++I +A V + +KVDL+NP T+VVEI+K
Sbjct: 197 QIVYKSRNNSHVNREEVIRELAGIVCTLNSENKVDLTNPQYTVVVEIIK 245
Score = 72 (30.4 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 5 KGKKRRQFLPHNRPVKKKGAYPLRPGIQGFFITCDGGRERQASHEAIYVLDSFYEEL 61
KGK + R G L PG+QG ITC+ ER+ EA +L+ + +++
Sbjct: 17 KGKAQYVLAKRARRCDAGGPRQLEPGLQGILITCNMN-ERKCVEEAYSLLNEYGDDM 72
>UNIPROTKB|J3KQB0 [details] [associations]
symbol:THUMPD1 "THUMP domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004114 Pfam:PF02926 PROSITE:PS51165 SMART:SM00981
GO:GO:0003723 EMBL:AC004381 OMA:KNNQQVP HGNC:HGNC:23807
ChiTaRS:THUMPD1 ProteinModelPortal:J3KQB0 Ensembl:ENST00000431224
Uniprot:J3KQB0
Length = 439
Score = 197 (74.4 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 52/169 (30%), Positives = 94/169 (55%)
Query: 194 SKSVNNDKVEEQSIDKLIEAELKELGDKNKRRFINLDSGCNGVAVVQMRKIDGDPSPKDI 253
S S D E ++ K + ++K + RRF +++SG N V ++ I+ P+ +
Sbjct: 172 SGSEGEDDDAEAALKKEV-GDIKASTEMRLRRFQSVESGANNVVFIRTLGIE----PEKL 226
Query: 254 VQHMMTSVASTRKPISRSILRVLPIELACYTSEEEISRAIKPLVAQYFPLETQSPQK--F 311
V H++ + T+K +R ILR+LPI C E++ + + + +F ++P K F
Sbjct: 227 VHHILQDMYKTKKKKTRVILRMLPISGTCKAFLEDMKKYAETFLEPWF----KAPNKGTF 282
Query: 312 AVLYEARANSGIDRMKIINAVAKSV---PAPHKVDLSNPDKTIVVEIVK 357
++Y++R NS ++R ++I +A V + +KVDL+NP T+VVEI+K
Sbjct: 283 QIVYKSRNNSHVNREEVIRELAGIVCTLNSENKVDLTNPQYTVVVEIIK 331
Score = 72 (30.4 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 5 KGKKRRQFLPHNRPVKKKGAYPLRPGIQGFFITCDGGRERQASHEAIYVLDSFYEEL 61
KGK + R G L PG+QG ITC+ ER+ EA +L+ + +++
Sbjct: 103 KGKAQYVLAKRARRCDAGGPRQLEPGLQGILITCNMN-ERKCVEEAYSLLNEYGDDM 158
>FB|FBgn0035532 [details] [associations]
symbol:CG15014 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004114 Pfam:PF02926 PROSITE:PS51165 SMART:SM00981
EMBL:AE014296 GO:GO:0003723 GeneTree:ENSGT00390000002365 KO:K06963
OMA:KNNQQVP EMBL:AY118476 RefSeq:NP_647892.1 UniGene:Dm.31170
ProteinModelPortal:Q9VZD8 SMR:Q9VZD8 STRING:Q9VZD8 PaxDb:Q9VZD8
EnsemblMetazoa:FBtr0073340 GeneID:38533 KEGG:dme:Dmel_CG15014
UCSC:CG15014-RA FlyBase:FBgn0035532 eggNOG:NOG247529
InParanoid:Q9VZD8 OrthoDB:EOG4FBG8T PhylomeDB:Q9VZD8
GenomeRNAi:38533 NextBio:809144 Bgee:Q9VZD8 Uniprot:Q9VZD8
Length = 324
Score = 176 (67.0 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 53/194 (27%), Positives = 98/194 (50%)
Query: 176 TNEAEEPPAKKQCLE-AGASKSVNNDK-----VEEQSID-KLIEAELKELGDKNKRRFIN 228
+ + E P KKQ E AG ++ K + D + A+ +E+ + K RF N
Sbjct: 67 SEKPENEPEKKQPEEGAGGDAGEDDPKPAAGGTSDDDDDLEAAAAKCREMLSQRKMRFQN 126
Query: 229 LDSGCNGVAVVQMRKIDGDPSPKDIVQHMMTSVASTRKPISRSILRVLPIELACYTSEEE 288
+D+ ++ + D P + +H++ +A+T K +SR +LR++PIE+ C + +
Sbjct: 127 VDTNTTNCVFIRTQLED----PVALGKHIINDIATTGKSMSRFVLRLVPIEVVCRANMPD 182
Query: 289 ISRAIKPLVAQYFPLETQSPQKFAVLYEARANSGIDRMKIINAVAKSVPAPH---KVDLS 345
I A L ++F E P + +++ R N I R +II +A+ V + + KVDL
Sbjct: 183 IITAAGELFDKHFLKE---PTSYGIIFNHRYNQQIKRDQIITQLAELVNSKNVGNKVDLK 239
Query: 346 NPDKTIVVEIVKDY 359
K+I+VE+++ +
Sbjct: 240 EAKKSIIVEVLRGW 253
Score = 63 (27.2 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 27 LRPGIQGFFITCDGGRERQASHEAIYVLDSFYEELVHGKGSGVKPAGIPNK 77
L+PG +GFF TC+ E+ E Y L + Y ++++G KP P K
Sbjct: 31 LQPGQRGFFATCNIN-EKACVREC-YNLLNHYADILYGSE---KPENEPEK 76
>DICTYBASE|DDB_G0291908 [details] [associations]
symbol:DDB_G0291908 "THUMP domain-containing protein
1" species:44689 "Dictyostelium discoideum" [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004114 Pfam:PF02926
PROSITE:PS51165 SMART:SM00981 dictyBase:DDB_G0291908 GO:GO:0003723
EMBL:AAFI02000186 eggNOG:NOG320094 RefSeq:XP_629906.1
ProteinModelPortal:Q54DZ0 EnsemblProtists:DDB0184130 GeneID:8628407
KEGG:ddi:DDB_G0291908 InParanoid:Q54DZ0 OMA:FTFGNGR
ProtClustDB:CLSZ2429495 Uniprot:Q54DZ0
Length = 339
Score = 177 (67.4 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 42/163 (25%), Positives = 86/163 (52%)
Query: 199 NDKVEEQSIDKLIEAELKELGDKNKRR--FINLDSGCNGVAVVQMRKIDGDPSPKDIVQH 256
ND ++ +K E EL+++ + + + CNG+A + ++ + + P +
Sbjct: 118 NDNNDDFDFNKAFEQELQQVKETTGKSAPYKKYTLKCNGIAFMAFKE-NSNIDPISLTSR 176
Query: 257 MMTSVASTRKPISRSILRVLPIELACYTSEEEISRAIKPLVAQYFPLETQSPQKFAVLYE 316
+ +++ ++ I R++PI + S + IK L+ +YF + K+ + ++
Sbjct: 177 IFKDCETSKTLKTKEISRLIPISKFIHLSN--MMEEIKILIDKYFCDPIEKIIKYKIEFK 234
Query: 317 ARANSGIDRMKIINAVAKSVPAPHKVDLSNPDKTIVVEIVKDY 359
+R N I++M+ I +AK + HKVDL+NP+ TI++EI+K Y
Sbjct: 235 SRNNEKINKMEYIQEIAKLINPNHKVDLNNPELTIIIEIIKFY 277
Score = 62 (26.9 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 130 KDDDRSHENLTNKKTDPHDAEKVCSGKEMEAVTAENKEDDKNHESQTNEAEEPPAKKQCL 189
K ++ + EN NKK D EK ++ + V ENKE K+ + + E +E + L
Sbjct: 10 KIENENDENDENKKK-LKDNEKEEEEEKKDEVELENKE--KSKKGKKKEEKEESSLPSTL 66
Query: 190 EAGASKSVNNDKV 202
+ SK+V ND +
Sbjct: 67 KP--SKAVLNDPI 77
Score = 49 (22.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 5 KGKKRRQFLPHNRP--VKKKGAYPLRP--GIQGFFITCDGGRERQASHEAIYVLDSFYEE 60
KGKK+ + + P +K A P G G T GRE QA+ + +L+ + E
Sbjct: 50 KGKKKEEKEESSLPSTLKPSKAVLNDPIFGQPGLLFTFGNGREVQATKDLYNLLNEYVNE 109
>ZFIN|ZDB-GENE-040426-1805 [details] [associations]
symbol:zgc:77221 "zgc:77221" species:7955 "Danio
rerio" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR004114 Pfam:PF02926 PROSITE:PS51165
SMART:SM00981 ZFIN:ZDB-GENE-040426-1805 GO:GO:0003723 KO:K06963
HOVERGEN:HBG053030 HOGENOM:HOG000139150 EMBL:BC065594
IPI:IPI00504132 RefSeq:NP_991220.1 UniGene:Dr.85871
ProteinModelPortal:Q6P0J6 SMR:Q6P0J6 GeneID:402955 KEGG:dre:402955
InParanoid:Q6P0J6 NextBio:20816765 Uniprot:Q6P0J6
Length = 353
Score = 199 (75.1 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 63/228 (27%), Positives = 117/228 (51%)
Query: 140 TNKKTDPHDAEKVCSGKEMEAVTAENK--EDDKNHESQTNEAEEPPAK-KQCLEAGASKS 196
T ++ H +K +E+E V A+ + N T+EA ++ L +S
Sbjct: 8 TRRRFGGHAHKKQKGARELE-VGAQGVLITCNMNERKCTSEAFSLLSEYADELYGPEQES 66
Query: 197 VNNDKVEE-QSIDKLIEAELKELGDKNK---RRFINLDSGCNGVAVVQMRKIDGDPSPKD 252
++ D+ +E + ++ E+ +L +K +RF +DSG N V ++ +D P
Sbjct: 67 LSEDEEQEDEDAGCALQREVSQLQSSSKGRQQRFSAVDSGANNVVFIRTHGVD----PAQ 122
Query: 253 IVQHMMTSVASTRKPISRSILRVLPIELACYTSEEEISRAIKPLVAQYFPLETQSPQKFA 312
+V H+++ + TRK SR ILR+LP+ C E++ + + + ++F + F
Sbjct: 123 LVHHILSDLHLTRKRKSRVILRMLPVSATCRAFPEDMQKLLSVFLQRWFLAPRHAT--FQ 180
Query: 313 VLYEARANSGIDRMKIINAVAKSVPA--P-HKVDLSNPDKTIVVEIVK 357
+ ++AR +S R ++I AVA V P +KVDL+NP+ +I++EI+K
Sbjct: 181 ICFKARNSSHSKREEVITAVAGLVGQLNPLNKVDLTNPELSIIIEIIK 228
>SGD|S000003201 [details] [associations]
symbol:TAN1 "Putative tRNA acetyltransferase" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0016746
"transferase activity, transferring acyl groups" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0006400 "tRNA modification" evidence=IMP]
[GO:0016740 "transferase activity" evidence=IEA] InterPro:IPR004114
Pfam:PF02926 PROSITE:PS51165 SMART:SM00981 SGD:S000003201
GO:GO:0005634 GO:GO:0005737 EMBL:BK006941 GO:GO:0003723
GO:GO:0016746 GO:GO:0006400 EMBL:Z72754 PIR:S64254
RefSeq:NP_011282.1 ProteinModelPortal:P53072 SMR:P53072
IntAct:P53072 MINT:MINT-2492386 STRING:P53072 PaxDb:P53072
PeptideAtlas:P53072 EnsemblFungi:YGL232W GeneID:852619
KEGG:sce:YGL232W CYGD:YGL232w eggNOG:COG1818
GeneTree:ENSGT00390000002365 HOGENOM:HOG000065974 KO:K06963
OMA:YKFAVEV OrthoDB:EOG4BZRBX NextBio:971829 Genevestigator:P53072
GermOnline:YGL232W Uniprot:P53072
Length = 289
Score = 148 (57.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 57/191 (29%), Positives = 87/191 (45%)
Query: 177 NEAEEPPAKKQCLEAGASKSVNNDKVEEQSIDKLIEAELKELGDKNKRRFINLDSGCNGV 236
+E+E K +E K + K EE D L E K+ K+ FI+L+ C V
Sbjct: 70 DESENDEKKDLSIEDQIKKELQELKGEETGKD-LSSGETKK---KDPLAFIDLNCEC--V 123
Query: 237 AVVQMRKIDGDPS-PKDIVQHMMTSVASTRKPISRS--ILRVLPIELACYTSEEEISRAI 293
+ RK P P++ V +M +A + + R+ + ++ PI +C E++ +
Sbjct: 124 TFCKTRK----PIVPEEFVLSIMKDLADPKNMVKRTRYVQKLTPITYSCNAKMEQLIKLA 179
Query: 294 KPLVAQYF--PLETQSPQKFAVLYEARANSGIDRMKIINAVAKSVPAP-----HKVDLSN 346
++ +F P + KFAV R + I+RM IIN V K V H VDL N
Sbjct: 180 NLVIGPHFHDPSNVKKNYKFAVEVTRRNFNTIERMDIINQVVKLVNKEGSEFNHTVDLKN 239
Query: 347 PDKTIVVEIVK 357
DK I+VE K
Sbjct: 240 YDKLILVECFK 250
Score = 69 (29.3 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 1 MAADKGKKRRQFLPHNRPVKKKGAYPLRPGIQGFFITCDGGRERQASHEAIYVLDSFYEE 60
M + + + NR K + L PG G + TC ERQA+ E + + ++E
Sbjct: 1 MGEKRNRNGKDANSQNRKKFKVSSGFLDPGTSGIYATCSRRHERQAAQELQLLFEEKFQE 60
Query: 61 L 61
L
Sbjct: 61 L 61
>DICTYBASE|DDB_G0279155 [details] [associations]
symbol:DDB_G0279155 species:44689 "Dictyostelium
discoideum" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004114 Pfam:PF02926 PROSITE:PS51165 SMART:SM00981
dictyBase:DDB_G0279155 GO:GO:0003723 EMBL:AAFI02000027
eggNOG:COG1818 ProtClustDB:CLSZ2429495 RefSeq:XP_641852.1
ProteinModelPortal:Q54X76 EnsemblProtists:DDB0218152 GeneID:8621897
KEGG:ddi:DDB_G0279155 InParanoid:Q54X76 OMA:ELINSGC Uniprot:Q54X76
Length = 451
Score = 136 (52.9 bits), Expect = 6.3e-09, Sum P(3) = 6.3e-09
Identities = 35/111 (31%), Positives = 62/111 (55%)
Query: 249 SPKDIVQHMMTSVASTRKPISRSIL--RVLPIELACYTSEEEISRAIKPLVAQYFPLETQ 306
S K ++++ S+ K ++R I +VLPI SE ++ ++ ++ + F +
Sbjct: 253 STKKMLENANQSIFIADKVLNRVIFTSKVLPILRTFRASEVDMYPIMREVIKENF--KNA 310
Query: 307 SPQKFAVLYEARANSGIDRMKIINAVAKSVPAPHKVDLSNPDKTIVVEIVK 357
+ FA+ +R NS +++ K+I +A+ V KVDLSNPD IV+EI+K
Sbjct: 311 QGKTFAIELRSRNNSSLEKNKVIKDIAEMVDPSIKVDLSNPDLVIVIEIIK 361
Score = 65 (27.9 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 22/89 (24%), Positives = 47/89 (52%)
Query: 128 TCKDDDRSHENLTNKKTDPHDA--EKVCSGKEMEAVTAENKEDDKNHESQTNEAEEPPAK 185
T ++ + EN + +T+ ++ ++ C + +E ENK +KN ++ E+ K
Sbjct: 3 TTENQQATIENNQSLETENNNNNNDETCKKRTLEET--ENK--NKNFVNKKLRKEQK--K 56
Query: 186 KQCLEAGASKSVNNDKVEEQSIDKLIEAE 214
K+ E K++NN + +++++DK E E
Sbjct: 57 KETKENKKQKTLNNQENKKENVDKKDEQE 85
Score = 57 (25.1 bits), Expect = 6.3e-09, Sum P(3) = 6.3e-09
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 185 KKQCLEAGASKSVNNDK-VEEQSIDKLIEAELKELGDKNKRRFINLDSGCNGVAVVQMRK 243
K++ E ++ VN+ EQ + + E EL K ++RF ++SGC G+ + +
Sbjct: 154 KEEKEEEMKTEKVNSYYGTNEQKQEGTTDVEPSEL--KKRKRFELINSGCGGIYFISIPI 211
Query: 244 IDGDP 248
+ DP
Sbjct: 212 ENVDP 216
Score = 44 (20.5 bits), Expect = 6.3e-09, Sum P(3) = 6.3e-09
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 31 IQGFFITCDGGRERQASHEAIYVLDSFYEE 60
++G + CD RE + E + +L+ F ++
Sbjct: 121 VKGLLVCCDSMREANSIGEMLPLLNIFADK 150
Score = 40 (19.1 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 15/63 (23%), Positives = 30/63 (47%)
Query: 128 TCKDDDRSHENLTNKKTDPHDAEKVCS-GKEMEAVT-AENKED-----DKNHESQT--NE 178
T ++ + ++N NKK +K K+ + + ENK++ D+ E+ T N+
Sbjct: 34 TLEETENKNKNFVNKKLRKEQKKKETKENKKQKTLNNQENKKENVDKKDEQEEATTDPND 93
Query: 179 AEE 181
+E
Sbjct: 94 YDE 96
>ASPGD|ASPL0000071779 [details] [associations]
symbol:AN4889 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006400
"tRNA modification" evidence=IEA] InterPro:IPR004114 Pfam:PF02926
PROSITE:PS51165 SMART:SM00981 GO:GO:0003723 EMBL:BN001303
EMBL:AACD01000084 eggNOG:COG1818 KO:K06963 OMA:YKFAVEV
OrthoDB:EOG4BZRBX RefSeq:XP_662493.1 ProteinModelPortal:Q5B3J1
EnsemblFungi:CADANIAT00005514 GeneID:2872684 KEGG:ani:AN4889.2
HOGENOM:HOG000197448 Uniprot:Q5B3J1
Length = 261
Score = 126 (49.4 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 50/162 (30%), Positives = 73/162 (45%)
Query: 200 DKVEEQSIDKLIEAELKELGDKNKRRF--INLDSGCNGVAVVQMRKIDGDPSPKDIVQHM 257
D +E Q I K IE LK K F + D C ++ +R D +P+ +V +
Sbjct: 76 DDIEAQ-IRKEIEG-LKPSTSKKSSLFEAVKFDLPC----IIFVR-FDKSINPEKLVHRI 128
Query: 258 -MTSVASTRKPISRSILRVLPIELACYTSEEEISRAIKPLVAQYFPLETQSPQKFAVLYE 316
+ S AS + SR I R+ P T ++ K ++ F P+K+A+
Sbjct: 129 CLDSHASPEQKRSRYIQRLTPARSIRKTLSVDLPEFAKEMLKAEFH-SGGPPKKYAIRPS 187
Query: 317 ARANSGIDRMKIINAVAKSVPAPHKVDLSNPDKTIVVEIVKD 358
R N DR II VA V H VDL N D I+V+IV++
Sbjct: 188 VRGNKKFDRDTIIKTVADIVGPEHPVDLKNYDLLILVDIVQN 229
Score = 62 (26.9 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 27 LRPGIQGFFITCDGGRERQASHEAIYVLDSFYEEL-VHGKG 66
+ G G F+TC+ GRE + + E V+D F E + + G+G
Sbjct: 28 IETGDWGVFVTCERGRENKCAAE---VIDLFTENVDLPGRG 65
>CGD|CAL0003121 [details] [associations]
symbol:orf19.7182 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006400 "tRNA
modification" evidence=IEA] InterPro:IPR004114 Pfam:PF02926
PROSITE:PS51165 SMART:SM00981 CGD:CAL0003121 GO:GO:0003723
EMBL:AACQ01000089 eggNOG:COG1818 HOGENOM:HOG000065974 KO:K06963
RefSeq:XP_715231.1 RefSeq:XP_889003.1 ProteinModelPortal:Q5A0B3
STRING:Q5A0B3 GeneID:3643115 GeneID:3703965 KEGG:cal:CaO19.7182
KEGG:cal:CaO19_7182 Uniprot:Q5A0B3
Length = 268
Score = 125 (49.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 49/171 (28%), Positives = 88/171 (51%)
Query: 200 DKVEEQSIDKLIEAELKELGD-KNKRRF----INLDSGCNGVAVVQMRKIDGDPSPKDIV 254
DK +E SI+ I+ EL+EL + KN ++ +++D C V + + ID P+ +V
Sbjct: 74 DK-KELSIEDKIKQELQELEESKNSKKELLQPVDVDLECL-VFIKTKKPID----PEVLV 127
Query: 255 QHMMTSVASTRKPISRSILRVLPIELACYTSE----EEISRAIKPLVAQYFPLET-QSPQ 309
+ + + + +R +++PI +C ++ E++ + + ++A++F E Q P
Sbjct: 128 EKLCKECYESGQKTTRYTQKLVPIMDSCSSTGDDPLEKVRQLARKVLARHFHQEKDQKPV 187
Query: 310 KFAVLYEARANSGIDRMKIINAVAKSVPAPH--KVDLSNPDKTIVVEIVKD 358
KFAV R + + II +A+ V H VDL N DK I+VE K+
Sbjct: 188 KFAVQVSRRNFNVLKSDVIIKTIAECVGNSHGHSVDLKNYDKLIIVECYKN 238
Score = 47 (21.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 9 RRQFLPHNRPVKKKG---AYPLRPGIQGFFITCDGGRERQASHEAIYVL 54
+R+ N P KKK + L P G +++C +E E + +L
Sbjct: 3 KRKAADSNNPPKKKFKNVSKLLDPNTSGIYVSCARRKEANCRQELLNLL 51
>POMBASE|SPBC25H2.10c [details] [associations]
symbol:SPBC25H2.10c "tRNA acetyltransferase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006400 "tRNA
modification" evidence=ISO] [GO:0051391 "tRNA acetylation"
evidence=ISS] [GO:0051392 "tRNA N-acetyltransferase activity"
evidence=ISS] InterPro:IPR004114 Pfam:PF02926 PROSITE:PS51165
SMART:SM00981 PomBase:SPBC25H2.10c GO:GO:0005634 GO:GO:0005737
EMBL:CU329671 GO:GO:0003723 eggNOG:COG1818 OMA:YKFAVEV
OrthoDB:EOG4BZRBX GO:GO:0051392 GO:GO:0051391 PIR:T40005
RefSeq:NP_001018836.1 ProteinModelPortal:P87151
EnsemblFungi:SPBC25H2.10c.1 GeneID:3361329 KEGG:spo:SPBC25H2.10c
NextBio:20811399 Uniprot:P87151
Length = 287
Score = 122 (48.0 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 47/173 (27%), Positives = 81/173 (46%)
Query: 190 EAGASKSVNNDKVEEQSIDKLIEAELKELGDKNKRRFIN---LDSGCNGVAVVQMRK-ID 245
E +S N ++ EE ++ + E+ L KNK+ + LD C V V+ R ID
Sbjct: 69 ETQSSDQENEEEGEE--LEDAVAKEINSLQKKNKKELLTPIMLDMPC--VYFVKTRPPID 124
Query: 246 GDPSPKDIVQHMMTSVASTRKPISRSILRVLPIELACYTSEEEISRAIKPLVAQYFPLET 305
P +V+ V T+K ++R R++PI S +++ K L+ F
Sbjct: 125 ----PVRLVE-FTCEVGKTKK-MTRYTQRLIPIVRTTGVSLDDLEELAKSLIDPLFHEGQ 178
Query: 306 QSPQKFAVLYEARANSGIDRMKIINAVAKSVPAPHKVDLSNPDKTIVVEIVKD 358
+ ++FAV R ++ + + I VA+ V H VDL N I+V+++K+
Sbjct: 179 EGIKEFAVQANIRNHTVLKKDDIYRTVARIVGKQHMVDLKNFKLLILVQVIKN 231
Score = 48 (22.0 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 28 RPGIQ----GFFITCDGGRERQASHEAIYVLDSFYEEL 61
R GI+ G +T G+ERQ+S E +LD F + +
Sbjct: 29 RTGIEKNESGVLVTVPRGKERQSSSE---ILDVFTQHI 63
>TAIR|locus:2203033 [details] [associations]
symbol:AT1G09290 "AT1G09290" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 UniGene:At.42232 EMBL:AY035155
IPI:IPI00542417 RefSeq:NP_172400.2 ProteinModelPortal:Q7XBQ8
PaxDb:Q7XBQ8 PRIDE:Q7XBQ8 EnsemblPlants:AT1G09290.1 GeneID:837450
KEGG:ath:AT1G09290 eggNOG:NOG297884 OMA:QWCHRIF
ProtClustDB:CLSN2680693 Genevestigator:Q7XBQ8 Uniprot:Q7XBQ8
Length = 348
Score = 92 (37.4 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 36/157 (22%), Positives = 68/157 (43%)
Query: 172 HESQTNEAEEPPAKKQ--CL---EAGASKSV--NNDKVEEQSIDKLIEAELKELGDKNKR 224
HE + +KKQ C E G K+V ND ++E + +E +LK L ++
Sbjct: 91 HEEKPEVLNSTASKKQKVCAQETEEGGEKTVPLENDALQETGENPNVE-DLK-LANEEHN 148
Query: 225 RFINLDSGCNGVAVVQMRKIDGDPSPKDIVQHMMTSVASTRKPISRSILRVLPIELACYT 284
++L ++ ++ P+ +IV + S+ S R+ P++ C
Sbjct: 149 SLMSLVKLTKSGLLLFTFPVENSPNTTNIVSRVFQSMESGALKAPIWCHRIFPVQATCGL 208
Query: 285 SEEEISRAIKPLVAQYFPLETQS---PQKFAVLYEAR 318
+E+E+ + LV ++ + + P KFA Y+ R
Sbjct: 209 TEKELRETVSKLVQRFVNDKDNTLSKPVKFAAGYQRR 245
Score = 53 (23.7 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 33 GFFITCDGGRERQASHEAIYVLDSF 57
GF +TC+ RE+ A+ E + +L +
Sbjct: 62 GFLVTCNIKREKSATKEVMSILGKY 86
Score = 51 (23.0 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 323 IDRMKIINAVAKSVP--APHKV-DLSNPDKTIVVEIV 356
+DR+K VA V P V DL +P+ ++VE++
Sbjct: 268 LDRIKCFETVAAGVKDIVPDSVVDLKSPELCVLVELL 304
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.130 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 359 323 0.00086 116 3 11 23 0.47 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 579 (62 KB)
Total size of DFA: 201 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.27u 0.16s 35.43t Elapsed: 00:00:01
Total cpu time: 35.28u 0.16s 35.44t Elapsed: 00:00:01
Start: Fri May 10 23:16:52 2013 End: Fri May 10 23:16:53 2013